RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy11060
         (155 letters)



>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin
          IIa) {Human (Homo sapiens) [TaxId: 9606]}
          Length = 48

 Score = 44.8 bits (106), Expect = 5e-08
 Identities = 14/37 (37%), Positives = 21/37 (56%)

Query: 49 PCAYSPCKHGSCVDKRAGYFCDCPPTYGGKNCSVELT 85
          PCA   C HG+C+D    + CDC   + G+ C  E++
Sbjct: 10 PCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVS 46



 Score = 26.7 bits (59), Expect = 0.27
 Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 6/34 (17%)

Query: 93  CLNGGTCKPYLVDETQHRFNCTCPSGYHGKICEK 126
           C +G         +    F+C C SG+ G+ C++
Sbjct: 16  CGHGTCI------DGIGSFSCDCRSGWEGRFCQR 43


>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens)
          [TaxId: 9606]}
          Length = 39

 Score = 40.4 bits (95), Expect = 2e-06
 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)

Query: 49 PCAYSPCKH-GSCVDKRAGYFCDCPPTYGGKNCSV 82
           C  +PC + GSC D    Y C CP  + GKNC +
Sbjct: 5  QCESNPCLNGGSCKDDINSYECWCPFGFEGKNCEL 39



 Score = 33.9 bits (78), Expect = 5e-04
 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 5/36 (13%)

Query: 90  PDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICE 125
            + CLNGG+CK     +  + + C CP G+ GK CE
Sbjct: 8   SNPCLNGGSCK-----DDINSYECWCPFGFEGKNCE 38


>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog
          protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
          Length = 39

 Score = 40.0 bits (94), Expect = 3e-06
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)

Query: 49 PCAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNCSV 82
           C  +PC++  +C+D+   + C C P Y G +C V
Sbjct: 3  ECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEV 37



 Score = 33.1 bits (76), Expect = 9e-04
 Identities = 12/36 (33%), Positives = 14/36 (38%), Gaps = 5/36 (13%)

Query: 90  PDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICE 125
            + C N  TC      +    F C C  GY G  CE
Sbjct: 6   SNPCQNDATCL-----DQIGEFQCICMPGYEGVHCE 36


>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human
          (Homo sapiens) [TaxId: 9606]}
          Length = 39

 Score = 40.1 bits (94), Expect = 3e-06
 Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 1/36 (2%)

Query: 49 PCAYSPCKH-GSCVDKRAGYFCDCPPTYGGKNCSVE 83
           C  SPC++ G C D    Y C C   + GKNC + 
Sbjct: 2  QCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELF 37



 Score = 33.5 bits (77), Expect = 7e-04
 Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 5/36 (13%)

Query: 90  PDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICE 125
              C N G CK     +    + CTC  G+ GK CE
Sbjct: 5   TSPCQNQGKCK-----DGLGEYTCTCLEGFEGKNCE 35


>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa)
          [TaxId: 9823]}
          Length = 37

 Score = 39.3 bits (92), Expect = 5e-06
 Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)

Query: 49 PCAYSPCKHG-SCVDKRAGYFCDCPPTYGGKNC 80
           CA SPC++G SC D+   Y C C P + G+NC
Sbjct: 4  QCASSPCQNGGSCKDQLQSYICFCLPAFEGRNC 36



 Score = 33.5 bits (77), Expect = 7e-04
 Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 5/36 (13%)

Query: 90  PDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICE 125
              C NGG+CK     +    + C C   + G+ CE
Sbjct: 7   SSPCQNGGSCK-----DQLQSYICFCLPAFEGRNCE 37


>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog
          protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
          Length = 35

 Score = 38.9 bits (91), Expect = 6e-06
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)

Query: 49 PCAYSPCKH-GSCVDKRAGYFCDCPPTYGGKNC 80
           CA SPC H G C+DK   + C+CP  + G  C
Sbjct: 2  ECASSPCLHNGRCLDKINEFQCECPTGFTGHLC 34



 Score = 32.7 bits (75), Expect = 0.001
 Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 5/36 (13%)

Query: 90  PDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICE 125
              CL+ G C      +  + F C CP+G+ G +C+
Sbjct: 5   SSPCLHNGRCL-----DKINEFQCECPTGFTGHLCQ 35


>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog
          protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}
          Length = 42

 Score = 37.8 bits (88), Expect = 2e-05
 Identities = 11/36 (30%), Positives = 17/36 (47%), Gaps = 1/36 (2%)

Query: 48 CPCAYSPCKH-GSCVDKRAGYFCDCPPTYGGKNCSV 82
          C    +PC+H G C++    + C C   Y G  C +
Sbjct: 6  CSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEI 41



