RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy11059
(429 letters)
>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 52.0 bits (125), Expect = 6e-10
Identities = 20/39 (51%), Positives = 26/39 (66%)
Query: 347 VDFDECLSNPCFNGATCQNKINGYTCVCAPGYSGKECSI 385
VD D+C SNPC NG +C++ IN Y C C G+ GK C +
Sbjct: 1 VDGDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCEL 39
Score = 47.7 bits (114), Expect = 2e-08
Identities = 16/38 (42%), Positives = 28/38 (73%)
Query: 385 ININECESSPCLHGATCIDEVATFSCVCPKGLTGRLCE 422
++ ++CES+PCL+G +C D++ ++ C CP G G+ CE
Sbjct: 1 VDGDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCE 38
Score = 30.4 bits (69), Expect = 0.028
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 260 DPCKH-GSCVDKRAGYFCDCPPTYGGKNCSV 289
+PC + GSC D Y C CP + GKNC +
Sbjct: 9 NPCLNGGSCKDDINSYECWCPFGFEGKNCEL 39
Score = 28.1 bits (63), Expect = 0.18
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 5/36 (13%)
Query: 297 PDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICE 332
+ CLNGG+CK + + + C CP G+ GK CE
Sbjct: 8 SNPCLNGGSCK-----DDINSYECWCPFGFEGKNCE 38
Score = 26.6 bits (59), Expect = 0.72
Identities = 12/29 (41%), Positives = 13/29 (44%)
Query: 133 EIGDCSSNPCLNDGVCVDVYKGRYCELPE 161
+ C SNPCLN G C D C P
Sbjct: 2 DGDQCESNPCLNGGSCKDDINSYECWCPF 30
Score = 25.8 bits (57), Expect = 1.2
Identities = 12/25 (48%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
Query: 72 PCLNGATCRPQLTEQLYECVCPPGY 96
PCLNG +C+ + YEC CP G+
Sbjct: 10 PCLNGGSCKDDINS--YECWCPFGF 32
Score = 25.0 bits (55), Expect = 2.3
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 189 EIRDCTSNPCLNDGVCVDEV 208
+ C SNPCLN G C D++
Sbjct: 2 DGDQCESNPCLNGGSCKDDI 21
Score = 24.6 bits (54), Expect = 3.2
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 161 EIGDCSSNPCLNDGVCVD 178
+ C SNPCLN G C D
Sbjct: 2 DGDQCESNPCLNGGSCKD 19
Score = 24.2 bits (53), Expect = 5.2
Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Query: 15 QRNPCQNGGKCNEDETGNYDCTC 37
+ NPC NGG C D+ +Y+C C
Sbjct: 7 ESNPCLNGGSCK-DDINSYECWC 28
>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo
sapiens) [TaxId: 9606]}
Length = 39
Score = 50.5 bits (121), Expect = 2e-09
Identities = 14/37 (37%), Positives = 22/37 (59%)
Query: 350 DECLSNPCFNGATCQNKINGYTCVCAPGYSGKECSIN 386
D+C ++PC N C++ + YTC C G+ GK C +
Sbjct: 1 DQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELF 37
Score = 46.6 bits (111), Expect = 5e-08
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 388 NECESSPCLHGATCIDEVATFSCVCPKGLTGRLCETN 424
++CE+SPC + C D + ++C C +G G+ CE
Sbjct: 1 DQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELF 37
Score = 30.4 bits (69), Expect = 0.028
Identities = 12/32 (37%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 260 DPCKH-GSCVDKRAGYFCDCPPTYGGKNCSVE 290
PC++ G C D Y C C + GKNC +
Sbjct: 6 SPCQNQGKCKDGLGEYTCTCLEGFEGKNCELF 37
Score = 27.7 bits (62), Expect = 0.27
Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 5/36 (13%)
Query: 297 PDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICE 332
C N G CK + + CTC G+ GK CE
Sbjct: 5 TSPCQNQGKCK-----DGLGEYTCTCLEGFEGKNCE 35
Score = 26.2 bits (58), Expect = 0.91
Identities = 9/26 (34%), Positives = 11/26 (42%)
Query: 136 DCSSNPCLNDGVCVDVYKGRYCELPE 161
C ++PC N G C D C E
Sbjct: 2 QCETSPCQNQGKCKDGLGEYTCTCLE 27
Score = 25.8 bits (57), Expect = 1.2
Identities = 10/25 (40%), Positives = 12/25 (48%), Gaps = 2/25 (8%)
Query: 72 PCLNGATCRPQLTEQLYECVCPPGY 96
PC N C+ L E Y C C G+
Sbjct: 7 PCQNQGKCKDGLGE--YTCTCLEGF 29
Score = 24.7 bits (54), Expect = 2.9
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 192 DCTSNPCLNDGVCVDEV 208
C ++PC N G C D +
Sbjct: 2 QCETSPCQNQGKCKDGL 18
Score = 24.7 bits (54), Expect = 3.3
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 164 DCSSNPCLNDGVCVD 178
C ++PC N G C D
Sbjct: 2 QCETSPCQNQGKCKD 16
Score = 24.3 bits (53), Expect = 3.8
Identities = 13/23 (56%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Query: 15 QRNPCQNGGKCNEDETGNYDCTC 37
+ +PCQN GKC D G Y CTC
Sbjct: 4 ETSPCQNQGKCK-DGLGEYTCTC 25
>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein
1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 39
Score = 50.4 bits (121), Expect = 2e-09
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 350 DECLSNPCFNGATCQNKINGYTCVCAPGYSGKECSIN 386
