Query psy11060
Match_columns 155
No_of_seqs 157 out of 1648
Neff 9.6
Searched_HMMs 29240
Date Fri Aug 16 17:04:01 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11060.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11060hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2vj3_A Neurogenic locus notch 99.7 3.9E-17 1.3E-21 108.4 10.7 107 19-131 7-125 (135)
2 4d90_A EGF-like repeat and dis 99.6 4.8E-15 1.6E-19 99.1 8.4 96 29-130 13-137 (143)
3 1tpg_A T-plasminogen activator 99.5 3.2E-14 1.1E-18 88.1 3.7 83 36-126 1-86 (91)
4 2vj3_A Neurogenic locus notch 99.4 5.4E-13 1.8E-17 88.3 7.4 93 47-145 5-103 (135)
5 1z1y_A Ookinete surface protei 99.4 9E-14 3.1E-18 96.8 0.8 117 29-147 17-161 (186)
6 2bou_A EGF-like module contain 99.3 1.9E-12 6.4E-17 86.5 4.8 83 37-125 19-133 (143)
7 1yo8_A Thrombospondin-2; EGF, 99.3 8.3E-12 2.8E-16 100.7 8.2 99 28-131 15-154 (634)
8 1z1y_A Ookinete surface protei 99.3 1.5E-12 5.1E-17 90.6 3.4 95 28-129 60-178 (186)
9 4d90_A EGF-like repeat and dis 99.3 7.3E-12 2.5E-16 83.4 5.4 96 48-144 1-116 (143)
10 1x7a_L Coagulation factor IX, 99.2 2.4E-11 8.2E-16 81.4 4.2 76 47-130 48-130 (146)
11 1dx5_I Thrombomodulin; serine 99.1 1.4E-11 4.8E-16 79.7 2.1 84 29-122 15-111 (118)
12 2c4f_L Coagulation factor VII 99.1 2.9E-11 1E-15 80.6 3.3 77 47-129 47-132 (142)
13 1emn_A Fibrillin; extracellula 99.1 6.2E-11 2.1E-15 71.7 4.5 70 47-123 5-77 (82)
14 2vj2_A Jagged-1; signalling, p 99.1 3E-11 1E-15 82.8 2.2 83 36-126 82-169 (169)
15 1nfu_B Coagulation factor XA, 99.1 1.9E-11 6.4E-16 85.5 0.5 75 47-128 42-123 (195)
16 1lmj_A Fibrillin 1; EGF, calci 99.0 8.6E-11 2.9E-15 71.7 2.9 69 47-122 3-79 (86)
17 2vh0_B Activated factor XA lig 99.0 3E-11 1E-15 79.8 0.5 76 47-129 42-124 (134)
18 3h5c_B Vitamin K-dependent pro 99.0 4.6E-10 1.6E-14 83.9 6.1 77 47-130 5-88 (317)
19 1yo8_A Thrombospondin-2; EGF, 99.0 4E-10 1.4E-14 91.0 5.7 90 47-143 3-122 (634)
20 3u7u_G Neuregulin 1; signaling 99.0 4.8E-10 1.6E-14 62.4 3.9 55 77-132 1-55 (55)
21 1aut_L Activated protein C; se 99.0 4.5E-10 1.5E-14 72.1 3.9 76 47-129 6-97 (114)
22 1dx5_I Thrombomodulin; serine 98.9 1.9E-10 6.4E-15 74.3 0.6 93 47-149 4-103 (118)
23 1z6c_A Vitamin K-dependent pro 98.9 6.4E-10 2.2E-14 68.0 1.9 69 47-125 3-77 (87)
24 2w2n_E LDL receptor, low-densi 98.8 2.5E-09 8.5E-14 67.9 2.0 73 42-122 19-100 (107)
25 1tpg_A T-plasminogen activator 98.8 8.8E-09 3E-13 63.4 4.4 57 30-86 25-90 (91)
26 2bou_A EGF-like module contain 98.7 1.8E-09 6.3E-14 71.8 0.7 88 53-149 7-122 (143)
27 4fbr_A Lectin, myxobacterial h 98.7 1.3E-11 4.6E-16 89.6 -11.1 98 28-130 44-206 (267)
28 2w86_A Fibrillin-1, fibrillin1 98.7 1.2E-09 4.2E-14 73.0 -1.2 88 29-123 16-141 (147)
29 1uzk_A Fibrillin-1; glycoprote 98.7 2.8E-09 9.7E-14 72.4 0.2 90 28-123 15-156 (162)
30 3p5b_L Low density lipoprotein 98.6 9.5E-08 3.2E-12 73.5 8.3 72 48-127 1-80 (400)
31 1edm_B Factor IX; epidermal gr 98.5 1.1E-07 3.9E-12 48.9 4.1 37 83-125 2-38 (39)
32 2gy5_A Angiopoietin-1 receptor 98.5 8.8E-08 3E-12 74.4 4.3 81 37-126 185-278 (423)
33 2gy5_A Angiopoietin-1 receptor 98.5 5.4E-07 1.9E-11 69.9 8.7 83 35-127 214-321 (423)
34 2ygq_A WIF-1, WNT inhibitory f 98.5 2.2E-07 7.6E-12 69.8 6.3 76 36-126 164-244 (324)
35 3fcs_B Integrin beta-3; beta p 98.4 1.1E-07 3.7E-12 77.8 3.3 83 30-125 448-559 (690)
36 2ygq_A WIF-1, WNT inhibitory f 98.4 3.7E-08 1.3E-12 74.0 0.5 76 36-126 196-276 (324)
37 3v65_B Low-density lipoprotein 98.4 1.2E-07 4.1E-12 72.6 2.7 74 47-128 3-85 (386)
38 1emn_A Fibrillin; extracellula 98.4 3.3E-07 1.1E-11 55.1 3.9 51 28-78 17-76 (82)
39 3u7u_G Neuregulin 1; signaling 98.4 2.6E-07 8.7E-12 51.3 3.0 39 47-85 8-52 (55)
40 4fbr_A Lectin, myxobacterial h 98.3 5.8E-10 2E-14 81.1 -10.5 94 29-128 5-137 (267)
41 2w86_A Fibrillin-1, fibrillin1 98.3 5E-09 1.7E-13 70.0 -5.8 97 47-148 4-131 (147)
42 2vj2_A Jagged-1; signalling, p 98.3 5.7E-08 2E-12 66.4 -0.6 90 37-142 50-149 (169)
43 1lmj_A Fibrillin 1; EGF, calci 98.3 3.2E-07 1.1E-11 55.6 2.8 50 29-78 17-79 (86)
44 2k2s_B Micronemal protein 6; m 98.2 1.9E-07 6.4E-12 52.9 0.6 45 83-133 10-57 (61)
45 1x7a_L Coagulation factor IX, 98.2 4.4E-07 1.5E-11 60.5 2.4 61 83-149 47-110 (146)
46 1edm_B Factor IX; epidermal gr 98.2 1.4E-06 4.8E-11 44.7 3.8 35 47-81 3-38 (39)
47 1uzk_A Fibrillin-1; glycoprote 98.2 2.8E-08 9.5E-13 67.4 -3.7 97 47-149 3-147 (162)
48 3fcs_B Integrin beta-3; beta p 98.2 1.5E-06 5.1E-11 71.1 5.6 77 37-126 504-600 (690)
49 1egf_A Epidermal growth factor 98.2 4.6E-06 1.6E-10 45.8 5.2 41 47-87 3-49 (53)
50 1k36_A Epiregulin; EGF-like fo 98.1 1.1E-06 3.7E-11 46.9 2.3 40 84-128 3-45 (46)
51 1z6c_A Vitamin K-dependent pro 98.1 9.2E-07 3.2E-11 53.7 2.1 61 83-150 2-68 (87)
52 2p28_B Integrin beta-2; hybrid 98.1 1.4E-06 4.7E-11 61.8 2.8 77 37-126 107-214 (217)
53 1a3p_A Epidermal growth factor 98.0 4.7E-06 1.6E-10 44.2 3.6 36 49-84 2-43 (45)
54 1egf_A Epidermal growth factor 98.0 1.1E-05 3.8E-10 44.2 5.0 42 84-128 3-46 (53)
55 3k6s_B Integrin beta-2; cell r 98.0 6.6E-06 2.2E-10 67.3 5.8 76 38-126 494-592 (687)
56 3h5c_B Vitamin K-dependent pro 98.0 2.3E-06 7.9E-11 63.7 2.9 61 83-149 4-68 (317)
57 1hae_A Heregulin-alpha; growth 98.0 1.8E-06 6.1E-11 49.2 1.7 47 85-132 7-54 (63)
58 1hae_A Heregulin-alpha; growth 98.0 2.3E-06 7.8E-11 48.8 1.9 43 48-90 7-55 (63)
59 1aut_L Activated protein C; se 98.0 1.3E-06 4.6E-11 55.7 0.8 61 83-149 5-78 (114)
60 2wg3_C Hedgehog-interacting pr 98.0 1.1E-06 3.9E-11 68.9 0.2 77 38-129 378-458 (463)
61 2c4f_L Coagulation factor VII 97.9 2.3E-06 7.7E-11 56.7 1.2 61 83-149 46-113 (142)
62 2w2n_E LDL receptor, low-densi 97.9 3.3E-06 1.1E-10 53.3 1.9 75 71-154 18-97 (107)
63 3m0c_C LDL receptor, low-densi 97.9 2.2E-05 7.4E-10 65.4 7.1 74 49-130 309-395 (791)
64 3ca7_A Protein spitz; argos, E 97.9 5.9E-07 2E-11 49.3 -1.8 46 68-127 4-49 (52)
65 1a3p_A Epidermal growth factor 97.9 2.1E-05 7.1E-10 41.6 4.0 33 92-127 10-42 (45)
66 3k6s_B Integrin beta-2; cell r 97.8 6.9E-06 2.4E-10 67.1 2.8 76 37-125 446-552 (687)
67 1k36_A Epiregulin; EGF-like fo 97.8 9E-06 3.1E-10 43.3 2.3 36 47-82 3-43 (46)
68 1nfu_B Coagulation factor XA, 97.8 1.2E-06 4.1E-11 61.1 -1.9 60 83-148 41-104 (195)
69 2vh0_B Activated factor XA lig 97.7 2.1E-06 7.2E-11 56.3 -1.9 59 83-147 41-103 (134)
70 3ca7_A Protein spitz; argos, E 97.6 2.7E-06 9.4E-11 46.5 -1.8 41 37-82 3-48 (52)
71 1n7d_A LDL receptor, low-densi 97.6 8.6E-05 2.9E-09 61.0 5.4 61 59-127 307-374 (699)
72 1nql_B Epidermal growth factor 97.6 2.6E-05 8.8E-10 42.8 1.5 35 92-129 13-47 (53)
73 2k2s_B Micronemal protein 6; m 97.5 6.6E-06 2.2E-10 46.5 -1.2 35 47-81 11-49 (61)
74 1g1s_A P-selectin; selectin, l 97.5 3.5E-05 1.2E-09 51.7 1.5 41 85-131 120-160 (162)
75 3p5b_L Low density lipoprotein 97.4 3.9E-05 1.3E-09 58.9 1.6 59 85-149 1-63 (400)
76 4aqs_A Laminin subunit beta-1; 97.3 2.1E-05 7.2E-10 62.6 -0.9 87 36-126 417-525 (525)
77 1nql_B Epidermal growth factor 97.2 0.00013 4.4E-09 39.9 1.7 34 52-85 11-47 (53)
78 3ltf_D Protein spitz; receptor 97.1 0.00014 4.6E-09 40.6 0.9 36 92-128 15-50 (58)
79 3v65_B Low-density lipoprotein 97.1 5.1E-05 1.7E-09 57.9 -1.3 61 83-149 2-67 (386)
80 3asi_A Neurexin-1-alpha; beta- 97.0 0.00071 2.4E-08 52.0 5.0 70 80-155 181-258 (410)
81 3e50_C Protransforming growth 97.0 0.00079 2.7E-08 36.2 3.6 34 91-128 14-47 (50)
82 2fd6_A Urokinase-type plasmino 97.0 0.00091 3.1E-08 43.0 4.2 57 54-126 2-63 (122)
83 1g1s_A P-selectin; selectin, l 97.0 0.00041 1.4E-08 46.4 2.7 42 47-89 119-161 (162)
84 1n7d_A LDL receptor, low-densi 96.9 0.00059 2E-08 56.1 3.5 60 83-149 293-357 (699)
85 1q4g_A Prostaglandin G/H synth 96.7 0.00064 2.2E-08 54.4 2.6 39 84-128 2-42 (553)
86 2jkh_L Factor X light chain; p 96.7 0.00059 2E-08 37.5 1.5 40 85-131 2-46 (55)
87 3qcw_A Neurexin-1-alpha; synap 96.7 0.0022 7.7E-08 55.9 5.6 70 80-155 1013-1090(1245)
88 1q4g_A Prostaglandin G/H synth 96.6 0.00087 3E-08 53.7 2.3 37 47-83 2-41 (553)
89 1iox_A Betacellulin; EGF-like 96.6 0.0011 3.6E-08 35.7 2.0 33 92-128 15-47 (50)
90 3zyj_B Netrin-G1; cell adhesio 96.6 0.00084 2.9E-08 51.9 2.1 84 29-126 305-398 (426)
91 3nt1_A Prostaglandin-endoperox 96.5 0.0011 3.7E-08 53.4 2.6 39 84-127 1-40 (587)
92 1gl4_A Nidogen-1, entactin; im 96.5 0.00023 7.9E-09 52.1 -1.2 44 83-131 4-50 (285)
93 3m0c_C LDL receptor, low-densi 96.5 0.0011 3.7E-08 55.3 2.3 47 98-149 325-375 (791)
94 1apq_A Complement protease C1R 96.4 0.0023 7.8E-08 34.5 2.8 23 92-121 21-43 (53)
95 2kl7_A Fibulin-4; secreted, ca 96.4 0.0029 1E-07 36.6 3.3 33 83-120 2-36 (71)
96 3cfw_A L-selectin; EGF, cell a 96.4 0.002 6.8E-08 43.1 2.9 40 86-131 121-160 (164)
97 2rnl_A Amphiregulin; AR, color 96.4 0.0055 1.9E-07 32.9 4.1 38 85-126 10-49 (50)
98 3qcw_A Neurexin-1-alpha; synap 96.2 0.0029 1E-07 55.2 3.5 65 85-155 620-689 (1245)
99 3nt1_A Prostaglandin-endoperox 96.1 0.0027 9.4E-08 51.1 2.8 36 47-82 1-39 (587)
100 1kli_L Factor VIIA; extrinsic 96.0 0.0023 7.9E-08 36.8 1.5 42 83-131 4-51 (69)
101 2p28_B Integrin beta-2; hybrid 95.9 0.004 1.4E-07 43.9 2.6 60 54-126 97-175 (217)
102 1xdt_R Hbegf, heparin-binding 95.9 0.003 1E-07 37.2 1.6 37 85-126 38-77 (79)
103 3ltf_D Protein spitz; receptor 95.6 0.0032 1.1E-07 34.9 0.8 30 54-83 15-49 (58)
104 2ygo_A WIF-1, WNT inhibitory f 95.5 0.013 4.4E-07 40.2 3.7 33 85-127 149-181 (188)
105 2fd6_A Urokinase-type plasmino 95.4 0.0093 3.2E-07 38.1 2.7 32 92-128 2-36 (122)
106 2jkh_L Factor X light chain; p 95.3 0.016 5.3E-07 31.6 3.0 17 59-75 14-30 (55)
107 1g1t_A E-selectin; EGF, adhesi 95.3 0.0041 1.4E-07 41.1 0.7 37 85-127 120-156 (157)
108 1apq_A Complement protease C1R 95.1 0.02 7E-07 30.6 3.1 23 53-76 20-42 (53)
109 2wg3_C Hedgehog-interacting pr 94.9 0.0052 1.8E-07 48.1 0.2 43 37-82 408-455 (463)
110 1g1t_A E-selectin; EGF, adhesi 94.8 0.012 4.2E-07 38.7 2.0 37 47-83 119-156 (157)
111 1klo_A Laminin; glycoprotein; 94.8 0.022 7.4E-07 38.2 3.1 17 110-126 74-91 (162)
112 1kig_L Factor XA; glycoprotein 94.8 0.0072 2.5E-07 32.5 0.6 29 98-131 11-43 (51)
113 3cfw_A L-selectin; EGF, cell a 94.7 0.032 1.1E-06 37.1 3.7 40 48-88 120-160 (164)
114 2bz6_L Blood coagulation facto 94.6 0.013 4.3E-07 31.8 1.3 29 98-131 12-45 (53)
115 1xdt_R Hbegf, heparin-binding 94.0 0.012 4.1E-07 34.6 0.5 36 47-82 37-77 (79)
116 1szb_A Mannose binding lectin- 94.0 0.012 4.3E-07 39.5 0.5 46 73-125 113-166 (170)
117 2rnl_A Amphiregulin; AR, color 93.9 0.053 1.8E-06 29.0 2.9 29 53-81 18-48 (50)
118 2i9a_A Urokinase-type plasmino 93.9 0.065 2.2E-06 35.3 3.8 35 54-88 14-53 (145)
119 3e50_C Protransforming growth 93.3 0.088 3E-06 28.1 3.1 29 53-81 14-44 (50)
120 1kli_L Factor VIIA; extrinsic 93.3 0.079 2.7E-06 30.2 3.1 17 59-75 18-35 (69)
121 3asi_A Neurexin-1-alpha; beta- 93.0 0.077 2.6E-06 40.6 3.6 37 47-83 185-223 (410)
122 2i9a_A Urokinase-type plasmino 92.9 0.065 2.2E-06 35.3 2.7 33 92-127 14-47 (145)
123 1iox_A Betacellulin; EGF-like 92.7 0.056 1.9E-06 28.8 1.7 31 53-83 14-46 (50)
124 1ob1_C Major merozoite surface 91.9 0.31 1.1E-05 29.8 4.5 58 59-120 17-83 (99)
125 1gl4_A Nidogen-1, entactin; im 91.6 0.059 2E-06 39.4 1.3 30 18-47 6-38 (285)
126 1n1i_A Merozoite surface prote 91.6 1 3.4E-05 27.8 6.6 71 50-125 13-94 (105)
127 2bz6_L Blood coagulation facto 91.5 0.17 5.7E-06 27.2 2.8 17 59-75 12-29 (53)
128 2kl7_A Fibulin-4; secreted, ca 91.3 0.21 7.1E-06 28.6 3.2 12 29-40 18-29 (71)
129 2wph_E Coagulation factor IXA 90.3 0.15 5.1E-06 28.1 1.9 37 98-142 12-53 (59)
130 4aqs_A Laminin subunit beta-1; 88.2 0.1 3.5E-06 41.4 0.3 18 109-126 458-475 (525)
131 1klo_A Laminin; glycoprotein; 85.3 0.52 1.8E-05 31.3 2.5 32 92-126 2-34 (162)
132 1nzi_A Complement C1S componen 85.1 0.32 1.1E-05 31.9 1.4 32 82-120 115-148 (159)
133 2ygo_A WIF-1, WNT inhibitory f 84.5 0.74 2.5E-05 31.5 2.9 27 53-82 153-180 (188)
134 1szb_A Mannose binding lectin- 82.4 0.92 3.1E-05 30.1 2.8 29 47-76 124-157 (170)
135 3v64_C Agrin; beta propeller, 82.4 1.1 3.7E-05 33.3 3.4 36 85-127 2-41 (349)
136 2e26_A Reelin, reeler protein; 81.9 0.21 7.1E-06 41.1 -0.7 46 70-127 521-566 (725)
137 3zyj_B Netrin-G1; cell adhesio 79.1 0.39 1.3E-05 37.1 0.0 32 47-81 363-397 (426)
138 4aqt_A Laminin subunit gamma-1 72.0 0.47 1.6E-05 36.1 -1.2 18 109-126 332-350 (375)
139 3f1s_B Vitamin K-dependent pro 71.8 1.7 5.7E-05 31.3 1.7 28 98-130 16-47 (283)
140 1nzi_A Complement C1S componen 68.7 4.6 0.00016 26.1 3.3 29 47-76 117-148 (159)
141 3f1s_B Vitamin K-dependent pro 60.9 5.2 0.00018 28.6 2.6 28 20-47 5-34 (283)
142 3v64_C Agrin; beta propeller, 58.5 3.2 0.00011 30.7 1.1 17 29-45 13-29 (349)
143 1h30_A GAS6, growth-arrest-spe 53.8 3.2 0.00011 31.7 0.4 25 131-155 44-70 (422)
144 3fby_A COMP, cartilage oligome 53.0 9.5 0.00032 30.5 2.9 37 85-125 19-59 (551)
145 2e26_A Reelin, reeler protein; 51.5 3.6 0.00012 34.0 0.4 40 40-83 521-566 (725)
146 1ijq_A LDL receptor, low-densi 48.1 23 0.00077 25.5 4.2 29 47-76 267-306 (316)
147 3sov_A LRP-6, low-density lipo 46.4 18 0.00063 26.2 3.5 17 110-126 289-309 (318)
148 2p26_A Integrin beta-2; hybrid 44.6 14 0.00047 26.9 2.5 43 68-119 208-262 (280)
149 3t5o_A Complement component C6 37.6 21 0.00072 30.3 2.9 39 84-128 497-535 (913)
150 3t5o_A Complement component C6 33.3 40 0.0014 28.6 3.9 29 53-81 503-532 (913)
151 4a0p_A LRP6, LRP-6, low-densit 32.9 22 0.00075 28.7 2.2 37 84-127 265-307 (628)
152 4a0p_A LRP6, LRP-6, low-densit 29.2 25 0.00086 28.3 2.0 29 19-47 267-297 (628)
153 2y38_A Laminin subunit alpha-5 28.0 67 0.0023 24.6 4.0 18 109-126 355-373 (403)
154 3s94_A LRP-6, low-density lipo 27.8 29 0.00099 27.9 2.1 20 55-75 588-607 (619)
No 1
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.73 E-value=3.9e-17 Score=108.44 Aligned_cols=107 Identities=27% Similarity=0.749 Sum_probs=88.1
Q ss_pred CceecCCCcc---eeEEcCCceEEEcCCCCcc-------CCCCCCCCCCC-eeEeCCCCeeeeCCCCCCCCCceecCCCC
Q psy11060 19 QFSIGTNSVL---NVIMLKSDYRLIIRPLYSL-------CPCAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGC 87 (155)
Q Consensus 19 ~~~~~~~~~~---~c~~~~~~~~C~C~~g~~~-------~~C~~~~c~~~-~C~~~~~~~~c~C~~g~~g~~c~~~~~~C 87 (155)
.|..+.+++. .|++..++|.|.|++||.+ ++|...||.++ +|++..+.|.|.|++||.|..|+.++++|
T Consensus 7 eC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~~~~~C 86 (135)
T 2vj3_A 7 ECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEVNTDEC 86 (135)
T ss_dssp TTTSSSCSSSTTCEEEECSSSEEEECCTTEESTTSCEECCTTTTCCCCSSCEEEECSSCEEEECCTTEESSSSCEECCTT
T ss_pred cccCCCCCCCCCCEeECCCCCEEEECCCCCcCCcccccCccCCCCCCCCCCEEeCCCCCceeeCCCCCcCCcceecCCcc
Confidence 3444444443 5899999999999999984 44556788775 99999999999999999999998888999
Q ss_pred CCCCCCCCCCeeecCccCCCCCCeEeeCCCCCCCCCCC-cCcccc
Q psy11060 88 VGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICE-KITTMS 131 (155)
Q Consensus 88 ~~~~~c~~~~~C~~~~~~~~~~~~~C~C~~g~~g~~C~-~~~~~~ 131 (155)
... +|.+++.|. +..++|.|.|++||+|..|+ +++++.
T Consensus 87 ~~~-~C~~~g~C~-----~~~g~~~C~C~~G~~G~~C~~~i~~C~ 125 (135)
T 2vj3_A 87 ASS-PCLHNGRCL-----DKINEFQCECPTGFTGHLCQVDLHHIL 125 (135)
T ss_dssp TTC-CSTTTCEEE-----ECSSCEEEECCTTEESSSSCEECC---
T ss_pred cCC-CcCCCCEeE-----CCCCCeEEECCCCCcCCccCccCcccc
Confidence 888 999999999 67889999999999999997 466664
No 2
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.59 E-value=4.8e-15 Score=99.06 Aligned_cols=96 Identities=25% Similarity=0.673 Sum_probs=77.2
Q ss_pred eeEEcC--CceEEEcCCCCccCCC-------------------CCCCCCCC-eeE-------eCCCCeeeeCCCCCCCCC
Q psy11060 29 NVIMLK--SDYRLIIRPLYSLCPC-------------------AYSPCKHG-SCV-------DKRAGYFCDCPPTYGGKN 79 (155)
Q Consensus 29 ~c~~~~--~~~~C~C~~g~~~~~C-------------------~~~~c~~~-~C~-------~~~~~~~c~C~~g~~g~~ 79 (155)
.|++.. ++|.|.|++||++..| ...||.++ +|+ +..+.|.|.|++||.|..
T Consensus 13 ~C~~~~~~g~~~C~C~~G~~G~~C~~~~~~~~~~~~c~~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~C~C~~G~~G~~ 92 (143)
T 4d90_A 13 ICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCEISEAYRGDTFIGYVCKCPRGFNGIH 92 (143)
T ss_dssp EEEC-----CCEEECCTTCCTTTTCSCCCCTTTTTSCCCCCTTSSCCCCTTCEEEECCCEETTEECCEEEECCTTEESTT
T ss_pred EeeCCCCCCCEEeECCCCCCCCCCccCccccccccccccCCcCCCCCCCCCCEecCCCccccCCCCCeEeECcCCCcCCC
Confidence 466554 6799999999985444 45678775 998 445689999999999999
Q ss_pred ceecCCCCCCCCCCCCCCeeecCccCCCCCCeEeeCCCCCCCCCCCcCccc
Q psy11060 80 CSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICEKITTM 130 (155)
Q Consensus 80 c~~~~~~C~~~~~c~~~~~C~~~~~~~~~~~~~C~C~~g~~g~~C~~~~~~ 130 (155)
|+.++++|... +|.+++.|+ +..++|.|.|++||+|..|+.....
T Consensus 93 C~~~i~~C~~~-~C~~~~~C~-----~~~g~~~C~C~~G~~G~~c~~~~~~ 137 (143)
T 4d90_A 93 CQHNINECEVE-PCKNGGICT-----DLVANYSCECPGEFMGRNCQYKGGG 137 (143)
T ss_dssp SCEECCTTTTC-CSCTTCEEE-----EETTEEEEECCTTCBSTTSCBC---
T ss_pred cccCCCcCCCC-CCCCCCEeE-----CCCCCeEeECCCCCccCCceecCCE
Confidence 98789999987 999999999 7788999999999999999876543
No 3
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=99.46 E-value=3.2e-14 Score=88.12 Aligned_cols=83 Identities=29% Similarity=0.661 Sum_probs=67.1
Q ss_pred ceEEEcCCCCccCCCCCCCCCCCeeEeCCCCeeeeCCCCCCCCCce-ecCCCCCCCCCCCCCCeeecCccCCCC--CCeE
Q psy11060 36 DYRLIIRPLYSLCPCAYSPCKHGSCVDKRAGYFCDCPPTYGGKNCS-VELTGCVGPDTCLNGGTCKPYLVDETQ--HRFN 112 (155)
Q Consensus 36 ~~~C~C~~g~~~~~C~~~~c~~~~C~~~~~~~~c~C~~g~~g~~c~-~~~~~C~~~~~c~~~~~C~~~~~~~~~--~~~~ 112 (155)
+|.|.|.+||.+..|....|....|++..+.|.|.|+++|. .|+ .++++|... ||.+++.|+ +.. ++|.
T Consensus 1 sy~C~C~~g~~g~~c~~~~c~~~pC~n~~~~y~C~C~~G~~--~C~~~~~~~C~~~-pC~ngg~C~-----~~~~~~~~~ 72 (91)
T 1tpg_A 1 SYQVICRDEKTQMIYQQHQSWLRPVLRSNRVEYCWCNSGRA--QCHSVPVKSCSEP-RCFNGGTCQ-----QALYFSDFV 72 (91)
T ss_dssp CCCCCCBCSSSCCBCCSSCEEEEECSSSSCEEEEECSSSCC--BCCEECEEECSSC-CSCTTCEEE-----EESSSSCEE
T ss_pred CeeeECCCCCcCCeECCCcccCCccccCCCCcEeECCCCCc--ccccCcCCcccCC-CCCCCCEee-----cCCCCCCeE
Confidence 47899999999776654444222455567789999999997 786 577899988 999999998 555 7899
Q ss_pred eeCCCCCCCCCCCc
Q psy11060 113 CTCPSGYHGKICEK 126 (155)
Q Consensus 113 C~C~~g~~g~~C~~ 126 (155)
|.|++||+|..|+.
T Consensus 73 C~C~~G~~G~~Ce~ 86 (91)
T 1tpg_A 73 CQCPEGFAGKSCEI 86 (91)
T ss_dssp EECCTTCBSSSCCB
T ss_pred eECCCCCcCCcCCc
Confidence 99999999999984
No 4
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.41 E-value=5.4e-13 Score=88.34 Aligned_cols=93 Identities=29% Similarity=0.739 Sum_probs=76.7
Q ss_pred cCCCC--CCCCCCC-eeEeCCCCeeeeCCCCCCCCCceecCCCCCCCCCCCCCCeeecCccCCCCCCeEeeCCCCCCCCC
Q psy11060 47 LCPCA--YSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKI 123 (155)
Q Consensus 47 ~~~C~--~~~c~~~-~C~~~~~~~~c~C~~g~~g~~c~~~~~~C~~~~~c~~~~~C~~~~~~~~~~~~~C~C~~g~~g~~ 123 (155)
+++|. .+||.++ +|++..+.|.|.|++||.|..|+.++++|... +|.+++.|. +..++|.|.|++||+|..
T Consensus 5 ideC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~~~~~~C~~~-~C~~~~~C~-----~~~g~~~C~C~~G~~G~~ 78 (135)
T 2vj3_A 5 VDECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECVSN-PCQNDATCL-----DQIGEFQCICMPGYEGVH 78 (135)
T ss_dssp CCTTTSSSCSSSTTCEEEECSSSEEEECCTTEESTTSCEECCTTTTC-CCCSSCEEE-----ECSSCEEEECCTTEESSS
T ss_pred cccccCCCCCCCCCCEeECCCCCEEEECCCCCcCCcccccCccCCCC-CCCCCCEEe-----CCCCCceeeCCCCCcCCc
Confidence 67887 5789875 99999999999999999999998889999988 999999999 678899999999999999
Q ss_pred CC-cCcccccC--CCceEeecCCCC
Q psy11060 124 CE-KITTMSFS--GGSHIMLNTTRE 145 (155)
Q Consensus 124 C~-~~~~~~~~--~~~~~~~~~~~~ 145 (155)
|+ +++++... .....+++.+..
T Consensus 79 C~~~~~~C~~~~C~~~g~C~~~~g~ 103 (135)
T 2vj3_A 79 CEVNTDECASSPCLHNGRCLDKINE 103 (135)
T ss_dssp SCEECCTTTTCCSTTTCEEEECSSC
T ss_pred ceecCCcccCCCcCCCCEeECCCCC
Confidence 97 45666432 223456666543
No 5
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.36 E-value=9e-14 Score=96.81 Aligned_cols=117 Identities=15% Similarity=0.353 Sum_probs=88.8
Q ss_pred eeEEcCCceEEEcCCCCc---------cCCCC----CCCCCCC-eeEeCC-----CCeeeeCCCCCCCCCceecCCCCCC
Q psy11060 29 NVIMLKSDYRLIIRPLYS---------LCPCA----YSPCKHG-SCVDKR-----AGYFCDCPPTYGGKNCSVELTGCVG 89 (155)
Q Consensus 29 ~c~~~~~~~~C~C~~g~~---------~~~C~----~~~c~~~-~C~~~~-----~~~~c~C~~g~~g~~c~~~~~~C~~ 89 (155)
.|++..++|+|.|++||. +++|. ..||.++ +|++.. +.|.|.|++||.|..+.-.+++|..