 Score = 35.5 bits (82), Expect = 2e-04
 Identities = 13/37 (35%), Positives = 15/37 (40%), Gaps = 5/37 (13%)

Query: 89  GPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICE 125
           G + C + G C       T   F C C  GY G  CE
Sbjct: 9   GANPCEHAGKCI-----NTLGSFECQCLQGYTGPRCE 40


>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo
          sapiens) [TaxId: 9606]}
          Length = 39

 Score = 37.4 bits (87), Expect = 2e-05
 Identities = 11/33 (33%), Positives = 14/33 (42%), Gaps = 1/33 (3%)

Query: 49 PCAYSPCKH-GSCVDKRAGYFCDCPPTYGGKNC 80
           C  + C   G CV+    Y C C P + G  C
Sbjct: 3  ACTNTSCSGHGECVETINNYTCKCDPGFSGLKC 35



 Score = 31.3 bits (71), Expect = 0.005
 Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 5/37 (13%)

Query: 90  PDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICEK 126
             +C   G C      ET + + C C  G+ G  CE+
Sbjct: 6   NTSCSGHGECV-----ETINNYTCKCDPGFSGLKCEQ 37


>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo
           sapiens) [TaxId: 9606]}
          Length = 63

 Score = 37.7 bits (87), Expect = 4e-05
 Identities = 12/41 (29%), Positives = 16/41 (39%)

Query: 93  CLNGGTCKPYLVDETQHRFNCTCPSGYHGKICEKITTMSFS 133
           C+NGG C          R+ C C  G+ G  C +   M   
Sbjct: 14  CVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVPMKVQ 54



 Score = 34.2 bits (78), Expect = 6e-04
 Identities = 9/46 (19%), Positives = 16/46 (34%), Gaps = 6/46 (13%)

Query: 49 PCAYSPCKHGSC------VDKRAGYFCDCPPTYGGKNCSVELTGCV 88
              + C +G        +   + Y C C P + G  C+  +   V
Sbjct: 8  EKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVPMKV 53


>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo
          sapiens) [TaxId: 9606]}
          Length = 40

 Score = 36.7 bits (85), Expect = 4e-05
 Identities = 10/33 (30%), Positives = 13/33 (39%), Gaps = 1/33 (3%)

Query: 49 PCAYSPCKH-GSCVDKRAGYFCDCPPTYGGKNC 80
           C    C   G C++    Y C C P + G  C
Sbjct: 3  SCQDMSCSKQGECLETIGNYTCSCYPGFYGPEC 35



 Score = 32.1 bits (73), Expect = 0.002
 Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 5/38 (13%)

Query: 90  PDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICEKI 127
             +C   G C      ET   + C+C  G++G  CE +
Sbjct: 6   DMSCSKQGECL-----ETIGNYTCSCYPGFYGPECEYV 38


>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus
           musculus) [TaxId: 10090]}
          Length = 53

 Score = 36.8 bits (85), Expect = 5e-05
 Identities = 16/58 (27%), Positives = 21/58 (36%), Gaps = 17/58 (29%)

Query: 68  FCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICE 125
           +  CP +Y                 CLNGG C      E+   + C C  GY G  C+
Sbjct: 3   YPGCPSSY--------------DGYCLNGGVCMH---IESLDSYTCNCVIGYSGDRCQ 43



 Score = 33.3 bits (76), Expect = 0.001
 Identities = 8/35 (22%), Positives = 12/35 (34%), Gaps = 3/35 (8%)

Query: 49 PCAYSPCKHG---SCVDKRAGYFCDCPPTYGGKNC 80
                C +G     ++    Y C+C   Y G  C
Sbjct: 8  SSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRC 42


>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId:
           9606]}
          Length = 50

 Score = 34.4 bits (79), Expect = 3e-04
 Identities = 17/65 (26%), Positives = 23/65 (35%), Gaps = 18/65 (27%)

Query: 64  RAGYFCDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKI 123
           R G+F  CP  Y                 C+ G     ++V E      C C  GY G  
Sbjct: 1   RKGHFSRCPKQYK--------------HYCIKGRCR--FVVAEQTPS--CVCDEGYIGAR 42

Query: 124 CEKIT 128
           CE++ 
Sbjct: 43  CERVD 47


>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like
          module {Sheep (Ovis aries) [TaxId: 9940]}
          Length = 42

 Score = 34.0 bits (78), Expect = 4e-04
 Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 3/37 (8%)