+EC+SNPC N ATC ++I + C+C PGY G C +N
Sbjct: 2 NECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEVN 38
Score = 49.3 bits (118), Expect = 6e-09
Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 387 INECESSPCLHGATCIDEVATFSCVCPKGLTGRLCETN 424
+NEC S+PC + ATC+D++ F C+C G G CE N
Sbjct: 1 VNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEVN 38
Score = 30.4 bits (69), Expect = 0.029
Identities = 11/31 (35%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 260 DPCKHG-SCVDKRAGYFCDCPPTYGGKNCSV 289
+PC++ +C+D+ + C C P Y G +C V
Sbjct: 7 NPCQNDATCLDQIGEFQCICMPGYEGVHCEV 37
Score = 26.6 bits (59), Expect = 0.60
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 134 IGDCSSNPCLNDGVCVDVYKGRYCELPE 161
+ +C SNPC ND C+D C
Sbjct: 1 VNECVSNPCQNDATCLDQIGEFQCICMP 28
Score = 25.8 bits (57), Expect = 1.2
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 190 IRDCTSNPCLNDGVCVDEV 208
+ +C SNPC ND C+D++
Sbjct: 1 VNECVSNPCQNDATCLDQI 19
Score = 25.4 bits (56), Expect = 1.6
Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Query: 72 PCLNGATCRPQLTEQLYECVCPPGY 96
PC N ATC Q+ E ++C+C PGY
Sbjct: 8 PCQNDATCLDQIGE--FQCICMPGY 30
Score = 25.4 bits (56), Expect = 1.8
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 162 IGDCSSNPCLNDGVCVD 178
+ +C SNPC ND C+D
Sbjct: 1 VNECVSNPCQNDATCLD 17
Score = 24.6 bits (54), Expect = 3.6
Identities = 10/25 (40%), Positives = 12/25 (48%), Gaps = 1/25 (4%)
Query: 15 QRNPCQNGGKCNEDETGNYDCTCDA 39
NPCQN C D+ G + C C
Sbjct: 5 VSNPCQNDATCL-DQIGEFQCICMP 28
Score = 23.5 bits (51), Expect = 8.9
Identities = 8/16 (50%), Positives = 11/16 (68%)
Query: 99 IRDCTSNPCLNDGVCV 114
+ +C SNPC ND C+
Sbjct: 1 VNECVSNPCQNDATCL 16
>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa)
[TaxId: 9823]}
Length = 37
Score = 48.9 bits (117), Expect = 6e-09
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 348 DFDECLSNPCFNGATCQNKINGYTCVCAPGYSGKEC 383
D D+C S+PC NG +C++++ Y C C P + G+ C
Sbjct: 1 DGDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNC 36
Score = 45.1 bits (107), Expect = 2e-07
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 387 INECESSPCLHGATCIDEVATFSCVCPKGLTGRLCE 422
++C SSPC +G +C D++ ++ C C GR CE
Sbjct: 2 GDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCE 37
Score = 29.3 bits (66), Expect = 0.062
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Query: 260 DPCKHG-SCVDKRAGYFCDCPPTYGGKNC 287
PC++G SC D+ Y C C P + G+NC
Sbjct: 8 SPCQNGGSCKDQLQSYICFCLPAFEGRNC 36
Score = 27.3 bits (61), Expect = 0.33
Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 5/36 (13%)
Query: 297 PDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICE 332
C NGG+CK + + C C + G+ CE
Sbjct: 7 SSPCQNGGSCK-----DQLQSYICFCLPAFEGRNCE 37
Score = 26.2 bits (58), Expect = 0.98
Identities = 9/28 (32%), Positives = 12/28 (42%)
Query: 134 IGDCSSNPCLNDGVCVDVYKGRYCELPE 161
C+S+PC N G C D + C
Sbjct: 2 GDQCASSPCQNGGSCKDQLQSYICFCLP 29
Score = 24.7 bits (54), Expect = 2.6
Identities = 11/25 (44%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
Query: 72 PCLNGATCRPQLTEQLYECVCPPGY 96
PC NG +C+ QL Y C C P +
Sbjct: 9 PCQNGGSCKDQLQS--YICFCLPAF 31
Score = 24.7 bits (54), Expect = 3.3
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 190 IRDCTSNPCLNDGVCVDEV 208
C S+PC N G C D++
Sbjct: 2 GDQCASSPCQNGGSCKDQL 20
Score = 24.7 bits (54), Expect = 3.5
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 162 IGDCSSNPCLNDGVCVD 178
C+S+PC N G C D
Sbjct: 2 GDQCASSPCQNGGSCKD 18
Score = 23.5 bits (51), Expect = 9.0
Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
Query: 15 QRNPCQNGGKCNEDETGNYDCTC 37
+PCQNGG C D+ +Y C C
Sbjct: 6 ASSPCQNGGSCK-DQLQSYICFC 27
>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein
1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 35
Score = 47.0 bits (112), Expect = 3e-08
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 350 DECLSNPCFNGATCQNKINGYTCVCAPGYSGKEC 383
DEC S+PC + C +KIN + C C G++G C
Sbjct: 1 DECASSPCLHNGRCLDKINEFQCECPTGFTGHLC 34
Score = 43.9 bits (104), Expect = 4e-07
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 388 NECESSPCLHGATCIDEVATFSCVCPKGLTGRLCE 422
+EC SSPCLH C+D++ F C CP G TG LC+
Sbjct: 1 DECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQ 35
Score = 29.3 bits (66), Expect = 0.066
