Query psy11062
Match_columns 281
No_of_seqs 194 out of 1697
Neff 8.7
Searched_HMMs 29240
Date Fri Aug 16 17:06:39 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11062.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11062hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2a62_A Cadherin-8; extracellul 100.0 2.6E-47 8.9E-52 341.5 16.7 262 4-271 26-303 (322)
2 1l3w_A EP-cadherin, C-cadherin 100.0 1.7E-43 5.7E-48 337.8 19.8 224 5-231 33-269 (546)
3 3q2v_A Cadherin-1; cell adhesi 100.0 3E-43 1E-47 336.4 20.8 224 5-231 27-263 (550)
4 3q2w_A Cadherin-2; cell adhesi 100.0 2.1E-42 7.3E-47 331.1 22.4 225 5-232 27-266 (559)
5 3ubh_A Neural-cadherin; cell a 100.0 8.9E-42 3E-46 316.2 24.5 257 1-267 135-401 (419)
6 3ubf_A Neural-cadherin; cell a 100.0 5.4E-41 1.8E-45 300.1 24.1 253 2-265 10-293 (316)
7 1q55_A EP-cadherin, C-cadherin 100.0 1.1E-41 3.8E-46 340.2 19.8 224 5-231 182-418 (880)
8 3q2v_A Cadherin-1; cell adhesi 100.0 1.3E-40 4.3E-45 318.2 22.2 224 1-231 130-373 (550)
9 3q2w_A Cadherin-2; cell adhesi 100.0 3.7E-40 1.3E-44 315.6 24.1 226 1-232 130-380 (559)
10 1l3w_A EP-cadherin, C-cadherin 100.0 4.3E-41 1.5E-45 321.1 16.3 224 1-231 136-379 (546)
11 3ubh_A Neural-cadherin; cell a 100.0 6.1E-40 2.1E-44 303.9 23.4 220 1-230 14-256 (419)
12 2a4e_A Cadherin-11; dimer, cal 100.0 1E-39 3.4E-44 276.3 21.4 180 4-187 27-215 (215)
13 1q55_A EP-cadherin, C-cadherin 100.0 1.9E-39 6.3E-44 324.1 16.3 224 1-231 285-528 (880)
14 3mvs_A Cadherin-23, otocadheri 100.0 2.2E-38 7.7E-43 267.3 19.9 178 1-185 32-210 (210)
15 2x2u_A Proto-oncogene tyrosine 100.0 7.7E-40 2.6E-44 282.6 7.5 185 1-189 25-245 (246)
16 3qrb_A Cadherin-1; cell adhesi 100.0 1.9E-37 6.3E-42 262.3 19.3 176 5-180 27-213 (213)
17 3ppe_A Vascular endothelial ca 100.0 1.3E-35 4.5E-40 249.0 22.3 171 4-180 26-203 (203)
18 2qvi_A Cadherin-2; beta barrel 100.0 2.7E-36 9.4E-41 255.3 18.1 176 5-180 27-215 (215)
19 3k5r_A Cadherin 13; mouse, str 100.0 1.1E-35 3.8E-40 252.2 19.6 179 2-180 24-218 (218)
20 3lnd_A CDH6 protein, cadherin 100.0 3.1E-36 1.1E-40 253.7 13.1 174 3-180 25-207 (207)
21 3ubf_A Neural-cadherin; cell a 100.0 6.1E-34 2.1E-38 254.4 21.9 178 1-185 130-316 (316)
22 2a62_A Cadherin-8; extracellul 100.0 8.5E-33 2.9E-37 247.4 16.7 175 1-179 128-322 (322)
23 3mvs_A Cadherin-23, otocadheri 100.0 3.1E-31 1.1E-35 223.6 12.3 183 76-268 3-188 (210)
24 4apx_B Protocadherin-15, otoca 100.0 4.7E-30 1.6E-34 220.5 19.7 175 5-180 46-237 (242)
25 2yst_A Protocadherin-7; BH-PCD 100.0 8.5E-31 2.9E-35 201.4 8.2 118 69-186 2-119 (119)
26 2a4e_A Cadherin-11; dimer, cal 100.0 4.1E-29 1.4E-33 211.2 15.1 176 86-267 6-189 (215)
27 2qvi_A Cadherin-2; beta barrel 100.0 5.1E-29 1.7E-33 210.7 13.5 178 87-267 6-195 (215)
28 3ppe_A Vascular endothelial ca 100.0 1.7E-28 5.8E-33 205.7 14.0 173 87-267 6-185 (203)
29 2x2u_A Proto-oncogene tyrosine 100.0 1.1E-29 3.9E-34 218.9 3.5 179 80-263 2-214 (246)
30 3lnd_A CDH6 protein, cadherin 100.0 6.5E-29 2.2E-33 208.9 7.3 175 87-267 6-188 (207)
31 3qrb_A Cadherin-1; cell adhesi 99.9 1.1E-27 3.7E-32 202.3 13.5 176 87-267 6-196 (213)
32 3k5r_A Cadherin 13; mouse, str 99.9 1.4E-27 4.8E-32 202.3 11.1 176 87-268 7-200 (218)
33 2ee0_A Protocadherin-9; Ca dom 99.9 2.8E-27 9.5E-32 180.3 9.0 112 69-182 2-114 (114)
34 2yqg_A Desmoglein-2, HDGC; cad 99.9 4.3E-25 1.5E-29 170.4 4.9 116 74-190 5-122 (123)
35 4apx_B Protocadherin-15, otoca 99.9 1.8E-23 6.3E-28 179.4 11.8 178 85-267 21-217 (242)
36 1ncg_A N-cadherin; cell adhesi 99.9 9.2E-23 3.2E-27 154.2 7.9 103 85-188 6-110 (110)
37 1wyj_A Protocadherin beta 14; 99.8 2E-21 6.7E-26 150.1 0.5 106 84-196 11-123 (125)
38 1zvn_A Mn-cadherin; strand dim 99.8 3.8E-19 1.3E-23 131.5 9.3 91 86-180 6-99 (99)
39 1zxk_A Cadherin-8; strand dime 99.8 4.4E-19 1.5E-23 131.0 8.8 91 86-180 5-98 (98)
40 3k6d_A T-cadherin; cell adhesi 99.8 2.4E-18 8.3E-23 127.3 9.0 90 87-180 6-99 (99)
41 3k6f_A T-cadherin; cell adhesi 99.7 6.8E-18 2.3E-22 125.1 10.1 90 87-180 7-100 (100)
42 3k6i_A T-cadherin; cell adhesi 99.7 1.2E-17 4E-22 123.7 10.8 90 87-180 6-99 (99)
43 2omz_B Epithelial-cadherin; le 99.7 6.6E-18 2.3E-22 126.3 8.1 92 87-181 10-105 (105)
44 1ncg_A N-cadherin; cell adhesi 99.7 5.9E-17 2E-21 122.2 6.3 78 4-81 28-110 (110)
45 2yqg_A Desmoglein-2, HDGC; cad 99.7 1.2E-16 4.1E-21 122.9 6.9 76 8-83 42-122 (123)
46 2yst_A Protocadherin-7; BH-PCD 99.6 5.3E-16 1.8E-20 118.6 5.4 79 1-79 36-119 (119)
47 1wyj_A Protocadherin beta 14; 99.6 1.1E-16 3.7E-21 123.4 -1.2 75 13-89 45-123 (125)
48 1wuz_A Pcdha4 protein, CNR-EC1 99.5 1.6E-15 5.5E-20 112.8 1.7 95 84-184 3-103 (103)
49 1zvn_A Mn-cadherin; strand dim 99.4 2.1E-13 7E-18 100.6 8.0 70 4-73 27-99 (99)
50 2omz_B Epithelial-cadherin; le 99.4 2E-13 6.7E-18 101.9 7.8 72 2-74 29-105 (105)
51 1zxk_A Cadherin-8; strand dime 99.4 7E-13 2.4E-17 97.5 8.0 70 4-73 26-98 (98)
52 2ee0_A Protocadherin-9; Ca dom 99.4 1.6E-13 5.4E-18 103.9 4.5 74 1-75 36-114 (114)
53 3k6i_A T-cadherin; cell adhesi 99.4 1.1E-12 3.9E-17 96.6 8.0 72 2-73 23-99 (99)
54 3k6f_A T-cadherin; cell adhesi 99.4 1.5E-12 5.3E-17 96.1 8.4 72 2-73 24-100 (100)
55 3k6d_A T-cadherin; cell adhesi 99.4 1.3E-12 4.3E-17 96.4 7.4 71 3-73 24-99 (99)
56 1wuz_A Pcdha4 protein, CNR-EC1 99.1 2.4E-11 8.1E-16 90.2 2.2 65 11-77 35-103 (103)
57 2yhg_A SDE_182CT, cellulose-bi 92.8 0.51 1.7E-05 43.0 9.2 69 106-178 365-436 (437)
58 1op4_A Neural-cadherin; beta s 90.4 1.9 6.4E-05 33.6 8.9 81 76-165 31-111 (159)
59 3pdd_A Glycoside hydrolase, fa 90.2 6 0.0002 31.5 17.7 117 45-180 60-180 (190)
60 3rb5_A Na/Ca exchange protein; 89.5 9.5 0.00032 32.8 14.1 127 75-211 6-146 (298)
61 2kpn_A Bacillolysin; solution 82.4 3 0.0001 29.9 5.7 45 141-187 48-92 (103)
62 2yrl_A KIAA1837 protein; PKD d 81.7 3.5 0.00012 29.3 5.9 32 150-183 67-98 (102)
63 3ead_A Na/Ca exchange protein; 80.4 15 0.0005 27.5 9.4 45 77-124 3-47 (137)
64 3gin_A Sodium/calcium exchange 71.5 23 0.00079 27.3 8.5 57 65-124 10-66 (160)
65 3rb5_A Na/Ca exchange protein; 71.1 48 0.0017 28.3 13.8 78 42-123 87-164 (298)
66 3us9_A Sodium/calcium exchange 70.5 50 0.0017 28.2 15.3 118 87-211 18-164 (295)
67 2y72_A Collagenase, collagenas 68.9 13 0.00043 25.2 5.8 31 147-179 54-84 (85)
68 3knb_B Obscurin-like protein 1 65.1 32 0.0011 23.9 8.6 91 78-180 13-105 (107)
69 2yrl_A KIAA1837 protein; PKD d 46.3 49 0.0017 23.1 5.8 32 44-76 67-98 (102)
70 1op4_A Neural-cadherin; beta s 42.5 96 0.0033 23.8 7.2 47 9-60 66-112 (159)
71 3pe9_A Fibronectin(III)-like m 41.7 87 0.003 21.8 9.3 29 45-73 60-88 (98)
72 3pe9_A Fibronectin(III)-like m 40.4 91 0.0031 21.7 9.9 71 98-180 18-88 (98)
73 2yhg_A SDE_182CT, cellulose-bi 40.3 1.1E+02 0.0039 27.6 8.4 61 10-71 370-436 (437)
74 2kpn_A Bacillolysin; solution 39.1 73 0.0025 22.5 5.7 54 25-79 34-91 (103)
75 2e7m_A Protein KIAA0319; PKD d 39.1 29 0.00099 25.2 3.5 58 115-180 48-105 (113)
76 1u2c_A Dystroglycan; IG-like d 36.7 1.4E+02 0.0048 24.7 7.7 56 126-183 44-104 (246)
77 3klq_A Putative pilus anchorin 34.5 1.5E+02 0.005 22.3 8.1 94 62-168 4-98 (141)
78 3knb_A Titin; IG-like, titin, 32.4 1.1E+02 0.0039 20.4 9.6 91 78-180 5-99 (100)
79 1u2c_A Dystroglycan; IG-like d 29.9 2.3E+02 0.008 23.3 8.8 66 9-76 30-104 (246)
80 3ott_A Two-component system se 29.9 1.4E+02 0.0046 28.5 7.8 70 103-179 678-747 (758)
81 1b4r_A Protein (PKD1_human); P 29.3 1E+02 0.0035 20.6 4.8 29 148-179 51-79 (80)
82 2y72_A Collagenase, collagenas 28.7 1.1E+02 0.0039 20.2 5.2 30 42-72 55-84 (85)
83 2cqv_A MLCK, myosin light chai 24.9 1.6E+02 0.0055 19.8 10.9 94 78-183 7-102 (114)
84 4a2l_A BT_4663, two-component 23.0 2.9E+02 0.0098 26.3 8.7 77 101-190 711-787 (795)
85 2c4x_A Endoglucanase, ctcel9D- 22.1 1.5E+02 0.005 24.7 5.5 34 146-181 63-96 (260)
86 2ptt_B Natural killer cell rec 21.2 1.9E+02 0.0065 20.8 5.1 49 127-180 64-112 (112)
87 2kzw_A Uncharacterized protein 20.4 1.8E+02 0.006 21.8 5.2 32 147-181 109-140 (145)
No 1
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=100.00 E-value=2.6e-47 Score=341.50 Aligned_cols=262 Identities=24% Similarity=0.348 Sum_probs=223.3
Q ss_pred EEecC-CCcEEEEEEeCCCCceEEEECCccEEEECcCCCceeccEEEEEEEEEeCC--CCceeEEEEEEEEEecCCCCCe
Q psy11062 4 LLLDQ-SNPIRYTIHSGDPEGYFTLDSTTGVIRTAATLDHEVTGVLLLSVQASSGS--PPLYSYAQVKVTIEDRNDNAPE 80 (281)
Q Consensus 4 ~d~d~-~~~l~Y~i~~g~~~~~F~Id~~~G~i~~~~~LD~E~~~~~~l~v~a~dg~--~~~~~~~~v~i~V~dvNd~~P~ 80 (281)
+|.|. ++.++|+|.++...++|+|++.+|.|++.++||||+...|.|.|.|+|+. +++++++.+.|.|.|+|||+|.
T Consensus 26 ~D~D~g~~~i~Y~l~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~~~~~~~~~~~v~I~V~DvNDn~P~ 105 (322)
T 2a62_A 26 TDLDPGSKKIKYILSGDGAGTIFQINDITGDIHAIKRLDREEKAEYTLTAQAVDFETNKPLEPPSEFIIKVQDINDNAPE 105 (322)
T ss_dssp CCCCCSSCCCEEEEEETTBTTTEEEETTTTEEEECSCCCTTTCSBCCEEEEEECTTTCSEEEEEEEECEECCCCSCSCBC
T ss_pred EcCCCCCCEEEEEEECCCCCCcEEEeCCcCEEEEeccCCcccccEEEEEEEEEECCCCCcccceEEEEEEEEecCCCCCc
Confidence 45554 47899999876556789999999999999999999999999999999754 3467788999999999999999
Q ss_pred eccCcEEEEEeCCCCCCceEEEEEEEeCCC---CCCceEEEEEeeCCCCCceeeEEeCceeEEEEc-eecCccCcceEEE
Q psy11062 81 FESTTIRLSVPESAALGLPLYTVVARDKDS---GDNGKIRYHLASGNFGDSRLFAVDQTSGHLSLS-KHLDYETSQRHTI 156 (281)
Q Consensus 81 f~~~~~~~~v~En~~~gt~v~~v~a~D~D~---g~~~~i~y~l~~~~~~~~~~F~id~~tG~i~~~-~~LD~E~~~~y~l 156 (281)
|....|.+.|+|+.++|+.++++.|+|+|. |.|+.++|+|..+ ...|.|++.+|.|++. ++||||....|.|
T Consensus 106 F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~G~n~~i~Y~i~~~----~~~F~Id~~tG~i~~~~~~LD~E~~~~y~l 181 (322)
T 2a62_A 106 FLNGPYHATVPEMSILGTSVTNVTATDADDPVYGNSAKLVYSILEG----QPYFSIEPETAIIKTALPNMDREAKEEYLV 181 (322)
T ss_dssp CSSSEEEEEECSSCCTTCBCCCCCCCBCSCSSSTTSSCEEEEEEEC----TTTEEECTTTCCEEECSSCCCGGGCSEEEE
T ss_pred cCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCccEEEEEEEccC----CCCEEEecCCCEEEecccCCCcccCCeEEE
Confidence 999999999999999999999999999995 7889999999985 3589999999999998 8999999999999
Q ss_pred EEEEEECCCCC--CeEEEEEEEEEEeCCCCCCeeeCCceEEEEeCCCCCCcEEEEEEeeEEEeecCccccEEEEEeecCC
Q psy11062 157 VVSATDQGDPP--MSSNLTVLLEVQDVNDNPPVFERSEYFVSVSEALPAKSQVRTTCTPLYVLVEGQCSLVCWSTLRLMT 234 (281)
Q Consensus 157 ~V~a~D~~~p~--~~~~~~v~I~V~DvND~~P~f~~~~y~~~v~E~~~~gt~v~~v~A~~yd~d~g~~~~~~~~~~~~~~ 234 (281)
.|+|+|++.|+ ++++++|+|.|.|+|||+|.|.+..|.+.|+|+.++|+.|++|.|+ |.|.|.|+.+.|++.....
T Consensus 182 ~V~a~D~g~p~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~--D~D~g~n~~i~Y~i~~g~~ 259 (322)
T 2a62_A 182 VIQAKDMGGHSGGLSGTTTLTVTLTDVNDNPPKFAQSLYHFSVPEDVVLGTAIGRVKAN--DQDIGENAQSSYDIIDGDG 259 (322)
T ss_dssp EEEEEESCSSSSCCBCCEEEEEEECCCCCCCCCCSCSEEEEEECSCCSSCCEEEEEECC--CSSCGGGTCCEEEEC---C
T ss_pred EEEEEECCCCCCCceeEEEEEEEEEecCCCCCeecCCCceeEeECCCCCCcEEEEEEEE--eCCCCCCceEEEEEECCCC
Confidence 99999999874 8899999999999999999999999999999999999999999999 9999999999999876433
Q ss_pred h--hhhh-----ccCCCCCCCCcceEEEEEEEEEEecCcceeee
Q psy11062 235 H--STLK-----SELNSPLGSNSFQLSILWYSIFLRTNTMQIYR 271 (281)
Q Consensus 235 ~--~~l~-----~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~ 271 (281)
. +.++ ..|...+.+..-.-....|+|.|++.++-..+
T Consensus 260 ~~~F~I~~d~~~~tG~i~~~~~LD~E~~~~y~l~V~A~D~g~pp 303 (322)
T 2a62_A 260 TALFEITSDAQAQDGVIRLRKPLDFETKKSYTLKVEAANIHIDP 303 (322)
T ss_dssp CSSBCCBCCTTTSEEEEEBCSCCCCSSCCEEEEEEEEECCCSSC
T ss_pred CCcEEEeccCCCceEEEEECCcCCcccCCeEEEEEEEEECCCCC
Confidence 3 3333 12333333333223456799999987765544
No 2
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=100.00 E-value=1.7e-43 Score=337.80 Aligned_cols=224 Identities=27% Similarity=0.379 Sum_probs=205.1
Q ss_pred EecCCCcEEEEEEeCC----CCceEEEECCccEEEECcCCCceeccEEEEEEEEEeCC-CCceeEEEEEEEEEecCCCCC
Q psy11062 5 LLDQSNPIRYTIHSGD----PEGYFTLDSTTGVIRTAATLDHEVTGVLLLSVQASSGS-PPLYSYAQVKVTIEDRNDNAP 79 (281)
Q Consensus 5 d~d~~~~l~Y~i~~g~----~~~~F~Id~~~G~i~~~~~LD~E~~~~~~l~v~a~dg~-~~~~~~~~v~i~V~dvNd~~P 79 (281)
|.|.++.|.|+|.+++ +.++|.|++.+|.|+++++||||+...|.|.|.|.|+. ++.++++.|.|.|.|+|||+|
T Consensus 33 d~d~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~l~~~~~LDrE~~~~y~l~v~A~D~~~~~~~~~~~v~I~V~DvNDn~P 112 (546)
T 1l3w_A 33 NKDRFNKVYYSITGQGADNPPQGVFRIEWETGWMLVTRPLDREEYDKYVLSSHAVSENGSPVEEPMEITINVIDQNDNRP 112 (546)
T ss_dssp SGGGSSCEEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEESSSCBCSCCEEEEEEEECCSCCCC
T ss_pred CCCCCceEEEEEECCCCCCCCCceEEEeCCccEEEECCcCCcccCceEEEEEEEEeCCCCcccceEEEEEEEEecccCcC
Confidence 5667899999998754 34689999999999999999999999999999999754 456778999999999999999
Q ss_pred eeccCcEEEEEeCCCCCCceEEEEEEEeCCCC---CCceEEEEEeeCCCC--CceeeEEeCceeEEEEc-eecCccCcce
Q psy11062 80 EFESTTIRLSVPESAALGLPLYTVVARDKDSG---DNGKIRYHLASGNFG--DSRLFAVDQTSGHLSLS-KHLDYETSQR 153 (281)
Q Consensus 80 ~f~~~~~~~~v~En~~~gt~v~~v~a~D~D~g---~~~~i~y~l~~~~~~--~~~~F~id~~tG~i~~~-~~LD~E~~~~ 153 (281)
.|....|.+.|+|++++|+.++++.|+|+|.| .|+.++|+|..+.+. ....|.|++.+|.|++. ++||||....
T Consensus 113 ~F~~~~y~~~V~En~~~gt~v~~v~A~D~D~g~~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~ 192 (546)
T 1l3w_A 113 KFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIPNLFTINRETGVISLIGTGLDREKFPE 192 (546)
T ss_dssp EESSSCEEEEEETTCCSSEEEEECCEECCSCCSSSSTTCCEEEEEEESSCCSCSCSEEECTTTCEEEECSCCCCTTTCCE
T ss_pred EecCceeEEEEECCCCCCCEEEEEEEEcCCCCCCCCCCEEEEEEeCCCCCcccCCcEEEeCCCceEEEeccCCCcccCce
Confidence 99999999999999999999999999999998 689999999975421 35799999999999985 7999999999
Q ss_pred EEEEEEEEECCCCCCeEEEEEEEEEEeCCCCCCeeeCCceEEEEeCCCCCCcEEEEEEeeEEEee--cCccccEEEEEee
Q psy11062 154 HTIVVSATDQGDPPMSSNLTVLLEVQDVNDNPPVFERSEYFVSVSEALPAKSQVRTTCTPLYVLV--EGQCSLVCWSTLR 231 (281)
Q Consensus 154 y~l~V~a~D~~~p~~~~~~~v~I~V~DvND~~P~f~~~~y~~~v~E~~~~gt~v~~v~A~~yd~d--~g~~~~~~~~~~~ 231 (281)
|.|.|+|+|++.|++++++.|+|.|.|+|||+|+|....|.+.|+|+ ++|+.|+++.|+ |.| .|.++.++|++..
T Consensus 193 y~l~V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En-~~gt~v~~v~A~--D~D~~~g~n~~v~y~i~~ 269 (546)
T 1l3w_A 193 YTLTVQATDLEGAGLSVEGKAIIQITDANDNAPIFDPKTYTALVPEN-EIGFEVQRLSVT--DLDMPGTPAWQAVYKIRV 269 (546)
T ss_dssp EEEEEEEEHHHHTSCEEECCEEEEEECCCCCCCCBSCSEEEEEEESS-SCCCEEEEECBC--CCSCTTSTTSCEECCBSC
T ss_pred EEEEEEEEECCCCCcceEEEEEEEEeecCCCCCccccccceEEEEeC-CCCCEEEEEEEE--eCCCCCCCCcEEEEEEEe
Confidence 99999999999888999999999999999999999999999999999 999999999999 888 7889999998865
No 3
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=100.00 E-value=3e-43 Score=336.36 Aligned_cols=224 Identities=27% Similarity=0.408 Sum_probs=203.4
Q ss_pred EecCCCcEEEEEEeC----CCCceEEEECCccEEEECcCCCceeccEEEEEEEEEeC-CCCceeEEEEEEEEEecCCCCC
Q psy11062 5 LLDQSNPIRYTIHSG----DPEGYFTLDSTTGVIRTAATLDHEVTGVLLLSVQASSG-SPPLYSYAQVKVTIEDRNDNAP 79 (281)
Q Consensus 5 d~d~~~~l~Y~i~~g----~~~~~F~Id~~~G~i~~~~~LD~E~~~~~~l~v~a~dg-~~~~~~~~~v~i~V~dvNd~~P 79 (281)
|.|.++.|+|+|.++ ++.++|.|++.+|.|++.++||||+.+.|.|.|.|.|+ .++.++++.|.|.|.|+|||+|
T Consensus 27 d~d~~~~v~Ysi~~~~~~~~~~~~F~Id~~tG~l~~~~~LDrE~~~~y~l~v~a~d~~~~~~~~~~~v~I~V~DvNDn~P 106 (550)
T 3q2v_A 27 NRDKETKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRP 106 (550)
T ss_dssp GGGGTSCEEEEEESBTTTBSSCSSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTSCBCSCCEEEEEEEECCSCCCC
T ss_pred CCCCCceEEEEEECCCCCCCCCceEEEeCCceEEEECCccCcccCCeeEEEEEEEeCCCCcccceEEEEEEEEecCCCCC
Confidence 677889999999862 34579999999999999999999999999999999975 4456678899999999999999
Q ss_pred eeccCcEEEEEeCCCCCCceEEEEEEEeCCCC---CCceEEEEEeeCCCC--CceeeEEeCceeEEEE-ceecCccCcce
Q psy11062 80 EFESTTIRLSVPESAALGLPLYTVVARDKDSG---DNGKIRYHLASGNFG--DSRLFAVDQTSGHLSL-SKHLDYETSQR 153 (281)
Q Consensus 80 ~f~~~~~~~~v~En~~~gt~v~~v~a~D~D~g---~~~~i~y~l~~~~~~--~~~~F~id~~tG~i~~-~~~LD~E~~~~ 153 (281)
.|.+..|.+.|+|++++|+.++++.|+|+|.| .|+.++|+|..+++. ....|.|++.+|.|.+ .++||||....
