Query psy11061
Match_columns 212
No_of_seqs 141 out of 1430
Neff 9.7
Searched_HMMs 29240
Date Fri Aug 16 17:05:48 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11061.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11061hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2a62_A Cadherin-8; extracellul 100.0 1.5E-45 5E-50 298.1 18.7 206 1-211 34-250 (322)
2 1l3w_A EP-cadherin, C-cadherin 100.0 2.3E-42 7.9E-47 297.4 22.9 207 1-210 39-262 (546)
3 3q2w_A Cadherin-2; cell adhesi 100.0 6.2E-42 2.1E-46 295.6 25.7 204 1-207 33-253 (559)
4 3q2v_A Cadherin-1; cell adhesi 100.0 3.8E-42 1.3E-46 296.4 23.9 207 1-210 33-254 (550)
5 3ubf_A Neural-cadherin; cell a 100.0 7E-41 2.4E-45 270.5 23.8 200 2-211 33-248 (316)
6 1q55_A EP-cadherin, C-cadherin 100.0 6.5E-41 2.2E-45 301.1 22.9 206 1-209 188-410 (880)
7 2a4e_A Cadherin-11; dimer, cal 100.0 6.7E-39 2.3E-43 245.2 22.7 170 1-175 35-215 (215)
8 3ubh_A Neural-cadherin; cell a 100.0 5.6E-39 1.9E-43 268.5 24.0 198 1-204 26-247 (419)
9 3q2w_A Cadherin-2; cell adhesi 100.0 3.4E-39 1.2E-43 278.5 21.7 207 1-211 144-373 (559)
10 3ubh_A Neural-cadherin; cell a 100.0 8E-39 2.7E-43 267.5 23.2 202 2-211 146-360 (419)
11 1l3w_A EP-cadherin, C-cadherin 100.0 1.4E-39 4.7E-44 280.2 18.5 206 1-211 151-373 (546)
12 3q2v_A Cadherin-1; cell adhesi 100.0 9.5E-39 3.2E-43 275.3 23.7 206 1-211 145-367 (550)
13 1q55_A EP-cadherin, C-cadherin 100.0 4.1E-38 1.4E-42 283.0 18.5 206 1-211 300-522 (880)
14 2x2u_A Proto-oncogene tyrosine 100.0 7.8E-39 2.7E-43 249.7 6.4 162 13-177 55-245 (246)
15 3mvs_A Cadherin-23, otocadheri 100.0 2.2E-36 7.7E-41 230.8 19.9 167 1-173 41-210 (210)
16 3qrb_A Cadherin-1; cell adhesi 100.0 7.6E-36 2.6E-40 228.3 21.3 166 1-168 33-213 (213)
17 2qvi_A Cadherin-2; beta barrel 100.0 8.9E-36 3.1E-40 228.0 19.8 166 1-168 33-215 (215)
18 3k5r_A Cadherin 13; mouse, str 100.0 4.1E-35 1.4E-39 225.0 20.0 166 1-168 33-218 (218)
19 3ppe_A Vascular endothelial ca 100.0 1.6E-34 5.5E-39 219.3 22.6 160 3-168 34-203 (203)
20 3lnd_A CDH6 protein, cadherin 100.0 2.4E-35 8.3E-40 224.6 15.0 163 1-168 34-207 (207)
21 3ubf_A Neural-cadherin; cell a 100.0 3.1E-32 1.1E-36 219.9 21.5 164 2-173 141-316 (316)
22 2a62_A Cadherin-8; extracellul 100.0 2.9E-32 9.9E-37 220.3 16.3 162 1-167 143-322 (322)
23 4apx_B Protocadherin-15, otoca 100.0 5.1E-29 1.7E-33 193.3 18.4 164 1-168 52-237 (242)
24 3mvs_A Cadherin-23, otocadheri 100.0 1.1E-28 3.9E-33 188.1 11.8 138 66-211 3-144 (210)
25 2yst_A Protocadherin-7; BH-PCD 100.0 5.5E-29 1.9E-33 173.3 8.5 114 59-174 2-119 (119)
26 2qvi_A Cadherin-2; beta barrel 99.9 1.4E-26 4.8E-31 177.0 14.9 132 77-211 6-145 (215)
27 2a4e_A Cadherin-11; dimer, cal 99.9 3.3E-26 1.1E-30 174.8 16.5 132 75-210 5-144 (215)
28 3qrb_A Cadherin-1; cell adhesi 99.9 7E-26 2.4E-30 173.0 15.1 130 76-210 5-145 (213)
29 3ppe_A Vascular endothelial ca 99.9 2.4E-25 8.2E-30 168.7 15.3 129 76-210 5-141 (203)
30 2ee0_A Protocadherin-9; Ca dom 99.9 2.4E-26 8.3E-31 158.6 7.8 108 59-170 2-114 (114)
31 2x2u_A Proto-oncogene tyrosine 99.9 1.2E-27 4.2E-32 186.4 1.2 139 70-211 2-174 (246)
32 3k5r_A Cadherin 13; mouse, str 99.9 2.1E-25 7.2E-30 170.9 11.8 128 77-210 7-144 (218)
33 3lnd_A CDH6 protein, cadherin 99.9 4.7E-26 1.6E-30 173.2 7.7 130 77-210 6-143 (207)
34 2yqg_A Desmoglein-2, HDGC; cad 99.9 1E-23 3.5E-28 147.2 5.5 112 64-178 5-122 (123)
35 4apx_B Protocadherin-15, otoca 99.8 3E-20 1E-24 144.0 11.8 136 74-211 20-167 (242)
36 1ncg_A N-cadherin; cell adhesi 99.8 1.7E-20 6E-25 128.3 8.9 97 75-176 6-110 (110)
37 1wyj_A Protocadherin beta 14; 99.8 6.6E-20 2.3E-24 128.0 0.7 104 74-184 11-123 (125)
38 1zvn_A Mn-cadherin; strand dim 99.7 3E-17 1E-21 109.8 10.8 89 76-168 6-99 (99)
39 1zxk_A Cadherin-8; strand dime 99.7 4.1E-17 1.4E-21 109.0 10.3 89 76-168 5-98 (98)
40 1ncg_A N-cadherin; cell adhesi 99.7 1.6E-17 5.5E-22 113.5 8.4 71 1-71 35-110 (110)
41 2yqg_A Desmoglein-2, HDGC; cad 99.7 2E-17 6.7E-22 115.3 8.8 73 1-73 45-122 (123)
42 3k6d_A T-cadherin; cell adhesi 99.7 2.1E-16 7.2E-21 105.8 9.4 87 76-168 5-99 (99)
43 3k6i_A T-cadherin; cell adhesi 99.7 1.1E-15 3.7E-20 102.3 11.6 86 77-168 6-99 (99)
44 3k6f_A T-cadherin; cell adhesi 99.7 7.2E-16 2.4E-20 103.4 10.6 86 77-168 7-100 (100)
45 1wyj_A Protocadherin beta 14; 99.7 2.5E-17 8.4E-22 114.9 2.4 75 3-79 45-123 (125)
46 2omz_B Epithelial-cadherin; le 99.6 1.1E-15 3.6E-20 103.4 9.3 88 77-169 10-105 (105)
47 2yst_A Protocadherin-7; BH-PCD 99.6 7.2E-16 2.5E-20 106.7 6.9 69 1-69 48-119 (119)
48 1zxk_A Cadherin-8; strand dime 99.5 1.6E-13 5.5E-18 91.4 9.0 62 1-63 34-98 (98)
49 2omz_B Epithelial-cadherin; le 99.5 1.6E-13 5.6E-18 92.6 8.6 64 1-64 37-105 (105)
50 1zvn_A Mn-cadherin; strand dim 99.5 2.8E-13 9.6E-18 90.4 9.2 62 1-63 35-99 (99)
51 2ee0_A Protocadherin-9; Ca dom 99.5 1.6E-13 5.6E-18 94.1 7.5 65 1-65 48-114 (114)
52 3k6i_A T-cadherin; cell adhesi 99.4 7.5E-13 2.6E-17 88.4 9.5 63 1-63 32-99 (99)
53 3k6d_A T-cadherin; cell adhesi 99.4 6.4E-13 2.2E-17 88.7 9.1 63 1-63 32-99 (99)
54 3k6f_A T-cadherin; cell adhesi 99.4 7.6E-13 2.6E-17 88.5 8.8 63 1-63 33-100 (100)
55 1wuz_A Pcdha4 protein, CNR-EC1 99.4 5E-14 1.7E-18 94.8 2.9 93 74-172 3-103 (103)
56 1wuz_A Pcdha4 protein, CNR-EC1 99.2 2.3E-11 7.8E-16 81.7 4.9 64 2-67 36-103 (103)
57 3pdd_A Glycoside hydrolase, fa 93.8 1.4 4.8E-05 32.1 14.9 117 35-168 59-180 (190)
58 1op4_A Neural-cadherin; beta s 92.4 1.6 5.3E-05 30.9 9.4 81 66-154 31-112 (159)
59 2kpn_A Bacillolysin; solution 92.1 0.37 1.2E-05 31.5 5.4 55 16-70 34-92 (103)
60 2yrl_A KIAA1837 protein; PKD d 90.4 0.84 2.9E-05 29.6 6.0 58 105-170 39-97 (102)
61 3rb5_A Na/Ca exchange protein; 89.2 5.1 0.00017 31.4 10.6 125 33-168 87-212 (298)
62 3rb5_A Na/Ca exchange protein; 88.8 7.2 0.00025 30.5 12.5 127 65-199 6-146 (298)
63 2yrl_A KIAA1837 protein; PKD d 88.7 1.1 3.9E-05 29.0 5.6 32 35-66 67-98 (102)
64 2yhg_A SDE_182CT, cellulose-bi 88.2 7.8 0.00027 32.0 11.3 65 97-166 366-436 (437)
65 3ott_A Two-component system se 86.4 2.3 7.9E-05 37.4 7.9 77 92-178 677-753 (758)
66 2y72_A Collagenase, collagenas 84.9 2.3 8E-05 26.3 5.3 31 32-62 54-84 (85)
67 4a2l_A BT_4663, two-component 84.7 8.8 0.0003 33.9 10.9 78 91-179 711-788 (795)
68 2kpn_A Bacillolysin; solution 78.7 4.9 0.00017 26.1 5.2 34 136-171 53-88 (103)
69 1u2c_A Dystroglycan; IG-like d 75.9 21 0.00073 26.9 8.6 68 106-175 33-106 (246)
70 2y72_A Collagenase, collagenas 74.8 6.1 0.00021 24.3 4.8 30 136-167 55-84 (85)
71 2yhg_A SDE_182CT, cellulose-bi 74.2 14 0.00047 30.6 7.8 59 2-61 372-436 (437)
72 3v9f_A Two-component system se 72.4 10 0.00035 33.4 7.3 60 101-166 715-774 (781)
73 3ead_A Na/Ca exchange protein; 69.7 23 0.00078 24.0 9.6 45 67-114 3-47 (137)
74 2e7m_A Protein KIAA0319; PKD d 69.7 6.8 0.00023 25.9 4.1 57 105-168 48-105 (113)
75 3pe9_A Fibronectin(III)-like m 65.6 12 0.00042 23.9 4.7 72 88-169 18-89 (98)
76 3pdd_A Glycoside hydrolase, fa 65.6 35 0.0012 24.5 9.2 59 138-204 59-121 (190)
77 3us9_A Sodium/calcium exchange 61.1 56 0.0019 25.4 12.3 56 55-114 128-183 (295)
78 3lpw_A A77-A78 domain from tit 60.7 38 0.0013 23.3 8.3 19 136-154 165-183 (197)
79 3pe9_A Fibronectin(III)-like m 58.8 18 0.00062 23.1 4.6 28 36-63 60-88 (98)
80 1op4_A Neural-cadherin; beta s 54.4 53 0.0018 23.0 7.4 44 15-60 78-122 (159)
81 3ott_A Two-component system se 53.4 34 0.0012 29.9 7.0 61 2-73 691-753 (758)
82 2yrz_A Integrin beta-4; GP150, 51.6 42 0.0014 21.1 6.1 20 136-155 80-99 (118)
83 1qr4_A Protein (tenascin); fib 45.3 71 0.0024 21.8 15.8 19 136-154 154-172 (186)
84 3gin_A Sodium/calcium exchange 44.3 78 0.0027 22.0 7.7 58 55-115 10-67 (160)
85 2c4x_A Endoglucanase, ctcel9D- 42.2 45 0.0015 25.4 5.2 34 31-64 63-96 (260)
86 1u2c_A Dystroglycan; IG-like d 42.0 1.1E+02 0.0037 23.1 8.0 63 2-66 33-104 (246)
87 1cfb_A Drosophila neuroglian; 38.1 76 0.0026 22.1 5.8 19 136-154 171-189 (205)
88 2gee_A Hypothetical protein; f 37.9 1E+02 0.0035 21.5 16.8 106 34-155 85-194 (203)
89 2dmk_A Midline 2 isoform 2; mi 34.3 63 0.0021 20.9 4.5 20 136-155 87-106 (127)
90 4a2l_A BT_4663, two-component 32.9 1.3E+02 0.0045 26.3 7.5 33 36-73 753-787 (795)
91 2ibg_A CG9211-PA, GH03927P; IH 32.8 1.2E+02 0.0042 21.0 9.9 19 136-154 181-199 (214)
92 1i1r_A GP130, interleukin-6 re 31.3 1.6E+02 0.0056 21.9 10.0 19 136-154 267-285 (303)
93 2jtd_A Myomesin-1, skelemin; i 30.5 1.3E+02 0.0043 20.4 9.7 77 69-152 37-119 (142)
94 2dju_A Receptor-type tyrosine- 30.5 92 0.0031 18.8 5.7 20 136-155 68-87 (106)
95 2ptt_B Natural killer cell rec 30.4 1.2E+02 0.0039 19.9 5.8 48 13-63 65-112 (112)
96 1f97_A Junction adhesion molec 29.2 1.4E+02 0.0047 20.4 10.3 139 15-170 59-209 (212)
97 2c4x_A Endoglucanase, ctcel9D- 27.8 81 0.0028 23.9 4.5 32 136-169 65-96 (260)
98 3qht_C Monobody YSMB-1; fibron 27.0 1.1E+02 0.0037 18.5 6.5 19 136-154 65-83 (97)
99 2ee3_A Collagen alpha-1(XX) ch 26.0 1.3E+02 0.0043 19.0 8.2 20 136-155 67-86 (108)
100 2w1n_A O-GLCNACASE NAGJ; hexos 25.7 2.1E+02 0.0072 21.4 9.4 28 136-164 207-234 (238)
101 2lv4_A Putative outer membrane 25.7 24 0.00082 23.6 1.0 30 144-173 50-79 (146)
102 3b83_A Ten-D3; beta sheet, com 25.5 1.2E+02 0.004 18.4 7.7 20 136-155 62-81 (100)
103 1bpv_A Titin, A71, connectin; 24.8 94 0.0032 19.6 3.9 19 136-154 75-93 (112)
104 3v9f_A Two-component system se 24.3 1.6E+02 0.0055 25.7 6.5 27 36-62 747-775 (781)
105 3v6o_A Leptin receptor; recept 24.2 1.9E+02 0.0064 20.3 7.9 29 36-64 79-107 (206)
106 1bqu_A Protein (GP130); cytoki 23.9 1.8E+02 0.0063 20.1 10.3 19 136-154 171-189 (215)
107 1nbq_A JAM, junctional adhesio 22.0 1.7E+02 0.0057 19.9 5.2 130 23-167 68-208 (209)
108 1uem_A KIAA1568 protein; immun 21.6 71 0.0024 19.8 2.8 19 136-154 79-97 (117)
109 2kbg_A N-CAM 2, neural cell ad 21.3 1.7E+02 0.0058 18.7 4.7 21 136-156 71-91 (114)
110 2e7h_A Ephrin type-B receptor 20.9 1.5E+02 0.0052 18.1 4.5 19 136-154 71-89 (109)
111 2qvk_A CBD2, sodium/calcium ex 20.5 2.4E+02 0.0083 20.2 8.3 78 65-152 2-82 (192)
112 1fnf_A Fibronectin; RGD, extra 20.0 2.9E+02 0.01 20.9 15.1 20 136-155 336-355 (368)
113 3t1w_A Four-domain fibronectin 20.0 3E+02 0.01 21.0 16.9 106 34-154 249-356 (375)
No 1
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=100.00 E-value=1.5e-45 Score=298.08 Aligned_cols=206 Identities=26% Similarity=0.421 Sum_probs=188.8
Q ss_pred CeEEEEcCCCCCcCceEEeCCceEEEECCcCCcCCCCeEEEEEEEEeCCC---CceEEEEEEEEeecCCCCCccCCCceE
Q psy11061 1 MVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRGG---LSTTAMVRIQITDVNDNEPIFNPVEYN 77 (212)
Q Consensus 1 ~i~Y~i~~~~~~~~~F~id~~tg~i~~~~~lD~E~~~~~~l~i~a~d~~~---~~~~~~v~i~V~d~nd~~P~f~~~~~~ 77 (212)
+|+|+|..+. .+.+|.|++.+|.|+++++||||....|.|.|+|.|.++ ++..+.++|.|.|+|||+|.|....|.
T Consensus 34 ~i~Y~l~~~~-~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~ 112 (322)
T 2a62_A 34 KIKYILSGDG-AGTIFQINDITGDIHAIKRLDREEKAEYTLTAQAVDFETNKPLEPPSEFIIKVQDINDNAPEFLNGPYH 112 (322)
T ss_dssp CCEEEEEETT-BTTTEEEETTTTEEEECSCCCTTTCSBCCEEEEEECTTTCSEEEEEEEECEECCCCSCSCBCCSSSEEE
T ss_pred EEEEEEECCC-CCCcEEEeCCcCEEEEeccCCcccccEEEEEEEEEECCCCCcccceEEEEEEEEecCCCCCccCCCceE
Confidence 4799997653 347999999999999999999999999999999999864 567889999999999999999999999
Q ss_pred EEEecCCCCCcEEEEEEEEeCCC---CCCceEEEEEEcCCCCCcEEEeCCccEEEEe-eecCCC--CCCeEEEEEEEEEC
Q psy11061 78 VSLRDDIQTTTAFAVVLATDRDS---DRFGTISYKIVTGKDANLFRIDRSSGELFVT-RGNFLS--RSNSYHINVSAMDG 151 (212)
Q Consensus 78 ~~v~e~~~~g~~v~~~~a~D~D~---~~~~~i~y~i~~~~~~~~F~id~~~G~i~~~-~~~~ld--~~~~~~l~v~a~D~ 151 (212)
+.|+|+.++|+.++++.|+|+|. |.|+.+.|+|..+. ++|.|++.+|.|++. .. || ....|.|.|.|+|.
T Consensus 113 ~~v~E~~~~gt~v~~v~A~D~D~~~~G~n~~i~Y~i~~~~--~~F~Id~~tG~i~~~~~~--LD~E~~~~y~l~V~a~D~ 188 (322)
T 2a62_A 113 ATVPEMSILGTSVTNVTATDADDPVYGNSAKLVYSILEGQ--PYFSIEPETAIIKTALPN--MDREAKEEYLVVIQAKDM 188 (322)
T ss_dssp EEECSSCCTTCBCCCCCCCBCSCSSSTTSSCEEEEEEECT--TTEEECTTTCCEEECSSC--CCGGGCSEEEEEEEEEES
T ss_pred EEEeCCCCCCCEEEEEEEEeCCCCCCCccEEEEEEEccCC--CCEEEecCCCEEEecccC--CCcccCCeEEEEEEEEEC
Confidence 99999999999999999999996 67889999998764 689999999999988 77 88 78899999999999
Q ss_pred CCCC--eeeeEEEEEEEeeCCCCCCeEecCceEEEEeCCCCCCeEEEEEEEEeCCCCCCeec
Q psy11061 152 GGNK--CSQDAQVNINIINSHMPIPLFQQSTYSFVVPEDVFKNSIVGTIKAATSDSGKFTEF 211 (212)
Q Consensus 152 ~~~~--~~~~~~v~I~v~d~nd~~P~f~~~~~~~~v~e~~~~g~~v~~v~a~D~D~~~~~~~ 211 (212)
++++ ++++++|+|+|.|+|||+|.|.+..|.+.|.|+.++|+.|++|.|+|+|.|.++++
T Consensus 189 g~p~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~g~n~~i 250 (322)
T 2a62_A 189 GGHSGGLSGTTTLTVTLTDVNDNPPKFAQSLYHFSVPEDVVLGTAIGRVKANDQDIGENAQS 250 (322)
T ss_dssp CSSSSCCBCCEEEEEEECCCCCCCCCCSCSEEEEEECSCCSSCCEEEEEECCCSSCGGGTCC
T ss_pred CCCCCCceeEEEEEEEEEecCCCCCeecCCCceeEeECCCCCCcEEEEEEEEeCCCCCCceE
Confidence 8874 67899999999999999999999999999999999999999999999999987643
No 2
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=100.00 E-value=2.3e-42 Score=297.44 Aligned_cols=207 Identities=27% Similarity=0.394 Sum_probs=188.9
Q ss_pred CeEEEEcCCC---CCcCceEEeCCceEEEECCcCCcCCCCeEEEEEEEEeCCC--CceEEEEEEEEeecCCCCCccCCCc
Q psy11061 1 MVNYTLGESP---SRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRGG--LSTTAMVRIQITDVNDNEPIFNPVE 75 (212)
Q Consensus 1 ~i~Y~i~~~~---~~~~~F~id~~tg~i~~~~~lD~E~~~~~~l~i~a~d~~~--~~~~~~v~i~V~d~nd~~P~f~~~~ 75 (212)
+|+|+|..+. .+.++|.|++.+|.|+++++||||....|.|.|+|.|.++ ++..+.++|.|.|+|||+|.|....
T Consensus 39 ~v~Ysi~~~~~~~~~~~~F~Id~~tG~l~~~~~LDrE~~~~y~l~v~A~D~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~ 118 (546)
T 1l3w_A 39 KVYYSITGQGADNPPQGVFRIEWETGWMLVTRPLDREEYDKYVLSSHAVSENGSPVEEPMEITINVIDQNDNRPKFTQDV 118 (546)
T ss_dssp CEEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEESSSCBCSCCEEEEEEEECCSCCCCEESSSC
T ss_pred eEEEEEECCCCCCCCCceEEEeCCccEEEECCcCCcccCceEEEEEEEEeCCCCcccceEEEEEEEEecccCcCEecCce
Confidence 5899996543 2357999999999999999999999999999999999875 4677999999999999999999999
Q ss_pred eEEEEecCCCCCcEEEEEEEEeCCCC---CCceEEEEEEcCC----CCCcEEEeCCccEEEEe-eecCCC--CCCeEEEE
Q psy11061 76 YNVSLRDDIQTTTAFAVVLATDRDSD---RFGTISYKIVTGK----DANLFRIDRSSGELFVT-RGNFLS--RSNSYHIN 145 (212)
Q Consensus 76 ~~~~v~e~~~~g~~v~~~~a~D~D~~---~~~~i~y~i~~~~----~~~~F~id~~~G~i~~~-~~~~ld--~~~~~~l~ 145 (212)
|.+.|.|+.++|+.++++.|+|+|.+ .|+.++|+|..+. ..++|.|++.+|.|++. +. || ....|.|.
T Consensus 119 y~~~V~En~~~gt~v~~v~A~D~D~g~~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~~--LD~E~~~~y~l~ 196 (546)
T 1l3w_A 119 FRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIPNLFTINRETGVISLIGTG--LDREKFPEYTLT 196 (546)
T ss_dssp EEEEEETTCCSSEEEEECCEECCSCCSSSSTTCCEEEEEEESSCCSCSCSEEECTTTCEEEECSCC--CCTTTCCEEEEE
T ss_pred eEEEEECCCCCCCEEEEEEEEcCCCCCCCCCCEEEEEEeCCCCCcccCCcEEEeCCCceEEEeccC--CCcccCceEEEE
Confidence 99999999999999999999999998 6889999998765 35799999999999985 67 77 78999999
Q ss_pred EEEEECCCCCeeeeEEEEEEEeeCCCCCCeEecCceEEEEeCCCCCCeEEEEEEEEeCC--CCCCee
Q psy11061 146 VSAMDGGGNKCSQDAQVNINIINSHMPIPLFQQSTYSFVVPEDVFKNSIVGTIKAATSD--SGKFTE 210 (212)
Q Consensus 146 v~a~D~~~~~~~~~~~v~I~v~d~nd~~P~f~~~~~~~~v~e~~~~g~~v~~v~a~D~D--~~~~~~ 210 (212)
|.|+|.+++.++++++|.|+|.|+|||+|.|....|.+.|.|+ ++|+.|++|.|+|+| .|.+++
T Consensus 197 V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En-~~gt~v~~v~A~D~D~~~g~n~~ 262 (546)
T 1l3w_A 197 VQATDLEGAGLSVEGKAIIQITDANDNAPIFDPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQ 262 (546)
T ss_dssp EEEEHHHHTSCEEECCEEEEEECCCCCCCCBSCSEEEEEEESS-SCCCEEEEECBCCCSCTTSTTSC
T ss_pred EEEEECCCCCcceEEEEEEEEeecCCCCCccccccceEEEEeC-CCCCEEEEEEEEeCCCCCCCCcE
Confidence 9999999888889999999999999999999999999999999 999999999999999 666643
No 3
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=100.00 E-value=6.2e-42 Score=295.61 Aligned_cols=204 Identities=25% Similarity=0.397 Sum_probs=185.7
Q ss_pred CeEEEEcCCC---CCcCceEEeCCceEEEECCcCCcCCCCeEEEEEEEEeCCC--CceEEEEEEEEeecCCCCCccCCCc
Q psy11061 1 MVNYTLGESP---SRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRGG--LSTTAMVRIQITDVNDNEPIFNPVE 75 (212)
Q Consensus 1 ~i~Y~i~~~~---~~~~~F~id~~tg~i~~~~~lD~E~~~~~~l~i~a~d~~~--~~~~~~v~i~V~d~nd~~P~f~~~~ 75 (212)
+|+|+|.++. .+.++|.|++.+|.|++.++||||....|.|.++|.|.++ ++.++.++|.|.|+|||+|.|....
T Consensus 33 ~i~Ysi~~~~~~~~~~~~F~id~~tG~l~~~~~LDrE~~~~y~l~v~a~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~ 112 (559)
T 3q2w_A 33 SLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAVDINGNQVENPIDIVINVIDMNDNRPEFLHQV 112 (559)
T ss_dssp CEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTSCEEEEEEEEEEEEECCCCCCCEESCSE
T ss_pred EEEEEEECCCCCCCCCceEEEeCCceEEEECCccCCCCCceEEEEEEEEECCCCccceeEEEEEEEEeCCCCCCccCCCe
Confidence 5899996543 2347999999999999999999999999999999999876 5677899999999999999999999
Q ss_pred eEEEEecCCCCCcEEEEEEEEeCCCC--CCceEEEEEEcCCCC----CcEEEeCCccEEEEee-ecCCC--CCCeEEEEE
Q psy11061 76 YNVSLRDDIQTTTAFAVVLATDRDSD--RFGTISYKIVTGKDA----NLFRIDRSSGELFVTR-GNFLS--RSNSYHINV 146 (212)
Q Consensus 76 ~~~~v~e~~~~g~~v~~~~a~D~D~~--~~~~i~y~i~~~~~~----~~F~id~~~G~i~~~~-~~~ld--~~~~~~l~v 146 (212)
|.+.|+|+.++|+.++++.|+|+|.+ .|+.++|+|..+.+. ++|.|++.+|.|++.. . || ....|.|.|
T Consensus 113 y~~~V~En~~~Gt~v~~v~A~D~D~g~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~~--LD~E~~~~y~l~V 190 (559)
T 3q2w_A 113 WNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRILSQAPSTPSPNMFTINNETGDIITVAAG--LDREKVQQYTLII 190 (559)
T ss_dssp EEEEEETTCCTTCEEEECCEECSSCTTSGGGCCEEEEEEEESCCSCTTCEEECTTTCEEEECCSC--CCTTTCCEEEEEE
T ss_pred eEEEEeCCCCCCcEEEEEEEEcCCCCCCCceEEEEEEecCCCCCCCcceEEEeCCceEEEEEecc--CCcccCCEEEEEE
Confidence 99999999999999999999999987 588999999876442 6899999999999887 7 87 788999999
Q ss_pred EEEECCC---CCeeeeEEEEEEEeeCCCCCCeEecCceEEEEeCCCCCCeEEEEEEEEeCCCCC
Q psy11061 147 SAMDGGG---NKCSQDAQVNINIINSHMPIPLFQQSTYSFVVPEDVFKNSIVGTIKAATSDSGK 207 (212)
Q Consensus 147 ~a~D~~~---~~~~~~~~v~I~v~d~nd~~P~f~~~~~~~~v~e~~~~g~~v~~v~a~D~D~~~ 207 (212)
+|+|+++ +.++++++|.|+|.|+|||+|+|....|.+.|.|+. +|+.|+++.|+|+|.|.
T Consensus 191 ~A~D~~g~p~~~~s~t~~v~I~V~DvNDn~P~f~~~~y~~~V~En~-~g~~v~~v~a~D~D~~~ 253 (559)
T 3q2w_A 191 QATDMEGNPTYGLSNTATAVITVTDVNDNPPEFTAMTFYGEVPENR-VDVIVANLTVTDKDQPH 253 (559)
T ss_dssp EEEHHHHCTTTCCEEEEEEEEEEECCSCSCCEESSSEEEEEEESSC-SSEEEEEEEEECCSCTT
T ss_pred EEEECCCCCCCCccceEEEEEEEEeCCCCCCccccccceeEecCCC-CCcEEEEEEEEcCCCCC
Confidence 9999865 347889999999999999999999999999999997 89999999999999986
No 4
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=100.00 E-value=3.8e-42 Score=296.44 Aligned_cols=207 Identities=28% Similarity=0.388 Sum_probs=189.7
Q ss_pred CeEEEEcCCC---CCcCceEEeCCceEEEECCcCCcCCCCeEEEEEEEEeCCC--CceEEEEEEEEeecCCCCCccCCCc
Q psy11061 1 MVNYTLGESP---SRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRGG--LSTTAMVRIQITDVNDNEPIFNPVE 75 (212)
Q Consensus 1 ~i~Y~i~~~~---~~~~~F~id~~tg~i~~~~~lD~E~~~~~~l~i~a~d~~~--~~~~~~v~i~V~d~nd~~P~f~~~~ 75 (212)
+|+|+|.++. ++.++|.|++.+|.|+++++||||....|.|.+.|.|.++ ++.++.++|.|.|+|||+|.|....
T Consensus 33 ~v~Ysi~~~~~~~~~~~~F~Id~~tG~l~~~~~LDrE~~~~y~l~v~a~d~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~ 112 (550)
T 3q2v_A 33 KVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEV 112 (550)
T ss_dssp CEEEEEESBTTTBSSCSSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTSCBCSCCEEEEEEEECCSCCCCCBSCSE
T ss_pred eEEEEEECCCCCCCCCceEEEeCCceEEEECCccCcccCCeeEEEEEEEeCCCCcccceEEEEEEEEecCCCCCccCCCc
Confidence 5899996532 3457999999999999999999999999999999999875 5678899999999999999999999
Q ss_pred eEEEEecCCCCCcEEEEEEEEeCCCC---CCceEEEEEEcCC----CCCcEEEeCCccEEEEe-eecCCC--CCCeEEEE
Q psy11061 76 YNVSLRDDIQTTTAFAVVLATDRDSD---RFGTISYKIVTGK----DANLFRIDRSSGELFVT-RGNFLS--RSNSYHIN 145 (212)
Q Consensus 76 ~~~~v~e~~~~g~~v~~~~a~D~D~~---~~~~i~y~i~~~~----~~~~F~id~~~G~i~~~-~~~~ld--~~~~~~l~ 145 (212)
|.+.|.|+.++|+.++++.|+|+|.+ .|+.+.|+|..+. ..++|.|++.+|.|++. +. || ....|.|.
T Consensus 113 y~~~V~E~~~~Gt~v~~v~A~D~D~g~~~~N~~i~Ysi~~~~~~~~~~~~F~id~~tG~i~~~~~~--LDrE~~~~y~l~ 190 (550)
T 3q2v_A 113 FEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTSG--LDRESYPTYTLV 190 (550)
T ss_dssp EEEEEETTCCTTCEEEECCBCCCSCTTTCGGGCCEEEEEEEESCCSSSCSEEECTTTCEEEECSSC--CCTTTCSEEEEE
T ss_pred eEEEEeCCCCCCCEEEEEEEEeCCCCCCCcceEEEEEEecCCCCCCcCCceEEcCCCeEEEEccCC--CCcccCcEEEEE
Confidence 99999999999999999999999998 6889999998764 34699999999999874 67 77 88999999
Q ss_pred EEEEECCCCCeeeeEEEEEEEeeCCCCCCeEecCceEEEEeCCCCCCeEEEEEEEEeCCCCCCee
Q psy11061 146 VSAMDGGGNKCSQDAQVNINIINSHMPIPLFQQSTYSFVVPEDVFKNSIVGTIKAATSDSGKFTE 210 (212)
Q Consensus 146 v~a~D~~~~~~~~~~~v~I~v~d~nd~~P~f~~~~~~~~v~e~~~~g~~v~~v~a~D~D~~~~~~ 210 (212)
|+|+|++++.++++++|+|+|.|+|||+|+|.+..|.+.|.|+ ++|+.|++|.|+|+|.|.++.
T Consensus 191 V~A~D~g~~~~s~t~~v~I~V~DvNDn~P~F~~~~y~~~V~En-~~g~~v~~v~a~D~D~~~n~~ 254 (550)
T 3q2v_A 191 VQAADLQGEGLSTTAKAVITVKDINDNAPVFNPSTYQGQVPEN-EVNARIATLKVTDDDAPNTPA 254 (550)
T ss_dssp EEEESGGGTSCCCEEEEEEEEECCSCSCCEESSSEEEEEEESS-CSSCCCEEECEECCSCTTSTT
T ss_pred EEEEcCCCCCeeEEEEEEEEecccCCCCCEEecceeEEEEecC-CCCCEEEEEEEEECCCCCCCc
Confidence 9999998888889999999999999999999999999999999 999999999999999998753
No 5
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=100.00 E-value=7e-41 Score=270.53 Aligned_cols=200 Identities=20% Similarity=0.301 Sum_probs=173.2
Q ss_pred eEEEEcCCCCCcCceEEeCCceEEEECCcCCcCCC-----CeEEEEEEEEeCC---CCceEEEEEEEEeecCCCCCccCC
Q psy11061 2 VNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESR-----SSYEFPVVATDRG---GLSTTAMVRIQITDVNDNEPIFNP 73 (212)
Q Consensus 2 i~Y~i~~~~~~~~~F~id~~tg~i~~~~~lD~E~~-----~~~~l~i~a~d~~---~~~~~~~v~i~V~d~nd~~P~f~~ 73 (212)
++|+|..+. .+|.|++ +|.|+++++||||.. ..|.|.++|.|.+ +++..+.++|.|.|+|||+|.|..