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Query: 260 DPCKH-GSCVDKRAGYFCDCPPTYGGKNC 287
PC H G C+DK + C+CP + G C
Sbjct: 6 SPCLHNGRCLDKINEFQCECPTGFTGHLC 34
Score = 26.6 bits (59), Expect = 0.52
Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 5/36 (13%)
Query: 297 PDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICE 332
CL+ G C + + F C CP+G+ G +C+
Sbjct: 5 SSPCLHNGRCL-----DKINEFQCECPTGFTGHLCQ 35
Score = 25.8 bits (57), Expect = 1.0
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 136 DCSSNPCLNDGVCVDVYKGRYCELPE 161
+C+S+PCL++G C+D CE P
Sbjct: 2 ECASSPCLHNGRCLDKINEFQCECPT 27
Score = 25.0 bits (55), Expect = 2.5
Identities = 9/25 (36%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
Query: 72 PCLNGATCRPQLTEQLYECVCPPGY 96
PCL+ C ++ E ++C CP G+
Sbjct: 7 PCLHNGRCLDKINE--FQCECPTGF 29
Score = 24.2 bits (53), Expect = 3.9
Identities = 8/17 (47%), Positives = 15/17 (88%)
Query: 192 DCTSNPCLNDGVCVDEV 208
+C S+PCL++G C+D++
Sbjct: 2 ECASSPCLHNGRCLDKI 18
Score = 23.9 bits (52), Expect = 4.7
Identities = 8/15 (53%), Positives = 14/15 (93%)
Query: 164 DCSSNPCLNDGVCVD 178
+C+S+PCL++G C+D
Sbjct: 2 ECASSPCLHNGRCLD 16
Score = 23.5 bits (51), Expect = 8.4
Identities = 7/21 (33%), Positives = 12/21 (57%), Gaps = 1/21 (4%)
Query: 17 NPCQNGGKCNEDETGNYDCTC 37
+PC + G+C D+ + C C
Sbjct: 6 SPCLHNGRC-LDKINEFQCEC 25
>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein
1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 42
Score = 46.6 bits (111), Expect = 5e-08
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 346 DVDFDECLSNPCFNGATCQNKINGYTCVCAPGYSGKECSIN 386
DVD +NPC + C N + + C C GY+G C I+
Sbjct: 2 DVDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEID 42
Score = 42.4 bits (100), Expect = 2e-06
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 387 INECE--SSPCLHGATCIDEVATFSCVCPKGLTGRLCETN 424
++EC ++PC H CI+ + +F C C +G TG CE +
Sbjct: 3 VDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEID 42
Score = 29.3 bits (66), Expect = 0.062
Identities = 10/31 (32%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 260 DPCKH-GSCVDKRAGYFCDCPPTYGGKNCSV 289
+PC+H G C++ + C C Y G C +
Sbjct: 11 NPCEHAGKCINTLGSFECQCLQGYTGPRCEI 41
Score = 25.8 bits (57), Expect = 1.2
Identities = 10/26 (38%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Query: 12 CDAQRNPCQNGGKCNEDETGNYDCTC 37
C NPC++ GKC + G+++C C
Sbjct: 6 CSLGANPCEHAGKC-INTLGSFECQC 30
Score = 24.3 bits (53), Expect = 4.7
Identities = 9/25 (36%), Positives = 11/25 (44%), Gaps = 2/25 (8%)
Query: 72 PCLNGATCRPQLTEQLYECVCPPGY 96
PC + C T +EC C GY
Sbjct: 12 PCEHAGKCIN--TLGSFECQCLQGY 34
>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 39
Score = 44.4 bits (105), Expect = 3e-07
Identities = 14/38 (36%), Positives = 18/38 (47%)
Query: 350 DECLSNPCFNGATCQNKINGYTCVCAPGYSGKECSINI 387
C + C C IN YTC C PG+SG +C +
Sbjct: 2 AACTNTSCSGHGECVETINNYTCKCDPGFSGLKCEQIV 39
Score = 43.6 bits (103), Expect = 5e-07
Identities = 9/38 (23%), Positives = 18/38 (47%)
Query: 388 NECESSPCLHGATCIDEVATFSCVCPKGLTGRLCETNI 425
C ++ C C++ + ++C C G +G CE +
Sbjct: 2 AACTNTSCSGHGECVETINNYTCKCDPGFSGLKCEQIV 39
Score = 28.2 bits (63), Expect = 0.16
Identities = 10/29 (34%), Positives = 12/29 (41%), Gaps = 1/29 (3%)
Query: 260 DPCKH-GSCVDKRAGYFCDCPPTYGGKNC 287
C G CV+ Y C C P + G C
Sbjct: 7 TSCSGHGECVETINNYTCKCDPGFSGLKC 35
Score = 25.9 bits (57), Expect = 1.1
Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 5/37 (13%)
Query: 297 PDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICEK 333
+C G C ET + + C C G+ G CE+
Sbjct: 6 NTSCSGHGECV-----ETINNYTCKCDPGFSGLKCEQ 37
Score = 25.1 bits (55), Expect = 1.9
Identities = 6/25 (24%), Positives = 10/25 (40%)
Query: 136 DCSSNPCLNDGVCVDVYKGRYCELP 160
C++ C G CV+ C+
Sbjct: 3 ACTNTSCSGHGECVETINNYTCKCD 27
Score = 24.0 bits (52), Expect = 5.7
Identities = 7/25 (28%), Positives = 9/25 (36%), Gaps = 2/25 (8%)
Query: 72 PCLNGATCRPQLTEQLYECVCPPGY 96
C C + Y C C PG+
Sbjct: 8 SCSGHGECVETINN--YTCKCDPGF 30
Score = 23.6 bits (51), Expect = 6.7
Identities = 6/17 (35%), Positives = 9/17 (52%)
Query: 192 DCTSNPCLNDGVCVDEV 208
CT+ C G CV+ +
Sbjct: 3 ACTNTSCSGHGECVETI 19
Score = 23.6 bits (51), Expect = 8.7
Identities = 5/15 (33%), Positives = 8/15 (53%)
Query: 164 DCSSNPCLNDGVCVD 178
C++ C G CV+
