BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11060
(155 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P10040|CRB_DROME Protein crumbs OS=Drosophila melanogaster GN=crb PE=1 SV=3
Length = 2146
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 67/101 (66%), Gaps = 1/101 (0%)
Query: 52 YSPCKHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRF 111
Y+PC+ G+C D+ Y CDC YGGKNCSV L GC + CLNGG C PYL++E H +
Sbjct: 947 YNPCQRGTCYDQIDDYDCDCDANYGGKNCSVLLKGC-DQNPCLNGGACLPYLINEVTHLY 1005
Query: 112 NCTCPSGYHGKICEKITTMSFSGGSHIMLNTTREEGYDISF 152
NCTC +G+ G CEK TT+S S I + T REEGYDI+
Sbjct: 1006 NCTCENGFQGDKCEKTTTLSMVATSLISVTTEREEGYDINL 1046
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA PC +G +C D A Y CDCP Y G C V + C NG TC+ T
Sbjct: 1836 CADQPCHNGGNCTDLIASYVCDCPEDYMGPQCDVLKQMTCENEPCRNGSTCQNGFNASTG 1895
Query: 109 HRFNCTCPSGYHGKICE 125
+ F CTC G+ G +C+
Sbjct: 1896 NNFTCTCVPGFEGPLCD 1912
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 8/78 (10%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C +PC +GS C+D+ + C+C P G+ C +++ CVG D CLNGG C L
Sbjct: 727 CGSNPCSNGSTCIDRINNFTCNCIPGMTGRICDIDIDDCVG-DPCLNGGQCIDQL----- 780
Query: 109 HRFNCTCP-SGYHGKICE 125
F C C +GY G+ CE
Sbjct: 781 GGFRCDCSGTGYEGENCE 798
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 8/82 (9%)
Query: 50 CAYSPCKH-GSCVDKRAGYFCDCPPT-YGGKNCSVELTGCVGPDTCLNGGTCKPYLVDET 107
CA PC++ GSC+D+ G+ CDC T Y G C + C + CLNGG C +T
Sbjct: 390 CASQPCQNNGSCIDRINGFSCDCSGTGYTGAFCQTNVDEC-DKNPCLNGGRCF-----DT 443
Query: 108 QHRFNCTCPSGYHGKICEKITT 129
+ C C G+ G+IC++ T
Sbjct: 444 YGWYTCQCLDGWGGEICDRPMT 465
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPT-YGGKNCSVELTGCVGPDTCLNGGTCKPYLVDET 107
C PC +G C+D+ G+ CDC T Y G+NC + + C+ + C NG C +D
Sbjct: 765 CVGDPCLNGGQCIDQLGGFRCDCSGTGYEGENCELNIDECLS-NPCTNGAKC----LDRV 819
Query: 108 QHRFNCTCPSGYHGKICEK 126
+ F C C +GY GK CE+
Sbjct: 820 KDYF-CDCHNGYKGKNCEQ 837
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 49 PCAYSPCKHG-SCVDK-RAGYFCDCPPTYGGKNCSVELTGCVGP----DTCLNGGTCKPY 102
PCA +PC++G SC++ R Y C C P + G++C E+ + P + CLN G C
Sbjct: 307 PCAKNPCENGGSCLENSRGDYQCFCDPNHSGQHCETEVN--IHPLCQTNPCLNNGAC--- 361
Query: 103 LVDETQHRFNCTCPSGYHGKICEKIT 128
+V C CP GY G CE T
Sbjct: 362 VVIGGSGALTCECPKGYAGARCEVDT 387
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 8/98 (8%)
Query: 31 IMLKSDYRL-IIRPLYSLCPCAYSPCKH-GSCVDKRAGYFCDCPPTYGGKNCSVELTGCV 88
+ K+ +RL RP C S CK+ G C Y C C P + G +C ++ C+
Sbjct: 1740 VQQKAQFRLNATRPEEGCILCFQSDCKNDGFCQSPSDEYACTCQPGFEGDDCGTDIDECL 1799
Query: 89 GPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICEK 126
+ CLN GTC + F C C G+ G+ CE+
Sbjct: 1800 NTE-CLNNGTCINQVA-----AFFCQCQPGFEGQHCEQ 1831
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 56 KHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTC 115
+G+C+++ A +FC C P + G++C + C C NGG C + + C C
Sbjct: 1805 NNGTCINQVAAFFCQCQPGFEGQHCEQNIDECAD-QPCHNGGNCTDLIA-----SYVCDC 1858
Query: 116 PSGYHGKICEKITTMS 131
P Y G C+ + M+
Sbjct: 1859 PEDYMGPQCDVLKQMT 1874
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C PC +G+ C +K Y C C P Y G+NC V++ C G + C NG TC +
Sbjct: 689 CLSFPCLNGATCHNKINAYECVCQPGYEGENCEVDIDEC-GSNPCSNGSTCIDRI----- 742
Query: 109 HRFNCTCPSGYHGKICE 125
+ F C C G G+IC+
Sbjct: 743 NNFTCNCIPGMTGRICD 759
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 50/122 (40%), Gaps = 16/122 (13%)
Query: 14 LLHGKQFSIGTNSVLNVIMLK---------SDYRLIIRPLYSLCPCAYSPCK-HGSCVDK 63
LL G NS + ++ SD+ L R + C PC HG+C
Sbjct: 226 LLDGPGLQFVNNSTVQNVVFGHCPLTPGPCSDHDLFTRLPDNFC--LNDPCMGHGTCSSS 283
Query: 64 RAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKI 123
GY C C Y GKNC + + C NGG+C ++ ++ + C C + G+
Sbjct: 284 PEGYECRCTARYSGKNCQKDNGSPCAKNPCENGGSC----LENSRGDYQCFCDPNHSGQH 339
Query: 124 CE 125
CE
Sbjct: 340 CE 341
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C +PC +G C D Y C C +GG+ C +T CLNGGTC +
Sbjct: 429 CDKNPCLNGGRCFDTYGWYTCQCLDGWGGEICDRPMT--CQTQQCLNGGTCLDKPIG--- 483
Query: 109 HRFNCTCPSGYHGKICE 125
F C CP Y G++C+
Sbjct: 484 --FQCLCPPEYTGELCQ 498
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Query: 55 CKHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCT 114
C +G C +++ Y C C P + G +C ++ C+ CLNG TC + + + C
Sbjct: 657 CGNGICKNEKGSYKCYCTPGFTGVHCDSDVDECLS-FPCLNGATCHNKI-----NAYECV 710
Query: 115 CPSGYHGKICE 125
C GY G+ CE
Sbjct: 711 CQPGYEGENCE 721
Score = 37.4 bits (85), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGC 87
C +PC +G+ C+D+ YFCDC Y GKNC ++ C
Sbjct: 804 CLSNPCTNGAKCLDRVKDYFCDCHNGYKGKNCEQDINEC 842
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 43 PLYSLCPCAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKP 101
PL + C +PC +G C+ A C C Y G+ C ++ C + C NGG CK
Sbjct: 1909 PLCDIPFCEITPCDNGGLCLTTGAVPMCKCSLGYTGRLCEQDINECES-NPCQNGGQCKD 1967
Query: 102 YLVDETQHRFNCTCP-SGYHGKICEK 126
+ R+ C C +G+ G CE
Sbjct: 1968 LV-----GRYECDCQGTGFEGIRCEN 1988
Score = 33.1 bits (74), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 31/79 (39%), Gaps = 3/79 (3%)
Query: 58 GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPS 117
G C +K + C C Y G C+ C D C NGG C + + C CP
Sbjct: 2004 GRCFNKPGSFQCICQKPYCGAYCNF-TDPCNATDLCSNGGRCVESC--GAKPDYYCECPE 2060
Query: 118 GYHGKICEKITTMSFSGGS 136
G+ GK C T G S
Sbjct: 2061 GFAGKNCTAPITAKEDGPS 2079
Score = 32.7 bits (73), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 15/94 (15%)
Query: 36 DYRLIIRPLYSLCPCAYSPC-KHGSCV--DKRAGYFCDCPPTYGGKNCSVELTGCVGPDT 92
+ + I PL C +PC +G+CV C+CP Y G C V+ C
Sbjct: 341 ETEVNIHPL-----CQTNPCLNNGACVVIGGSGALTCECPKGYAGARCEVDTDECAS-QP 394
Query: 93 CLNGGTCKPYLVDETQHRFNCTCP-SGYHGKICE 125
C N G+C + + F+C C +GY G C+
Sbjct: 395 CQNNGSCIDRI-----NGFSCDCSGTGYTGAFCQ 423
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 50 CAYSPCKHG-SCVDKRAG-YFCDCPPTYGGKNCSVELTGC-VGPDTCLNGGTCKPYLVDE 106
CA PC++G CVD G Y C C + G+ C ++ C + P C NG +
Sbjct: 611 CATQPCQNGGECVDLPNGDYECKCTRGWTGRTCGNDVDECTLHPKICGNG------ICKN 664
Query: 107 TQHRFNCTCPSGYHGKICE 125
+ + C C G+ G C+
Sbjct: 665 EKGSYKCYCTPGFTGVHCD 683
Score = 30.4 bits (67), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 58 GSCVDKRAGYFCDCPPTYGGKNCSV 82
G+C+DK G+ C CPP Y G+ C +
Sbjct: 475 GTCLDKPIGFQCLCPPEYTGELCQI 499
Score = 29.3 bits (64), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 6/64 (9%)
Query: 62 DKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHG 121
+ +GY C C P GKNC + + C + C G C + + C C G+ G
Sbjct: 881 ENASGYECVCVPGIIGKNCEININEC-DSNPCSKHGNCNDGI-----GTYTCECEPGFEG 934
Query: 122 KICE 125
CE
Sbjct: 935 THCE 938
>sp|Q5IJ48|CRUM2_HUMAN Protein crumbs homolog 2 OS=Homo sapiens GN=CRB2 PE=1 SV=2
Length = 1285
Score = 78.6 bits (192), Expect = 1e-14, Method: Composition-based stats.
Identities = 43/90 (47%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C PC HG +C D AGY C CP T+GG++CSV+LTGC G TC TC P + +
Sbjct: 362 CLSDPCLHGGTCSDTVAGYICRCPETWGGRDCSVQLTGCQG-HTCPLAATCIP-IFESGV 419
Query: 109 HRFNCTCPSGYHGKICEKITTMSFSGGSHI 138
H + C CP G HG C + TT S GS I
Sbjct: 420 HSYVCHCPPGTHGPFCGQNTTFSVMAGSPI 449
Score = 56.2 bits (134), Expect = 7e-08, Method: Composition-based stats.
Identities = 34/99 (34%), Positives = 44/99 (44%), Gaps = 28/99 (28%)
Query: 50 CAYSPCKHGSCVDKR----------------------AGYFCDCPPTYGGKNCSVELTGC 87
CA SPC+HG +R AG+ C CPP + G +C VE+ C
Sbjct: 265 CASSPCQHGGRCLQRSDPALYGGVQAAFPGAFSFRHAAGFLCHCPPGFEGADCGVEVDEC 324
Query: 88 VGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICEK 126
CLNGG C+ + + F C CP GY G CE+
Sbjct: 325 AS-RPCLNGGHCQ-----DLPNGFQCHCPDGYAGPTCEE 357
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/79 (39%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA +PC HG SC+D + C C P YGG C ++L C C +GGTC +
Sbjct: 150 CASAPCLHGGSCLDGVGSFRCVCAPGYGGTRCQLDLDECQS-QPCAHGGTCHDLV----- 203
Query: 109 HRFNCTCP-SGYHGKICEK 126
+ F C C +GY G CE+
Sbjct: 204 NGFRCDCAGTGYEGTHCER 222
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA PC HG +C + Y C CP Y G C +E+ C CL+GG+C +
Sbjct: 112 CASRPCHHGATCRNLADRYECHCPLGYAGVTCEMEVDECASA-PCLHGGSCL-----DGV 165
Query: 109 HRFNCTCPSGYHGKICE 125
F C C GY G C+
Sbjct: 166 GSFRCVCAPGYGGTRCQ 182
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 8/80 (10%)
Query: 49 PCAYSPCKHGSCVDKRAGYF-CDCPPTYGGKNCSVELTG--CVGPDTCLNGGTCKPYLVD 105
PC +PC G C G F C CPP +GG C + + C TCL+G C +
Sbjct: 1097 PCHSAPCARGRCHTHPDGRFECRCPPGFGGPRCRLPVPSKECSLNVTCLDGSPC-----E 1151
Query: 106 ETQHRFNCTCPSGYHGKICE 125
NC+C G G+ C+
Sbjct: 1152 GGSPAANCSCLEGLAGQRCQ 1171
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 38/92 (41%), Gaps = 18/92 (19%)
Query: 50 CAYSPCKH-GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTC----KPYLV 104
CA +PC+H SC++ + C C P Y G+ C V+ C C +GG C P L
Sbjct: 227 CASAPCEHNASCLEGLGSFRCLCWPGYSGELCEVDEDECAS-SPCQHGGRCLQRSDPALY 285
Query: 105 DETQHRFN------------CTCPSGYHGKIC 124
Q F C CP G+ G C
Sbjct: 286 GGVQAAFPGAFSFRHAAGFLCHCPPGFEGADC 317
Score = 40.0 bits (92), Expect = 0.006, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 31/76 (40%), Gaps = 7/76 (9%)
Query: 50 CAYSPCKH-GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA SPC H G+C D + C C P + G C + D C + +
Sbjct: 1060 CAPSPCLHDGACRDLFDAFACACGPGWEGPRCEAHV------DPCHSAPCARGRCHTHPD 1113
Query: 109 HRFNCTCPSGYHGKIC 124
RF C CP G+ G C
Sbjct: 1114 GRFECRCPPGFGGPRC 1129
Score = 37.7 bits (86), Expect = 0.025, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 10/60 (16%)
Query: 72 PPTYGGKNCSVELTGCVG-----PDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICEK 126
P GG+ GCV PD C NGGTC LV T + F+CTCP+ + G C +
Sbjct: 790 PSELGGRQSWNLTAGCVSEDMCSPDPCFNGGTC---LV--TWNDFHCTCPANFTGPTCAQ 844
>sp|Q80YA8|CRUM2_MOUSE Protein crumbs homolog 2 OS=Mus musculus GN=Crb2 PE=2 SV=3
Length = 1282
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 40/90 (44%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C PC HG +C D AGY C CP +GG +CSV+LTGC G TC TC P
Sbjct: 366 CQSEPCLHGGTCSDTVAGYICQCPEAWGGHDCSVQLTGCQG-HTCPLAATCIPTF-KSGL 423
Query: 109 HRFNCTCPSGYHGKICEKITTMSFSGGSHI 138
H + C CP G +G C + TT S GS +
Sbjct: 424 HGYFCRCPPGTYGPFCGQNTTFSVVSGSSV 453
Score = 49.7 bits (117), Expect = 7e-06, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C+ +PC HG SC+D Y C C P Y G NC +++ C C +GG C +
Sbjct: 154 CSSAPCLHGGSCLDGVGSYRCVCAPGYAGANCQLDVDECQS-QPCAHGGVCHDLV----- 207
Query: 109 HRFNCTCP-SGYHGKICEK 126
+ F C C +GY G CE+
Sbjct: 208 NGFRCDCADTGYEGARCEQ 226
Score = 46.6 bits (109), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 8/63 (12%)
Query: 65 AGYFCDCPPTYGGKNCSVELTGCV-GPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKI 123
AG+ C CP + G +CS+++ C GP CLNGG+C+ + + F C C GY G
Sbjct: 306 AGFLCSCPLGFAGNDCSMDVDECASGP--CLNGGSCQ-----DLPNGFQCYCQDGYTGLT 358
Query: 124 CEK 126
C++
Sbjct: 359 CQE 361
Score = 46.6 bits (109), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA PC+HG +C + Y C CP Y G C E+ C CL+GG+C +
Sbjct: 116 CASRPCQHGGTCQNLADHYECHCPLGYAGVTCEAEVDECSSA-PCLHGGSCL-----DGV 169
Query: 109 HRFNCTCPSGYHGKICE 125
+ C C GY G C+
Sbjct: 170 GSYRCVCAPGYAGANCQ 186
Score = 42.7 bits (99), Expect = 8e-04, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 8/82 (9%)
Query: 49 PCAYSPCKHGSCVDKRAGYF-CDCPPTYGGKNCSVEL--TGCVGPDTCLNGGTCKPYLVD 105
PC +PC G C + G F C CPP + G C + + GC TC +G C+ +
Sbjct: 1094 PCRSTPCVRGQCHARPDGRFECRCPPGFSGPRCRLPVLPQGCNLNSTCKDGAPCEGGPLG 1153
Query: 106 ETQHRFNCTCPSGYHGKICEKI 127
NC+C G G C+ +
Sbjct: 1154 T-----NCSCQEGLAGLRCQSL 1170
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 32/93 (34%), Positives = 40/93 (43%), Gaps = 20/93 (21%)
Query: 50 CAYSPCKH-GSCVDKRAGYFCDCPPTYGGKNCSVELTGCV-GPDTCLNGGTC----KPYL 103
CA +PC H SC+D + C C P + G+ C V+ C GP C NGG C P L
Sbjct: 231 CASAPCAHNASCLDGFRSFRCLCWPGFSGERCEVDEDECASGP--CQNGGQCLQRSDPTL 288
Query: 104 VDETQHRFN------------CTCPSGYHGKIC 124
Q F C+CP G+ G C
Sbjct: 289 YGGVQAIFPGAFSFSHAAGFLCSCPLGFAGNDC 321
Score = 40.4 bits (93), Expect = 0.005, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 30/76 (39%), Gaps = 7/76 (9%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C+ SPC HG +C D + C C P + G C + C +P
Sbjct: 1057 CSPSPCLHGGACRDLFDAFACSCGPAWEGPRCEIRADPCRSTPCVRGQCHARP------D 1110
Query: 109 HRFNCTCPSGYHGKIC 124
RF C CP G+ G C
Sbjct: 1111 GRFECRCPPGFSGPRC 1126
Score = 36.2 bits (82), Expect = 0.079, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 49 PCAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVEL 84
PC PC HG +CVD + CDCP Y G C+ E+
Sbjct: 612 PCQPLPCAHGGACVDLWTHFRCDCPRPYRGATCTDEV 648
Score = 30.0 bits (66), Expect = 6.6, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 10/46 (21%)
Query: 86 GCVGPDTC-----LNGGTCKPYLVDETQHRFNCTCPSGYHGKICEK 126
GCV DTC NGGTC T + F CTC + G C +
Sbjct: 807 GCVSEDTCNPNPCFNGGTCHV-----TWNDFYCTCSENFTGPTCAQ 847
>sp|P82279|CRUM1_HUMAN Protein crumbs homolog 1 OS=Homo sapiens GN=CRB1 PE=1 SV=2
Length = 1406
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 57/100 (57%), Gaps = 9/100 (9%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCP------PTYGGKNCSVELTGCVGPDTCLNGGTCKPY 102
C+ +PC++G +C + Y C CP YGG++CS L GC CLN GTC P+
Sbjct: 401 CSSNPCQNGGTCENLPGNYTCHCPFDNLSRTFYGGRDCSDILLGCTH-QQCLNNGTCIPH 459
Query: 103 LVDETQHRFNCTCPSGYHGKICEKITTMSFSGGSHIMLNT 142
D QH F+C CPSGY G +CE TT+SF G + + +
Sbjct: 460 FQD-GQHGFSCLCPSGYTGSLCEIATTLSFEGDGFLWVKS 498
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 6/77 (7%)
Query: 50 CAYSPCKHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQH 109
C +PC HG+C D+ A Y C C P Y G NC V++ C C NG TC + +
Sbjct: 1181 CFSNPCIHGNCSDRVAAYHCTCEPGYTGVNCEVDIDNCQS-HQCANGATCISHT-----N 1234
Query: 110 RFNCTCPSGYHGKICEK 126
++C C + GK C +
Sbjct: 1235 GYSCLCFGNFTGKFCRQ 1251
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA SPC++G+ C D GY C C P Y G++C +E+ C D C N TC +
Sbjct: 152 CASSPCQNGAVCQDGIDGYSCFCVPGYQGRHCDLEVDECAS-DPCKNEATCLNEI----- 205
Query: 109 HRFNCTCPSGYHGKICE 125
R+ C CP Y G CE
Sbjct: 206 GRYTCICPHNYSGVNCE 222
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 10/102 (9%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C PC +G+ C D YFCDC P + G +C + C CL+GG C + +
Sbjct: 228 CWSQPCLNGATCQDALGAYFCDCAPGFLGDHCELNTDECAS-QPCLHGGLCV-----DGE 281
Query: 109 HRFNCTCP-SGYHGKICEKITTMSFSGGSHIMLNTTREEGYD 149
+R++C C SG+ G CE + + +S H N T E+ D
Sbjct: 282 NRYSCNCTGSGFTGTHCETLMPLCWSKPCHN--NATCEDSVD 321
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 50 CAYSPCKH-GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA PCK+ +C+++ Y C CP Y G NC +E+ C CLNG TC+ L
Sbjct: 190 CASDPCKNEATCLNEIGRYTCICPHNYSGVNCELEIDECWS-QPCLNGATCQDAL----- 243
Query: 109 HRFNCTCPSGYHGKICE 125
+ C C G+ G CE
Sbjct: 244 GAYFCDCAPGFLGDHCE 260
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 49 PCAYSPCK-HGSCVDK--RAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVD 105
PC +PC+ +CV+ + C CPP Y G C + C G ++C +GG C +
Sbjct: 73 PCFSNPCQGSATCVNTPGERSFLCKCPPGYSGTICETTIGSC-GKNSCQHGGICHQDPIY 131
Query: 106 ETQHRFNCTCPSGYHGKICE 125
C CP+GY G+ CE
Sbjct: 132 PV-----CICPAGYAGRFCE 146
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Query: 32 MLKSDYRLIIRPLYSLCPCAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGP 90
LK ++ L C +PC HG +C D + Y C CP + GK+C + + C
Sbjct: 1125 FLKISTNSVVTGCLQLNVCNSNPCLHGGNCEDIYSSYHCSCPLGWSGKHCELNIDECFS- 1183
Query: 91 DTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICE 125
+ C++G + ++CTC GY G CE
Sbjct: 1184 NPCIHGN------CSDRVAAYHCTCEPGYTGVNCE 1212
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 58 GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPS 117
G+C + + C C P + G+ C ++ C D C+NGG C+ L ++F C C
Sbjct: 1272 GNCTEFQTELKCMCRPGFTGEWCEKDIDECAS-DPCVNGGLCQDLL-----NKFQCLCDV 1325
Query: 118 GYHGKICE 125
+ G+ CE
Sbjct: 1326 AFAGERCE 1333
Score = 34.3 bits (77), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 7/77 (9%)
Query: 50 CAYSPCKHGSCVDKRAGY-FCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C + C+HG + Y C CP Y G+ C ++ C C NG C+ +
Sbjct: 114 CGKNSCQHGGICHQDPIYPVCICPAGYAGRFCEIDHDECAS-SPCQNGAVCQDGI----- 167
Query: 109 HRFNCTCPSGYHGKICE 125
++C C GY G+ C+
Sbjct: 168 DGYSCFCVPGYQGRHCD 184
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 10/57 (17%)
Query: 86 GCVGPDTCL-----NGGTCKPYLVDETQHRFNCTCPSGYHGKICEKITTMSFSGGSH 137
GC G ++C NGG C D F+C+CP+ GK CE++ FS H
Sbjct: 884 GCAGDNSCKSNPCHNGGVCHSRWDD-----FSCSCPALTSGKACEEVQWCGFSPCPH 935
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 35/93 (37%), Gaps = 17/93 (18%)
Query: 50 CAYSPC-KHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C PC + +C D Y C C P Y G C ++L C + C + G C ++
Sbjct: 305 CWSKPCHNNATCEDSVDNYTCHCWPGYTGAQCEIDLNEC-NSNPCQSNGECVELSSEKQY 363
Query: 109 HR---------------FNCTCPSGYHGKICEK 126
R + C C G+ G CE+
Sbjct: 364 GRITGLPSSFSYHEASGYVCICQPGFTGIHCEE 396
Score = 29.6 bits (65), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C +PC +G C + + C CP GK C E+ C G C +G C+P L
Sbjct: 891 CKSNPCHNGGVCHSRWDDFSCSCPALTSGKACE-EVQWC-GFSPCPHGAQCQPVL----- 943
Query: 109 HRFNCTCPSGYHGK 122
F C + ++G+
Sbjct: 944 QGFECIANAVFNGQ 957
>sp|Q8TDW7|FAT3_HUMAN Protocadherin Fat 3 OS=Homo sapiens GN=FAT3 PE=2 SV=2
Length = 4589
Score = 66.6 bits (161), Expect = 6e-11, Method: Composition-based stats.
Identities = 32/79 (40%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 50 CAYSPCKHG-SCVD-KRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDET 107
C SPC+HG SC GY C C + G+NC E+T C P+ C NGG+C P
Sbjct: 4025 CKRSPCQHGGSCTGLPSGGYQCTCLSQFTGRNCESEITACF-PNPCRNGGSCDP-----I 4078
Query: 108 QHRFNCTCPSGYHGKICEK 126
+ F C C +G G CE+
Sbjct: 4079 GNTFICNCKAGLTGVTCEE 4097
Score = 30.4 bits (67), Expect = 4.1, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 58 GSCVDKRAGYFCDCPPTYGGKNCSV 82
GSCV+ + C+C P Y G+ C +
Sbjct: 4111 GSCVNVFGSFLCNCTPGYVGQYCGL 4135
>sp|Q8BNA6|FAT3_MOUSE Protocadherin Fat 3 OS=Mus musculus GN=Fat3 PE=1 SV=2
Length = 4555
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/78 (41%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 50 CAYSPCKHG-SCVD-KRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDET 107
C SPC HG SC GY C C + G NC E+T C P+ C NGG+C P
Sbjct: 4024 CQRSPCLHGGSCSSLPSGGYQCSCLSQFTGTNCESEITACF-PNPCRNGGSCDP-----I 4077
Query: 108 QHRFNCTCPSGYHGKICE 125
+ F C+C +G G CE
Sbjct: 4078 GNTFVCSCKAGLTGVTCE 4095
Score = 34.3 bits (77), Expect = 0.28, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSV 82
C C++G SCV+ +FC+C P Y G+ C +
Sbjct: 4101 CEREECENGGSCVNLFGSFFCNCTPGYVGQYCGL 4134
>sp|Q8R508|FAT3_RAT Protocadherin Fat 3 OS=Rattus norvegicus GN=Fat3 PE=1 SV=1
Length = 4555
Score = 63.9 bits (154), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/78 (41%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 50 CAYSPCKHG-SCVD-KRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDET 107
C SPC HG SC GY C C + G NC E+T C P+ C NGG+C P
Sbjct: 4024 CQRSPCLHGGSCSGLPSGGYQCSCLSQFTGTNCESEITACF-PNPCRNGGSCDP-----I 4077
Query: 108 QHRFNCTCPSGYHGKICE 125
+ F C+C +G G CE
Sbjct: 4078 GNTFICSCKAGLTGVTCE 4095
Score = 34.3 bits (77), Expect = 0.28, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSV 82
C C++G SCV+ +FC+C P Y G+ C +
Sbjct: 4101 CEREECENGGSCVNLFGSFFCNCTPGYVGQYCGL 4134
>sp|Q9NYQ7|CELR3_HUMAN Cadherin EGF LAG seven-pass G-type receptor 3 OS=Homo sapiens
GN=CELSR3 PE=1 SV=2
Length = 3312
Score = 63.5 bits (153), Expect = 5e-10, Method: Composition-based stats.