T Consensus 17 ~C~~~~g~~~C~C~~G~~g~~~~~C~~id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~~~C~~d~C~~ 96 (186)
T 1z1y_A 17 QLVQMSNHFXCMCNEGLVHLSENTCEEXNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXEDTCVLDVCQY 96 (186)
T ss_dssp EEEECSSCEEEEECTTEEEEETTEEEECCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEETTEEEEGGGTT
T ss_pred EeECCCCCeEeECCCCCccCCCCccCCCCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCCCCCCCCcCcC
Confidence 589999999999999997 46676 5678775 999988 8999999999988755434688988
Q ss_pred CCCCCCCCeeecCccCCCCCCeEeeCCCCCCC-----CCCCcC--ccccc-C-CCceEeecCCCCCc
Q psy11060 90 PDTCLNGGTCKPYLVDETQHRFNCTCPSGYHG-----KICEKI--TTMSF-S-GGSHIMLNTTREEG 147 (155)
Q Consensus 90 ~~~c~~~~~C~~~~~~~~~~~~~C~C~~g~~g-----~~C~~~--~~~~~-~-~~~~~~~~~~~~~~ 147 (155)
. +|.+++.|+...+ +..++|.|.|++||+| ..|+++ +++.. - .....|++++..+.
T Consensus 97 ~-~C~~~g~C~~~~~-~~~g~~~C~C~~Gy~g~~~~~~~C~~~~~~~C~~~C~~~~~~C~n~~g~y~ 161 (186)
T 1z1y_A 97 X-NCGESGECIVEYL-SEIQSAGCSCAIGXVPNPEDEXXCTXTGETACQLXCNTDNEVCXNVEGVYX 161 (186)
T ss_dssp C-CCCTTEEEEEEEE-TTEEEEEEEECTEEEEETTTTTEEEEEECCCCCCCCCTTTEEEEEETTEEE
T ss_pred C-CCCCCCEEeeCCc-CCCCCceEECCCCCcccCCCCCcceEcCCCcccccccccCcceecCCCCee
Confidence 8 9998899972111 2456899999999998 788865 56642 1 23556777765443
No 6
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=99.30 E-value=1.9e-12 Score=86.45 Aligned_cols=83 Identities=23% Similarity=0.553 Sum_probs=68.0
Q ss_pred eEEEcCCCCcc---------------CCCCCC---CCCCC-eeEeCCCCeeeeCCCCCCCC------------CceecCC
Q psy11060 37 YRLIIRPLYSL---------------CPCAYS---PCKHG-SCVDKRAGYFCDCPPTYGGK------------NCSVELT 85 (155)
Q Consensus 37 ~~C~C~~g~~~---------------~~C~~~---~c~~~-~C~~~~~~~~c~C~~g~~g~------------~c~~~~~ 85 (155)
|.|.|++||++ ++|... +|.++ .|++..+.|.|.|++||.+. .|+ +++
T Consensus 19 ~~C~C~~G~~g~~~~~~~~~~~C~dideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~~~~~~~~~C~-did 97 (143)
T 2bou_A 19 TACRCNPGFSSFSEIITTPMETCDDINECATLSKVSCGKFSDCWNTEGSYDCVCSPGYEPVSGAKTFKNESENTCQ-DVD 97 (143)
T ss_dssp SCEEECTTEECSSSSBCSTTCCCEECCGGGC----CCCTTEEEEECSSCEEEEECTTEEETTCCSCBSSGGGCCEE-ECC
T ss_pred CEEeCCCCCcCccccccCCCCcCCccccccCCCCCCCCCCCEEEcCCCCeEeECCCCcccCcCccccccCCCCCcC-Ccc
Confidence 89999999974 345443 78775 99999999999999999765 565 788
Q ss_pred CCCCC-CCCCCCCeeecCccCCCCCCeEeeCCCCCCCCCCC
Q psy11060 86 GCVGP-DTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICE 125 (155)
Q Consensus 86 ~C~~~-~~c~~~~~C~~~~~~~~~~~~~C~C~~g~~g~~C~ 125 (155)
+|... ++|.+++.|+ ++.++|.|.|++||+|....
T Consensus 98 eC~~~~~~C~~~~~C~-----n~~g~y~C~C~~Gy~g~~~~ 133 (143)
T 2bou_A 98 ECSSGQHQCDSSTVCF-----NTVGSYSCRCRPGWKPRHGI 133 (143)
T ss_dssp HHHHTCCCCCTTSEEE-----ECSSCEEEECCSSSCBCTTC
T ss_pred CccCcCCCCCCCCEEE-----CCCCCEEeeCCCCcccCCCC
Confidence 88752 4899999999 78899999999999976653
No 7
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=99.28 E-value=8.3e-12 Score=100.73 Aligned_cols=99 Identities=24% Similarity=0.607 Sum_probs=80.8
Q ss_pred ceeEEcCCc-eEE-EcCCCCc--------cCCCCCCC--CCC-C---eeEeCCCCeeee-CCCCCCCCCce---------
Q psy11060 28 LNVIMLKSD-YRL-IIRPLYS--------LCPCAYSP--CKH-G---SCVDKRAGYFCD-CPPTYGGKNCS--------- 81 (155)
Q Consensus 28 ~~c~~~~~~-~~C-~C~~g~~--------~~~C~~~~--c~~-~---~C~~~~~~~~c~-C~~g~~g~~c~--------- 81 (155)
..|++..++ |.| .|++||+ +++|...| |.+ + +|++..++|.|. |++||.|..|+
T Consensus 15 g~C~n~~~Gsy~C~~C~~GytGdg~~CeDiDEC~~~p~~C~~gg~~~~CvNt~gsY~C~~C~~Gy~G~~c~g~g~~~~~~ 94 (634)
T 1yo8_A 15 AQCSSFPDGSWSCGFCPVGFLGNGTHCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPPRYRGNQPVGVGLEAAKT 94 (634)
T ss_dssp CCEEECTTSCEEECCCCTTBCSCSSSCCBCCTTTTSCCCSCCCSSSCCEEECSSSEEECCCCTTEEECCCEESSSHHHHS
T ss_pred CEEecCCCCCeECCcCCCccCCCCCCccccccccCCCCcccCCccccceeeccCceecccCCCCcccCcccccccccccc
Confidence 358888865 999 9999997 46777677 876 4 799999999999 99999877643
Q ss_pred -----ecCCCCCCC-CCCCCCCeeecCccCCCC----CCeEeeCCCCCCC--CCCC---cCcccc
Q psy11060 82 -----VELTGCVGP-DTCLNGGTCKPYLVDETQ----HRFNCTCPSGYHG--KICE---KITTMS 131 (155)
Q Consensus 82 -----~~~~~C~~~-~~c~~~~~C~~~~~~~~~----~~~~C~C~~g~~g--~~C~---~~~~~~ 131 (155)
..+++|... ++|.+++.|+ +.. ++|.|.|++||+| ..|+ .+++|.
T Consensus 95 dg~~C~dideC~~~~~pC~~~~~Cv-----nt~~~~~GsY~C~C~~Gy~GdG~~Ce~d~DiDeC~ 154 (634)
T 1yo8_A 95 EKQVCEPENPCKDKTHNCHKHAECI-----YLGHFSDPMYKCECQTGYAGDGLICGEDSDLDGWP 154 (634)
T ss_dssp CCCCEEECCTTTTTCCCCCTTEEEE-----ECCTTCSSSEEEEECTTEEESSSSEEECTTSSSSC
T ss_pred CCCcccccccccCCCcccccCcccc-----ccccccccceeeeccCCccccCcccccccCccccc
Confidence 468899864 5899999998 666 8999999999996 7886 566664
No 8
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.28 E-value=1.5e-12 Score=90.62 Aligned_cols=95 Identities=19% Similarity=0.406 Sum_probs=79.0
Q ss_pred ceeEEcC-----CceEEEcCCCCc-------cCCCCCCCCCCC-eeE----eCCCCeeeeCCCCCCC-----CCceec-C
Q psy11060 28 LNVIMLK-----SDYRLIIRPLYS-------LCPCAYSPCKHG-SCV----DKRAGYFCDCPPTYGG-----KNCSVE-L 84 (155)
Q Consensus 28 ~~c~~~~-----~~~~C~C~~g~~-------~~~C~~~~c~~~-~C~----~~~~~~~c~C~~g~~g-----~~c~~~-~ 84 (155)
..|++.. ++|.|.|++||. +++|...||.++ .|+ +..+.|.|.|++||.| ..|+.. +
T Consensus 60 ~~C~~~~~~~~~g~y~C~C~~G~~g~~~~C~~d~C~~~~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~~~~C~~~~~ 139 (186)
T 1z1y_A 60 GQCIENPDPAQVNMYXCGCIEGYTLXEDTCVLDVCQYXNCGESGECIVEYLSEIQSAGCSCAIGXVPNPEDEXXCTXTGE 139 (186)
T ss_dssp EEEEECSSTTSSCSEEEEECTTEEEETTEEEEGGGTTCCCCTTEEEEEEEETTEEEEEEEECTEEEEETTTTTEEEEEEC
T ss_pred CEeecCCCCcCCCCEECCCCCCCccCCCCCCCCcCcCCCCCCCCEEeeCCcCCCCCceEECCCCCcccCCCCCcceEcCC
Confidence 3588888 899999999998 357788889875 898 6677899999999987 778743 4
Q ss_pred CCCCCCCCC-CCCCeeecCccCCCCCCeEeeCCCCCCCCCCCcCcc
Q psy11060 85 TGCVGPDTC-LNGGTCKPYLVDETQHRFNCTCPSGYHGKICEKITT 129 (155)
Q Consensus 85 ~~C~~~~~c-~~~~~C~~~~~~~~~~~~~C~C~~g~~g~~C~~~~~ 129 (155)
++|. . +| .+++.|+ +..++|.|.|++||+|..++....
T Consensus 140 ~~C~-~-~C~~~~~~C~-----n~~g~y~C~C~~G~~g~~~~~~~~ 178 (186)
T 1z1y_A 140 TACQ-L-XCNTDNEVCX-----NVEGVYXCQCMEGFTFDXEXNVCL 178 (186)
T ss_dssp CCCC-C-CCCTTTEEEE-----EETTEEEEEECTTCEEETTTTEEE
T ss_pred Cccc-c-cccccCccee-----cCCCCeeeECCCCCccCcccccCC
Confidence 7887 4 79 8889999 788999999999999988876543
No 9
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.25 E-value=7.3e-12 Score=83.45 Aligned_cols=96 Identities=28% Similarity=0.695 Sum_probs=68.6
Q ss_pred CCCCCCCCCCC-eeEeCC--CCeeeeCCCCCCCCCcee------------cCCCCCCCCCCCCCCeeecCcc--CCCCCC
Q psy11060 48 CPCAYSPCKHG-SCVDKR--AGYFCDCPPTYGGKNCSV------------ELTGCVGPDTCLNGGTCKPYLV--DETQHR 110 (155)
Q Consensus 48 ~~C~~~~c~~~-~C~~~~--~~~~c~C~~g~~g~~c~~------------~~~~C~~~~~c~~~~~C~~~~~--~~~~~~ 110 (155)
|+|..+||.++ +|++.. +.|.|.|++||.|..|+. ++++|... +|.+++.|..... .+..++
T Consensus 1 d~C~~~pC~~~g~C~~~~~~g~~~C~C~~G~~G~~C~~~~~~~~~~~~c~~~~~C~~~-~C~~~g~C~~~~~~~~~~~~~ 79 (143)
T 4d90_A 1 DICDPNPCENGGICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPN-PCHNGGTCEISEAYRGDTFIG 79 (143)
T ss_dssp --CCSCCCGGGCEEEC-----CCEEECCTTCCTTTTCSCCCCTTTTTSCCCCCTTSSC-CCCTTCEEEECCCEETTEECC
T ss_pred CcCCCCcCCCCCEeeCCCCCCCEEeECCCCCCCCCCccCccccccccccccCCcCCCC-CCCCCCEecCCCccccCCCCC
Confidence 56888999885 999764 579999999999999874 34667777 8999999972100 013468
Q ss_pred eEeeCCCCCCCCCCC-cCcccccC--CCceEeecCCC
Q psy11060 111 FNCTCPSGYHGKICE-KITTMSFS--GGSHIMLNTTR 144 (155)
Q Consensus 111 ~~C~C~~g~~g~~C~-~~~~~~~~--~~~~~~~~~~~ 144 (155)
|.|.|++||+|..|+ +++++... .....++++..
T Consensus 80 ~~C~C~~G~~G~~C~~~i~~C~~~~C~~~~~C~~~~g 116 (143)
T 4d90_A 80 YVCKCPRGFNGIHCQHNINECEVEPCKNGGICTDLVA 116 (143)
T ss_dssp EEEECCTTEESTTSCEECCTTTTCCSCTTCEEEEETT
T ss_pred eEeECcCCCcCCCcccCCCcCCCCCCCCCCEeECCCC
Confidence 999999999999998 77787633 22446666654
No 10
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=99.15 E-value=2.4e-11 Score=81.43 Aligned_cols=76 Identities=29% Similarity=0.685 Sum_probs=63.7
Q ss_pred cCCCCCCCCCCC-eeEeCCCCeeeeCCCCCCCCCceecCCCCCCC-CCCCCCCee-ecCccCCCCCCeEeeCCCCCC---
Q psy11060 47 LCPCAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGP-DTCLNGGTC-KPYLVDETQHRFNCTCPSGYH--- 120 (155)
Q Consensus 47 ~~~C~~~~c~~~-~C~~~~~~~~c~C~~g~~g~~c~~~~~~C~~~-~~c~~~~~C-~~~~~~~~~~~~~C~C~~g~~--- 120 (155)
+++|..+||.++ +|++..++|.|.|++||.|..|+ ++++|... .+|.+ .| . +..++|.|.|++||+
T Consensus 48 ideC~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~-~~deC~~~~~~C~~--~C~~-----n~~g~y~C~C~~Gy~l~~ 119 (146)
T 1x7a_L 48 GDQCEPNPCLNGGLCKDDINSYECWCQVGFEGKNCE-LDATCNIKNGRCKQ--FCKT-----GADSKVLCSCTTGYRLAP 119 (146)
T ss_dssp --CCSSCSSCTTCEEEECSSCEEEECCSSEESTTTC-EECCTTSGGGSCSS--BCCC-----CSSSCCCCBCCTTEEECT
T ss_pred cCcCCCCCCCCCCEeECCCCCEEEecCCCCcCCcCC-CCccccCCCCCCcC--CCCC-----CCCCCEEeEcCCCcEeCC
Confidence 789999999986 99999999999999999999997 45889865 35665 78 7 788999999999999
Q ss_pred -CCCCCcCccc
Q psy11060 121 -GKICEKITTM 130 (155)
Q Consensus 121 -g~~C~~~~~~ 130 (155)
|..|+++++.
T Consensus 120 dG~~C~~~~~~ 130 (146)
T 1x7a_L 120 DQKSCKPAVPF 130 (146)
T ss_dssp TSSSEEECSSS
T ss_pred CCCcCCCCCCC
Confidence 8999887654
No 11
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=99.13 E-value=1.4e-11 Score=79.68 Aligned_cols=84 Identities=21% Similarity=0.564 Sum_probs=66.9
Q ss_pred eeEEc-CCceEEEcCCCCccC-----CCC----CCCCCCCeeEeCCCCeeeeCCCCCC---CCCceecCCCCCCCCCCCC
Q psy11060 29 NVIML-KSDYRLIIRPLYSLC-----PCA----YSPCKHGSCVDKRAGYFCDCPPTYG---GKNCSVELTGCVGPDTCLN 95 (155)
Q Consensus 29 ~c~~~-~~~~~C~C~~g~~~~-----~C~----~~~c~~~~C~~~~~~~~c~C~~g~~---g~~c~~~~~~C~~~~~c~~ 95 (155)
.|++. .++|.|.|++||.++ +|. ..+|. +.|++ .+.|.|.|++||. |..|+ ++++|...++|
T Consensus 15 ~C~~~~~g~y~C~C~~Gy~g~~~~~~~C~~~C~~~~C~-~~C~~-~~~y~C~C~~Gy~~~~g~~C~-dideC~~~~~C-- 89 (118)
T 1dx5_I 15 QCQPLDQTSYLCVCAEGFAPIPHEPHRCQMFCNQTACP-ADCDP-NTQASCECPEGYILDDGFICT-DIDECENGGFC-- 89 (118)
T ss_dssp EEEECSSSCEEEECCTTEEEETTEEEEEEECCCSSEEE-CEECT-TSTTCEECCTTEEEETTTEEE-ECCHHHHCSSC--
T ss_pred CCCCCCCCCEEeECCCCccccCCCCCccccccCCCCCC-CcccC-CCCeEeECCCCccCCCCCccc-cccccCCCCCC--
Confidence 68999 899999999999854 332 33343 26766 5789999999998 88895 88999872388
Q ss_pred CCeeecCccCCCCCCeEeeCCCCCCCC
Q psy11060 96 GGTCKPYLVDETQHRFNCTCPSGYHGK 122 (155)
Q Consensus 96 ~~~C~~~~~~~~~~~~~C~C~~g~~g~ 122 (155)
.+.|+ +..++|.|.|++||++.
T Consensus 90 ~~~C~-----n~~g~y~C~C~~G~~g~ 111 (118)
T 1dx5_I 90 SGVCH-----NLPGTFECICGPDSALA 111 (118)
T ss_dssp SSEEE-----ECSSSEEEEECSSSSCE
T ss_pred cCeEE-----eCCCCEEEECCCCCccC
Confidence 67898 78899999999999853
No 12
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=99.12 E-value=2.9e-11 Score=80.62 Aligned_cols=77 Identities=34% Similarity=0.763 Sum_probs=63.4
Q ss_pred cCCCCCCCCCCC-eeEeCCCCeeeeCCCCCCCCCceecCCCCCCCCCCCCCC---eeecCccCCCCC-CeEeeCCCCCC-
Q psy11060 47 LCPCAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGG---TCKPYLVDETQH-RFNCTCPSGYH- 120 (155)
Q Consensus 47 ~~~C~~~~c~~~-~C~~~~~~~~c~C~~g~~g~~c~~~~~~C~~~~~c~~~~---~C~~~~~~~~~~-~~~C~C~~g~~- 120 (155)
+++|..+||.++ +|++..++|.|.|++||.|..|+..+++|..- ++.+++ .|. +..+ +|.|.|++||+
T Consensus 47 id~C~~~pC~n~g~C~~~~g~y~C~C~~G~~G~~C~~~~~~c~~c-~~~~~~C~~~C~-----~~~g~~y~C~C~~Gy~l 120 (142)
T 2c4f_L 47 GDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCETHKDDQLIC-VNENGGCEQYCS-----DHTGTKRSCRCHEGYSL 120 (142)
T ss_dssp CCGGGGCCCCTTCEEEEETTEEEEECCTTEESTTSCEEGGGCCST-TTGGGGCSSEEE-----CCTTSCCEEECCTTEEE
T ss_pred cCcCcCCCcCCCCEEeCCCCCEEeeCCCCccCCccccCccccccc-cCCCCCccCEeE-----CCCCCCEEEECCCCceE
Confidence 688988999986 99999999999999999999998655565333 344444 898 7778 99999999999
Q ss_pred ---CCCCCcCcc
Q psy11060 121 ---GKICEKITT 129 (155)
Q Consensus 121 ---g~~C~~~~~ 129 (155)
|..|+++++
T Consensus 121 ~~dG~~C~~~~e 132 (142)
T 2c4f_L 121 LADGVSCTPTVE 132 (142)
T ss_dssp CTTSSCEEESSS
T ss_pred CCCCCCCCCCCc
Confidence 899988776
No 13
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=99.12 E-value=6.2e-11 Score=71.74 Aligned_cols=70 Identities=36% Similarity=0.885 Sum_probs=58.4
Q ss_pred cCCCCC-CCCCCCeeEeCCCCeeeeCCCCCC--CCCceecCCCCCCCCCCCCCCeeecCccCCCCCCeEeeCCCCCCCCC
Q psy11060 47 LCPCAY-SPCKHGSCVDKRAGYFCDCPPTYG--GKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKI 123 (155)
Q Consensus 47 ~~~C~~-~~c~~~~C~~~~~~~~c~C~~g~~--g~~c~~~~~~C~~~~~c~~~~~C~~~~~~~~~~~~~C~C~~g~~g~~ 123 (155)
+++|.. .||.++.|++..++|.|.|++||. |..|+ ++++|...++|.+ +.|. +..++|.|.|++||++..
T Consensus 5 ideC~~~~~C~~g~C~n~~g~y~C~C~~Gy~~~g~~C~-dideC~~~~~C~~-~~C~-----n~~g~y~C~C~~G~~g~~ 77 (82)
T 1emn_A 5 MDECKEPDVCKHGQCINTDGSYRCECPFGYILAGNECV-DTDECSVGNPCGN-GTCK-----NVIGGFECTCEEGFEPGP 77 (82)
T ss_dssp CCSSSSTTSCSSSEECCCSSCCCEECCTTEEEETTEEE-ECCGGGTCCTTSS-SCEE-----ECSSSEEECCSSSSCCCS
T ss_pred cccCCCCCCcCCCEEEecCCCEEEECCCCeECCCCccC-CcccccCCCCCCC-CEeE-----CCCCCEEeECCCCeEeCC
Confidence 577875 788777999999999999999996 88895 7899973338986 4898 788999999999998643
No 14
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.08 E-value=3e-11 Score=82.85 Aligned_cols=83 Identities=35% Similarity=0.809 Sum_probs=65.8
Q ss_pred ceEEEcCCCCccCCCC---CCC-CCCCeeEeCCCCeeeeCCCCCCCCCceecCCCCCCCCCCCCCCeeecCccCCC-CCC
Q psy11060 36 DYRLIIRPLYSLCPCA---YSP-CKHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDET-QHR 110 (155)
Q Consensus 36 ~~~C~C~~g~~~~~C~---~~~-c~~~~C~~~~~~~~c~C~~g~~g~~c~~~~~~C~~~~~c~~~~~C~~~~~~~~-~~~ 110 (155)
.+.|.|.+||.+..|. ..+ |.+++|+ +.+.|.|.++|.|..|+.++++|....+|.+++.|. +. .++
T Consensus 82 ~~~C~C~~G~~G~~C~~C~~~~~C~~g~C~---~~~~C~C~~G~~G~~C~~~~~~C~~~~~C~~~g~C~-----~~~~~~ 153 (169)
T 2vj2_A 82 PGDCRCQYGWQGLYCDKCIPHPGCVHGICN---EPWQCLCETNWGGQLCDKDLNYCGTHQPCLNGGTCS-----NTGPDK 153 (169)
T ss_dssp TTCCEECTTEESSSSCEECCCTTCSSEECS---STTCCEECTTEETTTTCEESCHHHHTCCCCTTCEEE-----ECSTTC
T ss_pred CCeeECCCCCCCCCcccCCCCCCCCCCCcC---CCCEEeCCCCCCCCcccCCCCCCCCCCCCCCCCEEc-----CCCCCC
Confidence 4788888888876664 334 6655665 468999999999999987788887522899999998 54 678
Q ss_pred eEeeCCCCCCCCCCCc
Q psy11060 111 FNCTCPSGYHGKICEK 126 (155)
Q Consensus 111 ~~C~C~~g~~g~~C~~ 126 (155)
|.|.|++||+|..|+.
T Consensus 154 ~~C~C~~G~~G~~Ce~ 169 (169)
T 2vj2_A 154 YQCSCPEGYSGPNCEI 169 (169)
T ss_dssp EEEECCTTCCSTTSCC
T ss_pred cEeECCCCCcCcCcCC
Confidence 9999999999999863
No 15
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=99.06 E-value=1.9e-11 Score=85.49 Aligned_cols=75 Identities=33% Similarity=0.735 Sum_probs=30.7
Q ss_pred cCCCCCCCCCCC-eeEeCCCCeeeeCCCCCCCCCceecC-CCCCCC-CCCCCCCeeecCccCCCCCCeEeeCCCCCC---
Q psy11060 47 LCPCAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVEL-TGCVGP-DTCLNGGTCKPYLVDETQHRFNCTCPSGYH--- 120 (155)
Q Consensus 47 ~~~C~~~~c~~~-~C~~~~~~~~c~C~~g~~g~~c~~~~-~~C~~~-~~c~~~~~C~~~~~~~~~~~~~C~C~~g~~--- 120 (155)
+++|..+||.++ +|++..++|.|.|++||.|..|+..+ ++|... .+|.+ .|. +..++|.|.|++||+
T Consensus 42 ideC~~~pC~ngg~C~n~~g~y~C~C~~Gf~G~~Ce~~i~deC~~~~~~C~~--~C~-----n~~gsy~C~C~~Gy~l~~ 114 (195)
T 1nfu_B 42 GDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQ--FCH-----EEQNSVVCSCARGYTLAD 114 (195)
T ss_dssp ---------------------------------------CCGGGTGGGGCSS--EEE-----EETTEEEEECCTTEEECT
T ss_pred CcccCCCCCCCCCEeECCCCCeeEeCCCCceeccccccccccccCCCCCCCC--EeE-----CCCCCeEEECCCCceeCC
Confidence 789999999986 99999999999999999999998656 779764 35765 898 788999999999999
Q ss_pred -CCCCCcCc
Q psy11060 121 -GKICEKIT 128 (155)
Q Consensus 121 -g~~C~~~~ 128 (155)
|..|++++
T Consensus 115 dG~~C~~~~ 123 (195)
T 1nfu_B 115 NGKACIPTG 123 (195)
T ss_dssp TSSCEEESS
T ss_pred CCCccccCC
Confidence 99998765
No 16
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=99.04 E-value=8.6e-11 Score=71.74 Aligned_cols=69 Identities=33% Similarity=0.870 Sum_probs=56.4
Q ss_pred cCCCCCCC--CCCCeeEeCCCCeeeeCCCCCC-----CCCceecCCCCCCC-CCCCCCCeeecCccCCCCCCeEeeCCCC
Q psy11060 47 LCPCAYSP--CKHGSCVDKRAGYFCDCPPTYG-----GKNCSVELTGCVGP-DTCLNGGTCKPYLVDETQHRFNCTCPSG 118 (155)
Q Consensus 47 ~~~C~~~~--c~~~~C~~~~~~~~c~C~~g~~-----g~~c~~~~~~C~~~-~~c~~~~~C~~~~~~~~~~~~~C~C~~g 118 (155)
+++|...| |.++.|++..++|.|.|++||. |..|+ ++++|... ..|. .+.|+ ++.++|.|.|++|
T Consensus 3 ideC~~~~~~C~~g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~-dideC~~~~~~C~-~~~C~-----n~~g~y~C~C~~G 75 (86)
T 1lmj_A 3 IDECRISPDLCGRGQCVNTPGDFECKCDEGYESGFMMMKNCM-DIDECQRDPLLCR-GGVCH-----NTEGSYRCECPPG 75 (86)
T ss_dssp CCTTTTCSSTTTTSCEEEETTEEEECCCSSEEECTTTSSSEE-ECCHHHHCSSTTT-TSEEE-----EETTEEEEESCTT
T ss_pred cccccCCCCCCCCCEEECCCCCEEeeCCCCcCccCCCCCccC-CcccccCCCCcCC-CCEeE-----cCCCCEEEECcCC
Confidence 57787655 8666899999999999999996 77886 88999766 2365 46999 7889999999999
Q ss_pred CCCC
Q psy11060 119 YHGK 122 (155)
Q Consensus 119 ~~g~ 122 (155)
|++.
T Consensus 76 ~~~~ 79 (86)
T 1lmj_A 76 HQLS 79 (86)
T ss_dssp SCCC
T ss_pred cccC
Confidence 9864
No 17
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=99.03 E-value=3e-11 Score=79.78 Aligned_cols=76 Identities=33% Similarity=0.725 Sum_probs=30.3
Q ss_pred cCCCCCCCCCCC-eeEeCCCCeeeeCCCCCCCCCceecC-CCCCCC-CCCCCCCeeecCccCCCCCCeEeeCCCCCC---
Q psy11060 47 LCPCAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVEL-TGCVGP-DTCLNGGTCKPYLVDETQHRFNCTCPSGYH--- 120 (155)
Q Consensus 47 ~~~C~~~~c~~~-~C~~~~~~~~c~C~~g~~g~~c~~~~-~~C~~~-~~c~~~~~C~~~~~~~~~~~~~C~C~~g~~--- 120 (155)
+++|..+||.++ +|++..++|.|.|++||.|..|+..+ ++|... .+|.+ .|. +..++|.|.|++||+
T Consensus 42 ~d~C~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~i~d~C~~~~~~C~~--~C~-----~~~g~y~C~C~~Gy~l~~ 114 (134)
T 2vh0_B 42 GDQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQ--FCH-----EEQNSVVCSCARGYTLAD 114 (134)
T ss_dssp ---------------------------------------CCGGGTGGGGCSS--EEE-----EETTEEEEECCTTEEECT
T ss_pred cCcCCCCCCCCcCCcccCCCCEEeeCCCCccCCccccCCCCccccCCCCCCC--EeE-----CCCCCEEEECCCCcEECC
Confidence 788998999885 99998899999999999999998656 778764 35765 898 778899999999999
Q ss_pred -CCCCCcCcc
Q psy11060 121 -GKICEKITT 129 (155)
Q Consensus 121 -g~~C~~~~~ 129 (155)
|..|+++++
T Consensus 115 ~g~~C~~~~~ 124 (134)
T 2vh0_B 115 NGKACIPTGP 124 (134)
T ss_dssp TSSCEEESSS
T ss_pred CCCccCcCCC
Confidence 889977654
No 18
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=99.00 E-value=4.6e-10 Score=83.88 Aligned_cols=77 Identities=36% Similarity=0.850 Sum_probs=65.3
Q ss_pred cCCCCCCCCCCC-eeEeCCCCeeeeCCCCCCCCCceecCCCCCCC--CCCCCCCeeecCccCCCCCCeEeeCCCCCCC--
Q psy11060 47 LCPCAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGP--DTCLNGGTCKPYLVDETQHRFNCTCPSGYHG-- 121 (155)
Q Consensus 47 ~~~C~~~~c~~~-~C~~~~~~~~c~C~~g~~g~~c~~~~~~C~~~--~~c~~~~~C~~~~~~~~~~~~~C~C~~g~~g-- 121 (155)
+++|..+||.++ .|++..+.|.|.|++||.|..|+.++++|... .+|.+ .|. +..++|.|.|++||++
T Consensus 5 ~~~C~~~pC~~~g~C~~~~~~~~C~C~~g~~g~~C~~~~~eC~~~~~~~C~~--~C~-----~~~g~~~C~C~~g~~~~~ 77 (317)
T 3h5c_B 5 GSPCISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCELAKNECHPERTDGCQH--FCL-----PGQESYTCSCAQGYRLGE 77 (317)
T ss_dssp -CCTTSCCCTTTCCCCCCSSSCCCCCSSSCCSSSSCCCSSSCCTTCTTSCSS--EEE-----CCSSSCEEECCTTEECCT
T ss_pred CCcCCCCCCCCCCEeECCCCCeEEECCCCCcCCccccCcccCCCCCCCCCcC--ccc-----cCCCeeEEeccccccccc
Confidence 688999999986 99988899999999999999998889999871 38987 898 7889999999999985
Q ss_pred --CCCCcCccc
Q psy11060 122 --KICEKITTM 130 (155)
Q Consensus 122 --~~C~~~~~~ 130 (155)
..|...+++
T Consensus 78 ~~~~C~~~~~c 88 (317)
T 3h5c_B 78 DHKQCVPHDQC 88 (317)
T ss_dssp TSSCCEECSSC
T ss_pred ccccccccccc
Confidence 457666555
No 19
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=98.99 E-value=4e-10 Score=91.00 Aligned_cols=90 Identities=27% Similarity=0.608 Sum_probs=72.9
Q ss_pred cCCCCCCCCCCC-eeEeCCC-Ceee-eCCCCCCC--CCceecCCCCCCCCC--CCCCC---eeecCccCCCCCCeEee-C
Q psy11060 47 LCPCAYSPCKHG-SCVDKRA-GYFC-DCPPTYGG--KNCSVELTGCVGPDT--CLNGG---TCKPYLVDETQHRFNCT-C 115 (155)
Q Consensus 47 ~~~C~~~~c~~~-~C~~~~~-~~~c-~C~~g~~g--~~c~~~~~~C~~~~~--c~~~~---~C~~~~~~~~~~~~~C~-C 115 (155)
+++|..+||.++ +|++..+ +|+| .|++||.| ..|+ .+++|... + |.+++ .|+ +..++|.|. |
T Consensus 3 IDeC~~nPC~~gg~C~n~~~Gsy~C~~C~~GytGdg~~Ce-DiDEC~~~-p~~C~~gg~~~~Cv-----Nt~gsY~C~~C 75 (634)
T 1yo8_A 3 PDGCLSNPCFPGAQCSSFPDGSWSCGFCPVGFLGNGTHCE-DLDECALV-PDICFSTSKVPRCV-----NTQPGFHCLPC 75 (634)
T ss_dssp -CGGGGCCSCTTCCEEECTTSCEEECCCCTTBCSCSSSCC-BCCTTTTS-CCCSCCCSSSCCEE-----ECSSSEEECCC
T ss_pred ccccCCCCCCCCCEEecCCCCCeECCcCCCccCCCCCCcc-ccccccCC-CCcccCCcccccee-----eccCceecccC
Confidence 577888999886 9999875 4999 99999987 7896 88999877 6 99988 899 788999998 9
Q ss_pred CCCCCCCC---------------CCcCcccccC----CCceEeecCC
Q psy11060 116 PSGYHGKI---------------CEKITTMSFS----GGSHIMLNTT 143 (155)
Q Consensus 116 ~~g~~g~~---------------C~~~~~~~~~----~~~~~~~~~~ 143 (155)
++||+|.. |+.+++|... .....|++++
T Consensus 76 ~~Gy~G~~c~g~g~~~~~~dg~~C~dideC~~~~~pC~~~~~Cvnt~ 122 (634)
T 1yo8_A 76 PPRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAECIYLG 122 (634)
T ss_dssp CTTEEECCCEESSSHHHHSCCCCEEECCTTTTTCCCCCTTEEEEECC
T ss_pred CCCcccCccccccccccccCCCcccccccccCCCcccccCccccccc
Confidence 99999776 5567777642 2246788876
No 20
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=98.98 E-value=4.8e-10 Score=62.41 Aligned_cols=55 Identities=27% Similarity=0.568 Sum_probs=40.5
Q ss_pred CCCceecCCCCCCCCCCCCCCeeecCccCCCCCCeEeeCCCCCCCCCCCcCccccc
Q psy11060 77 GKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICEKITTMSF 132 (155)
Q Consensus 77 g~~c~~~~~~C~~~~~c~~~~~C~~~~~~~~~~~~~C~C~~g~~g~~C~~~~~~~~ 132 (155)
|..|+..+++|.+. ||+++++|......+..+.|.|.|++||+|.+|+.....+|
T Consensus 1 G~~c~~~~~eC~s~-pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE~~v~~sF 55 (55)
T 3u7u_G 1 GTSHLVKCAEKEKT-FCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQNYVMASF 55 (55)
T ss_dssp --CCEEECCSTTTT-TSCTTCEEEEECCC--CCCEEEEECTTEESTTSCEECCCC-
T ss_pred CCCCcccCCCCcCC-CCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcCccCccCC
Confidence 46788899999998 99999999521100356789999999999999997655443
No 21
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=98.96 E-value=4.5e-10 Score=72.08 Aligned_cols=76 Identities=26% Similarity=0.636 Sum_probs=58.1
Q ss_pred cCCCCCCC--------CCCC-eeEeCCCCeeeeCCCCCCCCCceecC--CCCCCC-CCCCCCCeeecCccCCCCCCeEee
Q psy11060 47 LCPCAYSP--------CKHG-SCVDKRAGYFCDCPPTYGGKNCSVEL--TGCVGP-DTCLNGGTCKPYLVDETQHRFNCT 114 (155)
Q Consensus 47 ~~~C~~~~--------c~~~-~C~~~~~~~~c~C~~g~~g~~c~~~~--~~C~~~-~~c~~~~~C~~~~~~~~~~~~~C~ 114 (155)
+++|..+| |.++ +|++..++|.|.|++||.|..|+..+ ++|... ..|.. .|+ +..++|.|.