Sbjct: 3 ACTNTSCSGHGECVE 17
Score = 23.2 bits (50), Expect = 9.6
Identities = 7/23 (30%), Positives = 9/23 (39%), Gaps = 1/23 (4%)
Query: 15 QRNPCQNGGKCNEDETGNYDCTC 37
C G+C + NY C C
Sbjct: 5 TNTSCSGHGECV-ETINNYTCKC 26
Score = 23.2 bits (50), Expect = 10.0
Identities = 12/44 (27%), Positives = 17/44 (38%), Gaps = 9/44 (20%)
Query: 221 DCTSNPCLNDCVNPCQNGGKCNEDETGNYDCTCDALHTGDPCKH 264
CT+ C G+C + NY C CD +G C+
Sbjct: 3 ACTNT--------SCSGHGECV-ETINNYTCKCDPGFSGLKCEQ 37
>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 63
Score = 44.6 bits (105), Expect = 5e-07
Identities = 14/54 (25%), Positives = 21/54 (38%), Gaps = 5/54 (9%)
Query: 347 VDFDECLSNPCFNGATC-----QNKINGYTCVCAPGYSGKECSININECESSPC 395
V E C NG C + + Y C C PG++G C+ N+ +
Sbjct: 4 VKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVPMKVQNQE 57
Score = 43.8 bits (103), Expect = 7e-07
Identities = 12/49 (24%), Positives = 20/49 (40%), Gaps = 5/49 (10%)
Query: 385 ININECESSPCLHGATC-----IDEVATFSCVCPKGLTGRLCETNIDDC 428
+ E E + C++G C + + + C C G TG C N+
Sbjct: 4 VKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVPMK 52
Score = 31.1 bits (70), Expect = 0.025
Identities = 11/33 (33%), Positives = 14/33 (42%)
Query: 300 CLNGGTCKPYLVDETQHRFNCTCPSGYHGKICE 332
C+NGG C R+ C C G+ G C
Sbjct: 14 CVNGGECFMVKDLSNPSRYLCKCQPGFTGARCT 46
Score = 29.2 bits (65), Expect = 0.12
Identities = 9/46 (19%), Positives = 15/46 (32%)
Query: 250 DCTCDALHTGDPCKHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCV 295
+ G C + + Y C C P + G C+ + V
Sbjct: 8 EKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVPMKV 53
>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 40
Score = 42.9 bits (101), Expect = 1e-06
Identities = 13/34 (38%), Positives = 14/34 (41%)
Query: 350 DECLSNPCFNGATCQNKINGYTCVCAPGYSGKEC 383
C C C I YTC C PG+ G EC
Sbjct: 2 ASCQDMSCSKQGECLETIGNYTCSCYPGFYGPEC 35
Score = 41.3 bits (97), Expect = 3e-06
Identities = 10/39 (25%), Positives = 16/39 (41%)
Query: 388 NECESSPCLHGATCIDEVATFSCVCPKGLTGRLCETNID 426
C+ C C++ + ++C C G G CE D
Sbjct: 2 ASCQDMSCSKQGECLETIGNYTCSCYPGFYGPECEYVRD 40
Score = 28.2 bits (63), Expect = 0.19
Identities = 9/29 (31%), Positives = 12/29 (41%), Gaps = 1/29 (3%)
Query: 260 DPCKH-GSCVDKRAGYFCDCPPTYGGKNC 287
C G C++ Y C C P + G C
Sbjct: 7 MSCSKQGECLETIGNYTCSCYPGFYGPEC 35
Score = 26.7 bits (59), Expect = 0.66
Identities = 10/32 (31%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 233 NPCQNGGKCNEDETGNYDCTCDALHTGDPCKH 264
C G+C + GNY C+C G C++
Sbjct: 7 MSCSKQGECL-ETIGNYTCSCYPGFYGPECEY 37
Score = 25.9 bits (57), Expect = 1.0
Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 5/36 (13%)
Query: 297 PDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICE 332
+C G C ET + C+C G++G CE
Sbjct: 6 DMSCSKQGECL-----ETIGNYTCSCYPGFYGPECE 36
Score = 25.1 bits (55), Expect = 2.0
Identities = 5/24 (20%), Positives = 7/24 (29%)
Query: 137 CSSNPCLNDGVCVDVYKGRYCELP 160
C C G C++ C
Sbjct: 4 CQDMSCSKQGECLETIGNYTCSCY 27
Score = 23.6 bits (51), Expect = 6.9
Identities = 7/25 (28%), Positives = 9/25 (36%), Gaps = 2/25 (8%)
Query: 72 PCLNGATCRPQLTEQLYECVCPPGY 96
C C + Y C C PG+
Sbjct: 8 SCSKQGECLETIGN--YTCSCYPGF 30
Score = 23.6 bits (51), Expect = 7.1
Identities = 4/16 (25%), Positives = 7/16 (43%)
Query: 193 CTSNPCLNDGVCVDEV 208
C C G C++ +
Sbjct: 4 CQDMSCSKQGECLETI 19
Score = 23.6 bits (51), Expect = 8.7
Identities = 4/14 (28%), Positives = 6/14 (42%)
Query: 165 CSSNPCLNDGVCVD 178
C C G C++
Sbjct: 4 CQDMSCSKQGECLE 17
>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin
IIa) {Human (Homo sapiens) [TaxId: 9606]}
Length = 48
Score = 40.2 bits (94), Expect = 1e-05
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 387 INECESSPCLHGATCIDEVATFSCVCPKGLTGRLCETNID 426
+ C S C HG TCID + +FSC C G GR C+ +
Sbjct: 8 EHPCASLCCGHG-TCIDGIGSFSCDCRSGWEGRFCQREVS 46
Score = 39.4 bits (92), Expect = 2e-05
Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 350 DECLSNPCFNGATCQNKINGYTCVCAPGYSGKECSININ 388
C S C +G TC + I ++C C G+ G+ C ++
Sbjct: 9 HPCASLCCGHG-TCIDGIGSFSCDCRSGWEGRFCQREVS 46
Score = 33.2 bits (76), Expect = 0.003
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 260 DPCKHGSCVDKRAGYFCDCPPTYGGKNCSVELT 292
C HG+C+D + CDC + G+ C E++
Sbjct: 14 LCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVS 46