Identities = 35/101 (34%), Positives = 50/101 (49%), Gaps = 11/101 (10%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTG--CVGPDTCLNGGTCKPYLVDE 106
C +PC++G +C + GY C C P + G++C ++ CV P C NGGTC D
Sbjct: 1439 CYSNPCRNGGACARREGGYTCVCRPRFTGEDCELDTEAGRCV-PGVCRNGGTC----TDA 1493
Query: 107 TQHRFNCTCPSG--YHGKICEKITTMSFSGGSHIMLNTTRE 145
F C CP+G + G CE + SF S +M R+
Sbjct: 1494 PNGGFRCQCPAGGAFEGPRCE-VAARSFPPSSFVMFRGLRQ 1533
Score = 46.6 bits (109), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 34/77 (44%), Gaps = 7/77 (9%)
Query: 50 CAYSPCK-HGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA PC H C D + C C P Y G C + C+ + C N G+C+ +
Sbjct: 1950 CASGPCPPHADCRDLWQTFSCTCQPGYYGPGC---VDACL-LNPCQNQGSCRH--LPGAP 2003
Query: 109 HRFNCTCPSGYHGKICE 125
H + C C GY G CE
Sbjct: 2004 HGYTCDCVGGYFGHHCE 2020
Score = 38.5 bits (88), Expect = 0.018, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 50 CAYSPCKH-GSCVDKRAGYFCDCPPTYGGKNCSVEL 84
C PCK+ G C ++ + CDCP +GGK+C + +
Sbjct: 1726 CDSGPCKNSGFCSERWGSFSCDCPVGFGGKDCQLTM 1761
Score = 30.8 bits (68), Expect = 3.3, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 86 GCVGPDTCLNGGTCKPYL-VDETQHRFNCTCPSGYHGKIC 124
GCV + C +G C P+ + F+CTC GY+G C
Sbjct: 1943 GCVVTNACASG-PCPPHADCRDLWQTFSCTCQPGYYGPGC 1981
Score = 30.8 bits (68), Expect = 3.5, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 22/47 (46%), Gaps = 8/47 (17%)
Query: 80 CSVELTGC-VGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICE 125
C +L C GP C N G C E F+C CP G+ GK C+
Sbjct: 1719 CQAKLHFCDSGP--CKNSGFCS-----ERWGSFSCDCPVGFGGKDCQ 1758
>sp|Q19319|CADH4_CAEEL Cadherin-4 OS=Caenorhabditis elegans GN=cdh-4 PE=1 SV=3
Length = 4292
Score = 62.8 bits (151), Expect = 8e-10, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 49 PCAYSPCKH-GSCVDKRAGYF-CDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDE 106
PC PC+H G+C+ + +F C+CP Y G C ++L C C G C P+ D
Sbjct: 3896 PCNDLPCQHAGTCISQGKSHFKCECPSRYSGNVCEIDLEPCAS-SPCPTGIQCIPFYND- 3953
Query: 107 TQHRFNCTCPSGYHGKICE 125
+ C CP+G+ GK CE
Sbjct: 3954 ----YLCKCPNGFTGKHCE 3968
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 24/56 (42%), Gaps = 4/56 (7%)
Query: 69 CDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKIC 124
C CP +GGK C VE C C C P + + T + C CP G G C
Sbjct: 3656 CLCPDGFGGKRCEVETNQC-AKSPCEQWQLCIPSVHNST---YECVCPLGMEGDKC 3707
>sp|O88278|CELR3_RAT Cadherin EGF LAG seven-pass G-type receptor 3 OS=Rattus norvegicus
GN=Celsr3 PE=2 SV=1
Length = 3313
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 11/101 (10%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTG--CVGPDTCLNGGTCKPYLVDE 106
C +PC++G +C + GY C C P + G++C ++ CV P C NGGTC +
Sbjct: 1430 CYSNPCRNGGACARREGGYTCVCRPRFTGEDCELDTEAGRCV-PGVCRNGGTC----TNA 1484
Query: 107 TQHRFNCTCPSG--YHGKICEKITTMSFSGGSHIMLNTTRE 145
F C CP+G + G CE + SF S +M R+
Sbjct: 1485 PNGGFRCQCPAGGAFEGPRCE-VAARSFPPSSFVMFRGLRQ 1524
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 49 PCAYSPCK-HGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDET 107
PCA PC H +C D + C C P Y G C + C+ + C N G+C+ +
Sbjct: 1940 PCASGPCPPHANCKDLWQTFSCTCWPGYYGPGC---VDACL-LNPCQNQGSCRH--LQGG 1993
Query: 108 QHRFNCTCPSGYHGKICE 125
H + C C SGY G+ CE
Sbjct: 1994 PHGYTCDCASGYFGQHCE 2011
Score = 43.9 bits (102), Expect = 4e-04, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVEL 84
CA PCK+G C ++ G+ CDCP +GGK+C + +
Sbjct: 1717 CASGPCKNGGLCSERWGGFSCDCPVGFGGKDCRLTM 1752
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 6/61 (9%)
Query: 65 AGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKIC 124
AG C CPP + G C EL C + C NGG C + + C C + G+ C
Sbjct: 1408 AGLRCRCPPGFTGDFCETELDLCYS-NPCRNGGACA-----RREGGYTCVCRPRFTGEDC 1461
Query: 125 E 125
E
Sbjct: 1462 E 1462
Score = 30.8 bits (68), Expect = 3.4, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 7/36 (19%)
Query: 89 GPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKIC 124
GP C NGG C E F+C CP G+ GK C
Sbjct: 1720 GP--CKNGGLCS-----ERWGGFSCDCPVGFGGKDC 1748
>sp|Q8VHS2|CRUM1_MOUSE Protein crumbs homolog 1 OS=Mus musculus GN=Crb1 PE=1 SV=3
Length = 1405
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 56/117 (47%), Gaps = 13/117 (11%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCP------PTYGGKNCSVELTGCVGPDTCLNGGTCKPY 102
C PC +G +C + Y C CP YGG+NCS L GC CLN G C P+
Sbjct: 400 CLLHPCLNGGTCENLPGNYACHCPFDDTSRTFYGGENCSEILLGCTH-HQCLNNGKCIPH 458
Query: 103 LVDETQHRFNCTCPSGYHGKICEKITTMSFSGGSHIMLNTTREEGY----DISFILH 155
+ QH F C C SGY G +CE +TT+SF + + + G +IS H
Sbjct: 459 FQN-GQHGFTCQCLSGYAGPLCETVTTLSFGSNGFLWVTSGSHTGIGPECNISLRFH 514
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 50 CAYSPCKHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQH 109
C SPC HG+C D A Y C C P Y G NC V++ C C NG TC P H
Sbjct: 1180 CFSSPCIHGNCSDGVAAYHCRCEPGYTGVNCEVDVDNCKS-HQCANGATCVP-----EAH 1233
Query: 110 RFNCTCPSGYHGKICE 125
++C C + G+ C
Sbjct: 1234 GYSCLCFGNFTGRFCR 1249
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 40/80 (50%), Gaps = 9/80 (11%)
Query: 49 PCAYSPCKH-GSCVD--KRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVD 105
PC SPC+ +CV + C CPP Y G NC C G + C +GGTC+
Sbjct: 72 PCFSSPCQGIATCVKIPGEGNFLCQCPPGYSGLNCETATNSC-GGNLCQHGGTCR----K 126
Query: 106 ETQHRFNCTCPSGYHGKICE 125
+ +H C CP GY G+ CE
Sbjct: 127 DPEHPV-CICPPGYAGRFCE 145
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA SPC +G+ C D GY C C P Y G++C +E+ CV D C N C +
Sbjct: 151 CASSPCHNGAMCQDGINGYSCFCVPGYQGRHCDLEVDECVS-DPCKNEAVCLNEI----- 204
Query: 109 HRFNCTCPSGYHGKICE 125
R+ C CP + G CE
Sbjct: 205 GRYTCVCPQEFSGVNCE 221
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 55/108 (50%), Gaps = 11/108 (10%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C PC HG+ C D GY CDC P + G++C + + C CL+GG C + +
Sbjct: 227 CRSQPCLHGATCQDAPGGYSCDCAPGFLGEHCELSVNECES-QPCLHGGLCV-----DGR 280
Query: 109 HRFNCTCP-SGYHGKICEKITTMSFSGGSHIMLNTTREEGYDISFILH 155
+ ++C C SG+ G CE + + +S H + T E+ D S+I H
Sbjct: 281 NSYHCDCTGSGFTGMHCESLIPLCWSKPCHN--DATCEDTVD-SYICH 325
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C PCK+ + C+++ Y C CP + G NC +E+ C CL+G TC+ +
Sbjct: 189 CVSDPCKNEAVCLNEIGRYTCVCPQEFSGVNCELEIDECRS-QPCLHGATCQ-----DAP 242
Query: 109 HRFNCTCPSGYHGKICE 125
++C C G+ G+ CE
Sbjct: 243 GGYSCDCAPGFLGEHCE 259
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 6/68 (8%)
Query: 58 GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPS 117
GSC + + C C P + G+ C ++ C D C+NGG C+ + +RF C C
Sbjct: 1271 GSCSMFQEDWQCMCWPGFTGEWCEEDINECAS-DPCINGGLCRDLV-----NRFLCICDV 1324
Query: 118 GYHGKICE 125
+ G+ CE
Sbjct: 1325 AFAGERCE 1332
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 38/82 (46%), Gaps = 8/82 (9%)
Query: 46 SLCPCAYSPCKHGS-CVDKRAGYFCDCPPT-YGGKNCSVELTGCVGPDTCLNGGTCKPYL 103
S+ C PC HG CVD R Y CDC + + G +C + C C N TC
Sbjct: 261 SVNECESQPCLHGGLCVDGRNSYHCDCTGSGFTGMHCESLIPLCWS-KPCHNDATC---- 315
Query: 104 VDETQHRFNCTCPSGYHGKICE 125
++T + C C GY G +CE
Sbjct: 316 -EDTVDSYICHCRPGYTGALCE 336
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C + C+HG +C C CPP Y G+ C + C C NG C+ +
Sbjct: 113 CGGNLCQHGGTCRKDPEHPVCICPPGYAGRFCETDHNECAS-SPCHNGAMCQDGI----- 166
Query: 109 HRFNCTCPSGYHGKICE 125
+ ++C C GY G+ C+
Sbjct: 167 NGYSCFCVPGYQGRHCD 183
Score = 33.9 bits (76), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 39/95 (41%), Gaps = 8/95 (8%)
Query: 32 MLKSDYRLIIRPLYSLCPCAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGP 90
LK +++ C SPC HG +C D + Y C C + G +C + + C
Sbjct: 1124 FLKVSTNMVLTGCLPSNACHSSPCLHGGNCEDSYSSYRCACLSGWSGTHCEINIDECFS- 1182
Query: 91 DTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICE 125
C++G + ++C C GY G CE
Sbjct: 1183 SPCIHGN------CSDGVAAYHCRCEPGYTGVNCE 1211
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 10/53 (18%)
Query: 86 GCVGPDTCL-----NGGTCKPYLVDETQHRFNCTCPSGYHGKICEKITTMSFS 133
GC G +TC NGG C D F+C+CP+ G+ CE++ S
Sbjct: 883 GCPGDNTCKSNPCHNGGVCHSLWDD-----FSCSCPTNTAGRACEQVQWCQLS 930
Score = 29.3 bits (64), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 50 CAYSPCKH-GSCVDKRAGYFCDCPPTYGGKNCSVE-LTGCVGPD 91
C PC++ G C++ GY C+C Y G NC E + G G D
Sbjct: 675 CESQPCQNRGRCINLWQGYQCECDRPYTGSNCLKEYVAGRFGQD 718
>sp|Q9HCU4|CELR2_HUMAN Cadherin EGF LAG seven-pass G-type receptor 2 OS=Homo sapiens
GN=CELSR2 PE=1 SV=1
Length = 2923
Score = 62.0 bits (149), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/98 (38%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 50 CAYSPC-KHGSCVDKRAGYFCDCPPTYGGKNCSVEL-TGCVGPDTCLNGGTCKPYLVDET 107
C PC HG C + GY C C Y G++C V +G P C NGGTC LV
Sbjct: 1292 CYSRPCGPHGRCRSREGGYTCLCRDGYTGEHCEVSARSGRCTPGVCKNGGTCVNLLVGG- 1350
Query: 108 QHRFNCTCPSGYHGKICEKITTMSFSGGSHIMLNTTRE 145
F C CPSG K ++TT SF S I R+
Sbjct: 1351 ---FKCDCPSGDFEKPYCQVTTRSFPAHSFITFRGLRQ 1385
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 33/80 (41%), Gaps = 11/80 (13%)
Query: 49 PCAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCS--VELTGCVGPDTCLNGGTCKPYLVD 105
PC +PC S C + Y C C P Y G NC+ +L C C T KP
Sbjct: 1796 PCDSNPCPANSYCSNDWDSYSCSCDPGYYGDNCTNVCDLNPCEHQSVC----TRKP---- 1847
Query: 106 ETQHRFNCTCPSGYHGKICE 125
H + C CP Y G CE
Sbjct: 1848 SAPHGYTCECPPNYLGPYCE 1867
Score = 36.2 bits (82), Expect = 0.081, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 11/82 (13%)
Query: 50 CAYSPCKHGSCVDKRA----GYFCDCPPTYGGKNCSVELT-----GCVGPDTC--LNGGT 98
C +PC+H S ++ GY C+CPP Y G C + G G TC N
Sbjct: 1832 CDLNPCEHQSVCTRKPSAPHGYTCECPPNYLGPYCETRIDQPCPRGWWGHPTCGPCNCDV 1891
Query: 99 CKPYLVDETQHRFNCTCPSGYH 120
K + D + C C ++
Sbjct: 1892 SKGFDPDCNKTSGECHCKENHY 1913
Score = 35.0 bits (79), Expect = 0.17, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 6/43 (13%)
Query: 48 CP-----CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVEL 84
CP C + C +G +CV++ + C+CP +GGK+C+ E+
Sbjct: 1571 CPAKKNVCDSNTCHNGGTCVNQWDAFSCECPLGFGGKSCAQEM 1613
Score = 32.7 bits (73), Expect = 0.93, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 5/36 (13%)
Query: 91 DTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICEK 126
+TC NGGTC F+C CP G+ GK C +
Sbjct: 1581 NTCHNGGTCV-----NQWDAFSCECPLGFGGKSCAQ 1611
>sp|Q9QYP2|CELR2_RAT Cadherin EGF LAG seven-pass G-type receptor 2 (Fragment) OS=Rattus
norvegicus GN=Celsr2 PE=2 SV=1
Length = 2144
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/98 (38%), Positives = 45/98 (45%), Gaps = 6/98 (6%)
Query: 50 CAYSPC-KHGSCVDKRAGYFCDCPPTYGGKNCSVEL-TGCVGPDTCLNGGTCKPYLVDET 107
C PC HG C + GY C C Y G++C V +G P C NGGTC LV
Sbjct: 517 CYSRPCGPHGHCRSREGGYTCLCRDGYTGEHCEVSARSGRCTPGVCKNGGTCVNLLVGG- 575
Query: 108 QHRFNCTCPSGYHGKICEKITTMSFSGGSHIMLNTTRE 145
F C CPSG K ++TT SF S I R+
Sbjct: 576 ---FKCDCPSGDFEKPFCQVTTRSFPARSFITFRGLRQ 610
Score = 41.2 bits (95), Expect = 0.003, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 32/80 (40%), Gaps = 11/80 (13%)
Query: 49 PCAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCS--VELTGCVGPDTCLNGGTCKPYLVD 105
PC +PC S C + Y C C P Y G NC+ +L C C T KP
Sbjct: 1021 PCDSNPCPTNSYCSNDWDSYSCSCDPGYYGDNCTNVCDLNPCEHQSAC----TRKP---- 1072
Query: 106 ETQHRFNCTCPSGYHGKICE 125
H + C C Y G CE
Sbjct: 1073 SAPHGYICECLPNYLGPYCE 1092
Score = 34.7 bits (78), Expect = 0.25, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 6/43 (13%)
Query: 48 CP-----CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVEL 84
CP C + C +G +CV++ + C+CP +GGK+C+ E+
Sbjct: 796 CPTKKNVCDSNTCHNGGTCVNQWDAFSCECPLGFGGKSCAQEM 838
Score = 32.3 bits (72), Expect = 1.1, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 11/82 (13%)
Query: 50 CAYSPCKHGSCVDKRA----GYFCDCPPTYGGKNCSVELT-----GCVGPDTC--LNGGT 98
C +PC+H S ++ GY C+C P Y G C + G G TC N
Sbjct: 1057 CDLNPCEHQSACTRKPSAPHGYICECLPNYLGPYCETRIDQPCPRGWWGHPTCGPCNCDV 1116
Query: 99 CKPYLVDETQHRFNCTCPSGYH 120
K + D + C C ++
Sbjct: 1117 SKGFDPDCNKTSGECHCKENHY 1138
Score = 32.3 bits (72), Expect = 1.3, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 5/36 (13%)
Query: 91 DTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICEK 126
+TC NGGTC F+C CP G+ GK C +
Sbjct: 806 NTCHNGGTCV-----NQWDAFSCECPLGFGGKSCAQ 836
>sp|P46531|NOTC1_HUMAN Neurogenic locus notch homolog protein 1 OS=Homo sapiens GN=NOTCH1
PE=1 SV=4
Length = 2555
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 50 CAYSPCKHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQH 109
CA SPC G+C+DK GY C C P Y G C++ + C G + C NGGTC+ + +
Sbjct: 645 CASSPCDSGTCLDKIDGYECACEPGYTGSMCNINIDECAG-NPCHNGGTCEDGI-----N 698
Query: 110 RFNCTCPSGYHGKIC 124
F C CP GYH C
Sbjct: 699 GFTCRCPEGYHDPTC 713
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 50 CAYSPC-KHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA +PC G+C+D AGY C+C Y G C V L C P C NGG C+ E
Sbjct: 795 CASNPCLNQGTCIDDVAGYKCNCLLPYTGATCEVVLAPCA-PSPCRNGGECR---QSEDY 850
Query: 109 HRFNCTCPSGYHGKICE 125
F+C CP+G+ G+ CE
Sbjct: 851 ESFSCVCPTGWQGQTCE 867
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 50 CAYSPCKHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQH 109
C +PC HG+C D GY CDC P + G NC + C + C+NGGTCK +
Sbjct: 720 CNSNPCVHGACRDSLNGYKCDCDPGWSGTNCDINNNECES-NPCVNGGTCK-----DMTS 773
Query: 110 RFNCTCPSGYHGKICE 125
+ CTC G+ G C+
Sbjct: 774 GYVCTCREGFSGPNCQ 789
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C SPC+HG SC + GY C C Y G+NC ++ C P+ C NGG+C D
Sbjct: 873 CVLSPCRHGASCQNTHGGYRCHCQAGYSGRNCETDIDDCR-PNPCHNGGSC----TDGIN 927
Query: 109 HRFNCTCPSGYHGKICEK 126
F C C G+ G CE+
Sbjct: 928 TAF-CDCLPGFRGTFCEE 944
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C+ SPC++G+ C D GY C C Y G NCS E+ C+ C NGGTC +
Sbjct: 1149 CSPSPCQNGATCTDYLGGYSCKCVAGYHGVNCSEEIDECLS-HPCQNGGTCL-----DLP 1202
Query: 109 HRFNCTCPSGYHGKICE 125
+ + C+CP G G CE
Sbjct: 1203 NTYKCSCPRGTQGVHCE 1219
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 7/79 (8%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGC-VGPDTCLNGGTCKPYLVDET 107
C + CK+G +CVD Y C CPP + G+ C+ ++ C + P+ C NGGTC T
Sbjct: 261 CPGNNCKNGGACVDGVNTYNCRCPPEWTGQYCTEDVDECQLMPNACQNGGTCH-----NT 315
Query: 108 QHRFNCTCPSGYHGKICEK 126
+NC C +G+ G+ C +
Sbjct: 316 HGGYNCVCVNGWTGEDCSE 334
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 44/93 (47%), Gaps = 12/93 (12%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C +PC +G SC D FCDC P + G C ++ C D C NG C +
Sbjct: 911 CRPNPCHNGGSCTDGINTAFCDCLPGFRGTFCEEDINECAS-DPCRNGANCT-----DCV 964
Query: 109 HRFNCTCPSGYHGKICEKIT-----TMSFSGGS 136
+ CTCP+G+ G CE T + F+GG+
Sbjct: 965 DSYTCTCPAGFSGIHCENNTPDCTESSCFNGGT 997
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Query: 59 SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSG 118
+CV + + C+C + G+ C + GC G C NGGTC + T F C CP+G
Sbjct: 1283 NCVQRVNDFHCECRAGHTGRRCESVINGCKG-KPCKNGGTCA--VASNTARGFICKCPAG 1339
Query: 119 YHGKICEK 126
+ G CE
Sbjct: 1340 FEGATCEN 1347
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 13/112 (11%)
Query: 49 PCAYSPCKH-GSC--VDKR--AGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYL 103
PC +PCK+ G+C VD+R A Y C C + G C L + C NGGTC
Sbjct: 62 PCLSTPCKNAGTCHVVDRRGVADYACSCALGFSGPLCLTPLDNACLTNPCRNGGTCDLLT 121
Query: 104 VDETQHRFNCTCPSGYHGKICEKITTMSFSGGSHIMLNTTREEGYDISFILH 155
+ E + C CP G+ GK C++ + S+ N + ++ S+I H
Sbjct: 122 LTE----YKCRCPPGWSGKSCQQADPCA----SNPCANGGQCLPFEASYICH 165
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 49 PCAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGC-VGPDTCLNGGTCKPYLVDE 106
PCA +PC +G C+ A Y C CPP++ G C ++ C P C +GGTC +
Sbjct: 143 PCASNPCANGGQCLPFEASYICHCPPSFHGPTCRQDVNECGQKPGLCRHGGTCHNEV--- 199
Query: 107 TQHRFNCTCPSGYHGKICEK 126
+ C C + + G CE+
Sbjct: 200 --GSYRCVCRATHTGPNCER 217
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Query: 58 GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPS 117
G+CVD + C CPP + G C ++ C CL+GGTC+ + + CTCP
Sbjct: 996 GTCVDGINSFTCLCPPGFTGSYCQHDVNECDS-QPCLHGGTCQ-----DGCGSYRCTCPQ 1049
Query: 118 GYHGKICEKI 127
GY G C+ +
Sbjct: 1050 GYTGPNCQNL 1059
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Query: 47 LCPCAYSPCKHGSCVDKRAGY---FCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYL 103
L PCA SPC++G + Y C CP + G+ C V++ CV C +G +C+
Sbjct: 830 LAPCAPSPCRNGGECRQSEDYESFSCVCPTGWQGQTCEVDINECV-LSPCRHGASCQ--- 885
Query: 104 VDETQHRFNCTCPSGYHGKICE 125
T + C C +GY G+ CE
Sbjct: 886 --NTHGGYRCHCQAGYSGRNCE 905
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C +PC +G +C D +GY C C + G NC + C + CLN GTC + D
Sbjct: 757 CESNPCVNGGTCKDMTSGYVCTCREGFSGPNCQTNINECAS-NPCLNQGTC---IDDVAG 812
Query: 109 HRFNCTCPSGYHGKICEKI 127
++ NC P Y G CE +
Sbjct: 813 YKCNCLLP--YTGATCEVV 829
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 8/74 (10%)
Query: 56 KHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGT--CKPYLVDETQHRFNC 113
+G+CVD+ GY C CPP + G+ C ++ C+ + C GT C + D F+C
Sbjct: 1240 NNGTCVDQVGGYSCTCPPGFVGERCEGDVNECLS-NPCDARGTQNCVQRVND-----FHC 1293
Query: 114 TCPSGYHGKICEKI 127
C +G+ G+ CE +
Sbjct: 1294 ECRAGHTGRRCESV 1307
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 6/73 (8%)
Query: 55 CKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNC 113
C+HG +C ++ Y C C T+ G NC C P C NGGTC+P + H C
Sbjct: 189 CRHGGTCHNEVGSYRCVCRATHTGPNCERPYVPC-SPSPCQNGGTCRP--TGDVTHE--C 243
Query: 114 TCPSGYHGKICEK 126
C G+ G+ CE+
Sbjct: 244 ACLPGFTGQNCEE 256
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 49 PCAYSPCKHGSCVDKRAG--YFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDE 106
PC+ SPC++G + C C P + G+NC + C G + C NGG C VD
Sbjct: 221 PCSPSPCQNGGTCRPTGDVTHECACLPGFTGQNCEENIDDCPG-NNCKNGGAC----VDG 275
Query: 107 TQHRFNCTCPSGYHGKICEK 126
+ +NC CP + G+ C +
Sbjct: 276 V-NTYNCRCPPEWTGQYCTE 294
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Query: 45 YSLCPCAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYL 103
Y + CA +PCK+G+ C+D Y C C Y G +C V++ C PD C + G+CK +
Sbjct: 527 YDVDECASTPCKNGAKCLDGPNTYTCVCTEGYTGTHCEVDIDEC-DPDPC-HYGSCKDGV 584
Query: 104 VDETQHRFNCTCPSGYHGKICE 125
F C C GY G CE
Sbjct: 585 A-----TFTCLCRPGYTGHHCE 601
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 50 CAYSPCKH-GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C +PC++ +C+D+ + C C P Y G +C V C CL+ G C +
Sbjct: 456 CVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEVNTDECAS-SPCLHNGRCLDKI----- 509
Query: 109 HRFNCTCPSGYHGKICE 125
+ F C CP+G+ G +C+
Sbjct: 510 NEFQCECPTGFTGHLCQ 526
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Query: 50 CAYSPCKH-GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA SPC H G C+DK + C+CP + G C ++ C C NG C +
Sbjct: 494 CASSPCLHNGRCLDKINEFQCECPTGFTGHLCQYDVDECAS-TPCKNGAKCL-----DGP 547
Query: 109 HRFNCTCPSGYHGKICE 125
+ + C C GY G CE
Sbjct: 548 NTYTCVCTEGYTGTHCE 564
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 13/84 (15%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGP-------DTCLNGGTCKP 101
C PC++G +C+D Y C CP G +C + + C P C N GTC
Sbjct: 1187 CLSHPCQNGGTCLDLPNTYKCSCPRGTQGVHCEINVDDCNPPVDPVSRSPKCFNNGTC-- 1244
Query: 102 YLVDETQHRFNCTCPSGYHGKICE 125
VD+ ++CTCP G+ G+ CE
Sbjct: 1245 --VDQVG-GYSCTCPPGFVGERCE 1265
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Query: 50 CAYSPCKHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQH 109
C PC +GSC D A + C C P Y G +C + C C +GGTC+ + +
Sbjct: 570 CDPDPCHYGSCKDGVATFTCLCRPGYTGHHCETNINECSS-QPCRHGGTCQ-----DRDN 623
Query: 110 RFNCTCPSGYHGKICE 125
+ C C G G CE
Sbjct: 624 AYLCFCLKGTTGPNCE 639
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 55 CKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNC 113
C+HG CVD + C C Y G C + C P C NG TC YL ++C
Sbjct: 1116 CQHGGLCVDAGNTHHCRCQAGYTGSYCEDLVDEC-SPSPCQNGATCTDYLGG-----YSC 1169
Query: 114 TCPSGYHGKICEK 126
C +GYHG C +
Sbjct: 1170 KCVAGYHGVNCSE 1182
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 7/82 (8%)
Query: 48 CPCAYSPCKH-GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDE 106
C +PC+H G C++ + C C Y G C +++ CV + C N TC + +
Sbjct: 416 CSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVS-NPCQNDATCLDQIGE- 473
Query: 107 TQHRFNCTCPSGYHGKICEKIT 128
F C C GY G CE T
Sbjct: 474 ----FQCICMPGYEGVHCEVNT 491
Score = 36.6 bits (83), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA + C HG+ C D+ A ++C+CP G C + C+ + C G C +
Sbjct: 339 CASAACFHGATCHDRVASFYCECPHGRTGLLCHLN-DACIS-NPCNEGSNCD---TNPVN 393
Query: 109 HRFNCTCPSGYHGKICEK 126
+ CTCPSGY G C +
Sbjct: 394 GKAICTCPSGYTGPACSQ 411
Score = 36.2 bits (82), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 8/76 (10%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C+ PC+HG +C D+ Y C C G NC + L C + + GTC +
Sbjct: 607 CSSQPCRHGGTCQDRDNAYLCFCLKGTTGPNCEINLDDCA--SSPCDSGTCLDKI----- 659
Query: 109 HRFNCTCPSGYHGKIC 124
+ C C GY G +C
Sbjct: 660 DGYECACEPGYTGSMC 675
Score = 34.3 bits (77), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 33/80 (41%), Gaps = 9/80 (11%)
Query: 50 CAYSPCKHGSCVDKR---AGYFCDCPPTYGGKNCSVELTGC-VGPDTCLNGGTCKPYLVD 105
C +PC GS D C CP Y G CS ++ C +G + C + G C
Sbjct: 376 CISNPCNEGSNCDTNPVNGKAICTCPSGYTGPACSQDVDECSLGANPCEHAGKCI----- 430
Query: 106 ETQHRFNCTCPSGYHGKICE 125
T F C C GY G CE
Sbjct: 431 NTLGSFECQCLQGYTGPRCE 450
Score = 33.1 bits (74), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 37/88 (42%), Gaps = 15/88 (17%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGC------VGPDT---CLNGGTC 99
C SPCK+G C Y C+CP + G C V C G D C +GG C
Sbjct: 1063 CDSSPCKNGGKCWQTHTQYRCECPSGWTGLYCDVPSVSCEVAAQRQGVDVARLCQHGGLC 1122
Query: 100 KPYLVDETQHRFNCTCPSGYHGKICEKI 127
+ + +C C +GY G CE +
Sbjct: 1123 V-----DAGNTHHCRCQAGYTGSYCEDL 1145
Score = 33.1 bits (74), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Query: 58 GSCVDKRAGYFCDCPPTYGGKNCSVELTG-CVGPDTCLNGGTCKPYLVDETQHRFNCTCP 116
G+C+ C C + G C + C+G + C N GTC+P + C CP
Sbjct: 1361 GTCISGPRSPTCLCLGPFTGPECQFPASSPCLGGNPCYNQGTCEPT---SESPFYRCLCP 1417
Query: 117 SGYHGKICEKITTMSFSGGS 136
+ ++G +C I SF GG+
Sbjct: 1418 AKFNGLLCH-ILDYSFGGGA 1436
Score = 32.7 bits (73), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 6/67 (8%)
Query: 58 GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPS 117
G+C + GY C C + G++CS + C C +G TC + F C CP
Sbjct: 310 GTCHNTHGGYNCVCVNGWTGEDCSENIDDCASA-ACFHGATCHDRVA-----SFYCECPH 363
Query: 118 GYHGKIC 124
G G +C
Sbjct: 364 GRTGLLC 370
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Query: 50 CAYSPCKHG-SCV---DKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTC 99
C PCK+G +C + G+ C CP + G C + C G CLNGGTC
Sbjct: 1311 CKGKPCKNGGTCAVASNTARGFICKCPAGFEGATCENDARTC-GSLRCLNGGTC 1363
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 8/77 (10%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA +PC +G +C D G+ C CP Y C E+ C N C ++
Sbjct: 682 CAGNPCHNGGTCEDGINGFTCRCPEGYHDPTCLSEVNEC-------NSNPCVHGACRDSL 734
Query: 109 HRFNCTCPSGYHGKICE 125
+ + C C G+ G C+
Sbjct: 735 NGYKCDCDPGWSGTNCD 751
>sp|Q2PZL6|FAT4_MOUSE Protocadherin Fat 4 OS=Mus musculus GN=Fat4 PE=1 SV=2
Length = 4981
Score = 60.8 bits (146), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 12/93 (12%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C +PC +G +C + G+ C CP + G+ C ++ C+ P C +G C+ +
Sbjct: 3868 CLPAPCHNGGTCHNLVGGFSCSCPEGFTGRACERDINECL-PSPCKHGAVCQNF-----P 3921
Query: 109 HRFNCTCPSGYHGKICEKITTM-----SFSGGS 136
FNC C +GY GK+CE F+GGS
Sbjct: 3922 GGFNCVCKTGYTGKMCESSVNYCECNPCFNGGS 3954
Score = 56.2 bits (134), Expect = 7e-08, Method: Composition-based stats.
Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 29/101 (28%)
Query: 49 PCAYSPCKHG-SCVDKRA----------------------GYFCDCPPTYGGKNCSVELT 85
PC + PC++G SC+ + A C C P Y G C V++
Sbjct: 3807 PCIHGPCQNGGSCLRRLAVGSALKIQESLPVIIVANEPLQPSQCKCVPGYAGSWCEVDID 3866
Query: 86 GCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICEK 126
C+ P C NGGTC + F+C+CP G+ G+ CE+
Sbjct: 3867 ECL-PAPCHNGGTCHNLV-----GGFSCSCPEGFTGRACER 3901
Score = 55.8 bits (133), Expect = 9e-08, Method: Composition-based stats.