Query: 49 PCAYSPCKH-GSCVDKRA-GYFCDCPPT-YGGKNCSV 82
          PC Y PC+H G CV      Y CDC  T Y G NC++
Sbjct: 4  PCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTI 40



 Score = 31.7 bits (72), Expect = 0.004
 Identities = 11/38 (28%), Positives = 14/38 (36%), Gaps = 5/38 (13%)

Query: 90  PDTCLNGGTCKPYLVDETQHRFNCTCP-SGYHGKICEK 126
              C + G C    V     R+ C C  +GY G  C  
Sbjct: 7   YYPCQHQGIC----VRFGLDRYQCDCTRTGYSGPNCTI 40


>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo
           sapiens) [TaxId: 9606]}
          Length = 48

 Score = 33.7 bits (77), Expect = 7e-04
 Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 3/33 (9%)

Query: 93  CLNGGTCKPYLVDETQHRFNCTCPSGYHGKICE 125
           CL+ G C      E   ++ C C  GY G+ C+
Sbjct: 12  CLHDGVCMY---IEALDKYACNCVVGYIGERCQ 41



 Score = 31.4 bits (71), Expect = 0.006
 Identities = 11/35 (31%), Positives = 14/35 (40%), Gaps = 3/35 (8%)

Query: 49 PCAYSPCKH-GSCVDKRAG--YFCDCPPTYGGKNC 80
                C H G C+   A   Y C+C   Y G+ C
Sbjct: 6  LSHDGYCLHDGVCMYIEALDKYACNCVVGYIGERC 40


>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo
           sapiens) [TaxId: 9606]}
          Length = 49

 Score = 32.9 bits (75), Expect = 0.001
 Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 4/39 (10%)

Query: 93  CLNGGTCKPYLVDETQHRFNCTCPSGYHGKICEKITTMS 131
           C +G     +LV E +    C C SGY G  CE    ++
Sbjct: 15  CFHGTCR--FLVQEDKPA--CVCHSGYVGARCEHADLLA 49



 Score = 26.3 bits (58), Expect = 0.40
 Identities = 11/39 (28%), Positives = 18/39 (46%), Gaps = 3/39 (7%)

Query: 45 YSLCPCAY-SPCKHGSC--VDKRAGYFCDCPPTYGGKNC 80
          ++ CP ++   C HG+C  + +     C C   Y G  C
Sbjct: 4  FNDCPDSHTQFCFHGTCRFLVQEDKPACVCHSGYVGARC 42


>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type),
           t-PA {Human (Homo sapiens) [TaxId: 9606]}
          Length = 41

 Score = 32.5 bits (74), Expect = 0.001
 Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 3/36 (8%)

Query: 90  PDTCLNGGTCKPYLVDETQHRFNCTCPSGYHGKICE 125
              C NGGTC+          F C CP G+ GK CE
Sbjct: 3   EPRCFNGGTCQQ---ALYFSDFVCQCPEGFAGKSCE 35



 Score = 32.5 bits (74), Expect = 0.002
 Identities = 10/37 (27%), Positives = 19/37 (51%), Gaps = 3/37 (8%)

Query: 50 CAYSPCKH-GSCVDKR--AGYFCDCPPTYGGKNCSVE 83
          C+   C + G+C      + + C CP  + GK+C ++
Sbjct: 1  CSEPRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEID 37


>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like
          module {Mouse (Mus musculus) [TaxId: 10090]}
          Length = 41

 Score = 32.5 bits (74), Expect = 0.002
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 3/37 (8%)

Query: 49 PCAYSPCKH-GSCVD-KRAGYFCDCP-PTYGGKNCSV 82
          PC  +PC++ G C+      Y CDC    + G+NC+ 
Sbjct: 3  PCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTT 39



 Score = 32.1 bits (73), Expect = 0.003
 Identities = 9/38 (23%), Positives = 17/38 (44%), Gaps = 5/38 (13%)

Query: 90  PDTCLNGGTCKPYLVDETQHRFNCTCP-SGYHGKICEK 126
            + C N G C    +     ++ C C  +G++G+ C  
Sbjct: 6   SNPCQNRGEC----MSTGFDQYKCDCTRTGFYGENCTT 39


>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens)
           [TaxId: 9606]}
          Length = 46

 Score = 29.7 bits (67), Expect = 0.016
 Identities = 15/36 (41%), Positives = 18/36 (50%), Gaps = 4/36 (11%)

Query: 93  CLNGGTCKPYLVDETQHRFNCTCPSGYHGKICEKIT 128
           CL+G     YLVD +Q+   C C  GY G  CE   
Sbjct: 14  CLHGQCI--YLVDMSQNY--CRCEVGYTGVRCEHFF 45