T Consensus 107 ~F~~~~y~~~V~E~~~~Gt~v~~v~A~D~D~g~~~~N~~i~Ysi~~~~~~~~~~~~F~id~~tG~i~~~~~~LDrE~~~~ 186 (550)
T 3q2v_A 107 EFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTSGLDRESYPT 186 (550)
T ss_dssp CBSCSEEEEEEETTCCTTCEEEECCBCCCSCTTTCGGGCCEEEEEEEESCCSSSCSEEECTTTCEEEECSSCCCTTTCSE
T ss_pred ccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCcceEEEEEEecCCCCCCcCCceEEcCCCeEEEEccCCCCcccCcE
Confidence 99999999999999999999999999999998 789999999875432 3578999999999987 57999999999
Q ss_pred EEEEEEEEECCCCCCeEEEEEEEEEEeCCCCCCeeeCCceEEEEeCCCCCCcEEEEEEeeEEEeecCcccc--EEEEEee
Q psy11062 154 HTIVVSATDQGDPPMSSNLTVLLEVQDVNDNPPVFERSEYFVSVSEALPAKSQVRTTCTPLYVLVEGQCSL--VCWSTLR 231 (281)
Q Consensus 154 y~l~V~a~D~~~p~~~~~~~v~I~V~DvND~~P~f~~~~y~~~v~E~~~~gt~v~~v~A~~yd~d~g~~~~--~~~~~~~ 231 (281)
|.|.|+|+|++.+++++++.|+|.|.|+|||+|+|.+..|.+.|+|+ ++|+.|+++.|+ |.|.|.++. +.|++..
T Consensus 187 y~l~V~A~D~g~~~~s~t~~v~I~V~DvNDn~P~F~~~~y~~~V~En-~~g~~v~~v~a~--D~D~~~n~~~~~~ysi~~ 263 (550)
T 3q2v_A 187 YTLVVQAADLQGEGLSTTAKAVITVKDINDNAPVFNPSTYQGQVPEN-EVNARIATLKVT--DDDAPNTPAWKAVYTVVN 263 (550)
T ss_dssp EEEEEEEESGGGTSCCCEEEEEEEEECCSCSCCEESSSEEEEEEESS-CSSCCCEEECEE--CCSCTTSTTTCEEEEESS
T ss_pred EEEEEEEEcCCCCCeeEEEEEEEEecccCCCCCEEecceeEEEEecC-CCCCEEEEEEEE--ECCCCCCCcEEEEEEEEe
Confidence 99999999998889999999999999999999999999999999999 999999999999 999988875 4587764
No 4
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=100.00 E-value=2.1e-42 Score=331.09 Aligned_cols=225 Identities=25% Similarity=0.353 Sum_probs=199.7
Q ss_pred EecCCCcEEEEEEeCCC----CceEEEECCccEEEECcCCCceeccEEEEEEEEEeCC-CCceeEEEEEEEEEecCCCCC
Q psy11062 5 LLDQSNPIRYTIHSGDP----EGYFTLDSTTGVIRTAATLDHEVTGVLLLSVQASSGS-PPLYSYAQVKVTIEDRNDNAP 79 (281)
Q Consensus 5 d~d~~~~l~Y~i~~g~~----~~~F~Id~~~G~i~~~~~LD~E~~~~~~l~v~a~dg~-~~~~~~~~v~i~V~dvNd~~P 79 (281)
|.|.|+.|+|+|.++.. .++|.|++.+|.|++.++||||+.+.|.|.|.|.|+. +..++++.|.|.|.|+|||+|
T Consensus 27 D~~~n~~i~Ysi~~~~~~~~~~~~F~id~~tG~l~~~~~LDrE~~~~y~l~v~a~D~g~~~~~~~~~v~I~V~DvNDn~P 106 (559)
T 3q2w_A 27 DRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAVDINGNQVENPIDIVINVIDMNDNRP 106 (559)
T ss_dssp GGGGTSCEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTSCEEEEEEEEEEEEECCCCCCC
T ss_pred CCCCCcEEEEEEECCCCCCCCCceEEEeCCceEEEECCccCCCCCceEEEEEEEEECCCCccceeEEEEEEEEeCCCCCC
Confidence 45678899999986432 3799999999999999999999999999999999754 456788999999999999999
Q ss_pred eeccCcEEEEEeCCCCCCceEEEEEEEeCCCC--CCceEEEEEeeCCCC--CceeeEEeCceeEEEEce-ecCccCcceE
Q psy11062 80 EFESTTIRLSVPESAALGLPLYTVVARDKDSG--DNGKIRYHLASGNFG--DSRLFAVDQTSGHLSLSK-HLDYETSQRH 154 (281)
Q Consensus 80 ~f~~~~~~~~v~En~~~gt~v~~v~a~D~D~g--~~~~i~y~l~~~~~~--~~~~F~id~~tG~i~~~~-~LD~E~~~~y 154 (281)
.|.+..|.+.|+|++++|+.++++.|+|+|.| .|+.++|+|..+.+. ....|.|++.+|.|++.+ +||||....|
T Consensus 107 ~F~~~~y~~~V~En~~~Gt~v~~v~A~D~D~g~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y 186 (559)
T 3q2w_A 107 EFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRILSQAPSTPSPNMFTINNETGDIITVAAGLDREKVQQY 186 (559)
T ss_dssp EESCSEEEEEEETTCCTTCEEEECCEECSSCTTSGGGCCEEEEEEEESCCSCTTCEEECTTTCEEEECCSCCCTTTCCEE
T ss_pred ccCCCeeEEEEeCCCCCCcEEEEEEEEcCCCCCCCceEEEEEEecCCCCCCCcceEEEeCCceEEEEEeccCCcccCCEE
Confidence 99999999999999999999999999999987 689999999865321 126899999999999988 9999999999
Q ss_pred EEEEEEEECCC---CCCeEEEEEEEEEEeCCCCCCeeeCCceEEEEeCCCCCCcEEEEEEeeEEEeecCc--cccEEEEE
Q psy11062 155 TIVVSATDQGD---PPMSSNLTVLLEVQDVNDNPPVFERSEYFVSVSEALPAKSQVRTTCTPLYVLVEGQ--CSLVCWST 229 (281)
Q Consensus 155 ~l~V~a~D~~~---p~~~~~~~v~I~V~DvND~~P~f~~~~y~~~v~E~~~~gt~v~~v~A~~yd~d~g~--~~~~~~~~ 229 (281)
.|.|+|+|+++ ++++++++|+|.|.|+|||+|+|....|.+.|+|+. +|+.|+++.|+ |.|.|. ++.+.|++
T Consensus 187 ~l~V~A~D~~g~p~~~~s~t~~v~I~V~DvNDn~P~f~~~~y~~~V~En~-~g~~v~~v~a~--D~D~~~~~n~~~~y~i 263 (559)
T 3q2w_A 187 TLIIQATDMEGNPTYGLSNTATAVITVTDVNDNPPEFTAMTFYGEVPENR-VDVIVANLTVT--DKDQPHTPAWNAAYRI 263 (559)
T ss_dssp EEEEEEEHHHHCTTTCCEEEEEEEEEEECCSCSCCEESSSEEEEEEESSC-SSEEEEEEEEE--CCSCTTSTTTSBCCEE
T ss_pred EEEEEEEECCCCCCCCccceEEEEEEEEeCCCCCCccccccceeEecCCC-CCcEEEEEEEE--cCCCCCCCceeEEEEE
Confidence 99999999854 358999999999999999999999999999999997 89999999999 888775 55777776
Q ss_pred eec
Q psy11062 230 LRL 232 (281)
Q Consensus 230 ~~~ 232 (281)
...
T Consensus 264 ~~g 266 (559)
T 3q2w_A 264 SGG 266 (559)
T ss_dssp EES
T ss_pred ecC
Confidence 543
No 5
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=100.00 E-value=8.9e-42 Score=316.24 Aligned_cols=257 Identities=22% Similarity=0.315 Sum_probs=218.2
Q ss_pred CEEEEecCCCcEEEEEEeCCCCceEEEECCccEEEECcCCCceeccEEEEEEEEEeCCC-----CceeEEEEEEEEEecC
Q psy11062 1 MKILLLDQSNPIRYTIHSGDPEGYFTLDSTTGVIRTAATLDHEVTGVLLLSVQASSGSP-----PLYSYAQVKVTIEDRN 75 (281)
Q Consensus 1 ~~~~d~d~~~~l~Y~i~~g~~~~~F~Id~~~G~i~~~~~LD~E~~~~~~l~v~a~dg~~-----~~~~~~~v~i~V~dvN 75 (281)
++|+|.|.+..+.|+|..++..++|.|++.+|.|++.+.||+|....|.|+|.|.|+.+ ++++++.++|.|.| |
T Consensus 135 v~A~D~D~g~n~~y~i~~~~~~~~F~I~~~tG~i~~~~~ld~e~~~~y~l~V~A~D~g~~~~~~~~~~t~~v~I~V~d-n 213 (419)
T 3ubh_A 135 LQARDPDTDHNIHYFIVRDRTGGRFEVDERSGVVRTRGTDLFQLDMEYVLYVKAEDQNGKVDDRRFQSTPEERLSIVG-G 213 (419)
T ss_dssp CCEECSSTTCCEEEEEEEESSSSCEEECTTTCEEEECSSSCCCBTCEEEEEEEEEEEEEEC--CCEEECCCEEEEEEE-S
T ss_pred EEEECCCCCceeEEEEEeCCCCCeEEEeCCceEEEEecccccccccEEEEEEEEEECCCCccCcccccceEEEEEEEC-C
Confidence 56888888888999999888888999999999999999999999999999999997532 45778889999999 9
Q ss_pred CCCCeeccCcEEEEEeCCCCCCceEEEEEEEeCCCCCCceEEEEEeeCCCCCceeeEEeCceeEEEEceecCccCcc---
Q psy11062 76 DNAPEFESTTIRLSVPESAALGLPLYTVVARDKDSGDNGKIRYHLASGNFGDSRLFAVDQTSGHLSLSKHLDYETSQ--- 152 (281)
Q Consensus 76 d~~P~f~~~~~~~~v~En~~~gt~v~~v~a~D~D~g~~~~i~y~l~~~~~~~~~~F~id~~tG~i~~~~~LD~E~~~--- 152 (281)
||+|.|.+..|.+.|+||.++|+.++++.|+|+| ++.++|+|..+. +...+|.|++.+|.|++.++||||...
T Consensus 214 dn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~d---n~~i~Ysi~~~~-~~~~~F~I~~~tG~i~~~~~LD~E~~~~~~ 289 (419)
T 3ubh_A 214 KRAPQFYMPSYEAEIPENQKKDSDIISIKAKSFA---DREIRYTLKAQG-QGAGTFNIGPTSGIVKLAKELDFEDLRQPH 289 (419)
T ss_dssp CCCCEESSSCEEEEEETTCCTTCEEEECCEECSS---CCCCEEEEEESS-SCCSSEEECTTTCEEEECSCCCTTCTTSCS
T ss_pred CCCCceecCeeEEEecCCCCCCcEEEEEEEecCC---CCceEEEEecCC-CCCCcEEEECCCCEEEECcccCcccccccc
Confidence 9999999999999999999999999999999997 678999998421 346899999999999999999999865
Q ss_pred eEEEEEEEEECCCCCCeEEEEEEEEEEeCCCCCCeeeCCceEE-EEeCCCCCCcEEEEEEeeEEEeecCccccEEEEEee
Q psy11062 153 RHTIVVSATDQGDPPMSSNLTVLLEVQDVNDNPPVFERSEYFV-SVSEALPAKSQVRTTCTPLYVLVEGQCSLVCWSTLR 231 (281)
Q Consensus 153 ~y~l~V~a~D~~~p~~~~~~~v~I~V~DvND~~P~f~~~~y~~-~v~E~~~~gt~v~~v~A~~yd~d~g~~~~~~~~~~~ 231 (281)
.|.|.|+|+|.+ +++++++.|+|+|.|+|||+|.|..+.|.. .|+|+.++|+.|++|.|+ |.|.|.|+.++|++..
T Consensus 290 ~y~l~V~a~dd~-~~~s~~~~v~I~V~DvNDn~P~f~~~~~~~~~v~E~~~~gt~v~~v~A~--D~D~g~n~~v~Y~i~~ 366 (419)
T 3ubh_A 290 VYSLIVTATEDS-GGFSTSVDLTIRVTDVNDNAPKFELPDYQAHNVDEDIPLGTSILRVKAM--DSDSGSNAEIEYLVSD 366 (419)
T ss_dssp EEEEEEEEECTT-TSCEEEEEEEEEEECCCCCCCEESSSEEEEEEEETTCCTTCEEEECCEE--CSSCGGGGCEEEEESC
T ss_pred EEEEEEEEEeCC-CCcEEEEEEEEEEEccCCCCCcccCCcceeEEecCCCCCCCEEEEEEEE--eCCCCCCCEEEEEEcC
Confidence 799999999754 357899999999999999999999999987 799999999999999999 9999999999998854
Q ss_pred cCChhhhhccCCCCCCCCcceEE-EEEEEEEEecCcc
Q psy11062 232 LMTHSTLKSELNSPLGSNSFQLS-ILWYSIFLRTNTM 267 (281)
Q Consensus 232 ~~~~~~l~~~~~~~~~~~~~~~~-~~~y~~~~~~~~~ 267 (281)
+.+.++..|...+....-.-. ...|+|.|+..++
T Consensus 367 --~~F~Id~~G~i~~~~~ld~E~~~~~y~l~V~a~D~ 401 (419)
T 3ubh_A 367 --DHFAVDSNGIIVNNKQLDADNNNAYYEFIVTAKDK 401 (419)
T ss_dssp --TTEEECTTCEEEECSCSSSSCTTCEEEEEEEEEEC
T ss_pred --CcEEECCCeEEEECcccCcccCCceEEEEEEEEEC
Confidence 345554344332222222222 3568888876664
No 6
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=100.00 E-value=5.4e-41 Score=300.14 Aligned_cols=253 Identities=17% Similarity=0.212 Sum_probs=199.5
Q ss_pred EEEEec--CCCcEEEEEEeCCCC---------ceEEEECCccEEEECcCCCceec-----cEEEEEEEEEeCCC--Ccee
Q psy11062 2 KILLLD--QSNPIRYTIHSGDPE---------GYFTLDSTTGVIRTAATLDHEVT-----GVLLLSVQASSGSP--PLYS 63 (281)
Q Consensus 2 ~~~d~d--~~~~l~Y~i~~g~~~---------~~F~Id~~~G~i~~~~~LD~E~~-----~~~~l~v~a~dg~~--~~~~ 63 (281)
+|+|.| .++.+.|+|..+++. .+|.|++ +|.|+++++||||.. ..|.|.|.|.++.. ++++
T Consensus 10 ~atd~D~g~ng~v~y~l~~~~~~~~f~i~~~~~~F~i~~-tG~l~~~~~LD~E~~~~~~~~~~~l~v~a~d~~~~~~~s~ 88 (316)
T 3ubf_A 10 EFTEADGDTEGKSVFQLEKETDKETFKIRDDNPWVTVET-NGAVRVKKKWDYEELGPEKTIDFWVIITNMGHNAGIKYTD 88 (316)
T ss_dssp EEESGGGCSTTCEEEECCCSSTTCEEEESSCCSSEEECT-TSEEEESSCCCGGGSCTTCEEEEEEEEEC-------CCCE
T ss_pred EEEecCCCCCceEEEEEEcCCCcceEEEeCCCCeEEECC-CeEEEECCccChhhcccccceEEEEEEEEcCCCCCCcccc
Confidence 445553 467788888765543 4577777 999999999999994 46888888887653 4688
Q ss_pred EEEEEEEEEecCCCCCeeccCc--EEEEEeCCCCCCceEEEEEEEeCCCCCCceEEEEEeeCCCCCceeeEEeCceeEEE
Q psy11062 64 YAQVKVTIEDRNDNAPEFESTT--IRLSVPESAALGLPLYTVVARDKDSGDNGKIRYHLASGNFGDSRLFAVDQTSGHLS 141 (281)
Q Consensus 64 ~~~v~i~V~dvNd~~P~f~~~~--~~~~v~En~~~gt~v~~v~a~D~D~g~~~~i~y~l~~~~~~~~~~F~id~~tG~i~ 141 (281)
++.|+|.|.|+|||+|.|.... |.+.|+|+.++|+.++++.|+|+|.|.+ ++|+|..++ ..+.|.|++.+|.|+
T Consensus 89 ~~~v~I~V~DvNDn~P~F~~~~~~y~~~v~En~~~gt~v~~v~A~D~D~g~n--i~Y~i~~~~--~~~~F~Id~~tG~i~ 164 (316)
T 3ubf_A 89 NQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDTDHN--IHYFIVRDR--TGGRFEVDERSGVVR 164 (316)
T ss_dssp EEEEEEEEECTTCCCCEECCSSSSEEEEECTTCCTTCEEEECCEECSSTTCC--EEEEEEEEE--SSSCEEECTTTCEEE
T ss_pred eEEEEEEEEECCCCCCccCCCCCCEEEEEeCCCCCCCEEEEEEEECCCCCCc--eEEEEEeCC--CCCEEEEECCccEEE
Confidence 9999999999999999999876 8999999999999999999999999877 999998653 467999999999999
Q ss_pred EceecCccCcceEEEEEEEEECCC----CCCeEEEEEEEEEEeCCCCCCeeeCCceEEEEeCCCCCCcEEEEEEeeEEEe
Q psy11062 142 LSKHLDYETSQRHTIVVSATDQGD----PPMSSNLTVLLEVQDVNDNPPVFERSEYFVSVSEALPAKSQVRTTCTPLYVL 217 (281)
Q Consensus 142 ~~~~LD~E~~~~y~l~V~a~D~~~----p~~~~~~~v~I~V~DvND~~P~f~~~~y~~~v~E~~~~gt~v~~v~A~~yd~ 217 (281)
+.++||||....|.|.|+|+|+++ |++++++.|+|.|.| |||+|.|.+..|.+.|+|+.++|+.|+++.|+ |.
T Consensus 165 ~~~~lD~e~~~~y~l~V~A~D~g~~~~~~~~~~~~~v~I~V~d-nDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~--D~ 241 (316)
T 3ubf_A 165 TRGTDLFQLDMEYVLYVKAEDQNGKVDDRRFQSTPEERLSIVG-GKRAPQFYMPSYEAEIPENQKKDSDIISIKAK--SF 241 (316)
T ss_dssp ECSSCCCCTTCEEEEEEEEEESCC-------CBCCCEEEEEEE-SCCCCEESSSSEEEEEETTCCTTCEEEECCEE--CT
T ss_pred ECCcCCcccCcEEEEEEEEEeCCCCCCCccccceEEEEEEEEc-CCCCCEEcCCCceEEEeCCCCCCCEEEEEEEE--eC
Confidence 999999999999999999999985 457888999999999 99999999999999999999999999999998 55
Q ss_pred ecCccccEEEEEee-c--CChhhhh-ccCCCCCCCCcceEEE---EEEEEEEecC
Q psy11062 218 VEGQCSLVCWSTLR-L--MTHSTLK-SELNSPLGSNSFQLSI---LWYSIFLRTN 265 (281)
Q Consensus 218 d~g~~~~~~~~~~~-~--~~~~~l~-~~~~~~~~~~~~~~~~---~~y~~~~~~~ 265 (281)
| ++.++|++.. . ...+.++ ..|...+....-.-.. ..|+|.|++.
T Consensus 242 D---n~~i~Y~i~~~~~~~~~F~Id~~tG~i~~~~~LD~E~~~~~~~y~l~V~A~ 293 (316)
T 3ubf_A 242 A---DREIRYTLKAQGQGAGTFNIGPTSGIVKLAKELDFEDLRQPHVYSLIVTAT 293 (316)
T ss_dssp T---CCCEEEEEEEESSCTTTEEECTTTCEEEECSCCCSSCTTSCSEEEEEEEEE
T ss_pred C---CCEEEEEEEcCCCCCCeEEEECCeEEEEECCcCCccccCCCceEEEEEEEE
Confidence 3 6889998862 2 2333343 2333322222211222 4688888765
No 7
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=100.00 E-value=1.1e-41 Score=340.18 Aligned_cols=224 Identities=27% Similarity=0.379 Sum_probs=204.6
Q ss_pred EecCCCcEEEEEEeCC----CCceEEEECCccEEEECcCCCceeccEEEEEEEEEeCC-CCceeEEEEEEEEEecCCCCC
Q psy11062 5 LLDQSNPIRYTIHSGD----PEGYFTLDSTTGVIRTAATLDHEVTGVLLLSVQASSGS-PPLYSYAQVKVTIEDRNDNAP 79 (281)
Q Consensus 5 d~d~~~~l~Y~i~~g~----~~~~F~Id~~~G~i~~~~~LD~E~~~~~~l~v~a~dg~-~~~~~~~~v~i~V~dvNd~~P 79 (281)
|.|.++.++|+|.++. +.++|.|++.+|.|++.++||||+...|.|.|.|.|+. ++.++++.|+|.|.|+|||+|
T Consensus 182 d~d~~~~v~Ysi~~~~~~~~~~~~F~Id~~tG~l~~~~~LDrE~~~~y~l~v~A~D~g~~~~~~~~~v~I~V~DvNDn~P 261 (880)
T 1q55_A 182 NKDRFNKVYYSITGQGADNPPQGVFRIEWETGWMLVTRPLDREEYDKYVLSSHAVSENGSPVEEPMEITINVIDQNDNRP 261 (880)
T ss_dssp SGGGSSCEEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEESSSCBCSCCEEEEEEEECCSCCCC
T ss_pred CCCCCceEEEEEECCCCCCCcCCEEEEECCcCEEEECCccCccccCccEEEEEEEECCCCceeeeEEEEEEEEecCCCCC
Confidence 4456789999998653 34689999999999999999999999999999999754 456788999999999999999
Q ss_pred eeccCcEEEEEeCCCCCCceEEEEEEEeCCCC---CCceEEEEEeeCCCC--CceeeEEeCceeEEEEc-eecCccCcce
Q psy11062 80 EFESTTIRLSVPESAALGLPLYTVVARDKDSG---DNGKIRYHLASGNFG--DSRLFAVDQTSGHLSLS-KHLDYETSQR 153 (281)
Q Consensus 80 ~f~~~~~~~~v~En~~~gt~v~~v~a~D~D~g---~~~~i~y~l~~~~~~--~~~~F~id~~tG~i~~~-~~LD~E~~~~ 153 (281)
.|.+..|.+.|+|++++|+.++++.|+|+|.| .|+.++|+|..+.+. ....|.|++.+|.|++. ++||||....
T Consensus 262 ~F~~~~y~~~V~En~~~Gt~V~~v~AtD~D~g~~~~N~~v~Ysi~~~~~~~~~~~~F~Id~~tG~I~~~~~~LDrE~~~~ 341 (880)
T 1q55_A 262 KFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIPNLFTINRETGVISLIGTGLDREKFPE 341 (880)
T ss_dssp EESSSCEEEEEETTCCSSEEEEECCEECCSCCSSSSTTCCEEEEEEESSCCSCSCSEEECTTTCEEEECSCCCCTTTCCE
T ss_pred CccCCcEEEEEeCCCCCCceeEEEEEEcCCCCCCCcCcEEEEEEcCCCCCcccCCeEEEccCCccEEEecccCCHHHcce
Confidence 99999999999999999999999999999998 689999999976421 45799999999999985 7899999999
Q ss_pred EEEEEEEEECCCCCCeEEEEEEEEEEeCCCCCCeeeCCceEEEEeCCCCCCcEEEEEEeeEEEee--cCccccEEEEEee
Q psy11062 154 HTIVVSATDQGDPPMSSNLTVLLEVQDVNDNPPVFERSEYFVSVSEALPAKSQVRTTCTPLYVLV--EGQCSLVCWSTLR 231 (281)
Q Consensus 154 y~l~V~a~D~~~p~~~~~~~v~I~V~DvND~~P~f~~~~y~~~v~E~~~~gt~v~~v~A~~yd~d--~g~~~~~~~~~~~ 231 (281)
|.|.|+|+|++.|+++++++|+|+|.|+|||+|+|....|.+.|+|+ ++|+.|+++.|+ |.| .|.|+.+.|++..
T Consensus 342 y~l~V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En-~~gt~V~~v~A~--D~D~~~g~n~~v~Ysi~~ 418 (880)
T 1q55_A 342 YTLTVQATDLEGAGLSVEGKAIIQITDANDNAPIFDPKTYTALVPEN-EIGFEVQRLSVT--DLDMPGTPAWQAVYKIRV 418 (880)
T ss_dssp EEEEEEEEHHHHTSCEEECCEEEEEECCCCCCCCBSCSEEEEEEESS-SCCCEEEEECBC--CCSCTTSTTSCEECCBSC
T ss_pred eEEEEEEEECCCCCccceeEEEEEEEeccCCCCCccccceEEEeecC-CCCcEEEEEEEE--CCCCCCCCCceEEEEEec
Confidence 99999999999888999999999999999999999999999999999 999999999999 888 7889999998865
No 8
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=100.00 E-value=1.3e-40 Score=318.25 Aligned_cols=224 Identities=29% Similarity=0.377 Sum_probs=203.5
Q ss_pred CEEEEecC-----CCcEEEEEEeCCC----CceEEEECCccEEEE-CcCCCceeccEEEEEEEEEeC-CCCceeEEEEEE
Q psy11062 1 MKILLLDQ-----SNPIRYTIHSGDP----EGYFTLDSTTGVIRT-AATLDHEVTGVLLLSVQASSG-SPPLYSYAQVKV 69 (281)
Q Consensus 1 ~~~~d~d~-----~~~l~Y~i~~g~~----~~~F~Id~~~G~i~~-~~~LD~E~~~~~~l~v~a~dg-~~~~~~~~~v~i 69 (281)
++|+|.|. |+.+.|+|.++++ .++|+|++.+|.|++ .++||||+...|.|.|.|+|+ .+++++++.|+|
T Consensus 130 v~A~D~D~g~~~~N~~i~Ysi~~~~~~~~~~~~F~id~~tG~i~~~~~~LDrE~~~~y~l~V~A~D~g~~~~s~t~~v~I 209 (550)
T 3q2v_A 130 VSATDADDDVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGEGLSTTAKAVI 209 (550)
T ss_dssp CCBCCCSCTTTCGGGCCEEEEEEEESCCSSSCSEEECTTTCEEEECSSCCCTTTCSEEEEEEEEESGGGTSCCCEEEEEE
T ss_pred EEEEeCCCCCCCcceEEEEEEecCCCCCCcCCceEEcCCCeEEEEccCCCCcccCcEEEEEEEEEcCCCCCeeEEEEEEE
Confidence 35677775 4789999997653 468999999999998 589999999999999999974 567889999999
Q ss_pred EEEecCCCCCeeccCcEEEEEeCCCCCCceEEEEEEEeCCCCCCc--eEEEEEeeCCCCCceeeEEe----CceeEEEEc
Q psy11062 70 TIEDRNDNAPEFESTTIRLSVPESAALGLPLYTVVARDKDSGDNG--KIRYHLASGNFGDSRLFAVD----QTSGHLSLS 143 (281)
Q Consensus 70 ~V~dvNd~~P~f~~~~~~~~v~En~~~gt~v~~v~a~D~D~g~~~--~i~y~l~~~~~~~~~~F~id----~~tG~i~~~ 143 (281)
.|.|+|||+|.|....|.+.|+|+ ++|+.++++.|+|+|.+.++ .++|+|.. ...+.|.|+ +.+|.|++.