Identities = 29/77 (37%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C SPCKHG+ C + G+ C C Y GK C + C + C NGG+C+ +
Sbjct: 3906 CLPSPCKHGAVCQNFPGGFNCVCKTGYTGKMCESSVNYCEC-NPCFNGGSCQSGV----- 3959
Query: 109 HRFNCTCPSGYHGKICE 125
+ C CP G GK CE
Sbjct: 3960 ESYYCHCPFGVFGKHCE 3976
Score = 40.4 bits (93), Expect = 0.004, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 18/79 (22%)
Query: 50 CAYSPC-KHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA +PC C+++ Y C PP G C NGG+C+P L+
Sbjct: 4405 CASNPCWGDLLCINQWYAYKC-VPP------------GDCASHPCQNGGSCEPGLLSG-- 4449
Query: 109 HRFNCTCPSGYHGKICEKI 127
+ C+CP + G+ CE +
Sbjct: 4450 --YTCSCPESHTGRTCETV 4466
Score = 40.4 bits (93), Expect = 0.004, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 18/103 (17%)
Query: 7 GGIRTLDLLHGKQFSIGTNSVLNVIM--------LKSDYRLIIRPLYSLCP-----CAYS 53
GGIR+L+ + ++ + ++ + +M L+ L + + CP CA +
Sbjct: 4112 GGIRSLEPILQRRGHVESHDFVGCVMEFAVNGRPLEPSQALAAQGILDQCPRLEGTCARN 4171
Query: 54 PCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLN 95
PC+HG +CVD + C C GK C +T PDT L+
Sbjct: 4172 PCQHGGTCVDFWSWQQCQCMEGLTGKYCEKSVT----PDTALS 4210
Score = 38.9 bits (89), Expect = 0.012, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Query: 50 CAYSPCKHGSCVDK--RAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCK 100
CA PC++G + +GY C CP ++ G+ C + C+G C G CK
Sbjct: 4431 CASHPCQNGGSCEPGLLSGYTCSCPESHTGRTCET-VVACLGV-LCPQGKVCK 4481
Score = 31.2 bits (69), Expect = 2.9, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 50 CAYSPC-KHGSCVDKRAGYFCDCPPTYGGKNCSVELTG 86
C +PC GSC Y+C CP GK+C + G
Sbjct: 3944 CECNPCFNGGSCQSGVESYYCHCPFGVFGKHCELNSYG 3981
Score = 30.0 bits (66), Expect = 6.3, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 9/67 (13%)
Query: 84 LTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICEKI----TTMSFSGGSHIM 139
L G + C +GGTC + + C C G GK CEK T +S G +
Sbjct: 4164 LEGTCARNPCQHGGTCVDFWSWQ-----QCQCMEGLTGKYCEKSVTPDTALSLEGKGRLD 4218
Query: 140 LNTTREE 146
+ ++ E
Sbjct: 4219 YHMSQSE 4225
>sp|P55066|NCAN_MOUSE Neurocan core protein OS=Mus musculus GN=Ncan PE=2 SV=1
Length = 1268
Score = 60.5 bits (145), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 49 PCAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDET 107
PC +PC HG +C Y C C Y G+NC +++ C+ C NGGTC +DE
Sbjct: 963 PCENNPCLHGGTCHTNGTVYGCSCDQGYAGENCEIDIDDCLC-SPCENGGTC----IDEV 1017
Query: 108 QHRFNCTCPSGYHGKICEKIT 128
+ F C C Y G +CEK T
Sbjct: 1018 -NGFICLCLPSYGGSLCEKDT 1037
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGC 87
C SPC++G +C+D+ G+ C C P+YGG C + GC
Sbjct: 1002 CLCSPCENGGTCIDEVNGFICLCLPSYGGSLCEKDTEGC 1040
>sp|P55067|NCAN_RAT Neurocan core protein OS=Rattus norvegicus GN=Ncan PE=1 SV=1
Length = 1257
Score = 60.5 bits (145), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 49 PCAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDET 107
PC +PC HG +C Y C C Y G+NC +++ C+ C NGGTC +DE
Sbjct: 952 PCENNPCLHGGTCRTNGTMYGCSCDQGYAGENCEIDIDDCLC-SPCENGGTC----IDEV 1006
Query: 108 QHRFNCTCPSGYHGKICEKIT 128
+ F C C Y G +CEK T
Sbjct: 1007 -NGFICLCLPSYGGNLCEKDT 1026
Score = 43.9 bits (102), Expect = 4e-04, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGC 87
C SPC++G +C+D+ G+ C C P+YGG C + GC
Sbjct: 991 CLCSPCENGGTCIDEVNGFICLCLPSYGGNLCEKDTEGC 1029
>sp|Q07008|NOTC1_RAT Neurogenic locus notch homolog protein 1 OS=Rattus norvegicus
GN=Notch1 PE=2 SV=2
Length = 2531
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 50 CAYSPCKHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQH 109
CA +PC G+C+DK GY C C P Y G C+V + C G C NGGTC+ +
Sbjct: 645 CASNPCDSGTCLDKIDGYECACEPGYTGSMCNVNIDECAG-SPCHNGGTCEDGIAG---- 699
Query: 110 RFNCTCPSGYHGKIC 124
F C CP GYH C
Sbjct: 700 -FTCRCPEGYHDPTC 713
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 50 CAYSPC-KHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA +PC G+C+D AGY C+CP Y G C V L C C N G CK E
Sbjct: 795 CASNPCLNQGTCIDDVAGYKCNCPLPYTGATCEVVLAPCAT-SPCKNSGVCK---ESEDY 850
Query: 109 HRFNCTCPSGYHGKICE 125
F+C CP+G+ G+ CE
Sbjct: 851 ESFSCVCPTGWQGQTCE 867
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 50 CAYSPCKHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQH 109
C +PC HG+C D GY CDC P + G NC + C + C+NGGTCK +
Sbjct: 720 CNSNPCIHGACRDGLNGYKCDCAPGWSGTNCDINNNECES-NPCVNGGTCK-----DMTS 773
Query: 110 RFNCTCPSGYHGKICE 125
+ CTC G+ G C+
Sbjct: 774 GYVCTCREGFSGPNCQ 789
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Query: 55 CKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNC 113
C+HG CVD+ ++C C Y G C E+ C P+ C NG TC YL F+C
Sbjct: 1116 CQHGGLCVDEEDKHYCHCQAGYTGSYCEDEVDEC-SPNPCQNGATCTDYL-----GGFSC 1169
Query: 114 TCPSGYHGKICEKITTMSFS-----GGSHIMLNTT 143
C +GYHG C + S GG+ I L T
Sbjct: 1170 KCVAGYHGSNCSEEINECLSQPCQNGGTCIDLTNT 1204
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 43/77 (55%), Gaps = 7/77 (9%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C+ +PC++G+ C D G+ C C Y G NCS E+ C+ C NGGTC +D T
Sbjct: 1149 CSPNPCQNGATCTDYLGGFSCKCVAGYHGSNCSEEINECLS-QPCQNGGTC----IDLT- 1202
Query: 109 HRFNCTCPSGYHGKICE 125
+ + C+CP G G CE
Sbjct: 1203 NTYKCSCPRGTQGVHCE 1219
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C SPC+HG SC + Y C C Y G+NC ++ C P+ C NGG+C D
Sbjct: 873 CVKSPCRHGASCQNTNGSYRCLCQAGYTGRNCESDIDDCR-PNPCHNGGSC----TDGVN 927
Query: 109 HRFNCTCPSGYHGKICEK 126
F C C G+ G CE+
Sbjct: 928 AAF-CDCLPGFQGAFCEE 944
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 11/90 (12%)
Query: 39 LIIRPLYSLCPCAYSPCKHGSCVD--KRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNG 96
L + PL + C +PC++G D Y C CPP + GK+C P C NG
Sbjct: 97 LCLTPLANAC--LANPCRNGGTCDLLTLTEYKCRCPPGWSGKSCQQADPCASNP--CANG 152
Query: 97 GTCKPYLVDETQHRFNCTCPSGYHGKICEK 126
G C P+ + + C CP G+HG C +
Sbjct: 153 GQCLPF-----ESSYICGCPPGFHGPTCRQ 177
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 12/93 (12%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C +PC +G SC D FCDC P + G C ++ C + C NG C +
Sbjct: 911 CRPNPCHNGGSCTDGVNAAFCDCLPGFQGAFCEEDINECAT-NPCQNGANCT-----DCV 964
Query: 109 HRFNCTCPSGYHGKICEKIT-----TMSFSGGS 136
+ CTCP+G++G CE T + F+GG+
Sbjct: 965 DSYTCTCPTGFNGIHCENNTPDCTESSCFNGGT 997
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C +PC +G +C D +GY C C + G NC + C + CLN GTC +D+
Sbjct: 757 CESNPCVNGGTCKDMTSGYVCTCREGFSGPNCQTNINECAS-NPCLNQGTC----IDDVA 811
Query: 109 HRFNCTCPSGYHGKICEKI 127
+ C CP Y G CE +
Sbjct: 812 -GYKCNCPLPYTGATCEVV 829
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGC-VGPDTCLNGGTCKPYLVDET 107
C + CK+G +CVD Y C CPP + G+ C+ ++ C + P+ C N GTC +
Sbjct: 261 CPGNNCKNGGACVDGVNTYNCRCPPEWTGQYCTEDVDECQLMPNACQNAGTCH-----NS 315
Query: 108 QHRFNCTCPSGYHGKIC 124
+NC C +G+ G+ C
Sbjct: 316 HGGYNCVCVNGWTGEDC 332
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 47 LCPCAYSPCKH-GSCVDKR--AGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYL 103
L PCA SPCK+ G C + + C CP + G+ C +++ CV C +G +C+
Sbjct: 830 LAPCATSPCKNSGVCKESEDYESFSCVCPTGWQGQTCEIDINECVK-SPCRHGASCQ--- 885
Query: 104 VDETQHRFNCTCPSGYHGKICEK 126
T + C C +GY G+ CE
Sbjct: 886 --NTNGSYRCLCQAGYTGRNCES 906
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Query: 58 GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPS 117
G+CVD + C CPP + G C ++ C CL+GGTC+ ++ + CTCP
Sbjct: 996 GTCVDGINSFTCLCPPGFTGSYCQYDVNECDS-RPCLHGGTCQ-----DSYGTYKCTCPQ 1049
Query: 118 GYHGKICEKI 127
GY G C+ +
Sbjct: 1050 GYTGLNCQNL 1059
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 38/88 (43%), Gaps = 17/88 (19%)
Query: 49 PCAYSPCK---------HGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTC 99
PC +PCK HG VD Y C CP + G C L + C NGGTC
Sbjct: 62 PCLSTPCKNAGTCYVVDHGGIVD----YACSCPLGFSGPLCLTPLANACLANPCRNGGTC 117
Query: 100 KPYLVDETQHRFNCTCPSGYHGKICEKI 127
+ E + C CP G+ GK C++
Sbjct: 118 DLLTLTE----YKCRCPPGWSGKSCQQA 141
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 50 CAYSPCKH-GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA SPC H G CVDK + C CP + G C ++ C C NG C +
Sbjct: 494 CASSPCLHNGRCVDKINEFLCQCPKGFSGHLCQYDVDECAS-TPCKNGAKCL-----DGP 547
Query: 109 HRFNCTCPSGYHGKICE 125
+ + C C GY G CE
Sbjct: 548 NTYTCVCTEGYTGTHCE 564
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Query: 50 CAYSP--CKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDE 106
C+ +P C+HG +C ++ Y C C T+ G +C + C P C NGGTC+P +
Sbjct: 182 CSQNPGLCRHGGTCHNEIGSYRCACRATHTGPHCELPYVPC-SPSPCQNGGTCRP--TGD 238
Query: 107 TQHRFNCTCPSGYHGKICEK 126
T H C C G+ G+ CE+
Sbjct: 239 TTHE--CACLPGFAGQNCEE 256
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 10/75 (13%)
Query: 56 KHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHR---FN 112
+G+CVD+ GY C CPP + G+ C ++ C+ C P R F+
Sbjct: 1240 NNGTCVDQVGGYTCTCPPGFVGERCEGDVNECL-------SNPCDPRGTQNCVQRVNDFH 1292
Query: 113 CTCPSGYHGKICEKI 127
C C +G+ G+ CE +
Sbjct: 1293 CECRAGHTGRRCESV 1307
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 7/79 (8%)
Query: 49 PCAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCV-GPDTCLNGGTCKPYLVDE 106
PCA +PC +G C+ + Y C CPP + G C ++ C P C +GGTC +
Sbjct: 143 PCASNPCANGGQCLPFESSYICGCPPGFHGPTCRQDVNECSQNPGLCRHGGTCHNEI--- 199
Query: 107 TQHRFNCTCPSGYHGKICE 125
+ C C + + G CE
Sbjct: 200 --GSYRCACRATHTGPHCE 216
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 49 PCAYSPCKHGSCVDKRAG--YFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDE 106
PC+ SPC++G + C C P + G+NC + C G + C NGG C VD
Sbjct: 221 PCSPSPCQNGGTCRPTGDTTHECACLPGFAGQNCEENVDDCPG-NNCKNGGAC----VDG 275
Query: 107 TQHRFNCTCPSGYHGKICEK 126
+ +NC CP + G+ C +
Sbjct: 276 V-NTYNCRCPPEWTGQYCTE 294
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 45 YSLCPCAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYL 103
Y + C PC HG +C D Y C CP Y G NC + C C NGG C
Sbjct: 1020 YDVNECDSRPCLHGGTCQDSYGTYKCTCPQGYTGLNCQNLVRWCDSA-PCKNGGKCW--- 1075
Query: 104 VDETQHRFNCTCPSGYHGKICEKIT 128
+T +++C C SG+ G C+ ++
Sbjct: 1076 --QTNTQYHCECRSGWTGFNCDVLS 1098
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 13/84 (15%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGP-------DTCLNGGTCKP 101
C PC++G +C+D Y C CP G +C + + C P C N GTC
Sbjct: 1187 CLSQPCQNGGTCIDLTNTYKCSCPRGTQGVHCEINVDDCHPPLDPASRSPKCFNNGTC-- 1244
Query: 102 YLVDETQHRFNCTCPSGYHGKICE 125
VD+ + CTCP G+ G+ CE
Sbjct: 1245 --VDQV-GGYTCTCPPGFVGERCE 1265
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Query: 59 SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSG 118
+CV + + C+C + G+ C + GC G C NGG C + T F C CP+
Sbjct: 1283 NCVQRVNDFHCECRAGHTGRRCESVINGCRG-KPCRNGGVCA--VASNTARGFICRCPAR 1339
Query: 119 YHGKICEK 126
+ G CE
Sbjct: 1340 FEGATCEN 1347
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Query: 45 YSLCPCAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYL 103
Y + CA +PCK+G+ C+D Y C C Y G +C V++ C PD C G L
Sbjct: 527 YDVDECASTPCKNGAKCLDGPNTYTCVCTEGYTGTHCEVDIDEC-DPDPCHIG------L 579
Query: 104 VDETQHRFNCTCPSGYHGKICE 125
+ F C C GY G CE
Sbjct: 580 CKDGVATFTCLCQPGYTGHHCE 601
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 7/79 (8%)
Query: 48 CPCAYSPCKH-GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDE 106
C +PC+H G C++ + C C Y G C +++ C+ + C N TC + +
Sbjct: 416 CALGANPCEHAGKCLNTLGSFECQCLQGYTGPRCEIDVNECIS-NPCQNDATCLDQIGE- 473
Query: 107 TQHRFNCTCPSGYHGKICE 125
F C C GY G CE
Sbjct: 474 ----FQCICMPGYEGVYCE 488
Score = 37.7 bits (86), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 50 CAYSPCKH-GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C +PC++ +C+D+ + C C P Y G C + C CL+ G C VD+
Sbjct: 456 CISNPCQNDATCLDQIGEFQCICMPGYEGVYCEINTDECAS-SPCLHNGRC----VDKI- 509
Query: 109 HRFNCTCPSGYHGKICE 125
+ F C CP G+ G +C+
Sbjct: 510 NEFLCQCPKGFSGHLCQ 526
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Query: 58 GSCVDKRAGYFCDCPPTYGGKNCSVELTG-CVGPDTCLNGGTCKPYLVDETQHRFNCTCP 116
G+C+ C C ++ G C + CVG + C N GTC+P + C CP
Sbjct: 1361 GTCISGPRSPTCLCLGSFTGPECQFPASSPCVGSNPCYNQGTCEPT---SESPFYRCLCP 1417
Query: 117 SGYHGKICEKITTMSFSGGS 136
+ ++G +C I SF+G +
Sbjct: 1418 AKFNGLLCH-ILDYSFTGAA 1436
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA SPC +G +C D AG+ C CP Y C E+ C + C++G C+ L
Sbjct: 682 CAGSPCHNGGTCEDGIAGFTCRCPEGYHDPTCLSEVNEC-NSNPCIHGA-CRDGL----- 734
Query: 109 HRFNCTCPSGYHGKICE 125
+ + C C G+ G C+
Sbjct: 735 NGYKCDCAPGWSGTNCD 751
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 33/80 (41%), Gaps = 9/80 (11%)
Query: 50 CAYSPCKHGSCVDKR---AGYFCDCPPTYGGKNCSVELTGC-VGPDTCLNGGTCKPYLVD 105
C +PC GS D C CP Y G CS ++ C +G + C + G C
Sbjct: 376 CISNPCNEGSNCDTNPVNGKAICTCPRGYTGPACSQDVDECALGANPCEHAGKCL----- 430
Query: 106 ETQHRFNCTCPSGYHGKICE 125
T F C C GY G CE
Sbjct: 431 NTLGSFECQCLQGYTGPRCE 450
Score = 34.3 bits (77), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 33/76 (43%), Gaps = 6/76 (7%)
Query: 50 CAYSPCKHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQH 109
C PC G C D A + C C P Y G +C + C C +GGTC+ + +
Sbjct: 570 CDPDPCHIGLCKDGVATFTCLCQPGYTGHHCETNINECHS-QPCRHGGTCQ-----DRDN 623
Query: 110 RFNCTCPSGYHGKICE 125
+ C C G G CE
Sbjct: 624 YYLCLCLKGTTGPNCE 639
Score = 33.9 bits (76), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 8/76 (10%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C PC+HG +C D+ Y C C G NC + L C + C + GTC +
Sbjct: 607 CHSQPCRHGGTCQDRDNYYLCLCLKGTTGPNCEINLDDCAS-NPC-DSGTCLDKI----- 659
Query: 109 HRFNCTCPSGYHGKIC 124
+ C C GY G +C
Sbjct: 660 DGYECACEPGYTGSMC 675
Score = 33.9 bits (76), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 37/86 (43%), Gaps = 15/86 (17%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCV------GPDT---CLNGGTC 99
C +PCK+G C Y C+C + G NC V C G D C +GG C
Sbjct: 1063 CDSAPCKNGGKCWQTNTQYHCECRSGWTGFNCDVLSVSCEVAAQKRGIDVTLLCQHGGLC 1122
Query: 100 KPYLVDETQHRFNCTCPSGYHGKICE 125
VDE + C C +GY G CE
Sbjct: 1123 ----VDEEDKHY-CHCQAGYTGSYCE 1143
Score = 33.1 bits (74), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 6/67 (8%)
Query: 58 GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPS 117
G+C + GY C C + G++CS + C C G TC + F C CP
Sbjct: 310 GTCHNSHGGYNCVCVNGWTGEDCSDNIDDCASA-ACFQGATCHDRVA-----SFYCECPH 363
Query: 118 GYHGKIC 124
G G +C
Sbjct: 364 GRTGLLC 370
Score = 32.7 bits (73), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA + C G+ C D+ A ++C+CP G C + C+ + C G C +
Sbjct: 339 CASAACFQGATCHDRVASFYCECPHGRTGLLCHLN-DACIS-NPCNEGSNCD---TNPVN 393
Query: 109 HRFNCTCPSGYHGKICEK 126
+ CTCP GY G C +
Sbjct: 394 GKAICTCPRGYTGPACSQ 411
Score = 30.4 bits (67), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
Query: 50 CAYSPCKHGS----CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTC 99
C PC++G + G+ C CP + G C + C G CLNGGTC
Sbjct: 1311 CRGKPCRNGGVCAVASNTARGFICRCPARFEGATCENDARTC-GSLRCLNGGTC 1363
>sp|Q6V0I7|FAT4_HUMAN Protocadherin Fat 4 OS=Homo sapiens GN=FAT4 PE=1 SV=2
Length = 4981
Score = 60.1 bits (144), Expect = 6e-09, Method: Composition-based stats.
Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 12/93 (12%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C SPC G +C + G+ C CP + G+ C ++ C+ C NG C+ +
Sbjct: 3866 CLPSPCHSGGTCHNLVGGFSCSCPDGFTGRACERDINECL-QSPCKNGAICQNF-----P 3919
Query: 109 HRFNCTCPSGYHGKICEKITTM-----SFSGGS 136
FNC C +GY GK+CE F+GGS
Sbjct: 3920 GSFNCVCKTGYTGKMCESSVNYCECNPCFNGGS 3952
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 29/100 (29%)
Query: 50 CAYSPCKHG-SCVDKRA----------------------GYFCDCPPTYGGKNCSVELTG 86
C + PC++G SC+ + A + C C P Y G C +++
Sbjct: 3806 CVHGPCQNGGSCLRRLAVSSVLKSRESLPVIIVANEPLQPFLCKCLPGYAGSWCEIDIDE 3865
Query: 87 CVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICEK 126
C+ P C +GGTC + F+C+CP G+ G+ CE+
Sbjct: 3866 CL-PSPCHSGGTCHNLV-----GGFSCSCPDGFTGRACER 3899
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/77 (38%), Positives = 37/77 (48%), Gaps = 7/77 (9%)
Query: 50 CAYSPCKHGSCVDKRAGYF-CDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C SPCK+G+ G F C C Y GK C + C + C NGG+C+ VD
Sbjct: 3904 CLQSPCKNGAICQNFPGSFNCVCKTGYTGKMCESSVNYCEC-NPCFNGGSCQSG-VDS-- 3959
Query: 109 HRFNCTCPSGYHGKICE 125
+ C CP G GK CE
Sbjct: 3960 --YYCHCPFGVFGKHCE 3974
Score = 41.2 bits (95), Expect = 0.003, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 18/79 (22%)
Query: 50 CAYSPC-KHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA +PC C+++ Y C PP G C NGG+C+P L
Sbjct: 4404 CASNPCWGDLLCINQWYAYRC-VPP------------GDCASHPCQNGGSCEPGL----H 4446
Query: 109 HRFNCTCPSGYHGKICEKI 127
F C+CP + G+ CE +
Sbjct: 4447 SGFTCSCPDSHTGRTCEMV 4465
Score = 40.4 bits (93), Expect = 0.005, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 18/103 (17%)
Query: 7 GGIRTLDLLHGKQFSIGTNSVLNVIM--------LKSDYRLIIRPLYSLCP-----CAYS 53
GGIR+L+ + ++ + ++ + IM L+ L + + CP C S
Sbjct: 4110 GGIRSLEPILQRRGHVESHDFVGCIMEFAVNGRPLEPSQALAAQGILDQCPRLEGACTRS 4169
Query: 54 PCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLN 95
PC+HG +C+D + C C GK C +T PDT L+
Sbjct: 4170 PCQHGGTCMDYWSWQQCHCKEGLTGKYCEKSVT----PDTALS 4208
Score = 31.6 bits (70), Expect = 2.2, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 27/70 (38%), Gaps = 13/70 (18%)
Query: 84 LTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICEKI----TTMSFSGGS--- 136
L G C +GGTC Y + C C G GK CEK T +S G
Sbjct: 4162 LEGACTRSPCQHGGTCMDYWSWQ-----QCHCKEGLTGKYCEKSVTPDTALSLEGKGRLD 4216
Query: 137 -HIMLNTTRE 145
H+ N RE
Sbjct: 4217 YHMSQNEKRE 4226
Score = 30.8 bits (68), Expect = 3.7, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 50 CAYSPC-KHGSCVDKRAGYFCDCPPTYGGKNCSVELTG 86
C +PC GSC Y+C CP GK+C + G
Sbjct: 3942 CECNPCFNGGSCQSGVDSYYCHCPFGVFGKHCELNSYG 3979
>sp|Q01705|NOTC1_MOUSE Neurogenic locus notch homolog protein 1 OS=Mus musculus GN=Notch1
PE=1 SV=3
Length = 2531
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Query: 50 CAYSPCKHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQH 109
CA +PC G+C+DK GY C C P Y G C+V + C G C NGGTC+ +
Sbjct: 645 CASNPCDSGTCLDKIDGYECACEPGYTGSMCNVNIDECAG-SPCHNGGTCEDGIAG---- 699
Query: 110 RFNCTCPSGYHGKIC 124
F C CP GYH C
Sbjct: 700 -FTCRCPEGYHDPTC 713
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 50 CAYSPC-KHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA +PC G+C+D AGY C+CP Y G C V L C C N G CK E
Sbjct: 795 CASNPCLNQGTCIDDVAGYKCNCPLPYTGATCEVVLAPCAT-SPCKNSGVCK---ESEDY 850
Query: 109 HRFNCTCPSGYHGKICE 125
F+C CP+G+ G+ CE
Sbjct: 851 ESFSCVCPTGWQGQTCE 867
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 50 CAYSPCKHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQH 109
C +PC HG+C D GY CDC P + G NC + C + C+NGGTCK +
Sbjct: 720 CNSNPCIHGACRDGLNGYKCDCAPGWSGTNCDINNNECES-NPCVNGGTCK-----DMTS 773
Query: 110 RFNCTCPSGYHGKICE 125
+ CTC G+ G C+
Sbjct: 774 GYVCTCREGFSGPNCQ 789
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 43/77 (55%), Gaps = 7/77 (9%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C+ +PC++G+ C D G+ C C Y G NCS E+ C+ C NGGTC +D T
Sbjct: 1149 CSPNPCQNGATCTDYLGGFSCKCVAGYHGSNCSEEINECLS-QPCQNGGTC----IDLT- 1202
Query: 109 HRFNCTCPSGYHGKICE 125
+ + C+CP G G CE
Sbjct: 1203 NSYKCSCPRGTQGVHCE 1219
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 7/79 (8%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGC-VGPDTCLNGGTCKPYLVDET 107
C + CK+G +CVD Y C CPP + G+ C+ ++ C + P+ C NGGTC T
Sbjct: 261 CPGNNCKNGGACVDGVNTYNCRCPPEWTGQYCTEDVDECQLMPNACQNGGTCH-----NT 315
Query: 108 QHRFNCTCPSGYHGKICEK 126
+NC C +G+ G+ C +
Sbjct: 316 HGGYNCVCVNGWTGEDCSE 334
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Query: 55 CKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNC 113
C+HG CVD+ ++C C Y G C E+ C P+ C NG TC YL F+C
Sbjct: 1116 CQHGGLCVDEGDKHYCHCQAGYTGSYCEDEVDEC-SPNPCQNGATCTDYL-----GGFSC 1169
Query: 114 TCPSGYHGKICEK 126
C +GYHG C +
Sbjct: 1170 KCVAGYHGSNCSE 1182
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C SPC+HG SC + Y C C Y G+NC ++ C P+ C NGG+C D
Sbjct: 873 CVKSPCRHGASCQNTNGSYRCLCQAGYTGRNCESDIDDCR-PNPCHNGGSC----TDGIN 927
Query: 109 HRFNCTCPSGYHGKICEK 126
F C C G+ G CE+
Sbjct: 928 TAF-CDCLPGFQGAFCEE 944
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 11/90 (12%)
Query: 39 LIIRPLYSLCPCAYSPCKHGSCVD--KRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNG 96
L + PL + C +PC++G D Y C CPP + GK+C P C NG
Sbjct: 97 LCLTPLDNAC--LANPCRNGGTCDLLTLTEYKCRCPPGWSGKSCQQADPCASNP--CANG 152
Query: 97 GTCKPYLVDETQHRFNCTCPSGYHGKICEK 126
G C P+ + + C CP G+HG C +
Sbjct: 153 GQCLPF-----ESSYICRCPPGFHGPTCRQ 177
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C +PC +G +C D +GY C C + G NC + C + CLN GTC +D+
Sbjct: 757 CESNPCVNGGTCKDMTSGYVCTCREGFSGPNCQTNINECAS-NPCLNQGTC----IDDVA 811
Query: 109 HRFNCTCPSGYHGKICEKI 127
+ C CP Y G CE +
Sbjct: 812 -GYKCNCPLPYTGATCEVV 829
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 47 LCPCAYSPCKH-GSCVDKR--AGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYL 103
L PCA SPCK+ G C + + C CP + G+ C V++ CV C +G +C+
Sbjct: 830 LAPCATSPCKNSGVCKESEDYESFSCVCPTGWQGQTCEVDINECVK-SPCRHGASCQ--- 885
Query: 104 VDETQHRFNCTCPSGYHGKICEK 126
T + C C +GY G+ CE
Sbjct: 886 --NTNGSYRCLCQAGYTGRNCES 906
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Query: 58 GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPS 117
G+CVD + C CPP + G C ++ C CL+GGTC+ ++ + CTCP
Sbjct: 996 GTCVDGINSFTCLCPPGFTGSYCQYDVNECDS-RPCLHGGTCQ-----DSYGTYKCTCPQ 1049
Query: 118 GYHGKICEKI 127
GY G C+ +
Sbjct: 1050 GYTGLNCQNL 1059
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 12/93 (12%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C +PC +G SC D FCDC P + G C ++ C + C NG C +
Sbjct: 911 CRPNPCHNGGSCTDGINTAFCDCLPGFQGAFCEEDINECAS-NPCQNGANCT-----DCV 964
Query: 109 HRFNCTCPSGYHGKICEKIT-----TMSFSGGS 136
+ CTCP G++G CE T + F+GG+
Sbjct: 965 DSYTCTCPVGFNGIHCENNTPDCTESSCFNGGT 997
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 59 SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSG 118
+CV + + C+C + G+ C + GC G C NGG C + T F C CP+G
Sbjct: 1283 NCVQRVNDFHCECRAGHTGRRCESVINGCRG-KPCKNGGVCA--VASNTARGFICRCPAG 1339
Query: 119 YHGKICEK 126
+ G CE
Sbjct: 1340 FEGATCEN 1347
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 38/88 (43%), Gaps = 17/88 (19%)
Query: 49 PCAYSPCK---------HGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTC 99
PC +PCK HG VD Y C CP + G C L + C NGGTC
Sbjct: 62 PCLSTPCKNAGTCHVVDHGGTVD----YACSCPLGFSGPLCLTPLDNACLANPCRNGGTC 117
Query: 100 KPYLVDETQHRFNCTCPSGYHGKICEKI 127
+ E + C CP G+ GK C++
Sbjct: 118 DLLTLTE----YKCRCPPGWSGKSCQQA 141
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Query: 50 CAYSP--CKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDE 106
C+ +P C+HG +C ++ Y C C T+ G +C + C P C NGGTC+P +
Sbjct: 182 CSQNPGLCRHGGTCHNEIGSYRCACRATHTGPHCELPYVPC-SPSPCQNGGTCRP--TGD 238
Query: 107 TQHRFNCTCPSGYHGKICEK 126
T H C C G+ G+ CE+
Sbjct: 239 TTHE--CACLPGFAGQNCEE 256
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 10/75 (13%)
Query: 56 KHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHR---FN 112
+G+CVD+ GY C CPP + G+ C ++ C+ C P R F+
Sbjct: 1240 NNGTCVDQVGGYTCTCPPGFVGERCEGDVNECL-------SNPCDPRGTQNCVQRVNDFH 1292
Query: 113 CTCPSGYHGKICEKI 127
C C +G+ G+ CE +
Sbjct: 1293 CECRAGHTGRRCESV 1307
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 7/79 (8%)
Query: 49 PCAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCV-GPDTCLNGGTCKPYLVDE 106
PCA +PC +G C+ + Y C CPP + G C ++ C P C +GGTC +
Sbjct: 143 PCASNPCANGGQCLPFESSYICRCPPGFHGPTCRQDVNECSQNPGLCRHGGTCHNEI--- 199
Query: 107 TQHRFNCTCPSGYHGKICE 125
+ C C + + G CE
Sbjct: 200 --GSYRCACRATHTGPHCE 216
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 13/84 (15%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGP-------DTCLNGGTCKP 101
C PC++G +C+D Y C CP G +C + + C P C N GTC
Sbjct: 1187 CLSQPCQNGGTCIDLTNSYKCSCPRGTQGVHCEINVDDCHPPLDPASRSPKCFNNGTC-- 1244
Query: 102 YLVDETQHRFNCTCPSGYHGKICE 125
VD+ + CTCP G+ G+ CE
Sbjct: 1245 --VDQVG-GYTCTCPPGFVGERCE 1265
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
Query: 45 YSLCPCAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYL 103
Y + C PC HG +C D Y C CP Y G NC + C C NGG C
Sbjct: 1020 YDVNECDSRPCLHGGTCQDSYGTYKCTCPQGYTGLNCQNLVRWCDSA-PCKNGGRCW--- 1075
Query: 104 VDETQHRFNCTCPSGYHGKICEKIT 128
+T +++C C SG+ G C+ ++
Sbjct: 1076 --QTNTQYHCECRSGWTGVNCDVLS 1098
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 49 PCAYSPCKHGSCVDKRAG--YFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDE 106
PC+ SPC++G + C C P + G+NC + C G + C NGG C VD
Sbjct: 221 PCSPSPCQNGGTCRPTGDTTHECACLPGFAGQNCEENVDDCPG-NNCKNGGAC----VDG 275
Query: 107 TQHRFNCTCPSGYHGKICEK 126
+ +NC CP + G+ C +
Sbjct: 276 V-NTYNCRCPPEWTGQYCTE 294
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Query: 45 YSLCPCAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYL 103
Y + CA +PCK+G+ C+D Y C C Y G +C V++ C PD C + G+CK +
Sbjct: 527 YDVDECASTPCKNGAKCLDGPNTYTCVCTEGYTGTHCEVDIDEC-DPDPC-HYGSCKDGV 584
Query: 104 VDETQHRFNCTCPSGYHGKICE 125
F C C GY G CE
Sbjct: 585 A-----TFTCLCQPGYTGHHCE 601
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 50 CAYSPCKH-GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA SPC H G C+DK + C CP + G C ++ C C NG C +
Sbjct: 494 CASSPCLHNGHCMDKINEFQCQCPKGFNGHLCQYDVDECAS-TPCKNGAKCL-----DGP 547
Query: 109 HRFNCTCPSGYHGKICE 125
+ + C C GY G CE
Sbjct: 548 NTYTCVCTEGYTGTHCE 564
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Query: 50 CAYSPCKHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQH 109
C PC +GSC D A + C C P Y G +C + C C +GGTC+ + +
Sbjct: 570 CDPDPCHYGSCKDGVATFTCLCQPGYTGHHCETNINECHS-QPCRHGGTCQ-----DRDN 623
Query: 110 RFNCTCPSGYHGKICE 125
+ C C G G CE
Sbjct: 624 SYLCLCLKGTTGPNCE 639
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 50 CAYSPCKH-GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C +PC++ +C+D+ + C C P Y G C + C CL+ G C +
Sbjct: 456 CISNPCQNDATCLDQIGEFQCICMPGYEGVYCEINTDECAS-SPCLHNGHCMDKI----- 509
Query: 109 HRFNCTCPSGYHGKICE 125
+ F C CP G++G +C+
Sbjct: 510 NEFQCQCPKGFNGHLCQ 526
Score = 37.7 bits (86), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 7/79 (8%)
Query: 48 CPCAYSPCKH-GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDE 106
C +PC+H G C++ + C C Y G C +++ C+ + C N TC + +
Sbjct: 416 CALGANPCEHAGKCLNTLGSFECQCLQGYTGPRCEIDVNECIS-NPCQNDATCLDQIGE- 473
Query: 107 TQHRFNCTCPSGYHGKICE 125
F C C GY G CE
Sbjct: 474 ----FQCICMPGYEGVYCE 488
Score = 36.6 bits (83), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 58 GSCVDKRAGYFCDCPPTYGGKNCSVELTG-CVGPDTCLNGGTCKPYLVDETQHRFNCTCP 116
G+C+ C C ++ G C + CVG + C N GTC+P + + C CP
Sbjct: 1361 GTCISGPRSPTCLCLGSFTGPECQFPASSPCVGSNPCYNQGTCEPTSENPF---YRCLCP 1417
Query: 117 SGYHGKICEKITTMSFSGGS 136
+ ++G +C I SF+GG+
Sbjct: 1418 AKFNGLLCH-ILDYSFTGGA 1436
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 8/76 (10%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C PC+HG +C D+ Y C C G NC + L C + C + GTC +
Sbjct: 607 CHSQPCRHGGTCQDRDNSYLCLCLKGTTGPNCEINLDDCAS-NPC-DSGTCLDKI----- 659
Query: 109 HRFNCTCPSGYHGKIC 124
+ C C GY G +C
Sbjct: 660 DGYECACEPGYTGSMC 675
Score = 34.7 bits (78), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 33/80 (41%), Gaps = 9/80 (11%)
Query: 50 CAYSPCKHGSCVDKR---AGYFCDCPPTYGGKNCSVELTGC-VGPDTCLNGGTCKPYLVD 105
C +PC GS D C CP Y G CS ++ C +G + C + G C
Sbjct: 376 CISNPCNEGSNCDTNPVNGKAICTCPSGYTGPACSQDVDECALGANPCEHAGKCL----- 430
Query: 106 ETQHRFNCTCPSGYHGKICE 125
T F C C GY G CE
Sbjct: 431 NTLGSFECQCLQGYTGPRCE 450
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA SPC +G +C D AG+ C CP Y C E+ C + C++ G C+ L
Sbjct: 682 CAGSPCHNGGTCEDGIAGFTCRCPEGYHDPTCLSEVNEC-NSNPCIH-GACRDGL----- 734
Query: 109 HRFNCTCPSGYHGKICE 125
+ + C C G+ G C+
Sbjct: 735 NGYKCDCAPGWSGTNCD 751
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA + C G+ C D+ A ++C+CP G C + C+ + C G C +
Sbjct: 339 CASAACFQGATCHDRVASFYCECPHGRTGLLCHLN-DACIS-NPCNEGSNCD---TNPVN 393
Query: 109 HRFNCTCPSGYHGKICEK 126
+ CTCPSGY G C +
Sbjct: 394 GKAICTCPSGYTGPACSQ 411
Score = 33.5 bits (75), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 37/86 (43%), Gaps = 15/86 (17%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCV------GPDT---CLNGGTC 99
C +PCK+G C Y C+C + G NC V C G D C +GG C
Sbjct: 1063 CDSAPCKNGGRCWQTNTQYHCECRSGWTGVNCDVLSVSCEVAAQKRGIDVTLLCQHGGLC 1122
Query: 100 KPYLVDETQHRFNCTCPSGYHGKICE 125
VDE + C C +GY G CE
Sbjct: 1123 ----VDEGDKHY-CHCQAGYTGSYCE 1143
Score = 33.1 bits (74), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 6/67 (8%)
Query: 58 GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPS 117
G+C + GY C C + G++CS + C C G TC + F C CP
Sbjct: 310 GTCHNTHGGYNCVCVNGWTGEDCSENIDDCASA-ACFQGATCHDRVA-----SFYCECPH 363
Query: 118 GYHGKIC 124
G G +C
Sbjct: 364 GRTGLLC 370
Score = 30.8 bits (68), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
Query: 50 CAYSPCKHGS----CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTC 99
C PCK+G + G+ C CP + G C + C G CLNGGTC
Sbjct: 1311 CRGKPCKNGGVCAVASNTARGFICRCPAGFEGATCENDARTC-GSLRCLNGGTC 1363
>sp|Q9ULI3|HEG1_HUMAN Protein HEG homolog 1 OS=Homo sapiens GN=HEG1 PE=1 SV=3
Length = 1381
Score = 59.3 bits (142), Expect = 8e-09, Method: Composition-based stats.