 Score = 27.1 bits (60), Expect = 0.18
 Identities = 9/34 (26%), Positives = 12/34 (35%), Gaps = 2/34 (5%)

Query: 49 PCAYSPCKHGSC--VDKRAGYFCDCPPTYGGKNC 80
                C HG C  +   +  +C C   Y G  C
Sbjct: 8  SDMNGYCLHGQCIYLVDMSQNYCRCEVGYTGVRC 41


>d2i9aa1 g.3.11.1 (A:10-49) Plasminogen activator (urokinase-type)
           {Human (Homo sapiens) [TaxId: 9606]}
          Length = 40

 Score = 29.5 bits (66), Expect = 0.023
 Identities = 14/33 (42%), Positives = 16/33 (48%), Gaps = 2/33 (6%)

Query: 93  CLNGGTCKPYLVDETQHRFNCTCPSGYHGKICE 125
           CLNGGTC         H   C CP  + G+ CE
Sbjct: 4   CLNGGTCVSNKYFSNIHW--CNCPKKFGGQHCE 34


>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens)
          [TaxId: 9606]}
          Length = 44

 Score = 29.0 bits (65), Expect = 0.028
 Identities = 10/33 (30%), Positives = 12/33 (36%), Gaps = 5/33 (15%)

Query: 53 SPCKHGSCVDKRAGYFCDCPPTY-----GGKNC 80
            C  G CV+    + C C   Y       KNC
Sbjct: 11 DLCGRGQCVNTPGDFECKCDEGYESGFMMMKNC 43


>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens)
          [TaxId: 9606]}
          Length = 43

 Score = 27.1 bits (60), Expect = 0.15
 Identities = 8/32 (25%), Positives = 13/32 (40%), Gaps = 4/32 (12%)

Query: 53 SPCKHGSCVDKRAGYFCDCPPTY----GGKNC 80
            C+ G C++    + C CP  Y      + C
Sbjct: 11 GLCQGGKCINTFGSFQCRCPTGYYLNEDTRVC 42


>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens)
          [TaxId: 9606]}
          Length = 42

 Score = 26.3 bits (58), Expect = 0.28
 Identities = 8/23 (34%), Positives = 12/23 (52%)

Query: 53 SPCKHGSCVDKRAGYFCDCPPTY 75
            C+ G C +    Y C+CPP +
Sbjct: 10 LLCRGGVCHNTEGSYRCECPPGH 32


>d1xdtr_ g.3.11.1 (R:) Heparin-binding epidermal growth factor,
           HBEGF {Human (Homo sapiens) [TaxId: 9606]}
          Length = 41

 Score = 25.9 bits (57), Expect = 0.38
 Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 4/36 (11%)

Query: 93  CLNGGTCKPYLVDETQHRFNCTCPSGYHGKICEKIT 128
           C++G  CK Y+ +       C C  GYHG+ C  ++
Sbjct: 10  CIHG-ECK-YVKELRAPS--CICHPGYHGERCHGLS 41


>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens)
          [TaxId: 9606]}
          Length = 43

 Score = 25.9 bits (57), Expect = 0.40
 Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 2/30 (6%)

Query: 53 SPCKHGSCVDKRAGYFCDCPPTY--GGKNC 80
            CKHG C++    Y C+CP  Y   G  C
Sbjct: 12 DVCKHGQCINTDGSYRCECPFGYILAGNEC 41



 Score = 25.1 bits (55), Expect = 0.93
 Identities = 11/35 (31%), Positives = 12/35 (34%)

Query: 87  CVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYHG 121
            V  D C     CK      T   + C CP GY  
Sbjct: 2   AVDMDECKEPDVCKHGQCINTDGSYRCECPFGYIL 36


>d1kloa1 g.3.11.2 (A:11-65) Laminin gamma1 chain {Mouse (Mus
           musculus) [TaxId: 10090]}
          Length = 55

 Score = 26.0 bits (57), Expect = 0.56
 Identities = 13/56 (23%), Positives = 18/56 (32%), Gaps = 6/56 (10%)

Query: 48  CPCAYSPCKHGSCVDKRAGYF--CDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKP 101
           CPC   P      +  +        CP    GK C +   G  G D   + G  + 
Sbjct: 1   CPC---PGGSSCAIVPKTKEVVCTHCPTGTAGKRCELCDDGYFG-DPLGSNGPVRL 52


>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens)
          [TaxId: 9606]}
          Length = 43