T Consensus 6 ~d~C~~~p~~~~C~~~C~~~g~C~~~~~~y~C~C~~G~~G~~C~~~~~~~~C~~~~~~C~~--~C~-----n~~g~y~C~ 78 (114)
T 1aut_L 6 GDQCLVLPLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCTH--YCL-----EEVGWRRCS 78 (114)
T ss_dssp --CCCCCSSCCSSSSTTTTSEEECCCSSCCCEEECTTEESTTSCEECCSSSSSSGGGGCSS--EEE-----ECSSSEEEE
T ss_pred cccccCCCccccccccCCCcCCCCCCCCCcEeeCCCCCcCCCcCcCCcCCcCcCCCCCCCC--EeE-----CCCCCEEeE
Confidence 57788777 7776 99999999999999999999997543 367643 24543 898 788999999
Q ss_pred CCCCCC----CCCCCcCcc
Q psy11060 115 CPSGYH----GKICEKITT 129 (155)
Q Consensus 115 C~~g~~----g~~C~~~~~ 129 (155)
|++||+ |..|+..++
T Consensus 79 C~~G~~~~~~g~~C~~~~~ 97 (114)
T 1aut_L 79 CAPGYKLGDDLLQCHPAVK 97 (114)
T ss_dssp CCTTEEECTTSSCEEECSS
T ss_pred CCCCeeECCCCCccCcCcc
Confidence 999999 566765443
No 22
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=98.91 E-value=1.9e-10 Score=74.33 Aligned_cols=93 Identities=23% Similarity=0.480 Sum_probs=70.2
Q ss_pred cCCCCCCCCCCCeeEeC-CCCeeeeCCCCCCCCCceec--CCCCCCCCCCCCCCeeecCccCCCCCCeEeeCCCCCC---
Q psy11060 47 LCPCAYSPCKHGSCVDK-RAGYFCDCPPTYGGKNCSVE--LTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYH--- 120 (155)
Q Consensus 47 ~~~C~~~~c~~~~C~~~-~~~~~c~C~~g~~g~~c~~~--~~~C~~~~~c~~~~~C~~~~~~~~~~~~~C~C~~g~~--- 120 (155)
+|+|..+||.+ +|++. .++|.|.|++||.|..+... .++|... +|. +.|. + .++|.|.|++||+
T Consensus 4 ideC~~~pC~~-~C~~~~~g~y~C~C~~Gy~g~~~~~~~C~~~C~~~-~C~--~~C~-----~-~~~y~C~C~~Gy~~~~ 73 (118)
T 1dx5_I 4 VDPCFRANCEY-QCQPLDQTSYLCVCAEGFAPIPHEPHRCQMFCNQT-ACP--ADCD-----P-NTQASCECPEGYILDD 73 (118)
T ss_dssp CCGGGGCCCSS-EEEECSSSCEEEECCTTEEEETTEEEEEEECCCSS-EEE--CEEC-----T-TSTTCEECCTTEEEET
T ss_pred cccCCCCCCCC-CCCCCCCCCEEeECCCCccccCCCCCccccccCCC-CCC--Cccc-----C-CCCeEeECCCCccCCC
Confidence 57788889986 99999 89999999999987643211 1234444 565 5787 5 4789999999999
Q ss_pred CCCCCcCccccc-CCCceEeecCCCCCcce
Q psy11060 121 GKICEKITTMSF-SGGSHIMLNTTREEGYD 149 (155)
Q Consensus 121 g~~C~~~~~~~~-~~~~~~~~~~~~~~~~~ 149 (155)
|..|++++++.. ......+++++..+...
T Consensus 74 g~~C~dideC~~~~~C~~~C~n~~g~y~C~ 103 (118)
T 1dx5_I 74 GFICTDIDECENGGFCSGVCHNLPGTFECI 103 (118)
T ss_dssp TTEEEECCHHHHCSSCSSEEEECSSSEEEE
T ss_pred CCccccccccCCCCCCcCeEEeCCCCEEEE
Confidence 899999999876 44467888887665544
No 23
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=98.86 E-value=6.4e-10 Score=67.96 Aligned_cols=69 Identities=25% Similarity=0.731 Sum_probs=55.9
Q ss_pred cCCCCCCC--CCCCeeEeCCCCeeeeCCCCCC----CCCceecCCCCCCCCCCCCCCeeecCccCCCCCCeEeeCCCCCC
Q psy11060 47 LCPCAYSP--CKHGSCVDKRAGYFCDCPPTYG----GKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYH 120 (155)
Q Consensus 47 ~~~C~~~~--c~~~~C~~~~~~~~c~C~~g~~----g~~c~~~~~~C~~~~~c~~~~~C~~~~~~~~~~~~~C~C~~g~~ 120 (155)
+++|...| |.++.|++..+.|.|.|++||. |..|+ ++++|... +|. +.|+ +..++|.|.|+ |+.
T Consensus 3 ideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~-dideC~~~-~C~--~~C~-----n~~g~y~C~C~-g~~ 72 (87)
T 1z6c_A 3 VDECSLKPSICGTAVCKNIPGDFECECPEGYRYNLKSKSCE-DIDECSEN-MCA--QLCV-----NYPGGYTCYCD-GKK 72 (87)
T ss_dssp SCSSSSSSSSBTTSSCCCBTTBCCCSSSTTCEEETTTTEEE-CCCHHHHS-CCS--SEEC-----CCSSSCCEECC-SSS
T ss_pred cccccCCCCCCCCCEeECCCCCEEEECCCCceECCCCCcCC-CcCeeCCC-CCC--CEEE-----ccCCCEEEECC-CCc
Confidence 57787776 7334899889999999999997 78886 88999777 887 5898 88899999997 666
Q ss_pred CCCCC
Q psy11060 121 GKICE 125 (155)
Q Consensus 121 g~~C~ 125 (155)
|..++
T Consensus 73 G~~~~ 77 (87)
T 1z6c_A 73 GFKLA 77 (87)
T ss_dssp CCBCC
T ss_pred CCccc
Confidence 65554
No 24
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=98.75 E-value=2.5e-09 Score=67.85 Aligned_cols=73 Identities=27% Similarity=0.706 Sum_probs=30.0
Q ss_pred CCCCccCCCCCCCCCC------CeeEeCCCCeeeeCCCCCCC---CCceecCCCCCCCCCCCCCCeeecCccCCCCCCeE
Q psy11060 42 RPLYSLCPCAYSPCKH------GSCVDKRAGYFCDCPPTYGG---KNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFN 112 (155)
Q Consensus 42 ~~g~~~~~C~~~~c~~------~~C~~~~~~~~c~C~~g~~g---~~c~~~~~~C~~~~~c~~~~~C~~~~~~~~~~~~~ 112 (155)
..+|.++.|..++|.. ..|++..+.|.|.|++||.+ ..|+ ++++|....+|. +.|+ +..++|.
T Consensus 19 ~~~~~~~~Cd~neC~~~~~~C~~~C~n~~g~y~C~C~~Gy~g~~g~~C~-dideC~~~~~C~--~~C~-----n~~gsy~ 90 (107)
T 2w2n_E 19 ENLYFQGAMGTNECLDNNGGCSYVCNDLKIGYECLCPDGFQLVAQRRCE-DIDECQDPDTCS--QLCV-----NLEGGYK 90 (107)
T ss_dssp -CCCCSCCBSCCGGGTGGGGCSSEEECCSBSCEEECCTTCEEETTTEEE-C-----------------------------
T ss_pred CCCcCCCCCcCccCcCCCCCCCCEeEeCCCCeEEECCCCccccCCCccc-cccccCCCCCcC--Ceee-----cCCCCEE
Confidence 3455566665555542 17999899999999999986 7787 889997423786 5898 7889999
Q ss_pred eeCCCCCCCC
Q psy11060 113 CTCPSGYHGK 122 (155)
Q Consensus 113 C~C~~g~~g~ 122 (155)
|.|++||++.
T Consensus 91 C~C~~Gy~~~ 100 (107)
T 2w2n_E 91 CQCEEGFQLD 100 (107)
T ss_dssp ----------
T ss_pred EECCCCceEC
Confidence 9999999854
No 25
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=98.75 E-value=8.8e-09 Score=63.41 Aligned_cols=57 Identities=19% Similarity=0.530 Sum_probs=48.3
Q ss_pred eEEcCCceEEEcCCCCc------cCCCCCCCCCCC-eeEeCC--CCeeeeCCCCCCCCCceecCCC
Q psy11060 30 VIMLKSDYRLIIRPLYS------LCPCAYSPCKHG-SCVDKR--AGYFCDCPPTYGGKNCSVELTG 86 (155)
Q Consensus 30 c~~~~~~~~C~C~~g~~------~~~C~~~~c~~~-~C~~~~--~~~~c~C~~g~~g~~c~~~~~~ 86 (155)
|.+..++|.|.|++||. +++|..+||.++ +|++.. +.|.|.|++||.|..|+.++++
T Consensus 25 C~n~~~~y~C~C~~G~~~C~~~~~~~C~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~ide 90 (91)
T 1tpg_A 25 VLRSNRVEYCWCNSGRAQCHSVPVKSCSEPRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEIDTRA 90 (91)
T ss_dssp CSSSSCEEEEECSSSCCBCCEECEEECSSCCSCTTCEEEEESSSSCEEEECCTTCBSSSCCBCSSC
T ss_pred cccCCCCcEeECCCCCcccccCcCCcccCCCCCCCCEeecCCCCCCeEeECCCCCcCCcCCcCCCC
Confidence 45678889999999995 567888899986 999876 8999999999999999876654
No 26
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=98.72 E-value=1.8e-09 Score=71.81 Aligned_cols=88 Identities=24% Similarity=0.615 Sum_probs=66.6
Q ss_pred CCCCCC-eeEeCCCCeeeeCCCCCCC---------CCceecCCCCCCC--CCCCCCCeeecCccCCCCCCeEeeCCCCCC
Q psy11060 53 SPCKHG-SCVDKRAGYFCDCPPTYGG---------KNCSVELTGCVGP--DTCLNGGTCKPYLVDETQHRFNCTCPSGYH 120 (155)
Q Consensus 53 ~~c~~~-~C~~~~~~~~c~C~~g~~g---------~~c~~~~~~C~~~--~~c~~~~~C~~~~~~~~~~~~~C~C~~g~~ 120 (155)
++|.++ +|++. |.|.|++||.| ..|+ ++++|... .+|.+.+.|+ +..++|.|.|++||+
T Consensus 7 ~~C~~~~~C~~~---~~C~C~~G~~g~~~~~~~~~~~C~-dideC~~~~~~~C~~~~~C~-----n~~g~y~C~C~~Gy~ 77 (143)
T 2bou_A 7 RWCPQDSSCVNA---TACRCNPGFSSFSEIITTPMETCD-DINECATLSKVSCGKFSDCW-----NTEGSYDCVCSPGYE 77 (143)
T ss_dssp TTCCTTEEESSS---SCEEECTTEECSSSSBCSTTCCCE-ECCGGGC----CCCTTEEEE-----ECSSCEEEEECTTEE
T ss_pred CcCCCCCEEcCC---CEEeCCCCCcCccccccCCCCcCC-ccccccCCCCCCCCCCCEEE-----cCCCCeEeECCCCcc
Confidence 567765 88653 89999999987 5785 78899864 3799889999 788999999999999
Q ss_pred CC------------CCCcCccccc--C--CCceEeecCCCCCcce
Q psy11060 121 GK------------ICEKITTMSF--S--GGSHIMLNTTREEGYD 149 (155)
Q Consensus 121 g~------------~C~~~~~~~~--~--~~~~~~~~~~~~~~~~ 149 (155)
|. .|++++++.. . .....+++++..+...
T Consensus 78 g~~~~~~~~~~~~~~C~dideC~~~~~~C~~~~~C~n~~g~y~C~ 122 (143)
T 2bou_A 78 PVSGAKTFKNESENTCQDVDECSSGQHQCDSSTVCFNTVGSYSCR 122 (143)
T ss_dssp ETTCCSCBSSGGGCCEEECCHHHHTCCCCCTTSEEEECSSCEEEE
T ss_pred cCcCccccccCCCCCcCCccCccCcCCCCCCCCEEECCCCCEEee
Confidence 76 6778888864 1 2236788887655443
No 27
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=98.70 E-value=1.3e-11 Score=89.64 Aligned_cols=98 Identities=11% Similarity=0.087 Sum_probs=72.6
Q ss_pred ceeEEcCCceEEEcCCCCcc-------CC-----------------------------CCCCCCCCC-eeEeCCCCeeee
Q psy11060 28 LNVIMLKSDYRLIIRPLYSL-------CP-----------------------------CAYSPCKHG-SCVDKRAGYFCD 70 (155)
Q Consensus 28 ~~c~~~~~~~~C~C~~g~~~-------~~-----------------------------C~~~~c~~~-~C~~~~~~~~c~ 70 (155)
..|++..++|.|.|+.||++ ++ |.+.||.++ +|++...+|+|.
T Consensus 44 G~C~~g~~~y~C~Cp~Gf~G~~Ce~ni~ec~~~~~c~s~pC~nggtc~~G~~c~~~~eC~s~pC~ngG~C~~~~~sy~C~ 123 (267)
T 4fbr_A 44 GKTLKGTMTYNGEGPIGFRGTLSSANNYTVENQWGGTSAPWQPGGVWVLGARDKQNIVAVSIKSNDGGKTLTGTTTYNGE 123 (267)
T ss_dssp TSEEEEEEEETTSCCEEEEEEECSTTEEEEEEESSSTTSCEEEEEEEECCCCSSCCEEEEEEECSSTTSEEEEEEEETTS
T ss_pred CeecCCCCCeEEeCCCCcccccccccccccccccCcCCCcccCCCeeeccCccccccccCCCCCCCCCEEecCCccEEee
Confidence 34788889999999999982 22 223456665 777777889999
Q ss_pred CCCCCCCCCceecCCC------CCCC----------------------CCCCCCCeeecCccCCCCCCeEeeCCCCCCCC
Q psy11060 71 CPPTYGGKNCSVELTG------CVGP----------------------DTCLNGGTCKPYLVDETQHRFNCTCPSGYHGK 122 (155)
Q Consensus 71 C~~g~~g~~c~~~~~~------C~~~----------------------~~c~~~~~C~~~~~~~~~~~~~C~C~~g~~g~ 122 (155)
|+.+|+|..|+.++++ |.+. .+|.++++|. +...+|+|.|++||+|.
T Consensus 124 C~~Gf~G~~Ce~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~~i~c~~~~c~ngg~C~-----dg~~~y~C~Cp~Gf~G~ 198 (267)
T 4fbr_A 124 GPIGFKSEVTDGDTYSVENQWGGSAAPWHSGGVWVLGTRGKQNVINVDAKSNDGGKTL-----SGTMTYNGEGPIGFRGT 198 (267)
T ss_dssp CCEEEEEEECCCCEEEEEEECSSTTSCCEEEEEEECCSSTTSCEEEEEEECSSTTSEE-----EEEEEETTSCCEEEEEE
T ss_pred CCCCccccCCCCCcccccccCCcCCccccCCcceecccccccccccCCCCCCCCCEee-----CCCCCeEEeCCCCcccc
Confidence 9999998888755433 2222 0467777777 56778999999999999
Q ss_pred CCCcCccc
Q psy11060 123 ICEKITTM 130 (155)
Q Consensus 123 ~C~~~~~~ 130 (155)
.|+..+..
T Consensus 199 ~c~~~i~e 206 (267)
T 4fbr_A 199 LTSPDTYT 206 (267)
T ss_dssp EEETTEEE
T ss_pred ccccccce
Confidence 99887654
No 28
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=98.68 E-value=1.2e-09 Score=72.99 Aligned_cols=88 Identities=23% Similarity=0.428 Sum_probs=63.0
Q ss_pred eeEEcCCceEEEcCCCCccCCCCC-------CCCCC---C-eeE-------------eCCC----------CeeeeCCCC
Q psy11060 29 NVIMLKSDYRLIIRPLYSLCPCAY-------SPCKH---G-SCV-------------DKRA----------GYFCDCPPT 74 (155)
Q Consensus 29 ~c~~~~~~~~C~C~~g~~~~~C~~-------~~c~~---~-~C~-------------~~~~----------~~~c~C~~g 74 (155)
.|++..++|.|.|++||+++.+.. .+|.. + .|. ...+ .|.|.|++|
T Consensus 16 ~C~n~~g~y~C~C~~G~~g~~~~~~C~~~~~~~C~~~~~g~~C~~~~~~c~~~~~C~~~~g~~~g~~C~~c~~~C~C~~G 95 (147)
T 2w86_A 16 VCKNSPGSFICECSSESTLDPTKTICIETIKGTCWQTVIDGRCEININGATLKSQCCSSLGAAWGSPCTLCQVDPICGKG 95 (147)
T ss_dssp EEEEETTEEEEECCTTEEECTTSSBEEECCCEEEEEEEETTEEEEEEEEEECHHHHHTTTCSEETTTTEECCCCTTTCTT
T ss_pred EeECCCCCEEeECCCCcccCCCCCeecCCCCCcccCCCCCCccccCCCccccCCccccCcCcccCCCcccCCCcccCCCc
Confidence 689999999999999998654321 00100 0 221 1111 167789999
Q ss_pred CC---CCCceecCCCCCCC-CCCCCCCeeecCccCCCCCCeEeeCCCCCCCCC
Q psy11060 75 YG---GKNCSVELTGCVGP-DTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKI 123 (155)
Q Consensus 75 ~~---g~~c~~~~~~C~~~-~~c~~~~~C~~~~~~~~~~~~~C~C~~g~~g~~ 123 (155)
|. |..|+ ++++|... ++|.++ .|+ +..++|.|.|++||++..
T Consensus 96 y~~~~g~~C~-dideC~~~~~~C~~g-~C~-----n~~g~y~C~C~~Gy~g~~ 141 (147)
T 2w86_A 96 YSRIKGTQCE-DIDECEVFPGVCKNG-LCV-----NTRGSFKCQCPSGMTLDA 141 (147)
T ss_dssp EEEEETTEEE-ECCHHHHSTTCSSSS-EEE-----EETTEEEEECCTTCCBCT
T ss_pred cccCCCCccC-ccccccCCCCCCCCC-EEE-----CCCCCEEeeCCCCCccCC
Confidence 94 88997 89999754 359864 999 788999999999998654
No 29
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=98.66 E-value=2.8e-09 Score=72.36 Aligned_cols=90 Identities=21% Similarity=0.407 Sum_probs=59.9
Q ss_pred ceeEEcCCceEEEcCCCCc----cCCCCC----------CCCC--CC-eeEeCCC----CeeeeCCCCCC----------
Q psy11060 28 LNVIMLKSDYRLIIRPLYS----LCPCAY----------SPCK--HG-SCVDKRA----GYFCDCPPTYG---------- 76 (155)
Q Consensus 28 ~~c~~~~~~~~C~C~~g~~----~~~C~~----------~~c~--~~-~C~~~~~----~~~c~C~~g~~---------- 76 (155)
..|++..++|+|.|++||. +..|.. .+|. .+ .|++..+ .|.|.|.+||.
T Consensus 15 ~~C~n~~gsy~C~C~~Gy~~~~~g~~C~d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C~C~~G~~~~~~C~~C~~ 94 (162)
T 1uzk_A 15 GNCVNTPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCCCSLGKAWGTPCEMCPA 94 (162)
T ss_dssp SEEEEETTEEEEECCTTCEECTTSSBEECCCCEEEEEEC----------CEEEEEEEECHHHHHTTTCCEETTTTEECCC
T ss_pred CEeECCCCCEEEeCCCCCeECCCCCcccCCCCCcccCCCcccCCCCCCcccCCcCCcccCceeeCCCCCCcCCCcccCCC
Confidence 4699999999999999997 444431 1121 12 6665443 46666666553
Q ss_pred -----------------CC---CceecCCCCCCC-CCCCCCCeeecCccCCCCCCeEeeCCCCCCCCC
Q psy11060 77 -----------------GK---NCSVELTGCVGP-DTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKI 123 (155)
Q Consensus 77 -----------------g~---~c~~~~~~C~~~-~~c~~~~~C~~~~~~~~~~~~~C~C~~g~~g~~ 123 (155)
+. .+..++++|... ++|.+ +.|+ ++.++|.|.|++||++..
T Consensus 95 ~~~~~y~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~~-g~C~-----n~~gsy~C~C~~Gy~g~~ 156 (162)
T 1uzk_A 95 VNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQG-GKCI-----NTFGSFQCRCPTGYYLNE 156 (162)
T ss_dssp TTSHHHHHHCTTCTTEEECTTTCCEEECCHHHHCGGGGBT-SEEE-----ECSSCEEEECCTTCCBCT
T ss_pred CCCCCceeECCCCCCcccCCCCCccCccccccCCCCCcCC-CEeE-----cCCCCEEeeCCCCccCCC
Confidence 21 233578888754 36886 5999 889999999999998754
No 30
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.64 E-value=9.5e-08 Score=73.54 Aligned_cols=72 Identities=28% Similarity=0.783 Sum_probs=57.4
Q ss_pred CCCCCCCCCCC-eeEeCCCCeeeeCCCCCC---CCCceecCCCCCCCCCCCCCCeeecCccCCCCCCeEeeCCCCCCC--
Q psy11060 48 CPCAYSPCKHG-SCVDKRAGYFCDCPPTYG---GKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHG-- 121 (155)
Q Consensus 48 ~~C~~~~c~~~-~C~~~~~~~~c~C~~g~~---g~~c~~~~~~C~~~~~c~~~~~C~~~~~~~~~~~~~C~C~~g~~g-- 121 (155)
++|...++..+ .|++..++|.|.|++||. |..|+ ++++|....+|.+ .|. +..++|.|.|++||++
T Consensus 1 ~eC~~~~~~c~~~C~~~~~~y~C~C~~G~~~~~~~~C~-dideC~~~~~C~~--~C~-----n~~g~~~C~C~~g~~~~~ 72 (400)
T 3p5b_L 1 NECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCE-DIDECQDPDTCSQ--LCV-----NLEGGYKCQCEEGFQLDP 72 (400)
T ss_dssp CCTTTTGGGCSSEEEECSSSEEEECCTTEEECSSSCEE-ECCCCSTTSSCSS--CCB-----CCSSSCBCCCCTTCCCCT
T ss_pred CcccCCCCCCCCEeECCCCCeEEECCCCCCcCCCCccc-CchhhhccCCCCC--ccC-----CCccceeeeccccccccc
Confidence 46777665554 899999999999999997 78896 8999974347865 798 8889999999999984
Q ss_pred --CCCCcC
Q psy11060 122 --KICEKI 127 (155)
Q Consensus 122 --~~C~~~ 127 (155)
..|..+
T Consensus 73 ~~~~C~~~ 80 (400)
T 3p5b_L 73 HTKACKAV 80 (400)
T ss_dssp TTSSCCCS
T ss_pred cccceeec
Confidence 456544
No 31
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=98.53 E-value=1.1e-07 Score=48.94 Aligned_cols=37 Identities=43% Similarity=1.093 Sum_probs=32.9
Q ss_pred cCCCCCCCCCCCCCCeeecCccCCCCCCeEeeCCCCCCCCCCC
Q psy11060 83 ELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICE 125 (155)
Q Consensus 83 ~~~~C~~~~~c~~~~~C~~~~~~~~~~~~~C~C~~g~~g~~C~ 125 (155)
++++|... ||.+++.|. +..++|.|.|++||+|..|+
T Consensus 2 d~d~C~~~-pC~ngg~C~-----~~~~~~~C~C~~G~~G~~Ce 38 (39)
T 1edm_B 2 DGDQCESN-PCLNGGSCK-----DDINSYECWCPFGFEGKNCE 38 (39)
T ss_dssp CCCTTTTC-CCCTTCEEE-----EETTEEEEECCTTCCSTTSC
T ss_pred ccccCCCC-CCCCCCEeE-----cCCCceEeECCCCCcCCccC
Confidence 46788887 999999998 67789999999999999986
No 32
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=98.49 E-value=8.8e-08 Score=74.36 Aligned_cols=81 Identities=22% Similarity=0.581 Sum_probs=61.9
Q ss_pred eEEEcCCCCccCCCCC--CCCCCC-eeEeCCCCeeeeCCCCCCCCCceecCC----------CCCCCCCCCCCCeeecCc
Q psy11060 37 YRLIIRPLYSLCPCAY--SPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELT----------GCVGPDTCLNGGTCKPYL 103 (155)
Q Consensus 37 ~~C~C~~g~~~~~C~~--~~c~~~-~C~~~~~~~~c~C~~g~~g~~c~~~~~----------~C~~~~~c~~~~~C~~~~ 103 (155)
+.|.|..||.++.|.. .||.++ .|.. ..+.|.|+++|.|..|+.... .|....+|.+++.|.
T Consensus 185 ~~c~C~~g~~G~~C~~~C~~C~~~G~C~~--~~g~C~C~~G~~G~~Ce~~C~~g~~g~~C~~~C~~~~~C~~~g~C~--- 259 (423)
T 2gy5_A 185 IVRRCEAQKWGPECNHLCTACMNNGVCHE--DTGECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFCL--- 259 (423)
T ss_dssp EECSSCTTEESTTSCEECCCCCTTCEECT--TTCCEECCTTEESTTSCEECCTTEESTTSCEECCSTTTTTTCCEEE---
T ss_pred cCCcCCCCCCCCCCCCCCCCCCCCCEEEC--CCCcEeCCCCccCCCcccccCCCCCCCCcCccCCCCCCCCCCCEEC---
Confidence 3578999999999976 378875 9975 456999999999999985322 233222677777786
Q ss_pred cCCCCCCeEeeCCCCCCCCCCCc
Q psy11060 104 VDETQHRFNCTCPSGYHGKICEK 126 (155)
Q Consensus 104 ~~~~~~~~~C~C~~g~~g~~C~~ 126 (155)
.+++.|.|++||+|..|+.
T Consensus 260 ----~~~~~C~C~~G~~G~~C~~ 278 (423)
T 2gy5_A 260 ----PDPYGCSCATGWKGLQCNE 278 (423)
T ss_dssp ----TTTTEEECCBTCBSGGGCB
T ss_pred ----CCCCeEEeCCCcccccccC
Confidence 3578999999999999986
No 33
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=98.49 E-value=5.4e-07 Score=69.94 Aligned_cols=83 Identities=27% Similarity=0.592 Sum_probs=59.8
Q ss_pred CceEEEcCCCCccCCCCC------------------CCCCCC-eeEeCCCCeeeeCCCCCCCCCceecC------CCCCC
Q psy11060 35 SDYRLIIRPLYSLCPCAY------------------SPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVEL------TGCVG 89 (155)
Q Consensus 35 ~~~~C~C~~g~~~~~C~~------------------~~c~~~-~C~~~~~~~~c~C~~g~~g~~c~~~~------~~C~~ 89 (155)
+.+.|.|++||.+..|.. .+|.++ .|. .+.+.|.|.++|.|..|+..- ..|..
T Consensus 214 ~~g~C~C~~G~~G~~Ce~~C~~g~~g~~C~~~C~~~~~C~~~g~C~--~~~~~C~C~~G~~G~~C~~~C~~G~~G~~C~~ 291 (423)
T 2gy5_A 214 DTGECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFCL--PDPYGCSCATGWKGLQCNEACHPGFYGPDCKL 291 (423)
T ss_dssp TTCCEECCTTEESTTSCEECCTTEESTTSCEECCSTTTTTTCCEEE--TTTTEEECCBTCBSGGGCBCCCTTBCSBTTCC
T ss_pred CCCcEeCCCCccCCCcccccCCCCCCCCcCccCCCCCCCCCCCEEC--CCCCeEEeCCCcccccccCccCCCCcCCcccc
Confidence 468999999999777752 224332 564 456899999999999987411 22332
Q ss_pred CCCCCCCCeeecCccCCCCCCeEeeCCCCCCCCCCCcC
Q psy11060 90 PDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICEKI 127 (155)
Q Consensus 90 ~~~c~~~~~C~~~~~~~~~~~~~C~C~~g~~g~~C~~~ 127 (155)
..+|.+++.|. +. +.|.|++||+|..|+..