>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type),
t-PA {Human (Homo sapiens) [TaxId: 9606]}
Length = 41
Score = 39.5 bits (92), Expect = 2e-05
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 352 CLSNPCFNGATCQNKI--NGYTCVCAPGYSGKECSININE 389
C CFNG TCQ + + + C C G++GK C I+
Sbjct: 1 CSEPRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEIDTRA 40
Score = 36.0 bits (83), Expect = 3e-04
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Query: 390 CESSPCLHGATCIDEV--ATFSCVCPKGLTGRLCETNID 426
C C +G TC + + F C CP+G G+ CE +
Sbjct: 1 CSEPRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEIDTR 39
Score = 27.5 bits (61), Expect = 0.33
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 72 PCLNGATCRPQLTEQLYECVCPPGY 96
C NG TC+ L + C CP G+
Sbjct: 5 RCFNGGTCQQALYFSDFVCQCPEGF 29
Score = 24.8 bits (54), Expect = 2.9
Identities = 9/31 (29%), Positives = 12/31 (38%), Gaps = 1/31 (3%)
Query: 233 NPCQNGGKCNEDETGN-YDCTCDALHTGDPC 262
C NGG C + + + C C G C
Sbjct: 4 PRCFNGGTCQQALYFSDFVCQCPEGFAGKSC 34
Score = 24.8 bits (54), Expect = 2.9
Identities = 6/21 (28%), Positives = 9/21 (42%)
Query: 193 CTSNPCLNDGVCVDEVYKGRY 213
C+ C N G C +Y +
Sbjct: 1 CSEPRCFNGGTCQQALYFSDF 21
Score = 24.1 bits (52), Expect = 5.9
Identities = 6/21 (28%), Positives = 6/21 (28%)
Query: 137 CSSNPCLNDGVCVDVYKGRYC 157
CS C N G C
Sbjct: 1 CSEPRCFNGGTCQQALYFSDF 21
>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like
module {Mouse (Mus musculus) [TaxId: 10090]}
Length = 41
Score = 36.7 bits (85), Expect = 2e-04
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 350 DECLSNPCFNGATCQN-KINGYTCVC-APGYSGKECSI 385
+ C SNPC N C + + Y C C G+ G+ C+
Sbjct: 2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTT 39
Score = 34.0 bits (78), Expect = 0.001
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 388 NECESSPCLHGATCID-EVATFSCVCPK-GLTGRLCET 423
N C S+PC + C+ + C C + G G C T
Sbjct: 2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTT 39
Score = 27.8 bits (62), Expect = 0.23
Identities = 13/32 (40%), Positives = 16/32 (50%), Gaps = 3/32 (9%)
Query: 224 SNPCLNDCVNPCQNGGKCNEDETGNYDCTCDA 255
+NPC + NPCQN G+C Y C C
Sbjct: 1 ANPCCS---NPCQNRGECMSTGFDQYKCDCTR 29
Score = 27.1 bits (60), Expect = 0.46
Identities = 10/23 (43%), Positives = 11/23 (47%)
Query: 17 NPCQNGGKCNEDETGNYDCTCDA 39
NPCQN G+C Y C C
Sbjct: 7 NPCQNRGECMSTGFDQYKCDCTR 29
Score = 25.5 bits (56), Expect = 1.5
Identities = 9/38 (23%), Positives = 17/38 (44%), Gaps = 5/38 (13%)
Query: 297 PDTCLNGGTCKPYLVDETQHRFNCTCP-SGYHGKICEK 333
+ C N G C + ++ C C +G++G+ C
Sbjct: 6 SNPCQNRGEC----MSTGFDQYKCDCTRTGFYGENCTT 39
Score = 25.5 bits (56), Expect = 1.8
Identities = 12/39 (30%), Positives = 14/39 (35%), Gaps = 13/39 (33%)
Query: 136 DCSSNPCLNDGVCVDV-------------YKGRYCELPE 161
C SNPC N G C+ + G C PE
Sbjct: 3 PCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTTPE 41
Score = 25.1 bits (55), Expect = 2.0
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 164 DCSSNPCLNDGVCVDVYKGRY 184
C SNPC N G C+ +Y
Sbjct: 3 PCCSNPCQNRGECMSTGFDQY 23
>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like
module {Sheep (Ovis aries) [TaxId: 9940]}
Length = 42
Score = 35.6 bits (82), Expect = 4e-04
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 350 DECLSNPCFNGATCQNK-INGYTCVCAP-GYSGKECSI 385
+ C PC + C ++ Y C C GYSG C+I
Sbjct: 3 NPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTI 40
Score = 34.4 bits (79), Expect = 0.001
Identities = 11/39 (28%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Query: 387 INECESSPCLHGATCIDE-VATFSCVCPK-GLTGRLCET 423
+N C PC H C+ + + C C + G +G C
Sbjct: 2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTI 40
Score = 26.3 bits (58), Expect = 0.98
Identities = 11/41 (26%), Positives = 15/41 (36%), Gaps = 13/41 (31%)
Query: 134 IGDCSSNPCLNDGVCVDV-------------YKGRYCELPE 161
+ C PC + G+CV Y G C +PE
Sbjct: 2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTIPE 42
Score = 25.6 bits (56), Expect = 1.5
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 162 IGDCSSNPCLNDGVCVDVYKGRY 184
+ C PC + G+CV RY
Sbjct: 2 VNPCCYYPCQHQGICVRFGLDRY 24
Score = 25.6 bits (56), Expect = 1.7
Identities = 10/27 (37%), Positives = 12/27 (44%), Gaps = 1/27 (3%)
Query: 228 LNDCV-NPCQNGGKCNEDETGNYDCTC 253
+N C PCQ+ G C Y C C
Sbjct: 2 VNPCCYYPCQHQGICVRFGLDRYQCDC 28