Identities = 39/111 (35%), Positives = 55/111 (49%), Gaps = 12/111 (10%)
Query: 46 SLCPCAYSPCKH-GSCV--DKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPY 102
S+ CA +PC H G CV + GY C CPP++ G +CSV++ C+ + C + C
Sbjct: 985 SVNSCAVNPCLHNGECVADNTSRGYHCRCPPSWQGDDCSVDVNECLS-NPCPSTAMC--- 1040
Query: 103 LVDETQHRFNCTCPSGYHGK--ICEKITTMSFSGG-SHIMLNTTREEGYDI 150
+ TQ F C CP GY + IC + T LNTT E+ D+
Sbjct: 1041 --NNTQGSFICKCPVGYQLEKGICNLVRTFVTEFKLKRTFLNTTVEKHSDL 1089
>sp|P21783|NOTCH_XENLA Neurogenic locus notch protein homolog OS=Xenopus laevis GN=notch1
PE=1 SV=3
Length = 2524
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 50 CAYSPCKHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQH 109
CA + C +G C+DK GY C C P Y GK C++ + C + C NGGTCK + +
Sbjct: 644 CASNLCDNGKCIDKIDGYECTCEPGYTGKLCNININECDS-NPCRNGGTCKDQI-----N 697
Query: 110 RFNCTCPSGYHGKIC 124
F C CP GYH +C
Sbjct: 698 GFTCVCPDGYHDHMC 712
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 50 CAYSPC-KHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C+ +PC HG+C+D AGY C+C Y G C L C G C NGG CK ET
Sbjct: 794 CSSNPCLNHGTCIDDVAGYKCNCMLPYTGAICEAVLAPCAG-SPCKNGGRCKESEDFET- 851
Query: 109 HRFNCTCPSGYHGKICE 125
F+C CP G+ G+ CE
Sbjct: 852 --FSCECPPGWQGQTCE 866
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C PC++G+ C + Y C+C P Y G+NC +++ C P+ C NGG+C +
Sbjct: 872 CVNRPCRNGATCQNTNGSYKCNCKPGYTGRNCEMDIDDCQ-PNPCHNGGSCSDGI----- 925
Query: 109 HRFNCTCPSGYHGKICEK 126
+ F C CP+G+ G CE+
Sbjct: 926 NMFFCNCPAGFRGPKCEE 943
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 50 CAYSPCKHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQH 109
C +PC HG+C D GY CDC + G NC + C + C+NGGTCK +
Sbjct: 719 CNSNPCIHGACHDGVNGYKCDCEAGWSGSNCDINNNECES-NPCMNGGTCK-----DMTG 772
Query: 110 RFNCTCPSGYHGKICE 125
+ CTC +G+ G C+
Sbjct: 773 AYICTCKAGFSGPNCQ 788
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 47 LCPCAYSPCKHG-SCVDKR--AGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYL 103
L PCA SPCK+G C + + C+CPP + G+ C +++ CV C NG TC+
Sbjct: 829 LAPCAGSPCKNGGRCKESEDFETFSCECPPGWQGQTCEIDMNECVN-RPCRNGATCQ--- 884
Query: 104 VDETQHRFNCTCPSGYHGKICE 125
T + C C GY G+ CE
Sbjct: 885 --NTNGSYKCNCKPGYTGRNCE 904
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 6/78 (7%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C+ +PCK+G C+++ Y C C + G+NC C P CLNGGTC+ D+T
Sbjct: 183 CSQNPCKNGGQCINEFGSYRCTCQNRFTGRNCDEPYVPC-NPSPCLNGGTCR--QTDDTS 239
Query: 109 HRFNCTCPSGYHGKICEK 126
++CTC G+ G+ CE+
Sbjct: 240 --YDCTCLPGFSGQNCEE 255
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C+ +PC++G+ C D GY C+C Y G NCS E+ C+ C NGGTC +
Sbjct: 1148 CSPNPCQNGATCTDYLGGYSCECVAGYHGVNCSEEINECLS-HPCQNGGTCIDLI----- 1201
Query: 109 HRFNCTCPSGYHGKICE 125
+ + C+CP G G CE
Sbjct: 1202 NTYKCSCPRGTQGVHCE 1218
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 7/79 (8%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGC-VGPDTCLNGGTCKPYLVDET 107
C + C++G +CVD Y C CPP + G+ C+ ++ C + P+ C NGGTC T
Sbjct: 260 CPSNNCRNGGTCVDGVNTYNCQCPPDWTGQYCTEDVDECQLMPNACQNGGTCH-----NT 314
Query: 108 QHRFNCTCPSGYHGKICEK 126
+NC C +G+ G+ C +
Sbjct: 315 YGGYNCVCVNGWTGEDCSE 333
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Query: 58 GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPS 117
G+C+D + C CPP + G C ++ C CLNGGTC+ ++ + CTCP
Sbjct: 995 GTCIDGINTFTCQCPPGFTGSYCQHDINECDS-KPCLNGGTCQ-----DSYGTYKCTCPQ 1048
Query: 118 GYHGKICEKI 127
GY G C+ +
Sbjct: 1049 GYTGLNCQNL 1058
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 50 CAYSPCKHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQH 109
C PC +G+C D A + C C P Y G+ C ++ C+ CLNGG C + ++
Sbjct: 569 CIPDPCHYGTCKDGIATFTCLCRPGYTGRLCDNDINECLS-KPCLNGGQCT-----DREN 622
Query: 110 RFNCTCPSGYHGKICE 125
+ CTCP G G CE
Sbjct: 623 GYICTCPKGTTGVNCE 638
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 17/105 (16%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C +PCK+G+ C+D Y C C + G++C ++ C+ PD C + GTCK +
Sbjct: 531 CTSTPCKNGAKCLDGPNSYTCQCTEGFTGRHCEQDINECI-PDPC-HYGTCKDGIA---- 584
Query: 109 HRFNCTCPSGYHGKICEK-----ITTMSFSGGSHIMLNTTREEGY 148
F C C GY G++C+ ++ +GG T RE GY
Sbjct: 585 -TFTCLCRPGYTGRLCDNDINECLSKPCLNGGQC----TDRENGY 624
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 36/80 (45%), Gaps = 9/80 (11%)
Query: 50 CAYSPCKHGSCVDKR---AGYFCDCPPTYGGKNCSVELTGC-VGPDTCLNGGTCKPYLVD 105
C +PC GS D C CPP Y G C+ ++ C +G + C +GG C
Sbjct: 375 CISNPCNEGSNCDTNPVNGKAICTCPPGYTGPACNNDVDECSLGANPCEHGGRCT----- 429
Query: 106 ETQHRFNCTCPSGYHGKICE 125
T F C CP GY G CE
Sbjct: 430 NTLGSFQCNCPQGYAGPRCE 449
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
Query: 58 GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPS 117
G CVD +FC C Y G C ++ C P+ C NG TC YL ++C C +
Sbjct: 1119 GMCVDTGNTHFCRCQAGYTGSYCEEQVDEC-SPNPCQNGATCTDYL-----GGYSCECVA 1172
Query: 118 GYHGKICEK 126
GYHG C +
Sbjct: 1173 GYHGVNCSE 1181
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 50 CAYSPCKH-GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA +PC H G C+DK + CDCP + G C + C C NG C +
Sbjct: 493 CASNPCLHNGKCIDKINEFRCDCPTGFSGNLCQHDFDECTS-TPCKNGAKCL-----DGP 546
Query: 109 HRFNCTCPSGYHGKICEK 126
+ + C C G+ G+ CE+
Sbjct: 547 NSYTCQCTEGFTGRHCEQ 564
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 49 PCAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDET 107
PCA +PC +G C+ Y C CPP + G C ++ C + C NGG C ++E
Sbjct: 144 PCASNPCANGGKCLPFEIQYICKCPPGFHGATCKQDINEC-SQNPCKNGGQC----INEF 198
Query: 108 QHRFNCTCPSGYHGKICEK 126
+ CTC + + G+ C++
Sbjct: 199 -GSYRCTCQNRFTGRNCDE 216
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 38/79 (48%), Gaps = 7/79 (8%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C +PC +G +C D Y C C + G NC + C + CLN GTC + D
Sbjct: 756 CESNPCMNGGTCKDMTGAYICTCKAGFSGPNCQTNINECSS-NPCLNHGTC---IDDVAG 811
Query: 109 HRFNCTCPSGYHGKICEKI 127
++ NC P Y G ICE +
Sbjct: 812 YKCNCMLP--YTGAICEAV 828
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 7/79 (8%)
Query: 48 CPCAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDE 106
C +PC+HG C + + C+CP Y G C +++ C+ + C N TC + +
Sbjct: 415 CSLGANPCEHGGRCTNTLGSFQCNCPQGYAGPRCEIDVNECLS-NPCQNDSTCLDQIGE- 472
Query: 107 TQHRFNCTCPSGYHGKICE 125
F C C GY G CE
Sbjct: 473 ----FQCICMPGYEGLYCE 487
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C +PC +G SC D +FC+CP + G C ++ C + C NG C +
Sbjct: 910 CQPNPCHNGGSCSDGINMFFCNCPAGFRGPKCEEDINECAS-NPCKNGANCT-----DCV 963
Query: 109 HRFNCTCPSGYHGKICEKIT-----TMSFSGGSHI 138
+ + CTC G+ G CE T + F+GG+ I
Sbjct: 964 NSYTCTCQPGFSGIHCESNTPDCTESSCFNGGTCI 998
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Query: 49 PCAYSPCKHGSCVDK--RAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDE 106
PC SPC +G + Y C C P + G+NC + C + C NGGTC VD
Sbjct: 220 PCNPSPCLNGGTCRQTDDTSYDCTCLPGFSGQNCEENIDDCPS-NNCRNGGTC----VDG 274
Query: 107 TQHRFNCTCPSGYHGKICEK 126
+ +NC CP + G+ C +
Sbjct: 275 V-NTYNCQCPPDWTGQYCTE 293
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 44/96 (45%), Gaps = 15/96 (15%)
Query: 37 YRLIIRPLYS--LC-----PCAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCV 88
+ + RP Y+ LC C PC +G C D+ GY C CP G NC ++ C
Sbjct: 586 FTCLCRPGYTGRLCDNDINECLSKPCLNGGQCTDRENGYICTCPKGTTGVNCETKIDDCA 645
Query: 89 GPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKIC 124
+ C NG +D+ + CTC GY GK+C
Sbjct: 646 S-NLCDNG-----KCIDKIDG-YECTCEPGYTGKLC 674
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C +PC++ S C+D+ + C C P Y G C + C + CL+ G C +D+
Sbjct: 455 CLSNPCQNDSTCLDQIGEFQCICMPGYEGLYCETNIDECAS-NPCLHNGKC----IDKI- 508
Query: 109 HRFNCTCPSGYHGKICE 125
+ F C CP+G+ G +C+
Sbjct: 509 NEFRCDCPTGFSGNLCQ 525
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 45/108 (41%), Gaps = 17/108 (15%)
Query: 29 NVIMLKSDYRLIIRPLYS-------LCPCAYSPCKHG-SCV---DKRAGYFCDCPPTYGG 77
N I L +DYR R ++ + C PC++G +C + G+ C CPP + G
Sbjct: 1282 NCIQLVNDYRCECRQGFTGRRCESVVDGCKGMPCRNGGTCAVASNTERGFICKCPPGFDG 1341
Query: 78 KNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICE 125
C + C C NGGTC L C C GY G C+
Sbjct: 1342 ATCEYDSRTCSNL-RCQNGGTCISVLTSSK-----CVCSEGYTGATCQ 1383
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 12/99 (12%)
Query: 56 KHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGT--CKPYLVDETQHRFNC 113
+G C+D+ GY C CPP + G+ C ++ C+ + C + GT C + D + C
Sbjct: 1239 NNGKCIDRVGGYNCICPPGFVGERCEGDVNECLS-NPCDSRGTQNCIQLVND-----YRC 1292
Query: 114 TCPSGYHGKICEKITT----MSFSGGSHIMLNTTREEGY 148
C G+ G+ CE + M G + + E G+
Sbjct: 1293 ECRQGFTGRRCESVVDGCKGMPCRNGGTCAVASNTERGF 1331
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C PC +G +C D Y C CP Y G NC + C C NGG C +T
Sbjct: 1024 CDSKPCLNGGTCQDSYGTYKCTCPQGYTGLNCQNLVRWCDS-SPCKNGGKCW-----QTN 1077
Query: 109 HRFNCTCPSGYHGKICE 125
+ + C C SG+ G C+
Sbjct: 1078 NFYRCECKSGWTGVYCD 1094
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 13/84 (15%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVG-------PDTCLNGGTCKP 101
C PC++G +C+D Y C CP G +C + + C C N G C
Sbjct: 1186 CLSHPCQNGGTCIDLINTYKCSCPRGTQGVHCEINVDDCTPFYDSFTLEPKCFNNGKC-- 1243
Query: 102 YLVDETQHRFNCTCPSGYHGKICE 125
+D +NC CP G+ G+ CE
Sbjct: 1244 --IDRV-GGYNCICPPGFVGERCE 1264
Score = 33.9 bits (76), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 38/93 (40%), Gaps = 6/93 (6%)
Query: 58 GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPS 117
G+C+ C C Y G C + C NGGTC+ + +E F C CP
Sbjct: 1360 GTCISVLTSSKCVCSEGYTGATCQYPVISPCASHPCYNGGTCQ-FFAEEP--FFQCFCPK 1416
Query: 118 GYHGKICEKITTMSFSGGSHIMLNTTREEGYDI 150
++G C I F GG + N T + DI
Sbjct: 1417 NFNGLFCH-ILDYEFPGG--LGKNITPPDNDDI 1446
Score = 33.5 bits (75), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA + C G+ C D+ A ++C+CP G C ++ C+ + C G C V+
Sbjct: 338 CANAACHSGATCHDRVASFYCECPHGRTGLLCHLD-NACIS-NPCNEGSNCDTNPVN--- 392
Query: 109 HRFNCTCPSGYHGKICEK 126
+ CTCP GY G C
Sbjct: 393 GKAICTCPPGYTGPACNN 410
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 7/74 (9%)
Query: 53 SPCKHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFN 112
P G+ +D + C CP + K C + + C NGGTC+ L T+++
Sbjct: 75 EPVLQGNAID----FICHCPVGFTDKVCLTPVDNACVNNPCRNGGTCE-LLNSVTEYK-- 127
Query: 113 CTCPSGYHGKICEK 126
C CP G+ G C++
Sbjct: 128 CRCPPGWTGDSCQQ 141
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 6/67 (8%)
Query: 58 GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPS 117
G+C + GY C C + G++CS + C C +G TC + F C CP
Sbjct: 309 GTCHNTYGGYNCVCVNGWTGEDCSENIDDCANA-ACHSGATCHDRVA-----SFYCECPH 362
Query: 118 GYHGKIC 124
G G +C
Sbjct: 363 GRTGLLC 369
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 35/87 (40%), Gaps = 15/87 (17%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGC------VGPDT---CLNGGTC 99
C SPCK+G C Y C+C + G C V C G D C N G C
Sbjct: 1062 CDSSPCKNGGKCWQTNNFYRCECKSGWTGVYCDVPSVSCEVAAKQQGVDIVHLCRNSGMC 1121
Query: 100 KPYLVDETQHRFNCTCPSGYHGKICEK 126
VD F C C +GY G CE+
Sbjct: 1122 ----VDTGNTHF-CRCQAGYTGSYCEE 1143
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 8/77 (10%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C +PC++G +C D+ G+ C CP Y C E+ C N C +
Sbjct: 681 CDSNPCRNGGTCKDQINGFTCVCPDGYHDHMCLSEVNEC-------NSNPCIHGACHDGV 733
Query: 109 HRFNCTCPSGYHGKICE 125
+ + C C +G+ G C+
Sbjct: 734 NGYKCDCEAGWSGSNCD 750
>sp|O35516|NOTC2_MOUSE Neurogenic locus notch homolog protein 2 OS=Mus musculus GN=Notch2
PE=1 SV=1
Length = 2470
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 49/91 (53%), Gaps = 8/91 (8%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA +PC+HG+ C D GY C+C P Y G NC E+ C C NGGTC +D
Sbjct: 1151 CASNPCQHGATCNDFIGGYRCECVPGYQGVNCEYEVDECQN-QPCQNGGTC----IDLVN 1205
Query: 109 HRFNCTCPSGYHGKICEKITTMSFSGGSHIM 139
H F C+CP G G +CE+ +GG H +
Sbjct: 1206 H-FKCSCPPGTRGLLCEE-NIDECAGGPHCL 1234
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 50/93 (53%), Gaps = 12/93 (12%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C +PC++G SCVD + C C P + G C ++ C+ + C NGGTC Y+
Sbjct: 913 CLANPCQNGGSCVDHVNTFSCQCHPGFIGDKCQTDMNECLS-EPCKNGGTCSDYV----- 966
Query: 109 HRFNCTCPSGYHGKICEK-----ITTMSFSGGS 136
+ + CTCP+G+HG CE + F+GG+
Sbjct: 967 NSYTCTCPAGFHGVHCENNIDECTESSCFNGGT 999
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 50 CAYSPC-KHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA +PC G+C D +GY C C Y GKNC L C P+ C N CK E+
Sbjct: 797 CASNPCLNQGTCFDDVSGYTCHCMLPYTGKNCQTVLAPC-SPNPCENAAVCKEAPNFES- 854
Query: 109 HRFNCTCPSGYHGKIC 124
F+C C G+ GK C
Sbjct: 855 --FSCLCAPGWQGKRC 868
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 50 CAYSPCKH-GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C PC++ +C+DK G+ C C P + G +C +E+ C + C+N G C VD+
Sbjct: 458 CHSDPCQNDATCLDKIGGFTCLCMPGFKGVHCELEVNECQS-NPCVNNGQC----VDKV- 511
Query: 109 HRFNCTCPSGYHGKICE 125
+RF C CP G+ G +C+
Sbjct: 512 NRFQCLCPPGFTGPVCQ 528
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Query: 50 CAYSPCKHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQH 109
CA +PC HG CVD Y C C P + G+ C++++ C + C G TC +++ +
Sbjct: 647 CASNPCMHGVCVDGINRYSCVCSPGFTGQRCNIDIDECAS-NPCRKGATC----INDV-N 700
Query: 110 RFNCTCPSGYHGKIC 124
F C CP G H C
Sbjct: 701 GFRCICPEGPHHPSC 715
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 11/84 (13%)
Query: 47 LCPCAYSPCKHGSCVDKRAGYF----CDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPY 102
L PC+ +PC++ + V K A F C C P + GK C+V++ C+ C+N G C
Sbjct: 832 LAPCSPNPCENAA-VCKEAPNFESFSCLCAPGWQGKRCTVDVDECIS-KPCMNNGVCH-- 887
Query: 103 LVDETQHRFNCTCPSGYHGKICEK 126
TQ + C CP G+ G CE+
Sbjct: 888 ---NTQGSYVCECPPGFSGMDCEE 908
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 50 CAYSPCKHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQH 109
C +PC HG+C +GY C C + G NC V+ C+ + C NGGTC + +
Sbjct: 722 CLSNPCIHGNCTGGLSGYKCLCDAGWVGVNCEVDKNECLS-NPCQNGGTCNNLV-----N 775
Query: 110 RFNCTCPSGYHGKICE 125
+ CTC G+ G C+
Sbjct: 776 GYRCTCKKGFKGYNCQ 791
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 50 CAYSPC-KHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C PC +G C + + Y C+CPP + G +C ++ C+ + C NGG+C ++
Sbjct: 875 CISKPCMNNGVCHNTQGSYVCECPPGFSGMDCEEDINDCLA-NPCQNGGSCVDHV----- 928
Query: 109 HRFNCTCPSGYHGKICE 125
+ F+C C G+ G C+
Sbjct: 929 NTFSCQCHPGFIGDKCQ 945
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 44 LYSLCPCAYSPC-KHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPY 102
L+ + C+ +PC G+CVD Y C CP Y GKNC + C C N GTC
Sbjct: 1021 LHDINECSSNPCLNAGTCVDGLGTYRCICPLGYTGKNCQTLVNLC-SRSPCKNKGTCV-- 1077
Query: 103 LVDETQHRFNCTCPSGYHGKICEKIT 128
+ + R +C CP G+ G C+ +
Sbjct: 1078 ---QEKARPHCLCPPGWDGAYCDVLN 1100
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 45 YSLCPCAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYL 103
Y + C PC++G +C+D + C CPP G C + C G CLNGG C
Sbjct: 1184 YEVDECQNQPCQNGGTCIDLVNHFKCSCPPGTRGLLCEENIDECAGGPHCLNGGQC---- 1239
Query: 104 VDETQHRFNCTCPSGYHGKICE 125
VD + C C G+ G+ CE
Sbjct: 1240 VDRI-GGYTCRCLPGFAGERCE 1260
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 50 CAYSPC-KHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C +PC +G CVDK + C CPP + G C +++ C CLNG C +D
Sbjct: 496 CQSNPCVNNGQCVDKVNRFQCLCPPGFTGPVCQIDIDDCSS-TPCLNGAKC----IDHP- 549
Query: 109 HRFNCTCPSGYHGKICEK 126
+ + C C +G+ G +C++
Sbjct: 550 NGYECQCATGFTGILCDE 567
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 58 GSCVDKRAGYFCDCPPTYGGKNCSVELTGC-VGPDTCLNGGTCKPYLVDETQHRFNCTCP 116
G CVD Y C CPP + G+ C+ ++ C + P+ C NGGTC + C C
Sbjct: 271 GVCVDGVNTYNCRCPPQWTGQFCTEDVDECLLQPNACQNGGTCT-----NRNGGYGCVCV 325
Query: 117 SGYHGKIC-EKITTMSFS 133
+G+ G C E I +++
Sbjct: 326 NGWSGDDCSENIDDCAYA 343
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 32/76 (42%), Gaps = 6/76 (7%)
Query: 50 CAYSPCKHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQH 109
C PC HG C D Y C C P Y G CS ++ C CLN G C + +
Sbjct: 572 CDPDPCHHGQCQDGIDSYTCICNPGYMGAICSDQIDECYS-SPCLNDGRCIDLV-----N 625
Query: 110 RFNCTCPSGYHGKICE 125
+ C C G G CE
Sbjct: 626 GYQCNCQPGTSGLNCE 641
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 9/84 (10%)
Query: 50 CAYSPCKH-GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDET- 107
C+ SPCK+ G+CV ++A C CPP + G C V C L G +L +
Sbjct: 1065 CSRSPCKNKGTCVQEKARPHCLCPPGWDGAYCDVLNVSCKA--AALQKGVPVEHLCQHSG 1122
Query: 108 -----QHRFNCTCPSGYHGKICEK 126
+ +C CP GY G CE+
Sbjct: 1123 ICINAGNTHHCQCPLGYTGSYCEE 1146
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Query: 50 CAYSPC-KHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C SPC G C+D GY C+C P G NC + C + C++G VD
Sbjct: 609 CYSSPCLNDGRCIDLVNGYQCNCQPGTSGLNCEINFDDCAS-NPCMHG-----VCVDGI- 661
Query: 109 HRFNCTCPSGYHGKIC 124
+R++C C G+ G+ C
Sbjct: 662 NRYSCVCSPGFTGQRC 677
Score = 38.1 bits (87), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 58 GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPS 117
G+CVD + C CP + G C ++ C + CLN GTC L + C CP
Sbjct: 998 GTCVDGINSFSCLCPVGFTGPFCLHDINECSS-NPCLNAGTCVDGL-----GTYRCICPL 1051
Query: 118 GYHGKICEKITTM 130
GY GK C+ + +
Sbjct: 1052 GYTGKNCQTLVNL 1064
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 58 GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPS 117
G CVD+ GY C C P + G+ C ++ C+ + C + G+ + ++ +NC C S
Sbjct: 1237 GQCVDRIGGYTCRCLPGFAGERCEGDINECLS-NPCSSEGS---LDCVQLKNNYNCICRS 1292
Query: 118 GYHGKICE 125
+ G+ CE
Sbjct: 1293 AFTGRHCE 1300
Score = 37.7 bits (86), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C PC++GS C + + C CP G+ C ++ C P C +GGTC
Sbjct: 148 CLSHPCENGSTCTSVASQFSCKCPAGLTGQKCEADINECDIPGRCQHGGTCL-----NLP 202
Query: 109 HRFNCTCPSGYHGKICE 125
+ C C G+ G+ C+
Sbjct: 203 GSYRCQCGQGFTGQHCD 219
Score = 37.4 bits (85), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 10/80 (12%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDET- 107
CAY+ C GS C+D+ A + C CP G C ++ D C++ K L D
Sbjct: 340 CAYASCTPGSTCIDRVASFSCLCPEGKAGLLCHLD-------DACISNPCHKGALCDTNP 392
Query: 108 -QHRFNCTCPSGYHGKICEK 126
++ CTCP GY G C +
Sbjct: 393 LNGQYICTCPQGYKGADCTE 412
Score = 36.2 bits (82), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C +PC++G +C + GY C C + G NC V + C + CLN GTC D+
Sbjct: 759 CLSNPCQNGGTCNNLVNGYRCTCKKGFKGYNCQVNIDECAS-NPCLNQGTC----FDDVS 813
Query: 109 HRFNCTCPSGYHGKICEKI 127
+ C C Y GK C+ +
Sbjct: 814 -GYTCHCMLPYTGKNCQTV 831
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 10/81 (12%)
Query: 50 CAYSPCKHGSCVDKR---AGYFCDCPPTYGGKNCSVELTGCVGPDT--CLNGGTCKPYLV 104
C +PC G+ D Y C CP Y G +C+ ++ C ++ C + G C
Sbjct: 377 CISNPCHKGALCDTNPLNGQYICTCPQGYKGADCTEDVDECAMANSNPCEHAGKCV---- 432
Query: 105 DETQHRFNCTCPSGYHGKICE 125
T F+C C GY G CE
Sbjct: 433 -NTDGAFHCECLKGYAGPRCE 452
Score = 34.3 bits (77), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Query: 50 CAYSPCK-HGS--CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDE 106
C +PC GS CV + Y C C + G++C L C CLNGGTC +
Sbjct: 1266 CLSNPCSSEGSLDCVQLKNNYNCICRSAFTGRHCETFLDVCPQ-KPCLNGGTCA--VASN 1322
Query: 107 TQHRFNCTCPSGYHG 121
F C CP G+ G
Sbjct: 1323 MPDGFICRCPPGFSG 1337
Score = 33.9 bits (76), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 8/85 (9%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C+ +PC +G+ C+D GY C C + G C + C PD C +G +
Sbjct: 534 CSSTPCLNGAKCIDHPNGYECQCATGFTGILCDENIDNC-DPDPCHHG------QCQDGI 586
Query: 109 HRFNCTCPSGYHGKICEKITTMSFS 133
+ C C GY G IC +S
Sbjct: 587 DSYTCICNPGYMGAICSDQIDECYS 611
Score = 33.9 bits (76), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
Query: 58 GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPS 117
G+C ++ GY C C + G +CS + C +C G TC +D F+C CP
Sbjct: 311 GTCTNRNGGYGCVCVNGWSGDDCSENIDDCAYA-SCTPGSTC----IDRVA-SFSCLCPE 364
Query: 118 GYHGKIC 124
G G +C
Sbjct: 365 GKAGLLC 371
Score = 33.5 bits (75), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 3/36 (8%)
Query: 50 CAYSPCKHG-SCVDKRAG--YFCDCPPTYGGKNCSV 82
CA +PC+HG +C +R Y C CPP++GG +C +
Sbjct: 1376 CASNPCQHGGTCYPQRQPPHYSCRCPPSFGGSHCEL 1411
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 8/81 (9%)
Query: 49 PCAYSPCKHG-SCVDK--RAGYFCDCPPTYGGKNCSVELT-GCVGPDTCLNGGTCKPYLV 104
PC + C++G +CV + C C P + G++C + C C NGGTC
Sbjct: 67 PCEKNRCQNGGTCVPQGMLGKATCRCAPGFTGEDCQYSTSHPCFVSRPCQNGGTCHMLSR 126
Query: 105 DETQHRFNCTCPSGYHGKICE 125
D + CTC G+ GK C+
Sbjct: 127 D----TYECTCQVGFTGKQCQ 143
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 8/73 (10%)
Query: 55 CKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNC 113
C+HG +C++ Y C C + G++C V C+NGGTC+ C
Sbjct: 192 CQHGGTCLNLPGSYRCQCGQGFTGQHCDSPY---VRGLPCVNGGTCR----QTGDFTLEC 244
Query: 114 TCPSGYHGKICEK 126
C G+ G CE+
Sbjct: 245 NCLPGFEGSTCER 257
Score = 29.6 bits (65), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 54/141 (38%), Gaps = 42/141 (29%)
Query: 28 LNVIMLKSDYRLIIRPLYS-------LCPCAYSPCKHG-SCV---DKRAGYFCDCPPTYG 76
L+ + LK++Y I R ++ L C PC +G +C + G+ C CPP +
Sbjct: 1277 LDCVQLKNNYNCICRSAFTGRHCETFLDVCPQKPCLNGGTCAVASNMPDGFICRCPPGFS 1336
Query: 77 G---------------KNCSVELTG----CVGP---------DTCLNGGTCKPYLVDETQ 108
G + C +G C+ P + C +GGTC P
Sbjct: 1337 GARLQSSCGQVKCRRGEQCIHTDSGPRCFCLNPKDCESGCASNPCQHGGTCYP---QRQP 1393
Query: 109 HRFNCTCPSGYHGKICEKITT 129
++C CP + G CE T
Sbjct: 1394 PHYSCRCPPSFGGSHCELYTA 1414
>sp|Q5IS41|NCAN_PANTR Neurocan core protein OS=Pan troglodytes GN=NCAN PE=2 SV=1
Length = 1321
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 49 PCAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDET 107
PC +PC HG +C Y C C + G+NC +++ C+ C NGGTC +DE
Sbjct: 1011 PCENNPCLHGGTCNANGTMYGCSCDQGFAGENCEIDIDDCLC-SPCENGGTC----IDEV 1065
Query: 108 QHRFNCTCPSGYHGKICEKIT 128
+ F C C Y G CEK T
Sbjct: 1066 -NGFVCLCLPSYGGSFCEKDT 1085
Score = 43.9 bits (102), Expect = 4e-04, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGC 87
C SPC++G +C+D+ G+ C C P+YGG C + GC
Sbjct: 1050 CLCSPCENGGTCIDEVNGFVCLCLPSYGGSFCEKDTEGC 1088
>sp|O14594|NCAN_HUMAN Neurocan core protein OS=Homo sapiens GN=NCAN PE=2 SV=3
Length = 1321
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/81 (38%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 49 PCAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDET 107
PC +PC HG +C Y C C + G+NC +++ C+ C NGGTC +DE
Sbjct: 1011 PCENNPCLHGGTCNANGTMYGCSCDQGFAGENCEIDIDDCLC-SPCENGGTC----IDEV 1065
Query: 108 QHRFNCTCPSGYHGKICEKIT 128
+ F C C Y G CEK T
Sbjct: 1066 -NGFVCLCLPSYGGSFCEKDT 1085
Score = 43.9 bits (102), Expect = 4e-04, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGC 87
C SPC++G +C+D+ G+ C C P+YGG C + GC
Sbjct: 1050 CLCSPCENGGTCIDEVNGFVCLCLPSYGGSFCEKDTEGC 1088
>sp|Q04721|NOTC2_HUMAN Neurogenic locus notch homolog protein 2 OS=Homo sapiens GN=NOTCH2
PE=1 SV=3
Length = 2471
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA +PC+HG+ C D GY C+C P Y G NC E+ C C NGGTC +D
Sbjct: 1153 CASNPCQHGATCSDFIGGYRCECVPGYQGVNCEYEVDECQN-QPCQNGGTC----IDLVN 1207
Query: 109 HRFNCTCPSGYHGKICEK 126
H F C+CP G G +CE+
Sbjct: 1208 H-FKCSCPPGTRGLLCEE 1224
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 50 CAYSPCKH-GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C PC++ +C+DK G+ C C P + G +C +E+ C + C+N G C VD+
Sbjct: 460 CHSDPCQNDATCLDKIGGFTCLCMPGFKGVHCELEINECQS-NPCVNNGQC----VDKV- 513
Query: 109 HRFNCTCPSGYHGKICE 125
+RF C CP G+ G +C+
Sbjct: 514 NRFQCLCPPGFTGPVCQ 530
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 50 CAYSPCKHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQH 109
C +PC HG+C +GY C C + G NC V+ C+ + C NGGTC D +
Sbjct: 724 CLSNPCIHGNCTGGLSGYKCLCDAGWVGINCEVDKNECLS-NPCQNGGTC-----DNLVN 777
Query: 110 RFNCTCPSGYHGKICE 125
+ CTC G+ G C+
Sbjct: 778 GYRCTCKKGFKGYNCQ 793
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Query: 50 CAYSPC-KHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA +PC G+C D +GY C C Y GKNC L C P+ C N CK E+
Sbjct: 799 CASNPCLNQGTCFDDISGYTCHCVLPYTGKNCQTVLAPC-SPNPCENAAVCKESPNFES- 856
Query: 109 HRFNCTCPSGYHGKIC 124
+ C C G+ G+ C
Sbjct: 857 --YTCLCAPGWQGQRC 870
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 44 LYSLCPCAYSPC-KHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPY 102
L+ + C+ PC G+CVD Y C CP Y GKNC + C C N GTC
Sbjct: 1023 LHEINECSSHPCLNEGTCVDGLGTYRCSCPLGYTGKNCQTLVNLCSR-SPCKNKGTCV-- 1079
Query: 103 LVDETQHRFNCTCPSGYHGKICE 125
+ + C CPSG+ G C+