T Consensus 292 ~C~C~ngg~C~-----~~---~~C~C~~G~~G~~Ce~~ 321 (423)
T 2gy5_A 292 RCSCNNGEMCD-----RF---QGCLCSPGWQGLQCERE 321 (423)
T ss_dssp BCCCTTCCEEE-----TT---TEEECCTTCBSTTSCBC
T ss_pred cccCCCCCEec-----CC---CceECCCCCcCCCCccC
Confidence 23688889998 33 34999999999999876
No 34
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=98.49 E-value=2.2e-07 Score=69.76 Aligned_cols=76 Identities=37% Similarity=0.783 Sum_probs=55.5
Q ss_pred ceEEEcCCCCccCCCCC----CCCCCC-eeEeCCCCeeeeCCCCCCCCCceecCCCCCCCCCCCCCCeeecCccCCCCCC
Q psy11060 36 DYRLIIRPLYSLCPCAY----SPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHR 110 (155)
Q Consensus 36 ~~~C~C~~g~~~~~C~~----~~c~~~-~C~~~~~~~~c~C~~g~~g~~c~~~~~~C~~~~~c~~~~~C~~~~~~~~~~~ 110 (155)
.+.|.|.+||.++.|.. .+|.++ .|+. .+.|.|.+||.|..|+. ..|. . +|.+++.|. . .
T Consensus 164 ~~~C~C~~G~~G~~C~~~~C~~~C~~~G~C~~---~~~C~C~~G~~G~~C~~--~~C~-~-~C~~~G~C~-----~---~ 228 (324)
T 2ygq_A 164 RRICECPDGFHGPHCEKALCTPRCMNGGLCVT---PGFCICPPGFYGVNCDK--ANCS-T-TCFNGGTCF-----Y---P 228 (324)
T ss_dssp TSCEECCTTEESSSSCEESSSSCCCTTCEECS---SCCEECCTTCBTTTTCB--CCCS-S-CCCSSCCBS-----C---S
T ss_pred CCeEECCCCCcCCCCCCCCCCCCCCCCCEEcC---CCEEeCCCCccCCCccc--CcCC-C-CCCCCCeeC-----C---C
Confidence 47899999999887764 356654 7854 35889999999988864 3464 3 688888886 2 3
Q ss_pred eEeeCCCCCCCCCCCc
Q psy11060 111 FNCTCPSGYHGKICEK 126 (155)
Q Consensus 111 ~~C~C~~g~~g~~C~~ 126 (155)
+.|.|++||+|..|+.
T Consensus 229 ~~C~C~~G~~G~~C~~ 244 (324)
T 2ygq_A 229 GKCICPPGLEGEQCEI 244 (324)
T ss_dssp SCBCCCTTCCTTTTC-
T ss_pred CeeeCCCCccCCCCCc
Confidence 6788888888888864
No 35
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=98.42 E-value=1.1e-07 Score=77.81 Aligned_cols=83 Identities=23% Similarity=0.509 Sum_probs=63.7
Q ss_pred eEEcCCceE---EEcCCCCccCCCCC-------------------CCCCCC-eeEeCCCCeeeeCC----CCCCCCCcee
Q psy11060 30 VIMLKSDYR---LIIRPLYSLCPCAY-------------------SPCKHG-SCVDKRAGYFCDCP----PTYGGKNCSV 82 (155)
Q Consensus 30 c~~~~~~~~---C~C~~g~~~~~C~~-------------------~~c~~~-~C~~~~~~~~c~C~----~g~~g~~c~~ 82 (155)
|.+..|.+. |.|.+||.+..|.. .+|.++ .|+. +.|.|. ++|.|..|+.
T Consensus 448 C~~g~G~~~~G~C~C~~Gy~G~~Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~----g~C~C~~~~~~Gy~G~~Ce~ 523 (690)
T 3fcs_B 448 CNNGNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECLC----GQCVCHSSDFGKITGKYCEC 523 (690)
T ss_dssp TTTTSEEEETTEEEECTTCCSSSSCCSCC------CCCCSSSSSSCGGGGSEEECS----SSEEECCCSSCCCBSTTSCB
T ss_pred ccCCCCeEeCCceEeCCCccCCceeeccCccCCccCCcCCCCCCCCCCCCCCEEEC----CeeEeecCCCCCeeCCCcCc
Confidence 444555666 99999999766632 125553 7763 589999 9999999987
Q ss_pred cCCCCCCC--CCCCCCCeeecCccCCCCCCeEeeCCCCCCCCCCC
Q psy11060 83 ELTGCVGP--DTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICE 125 (155)
Q Consensus 83 ~~~~C~~~--~~c~~~~~C~~~~~~~~~~~~~C~C~~g~~g~~C~ 125 (155)
+...|... .+|.+++.|. . +.|.|++||+|..|+
T Consensus 524 ~~~~C~~~~~~~C~~~G~C~-----~----g~C~C~~Gy~G~~Ce 559 (690)
T 3fcs_B 524 DDFSCVRYKGEMCSGHGQCS-----C----GDCLCDSDWTGYYCN 559 (690)
T ss_dssp CSSCCCBSSSSBGGGSEEEE-----T----TEEEECTTEESSSSC
T ss_pred ccCcCcCCCCCCCCCCCEec-----C----CeeECcCCCcCCCCc
Confidence 77788752 3798889998 3 789999999999998
No 36
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=98.41 E-value=3.7e-08 Score=73.99 Aligned_cols=76 Identities=33% Similarity=0.821 Sum_probs=32.9
Q ss_pred ceEEEcCCCCccCCCCC----CCCCCC-eeEeCCCCeeeeCCCCCCCCCceecCCCCCCCCCCCCCCeeecCccCCCCCC
Q psy11060 36 DYRLIIRPLYSLCPCAY----SPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHR 110 (155)
Q Consensus 36 ~~~C~C~~g~~~~~C~~----~~c~~~-~C~~~~~~~~c~C~~g~~g~~c~~~~~~C~~~~~c~~~~~C~~~~~~~~~~~ 110 (155)
.+.|.|.+||.+..|.. .+|.++ +|+. .+.|.|.+||.|..|+. +.|. . +|.+++.|. . .
T Consensus 196 ~~~C~C~~G~~G~~C~~~~C~~~C~~~G~C~~---~~~C~C~~G~~G~~C~~--~~C~-~-~C~~~g~C~-----~---~ 260 (324)
T 2ygq_A 196 PGFCICPPGFYGVNCDKANCSTTCFNGGTCFY---PGKCICPPGLEGEQCEI--SKCP-Q-PCRNGGKCI-----G---K 260 (324)
T ss_dssp SCCEECCTTCBTTTTCBCCCSSCCCSSCCBSC---SSCBCCCTTCCTTTTC-----------------------------
T ss_pred CCEEeCCCCccCCCcccCcCCCCCCCCCeeCC---CCeeeCCCCccCCCCCc--CcCC-C-cCCCCCEEC-----C---C
Confidence 47899999999877754 456554 7754 36899999999998863 4575 4 788888887 2 4
Q ss_pred eEeeCCCCCCCCCCCc
Q psy11060 111 FNCTCPSGYHGKICEK 126 (155)
Q Consensus 111 ~~C~C~~g~~g~~C~~ 126 (155)
+.|.|++||+|..|+.
T Consensus 261 ~~C~C~~G~~G~~C~~ 276 (324)
T 2ygq_A 261 SKCKCSKGYQGDLCSK 276 (324)
T ss_dssp ----------------
T ss_pred CEEECCCCCcCCCCcC
Confidence 7899999999988874
No 37
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.38 E-value=1.2e-07 Score=72.58 Aligned_cols=74 Identities=23% Similarity=0.658 Sum_probs=20.2
Q ss_pred cCCCCCCCCCCC-eeEeCCCCeeeeCCCCCC----CCCceecCCCCCCCCCCCCCCeeecCccCCCCCCeEeeCCCCCC-
Q psy11060 47 LCPCAYSPCKHG-SCVDKRAGYFCDCPPTYG----GKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYH- 120 (155)
Q Consensus 47 ~~~C~~~~c~~~-~C~~~~~~~~c~C~~g~~----g~~c~~~~~~C~~~~~c~~~~~C~~~~~~~~~~~~~C~C~~g~~- 120 (155)
+++|..+++... .|.+..++|.|.|++||. |..| .++++|....+|.+ .|. ++.++|.|.|++||+
T Consensus 3 ~~~C~~~~~~c~~~C~~~~g~~~C~C~~G~~l~~~~~~C-~d~~eC~~~~~C~~--~C~-----~~~g~~~C~C~~g~~l 74 (386)
T 3v65_B 3 EENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTC-QDVNECAEEGYCSQ--GCT-----NSEGAFQCWCEAGYEL 74 (386)
T ss_dssp --------------------------------------------------CCTT--EEC----------CCEECCTTEEE
T ss_pred cCcccCCCCCCCCCCcCCCCCcEeECCCCceECCCCCcc-CccceeCCcCcccC--cCC-----CCCCCCeEEECCCceE
Confidence 466776653333 787778889999999997 8889 48899973237876 498 788999999999998
Q ss_pred ---CCCCCcCc
Q psy11060 121 ---GKICEKIT 128 (155)
Q Consensus 121 ---g~~C~~~~ 128 (155)
+..|+...
T Consensus 75 ~~d~~~C~~~~ 85 (386)
T 3v65_B 75 RPDRRSCKALG 85 (386)
T ss_dssp CTTSSCEEECS
T ss_pred cCCCCeECCcc
Confidence 77786543
No 38
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=98.37 E-value=3.3e-07 Score=55.11 Aligned_cols=51 Identities=24% Similarity=0.477 Sum_probs=44.1
Q ss_pred ceeEEcCCceEEEcCCCCc--------cCCCC-CCCCCCCeeEeCCCCeeeeCCCCCCCC
Q psy11060 28 LNVIMLKSDYRLIIRPLYS--------LCPCA-YSPCKHGSCVDKRAGYFCDCPPTYGGK 78 (155)
Q Consensus 28 ~~c~~~~~~~~C~C~~g~~--------~~~C~-~~~c~~~~C~~~~~~~~c~C~~g~~g~ 78 (155)
..|++..++|.|.|++||. +++|. .+||.+++|++..++|.|.|++||.+.
T Consensus 17 g~C~n~~g~y~C~C~~Gy~~~g~~C~dideC~~~~~C~~~~C~n~~g~y~C~C~~G~~g~ 76 (82)
T 1emn_A 17 GQCINTDGSYRCECPFGYILAGNECVDTDECSVGNPCGNGTCKNVIGGFECTCEEGFEPG 76 (82)
T ss_dssp SEECCCSSCCCEECCTTEEEETTEEEECCGGGTCCTTSSSCEEECSSSEEECCSSSSCCC
T ss_pred CEEEecCCCEEEECCCCeECCCCccCCcccccCCCCCCCCEeECCCCCEEeECCCCeEeC
Confidence 3688999999999999995 67776 678876799999999999999999764
No 39
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=98.37 E-value=2.6e-07 Score=51.26 Aligned_cols=39 Identities=23% Similarity=0.688 Sum_probs=32.6
Q ss_pred cCCCCCCCCCCC-eeE-----eCCCCeeeeCCCCCCCCCceecCC
Q psy11060 47 LCPCAYSPCKHG-SCV-----DKRAGYFCDCPPTYGGKNCSVELT 85 (155)
Q Consensus 47 ~~~C~~~~c~~~-~C~-----~~~~~~~c~C~~g~~g~~c~~~~~ 85 (155)
+++|.++||.++ +|. +..+.|.|.|+++|.|.+|+..+.
T Consensus 8 ~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE~~v~ 52 (55)
T 3u7u_G 8 CAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQNYVM 52 (55)
T ss_dssp CCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEESTTSCEECC
T ss_pred CCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcCccCc
Confidence 688999999997 995 456789999999999999987654
No 40
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=98.34 E-value=5.8e-10 Score=81.06 Aligned_cols=94 Identities=15% Similarity=0.106 Sum_probs=69.8
Q ss_pred eeEEcCCceEEEcCCCC---ccCCCCC------CCCCCC-eeEeCCCCeeeeCCCCCCCCCceecCCC------------
Q psy11060 29 NVIMLKSDYRLIIRPLY---SLCPCAY------SPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTG------------ 86 (155)
Q Consensus 29 ~c~~~~~~~~C~C~~g~---~~~~C~~------~~c~~~-~C~~~~~~~~c~C~~g~~g~~c~~~~~~------------ 86 (155)
.+.+..+++.+-+.+|. .+..+.. .+|.++ +|++..++|+|.|+.||.|..|+..+++
T Consensus 5 ~~~n~~Gg~s~~~~pgg~~~~g~~~~~n~~~~~~~c~ngG~C~~g~~~y~C~Cp~Gf~G~~Ce~ni~ec~~~~~c~s~pC 84 (267)
T 4fbr_A 5 LVQNQWGGSQATWNPGGLWLIGARDKQNVVALDIKSDDGGKTLKGTMTYNGEGPIGFRGTLSSANNYTVENQWGGTSAPW 84 (267)
T ss_dssp EEEEECSSTTSCCEEEEEEECCCCSSCCEEEEEEECSSTTSEEEEEEEETTSCCEEEEEEECSTTEEEEEEESSSTTSCE
T ss_pred eEeecCCcccCCcCCCCceeeccccccccccCCCCcCCCCeecCCCCCeEEeCCCCcccccccccccccccccCcCCCcc
Confidence 46788888888777772 2333322 256665 9999999999999999998888755444
Q ss_pred -----------------CCCCCCCCCCCeeecCccCCCCCCeEeeCCCCCCCCCCCcCc
Q psy11060 87 -----------------CVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICEKIT 128 (155)
Q Consensus 87 -----------------C~~~~~c~~~~~C~~~~~~~~~~~~~C~C~~g~~g~~C~~~~ 128 (155)
|.+. ||.++++|+ +...+|.|.|++||+|..|+...
T Consensus 85 ~nggtc~~G~~c~~~~eC~s~-pC~ngG~C~-----~~~~sy~C~C~~Gf~G~~Ce~~~ 137 (267)
T 4fbr_A 85 QPGGVWVLGARDKQNIVAVSI-KSNDGGKTL-----TGTTTYNGEGPIGFKSEVTDGDT 137 (267)
T ss_dssp EEEEEEECCCCSSCCEEEEEE-ECSSTTSEE-----EEEEEETTSCCEEEEEEECCCCE
T ss_pred cCCCeeeccCccccccccCCC-CCCCCCEEe-----cCCccEEeeCCCCccccCCCCCc
Confidence 3334 677777777 56778999999999999998764
No 41
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=98.31 E-value=5e-09 Score=69.99 Aligned_cols=97 Identities=21% Similarity=0.458 Sum_probs=59.9
Q ss_pred cCCCCCCCCCCCeeEeCCCCeeeeCCCCCCCCC----ceecCC----------CCCCC-CCCCCCCeeecCccCCCCC--
Q psy11060 47 LCPCAYSPCKHGSCVDKRAGYFCDCPPTYGGKN----CSVELT----------GCVGP-DTCLNGGTCKPYLVDETQH-- 109 (155)
Q Consensus 47 ~~~C~~~~c~~~~C~~~~~~~~c~C~~g~~g~~----c~~~~~----------~C~~~-~~c~~~~~C~~~~~~~~~~-- 109 (155)
+|+|..+||.+++|++..++|.|.|++||.+.. |..... .|... +.|.....|. +..+
T Consensus 4 ideC~~~pC~ng~C~n~~g~y~C~C~~G~~g~~~~~~C~~~~~~~C~~~~~g~~C~~~~~~c~~~~~C~-----~~~g~~ 78 (147)
T 2w86_A 4 IDECESSPCINGVCKNSPGSFICECSSESTLDPTKTICIETIKGTCWQTVIDGRCEININGATLKSQCC-----SSLGAA 78 (147)
T ss_dssp CCGGGGCCSBTSEEEEETTEEEEECCTTEEECTTSSBEEECCCEEEEEEEETTEEEEEEEEEECHHHHH-----TTTCSE
T ss_pred CccCcCCCCCCCEeECCCCCEEeECCCCcccCCCCCeecCCCCCcccCCCCCCccccCCCccccCCccc-----cCcCcc
Confidence 678888899877999999999999999997542 321100 01100 0010001111 1111
Q ss_pred --------CeEeeCCCCCC---CCCCCcCcccccCC--Cc-eEeecCCCCCcc
Q psy11060 110 --------RFNCTCPSGYH---GKICEKITTMSFSG--GS-HIMLNTTREEGY 148 (155)
Q Consensus 110 --------~~~C~C~~g~~---g~~C~~~~~~~~~~--~~-~~~~~~~~~~~~ 148 (155)
.|.|.|++||+ |..|++++++.... .. ..+++++..+..
T Consensus 79 ~g~~C~~c~~~C~C~~Gy~~~~g~~C~dideC~~~~~~C~~g~C~n~~g~y~C 131 (147)
T 2w86_A 79 WGSPCTLCQVDPICGKGYSRIKGTQCEDIDECEVFPGVCKNGLCVNTRGSFKC 131 (147)
T ss_dssp ETTTTEECCCCTTTCTTEEEEETTEEEECCHHHHSTTCSSSSEEEEETTEEEE
T ss_pred cCCCcccCCCcccCCCccccCCCCccCccccccCCCCCCCCCEEECCCCCEEe
Confidence 26789999995 99999999987432 11 278888765444
No 42
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=98.31 E-value=5.7e-08 Score=66.37 Aligned_cols=90 Identities=22% Similarity=0.520 Sum_probs=63.1
Q ss_pred eEEEcCCCCccCCCCCCC----CC--CCeeEeCCCCeeeeCCCCCCCCCceecCCCCCCCCCCCCCCeeecCccCCCCCC
Q psy11060 37 YRLIIRPLYSLCPCAYSP----CK--HGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHR 110 (155)
Q Consensus 37 ~~C~C~~g~~~~~C~~~~----c~--~~~C~~~~~~~~c~C~~g~~g~~c~~~~~~C~~~~~c~~~~~C~~~~~~~~~~~ 110 (155)
..|+|.+||.++.|.... |. ++.|+. .+.|.|.++|.|..|+. |.....|.++ .|. ++
T Consensus 50 g~C~C~~G~~G~~C~~~~C~~~C~~~~g~C~~---~~~C~C~~G~~G~~C~~----C~~~~~C~~g-~C~--------~~ 113 (169)
T 2vj2_A 50 GNKTCMEGWMGPECNRAICRQGCSPKHGSCKL---PGDCRCQYGWQGLYCDK----CIPHPGCVHG-ICN--------EP 113 (169)
T ss_dssp CCEEECTTEESTTSCEECCCTTCCTTTEECSS---TTCCEECTTEESSSSCE----ECCCTTCSSE-ECS--------ST
T ss_pred CeeECCCCCcCCCCCCCCCCCCCCCCCcccCC---CCeeECCCCCCCCCccc----CCCCCCCCCC-CcC--------CC
Confidence 456999999988886533 42 235643 47999999999999863 5544137754 775 36
Q ss_pred eEeeCCCCCCCCCCC-cCccccc-C--CCceEeecC
Q psy11060 111 FNCTCPSGYHGKICE-KITTMSF-S--GGSHIMLNT 142 (155)
Q Consensus 111 ~~C~C~~g~~g~~C~-~~~~~~~-~--~~~~~~~~~ 142 (155)
+.|.|++||+|..|+ +++++.. . .....++++
T Consensus 114 ~~C~C~~G~~G~~C~~~~~~C~~~~~C~~~g~C~~~ 149 (169)
T 2vj2_A 114 WQCLCETNWGGQLCDKDLNYCGTHQPCLNGGTCSNT 149 (169)
T ss_dssp TCCEECTTEETTTTCEESCHHHHTCCCCTTCEEEEC
T ss_pred CEEeCCCCCCCCcccCCCCCCCCCCCCCCCCEEcCC
Confidence 899999999999998 6666653 1 223456664
No 43
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=98.31 E-value=3.2e-07 Score=55.65 Aligned_cols=50 Identities=24% Similarity=0.624 Sum_probs=41.3
Q ss_pred eeEEcCCceEEEcCCCCc-----------cCCCCCCC--CCCCeeEeCCCCeeeeCCCCCCCC
Q psy11060 29 NVIMLKSDYRLIIRPLYS-----------LCPCAYSP--CKHGSCVDKRAGYFCDCPPTYGGK 78 (155)
Q Consensus 29 ~c~~~~~~~~C~C~~g~~-----------~~~C~~~~--c~~~~C~~~~~~~~c~C~~g~~g~ 78 (155)
.|++..++|.|.|++||. +++|...| |.+++|++..++|.|.|++||.+.
T Consensus 17 ~C~n~~g~y~C~C~~Gy~~~~~~g~~C~dideC~~~~~~C~~~~C~n~~g~y~C~C~~G~~~~ 79 (86)
T 1lmj_A 17 QCVNTPGDFECKCDEGYESGFMMMKNCMDIDECQRDPLLCRGGVCHNTEGSYRCECPPGHQLS 79 (86)
T ss_dssp CEEEETTEEEECCCSSEEECTTTSSSEEECCHHHHCSSTTTTSEEEEETTEEEEESCTTSCCC
T ss_pred EEECCCCCEEeeCCCCcCccCCCCCccCCcccccCCCCcCCCCEeEcCCCCEEEECcCCcccC
Confidence 689999999999999996 34555455 654599999999999999999754
No 44
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=98.24 E-value=1.9e-07 Score=52.94 Aligned_cols=45 Identities=29% Similarity=0.528 Sum_probs=37.8
Q ss_pred cCCCCCCCCCCCCC--CeeecCccCCCCCCeEeeCCCCCC-CCCCCcCcccccC
Q psy11060 83 ELTGCVGPDTCLNG--GTCKPYLVDETQHRFNCTCPSGYH-GKICEKITTMSFS 133 (155)
Q Consensus 83 ~~~~C~~~~~c~~~--~~C~~~~~~~~~~~~~C~C~~g~~-g~~C~~~~~~~~~ 133 (155)
.+++|.+. ||.++ ++|. +..++|.|.|++||+ |..|+..++|...
T Consensus 10 ~~d~C~sn-PC~nga~gtC~-----~~~g~y~C~C~~Gy~~G~~C~~~~~C~~~ 57 (61)
T 2k2s_B 10 TPAACSSN-PCGPEAAGTCK-----ETNSGYICRCNQGYRISLDGTGNVTCIVR 57 (61)
T ss_dssp SCCHHHHC-SSCSSSCCEEE-----ECSSEEEEECCTTEEEEECSSSCEEEEES
T ss_pred CCCcCcCC-CCcCCCccccc-----cCCCceEeECCCCCccCCCCCCCCEeccc
Confidence 45678777 99998 8999 778899999999999 9999887776533
No 45
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=98.23 E-value=4.4e-07 Score=60.51 Aligned_cols=61 Identities=26% Similarity=0.557 Sum_probs=47.4
Q ss_pred cCCCCCCCCCCCCCCeeecCccCCCCCCeEeeCCCCCCCCCCCcCcccccC--CCceEe-ecCCCCCcce
Q psy11060 83 ELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICEKITTMSFS--GGSHIM-LNTTREEGYD 149 (155)
Q Consensus 83 ~~~~C~~~~~c~~~~~C~~~~~~~~~~~~~C~C~~g~~g~~C~~~~~~~~~--~~~~~~-~~~~~~~~~~ 149 (155)
++++|... +|.+++.|+ +..++|.|.|++||+|..|+++++|... +....| ++++..+...
T Consensus 47 dideC~~~-pC~n~g~C~-----~~~~~y~C~C~~G~~G~~C~~~deC~~~~~~C~~~C~~n~~g~y~C~ 110 (146)
T 1x7a_L 47 DGDQCEPN-PCLNGGLCK-----DDINSYECWCQVGFEGKNCELDATCNIKNGRCKQFCKTGADSKVLCS 110 (146)
T ss_dssp ---CCSSC-SSCTTCEEE-----ECSSCEEEECCSSEESTTTCEECCTTSGGGSCSSBCCCCSSSCCCCB
T ss_pred CcCcCCCC-CCCCCCEeE-----CCCCCEEEecCCCCcCCcCCCCccccCCCCCCcCCCCCCCCCCEEeE
Confidence 77899887 999999999 7788999999999999999999888753 334477 7777655544
No 46
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=98.23 E-value=1.4e-06 Score=44.69 Aligned_cols=35 Identities=43% Similarity=0.917 Sum_probs=31.2
Q ss_pred cCCCCCCCCCCC-eeEeCCCCeeeeCCCCCCCCCce
Q psy11060 47 LCPCAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCS 81 (155)
Q Consensus 47 ~~~C~~~~c~~~-~C~~~~~~~~c~C~~g~~g~~c~ 81 (155)
+++|..+||.++ +|++..+.|.|.|+++|.|..|+
T Consensus 3 ~d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~G~~Ce 38 (39)
T 1edm_B 3 GDQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCE 38 (39)
T ss_dssp CCTTTTCCCCTTCEEEEETTEEEEECCTTCCSTTSC
T ss_pred cccCCCCCCCCCCEeEcCCCceEeECCCCCcCCccC
Confidence 578888999986 99988899999999999999885
No 47
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=98.22 E-value=2.8e-08 Score=67.39 Aligned_cols=97 Identities=23% Similarity=0.506 Sum_probs=59.0
Q ss_pred cCCCC-CCCCCCCeeEeCCCCeeeeCCCCCC----CCCceecCCC--CCCC-CCC--CCCCeeecCccCCCCC----CeE
Q psy11060 47 LCPCA-YSPCKHGSCVDKRAGYFCDCPPTYG----GKNCSVELTG--CVGP-DTC--LNGGTCKPYLVDETQH----RFN 112 (155)
Q Consensus 47 ~~~C~-~~~c~~~~C~~~~~~~~c~C~~g~~----g~~c~~~~~~--C~~~-~~c--~~~~~C~~~~~~~~~~----~~~ 112 (155)
+|+|. .+||.+++|++..++|.|.|++||. |..|+ ++++ |... ++| ...+.|. +..+ +|.
T Consensus 3 ideC~~~~~C~~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~-d~~~~~C~~~~~~c~~~~~~~C~-----~~~~~~~~~~~ 76 (162)
T 1uzk_A 3 VNECLDPTTCISGNCVNTPGSYICDCPPDFELNPTRVGCV-DTRSGNCYLDIRPRGDNGDTACS-----NEIGVGVSKAS 76 (162)
T ss_dssp CCGGGSTTSSBTSEEEEETTEEEEECCTTCEECTTSSBEE-CCCCEEEEEEC----------CE-----EEEEEEECHHH
T ss_pred cccCCCCCCCCCCEeECCCCCEEEeCCCCCeECCCCCccc-CCCCCcccCCCcccCCCCCCccc-----CCcCCcccCce
Confidence 57787 4788756999999999999999997 78886 6665 6543 123 2345665 3322 345
Q ss_pred eeCCC---------------------------CCCCC----CCCcCcccccCC--Cc-eEeecCCCCCcce
Q psy11060 113 CTCPS---------------------------GYHGK----ICEKITTMSFSG--GS-HIMLNTTREEGYD 149 (155)
Q Consensus 113 C~C~~---------------------------g~~g~----~C~~~~~~~~~~--~~-~~~~~~~~~~~~~ 149 (155)
|.|++ ||++. .|.+++++.... .. ..++|++..+...
T Consensus 77 C~C~~G~~~~~~C~~C~~~~~~~y~C~C~~g~G~~~~~~~~~c~dideC~~~~~~C~~g~C~n~~gsy~C~ 147 (162)
T 1uzk_A 77 CCCSLGKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNPITVILEDIDECQELPGLCQGGKCINTFGSFQCR 147 (162)
T ss_dssp HHTTTCCEETTTTEECCCTTSHHHHHHCTTCTTEEECTTTCCEEECCHHHHCGGGGBTSEEEECSSCEEEE
T ss_pred eeCCCCCCcCCCcccCCCCCCCCceeECCCCCCcccCCCCCccCccccccCCCCCcCCCEeEcCCCCEEee
Confidence 55554 44432 467788876421 11 3788887665544
No 48
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=98.22 E-value=1.5e-06 Score=71.14 Aligned_cols=77 Identities=23% Similarity=0.498 Sum_probs=60.6
Q ss_pred eEEEcC----CCCccCCCC--C--------CCCCCC-eeEeCCCCeeeeCCCCCCCCCce--ecCCCCCCC--CCCCCCC
Q psy11060 37 YRLIIR----PLYSLCPCA--Y--------SPCKHG-SCVDKRAGYFCDCPPTYGGKNCS--VELTGCVGP--DTCLNGG 97 (155)
Q Consensus 37 ~~C~C~----~g~~~~~C~--~--------~~c~~~-~C~~~~~~~~c~C~~g~~g~~c~--~~~~~C~~~--~~c~~~~ 97 (155)
+.|.|. +||.+..|. . .+|.++ .|.. +.|.|.+||.|..|+ ...+.|... .+|.+++
T Consensus 504 g~C~C~~~~~~Gy~G~~Ce~~~~~C~~~~~~~C~~~G~C~~----g~C~C~~Gy~G~~CeC~~~~~~C~~~~g~~C~~~G 579 (690)
T 3fcs_B 504 GQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCSC----GDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRG 579 (690)
T ss_dssp SSEEECCCSSCCCBSTTSCBCSSCCCBSSSSBGGGSEEEET----TEEEECTTEESSSSCEECCCTTTBCTTSSBTSSSC
T ss_pred CeeEeecCCCCCeeCCCcCcccCcCcCCCCCCCCCCCEecC----CeeECcCCCcCCCCccCCCCCcccCCCCCCCCCCC
Confidence 689999 999977774 2 245543 7865 599999999999997 456778752 3799999
Q ss_pred eeecCccCCCCCCeEeeC-CCCCCCCCCCc
Q psy11060 98 TCKPYLVDETQHRFNCTC-PSGYHGKICEK 126 (155)
Q Consensus 98 ~C~~~~~~~~~~~~~C~C-~~g~~g~~C~~ 126 (155)
.|. . ..|.| ++||+|..|+.
T Consensus 580 ~C~-----~----g~C~C~~~Gy~G~~Ce~ 600 (690)
T 3fcs_B 580 KCE-----C----GSCVCIQPGSYGDTCEK 600 (690)
T ss_dssp EEE-----T----TEEECCSTTCBSTTSCB
T ss_pred EEe-----C----CEEECCCCCccCCCcCc
Confidence 998 3 48999 99999999986
No 49
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=98.16 E-value=4.6e-06 Score=45.81 Aligned_cols=41 Identities=27% Similarity=0.651 Sum_probs=33.5
Q ss_pred cCCCCCC---CCCCC-eeE--eCCCCeeeeCCCCCCCCCceecCCCC
Q psy11060 47 LCPCAYS---PCKHG-SCV--DKRAGYFCDCPPTYGGKNCSVELTGC 87 (155)
Q Consensus 47 ~~~C~~~---~c~~~-~C~--~~~~~~~c~C~~g~~g~~c~~~~~~C 87 (155)
+++|.+. ||.++ +|+ +..+.|.|.|++||.|..|+..+...
T Consensus 3 i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~~~~~ 49 (53)
T 1egf_A 3 YPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQTRDLRW 49 (53)
T ss_dssp ECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCCSSSSCCCSCCC
T ss_pred cccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCcCCcCCccCccc
Confidence 4677765 99986 998 67889999999999999998655443
No 50
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=98.14 E-value=1.1e-06 Score=46.90 Aligned_cols=40 Identities=33% Similarity=0.729 Sum_probs=30.3
Q ss_pred CCCCCC---CCCCCCCCeeecCccCCCCCCeEeeCCCCCCCCCCCcCc
Q psy11060 84 LTGCVG---PDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICEKIT 128 (155)
Q Consensus 84 ~~~C~~---~~~c~~~~~C~~~~~~~~~~~~~C~C~~g~~g~~C~~~~ 128 (155)
+++|.+ . ||.+ ++|... ...+.|.|.|++||+|.+|+..+
T Consensus 3 i~~C~~~~~~-pC~n-G~C~~~---~~~~~~~C~C~~GytG~~Ce~~~ 45 (46)
T 1k36_A 3 ITKCSSDMNG-YCLH-GQCIYL---VDMSQNYCRCEVGYTGVRCEHFF 45 (46)
T ss_dssp EECCCTTCCS-SCSS-EEEEEE---TTTTEEEEEECTTCSSTTSCCCC
T ss_pred cccCCCCCCC-CCCC-CEeecc---CCCCCEEEECCCCCccCCCCccc
Confidence 456766 5 9999 799721 12367999999999999998653
No 51
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=98.13 E-value=9.2e-07 Score=53.71 Aligned_cols=61 Identities=26% Similarity=0.544 Sum_probs=48.9
Q ss_pred cCCCCCCCCC--CCCCCeeecCccCCCCCCeEeeCCCCCC----CCCCCcCcccccCCCceEeecCCCCCcceE
Q psy11060 83 ELTGCVGPDT--CLNGGTCKPYLVDETQHRFNCTCPSGYH----GKICEKITTMSFSGGSHIMLNTTREEGYDI 150 (155)
Q Consensus 83 ~~~~C~~~~~--c~~~~~C~~~~~~~~~~~~~C~C~~g~~----g~~C~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (155)
++++|... + | +.+.|. +..++|.|.|++||+ |..|++++++........+++++..+....