T Consensus 210 ~V~DvNDn~P~F~~~~y~~~V~En-~~g~~v~~v~a~D~D~~~n~~~~~~ysi~~---~~~~~F~i~~d~~~~tG~i~~~ 285 (550)
T 3q2v_A 210 TVKDINDNAPVFNPSTYQGQVPEN-EVNARIATLKVTDDDAPNTPAWKAVYTVVN---DPDQQFVVVTDPTTNDGILKTA 285 (550)
T ss_dssp EEECCSCSCCEESSSEEEEEEESS-CSSCCCEEECEECCSCTTSTTTCEEEEESS---CSSCCEEEEECTTTCCEEEEES
T ss_pred EecccCCCCCEEecceeEEEEecC-CCCCEEEEEEEEECCCCCCCcEEEEEEEEe---CCCCcEEEEecCCCccEEEEec
Confidence 999999999999999999999999 99999999999999998877 46699987 357889998 689999999
Q ss_pred eecCccCcceEEEEEEEEECCC---CCCeEEEEEEEEEEeCCCCCCeeeCCceEEEEeCCCCCCcEEEEEEeeEEEeecC
Q psy11062 144 KHLDYETSQRHTIVVSATDQGD---PPMSSNLTVLLEVQDVNDNPPVFERSEYFVSVSEALPAKSQVRTTCTPLYVLVEG 220 (281)
Q Consensus 144 ~~LD~E~~~~y~l~V~a~D~~~---p~~~~~~~v~I~V~DvND~~P~f~~~~y~~~v~E~~~~gt~v~~v~A~~yd~d~g 220 (281)
++||||....|.|.|+|+|++. +.+++++.|+|.|+|+|| +|.|....|.+.|+|+.++|+.|+++.|+ |.|.|
T Consensus 286 ~~LD~E~~~~y~l~V~a~D~~~~~~~~~~~~~~v~I~V~DvND-~P~f~~~~~~~~v~E~~~~gt~v~~v~A~--D~D~g 362 (550)
T 3q2v_A 286 KGLDFEAKQQYILHVRVENEEPFEGSLVPSTATVTVDVVDVNE-APIFMPAERRVEVPEDFGVGQEITSYTAR--EPDTF 362 (550)
T ss_dssp SCCCTTTCSEEEEEEEEEESSCCCSSCCCEEEEEEEEEECCCC-CCEESSSSCEEEEETTCCSSCEEEECCEE--CCCCS
T ss_pred ccCCccccceEEEEEEEEeCCCCCCCccceEEEEEEEEEecCC-CCeEcCcceEEEEecCCCCCCEEEEEeCC--CCCCC
Confidence 9999999999999999999874 457899999999999999 99999999999999999999999999999 99999
Q ss_pred ccccEEEEEee
Q psy11062 221 QCSLVCWSTLR 231 (281)
Q Consensus 221 ~~~~~~~~~~~ 231 (281)
.++.++|++..
T Consensus 363 ~n~~i~y~i~~ 373 (550)
T 3q2v_A 363 MDQKITYRIWR 373 (550)
T ss_dssp TTCCCEEEEEE
T ss_pred CCCCEEEEEec
Confidence 99999998854
No 9
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=100.00 E-value=3.7e-40 Score=315.55 Aligned_cols=226 Identities=28% Similarity=0.373 Sum_probs=204.2
Q ss_pred CEEEEecC----CCcEEEEEEeCCCC----ceEEEECCccEEEECc-CCCceeccEEEEEEEEEeC-C---CCceeEEEE
Q psy11062 1 MKILLLDQ----SNPIRYTIHSGDPE----GYFTLDSTTGVIRTAA-TLDHEVTGVLLLSVQASSG-S---PPLYSYAQV 67 (281)
Q Consensus 1 ~~~~d~d~----~~~l~Y~i~~g~~~----~~F~Id~~~G~i~~~~-~LD~E~~~~~~l~v~a~dg-~---~~~~~~~~v 67 (281)
++|+|.|. |+.++|+|.++.+. ++|.|++.+|.|++.+ .||||+...|.|.|.|+|+ . +++++++.|
T Consensus 130 v~A~D~D~g~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~A~D~~g~p~~~~s~t~~v 209 (559)
T 3q2w_A 130 VTAIDADDPNALNGMLRYRILSQAPSTPSPNMFTINNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSNTATA 209 (559)
T ss_dssp CCEECSSCTTSGGGCCEEEEEEEESCCSCTTCEEECTTTCEEEECCSCCCTTTCCEEEEEEEEEHHHHCTTTCCEEEEEE
T ss_pred EEEEcCCCCCCCceEEEEEEecCCCCCCCcceEEEeCCceEEEEEeccCCcccCCEEEEEEEEEECCCCCCCCccceEEE
Confidence 46788884 67899999876543 7899999999999987 9999999999999999974 2 357899999
Q ss_pred EEEEEecCCCCCeeccCcEEEEEeCCCCCCceEEEEEEEeCCCCC--CceEEEEEeeCCCCCceeeEE----eCceeEEE
Q psy11062 68 KVTIEDRNDNAPEFESTTIRLSVPESAALGLPLYTVVARDKDSGD--NGKIRYHLASGNFGDSRLFAV----DQTSGHLS 141 (281)
Q Consensus 68 ~i~V~dvNd~~P~f~~~~~~~~v~En~~~gt~v~~v~a~D~D~g~--~~~i~y~l~~~~~~~~~~F~i----d~~tG~i~ 141 (281)
+|.|.|+|||+|.|....|.+.|+|+. +|+.++.+.|+|+|.+. ++.++|+|..++ ..+.|.| +..+|.|+
T Consensus 210 ~I~V~DvNDn~P~f~~~~y~~~V~En~-~g~~v~~v~a~D~D~~~~~n~~~~y~i~~g~--~~~~F~I~~~~~~~~G~i~ 286 (559)
T 3q2w_A 210 VITVTDVNDNPPEFTAMTFYGEVPENR-VDVIVANLTVTDKDQPHTPAWNAAYRISGGD--PTGRFAILTDPNSNDGLVT 286 (559)
T ss_dssp EEEEECCSCSCCEESSSEEEEEEESSC-SSEEEEEEEEECCSCTTSTTTSBCCEEEESC--TTCCEEEEECTTTCEEEEE
T ss_pred EEEEEeCCCCCCccccccceeEecCCC-CCcEEEEEEEEcCCCCCCCceeEEEEEecCC--CCCceEEEecCCCCcEEEE
Confidence 999999999999999999999999997 89999999999999875 668999999864 4678999 57899999
Q ss_pred EceecCccCcceEEEEEEEEECC------CCCCeEEEEEEEEEEeCCCCCCeeeCCceEEEEeCCCCCCcEEEEEEeeEE
Q psy11062 142 LSKHLDYETSQRHTIVVSATDQG------DPPMSSNLTVLLEVQDVNDNPPVFERSEYFVSVSEALPAKSQVRTTCTPLY 215 (281)
Q Consensus 142 ~~~~LD~E~~~~y~l~V~a~D~~------~p~~~~~~~v~I~V~DvND~~P~f~~~~y~~~v~E~~~~gt~v~~v~A~~y 215 (281)
+.++||||....|.|+|.|+|++ .|+++++++|+|.|.|+|| +|.|.+..|.+.|+|+.++|+.|++|.|+
T Consensus 287 ~~~~LD~E~~~~y~l~V~A~D~~~~~~g~~~~~~s~~~v~I~V~DvND-~P~f~~~~~~~~v~En~~~g~~v~~v~A~-- 363 (559)
T 3q2w_A 287 VVKPIDFETNRMFVLTVAAENQVPLAKGIQHPPQSTATVSVTVIDVNE-NPYFAPNPKIIRQEEGLHAGTMLTTLTAQ-- 363 (559)
T ss_dssp ECSCCCTTTCSEEEEEEECCBSSCCCTTCCCCGGGEEEEEEEEECCCC-CCEESSSEEEEEEESCCCTTCEEEECCEE--
T ss_pred eCCCCCCccCceEEEEEEEEcCCccccCCCCCCceEEEEEEEEEeCCC-CCcccccceEEEEeCCCCCCCEEEEEEEE--
Confidence 99999999999999999999974 3568899999999999999 69999999999999999999999999999
Q ss_pred EeecCccccEEEEEeec
Q psy11062 216 VLVEGQCSLVCWSTLRL 232 (281)
Q Consensus 216 d~d~g~~~~~~~~~~~~ 232 (281)
|.|.|.++.++|++...
T Consensus 364 D~D~g~n~~i~Ysi~~~ 380 (559)
T 3q2w_A 364 DPDRYMQQNIRYTKLSD 380 (559)
T ss_dssp CSCSSSCCCEEEEEEEC
T ss_pred CCCCCCCCceEEEEccC
Confidence 99999999999988653
No 10
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=100.00 E-value=4.3e-41 Score=321.13 Aligned_cols=224 Identities=26% Similarity=0.365 Sum_probs=204.1
Q ss_pred CEEEEecC-----CCcEEEEEEeCCC----CceEEEECCccEEEEC-cCCCceeccEEEEEEEEEe-CCCCceeEEEEEE
Q psy11062 1 MKILLLDQ-----SNPIRYTIHSGDP----EGYFTLDSTTGVIRTA-ATLDHEVTGVLLLSVQASS-GSPPLYSYAQVKV 69 (281)
Q Consensus 1 ~~~~d~d~-----~~~l~Y~i~~g~~----~~~F~Id~~~G~i~~~-~~LD~E~~~~~~l~v~a~d-g~~~~~~~~~v~i 69 (281)
++|+|.|. |+.++|+|.++.+ .++|+|++.+|.|++. +.||||....|.|.|.|+| |.+++++++.|.|
T Consensus 136 v~A~D~D~g~~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~A~D~g~~~~s~~~~v~I 215 (546)
T 1l3w_A 136 VSATDEDDNIDSLNGVLSYSILKQDPEEPIPNLFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGAGLSVEGKAII 215 (546)
T ss_dssp CCEECCSCCSSSSTTCCEEEEEEESSCCSCSCSEEECTTTCEEEECSCCCCTTTCCEEEEEEEEEHHHHTSCEEECCEEE
T ss_pred EEEEcCCCCCCCCCCEEEEEEeCCCCCcccCCcEEEeCCCceEEEeccCCCcccCceEEEEEEEEECCCCCcceEEEEEE
Confidence 46788875 4899999998763 4799999999999985 7999999999999999996 4557889999999
Q ss_pred EEEecCCCCCeeccCcEEEEEeCCCCCCceEEEEEEEeCC--CCCCceEEEEEeeCCCCCceeeEEe----CceeEEEEc
Q psy11062 70 TIEDRNDNAPEFESTTIRLSVPESAALGLPLYTVVARDKD--SGDNGKIRYHLASGNFGDSRLFAVD----QTSGHLSLS 143 (281)
Q Consensus 70 ~V~dvNd~~P~f~~~~~~~~v~En~~~gt~v~~v~a~D~D--~g~~~~i~y~l~~~~~~~~~~F~id----~~tG~i~~~ 143 (281)
.|.|+|||+|.|....|.+.|+|+ ++|+.++++.|+|+| .|.|+.++|+|.. + ..+.|.|+ ..+|.|++.
T Consensus 216 ~V~DvNDn~P~F~~~~y~~~V~En-~~gt~v~~v~A~D~D~~~g~n~~v~y~i~~-~--~~~~F~I~~d~~~~~G~i~~~ 291 (546)
T 1l3w_A 216 QITDANDNAPIFDPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRV-N--EGGFFNITTDPESNQGILTTA 291 (546)
T ss_dssp EEECCCCCCCCBSCSEEEEEEESS-SCCCEEEEECBCCCSCTTSTTSCEECCBSC-C--TTSCEEEEECTTTCCEEEEES
T ss_pred EEeecCCCCCccccccceEEEEeC-CCCCEEEEEEEEeCCCCCCCCcEEEEEEEe-C--CCceEEEEecCCCCeEEEEEC
Confidence 999999999999999999999999 999999999999999 7789999999987 3 46789995 268999999
Q ss_pred eecCccCcceEEEEEEEEECCC---CCCeEEEEEEEEEEeCCCCCCeeeCCceEEEEeCCCCCCcEEEEEEeeEEEeecC
Q psy11062 144 KHLDYETSQRHTIVVSATDQGD---PPMSSNLTVLLEVQDVNDNPPVFERSEYFVSVSEALPAKSQVRTTCTPLYVLVEG 220 (281)
Q Consensus 144 ~~LD~E~~~~y~l~V~a~D~~~---p~~~~~~~v~I~V~DvND~~P~f~~~~y~~~v~E~~~~gt~v~~v~A~~yd~d~g 220 (281)
++||||....|.|.|+|+|++. |.++++++|+|.|.|+|| +|.|.+..|.+.|+|+.++|+.|+++.|+ |.|.|
T Consensus 292 ~~LD~E~~~~y~l~V~a~D~~~~~~~~~s~~~~v~I~V~DvND-~P~f~~~~y~~~V~En~~~g~~v~~v~A~--D~D~g 368 (546)
T 1l3w_A 292 KGLDFELRKQYVLQITVENAEPFSVPLPTSTATVTVTVEDVNE-APFFVPAVSRVDVSEDLSRGEKIISLVAQ--DPDKQ 368 (546)
T ss_dssp SCCCCSSCCCEEEEECCEESSCCSSCCCCCCEEEEEEEECCCC-CCEESSCEECCCBCTTCCSSEEEEECCEE--CCCTT
T ss_pred ccCCcccccEEEEEEEEEECCCCCCCCcceeEEEEEEEEcCCC-CCcEecceEEEEEeCCCCCCCEEEEEEEE--CCCCC
Confidence 9999999999999999999873 567899999999999999 99999999999999999999999999999 99999
Q ss_pred ccccEEEEEee
Q psy11062 221 QCSLVCWSTLR 231 (281)
Q Consensus 221 ~~~~~~~~~~~ 231 (281)
.++.++|++..
T Consensus 369 ~n~~i~ysi~~ 379 (546)
T 1l3w_A 369 QIQKLSYFIGN 379 (546)
T ss_dssp CCCCEEEEECC
T ss_pred CCceEEEEECC
Confidence 99999998865
No 11
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=100.00 E-value=6.1e-40 Score=303.90 Aligned_cols=220 Identities=19% Similarity=0.254 Sum_probs=194.7
Q ss_pred CEEEEec--CCCcEEEEEEeCCCCceEEEEC--------CccEEEECcCCCceec---cEEEEEEEEEeCC-C---Ccee
Q psy11062 1 MKILLLD--QSNPIRYTIHSGDPEGYFTLDS--------TTGVIRTAATLDHEVT---GVLLLSVQASSGS-P---PLYS 63 (281)
Q Consensus 1 ~~~~d~d--~~~~l~Y~i~~g~~~~~F~Id~--------~~G~i~~~~~LD~E~~---~~~~l~v~a~dg~-~---~~~~ 63 (281)
|+|+|.| .|+.+.|+|..++....|+|++ .+|.|+++++||||+. ..|.+.|.|.++. + ..++
T Consensus 14 v~AtD~D~g~n~~v~Ysi~~~~~~~~F~I~~~~~~f~v~~tG~i~~~~~LD~E~~~~~~~~~~~V~a~d~g~~~~~~~~~ 93 (419)
T 3ubh_A 14 IEFTEADGDTEGKSVFQLEKETDKETFKIRDDNPWVTVETNGAVRVKKKWDYEELGPEKTIDFWVIITNMGHNAGIKYTD 93 (419)
T ss_dssp EEEEGGGGCSTTCEEEECCCSSTTCEEEESSCCSSEEECTTSEEEESSCCCGGGSCTTCEEEEEEEEEC--CCSSSCCEE
T ss_pred EEEEcccCCCCceEEEEEecCCCCceEEEcCCCccEEECCCcEEEECCccCccccCccceEEEEEEEEeCCCCCCCCCcc
Confidence 4677777 6889999998877778999987 7999999999999998 6899999999643 2 4677
Q ss_pred EEEEEEEEEecCCCCCeeccCc--EEEEEeCCCCCCceEEEEEEEeCCCCCCceEEEEEeeCCCCCceeeEEeCceeEEE
Q psy11062 64 YAQVKVTIEDRNDNAPEFESTT--IRLSVPESAALGLPLYTVVARDKDSGDNGKIRYHLASGNFGDSRLFAVDQTSGHLS 141 (281)
Q Consensus 64 ~~~v~i~V~dvNd~~P~f~~~~--~~~~v~En~~~gt~v~~v~a~D~D~g~~~~i~y~l~~~~~~~~~~F~id~~tG~i~ 141 (281)
++.|+|.|.|+|||+|.|.... |.+.|+|++++|+.++++.|+|+|.|.| ++|+|..++ ....|.|++.+|.|+
T Consensus 94 ~~~v~I~V~DvNDn~P~F~~~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g~n--~~y~i~~~~--~~~~F~I~~~tG~i~ 169 (419)
T 3ubh_A 94 NQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDTDHN--IHYFIVRDR--TGGRFEVDERSGVVR 169 (419)
T ss_dssp EEEEEEEEECCCCSCCEECCSSSSCEEEECTTCCTTCEEEECCEECSSTTCC--EEEEEEEES--SSSCEEECTTTCEEE
T ss_pred eEEEEEEEEECCCCCCcccCCCCcEEEEEeCCCCCCCEEEEEEEECCCCCce--eEEEEEeCC--CCCeEEEeCCceEEE
Confidence 8999999999999999999876 7899999999999999999999999876 899998753 457899999999999
Q ss_pred EceecCccCcceEEEEEEEEECCCC----CCeEEEEEEEEEEeCCCCCCeeeCCceEEEEeCCCCCCcEEEEEEeeEEEe
Q psy11062 142 LSKHLDYETSQRHTIVVSATDQGDP----PMSSNLTVLLEVQDVNDNPPVFERSEYFVSVSEALPAKSQVRTTCTPLYVL 217 (281)
Q Consensus 142 ~~~~LD~E~~~~y~l~V~a~D~~~p----~~~~~~~v~I~V~DvND~~P~f~~~~y~~~v~E~~~~gt~v~~v~A~~yd~ 217 (281)
+.+.||+|....|.|+|+|+|++.+ ++++++.++|.|.| |||+|.|.+..|.+.|+|+.++|+.|++|.|. |.
T Consensus 170 ~~~~ld~e~~~~y~l~V~A~D~g~~~~~~~~~~t~~v~I~V~d-ndn~P~F~~~~y~~~v~En~~~gt~v~~v~A~--D~ 246 (419)
T 3ubh_A 170 TRGTDLFQLDMEYVLYVKAEDQNGKVDDRRFQSTPEERLSIVG-GKRAPQFYMPSYEAEIPENQKKDSDIISIKAK--SF 246 (419)
T ss_dssp ECSSSCCCBTCEEEEEEEEEEEEEEC--CCEEECCCEEEEEEE-SCCCCEESSSCEEEEEETTCCTTCEEEECCEE--CS
T ss_pred EecccccccccEEEEEEEEEECCCCccCcccccceEEEEEEEC-CCCCCceecCeeEEEecCCCCCCcEEEEEEEe--cC
Confidence 9999999999999999999998764 56788999999999 99999999999999999999999999999998 54
Q ss_pred ecCccccEEEEEe
Q psy11062 218 VEGQCSLVCWSTL 230 (281)
Q Consensus 218 d~g~~~~~~~~~~ 230 (281)
+++.++|++.
T Consensus 247 ---dn~~i~Ysi~ 256 (419)
T 3ubh_A 247 ---ADREIRYTLK 256 (419)
T ss_dssp ---SCCCCEEEEE
T ss_pred ---CCCceEEEEe
Confidence 3667777775
No 12
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=100.00 E-value=1e-39 Score=276.34 Aligned_cols=180 Identities=27% Similarity=0.437 Sum_probs=158.2
Q ss_pred EEecC-CCcEEEEEEeCCCCceEEEECCccEEEECcCCCceeccEEEEEEEEEeCC--CCceeEEEEEEEEEecCCCCCe
Q psy11062 4 LLLDQ-SNPIRYTIHSGDPEGYFTLDSTTGVIRTAATLDHEVTGVLLLSVQASSGS--PPLYSYAQVKVTIEDRNDNAPE 80 (281)
Q Consensus 4 ~d~d~-~~~l~Y~i~~g~~~~~F~Id~~~G~i~~~~~LD~E~~~~~~l~v~a~dg~--~~~~~~~~v~i~V~dvNd~~P~ 80 (281)
+|.|. ++.|+|+|.+++..++|+|++.+|.|+++++||||....|.|.|.|.|+. +++++++.|.|.|.|+|||+|.
T Consensus 27 ~D~D~gn~~i~Y~l~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~~~~~~~~~~~v~I~V~DvNDn~P~ 106 (215)
T 2a4e_A 27 SDIDSGDGNIKYILSGEGAGTIFVIDDKSGNIHATKTLDREERAQYTLMAQAVDRDTNRPLEPPSEFIVKVQDINDNPPE 106 (215)
T ss_dssp CTTCCSSSCEEEEEEETTBTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTTCCEEEEEEEEEEEEECCCCCCCE
T ss_pred ECCCCCCCeEEEEEECCCCCCeEEEECCceEEEECCccCCccCCEEEEEEEEEECCCCCcccccEEEEEEEeeCCCCCCC
Confidence 44554 47899999876555789999999999999999999999999999999764 4577889999999999999999
Q ss_pred eccCcEEEEEeCCCCCCceEEEEEEEeCCC---CCCceEEEEEeeCCCCCceeeEEeCceeEEEEc-eecCccCcceEEE
Q psy11062 81 FESTTIRLSVPESAALGLPLYTVVARDKDS---GDNGKIRYHLASGNFGDSRLFAVDQTSGHLSLS-KHLDYETSQRHTI 156 (281)
Q Consensus 81 f~~~~~~~~v~En~~~gt~v~~v~a~D~D~---g~~~~i~y~l~~~~~~~~~~F~id~~tG~i~~~-~~LD~E~~~~y~l 156 (281)
|....|.+.|+|+.++|+.|+++.|+|+|. |.|+.++|+|..+ ...|.|++.+|.|+++ ++||||....|.|
T Consensus 107 F~~~~y~~~v~E~~~~Gt~v~~v~A~D~D~~~~G~n~~i~Y~i~~~----~~~F~Id~~tG~I~~~~~~LD~E~~~~y~l 182 (215)
T 2a4e_A 107 FLHEIYHANVPERSNVGTSVIQVTASDADDPTYGNSAKLVYSILEG----QPYFSVEAQTGIIRTALPNMDREAKEEYHV 182 (215)
T ss_dssp ESSSSEEEEEETTCCTTCEEEECCEECSSCTTTCSSSCCEEEEEES----TTTEEECTTTCEEEECSSCCCSSSCSEEEE
T ss_pred ccCCceEEEEECCCCCCCEEEEEEEEECCCCCCCCceEEEEEEeCC----CCcEEEeCCccEEEEcccCCCcccCCEEEE
Confidence 999999999999999999999999999997 8899999999985 3589999999999999 9999999999999
Q ss_pred EEEEEECCCC--CCeEEEEEEEEEEeCCCCCCe
Q psy11062 157 VVSATDQGDP--PMSSNLTVLLEVQDVNDNPPV 187 (281)
Q Consensus 157 ~V~a~D~~~p--~~~~~~~v~I~V~DvND~~P~ 187 (281)
.|+|+|+|.| +++++++|+|+|.|+|||+|+
T Consensus 183 ~V~A~D~g~~~~~~s~~~~v~I~V~DvNDn~P~ 215 (215)
T 2a4e_A 183 VIQAKDMGGHMGGLSGTTKVTITLTDDYKDDDK 215 (215)
T ss_dssp EEEEETTTTCTTCCEEEEEEEEEEEC-------
T ss_pred EEEEEECCCCCCCceeEEEEEEEEEECCCCCCC
Confidence 9999999976 589999999999999999995
No 13
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=100.00 E-value=1.9e-39 Score=324.14 Aligned_cols=224 Identities=26% Similarity=0.354 Sum_probs=204.0
Q ss_pred CEEEEecCC-----CcEEEEEEeCCC----CceEEEECCccEEEEC-cCCCceeccEEEEEEEEEeC-CCCceeEEEEEE
Q psy11062 1 MKILLLDQS-----NPIRYTIHSGDP----EGYFTLDSTTGVIRTA-ATLDHEVTGVLLLSVQASSG-SPPLYSYAQVKV 69 (281)
Q Consensus 1 ~~~~d~d~~-----~~l~Y~i~~g~~----~~~F~Id~~~G~i~~~-~~LD~E~~~~~~l~v~a~dg-~~~~~~~~~v~i 69 (281)
++|+|.|.+ +.++|+|.++.+ .++|+|++.+|.|++. +.||||+...|.|.|.|+|+ .++++++++|+|
T Consensus 285 v~AtD~D~g~~~~N~~v~Ysi~~~~~~~~~~~~F~Id~~tG~I~~~~~~LDrE~~~~y~l~V~A~D~g~~~~s~~~~v~I 364 (880)
T 1q55_A 285 VSATDEDDNIDSLNGVLSYSILKQDPEEPIPNLFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGAGLSVEGKAII 364 (880)
T ss_dssp CCEECCSCCSSSSTTCCEEEEEEESSCCSCSCSEEECTTTCEEEECSCCCCTTTCCEEEEEEEEEHHHHTSCEEECCEEE
T ss_pred EEEEcCCCCCCCcCcEEEEEEcCCCCCcccCCeEEEccCCccEEEecccCCHHHcceeEEEEEEEECCCCCccceeEEEE
Confidence 467888764 789999998763 4799999999999995 79999999999999999964 457889999999
Q ss_pred EEEecCCCCCeeccCcEEEEEeCCCCCCceEEEEEEEeCC--CCCCceEEEEEeeCCCCCceeeEEe--C--ceeEEEEc
Q psy11062 70 TIEDRNDNAPEFESTTIRLSVPESAALGLPLYTVVARDKD--SGDNGKIRYHLASGNFGDSRLFAVD--Q--TSGHLSLS 143 (281)
Q Consensus 70 ~V~dvNd~~P~f~~~~~~~~v~En~~~gt~v~~v~a~D~D--~g~~~~i~y~l~~~~~~~~~~F~id--~--~tG~i~~~ 143 (281)
.|.|+|||+|.|....|.+.|+|| ++|+.|+++.|+|+| .|.|+.++|+|.. +..+.|.|+ + .+|.|++.