Score = 25.6 bits (56), Expect = 1.8
Identities = 8/23 (34%), Positives = 9/23 (39%)
Query: 15 QRNPCQNGGKCNEDETGNYDCTC 37
PCQ+ G C Y C C
Sbjct: 6 CYYPCQHQGICVRFGLDRYQCDC 28
Score = 25.6 bits (56), Expect = 1.9
Identities = 11/38 (28%), Positives = 14/38 (36%), Gaps = 5/38 (13%)
Query: 297 PDTCLNGGTCKPYLVDETQHRFNCTCP-SGYHGKICEK 333
C + G C V R+ C C +GY G C
Sbjct: 7 YYPCQHQGIC----VRFGLDRYQCDCTRTGYSGPNCTI 40
Score = 25.2 bits (55), Expect = 2.0
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 6/41 (14%)
Query: 99 IRDCTSNPCLNDGVCVWMF------DVTIQVYKGRYCELPE 133
+ C PC + G+CV D T Y G C +PE
Sbjct: 2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTIPE 42
>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 53
Score = 35.2 bits (81), Expect = 7e-04
Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Query: 350 DECLSNPCFNGATCQN--KINGYTCVCAPGYSGKEC 383
C NG C + ++ YTC C GYSG C
Sbjct: 7 PSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRC 42
Score = 34.5 bits (79), Expect = 0.001
Identities = 11/38 (28%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 388 NECESSPCLHGATC--IDEVATFSCVCPKGLTGRLCET 423
CL+G C I+ + +++C C G +G C+T
Sbjct: 7 PSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQT 44
Score = 29.9 bits (67), Expect = 0.064
Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 3/36 (8%)
Query: 297 PDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICE 332
CLNGG C E+ + C C GY G C+
Sbjct: 11 DGYCLNGGVCMH---IESLDSYTCNCVIGYSGDRCQ 43
Score = 28.7 bits (64), Expect = 0.14
Identities = 10/25 (40%), Positives = 11/25 (44%)
Query: 72 PCLNGATCRPQLTEQLYECVCPPGY 96
CLNG C + Y C C GY
Sbjct: 13 YCLNGGVCMHIESLDSYTCNCVIGY 37
Score = 24.5 bits (53), Expect = 5.3
Identities = 8/31 (25%), Positives = 12/31 (38%), Gaps = 3/31 (9%)
Query: 260 DPCKHG---SCVDKRAGYFCDCPPTYGGKNC 287
C +G ++ Y C+C Y G C
Sbjct: 12 GYCLNGGVCMHIESLDSYTCNCVIGYSGDRC 42
>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 43
Score = 34.7 bits (80), Expect = 0.001
Identities = 12/34 (35%), Positives = 12/34 (35%)
Query: 347 VDFDECLSNPCFNGATCQNKINGYTCVCAPGYSG 380
VD DEC C N Y C C GY
Sbjct: 3 VDMDECKEPDVCKHGQCINTDGSYRCECPFGYIL 36
Score = 29.3 bits (66), Expect = 0.073
Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Query: 385 ININECESSPCLHGATCIDEVATFSCVCPKG--LTGRLCE 422
++++EC+ CI+ ++ C CP G L G C
Sbjct: 3 VDMDECKEPDVCKHGQCINTDGSYRCECPFGYILAGNECV 42
>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo
sapiens) [TaxId: 9606]}
Length = 48
Score = 34.9 bits (80), Expect = 0.001
Identities = 10/40 (25%), Positives = 15/40 (37%), Gaps = 2/40 (5%)
Query: 346 DVDFDECLSNPCFNGATCQN--KINGYTCVCAPGYSGKEC 383
D + C + C ++ Y C C GY G+ C
Sbjct: 1 DSECPLSHDGYCLHDGVCMYIEALDKYACNCVVGYIGERC 40
Score = 34.5 bits (79), Expect = 0.001
Identities = 10/39 (25%), Positives = 15/39 (38%), Gaps = 2/39 (5%)
Query: 387 INECESSPCLHGATC--IDEVATFSCVCPKGLTGRLCET 423
CLH C I+ + ++C C G G C+
Sbjct: 4 CPLSHDGYCLHDGVCMYIEALDKYACNCVVGYIGERCQY 42
Score = 27.5 bits (61), Expect = 0.32
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 3/33 (9%)
Query: 300 CLNGGTCKPYLVDETQHRFNCTCPSGYHGKICE 332
CL+ G C E ++ C C GY G+ C+
Sbjct: 12 CLHDGVCMY---IEALDKYACNCVVGYIGERCQ 41
Score = 27.1 bits (60), Expect = 0.48
Identities = 8/25 (32%), Positives = 9/25 (36%)
Query: 72 PCLNGATCRPQLTEQLYECVCPPGY 96
CL+ C Y C C GY
Sbjct: 11 YCLHDGVCMYIEALDKYACNCVVGY 35
Score = 23.7 bits (51), Expect = 9.1
Identities = 11/63 (17%), Positives = 16/63 (25%), Gaps = 24/63 (38%)
Query: 225 NPCLNDCVNPCQNGGKCNEDETGNYDCTCDALHTGDPCKHGSCVDKRAGYFCDCPPTYGG 284
+ C C + G C E + Y C+C Y G
Sbjct: 2 SECPLSHDGYCLHDGVCMYIEALD------------------------KYACNCVVGYIG 37
Query: 285 KNC 287
+ C
Sbjct: 38 ERC 40
>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 50
Score = 31.0 bits (70), Expect = 0.026
Identities = 8/40 (20%), Positives = 12/40 (30%)
Query: 225 NPCLNDCVNPCQNGGKCNEDETGNYDCTCDALHTGDPCKH 264
+ C + C G C CD + G C+
Sbjct: 6 SRCPKQYKHYCIKGRCRFVVAEQTPSCVCDEGYIGARCER 45
Score = 30.6 bits (69), Expect = 0.035
Identities = 11/36 (30%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 388 NECESSPCLHGATC-IDEVATFSCVCPKGLTGRLCE 422
+ C+ G + T SCVC +G G CE
Sbjct: 9 PKQYKHYCIKGRCRFVVAEQTPSCVCDEGYIGARCE 44
Score = 29.8 bits (67), Expect = 0.056