T Consensus 2 dideC~~~-~~~C-~~~~C~-----n~~g~y~C~C~~G~~~~~~g~~C~dideC~~~~C~~~C~n~~g~y~C~C 68 (87)
T 1z6c_A 2 DVDECSLK-PSIC-GTAVCK-----NIPGDFECECPEGYRYNLKSKSCEDIDECSENMCAQLCVNYPGGYTCYC 68 (87)
T ss_dssp CSCSSSSS-SSSB-TTSSCC-----CBTTBCCCSSSTTCEEETTTTEEECCCHHHHSCCSSEECCCSSSCCEEC
T ss_pred ccccccCC-CCCC-CCCEeE-----CCCCCEEEECCCCceECCCCCcCCCcCeeCCCCCCCEEEccCCCEEEEC
Confidence 56788777 5 8 677898 788999999999999 889999999876555678999887665543
No 52
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=98.10 E-value=1.4e-06 Score=61.78 Aligned_cols=77 Identities=23% Similarity=0.456 Sum_probs=58.1
Q ss_pred eEEEcCCCCccCCCC--------------------CCCCCCC-eeEeCCCCeeeeCCCC------CCCCCceecCCCCCC
Q psy11060 37 YRLIIRPLYSLCPCA--------------------YSPCKHG-SCVDKRAGYFCDCPPT------YGGKNCSVELTGCVG 89 (155)
Q Consensus 37 ~~C~C~~g~~~~~C~--------------------~~~c~~~-~C~~~~~~~~c~C~~g------~~g~~c~~~~~~C~~ 89 (155)
..|.|.+||.+..|. ..+|.+. +|+. ..|.|.++ |.|..|+.+...|..
T Consensus 107 g~C~C~~G~~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~----g~C~C~~gw~~~~~~~G~~Ce~~~~~C~~ 182 (217)
T 2p28_B 107 GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC----GQCLCHTSDVPGKLIYGQYCECDTINCER 182 (217)
T ss_dssp TEEEECTTEESTTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEET----TEEEECCCCSTTCCEESTTSCEESSCSCE
T ss_pred CEEECCCCccCCcccccCcccccccCCCcCCCCCCCCCCCCCCEEeC----CceECCCCCCCcccEECCCcccCCccCCC
Confidence 579999999976663 1345553 7774 28999999 589999866677864
Q ss_pred C--CCCCCC--CeeecCccCCCCCCeEeeCCCCCCCCCCCc
Q psy11060 90 P--DTCLNG--GTCKPYLVDETQHRFNCTCPSGYHGKICEK 126 (155)
Q Consensus 90 ~--~~c~~~--~~C~~~~~~~~~~~~~C~C~~g~~g~~C~~ 126 (155)
. .+|..+ +.|. . ..|.|.+||+|..|+.
T Consensus 183 ~~g~~C~~~~~G~C~-----~----g~C~C~~G~~G~~C~~ 214 (217)
T 2p28_B 183 YNGQVCGGPGRGLCF-----C----GKCRCHPGFEGSACQH 214 (217)
T ss_dssp ETTEETTCTTTEEEE-----T----TEEEECTTEESTTSCE
T ss_pred CCCCCCCCCCCcEEe-----C----CeeECCCCCccCCcCC
Confidence 3 258877 8997 2 4899999999999974
No 53
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=98.04 E-value=4.7e-06 Score=44.15 Aligned_cols=36 Identities=25% Similarity=0.584 Sum_probs=29.8
Q ss_pred CCCCC---CCCCC-eeE--eCCCCeeeeCCCCCCCCCceecC
Q psy11060 49 PCAYS---PCKHG-SCV--DKRAGYFCDCPPTYGGKNCSVEL 84 (155)
Q Consensus 49 ~C~~~---~c~~~-~C~--~~~~~~~c~C~~g~~g~~c~~~~ 84 (155)
+|... ||.++ +|+ +..+.|.|.|+++|.|..|+.++
T Consensus 2 ~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~~ 43 (45)
T 1a3p_A 2 GXPSSYDGYCLNGGVXMHIESLDSYTCNCVIGYSGDRCQTRD 43 (45)
T ss_dssp CCTTCCSSCCSSSCEEEECTTTSSEEEECCTTEETTTTCEEC
T ss_pred CcccCCCCCCCCCCEEEeecCCCCEEEEcCCCCcCCcCCccc
Confidence 56666 99986 998 56788999999999999998654
No 54
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=98.03 E-value=1.1e-05 Score=44.25 Aligned_cols=42 Identities=36% Similarity=0.914 Sum_probs=32.4
Q ss_pred CCCCCCC--CCCCCCCeeecCccCCCCCCeEeeCCCCCCCCCCCcCc
Q psy11060 84 LTGCVGP--DTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICEKIT 128 (155)
Q Consensus 84 ~~~C~~~--~~c~~~~~C~~~~~~~~~~~~~C~C~~g~~g~~C~~~~ 128 (155)
+++|.+. .||.++++|... +..++|.|.|++||+|..|+..+
T Consensus 3 i~~C~~~~~~pC~ngg~C~~~---~~~~~~~C~C~~G~~G~~Ce~~~ 46 (53)
T 1egf_A 3 YPGCPSSYDGYCLNGGVCMHI---ESLDSYTCNCVIGYSGDRCQTRD 46 (53)
T ss_dssp ECCCCTTSSCSSCSSCEEEEE---SSSSCEEEECCTTCCSSSSCCCS
T ss_pred cccCCCCCCCcCCCCcEEEee---CCCCCEEEECCCCCcCCcCCccC
Confidence 4566653 489999999721 24678999999999999998754
No 55
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=98.02 E-value=6.6e-06 Score=67.29 Aligned_cols=76 Identities=29% Similarity=0.721 Sum_probs=58.5
Q ss_pred EEEcC------CCCccCCCC--CCC--------CCC---CeeEeCCCCeeeeCCCCCCCCCcee--cCCCCCCC--CCCC
Q psy11060 38 RLIIR------PLYSLCPCA--YSP--------CKH---GSCVDKRAGYFCDCPPTYGGKNCSV--ELTGCVGP--DTCL 94 (155)
Q Consensus 38 ~C~C~------~g~~~~~C~--~~~--------c~~---~~C~~~~~~~~c~C~~g~~g~~c~~--~~~~C~~~--~~c~ 94 (155)
.|.|. +||.+..|. ... |.+ |.|... .|.|.+||.|..|+. ....|... .+|.
T Consensus 494 ~C~C~~~~~~~~G~~G~~Ce~~~~~C~~~~~~~C~~~~~G~C~~g----~C~C~~G~~G~~Cec~~~~~~C~~~~g~~Cs 569 (687)
T 3k6s_B 494 QCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFCG----KCRCHPGFEGSACQCERTTEGCLNPRRVECS 569 (687)
T ss_dssp EEEECCCCSTTCCEESTTSCEESSCSCEETTEETSHHHHEEEETT----EEEECTTCCSTTSCSCCSSCTTBCTTCSBTS
T ss_pred EEEcCCCCCCCCCccccccccccccccCCCCcCcCCCCCCeEECC----EEEcCCCCcCCCCccCCCCCCCCCCCCCCCC
Confidence 89999 999988885 333 443 367642 899999999999972 24567642 3688
Q ss_pred CCCeeecCccCCCCCCeEeeCCCCCCCCCCCc
Q psy11060 95 NGGTCKPYLVDETQHRFNCTCPSGYHGKICEK 126 (155)
Q Consensus 95 ~~~~C~~~~~~~~~~~~~C~C~~g~~g~~C~~ 126 (155)
+++.|. . +.|.|++||+|..|+.
T Consensus 570 ~~G~C~-----~----g~C~C~~Gy~G~~Ce~ 592 (687)
T 3k6s_B 570 GRGRCR-----C----NVCECHSGYQLPLCQE 592 (687)
T ss_dssp SSCCBC-----S----SCBCCSTTCCTTTTCC
T ss_pred CCCcCC-----C----CEEECCCCCcCCCCCC
Confidence 889997 2 5799999999999986
No 56
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=98.02 E-value=2.3e-06 Score=63.72 Aligned_cols=61 Identities=26% Similarity=0.641 Sum_probs=48.4
Q ss_pred cCCCCCCCCCCCCCCeeecCccCCCCCCeEeeCCCCCCCCCCC-cCccccc---CCCceEeecCCCCCcce
Q psy11060 83 ELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICE-KITTMSF---SGGSHIMLNTTREEGYD 149 (155)
Q Consensus 83 ~~~~C~~~~~c~~~~~C~~~~~~~~~~~~~C~C~~g~~g~~C~-~~~~~~~---~~~~~~~~~~~~~~~~~ 149 (155)
++++|... ||.+++.|. +..++|.|.|++||+|..|+ ++++|.. ......|++.+..+.+.
T Consensus 4 d~~~C~~~-pC~~~g~C~-----~~~~~~~C~C~~g~~g~~C~~~~~eC~~~~~~~C~~~C~~~~g~~~C~ 68 (317)
T 3h5c_B 4 GGSPCISQ-PCLHNGSCQ-----DSIWGYTCTCSPGYEGSNCELAKNECHPERTDGCQHFCLPGQESYTCS 68 (317)
T ss_dssp --CCTTSC-CCTTTCCCC-----CCSSSCCCCCSSSCCSSSSCCCSSSCCTTCTTSCSSEEECCSSSCEEE
T ss_pred cCCcCCCC-CCCCCCEeE-----CCCCCeEEECCCCCcCCccccCcccCCCCCCCCCcCccccCCCeeEEe
Confidence 56789888 999999998 67788999999999999998 8888876 33445888887665544
No 57
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=98.01 E-value=1.8e-06 Score=49.23 Aligned_cols=47 Identities=23% Similarity=0.523 Sum_probs=33.5
Q ss_pred CCCCCCCCCCCCCeeecCccCCCCCCeEeeCCCCCCCCCCCc-Cccccc
Q psy11060 85 TGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICEK-ITTMSF 132 (155)
Q Consensus 85 ~~C~~~~~c~~~~~C~~~~~~~~~~~~~C~C~~g~~g~~C~~-~~~~~~ 132 (155)
++|... ||.++++|....-.+..++|.|.|++||+|..|+. ++++.+
T Consensus 7 ~~C~~~-pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce~~i~~~~~ 54 (63)
T 1hae_A 7 AEKEKT-FCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVPMKVQ 54 (63)
T ss_dssp CHHHHT-TSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCEECCSSCT
T ss_pred CCCCCC-cCCCCcEEecCCccCCCCCEEEECCCCCcCCccCcCcCcccc
Confidence 456666 99999999821000145789999999999999974 455544
No 58
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=98.00 E-value=2.3e-06 Score=48.78 Aligned_cols=43 Identities=23% Similarity=0.608 Sum_probs=35.6
Q ss_pred CCCCCCCCCCC-eeEe-----CCCCeeeeCCCCCCCCCceecCCCCCCC
Q psy11060 48 CPCAYSPCKHG-SCVD-----KRAGYFCDCPPTYGGKNCSVELTGCVGP 90 (155)
Q Consensus 48 ~~C~~~~c~~~-~C~~-----~~~~~~c~C~~g~~g~~c~~~~~~C~~~ 90 (155)
++|..+||.++ +|+. ..+.|.|.|++||.|..|+.+++++...
T Consensus 7 ~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce~~i~~~~~~ 55 (63)
T 1hae_A 7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVPMKVQN 55 (63)
T ss_dssp CHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCEECCSSCTT
T ss_pred CCCCCCcCCCCcEEecCCccCCCCCEEEECCCCCcCCccCcCcCccccc
Confidence 55677899986 9986 5678999999999999998887777544
No 59
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=97.98 E-value=1.3e-06 Score=55.68 Aligned_cols=61 Identities=26% Similarity=0.614 Sum_probs=43.5
Q ss_pred cCCCCCCCCC--------CCCCCeeecCccCCCCCCeEeeCCCCCCCCCCCcCcc---cccC--CCceEeecCCCCCcce
Q psy11060 83 ELTGCVGPDT--------CLNGGTCKPYLVDETQHRFNCTCPSGYHGKICEKITT---MSFS--GGSHIMLNTTREEGYD 149 (155)
Q Consensus 83 ~~~~C~~~~~--------c~~~~~C~~~~~~~~~~~~~C~C~~g~~g~~C~~~~~---~~~~--~~~~~~~~~~~~~~~~ 149 (155)
++++|... + |.+++.|+ +..++|.|.|++||+|..|+++++ +... +....|++++..+...
T Consensus 5 d~d~C~~~-p~~~~C~~~C~~~g~C~-----~~~~~y~C~C~~G~~G~~C~~~~~~~~C~~~~~~C~~~C~n~~g~y~C~ 78 (114)
T 1aut_L 5 DGDQCLVL-PLEHPCASLCCGHGTCI-----DGIGSFSCDCRSGWEGRFCQREVSFLNCSLDNGGCTHYCLEEVGWRRCS 78 (114)
T ss_dssp ---CCCCC-SSCCSSSSTTTTSEEEC-----CCSSCCCEEECTTEESTTSCEECCSSSSSSGGGGCSSEEEECSSSEEEE
T ss_pred ecccccCC-CccccccccCCCcCCCC-----CCCCCcEeeCCCCCcCCCcCcCCcCCcCcCCCCCCCCEeECCCCCEEeE
Confidence 45566666 6 88999998 778899999999999999998653 5532 2344788887655443
No 60
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.96 E-value=1.1e-06 Score=68.92 Aligned_cols=77 Identities=29% Similarity=0.669 Sum_probs=32.3
Q ss_pred EEEcCCCCccCCCCCC----CCCCCeeEeCCCCeeeeCCCCCCCCCceecCCCCCCCCCCCCCCeeecCccCCCCCCeEe
Q psy11060 38 RLIIRPLYSLCPCAYS----PCKHGSCVDKRAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNC 113 (155)
Q Consensus 38 ~C~C~~g~~~~~C~~~----~c~~~~C~~~~~~~~c~C~~g~~g~~c~~~~~~C~~~~~c~~~~~C~~~~~~~~~~~~~C 113 (155)
.+.|..+|.+..|... +|.++.|+.. ..|.|.++|.|..|+. ..|.. +|.+++.|. + .+.|
T Consensus 378 p~~C~~~~~g~~c~~~~C~~~C~nG~C~~~---~~C~C~~G~~G~~C~~--~~C~~--~C~~~g~C~-----~---~~~C 442 (463)
T 2wg3_C 378 PEECRATVQPAQTLTSECSRLCRNGYCTPT---GKCCCSPGWEGDFCRT--AKCEP--ACRHGGVCV-----R---PNKC 442 (463)
T ss_dssp CGGGCCCCCCCCCCCCHHHHHCCSEEECTT---SCEEECTTEESTTSCE--ECC--------------------------
T ss_pred cccCCCCCcCCCCccccccCCCCCCccCCC---CeECCCCCcCCCcCCc--CcCCC--CCCCCCEEC-----C---CCEE
Confidence 3568888876655432 4666788642 4899999999999963 56865 799999998 2 3789
Q ss_pred eCCCCCCCCCCCcCcc
Q psy11060 114 TCPSGYHGKICEKITT 129 (155)
Q Consensus 114 ~C~~g~~g~~C~~~~~ 129 (155)
.|++||+|..|+..+.
T Consensus 443 ~C~~G~~G~~C~~~~~ 458 (463)
T 2wg3_C 443 LCKKGYLGPQCEQVDH 458 (463)
T ss_dssp ----------------
T ss_pred ECCCCcccCCCCCCcc
Confidence 9999999999987653
No 61
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=97.93 E-value=2.3e-06 Score=56.74 Aligned_cols=61 Identities=23% Similarity=0.567 Sum_probs=45.9
Q ss_pred cCCCCCCCCCCCCCCeeecCccCCCCCCeEeeCCCCCCCCCCCc-Cccc---c-cC-CCceEeecCCC-CCcce
Q psy11060 83 ELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICEK-ITTM---S-FS-GGSHIMLNTTR-EEGYD 149 (155)
Q Consensus 83 ~~~~C~~~~~c~~~~~C~~~~~~~~~~~~~C~C~~g~~g~~C~~-~~~~---~-~~-~~~~~~~~~~~-~~~~~ 149 (155)
++++|... +|.+++.|+ +..++|.|.|++||+|..|++ ++++ . .. +..+.|++++. .+...
T Consensus 46 did~C~~~-pC~n~g~C~-----~~~g~y~C~C~~G~~G~~C~~~~~~c~~c~~~~~~C~~~C~~~~g~~y~C~ 113 (142)
T 2c4f_L 46 DGDQCASS-PCQNGGSCK-----DQLQSYICFCLPAFEGRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCR 113 (142)
T ss_dssp TCCGGGGC-CCCTTCEEE-----EETTEEEEECCTTEESTTSCEEGGGCCSTTTGGGGCSSEEECCTTSCCEEE
T ss_pred ccCcCcCC-CcCCCCEEe-----CCCCCEEeeCCCCccCCccccCccccccccCCCCCccCEeECCCCCCEEEE
Confidence 56788877 999999999 778899999999999999987 3553 2 12 22347888876 55443
No 62
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=97.93 E-value=3.3e-06 Score=53.32 Aligned_cols=75 Identities=17% Similarity=0.339 Sum_probs=35.5
Q ss_pred CCCCCCCCCceecCCCCCCC-CCCCCCCeeecCccCCCCCCeEeeCCCCCCC---CCCCcCccccc-CCCceEeecCCCC
Q psy11060 71 CPPTYGGKNCSVELTGCVGP-DTCLNGGTCKPYLVDETQHRFNCTCPSGYHG---KICEKITTMSF-SGGSHIMLNTTRE 145 (155)
Q Consensus 71 C~~g~~g~~c~~~~~~C~~~-~~c~~~~~C~~~~~~~~~~~~~C~C~~g~~g---~~C~~~~~~~~-~~~~~~~~~~~~~ 145 (155)
...+|.+..| ++++|... ..|. ..|+ +..++|.|.|++||++ ..|++++++.. ......|+|++..
T Consensus 18 ~~~~~~~~~C--d~neC~~~~~~C~--~~C~-----n~~g~y~C~C~~Gy~g~~g~~C~dideC~~~~~C~~~C~n~~gs 88 (107)
T 2w2n_E 18 TENLYFQGAM--GTNECLDNNGGCS--YVCN-----DLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCSQLCVNLEGG 88 (107)
T ss_dssp --CCCCSCCB--SCCGGGTGGGGCS--SEEE-----CCSBSCEEECCTTCEEETTTEEEC--------------------
T ss_pred cCCCcCCCCC--cCccCcCCCCCCC--CEeE-----eCCCCeEEECCCCccccCCCccccccccCCCCCcCCeeecCCCC
Confidence 3456777888 56788754 2454 4798 7888999999999997 88999999974 3335688888877
Q ss_pred CcceEEEEe
Q psy11060 146 EGYDISFIL 154 (155)
Q Consensus 146 ~~~~~~~~~ 154 (155)
+.......|
T Consensus 89 y~C~C~~Gy 97 (107)
T 2w2n_E 89 YKCQCEEGF 97 (107)
T ss_dssp ---------
T ss_pred EEEECCCCc
Confidence 766654443
No 63
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.91 E-value=2.2e-05 Score=65.43 Aligned_cols=74 Identities=28% Similarity=0.867 Sum_probs=56.2
Q ss_pred CCCCCCCCCC------eeEeCCCCeeeeCCCCCC---CCCceecCCCCCCCCCCCCCCeeecCccCCCCCCeEeeCCCCC
Q psy11060 49 PCAYSPCKHG------SCVDKRAGYFCDCPPTYG---GKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGY 119 (155)
Q Consensus 49 ~C~~~~c~~~------~C~~~~~~~~c~C~~g~~---g~~c~~~~~~C~~~~~c~~~~~C~~~~~~~~~~~~~C~C~~g~ 119 (155)
.|..++|..+ .|++..++|.|.|++||. |..|+ ++++|....+|. ..|. +..++|.|.|++||
T Consensus 309 ~C~~~~C~~~~~~C~~~C~~~~~~y~C~C~~Gy~l~~g~~C~-dideC~~~~~C~--~~C~-----n~~gsy~C~C~~Gy 380 (791)
T 3m0c_C 309 ECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCE-DIDECQDPDTCS--QLCV-----NLEGGYKCQCEEGF 380 (791)
T ss_dssp TBSCCSTTTGGGGCSSEEEECSBSEEEECCTTCEEETTTEEE-CCCCCSSSSSCT--TTCC-----BCSSCBCCCCCSSE
T ss_pred ccccccccccccCccccccCCCCCcccCCCCCCccCCCCccc-cCcccCCCCCCC--Ceee-----cCCCCceeecCCCC
Confidence 3555566431 799999999999999994 78886 889997433564 4788 88999999999999
Q ss_pred C----CCCCCcCccc
Q psy11060 120 H----GKICEKITTM 130 (155)
Q Consensus 120 ~----g~~C~~~~~~ 130 (155)
. +..|..+.+.
T Consensus 381 ~l~~~~~~C~~~~~~ 395 (791)
T 3m0c_C 381 QLDPHTKACKAVGSI 395 (791)
T ss_dssp ECCSSCCCCEETTSC
T ss_pred EeCCCCceeeecccc
Confidence 7 4567665543
No 64
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=97.89 E-value=5.9e-07 Score=49.26 Aligned_cols=46 Identities=28% Similarity=0.691 Sum_probs=32.5
Q ss_pred eeeCCCCCCCCCceecCCCCCCCCCCCCCCeeecCccCCCCCCeEeeCCCCCCCCCCCcC
Q psy11060 68 FCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICEKI 127 (155)
Q Consensus 68 ~c~C~~g~~g~~c~~~~~~C~~~~~c~~~~~C~~~~~~~~~~~~~C~C~~g~~g~~C~~~ 127 (155)
.|.|+++|. .. +|.++++|..... ...+.|.|.|++||+|.+|+..
T Consensus 4 ~C~C~~g~~------------~~-pC~NGGtC~~~~~-~~~~~y~C~C~~Gf~G~~Ce~~ 49 (52)
T 3ca7_A 4 TYKCPETFD------------AW-YCLNDAHCFAVKI-ADLPVYSCECAIGFMGQRCEYK 49 (52)
T ss_dssp CBCCCHHHH------------HH-TSCTTCEEEEEEE-TTEEEEEEECCTTEESTTSCEE
T ss_pred eeECCCCCc------------CC-cCCCCCEEecCcc-CCCCCEEEECCCCCcCCCCccc
Confidence 566776663 33 8999999982100 0235789999999999999854
No 65
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=97.86 E-value=2.1e-05 Score=41.57 Aligned_cols=33 Identities=36% Similarity=0.870 Sum_probs=27.3
Q ss_pred CCCCCCeeecCccCCCCCCeEeeCCCCCCCCCCCcC
Q psy11060 92 TCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICEKI 127 (155)
Q Consensus 92 ~c~~~~~C~~~~~~~~~~~~~C~C~~g~~g~~C~~~ 127 (155)
||.+++.|... +..++|.|.|++||+|.+|+..
T Consensus 10 pC~ngg~C~~~---~~~~~~~C~C~~G~~G~~Ce~~ 42 (45)
T 1a3p_A 10 YCLNGGVXMHI---ESLDSYTCNCVIGYSGDRCQTR 42 (45)
T ss_dssp CCSSSCEEEEC---TTTSSEEEECCTTEETTTTCEE
T ss_pred CCCCCCEEEee---cCCCCEEEEcCCCCcCCcCCcc
Confidence 89999999721 3567899999999999999754
No 66
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=97.84 E-value=6.9e-06 Score=67.15 Aligned_cols=76 Identities=24% Similarity=0.476 Sum_probs=58.8
Q ss_pred eEEEcCCCCccCCCC----------------CC----CCCCC-eeEeCCCCeeeeCC------CCCCCCCceecCCCCCC
Q psy11060 37 YRLIIRPLYSLCPCA----------------YS----PCKHG-SCVDKRAGYFCDCP------PTYGGKNCSVELTGCVG 89 (155)
Q Consensus 37 ~~C~C~~g~~~~~C~----------------~~----~c~~~-~C~~~~~~~~c~C~------~g~~g~~c~~~~~~C~~ 89 (155)
..|.|.+||.+..|. .. +|.++ .|+. + .|.|. ++|.|..|+.+...|..
T Consensus 446 g~C~C~~Gy~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~--G--~C~C~~~~~~~~G~~G~~Ce~~~~~C~~ 521 (687)
T 3k6s_B 446 GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC--G--QCLCHTSDVPGKLIYGQYCECDTINCER 521 (687)
T ss_dssp SSEEECSSEESTTSCEESSSCCCSGGGSTTSSSTTSCGGGSSEEEET--T--EEEECCCCSTTCCEESTTSCEESSCSCE
T ss_pred CEeEcCCCCcCCcccccCCcCCccccCCCCCCCCCCCcCCCCCEEeC--C--EEEcCCCCCCCCCccccccccccccccC
Confidence 579999999976664 11 25554 7873 2 89999 99999999877778873
Q ss_pred C--CCCCC--CCeeecCccCCCCCCeEeeCCCCCCCCCCC
Q psy11060 90 P--DTCLN--GGTCKPYLVDETQHRFNCTCPSGYHGKICE 125 (155)
Q Consensus 90 ~--~~c~~--~~~C~~~~~~~~~~~~~C~C~~g~~g~~C~ 125 (155)
. .+|.+ ++.|. . ..|.|++||+|..|+
T Consensus 522 ~~~~~C~~~~~G~C~-----~----g~C~C~~G~~G~~Ce 552 (687)
T 3k6s_B 522 YNGQVCGGPGRGLCF-----C----GKCRCHPGFEGSACQ 552 (687)
T ss_dssp ETTEETSHHHHEEEE-----T----TEEEECTTCCSTTSC
T ss_pred CCCcCcCCCCCCeEE-----C----CEEEcCCCCcCCCCc
Confidence 2 26887 88997 2 489999999999998
No 67
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=97.83 E-value=9e-06 Score=43.27 Aligned_cols=36 Identities=28% Similarity=0.783 Sum_probs=28.7
Q ss_pred cCCCCC---CCCCCCeeEeC--CCCeeeeCCCCCCCCCcee
Q psy11060 47 LCPCAY---SPCKHGSCVDK--RAGYFCDCPPTYGGKNCSV 82 (155)
Q Consensus 47 ~~~C~~---~~c~~~~C~~~--~~~~~c~C~~g~~g~~c~~ 82 (155)
+++|.. +||.+|+|... .+.|.|.|++||+|.+|+.
T Consensus 3 i~~C~~~~~~pC~nG~C~~~~~~~~~~C~C~~GytG~~Ce~ 43 (46)
T 1k36_A 3 ITKCSSDMNGYCLHGQCIYLVDMSQNYCRCEVGYTGVRCEH 43 (46)
T ss_dssp EECCCTTCCSSCSSEEEEEETTTTEEEEEECTTCSSTTSCC
T ss_pred cccCCCCCCCCCCCCEeeccCCCCCEEEECCCCCccCCCCc
Confidence 456766 89988888864 3679999999999999974
No 68
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=97.80 E-value=1.2e-06 Score=61.09 Aligned_cols=60 Identities=25% Similarity=0.543 Sum_probs=11.7
Q ss_pred cCCCCCCCCCCCCCCeeecCccCCCCCCeEeeCCCCCCCCCCCcC--cccccC--CCceEeecCCCCCcc
Q psy11060 83 ELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICEKI--TTMSFS--GGSHIMLNTTREEGY 148 (155)
Q Consensus 83 ~~~~C~~~~~c~~~~~C~~~~~~~~~~~~~C~C~~g~~g~~C~~~--~~~~~~--~~~~~~~~~~~~~~~ 148 (155)
++++|... +|.+++.|. +..++|.|.|++||+|..|++. ++|... +....|++.+..+..
T Consensus 41 dideC~~~-pC~ngg~C~-----n~~g~y~C~C~~Gf~G~~Ce~~i~deC~~~~~~C~~~C~n~~gsy~C 104 (195)
T 1nfu_B 41 DGDQCETS-PCQNQGKCK-----DGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQFCHEEQNSVVC 104 (195)
T ss_dssp ----------------------------------------------CCGGGTGGGGCSSEEEEETTEEEE
T ss_pred CCcccCCC-CCCCCCEeE-----CCCCCeeEeCCCCceeccccccccccccCCCCCCCCEeECCCCCeEE
Confidence 77899887 999999998 7788999999999999999874 667642 234477777654443
No 69
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=97.70 E-value=2.1e-06 Score=56.33 Aligned_cols=59 Identities=25% Similarity=0.546 Sum_probs=10.6
Q ss_pred cCCCCCCCCCCCCCCeeecCccCCCCCCeEeeCCCCCCCCCCCc-C-cccccC--CCceEeecCCCCCc
Q psy11060 83 ELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICEK-I-TTMSFS--GGSHIMLNTTREEG 147 (155)
Q Consensus 83 ~~~~C~~~~~c~~~~~C~~~~~~~~~~~~~C~C~~g~~g~~C~~-~-~~~~~~--~~~~~~~~~~~~~~ 147 (155)
++++|... +|.+++.|+ +..++|.|.|++||+|..|++ + +++... +....|++++..+.
T Consensus 41 d~d~C~~~-pC~n~g~C~-----~~~~~y~C~C~~G~~G~~C~~~i~d~C~~~~~~C~~~C~~~~g~y~ 103 (134)
T 2vh0_B 41 DGDQCETS-PCQNQGKCK-----DGLGEYTCTCLEGFEGKNCELFTRKLCSLDNGDCDQFCHEEQNSVV 103 (134)
T ss_dssp ----------------------------------------------CCGGGTGGGGCSSEEEEETTEEE
T ss_pred CcCcCCCC-CCCCcCCcc-----cCCCCEEeeCCCCccCCccccCCCCccccCCCCCCCEeECCCCCEE
Confidence 67889887 999999998 778899999999999999998 4 667542 22347777765433
No 70
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=97.63 E-value=2.7e-06 Score=46.54 Aligned_cols=41 Identities=17% Similarity=0.430 Sum_probs=32.7
Q ss_pred eEEEcCCCCccCCCCCCCCCCC-eeEe----CCCCeeeeCCCCCCCCCcee
Q psy11060 37 YRLIIRPLYSLCPCAYSPCKHG-SCVD----KRAGYFCDCPPTYGGKNCSV 82 (155)
Q Consensus 37 ~~C~C~~g~~~~~C~~~~c~~~-~C~~----~~~~~~c~C~~g~~g~~c~~ 82 (155)
+.|.|++||. .+||.++ +|+. ..+.|.|.|+++|.|.+|+.