Sbjct: 1080 ---QKKAESQCLCPSGWAGAYCD 1099
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 50 CAYSPC-KHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C PC HG C + + Y C+CPP + G +C ++ C+ + C NGG+C +
Sbjct: 877 CISKPCMNHGLCHNTQGSYMCECPPGFSGMDCEEDIDDCLA-NPCQNGGSCM-----DGV 930
Query: 109 HRFNCTCPSGYHGKICE 125
+ F+C C G+ G C+
Sbjct: 931 NTFSCLCLPGFTGDKCQ 947
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 12/93 (12%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C +PC++G SC+D + C C P + G C ++ C+ + C NGGTC Y+
Sbjct: 915 CLANPCQNGGSCMDGVNTFSCLCLPGFTGDKCQTDMNECLS-EPCKNGGTCSDYV----- 968
Query: 109 HRFNCTCPSGYHGKICEK-----ITTMSFSGGS 136
+ + C C +G+ G CE + F+GG+
Sbjct: 969 NSYTCKCQAGFDGVHCENNINECTESSCFNGGT 1001
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 50 CAYSPC-KHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C +PC +G CVDK + C CPP + G C +++ C CLNG C +D
Sbjct: 498 CQSNPCVNNGQCVDKVNRFQCLCPPGFTGPVCQIDIDDCSS-TPCLNGAKC----IDHP- 551
Query: 109 HRFNCTCPSGYHGKICEK 126
+ + C C +G+ G +CE+
Sbjct: 552 NGYECQCATGFTGVLCEE 569
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 50 CAYSPCKHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQH 109
CA +PC HG C+D Y C C P + G+ C++++ C + C G TC + +
Sbjct: 649 CASNPCIHGICMDGINRYSCVCSPGFTGQRCNIDIDECAS-NPCRKGATCINGV-----N 702
Query: 110 RFNCTCPSGYHGKIC 124
F C CP G H C
Sbjct: 703 GFRCICPEGPHHPSC 717
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 47 LCPCAYSPCKHGSCVDKR---AGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYL 103
L PC+ +PC++ + + Y C C P + G+ C++++ C+ C+N G C
Sbjct: 834 LAPCSPNPCENAAVCKESPNFESYTCLCAPGWQGQRCTIDIDECIS-KPCMNHGLCH--- 889
Query: 104 VDETQHRFNCTCPSGYHGKICEK 126
TQ + C CP G+ G CE+
Sbjct: 890 --NTQGSYMCECPPGFSGMDCEE 910
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 58 GSCVDKRAGYFCDCPPTYGGKNCSVELTGC-VGPDTCLNGGTCKPYLVDETQHRFNCTCP 116
G CVD Y C CPP + G+ C+ ++ C + P+ C NGGTC + C C
Sbjct: 273 GVCVDGVNTYNCRCPPQWTGQFCTEDVDECLLQPNACQNGGTCA-----NRNGGYGCVCV 327
Query: 117 SGYHGKIC-EKITTMSFS 133
+G+ G C E I +F+
Sbjct: 328 NGWSGDDCSENIDDCAFA 345
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 55 CKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNC 113
C+HG +C++ Y C CP + G+ C C P C+NGGTC+ F C
Sbjct: 192 CQHGGTCLNLPGSYQCQCPQGFTGQYCDSLYVPCA-PSPCVNGGTCR----QTGDFTFEC 246
Query: 114 TCPSGYHGKICEK 126
C G+ G CE+
Sbjct: 247 NCLPGFEGSTCER 259
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 6/82 (7%)
Query: 45 YSLCPCAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYL 103
Y + C PC++G +C+D + C CPP G C + C CLNGG C +
Sbjct: 1186 YEVDECQNQPCQNGGTCIDLVNHFKCSCPPGTRGLLCEENIDDCARGPHCLNGGQCMDRI 1245
Query: 104 VDETQHRFNCTCPSGYHGKICE 125
++C C G+ G+ CE
Sbjct: 1246 -----GGYSCRCLPGFAGERCE 1262
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 32/76 (42%), Gaps = 6/76 (7%)
Query: 50 CAYSPCKHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQH 109
C PC HG C D Y C C P Y G CS ++ C CLN G C + +
Sbjct: 574 CDPDPCHHGQCQDGIDSYTCICNPGYMGAICSDQIDECYS-SPCLNDGRCIDLV-----N 627
Query: 110 RFNCTCPSGYHGKICE 125
+ C C G G CE
Sbjct: 628 GYQCNCQPGTSGVNCE 643
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 58 GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPS 117
G+CVD + C CP + G C E+ C CLN GTC L + C+CP
Sbjct: 1000 GTCVDGINSFSCLCPVGFTGSFCLHEINECSS-HPCLNEGTCVDGL-----GTYRCSCPL 1053
Query: 118 GYHGKICEKITTM 130
GY GK C+ + +
Sbjct: 1054 GYTGKNCQTLVNL 1066
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Query: 50 CAYSPC-KHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C SPC G C+D GY C+C P G NC + C + C++G + +
Sbjct: 611 CYSSPCLNDGRCIDLVNGYQCNCQPGTSGVNCEINFDDCAS-NPCIHG------ICMDGI 663
Query: 109 HRFNCTCPSGYHGKIC 124
+R++C C G+ G+ C
Sbjct: 664 NRYSCVCSPGFTGQRC 679
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 6/79 (7%)
Query: 50 CAYSPCKHGSCVDKRAGYF-CDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C PC +GS A F C C + G+ C ++ C P C +GGTC
Sbjct: 148 CLSHPCANGSTCTTVANQFSCKCLTGFTGQKCETDVNECDIPGHCQHGGTCL-----NLP 202
Query: 109 HRFNCTCPSGYHGKICEKI 127
+ C CP G+ G+ C+ +
Sbjct: 203 GSYQCQCPQGFTGQYCDSL 221
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 10/81 (12%)
Query: 49 PCAYSPCKHGSCVDKRAGYF---CDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVD 105
PCA SPC +G ++ G F C+C P + G C + C C NGG C VD
Sbjct: 224 PCAPSPCVNGGTC-RQTGDFTFECNCLPGFEGSTCERNIDDCPN-HRCQNGGVC----VD 277
Query: 106 ETQHRFNCTCPSGYHGKICEK 126
+ +NC CP + G+ C +
Sbjct: 278 GV-NTYNCRCPPQWTGQFCTE 297
Score = 36.6 bits (83), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
Query: 53 SPCKH-GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRF 111
+PC+H G CV+ + C+C Y G C +++ C D C N TC + F
Sbjct: 425 NPCEHAGKCVNTDGAFHCECLKGYAGPRCEMDINECHS-DPCQNDATCLDKI-----GGF 478
Query: 112 NCTCPSGYHGKICE 125
C C G+ G CE
Sbjct: 479 TCLCMPGFKGVHCE 492
Score = 36.6 bits (83), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
Query: 55 CKH-GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNC 113
C+H G C++ ++C CP Y G C +L C + C +G TC ++ + C
Sbjct: 1120 CQHSGVCINAGNTHYCQCPLGYTGSYCEEQLDECAS-NPCQHGATCSDFI-----GGYRC 1173
Query: 114 TCPSGYHGKICE 125
C GY G CE
Sbjct: 1174 ECVPGYQGVNCE 1185
Score = 36.2 bits (82), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 10/80 (12%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDET- 107
CA++ C GS C+D+ A + C CP G C ++ D C++ K L D
Sbjct: 342 CAFASCTPGSTCIDRVASFSCMCPEGKAGLLCHLD-------DACISNPCHKGALCDTNP 394
Query: 108 -QHRFNCTCPSGYHGKICEK 126
++ CTCP GY G C +
Sbjct: 395 LNGQYICTCPQGYKGADCTE 414
Score = 35.8 bits (81), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C +PC++G +C + GY C C + G NC V + C + CLN GTC D+
Sbjct: 761 CLSNPCQNGGTCDNLVNGYRCTCKKGFKGYNCQVNIDECAS-NPCLNQGTC----FDDIS 815
Query: 109 HRFNCTCPSGYHGKICEKI 127
+ C C Y GK C+ +
Sbjct: 816 -GYTCHCVLPYTGKNCQTV 833
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 15/87 (17%)
Query: 50 CAYSPCKH-GSCVDKRAGYFCDCPPTYGGKNCSVELTGC---------VGPDTCLNGGTC 99
C+ SPCK+ G+CV K+A C CP + G C V C + C + G C
Sbjct: 1067 CSRSPCKNKGTCVQKKAESQCLCPSGWAGAYCDVPNVSCDIAASRRGVLVEHLCQHSGVC 1126
Query: 100 KPYLVDETQHRFNCTCPSGYHGKICEK 126
++ + C CP GY G CE+
Sbjct: 1127 ----INAGNTHY-CQCPLGYTGSYCEE 1148
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 10/81 (12%)
Query: 50 CAYSPCKHGSCVDKR---AGYFCDCPPTYGGKNCSVELTGC--VGPDTCLNGGTCKPYLV 104
C +PC G+ D Y C CP Y G +C+ ++ C + C + G C
Sbjct: 379 CISNPCHKGALCDTNPLNGQYICTCPQGYKGADCTEDVDECAMANSNPCEHAGKCV---- 434
Query: 105 DETQHRFNCTCPSGYHGKICE 125
T F+C C GY G CE
Sbjct: 435 -NTDGAFHCECLKGYAGPRCE 454
Score = 34.3 bits (77), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 8/85 (9%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C+ +PC +G+ C+D GY C C + G C + C PD C +G +
Sbjct: 536 CSSTPCLNGAKCIDHPNGYECQCATGFTGVLCEENIDNC-DPDPCHHG------QCQDGI 588
Query: 109 HRFNCTCPSGYHGKICEKITTMSFS 133
+ C C GY G IC +S
Sbjct: 589 DSYTCICNPGYMGAICSDQIDECYS 613
Score = 33.5 bits (75), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 35/79 (44%), Gaps = 6/79 (7%)
Query: 50 CAYSPCK-HGS--CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDE 106
C +PC GS C+ Y C C + G++C + C CLNGGTC +
Sbjct: 1268 CLSNPCSSEGSLDCIQLTNDYLCVCRSAFTGRHCETFVDVCPQ-MPCLNGGTCA--VASN 1324
Query: 107 TQHRFNCTCPSGYHGKICE 125
F C CP G+ G C+
Sbjct: 1325 MPDGFICRCPPGFSGARCQ 1343
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 8/75 (10%)
Query: 58 GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ--HRFNCTC 115
G C+D+ GY C C P + G+ C ++ C+ + C + G+ +D Q + + C C
Sbjct: 1239 GQCMDRIGGYSCRCLPGFAGERCEGDINECLS-NPCSSEGS-----LDCIQLTNDYLCVC 1292
Query: 116 PSGYHGKICEKITTM 130
S + G+ CE +
Sbjct: 1293 RSAFTGRHCETFVDV 1307
Score = 29.6 bits (65), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 8/90 (8%)
Query: 43 PLYSL-CPCAYSPC-KHGSCVDKRAGY-FCDCPPTYGGKNCSVELTGCVGPDTCLNGGTC 99
P ++L C Y PC G CV G +C CP + G+ C + C NGGTC
Sbjct: 22 PAHALQCRDGYEPCVNEGMCVTYHNGTGYCKCPEGFLGEYCQHRDP--CEKNRCQNGGTC 79
Query: 100 KPYLVDETQHRFNCTCPSGYHGKICEKITT 129
+ + C C SG+ G+ C+ T+
Sbjct: 80 ---VAQAMLGKATCRCASGFTGEDCQYSTS 106
Score = 29.3 bits (64), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Query: 50 CAYSPCKHG-SCVDKRAG--YFCDCPPTYGGKNCSV 82
CA SPC+HG SC +R Y C C P + G C +
Sbjct: 1378 CASSPCQHGGSCHPQRQPPYYSCQCAPPFSGSRCEL 1413
>sp|Q9QW30|NOTC2_RAT Neurogenic locus notch homolog protein 2 OS=Rattus norvegicus
GN=Notch2 PE=1 SV=1
Length = 2471
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA +PC+HG+ C D GY C+C P Y G NC E+ C C NGGTC +D
Sbjct: 1153 CASNPCQHGATCSDFIGGYRCECVPGYQGVNCEYEVDECQN-QPCQNGGTC----IDLVN 1207
Query: 109 HRFNCTCPSGYHGKICEK 126
H F C+CP G G +CE+
Sbjct: 1208 H-FKCSCPPGTRGLLCEE 1224
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 12/93 (12%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C +PC++G SCVDK + C C P + G C ++ C+ + C NGGTC Y+
Sbjct: 915 CLANPCQNGGSCVDKVNTFSCLCLPGFVGDKCQTDMNECLS-EPCKNGGTCSDYV----- 968
Query: 109 HRFNCTCPSGYHGKICEK-----ITTMSFSGGS 136
+ + CTCP+G+HG CE + F+GG+
Sbjct: 969 NSYTCTCPAGFHGVHCENNIDECTESSCFNGGT 1001
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 44 LYSLCPCAYSPC-KHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPY 102
L+ + C+ +PC G+CVD Y C CP Y GKNC + C P C N GTC
Sbjct: 1023 LHDINECSSNPCLNSGTCVDGLGTYRCTCPLGYTGKNCQTLVNLC-SPSPCKNKGTCA-- 1079
Query: 103 LVDETQHRFNCTCPSGYHGKICEKIT 128
+ + R C CP G+ G C+ +
Sbjct: 1080 ---QEKARPRCLCPPGWDGAYCDVLN 1102
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 50 CAYSPCKH-GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C PC++ +C+DK G+ C C P + G +C +E+ C + C+N G C VD+
Sbjct: 460 CHSDPCQNDATCLDKIGGFTCLCMPGFKGVHCELEVNECQS-NPCVNNGQC----VDKV- 513
Query: 109 HRFNCTCPSGYHGKICE 125
+RF C CP G+ G +C+
Sbjct: 514 NRFQCLCPPGFTGPVCQ 530
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 50 CAYSPC-KHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA +PC G+C+D +GY C C Y GKNC L C P+ C N CK E+
Sbjct: 799 CASNPCLNQGTCLDDVSGYTCHCMLPYTGKNCQTVLAPC-SPNPCENAAVCKEAPNFES- 856
Query: 109 HRFNCTCPSGYHGKIC 124
F C C G+ G+ C
Sbjct: 857 --FTCLCAPGWQGQRC 870
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Query: 50 CAYSPCKHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQH 109
C SPC HG+C +GY C C + G NC V+ C+ + C NGGTC + +
Sbjct: 724 CLSSPCIHGNCTGGLSGYKCLCDAGWVGINCEVDKNECLS-NPCQNGGTCNNLV-----N 777
Query: 110 RFNCTCPSGYHGKICE 125
+ CTC G+ G C+
Sbjct: 778 GYRCTCKKGFKGYNCQ 793
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 11/84 (13%)
Query: 47 LCPCAYSPCKHGSCVDKRAGYF----CDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPY 102
L PC+ +PC++ + V K A F C C P + G+ C+V++ CV C+N G C
Sbjct: 834 LAPCSPNPCENAA-VCKEAPNFESFTCLCAPGWQGQRCTVDVDECVS-KPCMNNGICH-- 889
Query: 103 LVDETQHRFNCTCPSGYHGKICEK 126
TQ + C CP G+ G CE+
Sbjct: 890 ---NTQGSYMCECPPGFSGMDCEE 910
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Query: 50 CAYSPCKHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQH 109
CA +PC HG+CVD Y C C P + G+ C++++ C + C TC +++ +
Sbjct: 649 CASNPCLHGACVDGINRYSCVCSPGFTGQRCNIDIDECAS-NPCRKDATC----INDV-N 702
Query: 110 RFNCTCPSGYHGKIC 124
F C CP G H C
Sbjct: 703 GFRCMCPEGPHHPSC 717
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 50 CAYSPC-KHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C PC +G C + + Y C+CPP + G +C ++ C+ + C NGG+C VD+
Sbjct: 877 CVSKPCMNNGICHNTQGSYMCECPPGFSGMDCEEDINDCLA-NPCQNGGSC----VDKV- 930
Query: 109 HRFNCTCPSGYHGKICE 125
+ F+C C G+ G C+
Sbjct: 931 NTFSCLCLPGFVGDKCQ 947
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Query: 45 YSLCPCAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYL 103
Y + C PC++G +C+D + C CPP G C + C G CLNGG C
Sbjct: 1186 YEVDECQNQPCQNGGTCIDLVNHFKCSCPPGTRGLLCEENIDDCAGAPHCLNGGQC---- 1241
Query: 104 VDETQHRFNCTCPSGYHGKICE 125
VD ++C C G+ G+ CE
Sbjct: 1242 VDRI-GGYSCRCLPGFAGERCE 1262
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 58 GSCVDKRAGYFCDCPPTYGGKNCSVELTGC-VGPDTCLNGGTCKPYLVDETQHRFNCTCP 116
G CVD Y C CPP + G+ C+ ++ C + P+ C NGGTC + C C
Sbjct: 273 GVCVDGVNTYNCRCPPQWTGQFCTEDVDECLLQPNACQNGGTCT-----NRNGGYGCVCV 327
Query: 117 SGYHGKIC-EKITTMSFS 133
+G+ G C E I +F+
Sbjct: 328 NGWSGDDCSENIDDCAFA 345
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 50 CAYSPC-KHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C +PC +G CVDK + C CPP + G C +++ C CLNG C +D
Sbjct: 498 CQSNPCVNNGQCVDKVNRFQCLCPPGFTGPVCQIDIDDCSS-TPCLNGAKC----IDHP- 551
Query: 109 HRFNCTCPSGYHGKICEK 126
+ + C C +G+ G +C++
Sbjct: 552 NGYECQCATGFTGTLCDE 569
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 55 CKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNC 113
C+HG +C++ Y C CP + G++C C P C+NGGTC+ C
Sbjct: 192 CQHGGTCLNLPGSYRCQCPQRFTGQHCDSPYVPCA-PSPCVNGGTCR----QTGDFTSEC 246
Query: 114 TCPSGYHGKICEK 126
C G+ G CE+
Sbjct: 247 HCLPGFEGSNCER 259
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Query: 58 GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPS 117
G+CVD + C CP + G C ++ C + CLN GTC L + CTCP
Sbjct: 1000 GTCVDGINSFSCLCPVGFTGPFCLHDINECSS-NPCLNSGTCVDGL-----GTYRCTCPL 1053
Query: 118 GYHGKICEKITTM 130
GY GK C+ + +
Sbjct: 1054 GYTGKNCQTLVNL 1066
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Query: 50 CAYSPC-KHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C SPC G C+D GY C+C P G NC + C + CL+G VD
Sbjct: 611 CYSSPCLNDGRCIDLVNGYQCNCQPGTSGLNCEINFDDCAS-NPCLHGA-----CVDGI- 663
Query: 109 HRFNCTCPSGYHGKIC 124
+R++C C G+ G+ C
Sbjct: 664 NRYSCVCSPGFTGQRC 679
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 32/76 (42%), Gaps = 6/76 (7%)
Query: 50 CAYSPCKHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQH 109
C PC HG C D Y C C P Y G CS ++ C CLN G C + +
Sbjct: 574 CDPDPCHHGQCQDGIDSYTCICNPGYMGAICSDQIDECYS-SPCLNDGRCIDLV-----N 627
Query: 110 RFNCTCPSGYHGKICE 125
+ C C G G CE
Sbjct: 628 GYQCNCQPGTSGLNCE 643
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 10/81 (12%)
Query: 49 PCAYSPCKHGSCVDKRAGYF---CDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVD 105
PCA SPC +G ++ G F C C P + G NC + C C NGG C VD
Sbjct: 224 PCAPSPCVNGGTC-RQTGDFTSECHCLPGFEGSNCERNIDDCPN-HKCQNGGVC----VD 277
Query: 106 ETQHRFNCTCPSGYHGKICEK 126
+ +NC CP + G+ C +
Sbjct: 278 GV-NTYNCRCPPQWTGQFCTE 297
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Query: 50 CAYSPCKHGSCVDKRAGYF-CDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C PC++GS A F C CP G+ C ++ C P C +GGTC
Sbjct: 148 CLSHPCENGSTCSSVANQFSCRCPAGITGQKCDADINECDIPGRCQHGGTCL-----NLP 202
Query: 109 HRFNCTCPSGYHGKICE 125
+ C CP + G+ C+
Sbjct: 203 GSYRCQCPQRFTGQHCD 219
Score = 37.0 bits (84), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C +PC++G +C + GY C C + G NC V + C + CLN GTC L D +
Sbjct: 761 CLSNPCQNGGTCNNLVNGYRCTCKKGFKGYNCQVNIDECAS-NPCLNQGTC---LDDVSG 816
Query: 109 HRFNCTCPSGYHGKICEKI 127
+ +C P Y GK C+ +
Sbjct: 817 YTCHCMLP--YTGKNCQTV 833
Score = 36.6 bits (83), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Query: 50 CAYSPCK-HGS--CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDE 106
C +PC GS C+ + Y C C + G++C L C CLNGGTC +
Sbjct: 1268 CLSNPCSSEGSLDCIQLKNNYQCVCRSAFTGRHCETFLDVCPQ-KPCLNGGTCA--VASN 1324
Query: 107 TQHRFNCTCPSGYHGKICE 125
F C CP G+ G C+
Sbjct: 1325 VPDGFICRCPPGFSGARCQ 1343
Score = 36.2 bits (82), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 9/84 (10%)
Query: 50 CAYSPCKH-GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDET- 107
C+ SPCK+ G+C ++A C CPP + G C V C L G +L +
Sbjct: 1067 CSPSPCKNKGTCAQEKARPRCLCPPGWDGAYCDVLNVSCKA--AALQKGVPVEHLCQHSG 1124
Query: 108 -----QHRFNCTCPSGYHGKICEK 126
+ +C CP GY G CE+
Sbjct: 1125 ICINAGNTHHCQCPLGYTGSYCEE 1148
Score = 35.8 bits (81), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 58 GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPS 117
G CVD+ GY C C P + G+ C ++ C+ + C + G+ + ++ + C C S
Sbjct: 1239 GQCVDRIGGYSCRCLPGFAGERCEGDINECLS-NPCSSEGS---LDCIQLKNNYQCVCRS 1294
Query: 118 GYHGKICE 125
+ G+ CE
Sbjct: 1295 AFTGRHCE 1302
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 10/81 (12%)
Query: 50 CAYSPCKHGSCVDKR---AGYFCDCPPTYGGKNCSVELTGC--VGPDTCLNGGTCKPYLV 104
C +PC G+ D Y C CP Y G +C+ ++ C + C + G C
Sbjct: 379 CISNPCHKGALCDTNPLNGQYICTCPQAYKGADCTEDVDECAMANSNPCEHAGKCV---- 434
Query: 105 DETQHRFNCTCPSGYHGKICE 125
T F+C C GY G CE
Sbjct: 435 -NTDGAFHCECLKGYAGPRCE 454
Score = 34.7 bits (78), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 8/85 (9%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C+ +PC +G+ C+D GY C C + G C + C PD C +G +
Sbjct: 536 CSSTPCLNGAKCIDHPNGYECQCATGFTGTLCDENIDNC-DPDPCHHG------QCQDGI 588
Query: 109 HRFNCTCPSGYHGKICEKITTMSFS 133
+ C C GY G IC +S
Sbjct: 589 DSYTCICNPGYMGAICSDQIDECYS 613
Score = 34.7 bits (78), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 7/72 (9%)
Query: 55 CKH-GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNC 113
C+H G C++ + C CP Y G C +L C + C +G TC ++ + C
Sbjct: 1120 CQHSGICINAGNTHHCQCPLGYTGSYCEEQLDECAS-NPCQHGATCSDFI-----GGYRC 1173
Query: 114 TCPSGYHGKICE 125
C GY G CE
Sbjct: 1174 ECVPGYQGVNCE 1185
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA++ C GS C+D+ A + C CP G C ++ C+ + C G C +
Sbjct: 342 CAFASCTPGSTCIDRVASFSCLCPEGKAGLLCHLD-DACIS-NPCHKGALCD---TNPLN 396
Query: 109 HRFNCTCPSGYHGKICEK 126
++ CTCP Y G C +
Sbjct: 397 GQYICTCPQAYKGADCTE 414
Score = 33.1 bits (74), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 8/81 (9%)
Query: 49 PCAYSPCKHG-SCVDKR--AGYFCDCPPTYGGKNCSVELT-GCVGPDTCLNGGTCKPYLV 104
PC + C++G +CV + C C P + G++C + C C NGGTC
Sbjct: 67 PCEKNRCQNGGTCVTQAMLGKATCRCAPGFTGEDCQYSTSHPCFVSRPCQNGGTCHMLSW 126
Query: 105 DETQHRFNCTCPSGYHGKICE 125
D + CTC G+ GK C+
Sbjct: 127 D----TYECTCQVGFTGKQCQ 143
Score = 29.3 bits (64), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 51/142 (35%), Gaps = 44/142 (30%)
Query: 28 LNVIMLKSDYRLIIRPLYS-------LCPCAYSPCKHG-SCV---DKRAGYFCDCPPTYG 76
L+ I LK++Y+ + R ++ L C PC +G +C + G+ C CPP +
Sbjct: 1279 LDCIQLKNNYQCVCRSAFTGRHCETFLDVCPQKPCLNGGTCAVASNVPDGFICRCPPGFS 1338
Query: 77 GKNCSVEL-----------------------------TGCVGPDTCLNGGTCKPYLVDET 107
G C +GC + C +GGTC P
Sbjct: 1339 GARCQSSCGQVKCRRGEQCVHTASGPHCFCPNHKDCESGCAS-NPCQHGGTCYP---QRQ 1394
Query: 108 QHRFNCTCPSGYHGKICEKITT 129
++C C + G CE T
Sbjct: 1395 PPYYSCRCSPPFWGSHCESYTA 1416
>sp|Q61982|NOTC3_MOUSE Neurogenic locus notch homolog protein 3 OS=Mus musculus GN=Notch3
PE=1 SV=1
Length = 2318
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Query: 50 CAYSPCKHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQH 109
C SPC G+C D A + C CPP YGG +C ++L C P +C NGGTC VD
Sbjct: 892 CLSSPCGPGTCTDHVASFTCACPPGYGGFHCEIDLPDC-SPSSCFNGGTC----VDGVSS 946
Query: 110 RFNCTCPSGYHGKICEKITTMSFS 133
F+C C GY G C+ FS
Sbjct: 947 -FSCLCRPGYTGTHCQYEADPCFS 969
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 14/90 (15%)
Query: 49 PCAYSPCKHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLN-----GGTCKPYL 103
PCA+ PC HG C D G+ C C P + G CS L PD C + GGTC
Sbjct: 699 PCAHKPCSHGVCHDAPGGFRCVCEPGWSGPRCSQSLA----PDACESQPCQAGGTCTSDG 754
Query: 104 VDETQHRFNCTCPSGYHGKICEKITTMSFS 133
+ F CTC G+ G CE ++ + S
Sbjct: 755 IG-----FRCTCAPGFQGHQCEVLSPCTPS 779
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 49 PCAYSPCKHGS--CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDE 106
PC PC HG+ V + C CPP Y G++C ++ C TC +GGTC
Sbjct: 123 PCVSRPCVHGAPCSVGPDGRFACACPPGYQGQSCQSDIDECRSGTTCRHGGTCL-----N 177
Query: 107 TQHRFNCTCPSGYHGKICEK 126
T F C CP GY G +CE
Sbjct: 178 TPGSFRCQCPLGYTGLLCEN 197
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 39/78 (50%), Gaps = 7/78 (8%)
Query: 49 PCAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDET 107
PC PC+HG +C GY C+CP Y G +C + C C NGG+C +
Sbjct: 1088 PCTAQPCQHGGTCRGYMGGYVCECPAGYAGDSCEDNIDECAS-QPCQNGGSCIDLVA--- 1143
Query: 108 QHRFNCTCPSGYHGKICE 125
R+ C+CP G G +CE
Sbjct: 1144 --RYLCSCPPGTLGVLCE 1159
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Query: 49 PCAYSPCKHGSCVDKRAG--YFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDE 106
PCA SPC++G + + Y C C P + G+NC V + C G CLNGGTC VD
Sbjct: 201 PCAPSPCRNGGTCRQSSDVTYDCACLPGFEGQNCEVNVDDCPG-HRCLNGGTC----VDG 255
Query: 107 TQHRFNCTCPSGYHGKICEK 126
+ +NC CP + G+ C +
Sbjct: 256 V-NTYNCQCPPEWTGQFCTE 274
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 42/97 (43%), Gaps = 12/97 (12%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGC-VGPD-----TCLNGGTCKPY 102
CA PC++G SC+D A Y C CPP G C + C +GP CL+ GTC
Sbjct: 1127 CASQPCQNGGSCIDLVARYLCSCPPGTLGVLCEINEDDCDLGPSLDSGVQCLHNGTCVDL 1186
Query: 103 LVDETQHRFNCTCPSGYHGKICEKITTMSFSGGSHIM 139
+ F C CP GY G CE G H
Sbjct: 1187 V-----GGFRCNCPPGYTGLHCEADINECRPGACHAA 1218
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query: 58 GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPS 117
G C+DK ++C CP G +C E+ C C +GGTC+ Y+ + C CP+
Sbjct: 1060 GKCIDKGRSHYCVCPEGRTGSHCEHEVDPCTA-QPCQHGGTCRGYM-----GGYVCECPA 1113
Query: 118 GYHGKICE 125
GY G CE
Sbjct: 1114 GYAGDSCE 1121
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
Query: 50 CAYSPCK-HGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C PC+ +C+D+ + C C + G C V++ C C+NGG CK +
Sbjct: 436 CLSGPCRNQATCLDRIGQFTCICMAGFTGTYCEVDIDECQS-SPCVNGGVCK-----DRV 489
Query: 109 HRFNCTCPSGYHGKICE 125
+ F+CTCPSG+ G +C+
Sbjct: 490 NGFSCTCPSGFSGSMCQ 506
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 50 CAYSPCKHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQH 109
C+ PC HG CVD A + C C P Y G C ++ C C GG C LVD
Sbjct: 550 CSPDPCHHGRCVDGIASFSCACAPGYTGIRCESQVDECRS-QPCRYGGKCL-DLVD---- 603
Query: 110 RFNCTCPSGYHGKICE 125
++ C CP G G CE
Sbjct: 604 KYLCRCPPGTTGVNCE 619
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C SPC +G C D+ G+ C CP + G C +++ C C NG C VD+
Sbjct: 474 CQSSPCVNGGVCKDRVNGFSCTCPSGFSGSMCQLDVDECAS-TPCRNGAKC----VDQPD 528
Query: 109 HRFNCTCPSGYHGKICEK 126
+ C C G+ G +CE+
Sbjct: 529 G-YECRCAEGFEGTLCER 545
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 6/70 (8%)
Query: 58 GSCVDKRAGYFCDCPPTYGGKNCSVELTGC-VGPDTCLNGGTCKPYLVDETQHRFNCTCP 116
G+CVD Y C CPP + G+ C+ ++ C + P+ C NGGTC L + C C
Sbjct: 250 GTCVDGVNTYNCQCPPEWTGQFCTEDVDECQLQPNACHNGGTCFNLLGGHS-----CVCV 304
Query: 117 SGYHGKICEK 126
+G+ G+ C +
Sbjct: 305 NGWTGESCSQ 314
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Query: 55 CKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNC 113
C+HG +C++ + C CP Y G C + C P C NGGTC+ + ++C
Sbjct: 169 CRHGGTCLNTPGSFRCQCPLGYTGLLCENPVVPCA-PSPCRNGGTCR----QSSDVTYDC 223
Query: 114 TCPSGYHGKICE 125
C G+ G+ CE
Sbjct: 224 ACLPGFEGQNCE 235
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 50 CAYSPCKHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQH 109
CA +PC G C D Y C C P + G C+VE+ C C GG+C + ++
Sbjct: 625 CASNPCTFGVCRDGINRYDCVCQPGFTGPLCNVEINECAS-SPCGEGGSCV-----DGEN 678
Query: 110 RFNCTCPSGYHGKIC 124
F+C CP G +C
Sbjct: 679 GFHCLCPPGSLPPLC 693
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA +PC++G+ CVD+ GY C C + G C + C PD C +G VD
Sbjct: 512 CASTPCRNGAKCVDQPDGYECRCAEGFEGTLCERNVDDC-SPDPCHHG-----RCVDGIA 565
Query: 109 HRFNCTCPSGYHGKICEK 126
F+C C GY G CE
Sbjct: 566 S-FSCACAPGYTGIRCES 582
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 33/82 (40%), Gaps = 7/82 (8%)
Query: 47 LCPCAYSPCKHGSCVDKRAGYF--CDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLV 104
L PC S C+HG + C CPP + G C ++ C G C GTC
Sbjct: 773 LSPCTPSLCEHGGHCESDPDRLTVCSCPPGWQGPRCQQDVDECAGASPCGPHGTCT---- 828
Query: 105 DETQHRFNCTCPSGYHGKICEK 126
F C C GY G C++
Sbjct: 829 -NLPGNFRCICHRGYTGPFCDQ 849
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 57 HGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCP 116
+G+CVD G+ C+CPP Y G +C ++ C P C T + L D H F C C
Sbjct: 1180 NGTCVDLVGGFRCNCPPGYTGLHCEADINECR-PGACHAAHT-RDCLQDPGGH-FRCVCH 1236
Query: 117 SGYHGKICE 125
G+ G C+
Sbjct: 1237 PGFTGPRCQ 1245
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C PC++G C+D Y C CPP G NC V + C + C G + +
Sbjct: 587 CRSQPCRYGGKCLDLVDKYLCRCPPGTTGVNCEVNIDDCAS-NPCTFG------VCRDGI 639
Query: 109 HRFNCTCPSGYHGKIC 124
+R++C C G+ G +C
Sbjct: 640 NRYDCVCQPGFTGPLC 655
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 33/82 (40%), Gaps = 9/82 (10%)