T Consensus 365 ~V~DvNDn~P~F~~~~y~~~V~En-~~gt~V~~v~A~D~D~~~g~n~~v~Ysi~~---~~~~~F~I~~d~~~~~G~i~~~ 440 (880)
T 1q55_A 365 QITDANDNAPIFDPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRV---NEGGFFNITTDPESNQGILTTA 440 (880)
T ss_dssp EEECCCCCCCCBSCSEEEEEEESS-SCCCEEEEECBCCCSCTTSTTSCEECCBSC---CTTSCEEEEECTTTCCEEEEES
T ss_pred EEEeccCCCCCccccceEEEeecC-CCCcEEEEEEEECCCCCCCCCceEEEEEec---CCCceEEEEecCCCceEEEecc
Confidence 999999999999999999999999 999999999999999 6789999999987 356789995 3 67999999
Q ss_pred eecCccCcceEEEEEEEEECCC---CCCeEEEEEEEEEEeCCCCCCeeeCCceEEEEeCCCCCCcEEEEEEeeEEEeecC
Q psy11062 144 KHLDYETSQRHTIVVSATDQGD---PPMSSNLTVLLEVQDVNDNPPVFERSEYFVSVSEALPAKSQVRTTCTPLYVLVEG 220 (281)
Q Consensus 144 ~~LD~E~~~~y~l~V~a~D~~~---p~~~~~~~v~I~V~DvND~~P~f~~~~y~~~v~E~~~~gt~v~~v~A~~yd~d~g 220 (281)
++||||....|.|+|+|+|++. |.++++++|+|.|.|+|| +|+|.+..|.+.|+|+.++|+.|++|.|+ |.|.|
T Consensus 441 ~~LD~E~~~~y~l~V~A~D~~~~~~~~~sst~tV~I~V~DvND-~P~f~~~~y~~~V~En~~~Gt~V~~v~A~--D~D~g 517 (880)
T 1q55_A 441 KGLDFELRKQYVLQITVENAEPFSVPLPTSTATVTVTVEDVNE-APFFVPAVSRVDVSEDLSRGEKIISLVAQ--DPDKQ 517 (880)
T ss_dssp SCCCCSSCCCEEEEECCEESSCCSSCCCCCCEEEEEEEECCCC-CCEESSCEECCCBCTTCCSSEEEEECCEE--CCCTT
T ss_pred cCCCcccCCcEEEEEEEEECCCCCCCCcceeEEEEEEEEeCCC-CCEEecCceEEEEeCCCCCCCEEEEEEEE--eCCCC
Confidence 9999999999999999999874 457899999999999999 99999999999999999999999999999 99999
Q ss_pred ccccEEEEEee
Q psy11062 221 QCSLVCWSTLR 231 (281)
Q Consensus 221 ~~~~~~~~~~~ 231 (281)
.++.++|++..
T Consensus 518 ~n~~v~Ysi~~ 528 (880)
T 1q55_A 518 QIQKLSYFIGN 528 (880)
T ss_dssp CCCCEEEEECC
T ss_pred CCCcEEEEECC
Confidence 99999998865
No 14
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=100.00 E-value=2.2e-38 Score=267.32 Aligned_cols=178 Identities=27% Similarity=0.506 Sum_probs=163.7
Q ss_pred CEEEEecCCCcEEEEEEeCCCCceEEEECCccEEEECcCCCceeccEEEEEEEEEeCCCCceeEEEEEEEEEecCCCCCe
Q psy11062 1 MKILLLDQSNPIRYTIHSGDPEGYFTLDSTTGVIRTAATLDHEVTGVLLLSVQASSGSPPLYSYAQVKVTIEDRNDNAPE 80 (281)
Q Consensus 1 ~~~~d~d~~~~l~Y~i~~g~~~~~F~Id~~~G~i~~~~~LD~E~~~~~~l~v~a~dg~~~~~~~~~v~i~V~dvNd~~P~ 80 (281)
++|+|.|. +.+.|+|.+++..++|.|++.+|.|+++++||||+...|.|.|.|.|+.. .+++.+.|.|.|+|||+|.
T Consensus 32 v~A~D~D~-~~~~y~i~~~~~~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~v~a~D~~~--~~~~~v~I~V~DvNDn~P~ 108 (210)
T 3mvs_A 32 LLARDMDN-DPLVFGVSGEEASRFFAVEPDTGVVWLRQPLDRETKSEFTVEFSVSDHQG--VITRKVNIQVGDVNDNAPT 108 (210)
T ss_dssp CCEECTTC-CCCEEEEESHHHHHHEEECTTTCEEEESSCCCTTTCCEEEEEEEEECSSC--EEEEEEEEEEECCCCCCCE
T ss_pred EEEEeCCC-CcEEEEEeCCCCCCcEEEeCCCCEEEECCccCCcccceEEEEEEEEeCCC--CEEEEEEEEEEeCCCCCCc
Confidence 45777774 67999998766668999999999999999999999999999999998753 4678999999999999999
Q ss_pred eccCcEEEEEeCCCCCCceEEEEEEEeCCCCCCceEEEEEeeCCCCCceeeEEeCceeEEEEceecCccCcceEEEEEEE
Q psy11062 81 FESTTIRLSVPESAALGLPLYTVVARDKDSGDNGKIRYHLASGNFGDSRLFAVDQTSGHLSLSKHLDYETSQRHTIVVSA 160 (281)
Q Consensus 81 f~~~~~~~~v~En~~~gt~v~~v~a~D~D~g~~~~i~y~l~~~~~~~~~~F~id~~tG~i~~~~~LD~E~~~~y~l~V~a 160 (281)
|....|.+.|+|+.++|+.++++.|+|+|.|.|+.++|+|..+ ...|.|++.+|.|++.++||||....|.|.|+|
T Consensus 109 f~~~~y~~~v~E~~~~gt~v~~v~A~D~D~g~n~~v~Y~i~~~----~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~a 184 (210)
T 3mvs_A 109 FHNQPYSVRIPENTPVGTPIFIVNATDPDLGAGGSVLYSFQPP----SPFFAIDSARGIVTVIQELDYEVTQAYQLTVNA 184 (210)
T ss_dssp ECSCSEEEEEETTCCTTCEEEECCEECCSSGGGGCEEEEESSC----CSSEEECTTTCEEEECSCCCTTTCSEEEEEEEE
T ss_pred CCCceEEEEEECCCCCCCEEEEEEEEeCCCCCCceEEEEEeCC----CCCEEEeCCcEEEEECCcCCCcccceEEEEEEE
Confidence 9999999999999999999999999999999999999999863 468999999999999999999999999999999
Q ss_pred EECC-CCCCeEEEEEEEEEEeCCCCC
Q psy11062 161 TDQG-DPPMSSNLTVLLEVQDVNDNP 185 (281)
Q Consensus 161 ~D~~-~p~~~~~~~v~I~V~DvND~~ 185 (281)
+|++ .|++++++.|+|.|.|+|||+
T Consensus 185 ~D~g~~~~~s~~~~v~I~V~DvND~~ 210 (210)
T 3mvs_A 185 TDQDKTRPLSTLANLAIIITDMQDMD 210 (210)
T ss_dssp EECCSSSCCEEEEEEEEEEECCCCCC
T ss_pred EECCCCCCCEEEEEEEEEEEccCCCC
Confidence 9998 468999999999999999985
No 15
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=100.00 E-value=7.7e-40 Score=282.55 Aligned_cols=185 Identities=19% Similarity=0.163 Sum_probs=162.6
Q ss_pred CEEEEecCCCcEEEEEE----------eCCCCceEEEECCccEEEECcCCCceeccEE------------EEEEEEEeCC
Q psy11062 1 MKILLLDQSNPIRYTIH----------SGDPEGYFTLDSTTGVIRTAATLDHEVTGVL------------LLSVQASSGS 58 (281)
Q Consensus 1 ~~~~d~d~~~~l~Y~i~----------~g~~~~~F~Id~~~G~i~~~~~LD~E~~~~~------------~l~v~a~dg~ 58 (281)
|+|+|.|.+..+.|+|. .+ ..++|+|++.+|.|+++++||||....| .|.|.|+|+.
T Consensus 25 v~A~D~D~g~~~~~~i~~~~~~~y~i~~~-~~~~F~Id~~tG~i~~~~~LDrE~~~~y~~~~~G~p~~~~~l~V~a~D~g 103 (246)
T 2x2u_A 25 VHALRDAPEEVPSFRLGQHLYGTYRTRLH-ENNWIRIQEDTGLLYLQRSLDHSSWEKLSVRNRGFPLLTVYLKVFLSPTS 103 (246)
T ss_dssp CCEECSSTTCCCCCEECSEEECGGGCEEE-ECCSEEECTTTCEEEESSCBCHHHHHHHHHTSTTSCCCEEEEEEECC---
T ss_pred EEEEcCCCCCcceEEEeeccccceeccCC-CCCEEEECCCcEEEEECCcCChhHhhhhccccCCCcccceEEEEEEEcCC
Confidence 46778887556666664 22 3478999999999999999999999999 9999999654
Q ss_pred -C--CceeEEEEEEEEEecCCCCCe----------eccCcEEEEEeCCCCCCceEEEEEEEeCCCCCCceEEEEEeeCCC
Q psy11062 59 -P--PLYSYAQVKVTIEDRNDNAPE----------FESTTIRLSVPESAALGLPLYTVVARDKDSGDNGKIRYHLASGNF 125 (281)
Q Consensus 59 -~--~~~~~~~v~i~V~dvNd~~P~----------f~~~~~~~~v~En~~~gt~v~~v~a~D~D~g~~~~i~y~l~~~~~ 125 (281)
+ ++++++.|.|.|.|+|||+|. |....|.+.|+||.++|+.++++.|+|+|.|.|+.++|+|..++
T Consensus 104 ~~~~~~~~~~~v~I~V~DvNDn~P~~~~~~~~~~~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~- 182 (246)
T 2x2u_A 104 LREGECQWPGCARVYFSFFNTSFPACSSLKPRELCFPETRPSFRIRENRPPGTFHQFRLLPVQFLCPQISVAYRLLEGE- 182 (246)
T ss_dssp ----CCCTTTEEEEEEEEESSCCCCGGGCCHHHHHSCSSCCCEEEEBTSCCCEEEECSCHHHHHHCTTSCEEEEEESCT-
T ss_pred CCCCcccceEEEEEEEEECCCCCCccccccccccccCCCcEEEEEECCCCCCcEEEEEEEEcCCCCCCcEEEEEEccCC-
Confidence 3 467888999999999999999 99999999999999999999999999999999999999999853
Q ss_pred CCceeeEEeCceeEEEEceecCccCcceEEEEEEEEE-CCCCCCeEEEEEEEEEEeCCCCCCeee
Q psy11062 126 GDSRLFAVDQTSGHLSLSKHLDYETSQRHTIVVSATD-QGDPPMSSNLTVLLEVQDVNDNPPVFE 189 (281)
Q Consensus 126 ~~~~~F~id~~tG~i~~~~~LD~E~~~~y~l~V~a~D-~~~p~~~~~~~v~I~V~DvND~~P~f~ 189 (281)
...|.|++.+|.|++.++||||....|.|.|+|+| .|.|+++++++|+|+|.|+|||+|.|.
T Consensus 183 --~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~d~dg~p~~ss~~~v~I~V~DvNDn~P~F~ 245 (246)
T 2x2u_A 183 --GLPFRSAPDSLEVSTRWALDREQREKYELVAVCTVHAGAREEVVMVPFPVTVYDEDDSAPEFE 245 (246)
T ss_dssp --TSSEECCTTCCEEEESSCBCTTTCSEEEEEEEEEEC---CCEEEEEEEEEEEECSSCCSCCCC
T ss_pred --CCCEEEECCcCEEEeCCccCccccceEEEEEEEEecCCCCcceEEEEEEEEEEEeCCCCCccC
Confidence 67899999999999999999999999999999998 566889999999999999999999995
No 16
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=100.00 E-value=1.9e-37 Score=262.27 Aligned_cols=176 Identities=28% Similarity=0.428 Sum_probs=161.2
Q ss_pred EecCCCcEEEEEEeC----CCCceEEEECCccEEEECcCCCceeccEEEEEEEEEe-CCCCceeEEEEEEEEEecCCCCC
Q psy11062 5 LLDQSNPIRYTIHSG----DPEGYFTLDSTTGVIRTAATLDHEVTGVLLLSVQASS-GSPPLYSYAQVKVTIEDRNDNAP 79 (281)
Q Consensus 5 d~d~~~~l~Y~i~~g----~~~~~F~Id~~~G~i~~~~~LD~E~~~~~~l~v~a~d-g~~~~~~~~~v~i~V~dvNd~~P 79 (281)
|.|.++.++|+|.++ ++.++|.|++.+|.|++.++||||....|.|.|.|.| |.++.++++.|.|.|.|+|||+|
T Consensus 27 D~d~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~~~~~~~~~~v~I~V~DvNDn~P 106 (213)
T 3qrb_A 27 NRDKETKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRP 106 (213)
T ss_dssp GGGGTSCEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTSCBCSCCEEEEEEEECCSCCCC
T ss_pred CCCCCceEEEEEEcCCCCCCCCCeEEEECCCCEEEECCccCcccCceEEEEEEEEeCCCCcccceEEEEEEEEEccCCCC
Confidence 677889999999873 4456999999999999999999999999999999996 45567788999999999999999
Q ss_pred eeccCcEEEEEeCCCCCCceEEEEEEEeCCCC---CCceEEEEEeeCCCC--CceeeEEeCceeEEEEc-eecCccCcce
Q psy11062 80 EFESTTIRLSVPESAALGLPLYTVVARDKDSG---DNGKIRYHLASGNFG--DSRLFAVDQTSGHLSLS-KHLDYETSQR 153 (281)
Q Consensus 80 ~f~~~~~~~~v~En~~~gt~v~~v~a~D~D~g---~~~~i~y~l~~~~~~--~~~~F~id~~tG~i~~~-~~LD~E~~~~ 153 (281)
.|....|.+.|+|+.++|+.++++.|+|+|.| .|+.++|+|..+++. ....|.|++.+|.|++. ++||||....
T Consensus 107 ~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~~~~~~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~ 186 (213)
T 3qrb_A 107 EFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTSGLDRESYPT 186 (213)
T ss_dssp EESCSEEEEEEETTCCTTCEEEECCEECCSCTTTSSTTCCEEEEEEEESCCSCSCSEEECTTTCEEEECSSCCCTTTCCE
T ss_pred ccCCCceEEEEECCCCCCcEEEEEEEEeCCCCCCCcCcEEEEEEccCCCCCCcCCeEEEECCCcEEEEccCCCCCccCce
Confidence 99999999999999999999999999999998 899999999875422 45789999999999997 7999999999
Q ss_pred EEEEEEEEECCCCCCeEEEEEEEEEEe
Q psy11062 154 HTIVVSATDQGDPPMSSNLTVLLEVQD 180 (281)
Q Consensus 154 y~l~V~a~D~~~p~~~~~~~v~I~V~D 180 (281)
|.|.|+|+|+|.|+++++++|+|+|.|
T Consensus 187 y~l~V~A~D~g~~~~s~t~~v~I~V~D 213 (213)
T 3qrb_A 187 YTLVVQAADLQGEGLSTTAKAVITVKD 213 (213)
T ss_dssp EEEEEEEETGGGTSCEEEEEEEEEEEC
T ss_pred EEEEEEEEeCCCCCceEEEEEEEEEEC
Confidence 999999999999999999999999987
No 17
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=100.00 E-value=1.3e-35 Score=249.02 Aligned_cols=171 Identities=29% Similarity=0.394 Sum_probs=157.4
Q ss_pred EEecCCCcEEEEEEeCCCCceEEEECCccEEEECcCCCceeccEEEEEEEEEeCCC--CceeEEEEEEEEEecCCCCCee
Q psy11062 4 LLLDQSNPIRYTIHSGDPEGYFTLDSTTGVIRTAATLDHEVTGVLLLSVQASSGSP--PLYSYAQVKVTIEDRNDNAPEF 81 (281)
Q Consensus 4 ~d~d~~~~l~Y~i~~g~~~~~F~Id~~~G~i~~~~~LD~E~~~~~~l~v~a~dg~~--~~~~~~~v~i~V~dvNd~~P~f 81 (281)
.|.|.+.. +|+|.+++..++|+|++.+|.|+++++||||....|.|.|.|.|+.. ++++++.|.|.|.|+|||+|.|
T Consensus 26 ~D~D~g~~-~Y~i~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~g~~~~~~~~~~v~I~V~DvNDn~P~F 104 (203)
T 3ppe_A 26 SSVGNKNA-MYIIEGESANTIFKVQGYDGDIYAFERLDREKKAEYELTAHIIDRRNNRSLEPPSKFIIKVSDINDNAPIF 104 (203)
T ss_dssp BCCCCTTE-EEEEEETTBTTTEEEETTTTEEEESSCCCTTTCCEEEEEEEEEETTTTEECSCCEEEEEEEECCCCCCCEE
T ss_pred ecCCCCCc-EEEEecCCCCCeEEEECCcCEEEECccccccccceEEEEEEEEECCCCCcccceEEEEEEEcCCCCCCCCc
Confidence 45666556 99999888778999999999999999999999999999999997653 4678899999999999999999
Q ss_pred ccCcEEEEEeCCCCCCceEEEEEEEeCC---CCCCceEEEEEeeCCCCCceeeEEeCceeEEEEc-eecCccCcceEEEE
Q psy11062 82 ESTTIRLSVPESAALGLPLYTVVARDKD---SGDNGKIRYHLASGNFGDSRLFAVDQTSGHLSLS-KHLDYETSQRHTIV 157 (281)
Q Consensus 82 ~~~~~~~~v~En~~~gt~v~~v~a~D~D---~g~~~~i~y~l~~~~~~~~~~F~id~~tG~i~~~-~~LD~E~~~~y~l~ 157 (281)
....|.+.|+|+.++|+.++++.|+|+| .|.|+.++|+|..++ ..|.|+ .+|.|++. ++||||....|.|.
T Consensus 105 ~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~i~~~~----~~F~I~-~tG~i~~~~~~LD~E~~~~y~l~ 179 (203)
T 3ppe_A 105 VQKIFNGSVPEMSRLGTSVTKVTAEDADDPTVAGHATVTYQIIKGN----EYFTVD-DSGVIFTARADLDRESQSAYEII 179 (203)
T ss_dssp SCSEEEEEEETTCCTTCEEEECCEECCSCTTSSSTTCEEEEEEEST----TTEEEC-TTSEEEESCSCCCTTTCSEEEEE
T ss_pred cCCccEEEEeccCCCCcEEEEEEEEcCCCcCCCCceEEEEEEeCCC----CcEEEe-CCeEEEECCcCCCcccCCEEEEE
Confidence 9999999999999999999999999999 578999999999853 489999 99999999 99999999999999
Q ss_pred EEEEEC-CCCCCeEEEEEEEEEEe
Q psy11062 158 VSATDQ-GDPPMSSNLTVLLEVQD 180 (281)
Q Consensus 158 V~a~D~-~~p~~~~~~~v~I~V~D 180 (281)
|+|+|+ |.|+++++++|+|+|.|
T Consensus 180 V~A~D~~G~p~~s~t~~v~I~V~D 203 (203)
T 3ppe_A 180 VKAKDALGLTGESSTATVIIRLTD 203 (203)
T ss_dssp EEEEETTCCCCSSSEEEEEEEEEC
T ss_pred EEEEeCCCCCCCeEEEEEEEEEEC
Confidence 999998 77889999999999987
No 18
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=100.00 E-value=2.7e-36 Score=255.34 Aligned_cols=176 Identities=27% Similarity=0.416 Sum_probs=159.6
Q ss_pred EecCCCcEEEEEEeCC----CCceEEEECCccEEEECcCCCceeccEEEEEEEEEeC-CCCceeEEEEEEEEEecCCCCC
Q psy11062 5 LLDQSNPIRYTIHSGD----PEGYFTLDSTTGVIRTAATLDHEVTGVLLLSVQASSG-SPPLYSYAQVKVTIEDRNDNAP 79 (281)
Q Consensus 5 d~d~~~~l~Y~i~~g~----~~~~F~Id~~~G~i~~~~~LD~E~~~~~~l~v~a~dg-~~~~~~~~~v~i~V~dvNd~~P 79 (281)
|.|.|+.|+|+|.++. +.++|+|++.+|.|+++++||||....|.|.|.|.|+ .+++++++.|.|.|.|+|||+|
T Consensus 27 D~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~g~~~~~~~~~v~I~V~DvNDn~P 106 (215)
T 2qvi_A 27 DRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAVDINGNQVENPIDIVINVIDMNDNRP 106 (215)
T ss_dssp GGGGTSCEEEEEESTTSSSTTCSSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTTCCCEEEEEEEEEEECCCCCCC
T ss_pred CCCCCceEEEEEECCCCCCCCCCcEEEeCCccEEEECcccCcccCCeEEEEEEEEECCCCceeeeEEEEEEEeECCCCCC
Confidence 4456789999998653 3579999999999999999999999999999999964 5567889999999999999999
Q ss_pred eeccCcEEEEEeCCCCCCceEEEEEEEeCCC--CCCceEEEEEeeCCCC--CceeeEEeCceeEEEEc-eecCccCcceE
Q psy11062 80 EFESTTIRLSVPESAALGLPLYTVVARDKDS--GDNGKIRYHLASGNFG--DSRLFAVDQTSGHLSLS-KHLDYETSQRH 154 (281)
Q Consensus 80 ~f~~~~~~~~v~En~~~gt~v~~v~a~D~D~--g~~~~i~y~l~~~~~~--~~~~F~id~~tG~i~~~-~~LD~E~~~~y 154 (281)
.|....|.+.|+|+.++|+.++++.|+|+|. |.|+.++|+|..+++. ....|.|++.+|.|++. ++||||....|
T Consensus 107 ~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y 186 (215)
T 2qvi_A 107 EFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRILSQAPSTPSPNMFTINNETGDIITVAAGLDREKVQQY 186 (215)
T ss_dssp BCSSSEEEEEECSSCCTTCEEEECCCBCSSCTTSTTTCCCCEEEECSSCCSSTTCEEECTTTCEEEECSCCCCTTTCSEE
T ss_pred cccCceeEEEEeCCCCCCCEEEEEEEEeCCCCCCCCcEEEEEEecCCCCCCcCCeEEEcCCCcEEEEecCCCCcccCCeE
Confidence 9999999999999999999999999999998 7899999999986421 46789999999999995 79999999999
Q ss_pred EEEEEEEECCCC---CCeEEEEEEEEEEe
Q psy11062 155 TIVVSATDQGDP---PMSSNLTVLLEVQD 180 (281)
Q Consensus 155 ~l~V~a~D~~~p---~~~~~~~v~I~V~D 180 (281)
.|.|+|+|++.| +++++++|+|+|+|
T Consensus 187 ~l~V~a~D~g~~p~~~ls~t~~v~I~V~D 215 (215)
T 2qvi_A 187 TLIIQATDMEGNPTYGLSNTATAVITVTD 215 (215)
T ss_dssp EEEEECCTTTTCTTTSCCCEEEEEEEECC
T ss_pred EEEEEEEECCCCCCCCcceEEEEEEEEEC
Confidence 999999999887 78999999999987
No 19
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=100.00 E-value=1.1e-35 Score=252.20 Aligned_cols=179 Identities=25% Similarity=0.405 Sum_probs=160.5
Q ss_pred EEEEecCCCcEEEEEEe----CCCCceEEEECCccEEEECcCCCceeccEEEEEEEEEeC-CCCceeEEEEEEEEEecCC
Q psy11062 2 KILLLDQSNPIRYTIHS----GDPEGYFTLDSTTGVIRTAATLDHEVTGVLLLSVQASSG-SPPLYSYAQVKVTIEDRND 76 (281)
Q Consensus 2 ~~~d~d~~~~l~Y~i~~----g~~~~~F~Id~~~G~i~~~~~LD~E~~~~~~l~v~a~dg-~~~~~~~~~v~i~V~dvNd 76 (281)
++.++|.+..++|+|.+ +++.++|.|++.+|.|+++++||||+...|.|.|.|+|+ .+++++++.|.|.|.|+||
T Consensus 24 ~v~a~D~d~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~g~~~~~~~~~v~I~V~DvND 103 (218)
T 3k5r_A 24 KVVDSDRPEGSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDRETIATYQLYVETTDASGKTLEGPVPLEVIVIDQND 103 (218)
T ss_dssp ECBCTTCCTTCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEECSSSCEEEEEEEEEEEEECTTC
T ss_pred EEEecCCCceEEEEEEcCCCCCCCCCeEEEeCCceEEEECCcCCcccCCEEEEEEEEEECCCCceeeeEEEEEEEEeCCC
Confidence 35566777799999975 345589999999999999999999999999999999964 4567889999999999999
Q ss_pred CCCeeccCcEEEEEeCCCCCCceEEEEEEEeCCC--CCCceEEEEEeeCCCC--CceeeEEeCceeEEEEc---eecCcc
Q psy11062 77 NAPEFESTTIRLSVPESAALGLPLYTVVARDKDS--GDNGKIRYHLASGNFG--DSRLFAVDQTSGHLSLS---KHLDYE 149 (281)
Q Consensus 77 ~~P~f~~~~~~~~v~En~~~gt~v~~v~a~D~D~--g~~~~i~y~l~~~~~~--~~~~F~id~~tG~i~~~---~~LD~E 149 (281)
|+|.|....|.+.|+|+.++|+.++++.|+|+|. |.|+.++|+|..++.. ....|.||+.+|.|++. ++||||
T Consensus 104 n~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~~~~LD~E 183 (218)
T 3k5r_A 104 NRPIFREGPYIGHVMEGSPTGTTVMRMTAFDADDPATDNALLRYNIRQQTPDKPSPNMFYIDPEKGDIVTVVSPALLDRE 183 (218)
T ss_dssp CCCCCCSCSEEEEEETTCCTTCEEEECCCSCSSSSCGGGGCEEEEEEEEESCCSCSCSEEECTTTCEEEECSCGGGCCGG
T ss_pred CCCcccCCceEEEEECCCCCCCEEEEEEEEeCCCCCCCCcEEEEEEecCCCCCCcCCEEEEECCccEEEEeccCCCCCcc
Confidence 9999999999999999999999999999999998 7899999999975421 13679999999999987 699999
Q ss_pred C--cceEEEEEEEEECC--CCCCeEEEEEEEEEEe
Q psy11062 150 T--SQRHTIVVSATDQG--DPPMSSNLTVLLEVQD 180 (281)
Q Consensus 150 ~--~~~y~l~V~a~D~~--~p~~~~~~~v~I~V~D 180 (281)
. ...|.|.|+|+|+| .|+++++++|+|+|.|
T Consensus 184 ~~~~~~y~l~V~a~D~gg~~p~~sst~~v~I~V~D 218 (218)
T 3k5r_A 184 TLENPKYELIIEAQDMAGLDVGLTGTATATIVIDD 218 (218)
T ss_dssp GCSCSEEEEEEEEEECSSTTTTCEEEEEEEEEEEC
T ss_pred ccCCCeEEEEEEEEECCCCCCCeeEEEEEEEEEEC
Confidence 9 67999999999999 8889999999999987
No 20
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=100.00 E-value=3.1e-36 Score=253.66 Aligned_cols=174 Identities=27% Similarity=0.449 Sum_probs=152.4
Q ss_pred EEEecC-CCcEEEEEEeCCCCceEEEECCccEEEECcCCCceeccEEEEEEEEEeC--CCCceeEEEEEEEEEecCCCCC
Q psy11062 3 ILLLDQ-SNPIRYTIHSGDPEGYFTLDSTTGVIRTAATLDHEVTGVLLLSVQASSG--SPPLYSYAQVKVTIEDRNDNAP 79 (281)
Q Consensus 3 ~~d~d~-~~~l~Y~i~~g~~~~~F~Id~~~G~i~~~~~LD~E~~~~~~l~v~a~dg--~~~~~~~~~v~i~V~dvNd~~P 79 (281)
|+|.|. ++.|.|+|.+++..++|+|++.+|.|++.++||||+...|.|.|.|.|+ .+++++++.+.|.|.|+|||+|
T Consensus 25 a~D~D~g~~~i~Y~l~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~~~~~~~~~~~v~I~V~DvNDn~P 104 (207)
T 3lnd_A 25 HSDQDRGDGSLKYILSGDGAGDLFIINENTGDIQATKRLDREEKPVYILRAQAVNRRTGRPVEPESEFIIKIHDINDNEP 104 (207)
T ss_dssp CCTTCCSSTTBCCCCCSSSBTTTEEECTTTCEEEECSCCCGGGCCEEEC----CBSSSCCCCSCCCCCEEEEECCSCCCC
T ss_pred EeCCCCCCceEEEEEECCCCCCeEEEECCceEEEECCCcCcccCCEEEEEEEEEECCCCCccccEEEEEEEECccCCCCC
Confidence 345553 5679999986666579999999999999999999999999999999975 3567788899999999999999
Q ss_pred eeccCcEEEEEeCCCCCCceEEEEEEEeCCC---CCCceEEEEEeeCCCCCceeeEEeCceeEEEEc-eecCccCcceEE
Q psy11062 80 EFESTTIRLSVPESAALGLPLYTVVARDKDS---GDNGKIRYHLASGNFGDSRLFAVDQTSGHLSLS-KHLDYETSQRHT 155 (281)
Q Consensus 80 ~f~~~~~~~~v~En~~~gt~v~~v~a~D~D~---g~~~~i~y~l~~~~~~~~~~F~id~~tG~i~~~-~~LD~E~~~~y~ 155 (281)
.|....|.+.|+|+.++|+.++++.|+|+|. |.|+.++|+|..+ ...|.|++.+|.|++. ++||||....|.