T Consensus 33 ~~f~i~~~~---~~F~i~~-tG~l~~~~~LD~E~~~~~~~~~~~l~v~a~d~~~~~~~s~~~~v~I~V~DvNDn~P~F~~ 108 (316)
T 3ubf_A 33 ETFKIRDDN---PWVTVET-NGAVRVKKKWDYEELGPEKTIDFWVIITNMGHNAGIKYTDNQRVIILVKDVNDEPPYFIN 108 (316)
T ss_dssp CEEEESSCC---SSEEECT-TSEEEESSCCCGGGSCTTCEEEEEEEEEC-------CCCEEEEEEEEEECTTCCCCEECC
T ss_pred ceEEEeCCC---CeEEECC-CeEEEECCccChhhcccccceEEEEEEEEcCCCCCCcccceEEEEEEEEECCCCCCccCC
Confidence 456666554 6899999 999999999999984 4788888898877 358899999999999999999998
Q ss_pred Cc--eEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEcCCCCCcEEEeCCccEEEEeeecCCC--CCCeEEEEEEEE
Q psy11061 74 VE--YNVSLRDDIQTTTAFAVVLATDRDSDRFGTISYKIVTGKDANLFRIDRSSGELFVTRGNFLS--RSNSYHINVSAM 149 (212)
Q Consensus 74 ~~--~~~~v~e~~~~g~~v~~~~a~D~D~~~~~~i~y~i~~~~~~~~F~id~~~G~i~~~~~~~ld--~~~~~~l~v~a~ 149 (212)
.. |.+.|.|+.++|+.++++.|+|+|.+.+ +.|+|..++..++|.|++.+|.|++.+. || ....|.|.|.|+
T Consensus 109 ~~~~y~~~v~En~~~gt~v~~v~A~D~D~g~n--i~Y~i~~~~~~~~F~Id~~tG~i~~~~~--lD~e~~~~y~l~V~A~ 184 (316)
T 3ubf_A 109 RPLPMQAVVQLNAPPNTPVFTLQARDPDTDHN--IHYFIVRDRTGGRFEVDERSGVVRTRGT--DLFQLDMEYVLYVKAE 184 (316)
T ss_dssp SSSSEEEEECTTCCTTCEEEECCEECSSTTCC--EEEEEEEEESSSCEEECTTTCEEEECSS--CCCCTTCEEEEEEEEE
T ss_pred CCCCEEEEEeCCCCCCCEEEEEEEECCCCCCc--eEEEEEeCCCCCEEEEECCccEEEECCc--CCcccCcEEEEEEEEE
Confidence 76 8999999999999999999999999876 9999998777789999999999999999 77 788899999999
Q ss_pred ECCC----CCeeeeEEEEEEEeeCCCCCCeEecCceEEEEeCCCCCCeEEEEEEEEeCCCCCCeec
Q psy11061 150 DGGG----NKCSQDAQVNINIINSHMPIPLFQQSTYSFVVPEDVFKNSIVGTIKAATSDSGKFTEF 211 (212)
Q Consensus 150 D~~~----~~~~~~~~v~I~v~d~nd~~P~f~~~~~~~~v~e~~~~g~~v~~v~a~D~D~~~~~~~ 211 (212)
|+++ +..++++.|+|.|.| |||+|.|.+..|.+.|.|+.++|+.|++|.|+|+|- ...+|
T Consensus 185 D~g~~~~~~~~~~~~~v~I~V~d-nDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~Dn-~~i~Y 248 (316)
T 3ubf_A 185 DQNGKVDDRRFQSTPEERLSIVG-GKRAPQFYMPSYEAEIPENQKKDSDIISIKAKSFAD-REIRY 248 (316)
T ss_dssp ESCC-------CBCCCEEEEEEE-SCCCCEESSSSEEEEEETTCCTTCEEEECCEECTTC-CCEEE
T ss_pred eCCCCCCCccccceEEEEEEEEc-CCCCCEEcCCCceEEEeCCCCCCCEEEEEEEEeCCC-CEEEE
Confidence 9985 345678889999999 999999999999999999999999999999999993 33444
No 6
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=100.00 E-value=6.5e-41 Score=301.13 Aligned_cols=206 Identities=27% Similarity=0.393 Sum_probs=188.5
Q ss_pred CeEEEEcCCC---CCcCceEEeCCceEEEECCcCCcCCCCeEEEEEEEEeCCC--CceEEEEEEEEeecCCCCCccCCCc
Q psy11061 1 MVNYTLGESP---SRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRGG--LSTTAMVRIQITDVNDNEPIFNPVE 75 (212)
Q Consensus 1 ~i~Y~i~~~~---~~~~~F~id~~tg~i~~~~~lD~E~~~~~~l~i~a~d~~~--~~~~~~v~i~V~d~nd~~P~f~~~~ 75 (212)
+|+|+|..+. .+.++|.|++.+|.|+++++||||....|.|.|+|.|.++ ++..+.++|.|.|+|||+|.|....
T Consensus 188 ~v~Ysi~~~~~~~~~~~~F~Id~~tG~l~~~~~LDrE~~~~y~l~v~A~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~ 267 (880)
T 1q55_A 188 KVYYSITGQGADNPPQGVFRIEWETGWMLVTRPLDREEYDKYVLSSHAVSENGSPVEEPMEITINVIDQNDNRPKFTQDV 267 (880)
T ss_dssp CEEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEESSSCBCSCCEEEEEEEECCSCCCCEESSSC
T ss_pred eEEEEEECCCCCCCcCCEEEEECCcCEEEECCccCccccCccEEEEEEEECCCCceeeeEEEEEEEEecCCCCCCccCCc
Confidence 4899996543 2347999999999999999999999999999999999875 5678999999999999999999999
Q ss_pred eEEEEecCCCCCcEEEEEEEEeCCCC---CCceEEEEEEcCC----CCCcEEEeCCccEEEEe-eecCCC--CCCeEEEE
Q psy11061 76 YNVSLRDDIQTTTAFAVVLATDRDSD---RFGTISYKIVTGK----DANLFRIDRSSGELFVT-RGNFLS--RSNSYHIN 145 (212)
Q Consensus 76 ~~~~v~e~~~~g~~v~~~~a~D~D~~---~~~~i~y~i~~~~----~~~~F~id~~~G~i~~~-~~~~ld--~~~~~~l~ 145 (212)
|.+.|+|+.++|+.++++.|+|+|.+ .|+.++|+|..+. ..++|.|++.+|.|++. .. || ....|.|.
T Consensus 268 y~~~V~En~~~Gt~V~~v~AtD~D~g~~~~N~~v~Ysi~~~~~~~~~~~~F~Id~~tG~I~~~~~~--LDrE~~~~y~l~ 345 (880)
T 1q55_A 268 FRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIPNLFTINRETGVISLIGTG--LDREKFPEYTLT 345 (880)
T ss_dssp EEEEEETTCCSSEEEEECCEECCSCCSSSSTTCCEEEEEEESSCCSCSCSEEECTTTCEEEECSCC--CCTTTCCEEEEE
T ss_pred EEEEEeCCCCCCceeEEEEEEcCCCCCCCcCcEEEEEEcCCCCCcccCCeEEEccCCccEEEeccc--CCHHHcceeEEE
Confidence 99999999999999999999999998 6889999998765 35799999999999985 57 77 78999999
Q ss_pred EEEEECCCCCeeeeEEEEEEEeeCCCCCCeEecCceEEEEeCCCCCCeEEEEEEEEeCC--CCCCe
Q psy11061 146 VSAMDGGGNKCSQDAQVNINIINSHMPIPLFQQSTYSFVVPEDVFKNSIVGTIKAATSD--SGKFT 209 (212)
Q Consensus 146 v~a~D~~~~~~~~~~~v~I~v~d~nd~~P~f~~~~~~~~v~e~~~~g~~v~~v~a~D~D--~~~~~ 209 (212)
|+|+|.+++..+++++|+|+|.|+|||+|+|.+..|.+.|.|+ ++|+.|++|.|+|+| .|.++
T Consensus 346 V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En-~~gt~V~~v~A~D~D~~~g~n~ 410 (880)
T 1q55_A 346 VQATDLEGAGLSVEGKAIIQITDANDNAPIFDPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAW 410 (880)
T ss_dssp EEEEHHHHTSCEEECCEEEEEECCCCCCCCBSCSEEEEEEESS-SCCCEEEEECBCCCSCTTSTTS
T ss_pred EEEEECCCCCccceeEEEEEEEeccCCCCCccccceEEEeecC-CCCcEEEEEEEECCCCCCCCCc
Confidence 9999999888889999999999999999999999999999999 999999999999999 66664
No 7
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=100.00 E-value=6.7e-39 Score=245.20 Aligned_cols=170 Identities=24% Similarity=0.394 Sum_probs=149.0
Q ss_pred CeEEEEcCCCCCcCceEEeCCceEEEECCcCCcCCCCeEEEEEEEEeCCC---CceEEEEEEEEeecCCCCCccCCCceE
Q psy11061 1 MVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRGG---LSTTAMVRIQITDVNDNEPIFNPVEYN 77 (212)
Q Consensus 1 ~i~Y~i~~~~~~~~~F~id~~tg~i~~~~~lD~E~~~~~~l~i~a~d~~~---~~~~~~v~i~V~d~nd~~P~f~~~~~~ 77 (212)
+|+|+|..+. ...+|.|++.+|.|+++++||||....|.|.|.|.|.++ ++..+.++|.|.|+|||+|.|....|.
T Consensus 35 ~i~Y~l~~~~-~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~ 113 (215)
T 2a4e_A 35 NIKYILSGEG-AGTIFVIDDKSGNIHATKTLDREERAQYTLMAQAVDRDTNRPLEPPSEFIVKVQDINDNPPEFLHEIYH 113 (215)
T ss_dssp CEEEEEEETT-BTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTTCCEEEEEEEEEEEEECCCCCCCEESSSSEE
T ss_pred eEEEEEECCC-CCCeEEEECCceEEEECCccCCccCCEEEEEEEEEECCCCCcccccEEEEEEEeeCCCCCCCccCCceE
Confidence 5899997653 347999999999999999999999999999999999874 567899999999999999999999999
Q ss_pred EEEecCCCCCcEEEEEEEEeCCC---CCCceEEEEEEcCCCCCcEEEeCCccEEEEe-eecCCC--CCCeEEEEEEEEEC
Q psy11061 78 VSLRDDIQTTTAFAVVLATDRDS---DRFGTISYKIVTGKDANLFRIDRSSGELFVT-RGNFLS--RSNSYHINVSAMDG 151 (212)
Q Consensus 78 ~~v~e~~~~g~~v~~~~a~D~D~---~~~~~i~y~i~~~~~~~~F~id~~~G~i~~~-~~~~ld--~~~~~~l~v~a~D~ 151 (212)
+.|+|+.+.|+.++++.|+|+|. |.|++++|+|..+. ++|.|++.+|.|++. +. || ....|.|.|.|+|.
T Consensus 114 ~~v~E~~~~Gt~v~~v~A~D~D~~~~G~n~~i~Y~i~~~~--~~F~Id~~tG~I~~~~~~--LD~E~~~~y~l~V~A~D~ 189 (215)
T 2a4e_A 114 ANVPERSNVGTSVIQVTASDADDPTYGNSAKLVYSILEGQ--PYFSVEAQTGIIRTALPN--MDREAKEEYHVVIQAKDM 189 (215)
T ss_dssp EEEETTCCTTCEEEECCEECSSCTTTCSSSCCEEEEEEST--TTEEECTTTCEEEECSSC--CCSSSCSEEEEEEEEETT
T ss_pred EEEECCCCCCCEEEEEEEEECCCCCCCCceEEEEEEeCCC--CcEEEeCCccEEEEcccC--CCcccCCEEEEEEEEEEC
Confidence 99999999999999999999997 77889999999764 589999999999998 77 87 78899999999999
Q ss_pred CCC--CeeeeEEEEEEEeeCCCCCCe
Q psy11061 152 GGN--KCSQDAQVNINIINSHMPIPL 175 (212)
Q Consensus 152 ~~~--~~~~~~~v~I~v~d~nd~~P~ 175 (212)
+++ .++++++|+|+|.|+|||+|+
T Consensus 190 g~~~~~~s~~~~v~I~V~DvNDn~P~ 215 (215)
T 2a4e_A 190 GGHMGGLSGTTKVTITLTDDYKDDDK 215 (215)
T ss_dssp TTCTTCCEEEEEEEEEEEC-------
T ss_pred CCCCCCceeEEEEEEEEEECCCCCCC
Confidence 876 478899999999999999995
No 8
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=100.00 E-value=5.6e-39 Score=268.49 Aligned_cols=198 Identities=23% Similarity=0.345 Sum_probs=176.8
Q ss_pred CeEEEEcCCCCCcCceEEeC--------CceEEEECCcCCcCCC---CeEEEEEEEEeCC-----CCceEEEEEEEEeec
Q psy11061 1 MVNYTLGESPSRTNHFYMKS--------VSGEICIAQDLDFESR---SSYEFPVVATDRG-----GLSTTAMVRIQITDV 64 (212)
Q Consensus 1 ~i~Y~i~~~~~~~~~F~id~--------~tg~i~~~~~lD~E~~---~~~~l~i~a~d~~-----~~~~~~~v~i~V~d~ 64 (212)
+|+|+|..+. ....|.|++ .+|.|+++++||||.. ..|.|.|.|+|.| +.++.+.|+|.|.|+
T Consensus 26 ~v~Ysi~~~~-~~~~F~I~~~~~~f~v~~tG~i~~~~~LD~E~~~~~~~~~~~V~a~d~g~~~~~~~~~~~~v~I~V~Dv 104 (419)
T 3ubh_A 26 KSVFQLEKET-DKETFKIRDDNPWVTVETNGAVRVKKKWDYEELGPEKTIDFWVIITNMGHNAGIKYTDNQRVIILVKDV 104 (419)
T ss_dssp CEEEECCCSS-TTCEEEESSCCSSEEECTTSEEEESSCCCGGGSCTTCEEEEEEEEEC--CCSSSCCEEEEEEEEEEECC
T ss_pred eEEEEEecCC-CCceEEEcCCCccEEECCCcEEEECCccCccccCccceEEEEEEEEeCCCCCCCCCcceEEEEEEEEEC
Confidence 5899997654 347888887 7999999999999997 6999999999987 356789999999999
Q ss_pred CCCCCccCCCc--eEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEcCCCCCcEEEeCCccEEEEeeecCCC--CCC
Q psy11061 65 NDNEPIFNPVE--YNVSLRDDIQTTTAFAVVLATDRDSDRFGTISYKIVTGKDANLFRIDRSSGELFVTRGNFLS--RSN 140 (212)
Q Consensus 65 nd~~P~f~~~~--~~~~v~e~~~~g~~v~~~~a~D~D~~~~~~i~y~i~~~~~~~~F~id~~~G~i~~~~~~~ld--~~~ 140 (212)
|||+|.|.... |.+.|.|+.++|+.++++.|+|+|.+.| +.|+|..++..++|.|++.+|.|++... +| ...
T Consensus 105 NDn~P~F~~~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g~n--~~y~i~~~~~~~~F~I~~~tG~i~~~~~--ld~e~~~ 180 (419)
T 3ubh_A 105 NDEPPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDTDHN--IHYFIVRDRTGGRFEVDERSGVVRTRGT--DLFQLDM 180 (419)
T ss_dssp CCSCCEECCSSSSCEEEECTTCCTTCEEEECCEECSSTTCC--EEEEEEEESSSSCEEECTTTCEEEECSS--SCCCBTC
T ss_pred CCCCCcccCCCCcEEEEEeCCCCCCCEEEEEEEECCCCCce--eEEEEEeCCCCCeEEEeCCceEEEEecc--ccccccc
Confidence 99999999877 7899999999999999999999999876 9999988777789999999999999887 76 567
Q ss_pred eEEEEEEEEECCCC----CeeeeEEEEEEEeeCCCCCCeEecCceEEEEeCCCCCCeEEEEEEEEeCC
Q psy11061 141 SYHINVSAMDGGGN----KCSQDAQVNINIINSHMPIPLFQQSTYSFVVPEDVFKNSIVGTIKAATSD 204 (212)
Q Consensus 141 ~~~l~v~a~D~~~~----~~~~~~~v~I~v~d~nd~~P~f~~~~~~~~v~e~~~~g~~v~~v~a~D~D 204 (212)
.|.|.|.|+|++++ ..++++.++|.|.| ||++|.|.+..|.+.|.|+.++|+.|++|.|+|+|
T Consensus 181 ~y~l~V~A~D~g~~~~~~~~~~t~~v~I~V~d-ndn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~d 247 (419)
T 3ubh_A 181 EYVLYVKAEDQNGKVDDRRFQSTPEERLSIVG-GKRAPQFYMPSYEAEIPENQKKDSDIISIKAKSFA 247 (419)
T ss_dssp EEEEEEEEEEEEEEC--CCEEECCCEEEEEEE-SCCCCEESSSCEEEEEETTCCTTCEEEECCEECSS
T ss_pred EEEEEEEEEECCCCccCcccccceEEEEEEEC-CCCCCceecCeeEEEecCCCCCCcEEEEEEEecCC
Confidence 89999999998764 45678889999999 99999999999999999999999999999999998
No 9
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=100.00 E-value=3.4e-39 Score=278.50 Aligned_cols=207 Identities=24% Similarity=0.356 Sum_probs=186.6
Q ss_pred CeEEEEcCCCC---CcCceEEeCCceEEEECC-cCCcCCCCeEEEEEEEEeCC-----CCceEEEEEEEEeecCCCCCcc
Q psy11061 1 MVNYTLGESPS---RTNHFYMKSVSGEICIAQ-DLDFESRSSYEFPVVATDRG-----GLSTTAMVRIQITDVNDNEPIF 71 (212)
Q Consensus 1 ~i~Y~i~~~~~---~~~~F~id~~tg~i~~~~-~lD~E~~~~~~l~i~a~d~~-----~~~~~~~v~i~V~d~nd~~P~f 71 (212)
+|+|+|.++.. ..++|.|++.+|.|++.+ +||||....|.|.|+|.|.+ ++++++.++|.|.|+|||+|.|
T Consensus 144 ~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~A~D~~g~p~~~~s~t~~v~I~V~DvNDn~P~f 223 (559)
T 3q2w_A 144 MLRYRILSQAPSTPSPNMFTINNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSNTATAVITVTDVNDNPPEF 223 (559)
T ss_dssp CCEEEEEEEESCCSCTTCEEECTTTCEEEECCSCCCTTTCCEEEEEEEEEHHHHCTTTCCEEEEEEEEEEECCSCSCCEE
T ss_pred EEEEEEecCCCCCCCcceEEEeCCceEEEEEeccCCcccCCEEEEEEEEEECCCCCCCCccceEEEEEEEEeCCCCCCcc
Confidence 48999966541 127899999999999988 99999999999999999974 3789999999999999999999
Q ss_pred CCCceEEEEecCCCCCcEEEEEEEEeCCCCC--CceEEEEEEcCCCCCcEEE----eCCccEEEEeeecCCC--CCCeEE
Q psy11061 72 NPVEYNVSLRDDIQTTTAFAVVLATDRDSDR--FGTISYKIVTGKDANLFRI----DRSSGELFVTRGNFLS--RSNSYH 143 (212)
Q Consensus 72 ~~~~~~~~v~e~~~~g~~v~~~~a~D~D~~~--~~~i~y~i~~~~~~~~F~i----d~~~G~i~~~~~~~ld--~~~~~~ 143 (212)
....|.+.|+|+. +|+.++.+.|+|+|.+. ++.+.|+|..++..++|.| +..+|.|++.++ || ....|.
T Consensus 224 ~~~~y~~~V~En~-~g~~v~~v~a~D~D~~~~~n~~~~y~i~~g~~~~~F~I~~~~~~~~G~i~~~~~--LD~E~~~~y~ 300 (559)
T 3q2w_A 224 TAMTFYGEVPENR-VDVIVANLTVTDKDQPHTPAWNAAYRISGGDPTGRFAILTDPNSNDGLVTVVKP--IDFETNRMFV 300 (559)
T ss_dssp SSSEEEEEEESSC-SSEEEEEEEEECCSCTTSTTTSBCCEEEESCTTCCEEEEECTTTCEEEEEECSC--CCTTTCSEEE
T ss_pred ccccceeEecCCC-CCcEEEEEEEEcCCCCCCCceeEEEEEecCCCCCceEEEecCCCCcEEEEeCCC--CCCccCceEE
Confidence 9999999999996 89999999999999975 5689999998888899999 468999999999 88 889999
Q ss_pred EEEEEEECCC------CCeeeeEEEEEEEeeCCCCCCeEecCceEEEEeCCCCCCeEEEEEEEEeCCCCCCeec
Q psy11061 144 INVSAMDGGG------NKCSQDAQVNINIINSHMPIPLFQQSTYSFVVPEDVFKNSIVGTIKAATSDSGKFTEF 211 (212)
Q Consensus 144 l~v~a~D~~~------~~~~~~~~v~I~v~d~nd~~P~f~~~~~~~~v~e~~~~g~~v~~v~a~D~D~~~~~~~ 211 (212)
|.|.|+|.++ ++.+++++|+|+|.|+|| +|.|.+..|.+.|.|+.++|+.|++|.|+|+|.|.++++
T Consensus 301 l~V~A~D~~~~~~g~~~~~~s~~~v~I~V~DvND-~P~f~~~~~~~~v~En~~~g~~v~~v~A~D~D~g~n~~i 373 (559)
T 3q2w_A 301 LTVAAENQVPLAKGIQHPPQSTATVSVTVIDVNE-NPYFAPNPKIIRQEEGLHAGTMLTTLTAQDPDRYMQQNI 373 (559)
T ss_dssp EEEECCBSSCCCTTCCCCGGGEEEEEEEEECCCC-CCEESSSEEEEEEESCCCTTCEEEECCEECSCSSSCCCE
T ss_pred EEEEEEcCCccccCCCCCCceEEEEEEEEEeCCC-CCcccccceEEEEeCCCCCCCEEEEEEEECCCCCCCCce
Confidence 9999999742 456789999999999999 699999999999999999999999999999999877654
No 10
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=100.00 E-value=8e-39 Score=267.54 Aligned_cols=202 Identities=22% Similarity=0.331 Sum_probs=180.5
Q ss_pred eEEEEcCCCCCcCceEEeCCceEEEECCcCCcCCCCeEEEEEEEEeCCC------CceEEEEEEEEeecCCCCCccCCCc
Q psy11061 2 VNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRGG------LSTTAMVRIQITDVNDNEPIFNPVE 75 (212)
Q Consensus 2 i~Y~i~~~~~~~~~F~id~~tg~i~~~~~lD~E~~~~~~l~i~a~d~~~------~~~~~~v~i~V~d~nd~~P~f~~~~ 75 (212)
++|+|..+. ..++|.|++.+|.|++.+.||||....|.|+|+|+|.|+ +++++.++|.|.| |||+|.|.+..
T Consensus 146 ~~y~i~~~~-~~~~F~I~~~tG~i~~~~~ld~e~~~~y~l~V~A~D~g~~~~~~~~~~t~~v~I~V~d-ndn~P~F~~~~ 223 (419)
T 3ubh_A 146 IHYFIVRDR-TGGRFEVDERSGVVRTRGTDLFQLDMEYVLYVKAEDQNGKVDDRRFQSTPEERLSIVG-GKRAPQFYMPS 223 (419)
T ss_dssp EEEEEEEES-SSSCEEECTTTCEEEECSSSCCCBTCEEEEEEEEEEEEEEC--CCEEECCCEEEEEEE-SCCCCEESSSC
T ss_pred eEEEEEeCC-CCCeEEEeCCceEEEEecccccccccEEEEEEEEEECCCCccCcccccceEEEEEEEC-CCCCCceecCe
Confidence 689997654 358999999999999999999999999999999999864 3677889999999 99999999999
Q ss_pred eEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEE-cCCCCCcEEEeCCccEEEEeeecCCC--CC---CeEEEEEEEE
Q psy11061 76 YNVSLRDDIQTTTAFAVVLATDRDSDRFGTISYKIV-TGKDANLFRIDRSSGELFVTRGNFLS--RS---NSYHINVSAM 149 (212)
Q Consensus 76 ~~~~v~e~~~~g~~v~~~~a~D~D~~~~~~i~y~i~-~~~~~~~F~id~~~G~i~~~~~~~ld--~~---~~~~l~v~a~ 149 (212)
|.+.|+|+.+.|+.++++.|+|+| ++.++|+|. .++..++|.|++.+|.|++.+. || .. ..|.|.|.|+
T Consensus 224 y~~~v~En~~~gt~v~~v~A~D~d---n~~i~Ysi~~~~~~~~~F~I~~~tG~i~~~~~--LD~E~~~~~~~y~l~V~a~ 298 (419)
T 3ubh_A 224 YEAEIPENQKKDSDIISIKAKSFA---DREIRYTLKAQGQGAGTFNIGPTSGIVKLAKE--LDFEDLRQPHVYSLIVTAT 298 (419)
T ss_dssp EEEEEETTCCTTCEEEECCEECSS---CCCCEEEEEESSSCCSSEEECTTTCEEEECSC--CCTTCTTSCSEEEEEEEEE
T ss_pred eEEEecCCCCCCcEEEEEEEecCC---CCceEEEEecCCCCCCcEEEECCCCEEEECcc--cCccccccccEEEEEEEEE
Confidence 999999999999999999999987 667999998 4566789999999999999999 88 32 3799999999
Q ss_pred ECCCCCeeeeEEEEEEEeeCCCCCCeEecCceEE-EEeCCCCCCeEEEEEEEEeCCCCCCeec
Q psy11061 150 DGGGNKCSQDAQVNINIINSHMPIPLFQQSTYSF-VVPEDVFKNSIVGTIKAATSDSGKFTEF 211 (212)
Q Consensus 150 D~~~~~~~~~~~v~I~v~d~nd~~P~f~~~~~~~-~v~e~~~~g~~v~~v~a~D~D~~~~~~~ 211 (212)
|.++ ..+++++|+|.|.|+|||+|.|....|.. .|.|+.++|+.|++|.|+|+|.|.++++
T Consensus 299 dd~~-~~s~~~~v~I~V~DvNDn~P~f~~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g~n~~v 360 (419)
T 3ubh_A 299 EDSG-GFSTSVDLTIRVTDVNDNAPKFELPDYQAHNVDEDIPLGTSILRVKAMDSDSGSNAEI 360 (419)
T ss_dssp CTTT-SCEEEEEEEEEEECCCCCCCEESSSEEEEEEEETTCCTTCEEEECCEECSSCGGGGCE
T ss_pred eCCC-CcEEEEEEEEEEEccCCCCCcccCCcceeEEecCCCCCCCEEEEEEEEeCCCCCCCEE
Confidence 7543 46678999999999999999999999987 7999999999999999999999998754
No 11
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=100.00 E-value=1.4e-39 Score=280.20 Aligned_cols=206 Identities=25% Similarity=0.383 Sum_probs=185.9
Q ss_pred CeEEEEcCCCC---CcCceEEeCCceEEEEC-CcCCcCCCCeEEEEEEEEeCC--CCceEEEEEEEEeecCCCCCccCCC
Q psy11061 1 MVNYTLGESPS---RTNHFYMKSVSGEICIA-QDLDFESRSSYEFPVVATDRG--GLSTTAMVRIQITDVNDNEPIFNPV 74 (212)
Q Consensus 1 ~i~Y~i~~~~~---~~~~F~id~~tg~i~~~-~~lD~E~~~~~~l~i~a~d~~--~~~~~~~v~i~V~d~nd~~P~f~~~ 74 (212)
+|+|+|.++.. ..++|.|++.+|.|++. ++||||....|.|.|+|+|.| ++++++.++|.|.|+|||+|.|...
T Consensus 151 ~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~~~ 230 (546)
T 1l3w_A 151 VLSYSILKQDPEEPIPNLFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGAGLSVEGKAIIQITDANDNAPIFDPK 230 (546)
T ss_dssp CCEEEEEEESSCCSCSCSEEECTTTCEEEECSCCCCTTTCCEEEEEEEEEHHHHTSCEEECCEEEEEECCCCCCCCBSCS
T ss_pred EEEEEEeCCCCCcccCCcEEEeCCCceEEEeccCCCcccCceEEEEEEEEECCCCCcceEEEEEEEEeecCCCCCccccc
Confidence 47999976541 34799999999999995 789999999999999999987 4789999999999999999999999
Q ss_pred ceEEEEecCCCCCcEEEEEEEEeCC--CCCCceEEEEEEcCCCCCcEEEe----CCccEEEEeeecCCC--CCCeEEEEE
Q psy11061 75 EYNVSLRDDIQTTTAFAVVLATDRD--SDRFGTISYKIVTGKDANLFRID----RSSGELFVTRGNFLS--RSNSYHINV 146 (212)
Q Consensus 75 ~~~~~v~e~~~~g~~v~~~~a~D~D--~~~~~~i~y~i~~~~~~~~F~id----~~~G~i~~~~~~~ld--~~~~~~l~v 146 (212)
.|.+.|+|+ +.|+.++++.|+|+| .+.|+.+.|+|.. +..++|.|+ ..+|.|++.++ || ....|.|.|
T Consensus 231 ~y~~~V~En-~~gt~v~~v~A~D~D~~~g~n~~v~y~i~~-~~~~~F~I~~d~~~~~G~i~~~~~--LD~E~~~~y~l~V 306 (546)
T 1l3w_A 231 TYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRV-NEGGFFNITTDPESNQGILTTAKG--LDFELRKQYVLQI 306 (546)
T ss_dssp EEEEEEESS-SCCCEEEEECBCCCSCTTSTTSCEECCBSC-CTTSCEEEEECTTTCCEEEEESSC--CCCSSCCCEEEEE
T ss_pred cceEEEEeC-CCCCEEEEEEEEeCCCCCCCCcEEEEEEEe-CCCceEEEEecCCCCeEEEEECcc--CCcccccEEEEEE
Confidence 999999999 999999999999999 6688899999987 667899996 26899999999 88 788999999
Q ss_pred EEEECCC---CCeeeeEEEEEEEeeCCCCCCeEecCceEEEEeCCCCCCeEEEEEEEEeCCCCCCeec
Q psy11061 147 SAMDGGG---NKCSQDAQVNINIINSHMPIPLFQQSTYSFVVPEDVFKNSIVGTIKAATSDSGKFTEF 211 (212)
Q Consensus 147 ~a~D~~~---~~~~~~~~v~I~v~d~nd~~P~f~~~~~~~~v~e~~~~g~~v~~v~a~D~D~~~~~~~ 211 (212)
.|+|+++ +..+++++|+|+|.|+|| +|.|.+..|.+.|.|+.++|+.|++|.|+|+|.|.++++
T Consensus 307 ~a~D~~~~~~~~~s~~~~v~I~V~DvND-~P~f~~~~y~~~V~En~~~g~~v~~v~A~D~D~g~n~~i 373 (546)
T 1l3w_A 307 TVENAEPFSVPLPTSTATVTVTVEDVNE-APFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKL 373 (546)
T ss_dssp CCEESSCCSSCCCCCCEEEEEEEECCCC-CCEESSCEECCCBCTTCCSSEEEEECCEECCCTTCCCCE
T ss_pred EEEECCCCCCCCcceeEEEEEEEEcCCC-CCcEecceEEEEEeCCCCCCCEEEEEEEECCCCCCCceE
Confidence 9999874 346788999999999999 999999999999999999999999999999999877654
No 12
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=100.00 E-value=9.5e-39 Score=275.27 Aligned_cols=206 Identities=26% Similarity=0.401 Sum_probs=186.0
Q ss_pred CeEEEEcCCC---CCcCceEEeCCceEEEE-CCcCCcCCCCeEEEEEEEEeCC--CCceEEEEEEEEeecCCCCCccCCC
Q psy11061 1 MVNYTLGESP---SRTNHFYMKSVSGEICI-AQDLDFESRSSYEFPVVATDRG--GLSTTAMVRIQITDVNDNEPIFNPV 74 (212)
Q Consensus 1 ~i~Y~i~~~~---~~~~~F~id~~tg~i~~-~~~lD~E~~~~~~l~i~a~d~~--~~~~~~~v~i~V~d~nd~~P~f~~~ 74 (212)
+|+|+|.++. ...++|.|++.+|.|++ .++||||....|.|.|+|+|.| ++++++.++|.|.|+|||+|.|...