T Consensus 3 ~~C~C~~g~~-----~~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce~ 48 (52)
T 3ca7_A 3 PTYKCPETFD-----AWYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEY 48 (52)
T ss_dssp CCBCCCHHHH-----HHTSCTTCEEEEEEETTEEEEEEECCTTEESTTSCE
T ss_pred eeeECCCCCc-----CCcCCCCCEEecCccCCCCCEEEECCCCCcCCCCcc
Confidence 4578888876 4578886 9986 34578999999999999974
No 71
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.56 E-value=8.6e-05 Score=61.02 Aligned_cols=61 Identities=31% Similarity=0.917 Sum_probs=49.5
Q ss_pred eeEeCCCCeeeeCCCCCC---CCCceecCCCCCCCCCCCCCCeeecCccCCCCCCeEeeCCCCCCC----CCCCcC
Q psy11060 59 SCVDKRAGYFCDCPPTYG---GKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHG----KICEKI 127 (155)
Q Consensus 59 ~C~~~~~~~~c~C~~g~~---g~~c~~~~~~C~~~~~c~~~~~C~~~~~~~~~~~~~C~C~~g~~g----~~C~~~ 127 (155)
.|++..++|.|.|++||. +..|+ ++++|....+|.. .|. ++.++|.|.|++||++ ..|..+
T Consensus 307 ~C~~~~~~~~C~C~~G~~~~~~~~C~-dideC~~~~~C~~--~C~-----n~~g~y~C~C~~G~~~~~~~~~C~~~ 374 (699)
T 1n7d_A 307 VCNDLKIGYECLCPDGFQLVAQRRCE-DIDECQDPDTCSQ--LCV-----NLEGGYKCQCEEGFQLDPHTKACKAV 374 (699)
T ss_dssp TCCCCTTCCCCCCCSSSCCCSSSCCC-CCCCCSSSSSCTT--TCC-----BCSSCBCCCCCSSCBCCSSCCCCBCC
T ss_pred CcccCCCCcEEeCCCCeEcCCCCccc-CccccCCCCcccc--ccc-----cCCCCeeeeeecccccCCCCCccccc
Confidence 688888999999999997 77887 8899974337753 788 8899999999999983 456544
No 72
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=97.56 E-value=2.6e-05 Score=42.76 Aligned_cols=35 Identities=31% Similarity=0.800 Sum_probs=28.1
Q ss_pred CCCCCCeeecCccCCCCCCeEeeCCCCCCCCCCCcCcc
Q psy11060 92 TCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICEKITT 129 (155)
Q Consensus 92 ~c~~~~~C~~~~~~~~~~~~~C~C~~g~~g~~C~~~~~ 129 (155)
||.++++|... +..++|.|.|++||+|.+|+..+.
T Consensus 13 pC~nGG~C~~~---~~~~~~~C~C~~GytG~~Ce~~~~ 47 (53)
T 1nql_B 13 YCLHDGVCMYI---EALDKYACNCVVGYIGERCQYRDL 47 (53)
T ss_dssp EECTTCEEEEE---TTTTEEEEEECTTEESTTSCEECS
T ss_pred CCCCCeEEeee---cCCCCEEEecCCCCcCCCCCcCCc
Confidence 89999999621 245679999999999999986543
No 73
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=97.53 E-value=6.6e-06 Score=46.50 Aligned_cols=35 Identities=26% Similarity=0.804 Sum_probs=29.9
Q ss_pred cCCCCCCCCCCC---eeEeCCCCeeeeCCCCCC-CCCce
Q psy11060 47 LCPCAYSPCKHG---SCVDKRAGYFCDCPPTYG-GKNCS 81 (155)
Q Consensus 47 ~~~C~~~~c~~~---~C~~~~~~~~c~C~~g~~-g~~c~ 81 (155)
+++|.++||.++ +|++..++|.|.|++||. |..|+
T Consensus 11 ~d~C~snPC~nga~gtC~~~~g~y~C~C~~Gy~~G~~C~ 49 (61)
T 2k2s_B 11 PAACSSNPCGPEAAGTCKETNSGYICRCNQGYRISLDGT 49 (61)
T ss_dssp CCHHHHCSSCSSSCCEEEECSSEEEEECCTTEEEEECSS
T ss_pred CCcCcCCCCcCCCccccccCCCceEeECCCCCccCCCCC
Confidence 577888899874 899998999999999998 88885
No 74
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=97.45 E-value=3.5e-05 Score=51.71 Aligned_cols=41 Identities=29% Similarity=0.748 Sum_probs=34.9
Q ss_pred CCCCCCCCCCCCCeeecCccCCCCCCeEeeCCCCCCCCCCCcCcccc
Q psy11060 85 TGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICEKITTMS 131 (155)
Q Consensus 85 ~~C~~~~~c~~~~~C~~~~~~~~~~~~~C~C~~g~~g~~C~~~~~~~ 131 (155)
.+|... +|.+++.|. +..++|.|.|++||.|..|+++++|.
T Consensus 120 ~~c~~~-~C~~~g~C~-----~~~~~~~c~C~~g~~G~~Ce~~~~c~ 160 (162)
T 1g1s_A 120 ASCQDM-SCSKQGECL-----ETIGNYTCSCYPGFYGPECEYVRDDD 160 (162)
T ss_dssp CCCCTT-GGGGSEEEE-----ECSSSEEEEECTTEESTTSCEECC--
T ss_pred CCCcCC-CCCCCCEEe-----cCCCCceEeCCCCCcCcccccCcccC
Confidence 467777 999999999 77889999999999999999998875
No 75
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.43 E-value=3.9e-05 Score=58.92 Aligned_cols=59 Identities=19% Similarity=0.450 Sum_probs=46.1
Q ss_pred CCCCCCCCCCCCCeeecCccCCCCCCeEeeCCCCCC---CCCCCcCccccc-CCCceEeecCCCCCcce
Q psy11060 85 TGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYH---GKICEKITTMSF-SGGSHIMLNTTREEGYD 149 (155)
Q Consensus 85 ~~C~~~~~c~~~~~C~~~~~~~~~~~~~C~C~~g~~---g~~C~~~~~~~~-~~~~~~~~~~~~~~~~~ 149 (155)
++|... ++..++.|. +..++|.|.|++||+ |..|++++||.. ......|+|++..+.+.
T Consensus 1 ~eC~~~-~~~c~~~C~-----~~~~~y~C~C~~G~~~~~~~~C~dideC~~~~~C~~~C~n~~g~~~C~ 63 (400)
T 3p5b_L 1 NECLDN-NGGCSHVCN-----DLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQ 63 (400)
T ss_dssp CCTTTT-GGGCSSEEE-----ECSSSEEEECCTTEEECSSSCEEECCCCSTTSSCSSCCBCCSSSCBCC
T ss_pred CcccCC-CCCCCCEeE-----CCCCCeEEECCCCCCcCCCCcccCchhhhccCCCCCccCCCccceeee
Confidence 357666 666667999 788999999999998 899999999973 34466888887665544
No 76
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=97.34 E-value=2.1e-05 Score=62.59 Aligned_cols=87 Identities=18% Similarity=0.407 Sum_probs=27.3
Q ss_pred ceEE-EcCCCCccCCCC------CCCCCCC-eeEeC----CCCeeeeCCCCCCCCCcee----------cCCCCCCCCCC
Q psy11060 36 DYRL-IIRPLYSLCPCA------YSPCKHG-SCVDK----RAGYFCDCPPTYGGKNCSV----------ELTGCVGPDTC 93 (155)
Q Consensus 36 ~~~C-~C~~g~~~~~C~------~~~c~~~-~C~~~----~~~~~c~C~~g~~g~~c~~----------~~~~C~~~~~c 93 (155)
+..| .|.+||.+..|. ..+|... .|... .....|.|.++|.|..|+. ..+.|..- +|
T Consensus 417 G~~C~~C~~Gy~G~~c~~~~~C~~C~C~~~gtc~~~~~Cd~~tg~C~C~~g~~G~~Ce~C~~G~~g~~~~~~~C~~C-~C 495 (525)
T 4aqs_A 417 GERCDVCKEGFYDLSAEDPYGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCDQCLPQHWGLSNDLDGCRPC-DC 495 (525)
T ss_dssp TTTTCEECTTEECCCTTSTTSSEECCCCTTTBCCSSCCBCTTTCCBCBCTTCCSTTTCC---------------------
T ss_pred CCcccCCCCCCcCCCCCCCCCCccCCCCCCceecCCCcccCCCCEEECCCCCcCCCcccCCCCccCCCCCCCCCcCC-CC
Confidence 3445 677777654432 2334332 33221 2345799999999999862 23456555 67
Q ss_pred CCCCeeecCccCCCCCCeEeeCCCCCCCCCCCc
Q psy11060 94 LNGGTCKPYLVDETQHRFNCTCPSGYHGKICEK 126 (155)
Q Consensus 94 ~~~~~C~~~~~~~~~~~~~C~C~~g~~g~~C~~ 126 (155)
.+++.+...+ ...++.|.|++||+|..|+.
T Consensus 496 ~~~gs~~~~C---~~~tG~C~C~~G~~G~~Ceq 525 (525)
T 4aqs_A 496 DLGGALNNSC---SEDSGQCSCLPHMIGRQCNE 525 (525)
T ss_dssp ---------------------------------
T ss_pred CCCCccCCcc---CCCCCeeECCCCCcCCCCCC
Confidence 7766554111 12345799999999999973
No 77
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=97.22 E-value=0.00013 Score=39.92 Aligned_cols=34 Identities=26% Similarity=0.627 Sum_probs=27.9
Q ss_pred CCCCCCC-eeE--eCCCCeeeeCCCCCCCCCceecCC
Q psy11060 52 YSPCKHG-SCV--DKRAGYFCDCPPTYGGKNCSVELT 85 (155)
Q Consensus 52 ~~~c~~~-~C~--~~~~~~~c~C~~g~~g~~c~~~~~ 85 (155)
.+||.++ +|+ +..+.|.|.|+++|+|.+|+..+.
T Consensus 11 ~~pC~nGG~C~~~~~~~~~~C~C~~GytG~~Ce~~~~ 47 (53)
T 1nql_B 11 DGYCLHDGVCMYIEALDKYACNCVVGYIGERCQYRDL 47 (53)
T ss_dssp CCEECTTCEEEEETTTTEEEEEECTTEESTTSCEECS
T ss_pred CCCCCCCeEEeeecCCCCEEEecCCCCcCCCCCcCCc
Confidence 5789886 998 567789999999999999986543
No 78
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=97.08 E-value=0.00014 Score=40.60 Aligned_cols=36 Identities=28% Similarity=0.701 Sum_probs=26.8
Q ss_pred CCCCCCeeecCccCCCCCCeEeeCCCCCCCCCCCcCc
Q psy11060 92 TCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICEKIT 128 (155)
Q Consensus 92 ~c~~~~~C~~~~~~~~~~~~~C~C~~g~~g~~C~~~~ 128 (155)
+|.++++|..... .....+.|.|++||+|.+|+..+
T Consensus 15 pC~NGGtC~~~~~-~~~~~~~C~C~~Gf~G~~Ce~~~ 50 (58)
T 3ltf_D 15 YCLNDAHCFAVKI-ADLPVYSCECAIGFMGQRCEYKE 50 (58)
T ss_dssp TSCSSCEEEEEEE-TTEEEEEEEECTTEESSSSCEEC
T ss_pred cCCCCCEEeCCcc-CCCCCEEeECCCCCccCCCcccC
Confidence 7999999972100 12346899999999999998654
No 79
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.06 E-value=5.1e-05 Score=57.93 Aligned_cols=61 Identities=18% Similarity=0.287 Sum_probs=6.8
Q ss_pred cCCCCCCCCCCCCCCeeecCccCCCCCCeEeeCCCCCC----CCCCCcCcccc-cCCCceEeecCCCCCcce
Q psy11060 83 ELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYH----GKICEKITTMS-FSGGSHIMLNTTREEGYD 149 (155)
Q Consensus 83 ~~~~C~~~~~c~~~~~C~~~~~~~~~~~~~C~C~~g~~----g~~C~~~~~~~-~~~~~~~~~~~~~~~~~~ 149 (155)
++++|... ++.....|. +..++|.|.|++||+ |..|+++++|. .......|+|++..+.+.
T Consensus 2 ~~~~C~~~-~~~c~~~C~-----~~~g~~~C~C~~G~~l~~~~~~C~d~~eC~~~~~C~~~C~~~~g~~~C~ 67 (386)
T 3v65_B 2 GEENCNVN-NGGCAQKCQ-----MIRGAVQCTCHTGYRLTEDGRTCQDVNECAEEGYCSQGCTNSEGAFQCW 67 (386)
T ss_dssp --------------------------------------------------------CCTTEEC-----CCEE
T ss_pred CcCcccCC-CCCCCCCCc-----CCCCCcEeECCCCceECCCCCccCccceeCCcCcccCcCCCCCCCCeEE
Confidence 45678766 544444787 677889999999998 89999999996 334466788887665544
No 80
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=97.05 E-value=0.00071 Score=52.02 Aligned_cols=70 Identities=26% Similarity=0.583 Sum_probs=49.6
Q ss_pred ceecCCCCCCCCCCCCCCeeecCccCCCCCCeEeeCCC-CCCCCCCCcCcc-cccC-CCceEeecCCCC-----CcceEE
Q psy11060 80 CSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPS-GYHGKICEKITT-MSFS-GGSHIMLNTTRE-----EGYDIS 151 (155)
Q Consensus 80 c~~~~~~C~~~~~c~~~~~C~~~~~~~~~~~~~C~C~~-g~~g~~C~~~~~-~~~~-~~~~~~~~~~~~-----~~~~~~ 151 (155)
|....+.|... ||.+++.|. .....|.|.|+. +|.|..|+.... ..|. +.+++.+..+.. ...+++
T Consensus 181 C~~~~~~C~~~-pC~n~g~C~-----~~~~~~~C~C~~~~~~G~~C~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~i~ 254 (410)
T 3asi_A 181 CEGPSTTCQED-SCSNQGVCL-----QQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGGGQITYKWPPNDRPSTRADRLA 254 (410)
T ss_dssp CCCCSSCCCTT-SSSTTCEEE-----ECSSSEEEECTTTSEESTTSCEECCEEEEEEEEEEEEEECCTTCCCCBSEEEEE
T ss_pred CCCCCCCcccc-cCCCCCEec-----CCCCCceEeccCCcccCCCCCCCcccccccCCCceEEEecCCCCCccceeeEEE
Confidence 43334678877 999999999 667899999996 999999987543 3453 557777755432 223577
Q ss_pred EEeC
Q psy11060 152 FILH 155 (155)
Q Consensus 152 ~~~~ 155 (155)
|.||
T Consensus 255 l~fr 258 (410)
T 3asi_A 255 IGFS 258 (410)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7775
No 81
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=97.02 E-value=0.00079 Score=36.23 Aligned_cols=34 Identities=35% Similarity=0.852 Sum_probs=26.6
Q ss_pred CCCCCCCeeecCccCCCCCCeEeeCCCCCCCCCCCcCc
Q psy11060 91 DTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICEKIT 128 (155)
Q Consensus 91 ~~c~~~~~C~~~~~~~~~~~~~C~C~~g~~g~~C~~~~ 128 (155)
.+|.++ +|... .....+.|.|++||+|.+|+..+
T Consensus 14 ~yC~nG-~C~~~---~~~~~~~C~C~~gy~G~RCe~~d 47 (50)
T 3e50_C 14 QFCFHG-TCRFL---VQEDKPACVCHSGYVGARCEHAD 47 (50)
T ss_pred CcccCC-EEeec---cCCCCeEEECCCCCcccCCCcee
Confidence 379887 99732 24467899999999999998654
No 82
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=96.96 E-value=0.00091 Score=42.97 Aligned_cols=57 Identities=25% Similarity=0.809 Sum_probs=36.7
Q ss_pred CCCCC-eeEeCC--CCe-eeeCCCCCCCCCceecCC-CCCCCCCCCCCCeeecCccCCCCCCeEeeCCCCCCCCCCCc
Q psy11060 54 PCKHG-SCVDKR--AGY-FCDCPPTYGGKNCSVELT-GCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICEK 126 (155)
Q Consensus 54 ~c~~~-~C~~~~--~~~-~c~C~~g~~g~~c~~~~~-~C~~~~~c~~~~~C~~~~~~~~~~~~~C~C~~g~~g~~C~~ 126 (155)
||.++ +|++.. ..+ .|.|+++|.|..|+++++ +|... ....|.+.+..+++|..|+.
T Consensus 2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce~~~~~~C~~g----------------~G~~YrG~~~~t~sG~~Cq~ 63 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKSKTCYEG----------------NGHFYRGKASTDTMGRPCLP 63 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEEECCTTEESTTSCEESSCCSBCS----------------SCTTCCSCCCBBTTSCBBCC
T ss_pred CCCCcCCcCCCcccCCCCCccCCCCCCCccccccCcCCCccc----------------ccccceeeccccccCCcccC
Confidence 68886 898763 445 899999999999986653 33321 11245555666666666654
No 83
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=96.96 E-value=0.00041 Score=46.40 Aligned_cols=42 Identities=21% Similarity=0.605 Sum_probs=33.5
Q ss_pred cCCCCCCCCCCC-eeEeCCCCeeeeCCCCCCCCCceecCCCCCC
Q psy11060 47 LCPCAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCVG 89 (155)
Q Consensus 47 ~~~C~~~~c~~~-~C~~~~~~~~c~C~~g~~g~~c~~~~~~C~~ 89 (155)
.++|...||.++ +|++..+.|.|.|++||.|..|+.. ++|.+
T Consensus 119 ~~~c~~~~C~~~g~C~~~~~~~~c~C~~g~~G~~Ce~~-~~c~~ 161 (162)
T 1g1s_A 119 TASCQDMSCSKQGECLETIGNYTCSCYPGFYGPECEYV-RDDDD 161 (162)
T ss_dssp ECCCCTTGGGGSEEEEECSSSEEEEECTTEESTTSCEE-CC---
T ss_pred eCCCcCCCCCCCCEEecCCCCceEeCCCCCcCcccccC-cccCC
Confidence 456888899886 9999999999999999999999854 46753
No 84
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.89 E-value=0.00059 Score=56.08 Aligned_cols=60 Identities=20% Similarity=0.517 Sum_probs=43.7
Q ss_pred cCCCCCCC-CCCCCCCeeecCccCCCCCCeEeeCCCCCC---CCCCCcCcccccC-CCceEeecCCCCCcce
Q psy11060 83 ELTGCVGP-DTCLNGGTCKPYLVDETQHRFNCTCPSGYH---GKICEKITTMSFS-GGSHIMLNTTREEGYD 149 (155)
Q Consensus 83 ~~~~C~~~-~~c~~~~~C~~~~~~~~~~~~~C~C~~g~~---g~~C~~~~~~~~~-~~~~~~~~~~~~~~~~ 149 (155)
++++|... ..|. ..|. +..++|.|.|++||+ +..|+++++|... ..+..|+|++..+...
T Consensus 293 ~~~eC~~~~~~C~--~~C~-----~~~~~~~C~C~~G~~~~~~~~C~dideC~~~~~C~~~C~n~~g~y~C~ 357 (699)
T 1n7d_A 293 GTNECLDNNGGCS--HVCN-----DLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQ 357 (699)
T ss_dssp CCCCTTSSTTTSC--TTCC-----CCTTCCCCCCCSSSCCCSSSCCCCCCCCSSSSSCTTTCCBCSSCBCCC
T ss_pred ccccccccccCcC--CCcc-----cCCCCcEEeCCCCeEcCCCCcccCccccCCCCccccccccCCCCeeee
Confidence 34566544 2343 3677 788999999999999 8899999999733 4467888888766544
No 85
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=96.74 E-value=0.00064 Score=54.44 Aligned_cols=39 Identities=28% Similarity=0.755 Sum_probs=34.0
Q ss_pred CCCCCCCCCCCCCCeeecCccCC-CCCCeEeeCC-CCCCCCCCCcCc
Q psy11060 84 LTGCVGPDTCLNGGTCKPYLVDE-TQHRFNCTCP-SGYHGKICEKIT 128 (155)
Q Consensus 84 ~~~C~~~~~c~~~~~C~~~~~~~-~~~~~~C~C~-~g~~g~~C~~~~ 128 (155)
+++|.+. ||.++|.|. + ..++|.|.|+ +||+|..|+...
T Consensus 2 ~d~C~~~-PC~ngG~C~-----~~~~~~y~C~C~~~G~~G~~Ce~~~ 42 (553)
T 1q4g_A 2 VNPCCYY-PCQHQGICV-----RFGLDRYQCDCTRTGYSGPNCTIPE 42 (553)
T ss_dssp CCGGGGC-CCCTTCEEE-----EETTTEEEEECTTSSEETTTTCEEC
T ss_pred CCcCCCC-CCCCCCCcC-----CCCCCceEeeCCCCCcCCCCCCCCc
Confidence 4678888 999999998 6 6788999999 999999998744
No 86
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=96.70 E-value=0.00059 Score=37.45 Aligned_cols=40 Identities=30% Similarity=0.658 Sum_probs=30.4
Q ss_pred CCCCCC-CCCCCCCeeecCccCCCCCCeEeeCCCCCC----CCCCCcCcccc
Q psy11060 85 TGCVGP-DTCLNGGTCKPYLVDETQHRFNCTCPSGYH----GKICEKITTMS 131 (155)
Q Consensus 85 ~~C~~~-~~c~~~~~C~~~~~~~~~~~~~C~C~~g~~----g~~C~~~~~~~ 131 (155)
++|... ..|.. .|. ++.++|.|.|++||. +..|.+++++.
T Consensus 2 dEC~~~~~~C~~--~C~-----nt~Gsy~C~C~~Gy~L~~d~~~C~didec~ 46 (55)
T 2jkh_L 2 KLCSLDNGDCDQ--FCH-----EEQNSVVCSCARGYTLADNGKACIPTGPYP 46 (55)
T ss_dssp CCTTTGGGGCSS--EEE-----EETTEEEEECCTTEEECTTSSCEEESSSSC
T ss_pred ccccCCCCCcCc--EeE-----cCCCCeEEeCCCCCEECCCCCeeccCcccc
Confidence 355433 25653 798 889999999999997 67898888875
No 87
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=96.66 E-value=0.0022 Score=55.89 Aligned_cols=70 Identities=24% Similarity=0.587 Sum_probs=48.4
Q ss_pred ceecCCCCCCCCCCCCCCeeecCccCCCCCCeEeeCC-CCCCCCCCCcCcc-ccc-CCCceEeecCCCC-----CcceEE
Q psy11060 80 CSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCP-SGYHGKICEKITT-MSF-SGGSHIMLNTTRE-----EGYDIS 151 (155)
Q Consensus 80 c~~~~~~C~~~~~c~~~~~C~~~~~~~~~~~~~C~C~-~g~~g~~C~~~~~-~~~-~~~~~~~~~~~~~-----~~~~~~ 151 (155)
|....+.|... ||.+++.|. .....|.|.|+ ++|+|..|+.... +.| .+.+++.+..+.. ..-+|+
T Consensus 1013 C~~~~~~C~~~-pC~ngG~C~-----~~~~~~~C~C~~~g~~G~~C~~~~~~~~f~~~~~~v~y~~~~~~~~~~~~~~i~ 1086 (1245)
T 3qcw_A 1013 CEGPSTTCQED-SCSNQGVCL-----QQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGGGQITYKWPPNDRPSTRADRLA 1086 (1245)
T ss_dssp SSCCCCCCCTT-SSSSSCEEE-----EETTEEEEECTTSSCBSTTSCBCCCEEEEEEEEEEEEEECCTTCCCCBSEEEEE
T ss_pred eecccCceECC-cCCCCCEeC-----CCCCCCEEECCCCCCCCCCccCCCceEEEcCCCcEEEEecCCCCccccccceEE
Confidence 43334578887 999999998 56778999999 6999999987653 334 3446666654321 123577
Q ss_pred EEeC
Q psy11060 152 FILH 155 (155)
Q Consensus 152 ~~~~ 155 (155)
+.||
T Consensus 1087 l~Fr 1090 (1245)
T 3qcw_A 1087 IGFS 1090 (1245)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7775
No 88
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=96.59 E-value=0.00087 Score=53.68 Aligned_cols=37 Identities=43% Similarity=1.124 Sum_probs=33.3
Q ss_pred cCCCCCCCCCCC-eeEe-CCCCeeeeCC-CCCCCCCceec
Q psy11060 47 LCPCAYSPCKHG-SCVD-KRAGYFCDCP-PTYGGKNCSVE 83 (155)
Q Consensus 47 ~~~C~~~~c~~~-~C~~-~~~~~~c~C~-~g~~g~~c~~~ 83 (155)
+++|.++||.++ +|.+ ..+.|.|.|. +||.|..|+..
T Consensus 2 ~d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~~ 41 (553)
T 1q4g_A 2 VNPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTIP 41 (553)
T ss_dssp CCGGGGCCCCTTCEEEEETTTEEEEECTTSSEETTTTCEE
T ss_pred CCcCCCCCCCCCCCcCCCCCCceEeeCCCCCcCCCCCCCC
Confidence 478999999996 9999 8889999999 99999999864
No 89
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=96.58 E-value=0.0011 Score=35.74 Aligned_cols=33 Identities=30% Similarity=0.876 Sum_probs=25.9
Q ss_pred CCCCCCeeecCccCCCCCCeEeeCCCCCCCCCCCcCc
Q psy11060 92 TCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICEKIT 128 (155)
Q Consensus 92 ~c~~~~~C~~~~~~~~~~~~~C~C~~g~~g~~C~~~~ 128 (155)
.|.+ |.|... ...+.+.|.|++||+|.+|+..+
T Consensus 15 yC~n-G~C~~~---~~~~~~~C~C~~gy~G~RCe~~~ 47 (50)
T 1iox_A 15 YCIK-GRCRFV---VAEQTPSCVCDEGYIGARCERVD 47 (50)
T ss_dssp SCTT-CCEEEE---TTTTEEEECCCTTEETTTTCEEC
T ss_pred cccC-CEEEeE---cCCCCeEEECCCCcccCCCCeec
Confidence 7888 689532 34567899999999999998654
No 90
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=96.58 E-value=0.00084 Score=51.91 Aligned_cols=84 Identities=30% Similarity=0.526 Sum_probs=24.6
Q ss_pred eeEEcCCceEEEcCCCCccCCCCC-------CCCCCCee--EeCCCCeeee-CCCCCCCCCceecCCCCCCCCCCCCCCe
Q psy11060 29 NVIMLKSDYRLIIRPLYSLCPCAY-------SPCKHGSC--VDKRAGYFCD-CPPTYGGKNCSVELTGCVGPDTCLNGGT 98 (155)
Q Consensus 29 ~c~~~~~~~~C~C~~g~~~~~C~~-------~~c~~~~C--~~~~~~~~c~-C~~g~~g~~c~~~~~~C~~~~~c~~~~~ 98 (155)
.|....+.+.|.|..++.+..|.. .|+..+.+ +.......|. |.-.+.|..|... .. +|.+++.
T Consensus 305 ~C~~~~g~~~C~C~~~ttG~~CE~C~pgy~~~P~~~gt~~p~~~g~~~~C~pC~Cn~~g~~CD~~-----t~-~C~ngg~ 378 (426)
T 3zyj_B 305 VCVYDNSKLTCECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIPKGAANACIPSISSIGTNVCDNE-----LL-HCQNGGT 378 (426)
T ss_dssp CEEEETTEEEECCCTTEESSSSCEECTTCCSSCCCCCBCCSSSSCBCCCCCCCCC-------------------------
T ss_pred hcCCCCCCceeeCCCCCcCCCccccccccccCcccCCcccccCCCCCCcccCCCCCCCcCccccC-----cc-cCCCCCC
Confidence 366666778999999998877752 23433321 1112223443 3323345556422 23 7999999
Q ss_pred eecCccCCCCCCeEeeCCCCCCCCCCCc
Q psy11060 99 CKPYLVDETQHRFNCTCPSGYHGKICEK 126 (155)
Q Consensus 99 C~~~~~~~~~~~~~C~C~~g~~g~~C~~ 126 (155)
|. +.. .|.|++||+|..|+.
T Consensus 379 C~-----~~~---~C~C~~G~~G~~Ce~ 398 (426)
T 3zyj_B 379 CH-----NNV---RCLCPAAYTGILCEK 398 (426)
T ss_dssp ----------------------------
T ss_pred cC-----CCC---CCcCCCCCcCCCCcC
Confidence 98 322 899999999999974
No 91
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=96.54 E-value=0.0011 Score=53.39 Aligned_cols=39 Identities=26% Similarity=0.773 Sum_probs=32.4
Q ss_pred CCCCCCCCCCCCCCeeecCccCCCCCCeEeeCC-CCCCCCCCCcC
Q psy11060 84 LTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCP-SGYHGKICEKI 127 (155)
Q Consensus 84 ~~~C~~~~~c~~~~~C~~~~~~~~~~~~~C~C~-~g~~g~~C~~~ 127 (155)
+++|.+. ||.+++.|.. ...++|.|.|+ +||+|..|+..
T Consensus 1 vd~C~s~-PC~ngG~C~~----~~~~~y~C~C~~~G~~G~~Ce~~ 40 (587)
T 3nt1_A 1 ANPCCSN-PCQNRGECMS----TGFDQYKCDCTRTGFYGENCTTP 40 (587)
T ss_dssp CCTTTTC-CCCTTCEEEE----EETTEEEEECTTSSEETTTTCEE
T ss_pred CCCCCCC-CCCCCCEeeC----CCCCCeEEecCCCCccCCCCCCc
Confidence 3678888 9999999982 13468999999 99999999864
No 92
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=96.53 E-value=0.00023 Score=52.12 Aligned_cols=44 Identities=20% Similarity=0.575 Sum_probs=34.7
Q ss_pred cCCCCCCC-CCCCCCCeeecCccCCCCCCeEeeCCCCCC--CCCCCcCcccc
Q psy11060 83 ELTGCVGP-DTCLNGGTCKPYLVDETQHRFNCTCPSGYH--GKICEKITTMS 131 (155)
Q Consensus 83 ~~~~C~~~-~~c~~~~~C~~~~~~~~~~~~~C~C~~g~~--g~~C~~~~~~~ 131 (155)
++++|... ++|...+.|. |+.++|.|.|++||. |..|.+++++.
T Consensus 4 DiDEC~~~~~~C~~~a~C~-----Nt~Gsy~C~C~~Gy~GnG~~C~d~d~Pq 50 (285)
T 1gl4_A 4 AQQTCANNRHQCSVHAECR-----DYATGFCCRCVANYTGNGRQCVAEGSPQ 50 (285)
T ss_dssp ---CHHHHGGGSCTTEEEE-----ECSSCEEEEECTTEEECSSSEEETTCEE
T ss_pred cchhccCCCCCCCCCCEeE-----cCCCCeEEEcCCCCCCCCCcCCCCCCCc
Confidence 56788744 5899889999 899999999999999 78898877653
No 93
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.47 E-value=0.0011 Score=55.33 Aligned_cols=47 Identities=21% Similarity=0.539 Sum_probs=37.4
Q ss_pred eeecCccCCCCCCeEeeCCCCCC---CCCCCcCcccccC-CCceEeecCCCCCcce
Q psy11060 98 TCKPYLVDETQHRFNCTCPSGYH---GKICEKITTMSFS-GGSHIMLNTTREEGYD 149 (155)
Q Consensus 98 ~C~~~~~~~~~~~~~C~C~~g~~---g~~C~~~~~~~~~-~~~~~~~~~~~~~~~~ 149 (155)
.|. +..++|.|.|++||. |..|++++||... ..+..|+|++..+...
T Consensus 325 ~C~-----~~~~~y~C~C~~Gy~l~~g~~C~dideC~~~~~C~~~C~n~~gsy~C~ 375 (791)
T 3m0c_C 325 VCN-----DLKIGYECLCPDGFQLVAQRRCEDIDECQDPDTCSQLCVNLEGGYKCQ 375 (791)
T ss_dssp EEE-----ECSBSEEEECCTTCEEETTTEEECCCCCSSSSSCTTTCCBCSSCBCCC
T ss_pred ccc-----CCCCCcccCCCCCCccCCCCccccCcccCCCCCCCCeeecCCCCceee
Confidence 788 788999999999995 8899999999733 3466888887766544
No 94
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=96.44 E-value=0.0023 Score=34.51 Aligned_cols=23 Identities=26% Similarity=0.736 Sum_probs=19.7
Q ss_pred CCCCCCeeecCccCCCCCCeEeeCCCCCCC
Q psy11060 92 TCLNGGTCKPYLVDETQHRFNCTCPSGYHG 121 (155)
Q Consensus 92 ~c~~~~~C~~~~~~~~~~~~~C~C~~g~~g 121 (155)
+|. +.|. ++.++|.|.|++||++
T Consensus 21 ~C~--~~C~-----n~~Gsy~C~C~~Gy~~ 43 (53)
T 1apq_A 21 QCQ--HLCH-----NYVGGYFCSCRPGYEL 43 (53)
T ss_dssp TTS--SEEE-----EETTEEEEECSTTCEE
T ss_pred CCC--CEeE-----CCCCCeEEECCCCCeE
Confidence 676 3898 8899999999999974
No 95
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=96.43 E-value=0.0029 Score=36.57 Aligned_cols=33 Identities=12% Similarity=0.379 Sum_probs=25.4
Q ss_pred cCCCCCCC-CCCCCCCeeecCccCCCCCCeEee-CCCCCC
Q psy11060 83 ELTGCVGP-DTCLNGGTCKPYLVDETQHRFNCT-CPSGYH 120 (155)
Q Consensus 83 ~~~~C~~~-~~c~~~~~C~~~~~~~~~~~~~C~-C~~g~~ 120 (155)
++++|... ++|...+.|+ |+.++|.|. +..||.