T Consensus 105 ~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~i~~~----~~~F~Id~~tG~i~~~~~~lD~E~~~~y~ 180 (207)
T 3lnd_A 105 IFTKDVYTATVPEMADVGTFVVQVTATDADDPTYGNSAKVVYSILQG----QPYFSVESETGIIKTALLNMDRENREQYQ 180 (207)
T ss_dssp EESCSEEEEEEESSCCTTCEEEECCEECSSCTTSSSTTCCEEEEEES----GGGEEECTTTCEEEECCSSCCC--CCEEE
T ss_pred ccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCCCcEEEEEEcCC----CCCEEEcCCCcEEEECcccCCcccCCEEE
Confidence 9999999999999999999999999999998 8899999999984 4589999999999999 999999999999
Q ss_pred EEEEEEECCCC--CCeEEEEEEEEEEe
Q psy11062 156 IVVSATDQGDP--PMSSNLTVLLEVQD 180 (281)
Q Consensus 156 l~V~a~D~~~p--~~~~~~~v~I~V~D 180 (281)
|.|+|+|+|.| +++++++|+|+|.|
T Consensus 181 l~V~A~D~g~~~~~~s~t~~v~I~V~D 207 (207)
T 3lnd_A 181 VVIQAKDMGGQMGGLSGTTTVNITLTD 207 (207)
T ss_dssp EEEEEESGGGCTTCBEEEEEEEEEEEC
T ss_pred EEEEEEECCCCCCCcEeEEEEEEEEeC
Confidence 99999999876 78999999999987
No 21
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=100.00 E-value=6.1e-34 Score=254.40 Aligned_cols=178 Identities=26% Similarity=0.413 Sum_probs=156.5
Q ss_pred CEEEEecCCCcEEEEEEeCCCCceEEEECCccEEEECcCCCceeccEEEEEEEEEeCC-----CCceeEEEEEEEEEecC
Q psy11062 1 MKILLLDQSNPIRYTIHSGDPEGYFTLDSTTGVIRTAATLDHEVTGVLLLSVQASSGS-----PPLYSYAQVKVTIEDRN 75 (281)
Q Consensus 1 ~~~~d~d~~~~l~Y~i~~g~~~~~F~Id~~~G~i~~~~~LD~E~~~~~~l~v~a~dg~-----~~~~~~~~v~i~V~dvN 75 (281)
++|+|.|.+..+.|+|..++..++|.|++.+|.|+++++||||....|.|.|.|+|+. +++++++.++|.|.| |
T Consensus 130 v~A~D~D~g~ni~Y~i~~~~~~~~F~Id~~tG~i~~~~~lD~e~~~~y~l~V~A~D~g~~~~~~~~~~~~~v~I~V~d-n 208 (316)
T 3ubf_A 130 LQARDPDTDHNIHYFIVRDRTGGRFEVDERSGVVRTRGTDLFQLDMEYVLYVKAEDQNGKVDDRRFQSTPEERLSIVG-G 208 (316)
T ss_dssp CCEECSSTTCCEEEEEEEEESSSCEEECTTTCEEEECSSCCCCTTCEEEEEEEEEESCC-------CBCCCEEEEEEE-S
T ss_pred EEEECCCCCCceEEEEEeCCCCCEEEEECCccEEEECCcCCcccCcEEEEEEEEEeCCCCCCCccccceEEEEEEEEc-C
Confidence 5688888888899999988778899999999999999999999999999999999764 346788899999999 9
Q ss_pred CCCCeeccCcEEEEEeCCCCCCceEEEEEEEeCCCCCCceEEEEEe-eCCCCCceeeEEeCceeEEEEceecCccCc---
Q psy11062 76 DNAPEFESTTIRLSVPESAALGLPLYTVVARDKDSGDNGKIRYHLA-SGNFGDSRLFAVDQTSGHLSLSKHLDYETS--- 151 (281)
Q Consensus 76 d~~P~f~~~~~~~~v~En~~~gt~v~~v~a~D~D~g~~~~i~y~l~-~~~~~~~~~F~id~~tG~i~~~~~LD~E~~--- 151 (281)
||+|.|....|.+.|+||.++|+.++++.|+|+| ++.++|+|. .+ ....+|.|++.+|.|++.++||||..
T Consensus 209 Dn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D---n~~i~Y~i~~~~--~~~~~F~Id~~tG~i~~~~~LD~E~~~~~ 283 (316)
T 3ubf_A 209 KRAPQFYMPSYEAEIPENQKKDSDIISIKAKSFA---DREIRYTLKAQG--QGAGTFNIGPTSGIVKLAKELDFEDLRQP 283 (316)
T ss_dssp CCCCEESSSSEEEEEETTCCTTCEEEECCEECTT---CCCEEEEEEEES--SCTTTEEECTTTCEEEECSCCCSSCTTSC
T ss_pred CCCCEEcCCCceEEEeCCCCCCCEEEEEEEEeCC---CCEEEEEEEcCC--CCCCeEEEECCeEEEEECCcCCccccCCC
Confidence 9999999999999999999999999999999998 678999998 44 35788999999999999999999997
Q ss_pred ceEEEEEEEEECCCCCCeEEEEEEEEEEeCCCCC
Q psy11062 152 QRHTIVVSATDQGDPPMSSNLTVLLEVQDVNDNP 185 (281)
Q Consensus 152 ~~y~l~V~a~D~~~p~~~~~~~v~I~V~DvND~~ 185 (281)
..|.|.|+|+|.++ ++++++.|+|+|+|+||||
T Consensus 284 ~~y~l~V~A~dd~g-~~~~~~~v~I~V~DvNDn~ 316 (316)
T 3ubf_A 284 HVYSLIVTATEDSG-GFSTSVDLTIRVTDVNDNA 316 (316)
T ss_dssp SEEEEEEEEEESSS-SCEEEEEEEEEEECC----
T ss_pred ceEEEEEEEEECCC-CCEEEEEEEEEEEecCCCC
Confidence 79999999995333 4899999999999999986
No 22
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=100.00 E-value=8.5e-33 Score=247.38 Aligned_cols=175 Identities=31% Similarity=0.506 Sum_probs=153.9
Q ss_pred CEEEEecC-----CCcEEEEEEeCCCCceEEEECCccEEEEC-cCCCceeccEEEEEEEEEeCC-C--CceeEEEEEEEE
Q psy11062 1 MKILLLDQ-----SNPIRYTIHSGDPEGYFTLDSTTGVIRTA-ATLDHEVTGVLLLSVQASSGS-P--PLYSYAQVKVTI 71 (281)
Q Consensus 1 ~~~~d~d~-----~~~l~Y~i~~g~~~~~F~Id~~~G~i~~~-~~LD~E~~~~~~l~v~a~dg~-~--~~~~~~~v~i~V 71 (281)
++|+|.|. |+.++|+|.+++ .+|.|++.+|.|+++ +.||||....|.|.|.|+|+. | ++++++.|+|.|
T Consensus 128 v~A~D~D~~~~G~n~~i~Y~i~~~~--~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~a~D~g~p~~~~s~~~~v~I~V 205 (322)
T 2a62_A 128 VTATDADDPVYGNSAKLVYSILEGQ--PYFSIEPETAIIKTALPNMDREAKEEYLVVIQAKDMGGHSGGLSGTTTLTVTL 205 (322)
T ss_dssp CCCCBCSCSSSTTSSCEEEEEEECT--TTEEECTTTCCEEECSSCCCGGGCSEEEEEEEEEESCSSSSCCBCCEEEEEEE
T ss_pred EEEEeCCCCCCCccEEEEEEEccCC--CCEEEecCCCEEEecccCCCcccCCeEEEEEEEEECCCCCCCceeEEEEEEEE
Confidence 35667663 578999999865 579999999999998 899999999999999999754 3 378899999999
Q ss_pred EecCCCCCeeccCcEEEEEeCCCCCCceEEEEEEEeCCCCCCceEEEEEeeCCCCCceeeEEe----CceeEEEEceecC
Q psy11062 72 EDRNDNAPEFESTTIRLSVPESAALGLPLYTVVARDKDSGDNGKIRYHLASGNFGDSRLFAVD----QTSGHLSLSKHLD 147 (281)
Q Consensus 72 ~dvNd~~P~f~~~~~~~~v~En~~~gt~v~~v~a~D~D~g~~~~i~y~l~~~~~~~~~~F~id----~~tG~i~~~~~LD 147 (281)
.|+|||+|.|.+..|.+.|+|+.++|+.++++.|+|+|.|.|+.++|+|..++ ....|.|+ +.+|.|++.++||
T Consensus 206 ~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~g~n~~i~Y~i~~g~--~~~~F~I~~d~~~~tG~i~~~~~LD 283 (322)
T 2a62_A 206 TDVNDNPPKFAQSLYHFSVPEDVVLGTAIGRVKANDQDIGENAQSSYDIIDGD--GTALFEITSDAQAQDGVIRLRKPLD 283 (322)
T ss_dssp CCCCCCCCCCSCSEEEEEECSCCSSCCEEEEEECCCSSCGGGTCCEEEEC-----CCSSBCCBCCTTTSEEEEEBCSCCC
T ss_pred EecCCCCCeecCCCceeEeECCCCCCcEEEEEEEEeCCCCCCceEEEEEECCC--CCCcEEEeccCCCceEEEEECCcCC
Confidence 99999999999999999999999999999999999999999999999998764 46789998 4689999999999
Q ss_pred ccCcceEEEEEEEEECCCCC-------CeEEEEEEEEEE
Q psy11062 148 YETSQRHTIVVSATDQGDPP-------MSSNLTVLLEVQ 179 (281)
Q Consensus 148 ~E~~~~y~l~V~a~D~~~p~-------~~~~~~v~I~V~ 179 (281)
||....|.|.|+|+|.|.|+ ++++++|+|.|.
T Consensus 284 ~E~~~~y~l~V~A~D~g~pp~~~~~~~~s~~~~V~I~V~ 322 (322)
T 2a62_A 284 FETKKSYTLKVEAANIHIDPRFSSRGPFKDTATVKIVVE 322 (322)
T ss_dssp CSSCCEEEEEEEEECCCSSCTTSSCCCCCCCCEEEEEEC
T ss_pred cccCCeEEEEEEEEECCCCCccccCCCcccEEEEEEEEC
Confidence 99999999999999998775 457888888773
No 23
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=99.97 E-value=3.1e-31 Score=223.58 Aligned_cols=183 Identities=22% Similarity=0.273 Sum_probs=152.2
Q ss_pred CCCCeeccCcEE--EEEeCCCCCCceEEEEEEEeCCCCCCceEEEEEeeCCCCCceeeEEeCceeEEEEceecCccCcce
Q psy11062 76 DNAPEFESTTIR--LSVPESAALGLPLYTVVARDKDSGDNGKIRYHLASGNFGDSRLFAVDQTSGHLSLSKHLDYETSQR 153 (281)
Q Consensus 76 d~~P~f~~~~~~--~~v~En~~~gt~v~~v~a~D~D~g~~~~i~y~l~~~~~~~~~~F~id~~tG~i~~~~~LD~E~~~~ 153 (281)
|++|.|....|. +.|+|++++|+.++++.|+|+|. +.++|+|.++ +...+|.|++.+|.|++.++||||....
T Consensus 3 n~~P~F~~~~y~~~~~V~E~~~~Gt~v~~v~A~D~D~---~~~~y~i~~~--~~~~~F~Id~~tG~i~~~~~LD~E~~~~ 77 (210)
T 3mvs_A 3 NRLPFFTNHFFDTYLLISEDTPVGSSVTQLLARDMDN---DPLVFGVSGE--EASRFFAVEPDTGVVWLRQPLDRETKSE 77 (210)
T ss_dssp CCCCEECCGGGTSCEEEETTCCTTCEEEECCEECTTC---CCCEEEEESH--HHHHHEEECTTTCEEEESSCCCTTTCCE
T ss_pred CCCCccCCCccceEEEEeCCCCCCCEEEEEEEEeCCC---CcEEEEEeCC--CCCCcEEEeCCCCEEEECCccCCcccce
Confidence 459999999886 69999999999999999999994 4689999874 2457899999999999999999999999
Q ss_pred EEEEEEEEECCCCCCeEEEEEEEEEEeCCCCCCeeeCCceEEEEeCCCCCCcEEEEEEeeEEEeecCccccEEEEEeecC
Q psy11062 154 HTIVVSATDQGDPPMSSNLTVLLEVQDVNDNPPVFERSEYFVSVSEALPAKSQVRTTCTPLYVLVEGQCSLVCWSTLRLM 233 (281)
Q Consensus 154 y~l~V~a~D~~~p~~~~~~~v~I~V~DvND~~P~f~~~~y~~~v~E~~~~gt~v~~v~A~~yd~d~g~~~~~~~~~~~~~ 233 (281)
|.|.|.|+|++. .+++.|+|.|.|+|||+|.|.+..|.+.|+|+.++|+.|+++.|+ |.|.|.++.+.|++....
T Consensus 78 y~l~v~a~D~~~---~~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~gt~v~~v~A~--D~D~g~n~~v~Y~i~~~~ 152 (210)
T 3mvs_A 78 FTVEFSVSDHQG---VITRKVNIQVGDVNDNAPTFHNQPYSVRIPENTPVGTPIFIVNAT--DPDLGAGGSVLYSFQPPS 152 (210)
T ss_dssp EEEEEEEECSSC---EEEEEEEEEEECCCCCCCEECSCSEEEEEETTCCTTCEEEECCEE--CCSSGGGGCEEEEESSCC
T ss_pred EEEEEEEEeCCC---CEEEEEEEEEEeCCCCCCcCCCceEEEEEECCCCCCCEEEEEEEE--eCCCCCCceEEEEEeCCC
Confidence 999999999876 467899999999999999999999999999999999999999999 999999999999997766
Q ss_pred Chhhhh-ccCCCCCCCCcceEEEEEEEEEEecCcce
Q psy11062 234 THSTLK-SELNSPLGSNSFQLSILWYSIFLRTNTMQ 268 (281)
Q Consensus 234 ~~~~l~-~~~~~~~~~~~~~~~~~~y~~~~~~~~~~ 268 (281)
..+.++ ..|.-.+....-.-....|+|.|+..++.
T Consensus 153 ~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~a~D~g 188 (210)
T 3mvs_A 153 PFFAIDSARGIVTVIQELDYEVTQAYQLTVNATDQD 188 (210)
T ss_dssp SSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEECC
T ss_pred CCEEEeCCcEEEEECCcCCCcccceEEEEEEEEECC
Confidence 555554 23332222222112234677777766543
No 24
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*
Probab=99.97 E-value=4.7e-30 Score=220.47 Aligned_cols=175 Identities=22% Similarity=0.370 Sum_probs=148.2
Q ss_pred EecCCCcEEEEEEeCCCCceEEEECCccEEEEC---cCCCceeccEEEEE---EEEEeCCCCceeEEEEEEEEEecCCCC
Q psy11062 5 LLDQSNPIRYTIHSGDPEGYFTLDSTTGVIRTA---ATLDHEVTGVLLLS---VQASSGSPPLYSYAQVKVTIEDRNDNA 78 (281)
Q Consensus 5 d~d~~~~l~Y~i~~g~~~~~F~Id~~~G~i~~~---~~LD~E~~~~~~l~---v~a~dg~~~~~~~~~v~i~V~dvNd~~ 78 (281)
|.+.|+.+.|+|.+ +...+|.|++.+|.+++. +.||||....|.+. +.+.++.....+.+.|.|.|.|+|||+
T Consensus 46 d~~~n~~i~ysl~~-~~~~~f~id~~tg~~~l~~t~~~LDrE~~~~~~~~~~~v~~~~~~~~~~~~~~V~I~V~DvNDn~ 124 (242)
T 4apx_B 46 AGGPDPTIELSLKD-NVDYWVLLDPVKQMLFLNSTGRVLDRDPPMNIHSIVVQVQCVNKKVGTVIYHEVRIVVRDRNDNS 124 (242)
T ss_dssp BSSSSCSEEEEEES-CGGGCEEEETTTTEEEECCTTSCCCCSTTTCCCEEEEEEEEEETTTCCEEEEEEEEEEECCCCCC
T ss_pred CCCCCCEEEEEEec-CCCceEEECCCCCEEEEEecCCceeccCCCceEEEEEEEEeECCCCCeEEEEEEEEEEEeCCCCC
Confidence 44667889999964 445789999999999884 67999998766544 444455545667788999999999999
Q ss_pred CeeccCcEEEEEeCCCCCCceEEE-----EEEEeCCCCCCceEEEEEeeCCCC--CceeeEEeC-ceeEEEEceecCccC
Q psy11062 79 PEFESTTIRLSVPESAALGLPLYT-----VVARDKDSGDNGKIRYHLASGNFG--DSRLFAVDQ-TSGHLSLSKHLDYET 150 (281)
Q Consensus 79 P~f~~~~~~~~v~En~~~gt~v~~-----v~a~D~D~g~~~~i~y~l~~~~~~--~~~~F~id~-~tG~i~~~~~LD~E~ 150 (281)
|.|.+..|.+.|+||.++|+.|.+ +.|+|+|.|.|+.++|+|..++.. ....|.|+. .+|.|+++++||||.
T Consensus 125 P~F~~~~y~~~v~En~~~Gt~v~~~~~~~v~A~D~D~g~N~~v~Ysi~~~~~~~~~~~~F~Id~~~tG~i~~~~~LD~E~ 204 (242)
T 4apx_B 125 PTFKHESYYATVNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNPEDPTSNDTFEIPLMLTGNVVLRKRLNYED 204 (242)
T ss_dssp CEESSSCEEEEEETTCCTTCEEECTTTTTTSEECCSSGGGGCEEEEEECCTTSTTHHHHEECSSTTTCCEEECSCCCTTT
T ss_pred CcccceeeeeEeeeccCCCCEEEEeeecccccccCCCCcCCceEEEEecCCCCcccccceEEcCCCceEEEECCcCChhh
Confidence 999999999999999999999976 789999999999999999976532 246799985 589999999999999
Q ss_pred cceEEEEEEEEECCCCC---CeEEEEEEEEEEe
Q psy11062 151 SQRHTIVVSATDQGDPP---MSSNLTVLLEVQD 180 (281)
Q Consensus 151 ~~~y~l~V~a~D~~~p~---~~~~~~v~I~V~D 180 (281)
...|.|.|+|+|+|.|+ +++.+.|+|+|..