 Score = 23.7 bits (51), Expect = 2.6
 Identities = 10/23 (43%), Positives = 14/23 (60%)

Query: 53 SPCKHGSCVDKRAGYFCDCPPTY 75
          + C  G+CV+    Y CDCPP +
Sbjct: 10 TTCISGNCVNTPGSYICDCPPDF 32


>d2hoxa1 c.67.1.1 (A:1-425) Alliinase {Garlic (Allium sativum)
           [TaxId: 4682]}
          Length = 425

 Score = 25.8 bits (56), Expect = 2.9
 Identities = 11/56 (19%), Positives = 19/56 (33%), Gaps = 8/56 (14%)

Query: 69  CDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDE--TQHRFNCTC-PSGYHG 121
           C+C   Y G +CS             +  +     ++E   QH+       S +H 
Sbjct: 39  CECNTCYTGPDCSE-----KIQGCSADVASGDGLFLEEYWKQHKEASAVLVSPWHR 89


>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo
          sapiens) [TaxId: 9606]}
          Length = 53

 Score = 23.8 bits (51), Expect = 3.2
 Identities = 11/40 (27%), Positives = 13/40 (32%), Gaps = 4/40 (10%)

Query: 48 CPCAYSPCKHGSCVDKRAGYFCDCPPTY----GGKNCSVE 83
                P     C +   GYFC C P Y       +C  E
Sbjct: 14 GEEDPQPQCQHLCHNYVGGYFCSCRPGYELQEDRHSCQAE 53



 Score = 23.0 bits (49), Expect = 6.6
 Identities = 7/50 (14%), Positives = 11/50 (22%), Gaps = 9/50 (18%)

Query: 80  CSVELTGCVGPDTCLNGGTCKPYLVDETQHRFNCTCPSGYH----GKICE 125
           C+                 C           + C+C  GY        C+
Sbjct: 7   CASRSKSGEEDPQPQCQHLCHN-----YVGGYFCSCRPGYELQEDRHSCQ 51


>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like
          domains {Human (Homo sapiens) [TaxId: 9606]}
          Length = 40

 Score = 23.2 bits (50), Expect = 4.2
 Identities = 6/26 (23%), Positives = 8/26 (30%)

Query: 50 CAYSPCKHGSCVDKRAGYFCDCPPTY 75
          C       G C +    + C C P  
Sbjct: 5  CENGGFCSGVCHNLPGTFECICGPDS 30


>d1h30a1 b.29.1.4 (A:261-451) Growth-arrest-specific protein Gas6
           {Human (Homo sapiens) [TaxId: 9606]}
          Length = 191

 Score = 24.4 bits (52), Expect = 5.8
 Identities = 8/44 (18%), Positives = 12/44 (27%), Gaps = 3/44 (6%)

Query: 69  CDCPPTYGGKNCSVELTGCVGPDTCLNGGTCKPYLVDETQHRFN 112
           CD      G   S ++  C     C+     K          F+
Sbjct: 2   CDGRG---GLKLSQDMDTCEDILPCVPFSVAKSVKSLYLGRMFS 42


>d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon
           Archaeoglobus fulgidus [TaxId: 2234]}
          Length = 308

 Score = 24.4 bits (53), Expect = 6.6
 Identities = 7/31 (22%), Positives = 11/31 (35%)

Query: 121 GKICEKITTMSFSGGSHIMLNTTREEGYDIS 151
            KI E +  +     + IM      +G D  
Sbjct: 172 RKIVESVKAVGAGEKAKIMRGYCESKGIDFP 202


>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor,
           different EGF domains {Human (Homo sapiens) [TaxId:
           9606]}
          Length = 41

 Score = 22.4 bits (48), Expect = 7.7
 Identities = 10/41 (24%), Positives = 17/41 (41%), Gaps = 5/41 (12%)

Query: 91  DTCLNGGTCKPYLVDETQHRFNCTCPSGYH----GKICEKI 127
           D C +  TC    V+  +  + C C  G+      K C+ +
Sbjct: 2   DECQDPDTCSQLCVN-LEGGYKCQCEEGFQLDPHTKACKAV 41


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.324    0.142    0.471 

Gapped
Lambda     K      H
   0.267   0.0607    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 617,965
Number of extensions: 29747
Number of successful extensions: 200
Number of sequences better than 10.0: 1
Number of HSP's gapped: 162
Number of HSP's successfully gapped: 108
Length of query: 155
Length of database: 2,407,596
Length adjustment: 78
Effective length of query: 77
Effective length of database: 1,336,656
Effective search space: 102922512
Effective search space used: 102922512
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 49 (22.9 bits)