T Consensus 2 DidEC~~~~~~C~~~~~C~-----Nt~Gsy~C~~~~~g~~ 36 (71)
T 2kl7_A 2 DVNECLTIPEACKGEMKCI-----NHYGGYLCLPRSAAVI 36 (71)
T ss_dssp CSCCTTCCCCSCTTEEEEE-----ETTCCEEEEETTSCCC
T ss_pred ccccccCCCCCCCCCCEeE-----CCCCCeEecccCCccc
Confidence 56788764 5798878999 899999997 445565
No 96
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=96.40 E-value=0.002 Score=43.08 Aligned_cols=40 Identities=28% Similarity=0.723 Sum_probs=31.7
Q ss_pred CCCCCCCCCCCCeeecCccCCCCCCeEeeCCCCCCCCCCCcCcccc
Q psy11060 86 GCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICEKITTMS 131 (155)
Q Consensus 86 ~C~~~~~c~~~~~C~~~~~~~~~~~~~C~C~~g~~g~~C~~~~~~~ 131 (155)
.|... +|...+.|. +....|.|.|.+||.|..|+++.+|.
T Consensus 121 ~~~~~-~C~~~g~C~-----~~~~~~~c~C~~g~~g~~C~~~~~c~ 160 (164)
T 3cfw_A 121 SCQPW-SCSGHGECV-----EIINNYTCNCDVGYYGPQCQFVQVDP 160 (164)
T ss_dssp CCCTT-SSCSSEEEE-----EETTEEEEEECTTCBSSSSCBC----
T ss_pred CCCCC-cCCCCCeec-----ccCCCceeeeCCCcccccccccccCc
Confidence 46666 899999999 67789999999999999999988874
No 97
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=96.40 E-value=0.0055 Score=32.87 Aligned_cols=38 Identities=29% Similarity=0.794 Sum_probs=27.4
Q ss_pred CCCCCC--CCCCCCCeeecCccCCCCCCeEeeCCCCCCCCCCCc
Q psy11060 85 TGCVGP--DTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICEK 126 (155)
Q Consensus 85 ~~C~~~--~~c~~~~~C~~~~~~~~~~~~~C~C~~g~~g~~C~~ 126 (155)
++|... ..|.++ +|... ...+.+.|.|++||+|++|+.
T Consensus 10 ~~C~~~~~~yC~nG-~C~~i---~~~~~~~C~C~~gy~G~RCe~ 49 (50)
T 2rnl_A 10 NPCNAEFQNFCIHG-ECKYI---EHLEAVTCKCQQEYFGERCGE 49 (50)
T ss_dssp CTTTTTGGGTCSSS-EEEEE---TTTTEEEEECCSSCCSSSCCC
T ss_pred cccCchhhCcCCCC-EEEEe---cCCCCeeEECCCCcccccccc
Confidence 345532 378875 89732 345678999999999999985
No 98
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=96.19 E-value=0.0029 Score=55.18 Aligned_cols=65 Identities=28% Similarity=0.754 Sum_probs=48.4
Q ss_pred CCCCCCCCCCCCCeeecCccCCCCCCeEeeCC-CCCCCCCCCcCc-ccccCCCceEeecCC---CCCcceEEEEeC
Q psy11060 85 TGCVGPDTCLNGGTCKPYLVDETQHRFNCTCP-SGYHGKICEKIT-TMSFSGGSHIMLNTT---REEGYDISFILH 155 (155)
Q Consensus 85 ~~C~~~~~c~~~~~C~~~~~~~~~~~~~C~C~-~g~~g~~C~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 155 (155)
+.|.+. ||.+++.|. .....|.|.|+ +||.|..|+... ..+|.+.+|+.+..+ .....+|++.||
T Consensus 620 ~~C~~~-pC~ngg~C~-----~~~~~~~C~C~~~g~~G~~C~~~~~~~~fdGs~~l~~~~~~~~~~~~~~isl~Fr 689 (1245)
T 3qcw_A 620 KPCLSN-PCKNNGMCR-----DGWNRYVCDCSGTGYLGRSCEREATVLSYDGSMFMKIQLPVVMHTEAEDVSLRFR 689 (1245)
T ss_dssp CGGGSC-CCCTTCEEE-----ECSSSEEEECTTTTEESTTSCEECCEEEEESSCCEEEEEEEEEEESEEEEEEEEE
T ss_pred CCCCcc-CCCCCCEEe-----CCCCCeEEECCCCCcccccCcccccccccCCCCceEEecccccccccceEEEEEE
Confidence 567777 999999999 67789999999 799999998643 346777777665443 233456777775
No 99
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=96.14 E-value=0.0027 Score=51.09 Aligned_cols=36 Identities=33% Similarity=0.940 Sum_probs=31.5
Q ss_pred cCCCCCCCCCCC-eeEe-CCCCeeeeCC-CCCCCCCcee
Q psy11060 47 LCPCAYSPCKHG-SCVD-KRAGYFCDCP-PTYGGKNCSV 82 (155)
Q Consensus 47 ~~~C~~~~c~~~-~C~~-~~~~~~c~C~-~g~~g~~c~~ 82 (155)
+++|.++||.++ +|++ ..+.|.|.|+ +||.|..|+.
T Consensus 1 vd~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~ 39 (587)
T 3nt1_A 1 ANPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTT 39 (587)
T ss_dssp CCTTTTCCCCTTCEEEEEETTEEEEECTTSSEETTTTCE
T ss_pred CCCCCCCCCCCCCEeeCCCCCCeEEecCCCCccCCCCCC
Confidence 478999999997 9995 4578999999 9999999985
No 100
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=96.04 E-value=0.0023 Score=36.82 Aligned_cols=42 Identities=24% Similarity=0.628 Sum_probs=31.6
Q ss_pred cCCCCCCC-CCCCCCCeeecCccCCCCC-CeEeeCCCCCC----CCCCCcCcccc
Q psy11060 83 ELTGCVGP-DTCLNGGTCKPYLVDETQH-RFNCTCPSGYH----GKICEKITTMS 131 (155)
Q Consensus 83 ~~~~C~~~-~~c~~~~~C~~~~~~~~~~-~~~C~C~~g~~----g~~C~~~~~~~ 131 (155)
++++|... ..|.. .|. ++.+ +|.|.|++||. +..|.+++++.
T Consensus 4 d~~eC~~~nggC~h--~C~-----n~~g~s~~C~C~~Gy~L~~D~~tC~d~dec~ 51 (69)
T 1kli_L 4 DQLICVNENGGCEQ--YCS-----DHTGTKRSCRCHEGYSLLADGVSCTPTVEYP 51 (69)
T ss_dssp CCCCTTSGGGGCSS--EEE-----EETTTEEEEECCTTEEECTTSSCEEECSSSC
T ss_pred ccccccCCCCCcCC--EeE-----cCCCCCEEEeCCCCCeECCCCCcccCccccc
Confidence 56777654 24543 687 6777 79999999997 78898888875
No 101
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=95.92 E-value=0.004 Score=43.93 Aligned_cols=60 Identities=30% Similarity=0.621 Sum_probs=44.1
Q ss_pred CCCC-CeeEeCCCCeeeeCCCCCCCCCceecCC---------CCCC---CCCCCCCCeeecCccCCCCCCeEeeCCCC--
Q psy11060 54 PCKH-GSCVDKRAGYFCDCPPTYGGKNCSVELT---------GCVG---PDTCLNGGTCKPYLVDETQHRFNCTCPSG-- 118 (155)
Q Consensus 54 ~c~~-~~C~~~~~~~~c~C~~g~~g~~c~~~~~---------~C~~---~~~c~~~~~C~~~~~~~~~~~~~C~C~~g-- 118 (155)
.|.+ |.|+. ..|.|.++|.|..|+.+.. .|.. ..+|.+++.|. ...|.|.+|
T Consensus 97 ~Csg~G~C~~----g~C~C~~G~~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~---------~g~C~C~~gw~ 163 (217)
T 2p28_B 97 LCHGKGFLEC----GICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCV---------CGQCLCHTSDV 163 (217)
T ss_dssp TTTTSEEEET----TEEEECTTEESTTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEE---------TTEEEECCCCS
T ss_pred ccCCCceEEC----CEEECCCCccCCcccccCcccccccCCCcCCCCCCCCCCCCCCEEe---------CCceECCCCCC
Confidence 4665 37864 3899999999999975432 2432 12688888997 247999999
Q ss_pred ----CCCCCCCc
Q psy11060 119 ----YHGKICEK 126 (155)
Q Consensus 119 ----~~g~~C~~ 126 (155)
|+|..|+.
T Consensus 164 ~~~~~~G~~Ce~ 175 (217)
T 2p28_B 164 PGKLIYGQYCEC 175 (217)
T ss_dssp TTCCEESTTSCE
T ss_pred CcccEECCCccc
Confidence 58999984
No 102
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=95.92 E-value=0.003 Score=37.22 Aligned_cols=37 Identities=32% Similarity=0.856 Sum_probs=26.9
Q ss_pred CCCC---CCCCCCCCCeeecCccCCCCCCeEeeCCCCCCCCCCCc
Q psy11060 85 TGCV---GPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICEK 126 (155)
Q Consensus 85 ~~C~---~~~~c~~~~~C~~~~~~~~~~~~~C~C~~g~~g~~C~~ 126 (155)
++|. .. +|.++ .|... ...+.+.|.|++||+|.+|+.
T Consensus 38 ~pC~~~~~~-yClnG-~C~~i---~~~~~~~C~C~~GYtG~RCE~ 77 (79)
T 1xdt_R 38 DPCLRKYKD-FCIHG-ECKYV---KELRAPSCICHPGYHGERCHG 77 (79)
T ss_dssp -CTTTTTTT-CCSSE-EECCB---GGGTBCCEEECTTEESTTCCE
T ss_pred CCCCccccC-cCCCC-Eeeee---cCCCCeEEEcCCCcccccccc
Confidence 4565 34 89986 89532 233568999999999999975
No 103
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=95.61 E-value=0.0032 Score=34.90 Aligned_cols=30 Identities=23% Similarity=0.710 Sum_probs=24.3
Q ss_pred CCCCC-eeE--e--CCCCeeeeCCCCCCCCCceec
Q psy11060 54 PCKHG-SCV--D--KRAGYFCDCPPTYGGKNCSVE 83 (155)
Q Consensus 54 ~c~~~-~C~--~--~~~~~~c~C~~g~~g~~c~~~ 83 (155)
||.++ +|. . ....+.|.|++||.|.+|+..
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce~~ 49 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEYK 49 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEESSSSCEE
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCccCCCccc
Confidence 88886 997 3 445689999999999999753
No 104
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=95.53 E-value=0.013 Score=40.22 Aligned_cols=33 Identities=48% Similarity=1.174 Sum_probs=27.2
Q ss_pred CCCCCCCCCCCCCeeecCccCCCCCCeEeeCCCCCCCCCCCcC
Q psy11060 85 TGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICEKI 127 (155)
Q Consensus 85 ~~C~~~~~c~~~~~C~~~~~~~~~~~~~C~C~~g~~g~~C~~~ 127 (155)
..|.. +|.++|.|. ....|.|++||+|..|+..
T Consensus 149 ~~C~~--~C~ngG~Cv--------~P~~C~C~~Gw~G~~C~~~ 181 (188)
T 2ygo_A 149 AECPG--GCRNGGFCN--------ERRICECPDGFHGPHCEGT 181 (188)
T ss_dssp CCCTT--CCCTTCEEC--------TTSCEECCTTCBTTTTCBC
T ss_pred CccCC--CCCCCCEeC--------CCCcccCcCCCCCCCCcCC
Confidence 45763 699999998 2568999999999999864
No 105
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=95.42 E-value=0.0093 Score=38.15 Aligned_cols=32 Identities=41% Similarity=0.973 Sum_probs=25.9
Q ss_pred CCCCCCeeecCccCCCC--CCe-EeeCCCCCCCCCCCcCc
Q psy11060 92 TCLNGGTCKPYLVDETQ--HRF-NCTCPSGYHGKICEKIT 128 (155)
Q Consensus 92 ~c~~~~~C~~~~~~~~~--~~~-~C~C~~g~~g~~C~~~~ 128 (155)
||.++++|. +.. ..+ .|.|+++|+|..|+...
T Consensus 2 pC~nggtC~-----~~~~~~~~~~C~Cp~g~~G~~Ce~~~ 36 (122)
T 2fd6_A 2 DCLNGGTCV-----SNKYFSNIHWCNCPKKFGGQHCEIDK 36 (122)
T ss_dssp CCCSSCEEE-----ECTTTTTCEEEECCTTEESTTSCEES
T ss_pred CCCCcCCcC-----CCcccCCCCCccCCCCCCCccccccC
Confidence 799999997 432 455 99999999999998753
No 106
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=95.32 E-value=0.016 Score=31.57 Aligned_cols=17 Identities=24% Similarity=0.800 Sum_probs=11.0
Q ss_pred eeEeCCCCeeeeCCCCC
Q psy11060 59 SCVDKRAGYFCDCPPTY 75 (155)
Q Consensus 59 ~C~~~~~~~~c~C~~g~ 75 (155)
.|++.+++|.|.|++||
T Consensus 14 ~C~nt~Gsy~C~C~~Gy 30 (55)
T 2jkh_L 14 FCHEEQNSVVCSCARGY 30 (55)
T ss_dssp EEEEETTEEEEECCTTE
T ss_pred EeEcCCCCeEEeCCCCC
Confidence 56666666666666666
No 107
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=95.30 E-value=0.0041 Score=41.14 Aligned_cols=37 Identities=35% Similarity=0.971 Sum_probs=31.5
Q ss_pred CCCCCCCCCCCCCeeecCccCCCCCCeEeeCCCCCCCCCCCcC
Q psy11060 85 TGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICEKI 127 (155)
Q Consensus 85 ~~C~~~~~c~~~~~C~~~~~~~~~~~~~C~C~~g~~g~~C~~~ 127 (155)
..|... +|.+.+.|. +....|.|.|.+||+|..|+.+
T Consensus 120 ~~~~~~-pc~~~g~C~-----~~~~~~~c~C~~g~~g~~Ce~~ 156 (157)
T 1g1t_A 120 AACTNT-SCSGHGECV-----ETINNYTCKCDPGFSGLKCEQI 156 (157)
T ss_dssp CCCCTT-GGGGSEEEE-----EETTEEEEEECTTEESTTSCEE
T ss_pred CCCCCC-CCCCCCEee-----cCCCCeeEECCCCccCcccccc
Confidence 456666 899889998 6788999999999999999864
No 108
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=95.10 E-value=0.02 Score=30.57 Aligned_cols=23 Identities=43% Similarity=1.197 Sum_probs=18.1
Q ss_pred CCCCCCeeEeCCCCeeeeCCCCCC
Q psy11060 53 SPCKHGSCVDKRAGYFCDCPPTYG 76 (155)
Q Consensus 53 ~~c~~~~C~~~~~~~~c~C~~g~~ 76 (155)
.+|.+ .|++..++|.|.|++||.
T Consensus 20 ~~C~~-~C~n~~Gsy~C~C~~Gy~ 42 (53)
T 1apq_A 20 PQCQH-LCHNYVGGYFCSCRPGYE 42 (53)
T ss_dssp CTTSS-EEEEETTEEEEECSTTCE
T ss_pred CCCCC-EeECCCCCeEEECCCCCe
Confidence 45654 888888889999988885
No 109
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=94.85 E-value=0.0052 Score=48.14 Aligned_cols=43 Identities=28% Similarity=0.564 Sum_probs=13.1
Q ss_pred eEEEcCCCCccCCCCC----CCCCCC-eeEeCCCCeeeeCCCCCCCCCcee
Q psy11060 37 YRLIIRPLYSLCPCAY----SPCKHG-SCVDKRAGYFCDCPPTYGGKNCSV 82 (155)
Q Consensus 37 ~~C~C~~g~~~~~C~~----~~c~~~-~C~~~~~~~~c~C~~g~~g~~c~~ 82 (155)
+.|.|.+||.+..|.. .+|.++ +|+.. +.|.|.++|.|..|+.
T Consensus 408 ~~C~C~~G~~G~~C~~~~C~~~C~~~g~C~~~---~~C~C~~G~~G~~C~~ 455 (463)
T 2wg3_C 408 GKCCCSPGWEGDFCRTAKCEPACRHGGVCVRP---NKCLCKKGYLGPQCEQ 455 (463)
T ss_dssp SCEEECTTEESTTSCEECC--------------------------------
T ss_pred CeECCCCCcCCCcCCcCcCCCCCCCCCEECCC---CEEECCCCcccCCCCC
Confidence 5899999999777752 267775 88754 6999999999999974
No 110
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=94.84 E-value=0.012 Score=38.74 Aligned_cols=37 Identities=27% Similarity=0.808 Sum_probs=31.6
Q ss_pred cCCCCCCCCCCC-eeEeCCCCeeeeCCCCCCCCCceec
Q psy11060 47 LCPCAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVE 83 (155)
Q Consensus 47 ~~~C~~~~c~~~-~C~~~~~~~~c~C~~g~~g~~c~~~ 83 (155)
.+.|...||.++ .|.+....|.|.|.++|.|..|+.+
T Consensus 119 ~~~~~~~pc~~~g~C~~~~~~~~c~C~~g~~g~~Ce~~ 156 (157)
T 1g1t_A 119 TAACTNTSCSGHGECVETINNYTCKCDPGFSGLKCEQI 156 (157)
T ss_dssp ECCCCTTGGGGSEEEEEETTEEEEEECTTEESTTSCEE
T ss_pred cCCCCCCCCCCCCEeecCCCCeeEECCCCccCcccccc
Confidence 456777888875 9999999999999999999999754
No 111
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=94.76 E-value=0.022 Score=38.20 Aligned_cols=17 Identities=24% Similarity=0.614 Sum_probs=11.7
Q ss_pred CeEe-eCCCCCCCCCCCc
Q psy11060 110 RFNC-TCPSGYHGKICEK 126 (155)
Q Consensus 110 ~~~C-~C~~g~~g~~C~~ 126 (155)
+..| .|.++|+|.+|+.
T Consensus 74 tG~C~~C~~g~~G~~Ce~ 91 (162)
T 1klo_A 74 TGECLKCIYNTAGFYCDR 91 (162)
T ss_dssp TCCBCCBCTTEETTTTCE
T ss_pred CCcccCCCCCCcCCCcCc
Confidence 4567 3778887777764
No 112
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=94.75 E-value=0.0072 Score=32.46 Aligned_cols=29 Identities=28% Similarity=0.772 Sum_probs=24.2
Q ss_pred eeecCccCCCCCCeEeeCCCCCC----CCCCCcCcccc
Q psy11060 98 TCKPYLVDETQHRFNCTCPSGYH----GKICEKITTMS 131 (155)
Q Consensus 98 ~C~~~~~~~~~~~~~C~C~~g~~----g~~C~~~~~~~ 131 (155)
.|. ++.++|.|.|++||. +..|.+++++.
T Consensus 11 ~C~-----n~~gs~~C~C~~Gy~L~~d~~tC~dide~p 43 (51)
T 1kig_L 11 FCR-----EERSEVRCSCAHGYVLGDDSKSCVSTERFP 43 (51)
T ss_dssp CCC-----EETTEECCCCCTTEEECTTSSCEEECSSSC
T ss_pred EeE-----cCCCCeEEeCCCCcEECCCCCccccCCccc
Confidence 577 778999999999997 77888888764
No 113
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=94.67 E-value=0.032 Score=37.06 Aligned_cols=40 Identities=25% Similarity=0.562 Sum_probs=30.0
Q ss_pred CCCCCCCCCCC-eeEeCCCCeeeeCCCCCCCCCceecCCCCC
Q psy11060 48 CPCAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSVELTGCV 88 (155)
Q Consensus 48 ~~C~~~~c~~~-~C~~~~~~~~c~C~~g~~g~~c~~~~~~C~ 88 (155)
..|...+|... .|++....+.|.|.+||.|..|+ .+.+|.
T Consensus 120 ~~~~~~~C~~~g~C~~~~~~~~c~C~~g~~g~~C~-~~~~c~ 160 (164)
T 3cfw_A 120 ASCQPWSCSGHGECVEIINNYTCNCDVGYYGPQCQ-FVQVDP 160 (164)
T ss_dssp CCCCTTSSCSSEEEEEETTEEEEEECTTCBSSSSC-BC----
T ss_pred CCCCCCcCCCCCeecccCCCceeeeCCCccccccc-ccccCc
Confidence 44666788864 99998889999999999999997 445564
No 114
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=94.57 E-value=0.013 Score=31.76 Aligned_cols=29 Identities=24% Similarity=0.697 Sum_probs=24.3
Q ss_pred eeecCccCCCCC-CeEeeCCCCCC----CCCCCcCcccc
Q psy11060 98 TCKPYLVDETQH-RFNCTCPSGYH----GKICEKITTMS 131 (155)
Q Consensus 98 ~C~~~~~~~~~~-~~~C~C~~g~~----g~~C~~~~~~~ 131 (155)
.|. ++.+ +|.|.|++||. +..|.+++++.
T Consensus 12 ~C~-----n~~ggs~~C~C~~Gy~L~~Dg~tC~d~dec~ 45 (53)
T 2bz6_L 12 YCS-----DHTGTKRSCRCHEGYSLLADGVSCTPTVEYP 45 (53)
T ss_dssp EEE-----EETTTEEEEECCTTEEECTTSSCEEECSSSC
T ss_pred EeE-----cCCCCCEEeeCCCCCEECCCCCcccCCcccc
Confidence 687 6777 79999999997 78898888875
No 115
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=94.05 E-value=0.012 Score=34.61 Aligned_cols=36 Identities=33% Similarity=0.738 Sum_probs=25.7
Q ss_pred cCCCC---CCCCCCCeeE--eCCCCeeeeCCCCCCCCCcee
Q psy11060 47 LCPCA---YSPCKHGSCV--DKRAGYFCDCPPTYGGKNCSV 82 (155)
Q Consensus 47 ~~~C~---~~~c~~~~C~--~~~~~~~c~C~~g~~g~~c~~ 82 (155)
.++|. .+.|.||.|. .....+.|.|.++|+|.+|+.
T Consensus 37 ~~pC~~~~~~yClnG~C~~i~~~~~~~C~C~~GYtG~RCE~ 77 (79)
T 1xdt_R 37 RDPCLRKYKDFCIHGECKYVKELRAPSCICHPGYHGERCHG 77 (79)
T ss_dssp --CTTTTTTTCCSSEEECCBGGGTBCCEEECTTEESTTCCE
T ss_pred CCCCCccccCcCCCCEeeeecCCCCeEEEcCCCcccccccc
Confidence 35665 5678888884 233567899999999999974
No 116
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=93.98 E-value=0.012 Score=39.48 Aligned_cols=46 Identities=20% Similarity=0.602 Sum_probs=31.9
Q ss_pred CCCCCCCceecCCCCCCC-CC---CCCCCeeecCccCCCCCCeEeeCCCCCC----CCCCC
Q psy11060 73 PTYGGKNCSVELTGCVGP-DT---CLNGGTCKPYLVDETQHRFNCTCPSGYH----GKICE 125 (155)
Q Consensus 73 ~g~~g~~c~~~~~~C~~~-~~---c~~~~~C~~~~~~~~~~~~~C~C~~g~~----g~~C~ 125 (155)
.||.+..+..++++|... .. |.+ .|. +..++|.|.|++||+ +..|.
T Consensus 113 ~Gf~~~~~~~di~eC~~~~~~~~~C~~--~C~-----n~~g~~~C~C~~Gy~l~~d~~~C~ 166 (170)
T 1szb_A 113 TGFEAFYAAEDIDECQVAPGEAPTCDH--HCH-----NHLGGFYCSCRAGYVLHRNKRTCS 166 (170)
T ss_dssp CEEEEEEEEEECCTTCCCTTSCCSSSS--EEE-----EETTEEEEECCTTEEECTTSSCEE
T ss_pred cCceeeeeccccCcccCCCCCCCccCC--ccc-----cCCCCEEEeCCCCcEECCCCCccc
Confidence 444444444567888765 11 765 688 788999999999997 45554
No 117
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=93.94 E-value=0.053 Score=28.96 Aligned_cols=29 Identities=31% Similarity=0.839 Sum_probs=22.0
Q ss_pred CCCCCCeeE--eCCCCeeeeCCCCCCCCCce
Q psy11060 53 SPCKHGSCV--DKRAGYFCDCPPTYGGKNCS 81 (155)
Q Consensus 53 ~~c~~~~C~--~~~~~~~c~C~~g~~g~~c~ 81 (155)
..|.+|+|. ...+.+.|.|+.+|.|.+|+
T Consensus 18 ~yC~nG~C~~i~~~~~~~C~C~~gy~G~RCe 48 (50)
T 2rnl_A 18 NFCIHGECKYIEHLEAVTCKCQQEYFGERCG 48 (50)
T ss_dssp GTCSSSEEEEETTTTEEEEECCSSCCSSSCC
T ss_pred CcCCCCEEEEecCCCCeeEECCCCccccccc
Confidence 457777776 34556789999999999886
No 118
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=93.86 E-value=0.065 Score=35.29 Aligned_cols=35 Identities=31% Similarity=1.093 Sum_probs=26.4
Q ss_pred CCCCC-eeEeC--CCCe-eeeCCCCCCCCCceecCC-CCC
Q psy11060 54 PCKHG-SCVDK--RAGY-FCDCPPTYGGKNCSVELT-GCV 88 (155)
Q Consensus 54 ~c~~~-~C~~~--~~~~-~c~C~~g~~g~~c~~~~~-~C~ 88 (155)
||.|| +|+.. ...+ .|.|+++|.|..|++++. +|.
T Consensus 14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei~~~~~C~ 53 (145)
T 2i9a_A 14 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKSKTCY 53 (145)
T ss_dssp CCCTTCEEEECSSSTTCEEEECCTTEESTTSCEESSCCEE
T ss_pred CCCCCCCcCCCccccCCccccCCCCCCCCceeccccccCC
Confidence 78886 99765 2445 899999999999987653 344
No 119
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=93.35 E-value=0.088 Score=28.06 Aligned_cols=29 Identities=31% Similarity=0.687 Sum_probs=22.3
Q ss_pred CCCCCCeeEe--CCCCeeeeCCCCCCCCCce
Q psy11060 53 SPCKHGSCVD--KRAGYFCDCPPTYGGKNCS 81 (155)
Q Consensus 53 ~~c~~~~C~~--~~~~~~c~C~~g~~g~~c~ 81 (155)
..|.+|+|.- ....+.|.|+++|.|.+|+
T Consensus 14 ~yC~nG~C~~~~~~~~~~C~C~~gy~G~RCe 44 (50)
T 3e50_C 14 QFCFHGTCRFLVQEDKPACVCHSGYVGARCE 44 (50)
T ss_pred CcccCCEEeeccCCCCeEEECCCCCcccCCC
Confidence 4577777763 3466899999999999986
No 120
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=93.29 E-value=0.079 Score=30.24 Aligned_cols=17 Identities=29% Similarity=0.712 Sum_probs=10.0
Q ss_pred eeEeCCC-CeeeeCCCCC
Q psy11060 59 SCVDKRA-GYFCDCPPTY 75 (155)
Q Consensus 59 ~C~~~~~-~~~c~C~~g~ 75 (155)
.|++..+ +|.|.|++||
T Consensus 18 ~C~n~~g~s~~C~C~~Gy 35 (69)
T 1kli_L 18 YCSDHTGTKRSCRCHEGY 35 (69)
T ss_dssp EEEEETTTEEEEECCTTE
T ss_pred EeEcCCCCCEEEeCCCCC
Confidence 5555555 4666666665
No 121
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=92.97 E-value=0.077 Score=40.58 Aligned_cols=37 Identities=24% Similarity=0.767 Sum_probs=32.1
Q ss_pred cCCCCCCCCCCC-eeEeCCCCeeeeCCC-CCCCCCceec
Q psy11060 47 LCPCAYSPCKHG-SCVDKRAGYFCDCPP-TYGGKNCSVE 83 (155)
Q Consensus 47 ~~~C~~~~c~~~-~C~~~~~~~~c~C~~-g~~g~~c~~~ 83 (155)
.+.|...||.++ .|++....|.|.|+. +|.|+.|+.+
T Consensus 185 ~~~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~G~~C~~~ 223 (410)
T 3asi_A 185 STTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDP 223 (410)
T ss_dssp SSCCCTTSSSTTCEEEECSSSEEEECTTTSEESTTSCEE
T ss_pred CCCcccccCCCCCEecCCCCCceEeccCCcccCCCCCCC
Confidence 467888999996 999999999999996 9999999753
No 122
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=92.94 E-value=0.065 Score=35.27 Aligned_cols=33 Identities=39% Similarity=0.877 Sum_probs=25.2
Q ss_pred CCCCCCeeecCccCCCCCCe-EeeCCCCCCCCCCCcC
Q psy11060 92 TCLNGGTCKPYLVDETQHRF-NCTCPSGYHGKICEKI 127 (155)
Q Consensus 92 ~c~~~~~C~~~~~~~~~~~~-~C~C~~g~~g~~C~~~ 127 (155)
+|++++.|... .....+ .|.|++||.|..|+..
T Consensus 14 pC~NGGtC~~~---~~~s~~~~C~Cp~g~~G~~Cei~ 47 (145)
T 2i9a_A 14 DCLNGGTCVSN---KYFSNIHWCNCPKKFGGQHCEID 47 (145)
T ss_dssp CCCTTCEEEEC---SSSTTCEEEECCTTEESTTSCEE
T ss_pred CCCCCCCcCCC---ccccCCccccCCCCCCCCceecc
Confidence 79999999721 012345 8999999999999865
No 123
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=92.66 E-value=0.056 Score=28.84 Aligned_cols=31 Identities=26% Similarity=0.516 Sum_probs=23.5
Q ss_pred CCCCCCeeE--eCCCCeeeeCCCCCCCCCceec
Q psy11060 53 SPCKHGSCV--DKRAGYFCDCPPTYGGKNCSVE 83 (155)
Q Consensus 53 ~~c~~~~C~--~~~~~~~c~C~~g~~g~~c~~~ 83 (155)
..|.+|+|. ...+.+.|.|+++|.|.+|+..
T Consensus 14 ~yC~nG~C~~~~~~~~~~C~C~~gy~G~RCe~~ 46 (50)
T 1iox_A 14 HYCIKGRCRFVVAEQTPSCVCDEGYIGARCERV 46 (50)
T ss_dssp TSCTTCCEEEETTTTEEEECCCTTEETTTTCEE
T ss_pred CcccCCEEEeEcCCCCeEEECCCCcccCCCCee
Confidence 557777775 3455679999999999999753
No 124
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=91.89 E-value=0.31 Score=29.78 Aligned_cols=58 Identities=19% Similarity=0.524 Sum_probs=38.2
Q ss_pred eeEeC-CCCeeeeCCCCCC--CCCceecC-CCCCCC-CCCCCCCeeecCccCCCC----CCeEeeCCCCCC
Q psy11060 59 SCVDK-RAGYFCDCPPTYG--GKNCSVEL-TGCVGP-DTCLNGGTCKPYLVDETQ----HRFNCTCPSGYH 120 (155)
Q Consensus 59 ~C~~~-~~~~~c~C~~g~~--g~~c~~~~-~~C~~~-~~c~~~~~C~~~~~~~~~----~~~~C~C~~g~~ 120 (155)
.|... .+...|+|.++|. |..|.... ..|... --|...+.|... .+ +...|.|.+++.