T Consensus 205 ~~~y~l~V~A~D~G~~~~~~~~~~~~vtVnVe~ 237 (242)
T 4apx_B 205 KTRYYVIIQANDRAQNLNERRTTTTTLTVDLEH 237 (242)
T ss_dssp CCEEEEEEEEEECCSSGGGCCEEEEEEEEEEEC
T ss_pred CCEEEEEEEEEECCcCchhcccCCceEEEEEee
Confidence 99999999999999884 7788999998875
No 25
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.97 E-value=8.5e-31 Score=201.42 Aligned_cols=118 Identities=36% Similarity=0.566 Sum_probs=110.8
Q ss_pred EEEEecCCCCCeeccCcEEEEEeCCCCCCceEEEEEEEeCCCCCCceEEEEEeeCCCCCceeeEEeCceeEEEEceecCc
Q psy11062 69 VTIEDRNDNAPEFESTTIRLSVPESAALGLPLYTVVARDKDSGDNGKIRYHLASGNFGDSRLFAVDQTSGHLSLSKHLDY 148 (281)
Q Consensus 69 i~V~dvNd~~P~f~~~~~~~~v~En~~~gt~v~~v~a~D~D~g~~~~i~y~l~~~~~~~~~~F~id~~tG~i~~~~~LD~ 148 (281)
+.|.|+|||+|.|.+..|.+.|+|+.++|+.++++.|+|+|.|.|+.++|+|..++.....+|.|++.+|.|+++++|||
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~F~Id~~tG~I~~~~~LD~ 81 (119)
T 2yst_A 2 SSGSSGNDNSPRFEKSVYEADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWLSVLHRIDR 81 (119)
T ss_dssp CCCCCSCCCCCCCSSSEEEEEEETTCCTTCEEEECCCCCSSSSCCSCCCCEECSCCTTHHHHEEECTTTCEEEECSCCCT
T ss_pred CeEecCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCCeEEEEEecCCCccccEEEEeCCceEEEECccCCc
Confidence 36899999999999999999999999999999999999999999999999999754223578999999999999999999
Q ss_pred cCcceEEEEEEEEECCCCCCeEEEEEEEEEEeCCCCCC
Q psy11062 149 ETSQRHTIVVSATDQGDPPMSSNLTVLLEVQDVNDNPP 186 (281)
Q Consensus 149 E~~~~y~l~V~a~D~~~p~~~~~~~v~I~V~DvND~~P 186 (281)
|....|.|.|+|+|+|.|++++++.|+|+|.|+|||+|
T Consensus 82 E~~~~y~l~V~A~D~g~p~~s~~~~v~I~V~DvNDn~P 119 (119)
T 2yst_A 82 EEVNQLRFTVMARDRGQPPKTDKATVVLNIKDENDNVP 119 (119)
T ss_dssp TTCSEEEEEEEECCSBTTBCCEEEEEEEEEECSTTCCC
T ss_pred ccCCEEEEEEEEEECCCCCcEEEEEEEEEEEeccCCCC
Confidence 99999999999999999999999999999999999998
No 26
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=99.96 E-value=4.1e-29 Score=211.18 Aligned_cols=176 Identities=23% Similarity=0.329 Sum_probs=145.6
Q ss_pred EEEEEeCCC--CCCceEEEEEEEeCCCCCCceEEEEEeeCCCCCceeeEEeCceeEEEEceecCccCcceEEEEEEEEEC
Q psy11062 86 IRLSVPESA--ALGLPLYTVVARDKDSGDNGKIRYHLASGNFGDSRLFAVDQTSGHLSLSKHLDYETSQRHTIVVSATDQ 163 (281)
Q Consensus 86 ~~~~v~En~--~~gt~v~~v~a~D~D~g~~~~i~y~l~~~~~~~~~~F~id~~tG~i~~~~~LD~E~~~~y~l~V~a~D~ 163 (281)
+.+.|.||. |.|+.++.+ |+|+|.| ++.++|+|.+++ ....|.|++.+|.|++.++||||....|.|.|+|+|+
T Consensus 6 ~~~~v~En~~~p~~~~v~~v-a~D~D~g-n~~i~Y~l~~~~--~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~ 81 (215)
T 2a4e_A 6 NQFFVIEEYTGPDPVLVGRL-HSDIDSG-DGNIKYILSGEG--AGTIFVIDDKSGNIHATKTLDREERAQYTLMAQAVDR 81 (215)
T ss_dssp CEEEEETTCCSSSCEEEEEC-CCTTCCS-SSCEEEEEEETT--BTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEET
T ss_pred eeEEEeccCCCCCCEEEEEE-EECCCCC-CCeEEEEEECCC--CCCeEEEECCceEEEECCccCCccCCEEEEEEEEEEC
Confidence 578899994 578889888 7999998 789999998742 3468999999999999999999999999999999999
Q ss_pred CC-CCCeEEEEEEEEEEeCCCCCCeeeCCceEEEEeCCCCCCcEEEEEEeeEEEeec---CccccEEEEEeecCChhhhh
Q psy11062 164 GD-PPMSSNLTVLLEVQDVNDNPPVFERSEYFVSVSEALPAKSQVRTTCTPLYVLVE---GQCSLVCWSTLRLMTHSTLK 239 (281)
Q Consensus 164 ~~-p~~~~~~~v~I~V~DvND~~P~f~~~~y~~~v~E~~~~gt~v~~v~A~~yd~d~---g~~~~~~~~~~~~~~~~~l~ 239 (281)
+. +++++.+.|+|+|.|+|||+|.|.+..|.+.|+|+.++|+.|++|.|+ |.|. |.|+.++|++......+.++
T Consensus 82 ~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~Gt~v~~v~A~--D~D~~~~G~n~~i~Y~i~~~~~~F~Id 159 (215)
T 2a4e_A 82 DTNRPLEPPSEFIVKVQDINDNPPEFLHEIYHANVPERSNVGTSVIQVTAS--DADDPTYGNSAKLVYSILEGQPYFSVE 159 (215)
T ss_dssp TTCCEEEEEEEEEEEEECCCCCCCEESSSSEEEEEETTCCTTCEEEECCEE--CSSCTTTCSSSCCEEEEEESTTTEEEC
T ss_pred CCCCcccccEEEEEEEeeCCCCCCCccCCceEEEEECCCCCCCEEEEEEEE--ECCCCCCCCceEEEEEEeCCCCcEEEe
Confidence 85 567889999999999999999999999999999999999999999999 8887 88999999998776655555
Q ss_pred c-cCCCCCC-CCcceEEEEEEEEEEecCcc
Q psy11062 240 S-ELNSPLG-SNSFQLSILWYSIFLRTNTM 267 (281)
Q Consensus 240 ~-~~~~~~~-~~~~~~~~~~y~~~~~~~~~ 267 (281)
. .|...+. ...-.-....|+|.|++.++
T Consensus 160 ~~tG~I~~~~~~LD~E~~~~y~l~V~A~D~ 189 (215)
T 2a4e_A 160 AQTGIIRTALPNMDREAKEEYHVVIQAKDM 189 (215)
T ss_dssp TTTCEEEECSSCCCSSSCSEEEEEEEEETT
T ss_pred CCccEEEEcccCCCcccCCEEEEEEEEEEC
Confidence 2 2332222 22222234568888877664
No 27
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=99.96 E-value=5.1e-29 Score=210.69 Aligned_cols=178 Identities=20% Similarity=0.263 Sum_probs=148.2
Q ss_pred EEEEeCCCCCCceEEEEEEEeCCCCCCceEEEEEeeCCC--CCceeeEEeCceeEEEEceecCccCcceEEEEEEEEECC
Q psy11062 87 RLSVPESAALGLPLYTVVARDKDSGDNGKIRYHLASGNF--GDSRLFAVDQTSGHLSLSKHLDYETSQRHTIVVSATDQG 164 (281)
Q Consensus 87 ~~~v~En~~~gt~v~~v~a~D~D~g~~~~i~y~l~~~~~--~~~~~F~id~~tG~i~~~~~LD~E~~~~y~l~V~a~D~~ 164 (281)
.++|+||++ |+.++.+.+.|.|.+.|+.++|+|.++.. .....|.|++.+|.|++.++||||....|.|.|+|+|++
T Consensus 6 ~~~V~En~~-g~~~~~v~~~~~D~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~g 84 (215)
T 2qvi_A 6 PINLPENSR-GPFPQELVRIRSDRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAVDIN 84 (215)
T ss_dssp CEEEESSCC-CCSSEEEEECCCGGGGTSCEEEEEESTTSSSTTCSSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETT
T ss_pred cEEEcCCCC-CCCCEEEEEEeCCCCCCceEEEEEECCCCCCCCCCcEEEeCCccEEEECcccCcccCCeEEEEEEEEECC
Confidence 578999998 98889999999999889999999997532 235789999999999999999999999999999999999
Q ss_pred CCCCeEEEEEEEEEEeCCCCCCeeeCCceEEEEeCCCCCCcEEEEEEeeEEEeec--CccccEEEEEeecC------Chh
Q psy11062 165 DPPMSSNLTVLLEVQDVNDNPPVFERSEYFVSVSEALPAKSQVRTTCTPLYVLVE--GQCSLVCWSTLRLM------THS 236 (281)
Q Consensus 165 ~p~~~~~~~v~I~V~DvND~~P~f~~~~y~~~v~E~~~~gt~v~~v~A~~yd~d~--g~~~~~~~~~~~~~------~~~ 236 (281)
.|++++++.|+|+|.|+|||+|.|.+..|.+.|+|+.++|+.|+++.|+ |.|. |.|+.++|++.... ..+
T Consensus 85 ~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~--D~D~~~g~n~~i~Y~i~~~~~~~~~~~~F 162 (215)
T 2qvi_A 85 GNQVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAI--DADDPNALNGMLRYRILSQAPSTPSPNMF 162 (215)
T ss_dssp TCCCEEEEEEEEEEECCCCCCCBCSSSEEEEEECSSCCTTCEEEECCCB--CSSCTTSTTTCCCCEEEECSSCCSSTTCE
T ss_pred CCceeeeEEEEEEEeECCCCCCcccCceeEEEEeCCCCCCCEEEEEEEE--eCCCCCCCCcEEEEEEecCCCCCCcCCeE
Confidence 9999999999999999999999999999999999999999999999999 8887 78999999988754 233
Q ss_pred hhhc-cCCCCCC-CCcceEEEEEEEEEEecCcc
Q psy11062 237 TLKS-ELNSPLG-SNSFQLSILWYSIFLRTNTM 267 (281)
Q Consensus 237 ~l~~-~~~~~~~-~~~~~~~~~~y~~~~~~~~~ 267 (281)
.++. .|...+. ...-.-....|+|.|+..++
T Consensus 163 ~Id~~tG~i~~~~~~LD~E~~~~y~l~V~a~D~ 195 (215)
T 2qvi_A 163 TINNETGDIITVAAGLDREKVQQYTLIIQATDM 195 (215)
T ss_dssp EECTTTCEEEECSCCCCTTTCSEEEEEEECCTT
T ss_pred EEcCCCcEEEEecCCCCcccCCeEEEEEEEEEC
Confidence 3332 2221111 11111234679999998775
No 28
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=99.96 E-value=1.7e-28 Score=205.73 Aligned_cols=173 Identities=15% Similarity=0.185 Sum_probs=145.5
Q ss_pred EEEEeCCCCCC--ceEEEEEEEeCCCCCCceEEEEEeeCCCCCceeeEEeCceeEEEEceecCccCcceEEEEEEEEECC
Q psy11062 87 RLSVPESAALG--LPLYTVVARDKDSGDNGKIRYHLASGNFGDSRLFAVDQTSGHLSLSKHLDYETSQRHTIVVSATDQG 164 (281)
Q Consensus 87 ~~~v~En~~~g--t~v~~v~a~D~D~g~~~~i~y~l~~~~~~~~~~F~id~~tG~i~~~~~LD~E~~~~y~l~V~a~D~~ 164 (281)
.+.|+||.+.| ..++++. +|+|.|.+ +|+|.+++ ....|.|++.+|.|++.++||||....|.|.|.|+|++
T Consensus 6 ~~~V~En~~~~~~~~v~~v~-~D~D~g~~---~Y~i~~~~--~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~g 79 (203)
T 3ppe_A 6 RMHIREEIDSPLPHHVGKLT-SSVGNKNA---MYIIEGES--ANTIFKVQGYDGDIYAFERLDREKKAEYELTAHIIDRR 79 (203)
T ss_dssp EEEEETTCCSSSCEEEEECC-BCCCCTTE---EEEEEETT--BTTTEEEETTTTEEEESSCCCTTTCCEEEEEEEEEETT
T ss_pred cEEEEccCCCCCCEEEEEEE-ecCCCCCc---EEEEecCC--CCCeEEEECCcCEEEECccccccccceEEEEEEEEECC
Confidence 57899999988 7888888 89998766 99999853 45689999999999999999999999999999999999
Q ss_pred CC-CCeEEEEEEEEEEeCCCCCCeeeCCceEEEEeCCCCCCcEEEEEEeeEEEeec---CccccEEEEEeecCChhhhhc
Q psy11062 165 DP-PMSSNLTVLLEVQDVNDNPPVFERSEYFVSVSEALPAKSQVRTTCTPLYVLVE---GQCSLVCWSTLRLMTHSTLKS 240 (281)
Q Consensus 165 ~p-~~~~~~~v~I~V~DvND~~P~f~~~~y~~~v~E~~~~gt~v~~v~A~~yd~d~---g~~~~~~~~~~~~~~~~~l~~ 240 (281)
.| ++++++.|+|.|.|+|||+|.|.+..|.+.|+|+.++|+.|+++.|+ |.|+ |.|+.+.|++....+.+.++.
T Consensus 80 ~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~--D~D~~~~g~n~~i~Y~i~~~~~~F~I~~ 157 (203)
T 3ppe_A 80 NNRSLEPPSKFIIKVSDINDNAPIFVQKIFNGSVPEMSRLGTSVTKVTAE--DADDPTVAGHATVTYQIIKGNEYFTVDD 157 (203)
T ss_dssp TTEECSCCEEEEEEEECCCCCCCEESCSEEEEEEETTCCTTCEEEECCEE--CCSCTTSSSTTCEEEEEEESTTTEEECT
T ss_pred CCCcccceEEEEEEEcCCCCCCCCccCCccEEEEeccCCCCcEEEEEEEE--cCCCcCCCCceEEEEEEeCCCCcEEEeC
Confidence 86 67888999999999999999999999999999999999999999999 8884 889999999988777666664
Q ss_pred cCCCCCC-CCcceEEEEEEEEEEecCcc
Q psy11062 241 ELNSPLG-SNSFQLSILWYSIFLRTNTM 267 (281)
Q Consensus 241 ~~~~~~~-~~~~~~~~~~y~~~~~~~~~ 267 (281)
.|...+. ...-.-....|+|.|++.++
T Consensus 158 tG~i~~~~~~LD~E~~~~y~l~V~A~D~ 185 (203)
T 3ppe_A 158 SGVIFTARADLDRESQSAYEIIVKAKDA 185 (203)
T ss_dssp TSEEEESCSCCCTTTCSEEEEEEEEEET
T ss_pred CeEEEECCcCCCcccCCEEEEEEEEEeC
Confidence 3433222 22222224468888887765
No 29
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=99.95 E-value=1.1e-29 Score=218.87 Aligned_cols=179 Identities=14% Similarity=0.058 Sum_probs=142.5
Q ss_pred eeccCcEEEEEeCCCCCCceEEEEEEEeCCCCC--CceEE------EEEeeCCCCCceeeEEeCceeEEEEceecCccCc
Q psy11062 80 EFESTTIRLSVPESAALGLPLYTVVARDKDSGD--NGKIR------YHLASGNFGDSRLFAVDQTSGHLSLSKHLDYETS 151 (281)
Q Consensus 80 ~f~~~~~~~~v~En~~~gt~v~~v~a~D~D~g~--~~~i~------y~l~~~~~~~~~~F~id~~tG~i~~~~~LD~E~~ 151 (281)
.|.+..|.+.|+|++++|+.|+++.|+|+|.|. +..+. |++..+ ...+|.|++.+|.|++.++||||..
T Consensus 2 ~F~~~~Y~~~V~E~~~~Gt~v~~v~A~D~D~g~~~~~~i~~~~~~~y~i~~~---~~~~F~Id~~tG~i~~~~~LDrE~~ 78 (246)
T 2x2u_A 2 YFSRDAYWEKLYVDQAAGTPLLYVHALRDAPEEVPSFRLGQHLYGTYRTRLH---ENNWIRIQEDTGLLYLQRSLDHSSW 78 (246)
T ss_dssp EESCSEEEEEEETTBCTTCEEEECCEECSSTTCCCCCEECSEEECGGGCEEE---ECCSEEECTTTCEEEESSCBCHHHH
T ss_pred CccCCceEEEeeCCCCCCCEEEEEEEEcCCCCCcceEEEeeccccceeccCC---CCCEEEECCCcEEEEECCcCChhHh
Confidence 588899999999999999999999999999854 34444 554442 3578999999999999999999999
Q ss_pred ceE------------EEEEEEEECCCC--CCeEEEEEEEEEEeCCCCCCe----------eeCCceEEEEeCCCCCCcEE
Q psy11062 152 QRH------------TIVVSATDQGDP--PMSSNLTVLLEVQDVNDNPPV----------FERSEYFVSVSEALPAKSQV 207 (281)
Q Consensus 152 ~~y------------~l~V~a~D~~~p--~~~~~~~v~I~V~DvND~~P~----------f~~~~y~~~v~E~~~~gt~v 207 (281)
..| .|.|.|+|.+.| ++++++.|+|+|.|+|||+|+ |.+..|.+.|+|+.++|+.|
T Consensus 79 ~~y~~~~~G~p~~~~~l~V~a~D~g~~~~~~~~~~~v~I~V~DvNDn~P~~~~~~~~~~~F~~~~y~~~v~En~~~Gt~v 158 (246)
T 2x2u_A 79 EKLSVRNRGFPLLTVYLKVFLSPTSLREGECQWPGCARVYFSFFNTSFPACSSLKPRELCFPETRPSFRIRENRPPGTFH 158 (246)
T ss_dssp HHHHHTSTTSCCCEEEEEEECC-------CCCTTTEEEEEEEEESSCCCCGGGCCHHHHHSCSSCCCEEEEBTSCCCEEE
T ss_pred hhhccccCCCcccceEEEEEEEcCCCCCCcccceEEEEEEEEECCCCCCccccccccccccCCCcEEEEEECCCCCCcEE
Confidence 999 999999999987 678899999999999999999 99999999999999999999
Q ss_pred EEEEeeEEEeecCccccEEEEEeecC-Chhhhhc-cCCCCCCCCcceEEEEEEEEEEe
Q psy11062 208 RTTCTPLYVLVEGQCSLVCWSTLRLM-THSTLKS-ELNSPLGSNSFQLSILWYSIFLR 263 (281)
Q Consensus 208 ~~v~A~~yd~d~g~~~~~~~~~~~~~-~~~~l~~-~~~~~~~~~~~~~~~~~y~~~~~ 263 (281)
+++.|+ |.|.|.|+.++|++.... ..+.++. .|...+....-.-....|.|.|+
T Consensus 159 ~~v~A~--D~D~g~n~~i~Y~i~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~ 214 (246)
T 2x2u_A 159 QFRLLP--VQFLCPQISVAYRLLEGEGLPFRSAPDSLEVSTRWALDREQREKYELVAV 214 (246)
T ss_dssp ECSCHH--HHHHCTTSCEEEEEESCTTSSEECCTTCCEEEESSCBCTTTCSEEEEEEE
T ss_pred EEEEEE--cCCCCCCcEEEEEEccCCCCCEEEECCcCEEEeCCccCccccceEEEEEE
Confidence 999999 999999999999997662 3344431 23222222222223456888887
No 30
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=99.95 E-value=6.5e-29 Score=208.90 Aligned_cols=175 Identities=19% Similarity=0.308 Sum_probs=141.2
Q ss_pred EEEEeCCCCCC--ceEEEEEEEeCCCCCCceEEEEEeeCCCCCceeeEEeCceeEEEEceecCccCcceEEEEEEEEECC
Q psy11062 87 RLSVPESAALG--LPLYTVVARDKDSGDNGKIRYHLASGNFGDSRLFAVDQTSGHLSLSKHLDYETSQRHTIVVSATDQG 164 (281)
Q Consensus 87 ~~~v~En~~~g--t~v~~v~a~D~D~g~~~~i~y~l~~~~~~~~~~F~id~~tG~i~~~~~LD~E~~~~y~l~V~a~D~~ 164 (281)
.+.|+||.+.| +.++.+ |+|+|.| ++.++|+|.+++ ....|.|++.+|.|++.++||||....|.|.|+|+|++
T Consensus 6 ~~~v~En~~~~~~~~v~~~-a~D~D~g-~~~i~Y~l~~~~--~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~ 81 (207)
T 3lnd_A 6 QFFLLEEYTGSDYQYVGKL-HSDQDRG-DGSLKYILSGDG--AGDLFIINENTGDIQATKRLDREEKPVYILRAQAVNRR 81 (207)
T ss_dssp CEEEESCBCSSSCEEEEEC-CCTTCCS-STTBCCCCCSSS--BTTTEEECTTTCEEEECSCCCGGGCCEEEC----CBSS
T ss_pred ccEEEeecCCCCCEEEEEE-EeCCCCC-CceEEEEEECCC--CCCeEEEECCceEEEECCCcCcccCCEEEEEEEEEECC
Confidence 46799998855 478888 8999998 678999998743 34689999999999999999999999999999999988
Q ss_pred -CCCCeEEEEEEEEEEeCCCCCCeeeCCceEEEEeCCCCCCcEEEEEEeeEEEeec---CccccEEEEEeecCChhhhhc
Q psy11062 165 -DPPMSSNLTVLLEVQDVNDNPPVFERSEYFVSVSEALPAKSQVRTTCTPLYVLVE---GQCSLVCWSTLRLMTHSTLKS 240 (281)
Q Consensus 165 -~p~~~~~~~v~I~V~DvND~~P~f~~~~y~~~v~E~~~~gt~v~~v~A~~yd~d~---g~~~~~~~~~~~~~~~~~l~~ 240 (281)
.+++++++.|+|.|.|+|||+|.|.+..|.+.|+|+.++|+.|+++.|+ |.|. |.|+.+.|++....+.+.++.
T Consensus 82 ~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~--D~D~~~~g~n~~i~Y~i~~~~~~F~Id~ 159 (207)
T 3lnd_A 82 TGRPVEPESEFIIKIHDINDNEPIFTKDVYTATVPEMADVGTFVVQVTAT--DADDPTYGNSAKVVYSILQGQPYFSVES 159 (207)
T ss_dssp SCCCCSCCCCCEEEEECCSCCCCEESCSEEEEEEESSCCTTCEEEECCEE--CSSCTTSSSTTCCEEEEEESGGGEEECT
T ss_pred CCCccccEEEEEEEECccCCCCCccCCCceEEEEeCCCCCCCEEEEEEEE--eCCCCCCCCCcEEEEEEcCCCCCEEEcC
Confidence 4678889999999999999999999999999999999999999999999 8888 889999999988766555542
Q ss_pred -cCCCCCC-CCcceEEEEEEEEEEecCcc
Q psy11062 241 -ELNSPLG-SNSFQLSILWYSIFLRTNTM 267 (281)
Q Consensus 241 -~~~~~~~-~~~~~~~~~~y~~~~~~~~~ 267 (281)
.|...+. ...-.-....|+|.|++.++
T Consensus 160 ~tG~i~~~~~~lD~E~~~~y~l~V~A~D~ 188 (207)
T 3lnd_A 160 ETGIIKTALLNMDRENREQYQVVIQAKDM 188 (207)
T ss_dssp TTCEEEECCSSCCC--CCEEEEEEEEESG
T ss_pred CCcEEEECcccCCcccCCEEEEEEEEEEC
Confidence 2333222 23333345678899887775
No 31
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=99.95 E-value=1.1e-27 Score=202.29 Aligned_cols=176 Identities=16% Similarity=0.243 Sum_probs=143.3
Q ss_pred EEEEeCCCC--CCceEEEEEEEeCCCCCCceEEEEEeeCCC--CCceeeEEeCceeEEEEceecCccCcceEEEEEEEEE
Q psy11062 87 RLSVPESAA--LGLPLYTVVARDKDSGDNGKIRYHLASGNF--GDSRLFAVDQTSGHLSLSKHLDYETSQRHTIVVSATD 162 (281)
Q Consensus 87 ~~~v~En~~--~gt~v~~v~a~D~D~g~~~~i~y~l~~~~~--~~~~~F~id~~tG~i~~~~~LD~E~~~~y~l~V~a~D 162 (281)
.++|+||.+ .|+.++++.| |+|. ++.++|+|.++.. +..++|.|++.+|.|++.++||||....|.|.|.|+|
T Consensus 6 ~~~V~En~~~~~~~~v~~v~a-D~d~--n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D 82 (213)
T 3qrb_A 6 AISCPENEKGEFPKNLVQIKS-NRDK--ETKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREAIAKYILYSHAVS 82 (213)
T ss_dssp EEEEETTCCSSSSEEEEECCC-GGGG--TSCEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEE
T ss_pred CEEEeCCCCCCCCcEEEEEEE-CCCC--CceEEEEEEcCCCCCCCCCeEEEECCCCEEEECCccCcccCceEEEEEEEEe
Confidence 688999998 6788999988 7774 7899999997432 2345899999999999999999999999999999999
Q ss_pred CCCCCCeEEEEEEEEEEeCCCCCCeeeCCceEEEEeCCCCCCcEEEEEEeeEEEeecC---ccccEEEEEeecC------
Q psy11062 163 QGDPPMSSNLTVLLEVQDVNDNPPVFERSEYFVSVSEALPAKSQVRTTCTPLYVLVEG---QCSLVCWSTLRLM------ 233 (281)
Q Consensus 163 ~~~p~~~~~~~v~I~V~DvND~~P~f~~~~y~~~v~E~~~~gt~v~~v~A~~yd~d~g---~~~~~~~~~~~~~------ 233 (281)
.+.+++++++.|+|.|.|+|||+|.|.+..|.+.|+|+.++|+.|+++.|+ |.|.| .|+.++|++....
T Consensus 83 ~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~--D~D~~~~~~n~~i~Y~i~~~~~~~~~~ 160 (213)
T 3qrb_A 83 SNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGAVPGTSVMKVSAT--DADDDVNTYNAAIAYTIVSQDPELPHK 160 (213)
T ss_dssp TTSCBCSCCEEEEEEEECCSCCCCEESCSEEEEEEETTCCTTCEEEECCEE--CCSCTTTSSTTCCEEEEEEEESCCSCS
T ss_pred CCCCcccceEEEEEEEEEccCCCCccCCCceEEEEECCCCCCcEEEEEEEE--eCCCCCCCcCcEEEEEEccCCCCCCcC
Confidence 999989999999999999999999999999999999999999999999999 99998 8999999987643
Q ss_pred Chhhhhc-cCCCCCC-CCcceEEEEEEEEEEecCcc
Q psy11062 234 THSTLKS-ELNSPLG-SNSFQLSILWYSIFLRTNTM 267 (281)
Q Consensus 234 ~~~~l~~-~~~~~~~-~~~~~~~~~~y~~~~~~~~~ 267 (281)
..+.++. .|...+. ...-.-....|+|.|+..++
T Consensus 161 ~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~A~D~ 196 (213)
T 3qrb_A 161 NMFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADL 196 (213)
T ss_dssp CSEEECTTTCEEEECSSCCCTTTCCEEEEEEEEETG
T ss_pred CeEEEECCCcEEEEccCCCCCccCceEEEEEEEEeC
Confidence 2344432 2222111 11111224468888887774
No 32
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=99.95 E-value=1.4e-27 Score=202.27 Aligned_cols=176 Identities=18% Similarity=0.230 Sum_probs=142.8
Q ss_pred EEEEeCCCCCC--ceEEEEEEEeCCCCCCceEEEEEeeCC--CCCceeeEEeCceeEEEEceecCccCcceEEEEEEEEE
Q psy11062 87 RLSVPESAALG--LPLYTVVARDKDSGDNGKIRYHLASGN--FGDSRLFAVDQTSGHLSLSKHLDYETSQRHTIVVSATD 162 (281)
Q Consensus 87 ~~~v~En~~~g--t~v~~v~a~D~D~g~~~~i~y~l~~~~--~~~~~~F~id~~tG~i~~~~~LD~E~~~~y~l~V~a~D 162 (281)
.+.|+||.+.| +.++++.|.|+|. .++|+|.++. .+....|.|++.+|.|++.++||||....|.|.|+|+|
T Consensus 7 ~~~V~En~~~g~~~~v~~v~a~D~d~----~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D 82 (218)
T 3k5r_A 7 PILIPENQRQPFPRDVGKVVDSDRPE----GSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDRETIATYQLYVETTD 82 (218)
T ss_dssp CEEEETTCCSSCCEEEEECBCTTCCT----TCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEC
T ss_pred cEEEecCCCCCCCEEEEEEEecCCCc----eEEEEEEcCCCCCCCCCeEEEeCCceEEEECCcCCcccCCEEEEEEEEEE
Confidence 57899999988 7788898888774 6899998632 13458999999999999999999999999999999999
Q ss_pred CCCCCCeEEEEEEEEEEeCCCCCCeeeCCceEEEEeCCCCCCcEEEEEEeeEEEeec--CccccEEEEEeecCC------
Q psy11062 163 QGDPPMSSNLTVLLEVQDVNDNPPVFERSEYFVSVSEALPAKSQVRTTCTPLYVLVE--GQCSLVCWSTLRLMT------ 234 (281)
Q Consensus 163 ~~~p~~~~~~~v~I~V~DvND~~P~f~~~~y~~~v~E~~~~gt~v~~v~A~~yd~d~--g~~~~~~~~~~~~~~------ 234 (281)
.+.|++++++.|+|.|.|+|||+|.|.+..|.+.|+|+.++|+.|++|.|+ |.|. |.|+.++|++.....