T Consensus 145 ~i~Ysi~~~~~~~~~~~~F~id~~tG~i~~~~~~LDrE~~~~y~l~V~A~D~g~~~~s~t~~v~I~V~DvNDn~P~F~~~ 224 (550)
T 3q2v_A 145 AIAYTIVSQDPELPHKNMFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGEGLSTTAKAVITVKDINDNAPVFNPS 224 (550)
T ss_dssp CCEEEEEEEESCCSSSCSEEECTTTCEEEECSSCCCTTTCSEEEEEEEEESGGGTSCCCEEEEEEEEECCSCSCCEESSS
T ss_pred EEEEEEecCCCCCCcCCceEEcCCCeEEEEccCCCCcccCcEEEEEEEEEcCCCCCeeEEEEEEEEecccCCCCCEEecc
Confidence 4799996643 13479999999999998 5789999999999999999975 5789999999999999999999999
Q ss_pred ceEEEEecCCCCCcEEEEEEEEeCCCCCCc--eEEEEEEcCCCCCcEEEe----CCccEEEEeeecCCC--CCCeEEEEE
Q psy11061 75 EYNVSLRDDIQTTTAFAVVLATDRDSDRFG--TISYKIVTGKDANLFRID----RSSGELFVTRGNFLS--RSNSYHINV 146 (212)
Q Consensus 75 ~~~~~v~e~~~~g~~v~~~~a~D~D~~~~~--~i~y~i~~~~~~~~F~id----~~~G~i~~~~~~~ld--~~~~~~l~v 146 (212)
.|.+.|.|+ ++|+.++++.|+|+|.+.++ .+.|+|.. +..++|.|+ ..+|.|++.+. || ....|.|.|
T Consensus 225 ~y~~~V~En-~~g~~v~~v~a~D~D~~~n~~~~~~ysi~~-~~~~~F~i~~d~~~~tG~i~~~~~--LD~E~~~~y~l~V 300 (550)
T 3q2v_A 225 TYQGQVPEN-EVNARIATLKVTDDDAPNTPAWKAVYTVVN-DPDQQFVVVTDPTTNDGILKTAKG--LDFEAKQQYILHV 300 (550)
T ss_dssp EEEEEEESS-CSSCCCEEECEECCSCTTSTTTCEEEEESS-CSSCCEEEEECTTTCCEEEEESSC--CCTTTCSEEEEEE
T ss_pred eeEEEEecC-CCCCEEEEEEEEECCCCCCCcEEEEEEEEe-CCCCcEEEEecCCCccEEEEeccc--CCccccceEEEEE
Confidence 999999999 99999999999999998766 56799986 667899998 68999999999 88 889999999
Q ss_pred EEEECCC---CCeeeeEEEEEEEeeCCCCCCeEecCceEEEEeCCCCCCeEEEEEEEEeCCCCCCeec
Q psy11061 147 SAMDGGG---NKCSQDAQVNINIINSHMPIPLFQQSTYSFVVPEDVFKNSIVGTIKAATSDSGKFTEF 211 (212)
Q Consensus 147 ~a~D~~~---~~~~~~~~v~I~v~d~nd~~P~f~~~~~~~~v~e~~~~g~~v~~v~a~D~D~~~~~~~ 211 (212)
.|+|+++ +..+++++|+|+|.|+|| +|.|....|.+.|+|+.++|+.|+++.|+|+|.|.++++
T Consensus 301 ~a~D~~~~~~~~~~~~~~v~I~V~DvND-~P~f~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g~n~~i 367 (550)
T 3q2v_A 301 RVENEEPFEGSLVPSTATVTVDVVDVNE-APIFMPAERRVEVPEDFGVGQEITSYTAREPDTFMDQKI 367 (550)
T ss_dssp EEEESSCCCSSCCCEEEEEEEEEECCCC-CCEESSSSCEEEEETTCCSSCEEEECCEECCCCSTTCCC
T ss_pred EEEeCCCCCCCccceEEEEEEEEEecCC-CCeEcCcceEEEEecCCCCCCEEEEEeCCCCCCCCCCCE
Confidence 9999874 346788999999999999 999999999999999999999999999999999987754
No 13
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=100.00 E-value=4.1e-38 Score=283.03 Aligned_cols=206 Identities=25% Similarity=0.382 Sum_probs=185.8
Q ss_pred CeEEEEcCCCC---CcCceEEeCCceEEEEC-CcCCcCCCCeEEEEEEEEeCC--CCceEEEEEEEEeecCCCCCccCCC
Q psy11061 1 MVNYTLGESPS---RTNHFYMKSVSGEICIA-QDLDFESRSSYEFPVVATDRG--GLSTTAMVRIQITDVNDNEPIFNPV 74 (212)
Q Consensus 1 ~i~Y~i~~~~~---~~~~F~id~~tg~i~~~-~~lD~E~~~~~~l~i~a~d~~--~~~~~~~v~i~V~d~nd~~P~f~~~ 74 (212)
+|+|+|.++.+ ..++|.|++.+|.|++. ++||||....|.|.|+|+|.| ++++++.++|.|.|+|||+|.|...
T Consensus 300 ~v~Ysi~~~~~~~~~~~~F~Id~~tG~I~~~~~~LDrE~~~~y~l~V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~~~ 379 (880)
T 1q55_A 300 VLSYSILKQDPEEPIPNLFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGAGLSVEGKAIIQITDANDNAPIFDPK 379 (880)
T ss_dssp CCEEEEEEESSCCSCSCSEEECTTTCEEEECSCCCCTTTCCEEEEEEEEEHHHHTSCEEECCEEEEEECCCCCCCCBSCS
T ss_pred EEEEEEcCCCCCcccCCeEEEccCCccEEEecccCCHHHcceeEEEEEEEECCCCCccceeEEEEEEEeccCCCCCcccc
Confidence 48999976541 35799999999999996 789999999999999999987 4789999999999999999999999
Q ss_pred ceEEEEecCCCCCcEEEEEEEEeCC--CCCCceEEEEEEcCCCCCcEEEe--C--CccEEEEeeecCCC--CCCeEEEEE
Q psy11061 75 EYNVSLRDDIQTTTAFAVVLATDRD--SDRFGTISYKIVTGKDANLFRID--R--SSGELFVTRGNFLS--RSNSYHINV 146 (212)
Q Consensus 75 ~~~~~v~e~~~~g~~v~~~~a~D~D--~~~~~~i~y~i~~~~~~~~F~id--~--~~G~i~~~~~~~ld--~~~~~~l~v 146 (212)
.|.+.|+|+ ++|+.++++.|+|+| .+.|+.+.|+|.. +..++|.|+ + .+|.|++.++ || ....|.|.|
T Consensus 380 ~y~~~V~En-~~gt~V~~v~A~D~D~~~g~n~~v~Ysi~~-~~~~~F~I~~d~~~~~G~i~~~~~--LD~E~~~~y~l~V 455 (880)
T 1q55_A 380 TYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRV-NEGGFFNITTDPESNQGILTTAKG--LDFELRKQYVLQI 455 (880)
T ss_dssp EEEEEEESS-SCCCEEEEECBCCCSCTTSTTSCEECCBSC-CTTSCEEEEECTTTCCEEEEESSC--CCCSSCCCEEEEE
T ss_pred ceEEEeecC-CCCcEEEEEEEECCCCCCCCCceEEEEEec-CCCceEEEEecCCCceEEEecccC--CCcccCCcEEEEE
Confidence 999999999 999999999999999 5678899999987 667899995 3 6799999999 88 788999999
Q ss_pred EEEECCC---CCeeeeEEEEEEEeeCCCCCCeEecCceEEEEeCCCCCCeEEEEEEEEeCCCCCCeec
Q psy11061 147 SAMDGGG---NKCSQDAQVNINIINSHMPIPLFQQSTYSFVVPEDVFKNSIVGTIKAATSDSGKFTEF 211 (212)
Q Consensus 147 ~a~D~~~---~~~~~~~~v~I~v~d~nd~~P~f~~~~~~~~v~e~~~~g~~v~~v~a~D~D~~~~~~~ 211 (212)
.|+|+++ +..+++++|+|+|.|+|| +|+|.+..|.+.|.|+.++|+.|++|.|+|+|.|.++++
T Consensus 456 ~A~D~~~~~~~~~sst~tV~I~V~DvND-~P~f~~~~y~~~V~En~~~Gt~V~~v~A~D~D~g~n~~v 522 (880)
T 1q55_A 456 TVENAEPFSVPLPTSTATVTVTVEDVNE-APFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKL 522 (880)
T ss_dssp CCEESSCCSSCCCCCCEEEEEEEECCCC-CCEESSCEECCCBCTTCCSSEEEEECCEECCCTTCCCCE
T ss_pred EEEECCCCCCCCcceeEEEEEEEEeCCC-CCEEecCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCcE
Confidence 9999874 346788999999999999 999999999999999999999999999999999877643
No 14
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=100.00 E-value=7.8e-39 Score=249.67 Aligned_cols=162 Identities=15% Similarity=0.181 Sum_probs=147.0
Q ss_pred cCceEEeCCceEEEECCcCCcCCCCeE------------EEEEEEEeCCC----CceEEEEEEEEeecCCCCCc------
Q psy11061 13 TNHFYMKSVSGEICIAQDLDFESRSSY------------EFPVVATDRGG----LSTTAMVRIQITDVNDNEPI------ 70 (212)
Q Consensus 13 ~~~F~id~~tg~i~~~~~lD~E~~~~~------------~l~i~a~d~~~----~~~~~~v~i~V~d~nd~~P~------ 70 (212)
.++|.|++.+|.|+++++||||....| .|+|.|.|.|+ +++++.|.|.|.|+|||+|.
T Consensus 55 ~~~F~Id~~tG~i~~~~~LDrE~~~~y~~~~~G~p~~~~~l~V~a~D~g~~~~~~~~~~~v~I~V~DvNDn~P~~~~~~~ 134 (246)
T 2x2u_A 55 NNWIRIQEDTGLLYLQRSLDHSSWEKLSVRNRGFPLLTVYLKVFLSPTSLREGECQWPGCARVYFSFFNTSFPACSSLKP 134 (246)
T ss_dssp CCSEEECTTTCEEEESSCBCHHHHHHHHHTSTTSCCCEEEEEEECC-------CCCTTTEEEEEEEEESSCCCCGGGCCH
T ss_pred CCEEEECCCcEEEEECCcCChhHhhhhccccCCCcccceEEEEEEEcCCCCCCcccceEEEEEEEEECCCCCCccccccc
Confidence 479999999999999999999999999 99999999873 56788999999999999999
Q ss_pred ----cCCCceEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEcCCCCCcEEEeCCccEEEEeeecCCC--CCCeEEE
Q psy11061 71 ----FNPVEYNVSLRDDIQTTTAFAVVLATDRDSDRFGTISYKIVTGKDANLFRIDRSSGELFVTRGNFLS--RSNSYHI 144 (212)
Q Consensus 71 ----f~~~~~~~~v~e~~~~g~~v~~~~a~D~D~~~~~~i~y~i~~~~~~~~F~id~~~G~i~~~~~~~ld--~~~~~~l 144 (212)
|....|.+.|+|+.++|+.++++.|+|+|.+.|+.++|+|..++ .++|.|++.+|.|++.+. || ....|.|
T Consensus 135 ~~~~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~-~~~F~Id~~tG~i~~~~~--LDrE~~~~y~l 211 (246)
T 2x2u_A 135 RELCFPETRPSFRIRENRPPGTFHQFRLLPVQFLCPQISVAYRLLEGE-GLPFRSAPDSLEVSTRWA--LDREQREKYEL 211 (246)
T ss_dssp HHHHSCSSCCCEEEEBTSCCCEEEECSCHHHHHHCTTSCEEEEEESCT-TSSEECCTTCCEEEESSC--BCTTTCSEEEE
T ss_pred cccccCCCcEEEEEECCCCCCcEEEEEEEEcCCCCCCcEEEEEEccCC-CCCEEEECCcCEEEeCCc--cCccccceEEE
Confidence 99999999999999999999999999999999999999999765 579999999999999999 88 7899999
Q ss_pred EEEEEE-CCCCCeeeeEEEEEEEeeCCCCCCeEe
Q psy11061 145 NVSAMD-GGGNKCSQDAQVNINIINSHMPIPLFQ 177 (212)
Q Consensus 145 ~v~a~D-~~~~~~~~~~~v~I~v~d~nd~~P~f~ 177 (212)
.|.|+| .++|+++++++|.|+|.|+|||+|.|.
T Consensus 212 ~V~A~d~dg~p~~ss~~~v~I~V~DvNDn~P~F~ 245 (246)
T 2x2u_A 212 VAVCTVHAGAREEVVMVPFPVTVYDEDDSAPEFE 245 (246)
T ss_dssp EEEEEEC---CCEEEEEEEEEEEECSSCCSCCCC
T ss_pred EEEEEecCCCCcceEEEEEEEEEEEeCCCCCccC
Confidence 999998 566888999999999999999999995
No 15
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=100.00 E-value=2.2e-36 Score=230.75 Aligned_cols=167 Identities=26% Similarity=0.385 Sum_probs=152.5
Q ss_pred CeEEEEcCCCCCcCceEEeCCceEEEECCcCCcCCCCeEEEEEEEEeCCCCceEEEEEEEEeecCCCCCccCCCceEEEE
Q psy11061 1 MVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRGGLSTTAMVRIQITDVNDNEPIFNPVEYNVSL 80 (212)
Q Consensus 1 ~i~Y~i~~~~~~~~~F~id~~tg~i~~~~~lD~E~~~~~~l~i~a~d~~~~~~~~~v~i~V~d~nd~~P~f~~~~~~~~v 80 (212)
+++|+|..+. ..++|.|++.+|.|+++++||||....|.|.|.|.|.++. ..+.++|.|.|+|||+|.|....|.+.|
T Consensus 41 ~~~y~i~~~~-~~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~v~a~D~~~~-~~~~v~I~V~DvNDn~P~f~~~~y~~~v 118 (210)
T 3mvs_A 41 PLVFGVSGEE-ASRFFAVEPDTGVVWLRQPLDRETKSEFTVEFSVSDHQGV-ITRKVNIQVGDVNDNAPTFHNQPYSVRI 118 (210)
T ss_dssp CCEEEEESHH-HHHHEEECTTTCEEEESSCCCTTTCCEEEEEEEEECSSCE-EEEEEEEEEECCCCCCCEECSCSEEEEE
T ss_pred cEEEEEeCCC-CCCcEEEeCCCCEEEECCccCCcccceEEEEEEEEeCCCC-EEEEEEEEEEeCCCCCCcCCCceEEEEE
Confidence 3689996653 2478999999999999999999999999999999998654 6789999999999999999999999999
Q ss_pred ecCCCCCcEEEEEEEEeCCCCCCceEEEEEEcCCCCCcEEEeCCccEEEEeeecCCC--CCCeEEEEEEEEECCC-CCee
Q psy11061 81 RDDIQTTTAFAVVLATDRDSDRFGTISYKIVTGKDANLFRIDRSSGELFVTRGNFLS--RSNSYHINVSAMDGGG-NKCS 157 (212)
Q Consensus 81 ~e~~~~g~~v~~~~a~D~D~~~~~~i~y~i~~~~~~~~F~id~~~G~i~~~~~~~ld--~~~~~~l~v~a~D~~~-~~~~ 157 (212)
+|+.++|+.++++.|+|+|.+.|+.+.|+|..+ .++|.|++.+|.|++.+. || ....|.|.|.|+|+++ ++++
T Consensus 119 ~E~~~~gt~v~~v~A~D~D~g~n~~v~Y~i~~~--~~~F~Id~~tG~i~~~~~--LD~E~~~~y~l~V~a~D~g~~~~~s 194 (210)
T 3mvs_A 119 PENTPVGTPIFIVNATDPDLGAGGSVLYSFQPP--SPFFAIDSARGIVTVIQE--LDYEVTQAYQLTVNATDQDKTRPLS 194 (210)
T ss_dssp ETTCCTTCEEEECCEECCSSGGGGCEEEEESSC--CSSEEECTTTCEEEECSC--CCTTTCSEEEEEEEEEECCSSSCCE
T ss_pred ECCCCCCCEEEEEEEEeCCCCCCceEEEEEeCC--CCCEEEeCCcEEEEECCc--CCCcccceEEEEEEEEECCCCCCCE
Confidence 999999999999999999999999999999754 469999999999999999 88 7899999999999984 5678
Q ss_pred eeEEEEEEEeeCCCCC
Q psy11061 158 QDAQVNINIINSHMPI 173 (212)
Q Consensus 158 ~~~~v~I~v~d~nd~~ 173 (212)
++++|+|.|.|+||+|
T Consensus 195 ~~~~v~I~V~DvND~~ 210 (210)
T 3mvs_A 195 TLANLAIIITDMQDMD 210 (210)
T ss_dssp EEEEEEEEEECCCCCC
T ss_pred EEEEEEEEEEccCCCC
Confidence 8999999999999986
No 16
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=100.00 E-value=7.6e-36 Score=228.34 Aligned_cols=166 Identities=28% Similarity=0.388 Sum_probs=151.3
Q ss_pred CeEEEEcCCC---CCcCceEEeCCceEEEECCcCCcCCCCeEEEEEEEEeCCC--CceEEEEEEEEeecCCCCCccCCCc
Q psy11061 1 MVNYTLGESP---SRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRGG--LSTTAMVRIQITDVNDNEPIFNPVE 75 (212)
Q Consensus 1 ~i~Y~i~~~~---~~~~~F~id~~tg~i~~~~~lD~E~~~~~~l~i~a~d~~~--~~~~~~v~i~V~d~nd~~P~f~~~~ 75 (212)
+|+|+|.++. .+.++|.|++.+|.|+++++||||....|.|.|.|.|.++ ++..+.++|.|.|+|||+|.|....
T Consensus 33 ~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~ 112 (213)
T 3qrb_A 33 KVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEV 112 (213)
T ss_dssp CEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTSCBCSCCEEEEEEEECCSCCCCEESCSE
T ss_pred eEEEEEEcCCCCCCCCCeEEEECCCCEEEECCccCcccCceEEEEEEEEeCCCCcccceEEEEEEEEEccCCCCccCCCc
Confidence 5899996632 2346999999999999999999999999999999999875 6788999999999999999999999
Q ss_pred eEEEEecCCCCCcEEEEEEEEeCCCC---CCceEEEEEEcCC----CCCcEEEeCCccEEEEe-eecCCC--CCCeEEEE
Q psy11061 76 YNVSLRDDIQTTTAFAVVLATDRDSD---RFGTISYKIVTGK----DANLFRIDRSSGELFVT-RGNFLS--RSNSYHIN 145 (212)
Q Consensus 76 ~~~~v~e~~~~g~~v~~~~a~D~D~~---~~~~i~y~i~~~~----~~~~F~id~~~G~i~~~-~~~~ld--~~~~~~l~ 145 (212)
|.+.|.|+.++|+.++++.|+|+|.+ .|+.+.|+|..++ ..++|.|++.+|.|++. +. || ....|.|.
T Consensus 113 y~~~v~En~~~gt~v~~v~A~D~D~~~~~~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~~--LD~E~~~~y~l~ 190 (213)
T 3qrb_A 113 FEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTSG--LDRESYPTYTLV 190 (213)
T ss_dssp EEEEEETTCCTTCEEEECCEECCSCTTTSSTTCCEEEEEEEESCCSCSCSEEECTTTCEEEECSSC--CCTTTCCEEEEE
T ss_pred eEEEEECCCCCCcEEEEEEEEeCCCCCCCcCcEEEEEEccCCCCCCcCCeEEEECCCcEEEEccCC--CCCccCceEEEE
Confidence 99999999999999999999999998 7899999998764 34699999999999987 67 87 78899999
Q ss_pred EEEEECCCCCeeeeEEEEEEEee
Q psy11061 146 VSAMDGGGNKCSQDAQVNINIIN 168 (212)
Q Consensus 146 v~a~D~~~~~~~~~~~v~I~v~d 168 (212)
|.|+|.++++++++++|+|+|.|
T Consensus 191 V~A~D~g~~~~s~t~~v~I~V~D 213 (213)
T 3qrb_A 191 VQAADLQGEGLSTTAKAVITVKD 213 (213)
T ss_dssp EEEETGGGTSCEEEEEEEEEEEC
T ss_pred EEEEeCCCCCceEEEEEEEEEEC
Confidence 99999998889999999999986
No 17
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=100.00 E-value=8.9e-36 Score=228.03 Aligned_cols=166 Identities=25% Similarity=0.434 Sum_probs=150.7
Q ss_pred CeEEEEcCCC---CCcCceEEeCCceEEEECCcCCcCCCCeEEEEEEEEeCCC--CceEEEEEEEEeecCCCCCccCCCc
Q psy11061 1 MVNYTLGESP---SRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRGG--LSTTAMVRIQITDVNDNEPIFNPVE 75 (212)
Q Consensus 1 ~i~Y~i~~~~---~~~~~F~id~~tg~i~~~~~lD~E~~~~~~l~i~a~d~~~--~~~~~~v~i~V~d~nd~~P~f~~~~ 75 (212)
+|+|+|.++. .+.++|.|++.+|.|+++++||||....|.|.|.|.|.|+ ++..+.++|.|.|+|||+|.|....
T Consensus 33 ~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~ 112 (215)
T 2qvi_A 33 SLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAVDINGNQVENPIDIVINVIDMNDNRPEFLHQV 112 (215)
T ss_dssp CEEEEEESTTSSSTTCSSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTTCCCEEEEEEEEEEECCCCCCCBCSSSE
T ss_pred eEEEEEECCCCCCCCCCcEEEeCCccEEEECcccCcccCCeEEEEEEEEECCCCceeeeEEEEEEEeECCCCCCcccCce
Confidence 5899997643 2358999999999999999999999999999999999885 5688999999999999999999999
Q ss_pred eEEEEecCCCCCcEEEEEEEEeCCC--CCCceEEEEEEcCC----CCCcEEEeCCccEEEEe-eecCCC--CCCeEEEEE
Q psy11061 76 YNVSLRDDIQTTTAFAVVLATDRDS--DRFGTISYKIVTGK----DANLFRIDRSSGELFVT-RGNFLS--RSNSYHINV 146 (212)
Q Consensus 76 ~~~~v~e~~~~g~~v~~~~a~D~D~--~~~~~i~y~i~~~~----~~~~F~id~~~G~i~~~-~~~~ld--~~~~~~l~v 146 (212)
|.+.|+|+.++|+.++++.|+|+|. +.|++++|+|..++ ..+.|.|++.+|.|++. +. || ....|.|.|
T Consensus 113 y~~~v~En~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~~--LD~E~~~~y~l~V 190 (215)
T 2qvi_A 113 WNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRILSQAPSTPSPNMFTINNETGDIITVAAG--LDREKVQQYTLII 190 (215)
T ss_dssp EEEEECSSCCTTCEEEECCCBCSSCTTSTTTCCCCEEEECSSCCSSTTCEEECTTTCEEEECSCC--CCTTTCSEEEEEE
T ss_pred eEEEEeCCCCCCCEEEEEEEEeCCCCCCCCcEEEEEEecCCCCCCcCCeEEEcCCCcEEEEecCC--CCcccCCeEEEEE
Confidence 9999999999999999999999998 67899999999875 45799999999999985 67 87 789999999
Q ss_pred EEEECCCC---CeeeeEEEEEEEee
Q psy11061 147 SAMDGGGN---KCSQDAQVNINIIN 168 (212)
Q Consensus 147 ~a~D~~~~---~~~~~~~v~I~v~d 168 (212)
.|+|.+++ +++++++|+|+|.|
T Consensus 191 ~a~D~g~~p~~~ls~t~~v~I~V~D 215 (215)
T 2qvi_A 191 QATDMEGNPTYGLSNTATAVITVTD 215 (215)
T ss_dssp ECCTTTTCTTTSCCCEEEEEEEECC
T ss_pred EEEECCCCCCCCcceEEEEEEEEEC
Confidence 99999877 67889999999976
No 18
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=100.00 E-value=4.1e-35 Score=225.00 Aligned_cols=166 Identities=23% Similarity=0.337 Sum_probs=148.9
Q ss_pred CeEEEEcCCC---CCcCceEEeCCceEEEECCcCCcCCCCeEEEEEEEEeCCC--CceEEEEEEEEeecCCCCCccCCCc
Q psy11061 1 MVNYTLGESP---SRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRGG--LSTTAMVRIQITDVNDNEPIFNPVE 75 (212)
Q Consensus 1 ~i~Y~i~~~~---~~~~~F~id~~tg~i~~~~~lD~E~~~~~~l~i~a~d~~~--~~~~~~v~i~V~d~nd~~P~f~~~~ 75 (212)
+|+|+|..+. ++.++|.|++.+|.|+++++||||....|.|.|.|.|.++ +++++.++|.|.|+|||+|.|....
T Consensus 33 ~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~ 112 (218)
T 3k5r_A 33 GSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDRETIATYQLYVETTDASGKTLEGPVPLEVIVIDQNDNRPIFREGP 112 (218)
T ss_dssp TCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEECSSSCEEEEEEEEEEEEECTTCCCCCCCSCS
T ss_pred eEEEEEEcCCCCCCCCCeEEEeCCceEEEECCcCCcccCCEEEEEEEEEECCCCceeeeEEEEEEEEeCCCCCCcccCCc
Confidence 4799995421 3468999999999999999999999999999999999876 5688999999999999999999999
Q ss_pred eEEEEecCCCCCcEEEEEEEEeCCC--CCCceEEEEEEcCCCC----CcEEEeCCccEEEEe---eecCCC--C--CCeE
Q psy11061 76 YNVSLRDDIQTTTAFAVVLATDRDS--DRFGTISYKIVTGKDA----NLFRIDRSSGELFVT---RGNFLS--R--SNSY 142 (212)
Q Consensus 76 ~~~~v~e~~~~g~~v~~~~a~D~D~--~~~~~i~y~i~~~~~~----~~F~id~~~G~i~~~---~~~~ld--~--~~~~ 142 (212)
|.+.|+|+.+.|+.++++.|+|+|. +.|+.+.|+|..+... ++|.|++.+|.|++. +. || . ...|
T Consensus 113 y~~~v~E~~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~~~~--LD~E~~~~~~y 190 (218)
T 3k5r_A 113 YIGHVMEGSPTGTTVMRMTAFDADDPATDNALLRYNIRQQTPDKPSPNMFYIDPEKGDIVTVVSPAL--LDRETLENPKY 190 (218)
T ss_dssp EEEEEETTCCTTCEEEECCCSCSSSSCGGGGCEEEEEEEEESCCSCSCSEEECTTTCEEEECSCGGG--CCGGGCSCSEE
T ss_pred eEEEEECCCCCCCEEEEEEEEeCCCCCCCCcEEEEEEecCCCCCCcCCEEEEECCccEEEEeccCCC--CCccccCCCeE
Confidence 9999999999999999999999999 6789999999876543 689999999999887 46 88 5 6699
Q ss_pred EEEEEEEECC--CCCeeeeEEEEEEEee
Q psy11061 143 HINVSAMDGG--GNKCSQDAQVNINIIN 168 (212)
Q Consensus 143 ~l~v~a~D~~--~~~~~~~~~v~I~v~d 168 (212)
.|.|.|+|.+ .|+++++++|+|+|.|
T Consensus 191 ~l~V~a~D~gg~~p~~sst~~v~I~V~D 218 (218)
T 3k5r_A 191 ELIIEAQDMAGLDVGLTGTATATIVIDD 218 (218)
T ss_dssp EEEEEEEECSSTTTTCEEEEEEEEEEEC
T ss_pred EEEEEEEECCCCCCCeeEEEEEEEEEEC
Confidence 9999999998 6788899999999986
No 19
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=100.00 E-value=1.6e-34 Score=219.27 Aligned_cols=160 Identities=29% Similarity=0.466 Sum_probs=146.3
Q ss_pred EEEEcCCCCCcCceEEeCCceEEEECCcCCcCCCCeEEEEEEEEeCCC---CceEEEEEEEEeecCCCCCccCCCceEEE
Q psy11061 3 NYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRGG---LSTTAMVRIQITDVNDNEPIFNPVEYNVS 79 (212)
Q Consensus 3 ~Y~i~~~~~~~~~F~id~~tg~i~~~~~lD~E~~~~~~l~i~a~d~~~---~~~~~~v~i~V~d~nd~~P~f~~~~~~~~ 79 (212)
+|+|.++. ..++|.|++.+|.|+++++||||....|.|.|.|.|.++ +++.+.++|.|.|+|||+|.|....|.+.
T Consensus 34 ~Y~i~~~~-~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~g~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~ 112 (203)
T 3ppe_A 34 MYIIEGES-ANTIFKVQGYDGDIYAFERLDREKKAEYELTAHIIDRRNNRSLEPPSKFIIKVSDINDNAPIFVQKIFNGS 112 (203)
T ss_dssp EEEEEETT-BTTTEEEETTTTEEEESSCCCTTTCCEEEEEEEEEETTTTEECSCCEEEEEEEECCCCCCCEESCSEEEEE
T ss_pred EEEEecCC-CCCeEEEECCcCEEEECccccccccceEEEEEEEEECCCCCcccceEEEEEEEcCCCCCCCCccCCccEEE
Confidence 79997654 357999999999999999999999999999999999974 67889999999999999999999999999
Q ss_pred EecCCCCCcEEEEEEEEeCCC---CCCceEEEEEEcCCCCCcEEEeCCccEEEEe-eecCCC--CCCeEEEEEEEEEC-C
Q psy11061 80 LRDDIQTTTAFAVVLATDRDS---DRFGTISYKIVTGKDANLFRIDRSSGELFVT-RGNFLS--RSNSYHINVSAMDG-G 152 (212)
Q Consensus 80 v~e~~~~g~~v~~~~a~D~D~---~~~~~i~y~i~~~~~~~~F~id~~~G~i~~~-~~~~ld--~~~~~~l~v~a~D~-~ 152 (212)
|+|+.++|+.++++.|+|+|. +.|+++.|+|..++ ++|.|+ .+|.|++. +. || ....|.|.|.|+|. |
T Consensus 113 v~E~~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~i~~~~--~~F~I~-~tG~i~~~~~~--LD~E~~~~y~l~V~A~D~~G 187 (203)
T 3ppe_A 113 VPEMSRLGTSVTKVTAEDADDPTVAGHATVTYQIIKGN--EYFTVD-DSGVIFTARAD--LDRESQSAYEIIVKAKDALG 187 (203)
T ss_dssp EETTCCTTCEEEECCEECCSCTTSSSTTCEEEEEEEST--TTEEEC-TTSEEEESCSC--CCTTTCSEEEEEEEEEETTC
T ss_pred EeccCCCCcEEEEEEEEcCCCcCCCCceEEEEEEeCCC--CcEEEe-CCeEEEECCcC--CCcccCCEEEEEEEEEeCCC
Confidence 999999999999999999994 67889999999765 499999 99999998 88 88 78999999999998 5
Q ss_pred CCCeeeeEEEEEEEee
Q psy11061 153 GNKCSQDAQVNINIIN 168 (212)
Q Consensus 153 ~~~~~~~~~v~I~v~d 168 (212)
.|+++++++|+|+|.|
T Consensus 188 ~p~~s~t~~v~I~V~D 203 (203)
T 3ppe_A 188 LTGESSTATVIIRLTD 203 (203)
T ss_dssp CCCSSSEEEEEEEEEC
T ss_pred CCCCeEEEEEEEEEEC
Confidence 5667889999999986
No 20
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=100.00 E-value=2.4e-35 Score=224.55 Aligned_cols=163 Identities=26% Similarity=0.432 Sum_probs=143.8
Q ss_pred CeEEEEcCCCCCcCceEEeCCceEEEECCcCCcCCCCeEEEEEEEEeCCC---CceEEEEEEEEeecCCCCCccCCCceE
Q psy11061 1 MVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRGG---LSTTAMVRIQITDVNDNEPIFNPVEYN 77 (212)
Q Consensus 1 ~i~Y~i~~~~~~~~~F~id~~tg~i~~~~~lD~E~~~~~~l~i~a~d~~~---~~~~~~v~i~V~d~nd~~P~f~~~~~~ 77 (212)
+|+|+|..+. ..++|.|++.+|.|+++++||||....|.|.|.|.|.++ ++..+.++|.|.|+|||+|.|....|.
T Consensus 34 ~i~Y~l~~~~-~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~ 112 (207)
T 3lnd_A 34 SLKYILSGDG-AGDLFIINENTGDIQATKRLDREEKPVYILRAQAVNRRTGRPVEPESEFIIKIHDINDNEPIFTKDVYT 112 (207)
T ss_dssp TBCCCCCSSS-BTTTEEECTTTCEEEECSCCCGGGCCEEEC----CBSSSCCCCSCCCCCEEEEECCSCCCCEESCSEEE
T ss_pred eEEEEEECCC-CCCeEEEECCceEEEECCCcCcccCCEEEEEEEEEECCCCCccccEEEEEEEECccCCCCCccCCCceE
Confidence 4789997654 346999999999999999999999999999999999863 678889999999999999999999999
Q ss_pred EEEecCCCCCcEEEEEEEEeCCC---CCCceEEEEEEcCCCCCcEEEeCCccEEEEe-eecCCC--CCCeEEEEEEEEEC
Q psy11061 78 VSLRDDIQTTTAFAVVLATDRDS---DRFGTISYKIVTGKDANLFRIDRSSGELFVT-RGNFLS--RSNSYHINVSAMDG 151 (212)
Q Consensus 78 ~~v~e~~~~g~~v~~~~a~D~D~---~~~~~i~y~i~~~~~~~~F~id~~~G~i~~~-~~~~ld--~~~~~~l~v~a~D~ 151 (212)
+.|.|+.+.|+.++++.|+|+|. +.|+.+.|+|..++ ++|.|++.+|.|++. +. || ....|.|.|.|+|.
T Consensus 113 ~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~i~~~~--~~F~Id~~tG~i~~~~~~--lD~E~~~~y~l~V~A~D~ 188 (207)
T 3lnd_A 113 ATVPEMADVGTFVVQVTATDADDPTYGNSAKVVYSILQGQ--PYFSVESETGIIKTALLN--MDRENREQYQVVIQAKDM 188 (207)
T ss_dssp EEEESSCCTTCEEEECCEECSSCTTSSSTTCCEEEEEESG--GGEEECTTTCEEEECCSS--CCC--CCEEEEEEEEESG
T ss_pred EEEeCCCCCCCEEEEEEEEeCCCCCCCCCcEEEEEEcCCC--CCEEEcCCCcEEEECccc--CCcccCCEEEEEEEEEEC
Confidence 99999999999999999999998 77889999999764 599999999999998 77 88 78999999999999
Q ss_pred CCC--CeeeeEEEEEEEee
Q psy11061 152 GGN--KCSQDAQVNINIIN 168 (212)
Q Consensus 152 ~~~--~~~~~~~v~I~v~d 168 (212)
+++ .++++++|+|+|.|
T Consensus 189 g~~~~~~s~t~~v~I~V~D 207 (207)
T 3lnd_A 189 GGQMGGLSGTTTVNITLTD 207 (207)
T ss_dssp GGCTTCBEEEEEEEEEEEC
T ss_pred CCCCCCcEeEEEEEEEEeC
Confidence 876 67899999999986
No 21
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=100.00 E-value=3.1e-32 Score=219.94 Aligned_cols=164 Identities=20% Similarity=0.307 Sum_probs=142.7
Q ss_pred eEEEEcCCCCCcCceEEeCCceEEEECCcCCcCCCCeEEEEEEEEeCCC------CceEEEEEEEEeecCCCCCccCCCc
Q psy11061 2 VNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRGG------LSTTAMVRIQITDVNDNEPIFNPVE 75 (212)
Q Consensus 2 i~Y~i~~~~~~~~~F~id~~tg~i~~~~~lD~E~~~~~~l~i~a~d~~~------~~~~~~v~i~V~d~nd~~P~f~~~~ 75 (212)
++|+|..+. ..++|.|++.+|.|+++++||||....|.|.|.|.|.|+ ++.++.++|.|.| |||+|.|....