T Consensus 17 ~C~r~~~g~e~C~C~~gy~gdg~~Cv~~~~~sC~~nNGGCd~nA~C~~~----~~~~~~~ki~C~C~~g~~ 83 (99)
T 1ob1_C 17 GCFRHLDEREECKCLLNYKQEGDKCVENPNPTCNENNGGCDADAKCTEE----DSGSNGKKITCECTKPDS 83 (99)
T ss_dssp EEECCTTSCCEEEECTTEEEETTEEEECSCCCSTTGGGGCCTTEEEECC----SCSSSSCCCEEEECSTTC
T ss_pred CeEEcCCCCEEEEecCCeecCCCeEeeCCCCChhhcCCCcCCCceeEec----CCcccCCceEeEeCCCCc
Confidence 66653 5667888888885 44565332 467654 258888899842 22 567899999976
No 125
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=91.64 E-value=0.059 Score=39.43 Aligned_cols=30 Identities=3% Similarity=-0.062 Sum_probs=22.2
Q ss_pred CCceecCCCc---ceeEEcCCceEEEcCCCCcc
Q psy11060 18 KQFSIGTNSV---LNVIMLKSDYRLIIRPLYSL 47 (155)
Q Consensus 18 ~~~~~~~~~~---~~c~~~~~~~~C~C~~g~~~ 47 (155)
..|..+.+.| ..|.|..++|.|.|..||.+
T Consensus 6 DEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~G 38 (285)
T 1gl4_A 6 QTCANNRHQCSVHAECRDYATGFCCRCVANYTG 38 (285)
T ss_dssp -CHHHHGGGSCTTEEEEECSSCEEEEECTTEEE
T ss_pred hhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCC
Confidence 4565554445 56999999999999999984
No 126
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=91.61 E-value=1 Score=27.76 Aligned_cols=71 Identities=17% Similarity=0.461 Sum_probs=47.1
Q ss_pred CCCCCCCCC-eeEe-CCCCeeeeCCCCCC--CCCceecCCC-CCCC-CCCCCCCeeecCccCCCCCCeEeeCCCCCC---
Q psy11060 50 CAYSPCKHG-SCVD-KRAGYFCDCPPTYG--GKNCSVELTG-CVGP-DTCLNGGTCKPYLVDETQHRFNCTCPSGYH--- 120 (155)
Q Consensus 50 C~~~~c~~~-~C~~-~~~~~~c~C~~g~~--g~~c~~~~~~-C~~~-~~c~~~~~C~~~~~~~~~~~~~C~C~~g~~--- 120 (155)
|...-|+.. .|.. ..+...|.|..+|. |..|... +. |... --|...+.|.. ..+....|.|.++|.
T Consensus 13 C~~t~Cp~NA~C~r~~~G~e~CrCl~gY~~dg~~Cv~~-Np~C~~nNGGCd~nAeC~~----~~~~ki~C~C~~~~~~~~ 87 (105)
T 1n1i_A 13 CIDTNVPENAACYRYLDGTEEWRCLLGFKEVGGKCVPA-SITCEENNGGCAPEAECTM----DDKKEVECKCTKEGSEPL 87 (105)
T ss_dssp CCSSCCCTTEEEEECTTSCEEEEECTTEEECSSSEEEC-CCCTTSGGGGSCTTSEEEE----CTTSCEEEECCSTTCCEE
T ss_pred ecCCCCCCCCCeEECCCCCEeEEEECCeeccCCEEEEC-CcchhhcCCCcCCCcEeEE----CCCCEEEeECCCCCCccc
Confidence 444444433 7776 46777899999995 5667644 55 6544 25888899983 223678899999865
Q ss_pred --CCCCC
Q psy11060 121 --GKICE 125 (155)
Q Consensus 121 --g~~C~ 125 (155)
|.+|.
T Consensus 88 ~~GvfC~ 94 (105)
T 1n1i_A 88 FEGVFCS 94 (105)
T ss_dssp GGGTEEC
T ss_pred cceEEEC
Confidence 55554
No 127
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=91.49 E-value=0.17 Score=27.17 Aligned_cols=17 Identities=29% Similarity=0.712 Sum_probs=9.1
Q ss_pred eeEeCCC-CeeeeCCCCC
Q psy11060 59 SCVDKRA-GYFCDCPPTY 75 (155)
Q Consensus 59 ~C~~~~~-~~~c~C~~g~ 75 (155)
.|++..+ +|.|.|++||
T Consensus 12 ~C~n~~ggs~~C~C~~Gy 29 (53)
T 2bz6_L 12 YCSDHTGTKRSCRCHEGY 29 (53)
T ss_dssp EEEEETTTEEEEECCTTE
T ss_pred EeEcCCCCCEEeeCCCCC
Confidence 4555544 3555555555
No 128
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=91.35 E-value=0.21 Score=28.57 Aligned_cols=12 Identities=17% Similarity=0.169 Sum_probs=6.9
Q ss_pred eeEEcCCceEEE
Q psy11060 29 NVIMLKSDYRLI 40 (155)
Q Consensus 29 ~c~~~~~~~~C~ 40 (155)
.|+|..++|.|.
T Consensus 18 ~C~Nt~Gsy~C~ 29 (71)
T 2kl7_A 18 KCINHYGGYLCL 29 (71)
T ss_dssp EEEETTCCEEEE
T ss_pred EeECCCCCeEec
Confidence 455666666664
No 129
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=90.29 E-value=0.15 Score=28.06 Aligned_cols=37 Identities=24% Similarity=0.666 Sum_probs=25.1
Q ss_pred eeecCccCCCC-CCeEeeCCCCCC----CCCCCcCcccccCCCceEeecC
Q psy11060 98 TCKPYLVDETQ-HRFNCTCPSGYH----GKICEKITTMSFSGGSHIMLNT 142 (155)
Q Consensus 98 ~C~~~~~~~~~-~~~~C~C~~g~~----g~~C~~~~~~~~~~~~~~~~~~ 142 (155)
.|. +.. ++|.|.|++||. +..|.++++. ..+.+++|.
T Consensus 12 ~C~-----n~~~gs~~C~C~~Gy~L~~D~~tC~d~~~~---pC~~~c~n~ 53 (59)
T 2wph_E 12 FCK-----NSADNKVVCSCTEGYRLAENQKSCEPAVPF---PCGRVSVSQ 53 (59)
T ss_dssp EEE-----ECSTTCEEEECCTTEEECTTSSCEEESSSS---CTTCCCSCC
T ss_pred EeE-----eCCCCCEEeeCCCCcEECCCCCcccCCCCC---CCCCccccc
Confidence 687 677 599999999997 6677765432 234445554
No 130
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=88.20 E-value=0.1 Score=41.36 Aligned_cols=18 Identities=22% Similarity=0.547 Sum_probs=15.1
Q ss_pred CCeEeeCCCCCCCCCCCc
Q psy11060 109 HRFNCTCPSGYHGKICEK 126 (155)
Q Consensus 109 ~~~~C~C~~g~~g~~C~~ 126 (155)
.++.|.|++||+|..|+.
T Consensus 458 ~tg~C~C~~g~~G~~Ce~ 475 (525)
T 4aqs_A 458 ETGYCYCKRLVTGQRCDQ 475 (525)
T ss_dssp TTCCBCBCTTCCSTTTCC
T ss_pred CCCEEECCCCCcCCCccc
Confidence 356799999999999963
No 131
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=85.30 E-value=0.52 Score=31.34 Aligned_cols=32 Identities=34% Similarity=0.835 Sum_probs=24.4
Q ss_pred CCCCCCeeecCccCCCCCCeEe-eCCCCCCCCCCCc
Q psy11060 92 TCLNGGTCKPYLVDETQHRFNC-TCPSGYHGKICEK 126 (155)
Q Consensus 92 ~c~~~~~C~~~~~~~~~~~~~C-~C~~g~~g~~C~~ 126 (155)
+|.+++.|... ...+.+.| .|+++|+|.+|+.
T Consensus 2 ~C~~~g~C~~~---~~~g~~~C~~C~~g~~G~~Ce~ 34 (162)
T 1klo_A 2 PCPGGSSCAIV---PKTKEVVCTHCPTGTAGKRCEL 34 (162)
T ss_dssp CSCTTCCEEEC---SSSCCEEECSCCTTEESTTSCE
T ss_pred cCcCcCccccc---CCCCCEEeCCCCCCCcCCCCcC
Confidence 67888889731 12256899 7999999999985
No 132
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=85.10 E-value=0.32 Score=31.88 Aligned_cols=32 Identities=22% Similarity=0.668 Sum_probs=23.6
Q ss_pred ecCCCCCCC--CCCCCCCeeecCccCCCCCCeEeeCCCCCC
Q psy11060 82 VELTGCVGP--DTCLNGGTCKPYLVDETQHRFNCTCPSGYH 120 (155)
Q Consensus 82 ~~~~~C~~~--~~c~~~~~C~~~~~~~~~~~~~C~C~~g~~ 120 (155)
.++++|... .+|. ..|. +..+++.|.|.+||.
T Consensus 115 ~d~~eC~~~~~~~C~--~~C~-----n~~g~~~C~C~~Gy~ 148 (159)
T 1nzi_A 115 TDINECTDFVDVPCS--HFCN-----NFIGGYFCSCPPEYF 148 (159)
T ss_dssp EECCTTTC-CCCCSS--SEEE-----EETTEEEEECCTTCE
T ss_pred ccCcccCCCCCCCCC--Cccc-----CcCCCEEEecCCCcE
Confidence 456788753 2464 4787 778899999999998
No 133
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=84.47 E-value=0.74 Score=31.49 Aligned_cols=27 Identities=33% Similarity=1.045 Sum_probs=21.6
Q ss_pred CCCCCC-eeEeCCCCeeeeCCCCCCCCCcee
Q psy11060 53 SPCKHG-SCVDKRAGYFCDCPPTYGGKNCSV 82 (155)
Q Consensus 53 ~~c~~~-~C~~~~~~~~c~C~~g~~g~~c~~ 82 (155)
.+|.++ .|+. + ..|.|++||.|..|+.
T Consensus 153 ~~C~ngG~Cv~-P--~~C~C~~Gw~G~~C~~ 180 (188)
T 2ygo_A 153 GGCRNGGFCNE-R--RICECPDGFHGPHCEG 180 (188)
T ss_dssp TCCCTTCEECT-T--SCEECCTTCBTTTTCB
T ss_pred CCCCCCCEeCC-C--CcccCcCCCCCCCCcC
Confidence 578886 8964 3 3999999999999974
No 134
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=82.44 E-value=0.92 Score=30.10 Aligned_cols=29 Identities=31% Similarity=1.028 Sum_probs=23.5
Q ss_pred cCCCCCCC-----CCCCeeEeCCCCeeeeCCCCCC
Q psy11060 47 LCPCAYSP-----CKHGSCVDKRAGYFCDCPPTYG 76 (155)
Q Consensus 47 ~~~C~~~~-----c~~~~C~~~~~~~~c~C~~g~~ 76 (155)
+++|...+ |.+ .|++..++|.|.|.+||.
T Consensus 124 i~eC~~~~~~~~~C~~-~C~n~~g~~~C~C~~Gy~ 157 (170)
T 1szb_A 124 IDECQVAPGEAPTCDH-HCHNHLGGFYCSCRAGYV 157 (170)
T ss_dssp CCTTCCCTTSCCSSSS-EEEEETTEEEEECCTTEE
T ss_pred cCcccCCCCCCCccCC-ccccCCCCEEEeCCCCcE
Confidence 57787543 665 899999999999999995
No 135
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=82.37 E-value=1.1 Score=33.30 Aligned_cols=36 Identities=25% Similarity=0.819 Sum_probs=19.6
Q ss_pred CCCCCCCCCCCCCeeecCccCCCCCCeEeeCCCCCC----CCCCCcC
Q psy11060 85 TGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYH----GKICEKI 127 (155)
Q Consensus 85 ~~C~~~~~c~~~~~C~~~~~~~~~~~~~C~C~~g~~----g~~C~~~ 127 (155)
++|.....|.+ .|. ++.++|.|.|++||. +..|...
T Consensus 2 ~ec~~~~~C~~--~C~-----n~~g~~~C~C~~g~~l~~d~~~C~~~ 41 (349)
T 3v64_C 2 NECAEEGYCSQ--GCT-----NSEGAFQCWCEAGYELRPDRRSCKAL 41 (349)
T ss_dssp -------CCSS--EEC-----CC---CCEECCTTEEECTTSSCEEES
T ss_pred cccCCCCCCcC--eee-----cCCCCeEEECCCCccCCCCCCccccc
Confidence 45542224654 788 788999999999997 5667543
No 136
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=81.92 E-value=0.21 Score=41.12 Aligned_cols=46 Identities=26% Similarity=0.632 Sum_probs=36.8
Q ss_pred eCCCCCCCCCceecCCCCCCCCCCCCCCeeecCccCCCCCCeEeeCCCCCCCCCCCcC
Q psy11060 70 DCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICEKI 127 (155)
Q Consensus 70 ~C~~g~~g~~c~~~~~~C~~~~~c~~~~~C~~~~~~~~~~~~~C~C~~g~~g~~C~~~ 127 (155)
.|.++|.|..|.+ ...|.. .|..+|.|. ...|.|.+||+|..|...
T Consensus 521 ~C~~gw~g~dc~i-~~~Cp~--~C~ghG~C~---------~G~C~Cd~G~~G~~C~~~ 566 (725)
T 2e26_A 521 DKQQTWAIDNVYI-GDGCLD--MCSGHGRCV---------QGSCVCDEQWGGLYCDEP 566 (725)
T ss_dssp CTTCCEEEEEEEE-ESCSSG--GGGGSEEEE---------TTEEEECTTEESTTSCEE
T ss_pred ccCCCcccccccc-cCCCCc--ccCCCcEEC---------CCCEeeCCCccCCCcCcc
Confidence 5788898888863 246765 599999998 358999999999999853
No 137
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=79.07 E-value=0.39 Score=37.14 Aligned_cols=32 Identities=31% Similarity=0.834 Sum_probs=0.0
Q ss_pred cCCCC--CCCCCCC-eeEeCCCCeeeeCCCCCCCCCce
Q psy11060 47 LCPCA--YSPCKHG-SCVDKRAGYFCDCPPTYGGKNCS 81 (155)
Q Consensus 47 ~~~C~--~~~c~~~-~C~~~~~~~~c~C~~g~~g~~c~ 81 (155)
++.|. ..||.++ +|.+.. .|.|++||.|..|+
T Consensus 363 g~~CD~~t~~C~ngg~C~~~~---~C~C~~G~~G~~Ce 397 (426)
T 3zyj_B 363 TNVCDNELLHCQNGGTCHNNV---RCLCPAAYTGILCE 397 (426)
T ss_dssp --------------------------------------
T ss_pred cCccccCcccCCCCCCcCCCC---CCcCCCCCcCCCCc
Confidence 44553 3578876 887654 89999999998886
No 138
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=71.99 E-value=0.47 Score=36.12 Aligned_cols=18 Identities=33% Similarity=0.831 Sum_probs=14.2
Q ss_pred CCeEe-eCCCCCCCCCCCc
Q psy11060 109 HRFNC-TCPSGYHGKICEK 126 (155)
Q Consensus 109 ~~~~C-~C~~g~~g~~C~~ 126 (155)
.+..| .|.++++|..|+.
T Consensus 332 ~~G~C~~C~~n~~G~~Ce~ 350 (375)
T 4aqt_A 332 HGGHCTNCRDNTDGAKCER 350 (375)
T ss_dssp CCEEECSCTTTEESTTSCE
T ss_pred CCCCCCCCCCCCcCCCCCC
Confidence 35678 4999999999964
No 139
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=71.79 E-value=1.7 Score=31.32 Aligned_cols=28 Identities=29% Similarity=0.713 Sum_probs=20.8
Q ss_pred eeecCccCCCCCCeEeeCCCCCC----CCCCCcCccc
Q psy11060 98 TCKPYLVDETQHRFNCTCPSGYH----GKICEKITTM 130 (155)
Q Consensus 98 ~C~~~~~~~~~~~~~C~C~~g~~----g~~C~~~~~~ 130 (155)
.|. ++.++|.|.|.+||. +..|...+++
T Consensus 16 ~C~-----~~~~~~~C~C~~G~~l~~d~~sC~p~~~c 47 (283)
T 3f1s_B 16 FCL-----PGQESYTCSCAQGYRLGEDHKQCVPHDQC 47 (283)
T ss_dssp BCC-----CCTTSCCCBCCTTEEECTTSSCEEECSTT
T ss_pred Eee-----CCCCCeEecCCCCcccCCCCCcccccccc
Confidence 576 678899999999987 5566655444
No 140
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=68.74 E-value=4.6 Score=26.11 Aligned_cols=29 Identities=45% Similarity=1.149 Sum_probs=22.5
Q ss_pred cCCCCC---CCCCCCeeEeCCCCeeeeCCCCCC
Q psy11060 47 LCPCAY---SPCKHGSCVDKRAGYFCDCPPTYG 76 (155)
Q Consensus 47 ~~~C~~---~~c~~~~C~~~~~~~~c~C~~g~~ 76 (155)
.++|.. .+|.+ .|.+..+.+.|.|.+||.
T Consensus 117 ~~eC~~~~~~~C~~-~C~n~~g~~~C~C~~Gy~ 148 (159)
T 1nzi_A 117 INECTDFVDVPCSH-FCNNFIGGYFCSCPPEYF 148 (159)
T ss_dssp CCTTTC-CCCCSSS-EEEEETTEEEEECCTTCE
T ss_pred CcccCCCCCCCCCC-cccCcCCCEEEecCCCcE
Confidence 567864 24643 898889999999999995
No 141
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=60.93 E-value=5.2 Score=28.64 Aligned_cols=28 Identities=14% Similarity=0.048 Sum_probs=17.9
Q ss_pred ceec-CCCcc-eeEEcCCceEEEcCCCCcc
Q psy11060 20 FSIG-TNSVL-NVIMLKSDYRLIIRPLYSL 47 (155)
Q Consensus 20 ~~~~-~~~~~-~c~~~~~~~~C~C~~g~~~ 47 (155)
|... .+.|. .|.+..++|.|.|..||..
T Consensus 5 C~~~~~~~C~~~C~~~~~~~~C~C~~G~~l 34 (283)
T 3f1s_B 5 CHPERTDGCQHFCLPGQESYTCSCAQGYRL 34 (283)
T ss_dssp CCSSCSSSCSSBCCCCTTSCCCBCCTTEEE
T ss_pred cCCCCCCCCCCEeeCCCCCeEecCCCCccc
Confidence 4433 34443 4777778888888888763
No 142
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=58.51 E-value=3.2 Score=30.68 Aligned_cols=17 Identities=6% Similarity=0.063 Sum_probs=8.2
Q ss_pred eeEEcCCceEEEcCCCC
Q psy11060 29 NVIMLKSDYRLIIRPLY 45 (155)
Q Consensus 29 ~c~~~~~~~~C~C~~g~ 45 (155)
.|.+..++|.|.|.+||
T Consensus 13 ~C~n~~g~~~C~C~~g~ 29 (349)
T 3v64_C 13 GCTNSEGAFQCWCEAGY 29 (349)
T ss_dssp EECCC---CCEECCTTE
T ss_pred eeecCCCCeEEECCCCc
Confidence 35566666666666554
No 143
>1h30_A GAS6, growth-arrest-specific protein; laminin G-domain protein, vitamin K-dependent protein, AXL/SKY/MER ligand, laminin G- like domain; 2.2A {Homo sapiens} SCOP: b.29.1.4 b.29.1.4 PDB: 2c5d_A*
Probab=53.79 E-value=3.2 Score=31.70 Aligned_cols=25 Identities=24% Similarity=0.255 Sum_probs=12.4
Q ss_pred ccCCCceEeec--CCCCCcceEEEEeC
Q psy11060 131 SFSGGSHIMLN--TTREEGYDISFILH 155 (155)
Q Consensus 131 ~~~~~~~~~~~--~~~~~~~~~~~~~~ 155 (155)
+|.+.+++.+. .......+|+|.||
T Consensus 44 ~F~g~~~~~~~f~~~~~~~~~is~~Fr 70 (422)
T 1h30_A 44 MFSGTPVIRLRFKRLQPTRLVAEFDFR 70 (422)
T ss_dssp -----CCEEEECCBSSCCCCEEEEEEE
T ss_pred EECCCceEEEEccCCCCCceEEEEEEE
Confidence 56666555543 33356777888886
No 144
>3fby_A COMP, cartilage oligomeric matrix protein; signature domain, cell adhesion, disease mutation, dwarfism, EGF-like domain, glycoprotein, secreted; HET: NAG MAN; 3.15A {Homo sapiens}
Probab=52.98 E-value=9.5 Score=30.45 Aligned_cols=37 Identities=24% Similarity=0.639 Sum_probs=27.0
Q ss_pred CCCCCC--CCCCCCCeeecCccCCCCCCeEeeCCCCCC--CCCCC
Q psy11060 85 TGCVGP--DTCLNGGTCKPYLVDETQHRFNCTCPSGYH--GKICE 125 (155)
Q Consensus 85 ~~C~~~--~~c~~~~~C~~~~~~~~~~~~~C~C~~g~~--g~~C~ 125 (155)
..|... ++|+..+.|+. ...+.|.|.|+.||. |..|.
T Consensus 19 ~~c~~~~~~~c~~~a~C~~----~~~~~~~c~C~~G~ag~G~~c~ 59 (551)
T 3fby_A 19 RFCPDGSPSECHEHADCVL----ERDGSRSCVCAVGWAGNGILCG 59 (551)
T ss_dssp CBCTTSSBCCCCTTEEEEE----CTTSCEEEEECTTEESSSSSCE
T ss_pred ccCCCCCCCCCCCCCeeEe----CCCCCEecCCCCCCCCCCcccC
Confidence 346543 48999999984 356778999999998 45554
No 145
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=51.49 E-value=3.6 Score=33.97 Aligned_cols=40 Identities=23% Similarity=0.513 Sum_probs=29.0
Q ss_pred EcCCCCccCCCC-CCC----CCC-CeeEeCCCCeeeeCCCCCCCCCceec
Q psy11060 40 IIRPLYSLCPCA-YSP----CKH-GSCVDKRAGYFCDCPPTYGGKNCSVE 83 (155)
Q Consensus 40 ~C~~g~~~~~C~-~~~----c~~-~~C~~~~~~~~c~C~~g~~g~~c~~~ 83 (155)
.|.++|.++.|. ... |.. |.|+.. .|.|.+||.|..|...
T Consensus 521 ~C~~gw~g~dc~i~~~Cp~~C~ghG~C~~G----~C~Cd~G~~G~~C~~~ 566 (725)
T 2e26_A 521 DKQQTWAIDNVYIGDGCLDMCSGHGRCVQG----SCVCDEQWGGLYCDEP 566 (725)
T ss_dssp CTTCCEEEEEEEEESCSSGGGGGSEEEETT----EEEECTTEESTTSCEE
T ss_pred ccCCCcccccccccCCCCcccCCCcEECCC----CEeeCCCccCCCcCcc
Confidence 578888877776 233 433 488765 8999999999888754
No 146
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=48.13 E-value=23 Score=25.51 Aligned_cols=29 Identities=21% Similarity=0.582 Sum_probs=19.7
Q ss_pred cCCCCCC-----CCCCCeeEeCC------CCeeeeCCCCCC
Q psy11060 47 LCPCAYS-----PCKHGSCVDKR------AGYFCDCPPTYG 76 (155)
Q Consensus 47 ~~~C~~~-----~c~~~~C~~~~------~~~~c~C~~g~~ 76 (155)
.++|... .|++ .|+..+ +.++|.|+.||.
T Consensus 267 ~n~C~~~~~~ng~Cs~-~C~~~p~~~~~~~~~~C~C~~g~~ 306 (316)
T 1ijq_A 267 VNWCERTTLSNGGCQY-LCLPAPQINPHSPKFTCACPDGML 306 (316)
T ss_dssp CCTTSSSSSGGGGCSS-EEEECCCCSTTCCSEEEECCTTCE
T ss_pred cccccccccCCCCcCc-ccCCCccccCCCCCeEeeCCCCCE
Confidence 3556543 3544 788764 579999999983
No 147
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=46.37 E-value=18 Score=26.23 Aligned_cols=17 Identities=41% Similarity=1.249 Sum_probs=13.3
Q ss_pred CeEeeCCCCCC----CCCCCc
Q psy11060 110 RFNCTCPSGYH----GKICEK 126 (155)
Q Consensus 110 ~~~C~C~~g~~----g~~C~~ 126 (155)
++.|.|+.||. +..|.+
T Consensus 289 ~~~C~C~~g~~l~~d~~~c~~ 309 (318)
T 3sov_A 289 FYQCACPTGVKLLENGKTCKD 309 (318)
T ss_dssp SEEEECSTTCCBCTTSSCBCC
T ss_pred CeEEECCCCCEECCCCCCCCC
Confidence 69999999987 555654
No 148
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=44.56 E-value=14 Score=26.85 Aligned_cols=43 Identities=30% Similarity=0.694 Sum_probs=28.6
Q ss_pred eeeCCCCCCCCCceecCC---------CCCCC---CCCCCCCeeecCccCCCCCCeEeeCCCCC
Q psy11060 68 FCDCPPTYGGKNCSVELT---------GCVGP---DTCLNGGTCKPYLVDETQHRFNCTCPSGY 119 (155)
Q Consensus 68 ~c~C~~g~~g~~c~~~~~---------~C~~~---~~c~~~~~C~~~~~~~~~~~~~C~C~~g~ 119 (155)
.|.|.+||.|..|+-..+ .|... ..|...|.|. -..|.|..++
T Consensus 208 ~C~C~~g~~G~~CeC~~~~~~~~~~~~~C~~~~~~~~CSgrG~C~---------CG~C~C~~~~ 262 (280)
T 2p26_A 208 ICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCV---------CGQCLCHTSD 262 (280)
T ss_dssp EEEECTTEESTTSCEECTTSCHHHHHHTTCSSTTSCGGGGSEEEE---------TTEEEECCCS
T ss_pred ceeCCCCCcCCcceecCCccccccccccCCCCCCCCccCCCceEe---------CCeeECcCCC
Confidence 788999999999863322 46421 1366667776 3578886665
No 149
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=37.63 E-value=21 Score=30.32 Aligned_cols=39 Identities=31% Similarity=0.599 Sum_probs=29.6
Q ss_pred CCCCCCCCCCCCCCeeecCccCCCCCCeEeeCCCCCCCCCCCcCc
Q psy11060 84 LTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICEKIT 128 (155)
Q Consensus 84 ~~~C~~~~~c~~~~~C~~~~~~~~~~~~~C~C~~g~~g~~C~~~~ 128 (155)
.+.|.-. ||.+++.+. .......|.|+++|.|..|+...
T Consensus 497 ~~~c~C~-PC~ngg~~~-----l~g~~C~C~C~~g~~G~~Ce~~~ 535 (913)
T 3t5o_A 497 FDPCQCA-PCPNNGRPT-----LSGTECLCVCQSGTYGENCEKQS 535 (913)
T ss_dssp TCGGGSC-CBTTTBEEE-----EETTEEEEECCTTBCSTTSCCBC
T ss_pred cccccCC-CCCCCCEee-----cCCCceEEEccCCccccCccCcc
Confidence 3455444 899999887 34456789999999999998754
No 150
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=33.29 E-value=40 Score=28.65 Aligned_cols=29 Identities=24% Similarity=0.586 Sum_probs=14.6
Q ss_pred CCCCCC-eeEeCCCCeeeeCCCCCCCCCce
Q psy11060 53 SPCKHG-SCVDKRAGYFCDCPPTYGGKNCS 81 (155)
Q Consensus 53 ~~c~~~-~C~~~~~~~~c~C~~g~~g~~c~ 81 (155)
.||.++ .++.......|.|+++|.|..|+
T Consensus 503 ~PC~ngg~~~l~g~~C~C~C~~g~~G~~Ce 532 (913)
T 3t5o_A 503 APCPNNGRPTLSGTECLCVCQSGTYGENCE 532 (913)
T ss_dssp CCBTTTBEEEEETTEEEEECCTTBCSTTSC
T ss_pred CCCCCCCEeecCCCceEEEccCCccccCcc
Confidence 355554 44443444455555555555554
No 151
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=32.91 E-value=22 Score=28.69 Aligned_cols=37 Identities=24% Similarity=0.698 Sum_probs=24.3
Q ss_pred CCCCCCC-CCCCCCCeeecCccCCCC-CCeEeeCCCCCC----CCCCCcC
Q psy11060 84 LTGCVGP-DTCLNGGTCKPYLVDETQ-HRFNCTCPSGYH----GKICEKI 127 (155)
Q Consensus 84 ~~~C~~~-~~c~~~~~C~~~~~~~~~-~~~~C~C~~g~~----g~~C~~~ 127 (155)
.++|... ..|. ..|. +.+ ++|.|.|++||. +..|...
T Consensus 265 ~n~C~~~ng~C~--~~C~-----~~~~~~~~C~C~~g~~l~~d~~~C~~~ 307 (628)
T 4a0p_A 265 WNECASSNGHCS--HLCL-----AVPVGGFVCGCPAHYSLNADNRTCSAP 307 (628)
T ss_dssp CCTTTTTGGGCS--SEEE-----EETTTEEEEECSTTCEECTTSSCEECC
T ss_pred ceEeccCCCCcc--hhhh-----cCCCCCeeEEcCCCcEecccCCcCccc
Confidence 4566543 2343 3676 556 889999999997 5667543
No 152
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=29.21 E-value=25 Score=28.34 Aligned_cols=29 Identities=10% Similarity=0.088 Sum_probs=19.8
Q ss_pred CceecCCCcc-eeEEcC-CceEEEcCCCCcc
Q psy11060 19 QFSIGTNSVL-NVIMLK-SDYRLIIRPLYSL 47 (155)
Q Consensus 19 ~~~~~~~~~~-~c~~~~-~~~~C~C~~g~~~ 47 (155)
+|......|. .|.+.. ++|.|.|+.||..
T Consensus 267 ~C~~~ng~C~~~C~~~~~~~~~C~C~~g~~l 297 (628)
T 4a0p_A 267 ECASSNGHCSHLCLAVPVGGFVCGCPAHYSL 297 (628)
T ss_dssp TTTTTGGGCSSEEEEETTTEEEEECSTTCEE
T ss_pred EeccCCCCcchhhhcCCCCCeeEEcCCCcEe
Confidence 3443333443 478877 8899999999873
No 153
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=28.02 E-value=67 Score=24.59 Aligned_cols=18 Identities=28% Similarity=0.508 Sum_probs=15.3
Q ss_pred CCeEee-CCCCCCCCCCCc
Q psy11060 109 HRFNCT-CPSGYHGKICEK 126 (155)
Q Consensus 109 ~~~~C~-C~~g~~g~~C~~ 126 (155)
++..|. |.++++|..|+.
T Consensus 355 ~~G~C~~C~~nt~G~~CEr 373 (403)
T 2y38_A 355 GGGVCLDCQHHTTGINCER 373 (403)
T ss_dssp CCEEESSCCSSEESTTSCE
T ss_pred CCCCCCCCcCcCcCCCCCc
Confidence 467895 999999999984
No 154
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=27.83 E-value=29 Score=27.90 Aligned_cols=20 Identities=35% Similarity=1.044 Sum_probs=13.5
Q ss_pred CCCCeeEeCCCCeeeeCCCCC
Q psy11060 55 CKHGSCVDKRAGYFCDCPPTY 75 (155)
Q Consensus 55 c~~~~C~~~~~~~~c~C~~g~ 75 (155)
|++ .|+..++.+.|.|+.||
T Consensus 588 C~~-~C~~~~~~~~C~C~~g~ 607 (619)
T 3s94_A 588 CSH-LCLYRPQGLRCACPIGF 607 (619)
T ss_dssp CSS-EEEEETTEEEEECCTTC
T ss_pred hhH-hhccCCCCeEEECCCCC
Confidence 443 67766666777777776
Done!