Identities = 9/35 (25%), Positives = 12/35 (34%), Gaps = 1/35 (2%)
Query: 350 DECLSNPCFNGATC-QNKINGYTCVCAPGYSGKEC 383
+ + C G +CVC GY G C
Sbjct: 9 PKQYKHYCIKGRCRFVVAEQTPSCVCDEGYIGARC 43
Score = 28.6 bits (64), Expect = 0.15
Identities = 17/63 (26%), Positives = 22/63 (34%), Gaps = 18/63 (28%)
Query: 271 RAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKI 330
R G+F CP Y C+ G ++V E C C GY G
Sbjct: 1 RKGHFSRCPKQYK--------------HYCIKGRCR--FVVAEQTPS--CVCDEGYIGAR 42
Query: 331 CEK 333
CE+
Sbjct: 43 CER 45
>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo
sapiens) [TaxId: 9606]}
Length = 49
Score = 29.4 bits (66), Expect = 0.071
Identities = 10/36 (27%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Query: 388 NECESSPCLHGATC-IDEVATFSCVCPKGLTGRLCE 422
+ + C HG + + +CVC G G CE
Sbjct: 8 PDSHTQFCFHGTCRFLVQEDKPACVCHSGYVGARCE 43
Score = 29.4 bits (66), Expect = 0.092
Identities = 9/40 (22%), Positives = 15/40 (37%)
Query: 225 NPCLNDCVNPCQNGGKCNEDETGNYDCTCDALHTGDPCKH 264
N C + C +G + C C + + G C+H
Sbjct: 5 NDCPDSHTQFCFHGTCRFLVQEDKPACVCHSGYVGARCEH 44
Score = 27.9 bits (62), Expect = 0.28
Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Query: 350 DECLSNPCFNGATCQ-NKINGYTCVCAPGYSGKEC 383
+ + CF+G + + CVC GY G C
Sbjct: 8 PDSHTQFCFHGTCRFLVQEDKPACVCHSGYVGARC 42
Score = 27.9 bits (62), Expect = 0.33
Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 4/33 (12%)
Query: 300 CLNGGTCKPYLVDETQHRFNCTCPSGYHGKICE 332
C +G +LV E + C C SGY G CE
Sbjct: 15 CFHGTCR--FLVQEDKPA--CVCHSGYVGARCE 43
>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 44
Score = 29.4 bits (66), Expect = 0.072
Identities = 11/34 (32%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 348 DFDECLSNP-CFNGATCQNKINGYTCVCAPGYSG 380
D DEC +P C N + C C GY
Sbjct: 2 DIDECRISPDLCGRGQCVNTPGDFECKCDEGYES 35
Score = 24.8 bits (54), Expect = 3.1
Identities = 11/33 (33%), Positives = 13/33 (39%), Gaps = 5/33 (15%)
Query: 260 DPCKHGSCVDKRAGYFCDCPPTY-----GGKNC 287
D C G CV+ + C C Y KNC
Sbjct: 11 DLCGRGQCVNTPGDFECKCDEGYESGFMMMKNC 43
Score = 24.4 bits (53), Expect = 4.9
Identities = 10/33 (30%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Query: 387 INECESSP-CLHGATCIDEVATFSCVCPKGLTG 418
I+EC SP C++ F C C +G
Sbjct: 3 IDECRISPDLCGRGQCVNTPGDFECKCDEGYES 35
>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens)
[TaxId: 9606]}
Length = 46
Score = 29.0 bits (65), Expect = 0.10
Identities = 8/35 (22%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Query: 350 DECLSNPCFNGATC-QNKINGYTCVCAPGYSGKEC 383
++ C +G ++ C C GY+G C
Sbjct: 7 SSDMNGYCLHGQCIYLVDMSQNYCRCEVGYTGVRC 41
Score = 27.8 bits (62), Expect = 0.26
Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Query: 388 NECESSPCLHGATC-IDEVATFSCVCPKGLTGRLCE 422
+ + CLHG + +++ C C G TG CE
Sbjct: 7 SSDMNGYCLHGQCIYLVDMSQNYCRCEVGYTGVRCE 42
Score = 26.3 bits (58), Expect = 0.87
Identities = 10/40 (25%), Positives = 16/40 (40%)
Query: 225 NPCLNDCVNPCQNGGKCNEDETGNYDCTCDALHTGDPCKH 264
C +D C +G + C C+ +TG C+H
Sbjct: 4 TKCSSDMNGYCLHGQCIYLVDMSQNYCRCEVGYTGVRCEH 43
Score = 25.1 bits (55), Expect = 2.4
Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 4/33 (12%)
Query: 300 CLNGGTCKPYLVDETQHRFNCTCPSGYHGKICE 332
CL+G YLVD +Q+ C C GY G CE
Sbjct: 14 CLHGQCI--YLVDMSQNY--CRCEVGYTGVRCE 42
Score = 23.6 bits (51), Expect = 8.2
Identities = 9/30 (30%), Positives = 12/30 (40%), Gaps = 2/30 (6%)
Query: 260 DPCKHGSC--VDKRAGYFCDCPPTYGGKNC 287
C HG C + + +C C Y G C
Sbjct: 12 GYCLHGQCIYLVDMSQNYCRCEVGYTGVRC 41
>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 43
Score = 28.3 bits (63), Expect = 0.16
Identities = 10/35 (28%), Positives = 12/35 (34%)
Query: 348 DFDECLSNPCFNGATCQNKINGYTCVCAPGYSGKE 382
D +ECL C N Y C C P +
Sbjct: 2 DVNECLDPTTCISGNCVNTPGSYICDCPPDFELNP 36
Score = 24.1 bits (52), Expect = 5.2
Identities = 7/32 (21%), Positives = 12/32 (37%)
Query: 387 INECESSPCLHGATCIDEVATFSCVCPKGLTG 418
+NEC C++ ++ C CP
Sbjct: 3 VNECLDPTTCISGNCVNTPGSYICDCPPDFEL 34
>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 42
Score = 27.1 bits (60), Expect = 0.41
Identities = 13/32 (40%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 348 DFDECLSNP-CFNGATCQNKINGYTCVCAPGY 378
D DEC +P G C N Y C C PG+
Sbjct: 1 DIDECQRDPLLCRGGVCHNTEGSYRCECPPGH 32
>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 43