T Consensus 141 i~Y~i~~~~-~~~~F~Id~~tG~i~~~~~lD~e~~~~y~l~V~A~D~g~~~~~~~~~~~~~v~I~V~d-nDn~P~F~~~~ 218 (316)
T 3ubf_A 141 IHYFIVRDR-TGGRFEVDERSGVVRTRGTDLFQLDMEYVLYVKAEDQNGKVDDRRFQSTPEERLSIVG-GKRAPQFYMPS 218 (316)
T ss_dssp EEEEEEEEE-SSSCEEECTTTCEEEECSSCCCCTTCEEEEEEEEEESCC-------CBCCCEEEEEEE-SCCCCEESSSS
T ss_pred eEEEEEeCC-CCCEEEEECCccEEEECCcCCcccCcEEEEEEEEEeCCCCCCCccccceEEEEEEEEc-CCCCCEEcCCC
Confidence 689997543 358999999999999999999999999999999999874 4677889999999 99999999999
Q ss_pred eEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEE-cCCCCCcEEEeCCccEEEEeeecCCC--CC---CeEEEEEEEE
Q psy11061 76 YNVSLRDDIQTTTAFAVVLATDRDSDRFGTISYKIV-TGKDANLFRIDRSSGELFVTRGNFLS--RS---NSYHINVSAM 149 (212)
Q Consensus 76 ~~~~v~e~~~~g~~v~~~~a~D~D~~~~~~i~y~i~-~~~~~~~F~id~~~G~i~~~~~~~ld--~~---~~~~l~v~a~ 149 (212)
|.+.|+|+.++|+.++++.|+|+| ++.++|+|. .++..++|.|++.+|.|++.+. || .. ..|.|.|.|+
T Consensus 219 y~~~v~En~~~gt~v~~v~A~D~D---n~~i~Y~i~~~~~~~~~F~Id~~tG~i~~~~~--LD~E~~~~~~~y~l~V~A~ 293 (316)
T 3ubf_A 219 YEAEIPENQKKDSDIISIKAKSFA---DREIRYTLKAQGQGAGTFNIGPTSGIVKLAKE--LDFEDLRQPHVYSLIVTAT 293 (316)
T ss_dssp EEEEEETTCCTTCEEEECCEECTT---CCCEEEEEEEESSCTTTEEECTTTCEEEECSC--CCSSCTTSCSEEEEEEEEE
T ss_pred ceEEEeCCCCCCCEEEEEEEEeCC---CCEEEEEEEcCCCCCCeEEEECCeEEEEECCc--CCccccCCCceEEEEEEEE
Confidence 999999999999999999999998 667999998 5667789999999999999999 88 33 6899999999
Q ss_pred ECCCCCeeeeEEEEEEEeeCCCCC
Q psy11061 150 DGGGNKCSQDAQVNINIINSHMPI 173 (212)
Q Consensus 150 D~~~~~~~~~~~v~I~v~d~nd~~ 173 (212)
|.++ ..+++++|+|+|.|+||||
T Consensus 294 dd~g-~~~~~~~v~I~V~DvNDn~ 316 (316)
T 3ubf_A 294 EDSG-GFSTSVDLTIRVTDVNDNA 316 (316)
T ss_dssp ESSS-SCEEEEEEEEEEECC----
T ss_pred ECCC-CCEEEEEEEEEEEecCCCC
Confidence 5444 3678899999999999986
No 22
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=100.00 E-value=2.9e-32 Score=220.26 Aligned_cols=162 Identities=30% Similarity=0.425 Sum_probs=145.1
Q ss_pred CeEEEEcCCCCCcCceEEeCCceEEEEC-CcCCcCCCCeEEEEEEEEeCCC----CceEEEEEEEEeecCCCCCccCCCc
Q psy11061 1 MVNYTLGESPSRTNHFYMKSVSGEICIA-QDLDFESRSSYEFPVVATDRGG----LSTTAMVRIQITDVNDNEPIFNPVE 75 (212)
Q Consensus 1 ~i~Y~i~~~~~~~~~F~id~~tg~i~~~-~~lD~E~~~~~~l~i~a~d~~~----~~~~~~v~i~V~d~nd~~P~f~~~~ 75 (212)
+|+|+|.++. .+|.|++.+|.|+++ ++||||....|.|.|.|.|.|+ ++..+.|+|.|.|+|||+|.|....
T Consensus 143 ~i~Y~i~~~~---~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~a~D~g~p~~~~s~~~~v~I~V~DvNDn~P~F~~~~ 219 (322)
T 2a62_A 143 KLVYSILEGQ---PYFSIEPETAIIKTALPNMDREAKEEYLVVIQAKDMGGHSGGLSGTTTLTVTLTDVNDNPPKFAQSL 219 (322)
T ss_dssp CEEEEEEECT---TTEEECTTTCCEEECSSCCCGGGCSEEEEEEEEEESCSSSSCCBCCEEEEEEECCCCCCCCCCSCSE
T ss_pred EEEEEEccCC---CCEEEecCCCEEEecccCCCcccCCeEEEEEEEEECCCCCCCceeEEEEEEEEEecCCCCCeecCCC
Confidence 4899998775 689999999999998 8999999999999999999873 6789999999999999999999999
Q ss_pred eEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEcCCCCCcEEEe----CCccEEEEeeecCCC--CCCeEEEEEEEE
Q psy11061 76 YNVSLRDDIQTTTAFAVVLATDRDSDRFGTISYKIVTGKDANLFRID----RSSGELFVTRGNFLS--RSNSYHINVSAM 149 (212)
Q Consensus 76 ~~~~v~e~~~~g~~v~~~~a~D~D~~~~~~i~y~i~~~~~~~~F~id----~~~G~i~~~~~~~ld--~~~~~~l~v~a~ 149 (212)
|.+.|+|+.+.|+.++++.|+|+|.+.|+.+.|+|..++..++|.|+ ..+|.|++.++ || ....|.|.|.|+
T Consensus 220 y~~~v~En~~~gt~v~~v~A~D~D~g~n~~i~Y~i~~g~~~~~F~I~~d~~~~tG~i~~~~~--LD~E~~~~y~l~V~A~ 297 (322)
T 2a62_A 220 YHFSVPEDVVLGTAIGRVKANDQDIGENAQSSYDIIDGDGTALFEITSDAQAQDGVIRLRKP--LDFETKKSYTLKVEAA 297 (322)
T ss_dssp EEEEECSCCSSCCEEEEEECCCSSCGGGTCCEEEEC---CCSSBCCBCCTTTSEEEEEBCSC--CCCSSCCEEEEEEEEE
T ss_pred ceeEeECCCCCCcEEEEEEEEeCCCCCCceEEEEEECCCCCCcEEEeccCCCceEEEEECCc--CCcccCCeEEEEEEEE
Confidence 99999999999999999999999999999999999988777899998 46899999999 88 789999999999
Q ss_pred ECCCCC-------eeeeEEEEEEEe
Q psy11061 150 DGGGNK-------CSQDAQVNINII 167 (212)
Q Consensus 150 D~~~~~-------~~~~~~v~I~v~ 167 (212)
|.+.|+ .+++++|.|+|.
T Consensus 298 D~g~pp~~~~~~~~s~~~~V~I~V~ 322 (322)
T 2a62_A 298 NIHIDPRFSSRGPFKDTATVKIVVE 322 (322)
T ss_dssp CCCSSCTTSSCCCCCCCCEEEEEEC
T ss_pred ECCCCCccccCCCcccEEEEEEEEC
Confidence 988664 246788888873
No 23
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*
Probab=99.97 E-value=5.1e-29 Score=193.34 Aligned_cols=164 Identities=20% Similarity=0.295 Sum_probs=138.5
Q ss_pred CeEEEEcCCCCCcCceEEeCCceEEEEC---CcCCcCCCCeEEE---EEEEEeCC-CCceEEEEEEEEeecCCCCCccCC
Q psy11061 1 MVNYTLGESPSRTNHFYMKSVSGEICIA---QDLDFESRSSYEF---PVVATDRG-GLSTTAMVRIQITDVNDNEPIFNP 73 (212)
Q Consensus 1 ~i~Y~i~~~~~~~~~F~id~~tg~i~~~---~~lD~E~~~~~~l---~i~a~d~~-~~~~~~~v~i~V~d~nd~~P~f~~ 73 (212)
.|+|+|.+.. ..+|.|++.+|.+.+. +.||||....|.+ .+.+.+++ +....+.|+|.|.|+|||+|.|.+
T Consensus 52 ~i~ysl~~~~--~~~f~id~~tg~~~l~~t~~~LDrE~~~~~~~~~~~v~~~~~~~~~~~~~~V~I~V~DvNDn~P~F~~ 129 (242)
T 4apx_B 52 TIELSLKDNV--DYWVLLDPVKQMLFLNSTGRVLDRDPPMNIHSIVVQVQCVNKKVGTVIYHEVRIVVRDRNDNSPTFKH 129 (242)
T ss_dssp SEEEEEESCG--GGCEEEETTTTEEEECCTTSCCCCSTTTCCCEEEEEEEEEETTTCCEEEEEEEEEEECCCCCCCEESS
T ss_pred EEEEEEecCC--CceEEECCCCCEEEEEecCCceeccCCCceEEEEEEEEeECCCCCeEEEEEEEEEEEeCCCCCCcccc
Confidence 4789997654 5799999999999875 6799999766554 44555554 345678899999999999999999
Q ss_pred CceEEEEecCCCCCcEEEE-----EEEEeCCCCCCceEEEEEEcCCCC----CcEEEeC-CccEEEEeeecCCC--CCCe
Q psy11061 74 VEYNVSLRDDIQTTTAFAV-----VLATDRDSDRFGTISYKIVTGKDA----NLFRIDR-SSGELFVTRGNFLS--RSNS 141 (212)
Q Consensus 74 ~~~~~~v~e~~~~g~~v~~-----~~a~D~D~~~~~~i~y~i~~~~~~----~~F~id~-~~G~i~~~~~~~ld--~~~~ 141 (212)
..|.+.|+|+.++|+.|++ +.|+|+|.+.|+.++|+|..+... +.|.|+. .+|.|++.+. || ....
T Consensus 130 ~~y~~~v~En~~~Gt~v~~~~~~~v~A~D~D~g~N~~v~Ysi~~~~~~~~~~~~F~Id~~~tG~i~~~~~--LD~E~~~~ 207 (242)
T 4apx_B 130 ESYYATVNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPEDPTSNDTFEIPLMLTGNVVLRKR--LNYEDKTR 207 (242)
T ss_dssp SCEEEEEETTCCTTCEEECTTTTTTSEECCSSGGGGCEEEEEECCTTSTTHHHHEECSSTTTCCEEECSC--CCTTTCCE
T ss_pred eeeeeEeeeccCCCCEEEEeeecccccccCCCCcCCceEEEEecCCCCcccccceEEcCCCceEEEECCc--CChhhCCE
Confidence 9999999999999999976 779999999999999999877543 4799985 5899999999 88 7889
Q ss_pred EEEEEEEEECCCCC---eeeeEEEEEEEee
Q psy11061 142 YHINVSAMDGGGNK---CSQDAQVNINIIN 168 (212)
Q Consensus 142 ~~l~v~a~D~~~~~---~~~~~~v~I~v~d 168 (212)
|.|.|.|+|+|+++ +++.+.|+|+|+-
T Consensus 208 y~l~V~A~D~G~~~~~~~~~~~~vtVnVe~ 237 (242)
T 4apx_B 208 YYVIIQANDRAQNLNERRTTTTTLTVDLEH 237 (242)
T ss_dssp EEEEEEEEECCSSGGGCCEEEEEEEEEEEC
T ss_pred EEEEEEEEECCcCchhcccCCceEEEEEee
Confidence 99999999999874 6677888888874
No 24
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=99.96 E-value=1.1e-28 Score=188.08 Aligned_cols=138 Identities=18% Similarity=0.360 Sum_probs=125.2
Q ss_pred CCCCccCCCceE--EEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEcCCCCCcEEEeCCccEEEEeeecCCC--CCCe
Q psy11061 66 DNEPIFNPVEYN--VSLRDDIQTTTAFAVVLATDRDSDRFGTISYKIVTGKDANLFRIDRSSGELFVTRGNFLS--RSNS 141 (212)
Q Consensus 66 d~~P~f~~~~~~--~~v~e~~~~g~~v~~~~a~D~D~~~~~~i~y~i~~~~~~~~F~id~~~G~i~~~~~~~ld--~~~~ 141 (212)
+++|.|....|. +.|+|+.++|+.++++.|+|+|. +.+.|++..++..++|.|++.+|.|++.+. || ....
T Consensus 3 n~~P~F~~~~y~~~~~V~E~~~~Gt~v~~v~A~D~D~---~~~~y~i~~~~~~~~F~Id~~tG~i~~~~~--LD~E~~~~ 77 (210)
T 3mvs_A 3 NRLPFFTNHFFDTYLLISEDTPVGSSVTQLLARDMDN---DPLVFGVSGEEASRFFAVEPDTGVVWLRQP--LDRETKSE 77 (210)
T ss_dssp CCCCEECCGGGTSCEEEETTCCTTCEEEECCEECTTC---CCCEEEEESHHHHHHEEECTTTCEEEESSC--CCTTTCCE
T ss_pred CCCCccCCCccceEEEEeCCCCCCCEEEEEEEEeCCC---CcEEEEEeCCCCCCcEEEeCCCCEEEECCc--cCCcccce
Confidence 459999999887 79999999999999999999995 358999987655679999999999999999 88 7889
Q ss_pred EEEEEEEEECCCCCeeeeEEEEEEEeeCCCCCCeEecCceEEEEeCCCCCCeEEEEEEEEeCCCCCCeec
Q psy11061 142 YHINVSAMDGGGNKCSQDAQVNINIINSHMPIPLFQQSTYSFVVPEDVFKNSIVGTIKAATSDSGKFTEF 211 (212)
Q Consensus 142 ~~l~v~a~D~~~~~~~~~~~v~I~v~d~nd~~P~f~~~~~~~~v~e~~~~g~~v~~v~a~D~D~~~~~~~ 211 (212)
|.|.|.|+|.++. .++.|.|+|.|+|||+|.|.+..|.+.|+|+.++|+.|+++.|+|+|.|.++++
T Consensus 78 y~l~v~a~D~~~~---~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~gt~v~~v~A~D~D~g~n~~v 144 (210)
T 3mvs_A 78 FTVEFSVSDHQGV---ITRKVNIQVGDVNDNAPTFHNQPYSVRIPENTPVGTPIFIVNATDPDLGAGGSV 144 (210)
T ss_dssp EEEEEEEECSSCE---EEEEEEEEEECCCCCCCEECSCSEEEEEETTCCTTCEEEECCEECCSSGGGGCE
T ss_pred EEEEEEEEeCCCC---EEEEEEEEEEeCCCCCCcCCCceEEEEEECCCCCCCEEEEEEEEeCCCCCCceE
Confidence 9999999998743 578999999999999999999999999999999999999999999999987753
No 25
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.96 E-value=5.5e-29 Score=173.29 Aligned_cols=114 Identities=27% Similarity=0.358 Sum_probs=106.4
Q ss_pred EEEeecCCCCCccCCCceEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEcCCC--CCcEEEeCCccEEEEeeecCC
Q psy11061 59 IQITDVNDNEPIFNPVEYNVSLRDDIQTTTAFAVVLATDRDSDRFGTISYKIVTGKD--ANLFRIDRSSGELFVTRGNFL 136 (212)
Q Consensus 59 i~V~d~nd~~P~f~~~~~~~~v~e~~~~g~~v~~~~a~D~D~~~~~~i~y~i~~~~~--~~~F~id~~~G~i~~~~~~~l 136 (212)
+.|.|+|||+|.|.+..|.+.|.|+.++|+.++++.|+|+|.+.|++++|+|..+.. .++|.|++.+|.|++.+. |
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~F~Id~~tG~I~~~~~--L 79 (119)
T 2yst_A 2 SSGSSGNDNSPRFEKSVYEADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWLSVLHR--I 79 (119)
T ss_dssp CCCCCSCCCCCCCSSSEEEEEEETTCCTTCEEEECCCCCSSSSCCSCCCCEECSCCTTHHHHEEECTTTCEEEECSC--C
T ss_pred CeEecCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCCeEEEEEecCCCccccEEEEeCCceEEEECcc--C
Confidence 468999999999999999999999999999999999999999999999999987543 368999999999999999 8
Q ss_pred C--CCCeEEEEEEEEECCCCCeeeeEEEEEEEeeCCCCCC
Q psy11061 137 S--RSNSYHINVSAMDGGGNKCSQDAQVNINIINSHMPIP 174 (212)
Q Consensus 137 d--~~~~~~l~v~a~D~~~~~~~~~~~v~I~v~d~nd~~P 174 (212)
| ....|.|.|.|+|.+.++++++++|+|+|.|+|||+|
T Consensus 80 D~E~~~~y~l~V~A~D~g~p~~s~~~~v~I~V~DvNDn~P 119 (119)
T 2yst_A 80 DREEVNQLRFTVMARDRGQPPKTDKATVVLNIKDENDNVP 119 (119)
T ss_dssp CTTTCSEEEEEEEECCSBTTBCCEEEEEEEEEECSTTCCC
T ss_pred CcccCCEEEEEEEEEECCCCCcEEEEEEEEEEEeccCCCC
Confidence 8 7899999999999999888899999999999999998
No 26
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=99.94 E-value=1.4e-26 Score=176.99 Aligned_cols=132 Identities=22% Similarity=0.306 Sum_probs=120.6
Q ss_pred EEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEcCC----CCCcEEEeCCccEEEEeeecCCC--CCCeEEEEEEEEE
Q psy11061 77 NVSLRDDIQTTTAFAVVLATDRDSDRFGTISYKIVTGK----DANLFRIDRSSGELFVTRGNFLS--RSNSYHINVSAMD 150 (212)
Q Consensus 77 ~~~v~e~~~~g~~v~~~~a~D~D~~~~~~i~y~i~~~~----~~~~F~id~~~G~i~~~~~~~ld--~~~~~~l~v~a~D 150 (212)
.+.|+|+.+ |+.++.+.+.|.|.+.++.+.|+|..+. ..++|.|++.+|.|++.+. || ....|.|.|.|+|
T Consensus 6 ~~~V~En~~-g~~~~~v~~~~~D~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~--LDrE~~~~y~l~v~a~D 82 (215)
T 2qvi_A 6 PINLPENSR-GPFPQELVRIRSDRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKP--LDRELIARFHLRAHAVD 82 (215)
T ss_dssp CEEEESSCC-CCSSEEEEECCCGGGGTSCEEEEEESTTSSSTTCSSEEECTTTCEEEECSC--CCTTTCSEEEEEEEEEE
T ss_pred cEEEcCCCC-CCCCEEEEEEeCCCCCCceEEEEEECCCCCCCCCCcEEEeCCccEEEECcc--cCcccCCeEEEEEEEEE
Confidence 678999998 8888889999999888999999998753 3579999999999999999 88 7889999999999
Q ss_pred CCCCCeeeeEEEEEEEeeCCCCCCeEecCceEEEEeCCCCCCeEEEEEEEEeCCC--CCCeec
Q psy11061 151 GGGNKCSQDAQVNINIINSHMPIPLFQQSTYSFVVPEDVFKNSIVGTIKAATSDS--GKFTEF 211 (212)
Q Consensus 151 ~~~~~~~~~~~v~I~v~d~nd~~P~f~~~~~~~~v~e~~~~g~~v~~v~a~D~D~--~~~~~~ 211 (212)
.+++++++++.|.|+|.|+|||+|.|.+..|.+.|+|+.++|+.|++|.|+|+|. |.++++
T Consensus 83 ~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~~~g~n~~i 145 (215)
T 2qvi_A 83 INGNQVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGML 145 (215)
T ss_dssp TTTCCCEEEEEEEEEEECCCCCCCBCSSSEEEEEECSSCCTTCEEEECCCBCSSCTTSTTTCC
T ss_pred CCCCceeeeEEEEEEEeECCCCCCcccCceeEEEEeCCCCCCCEEEEEEEEeCCCCCCCCcEE
Confidence 9998888899999999999999999999999999999999999999999999998 677654
No 27
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=99.94 E-value=3.3e-26 Score=174.84 Aligned_cols=132 Identities=20% Similarity=0.276 Sum_probs=117.6
Q ss_pred ceEEEEecCC--CCCcEEEEEEEEeCCCCCCceEEEEEEcCCCCCcEEEeCCccEEEEeeecCCC--CCCeEEEEEEEEE
Q psy11061 75 EYNVSLRDDI--QTTTAFAVVLATDRDSDRFGTISYKIVTGKDANLFRIDRSSGELFVTRGNFLS--RSNSYHINVSAMD 150 (212)
Q Consensus 75 ~~~~~v~e~~--~~g~~v~~~~a~D~D~~~~~~i~y~i~~~~~~~~F~id~~~G~i~~~~~~~ld--~~~~~~l~v~a~D 150 (212)
.+.+.|.|+. +.|+.++.+ |+|+|.+ ++.+.|+|..++..++|.|++.+|.|++.+. || ....|.|.|.|+|
T Consensus 5 ~~~~~v~En~~~p~~~~v~~v-a~D~D~g-n~~i~Y~l~~~~~~~~F~Id~~tG~i~~~~~--LDrE~~~~y~l~v~a~D 80 (215)
T 2a4e_A 5 WNQFFVIEEYTGPDPVLVGRL-HSDIDSG-DGNIKYILSGEGAGTIFVIDDKSGNIHATKT--LDREERAQYTLMAQAVD 80 (215)
T ss_dssp CCEEEEETTCCSSSCEEEEEC-CCTTCCS-SSCEEEEEEETTBTTTEEECTTTCEEEECSC--CCTTTCSEEEEEEEEEE
T ss_pred EeeEEEeccCCCCCCEEEEEE-EECCCCC-CCeEEEEEECCCCCCeEEEECCceEEEECCc--cCCccCCEEEEEEEEEE
Confidence 3678999995 468888887 7999998 6789999987655679999999999999999 88 7889999999999
Q ss_pred CCC-CCeeeeEEEEEEEeeCCCCCCeEecCceEEEEeCCCCCCeEEEEEEEEeCCC---CCCee
Q psy11061 151 GGG-NKCSQDAQVNINIINSHMPIPLFQQSTYSFVVPEDVFKNSIVGTIKAATSDS---GKFTE 210 (212)
Q Consensus 151 ~~~-~~~~~~~~v~I~v~d~nd~~P~f~~~~~~~~v~e~~~~g~~v~~v~a~D~D~---~~~~~ 210 (212)
.++ ++.+..+.|.|+|.|+|||+|.|.+..|.+.|+|+.++|+.|++|.|+|+|. |.+++
T Consensus 81 ~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~Gt~v~~v~A~D~D~~~~G~n~~ 144 (215)
T 2a4e_A 81 RDTNRPLEPPSEFIVKVQDINDNPPEFLHEIYHANVPERSNVGTSVIQVTASDADDPTYGNSAK 144 (215)
T ss_dssp TTTCCEEEEEEEEEEEEECCCCCCCEESSSSEEEEEETTCCTTCEEEECCEECSSCTTTCSSSC
T ss_pred CCCCCcccccEEEEEEEeeCCCCCCCccCCceEEEEECCCCCCCEEEEEEEEECCCCCCCCceE
Confidence 875 5667889999999999999999999999999999999999999999999997 77654
No 28
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=99.94 E-value=7e-26 Score=173.00 Aligned_cols=130 Identities=19% Similarity=0.270 Sum_probs=117.0
Q ss_pred eEEEEecCCC--CCcEEEEEEEEeCCCCCCceEEEEEEcC----CCCCcEEEeCCccEEEEeeecCCC--CCCeEEEEEE
Q psy11061 76 YNVSLRDDIQ--TTTAFAVVLATDRDSDRFGTISYKIVTG----KDANLFRIDRSSGELFVTRGNFLS--RSNSYHINVS 147 (212)
Q Consensus 76 ~~~~v~e~~~--~g~~v~~~~a~D~D~~~~~~i~y~i~~~----~~~~~F~id~~~G~i~~~~~~~ld--~~~~~~l~v~ 147 (212)
..+.|+|+.+ .++.++++.| |.|. ++.+.|+|..+ ++.++|.|++.+|.|++.++ || ....|.|.|.
T Consensus 5 ~~~~V~En~~~~~~~~v~~v~a-D~d~--n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~--LDrE~~~~y~l~v~ 79 (213)
T 3qrb_A 5 AAISCPENEKGEFPKNLVQIKS-NRDK--ETKVFYSITGQGADKPPVGVFIIERETGWLKVTQP--LDREAIAKYILYSH 79 (213)
T ss_dssp EEEEEETTCCSSSSEEEEECCC-GGGG--TSCEEEEEESBTTTBSSTTSEEECTTTCEEEECSC--CCTTTCSEEEEEEE
T ss_pred CCEEEeCCCCCCCCcEEEEEEE-CCCC--CceEEEEEEcCCCCCCCCCeEEEECCCCEEEECCc--cCcccCceEEEEEE
Confidence 3788999998 5788999998 7765 77899999874 33469999999999999999 88 7889999999
Q ss_pred EEECCCCCeeeeEEEEEEEeeCCCCCCeEecCceEEEEeCCCCCCeEEEEEEEEeCCCC---CCee
Q psy11061 148 AMDGGGNKCSQDAQVNINIINSHMPIPLFQQSTYSFVVPEDVFKNSIVGTIKAATSDSG---KFTE 210 (212)
Q Consensus 148 a~D~~~~~~~~~~~v~I~v~d~nd~~P~f~~~~~~~~v~e~~~~g~~v~~v~a~D~D~~---~~~~ 210 (212)
|+|.++++.+.++.|.|+|.|+|||+|.|.+..|.+.|+|+.++|+.|++|.|+|+|.| .+++
T Consensus 80 a~D~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~~~~~~n~~ 145 (213)
T 3qrb_A 80 AVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAA 145 (213)
T ss_dssp EEETTSCBCSCCEEEEEEEECCSCCCCEESCSEEEEEEETTCCTTCEEEECCEECCSCTTTSSTTC
T ss_pred EEeCCCCcccceEEEEEEEEEccCCCCccCCCceEEEEECCCCCCcEEEEEEEEeCCCCCCCcCcE
Confidence 99999888888999999999999999999999999999999999999999999999998 5554
No 29
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=99.93 E-value=2.4e-25 Score=168.74 Aligned_cols=129 Identities=16% Similarity=0.301 Sum_probs=116.1
Q ss_pred eEEEEecCCCCC--cEEEEEEEEeCCCCCCceEEEEEEcCCCCCcEEEeCCccEEEEeeecCCC--CCCeEEEEEEEEEC
Q psy11061 76 YNVSLRDDIQTT--TAFAVVLATDRDSDRFGTISYKIVTGKDANLFRIDRSSGELFVTRGNFLS--RSNSYHINVSAMDG 151 (212)
Q Consensus 76 ~~~~v~e~~~~g--~~v~~~~a~D~D~~~~~~i~y~i~~~~~~~~F~id~~~G~i~~~~~~~ld--~~~~~~l~v~a~D~ 151 (212)
..+.|.|+.+.| ..++++. +|+|.+.+ +|+|..++..++|.|++.+|.|++.+. || ....|.|.|.|+|.
T Consensus 5 ~~~~V~En~~~~~~~~v~~v~-~D~D~g~~---~Y~i~~~~~~~~F~Id~~tG~i~~~~~--LDrE~~~~y~l~v~a~D~ 78 (203)
T 3ppe_A 5 NRMHIREEIDSPLPHHVGKLT-SSVGNKNA---MYIIEGESANTIFKVQGYDGDIYAFER--LDREKKAEYELTAHIIDR 78 (203)
T ss_dssp SEEEEETTCCSSSCEEEEECC-BCCCCTTE---EEEEEETTBTTTEEEETTTTEEEESSC--CCTTTCCEEEEEEEEEET
T ss_pred ccEEEEccCCCCCCEEEEEEE-ecCCCCCc---EEEEecCCCCCeEEEECCcCEEEECcc--ccccccceEEEEEEEEEC
Confidence 468899999987 8888888 99998765 999998777789999999999999999 88 88899999999999
Q ss_pred CCC-CeeeeEEEEEEEeeCCCCCCeEecCceEEEEeCCCCCCeEEEEEEEEeCCC---CCCee
Q psy11061 152 GGN-KCSQDAQVNINIINSHMPIPLFQQSTYSFVVPEDVFKNSIVGTIKAATSDS---GKFTE 210 (212)
Q Consensus 152 ~~~-~~~~~~~v~I~v~d~nd~~P~f~~~~~~~~v~e~~~~g~~v~~v~a~D~D~---~~~~~ 210 (212)
+++ +.++.+.|.|.|.|+|||+|.|.+..|.+.|+|+.++|+.|++|.|+|+|. |.+++
T Consensus 79 g~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~ 141 (203)
T 3ppe_A 79 RNNRSLEPPSKFIIKVSDINDNAPIFVQKIFNGSVPEMSRLGTSVTKVTAEDADDPTVAGHAT 141 (203)
T ss_dssp TTTEECSCCEEEEEEEECCCCCCCEESCSEEEEEEETTCCTTCEEEECCEECCSCTTSSSTTC
T ss_pred CCCCcccceEEEEEEEcCCCCCCCCccCCccEEEEeccCCCCcEEEEEEEEcCCCcCCCCceE
Confidence 876 466789999999999999999999999999999999999999999999994 66654
No 30
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.93 E-value=2.4e-26 Score=158.59 Aligned_cols=108 Identities=25% Similarity=0.362 Sum_probs=99.1
Q ss_pred EEEeecCCCCCccCCCceEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEcC---CCCCcEEEeCCccEEEEeeecC
Q psy11061 59 IQITDVNDNEPIFNPVEYNVSLRDDIQTTTAFAVVLATDRDSDRFGTISYKIVTG---KDANLFRIDRSSGELFVTRGNF 135 (212)
Q Consensus 59 i~V~d~nd~~P~f~~~~~~~~v~e~~~~g~~v~~~~a~D~D~~~~~~i~y~i~~~---~~~~~F~id~~~G~i~~~~~~~ 135 (212)
|.|.|+|||+|.|.+..|.+.|+|+.++|+.++++.|+|+|.+.|++++|+|... +..++|.|++.+|.|++.+.
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~F~Id~~tG~I~~~~~-- 79 (114)
T 2ee0_A 2 SSGSSGNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRS-- 79 (114)
T ss_dssp CCCCCCCCCCCCCSCSEEEEEEETTCCTTCEEEECCCCSCSSCCCSCCEEEECSSCCHHHHHHEEECTTTCEEEECSC--
T ss_pred CeEeeCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCcEEEEEEccCCCCCccceEEEeCCeeEEEECcc--
Confidence 4689999999999999999999999999999999999999999999999999763 23469999999999999999
Q ss_pred CC--CCCeEEEEEEEEECCCCCeeeeEEEEEEEeeCC
Q psy11061 136 LS--RSNSYHINVSAMDGGGNKCSQDAQVNINIINSH 170 (212)
Q Consensus 136 ld--~~~~~~l~v~a~D~~~~~~~~~~~v~I~v~d~n 170 (212)
|| ....|.|.|.|+|.++++ ++++|+|+|.|+|
T Consensus 80 LD~E~~~~y~l~V~A~D~g~~~--~~~~v~I~V~DvN 114 (114)
T 2ee0_A 80 LDREETAIHKVTVLASDGSSTP--ARATVTINVTDVN 114 (114)
T ss_dssp CCTTTCSEEEEEEEEESSSSSC--EEEEEEEEEECCC
T ss_pred CCcccCcEEEEEEEEEECCCCc--eEEEEEEEEEECC
Confidence 88 789999999999998876 6789999999997
No 31
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=99.93 E-value=1.2e-27 Score=186.38 Aligned_cols=139 Identities=16% Similarity=0.138 Sum_probs=118.7
Q ss_pred ccCCCceEEEEecCCCCCcEEEEEEEEeCCCCC--CceEE------EEEEcCCCCCcEEEeCCccEEEEeeecCCC--CC
Q psy11061 70 IFNPVEYNVSLRDDIQTTTAFAVVLATDRDSDR--FGTIS------YKIVTGKDANLFRIDRSSGELFVTRGNFLS--RS 139 (212)
Q Consensus 70 ~f~~~~~~~~v~e~~~~g~~v~~~~a~D~D~~~--~~~i~------y~i~~~~~~~~F~id~~~G~i~~~~~~~ld--~~ 139 (212)
.|.+..|.+.|+|+.++|+.|+++.|+|+|.+. +.++. |++..+ ..++|.|++.+|.|++.+. || ..