T Consensus 83 ~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~--D~D~~~g~n~~i~Y~i~~~~~~~~~~~ 160 (218)
T 3k5r_A 83 ASGKTLEGPVPLEVIVIDQNDNRPIFREGPYIGHVMEGSPTGTTVMRMTAF--DADDPATDNALLRYNIRQQTPDKPSPN 160 (218)
T ss_dssp SSSCEEEEEEEEEEEEECTTCCCCCCCSCSEEEEEETTCCTTCEEEECCCS--CSSSSCGGGGCEEEEEEEEESCCSCSC
T ss_pred CCCCceeeeEEEEEEEEeCCCCCCcccCCceEEEEECCCCCCCEEEEEEEE--eCCCCCCCCcEEEEEEecCCCCCCcCC
Confidence 999989999999999999999999999999999999999999999999999 8888 789999999876543
Q ss_pred hhhhhc-cCCCCCC---CCcceEE--EEEEEEEEecCcce
Q psy11062 235 HSTLKS-ELNSPLG---SNSFQLS--ILWYSIFLRTNTMQ 268 (281)
Q Consensus 235 ~~~l~~-~~~~~~~---~~~~~~~--~~~y~~~~~~~~~~ 268 (281)
.+.++. .|...+. ...-.-. ...|+|.|+..++-
T Consensus 161 ~F~Id~~tG~i~~~~~~~~LD~E~~~~~~y~l~V~a~D~g 200 (218)
T 3k5r_A 161 MFYIDPEKGDIVTVVSPALLDRETLENPKYELIIEAQDMA 200 (218)
T ss_dssp SEEECTTTCEEEECSCGGGCCGGGCSCSEEEEEEEEEECS
T ss_pred EEEEECCccEEEEeccCCCCCccccCCCeEEEEEEEEECC
Confidence 244432 2321111 1111112 44788888876653
No 33
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.94 E-value=2.8e-27 Score=180.33 Aligned_cols=112 Identities=33% Similarity=0.557 Sum_probs=103.2
Q ss_pred EEEEecCCCCCeeccCcEEEEEeCCCCCCceEEEEEEEeCCCCCCceEEEEEeeCCC-CCceeeEEeCceeEEEEceecC
Q psy11062 69 VTIEDRNDNAPEFESTTIRLSVPESAALGLPLYTVVARDKDSGDNGKIRYHLASGNF-GDSRLFAVDQTSGHLSLSKHLD 147 (281)
Q Consensus 69 i~V~dvNd~~P~f~~~~~~~~v~En~~~gt~v~~v~a~D~D~g~~~~i~y~l~~~~~-~~~~~F~id~~tG~i~~~~~LD 147 (281)
|.|.|+|||+|.|.+..|.+.|+||.++|+.++++.|+|+|.|.|+.++|+|....+ ....+|.|++.+|.|++.++||
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~F~Id~~tG~I~~~~~LD 81 (114)
T 2ee0_A 2 SSGSSGNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLD 81 (114)
T ss_dssp CCCCCCCCCCCCCSCSEEEEEEETTCCTTCEEEECCCCSCSSCCCSCCEEEECSSCCHHHHHHEEECTTTCEEEECSCCC
T ss_pred CeEeeCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCcEEEEEEccCCCCCccceEEEeCCeeEEEECccCC
Confidence 468999999999999999999999999999999999999999999999999986321 2467899999999999999999
Q ss_pred ccCcceEEEEEEEEECCCCCCeEEEEEEEEEEeCC
Q psy11062 148 YETSQRHTIVVSATDQGDPPMSSNLTVLLEVQDVN 182 (281)
Q Consensus 148 ~E~~~~y~l~V~a~D~~~p~~~~~~~v~I~V~DvN 182 (281)
||....|.|.|+|+|++.|+ ++++|+|+|+|+|
T Consensus 82 ~E~~~~y~l~V~A~D~g~~~--~~~~v~I~V~DvN 114 (114)
T 2ee0_A 82 REETAIHKVTVLASDGSSTP--ARATVTINVTDVN 114 (114)
T ss_dssp TTTCSEEEEEEEEESSSSSC--EEEEEEEEEECCC
T ss_pred cccCcEEEEEEEEEECCCCc--eEEEEEEEEEECC
Confidence 99999999999999999875 7899999999997
No 34
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.91 E-value=4.3e-25 Score=170.40 Aligned_cols=116 Identities=21% Similarity=0.307 Sum_probs=106.0
Q ss_pred cCCCCCeeccCcEEEEEeCCCCCCceEEEEEEEeCCCCCCceEEEEEeeCCC--CCceeeEEeCceeEEEEceecCccCc
Q psy11062 74 RNDNAPEFESTTIRLSVPESAALGLPLYTVVARDKDSGDNGKIRYHLASGNF--GDSRLFAVDQTSGHLSLSKHLDYETS 151 (281)
Q Consensus 74 vNd~~P~f~~~~~~~~v~En~~~gt~v~~v~a~D~D~g~~~~i~y~l~~~~~--~~~~~F~id~~tG~i~~~~~LD~E~~ 151 (281)
.+.|.|.|....|.+.+.|+.++|+.|+++. +|+|.|.|+.++|+|.++.. .....|.||+.+|.|++.++||||..
T Consensus 5 ~~r~~p~f~~~~~~v~e~e~~~~gt~v~~v~-~D~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~ 83 (123)
T 2yqg_A 5 SSGQKRAWITAPVALREGEDLSKKNPIAKIH-SDLAEERGLKITYKYTGKGITEPPFGIFVFNKDTGELNVTSILDREET 83 (123)
T ss_dssp SSCSCCSSCCCCEEEESSSCCCSSCCCBCCC-CHHHHHHTCCCEEEEEEBTTTBSSCSSEEEETTTTEEEECSCCBTTTB
T ss_pred ccccCCccCCCCEEEEecCCCCCCCEEEEEE-ECCCCCCCceEEEEEecCCCCCCcCCCEEEeCCcCEEEECcccCcccC
Confidence 3678999999999988889999999999999 69999999999999997521 23578999999999999999999999
Q ss_pred ceEEEEEEEEECCCCCCeEEEEEEEEEEeCCCCCCeeeC
Q psy11062 152 QRHTIVVSATDQGDPPMSSNLTVLLEVQDVNDNPPVFER 190 (281)
Q Consensus 152 ~~y~l~V~a~D~~~p~~~~~~~v~I~V~DvND~~P~f~~ 190 (281)
..|.|.|.|+|++.|++++++.|.|.|+|+|||+|+|.+
T Consensus 84 ~~y~l~V~A~D~g~p~~~~~~~v~I~V~DvNDn~P~F~~ 122 (123)
T 2yqg_A 84 PFFLLTGYALDARGNNVEKPLELRIKVLDINDNEPVFTQ 122 (123)
T ss_dssp SEEEEEEEEECTTCCEEEEEECCEEEEECTTCCCCCCCC
T ss_pred ceEEEEEEEEECCCCceEEEEEEEEEEEEcCCCCCEeCC
Confidence 999999999999999999999999999999999999975
No 35
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*
Probab=99.90 E-value=1.8e-23 Score=179.37 Aligned_cols=178 Identities=17% Similarity=0.182 Sum_probs=135.7
Q ss_pred cEEEEEeCCCCCCceEEEEEE-EeCCCCCCceEEEEEeeCCCCCceeeEEeCceeEEEEc---eecCccCcceEEEEEEE
Q psy11062 85 TIRLSVPESAALGLPLYTVVA-RDKDSGDNGKIRYHLASGNFGDSRLFAVDQTSGHLSLS---KHLDYETSQRHTIVVSA 160 (281)
Q Consensus 85 ~~~~~v~En~~~gt~v~~v~a-~D~D~g~~~~i~y~l~~~~~~~~~~F~id~~tG~i~~~---~~LD~E~~~~y~l~V~a 160 (281)
.+.+.|+|++++|+.+..+.+ .|.|.+.++.++|+|.+ ....+|.|++.+|.+.+. +.||||....|.+.+.+
T Consensus 21 ~~~vsV~E~sp~GTvv~~~~~~~~~d~~~n~~i~ysl~~---~~~~~f~id~~tg~~~l~~t~~~LDrE~~~~~~~~~~~ 97 (242)
T 4apx_B 21 ATIVAIDEESRNGTILVDNMLIKGTAGGPDPTIELSLKD---NVDYWVLLDPVKQMLFLNSTGRVLDRDPPMNIHSIVVQ 97 (242)
T ss_dssp SEEEEEETTCCTTCEEESCCCBSSCBSSSSCSEEEEEES---CGGGCEEEETTTTEEEECCTTSCCCCSTTTCCCEEEEE
T ss_pred eEEEEeeCCCCCCCEEEEEEEecCCCCCCCCEEEEEEec---CCCceEEECCCCCEEEEEecCCceeccCCCceEEEEEE
Confidence 467889999999999876554 45557789999999987 356789999999999875 67999988777665555
Q ss_pred EECCCC--CCeEEEEEEEEEEeCCCCCCeeeCCceEEEEeCCCCCCcEEEE-----EEeeEEEeecCccccEEEEEeecC
Q psy11062 161 TDQGDP--PMSSNLTVLLEVQDVNDNPPVFERSEYFVSVSEALPAKSQVRT-----TCTPLYVLVEGQCSLVCWSTLRLM 233 (281)
Q Consensus 161 ~D~~~p--~~~~~~~v~I~V~DvND~~P~f~~~~y~~~v~E~~~~gt~v~~-----v~A~~yd~d~g~~~~~~~~~~~~~ 233 (281)
.++..+ ...+.+.|+|.|.|+|||+|.|.+..|.+.|+|+.++|+.|++ +.|+ |.|.|.||.++|++....
T Consensus 98 v~~~~~~~~~~~~~~V~I~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~~~~~~v~A~--D~D~g~N~~v~Ysi~~~~ 175 (242)
T 4apx_B 98 VQCVNKKVGTVIYHEVRIVVRDRNDNSPTFKHESYYATVNELTPVGTTIFTGFSGDNGAT--DIDDGPNGQIEYVIQYNP 175 (242)
T ss_dssp EEEEETTTCCEEEEEEEEEEECCCCCCCEESSSCEEEEEETTCCTTCEEECTTTTTTSEE--CCSSGGGGCEEEEEECCT
T ss_pred EEeECCCCCeEEEEEEEEEEEeCCCCCCcccceeeeeEeeeccCCCCEEEEeeecccccc--cCCCCcCCceEEEEecCC
Confidence 553332 3567788999999999999999999999999999999999987 6788 999999999999987654
Q ss_pred Ch------hhhh--ccCCCCCCCCcceEEEEEEEEEEecCcc
Q psy11062 234 TH------STLK--SELNSPLGSNSFQLSILWYSIFLRTNTM 267 (281)
Q Consensus 234 ~~------~~l~--~~~~~~~~~~~~~~~~~~y~~~~~~~~~ 267 (281)
.. +.++ ..|...+.+..-.-....|+|.|++.++
T Consensus 176 ~~~~~~~~F~Id~~~tG~i~~~~~LD~E~~~~y~l~V~A~D~ 217 (242)
T 4apx_B 176 EDPTSNDTFEIPLMLTGNVVLRKRLNYEDKTRYYVIIQANDR 217 (242)
T ss_dssp TSTTHHHHEECSSTTTCCEEECSCCCTTTCCEEEEEEEEEEC
T ss_pred CCcccccceEEcCCCceEEEECCcCChhhCCEEEEEEEEEEC
Confidence 32 2222 1244333332222234568888887664
No 36
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A
Probab=99.87 E-value=9.2e-23 Score=154.22 Aligned_cols=103 Identities=25% Similarity=0.395 Sum_probs=81.2
Q ss_pred cEEEEEeCCCCCCceEEEEEEEeCCCCCCceEEEEEeeCC--CCCceeeEEeCceeEEEEceecCccCcceEEEEEEEEE
Q psy11062 85 TIRLSVPESAALGLPLYTVVARDKDSGDNGKIRYHLASGN--FGDSRLFAVDQTSGHLSLSKHLDYETSQRHTIVVSATD 162 (281)
Q Consensus 85 ~~~~~v~En~~~gt~v~~v~a~D~D~g~~~~i~y~l~~~~--~~~~~~F~id~~tG~i~~~~~LD~E~~~~y~l~V~a~D 162 (281)
.|.++|+||+++|+.+..++. |.|.|.|+.++|+|.++. ......|.|++.+|.|++.++||||....|.|.|.|+|
T Consensus 6 ~~~~~v~En~~~gt~~~v~~v-d~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D 84 (110)
T 1ncg_A 6 IPPINLPENSRGPFPQELVRI-RSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAVD 84 (110)
T ss_dssp CCCEEECSSCCCCSSEEEEEC-CCGGGGGSCCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEC
T ss_pred eeeEEEeCCCCCCCcEEEEEE-eCCCCCCCEEEEEEeCCCCCCCcCCEEEEECCCCEEEECCcCCcccCCeEEEEEEEEE
Confidence 457899999999995332222 788888999999999632 13467899999999999999999999999999999999
Q ss_pred CCCCCCeEEEEEEEEEEeCCCCCCee
Q psy11062 163 QGDPPMSSNLTVLLEVQDVNDNPPVF 188 (281)
Q Consensus 163 ~~~p~~~~~~~v~I~V~DvND~~P~f 188 (281)
++.|++++++.|+|.|+|+|||+|+|
T Consensus 85 ~g~p~~~~~~~v~I~V~DvNDn~P~F 110 (110)
T 1ncg_A 85 INGNQVENPIDIVINVIDMNDNRPEF 110 (110)
T ss_dssp TTSCBCSCCEEEEEEEC---------
T ss_pred CCCCceeeEEEEEEEEEECCCCCCCC
Confidence 99999999999999999999999998
No 37
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}
Probab=99.81 E-value=2e-21 Score=150.09 Aligned_cols=106 Identities=26% Similarity=0.309 Sum_probs=90.9
Q ss_pred CcEEEEEeCCCCCCceEEEEEEEeCCCCCCceE---EEEEeeCCCCCceeeEEeCceeEEEEceecCccCc----ceEEE
Q psy11062 84 TTIRLSVPESAALGLPLYTVVARDKDSGDNGKI---RYHLASGNFGDSRLFAVDQTSGHLSLSKHLDYETS----QRHTI 156 (281)
Q Consensus 84 ~~~~~~v~En~~~gt~v~~v~a~D~D~g~~~~i---~y~l~~~~~~~~~~F~id~~tG~i~~~~~LD~E~~----~~y~l 156 (281)
..+.+.|+|+.++|+.|+++ |+|.|.+. +.+ +|+|..++ ...+|.||+.+|.|++.++||||.. ..|.|
T Consensus 11 ~~~~~~V~E~~~~Gt~V~~v-a~D~d~~~-~~i~~~~Y~i~~~~--~~~~F~Id~~tG~i~~~~~LDRE~~c~~~~~y~l 86 (125)
T 1wyj_A 11 ATITYSVLEETDRGSLVGNL-AKDLGLSL-RELITRGAQILSKG--NKQLLQLEQKSGNLLLKEKLDREELCGSTNPCIL 86 (125)
T ss_dssp CCCCEEECSSCCTTCEEEES-TTTTTCCH-HHHHHTTCEEECSS--SSCSEEECSSSSEEEESSCCCSTTTCTTCSSCCB
T ss_pred ceEEEEEECCCCCCCEEEEE-EecCCCCC-CceeeEEEEEecCC--CCCeEEEECCccEEEECccccchhhcccCCcEEE
Confidence 45678899999999999999 89988764 334 89998753 4679999999999999999999998 99999
Q ss_pred EEEEEECCCCCCeEEEEEEEEEEeCCCCCCeeeCCceEEE
Q psy11062 157 VVSATDQGDPPMSSNLTVLLEVQDVNDNPPVFERSEYFVS 196 (281)
Q Consensus 157 ~V~a~D~~~p~~~~~~~v~I~V~DvND~~P~f~~~~y~~~ 196 (281)
.|+|.+.. | . ..+.|+|.|+|+|||+|+|.++.|.+.
T Consensus 87 ~v~a~~~~-p-~-~~~~V~I~V~DvNDN~P~F~~~~y~vs 123 (125)
T 1wyj_A 87 HFQVLLKS-P-V-QFIQGEIQLQDVNDHAPEFMEDESGPS 123 (125)
T ss_dssp CCEEEETT-T-T-EEECCCEEECCCCCCCCCCCCCCCCCC
T ss_pred EEEEEECC-C-C-eEEEEEEEEEEccCCCCcCCCcEEEEe
Confidence 99999843 2 3 478999999999999999999988654
No 38
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus}
Probab=99.79 E-value=3.8e-19 Score=131.54 Aligned_cols=91 Identities=26% Similarity=0.406 Sum_probs=82.8
Q ss_pred EEEEEeCCCC--CCceEEEEEEEeCCCCCCceEEEEEeeCCCCCceeeEEeCceeEEEEceecCccCcceEEEEEEEEEC
Q psy11062 86 IRLSVPESAA--LGLPLYTVVARDKDSGDNGKIRYHLASGNFGDSRLFAVDQTSGHLSLSKHLDYETSQRHTIVVSATDQ 163 (281)
Q Consensus 86 ~~~~v~En~~--~gt~v~~v~a~D~D~g~~~~i~y~l~~~~~~~~~~F~id~~tG~i~~~~~LD~E~~~~y~l~V~a~D~ 163 (281)
..+.|+||.+ .|+.++++. +|+|.| |+.++|+|.++. ....|.||+.+|.|++.++||||+...|.|+|+|+|.
T Consensus 6 ~~~~v~En~~~~~g~~v~~v~-~D~D~g-Ng~v~Ysi~~~~--~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D~ 81 (99)
T 1zvn_A 6 NQFFVLEEYTGTDPLYVGKLH-SDMDRG-DGSIKYILSGEG--AGIVFTIDDTTGDIHAIQRLDREERSQYTLRAQALDR 81 (99)
T ss_dssp CEEEEEGGGCSSSCEEEEECC-BTTCCS-SSCEEEEEEETT--BTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEET
T ss_pred cEEEEECCCCCCCCcEEEEEE-ECCCCC-CCEEEEEEeCCC--CCceEEEeCCCCCEEECeecCCccCCeEEEEEEEEEC
Confidence 4678999976 689999999 999999 999999998743 3468999999999999999999999999999999999
Q ss_pred C-CCCCeEEEEEEEEEEe
Q psy11062 164 G-DPPMSSNLTVLLEVQD 180 (281)
Q Consensus 164 ~-~p~~~~~~~v~I~V~D 180 (281)
| .|++++++.|.|.|.|
T Consensus 82 G~~p~l~~~~~v~I~V~D 99 (99)
T 1zvn_A 82 RTGRPMEPESEFIIKIQD 99 (99)
T ss_dssp TTCCBSSCCEEEEEEEEC
T ss_pred CCCCCcceeEEEEEEEeC
Confidence 9 5889999999999987
No 39
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A
Probab=99.78 E-value=4.4e-19 Score=131.02 Aligned_cols=91 Identities=24% Similarity=0.372 Sum_probs=80.6
Q ss_pred EEEEEeCCCC--CCceEEEEEEEeCCCCCCceEEEEEeeCCCCCceeeEEeCceeEEEEceecCccCcceEEEEEEEEEC
Q psy11062 86 IRLSVPESAA--LGLPLYTVVARDKDSGDNGKIRYHLASGNFGDSRLFAVDQTSGHLSLSKHLDYETSQRHTIVVSATDQ 163 (281)
Q Consensus 86 ~~~~v~En~~--~gt~v~~v~a~D~D~g~~~~i~y~l~~~~~~~~~~F~id~~tG~i~~~~~LD~E~~~~y~l~V~a~D~ 163 (281)
+.+.|+||.+ .|+.++++. +|+|.| |+.++|+|.++. ....|.||+.+|.|++.++||||+...|.|+|+|+|+
T Consensus 5 ~~~~v~En~~~p~~~~v~~v~-~D~D~g-N~~v~Ysi~~~~--~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~A~D~ 80 (98)
T 1zxk_A 5 NQMFVLEEFSGPEPILVGRLH-TDLDPG-SKKIKYILSGDG--AGTIFQINDITGDIHAIKRLDREEKAEYTLTAQAVDF 80 (98)
T ss_dssp CEEEECGGGCSSSCEEEEECC-BCCCCC---CEEEEEEETT--BTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEET
T ss_pred ceEEEECCCCCCCCeEEEEEE-ECCCCC-CCEEEEEEeCCC--CCCEEEEECCccEEEECccCCCcCCCeEEEEEEEEEC
Confidence 4678999985 899999997 999999 999999998742 3458999999999999999999999999999999999
Q ss_pred CC-CCCeEEEEEEEEEEe
Q psy11062 164 GD-PPMSSNLTVLLEVQD 180 (281)
Q Consensus 164 ~~-p~~~~~~~v~I~V~D 180 (281)
|. |++++++.|+|.|.|
T Consensus 81 g~~~~l~~~~~v~I~V~D 98 (98)
T 1zxk_A 81 ETNKPLEPPSEFIIKVQD 98 (98)
T ss_dssp TTCCBSSCCEEEEEEECC
T ss_pred CCCCCcceeEEEEEEEEC
Confidence 97 788999999999987
No 40
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A
Probab=99.76 E-value=2.4e-18 Score=127.31 Aligned_cols=90 Identities=22% Similarity=0.328 Sum_probs=81.7
Q ss_pred EEEEeCCCCC--CceEEEEEEEeCCCCCCceEEEEEeeC--CCCCceeeEEeCceeEEEEceecCccCcceEEEEEEEEE
Q psy11062 87 RLSVPESAAL--GLPLYTVVARDKDSGDNGKIRYHLASG--NFGDSRLFAVDQTSGHLSLSKHLDYETSQRHTIVVSATD 162 (281)
Q Consensus 87 ~~~v~En~~~--gt~v~~v~a~D~D~g~~~~i~y~l~~~--~~~~~~~F~id~~tG~i~~~~~LD~E~~~~y~l~V~a~D 162 (281)
.+.|+||.++ |+.++++.|+|+|. .++|+|.+. ..+....|.||+.+|.|++.++||||....|.|.|+|+|
T Consensus 6 ~~~V~En~~~~~g~~v~~v~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D 81 (99)
T 3k6d_A 6 SISIPENQRIPFPKIVGRVVVSDRIP----GSKIKLYGKGVDQEPKGIFKINENSGEVSVTKALDREAIPSYQLQVETTD 81 (99)
T ss_dssp CEEEETTCCSCSSEEEEECBCSSCCT----TCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEC
T ss_pred cEEEeCCCCCCCCcEEEEEEEECCCC----cEEEEEecCcCCCCCCCEEEEECCceEEEECcCCCcccCceEEEEEEEEE
Confidence 5789999999 99999999999996 699999852 123467899999999999999999999999999999999
Q ss_pred CCCCCCeEEEEEEEEEEe
Q psy11062 163 QGDPPMSSNLTVLLEVQD 180 (281)
Q Consensus 163 ~~~p~~~~~~~v~I~V~D 180 (281)
+|.|++++.+.|+|+|+|
T Consensus 82 ~g~~~l~~~~~v~I~V~D 99 (99)
T 3k6d_A 82 ENGKTIEGPVDLEILVID 99 (99)
T ss_dssp TTCCEEEEEEEEEEEEEC
T ss_pred CCCCceeeEEEEEEEEEC
Confidence 999999999999999987
No 41
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus}
Probab=99.75 E-value=6.8e-18 Score=125.13 Aligned_cols=90 Identities=20% Similarity=0.317 Sum_probs=81.1
Q ss_pred EEEEeCCCCC--CceEEEEEEEeCCCCCCceEEEEEeeCC--CCCceeeEEeCceeEEEEceecCccCcceEEEEEEEEE
Q psy11062 87 RLSVPESAAL--GLPLYTVVARDKDSGDNGKIRYHLASGN--FGDSRLFAVDQTSGHLSLSKHLDYETSQRHTIVVSATD 162 (281)
Q Consensus 87 ~~~v~En~~~--gt~v~~v~a~D~D~g~~~~i~y~l~~~~--~~~~~~F~id~~tG~i~~~~~LD~E~~~~y~l~V~a~D 162 (281)
.+.|+||.+. |+.+++|.|+|+|. .++|+|.+.. ......|.||+.+|.|++.++||||+...|.|.|+|+|
T Consensus 7 ~~~V~EN~~~~~g~~v~~V~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D 82 (100)
T 3k6f_A 7 PILIPENQRQPFPRDVGKVVDSDRPE----GSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDRETIATYQLYVETTD 82 (100)
T ss_dssp CEEEETTCCSSSCEEEEECEETTCCT----TCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEC
T ss_pred cEEEeCCCCCCCCcEEEEEEEEcCCC----CEEEEEeCCCCCCCcCCEEEEECCCCEEEECcccCCcCCCEEEEEEEEEE
Confidence 4789999998 89999999999996 5899998631 12457899999999999999999999999999999999
Q ss_pred CCCCCCeEEEEEEEEEEe
Q psy11062 163 QGDPPMSSNLTVLLEVQD 180 (281)
Q Consensus 163 ~~~p~~~~~~~v~I~V~D 180 (281)
.|.|++++.+.|+|.|+|
T Consensus 83 ~g~p~l~~~~~v~I~V~D 100 (100)
T 3k6f_A 83 ASGKTLEGPVPLEVIVID 100 (100)
T ss_dssp TTCCEEEEEEEEEEEEEC
T ss_pred CCCCcccceEEEEEEEEC
Confidence 999999999999999987
No 42
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus}
Probab=99.74 E-value=1.2e-17 Score=123.65 Aligned_cols=90 Identities=18% Similarity=0.300 Sum_probs=80.8
Q ss_pred EEEEeCCCCCC--ceEEEEEEEeCCCCCCceEEEEEeeCC--CCCceeeEEeCceeEEEEceecCccCcceEEEEEEEEE
Q psy11062 87 RLSVPESAALG--LPLYTVVARDKDSGDNGKIRYHLASGN--FGDSRLFAVDQTSGHLSLSKHLDYETSQRHTIVVSATD 162 (281)
Q Consensus 87 ~~~v~En~~~g--t~v~~v~a~D~D~g~~~~i~y~l~~~~--~~~~~~F~id~~tG~i~~~~~LD~E~~~~y~l~V~a~D 162 (281)
.+.|+||.+.| +.+++|.|+|+|. .++|+|.+.. ......|.||+.+|.|++.++||||+...|.|.|+|+|
T Consensus 6 ~~~v~EN~~~g~~~~v~~V~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~A~D 81 (99)
T 3k6i_A 6 PILIPENQRPPFPRSVGKVIRSEGTE----GAKFRLSGKGVDQDPKGIFRINEISGDVSVTRPLDREAIANYELEVEVTD 81 (99)
T ss_dssp CEEEETTCCSSSCEEEEECEETTCCS----SEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEE
T ss_pred cEEEeCCCCCCCCeEEEEEEEEcCCC----eEEEEEeCCCCCCCcCCEEEEECCCcEEEECcccCCccCCEEEEEEEEEE
Confidence 46799999986 8899999999996 7999998631 12357899999999999999999999999999999999
Q ss_pred CCCCCCeEEEEEEEEEEe
Q psy11062 163 QGDPPMSSNLTVLLEVQD 180 (281)
Q Consensus 163 ~~~p~~~~~~~v~I~V~D 180 (281)
.|.|++++.+.|.|.|+|
T Consensus 82 ~g~~~l~~~~~v~I~V~D 99 (99)
T 3k6i_A 82 LSGKIIDGPVRLDISVID 99 (99)
T ss_dssp TTSCEEEEEEEEEEEEEC
T ss_pred CCCCceeeeEEEEEEEEC
Confidence 999999999999999987
No 43
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B
Probab=99.73 E-value=6.6e-18 Score=126.29 Aligned_cols=92 Identities=20% Similarity=0.369 Sum_probs=80.2
Q ss_pred EEEEeCCCC--CCceEEEEEEEeCCCCCCceEEEEEeeCCCC--CceeeEEeCceeEEEEceecCccCcceEEEEEEEEE
Q psy11062 87 RLSVPESAA--LGLPLYTVVARDKDSGDNGKIRYHLASGNFG--DSRLFAVDQTSGHLSLSKHLDYETSQRHTIVVSATD 162 (281)
Q Consensus 87 ~~~v~En~~--~gt~v~~v~a~D~D~g~~~~i~y~l~~~~~~--~~~~F~id~~tG~i~~~~~LD~E~~~~y~l~V~a~D 162 (281)
.+.|+||.+ .|+.++++.| | .|.|+.++|+|.+++.+ ....|.||+.+|.|++.++||||+...|.|+|+|+|
T Consensus 10 ~~~V~En~~~~~~~~v~~v~A-d--~g~N~~i~Ysi~~~~~~~~~~~~F~Id~~tG~I~~~~~LDrE~~~~y~l~V~A~D 86 (105)
T 2omz_B 10 PISCPENEKGPFPKNLVQIKS-N--KDKEGKVFYSITGQGADTPPVGVFIIERETGWLKVTEPLDRERIATYTLFSHAVS 86 (105)
T ss_dssp CCCEESSCCSSSSEEEEECEE-G--GGGSSCCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEC
T ss_pred CEEEeCCCCCCCCcEEEEEEC-C--CCCCCeEEEEEeCCCCCCCccCEEEEeCCCCEEEECccCCcCCCCeEEEEEEEEE
Confidence 467999998 5789999999 3 35699999999985421 146899999999999999999999999999999999
Q ss_pred CCCCCCeEEEEEEEEEEeC
Q psy11062 163 QGDPPMSSNLTVLLEVQDV 181 (281)
Q Consensus 163 ~~~p~~~~~~~v~I~V~Dv 181 (281)
.|.|++++++.|+|.|+|+
T Consensus 87 ~g~p~~~~~~~v~I~V~Dv 105 (105)
T 2omz_B 87 SNGNAVEDPMEILITVTDQ 105 (105)
T ss_dssp TTSCBSSCCEEEEEEEEC-
T ss_pred CCCCceeeEEEEEEEEEeC
Confidence 9999999999999999996
No 44
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A
Probab=99.67 E-value=5.9e-17 Score=122.17 Aligned_cols=78 Identities=24% Similarity=0.417 Sum_probs=60.5
Q ss_pred EEecCCCcEEEEEEeC----CCCceEEEECCccEEEECcCCCceeccEEEEEEEEEeC-CCCceeEEEEEEEEEecCCCC
Q psy11062 4 LLLDQSNPIRYTIHSG----DPEGYFTLDSTTGVIRTAATLDHEVTGVLLLSVQASSG-SPPLYSYAQVKVTIEDRNDNA 78 (281)
Q Consensus 4 ~d~d~~~~l~Y~i~~g----~~~~~F~Id~~~G~i~~~~~LD~E~~~~~~l~v~a~dg-~~~~~~~~~v~i~V~dvNd~~ 78 (281)
.|.|.|+.|+|+|.++ +..++|+|++.+|.|+++++||||+.+.|.|.|.|+|+ .+++++++.|.|.|.|+|||+
T Consensus 28 ~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D~g~p~~~~~~~v~I~V~DvNDn~ 107 (110)
T 1ncg_A 28 SGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAVDINGNQVENPIDIVINVIDMNDNR 107 (110)
T ss_dssp CGGGGGSCCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEECTTSCBCSCCEEEEEEEC------
T ss_pred CCCCCCCEEEEEEeCCCCCCCcCCEEEEECCCCEEEECCcCCcccCCeEEEEEEEEECCCCceeeEEEEEEEEEECCCCC
Confidence 3556788999999863 45689999999999999999999999999999999974 556788999999999999999
Q ss_pred Cee
Q psy11062 79 PEF 81 (281)
Q Consensus 79 P~f 81 (281)
|.|
T Consensus 108 P~F 110 (110)
T 1ncg_A 108 PEF 110 (110)
T ss_dssp ---
T ss_pred CCC
Confidence 987
No 45
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.66 E-value=1.2e-16 Score=122.88 Aligned_cols=76 Identities=26% Similarity=0.397 Sum_probs=68.2
Q ss_pred CCCcEEEEEEeC----CCCceEEEECCccEEEECcCCCceeccEEEEEEEEEeC-CCCceeEEEEEEEEEecCCCCCeec
Q psy11062 8 QSNPIRYTIHSG----DPEGYFTLDSTTGVIRTAATLDHEVTGVLLLSVQASSG-SPPLYSYAQVKVTIEDRNDNAPEFE 82 (281)
Q Consensus 8 ~~~~l~Y~i~~g----~~~~~F~Id~~~G~i~~~~~LD~E~~~~~~l~v~a~dg-~~~~~~~~~v~i~V~dvNd~~P~f~ 82 (281)
.|+.|+|+|.++ +..++|.|++.+|.|+++++||||+.+.|.|.|.|+|+ .+++++++.|.|.|.|+|||+|.|.