Query: 45 YSLCPCAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYL 103
Y PC PC HG C G+ C C + G C + C C NGG C
Sbjct: 962 YEADPCFSRPCLHGGICNPTHPGFECTCREGFTGSQCQNPVDWCSQ-APCQNGGRC---- 1016
Query: 104 VDETQHRFNCTCPSGYHGKICE 125
Q C CP G+ G++C+
Sbjct: 1017 ---VQTGAYCICPPGWSGRLCD 1035
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Query: 53 SPC-KHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRF 111
SPC HG+C + + C C Y G C ++ C P+ CL+GG+C+ + F
Sbjct: 819 SPCGPHGTCTNLPGNFRCICHRGYTGPFCDQDIDDC-DPNPCLHGGSCQ-----DGVGSF 872
Query: 112 NCTCPSGYHGKICEK 126
+C+C G+ G C +
Sbjct: 873 SCSCLDGFAGPRCAR 887
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 17/86 (19%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDT---------CLNGGTC 99
C+ +PC++G CV + G +C CPP + G+ C ++ C C GG C
Sbjct: 1005 CSQAPCQNGGRCV--QTGAYCICPPGWSGRLCDIQSLPCTEAAAQMGVRLEQLCQEGGKC 1062
Query: 100 KPYLVDETQHRFNCTCPSGYHGKICE 125
+D+ + + C CP G G CE
Sbjct: 1063 ----IDKGRSHY-CVCPEGRTGSHCE 1083
Score = 33.5 bits (75), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 35/89 (39%), Gaps = 9/89 (10%)
Query: 50 CAYSPCKHGSCVDKR---AGYFCDCPPTYGGKNCSVELTGC-VGPDTCLNGGTCKPYLVD 105
C +PC + D C CPP + G C ++ C +G + C + G C
Sbjct: 356 CVSNPCHEDAICDTNPVSGRAICTCPPGFTGGACDQDVDECSIGANPCEHLGRCV----- 410
Query: 106 ETQHRFNCTCPSGYHGKICEKITTMSFSG 134
TQ F C C GY G CE SG
Sbjct: 411 NTQGSFLCQCGRGYTGPRCETDVNECLSG 439
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 30/78 (38%), Gaps = 10/78 (12%)
Query: 60 CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDT-------CLNGGTCKPYLVDETQHRFN 112
C G C CPP G +C V G CL+GG+C P ++ F
Sbjct: 1305 CQQTARGPRCACPPGLSGPSCRVSRASPSGATNASCASAPCLHGGSCLPV---QSVPFFR 1361
Query: 113 CTCPSGYHGKICEKITTM 130
C C G+ G CE +
Sbjct: 1362 CVCAPGWGGPRCETPSAA 1379
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA + C HG+ C D+ A ++C CP G C ++ CV + C C +
Sbjct: 319 CATAVCFHGATCHDRVASFYCACPMGKTGLLCHLD-DACVS-NPCHEDAICD---TNPVS 373
Query: 109 HRFNCTCPSGYHGKICEK 126
R CTCP G+ G C++
Sbjct: 374 GRAICTCPPGFTGGACDQ 391
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 2/70 (2%)
Query: 60 CVDKRAGYF-CDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSG 118
C+ G+F C C P + G C + L+ C C +GG C+ L F C C
Sbjct: 1223 CLQDPGGHFRCVCHPGFTGPRCQIALSPCES-QPCQHGGQCRHSLGRGGGLTFTCHCVPP 1281
Query: 119 YHGKICEKIT 128
+ G CE++
Sbjct: 1282 FWGLRCERVA 1291
Score = 30.0 bits (66), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 36/91 (39%), Gaps = 11/91 (12%)
Query: 49 PCAYSPCK-----HGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYL 103
PC PC S V A + C C + G +CS + CV C++G C
Sbjct: 82 PCHSGPCAGRGVCQSSVVAGTARFSCRCLRGFQGPDCS-QPDPCVS-RPCVHGAPCS--- 136
Query: 104 VDETQHRFNCTCPSGYHGKICEKITTMSFSG 134
RF C CP GY G+ C+ SG
Sbjct: 137 -VGPDGRFACACPPGYQGQSCQSDIDECRSG 166
>sp|Q91ZI0|CELR3_MOUSE Cadherin EGF LAG seven-pass G-type receptor 3 OS=Mus musculus
GN=Celsr3 PE=2 SV=2
Length = 3301
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/99 (33%), Positives = 45/99 (45%), Gaps = 9/99 (9%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C +PC++G +C + GY C C P + E CV P C NGGTC +
Sbjct: 1430 CYSNPCRNGGACARREGGYTCVCRPRFTDCELDTEAGRCV-PGVCRNGGTC----TNAPN 1484
Query: 109 HRFNCTCPSG--YHGKICEKITTMSFSGGSHIMLNTTRE 145
F C CP+G + G CE + SF S +M R+
Sbjct: 1485 GGFRCQCPAGGAFEGPRCE-VAARSFPPSSFVMFRGLRQ 1522
Score = 53.5 bits (127), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 32 MLKSDYRLIIRPLYSLC-PCAYSPCK-HGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVG 89
+L +R+ + P ++ PCA PC H C D + C C P Y G C + C+
Sbjct: 1920 LLPPSHRVNVEPGCTVTNPCASGPCPPHADCKDLWQTFSCTCRPGYYGPGC---VDACL- 1975
Query: 90 PDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICE 125
+ C N G+C+ + H + C C SGY G+ CE
Sbjct: 1976 LNPCQNQGSCRH--LQGAPHGYTCDCVSGYFGQHCE 2009
Score = 43.1 bits (100), Expect = 7e-04, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 50 CAYSPCKH-GSCVDKRAGYFCDCPPTYGGKNCSVEL 84
CA PCK+ G C ++ G+ CDCP +GGK+C + +
Sbjct: 1715 CASGPCKNNGFCSERWGGFSCDCPVGFGGKDCRLTM 1750
>sp|Q9IAT6|DLLC_DANRE Delta-like protein C OS=Danio rerio GN=dlc PE=2 SV=1
Length = 664
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 44/79 (55%), Gaps = 8/79 (10%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCV-GPDTCLNGGTCKPYLVDET 107
C +PCK+G SC D+ Y C CP + GKNC V C GP C NGGTC +++
Sbjct: 309 CDSNPCKNGGSCNDQENDYTCTCPQGFYGKNCEVSAMTCADGP--CFNGGTC----MEKG 362
Query: 108 QHRFNCTCPSGYHGKICEK 126
++C CP GY G CEK
Sbjct: 363 SGSYSCRCPPGYMGSNCEK 381
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 9/98 (9%)
Query: 52 YSPCKH-GSCVDKRAG-YFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQH 109
+ PC++ +C + G Y C C P + GKNC +E C + C NGG+C ++ ++
Sbjct: 272 HKPCRNDATCTNTGQGSYTCICKPGFSGKNCEIETNEC-DSNPCKNGGSC-----NDQEN 325
Query: 110 RFNCTCPSGYHGKICEKITTMSFSGGSHIMLNTTREEG 147
+ CTCP G++GK CE ++ M+ + G T E+G
Sbjct: 326 DYTCTCPQGFYGKNCE-VSAMTCADGPCFNGGTCMEKG 362
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 50 CAYSPC-KHGSCVDKRAG-YFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDET 107
CA PC G+C++K +G Y C CPP Y G NC ++ C D C NGG C +
Sbjct: 347 CADGPCFNGGTCMEKGSGSYSCRCPPGYMGSNCEKKIDRCSS-DPCANGGQCL-----DL 400
Query: 108 QHRFNCTCPSGYHGKICE 125
++ C C G+ G CE
Sbjct: 401 GNKATCRCRPGFTGSRCE 418
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 50 CAYSPCKH-GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C+ +PC++ G+CVD GY C C + GK+C V C C NGGTC +
Sbjct: 424 CSSNPCQNAGTCVDGINGYTCTCTLGFSGKDCRVRSDACSFM-PCQNGGTCYTHFSGPV- 481
Query: 109 HRFNCTCPSGYHGKICE 125
C CP+G+ G CE
Sbjct: 482 ----CQCPAGFMGTQCE 494
Score = 36.2 bits (82), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 7/71 (9%)
Query: 55 CKHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCT 114
C HG+C + C C +GG C+ +L C C N TC + Q + C
Sbjct: 240 CLHGTC---NQPFQCTCKEGWGGLFCNEDLNFCTNHKPCRNDATC----TNTGQGSYTCI 292
Query: 115 CPSGYHGKICE 125
C G+ GK CE
Sbjct: 293 CKPGFSGKNCE 303
Score = 35.8 bits (81), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C+ PC +G C+D C C P + G C + C + C N GTC VD
Sbjct: 386 CSSDPCANGGQCLDLGNKATCRCRPGFTGSRCETNIDDCSS-NPCQNAGTC----VDGI- 439
Query: 109 HRFNCTCPSGYHGKICE 125
+ + CTC G+ GK C
Sbjct: 440 NGYTCTCTLGFSGKDCR 456
>sp|P10079|FBP1_STRPU Fibropellin-1 OS=Strongylocentrotus purpuratus GN=EGF1 PE=1 SV=2
Length = 1064
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 41 IRPLYSLCPCAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTC 99
+R ++ CA +PC++G CVD GY C+C P Y G NC E+ C CLNGG C
Sbjct: 703 VRCQINIDECASAPCQNGGVCVDGVNGYVCNCAPGYTGDNCETEIDECASM-PCLNGGAC 761
Query: 100 KPYLVDETQHRFNCTCPSGYHGKICE 125
E + + C C +GY G ICE
Sbjct: 762 I-----EMVNGYTCQCVAGYTGVICE 782
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA +PC++G C D GY C C P + G NC + C D CLNGG C +
Sbjct: 788 CASAPCQNGGVCTDTINGYICACVPGFTGSNCETNIDECA-SDPCLNGGICV-----DGV 841
Query: 109 HRFNCTCPSGYHGKICE 125
+ F C CP Y G CE
Sbjct: 842 NGFVCQCPPNYSGTYCE 858
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA PC++G +CVD GY C+C P + G C + C CLNGG C +
Sbjct: 218 CASDPCQNGGACVDGVNGYVCNCVPGFDGDECENNINECA-SSPCLNGGICV-----DGV 271
Query: 109 HRFNCTCPSGYHGKICE 125
+ F CTC +G+ G CE
Sbjct: 272 NMFECTCLAGFTGVRCE 288
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA +PC++G C+D GY CDC P Y G +C ++ C P C NGG C +
Sbjct: 370 CASAPCQNGGVCIDGVNGYMCDCQPGYTGTHCETDIDECARP-PCQNGGDCV-----DGV 423
Query: 109 HRFNCTCPSGYHGKICEK 126
+ + C C G+ G CE
Sbjct: 424 NGYVCICAPGFDGLNCEN 441
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA PC +G CVD G+ C CPP Y G C + L C C NG TC D
Sbjct: 826 CASDPCLNGGICVDGVNGFVCQCPPNYSGTYCEISLDACRSM-PCQNGATCVNVGAD--- 881
Query: 109 HRFNCTCPSGYHGKICE 125
+ C C GY G+ CE
Sbjct: 882 --YVCECVPGYAGQNCE 896
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 46 SLCPCAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLV 104
SL C PC++G+ CV+ A Y C+C P Y G+NC +++ C C NGG C +
Sbjct: 860 SLDACRSMPCQNGATCVNVGADYVCECVPGYAGQNCEIDINECASL-PCQNGGLCIDGIA 918
Query: 105 DETQHRFNCTCPSGYHGKICEKITTMSFSG 134
+ C C GY G CE++ G
Sbjct: 919 -----GYTCQCRLGYIGVNCEEVGFCDLEG 943
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA PC++G CVD GY C C P + G NC + C C NG C +
Sbjct: 408 CARPPCQNGGDCVDGVNGYVCICAPGFDGLNCENNIDECA-SRPCQNGAVCV-----DGV 461
Query: 109 HRFNCTCPSGYHGKICE 125
+ F CTC +GY G +CE
Sbjct: 462 NGFVCTCSAGYTGVLCE 478
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA PC++G+ CVD G+ C C Y G C ++ C CLNGG C +
Sbjct: 446 CASRPCQNGAVCVDGVNGFVCTCSAGYTGVLCETDINECASM-PCLNGGVCTDLV----- 499
Query: 109 HRFNCTCPSGYHGKICEKIT 128
+ + CTC +G+ G CE T
Sbjct: 500 NGYICTCAAGFEGTNCETDT 519
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 41 IRPLYSLCPCAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTC 99
+R ++ CA +PC++G C+D GY C CP + G NC C CLNGGTC
Sbjct: 285 VRCEVNIDECASAPCQNGGICIDGINGYTCSCPLGFSGDNCENNDDECSSI-PCLNGGTC 343
Query: 100 KPYLVDETQHRFNCTCPSGYHGKIC 124
+ + + C C G+ G C
Sbjct: 344 VDLV-----NAYMCVCAPGWTGPTC 363
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 55 CKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNC 113
C++G+ C D Y C CPP + G+NC +++ C D C NGG C + + + C
Sbjct: 185 CQNGAACTDLVNDYACTCPPGFTGRNCEIDIDECA-SDPCQNGGACV-----DGVNGYVC 238
Query: 114 TCPSGYHGKICEK 126
C G+ G CE
Sbjct: 239 NCVPGFDGDECEN 251
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 7/77 (9%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA SPC +G CVD+ Y C C P + G +C E+ C CLNGG C +
Sbjct: 636 CASSPCMNGGLCVDQVNSYVCFCLPGFTGIHCGTEIDECA-SSPCLNGGQCIDRV----- 689
Query: 109 HRFNCTCPSGYHGKICE 125
+ C C +GY C+
Sbjct: 690 DSYECVCAAGYTAVRCQ 706
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA PC +G C D GY C C + G NC + C C NG TC +
Sbjct: 484 CASMPCLNGGVCTDLVNGYICTCAAGFEGTNCETDTDECASF-PCQNGATCTDQV----- 537
Query: 109 HRFNCTCPSGYHGKICE 125
+ + CTC GY G +CE
Sbjct: 538 NGYVCTCVPGYTGVLCE 554
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA PC++G+ C D+ GY C C P Y G C ++ C CLNGGTC +
Sbjct: 522 CASFPCQNGATCTDQVNGYVCTCVPGYTGVLCETDINECASF-PCLNGGTCNDQV----- 575
Query: 109 HRFNCTCPSGYHGKICE 125
+ + C C CE
Sbjct: 576 NGYVCVCAQDTSVSTCE 592
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA +PC +G +C+D G+ C C P + G NC + C C+NGG C VD+
Sbjct: 598 CASAPCLNGGACMDVVNGFVCTCLPGWEGTNCEINTDECA-SSPCMNGGLC----VDQV- 651
Query: 109 HRFNCTCPSGYHGKIC 124
+ + C C G+ G C
Sbjct: 652 NSYVCFCLPGFTGIHC 667
Score = 37.0 bits (84), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA PC +G +C++ GY C C Y G C ++ C C NGG C +T
Sbjct: 750 CASMPCLNGGACIEMVNGYTCQCVAGYTGVICETDIDECASA-PCQNGGVCT-----DTI 803
Query: 109 HRFNCTCPSGYHGKICE 125
+ + C C G+ G CE
Sbjct: 804 NGYICACVPGFTGSNCE 820
Score = 36.6 bits (83), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 34/77 (44%), Gaps = 7/77 (9%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA PC +G +C D+ GY C C C + C CLNGG C +
Sbjct: 560 CASFPCLNGGTCNDQVNGYVCVCAQDTSVSTCETDRDECASA-PCLNGGACMDVV----- 613
Query: 109 HRFNCTCPSGYHGKICE 125
+ F CTC G+ G CE
Sbjct: 614 NGFVCTCLPGWEGTNCE 630
Score = 35.8 bits (81), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C+ PC +G +CVD Y C C P + G C+ + C C NGG C +
Sbjct: 332 CSSIPCLNGGTCVDLVNAYMCVCAPGWTGPTCADNIDECASA-PCQNGGVCI-----DGV 385
Query: 109 HRFNCTCPSGYHGKICE 125
+ + C C GY G CE
Sbjct: 386 NGYMCDCQPGYTGTHCE 402
Score = 32.7 bits (73), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 6/56 (10%)
Query: 27 VLNVIMLKSDYRLIIRPLYSLCPCAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCS 81
+L V++L +I Y C PC++GS C + Y C CP Y G+NC
Sbjct: 5 LLAVLLLS-----VIAVTYGQGECDSDPCENGSTCQEGEGSYICQCPMGYDGQNCD 55
Score = 30.4 bits (67), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 5/38 (13%)
Query: 91 DTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICEKIT 128
D C NG TC+ E + + C CP GY G+ C++ T
Sbjct: 26 DPCENGSTCQ-----EGEGSYICQCPMGYDGQNCDRFT 58
>sp|O88277|FAT2_RAT Protocadherin Fat 2 OS=Rattus norvegicus GN=Fat2 PE=1 SV=1
Length = 4351
Score = 57.4 bits (137), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/100 (34%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
Query: 50 CAYSPCKHG-SCVDKR-AGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDET 107
C+ SPC +G SC +GY C CPP + G+NC + C C GGTC +
Sbjct: 3953 CSQSPCLNGGSCSPALGSGYLCRCPPPFSGRNCELGRENCTSA-PCQEGGTCV-----SS 4006
Query: 108 QHRFNCTCPSGYHGKICEKITTMSFSGGSHIMLNTTREEG 147
+C CP Y G CE + SGG H ++ + G
Sbjct: 4007 PEGTSCNCPHPYTGDRCE-MEARGCSGG-HCLITPEIKRG 4044
>sp|Q9R172|NOTC3_RAT Neurogenic locus notch homolog protein 3 OS=Rattus norvegicus
GN=Notch3 PE=2 SV=2
Length = 2319
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Query: 50 CAYSPCKHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQH 109
C SPC G+C D A + C CPP YGG +C +L C P +C NGGTC VD +
Sbjct: 893 CLSSPCGPGTCTDHVASFTCTCPPGYGGFHCETDLLDC-SPSSCFNGGTC----VDGV-N 946
Query: 110 RFNCTCPSGYHGKICEKITTMSFS 133
F+C C GY G C+ FS
Sbjct: 947 SFSCLCRPGYTGTHCQYKVDPCFS 970
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 49 PCAYSPCKHGS--CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDE 106
PC SPC HG+ V Y C CPP Y G+NC ++ C +C +GGTC
Sbjct: 124 PCFSSPCAHGAPCSVGSDGRYACACPPGYQGRNCRSDIDECRAGASCRHGGTCI-----N 178
Query: 107 TQHRFNCTCPSGYHGKICEK 126
T F+C CP GY G +CE
Sbjct: 179 TPGSFHCLCPLGYTGLLCEN 198
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 43/90 (47%), Gaps = 14/90 (15%)
Query: 49 PCAYSPCKHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLN-----GGTCKPYL 103
PCA+ PC HG C D G+ C C P + G CS L PD C + GGTC
Sbjct: 700 PCAHKPCSHGVCHDAPGGFQCVCDPGWSGPRCSQSLA----PDACESQPCQAGGTCTSDG 755
Query: 104 VDETQHRFNCTCPSGYHGKICEKITTMSFS 133
+ F+CTC G+ G CE ++ + S
Sbjct: 756 IG-----FHCTCAPGFQGHQCEVLSPCTPS 780
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Query: 49 PCAYSPCKHGSCVDKRAG--YFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDE 106
PCA SPC++G + + Y C C P + G+NC V + C G CLNGGTC VD
Sbjct: 202 PCAPSPCRNGGTCRQSSDVTYDCACLPGFEGQNCEVNVDDCPG-HRCLNGGTC----VDG 256
Query: 107 TQHRFNCTCPSGYHGKICEK 126
+ +NC CP + G+ C +
Sbjct: 257 V-NTYNCQCPPEWTGQFCTE 275
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 49 PCAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDET 107
PC PC+HG +C GY C+CP Y G +C ++ C C NGG+C +D
Sbjct: 1089 PCTAQPCQHGGTCRGYMGGYVCECPTGYSGDSCEDDVDECAS-QPCQNGGSC----IDLV 1143
Query: 108 QHRFNCTCPSGYHGKICE 125
H + C+CP G G +CE
Sbjct: 1144 AH-YLCSCPPGTLGVLCE 1160
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 6/68 (8%)
Query: 58 GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPS 117
G C+DK ++C CP G +C E+ C C +GGTC+ Y+ + C CP+
Sbjct: 1061 GQCIDKDHSHYCVCPEGRMGSHCEQEVDPCTA-QPCQHGGTCRGYMGG-----YVCECPT 1114
Query: 118 GYHGKICE 125
GY G CE
Sbjct: 1115 GYSGDSCE 1122
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 41/97 (42%), Gaps = 12/97 (12%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGC-VGPD-----TCLNGGTCKPY 102
CA PC++G SC+D A Y C CPP G C + C GP CL+ GTC
Sbjct: 1128 CASQPCQNGGSCIDLVAHYLCSCPPGTLGVLCEINEDDCGPGPSLDSGLRCLHNGTCVDL 1187
Query: 103 LVDETQHRFNCTCPSGYHGKICEKITTMSFSGGSHIM 139
+ F C CP GY G CE G H
Sbjct: 1188 VGG-----FRCNCPPGYTGLHCEADINECRPGTCHAA 1219
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 50 CAYSPCKHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQH 109
C+ PC HG CVD A + C C P Y G C ++ C C GG C LVD
Sbjct: 551 CSPDPCHHGRCVDGIASFSCACAPGYTGIRCESQVDECRS-QPCRYGGKCL-DLVD---- 604
Query: 110 RFNCTCPSGYHGKICE 125
++ C CP G G CE
Sbjct: 605 KYLCRCPPGTTGVNCE 620
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 50 CAYSPCK-HGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C PC+ +C+D+ + C C + G C V++ C C+NGG CK +
Sbjct: 437 CLSGPCRNQATCLDRIGQFTCICMAGFTGTFCEVDIDECQS-SPCVNGGVCK-----DRV 490
Query: 109 HRFNCTCPSGYHGKICE 125
+ F+CTCPSG+ G C+
Sbjct: 491 NGFSCTCPSGFSGSTCQ 507
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C SPC +G C D+ G+ C CP + G C +++ C C NG C VD+
Sbjct: 475 CQSSPCVNGGVCKDRVNGFSCTCPSGFSGSTCQLDVDECAS-TPCRNGAKC----VDQPD 529
Query: 109 HRFNCTCPSGYHGKICEK 126
+ C C G+ G +CE+
Sbjct: 530 G-YECRCAEGFEGTLCER 546
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 6/70 (8%)
Query: 58 GSCVDKRAGYFCDCPPTYGGKNCSVELTGC-VGPDTCLNGGTCKPYLVDETQHRFNCTCP 116
G+CVD Y C CPP + G+ C+ ++ C + P+ C NGGTC L + C C
Sbjct: 251 GTCVDGVNTYNCQCPPEWTGQFCTEDVDECQLQPNACHNGGTCFNLLGGHS-----CVCV 305
Query: 117 SGYHGKICEK 126
+G+ G+ C +
Sbjct: 306 NGWTGESCSQ 315
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 51 AYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQH 109
A + C+HG +C++ + C CP Y G C + C P C NGGTC+ +
Sbjct: 166 AGASCRHGGTCINTPGSFHCLCPLGYTGLLCENPIVPCA-PSPCRNGGTCR----QSSDV 220
Query: 110 RFNCTCPSGYHGKICE 125
++C C G+ G+ CE
Sbjct: 221 TYDCACLPGFEGQNCE 236
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 57 HGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCP 116
+G+CVD G+ C+CPP Y G +C ++ C P TC T + L D H F C C
Sbjct: 1181 NGTCVDLVGGFRCNCPPGYTGLHCEADINECR-PGTCHAAHT-RDCLQDPGGH-FRCICL 1237
Query: 117 SGYHGKICE 125
G+ G C+
Sbjct: 1238 PGFTGPRCQ 1246
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 50 CAYSPCKHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQH 109
CA +PC G C D Y C C P + G C+VE+ C C GG+C + ++
Sbjct: 626 CASNPCTFGVCRDGINRYDCVCQPGFTGPLCNVEINECAS-SPCGEGGSCV-----DGEN 679
Query: 110 RFNCTCPSGYHGKIC 124
F+C CP G +C
Sbjct: 680 GFHCLCPPGSLPPLC 694
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 53 SPC-KHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRF 111
SPC HG+C + + C C Y G C ++ C P+ CLNGG+C+ + F
Sbjct: 820 SPCGPHGTCTNLPGSFRCICHGGYTGPFCDQDIDDC-DPNPCLNGGSCQ-----DGVGSF 873
Query: 112 NCTCPSGYHGKICEK 126
+C+C SG+ G C +
Sbjct: 874 SCSCLSGFAGPRCAR 888
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 33/82 (40%), Gaps = 7/82 (8%)
Query: 47 LCPCAYSPCKHGSCVDKRAGYF--CDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLV 104
L PC S C+HG + C CPP + G C ++ C G C GTC
Sbjct: 774 LSPCTPSLCEHGGHCESDPDQLTVCSCPPGWQGPRCQQDVDECAGASPCGPHGTCT---- 829
Query: 105 DETQHRFNCTCPSGYHGKICEK 126
F C C GY G C++
Sbjct: 830 -NLPGSFRCICHGGYTGPFCDQ 850
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA +PC++G+ CVD+ GY C C + G C + C PD C +G VD
Sbjct: 513 CASTPCRNGAKCVDQPDGYECRCAEGFEGTLCERNVDDC-SPDPCHHG-----RCVDGIA 566
Query: 109 HRFNCTCPSGYHGKICEK 126
F+C C GY G CE
Sbjct: 567 -SFSCACAPGYTGIRCES 583
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C PC++G C+D Y C CPP G NC V + C + C G + +
Sbjct: 588 CRSQPCRYGGKCLDLVDKYLCRCPPGTTGVNCEVNIDDCAS-NPCTFG------VCRDGI 640
Query: 109 HRFNCTCPSGYHGKIC 124
+R++C C G+ G +C
Sbjct: 641 NRYDCVCQPGFTGPLC 656
Score = 37.0 bits (84), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 9/75 (12%)
Query: 53 SPCKH-GSCVDKRAGYFCDCPPTYGGKNCSVELTGCV-GPDTCLNGGTCKPYLVDETQHR 110
+PC+H G CV+ + + C C Y G C ++ C+ GP C N TC + +
Sbjct: 402 NPCEHLGRCVNTQGSFLCQCGRGYTGPRCETDVNECLSGP--CRNQATCLDRI-----GQ 454
Query: 111 FNCTCPSGYHGKICE 125
F C C +G+ G CE
Sbjct: 455 FTCICMAGFTGTFCE 469
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 8/77 (10%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C +PC +G SC D + C C + G C+ ++ D CL+ C P +
Sbjct: 855 CDPNPCLNGGSCQDGVGSFSCSCLSGFAGPRCARDV------DECLS-SPCGPGTCTDHV 907
Query: 109 HRFNCTCPSGYHGKICE 125
F CTCP GY G CE
Sbjct: 908 ASFTCTCPPGYGGFHCE 924
Score = 34.7 bits (78), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 17/87 (19%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDT---------CLNGGTC 99
C+ +PC++G CV + G +C CPP + G C + C C GG C
Sbjct: 1006 CSQAPCQNGGRCV--QTGAYCICPPEWSGPLCDIPSLPCTEAAAHMGVRLEQLCQAGGQC 1063
Query: 100 KPYLVDETQHRFNCTCPSGYHGKICEK 126
+ H C CP G G CE+
Sbjct: 1064 I-----DKDHSHYCVCPEGRMGSHCEQ 1085
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 37/95 (38%), Gaps = 9/95 (9%)
Query: 45 YSLCPCAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYL 103
Y + PC PC HG C +G+ C C + G C + C C NGG C
Sbjct: 963 YKVDPCFSRPCLHGGICNPTHSGFECTCREGFTGNQCQNPVDWCSQ-APCQNGGRC---- 1017
Query: 104 VDETQHRFNCTCPSGYHGKICEKITTMSFSGGSHI 138
Q C CP + G +C+ + +H+
Sbjct: 1018 ---VQTGAYCICPPEWSGPLCDIPSLPCTEAAAHM 1049
Score = 33.9 bits (76), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 35/89 (39%), Gaps = 9/89 (10%)
Query: 50 CAYSPCKHGSCVDKR---AGYFCDCPPTYGGKNCSVELTGC-VGPDTCLNGGTCKPYLVD 105
C +PC + D C CPP + G C ++ C +G + C + G C
Sbjct: 357 CVSNPCHEDAICDTNPVSGRAICTCPPGFTGGACDQDVDECSIGANPCEHLGRCV----- 411
Query: 106 ETQHRFNCTCPSGYHGKICEKITTMSFSG 134
TQ F C C GY G CE SG
Sbjct: 412 NTQGSFLCQCGRGYTGPRCETDVNECLSG 440
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 30/78 (38%), Gaps = 10/78 (12%)
Query: 60 CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDT-------CLNGGTCKPYLVDETQHRFN 112
C G C CPP G +C V G CL+GG+C P ++ F
Sbjct: 1306 CQQTARGPRCACPPGLSGPSCRVSRASPSGATNTSCAATPCLHGGSCLPV---QSVPFFR 1362
Query: 113 CTCPSGYHGKICEKITTM 130
C C G+ G CE +
Sbjct: 1363 CVCAPGWGGPRCETPSAA 1380
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA + C HG+ C D+ A ++C CP G C ++ CV + C C +
Sbjct: 320 CATAVCFHGATCHDRVASFYCACPMGKTGLLCHLD-DACVS-NPCHEDAICD---TNPVS 374
Query: 109 HRFNCTCPSGYHGKICEK 126
R CTCP G+ G C++
Sbjct: 375 GRAICTCPPGFTGGACDQ 392
>sp|O75094|SLIT3_HUMAN Slit homolog 3 protein OS=Homo sapiens GN=SLIT3 PE=2 SV=3
Length = 1523
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 5/78 (6%)
Query: 50 CAYSPCKH-GSCV-DKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDET 107
C SPCK+ G+C D Y C CP +Y GK+C+V + C+ + C +GGTC +L D
Sbjct: 920 CLSSPCKNNGTCTQDPVELYRCACPYSYKGKDCTVPINTCIQ-NPCQHGGTC--HLSDSH 976
Query: 108 QHRFNCTCPSGYHGKICE 125
+ F+C+CP G+ G+ CE
Sbjct: 977 KDGFSCSCPLGFEGQRCE 994
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 15/104 (14%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCS-------VELTGCVGPDTCLNGGTCKP 101
C C+HG+ CVD GY C CP + G C ++ + C + C NG C
Sbjct: 1078 CVAHKCRHGAQCVDTINGYTCTCPQGFSGPFCEHPPPMVLLQTSPCDQYE-CQNGAQC-- 1134
Query: 102 YLVDETQHRFNCTCPSGYHGKICEKITTMSFSG-GSHIMLNTTR 144
+V Q C CP G+ G CEK+ T++F G S++ L + +
Sbjct: 1135 -IV--VQQEPTCRCPPGFAGPRCEKLITVNFVGKDSYVELASAK 1175
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Query: 55 CKH-GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNC 113
C+H C+ G+ C+C P Y GK C + CV C +G C +T + + C
Sbjct: 1045 CQHEAKCIPLDKGFSCECVPGYSGKLCETDNDDCVA-HKCRHGAQCV-----DTINGYTC 1098
Query: 114 TCPSGYHGKICEKITTM 130
TCP G+ G CE M
Sbjct: 1099 TCPQGFSGPFCEHPPPM 1115
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
Query: 57 HGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGP-DTCLNGGTCKPYLVDETQHRFNCTC 115
+ +CVD Y C CPP Y G+ C + CV + C + C P F+C C
Sbjct: 1008 NATCVDGINNYVCICPPNYTGELCDEVIDHCVPELNLCQHEAKCIPL-----DKGFSCEC 1062
Query: 116 PSGYHGKICE 125
GY GK+CE
Sbjct: 1063 VPGYSGKLCE 1072
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 10/82 (12%)
Query: 50 CAYSPCKHGSCV----DKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVD 105
C +PC+HG + G+ C CP + G+ C + C D C N TC VD
Sbjct: 959 CIQNPCQHGGTCHLSDSHKDGFSCSCPLGFEGQRCEINPDDCEDND-CENNATC----VD 1013
Query: 106 ETQHRFNCTCPSGYHGKICEKI 127
+ + C CP Y G++C+++
Sbjct: 1014 GINN-YVCICPPNYTGELCDEV 1034
Score = 30.0 bits (66), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 14/32 (43%)
Query: 49 PCAYSPCKHGSCVDKRAGYFCDCPPTYGGKNC 80
PC C HG CV Y C C YGG C
Sbjct: 1371 PCLGHRCHHGKCVATGTSYMCKCAEGYGGDLC 1402
>sp|E9Q7X6|HEG1_MOUSE Protein HEG homolog 1 OS=Mus musculus GN=Heg1 PE=1 SV=1
Length = 1337
Score = 56.6 bits (135), Expect = 6e-08, Method: Composition-based stats.
Identities = 39/109 (35%), Positives = 50/109 (45%), Gaps = 12/109 (11%)
Query: 43 PLYSLCPCAYSPCKH-GSCVDKRAG--YFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTC 99
PL + C +PC H G C+ G Y C CPP + G+NCSV++ C+ C TC
Sbjct: 938 PLTPVNSCTVNPCLHDGKCIVDLTGRGYRCVCPPAWQGENCSVDVNECLS-SPCPPLATC 996
Query: 100 KPYLVDETQHRFNCTCPSGYHGK--ICEKITTMSFSGG-SHIMLNTTRE 145
+ TQ F C CP GY + IC + T LNTT E
Sbjct: 997 -----NNTQGSFTCRCPVGYQLEKGICNLVRTFVTEFKLKKTFLNTTAE 1040
>sp|Q5F226|FAT2_MOUSE Protocadherin Fat 2 OS=Mus musculus GN=Fat2 PE=2 SV=1
Length = 4351
Score = 56.6 bits (135), Expect = 6e-08, Method: Composition-based stats.
Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 10/100 (10%)
Query: 50 CAYSPCKHG-SCVDKR-AGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDET 107
C+ +PC +G SC +GY C CPP + G+NC + C C GGTC +
Sbjct: 3953 CSQNPCLNGGSCSPALGSGYLCRCPPLFSGRNCELGRENCTSA-PCQEGGTCV-----SS 4006
Query: 108 QHRFNCTCPSGYHGKICEKITTMSFSGGSHIMLNTTREEG 147
+C+CP Y G CE + SGG H ++ + G
Sbjct: 4007 PEGTSCSCPHPYTGDRCE-MEARGCSGG-HCLITPEIKRG 4044
>sp|P49013|FBP3_STRPU Fibropellin-3 OS=Strongylocentrotus purpuratus GN=EGF3 PE=1 SV=1
Length = 570
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 53/99 (53%), Gaps = 14/99 (14%)
Query: 35 SDYRLIIRPLYS-------LCPCAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTG 86
+DY+ I P ++ + CA +PC++G +CVD+ GY C+C P + G NC +
Sbjct: 196 NDYQCICAPGFTGDNCETDIDECASAPCRNGGACVDQVNGYTCNCIPGFNGVNCENNINE 255
Query: 87 CVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICE 125
C CLNGG C + ++F CTC GY G +CE
Sbjct: 256 CASI-PCLNGGICVDGI-----NQFACTCLPGYTGILCE 288
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 37/77 (48%), Gaps = 7/77 (9%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA SPC +G SC+D GY C C P Y G +C + L C C NGG C D
Sbjct: 332 CASSPCLNGGSCLDGVDGYVCQCLPNYTGTHCEISLDACASL-PCQNGGVCTNVGGD--- 387
Query: 109 HRFNCTCPSGYHGKICE 125
+ C C GY G CE
Sbjct: 388 --YVCECLPGYTGINCE 402
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Query: 46 SLCPCAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLV 104
SL CA PC++G C + Y C+C P Y G NC +++ C C NGG C +
Sbjct: 366 SLDACASLPCQNGGVCTNVGGDYVCECLPGYTGINCEIDINECASL-PCQNGGECINGIA 424
Query: 105 DETQHRFNCTCPSGYHGKICEKITTMSFSG 134
+ C C GY G CE++ G
Sbjct: 425 -----MYICQCRQGYAGVNCEEVGFCDLEG 449
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C +PC +G+ CVD+ Y C C P + G NC ++ C C NGG C VD+
Sbjct: 180 CTPNPCLNGATCVDQVNDYQCICAPGFTGDNCETDIDECASA-PCRNGGAC----VDQV- 233
Query: 109 HRFNCTCPSGYHGKICEK 126
+ + C C G++G CE
Sbjct: 234 NGYTCNCIPGFNGVNCEN 251
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA SPC++G SC D Y CDC + G NC + C CLNGG+C +
Sbjct: 294 CASSPCQNGGSCTDAVNRYTCDCRAGFTGSNCETNINECAS-SPCLNGGSCLDGV----- 347
Query: 109 HRFNCTCPSGYHGKICE 125
+ C C Y G CE
Sbjct: 348 DGYVCQCLPNYTGTHCE 364
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 7/77 (9%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA PC +G CVD + C C P Y G C ++ C C NGG+C +
Sbjct: 256 CASIPCLNGGICVDGINQFACTCLPGYTGILCETDINECAS-SPCQNGGSCT-----DAV 309
Query: 109 HRFNCTCPSGYHGKICE 125
+R+ C C +G+ G CE
Sbjct: 310 NRYTCDCRAGFTGSNCE 326
Score = 32.7 bits (73), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 40 IIRPLYSLCPCAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNC 80
I+ Y C +PC++GS C D Y C+C Y G+NC
Sbjct: 13 IVAATYGQGECGSNPCENGSVCRDGEGTYICECQMGYDGQNC 54
>sp|Q9WVB4|SLIT3_MOUSE Slit homolog 3 protein OS=Mus musculus GN=Slit3 PE=2 SV=2
Length = 1523
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 5/78 (6%)
Query: 50 CAYSPCKH-GSC-VDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDET 107
C SPCK+ G+C D Y C CP +Y GK+C+V + CV + C +GGTC +L +
Sbjct: 920 CLSSPCKNNGTCSQDPVEQYRCTCPYSYKGKDCTVPINTCVQ-NPCEHGGTC--HLSENL 976
Query: 108 QHRFNCTCPSGYHGKICE 125
+ F+C+CP G+ G+ CE
Sbjct: 977 RDGFSCSCPLGFEGQRCE 994
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 13/103 (12%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCS------VELTGCVGPDTCLNGGTCKPY 102
C C+HG+ CVD+ GY C CP + G C + T C NG C
Sbjct: 1078 CVAHKCRHGAQCVDEVNGYTCICPQGFSGLFCEHPPPMVLLQTSPCDQYECQNGAQC--- 1134
Query: 103 LVDETQHRFNCTCPSGYHGKICEKITTMSFSG-GSHIMLNTTR 144
+V Q C CP G+ G CEK+ T++F G S++ L + +
Sbjct: 1135 IV--VQQEPTCRCPPGFAGPRCEKLITVNFVGKDSYVELASAK 1175
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 10/82 (12%)
Query: 50 CAYSPCKHGS----CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVD 105
C +PC+HG + R G+ C CP + G+ C + C D C N TC VD
Sbjct: 959 CVQNPCEHGGTCHLSENLRDGFSCSCPLGFEGQRCEINPDDCEDND-CENSATC----VD 1013
Query: 106 ETQHRFNCTCPSGYHGKICEKI 127
+ + C CP Y G++C+++
Sbjct: 1014 GINN-YACLCPPNYTGELCDEV 1034
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 55 CKH-GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNC 113
C+H C+ G+ C+C P Y GK C CV C +G C VDE + + C
Sbjct: 1045 CQHEAKCISLDKGFRCECVPGYSGKLCETNNDDCVA-HKCRHGAQC----VDEV-NGYTC 1098
Query: 114 TCPSGYHGKICEKITTM 130
CP G+ G CE M
Sbjct: 1099 ICPQGFSGLFCEHPPPM 1115
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 58 GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPS 117
+CVD Y C CPP Y G+ C + CV P+ L K +D+ F C C
Sbjct: 1009 ATCVDGINNYACLCPPNYTGELCDEVIDYCV-PEMNLCQHEAKCISLDKG---FRCECVP 1064
Query: 118 GYHGKICE 125
GY GK+CE
Sbjct: 1065 GYSGKLCE 1072
Score = 30.4 bits (67), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 16/32 (50%)
Query: 49 PCAYSPCKHGSCVDKRAGYFCDCPPTYGGKNC 80
PC C+HG+C+ Y C C YGG C
Sbjct: 1371 PCLGHSCRHGTCMATGDSYVCKCAEGYGGALC 1402
>sp|O88280|SLIT3_RAT Slit homolog 3 protein OS=Rattus norvegicus GN=Slit3 PE=2 SV=1
Length = 1523
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 48/78 (61%), Gaps = 5/78 (6%)
Query: 50 CAYSPCKH-GSC-VDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDET 107
C SPCK+ G+C D Y C CP +Y GK+C+V + CV + C +GGTC +L +
Sbjct: 920 CLSSPCKNNGTCSQDPVEQYRCTCPYSYKGKDCTVPINTCVQ-NPCQHGGTC--HLSESH 976
Query: 108 QHRFNCTCPSGYHGKICE 125
+ F+C+CP G+ G+ CE
Sbjct: 977 RDGFSCSCPLGFEGQRCE 994
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 47/103 (45%), Gaps = 13/103 (12%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCS------VELTGCVGPDTCLNGGTCKPY 102
C C+HG+ CVD GY C CP + G C + T C NG C
Sbjct: 1078 CVAHKCRHGAQCVDAVNGYTCICPQGFSGLFCEHPPPMVLLQTSPCDQYECQNGAQC--- 1134
Query: 103 LVDETQHRFNCTCPSGYHGKICEKITTMSFSG-GSHIMLNTTR 144
+V Q C CP G+ G CEK+ T++F G S++ L + +
Sbjct: 1135 IV--VQQEPTCRCPPGFAGPRCEKLITVNFVGKDSYVELASAK 1175
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 10/82 (12%)
Query: 50 CAYSPCKHGS----CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVD 105
C +PC+HG R G+ C CP + G+ C + C D C N TC VD
Sbjct: 959 CVQNPCQHGGTCHLSESHRDGFSCSCPLGFEGQRCEINPDDCEDND-CENSATC----VD 1013
Query: 106 ETQHRFNCTCPSGYHGKICEKI 127
+ + C CP Y G++C+++
Sbjct: 1014 GINN-YACVCPPNYTGELCDEV 1034
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 55 CKH-GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNC 113
C+H C+ G+ C+C P Y GK C + CV C +G C VD + + C
Sbjct: 1045 CQHEAKCISLDKGFRCECVPGYSGKLCETDNDDCVA-HKCRHGAQC----VDAV-NGYTC 1098
Query: 114 TCPSGYHGKICEKITTM 130
CP G+ G CE M
Sbjct: 1099 ICPQGFSGLFCEHPPPM 1115
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Query: 50 CAYSPCKH-GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C + C++ +CVD Y C CPP Y G+ C + CV P+ L K +D+
Sbjct: 1000 CEDNDCENSATCVDGINNYACVCPPNYTGELCDEVIDYCV-PEMNLCQHEAKCISLDKG- 1057
Query: 109 HRFNCTCPSGYHGKICE 125
F C C GY GK+CE
Sbjct: 1058 --FRCECVPGYSGKLCE 1072
>sp|Q90Y54|JAG1B_DANRE Protein jagged-1b OS=Danio rerio GN=jag1b PE=2 SV=1
Length = 1213
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 8/78 (10%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C PC + SC + YFC+C P + G+NC + + C G CLNGGTCK +
Sbjct: 413 CEDKPCVNAKSCHNLIGAYFCECLPGWSGQNCDININDCKG--QCLNGGTCKDLV----- 465
Query: 109 HRFNCTCPSGYHGKICEK 126
+ + C CP GY G+ CEK
Sbjct: 466 NGYRCLCPPGYTGEQCEK 483
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
Query: 58 GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPS 117
G+C D GY C CPP Y G+ C ++ C CLNGG C+ DE + F C CP+
Sbjct: 459 GTCKDLVNGYRCLCPPGYTGEQCEKDVDECAS-SPCLNGGRCQ----DEV-NGFQCLCPA 512
Query: 118 GYHGKICE 125
G+ G++C+
Sbjct: 513 GFSGQLCQ 520
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 38/79 (48%), Gaps = 7/79 (8%)
Query: 55 CKHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCT 114
C HG+CV+ + C C +GG+ C +L C CLNGGTC D ++ C+
Sbjct: 268 CVHGTCVEP---WQCLCDTNWGGQLCDKDLNYCGTHQPCLNGGTCSNTGPD----KYQCS 320
Query: 115 CPSGYHGKICEKITTMSFS 133
C GY G CE+ S
Sbjct: 321 CEDGYSGVNCERAEHACLS 339
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 48/103 (46%), Gaps = 14/103 (13%)
Query: 33 LKSDYRLIIRPLYS-------LCPCAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVEL 84
L + YR + P Y+ + CA SPC +G C D+ G+ C CP + G+ C +++
Sbjct: 464 LVNGYRCLCPPGYTGEQCEKDVDECASSPCLNGGRCQDEVNGFQCLCPAGFSGQLCQLDI 523
Query: 85 TGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICEKI 127
C P+ C NG C D + C CP Y GK C +
Sbjct: 524 DYCK-PNPCQNGAQCFNLASD-----YFCKCPDDYEGKNCSHL 560
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C +PC +G +C + GY C C + G +C + + C P+ C +GGTC+ +
Sbjct: 337 CLSNPCANGGTCKETSQGYECHCAIGWSGTSCEINVDDCT-PNQCKHGGTCQDLV----- 390
Query: 109 HRFNCTCPSGYHGKICE 125
+ F C CP + GK C+
Sbjct: 391 NGFKCACPPHWTGKTCQ 407
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C +PC++G +C+DK Y C C + G +C + + C + CLN G C+ + D
Sbjct: 630 CESNPCRNGGTCIDKVNVYQCICADGWEGVHCEINIDDC-SLNPCLNKGACQDLVND--- 685
Query: 109 HRFNCTCPSGYHGKIC 124
F C C +G+ GK C
Sbjct: 686 --FYCECRNGWKGKTC 699
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 58 GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPS 117
G+C D+ + C C P + G C++ P+ C NGGTC +V+ FNC C
Sbjct: 715 GTCHDEGDTFKCRCSPGWEGATCNIAKNSSCLPNPCENGGTC---VVN--GDSFNCVCKE 769
Query: 118 GYHGKICEKITT 129
G+ G C + T
Sbjct: 770 GWEGSTCTENTN 781
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 7/98 (7%)
Query: 50 CAYSPC-KHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C PC G+CVD Y C+C P + G +C + + C C G TC VDE
Sbjct: 783 CNPHPCYNSGTCVDGENWYRCECAPGFAGPDCRININECQS-SPCAFGSTC----VDEI- 836
Query: 109 HRFNCTCPSGYHGKICEKITTMSFSGGSHIMLNTTREE 146
+ + C CP G G C+++ + + + E
Sbjct: 837 NGYRCLCPPGRIGPDCQEVVGRPCIANGQVTADGAKWE 874
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
Query: 50 CAYSPC-KHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C+ +PC G+C D ++C+C + GK C + C TC NGGTC +
Sbjct: 668 CSLNPCLNKGACQDLVNDFYCECRNGWKGKTCHSRDSQC-DEATCNNGGTCH-----DEG 721
Query: 109 HRFNCTCPSGYHGKIC 124
F C C G+ G C
Sbjct: 722 DTFKCRCSPGWEGATC 737
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 23/100 (23%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCS-----VELTGCVGPDTC---------- 93
C +PC++G+ C + + YFC CP Y GKNCS T C D+C
Sbjct: 526 CKPNPCQNGAQCFNLASDYFCKCPDDYEGKNCSHLKDHCRTTSCQVIDSCTVAVASNSTP 585
Query: 94 -----LNGGTCKPYLVDETQH--RFNCTCPSGYHGKICEK 126
++ C P+ +Q +F C C G+ G C +
Sbjct: 586 EGVRYISSNVCGPHGRCRSQAGGQFTCECQEGFRGTYCHE 625
Score = 37.0 bits (84), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 27/59 (45%), Gaps = 6/59 (10%)
Query: 67 YFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICE 125
Y C C Y G NC C+ + C NGGTCK ET + C C G+ G CE
Sbjct: 317 YQCSCEDGYSGVNCERAEHACLS-NPCANGGTCK-----ETSQGYECHCAIGWSGTSCE 369
Score = 33.1 bits (74), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 7/70 (10%)
Query: 57 HGSCVDKRAGYF-CDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTC 115
HG C + G F C+C + G C + C + C NGGTC +D+ + + C C
Sbjct: 599 HGRCRSQAGGQFTCECQEGFRGTYCHENINDCES-NPCRNGGTC----IDKV-NVYQCIC 652
Query: 116 PSGYHGKICE 125
G+ G CE
Sbjct: 653 ADGWEGVHCE 662
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 7/76 (9%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C +PC++G +CV + C C + G C+ C P C N GTC VD +
Sbjct: 745 CLPNPCENGGTCVVNGDSFNCVCKEGWEGSTCTENTNDC-NPHPCYNSGTC----VD-GE 798
Query: 109 HRFNCTCPSGYHGKIC 124
+ + C C G+ G C
Sbjct: 799 NWYRCECAPGFAGPDC 814
>sp|O35161|CELR1_MOUSE Cadherin EGF LAG seven-pass G-type receptor 1 OS=Mus musculus
GN=Celsr1 PE=2 SV=3
Length = 3034
Score = 56.2 bits (134), Expect = 8e-08, Method: Composition-based stats.
Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 8/99 (8%)
Query: 50 CAYSPC-KHGSCVDKRAGYFCDCPPTYGGKNCSVEL-TGCVGPDTCLNGGTCKPYLVDET 107
C +PC +G C + GY C+C + G++C V + +G C NGGTC L+
Sbjct: 1382 CYSNPCGANGRCRSREGGYTCECFEDFTGEHCQVNVRSGRCASGVCKNGGTCVNLLIGG- 1440
Query: 108 QHRFNCTCPSG-YHGKICEKITTMSFSGGSHIMLNTTRE 145
F+C CP G Y CE ++T SF S + R+
Sbjct: 1441 ---FHCVCPPGEYEHPYCE-VSTRSFPPQSFVTFRGLRQ 1475
Score = 43.5 bits (101), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 33/80 (41%), Gaps = 11/80 (13%)
Query: 49 PCAYSPCK-HGSCVDKRAGYFCDCPPTYGGKNC--SVELTGCVGPDTCLNGGTCKPYLVD 105
PCA SPC H C D Y C C Y GK C + L C C+
Sbjct: 1890 PCASSPCPPHSHCRDTWDSYSCICDRGYFGKKCVDACLLNPCKHVAACVRS--------P 1941
Query: 106 ETQHRFNCTCPSGYHGKICE 125
T ++C C G++G+ CE
Sbjct: 1942 NTPRGYSCECGPGHYGQYCE 1961
Score = 38.1 bits (87), Expect = 0.020, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNC 80
C + C++G +CV++ Y C+CP +GGKNC
Sbjct: 1668 CDGTSCQNGGTCVNRWNTYLCECPLRFGGKNC 1699
Score = 29.6 bits (65), Expect = 6.9, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 12/50 (24%)
Query: 80 CSVELTGCVGPDTCLNGGTCKPYLVDETQHRFN---CTCPSGYHGKICEK 126
C+ + C G +C NGGTC +R+N C CP + GK CE+
Sbjct: 1661 CASQRNFCDG-TSCQNGGTC--------VNRWNTYLCECPLRFGGKNCEQ 1701
>sp|Q9NYQ6|CELR1_HUMAN Cadherin EGF LAG seven-pass G-type receptor 1 OS=Homo sapiens
GN=CELSR1 PE=1 SV=1
Length = 3014
Score = 56.2 bits (134), Expect = 8e-08, Method: Composition-based stats.
Identities = 34/99 (34%), Positives = 47/99 (47%), Gaps = 8/99 (8%)
Query: 50 CAYSPC-KHGSCVDKRAGYFCDCPPTYGGKNCSVEL-TGCVGPDTCLNGGTCKPYLVDET 107
C PC +G C + GY C+C + G++C V+ +G C NGGTC L+
Sbjct: 1367 CYSDPCGANGRCRSREGGYTCECFEDFTGEHCEVDARSGRCANGVCKNGGTCVNLLIGG- 1425
Query: 108 QHRFNCTCPSG-YHGKICEKITTMSFSGGSHIMLNTTRE 145
F+C CP G Y CE +TT SF S + R+
Sbjct: 1426 ---FHCVCPPGEYERPYCE-VTTRSFPPQSFVTFRGLRQ 1460
Score = 36.2 bits (82), Expect = 0.077, Method: Composition-based stats.
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNC 80
C C++G +CV++ Y C+CP +GGKNC
Sbjct: 1653 CDGRRCQNGGTCVNRWNMYLCECPLRFGGKNC 1684
Score = 35.8 bits (81), Expect = 0.10, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 32/81 (39%), Gaps = 13/81 (16%)
Query: 49 PCAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNC--SVELTGCVGPDTCLNG-GTCKPYLV 104
PC SPC S C D Y C C Y G NC + L C C+ G+ + Y+
Sbjct: 1875 PCTSSPCPPNSRCHDAWEDYSCVCDKGYLGINCVDACHLNPCENMGACVRSPGSPQGYV- 1933
Query: 105 DETQHRFNCTCPSGYHGKICE 125
C C ++G CE
Sbjct: 1934 --------CECGPSHYGPYCE 1946
Score = 35.8 bits (81), Expect = 0.11, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 6/60 (10%)
Query: 66 GYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICE 125
G C CPP + G C E+ C D C G C+ + + C C + G+ CE
Sbjct: 1346 GLRCRCPPGFTGDYCETEIDLCYS-DPCGANGRCR-----SREGGYTCECFEDFTGEHCE 1399
Score = 31.2 bits (69), Expect = 2.6, Method: Composition-based stats.
Identities = 30/105 (28%), Positives = 44/105 (41%), Gaps = 21/105 (20%)
Query: 50 CAYSPCKH-GSCVDKRA---GYFCDCPPTYGGKNCSVELT-----GCVGPDTCLNGGTC- 99
C +PC++ G+CV GY C+C P++ G C +L G G C G C
Sbjct: 1911 CHLNPCENMGACVRSPGSPQGYVCECGPSHYGPYCENKLDLPCPRGWWGNPVC---GPCH 1967
Query: 100 ----KPYLVDETQHRFNCTCPSGYHGKICEKITTMS---FSGGSH 137
K + D + C C Y+ K+ + T + F GSH
Sbjct: 1968 CAVSKGFDPDCNKTNGQCQCKENYY-KLLAQDTCLPCDCFPHGSH 2011
>sp|Q90953|CSPG2_CHICK Versican core protein OS=Gallus gallus GN=VCAN PE=2 SV=1
Length = 3562
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 7/81 (8%)
Query: 49 PCAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDET 107
PC +PC +G +C + + Y C C P + G+ C +++ C + C NG TC L
Sbjct: 3257 PCKSNPCLNGGTCYPRGSFYICTCLPGFNGEQCELDIDECQS-NPCRNGATCIDGL---- 3311
Query: 108 QHRFNCTCPSGYHGKICEKIT 128
+ F C C Y G +CE+ T
Sbjct: 3312 -NTFTCLCLPSYIGALCEQDT 3331
Score = 33.1 bits (74), Expect = 0.61, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGC 87
C +PC++G +C+D + C C P+Y G C + C
Sbjct: 3296 CQSNPCRNGATCIDGLNTFTCLCLPSYIGALCEQDTETC 3334
>sp|P97677|DLL1_RAT Delta-like protein 1 OS=Rattus norvegicus GN=Dll1 PE=2 SV=1
Length = 714
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 51/86 (59%), Gaps = 9/86 (10%)
Query: 52 YSPCKHGS-CVDKRAG-YFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQH 109
+ PC++G+ C + G Y C C P Y G NC +E+ C P C NGG+C + +
Sbjct: 294 HKPCRNGATCTNTGQGSYTCSCRPGYTGANCELEVDECA-PSPCRNGGSCT-----DLED 347
Query: 110 RFNCTCPSGYHGKICEKITTMSFSGG 135
++CTCP G++GK+CE ++ M+ + G
Sbjct: 348 SYSCTCPPGFYGKVCE-LSAMTCADG 372
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCV-GPDTCLNGGTCKPYLVDET 107
CA SPC++G SC D Y C CPP + GK C + C GP C NGG C D
Sbjct: 331 CAPSPCRNGGSCTDLEDSYSCTCPPGFYGKVCELSAMTCADGP--CFNGGRCS----DNP 384
Query: 108 QHRFNCTCPSGYHGKICEK 126
+ C CP+G+ G CEK
Sbjct: 385 DGGYTCHCPAGFSGFNCEK 403
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C+ SPC +G+ CVD Y C C + G+ C + C C NGGTC+ + D
Sbjct: 408 CSSSPCSNGAKCVDLGNSYLCRCQTGFSGRYCEDNVDDCAS-SPCANGGTCRDSVND--- 463
Query: 109 HRFNCTCPSGYHGKIC 124
F+CTCP GY G+ C
Sbjct: 464 --FSCTCPPGYTGRNC 477
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA SPC +G +C D + C CPP Y G+NCS ++ C C NG TC +
Sbjct: 446 CASSPCANGGTCRDSVNDFSCTCPPGYTGRNCSAPVSRCEHA-PCHNGATCH-----QRG 499
Query: 109 HRFNCTCPSGYHGKICE 125
R+ C C GY G C+
Sbjct: 500 QRYMCECAQGYGGANCQ 516
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 7/74 (9%)
Query: 52 YSPCKHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRF 111
Y C HG+C + + C+C +GG C+ +L C C NG TC + Q +
Sbjct: 259 YPGCLHGTC---QQPWQCNCQEGWGGLFCNQDLNYCTHHKPCRNGATC----TNTGQGSY 311
Query: 112 NCTCPSGYHGKICE 125
C+C GY G CE
Sbjct: 312 TCSCRPGYTGANCE 325
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 8/78 (10%)
Query: 50 CAYSPC-KHGSCVDK-RAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDET 107
CA PC G C D GY C CP + G NC ++ C C NG C +
Sbjct: 369 CADGPCFNGGRCSDNPDGGYTCHCPAGFSGFNCEKKIDLCSS-SPCSNGAKCV-----DL 422
Query: 108 QHRFNCTCPSGYHGKICE 125
+ + C C +G+ G+ CE
Sbjct: 423 GNSYLCRCQTGFSGRYCE 440
>sp|P46530|NOTC1_DANRE Neurogenic locus notch homolog protein 1 OS=Danio rerio GN=notch1a
PE=2 SV=1
Length = 2437
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 50 CAYSPC-KHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA +PC GSC+D AG+ C+C Y G+ C L C P C NGG C+ E
Sbjct: 793 CASNPCLNQGSCIDDVAGFKCNCMLPYTGEVCENVLAPC-SPRPCKNGGVCR---ESEDF 848
Query: 109 HRFNCTCPSGYHGKICE 125
F+C CP+G+ G+ CE
Sbjct: 849 QSFSCNCPAGWQGQTCE 865
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 6/76 (7%)
Query: 50 CAYSPCKHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQH 109
CA SPC +G C D A + CDC P Y G+ C + C+ C NGGTC+ + ++
Sbjct: 568 CASSPCHYGVCRDGVASFTCDCRPGYTGRLCETNINECLS-QPCRNGGTCQ-----DREN 621
Query: 110 RFNCTCPSGYHGKICE 125
+ CTCP G G CE
Sbjct: 622 AYICTCPKGTTGVNCE 637
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 50 CAYSPCKHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQH 109
C+ +PC HGSC+D+ Y C C + G+NC + + C+ + C+NGGTCK +
Sbjct: 718 CSSNPCIHGSCLDQINSYRCVCEAGWMGRNCDININECLS-NPCVNGGTCK-----DMTS 771
Query: 110 RFNCTCPSGYHGKICE 125
+ CTC +G+ G C+
Sbjct: 772 GYLCTCRAGFSGPNCQ 787
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C +PC++G+ C D GY C+C P Y G NCS E+ C+ C NGGTC +
Sbjct: 1147 CQPNPCQNGATCTDYLGGYSCECVPGYHGMNCSKEINECLS-QPCQNGGTCIDLV----- 1200
Query: 109 HRFNCTCPSGYHGKICE 125
+ + C+CP G G CE
Sbjct: 1201 NTYKCSCPRGTQGVHCE 1217
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Query: 50 CAYSPCKHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQH 109
C PC +G C+DK GY C C P Y G C++ + C + C NGGTC +D +
Sbjct: 643 CKRKPCDYGKCIDKINGYECVCEPGYSGSMCNINIDDCA-LNPCHNGGTC----IDGV-N 696
Query: 110 RFNCTCPSGYHGKIC 124
F C CP G+ C
Sbjct: 697 SFTCLCPDGFRDATC 711
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 7/81 (8%)
Query: 49 PCAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGC-VGPDTCLNGGTCKPYLVDE 106
PCA +PC +G C + Y C CPP + G+ C ++ C V P C NGGTC ++E
Sbjct: 142 PCASNPCANGGQCSAFESHYICTCPPNFHGQTCRQDVNECAVSPSPCRNGGTC----INE 197
Query: 107 TQHRFNCTCPSGYHGKICEKI 127
+ C CP Y G C+++
Sbjct: 198 V-GSYLCRCPPEYTGPHCQRL 217
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 42 RPLYSLCPCAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCK 100
R + C + SPC++G +C+++ Y C CPP Y G +C C+ P C +GGTC
Sbjct: 175 RQDVNECAVSPSPCRNGGTCINEVGSYLCRCPPEYTGPHCQRLYQPCL-PSPCRSGGTC- 232
Query: 101 PYLVDETQHRFNCTCPSGYHGKICE 125
V + C+C G+ G+ CE
Sbjct: 233 ---VQTSDTTHTCSCLPGFTGQTCE 254
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 50 CAYSPCKHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQH 109
CA PC +G C+DK + C+CP + G C V++ C C NG C + +
Sbjct: 493 CASQPCLNGKCIDKINSFHCECPKGFSGSLCQVDVDECAS-TPCKNGAKCT-----DGPN 546
Query: 110 RFNCTCPSGYHGKICE 125
++ C C G+ G CE
Sbjct: 547 KYTCECTPGFSGIHCE 562
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 47 LCPCAYSPCKHGSCVDKR---AGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYL 103
L PC+ PCK+G + + C+CP + G+ C V++ CV + C NGG C
Sbjct: 828 LAPCSPRPCKNGGVCRESEDFQSFSCNCPAGWQGQTCEVDINECVR-NPCTNGGVC---- 882
Query: 104 VDETQHRFNCTCPSGYHGKICEK 126
+ + F C C G+ G +CE
Sbjct: 883 -ENLRGGFQCRCNPGFTGALCEN 904
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C +PC +G +C D +GY C C + G NC + + C + CLN G+C +D+
Sbjct: 755 CLSNPCVNGGTCKDMTSGYLCTCRAGFSGPNCQMNINECAS-NPCLNQGSC----IDDVA 809
Query: 109 HRFNCTCPSGYHGKICEKI 127
F C C Y G++CE +
Sbjct: 810 G-FKCNCMLPYTGEVCENV 827
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Query: 55 CKH-GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNC 113
C+H G CVD + C C Y G C ++ C P+ C NG TC YL ++C
Sbjct: 1114 CRHAGQCVDAGNTHLCRCQAGYTGSYCQEQVDECQ-PNPCQNGATCTDYL-----GGYSC 1167
Query: 114 TCPSGYHGKICEK 126
C GYHG C K
Sbjct: 1168 ECVPGYHGMNCSK 1180
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 51/111 (45%), Gaps = 12/111 (10%)
Query: 34 KSDYRLIIRPLYSLCPCAYSP-------CKHGS-CVDKRAGYFCDCPPTYGGKNCSVELT 85
K Y +P YS C Y C++G+ CV C C P + G C +
Sbjct: 1327 KHGYICKCQPGYSGSSCEYDSQSCGSLRCRNGATCVSGHLSPRCLCAPGFSGHECQTRMD 1386
Query: 86 GCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICEKITTMSFSGGS 136
+ C NGGTC+P + D +R C+CP+ ++G +C I SFSGG
Sbjct: 1387 SPCLVNPCYNGGTCQP-ISDAPFYR--CSCPANFNGLLCH-ILDYSFSGGQ 1433
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C +PC++G +C D Y C CP + G NC + C +C NGGTC VD
Sbjct: 947 CVSAPCRNGGNCTDCVNSYTCSCPAGFSGINCEINTPDCT-ESSCFNGGTC----VDGIS 1001
Query: 109 HRFNCTCPSGYHGKICE 125
F+C C G+ G C+
Sbjct: 1002 -SFSCVCLPGFTGNYCQ 1017
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 12/93 (12%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C +PC +G C D+ G+ C C + G+ C+ ++ CV C NGG C +
Sbjct: 909 CEPNPCSNGGVCQDRVNGFVCVCLAGFRGERCAEDIDECVSA-PCRNGGNCT-----DCV 962
Query: 109 HRFNCTCPSGYHGKICEKIT-----TMSFSGGS 136
+ + C+CP+G+ G CE T + F+GG+
Sbjct: 963 NSYTCSCPAGFSGINCEINTPDCTESSCFNGGT 995
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Query: 50 CAYSPCKHGSCVDKR---AGYFCDCPPTYGGKNCSVELTGC-VGPDTCLNGGTCKPYLVD 105
C +PC+ GS D C CPP Y G C+ ++ C +G + C +GG C
Sbjct: 375 CISNPCQKGSNCDTNPVSGKAICTCPPGYTGSACNQDIDECSLGANPCEHGGRCL----- 429
Query: 106 ETQHRFNCTCPSGYHGKICE 125
T+ F C C GY G CE
Sbjct: 430 NTKGSFQCKCLQGYEGPRCE 449
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 58 GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPS 117
G CVD+ GY C CP + G+ C ++ C+ D C G+ Y + + F C C +
Sbjct: 1240 GRCVDRVGGYGCVCPAGFVGERCEGDVNECLS-DPCDPSGS---YNCVQLINDFRCECRT 1295
Query: 118 GYHGKICEKI 127
GY GK CE +
Sbjct: 1296 GYTGKRCETV 1305
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C +PC +G C + R G+ C C P + G C ++ C P+ C NGG C+ +
Sbjct: 871 CVRNPCTNGGVCENLRGGFQCRCNPGFTGALCENDIDDCE-PNPCSNGGVCQDRV----- 924
Query: 109 HRFNCTCPSGYHGKICEK 126
+ F C C +G+ G+ C +
Sbjct: 925 NGFVCVCLAGFRGERCAE 942
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA +PCK+G+ C D Y C+C P + G +C +++ C + + G C+ +
Sbjct: 530 CASTPCKNGAKCTDGPNKYTCECTPGFSGIHCELDINECAS--SPCHYGVCRDGVA---- 583
Query: 109 HRFNCTCPSGYHGKICE 125
F C C GY G++CE
Sbjct: 584 -SFTCDCRPGYTGRLCE 599
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 50 CAYSPCKH-GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C +PC++ +C+D+ G+ C C P Y G C + C CLNG +D+
Sbjct: 455 CKSNPCQNDATCLDQIGGFHCICMPGYEGVFCQINSDDCAS-QPCLNG-----KCIDKI- 507
Query: 109 HRFNCTCPSGYHGKICE 125
+ F+C CP G+ G +C+
Sbjct: 508 NSFHCECPKGFSGSLCQ 524
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 16/114 (14%)
Query: 15 LHGKQFSIGTNSVLNVIMLKSDYRLIIRPLYSLCPCAYSPCKHGSCVD--KRAGYFCDCP 72
+ G + + + VL SD RL + P+ C SPC++G + C C
Sbjct: 77 MQGNEVGVKCDCVLGF----SD-RLCLTPVNHAC--MNSPCRNGGTCSLLTLDTFTCRCQ 129
Query: 73 PTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICEK 126
P + GK C +L + C NGG C + + + CTCP +HG+ C +
Sbjct: 130 PGWSGKTC--QLADPCASNPCANGGQCSAF-----ESHYICTCPPNFHGQTCRQ 176
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 13/84 (15%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGC-------VGPDTCLNGGTCKP 101
C PC++G +C+D Y C CP G +C +++ C G C NGG C
Sbjct: 1185 CLSQPCQNGGTCIDLVNTYKCSCPRGTQGVHCEIDIDDCSPSVDPLTGEPRCFNGGRC-- 1242
Query: 102 YLVDETQHRFNCTCPSGYHGKICE 125
VD + C CP+G+ G+ CE
Sbjct: 1243 --VDRVGG-YGCVCPAGFVGERCE 1263
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Query: 59 SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDT-CLNGGTCKPYLVDETQHRFNCTCPS 117
+CV + C+C Y GK C GC DT C NGGTC + T+H + C C
Sbjct: 1281 NCVQLINDFRCECRTGYTGKRCETVFNGCK--DTPCKNGGTCA--VASNTKHGYICKCQP 1336
Query: 118 GYHGKICE 125
GY G CE
Sbjct: 1337 GYSGSSCE 1344
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C PC++G SC D Y C CP Y G NC + C C NGG+C +
Sbjct: 1023 CDSRPCQNGGSCQDGYGTYKCTCPHGYTGLNCQSLVRWCDS-SPCKNGGSCW-----QQG 1076
Query: 109 HRFNCTCPSGYHGKICE 125
F C C SG+ G C+
Sbjct: 1077 ASFTCQCASGWTGIYCD 1093
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA + C HG+ C D+ A +FC+CP G C ++ C+ + C G C +
Sbjct: 338 CASAACSHGATCHDRVASFFCECPHGRTGLLCHLD-DACIS-NPCQKGSNCD---TNPVS 392
Query: 109 HRFNCTCPSGYHGKICEK 126
+ CTCP GY G C +
Sbjct: 393 GKAICTCPPGYTGSACNQ 410
Score = 38.1 bits (87), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
Query: 58 GSCVDKRAGYFCDCPPTYGGKNCSVELTGC-VGPDTCLNGGTCKPYLVDETQHRFNCTCP 116
G C+D Y C C + G+ C+ ++ C + P+ C NGGTC T F+C C
Sbjct: 269 GPCIDGINTYNCHCDKHWTGQYCTEDVDECELSPNACQNGGTCH-----NTIGGFHCVCV 323
Query: 117 SGYHGKIC-EKITTMSFSGGSH 137
+G+ G C E I + + SH
Sbjct: 324 NGWTGDDCSENIDDCASAACSH 345
Score = 37.0 bits (84), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 58 GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPS 117
G+CVD + + C C P + G C ++ C C NGG+C+ + + CTCP