T Consensus 2 ~F~~~~Y~~~V~E~~~~Gt~v~~v~A~D~D~g~~~~~~i~~~~~~~y~i~~~-~~~~F~Id~~tG~i~~~~~--LDrE~~ 78 (246)
T 2x2u_A 2 YFSRDAYWEKLYVDQAAGTPLLYVHALRDAPEEVPSFRLGQHLYGTYRTRLH-ENNWIRIQEDTGLLYLQRS--LDHSSW 78 (246)
T ss_dssp EESCSEEEEEEETTBCTTCEEEECCEECSSTTCCCCCEECSEEECGGGCEEE-ECCSEEECTTTCEEEESSC--BCHHHH
T ss_pred CccCCceEEEeeCCCCCCCEEEEEEEEcCCCCCcceEEEeeccccceeccCC-CCCEEEECCCcEEEEECCc--CChhHh
Confidence 588899999999999999999999999999854 33444 555433 4579999999999999999 99 66
Q ss_pred CeE------------EEEEEEEECCCC--CeeeeEEEEEEEeeCCCCCCe----------EecCceEEEEeCCCCCCeEE
Q psy11061 140 NSY------------HINVSAMDGGGN--KCSQDAQVNINIINSHMPIPL----------FQQSTYSFVVPEDVFKNSIV 195 (212)
Q Consensus 140 ~~~------------~l~v~a~D~~~~--~~~~~~~v~I~v~d~nd~~P~----------f~~~~~~~~v~e~~~~g~~v 195 (212)
..| .|.|.|+|.+.+ .++++++|.|+|.|+|||+|+ |.+..|.+.|+|+.++|+.|
T Consensus 79 ~~y~~~~~G~p~~~~~l~V~a~D~g~~~~~~~~~~~v~I~V~DvNDn~P~~~~~~~~~~~F~~~~y~~~v~En~~~Gt~v 158 (246)
T 2x2u_A 79 EKLSVRNRGFPLLTVYLKVFLSPTSLREGECQWPGCARVYFSFFNTSFPACSSLKPRELCFPETRPSFRIRENRPPGTFH 158 (246)
T ss_dssp HHHHHTSTTSCCCEEEEEEECC-------CCCTTTEEEEEEEEESSCCCCGGGCCHHHHHSCSSCCCEEEEBTSCCCEEE
T ss_pred hhhccccCCCcccceEEEEEEEcCCCCCCcccceEEEEEEEEECCCCCCccccccccccccCCCcEEEEEECCCCCCcEE
Confidence 778 999999999877 567889999999999999999 99999999999999999999
Q ss_pred EEEEEEeCCCCCCeec
Q psy11061 196 GTIKAATSDSGKFTEF 211 (212)
Q Consensus 196 ~~v~a~D~D~~~~~~~ 211 (212)
++|.|+|+|.|.++++
T Consensus 159 ~~v~A~D~D~g~n~~i 174 (246)
T 2x2u_A 159 QFRLLPVQFLCPQISV 174 (246)
T ss_dssp ECSCHHHHHHCTTSCE
T ss_pred EEEEEEcCCCCCCcEE
Confidence 9999999999998764
No 32
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=99.93 E-value=2.1e-25 Score=170.93 Aligned_cols=128 Identities=19% Similarity=0.313 Sum_probs=116.1
Q ss_pred EEEEecCCCCC--cEEEEEEEEeCCCCCCceEEEEEEcC----CCCCcEEEeCCccEEEEeeecCCC--CCCeEEEEEEE
Q psy11061 77 NVSLRDDIQTT--TAFAVVLATDRDSDRFGTISYKIVTG----KDANLFRIDRSSGELFVTRGNFLS--RSNSYHINVSA 148 (212)
Q Consensus 77 ~~~v~e~~~~g--~~v~~~~a~D~D~~~~~~i~y~i~~~----~~~~~F~id~~~G~i~~~~~~~ld--~~~~~~l~v~a 148 (212)
.+.|+|+.+.| ..++++.|.|.|. .+.|+|..+ ++.++|.|++.+|.|++.+. || ....|.|.|.|
T Consensus 7 ~~~V~En~~~g~~~~v~~v~a~D~d~----~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~--LDrE~~~~y~l~v~a 80 (218)
T 3k5r_A 7 PILIPENQRQPFPRDVGKVVDSDRPE----GSKFRLTGKGVDQDPKGTFRINENTGSVSVTRT--LDRETIATYQLYVET 80 (218)
T ss_dssp CEEEETTCCSSCCEEEEECBCTTCCT----TCEEEEEEBTTTBSSTTSEEECTTTCEEEECSC--CCTTTCSEEEEEEEE
T ss_pred cEEEecCCCCCCCEEEEEEEecCCCc----eEEEEEEcCCCCCCCCCeEEEeCCceEEEECCc--CCcccCCEEEEEEEE
Confidence 68899999988 8889999988775 599999753 34589999999999999999 88 78899999999
Q ss_pred EECCCCCeeeeEEEEEEEeeCCCCCCeEecCceEEEEeCCCCCCeEEEEEEEEeCCC--CCCee
Q psy11061 149 MDGGGNKCSQDAQVNINIINSHMPIPLFQQSTYSFVVPEDVFKNSIVGTIKAATSDS--GKFTE 210 (212)
Q Consensus 149 ~D~~~~~~~~~~~v~I~v~d~nd~~P~f~~~~~~~~v~e~~~~g~~v~~v~a~D~D~--~~~~~ 210 (212)
+|.+++++++++.|.|+|.|+|||+|.|.+..|.+.|+|+.++|+.|++|.|+|+|. |.+++
T Consensus 81 ~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~g~n~~ 144 (218)
T 3k5r_A 81 TDASGKTLEGPVPLEVIVIDQNDNRPIFREGPYIGHVMEGSPTGTTVMRMTAFDADDPATDNAL 144 (218)
T ss_dssp ECSSSCEEEEEEEEEEEEECTTCCCCCCCSCSEEEEEETTCCTTCEEEECCCSCSSSSCGGGGC
T ss_pred EECCCCceeeeEEEEEEEEeCCCCCCcccCCceEEEEECCCCCCCEEEEEEEEeCCCCCCCCcE
Confidence 999988888999999999999999999999999999999999999999999999999 56654
No 33
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=99.93 E-value=4.7e-26 Score=173.21 Aligned_cols=130 Identities=20% Similarity=0.364 Sum_probs=111.4
Q ss_pred EEEEecCCCCC--cEEEEEEEEeCCCCCCceEEEEEEcCCCCCcEEEeCCccEEEEeeecCCC--CCCeEEEEEEEEECC
Q psy11061 77 NVSLRDDIQTT--TAFAVVLATDRDSDRFGTISYKIVTGKDANLFRIDRSSGELFVTRGNFLS--RSNSYHINVSAMDGG 152 (212)
Q Consensus 77 ~~~v~e~~~~g--~~v~~~~a~D~D~~~~~~i~y~i~~~~~~~~F~id~~~G~i~~~~~~~ld--~~~~~~l~v~a~D~~ 152 (212)
.+.|.|+.+.+ ..++.+ |+|+|.+ ++.+.|+|..++..++|.|++.+|.|++.+. || ....|.|.|.|+|.+
T Consensus 6 ~~~v~En~~~~~~~~v~~~-a~D~D~g-~~~i~Y~l~~~~~~~~F~Id~~tG~i~~~~~--LDrE~~~~y~l~v~a~D~~ 81 (207)
T 3lnd_A 6 QFFLLEEYTGSDYQYVGKL-HSDQDRG-DGSLKYILSGDGAGDLFIINENTGDIQATKR--LDREEKPVYILRAQAVNRR 81 (207)
T ss_dssp CEEEESCBCSSSCEEEEEC-CCTTCCS-STTBCCCCCSSSBTTTEEECTTTCEEEECSC--CCGGGCCEEEC----CBSS
T ss_pred ccEEEeecCCCCCEEEEEE-EeCCCCC-CceEEEEEECCCCCCeEEEECCceEEEECCC--cCcccCCEEEEEEEEEECC
Confidence 46789998855 577777 8999998 5779999987666679999999999999999 88 788999999999987
Q ss_pred -CCCeeeeEEEEEEEeeCCCCCCeEecCceEEEEeCCCCCCeEEEEEEEEeCCC---CCCee
Q psy11061 153 -GNKCSQDAQVNINIINSHMPIPLFQQSTYSFVVPEDVFKNSIVGTIKAATSDS---GKFTE 210 (212)
Q Consensus 153 -~~~~~~~~~v~I~v~d~nd~~P~f~~~~~~~~v~e~~~~g~~v~~v~a~D~D~---~~~~~ 210 (212)
+++.++++.|.|+|.|+|||+|.|.+..|.+.|+|+.++|+.|++|.|+|+|. |.+++
T Consensus 82 ~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~ 143 (207)
T 3lnd_A 82 TGRPVEPESEFIIKIHDINDNEPIFTKDVYTATVPEMADVGTFVVQVTATDADDPTYGNSAK 143 (207)
T ss_dssp SCCCCSCCCCCEEEEECCSCCCCEESCSEEEEEEESSCCTTCEEEECCEECSSCTTSSSTTC
T ss_pred CCCccccEEEEEEEECccCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCCCcE
Confidence 46667888999999999999999999999999999999999999999999998 76654
No 34
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.89 E-value=1e-23 Score=147.22 Aligned_cols=112 Identities=20% Similarity=0.313 Sum_probs=102.7
Q ss_pred cCCCCCccCCCceEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEcC----CCCCcEEEeCCccEEEEeeecCCC--
Q psy11061 64 VNDNEPIFNPVEYNVSLRDDIQTTTAFAVVLATDRDSDRFGTISYKIVTG----KDANLFRIDRSSGELFVTRGNFLS-- 137 (212)
Q Consensus 64 ~nd~~P~f~~~~~~~~v~e~~~~g~~v~~~~a~D~D~~~~~~i~y~i~~~----~~~~~F~id~~~G~i~~~~~~~ld-- 137 (212)
.+.++|.|....|.+.+.|+.++|+.|+++. +|.|.+.|+.++|+|..+ +..++|.|++.+|.|++.+. ||
T Consensus 5 ~~r~~p~f~~~~~~v~e~e~~~~gt~v~~v~-~D~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~--LDrE 81 (123)
T 2yqg_A 5 SSGQKRAWITAPVALREGEDLSKKNPIAKIH-SDLAEERGLKITYKYTGKGITEPPFGIFVFNKDTGELNVTSI--LDRE 81 (123)
T ss_dssp SSCSCCSSCCCCEEEESSSCCCSSCCCBCCC-CHHHHHHTCCCEEEEEEBTTTBSSCSSEEEETTTTEEEECSC--CBTT
T ss_pred ccccCCccCCCCEEEEecCCCCCCCEEEEEE-ECCCCCCCceEEEEEecCCCCCCcCCCEEEeCCcCEEEECcc--cCcc
Confidence 4688999999999999999999999999999 699998888999999875 24579999999999999999 88
Q ss_pred CCCeEEEEEEEEECCCCCeeeeEEEEEEEeeCCCCCCeEec
Q psy11061 138 RSNSYHINVSAMDGGGNKCSQDAQVNINIINSHMPIPLFQQ 178 (212)
Q Consensus 138 ~~~~~~l~v~a~D~~~~~~~~~~~v~I~v~d~nd~~P~f~~ 178 (212)
....|.|.|.|+|.+++++++++.|.|+|.|+|||+|.|.+
T Consensus 82 ~~~~y~l~V~A~D~g~p~~~~~~~v~I~V~DvNDn~P~F~~ 122 (123)
T 2yqg_A 82 ETPFFLLTGYALDARGNNVEKPLELRIKVLDINDNEPVFTQ 122 (123)
T ss_dssp TBSEEEEEEEEECTTCCEEEEEECCEEEEECTTCCCCCCCC
T ss_pred cCceEEEEEEEEECCCCceEEEEEEEEEEEEcCCCCCEeCC
Confidence 78999999999999998888999999999999999999975
No 35
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*
Probab=99.83 E-value=3e-20 Score=144.03 Aligned_cols=136 Identities=15% Similarity=0.114 Sum_probs=106.4
Q ss_pred CceEEEEecCCCCCcEEEEEEEEe-CCCCCCceEEEEEEcCCCCCcEEEeCCccEEEEeee-cCCC--CCCeE---EEEE
Q psy11061 74 VEYNVSLRDDIQTTTAFAVVLATD-RDSDRFGTISYKIVTGKDANLFRIDRSSGELFVTRG-NFLS--RSNSY---HINV 146 (212)
Q Consensus 74 ~~~~~~v~e~~~~g~~v~~~~a~D-~D~~~~~~i~y~i~~~~~~~~F~id~~~G~i~~~~~-~~ld--~~~~~---~l~v 146 (212)
+.+.+.|.|+.+.|+.+..+.+.+ .|.++++.+.|+|.. +...+|.|++.+|.+.+... ..|| ....| .+.+
T Consensus 20 P~~~vsV~E~sp~GTvv~~~~~~~~~d~~~n~~i~ysl~~-~~~~~f~id~~tg~~~l~~t~~~LDrE~~~~~~~~~~~v 98 (242)
T 4apx_B 20 PATIVAIDEESRNGTILVDNMLIKGTAGGPDPTIELSLKD-NVDYWVLLDPVKQMLFLNSTGRVLDRDPPMNIHSIVVQV 98 (242)
T ss_dssp SSEEEEEETTCCTTCEEESCCCBSSCBSSSSCSEEEEEES-CGGGCEEEETTTTEEEECCTTSCCCCSTTTCCCEEEEEE
T ss_pred CeEEEEeeCCCCCCCEEEEEEEecCCCCCCCCEEEEEEec-CCCceEEECCCCCEEEEEecCCceeccCCCceEEEEEEE
Confidence 347889999999999987655554 445678889999974 44578999999999987532 2266 33344 4555
Q ss_pred EEEECCCCCeeeeEEEEEEEeeCCCCCCeEecCceEEEEeCCCCCCeEEEE-----EEEEeCCCCCCeec
Q psy11061 147 SAMDGGGNKCSQDAQVNINIINSHMPIPLFQQSTYSFVVPEDVFKNSIVGT-----IKAATSDSGKFTEF 211 (212)
Q Consensus 147 ~a~D~~~~~~~~~~~v~I~v~d~nd~~P~f~~~~~~~~v~e~~~~g~~v~~-----v~a~D~D~~~~~~~ 211 (212)
.+.+.. ......+.|+|.|.|+|||+|.|.+..|.+.|+|+.++|+.|++ +.|+|+|.|.|+++
T Consensus 99 ~~~~~~-~~~~~~~~V~I~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~~~~~~v~A~D~D~g~N~~v 167 (242)
T 4apx_B 99 QCVNKK-VGTVIYHEVRIVVRDRNDNSPTFKHESYYATVNELTPVGTTIFTGFSGDNGATDIDDGPNGQI 167 (242)
T ss_dssp EEEETT-TCCEEEEEEEEEEECCCCCCCEESSSCEEEEEETTCCTTCEEECTTTTTTSEECCSSGGGGCE
T ss_pred EeECCC-CCeEEEEEEEEEEEeCCCCCCcccceeeeeEeeeccCCCCEEEEeeecccccccCCCCcCCce
Confidence 555543 23445678999999999999999999999999999999999976 78999999998754
No 36
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A
Probab=99.83 E-value=1.7e-20 Score=128.28 Aligned_cols=97 Identities=22% Similarity=0.347 Sum_probs=77.1
Q ss_pred ceEEEEecCCCCCcE--EEEEEEEeCCCCCCceEEEEEEcC----CCCCcEEEeCCccEEEEeeecCCC--CCCeEEEEE
Q psy11061 75 EYNVSLRDDIQTTTA--FAVVLATDRDSDRFGTISYKIVTG----KDANLFRIDRSSGELFVTRGNFLS--RSNSYHINV 146 (212)
Q Consensus 75 ~~~~~v~e~~~~g~~--v~~~~a~D~D~~~~~~i~y~i~~~----~~~~~F~id~~~G~i~~~~~~~ld--~~~~~~l~v 146 (212)
.|.+.|+|+.++|+. ++++ |.|.+.|+.++|+|..+ +..++|.|++.+|.|++.++ || ....|.|.|
T Consensus 6 ~~~~~v~En~~~gt~~~v~~v---d~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~--LDrE~~~~y~l~V 80 (110)
T 1ncg_A 6 IPPINLPENSRGPFPQELVRI---RSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKP--LDRELIARFHLRA 80 (110)
T ss_dssp CCCEEECSSCCCCSSEEEEEC---CCGGGGGSCCEEEEESBTTTBSSTTSEEECTTTCEEEECSC--CCTTTCCEEEEEE
T ss_pred eeeEEEeCCCCCCCcEEEEEE---eCCCCCCCEEEEEEeCCCCCCCcCCEEEEECCCCEEEECCc--CCcccCCeEEEEE
Confidence 368899999999985 5554 67777889999999864 34679999999999999999 88 788999999
Q ss_pred EEEECCCCCeeeeEEEEEEEeeCCCCCCeE
Q psy11061 147 SAMDGGGNKCSQDAQVNINIINSHMPIPLF 176 (212)
Q Consensus 147 ~a~D~~~~~~~~~~~v~I~v~d~nd~~P~f 176 (212)
.|+|.+++++++++.|.|+|.|+|||+|.|
T Consensus 81 ~A~D~g~p~~~~~~~v~I~V~DvNDn~P~F 110 (110)
T 1ncg_A 81 HAVDINGNQVENPIDIVINVIDMNDNRPEF 110 (110)
T ss_dssp EEECTTSCBCSCCEEEEEEEC---------
T ss_pred EEEECCCCceeeEEEEEEEEEECCCCCCCC
Confidence 999999888888999999999999999998
No 37
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}
Probab=99.76 E-value=6.6e-20 Score=128.02 Aligned_cols=104 Identities=14% Similarity=0.190 Sum_probs=88.4
Q ss_pred CceEEEEecCCCCCcEEEEEEEEeCCCCCCceE---EEEEEcCCCCCcEEEeCCccEEEEeeecCCC--CC----CeEEE
Q psy11061 74 VEYNVSLRDDIQTTTAFAVVLATDRDSDRFGTI---SYKIVTGKDANLFRIDRSSGELFVTRGNFLS--RS----NSYHI 144 (212)
Q Consensus 74 ~~~~~~v~e~~~~g~~v~~~~a~D~D~~~~~~i---~y~i~~~~~~~~F~id~~~G~i~~~~~~~ld--~~----~~~~l 144 (212)
..+.+.|+|+.++|+.|+++ |.|.|.+. +.+ .|+|..++..++|.||+.+|.|++.+. || .. ..|.|
T Consensus 11 ~~~~~~V~E~~~~Gt~V~~v-a~D~d~~~-~~i~~~~Y~i~~~~~~~~F~Id~~tG~i~~~~~--LDRE~~c~~~~~y~l 86 (125)
T 1wyj_A 11 ATITYSVLEETDRGSLVGNL-AKDLGLSL-RELITRGAQILSKGNKQLLQLEQKSGNLLLKEK--LDREELCGSTNPCIL 86 (125)
T ss_dssp CCCCEEECSSCCTTCEEEES-TTTTTCCH-HHHHHTTCEEECSSSSCSEEECSSSSEEEESSC--CCSTTTCTTCSSCCB
T ss_pred ceEEEEEECCCCCCCEEEEE-EecCCCCC-CceeeEEEEEecCCCCCeEEEECCccEEEECcc--ccchhhcccCCcEEE
Confidence 45778999999999999999 88888763 334 899998777789999999999999999 88 55 78999
Q ss_pred EEEEEECCCCCeeeeEEEEEEEeeCCCCCCeEecCceEEE
Q psy11061 145 NVSAMDGGGNKCSQDAQVNINIINSHMPIPLFQQSTYSFV 184 (212)
Q Consensus 145 ~v~a~D~~~~~~~~~~~v~I~v~d~nd~~P~f~~~~~~~~ 184 (212)
.|.|.+.. +. ..++|.|+|.|+|||+|.|.+..|.++
T Consensus 87 ~v~a~~~~-p~--~~~~V~I~V~DvNDN~P~F~~~~y~vs 123 (125)
T 1wyj_A 87 HFQVLLKS-PV--QFIQGEIQLQDVNDHAPEFMEDESGPS 123 (125)
T ss_dssp CCEEEETT-TT--EEECCCEEECCCCCCCCCCCCCCCCCC
T ss_pred EEEEEECC-CC--eEEEEEEEEEEccCCCCcCCCcEEEEe
Confidence 99999843 33 478999999999999999999887654
No 38
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus}
Probab=99.73 E-value=3e-17 Score=109.80 Aligned_cols=89 Identities=18% Similarity=0.334 Sum_probs=80.2
Q ss_pred eEEEEecCCC--CCcEEEEEEEEeCCCCCCceEEEEEEcCCCCCcEEEeCCccEEEEeeecCCC--CCCeEEEEEEEEEC
Q psy11061 76 YNVSLRDDIQ--TTTAFAVVLATDRDSDRFGTISYKIVTGKDANLFRIDRSSGELFVTRGNFLS--RSNSYHINVSAMDG 151 (212)
Q Consensus 76 ~~~~v~e~~~--~g~~v~~~~a~D~D~~~~~~i~y~i~~~~~~~~F~id~~~G~i~~~~~~~ld--~~~~~~l~v~a~D~ 151 (212)
..+.|+|+.+ .|+.++++. +|+|.+ |+++.|+|..+...+.|.|++.+|.|++.++ || ....|.|+|.|+|+
T Consensus 6 ~~~~v~En~~~~~g~~v~~v~-~D~D~g-Ng~v~Ysi~~~~~~~~F~Id~~tG~i~~~~~--LDrE~~~~y~l~V~A~D~ 81 (99)
T 1zvn_A 6 NQFFVLEEYTGTDPLYVGKLH-SDMDRG-DGSIKYILSGEGAGIVFTIDDTTGDIHAIQR--LDREERSQYTLRAQALDR 81 (99)
T ss_dssp CEEEEEGGGCSSSCEEEEECC-BTTCCS-SSCEEEEEEETTBTTTEEECTTTCEEEECSC--CCTTTCSEEEEEEEEEET
T ss_pred cEEEEECCCCCCCCcEEEEEE-ECCCCC-CCEEEEEEeCCCCCceEEEeCCCCCEEECee--cCCccCCeEEEEEEEEEC
Confidence 5688999976 579999999 999999 9999999987666678999999999999999 88 88999999999999
Q ss_pred C-CCCeeeeEEEEEEEee
Q psy11061 152 G-GNKCSQDAQVNINIIN 168 (212)
Q Consensus 152 ~-~~~~~~~~~v~I~v~d 168 (212)
+ ++++++.+.|.|+|.|
T Consensus 82 G~~p~l~~~~~v~I~V~D 99 (99)
T 1zvn_A 82 RTGRPMEPESEFIIKIQD 99 (99)
T ss_dssp TTCCBSSCCEEEEEEEEC
T ss_pred CCCCCcceeEEEEEEEeC
Confidence 8 5888889999999986
No 39
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A
Probab=99.72 E-value=4.1e-17 Score=108.97 Aligned_cols=89 Identities=15% Similarity=0.270 Sum_probs=77.9
Q ss_pred eEEEEecCCC--CCcEEEEEEEEeCCCCCCceEEEEEEcCCCCCcEEEeCCccEEEEeeecCCC--CCCeEEEEEEEEEC
Q psy11061 76 YNVSLRDDIQ--TTTAFAVVLATDRDSDRFGTISYKIVTGKDANLFRIDRSSGELFVTRGNFLS--RSNSYHINVSAMDG 151 (212)
Q Consensus 76 ~~~~v~e~~~--~g~~v~~~~a~D~D~~~~~~i~y~i~~~~~~~~F~id~~~G~i~~~~~~~ld--~~~~~~l~v~a~D~ 151 (212)
+.+.|+|+.+ .|+.++++. +|+|.+ |++++|+|..+...+.|.||+.+|.|++.++ || ....|.|.|.|+|+
T Consensus 5 ~~~~v~En~~~p~~~~v~~v~-~D~D~g-N~~v~Ysi~~~~~~~~F~Id~~tG~i~~~~~--LDrE~~~~y~l~v~A~D~ 80 (98)
T 1zxk_A 5 NQMFVLEEFSGPEPILVGRLH-TDLDPG-SKKIKYILSGDGAGTIFQINDITGDIHAIKR--LDREEKAEYTLTAQAVDF 80 (98)
T ss_dssp CEEEECGGGCSSSCEEEEECC-BCCCCC---CEEEEEEETTBTTTEEECTTTCEEEECSC--CCTTTCSEEEEEEEEEET
T ss_pred ceEEEECCCCCCCCeEEEEEE-ECCCCC-CCEEEEEEeCCCCCCEEEEECCccEEEECcc--CCCcCCCeEEEEEEEEEC
Confidence 5788999985 789999997 999999 9999999987655568999999999999999 88 88999999999999
Q ss_pred CC-CCeeeeEEEEEEEee
Q psy11061 152 GG-NKCSQDAQVNINIIN 168 (212)
Q Consensus 152 ~~-~~~~~~~~v~I~v~d 168 (212)
+. ++.++.+.|.|.|.|
T Consensus 81 g~~~~l~~~~~v~I~V~D 98 (98)
T 1zxk_A 81 ETNKPLEPPSEFIIKVQD 98 (98)
T ss_dssp TTCCBSSCCEEEEEEECC
T ss_pred CCCCCcceeEEEEEEEEC
Confidence 86 677888999999976
No 40
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A
Probab=99.72 E-value=1.6e-17 Score=113.49 Aligned_cols=71 Identities=25% Similarity=0.469 Sum_probs=55.2
Q ss_pred CeEEEEcCCC---CCcCceEEeCCceEEEECCcCCcCCCCeEEEEEEEEeCCC--CceEEEEEEEEeecCCCCCcc
Q psy11061 1 MVNYTLGESP---SRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRGG--LSTTAMVRIQITDVNDNEPIF 71 (212)
Q Consensus 1 ~i~Y~i~~~~---~~~~~F~id~~tg~i~~~~~lD~E~~~~~~l~i~a~d~~~--~~~~~~v~i~V~d~nd~~P~f 71 (212)
+|+|+|..+. ...++|.|++.+|.|+++++||||....|.|.|.|.|.|+ +++++.+.|.|.|+|||+|.|
T Consensus 35 ~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D~g~p~~~~~~~v~I~V~DvNDn~P~F 110 (110)
T 1ncg_A 35 SLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAVDINGNQVENPIDIVINVIDMNDNRPEF 110 (110)
T ss_dssp CCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEECTTSCBCSCCEEEEEEEC---------
T ss_pred EEEEEEeCCCCCCCcCCEEEEECCCCEEEECCcCCcccCCeEEEEEEEEECCCCceeeEEEEEEEEEECCCCCCCC
Confidence 5899997531 3468999999999999999999999999999999999884 678899999999999999998
No 41
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.72 E-value=2e-17 Score=115.25 Aligned_cols=73 Identities=26% Similarity=0.423 Sum_probs=65.2
Q ss_pred CeEEEEcCCC---CCcCceEEeCCceEEEECCcCCcCCCCeEEEEEEEEeCCC--CceEEEEEEEEeecCCCCCccCC
Q psy11061 1 MVNYTLGESP---SRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRGG--LSTTAMVRIQITDVNDNEPIFNP 73 (212)
Q Consensus 1 ~i~Y~i~~~~---~~~~~F~id~~tg~i~~~~~lD~E~~~~~~l~i~a~d~~~--~~~~~~v~i~V~d~nd~~P~f~~ 73 (212)
+|+|+|..+. ...++|.|++.+|.|+++++||||....|.|.|.|.|.|+ +++++.+.|.|.|+|||+|.|.+
T Consensus 45 ~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D~g~p~~~~~~~v~I~V~DvNDn~P~F~~ 122 (123)
T 2yqg_A 45 KITYKYTGKGITEPPFGIFVFNKDTGELNVTSILDREETPFFLLTGYALDARGNNVEKPLELRIKVLDINDNEPVFTQ 122 (123)
T ss_dssp CCEEEEEEBTTTBSSCSSEEEETTTTEEEECSCCBTTTBSEEEEEEEEECTTCCEEEEEECCEEEEECTTCCCCCCCC
T ss_pred eEEEEEecCCCCCCcCCCEEEeCCcCEEEECcccCcccCceEEEEEEEEECCCCceEEEEEEEEEEEEcCCCCCEeCC
Confidence 4899997642 2457999999999999999999999999999999999885 67889999999999999999975
No 42
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A
Probab=99.68 E-value=2.1e-16 Score=105.79 Aligned_cols=87 Identities=23% Similarity=0.395 Sum_probs=78.4
Q ss_pred eEEEEecCCCC--CcEEEEEEEEeCCCCCCceEEEEEEc----CCCCCcEEEeCCccEEEEeeecCCC--CCCeEEEEEE
Q psy11061 76 YNVSLRDDIQT--TTAFAVVLATDRDSDRFGTISYKIVT----GKDANLFRIDRSSGELFVTRGNFLS--RSNSYHINVS 147 (212)
Q Consensus 76 ~~~~v~e~~~~--g~~v~~~~a~D~D~~~~~~i~y~i~~----~~~~~~F~id~~~G~i~~~~~~~ld--~~~~~~l~v~ 147 (212)
..+.|+|+.++ |+.++++.|+|+|. .++|+|.. ++..+.|.|++.+|.|++.++ || ....|.|.|.
T Consensus 5 ~~~~V~En~~~~~g~~v~~v~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~--LDrE~~~~y~l~V~ 78 (99)
T 3k6d_A 5 PSISIPENQRIPFPKIVGRVVVSDRIP----GSKIKLYGKGVDQEPKGIFKINENSGEVSVTKA--LDREAIPSYQLQVE 78 (99)
T ss_dssp CCEEEETTCCSCSSEEEEECBCSSCCT----TCEEEEESBTTTBSSTTSEEECTTTCEEEECSC--CCTTTCCEEEEEEE
T ss_pred CcEEEeCCCCCCCCcEEEEEEEECCCC----cEEEEEecCcCCCCCCCEEEEECCceEEEECcC--CCcccCceEEEEEE
Confidence 46789999999 99999999999997 59999975 344579999999999999999 88 8899999999
Q ss_pred EEECCCCCeeeeEEEEEEEee
Q psy11061 148 AMDGGGNKCSQDAQVNINIIN 168 (212)
Q Consensus 148 a~D~~~~~~~~~~~v~I~v~d 168 (212)
|+|+++++.++.+.|.|+|.|
T Consensus 79 A~D~g~~~l~~~~~v~I~V~D 99 (99)
T 3k6d_A 79 TTDENGKTIEGPVDLEILVID 99 (99)
T ss_dssp EECTTCCEEEEEEEEEEEEEC
T ss_pred EEECCCCceeeEEEEEEEEEC
Confidence 999999988889999999986
No 43
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus}
Probab=99.67 E-value=1.1e-15 Score=102.32 Aligned_cols=86 Identities=19% Similarity=0.392 Sum_probs=77.2
Q ss_pred EEEEecCCCCC--cEEEEEEEEeCCCCCCceEEEEEEcC----CCCCcEEEeCCccEEEEeeecCCC--CCCeEEEEEEE
Q psy11061 77 NVSLRDDIQTT--TAFAVVLATDRDSDRFGTISYKIVTG----KDANLFRIDRSSGELFVTRGNFLS--RSNSYHINVSA 148 (212)
Q Consensus 77 ~~~v~e~~~~g--~~v~~~~a~D~D~~~~~~i~y~i~~~----~~~~~F~id~~~G~i~~~~~~~ld--~~~~~~l~v~a 148 (212)
.+.|+||.+.| +.++++.|+|+|. .++|+|... +..+.|.||+.+|.|++.++ || ....|.|.|.|
T Consensus 6 ~~~v~EN~~~g~~~~v~~V~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~--LDrE~~~~y~l~v~A 79 (99)
T 3k6i_A 6 PILIPENQRPPFPRSVGKVIRSEGTE----GAKFRLSGKGVDQDPKGIFRINEISGDVSVTRP--LDREAIANYELEVEV 79 (99)
T ss_dssp CEEEETTCCSSSCEEEEECEETTCCS----SEEEEEESBTTTBSSTTSEEECTTTCEEEECSC--CCTTTCCEEEEEEEE
T ss_pred cEEEeCCCCCCCCeEEEEEEEEcCCC----eEEEEEeCCCCCCCcCCEEEEECCCcEEEECcc--cCCccCCEEEEEEEE
Confidence 46899999986 8899999999997 599999753 34579999999999999999 88 88999999999
Q ss_pred EECCCCCeeeeEEEEEEEee
Q psy11061 149 MDGGGNKCSQDAQVNINIIN 168 (212)
Q Consensus 149 ~D~~~~~~~~~~~v~I~v~d 168 (212)
+|+++++.++.++|.|+|.|
T Consensus 80 ~D~g~~~l~~~~~v~I~V~D 99 (99)
T 3k6i_A 80 TDLSGKIIDGPVRLDISVID 99 (99)
T ss_dssp EETTSCEEEEEEEEEEEEEC
T ss_pred EECCCCceeeeEEEEEEEEC
Confidence 99999998999999999986
No 44
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus}
Probab=99.67 E-value=7.2e-16 Score=103.38 Aligned_cols=86 Identities=19% Similarity=0.390 Sum_probs=77.3
Q ss_pred EEEEecCCCC--CcEEEEEEEEeCCCCCCceEEEEEEcC----CCCCcEEEeCCccEEEEeeecCCC--CCCeEEEEEEE
Q psy11061 77 NVSLRDDIQT--TTAFAVVLATDRDSDRFGTISYKIVTG----KDANLFRIDRSSGELFVTRGNFLS--RSNSYHINVSA 148 (212)
Q Consensus 77 ~~~v~e~~~~--g~~v~~~~a~D~D~~~~~~i~y~i~~~----~~~~~F~id~~~G~i~~~~~~~ld--~~~~~~l~v~a 148 (212)
.+.|+||.+. |+.++++.|+|+|. .++|+|... ++.+.|.||+.+|.|++.++ || ....|.|.|.|
T Consensus 7 ~~~V~EN~~~~~g~~v~~V~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~--LDrE~~~~y~l~V~A 80 (100)
T 3k6f_A 7 PILIPENQRQPFPRDVGKVVDSDRPE----GSKFRLTGKGVDQDPKGTFRINENTGSVSVTRT--LDRETIATYQLYVET 80 (100)
T ss_dssp CEEEETTCCSSSCEEEEECEETTCCT----TCEEEEEEBTTTBSSTTSEEECTTTCEEEECSC--CCTTTCSEEEEEEEE
T ss_pred cEEEeCCCCCCCCcEEEEEEEEcCCC----CEEEEEeCCCCCCCcCCEEEEECCCCEEEECcc--cCCcCCCEEEEEEEE
Confidence 5789999998 89999999999997 499999753 34579999999999999999 88 88999999999
Q ss_pred EECCCCCeeeeEEEEEEEee
Q psy11061 149 MDGGGNKCSQDAQVNINIIN 168 (212)
Q Consensus 149 ~D~~~~~~~~~~~v~I~v~d 168 (212)
+|++++++++.++|.|+|.|
T Consensus 81 ~D~g~p~l~~~~~v~I~V~D 100 (100)
T 3k6f_A 81 TDASGKTLEGPVPLEVIVID 100 (100)
T ss_dssp ECTTCCEEEEEEEEEEEEEC
T ss_pred EECCCCcccceEEEEEEEEC
Confidence 99999998899999999986
No 45
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}
Probab=99.65 E-value=2.5e-17 Score=114.92 Aligned_cols=75 Identities=20% Similarity=0.201 Sum_probs=65.8
Q ss_pred EEEEcCCCCCcCceEEeCCceEEEECCcCCcCCC----CeEEEEEEEEeCCCCceEEEEEEEEeecCCCCCccCCCceEE
Q psy11061 3 NYTLGESPSRTNHFYMKSVSGEICIAQDLDFESR----SSYEFPVVATDRGGLSTTAMVRIQITDVNDNEPIFNPVEYNV 78 (212)
Q Consensus 3 ~Y~i~~~~~~~~~F~id~~tg~i~~~~~lD~E~~----~~~~l~i~a~d~~~~~~~~~v~i~V~d~nd~~P~f~~~~~~~ 78 (212)
+|+|.++. ..++|.|++.||.|+++++||||.. ..|.|.++|.+..+. ..+.|.|.|.|+|||+|.|.+..|.+
T Consensus 45 ~Y~i~~~~-~~~~F~Id~~tG~i~~~~~LDRE~~c~~~~~y~l~v~a~~~~p~-~~~~V~I~V~DvNDN~P~F~~~~y~v 122 (125)
T 1wyj_A 45 GAQILSKG-NKQLLQLEQKSGNLLLKEKLDREELCGSTNPCILHFQVLLKSPV-QFIQGEIQLQDVNDHAPEFMEDESGP 122 (125)
T ss_dssp TCEEECSS-SSCSEEECSSSSEEEESSCCCSTTTCTTCSSCCBCCEEEETTTT-EEECCCEEECCCCCCCCCCCCCCCCC
T ss_pred EEEEecCC-CCCeEEEECCccEEEECccccchhhcccCCcEEEEEEEEECCCC-eEEEEEEEEEEccCCCCcCCCcEEEE
Confidence 79996654 3579999999999999999999999 999999999986554 57899999999999999999988865
Q ss_pred E
Q psy11061 79 S 79 (212)
Q Consensus 79 ~ 79 (212)
.