Score = 27.1 bits (60), Expect = 0.44
Identities = 12/32 (37%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Query: 348 DFDECLSNPCF-NGATCQNKINGYTCVCAPGY 378
D DEC P G C N + C C GY
Sbjct: 2 DIDECQELPGLCQGGKCINTFGSFQCRCPTGY 33
>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL)
receptor, different EGF domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 40
Score = 27.0 bits (60), Expect = 0.46
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 350 DECLSNPCFNGATCQNKINGYTCVCAPGY 378
+ECL N C + GY C+C G+
Sbjct: 3 NECLDNNGGCSHVCNDLKIGYECLCPDGF 31
>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 40
Score = 27.1 bits (60), Expect = 0.48
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 354 SNPCFNGATCQNKINGYTCVCAPGYSG 380
+ C A C++ G+ C C Y+G
Sbjct: 6 RHQCSVHAECRDYATGFCCRCVANYTG 32
>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 40
Score = 26.3 bits (58), Expect = 0.74
Identities = 11/33 (33%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Query: 348 DFDECLSNPCFNGATCQNKINGYTCVCAPGYSG 380
D DEC N F C N + C+C P +
Sbjct: 1 DIDEC-ENGGFCSGVCHNLPGTFECICGPDSAL 32
>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens)
[TaxId: 9606]}
Length = 53
Score = 26.5 bits (58), Expect = 1.0
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 8/40 (20%)
Query: 347 VDFDECLSN--------PCFNGATCQNKINGYTCVCAPGY 378
VD DEC S C N + GY C C PGY
Sbjct: 2 VDLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCSCRPGY 41
>d1w07a3 e.6.1.2 (A:2-272) Acyl-coenzyme A oxidase 1, domains 1 and
2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 271
Score = 27.0 bits (59), Expect = 4.3
Identities = 17/112 (15%), Positives = 27/112 (24%), Gaps = 1/112 (0%)
Query: 241 CNEDETGNYDCTCDALHTGDPCKHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTC 300
E G+ + T DP + P G S T
Sbjct: 136 QTELGHGSNVQGLETTATLDPKTDEFVIHTPTQTASKWWPG-GLGKVSTHAVVYARLITN 194
Query: 301 LNGGTCKPYLVDETQHRFNCTCPSGYHGKICEKCFCRPGFAGDHCDVDFDEC 352
++V + P+ G I K + D+ + FD
Sbjct: 195 GKDYGIHGFIVQLRSLEDHSPLPNITVGDIGTKMGNGAYNSMDNGFLMFDHV 246
>d1nl1a2 g.32.1.1 (A:1-65) Prothrombin {Cow (Bos taurus) [TaxId:
9913]}
Length = 65
Score = 24.4 bits (53), Expect = 6.5
Identities = 3/16 (18%), Positives = 7/16 (43%)
Query: 135 GDCSSNPCLNDGVCVD 150
+ + NP C++
Sbjct: 48 CESARNPREKLNECLE 63
Score = 24.4 bits (53), Expect = 6.5
Identities = 3/16 (18%), Positives = 7/16 (43%)
Query: 163 GDCSSNPCLNDGVCVD 178
+ + NP C++
Sbjct: 48 CESARNPREKLNECLE 63
Score = 24.4 bits (53), Expect = 7.8
Identities = 5/16 (31%), Positives = 10/16 (62%)
Query: 10 SPCDAQRNPCQNGGKC 25
+ C++ RNP + +C
Sbjct: 46 TACESARNPREKLNEC 61
>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor,
different EGF domains {Human (Homo sapiens) [TaxId:
9606]}
Length = 41
Score = 23.5 bits (51), Expect = 7.5
Identities = 11/29 (37%), Positives = 13/29 (44%), Gaps = 1/29 (3%)
Query: 350 DECLSNPCFNGATCQNKINGYTCVCAPGY 378
DEC +P C N GY C C G+
Sbjct: 2 DEC-QDPDTCSQLCVNLEGGYKCQCEEGF 29
>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated
serine protease 2, MASP2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 45
Score = 23.7 bits (51), Expect = 7.6
Identities = 11/32 (34%), Positives = 13/32 (40%), Gaps = 3/32 (9%)
Query: 350 DECLSNPCFNGA---TCQNKINGYTCVCAPGY 378
DEC P C N + G+ C C GY
Sbjct: 2 DECQVAPGEAPTCDHHCHNHLGGFYCSCRAGY 33
>d1kloa1 g.3.11.2 (A:11-65) Laminin gamma1 chain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 55
Score = 24.1 bits (52), Expect = 8.3
Identities = 9/44 (20%), Positives = 15/44 (34%)
Query: 321 TCPSGYHGKICEKCFCRPGFAGDHCDVDFDECLSNPCFNGATCQ 364
+C K C G AG C++ D +P + +
Sbjct: 8 SCAIVPKTKEVVCTHCPTGTAGKRCELCDDGYFGDPLGSNGPVR 51
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.322 0.141 0.505
Gapped
Lambda K H
0.267 0.0432 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,862,225
Number of extensions: 107417
Number of successful extensions: 995
Number of sequences better than 10.0: 1
Number of HSP's gapped: 770
Number of HSP's successfully gapped: 427
Length of query: 429
Length of database: 2,407,596
Length adjustment: 88
Effective length of query: 341
Effective length of database: 1,199,356
Effective search space: 408980396
Effective search space used: 408980396
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.3 bits)