Sbjct: 994 GTCVDGISSFSCVCLPGFTGNYCQHDVNECDS-RPCQNGGSCQ-----DGYGTYKCTCPH 1047
Query: 118 GYHGKICEKI 127
GY G C+ +
Sbjct: 1048 GYTGLNCQSL 1057
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 9/82 (10%)
Query: 49 PCAYSPCKHGSCVDKR-----AGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYL 103
PC SPC++G + G CDC + + C + C NGGTC
Sbjct: 61 PCNPSPCRNGGVCRPQMQGNEVGVKCDCVLGFSDRLCLTPVNHACMNSPCRNGGTCSLLT 120
Query: 104 VDETQHRFNCTCPSGYHGKICE 125
+D F C C G+ GK C+
Sbjct: 121 LD----TFTCRCQPGWSGKTCQ 138
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 7/79 (8%)
Query: 48 CPCAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDE 106
C +PC+HG C++ + + C C Y G C +++ C + C N TC +
Sbjct: 415 CSLGANPCEHGGRCLNTKGSFQCKCLQGYEGPRCEMDVNECKS-NPCQNDATCLDQI--- 470
Query: 107 TQHRFNCTCPSGYHGKICE 125
F+C C GY G C+
Sbjct: 471 --GGFHCICMPGYEGVFCQ 487
Score = 33.5 bits (75), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C PC++G +C D+ Y C CP G NC + + C + G C +D+
Sbjct: 605 CLSQPCRNGGTCQDRENAYICTCPKGTTGVNCEINIDDCKRKP--CDYGKC----IDKI- 657
Query: 109 HRFNCTCPSGYHGKIC 124
+ + C C GY G +C
Sbjct: 658 NGYECVCEPGYSGSMC 673
>sp|Q99466|NOTC4_HUMAN Neurogenic locus notch homolog protein 4 OS=Homo sapiens GN=NOTCH4
PE=1 SV=2
Length = 2003
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 49 PCAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDET 107
PC PC++G+ C+ + +GY C C P Y G+NCS EL C C N GTC P
Sbjct: 933 PCESRPCQNGATCMAQPSGYLCQCAPGYDGQNCSKELDACQS-QPCHNHGTCTP-----K 986
Query: 108 QHRFNCTCPSGYHGKICE 125
F+C CP G+ G CE
Sbjct: 987 PGGFHCACPPGFVGLRCE 1004
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 14/96 (14%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGC-VGPDTCLNGGTCKPYLVDET 107
C +PC HG +C + +GY C CP Y G CS E+T C GP CLNGG+C P +
Sbjct: 695 CISAPCAHGGTCYPQPSGYNCTCPTGYTGPTCSEEMTACHSGP--CLNGGSCNP-----S 747
Query: 108 QHRFNCTCPSGYHGKICEK-----ITTMSFSGGSHI 138
+ CTCP + G C+ ++ F+GG+ +
Sbjct: 748 PGGYYCTCPPSHTGPQCQTSTDYCVSAPCFNGGTCV 783
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
Query: 55 CKHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCT 114
C HG C +R+ CD + G C EL GC+ C +GGTC P +NCT
Sbjct: 667 CHHGHC--QRSSCVCDV--GWTGPECEAELGGCIS-APCAHGGTCYPQPSG-----YNCT 716
Query: 115 CPSGYHGKICEKITTMSFSG 134
CP+GY G C + T SG
Sbjct: 717 CPTGYTGPTCSEEMTACHSG 736
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Query: 53 SPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRF 111
SPC+HG SC++ + C CPP Y G C + C+ C G TC L F
Sbjct: 444 SPCEHGGSCLNTPGSFNCLCPPGYTGSRCEADHNECLS-QPCHPGSTCLDLLA-----TF 497
Query: 112 NCTCPSGYHGKICEKITTMSFS 133
+C CP G G++CE T S
Sbjct: 498 HCLCPPGLEGQLCEVETNECAS 519
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 58 GSCVDKRAGYFCDCPPTYGGKNCSVELTGC--VGPDTCLNGGTCKPYLVDETQHRFNCTC 115
G+C D Y C CP T+ G +CS ++ C GP C NGGTC+ + F+C C
Sbjct: 289 GTCQDGLDTYTCLCPETWTGWDCSEDVDECETQGPPHCRNGGTCQ-----NSAGSFHCVC 343
Query: 116 PSGYHGKICEK 126
SG+ G CE+
Sbjct: 344 VSGWGGTSCEE 354
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C SPC +G C D+ + C C P + G C E+ C+ D C G +C +
Sbjct: 555 CRSSPCANGGQCQDQPGAFHCKCLPGFEGPRCQTEVDECLS-DPCPVGASCL-----DLP 608
Query: 109 HRFNCTCPSGYHGKICE 125
F C CPSG+ G++CE
Sbjct: 609 GAFFCLCPSGFTGQLCE 625
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 35/78 (44%), Gaps = 7/78 (8%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C PC GS C+D A + C CPP G+ C VE C CLN C L
Sbjct: 479 CLSQPCHPGSTCLDLLATFHCLCPPGLEGQLCEVETNECAS-APCLNHADCHDLL----- 532
Query: 109 HRFNCTCPSGYHGKICEK 126
+ F C C G+ G CE+
Sbjct: 533 NGFQCICLPGFSGTRCEE 550
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 29/69 (42%), Gaps = 6/69 (8%)
Query: 58 GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPS 117
G CVD YFC CPP + G C + C C NG TC + C C
Sbjct: 905 GLCVDSGPSYFCHCPPGFQGSLCQDHVNPCES-RPCQNGATCM-----AQPSGYLCQCAP 958
Query: 118 GYHGKICEK 126
GY G+ C K
Sbjct: 959 GYDGQNCSK 967
Score = 37.7 bits (86), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Query: 50 CAYSPC-KHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA +PC H C D G+ C C P + G C ++ C C NGG C+ +
Sbjct: 517 CASAPCLNHADCHDLLNGFQCICLPGFSGTRCEEDIDECRS-SPCANGGQCQ-----DQP 570
Query: 109 HRFNCTCPSGYHGKICE 125
F+C C G+ G C+
Sbjct: 571 GAFHCKCLPGFEGPRCQ 587
Score = 36.2 bits (82), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 5/77 (6%)
Query: 50 CAYSPC-KHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C PC HG+C K G+ C CPP + G C ++ C+ C GT
Sbjct: 972 CQSQPCHNHGTCTPKPGGFHCACPPGFVGLRCEGDVDECLD-QPCHPTGT---AACHSLA 1027
Query: 109 HRFNCTCPSGYHGKICE 125
+ F C C G+ G+ CE
Sbjct: 1028 NAFYCQCLPGHTGQWCE 1044
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Query: 54 PCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFN 112
PC G SC + + C CP G C + C P C NGGTC+ L+ E F+
Sbjct: 204 PCPKGTSCHNTLGSFQCLCPVGQEGPRCELRAGPCP-PRGCSNGGTCQ--LMPEKDSTFH 260
Query: 113 -CTCPSGYHGKICE 125
C CP G+ G CE
Sbjct: 261 LCLCPPGFIGPDCE 274
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 33/73 (45%), Gaps = 9/73 (12%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C PC G SC+D +FC CP + G+ C V L P+ C CK + +
Sbjct: 593 CLSDPCPVGASCLDLPGAFFCLCPSGFTGQLCEVPL---CAPNLCQPKQICK-----DQK 644
Query: 109 HRFNCTCPSGYHG 121
+ NC CP G G
Sbjct: 645 DKANCLCPDGSPG 657
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 31/72 (43%), Gaps = 7/72 (9%)
Query: 67 YFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKIC-E 125
+ C CPP + G +C V CV C NGGTC+ L + C CP + G C E
Sbjct: 260 HLCLCPPGFIGPDCEVNPDNCVS-HQCQNGGTCQDGL-----DTYTCLCPETWTGWDCSE 313
Query: 126 KITTMSFSGGSH 137
+ G H
Sbjct: 314 DVDECETQGPPH 325
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 67 YFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKIC 124
++C C P + G+ C VE+ C C +GGTC+ + F C CP G+ G C
Sbjct: 1030 FYCQCLPGHTGQWCEVEIDPCHS-QPCFHGGTCE--ATAGSPLGFICHCPKGFEGPTC 1084
Score = 33.9 bits (76), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 33/78 (42%), Gaps = 7/78 (8%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCV-GPDTCLNGGTCKPYLVDET 107
C+ +PC +G C+ C CPP + G C ++ C P C G +C T
Sbjct: 160 CSANPCVNGGVCLATYPQIQCHCPPGFEGHACERDVNECFQDPGPCPKGTSCH-----NT 214
Query: 108 QHRFNCTCPSGYHGKICE 125
F C CP G G CE
Sbjct: 215 LGSFQCLCPVGQEGPRCE 232
Score = 33.5 bits (75), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 38/87 (43%), Gaps = 9/87 (10%)
Query: 49 PCAYSPC-KHGSCVDKRAGY-FCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDE 106
PC S C K G C + +G C C P + G+ C +L + C+NGG C
Sbjct: 121 PCPPSFCSKRGRCHIQASGRPQCSCMPGWTGEQC--QLRDFCSANPCVNGGVCL-----A 173
Query: 107 TQHRFNCTCPSGYHGKICEKITTMSFS 133
T + C CP G+ G CE+ F
Sbjct: 174 TYPQIQCHCPPGFEGHACERDVNECFQ 200
Score = 32.7 bits (73), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 33/80 (41%), Gaps = 7/80 (8%)
Query: 49 PCAYSPCKHGSCVDKRAG----YFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLV 104
PC PC HG + AG + C CP + G CS C G C +GG C P
Sbjct: 1049 PCHSQPCFHGGTCEATAGSPLGFICHCPKGFEGPTCSHRAPSC-GFHHCHHGGLCLPSPK 1107
Query: 105 DETQHRFNCTCPSGYHGKIC 124
R C C SGY G C
Sbjct: 1108 PGFPPR--CACLSGYGGPDC 1125
Score = 32.7 bits (73), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 6/82 (7%)
Query: 50 CAYSPC-KHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C +PC G+CV++ + C C + G C +L C N TC+ ++
Sbjct: 771 CVSAPCFNGGTCVNRPGTFSCLCAMGFQGPRCEGKLRPSCADSPCRNRATCQ-----DSP 825
Query: 109 HRFNCTCPSGYHGKICEKITTM 130
C CP+GY G C+ + +
Sbjct: 826 QGPRCLCPTGYTGGSCQTLMDL 847
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
Query: 58 GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPS 117
G+C + + C C +GG +C L C+ TC G TC +D F+C CP
Sbjct: 330 GTCQNSAGSFHCVCVSGWGGTSCEENLDDCIA-ATCAPGSTC----IDRV-GSFSCLCPP 383
Query: 118 GYHGKIC 124
G G +C
Sbjct: 384 GRTGLLC 390
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 15/107 (14%)
Query: 50 CAYSPCKH-GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA SPC++ +C D G C CP Y G +C + D C + +T
Sbjct: 810 CADSPCRNRATCQDSPQGPRCLCPTGYTGGSCQTLM------DLCAQKPCPRNSHCLQTG 863
Query: 109 HRFNCTCPSGYHGKICEKITTMSFSGGSHIMLNTTREEGYDISFILH 155
F+C C G+ G +C + S L+ +G D+S + H
Sbjct: 864 PSFHCLCLQGWTGPLC----NLPLSSCQKAALS----QGIDVSSLCH 902
Score = 30.8 bits (68), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 42/132 (31%), Gaps = 49/132 (37%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCP------------------------------------ 72
C + C GS C+D+ + C CP
Sbjct: 359 CIAATCAPGSTCIDRVGSFSCLCPPGRTGLLCHLEDMCLSQPCHGDAQCSTNPLTGSTLC 418
Query: 73 ---PTYGGKNCSVELTGCV----GPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICE 125
P Y G C +L C+ GP C +GG+C T FNC CP GY G CE
Sbjct: 419 LCQPGYSGPTCHQDLDECLMAQQGPSPCEHGGSCL-----NTPGSFNCLCPPGYTGSRCE 473
Query: 126 KITTMSFSGGSH 137
S H
Sbjct: 474 ADHNECLSQPCH 485
Score = 29.3 bits (64), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 40/98 (40%), Gaps = 12/98 (12%)
Query: 40 IIRPLYSLCPCAYSPCKHG-SCVDKRAGY-FCDCPPTYGGKNCSVELTGCVGPDTCLNGG 97
++RP LC PC +G +C+ G C C P + G+ C C C NGG
Sbjct: 20 VVRPRGLLCGSFPEPCANGGTCLSLSLGQGTCQCAPGFLGETCQFPDP-CQNAQLCQNGG 78
Query: 98 TCKPYLVDE---------TQHRFNCTCPSGYHGKICEK 126
+C+ L F CTC G+ G+ C+
Sbjct: 79 SCQALLPAPLGLPSSPSPLTPSFLCTCLPGFTGERCQA 116
>sp|Q9UM47|NOTC3_HUMAN Neurogenic locus notch homolog protein 3 OS=Homo sapiens GN=NOTCH3
PE=1 SV=2
Length = 2321
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 49 PCAYSPCKHGS--CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDE 106
PC SPC HG+ V + C CPP Y G++C ++ C + C +GGTC
Sbjct: 122 PCLSSPCAHGARCSVGPDGRFLCSCPPGYQGRSCRSDVDECRVGEPCRHGGTCL-----N 176
Query: 107 TQHRFNCTCPSGYHGKICEK 126
T F C CP+GY G +CE
Sbjct: 177 TPGSFRCQCPAGYTGPLCEN 196
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
Query: 50 CAYSPCKHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQH 109
C +PC G+C D A + C CPP YGG +C +L C P +C NGGTC VD +
Sbjct: 891 CLSNPCGPGTCTDHVASFTCTCPPGYGGFHCEQDLPDC-SPSSCFNGGTC----VDGV-N 944
Query: 110 RFNCTCPSGYHGKICE 125
F+C C GY G C+
Sbjct: 945 SFSCLCRPGYTGAHCQ 960
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Query: 49 PCAYSPCKHGSCVDKRAGYFCDCPPTYGGKNCSVELT--GCVGPDTCLNGGTCKPYLVDE 106
PCA+ PC HG C D G+ C C P + G CS L C C GGTC
Sbjct: 698 PCAHEPCSHGICYDAPGGFRCVCEPGWSGPRCSQSLARDACES-QPCRAGGTCS-----S 751
Query: 107 TQHRFNCTCPSGYHGKICEKIT 128
F+CTCP G G+ CE ++
Sbjct: 752 DGMGFHCTCPPGVQGRQCELLS 773
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 44/97 (45%), Gaps = 12/97 (12%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGC-VGP-----DTCLNGGTCKPY 102
CA PC+HG SC+D A Y C CPP G C + C GP CL+ GTC
Sbjct: 1126 CASQPCQHGGSCIDLVARYLCSCPPGTLGVLCEINEDDCGPGPPLDSGPRCLHNGTC--- 1182
Query: 103 LVDETQHRFNCTCPSGYHGKICEKITTMSFSGGSHIM 139
VD F CTCP GY G CE SG H
Sbjct: 1183 -VDLVGG-FRCTCPPGYTGLRCEADINECRSGACHAA 1217
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Query: 49 PCAYSPCKHGSCVDKRAG--YFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDE 106
PCA SPC++G + Y C C P + G+NC V + C G CLNGGTC VD
Sbjct: 200 PCAPSPCRNGGTCRQSGDLTYDCACLPGFEGQNCEVNVDDCPG-HRCLNGGTC----VDG 254
Query: 107 TQHRFNCTCPSGYHGKICEK 126
+ +NC CP + G+ C +
Sbjct: 255 V-NTYNCQCPPEWTGQFCTE 273
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 49 PCAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDET 107
PC PC+HG +C GY C+C P Y G NC ++ C C +GG+C +
Sbjct: 1087 PCLAQPCQHGGTCRGYMGGYMCECLPGYNGDNCEDDVDECAS-QPCQHGGSCIDLVA--- 1142
Query: 108 QHRFNCTCPSGYHGKICE 125
R+ C+CP G G +CE
Sbjct: 1143 --RYLCSCPPGTLGVLCE 1158
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 50 CAYSPCKHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQH 109
C+ PC HG CVD A + C C P Y G C ++ C C +GG C LVD
Sbjct: 549 CSPDPCHHGRCVDGIASFSCACAPGYTGTRCESQVDECRS-QPCRHGGKCL-DLVD---- 602
Query: 110 RFNCTCPSGYHGKICE 125
++ C CPSG G CE
Sbjct: 603 KYLCRCPSGTTGVNCE 618
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 7/82 (8%)
Query: 47 LCPCAYSPCKHGSCVDKRAGYF--CDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLV 104
L PC +PC+HG + G C CP + G C ++ C GP C G C
Sbjct: 772 LSPCTPNPCEHGGRCESAPGQLPVCSCPQGWQGPRCQQDVDECAGPAPCGPHGICT---- 827
Query: 105 DETQHRFNCTCPSGYHGKICEK 126
F+CTC GY G C++
Sbjct: 828 -NLAGSFSCTCHGGYTGPSCDQ 848
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 50 CAYSPCK-HGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C PC+ +C+D+ + C C + G C V++ C C+NGG CK +
Sbjct: 435 CLSGPCRNQATCLDRIGQFTCICMAGFTGTYCEVDIDECQS-SPCVNGGVCK-----DRV 488
Query: 109 HRFNCTCPSGYHGKICE 125
+ F+CTCPSG+ G C+
Sbjct: 489 NGFSCTCPSGFSGSTCQ 505
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Query: 53 SPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRF 111
PC+HG +C++ + C CP Y G C C P C NGGTC+ +
Sbjct: 166 EPCRHGGTCLNTPGSFRCQCPAGYTGPLCENPAVPCA-PSPCRNGGTCR----QSGDLTY 220
Query: 112 NCTCPSGYHGKICE 125
+C C G+ G+ CE
Sbjct: 221 DCACLPGFEGQNCE 234
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 6/70 (8%)
Query: 58 GSCVDKRAGYFCDCPPTYGGKNCSVELTGC-VGPDTCLNGGTCKPYLVDETQHRFNCTCP 116
G+CVD Y C CPP + G+ C+ ++ C + P+ C NGGTC T +C C
Sbjct: 249 GTCVDGVNTYNCQCPPEWTGQFCTEDVDECQLQPNACHNGGTCF-----NTLGGHSCVCV 303
Query: 117 SGYHGKICEK 126
+G+ G+ C +
Sbjct: 304 NGWTGESCSQ 313
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 6/68 (8%)
Query: 58 GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPS 117
G CVD+ + ++C CP G +C E+ C+ C +GGTC+ Y+ + C C
Sbjct: 1059 GQCVDEDSSHYCVCPEGRTGSHCEQEVDPCLA-QPCQHGGTCRGYMGG-----YMCECLP 1112
Query: 118 GYHGKICE 125
GY+G CE
Sbjct: 1113 GYNGDNCE 1120
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C SPC +G C D+ G+ C CP + G C +++ C C NG C VD+
Sbjct: 473 CQSSPCVNGGVCKDRVNGFSCTCPSGFSGSTCQLDVDECAS-TPCRNGAKC----VDQPD 527
Query: 109 HRFNCTCPSGYHGKICEK 126
+ C C G+ G +C++
Sbjct: 528 G-YECRCAEGFEGTLCDR 544
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA +PC++G+ CVD+ GY C C + G C + C PD C +G VD
Sbjct: 511 CASTPCRNGAKCVDQPDGYECRCAEGFEGTLCDRNVDDC-SPDPCHHG-----RCVDGIA 564
Query: 109 HRFNCTCPSGYHGKICEK 126
F+C C GY G CE
Sbjct: 565 S-FSCACAPGYTGTRCES 581
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 37/78 (47%), Gaps = 8/78 (10%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C +PC +G SC D + C C P + G C+ ++ D CL+ C P +
Sbjct: 853 CDPNPCLNGGSCQDGVGSFSCSCLPGFAGPRCARDV------DECLS-NPCGPGTCTDHV 905
Query: 109 HRFNCTCPSGYHGKICEK 126
F CTCP GY G CE+
Sbjct: 906 ASFTCTCPPGYGGFHCEQ 923
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Query: 50 CAYSPCKHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQH 109
CA +PC G C D Y C C P + G C+VE+ C C GG+C + ++
Sbjct: 624 CASNPCTFGVCRDGINRYDCVCQPGFTGPLCNVEINECAS-SPCGEGGSCV-----DGEN 677
Query: 110 RFNCTCPSGYHGKIC 124
F C CP G +C
Sbjct: 678 GFRCLCPPGSLPPLC 692
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 7/82 (8%)
Query: 53 SPC-KHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRF 111
+PC HG C + + C C Y G +C ++ C P+ CLNGG+C+ + F
Sbjct: 818 APCGPHGICTNLAGSFSCTCHGGYTGPSCDQDINDC-DPNPCLNGGSCQ-----DGVGSF 871
Query: 112 NCTCPSGYHGKICEKITTMSFS 133
+C+C G+ G C + S
Sbjct: 872 SCSCLPGFAGPRCARDVDECLS 893
Score = 37.0 bits (84), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C PC+HG C+D Y C CP G NC V + C + C G + +
Sbjct: 586 CRSQPCRHGGKCLDLVDKYLCRCPSGTTGVNCEVNIDDCAS-NPCTFG------VCRDGI 638
Query: 109 HRFNCTCPSGYHGKIC 124
+R++C C G+ G +C
Sbjct: 639 NRYDCVCQPGFTGPLC 654
Score = 36.6 bits (83), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 33/78 (42%), Gaps = 9/78 (11%)
Query: 49 PCAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDET 107
PC PC HG C G+ C C ++ G C + C C NGG C
Sbjct: 965 PCLSRPCLHGGVCSAAHPGFRCTCLESFTGPQCQTLVDWCSR-QPCQNGGRC-------V 1016
Query: 108 QHRFNCTCPSGYHGKICE 125
Q C CP G+ G++C+
Sbjct: 1017 QTGAYCLCPPGWSGRLCD 1034
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 69 CDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKIC 124
C CPP + G+ C +E GP C G C+ +V T RF+C CP G+ G C
Sbjct: 65 CLCPPGWVGERCQLEDPCHSGP--CAGRGVCQSSVVAGTA-RFSCRCPRGFRGPDC 117
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 17/87 (19%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSV------ELTGCVG---PDTCLNGGTC 99
C+ PC++G CV + G +C CPP + G+ C + E +G C GG C
Sbjct: 1004 CSRQPCQNGGRCV--QTGAYCLCPPGWSGRLCDIRSLPCREAAAQIGVRLEQLCQAGGQC 1061
Query: 100 KPYLVDETQHRFNCTCPSGYHGKICEK 126
VDE + C CP G G CE+
Sbjct: 1062 ----VDEDSSHY-CVCPEGRTGSHCEQ 1083
Score = 35.0 bits (79), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 9/76 (11%)
Query: 57 HGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHR---FNC 113
+G+CVD G+ C CPP Y G C ++ + C +G + D Q F C
Sbjct: 1179 NGTCVDLVGGFRCTCPPGYTGLRCEADI------NECRSGACHAAHTRDCLQDPGGGFRC 1232
Query: 114 TCPSGYHGKICEKITT 129
C +G+ G C+ + +
Sbjct: 1233 LCHAGFSGPRCQTVLS 1248
Score = 34.3 bits (77), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Query: 58 GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPS 117
G+CVD + C C P Y G +C E C+ CL+GG C F CTC
Sbjct: 937 GTCVDGVNSFSCLCRPGYTGAHCQHEADPCLS-RPCLHGGVCS-----AAHPGFRCTCLE 990
Query: 118 GYHGKICEKI 127
+ G C+ +
Sbjct: 991 SFTGPQCQTL 1000
Score = 33.5 bits (75), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 33/75 (44%), Gaps = 8/75 (10%)
Query: 61 VDKRAGYFCDCPPTYGGKNCSVELTGC-VGPDTCLNGGTCKPYLVDETQHRFNCTCPSGY 119
V+ RA C CPP + G C ++ C +G + C + G C TQ F C C GY
Sbjct: 371 VNGRA--ICTCPPGFTGGACDQDVDECSIGANPCEHLGRCV-----NTQGSFLCQCGRGY 423
Query: 120 HGKICEKITTMSFSG 134
G CE SG
Sbjct: 424 TGPRCETDVNECLSG 438
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 35/88 (39%), Gaps = 21/88 (23%)
Query: 49 PCAYSPCK-----HGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLN-----GGT 98
PC PC S V A + C CP + G +CS+ PD CL+ G
Sbjct: 81 PCHSGPCAGRGVCQSSVVAGTARFSCRCPRGFRGPDCSL-------PDPCLSSPCAHGAR 133
Query: 99 CKPYLVDETQHRFNCTCPSGYHGKICEK 126
C RF C+CP GY G+ C
Sbjct: 134 CS----VGPDGRFLCSCPPGYQGRSCRS 157
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 47/133 (35%), Gaps = 14/133 (10%)
Query: 9 IRTLDLLHGKQFSIGTNSVLN--VIMLKSDYRLIIRPLYS--LCPCAYSPCKHGSC---- 60
I D G G + N + L +R P Y+ C + C+ G+C
Sbjct: 1159 INEDDCGPGPPLDSGPRCLHNGTCVDLVGGFRCTCPPGYTGLRCEADINECRSGACHAAH 1218
Query: 61 -----VDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTC 115
D G+ C C + G C L+ C C +GG C+P F C C
Sbjct: 1219 TRDCLQDPGGGFRCLCHAGFSGPRCQTVLSPCES-QPCQHGGQCRPSPGPGGGLTFTCHC 1277
Query: 116 PSGYHGKICEKIT 128
+ G CE++
Sbjct: 1278 AQPFWGPRCERVA 1290
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA + C HG+ C D+ A ++C CP G C ++ CV + C C +
Sbjct: 318 CATAVCFHGATCHDRVASFYCACPMGKTGLLCHLD-DACVS-NPCHEDAICD---TNPVN 372
Query: 109 HRFNCTCPSGYHGKICEK 126
R CTCP G+ G C++
Sbjct: 373 GRAICTCPPGFTGGACDQ 390
Score = 30.0 bits (66), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 28/79 (35%), Gaps = 12/79 (15%)
Query: 60 CVDKRAGYFCDCPPTYGGKNC--------SVELTGCVGPDTCLNGGTCKPYLVDETQHRF 111
C G C CPP G +C C CL+GG+C+P + F
Sbjct: 1304 CQQTPRGPRCACPPGLSGPSCRSFPGSPPGASNASCAA-APCLHGGSCRPAPLAPF---F 1359
Query: 112 NCTCPSGYHGKICEKITTM 130
C C G+ G CE
Sbjct: 1360 RCACAQGWTGPRCEAPAAA 1378
>sp|Q6DI48|DLLA_DANRE Delta-like protein A OS=Danio rerio GN=dla PE=1 SV=1
Length = 772
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 7/77 (9%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C+ PC++G +C + +GY C CPP Y G+NCS ++ C + C NG TC E
Sbjct: 449 CSMYPCQNGGTCQEGASGYMCTCPPGYTGRNCSSPVSRCQH-NPCHNGATCH-----ERN 502
Query: 109 HRFNCTCPSGYHGKICE 125
+R+ C C SGY G+ C+
Sbjct: 503 NRYVCACVSGYGGRNCQ 519
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 41/79 (51%), Gaps = 8/79 (10%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCV-GPDTCLNGGTCKPYLVDET 107
C +PC++G SC D Y C CPP + GKNC + C GP C NGG C D
Sbjct: 334 CTGNPCRNGGSCTDMENTYSCTCPPGFYGKNCELSAMTCADGP--CFNGGRC----ADNP 387
Query: 108 QHRFNCTCPSGYHGKICEK 126
+ C CP+GY G CEK
Sbjct: 388 DGGYFCQCPTGYAGFNCEK 406
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 51/86 (59%), Gaps = 9/86 (10%)
Query: 52 YSPCKHGS-CVDKRAG-YFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQH 109
+ PC +G+ C + G Y C C P + G +C +E+ C G + C NGG+C + ++
Sbjct: 297 HKPCLNGATCSNTGQGSYTCSCRPGFSGASCEIEVNECTG-NPCRNGGSCT-----DMEN 350
Query: 110 RFNCTCPSGYHGKICEKITTMSFSGG 135
++CTCP G++GK CE ++ M+ + G
Sbjct: 351 TYSCTCPPGFYGKNCE-LSAMTCADG 375
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 36/80 (45%), Gaps = 8/80 (10%)
Query: 50 CAYSPC-KHGSCVDK-RAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDET 107
CA PC G C D GYFC CP Y G NC ++ C C NG C +
Sbjct: 372 CADGPCFNGGRCADNPDGGYFCQCPTGYAGFNCEKKIDHCSS-SPCSNGARCVDLV---- 426
Query: 108 QHRFNCTCPSGYHGKICEKI 127
+ + C CP G+ G C++
Sbjct: 427 -NSYLCQCPDGFTGMNCDRA 445
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Query: 52 YSPCKHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRF 111
Y C HG+C + + C+C +GG C+ +L C CLNG TC + Q +
Sbjct: 262 YPGCLHGTC---QQPWQCNCQEGWGGLFCNQDLNYCTHHKPCLNGATCS----NTGQGSY 314
Query: 112 NCTCPSGYHGKICE 125
C+C G+ G CE
Sbjct: 315 TCSCRPGFSGASCE 328
>sp|Q61483|DLL1_MOUSE Delta-like protein 1 OS=Mus musculus GN=Dll1 PE=1 SV=2
Length = 722
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 9/86 (10%)
Query: 52 YSPCKHGS-CVDKRAG-YFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQH 109
+ PC++G+ C + G Y C C P Y G NC +E+ C P C NG +C + +
Sbjct: 294 HKPCRNGATCTNTGQGSYTCSCRPGYTGANCELEVDECA-PSPCKNGASCT-----DLED 347
Query: 110 RFNCTCPSGYHGKICEKITTMSFSGG 135
F+CTCP G++GK+CE ++ M+ + G
Sbjct: 348 SFSCTCPPGFYGKVCE-LSAMTCADG 372
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 39/76 (51%), Gaps = 7/76 (9%)
Query: 50 CAYSPCKHGS-CVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C SPC +G+ CVD Y C C + G+ C + C C NGGTC+ + D
Sbjct: 408 CGSSPCSNGAKCVDLGNSYLCRCQAGFSGRYCEDNVDDCAS-SPCANGGTCRDSVND--- 463
Query: 109 HRFNCTCPSGYHGKIC 124
F+CTCP GY GK C
Sbjct: 464 --FSCTCPPGYTGKNC 477
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCV-GPDTCLNGGTCKPYLVDET 107
CA SPCK+G SC D + C CPP + GK C + C GP C NGG C D
Sbjct: 331 CAPSPCKNGASCTDLEDSFSCTCPPGFYGKVCELSAMTCADGP--CFNGGRCS----DNP 384
Query: 108 QHRFNCTCPSGYHGKICEK 126
+ C CP G+ G CEK
Sbjct: 385 DGGYTCHCPLGFSGFNCEK 403
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
CA SPC +G +C D + C CPP Y GKNCS ++ C C NG TC +
Sbjct: 446 CASSPCANGGTCRDSVNDFSCTCPPGYTGKNCSAPVSRCEHA-PCHNGATCH-----QRG 499
Query: 109 HRFNCTCPSGYHGKICE 125
R+ C C GY G C+
Sbjct: 500 QRYMCECAQGYGGPNCQ 516
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 7/74 (9%)
Query: 52 YSPCKHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRF 111
Y C HG+C + + C+C +GG C+ +L C C NG TC + Q +
Sbjct: 259 YPGCLHGTC---QQPWQCNCQEGWGGLFCNQDLNYCTHHKPCRNGATC----TNTGQGSY 311
Query: 112 NCTCPSGYHGKICE 125
C+C GY G CE
Sbjct: 312 TCSCRPGYTGANCE 325
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 36/78 (46%), Gaps = 8/78 (10%)
Query: 50 CAYSPC-KHGSCVDK-RAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDET 107
CA PC G C D GY C CP + G NC ++ C G C NG C +
Sbjct: 369 CADGPCFNGGRCSDNPDGGYTCHCPLGFSGFNCEKKMDLC-GSSPCSNGAKCV-----DL 422
Query: 108 QHRFNCTCPSGYHGKICE 125
+ + C C +G+ G+ CE
Sbjct: 423 GNSYLCRCQAGFSGRYCE 440
>sp|P10041|DL_DROME Neurogenic locus protein delta OS=Drosophila melanogaster GN=Dl
PE=1 SV=2
Length = 833
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 42/83 (50%), Gaps = 16/83 (19%)
Query: 50 CAYSPCKHGSCVDKR-------AGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPY 102
C+ PC G C + R GY C+CP Y G NC ++L C P+ C+NGG+C+P
Sbjct: 378 CSDKPCHQGICRNVRPGLGSKGQGYQCECPIGYSGPNCDLQLDNC-SPNPCINGGSCQP- 435
Query: 103 LVDETQHRFNCTCPSGYHGKICE 125
C CP+G+ G CE
Sbjct: 436 -------SGKCICPAGFSGTRCE 451
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 52 YSPCKHG-SCVDKRAG-YFCDCPPTYGGKNCSVELTGC-VGPDTCLNGGTCKPYLVDE-- 106
+ PCK+G +C + G Y C C P Y G +C E+ C + C NGGTC +DE
Sbjct: 298 HRPCKNGGTCFNTGEGLYTCKCAPGYSGDDCENEIYSCDADVNPCQNGGTC----IDEPH 353
Query: 107 TQHRFNCTCPSGYHGKICEK 126
T+ + C C +G+ GK+CE+
Sbjct: 354 TKTGYKCHCANGWSGKMCEE 373
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 9/97 (9%)
Query: 50 CAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGC-VGPDTCLNGGTCKPYLVDET 107
C PC +G +C++ Y C C + GK+CSV++ C GP C NGGTC +
Sbjct: 495 CLIRPCANGGTCLNLNNDYQCTCRAGFTGKDCSVDIDECSSGP--CHNGGTCMNRV---- 548
Query: 108 QHRFNCTCPSGYHGKICEKITTMSFSGGSHIMLNTTR 144
+ F C C +G+ GK C++ + S + +H TT+
Sbjct: 549 -NSFECVCANGFRGKQCDEESYDSVTFDAHQYGATTQ 584
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Query: 58 GSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPS 117
G+C+D Y C C P + G +CS ++ C+ C NGGTC D + CTC +
Sbjct: 466 GTCIDMVNQYRCQCVPGFHGTHCSSKVDLCL-IRPCANGGTCLNLNND-----YQCTCRA 519
Query: 118 GYHGKICEKITTMSFSGGSH 137
G+ GK C SG H
Sbjct: 520 GFTGKDCSVDIDECSSGPCH 539
Score = 36.6 bits (83), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 34/78 (43%), Gaps = 8/78 (10%)
Query: 50 CAYSP-CKHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQ 108
C P C HG+C + C C +GG C+ +L C C NGGTC + +
Sbjct: 260 CVLEPNCIHGTC---NKPWTCICNEGWGGLYCNQDLNYCTNHRPCKNGGTC----FNTGE 312
Query: 109 HRFNCTCPSGYHGKICEK 126
+ C C GY G CE
Sbjct: 313 GLYTCKCAPGYSGDDCEN 330
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 13/98 (13%)
Query: 50 CAYSPCKHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQH 109
C+ +PC +G C CP + G C + C+G C NGGTC + +
Sbjct: 422 CSPNPCINGGSCQPSGK--CICPAGFSGTRCETNIDDCLG-HQCENGGTCIDMV-----N 473
Query: 110 RFNCTCPSGYHGKICEKITTMSF-----SGGSHIMLNT 142
++ C C G+HG C + +GG+ + LN
Sbjct: 474 QYRCQCVPGFHGTHCSSKVDLCLIRPCANGGTCLNLNN 511
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.142 0.471
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,483,739
Number of Sequences: 539616
Number of extensions: 2622610
Number of successful extensions: 9616
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 227
Number of HSP's successfully gapped in prelim test: 404
Number of HSP's that attempted gapping in prelim test: 5000
Number of HSP's gapped (non-prelim): 3161
length of query: 155
length of database: 191,569,459
effective HSP length: 107
effective length of query: 48
effective length of database: 133,830,547
effective search space: 6423866256
effective search space used: 6423866256
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 56 (26.2 bits)