T Consensus 123 s 123 (125)
T 1wyj_A 123 S 123 (125)
T ss_dssp C
T ss_pred e
Confidence 4
No 46
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B
Probab=99.64 E-value=1.1e-15 Score=103.43 Aligned_cols=88 Identities=22% Similarity=0.364 Sum_probs=76.4
Q ss_pred EEEEecCCC--CCcEEEEEEEEeCCCCCCceEEEEEEcCCC----CCcEEEeCCccEEEEeeecCCC--CCCeEEEEEEE
Q psy11061 77 NVSLRDDIQ--TTTAFAVVLATDRDSDRFGTISYKIVTGKD----ANLFRIDRSSGELFVTRGNFLS--RSNSYHINVSA 148 (212)
Q Consensus 77 ~~~v~e~~~--~g~~v~~~~a~D~D~~~~~~i~y~i~~~~~----~~~F~id~~~G~i~~~~~~~ld--~~~~~~l~v~a 148 (212)
.+.|+|+.+ .|..++++.| | .+.|+.++|+|..++. .++|.||+.+|.|++.++ || ....|.|+|.|
T Consensus 10 ~~~V~En~~~~~~~~v~~v~A-d--~g~N~~i~Ysi~~~~~~~~~~~~F~Id~~tG~I~~~~~--LDrE~~~~y~l~V~A 84 (105)
T 2omz_B 10 PISCPENEKGPFPKNLVQIKS-N--KDKEGKVFYSITGQGADTPPVGVFIIERETGWLKVTEP--LDRERIATYTLFSHA 84 (105)
T ss_dssp CCCEESSCCSSSSEEEEECEE-G--GGGSSCCEEEEEEBTTTBSSTTSEEECTTTCEEEECSC--CCTTTCCEEEEEEEE
T ss_pred CEEEeCCCCCCCCcEEEEEEC-C--CCCCCeEEEEEeCCCCCCCccCEEEEeCCCCEEEECcc--CCcCCCCeEEEEEEE
Confidence 467999998 4789999999 3 3568899999987643 468999999999999999 88 88999999999
Q ss_pred EECCCCCeeeeEEEEEEEeeC
Q psy11061 149 MDGGGNKCSQDAQVNINIINS 169 (212)
Q Consensus 149 ~D~~~~~~~~~~~v~I~v~d~ 169 (212)
+|.++++.++++.|.|+|.|+
T Consensus 85 ~D~g~p~~~~~~~v~I~V~Dv 105 (105)
T 2omz_B 85 VSSNGNAVEDPMEILITVTDQ 105 (105)
T ss_dssp ECTTSCBSSCCEEEEEEEEC-
T ss_pred EECCCCceeeEEEEEEEEEeC
Confidence 999999888899999999985
No 47
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.62 E-value=7.2e-16 Score=106.75 Aligned_cols=69 Identities=29% Similarity=0.479 Sum_probs=62.0
Q ss_pred CeEEEEcCCCC-CcCceEEeCCceEEEECCcCCcCCCCeEEEEEEEEeCCC--CceEEEEEEEEeecCCCCC
Q psy11061 1 MVNYTLGESPS-RTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRGG--LSTTAMVRIQITDVNDNEP 69 (212)
Q Consensus 1 ~i~Y~i~~~~~-~~~~F~id~~tg~i~~~~~lD~E~~~~~~l~i~a~d~~~--~~~~~~v~i~V~d~nd~~P 69 (212)
+|+|+|..+.. ...+|.|++.+|.|+++++||||....|.|.|.|+|.|+ +++++.++|.|.|+|||+|
T Consensus 48 ~i~Y~i~~~~~~~~~~F~Id~~tG~I~~~~~LD~E~~~~y~l~V~A~D~g~p~~s~~~~v~I~V~DvNDn~P 119 (119)
T 2yst_A 48 QIEYVFGAATESVRRLLRLDETSGWLSVLHRIDREEVNQLRFTVMARDRGQPPKTDKATVVLNIKDENDNVP 119 (119)
T ss_dssp CCCCEECSCCTTHHHHEEECTTTCEEEECSCCCTTTCSEEEEEEEECCSBTTBCCEEEEEEEEEECSTTCCC
T ss_pred eEEEEEecCCCccccEEEEeCCceEEEECccCCcccCCEEEEEEEEEECCCCCcEEEEEEEEEEEeccCCCC
Confidence 47899977642 246999999999999999999999999999999999885 6789999999999999998
No 48
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A
Probab=99.49 E-value=1.6e-13 Score=91.42 Aligned_cols=62 Identities=23% Similarity=0.390 Sum_probs=55.0
Q ss_pred CeEEEEcCCCCCcCceEEeCCceEEEECCcCCcCCCCeEEEEEEEEeCCC---CceEEEEEEEEee
Q psy11061 1 MVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRGG---LSTTAMVRIQITD 63 (212)
Q Consensus 1 ~i~Y~i~~~~~~~~~F~id~~tg~i~~~~~lD~E~~~~~~l~i~a~d~~~---~~~~~~v~i~V~d 63 (212)
+|+|+|..+. ..++|.|++.+|.|+++++||||....|.|.|.|+|.|+ +++++.+.|.|.|
T Consensus 34 ~v~Ysi~~~~-~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~A~D~g~~~~l~~~~~v~I~V~D 98 (98)
T 1zxk_A 34 KIKYILSGDG-AGTIFQINDITGDIHAIKRLDREEKAEYTLTAQAVDFETNKPLEPPSEFIIKVQD 98 (98)
T ss_dssp CEEEEEEETT-BTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTTCCBSSCCEEEEEEECC
T ss_pred EEEEEEeCCC-CCCEEEEECCccEEEECccCCCcCCCeEEEEEEEEECCCCCCcceeEEEEEEEEC
Confidence 5899996643 346899999999999999999999999999999999974 6888999999876
No 49
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B
Probab=99.48 E-value=1.6e-13 Score=92.62 Aligned_cols=64 Identities=20% Similarity=0.297 Sum_probs=55.6
Q ss_pred CeEEEEcCCC---CCcCceEEeCCceEEEECCcCCcCCCCeEEEEEEEEeCCC--CceEEEEEEEEeec
Q psy11061 1 MVNYTLGESP---SRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRGG--LSTTAMVRIQITDV 64 (212)
Q Consensus 1 ~i~Y~i~~~~---~~~~~F~id~~tg~i~~~~~lD~E~~~~~~l~i~a~d~~~--~~~~~~v~i~V~d~ 64 (212)
+|+|+|..+. .+.++|.|++.+|.|+++++||||....|.|.|+|.|.|+ +++++.|+|.|.|+
T Consensus 37 ~i~Ysi~~~~~~~~~~~~F~Id~~tG~I~~~~~LDrE~~~~y~l~V~A~D~g~p~~~~~~~v~I~V~Dv 105 (105)
T 2omz_B 37 KVFYSITGQGADTPPVGVFIIERETGWLKVTEPLDRERIATYTLFSHAVSSNGNAVEDPMEILITVTDQ 105 (105)
T ss_dssp CCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEECTTSCBSSCCEEEEEEEEC-
T ss_pred eEEEEEeCCCCCCCccCEEEEeCCCCEEEECccCCcCCCCeEEEEEEEEECCCCceeeEEEEEEEEEeC
Confidence 5899996643 1246899999999999999999999999999999999985 67889999999985
No 50
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus}
Probab=99.47 E-value=2.8e-13 Score=90.37 Aligned_cols=62 Identities=31% Similarity=0.443 Sum_probs=54.9
Q ss_pred CeEEEEcCCCCCcCceEEeCCceEEEECCcCCcCCCCeEEEEEEEEeCC-C--CceEEEEEEEEee
Q psy11061 1 MVNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRG-G--LSTTAMVRIQITD 63 (212)
Q Consensus 1 ~i~Y~i~~~~~~~~~F~id~~tg~i~~~~~lD~E~~~~~~l~i~a~d~~-~--~~~~~~v~i~V~d 63 (212)
+|+|+|..+. ..++|.|++.+|.|++.++||||....|.|+|.|+|.| + +++.+.+.|.|.|
T Consensus 35 ~v~Ysi~~~~-~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D~G~~p~l~~~~~v~I~V~D 99 (99)
T 1zvn_A 35 SIKYILSGEG-AGIVFTIDDTTGDIHAIQRLDREERSQYTLRAQALDRRTGRPMEPESEFIIKIQD 99 (99)
T ss_dssp CEEEEEEETT-BTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTTCCBSSCCEEEEEEEEC
T ss_pred EEEEEEeCCC-CCceEEEeCCCCCEEECeecCCccCCeEEEEEEEEECCCCCCcceeEEEEEEEeC
Confidence 5899996654 34789999999999999999999999999999999997 3 6788999999986
No 51
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.46 E-value=1.6e-13 Score=94.07 Aligned_cols=65 Identities=28% Similarity=0.442 Sum_probs=58.1
Q ss_pred CeEEEEcCCC--CCcCceEEeCCceEEEECCcCCcCCCCeEEEEEEEEeCCCCceEEEEEEEEeecC
Q psy11061 1 MVNYTLGESP--SRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRGGLSTTAMVRIQITDVN 65 (212)
Q Consensus 1 ~i~Y~i~~~~--~~~~~F~id~~tg~i~~~~~lD~E~~~~~~l~i~a~d~~~~~~~~~v~i~V~d~n 65 (212)
+|+|+|.... ....+|.|++.+|.|+++++||||....|.|.|.|+|.|+..+++.++|.|.|+|
T Consensus 48 ~i~Y~i~~~~~~~~~~~F~Id~~tG~I~~~~~LD~E~~~~y~l~V~A~D~g~~~~~~~v~I~V~DvN 114 (114)
T 2ee0_A 48 EIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVN 114 (114)
T ss_dssp CCEEEECSSCCHHHHHHEEECTTTCEEEECSCCCTTTCSEEEEEEEEESSSSSCEEEEEEEEEECCC
T ss_pred EEEEEEccCCCCCccceEEEeCCeeEEEECccCCcccCcEEEEEEEEEECCCCceEEEEEEEEEECC
Confidence 5899997632 2357999999999999999999999999999999999987778999999999998
No 52
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus}
Probab=99.44 E-value=7.5e-13 Score=88.40 Aligned_cols=63 Identities=24% Similarity=0.440 Sum_probs=54.7
Q ss_pred CeEEEEcCC-C--CCcCceEEeCCceEEEECCcCCcCCCCeEEEEEEEEeCCC--CceEEEEEEEEee
Q psy11061 1 MVNYTLGES-P--SRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRGG--LSTTAMVRIQITD 63 (212)
Q Consensus 1 ~i~Y~i~~~-~--~~~~~F~id~~tg~i~~~~~lD~E~~~~~~l~i~a~d~~~--~~~~~~v~i~V~d 63 (212)
+|+|+|... . .+.+.|.|++.+|.|+++++||||....|.|.|+|+|.|+ +++++.+.|.|.|
T Consensus 32 ~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~A~D~g~~~l~~~~~v~I~V~D 99 (99)
T 3k6i_A 32 GAKFRLSGKGVDQDPKGIFRINEISGDVSVTRPLDREAIANYELEVEVTDLSGKIIDGPVRLDISVID 99 (99)
T ss_dssp SEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEETTSCEEEEEEEEEEEEEC
T ss_pred eEEEEEeCCCCCCCcCCEEEEECCCcEEEECcccCCccCCEEEEEEEEEECCCCceeeeEEEEEEEEC
Confidence 589999652 1 3458999999999999999999999999999999999986 5678899998876
No 53
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A
Probab=99.44 E-value=6.4e-13 Score=88.71 Aligned_cols=63 Identities=25% Similarity=0.363 Sum_probs=54.4
Q ss_pred CeEEEEcCC---CCCcCceEEeCCceEEEECCcCCcCCCCeEEEEEEEEeCCC--CceEEEEEEEEee
Q psy11061 1 MVNYTLGES---PSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRGG--LSTTAMVRIQITD 63 (212)
Q Consensus 1 ~i~Y~i~~~---~~~~~~F~id~~tg~i~~~~~lD~E~~~~~~l~i~a~d~~~--~~~~~~v~i~V~d 63 (212)
+|+|+|... ..+.+.|.|++.+|.|+++++||||....|.|.|.|.|.|+ +++.+.++|.|.|
T Consensus 32 ~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D~g~~~l~~~~~v~I~V~D 99 (99)
T 3k6d_A 32 GSKIKLYGKGVDQEPKGIFKINENSGEVSVTKALDREAIPSYQLQVETTDENGKTIEGPVDLEILVID 99 (99)
T ss_dssp TCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEECTTCCEEEEEEEEEEEEEC
T ss_pred cEEEEEecCcCCCCCCCEEEEECCceEEEECcCCCcccCceEEEEEEEEECCCCceeeEEEEEEEEEC
Confidence 589999642 13468999999999999999999999999999999999886 5677889888876
No 54
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus}
Probab=99.42 E-value=7.6e-13 Score=88.53 Aligned_cols=63 Identities=21% Similarity=0.377 Sum_probs=54.4
Q ss_pred CeEEEEcCC-C--CCcCceEEeCCceEEEECCcCCcCCCCeEEEEEEEEeCCC--CceEEEEEEEEee
Q psy11061 1 MVNYTLGES-P--SRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRGG--LSTTAMVRIQITD 63 (212)
Q Consensus 1 ~i~Y~i~~~-~--~~~~~F~id~~tg~i~~~~~lD~E~~~~~~l~i~a~d~~~--~~~~~~v~i~V~d 63 (212)
+|+|+|... . .+.+.|.|++.+|.|++.++||||....|.|.|+|+|.|+ +++++.+.|.|.|
T Consensus 33 ~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D~g~p~l~~~~~v~I~V~D 100 (100)
T 3k6f_A 33 GSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDRETIATYQLYVETTDASGKTLEGPVPLEVIVID 100 (100)
T ss_dssp TCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEECTTCCEEEEEEEEEEEEEC
T ss_pred CEEEEEeCCCCCCCcCCEEEEECCCCEEEECcccCCcCCCEEEEEEEEEECCCCcccceEEEEEEEEC
Confidence 479999542 1 3457999999999999999999999999999999999986 5678899998876
No 55
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus}
Probab=99.42 E-value=5e-14 Score=94.83 Aligned_cols=93 Identities=14% Similarity=0.218 Sum_probs=72.9
Q ss_pred CceEEEEecCCCCCcEEEEEEEEeCCCCCC--ceEEEEEEcCCCCCcEEEeCCccEEEEeeecCCC--C----CCeEEEE
Q psy11061 74 VEYNVSLRDDIQTTTAFAVVLATDRDSDRF--GTISYKIVTGKDANLFRIDRSSGELFVTRGNFLS--R----SNSYHIN 145 (212)
Q Consensus 74 ~~~~~~v~e~~~~g~~v~~~~a~D~D~~~~--~~i~y~i~~~~~~~~F~id~~~G~i~~~~~~~ld--~----~~~~~l~ 145 (212)
..+.+.|+|+.+.|+.|+++ |.|.|...+ +.+.|+|..++..++|.|++.+|.|++.+. || . ...|.+.
T Consensus 3 ~~~~~~V~E~~~~Gt~Vg~v-a~D~~~~~~~~~~~~y~i~~~~~~~~F~Id~~tG~i~~~~~--LDRE~~~~~~~~~~~~ 79 (103)
T 1wuz_A 3 SQIHYSIPEEAKHGTFVGRI-AQDLGLELTELVPRLFRVASKDRGDLLEVNLQNGILFVNSR--IDREELCGRSAECSIH 79 (103)
T ss_dssp CEEEEEEESSCCTTCBCCCH-HHHHTCCHHHHTTTTBCCBCSSCSCSEEEETTTTEEEECSC--CSHHHHCSSSSSCEEE
T ss_pred eeEEEEEECCCCCCCEEEEE-EeccCCCCcccccEEEEEEeCCCccEEEEECCeEEEEECCc--CccccccCCCCcEEEE
Confidence 45788999999999999999 999886422 357899988777789999999999999998 98 2 1334455
Q ss_pred EEEEECCCCCeeeeEEEEEEEeeCCCC
Q psy11061 146 VSAMDGGGNKCSQDAQVNINIINSHMP 172 (212)
Q Consensus 146 v~a~D~~~~~~~~~~~v~I~v~d~nd~ 172 (212)
+.|... .|. ..+.|.|+|.|+|||
T Consensus 80 ~~v~~~-~p~--~~~~v~I~V~DiNDN 103 (103)
T 1wuz_A 80 LEVIVD-RPL--QVFHVEVEVRDINDN 103 (103)
T ss_dssp EEEEET-TTT--EEEEEEEEEECCSCC
T ss_pred EEEEEC-CCC--EEEEEEEEEEEcCCC
Confidence 555443 333 378999999999997
No 56
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus}
Probab=99.17 E-value=2.3e-11 Score=81.71 Aligned_cols=64 Identities=16% Similarity=0.240 Sum_probs=49.3
Q ss_pred eEEEEcCCCCCcCceEEeCCceEEEECCcCCcCCC----CeEEEEEEEEeCCCCceEEEEEEEEeecCCC
Q psy11061 2 VNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESR----SSYEFPVVATDRGGLSTTAMVRIQITDVNDN 67 (212)
Q Consensus 2 i~Y~i~~~~~~~~~F~id~~tg~i~~~~~lD~E~~----~~~~l~i~a~d~~~~~~~~~v~i~V~d~nd~ 67 (212)
++|+|.++. ...+|.|++.||.|+++++||||.. ..|.+.++|....++ ..+.+.|.|.|+|||
T Consensus 36 ~~y~i~~~~-~~~~F~Id~~tG~i~~~~~LDRE~~~~~~~~~~~~~~v~~~~p~-~~~~v~I~V~DiNDN 103 (103)
T 1wuz_A 36 RLFRVASKD-RGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLEVIVDRPL-QVFHVEVEVRDINDN 103 (103)
T ss_dssp TTBCCBCSS-CSCSEEEETTTTEEEECSCCSHHHHCSSSSSCEEEEEEEETTTT-EEEEEEEEEECCSCC
T ss_pred EEEEEEeCC-CccEEEEECCeEEEEECCcCccccccCCCCcEEEEEEEEECCCC-EEEEEEEEEEEcCCC
Confidence 578986654 4689999999999999999999985 234444444443344 478999999999997
No 57
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=93.76 E-value=1.4 Score=32.07 Aligned_cols=117 Identities=15% Similarity=0.166 Sum_probs=67.4
Q ss_pred CCCeEEEEEEEEeCCCCceE-EEEEEEEeecCCCCCccCCCceEEEEecCCC---CC-cEEEEEEEEeCCCCCCceEEEE
Q psy11061 35 SRSSYEFPVVATDRGGLSTT-AMVRIQITDVNDNEPIFNPVEYNVSLRDDIQ---TT-TAFAVVLATDRDSDRFGTISYK 109 (212)
Q Consensus 35 ~~~~~~l~i~a~d~~~~~~~-~~v~i~V~d~nd~~P~f~~~~~~~~v~e~~~---~g-~~v~~~~a~D~D~~~~~~i~y~ 109 (212)
....|.|+++|.|..|.... ..+.|.|.+ ..+|.. .+.-+.+.. .| ..-+...|.|.+.. -.++.|.
T Consensus 59 ~~G~htlta~A~D~aGn~s~s~~v~vtV~~--~~~Ptv-----~itsP~~g~~~~~~~~vtl~~~AsD~~g~-V~~Ve~~ 130 (190)
T 3pdd_A 59 AVGAYNLKAVAVLSDGRRIESPVTPVLVKV--IVKPTV-----KLTAPKSNVVAYGNEFLKITATASDSDGK-ISRVDFL 130 (190)
T ss_dssp CSEEEEEEEEEEETTSCEEECCCEEEEEEC--CCCCEE-----EEEECCTTCCCBTTSEEEEEEEEECSSSC-EEEEEEE
T ss_pred CCccEEEEEEEEECCCCEeeecceeEEecc--CCCCce-----eecCCCCCcEEecCCeEEEEEEEECCCCc-EEEEEEE
Confidence 35689999999999876543 457777776 446754 233333322 23 44466777775521 2245555
Q ss_pred EEcCCCCCcEEEeCCccEEEEeeecCCCCCCeEEEEEEEEECCCCCeeeeEEEEEEEee
Q psy11061 110 IVTGKDANLFRIDRSSGELFVTRGNFLSRSNSYHINVSAMDGGGNKCSQDAQVNINIIN 168 (212)
Q Consensus 110 i~~~~~~~~F~id~~~G~i~~~~~~~ld~~~~~~l~v~a~D~~~~~~~~~~~v~I~v~d 168 (212)
+. | ....-+. ++....... . ..+.|.|+++|+|..|... ....|.|+|.+
T Consensus 131 ~d-g---~~v~t~t-~~~y~~~~~--~-~~G~~tl~a~A~D~aGn~s-~s~~vtvtv~~ 180 (190)
T 3pdd_A 131 VD-G---EVIGSDR-EAPYEYEWK--A-VEGNHEISVIAYDDDDAAS-TPDSVKIFVKQ 180 (190)
T ss_dssp ET-T---EEEEEEC-SSSEEEEEE--C-CSEEEEEEEEEEETTCCBC-CCEEEEEEEBC
T ss_pred EC-C---EEEeccc-CCCEEEEEe--c-CCeeEEEEEEEEECCCCEE-ecceEEEEECC
Confidence 42 1 1222221 122222222 1 5789999999999987753 35667777765
No 58
>1op4_A Neural-cadherin; beta sandwich, cadherin-like domain, cell adhesion; NMR {Mus musculus} SCOP: b.1.6.1
Probab=92.42 E-value=1.6 Score=30.89 Aligned_cols=81 Identities=15% Similarity=0.245 Sum_probs=60.3
Q ss_pred CCCCccCCCceEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEcCCCCCcEEEeCCccEEEEeeecCCC-CCCeEEE
Q psy11061 66 DNEPIFNPVEYNVSLRDDIQTTTAFAVVLATDRDSDRFGTISYKIVTGKDANLFRIDRSSGELFVTRGNFLS-RSNSYHI 144 (212)
Q Consensus 66 d~~P~f~~~~~~~~v~e~~~~g~~v~~~~a~D~D~~~~~~i~y~i~~~~~~~~F~id~~~G~i~~~~~~~ld-~~~~~~l 144 (212)
...|-|....|...++-+...|..++++.-.|... +..+.|... .+..|.|+. .|.|.+... +. ....-.|
T Consensus 31 ~C~pGF~~~~~~~~vp~~l~~g~~lgkV~F~dC~g--~~~~~~~ss---Dp~dFkV~~-DGtVya~r~--v~L~~~~~~F 102 (159)
T 1op4_A 31 LCKTGFPEDVYSAVLPKDVHEGQPLLNVKFSNCNR--KRKVQYESS---EPADFKVDE-DGTVYAVRS--FPLTAEQAKF 102 (159)
T ss_dssp CCCCBCCSCEEEECCCCSSCSSCCEEECCCBCCSS--CCCEEEECC---CSSEEEEET-TTEEEEESC--CSCSSSCEEE
T ss_pred cccCCcCcceeEEeccccccCCceeceeecccCCC--CCceeEEcC---CCCCeEEeC-CCcEEEecc--eeecCCCcEE
Confidence 34688999999777777778899999988877753 445777653 223799984 699999888 66 5555688
Q ss_pred EEEEEECCCC
Q psy11061 145 NVSAMDGGGN 154 (212)
Q Consensus 145 ~v~a~D~~~~ 154 (212)
.|.|.|....
T Consensus 103 ~V~a~D~~t~ 112 (159)
T 1op4_A 103 LIYAQDKETQ 112 (159)
T ss_dssp EEEEEETTTT
T ss_pred EEEEEcCCCc
Confidence 9999996543
No 59
>2kpn_A Bacillolysin; solution structure, BIG_3 domain, PF07523, PSI BIG-open NESG, cell WALL, hydrolase, peptidoglycan-anchor; NMR {Bacillus cereus atcc 14579}
Probab=92.06 E-value=0.37 Score=31.55 Aligned_cols=55 Identities=16% Similarity=0.250 Sum_probs=43.0
Q ss_pred eEEeCCceE----EEECCcCCcCCCCeEEEEEEEEeCCCCceEEEEEEEEeecCCCCCc
Q psy11061 16 FYMKSVSGE----ICIAQDLDFESRSSYEFPVVATDRGGLSTTAMVRIQITDVNDNEPI 70 (212)
Q Consensus 16 F~id~~tg~----i~~~~~lD~E~~~~~~l~i~a~d~~~~~~~~~v~i~V~d~nd~~P~ 70 (212)
=..|...|. |.+...+|......|.++..+.|..|...++..+|.|.+..+..|.
T Consensus 34 tA~D~~DGDlT~~I~V~g~Vdt~k~G~Y~VtY~VtDs~Gn~~t~trtVtV~~~~e~~~~ 92 (103)
T 2kpn_A 34 LAIDKEDGDLTSKIKVDGEVDTTKAGTYVLTYTVTDSKGHEVTAKQTVTVKVREEVKND 92 (103)
T ss_dssp EEECSSSCBCGGGCEEESCCCSSSCEEEEEEEEEECTTSCEEEEEEEEEEECSSCCCCC
T ss_pred EEEcCCCCCcceeEEEeCcccCCCceEEEEEEEEEcCCCCEEEEEEEEEEeCCCcccCC
Confidence 355555554 4566778988899999999999999988899999999887655443
No 60
>2yrl_A KIAA1837 protein; PKD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=90.42 E-value=0.84 Score=29.64 Aligned_cols=58 Identities=16% Similarity=0.245 Sum_probs=36.8
Q ss_pred eEEEEEEcCCCCCcEEEe-CCccEEEEeeecCCCCCCeEEEEEEEEECCCCCeeeeEEEEEEEeeCC
Q psy11061 105 TISYKIVTGKDANLFRID-RSSGELFVTRGNFLSRSNSYHINVSAMDGGGNKCSQDAQVNINIINSH 170 (212)
Q Consensus 105 ~i~y~i~~~~~~~~F~id-~~~G~i~~~~~~~ld~~~~~~l~v~a~D~~~~~~~~~~~v~I~v~d~n 170 (212)
.+.|++..|... ..+. .....+..... ..+.|.|++.|+|..+. +++.++.|+|...+
T Consensus 39 sY~W~~~~Gp~~--~~l~~~~~~~~~~t~~----~~G~y~f~LTVtD~~G~--s~s~~v~VtV~~~~ 97 (102)
T 2yrl_A 39 SYLWEKTQGPDG--VQLENANSSVATVTGL----QVGTYVFTLTVKDERNL--QSQSSVNVIVKEES 97 (102)
T ss_dssp CCCEEEEESCTT--CEEESTTSSEEEEESC----CSSEEEEEEEEEBTTCC--EEEEEEEEEEECCS
T ss_pred EEEEEECCCCce--eEEccCCCccEEEECC----CCeEEEEEEEEEeCCCC--EEEeEEEEEEcCCC
Confidence 456666665421 2332 22233333332 67899999999998774 46788888888766
No 61
>3rb5_A Na/Ca exchange protein; CBD12, calcium binding and regulation, metal binding protein; 2.35A {Drosophila melanogaster} PDB: 3rb7_A 3e9u_A
Probab=89.17 E-value=5.1 Score=31.36 Aligned_cols=125 Identities=14% Similarity=0.218 Sum_probs=58.5
Q ss_pred cCCCCeEEEEEEEEeCCC-CceEEEEEEEEeecCCCCCccCCCceEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEE
Q psy11061 33 FESRSSYEFPVVATDRGG-LSTTAMVRIQITDVNDNEPIFNPVEYNVSLRDDIQTTTAFAVVLATDRDSDRFGTISYKIV 111 (212)
Q Consensus 33 ~E~~~~~~l~i~a~d~~~-~~~~~~v~i~V~d~nd~~P~f~~~~~~~~v~e~~~~g~~v~~~~a~D~D~~~~~~i~y~i~ 111 (212)
+|..+.|.+.+..-..+. +......+|.|.| ||++|.|....-...|.|+. |...+.+.-...- ...-.+.|...
T Consensus 87 ~E~dEtF~v~Ls~p~~~a~lg~~~~atvtI~d-dD~~g~~~f~~~~~~V~E~~--g~~~~~V~Rs~~~-~g~vtV~~~T~ 162 (298)
T 3rb5_A 87 FEEDECFYIRLFNPSEGVKLAVPMIATVMILD-DDHAGIFAFTDSVFEITESV--GRFELKVMRYSGA-RGTVIVPYWTE 162 (298)
T ss_dssp CCCCEEEEEEEECCCTTCCBCSCSEEEEEEEC-CCCCCEEECSCSEEEECTTC--CCEEEEEEEESCC-CSCEEEEEEEE
T ss_pred ccCcEEEEEEEeCCCCCcEECCCceEEEEEec-cccccccccccccEEeecCC--ceEEEEEEEEecC-CCCEEEEEEec
Confidence 344555666554332221 2233345556666 56688876665677888874 5666666655432 22336788876
Q ss_pred cCCCCCcEEEeCCccEEEEeeecCCCCCCeEEEEEEEEECCCCCeeeeEEEEEEEee
Q psy11061 112 TGKDANLFRIDRSSGELFVTRGNFLSRSNSYHINVSAMDGGGNKCSQDAQVNINIIN 168 (212)
Q Consensus 112 ~~~~~~~F~id~~~G~i~~~~~~~ld~~~~~~l~v~a~D~~~~~~~~~~~v~I~v~d 168 (212)
.|....--...+.+|.|.... ....-.+.|.+.|..-.. ..-++.|.+.+
T Consensus 163 dGTA~~g~Dy~~~~gtltF~~-----Get~kti~V~IidD~~~E--~dEtF~v~Ls~ 212 (298)
T 3rb5_A 163 NDTATESKDYEGARGELVFEN-----NESEKFIDLFILEESSYE--KDVSFKVHIGE 212 (298)
T ss_dssp EC-----CCSCCCEEEEEECT-----TCCEEEEEEC-----------CEEEEEEECC
T ss_pred CCccCCCccceecccEEEECC-----CCEEEEEEEEEeCCCccc--CceEEEEEEcC
Confidence 664311000012345555322 234455666666543222 23445555543
No 62
>3rb5_A Na/Ca exchange protein; CBD12, calcium binding and regulation, metal binding protein; 2.35A {Drosophila melanogaster} PDB: 3rb7_A 3e9u_A
Probab=88.82 E-value=7.2 Score=30.50 Aligned_cols=127 Identities=13% Similarity=0.156 Sum_probs=59.6
Q ss_pred CCCCCccCCCceEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEcCCCC--CcEEEeCCccEEEEeee--------c
Q psy11061 65 NDNEPIFNPVEYNVSLRDDIQTTTAFAVVLATDRDSDRFGTISYKIVTGKDA--NLFRIDRSSGELFVTRG--------N 134 (212)
Q Consensus 65 nd~~P~f~~~~~~~~v~e~~~~g~~v~~~~a~D~D~~~~~~i~y~i~~~~~~--~~F~id~~~G~i~~~~~--------~ 134 (212)
+|+++.|....-...|.|+. |.....+.-.. +......+.|....|... .-|. +.+|.|..... .
T Consensus 6 dd~~g~i~F~~~~y~V~E~~--g~v~vtV~R~g-~~~~~vtV~y~T~~GTA~ag~Dy~--~~~gtl~F~~Get~kti~V~ 80 (298)
T 3rb5_A 6 ADDPIRMYFEPGHYTVMENC--GEFEVRVVRRG-DISTYASVEYETQDGTASAGTDFV--GRKGLLSFPPGVDEQRFRIE 80 (298)
T ss_dssp -----CEEESSSEEEEETTS--CCEECCEEECS-CCSSCEEEEEEEEESSSCBTTTBC--CCEEEEEECTTCCEECCEEC
T ss_pred CCCceEEEEeCCEEEEecCc--eEEEEEEEEEC-CCCccEEEEEEeeCCccCCCCCcc--ccceEEEECCCceEEEEEEE
Confidence 45566666666677888874 45545554433 333344688887766421 1111 11233222111 0
Q ss_pred CCC---CCCeEEEEEEEEECC-CCCeeeeEEEEEEEeeCCCCCCeEecCceEEEEeCCCCCCeEEEEEE
Q psy11061 135 FLS---RSNSYHINVSAMDGG-GNKCSQDAQVNINIINSHMPIPLFQQSTYSFVVPEDVFKNSIVGTIK 199 (212)
Q Consensus 135 ~ld---~~~~~~l~v~a~D~~-~~~~~~~~~v~I~v~d~nd~~P~f~~~~~~~~v~e~~~~g~~v~~v~ 199 (212)
.++ ..+.-+|.|..++.. +.........+|+|.| ||.+|.|.-..-...|.|+. |...++|.
T Consensus 81 I~dD~~~E~dEtF~v~Ls~p~~~a~lg~~~~atvtI~d-dD~~g~~~f~~~~~~V~E~~--g~~~~~V~ 146 (298)
T 3rb5_A 81 VIDDDVFEEDECFYIRLFNPSEGVKLAVPMIATVMILD-DDHAGIFAFTDSVFEITESV--GRFELKVM 146 (298)
T ss_dssp BCCCSSCCCCEEEEEEEECCCTTCCBCSCSEEEEEEEC-CCCCCEEECSCSEEEECTTC--CCEEEEEE
T ss_pred EeCCCCccCcEEEEEEEeCCCCCcEECCCceEEEEEec-cccccccccccccEEeecCC--ceEEEEEE
Confidence 012 222334444445432 2222222345566666 46789876554467788874 55544444
No 63
>2yrl_A KIAA1837 protein; PKD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=88.73 E-value=1.1 Score=28.98 Aligned_cols=32 Identities=16% Similarity=0.365 Sum_probs=28.4
Q ss_pred CCCeEEEEEEEEeCCCCceEEEEEEEEeecCC
Q psy11061 35 SRSSYEFPVVATDRGGLSTTAMVRIQITDVND 66 (212)
Q Consensus 35 ~~~~~~l~i~a~d~~~~~~~~~v~i~V~d~nd 66 (212)
....|.|++.|+|..+.+.+..+.|.|...+.
T Consensus 67 ~~G~y~f~LTVtD~~G~s~s~~v~VtV~~~~~ 98 (102)
T 2yrl_A 67 QVGTYVFTLTVKDERNLQSQSSVNVIVKEESG 98 (102)
T ss_dssp CSSEEEEEEEEEBTTCCEEEEEEEEEEECCSS
T ss_pred CCeEEEEEEEEEeCCCCEEEeEEEEEEcCCCC
Confidence 46799999999999999999999999997655
No 64
>2yhg_A SDE_182CT, cellulose-binding protein; hydrolase, glycoside hydrolase; HET: BTB; 1.08A {Saccharophagus degradans}
Probab=88.15 E-value=7.8 Score=32.03 Aligned_cols=65 Identities=23% Similarity=0.230 Sum_probs=41.7
Q ss_pred eCCCCCCceEEEEE--EcCCC--CCcEEEe-CCccEEEEeeecCCC-CCCeEEEEEEEEECCCCCeeeeEEEEEEE
Q psy11061 97 DRDSDRFGTISYKI--VTGKD--ANLFRID-RSSGELFVTRGNFLS-RSNSYHINVSAMDGGGNKCSQDAQVNINI 166 (212)
Q Consensus 97 D~D~~~~~~i~y~i--~~~~~--~~~F~id-~~~G~i~~~~~~~ld-~~~~~~l~v~a~D~~~~~~~~~~~v~I~v 166 (212)
|+| +..++|+= ..+.. .....|. .....+....+ -. ....|.|++.|+|.+.|..++...|.|+|
T Consensus 366 DPD---GD~LtY~W~q~~g~g~~~~~vtls~~~~~~~sft~P--~~~~~~tl~f~LtVTD~~~p~lTs~~rViVtV 436 (437)
T 2yhg_A 366 DPD---GDSLNYSWSHYGEADSYSGSVSISNSSSASANVQIP--SNAGGKDIHILLTLRDNGSPNLYAYRRVVINV 436 (437)
T ss_dssp CTT---CCCEEEEEEECTTTSSCCSCCCEETTTSSEEEEECC--TTCTTCEEEEEEEEEECSSSCCEEEEEEEEEE
T ss_pred CCC---CCeEEEEEEEeCCCCccccceEeecCCCceEEEEeC--CCCCCcEEEEEEEEEeCCCCCccEEeEEEEEe
Confidence 666 33355544 33321 1234553 34456666665 33 77899999999999977777777777776
No 65
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=86.38 E-value=2.3 Score=37.42 Aligned_cols=77 Identities=16% Similarity=0.269 Sum_probs=48.3
Q ss_pred EEEEEeCCCCCCceEEEEEEcCCCCCcEEEeCCccEEEEeeecCCCCCCeEEEEEEEEECCCCCeeeeEEEEEEEeeCCC
Q psy11061 92 VVLATDRDSDRFGTISYKIVTGKDANLFRIDRSSGELFVTRGNFLSRSNSYHINVSAMDGGGNKCSQDAQVNINIINSHM 171 (212)
Q Consensus 92 ~~~a~D~D~~~~~~i~y~i~~~~~~~~F~id~~~G~i~~~~~~~ld~~~~~~l~v~a~D~~~~~~~~~~~v~I~v~d~nd 171 (212)
.+.|-+--.+...+..|+|. |-...+..+......+..+. | ..+.|+|.|+|++..+.+....+++.|.|
T Consensus 677 ~f~~l~y~~~~~~~y~Y~L~-G~d~~W~~~~~~~~~~~ytn---L-~pG~Y~f~V~a~~~~g~w~~~~~~l~I~I----- 746 (758)
T 3ott_A 677 ELSDLPYSLDEKNKFVYRLE-GMDKEWNFLKSNINRITYSN---L-SYGNYQLIISKLERDGQPSNRPHILNIRI----- 746 (758)
T ss_dssp EEECCCTTCSSCCCEEEEEE-TTCSSCEECCTTCCEEEECS---C-CSEEEEEEEEEBCTTSCBCSSCEEEEEEE-----
T ss_pred EEEcccCCCCccCeEEEEec-CCCCCccCCCCCcceEEecC---C-CCccEEEEEEEeCCCCCccCccEEEEEEE-----
Confidence 34444443444557888885 33345655532333443222 1 68999999999998877655567888988
Q ss_pred CCCeEec
Q psy11061 172 PIPLFQQ 178 (212)
Q Consensus 172 ~~P~f~~ 178 (212)
.||.++.
T Consensus 747 ~Pp~~~~ 753 (758)
T 3ott_A 747 LPPWLEH 753 (758)
T ss_dssp CCGGGGG
T ss_pred CCcchhh
Confidence 4676543
No 66
>2y72_A Collagenase, collagenase G; polycystic kidney disease domain, beta barrel, collagen RECO domain, hydrolase; 1.18A {Clostridium histolyticum} PDB: 3jqu_A 3js7_A
Probab=84.89 E-value=2.3 Score=26.32 Aligned_cols=31 Identities=23% Similarity=0.438 Sum_probs=26.1
Q ss_pred CcCCCCeEEEEEEEEeCCCCceEEEEEEEEe
Q psy11061 32 DFESRSSYEFPVVATDRGGLSTTAMVRIQIT 62 (212)
Q Consensus 32 D~E~~~~~~l~i~a~d~~~~~~~~~v~i~V~ 62 (212)
-|.....|.+++.+.|..|...+..+.|.|.
T Consensus 54 ty~~~G~Y~v~LtVtd~~G~~~t~~~~V~V~ 84 (85)
T 2y72_A 54 AYKKAGTYNVTLKVTDDKGATATESFTIEIK 84 (85)
T ss_dssp ECSSCEEEEEEEEEEETTSCEEEEEEEEEEE
T ss_pred EcCCCeEEEEEEEEEECCCCEEEEEEEEEEc
Confidence 4556789999999999988888888888875
No 67
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=84.74 E-value=8.8 Score=33.90 Aligned_cols=78 Identities=15% Similarity=0.214 Sum_probs=48.0
Q ss_pred EEEEEEeCCCCCCceEEEEEEcCCCCCcEEEeCCccEEEEeeecCCCCCCeEEEEEEEEECCCCCeeeeEEEEEEEeeCC
Q psy11061 91 AVVLATDRDSDRFGTISYKIVTGKDANLFRIDRSSGELFVTRGNFLSRSNSYHINVSAMDGGGNKCSQDAQVNINIINSH 170 (212)
Q Consensus 91 ~~~~a~D~D~~~~~~i~y~i~~~~~~~~F~id~~~G~i~~~~~~~ld~~~~~~l~v~a~D~~~~~~~~~~~v~I~v~d~n 170 (212)
+.+.|-+-..+...+..|+|. |-...+-... ....+..+.- ..+.|+|.|+|++..+.+....+++.|.|
T Consensus 711 i~fs~l~y~~~~~~~y~YrL~-G~d~~W~~~~-~~~~~~ytnL----~pG~Y~f~V~a~n~~g~w~~~~~~l~i~I---- 780 (795)
T 4a2l_A 711 IEFVVSNYISGQHNTFAYKLE-GYDKEWYYLT-DSRTVSYSNL----PQGTYQFLVKAANSDGKWNPIPTALEIIV---- 780 (795)
T ss_dssp EEEEECCTTTTTCCEEEEEEE-TTCSSCEEES-SCCEEEEECC----CSEEEEEEEEEECTTSCBCSSCEEEEEEE----
T ss_pred EEEEEccCCCccccEEEEEEe-CCCCCccCCC-CcCeEEeccc----CCCeEEEEEEEECCCCccCCCceEEEEEE----
Confidence 444554444455667889985 4344565553 3334433221 68999999999998876544567888888
Q ss_pred CCCCeEecC
Q psy11061 171 MPIPLFQQS 179 (212)
Q Consensus 171 d~~P~f~~~ 179 (212)
.||.+..+
T Consensus 781 -~Ppww~t~ 788 (795)
T 4a2l_A 781 -LPIWYKTL 788 (795)
T ss_dssp -CCCC----
T ss_pred -ECCcccCc
Confidence 47776544
No 68
>2kpn_A Bacillolysin; solution structure, BIG_3 domain, PF07523, PSI BIG-open NESG, cell WALL, hydrolase, peptidoglycan-anchor; NMR {Bacillus cereus atcc 14579}
Probab=78.70 E-value=4.9 Score=26.08 Aligned_cols=34 Identities=12% Similarity=0.315 Sum_probs=26.1
Q ss_pred CC--CCCeEEEEEEEEECCCCCeeeeEEEEEEEeeCCC
Q psy11061 136 LS--RSNSYHINVSAMDGGGNKCSQDAQVNINIINSHM 171 (212)
Q Consensus 136 ld--~~~~~~l~v~a~D~~~~~~~~~~~v~I~v~d~nd 171 (212)
.| ..+.|.++..++|..|.. ++++.+|+|.+...
T Consensus 53 Vdt~k~G~Y~VtY~VtDs~Gn~--~t~trtVtV~~~~e 88 (103)
T 2kpn_A 53 VDTTKAGTYVLTYTVTDSKGHE--VTAKQTVTVKVREE 88 (103)
T ss_dssp CCSSSCEEEEEEEEEECTTSCE--EEEEEEEEEECSSC
T ss_pred ccCCCceEEEEEEEEEcCCCCE--EEEEEEEEEeCCCc
Confidence 55 789999999999988754 45677777776543
No 69
>1u2c_A Dystroglycan; IG-like domain, S6 like fold, protein binding; 2.30A {Mus musculus} SCOP: b.1.6.2 d.272.1.1
Probab=75.92 E-value=21 Score=26.93 Aligned_cols=68 Identities=18% Similarity=0.038 Sum_probs=42.5
Q ss_pred EEEEEEc--C-CCCCcEEEeCCccEEEEeeecCCCCCCeEEEEEEEEECC--C-CCeeeeEEEEEEEeeCCCCCCe
Q psy11061 106 ISYKIVT--G-KDANLFRIDRSSGELFVTRGNFLSRSNSYHINVSAMDGG--G-NKCSQDAQVNINIINSHMPIPL 175 (212)
Q Consensus 106 i~y~i~~--~-~~~~~F~id~~~G~i~~~~~~~ld~~~~~~l~v~a~D~~--~-~~~~~~~~v~I~v~d~nd~~P~ 175 (212)
.+|++.. | .-+.|...|+.++.+.-... ....+.|.+.|.|++.+ + ....+.-.+.|.|...|.+-|.
T Consensus 33 ~~y~vt~a~g~~LPsWL~fd~~t~TfsG~P~--~~D~G~~~i~VtA~~~~~~g~~~~~asdvF~I~V~ped~~ep~ 106 (246)
T 1u2c_A 33 EIIKVSAAGKEALPSWLHWDPHSHILEGLPL--DTDKGVHYISVSAARLGANGSHVPQTSSVFSIEVYPEDHNEPQ 106 (246)
T ss_dssp EEEEEEETTSSSCCTTEEEETTTTEEEECCC--GGGCEEEEEEEEEEEECTTSCEEEEEEEEEEEEEESSCCC---
T ss_pred cEEEEEecCCCCCCcceEEcCCCCeEEeccC--CCCcceEEEEEEEeeccCCCCccccccceEEEEEecCCCcchh
Confidence 4555442 3 23579999999997765443 33789999999999763 2 2233456788888844433354
No 70
>2y72_A Collagenase, collagenase G; polycystic kidney disease domain, beta barrel, collagen RECO domain, hydrolase; 1.18A {Clostridium histolyticum} PDB: 3jqu_A 3js7_A
Probab=74.84 E-value=6.1 Score=24.35 Aligned_cols=30 Identities=17% Similarity=0.416 Sum_probs=22.7
Q ss_pred CCCCCeEEEEEEEEECCCCCeeeeEEEEEEEe
Q psy11061 136 LSRSNSYHINVSAMDGGGNKCSQDAQVNINII 167 (212)
Q Consensus 136 ld~~~~~~l~v~a~D~~~~~~~~~~~v~I~v~ 167 (212)
+...+.|.+.+.|+|..+.. .+.++.|.|.
T Consensus 55 y~~~G~Y~v~LtVtd~~G~~--~t~~~~V~V~ 84 (85)
T 2y72_A 55 YKKAGTYNVTLKVTDDKGAT--ATESFTIEIK 84 (85)
T ss_dssp CSSCEEEEEEEEEEETTSCE--EEEEEEEEEE
T ss_pred cCCCeEEEEEEEEEECCCCE--EEEEEEEEEc
Confidence 44789999999999987754 4566666664
No 71
>2yhg_A SDE_182CT, cellulose-binding protein; hydrolase, glycoside hydrolase; HET: BTB; 1.08A {Saccharophagus degradans}
Probab=74.21 E-value=14 Score=30.59 Aligned_cols=59 Identities=15% Similarity=0.194 Sum_probs=39.6
Q ss_pred eEEEEcCCCCC---cCceEEe-CCceEEEECCcCCcCCCCeEEEEEEEEeCC--CCceEEEEEEEE
Q psy11061 2 VNYTLGESPSR---TNHFYMK-SVSGEICIAQDLDFESRSSYEFPVVATDRG--GLSTTAMVRIQI 61 (212)
Q Consensus 2 i~Y~i~~~~~~---~~~F~id-~~tg~i~~~~~lD~E~~~~~~l~i~a~d~~--~~~~~~~v~i~V 61 (212)
++|+......+ .....|. +....++++.+-+ +....|.|.+.|+|.+ ++++...+.|+|
T Consensus 372 LtY~W~q~~g~g~~~~~vtls~~~~~~~sft~P~~-~~~~tl~f~LtVTD~~~p~lTs~~rViVtV 436 (437)
T 2yhg_A 372 LNYSWSHYGEADSYSGSVSISNSSSASANVQIPSN-AGGKDIHILLTLRDNGSPNLYAYRRVVINV 436 (437)
T ss_dssp EEEEEEECTTTSSCCSCCCEETTTSSEEEEECCTT-CTTCEEEEEEEEEECSSSCCEEEEEEEEEE
T ss_pred EEEEEEEeCCCCccccceEeecCCCceEEEEeCCC-CCCcEEEEEEEEEeCCCCCccEEeEEEEEe
Confidence 56777433211 1244564 3445677766644 4568999999999998 688888888877
No 72
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=72.35 E-value=10 Score=33.42 Aligned_cols=60 Identities=13% Similarity=0.184 Sum_probs=37.8
Q ss_pred CCCceEEEEEEcCCCCCcEEEeCCccEEEEeeecCCCCCCeEEEEEEEEECCCCCeeeeEEEEEEE
Q psy11061 101 DRFGTISYKIVTGKDANLFRIDRSSGELFVTRGNFLSRSNSYHINVSAMDGGGNKCSQDAQVNINI 166 (212)
Q Consensus 101 ~~~~~i~y~i~~~~~~~~F~id~~~G~i~~~~~~~ld~~~~~~l~v~a~D~~~~~~~~~~~v~I~v 166 (212)
+...+..|+|. |-...+-... ....+..+.- ..+.|+|.|+|++..+.+....+++.|.|
T Consensus 715 ~~~~~y~YrL~-G~d~~W~~~~-~~~~~~ytnL----~pG~Y~f~V~a~~~~g~w~~~~~~l~i~I 774 (781)
T 3v9f_A 715 ANQVEYAYMLK-GLENSWYTIN-EQNSVTFRNI----PPGKYEFLVKARLHNQDWSEDTTSLRIHI 774 (781)
T ss_dssp GGGEEEEEEEE-TTEEEEEEES-SCSEEEECSC----CSEEEEEEEEEEETTSCCCSCCEEEEEEE
T ss_pred ccccEEEEEec-CCCCCccCcC-CcceEEEcCC----CCceEEEEEEEECCCCccCCCceEEEEEE
Confidence 33446777875 3233444442 2234332221 68999999999998877555567788888
No 73
>3ead_A Na/Ca exchange protein; CBD1, calcium regulation, membrane, transmembrane, membrane; 2.25A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=69.67 E-value=23 Score=23.95 Aligned_cols=45 Identities=9% Similarity=0.110 Sum_probs=24.9
Q ss_pred CCCccCCCceEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEcCC
Q psy11061 67 NEPIFNPVEYNVSLRDDIQTTTAFAVVLATDRDSDRFGTISYKIVTGK 114 (212)
Q Consensus 67 ~~P~f~~~~~~~~v~e~~~~g~~v~~~~a~D~D~~~~~~i~y~i~~~~ 114 (212)
+.+.+....-...|.|+. |...+.+.-.. +......+.|....|.
T Consensus 3 ~~~~i~F~~~~y~V~E~~--g~~~v~V~R~g-~~~~~v~V~y~t~~gT 47 (137)
T 3ead_A 3 DPIRMYFEPGHYTVMENC--GEFEVRVVRRG-DISTYASVEYETQDGT 47 (137)
T ss_dssp --CEEEESSCEEEEEGGG--CEEEEEEEEES-CCSSCEEEEEEEECSS
T ss_pred CCEEEEEcCCEEEEECCC--eEEEEEEEEEC-CCCceEEEEEEeECCC
Confidence 344444444567778864 45555555443 3333446888887764
No 74
>2e7m_A Protein KIAA0319; PKD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=69.67 E-value=6.8 Score=25.85 Aligned_cols=57 Identities=11% Similarity=0.133 Sum_probs=36.1
Q ss_pred eEEEEEEcCCCCCcEEEe-CCccEEEEeeecCCCCCCeEEEEEEEEECCCCCeeeeEEEEEEEee
Q psy11061 105 TISYKIVTGKDANLFRID-RSSGELFVTRGNFLSRSNSYHINVSAMDGGGNKCSQDAQVNINIIN 168 (212)
Q Consensus 105 ~i~y~i~~~~~~~~F~id-~~~G~i~~~~~~~ld~~~~~~l~v~a~D~~~~~~~~~~~v~I~v~d 168 (212)
...|+++.+..+..-.|. .+.+.+.+..- ..+.|.|+|.++|..+ .....++|+|..
T Consensus 48 syeWtli~gP~d~~~~~~~~~~~tlkLS~L----~eG~Y~FqltVtd~~~---~ge~~vnVTV~P 105 (113)
T 2e7m_A 48 NYEWNLISHPTDYQGEIKQGHKQTLNLSQL----SVGLYVFKVTVSSENA---FGEGFVNVTVKP 105 (113)
T ss_dssp CCBCCEEECCTTCCCCCCTTSSSEEEECSC----CSEEEEECCEEEETTE---EEECCEEEEEEC
T ss_pred eeEEEEecCCCCCceEEecCCCCeeEecCc----CcEEEEEEEEEECCCC---CccceEEEEEcC
Confidence 467788877332122232 34566665443 5799999999999875 345667777764
No 75
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=65.61 E-value=12 Score=23.89 Aligned_cols=72 Identities=15% Similarity=0.159 Sum_probs=40.2
Q ss_pred cEEEEEEEEeCCCCCCceEEEEEEcCCCCCcEEEeCCccEEEEeeecCCCCCCeEEEEEEEEECCCCCeeeeEEEEEEEe
Q psy11061 88 TAFAVVLATDRDSDRFGTISYKIVTGKDANLFRIDRSSGELFVTRGNFLSRSNSYHINVSAMDGGGNKCSQDAQVNINII 167 (212)
Q Consensus 88 ~~v~~~~a~D~D~~~~~~i~y~i~~~~~~~~F~id~~~G~i~~~~~~~ld~~~~~~l~v~a~D~~~~~~~~~~~v~I~v~ 167 (212)
...+...|.|.|. .-.++.|.+.. .....+.. ........ . ..+.|+|.++|+|..|... ....|.|.|.
T Consensus 18 ~v~i~a~A~D~dg-~V~kVef~vdg----~~vg~dt~-apy~~~w~--~-~~G~htl~a~AtD~~G~~~-tS~~v~vtV~ 87 (98)
T 3pe9_A 18 FLKITATASDSDG-KISRVDFLVDG----EVIGSDRE-APYEYEWK--A-VEGNHEISVIAYDDDDAAS-TPDSVKIFVK 87 (98)
T ss_dssp EEEEEEEECCSSS-CEEEEEEEETT----EEEEEECS-SSEEEEEE--C-CSEEEEEEEEEEETTCCBC-CCEEEEEEEE
T ss_pred EEEEEEEEEeCCC-CEEEEEEEECC----EEeccccc-CCEEEEEE--c-CCccEEEEEEEEECCCCEE-eeeEEEEEEC
Confidence 4456677777653 23356766632 12222211 11111111 1 3689999999999987653 2466777776
Q ss_pred eC
Q psy11061 168 NS 169 (212)
Q Consensus 168 d~ 169 (212)
+.
T Consensus 88 ~~ 89 (98)
T 3pe9_A 88 QA 89 (98)
T ss_dssp CC
T ss_pred ch
Confidence 53
No 76
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=65.57 E-value=35 Score=24.49 Aligned_cols=59 Identities=15% Similarity=0.237 Sum_probs=36.8
Q ss_pred CCCeEEEEEEEEECCCCCeeeeEEEEEEEeeCCCCCCeEecCceEEEEeCCCC----CCeEEEEEEEEeCC
Q psy11061 138 RSNSYHINVSAMDGGGNKCSQDAQVNINIINSHMPIPLFQQSTYSFVVPEDVF----KNSIVGTIKAATSD 204 (212)
Q Consensus 138 ~~~~~~l~v~a~D~~~~~~~~~~~v~I~v~d~nd~~P~f~~~~~~~~v~e~~~----~g~~v~~v~a~D~D 204 (212)
..+.|.|+++|+|..|.... ...+.|.|.+ ..+|... +..+.+.. .+.+-++..|.|.|
T Consensus 59 ~~G~htlta~A~D~aGn~s~-s~~v~vtV~~--~~~Ptv~-----itsP~~g~~~~~~~~vtl~~~AsD~~ 121 (190)
T 3pdd_A 59 AVGAYNLKAVAVLSDGRRIE-SPVTPVLVKV--IVKPTVK-----LTAPKSNVVAYGNEFLKITATASDSD 121 (190)
T ss_dssp CSEEEEEEEEEEETTSCEEE-CCCEEEEEEC--CCCCEEE-----EEECCTTCCCBTTSEEEEEEEEECSS
T ss_pred CCccEEEEEEEEECCCCEee-ecceeEEecc--CCCCcee-----ecCCCCCcEEecCCeEEEEEEEECCC
Confidence 57899999999998876432 2346777765 3677542 22222221 23455777788765
No 77
>3us9_A Sodium/calcium exchanger 1; beta-sandwich, calcium binding protein, intracellular, metal protein; 2.68A {Canis lupus familiaris} PDB: 2klt_A
Probab=61.13 E-value=56 Score=25.36 Aligned_cols=56 Identities=23% Similarity=0.278 Sum_probs=33.8
Q ss_pred EEEEEEEeecCCCCCccCCCceEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEcCC
Q psy11061 55 AMVRIQITDVNDNEPIFNPVEYNVSLRDDIQTTTAFAVVLATDRDSDRFGTISYKIVTGK 114 (212)
Q Consensus 55 ~~v~i~V~d~nd~~P~f~~~~~~~~v~e~~~~g~~v~~~~a~D~D~~~~~~i~y~i~~~~ 114 (212)
...+|.|.| ||++|.|....-...|.|+. |...+.+.-+.. ....-.+.|+...|.
T Consensus 128 ~~atVtI~D-dD~agv~sf~~~~~~V~E~~--G~~~v~V~Rs~~-~~g~VtV~y~T~~GT 183 (295)
T 3us9_A 128 STATVTIFD-DDHAGIFTFEEPVTHVSESI--GIMEVKVLRTSG-ARGNVIVPYKTIEGT 183 (295)
T ss_dssp CEEEEEEEC-CCCCCEEEESCSEEEEESCS--SEEEEEEEEESC-CCSCEEEEEEEECCS
T ss_pred ceeEEEEcc-cccccccccCCCeEEEecCC--CeEEEEEEEEcC-CCccEEEEEEecCCC
Confidence 445566666 46688765555577788873 555556554432 222335788877664
No 78
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}
Probab=60.67 E-value=38 Score=23.26 Aligned_cols=19 Identities=32% Similarity=0.443 Sum_probs=15.7
Q ss_pred CCCCCeEEEEEEEEECCCC
Q psy11061 136 LSRSNSYHINVSAMDGGGN 154 (212)
Q Consensus 136 ld~~~~~~l~v~a~D~~~~ 154 (212)
|.....|.+.|.|.+..|.
T Consensus 165 L~p~t~Y~~~V~A~n~~G~ 183 (197)
T 3lpw_A 165 LIQGEEYSFRVSAQNEKGI 183 (197)
T ss_dssp CCTTCEEEEEEEEEETTEE
T ss_pred cCCCCEEEEEEEEEeCCcc
Confidence 5577899999999998754
No 79
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=58.79 E-value=18 Score=23.05 Aligned_cols=28 Identities=25% Similarity=0.341 Sum_probs=22.5
Q ss_pred CCeEEEEEEEEeCCCCc-eEEEEEEEEee
Q psy11061 36 RSSYEFPVVATDRGGLS-TTAMVRIQITD 63 (212)
Q Consensus 36 ~~~~~l~i~a~d~~~~~-~~~~v~i~V~d 63 (212)
...|.|.++|.|..|.. .+..+.|.|.+
T Consensus 60 ~G~htl~a~AtD~~G~~~tS~~v~vtV~~ 88 (98)
T 3pe9_A 60 EGNHEISVIAYDDDDAASTPDSVKIFVKQ 88 (98)
T ss_dssp SEEEEEEEEEEETTCCBCCCEEEEEEEEC
T ss_pred CccEEEEEEEEECCCCEEeeeEEEEEECc
Confidence 57899999999997744 57788888874
No 80
>1op4_A Neural-cadherin; beta sandwich, cadherin-like domain, cell adhesion; NMR {Mus musculus} SCOP: b.1.6.1
Probab=54.37 E-value=53 Score=23.00 Aligned_cols=44 Identities=14% Similarity=0.280 Sum_probs=30.0
Q ss_pred ceEEeCCceEEEECCcCCcCCCCeEEEEEEEEeCC-CCceEEEEEEE
Q psy11061 15 HFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRG-GLSTTAMVRIQ 60 (212)
Q Consensus 15 ~F~id~~tg~i~~~~~lD~E~~~~~~l~i~a~d~~-~~~~~~~v~i~ 60 (212)
.|.|++ .|.|.+++++-.-. ..-.|.|.|.|.. +....+.|.+.
T Consensus 78 dFkV~~-DGtVya~r~v~L~~-~~~~F~V~a~D~~t~~~~~i~V~L~ 122 (159)
T 1op4_A 78 DFKVDE-DGTVYAVRSFPLTA-EQAKFLIYAQDKETQEKWQVAVNLS 122 (159)
T ss_dssp EEEEET-TTEEEEESCCSCSS-SCEEEEEEEEETTTTEEEEEEEEEC
T ss_pred CeEEeC-CCcEEEecceeecC-CCcEEEEEEEcCCCceEEEEEEEEe
Confidence 799998 89999998864332 3458899999954 33444444433
No 81
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=53.38 E-value=34 Score=29.88 Aligned_cols=61 Identities=20% Similarity=0.313 Sum_probs=36.2
Q ss_pred eEEEEcCCCCCcCceEEeCCceEEEECCcCCcCCCCeEEEEEEEEeCCCC--ceEEEEEEEEeecCCCCCccCC
Q psy11061 2 VNYTLGESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRGGL--STTAMVRIQITDVNDNEPIFNP 73 (212)
Q Consensus 2 i~Y~i~~~~~~~~~F~id~~tg~i~~~~~lD~E~~~~~~l~i~a~d~~~~--~~~~~v~i~V~d~nd~~P~f~~ 73 (212)
..|+|..-+ ..|-.+......++.+.- ....|+|.|+|.+..+. .....+.|.|. ||...+
T Consensus 691 y~Y~L~G~d--~~W~~~~~~~~~~~ytnL----~pG~Y~f~V~a~~~~g~w~~~~~~l~I~I~-----Pp~~~~ 753 (758)
T 3ott_A 691 FVYRLEGMD--KEWNFLKSNINRITYSNL----SYGNYQLIISKLERDGQPSNRPHILNIRIL-----PPWLEH 753 (758)
T ss_dssp EEEEEETTC--SSCEECCTTCCEEEECSC----CSEEEEEEEEEBCTTSCBCSSCEEEEEEEC-----CGGGGG
T ss_pred EEEEecCCC--CCccCCCCCcceEEecCC----CCccEEEEEEEeCCCCCccCccEEEEEEEC-----Ccchhh
Confidence 356664322 245444333334443321 25789999999998753 45677888887 676654
No 82
>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=51.58 E-value=42 Score=21.07 Aligned_cols=20 Identities=30% Similarity=0.295 Sum_probs=16.8
Q ss_pred CCCCCeEEEEEEEEECCCCC
Q psy11061 136 LSRSNSYHINVSAMDGGGNK 155 (212)
Q Consensus 136 ld~~~~~~l~v~a~D~~~~~ 155 (212)
|.....|.|+|.|.+..+..
T Consensus 80 L~p~t~Y~~~V~A~n~~G~g 99 (118)
T 2yrz_A 80 LLPNHSYVFRVRAQSQEGWG 99 (118)
T ss_dssp CCTTCEEEEEEEEEESSCEE
T ss_pred CCCCCEEEEEEEEEcCCcCC
Confidence 66889999999999987644
No 83
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Probab=45.28 E-value=71 Score=21.81 Aligned_cols=19 Identities=21% Similarity=0.399 Sum_probs=15.5
Q ss_pred CCCCCeEEEEEEEEECCCC
Q psy11061 136 LSRSNSYHINVSAMDGGGN 154 (212)
Q Consensus 136 ld~~~~~~l~v~a~D~~~~ 154 (212)
|.....|.+.|.|...++.
T Consensus 154 L~p~t~Y~~~V~A~~~~g~ 172 (186)
T 1qr4_A 154 LVPGVDYNVNIISVKGFEE 172 (186)
T ss_dssp CCSSCEEEEEEEEEETTEE
T ss_pred CCCCCEEEEEEEEEcCCCc
Confidence 5578899999999887653
No 84
>3gin_A Sodium/calcium exchanger 1; CBD1, CBD2, NCX, calcium binding domain 1, antiport, calcium transport, calmodulin-binding, cell membrane; 2.40A {Canis lupus familiaris} PDB: 2dpk_A* 2fws_A
Probab=44.32 E-value=78 Score=22.03 Aligned_cols=58 Identities=7% Similarity=0.020 Sum_probs=29.0
Q ss_pred EEEEEEEeecCCCCCccCCCceEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEcCCC
Q psy11061 55 AMVRIQITDVNDNEPIFNPVEYNVSLRDDIQTTTAFAVVLATDRDSDRFGTISYKIVTGKD 115 (212)
Q Consensus 55 ~~v~i~V~d~nd~~P~f~~~~~~~~v~e~~~~g~~v~~~~a~D~D~~~~~~i~y~i~~~~~ 115 (212)
+.+.+.|.|-+. .+.|....-...|.|+. |.....+.-...+......+.|+...|..
T Consensus 10 ~~~~~~i~ddd~-~g~i~F~~~~y~V~E~~--G~v~vtV~R~~G~~~~~v~V~y~T~dGTA 67 (160)
T 3gin_A 10 AALEVLFQGPGP-VSKIFFEQGTYQCLENC--GTVALTIIRRGGDLTNTVFVDFRTEDGTA 67 (160)
T ss_dssp -----------C-EEEEEESCSEEEEETTS--SEEEEEEEEESSCTTSCEEEEEEEEESSS
T ss_pred ceEEEEEecCCC-ccEEEEeCCEEEEEcCc--EEEEEEEEEccCCCCcEEEEEEEEECCcc
Confidence 345556665333 56665555567788874 55555665554444334468998877743
No 85
>2c4x_A Endoglucanase, ctcel9D-CEL44A; cellulase ctcel9D-CEL44A, PKD domain, CBM44, carbohydrate BI module, beta-sandwich proteins, cellulosome; 2.0A {Clostridium thermocellum} PDB: 2c26_A
Probab=42.15 E-value=45 Score=25.40 Aligned_cols=34 Identities=21% Similarity=0.471 Sum_probs=28.2
Q ss_pred CCcCCCCeEEEEEEEEeCCCCceEEEEEEEEeec
Q psy11061 31 LDFESRSSYEFPVVATDRGGLSTTAMVRIQITDV 64 (212)
Q Consensus 31 lD~E~~~~~~l~i~a~d~~~~~~~~~v~i~V~d~ 64 (212)
.-|.....|.+++.|.|..|.+.+....|.|...
T Consensus 63 htY~~~GtYtVtLTVtD~~G~s~t~t~~ItV~~~ 96 (260)
T 2c4x_A 63 YKYKNPGTYKVKLIVTDNQGASSSFTATIKVTSA 96 (260)
T ss_dssp ECCSSCEEEEEEEEEEETTSCEEEEEEEEEEBCS
T ss_pred EEeCCCEEEEEEEEEEeCCCCeEEEEEEEEECCC
Confidence 4566778999999999998887788888888764
No 86
>1u2c_A Dystroglycan; IG-like domain, S6 like fold, protein binding; 2.30A {Mus musculus} SCOP: b.1.6.2 d.272.1.1
Probab=41.97 E-value=1.1e+02 Score=23.07 Aligned_cols=63 Identities=16% Similarity=0.100 Sum_probs=41.7
Q ss_pred eEEEEc--CCCCCcCceEEeCCceEEEECCcCCcCCCCeEEEEEEEEeCC-----CCceEEEEEEEEe--ecCC
Q psy11061 2 VNYTLG--ESPSRTNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRG-----GLSTTAMVRIQIT--DVND 66 (212)
Q Consensus 2 i~Y~i~--~~~~~~~~F~id~~tg~i~~~~~lD~E~~~~~~l~i~a~d~~-----~~~~~~~v~i~V~--d~nd 66 (212)
.+|++. .+..-+.|...|+.++.++=. |++ .....|.+.|.|.+.+ +..++..+.|.|. |.|+
T Consensus 33 ~~y~vt~a~g~~LPsWL~fd~~t~TfsG~-P~~-~D~G~~~i~VtA~~~~~~g~~~~~asdvF~I~V~ped~~e 104 (246)
T 1u2c_A 33 EIIKVSAAGKEALPSWLHWDPHSHILEGL-PLD-TDKGVHYISVSAARLGANGSHVPQTSSVFSIEVYPEDHNE 104 (246)
T ss_dssp EEEEEEETTSSSCCTTEEEETTTTEEEEC-CCG-GGCEEEEEEEEEEEECTTSCEEEEEEEEEEEEEESSCCC-
T ss_pred cEEEEEecCCCCCCcceEEcCCCCeEEec-cCC-CCcceEEEEEEEeeccCCCCccccccceEEEEEecCCCcc
Confidence 356663 344566899999999966543 333 2346799999998652 2345677888888 5555
No 87
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Probab=38.10 E-value=76 Score=22.06 Aligned_cols=19 Identities=26% Similarity=0.361 Sum_probs=15.9
Q ss_pred CCCCCeEEEEEEEEECCCC
Q psy11061 136 LSRSNSYHINVSAMDGGGN 154 (212)
Q Consensus 136 ld~~~~~~l~v~a~D~~~~ 154 (212)
|.....|.++|.|.+..|.
T Consensus 171 L~p~t~Y~~~V~A~n~~G~ 189 (205)
T 1cfb_A 171 QPTFVKYLIKVVAINDRGE 189 (205)
T ss_dssp CCSSCEEEEEEEEEETTEE
T ss_pred CCCCcEEEEEEEEEcCCCc
Confidence 5578899999999998754
No 88
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Probab=37.91 E-value=1e+02 Score=21.52 Aligned_cols=106 Identities=19% Similarity=0.216 Sum_probs=50.1
Q ss_pred CCCCeEEEEEEEEeCCCCceEEEEEEEEeecCCCCCccCCCceEEEEecCCCCCcEEEEEEEEeCCCCC-Cc-eEEEEEE
Q psy11061 34 ESRSSYEFPVVATDRGGLSTTAMVRIQITDVNDNEPIFNPVEYNVSLRDDIQTTTAFAVVLATDRDSDR-FG-TISYKIV 111 (212)
Q Consensus 34 E~~~~~~l~i~a~d~~~~~~~~~v~i~V~d~nd~~P~f~~~~~~~~v~e~~~~g~~v~~~~a~D~D~~~-~~-~i~y~i~ 111 (212)
+-...|.+.|.|...++.+....+... ..+| .+..+.+..... .+ ..+.-.-+..+. .+ .+.|+..
T Consensus 85 ~p~t~Y~~~V~a~~~~g~s~~~~~~t~-----~~~p----~P~~l~~~~~~~-~s--v~l~W~~p~~~~i~~Y~v~~~~~ 152 (203)
T 2gee_A 85 EPGIDYDISVYTVKNGGESTPTTLTQQ-----TAVP----PPTDLRFTNIGP-DT--MRVTWAPPPSIDLTNFLVRYSPV 152 (203)
T ss_dssp CTTCEEEEEEEEESSSCBCCCEEEEEE-----CCCC----CCEEEEEEEEET-TE--EEEEEECCSSCCCSEEEEEEEET
T ss_pred CCCCEEEEEEEEEeCCCccccEeeeec-----CCCc----CCCceEEEEcCC-CE--EEEEEcCCCCCCccEEEEEEEEC
Confidence 345689999999997765544443321 1133 123333332111 12 233333332211 11 2334332
Q ss_pred cCCCCCcEE--EeCCccEEEEeeecCCCCCCeEEEEEEEEECCCCC
Q psy11061 112 TGKDANLFR--IDRSSGELFVTRGNFLSRSNSYHINVSAMDGGGNK 155 (212)
Q Consensus 112 ~~~~~~~F~--id~~~G~i~~~~~~~ld~~~~~~l~v~a~D~~~~~ 155 (212)
.+. ..... +........+ .. |.....|.+.|.|.+..+..
T Consensus 153 ~~~-~~~~~~~~~~~~~~~~i-~~--L~p~t~Y~~~V~A~~~~g~s 194 (203)
T 2gee_A 153 KNE-EDVAELSISPSDNAVVL-TN--LLPGTEYVVSVSSVYEQHES 194 (203)
T ss_dssp TCG-GGCEEEEECTTCCEEEE-CS--CCTTCEEEEEEEEEETTEEC
T ss_pred CCC-CccEEEEcCCCcCEEEE-CC--CCCCCEEEEEEEEecCCCcC
Confidence 221 11222 2222222222 23 66788999999999977543
No 89
>2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=34.28 E-value=63 Score=20.90 Aligned_cols=20 Identities=25% Similarity=0.481 Sum_probs=17.4
Q ss_pred CCCCCeEEEEEEEEECCCCC
Q psy11061 136 LSRSNSYHINVSAMDGGGNK 155 (212)
Q Consensus 136 ld~~~~~~l~v~a~D~~~~~ 155 (212)
|.....|.|+|.|.+..|..
T Consensus 87 L~p~t~Y~frV~A~N~~G~~ 106 (127)
T 2dmk_A 87 LQSGTRYIFIVKAINQAGSR 106 (127)
T ss_dssp CCSSCEEEEEEEEEESSCEE
T ss_pred CCCCCEEEEEEEEEeCCCCC
Confidence 66889999999999988763
No 90
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=32.90 E-value=1.3e+02 Score=26.33 Aligned_cols=33 Identities=18% Similarity=0.364 Sum_probs=23.0
Q ss_pred CCeEEEEEEEEeCCCC--ceEEEEEEEEeecCCCCCccCC
Q psy11061 36 RSSYEFPVVATDRGGL--STTAMVRIQITDVNDNEPIFNP 73 (212)
Q Consensus 36 ~~~~~l~i~a~d~~~~--~~~~~v~i~V~d~nd~~P~f~~ 73 (212)
...|+|.|+|.+..+. ...+.+.|.|. ||-+..
T Consensus 753 pG~Y~f~V~a~n~~g~w~~~~~~l~i~I~-----Ppww~t 787 (795)
T 4a2l_A 753 QGTYQFLVKAANSDGKWNPIPTALEIIVL-----PIWYKT 787 (795)
T ss_dssp SEEEEEEEEEECTTSCBCSSCEEEEEEEC-----CCC---
T ss_pred CCeEEEEEEEECCCCccCCCceEEEEEEE-----CCcccC
Confidence 4789999999998763 34677888886 665543
No 91
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A
Probab=32.80 E-value=1.2e+02 Score=20.99 Aligned_cols=19 Identities=11% Similarity=0.361 Sum_probs=15.9
Q ss_pred CCCCCeEEEEEEEEECCCC
Q psy11061 136 LSRSNSYHINVSAMDGGGN 154 (212)
Q Consensus 136 ld~~~~~~l~v~a~D~~~~ 154 (212)
|.....|.++|.|.+..|.
T Consensus 181 L~p~t~Y~~~V~A~n~~G~ 199 (214)
T 2ibg_A 181 LETATMYEFKLQSFSAASA 199 (214)
T ss_dssp CCTTCEEEEEEEEECSSCB
T ss_pred CCCCCEEEEEEEEEcCCcc
Confidence 5678899999999997754
No 92
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=31.26 E-value=1.6e+02 Score=21.89 Aligned_cols=19 Identities=21% Similarity=0.406 Sum_probs=15.4
Q ss_pred CCCCCeEEEEEEEEECCCC
Q psy11061 136 LSRSNSYHINVSAMDGGGN 154 (212)
Q Consensus 136 ld~~~~~~l~v~a~D~~~~ 154 (212)
|.....|.|+|+|.+..+.
T Consensus 267 L~p~t~Y~~rV~A~n~~G~ 285 (303)
T 1i1r_A 267 LKPFTEYVFRIRCMKEDGK 285 (303)
T ss_dssp CCTTCEEEEEEEEEETTSC
T ss_pred CCCCCEEEEEEEeccCCCC
Confidence 5578899999999986543
No 93
>2jtd_A Myomesin-1, skelemin; immunoglobulin domain, muscle protein, thick filament, immune system, cell adhesion; NMR {Mus musculus}
Probab=30.53 E-value=1.3e+02 Score=20.35 Aligned_cols=77 Identities=17% Similarity=0.226 Sum_probs=49.8
Q ss_pred CccC-CCceEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEc----CCCCCcEEEeCCccEEEEeeecCCC-CCCeE
Q psy11061 69 PIFN-PVEYNVSLRDDIQTTTAFAVVLATDRDSDRFGTISYKIVT----GKDANLFRIDRSSGELFVTRGNFLS-RSNSY 142 (212)
Q Consensus 69 P~f~-~~~~~~~v~e~~~~g~~v~~~~a~D~D~~~~~~i~y~i~~----~~~~~~F~id~~~G~i~~~~~~~ld-~~~~~ 142 (212)
|..+ .+...+.|.|. |.+-+.++|.- ..+++.+.|-+-. ..+......|..+|.|.+.....-+ ..++|
T Consensus 37 P~IpLksel~vEiLEk---G~VRfWlQaek--lS~~a~~~~ifNdkei~~~~~~ki~fD~~tGiIEmime~~~~edeGTy 111 (142)
T 2jtd_A 37 PTVPTKSELAVEILEK---GQVRFWMQAEK--LSSNAKVSYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTY 111 (142)
T ss_dssp SSCSSSCEEEEEEETT---TEEEEEEECSC--CTTCCEEEEEETTEECCSSSSCCEEECSSSCCEEEEECCCCTTTCCEE
T ss_pred CcccchhhhhHHHHhc---CcEEEEEEhhh--cCCCceEEEEeccceeccCCCeeEeecccCChhhhhHhhcccccCceE
Confidence 4443 34577888876 66666666543 2357777776622 2334577888999999887764333 78888
Q ss_pred EEEEEEEECC
Q psy11061 143 HINVSAMDGG 152 (212)
Q Consensus 143 ~l~v~a~D~~ 152 (212)
+++++ |+.
T Consensus 112 T~Qlq--DGK 119 (142)
T 2jtd_A 112 TFQIQ--DGK 119 (142)
T ss_dssp EEEEE--ETT
T ss_pred EEEEe--cCc
Confidence 88774 543
No 94
>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=30.49 E-value=92 Score=18.77 Aligned_cols=20 Identities=30% Similarity=0.353 Sum_probs=16.4
Q ss_pred CCCCCeEEEEEEEEECCCCC
Q psy11061 136 LSRSNSYHINVSAMDGGGNK 155 (212)
Q Consensus 136 ld~~~~~~l~v~a~D~~~~~ 155 (212)
|.....|.|+|.|.+..+..
T Consensus 68 L~p~t~Y~~~V~A~n~~G~~ 87 (106)
T 2dju_A 68 LSPFSEYAFRVLAVNSIGRG 87 (106)
T ss_dssp CCTTCEEEEEEEEECSSCBC
T ss_pred CCCCcEEEEEEEEEeCCccC
Confidence 66788999999999976543
No 95
>2ptt_B Natural killer cell receptor 2B4; CD244, CD48, NK cell receptor, X-RAY, immune system; 1.63A {Mus musculus} PDB: 2ptu_A 1z2k_A
Probab=30.41 E-value=1.2e+02 Score=19.89 Aligned_cols=48 Identities=15% Similarity=0.263 Sum_probs=33.4
Q ss_pred cCceEEeCCceEEEECCcCCcCCCCeEEEEEEEEeCCCCceEEEEEEEEee
Q psy11061 13 TNHFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRGGLSTTAMVRIQITD 63 (212)
Q Consensus 13 ~~~F~id~~tg~i~~~~~lD~E~~~~~~l~i~a~d~~~~~~~~~v~i~V~d 63 (212)
.+.|.++..+|.|.+... -.|....|-|.| .+..|......+.+.|.|
T Consensus 65 k~r~~fd~~n~AL~I~~v-Q~eDSg~Y~LeV--t~~tG~v~~~~fql~VfD 112 (112)
T 2ptt_B 65 SDIYGFDYGDFALSIKSA-KLQDSGHYLLEI--TNTGGKVCNKNFQLLILD 112 (112)
T ss_dssp GGTEEECTTTCCEEESSC-CGGGCEEEEEEE--ECTTCBEEEEEEEEEEC-
T ss_pred CCEEEEecCCcEEEEEec-CcccCceEEEEE--ecCCCcEEEEEEEEEeeC
Confidence 367889988898887643 135566787776 666677777778777764
No 96
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=29.22 E-value=1.4e+02 Score=20.38 Aligned_cols=139 Identities=16% Similarity=0.170 Sum_probs=66.1
Q ss_pred ceEEeCCceEEEECCcCCcCCCCeEEEEEEEEeCCCCceEEEEEEEEeecCCCCCccCCCceEEEEecCCCCCcEEEEEE
Q psy11061 15 HFYMKSVSGEICIAQDLDFESRSSYEFPVVATDRGGLSTTAMVRIQITDVNDNEPIFNPVEYNVSLRDDIQTTTAFAVVL 94 (212)
Q Consensus 15 ~F~id~~tg~i~~~~~lD~E~~~~~~l~i~a~d~~~~~~~~~v~i~V~d~nd~~P~f~~~~~~~~v~e~~~~g~~v~~~~ 94 (212)
.+.+.. +.|.+. .+..+....|...+.-.. |.......+.+.|.. +|.+........+.++. . ..+.
T Consensus 59 r~~~~~--~~L~i~-~v~~~D~G~Y~C~~~~~~-g~~~~~~~~~l~V~~----~p~~~~~~~~~~~~~g~----~-~~l~ 125 (212)
T 1f97_A 59 RVTFSS--SGITFS-SVTRKDNGEYTCMVSEEG-GQNYGEVSIHLTVLV----PPSKPTISVPSSVTIGN----R-AVLT 125 (212)
T ss_dssp TEEEET--TEEEES-CCCGGGCEEEEEEEEETT-SSSEEEEEEEEEEEB----CCCCCEEECCSEEETTS----C-EEEE
T ss_pred cEEeec--eeEEEc-ccCcccCeEEEEEEEccC-CCcccEEEEEEEEEc----CCCCcccCCccccCCCC----e-EEEE
Confidence 344443 455543 334556677877765432 223455667777764 45443322222344332 2 3455
Q ss_pred EEeCCCCCCceEEEEEEcC-CC-----------CCcEEEeCCccEEEEeeecCCCCCCeEEEEEEEEECCCCCeeeeEEE
Q psy11061 95 ATDRDSDRFGTISYKIVTG-KD-----------ANLFRIDRSSGELFVTRGNFLSRSNSYHINVSAMDGGGNKCSQDAQV 162 (212)
Q Consensus 95 a~D~D~~~~~~i~y~i~~~-~~-----------~~~F~id~~~G~i~~~~~~~ld~~~~~~l~v~a~D~~~~~~~~~~~v 162 (212)
+.-....+...+.|..... .. ...+.+....+.+.+.... ....+.| ...|.+..+.. .....+
T Consensus 126 C~~~~~~p~~~i~W~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~-~~d~G~Y--~C~a~n~~g~~-~~s~~~ 201 (212)
T 1f97_A 126 CSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTIDPKSGDLIFDPVT-AFDSGEY--YCQAQNGYGTA-MRSEAA 201 (212)
T ss_dssp EECSCCBSCCEEEEEETTEESBC-----CBSCSSSCEEECTTTCCEEESSCC-GGGCEEE--EEEEECSSSCC-EECCCE
T ss_pred EEcccCcCCCEEEEEeCCcccccccccccccccCceeEecCCCceEEEEecC-hhhCcEE--EEEEccccCCc-cccceE
Confidence 5422222233466654322 10 0235555556666654431 1144555 45556655433 234567
Q ss_pred EEEEeeCC
Q psy11061 163 NINIINSH 170 (212)
Q Consensus 163 ~I~v~d~n 170 (212)
.+.|.+++
T Consensus 202 ~l~V~~~~ 209 (212)
T 1f97_A 202 HMDAVELN 209 (212)
T ss_dssp EEEEESSC
T ss_pred EEEEEEee
Confidence 77777765
No 97
>2c4x_A Endoglucanase, ctcel9D-CEL44A; cellulase ctcel9D-CEL44A, PKD domain, CBM44, carbohydrate BI module, beta-sandwich proteins, cellulosome; 2.0A {Clostridium thermocellum} PDB: 2c26_A
Probab=27.75 E-value=81 Score=23.95 Aligned_cols=32 Identities=13% Similarity=0.348 Sum_probs=24.6
Q ss_pred CCCCCeEEEEEEEEECCCCCeeeeEEEEEEEeeC
Q psy11061 136 LSRSNSYHINVSAMDGGGNKCSQDAQVNINIINS 169 (212)
Q Consensus 136 ld~~~~~~l~v~a~D~~~~~~~~~~~v~I~v~d~ 169 (212)
+...+.|++++.|+|..+.. .+.+..|.|...
T Consensus 65 Y~~~GtYtVtLTVtD~~G~s--~t~t~~ItV~~~ 96 (260)
T 2c4x_A 65 YKNPGTYKVKLIVTDNQGAS--SSFTATIKVTSA 96 (260)
T ss_dssp CSSCEEEEEEEEEEETTSCE--EEEEEEEEEBCS
T ss_pred eCCCEEEEEEEEEEeCCCCe--EEEEEEEEECCC
Confidence 44789999999999988754 456777777654
No 98
>3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene}
Probab=26.96 E-value=1.1e+02 Score=18.46 Aligned_cols=19 Identities=32% Similarity=0.204 Sum_probs=15.8
Q ss_pred CCCCCeEEEEEEEEECCCC
Q psy11061 136 LSRSNSYHINVSAMDGGGN 154 (212)
Q Consensus 136 ld~~~~~~l~v~a~D~~~~ 154 (212)
|.....|.+.|.|.+..+.
T Consensus 65 L~p~t~Y~v~V~A~~~~G~ 83 (97)
T 3qht_C 65 LSPGVDYTITVYAYYSYYD 83 (97)
T ss_dssp CCTTCEEEEEEEEEEEETT
T ss_pred CCCCCEEEEEEEEEeCCcc
Confidence 6688999999999887654
No 99
>2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.03 E-value=1.3e+02 Score=18.95 Aligned_cols=20 Identities=35% Similarity=0.644 Sum_probs=16.6
Q ss_pred CCCCCeEEEEEEEEECCCCC
Q psy11061 136 LSRSNSYHINVSAMDGGGNK 155 (212)
Q Consensus 136 ld~~~~~~l~v~a~D~~~~~ 155 (212)
|.....|.+.|.|.+..+..
T Consensus 67 L~p~T~Y~v~V~A~~~~g~s 86 (108)
T 2ee3_A 67 LSSSTTYTVRVTCLYPGGGS 86 (108)
T ss_dssp CCSSCEEEEEEEEECTTSCE
T ss_pred CCCCCEEEEEEEEEeCCCcC
Confidence 66899999999999877644
No 100
>2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens}
Probab=25.74 E-value=2.1e+02 Score=21.36 Aligned_cols=28 Identities=21% Similarity=0.441 Sum_probs=21.7
Q ss_pred CCCCCeEEEEEEEEECCCCCeeeeEEEEE
Q psy11061 136 LSRSNSYHINVSAMDGGGNKCSQDAQVNI 164 (212)
Q Consensus 136 ld~~~~~~l~v~a~D~~~~~~~~~~~v~I 164 (212)
|.....|.|+|.|.|..|+..+. -.+++
T Consensus 207 Lk~~TeYsF~V~A~d~~G~~Ss~-e~vtV 234 (238)
T 2w1n_A 207 LNRHTIYNFKIAAKYSNGEVSSK-ESLTL 234 (238)
T ss_dssp CCTTCEEEEEEEEEETTSCBCCC-EEEEE
T ss_pred CCCCCEEEEEEEEEeCCCCcccc-CcEEE
Confidence 66899999999999999886544 44444
No 101
>2lv4_A Putative outer membrane or exported protein; antivirulence, adhesion, protein binding; NMR {Salmonella enterica subsp}
Probab=25.72 E-value=24 Score=23.64 Aligned_cols=30 Identities=10% Similarity=0.042 Sum_probs=19.6
Q ss_pred EEEEEEECCCCCeeeeEEEEEEEeeCCCCC
Q psy11061 144 INVSAMDGGGNKCSQDAQVNINIINSHMPI 173 (212)
Q Consensus 144 l~v~a~D~~~~~~~~~~~v~I~v~d~nd~~ 173 (212)
|.+.-.|+..+.--..|+|++.|.|+|.||
T Consensus 50 LtvisiDk~vL~PGESA~it~IvKDid~nP 79 (146)
T 2lv4_A 50 LTVMSIDKSVLSPGESATITTIVKDIDGNP 79 (146)
T ss_dssp GCEEECCCCCBCTTCEEEEEEECBBTTSCB
T ss_pred cEEEecCccccCCCcceEEEEEEEeCCCCc
Confidence 445556665443335688999999998443
No 102
>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens}
Probab=25.54 E-value=1.2e+02 Score=18.43 Aligned_cols=20 Identities=25% Similarity=0.451 Sum_probs=16.4
Q ss_pred CCCCCeEEEEEEEEECCCCC
Q psy11061 136 LSRSNSYHINVSAMDGGGNK 155 (212)
Q Consensus 136 ld~~~~~~l~v~a~D~~~~~ 155 (212)
|.....|.|+|.|.+..+..
T Consensus 62 L~p~t~Y~~~V~A~n~~g~s 81 (100)
T 3b83_A 62 LEPNTTYEIRIVARNGQQYS 81 (100)
T ss_dssp CCTTCEEEEEEEEEETTEEC
T ss_pred CCCCCEEEEEEEEEeCCCCC
Confidence 66889999999999987543
No 103
>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=24.80 E-value=94 Score=19.64 Aligned_cols=19 Identities=26% Similarity=0.506 Sum_probs=16.6
Q ss_pred CCCCCeEEEEEEEEECCCC
Q psy11061 136 LSRSNSYHINVSAMDGGGN 154 (212)
Q Consensus 136 ld~~~~~~l~v~a~D~~~~ 154 (212)
|.....|.|+|.|.+..|.
T Consensus 75 L~p~t~Y~frV~A~N~~G~ 93 (112)
T 1bpv_A 75 LTEDAAYEFRVIAKNAAGA 93 (112)
T ss_dssp CCSSCCEEEEEEEECTTSC
T ss_pred CCCCCEEEEEEEEEECCCC
Confidence 6678999999999998875
No 104
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=24.31 E-value=1.6e+02 Score=25.66 Aligned_cols=27 Identities=33% Similarity=0.368 Sum_probs=21.1
Q ss_pred CCeEEEEEEEEeCCCC--ceEEEEEEEEe
Q psy11061 36 RSSYEFPVVATDRGGL--STTAMVRIQIT 62 (212)
Q Consensus 36 ~~~~~l~i~a~d~~~~--~~~~~v~i~V~ 62 (212)
...|+|.|+|.+..+. ...+.+.|.|.
T Consensus 747 pG~Y~f~V~a~~~~g~w~~~~~~l~i~I~ 775 (781)
T 3v9f_A 747 PGKYEFLVKARLHNQDWSEDTTSLRIHIN 775 (781)
T ss_dssp SEEEEEEEEEEETTSCCCSCCEEEEEEEC
T ss_pred CceEEEEEEEECCCCccCCCceEEEEEEc
Confidence 5789999999998763 35567888876
No 105
>3v6o_A Leptin receptor; receptor-antibody complex, cytokine receptor, antibody FAB F immunoglobulin fold; HET: NAG; 1.95A {Homo sapiens}
Probab=24.24 E-value=1.9e+02 Score=20.32 Aligned_cols=29 Identities=14% Similarity=0.045 Sum_probs=16.6
Q ss_pred CCeEEEEEEEEeCCCCceEEEEEEEEeec
Q psy11061 36 RSSYEFPVVATDRGGLSTTAMVRIQITDV 64 (212)
Q Consensus 36 ~~~~~l~i~a~d~~~~~~~~~v~i~V~d~ 64 (212)
...|.|.|.|.+..|...+..+.+.+.++
T Consensus 79 ~~~Y~~~V~a~N~~G~~~s~~~~~~~~~~ 107 (206)
T 3v6o_A 79 LSGYTMWIRINHSLGSLDSPPTCVLPDSV 107 (206)
T ss_dssp TSCEEEEEEEC---CCEECCCEEECGGGG
T ss_pred cccEEEEEEEEcCCccccCCcccEeecce
Confidence 46799999999876644444455544443
No 106
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Probab=23.89 E-value=1.8e+02 Score=20.09 Aligned_cols=19 Identities=21% Similarity=0.406 Sum_probs=15.2
Q ss_pred CCCCCeEEEEEEEEECCCC
Q psy11061 136 LSRSNSYHINVSAMDGGGN 154 (212)
Q Consensus 136 ld~~~~~~l~v~a~D~~~~ 154 (212)
|.....|.|+|+|.+..+.
T Consensus 171 L~p~t~Y~~~V~A~n~~g~ 189 (215)
T 1bqu_A 171 LKPFTEYVFRIRCMKEDGK 189 (215)
T ss_dssp CCSSEEEEEEEEEEETTSC
T ss_pred CCCCCEEEEEEEEccCCCC
Confidence 5577899999999986543
No 107
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=22.03 E-value=1.7e+02 Score=19.86 Aligned_cols=130 Identities=15% Similarity=0.158 Sum_probs=57.6
Q ss_pred eEEEECCcCCcCCCCeEEEEEEEEeCCCCceEEEEEEEEeecCCCCCccCCCceEEEEecCCCCCcEEEEEEEEeCCCCC
Q psy11061 23 GEICIAQDLDFESRSSYEFPVVATDRGGLSTTAMVRIQITDVNDNEPIFNPVEYNVSLRDDIQTTTAFAVVLATDRDSDR 102 (212)
Q Consensus 23 g~i~~~~~lD~E~~~~~~l~i~a~d~~~~~~~~~v~i~V~d~nd~~P~f~~~~~~~~v~e~~~~g~~v~~~~a~D~D~~~ 102 (212)
+.|.+. .+..+....|...+.-... .......+.+.|.. +|.+........+.++.. ..+.+.-.+..+
T Consensus 68 ~~L~i~-~~~~~d~G~Y~C~~~~~~g-~~~~~~~~~l~V~~----~p~~~~~~~~~~~~~g~~-----~~l~C~~~~~~p 136 (209)
T 1nbq_A 68 TGITFK-SVTREDTGTYTCMVSEEGG-NSYGEVKVKLIVLV----PPSKPTVNIPSSATIGNR-----AVLTCSEQDGSP 136 (209)
T ss_dssp TEEECS-CCCTTSCSEEEEEEEETTS-SCEECCEEECCEEB----CCCCCCCCCBSEEETTSC-----EEECCCCCSCBS
T ss_pred cEEEEe-eCCHHHCcEEEEEEecCCC-CccceEEEEEEEec----CCcCCCcccccceecCCE-----EEEEEeCCCCCC
Confidence 444443 3455666788887754322 22344455555553 455543333333444322 234443211112
Q ss_pred CceEEEEEEcCCCC-----------CcEEEeCCccEEEEeeecCCCCCCeEEEEEEEEECCCCCeeeeEEEEEEEe
Q psy11061 103 FGTISYKIVTGKDA-----------NLFRIDRSSGELFVTRGNFLSRSNSYHINVSAMDGGGNKCSQDAQVNINII 167 (212)
Q Consensus 103 ~~~i~y~i~~~~~~-----------~~F~id~~~G~i~~~~~~~ld~~~~~~l~v~a~D~~~~~~~~~~~v~I~v~ 167 (212)
...+.|........ ..|.+....+.+.+.... .+..+.|... |.+..+.. .....+.+.|.
T Consensus 137 ~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~-~~d~G~Y~C~--a~n~~g~~-~~s~~v~l~V~ 208 (209)
T 1nbq_A 137 PSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLS-ASDTGEYSCE--ARNGYGTP-MTSNAVRMEAV 208 (209)
T ss_dssp CCEEEEEETTCCCCSCSSSSSSCTTCCCCCCTTTCCEEESSCC-GGGCCCEEEE--EECSSSCC-EECCCBCCEEE
T ss_pred CceeEEEECCeeCCCccccceeeeccceEEcCCcceEEEEecc-ccCCeEEEEE--EeCCcCcc-cccccEEEEEe
Confidence 23466655321100 233444445566554331 1145666554 45555443 12344555554
No 108
>1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=21.60 E-value=71 Score=19.84 Aligned_cols=19 Identities=26% Similarity=0.326 Sum_probs=15.7
Q ss_pred CCCCCeEEEEEEEEECCCC
Q psy11061 136 LSRSNSYHINVSAMDGGGN 154 (212)
Q Consensus 136 ld~~~~~~l~v~a~D~~~~ 154 (212)
|.....|.|+|.|.+..+.
T Consensus 79 L~p~t~Y~frV~A~n~~G~ 97 (117)
T 1uem_A 79 LRPNTIYLFMVRAINPQGL 97 (117)
T ss_dssp CCTTCEEEEEEEEEETTEE
T ss_pred CCCCCEEEEEEEEECCCcc
Confidence 5578889999999998754
No 109
>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens}
Probab=21.31 E-value=1.7e+02 Score=18.70 Aligned_cols=21 Identities=19% Similarity=0.314 Sum_probs=17.5
Q ss_pred CCCCCeEEEEEEEEECCCCCe
Q psy11061 136 LSRSNSYHINVSAMDGGGNKC 156 (212)
Q Consensus 136 ld~~~~~~l~v~a~D~~~~~~ 156 (212)
|.....|+|+|.|.+..|...
T Consensus 71 L~p~t~Y~frV~A~N~~G~s~ 91 (114)
T 2kbg_A 71 LQWTMGYEVQITAANRLGYSE 91 (114)
T ss_dssp CCTTCCEEEEEEEECTTSCEE
T ss_pred CCCCCEEEEEEEEEeCCcCcC
Confidence 568899999999999887653
No 110
>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.92 E-value=1.5e+02 Score=18.05 Aligned_cols=19 Identities=37% Similarity=0.529 Sum_probs=15.7
Q ss_pred CCCCCeEEEEEEEEECCCC
Q psy11061 136 LSRSNSYHINVSAMDGGGN 154 (212)
Q Consensus 136 ld~~~~~~l~v~a~D~~~~ 154 (212)
|.....|.|+|.|.+..+.
T Consensus 71 L~p~t~Y~~~V~A~n~~G~ 89 (109)
T 2e7h_A 71 LKRGASYLVQVRARSEAGY 89 (109)
T ss_dssp CCTTSCEEEEEEEECSSCB
T ss_pred CCCCCeEEEEEEEEeCCcc
Confidence 6678899999999987653
No 111
>2qvk_A CBD2, sodium/calcium exchanger 1; calcium binding domain, metal binding protein; 1.45A {Canis lupus familiaris} PDB: 2qvm_A 2fwu_A 2kls_A
Probab=20.55 E-value=2.4e+02 Score=20.25 Aligned_cols=78 Identities=22% Similarity=0.228 Sum_probs=43.1
Q ss_pred CCCCCccCCCceEEEEecCCCCCcEEEEEEEEeCCCCCCceEEEEEEcCCCC---CcEEEeCCccEEEEeeecCCCCCCe
Q psy11061 65 NDNEPIFNPVEYNVSLRDDIQTTTAFAVVLATDRDSDRFGTISYKIVTGKDA---NLFRIDRSSGELFVTRGNFLSRSNS 141 (212)
Q Consensus 65 nd~~P~f~~~~~~~~v~e~~~~g~~v~~~~a~D~D~~~~~~i~y~i~~~~~~---~~F~id~~~G~i~~~~~~~ld~~~~ 141 (212)
+|++..|....-...|.|+. |...+.+.-... ......+.|....|.+. .-|. +.+|.|.... ....
T Consensus 2 DD~~Gv~sF~~~~y~V~E~~--G~v~vtV~R~gg-~~g~VsV~y~T~dGTA~agG~DY~--~~sGtL~F~~-----GEt~ 71 (192)
T 2qvk_A 2 PGHAGIFTFEEPVTHVSESI--GIMEVKVLRTSG-ARGNVIVPYKTIEGTARGGGEDFE--DTCGELEFQN-----DEIV 71 (192)
T ss_dssp --CCCEEEESCSEEEEETTC--CEEEEEEEEESC-CCSCEEEEEEEEESSSCTTTTSBC--CCEEEEEECT-----TCCE
T ss_pred CCCceEEEEcCCeEEEEcCc--eEEEEEEEEeCC-CCceEEEEEEeeCCceeccCcCcc--ccceEEEECC-----CCeE
Confidence 45666776666678888874 566666665544 22244688888877432 1222 2456655332 2344
Q ss_pred EEEEEEEEECC
Q psy11061 142 YHINVSAMDGG 152 (212)
Q Consensus 142 ~~l~v~a~D~~ 152 (212)
-.+.|...|..
T Consensus 72 KtI~I~IidD~ 82 (192)
T 2qvk_A 72 KTISVKVIDDE 82 (192)
T ss_dssp EEEEEEBCCCS
T ss_pred EEEEEEEeCCC
Confidence 55566665544
No 112
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=20.04 E-value=2.9e+02 Score=20.94 Aligned_cols=20 Identities=35% Similarity=0.566 Sum_probs=16.2
Q ss_pred CCCCCeEEEEEEEEECCCCC
Q psy11061 136 LSRSNSYHINVSAMDGGGNK 155 (212)
Q Consensus 136 ld~~~~~~l~v~a~D~~~~~ 155 (212)
|.....|.++|.|.+..|..
T Consensus 336 L~p~t~Y~~~V~A~~~~G~g 355 (368)
T 1fnf_A 336 LKPGVDYTITVYAVTGRGDS 355 (368)
T ss_dssp CCTTCCEEEEEEEECCCSSS
T ss_pred CCCCCEEEEEEEEeCCCCcC
Confidence 55778899999999987644
No 113
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=20.02 E-value=3e+02 Score=21.01 Aligned_cols=106 Identities=14% Similarity=0.070 Sum_probs=49.5
Q ss_pred CCCCeEEEEEEEEeCCCCceEEEEEEEEeecCCCCCccCCCceEEEEecCCCCCcEEEEEEEEeCCCCCCc-eEEEEEEc
Q psy11061 34 ESRSSYEFPVVATDRGGLSTTAMVRIQITDVNDNEPIFNPVEYNVSLRDDIQTTTAFAVVLATDRDSDRFG-TISYKIVT 112 (212)
Q Consensus 34 E~~~~~~l~i~a~d~~~~~~~~~v~i~V~d~nd~~P~f~~~~~~~~v~e~~~~g~~v~~~~a~D~D~~~~~-~i~y~i~~ 112 (212)
+....|.+.|.|.+.++........+ .- .|. .+..+.+.... .... .+.-..++....+ .+.|....
T Consensus 249 ~p~t~Y~~~V~A~~~~g~s~~~~~~~--~t----~p~---~P~~l~~~~~~-~~sv--~l~W~~p~~~~~~Y~v~~~~~~ 316 (375)
T 3t1w_A 249 LPGTEYVVSVSSVYEQHESTPLRGRQ--KT----GLD---SPTGIDFSDIT-ANSF--TVHWIAPRATITGYRIRHHPEH 316 (375)
T ss_dssp CTTCEEEEEEEEEETTEECCCEEEEE--EC----CCC---CCEEEEEESCC-SSCE--EEEEECCSSCCSEEEEEEEETT
T ss_pred CCCCEEEEEEEEEcCCCcCCceeeEE--ec----CCC---CCCccEeeecc-CCEE--EEEECCCCcceeeEEEEEEECC
Confidence 34568999999999876443333322 11 111 22344443222 1233 3333333211111 23343322
Q ss_pred C-CCCCcEEEeCCccEEEEeeecCCCCCCeEEEEEEEEECCCC
Q psy11061 113 G-KDANLFRIDRSSGELFVTRGNFLSRSNSYHINVSAMDGGGN 154 (212)
Q Consensus 113 ~-~~~~~F~id~~~G~i~~~~~~~ld~~~~~~l~v~a~D~~~~ 154 (212)
+ .......+....-... ... |.....|.++|.|.+..+.
T Consensus 317 ~~~~~~~~~~~~~~~~~~-i~~--L~p~t~Y~~~V~A~~~~G~ 356 (375)
T 3t1w_A 317 FSGRPREDRVPHSRNSIT-LTN--LTPGTEYVVSIVALNGREE 356 (375)
T ss_dssp CCSSCEEEEEETTCCEEE-ECS--CCTTCEEEEEEEEEETTEE
T ss_pred CCCcceeEEcCCCccEEE-ECC--CCCCCEEEEEEEEECCCCC
Confidence 2 1111223332222222 233 5578899999999998754
Done!