T Consensus 42 ~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D~g~p~~~~~~~v~I~V~DvNDn~P~F~ 121 (123)
T 2yqg_A 42 RGLKITYKYTGKGITEPPFGIFVFNKDTGELNVTSILDREETPFFLLTGYALDARGNNVEKPLELRIKVLDINDNEPVFT 121 (123)
T ss_dssp HTCCCEEEEEEBTTTBSSCSSEEEETTTTEEEECSCCBTTTBSEEEEEEEEECTTCCEEEEEECCEEEEECTTCCCCCCC
T ss_pred CCceEEEEEecCCCCCCcCCCEEEeCCcCEEEECcccCcccCceEEEEEEEEECCCCceEEEEEEEEEEEEcCCCCCEeC
Confidence 467999999875 34579999999999999999999999999999999974 5567889999999999999999997
Q ss_pred c
Q psy11062 83 S 83 (281)
Q Consensus 83 ~ 83 (281)
+
T Consensus 122 ~ 122 (123)
T 2yqg_A 122 Q 122 (123)
T ss_dssp C
T ss_pred C
Confidence 5
No 46
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.60 E-value=5.3e-16 Score=118.58 Aligned_cols=79 Identities=30% Similarity=0.471 Sum_probs=68.8
Q ss_pred CEEEEecC--CCcEEEEEEeCCC--CceEEEECCccEEEECcCCCceeccEEEEEEEEEe-CCCCceeEEEEEEEEEecC
Q psy11062 1 MKILLLDQ--SNPIRYTIHSGDP--EGYFTLDSTTGVIRTAATLDHEVTGVLLLSVQASS-GSPPLYSYAQVKVTIEDRN 75 (281)
Q Consensus 1 ~~~~d~d~--~~~l~Y~i~~g~~--~~~F~Id~~~G~i~~~~~LD~E~~~~~~l~v~a~d-g~~~~~~~~~v~i~V~dvN 75 (281)
++|+|.|. |+.|+|+|.++.. .++|.|++.+|.|+++++||||....|.|.|.|+| |.+++++++.|+|.|.|+|
T Consensus 36 v~A~D~D~g~n~~i~Y~i~~~~~~~~~~F~Id~~tG~I~~~~~LD~E~~~~y~l~V~A~D~g~p~~s~~~~v~I~V~DvN 115 (119)
T 2yst_A 36 LRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWLSVLHRIDREEVNQLRFTVMARDRGQPPKTDKATVVLNIKDEN 115 (119)
T ss_dssp CCCCCSSSSCCSCCCCEECSCCTTHHHHEEECTTTCEEEECSCCCTTTCSEEEEEEEECCSBTTBCCEEEEEEEEEECST
T ss_pred EEEEeCCCCCCCeEEEEEecCCCccccEEEEeCCceEEEECccCCcccCCEEEEEEEEEECCCCCcEEEEEEEEEEEecc
Confidence 35666664 6899999987553 36899999999999999999999999999999996 4566789999999999999
Q ss_pred CCCC
Q psy11062 76 DNAP 79 (281)
Q Consensus 76 d~~P 79 (281)
||+|
T Consensus 116 Dn~P 119 (119)
T 2yst_A 116 DNVP 119 (119)
T ss_dssp TCCC
T ss_pred CCCC
Confidence 9998
No 47
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}
Probab=99.57 E-value=1.1e-16 Score=123.40 Aligned_cols=75 Identities=27% Similarity=0.343 Sum_probs=67.2
Q ss_pred EEEEEeCCCCceEEEECCccEEEECcCCCceec----cEEEEEEEEEeCCCCceeEEEEEEEEEecCCCCCeeccCcEEE
Q psy11062 13 RYTIHSGDPEGYFTLDSTTGVIRTAATLDHEVT----GVLLLSVQASSGSPPLYSYAQVKVTIEDRNDNAPEFESTTIRL 88 (281)
Q Consensus 13 ~Y~i~~g~~~~~F~Id~~~G~i~~~~~LD~E~~----~~~~l~v~a~dg~~~~~~~~~v~i~V~dvNd~~P~f~~~~~~~ 88 (281)
.|+|++++..++|.||+.+|.|+++++||||+. ..|.|.|.|.++.| . ..+.|.|.|.|+|||+|.|.+..|.+
T Consensus 45 ~Y~i~~~~~~~~F~Id~~tG~i~~~~~LDRE~~c~~~~~y~l~v~a~~~~p-~-~~~~V~I~V~DvNDN~P~F~~~~y~v 122 (125)
T 1wyj_A 45 GAQILSKGNKQLLQLEQKSGNLLLKEKLDREELCGSTNPCILHFQVLLKSP-V-QFIQGEIQLQDVNDHAPEFMEDESGP 122 (125)
T ss_dssp TCEEECSSSSCSEEECSSSSEEEESSCCCSTTTCTTCSSCCBCCEEEETTT-T-EEECCCEEECCCCCCCCCCCCCCCCC
T ss_pred EEEEecCCCCCeEEEECCccEEEECccccchhhcccCCcEEEEEEEEECCC-C-eEEEEEEEEEEccCCCCcCCCcEEEE
Confidence 899998777789999999999999999999999 89999999997654 3 57899999999999999999988765
Q ss_pred E
Q psy11062 89 S 89 (281)
Q Consensus 89 ~ 89 (281)
+
T Consensus 123 s 123 (125)
T 1wyj_A 123 S 123 (125)
T ss_dssp C
T ss_pred e
Confidence 3
No 48
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus}
Probab=99.52 E-value=1.6e-15 Score=112.84 Aligned_cols=95 Identities=26% Similarity=0.350 Sum_probs=74.6
Q ss_pred CcEEEEEeCCCCCCceEEEEEEEeCCCCCC--ceEEEEEeeCCCCCceeeEEeCceeEEEEceecCccCc----ceEEEE
Q psy11062 84 TTIRLSVPESAALGLPLYTVVARDKDSGDN--GKIRYHLASGNFGDSRLFAVDQTSGHLSLSKHLDYETS----QRHTIV 157 (281)
Q Consensus 84 ~~~~~~v~En~~~gt~v~~v~a~D~D~g~~--~~i~y~l~~~~~~~~~~F~id~~tG~i~~~~~LD~E~~----~~y~l~ 157 (281)
..+.++|+|+.++|+.|+.+ |.|+|.+.+ ..++|+|..++ ...+|.||+.+|.|++.++||||.. ..|.+.
T Consensus 3 ~~~~~~V~E~~~~Gt~Vg~v-a~D~~~~~~~~~~~~y~i~~~~--~~~~F~Id~~tG~i~~~~~LDRE~~~~~~~~~~~~ 79 (103)
T 1wuz_A 3 SQIHYSIPEEAKHGTFVGRI-AQDLGLELTELVPRLFRVASKD--RGDLLEVNLQNGILFVNSRIDREELCGRSAECSIH 79 (103)
T ss_dssp CEEEEEEESSCCTTCBCCCH-HHHHTCCHHHHTTTTBCCBCSS--CSCSEEEETTTTEEEECSCCSHHHHCSSSSSCEEE
T ss_pred eeEEEEEECCCCCCCEEEEE-EeccCCCCcccccEEEEEEeCC--CccEEEEECCeEEEEECCcCccccccCCCCcEEEE
Confidence 35678999999999999999 999886432 35789998653 4679999999999999999999975 234444
Q ss_pred EEEEECCCCCCeEEEEEEEEEEeCCCC
Q psy11062 158 VSATDQGDPPMSSNLTVLLEVQDVNDN 184 (281)
Q Consensus 158 V~a~D~~~p~~~~~~~v~I~V~DvND~ 184 (281)
++|... .| . ..+.|.|.|+|+|||
T Consensus 80 ~~v~~~-~p-~-~~~~v~I~V~DiNDN 103 (103)
T 1wuz_A 80 LEVIVD-RP-L-QVFHVEVEVRDINDN 103 (103)
T ss_dssp EEEEET-TT-T-EEEEEEEEEECCSCC
T ss_pred EEEEEC-CC-C-EEEEEEEEEEEcCCC
Confidence 444443 33 3 478999999999997
No 49
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus}
Probab=99.45 E-value=2.1e-13 Score=100.59 Aligned_cols=70 Identities=27% Similarity=0.373 Sum_probs=61.5
Q ss_pred EEecC-CCcEEEEEEeCCCCceEEEECCccEEEECcCCCceeccEEEEEEEEEeCC--CCceeEEEEEEEEEe
Q psy11062 4 LLLDQ-SNPIRYTIHSGDPEGYFTLDSTTGVIRTAATLDHEVTGVLLLSVQASSGS--PPLYSYAQVKVTIED 73 (281)
Q Consensus 4 ~d~d~-~~~l~Y~i~~g~~~~~F~Id~~~G~i~~~~~LD~E~~~~~~l~v~a~dg~--~~~~~~~~v~i~V~d 73 (281)
+|.|. |++|.|+|.++...+.|.||+.+|.|++.++||||+.+.|.|+|.|+|+. +++++++.|.|.|.|
T Consensus 27 ~D~D~gNg~v~Ysi~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D~G~~p~l~~~~~v~I~V~D 99 (99)
T 1zvn_A 27 SDMDRGDGSIKYILSGEGAGIVFTIDDTTGDIHAIQRLDREERSQYTLRAQALDRRTGRPMEPESEFIIKIQD 99 (99)
T ss_dssp BTTCCSSSCEEEEEEETTBTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTTCCBSSCCEEEEEEEEC
T ss_pred ECCCCCCCEEEEEEeCCCCCceEEEeCCCCCEEECeecCCccCCeEEEEEEEEECCCCCCcceeEEEEEEEeC
Confidence 44454 78999999876666789999999999999999999999999999999753 678899999999986
No 50
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B
Probab=99.45 E-value=2e-13 Score=101.85 Aligned_cols=72 Identities=22% Similarity=0.331 Sum_probs=62.3
Q ss_pred EEEEecCCCcEEEEEEeCCC----CceEEEECCccEEEECcCCCceeccEEEEEEEEEe-CCCCceeEEEEEEEEEec
Q psy11062 2 KILLLDQSNPIRYTIHSGDP----EGYFTLDSTTGVIRTAATLDHEVTGVLLLSVQASS-GSPPLYSYAQVKVTIEDR 74 (281)
Q Consensus 2 ~~~d~d~~~~l~Y~i~~g~~----~~~F~Id~~~G~i~~~~~LD~E~~~~~~l~v~a~d-g~~~~~~~~~v~i~V~dv 74 (281)
+| |.+.|+.|+|+|.+++. .++|.||+.+|.|++.++||||+...|.|+|.|+| |.+++++++.|.|.|.|+
T Consensus 29 ~A-d~g~N~~i~Ysi~~~~~~~~~~~~F~Id~~tG~I~~~~~LDrE~~~~y~l~V~A~D~g~p~~~~~~~v~I~V~Dv 105 (105)
T 2omz_B 29 KS-NKDKEGKVFYSITGQGADTPPVGVFIIERETGWLKVTEPLDRERIATYTLFSHAVSSNGNAVEDPMEILITVTDQ 105 (105)
T ss_dssp EE-GGGGSSCCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEECTTSCBSSCCEEEEEEEEC-
T ss_pred EC-CCCCCCeEEEEEeCCCCCCCccCEEEEeCCCCEEEECccCCcCCCCeEEEEEEEEECCCCceeeEEEEEEEEEeC
Confidence 44 56789999999987543 46899999999999999999999999999999996 556778899999999985
No 51
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A
Probab=99.40 E-value=7e-13 Score=97.54 Aligned_cols=70 Identities=26% Similarity=0.358 Sum_probs=59.0
Q ss_pred EEecC-CCcEEEEEEeCCCCceEEEECCccEEEECcCCCceeccEEEEEEEEEeCC--CCceeEEEEEEEEEe
Q psy11062 4 LLLDQ-SNPIRYTIHSGDPEGYFTLDSTTGVIRTAATLDHEVTGVLLLSVQASSGS--PPLYSYAQVKVTIED 73 (281)
Q Consensus 4 ~d~d~-~~~l~Y~i~~g~~~~~F~Id~~~G~i~~~~~LD~E~~~~~~l~v~a~dg~--~~~~~~~~v~i~V~d 73 (281)
+|.|. |+.|+|+|.++...++|+||+.+|.|++.++||||+.+.|.|+|.|+|+. +++++++.|.|.|.|
T Consensus 26 ~D~D~gN~~v~Ysi~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~A~D~g~~~~l~~~~~v~I~V~D 98 (98)
T 1zxk_A 26 TDLDPGSKKIKYILSGDGAGTIFQINDITGDIHAIKRLDREEKAEYTLTAQAVDFETNKPLEPPSEFIIKVQD 98 (98)
T ss_dssp BCCCCC--CEEEEEEETTBTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTTCCBSSCCEEEEEEECC
T ss_pred ECCCCCCCEEEEEEeCCCCCCEEEEECCccEEEECccCCCcCCCeEEEEEEEEECCCCCCcceeEEEEEEEEC
Confidence 44454 68999999876555689999999999999999999999999999999754 568889999999976
No 52
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.40 E-value=1.6e-13 Score=103.91 Aligned_cols=74 Identities=31% Similarity=0.433 Sum_probs=62.5
Q ss_pred CEEEEecC--CCcEEEEEEeC---CCCceEEEECCccEEEECcCCCceeccEEEEEEEEEeCCCCceeEEEEEEEEEecC
Q psy11062 1 MKILLLDQ--SNPIRYTIHSG---DPEGYFTLDSTTGVIRTAATLDHEVTGVLLLSVQASSGSPPLYSYAQVKVTIEDRN 75 (281)
Q Consensus 1 ~~~~d~d~--~~~l~Y~i~~g---~~~~~F~Id~~~G~i~~~~~LD~E~~~~~~l~v~a~dg~~~~~~~~~v~i~V~dvN 75 (281)
++|+|.|. |+.|+|+|.++ +..++|+|++.+|.|+++++||||....|.|.|.|+|+..+. ++++|+|.|.|+|
T Consensus 36 v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~F~Id~~tG~I~~~~~LD~E~~~~y~l~V~A~D~g~~~-~~~~v~I~V~DvN 114 (114)
T 2ee0_A 36 LHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTP-ARATVTINVTDVN 114 (114)
T ss_dssp CCCCSCSSCCCSCCEEEECSSCCHHHHHHEEECTTTCEEEECSCCCTTTCSEEEEEEEEESSSSSC-EEEEEEEEEECCC
T ss_pred EEEEeCCCCCCcEEEEEEccCCCCCccceEEEeCCeeEEEECccCCcccCcEEEEEEEEEECCCCc-eEEEEEEEEEECC
Confidence 35666664 78999999753 345789999999999999999999999999999999765433 7889999999998
No 53
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus}
Probab=99.38 E-value=1.1e-12 Score=96.63 Aligned_cols=72 Identities=17% Similarity=0.363 Sum_probs=60.6
Q ss_pred EEEEecCCCcEEEEEEe----CCCCceEEEECCccEEEECcCCCceeccEEEEEEEEEeC-CCCceeEEEEEEEEEe
Q psy11062 2 KILLLDQSNPIRYTIHS----GDPEGYFTLDSTTGVIRTAATLDHEVTGVLLLSVQASSG-SPPLYSYAQVKVTIED 73 (281)
Q Consensus 2 ~~~d~d~~~~l~Y~i~~----g~~~~~F~Id~~~G~i~~~~~LD~E~~~~~~l~v~a~dg-~~~~~~~~~v~i~V~d 73 (281)
++.++|.+..|+|+|.+ +++.+.|.||+.+|.|++.++||||+...|.|.|.|+|+ .+++++++.|.|.|.|
T Consensus 23 ~V~A~D~D~~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~A~D~g~~~l~~~~~v~I~V~D 99 (99)
T 3k6i_A 23 KVIRSEGTEGAKFRLSGKGVDQDPKGIFRINEISGDVSVTRPLDREAIANYELEVEVTDLSGKIIDGPVRLDISVID 99 (99)
T ss_dssp ECEETTCCSSEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEETTSCEEEEEEEEEEEEEC
T ss_pred EEEEEcCCCeEEEEEeCCCCCCCcCCEEEEECCCcEEEECcccCCccCCEEEEEEEEEECCCCceeeeEEEEEEEEC
Confidence 34455555599999975 344579999999999999999999999999999999964 5567889999999987
No 54
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus}
Probab=99.37 E-value=1.5e-12 Score=96.09 Aligned_cols=72 Identities=24% Similarity=0.421 Sum_probs=60.9
Q ss_pred EEEEecCCCcEEEEEEe----CCCCceEEEECCccEEEECcCCCceeccEEEEEEEEEeC-CCCceeEEEEEEEEEe
Q psy11062 2 KILLLDQSNPIRYTIHS----GDPEGYFTLDSTTGVIRTAATLDHEVTGVLLLSVQASSG-SPPLYSYAQVKVTIED 73 (281)
Q Consensus 2 ~~~d~d~~~~l~Y~i~~----g~~~~~F~Id~~~G~i~~~~~LD~E~~~~~~l~v~a~dg-~~~~~~~~~v~i~V~d 73 (281)
++.++|.+..++|+|.+ +++.+.|.||+.+|.|++.++||||+...|.|.|.|.|+ .+++++++.|.|.|.|
T Consensus 24 ~V~A~D~D~~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D~g~p~l~~~~~v~I~V~D 100 (100)
T 3k6f_A 24 KVVDSDRPEGSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDRETIATYQLYVETTDASGKTLEGPVPLEVIVID 100 (100)
T ss_dssp ECEETTCCTTCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEECTTCCEEEEEEEEEEEEEC
T ss_pred EEEEEcCCCCEEEEEeCCCCCCCcCCEEEEECCCCEEEECcccCCcCCCEEEEEEEEEECCCCcccceEEEEEEEEC
Confidence 34456665699999975 345589999999999999999999999999999999964 5667889999999987
No 55
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A
Probab=99.36 E-value=1.3e-12 Score=96.38 Aligned_cols=71 Identities=15% Similarity=0.351 Sum_probs=60.4
Q ss_pred EEEecCCCcEEEEEEe----CCCCceEEEECCccEEEECcCCCceeccEEEEEEEEEeC-CCCceeEEEEEEEEEe
Q psy11062 3 ILLLDQSNPIRYTIHS----GDPEGYFTLDSTTGVIRTAATLDHEVTGVLLLSVQASSG-SPPLYSYAQVKVTIED 73 (281)
Q Consensus 3 ~~d~d~~~~l~Y~i~~----g~~~~~F~Id~~~G~i~~~~~LD~E~~~~~~l~v~a~dg-~~~~~~~~~v~i~V~d 73 (281)
+.++|.+..++|+|.+ +++.+.|.||+.+|.|++.++||||+...|.|.|.|+|+ .+++++++.|.|.|.|
T Consensus 24 v~A~D~D~~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D~g~~~l~~~~~v~I~V~D 99 (99)
T 3k6d_A 24 VVVSDRIPGSKIKLYGKGVDQEPKGIFKINENSGEVSVTKALDREAIPSYQLQVETTDENGKTIEGPVDLEILVID 99 (99)
T ss_dssp CBCSSCCTTCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEECTTCCEEEEEEEEEEEEEC
T ss_pred EEEECCCCcEEEEEecCcCCCCCCCEEEEECCceEEEECcCCCcccCceEEEEEEEEECCCCceeeEEEEEEEEEC
Confidence 4455666699999974 445689999999999999999999999999999999975 4567788999999986
No 56
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus}
Probab=99.09 E-value=2.4e-11 Score=90.15 Aligned_cols=65 Identities=20% Similarity=0.320 Sum_probs=52.1
Q ss_pred cEEEEEEeCCCCceEEEECCccEEEECcCCCceecc----EEEEEEEEEeCCCCceeEEEEEEEEEecCCC
Q psy11062 11 PIRYTIHSGDPEGYFTLDSTTGVIRTAATLDHEVTG----VLLLSVQASSGSPPLYSYAQVKVTIEDRNDN 77 (281)
Q Consensus 11 ~l~Y~i~~g~~~~~F~Id~~~G~i~~~~~LD~E~~~----~~~l~v~a~dg~~~~~~~~~v~i~V~dvNd~ 77 (281)
.+.|+|.+++...+|.||+.+|.|+++++||||+.+ .+.+.+.+..+.|. ..+.|.|.|.|+|||
T Consensus 35 ~~~y~i~~~~~~~~F~Id~~tG~i~~~~~LDRE~~~~~~~~~~~~~~v~~~~p~--~~~~v~I~V~DiNDN 103 (103)
T 1wuz_A 35 PRLFRVASKDRGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLEVIVDRPL--QVFHVEVEVRDINDN 103 (103)
T ss_dssp TTTBCCBCSSCSCSEEEETTTTEEEECSCCSHHHHCSSSSSCEEEEEEEETTTT--EEEEEEEEEECCSCC
T ss_pred cEEEEEEeCCCccEEEEECCeEEEEECCcCccccccCCCCcEEEEEEEEECCCC--EEEEEEEEEEEcCCC
Confidence 589999988778899999999999999999999974 33444444434443 478999999999997
No 57
>2yhg_A SDE_182CT, cellulose-binding protein; hydrolase, glycoside hydrolase; HET: BTB; 1.08A {Saccharophagus degradans}
Probab=92.78 E-value=0.51 Score=42.96 Aligned_cols=69 Identities=16% Similarity=0.255 Sum_probs=47.5
Q ss_pred EeCCCCCCceEEEEEeeCCCC--CceeeEEe-CceeEEEEceecCccCcceEEEEEEEEECCCCCCeEEEEEEEEE
Q psy11062 106 RDKDSGDNGKIRYHLASGNFG--DSRLFAVD-QTSGHLSLSKHLDYETSQRHTIVVSATDQGDPPMSSNLTVLLEV 178 (281)
Q Consensus 106 ~D~D~g~~~~i~y~l~~~~~~--~~~~F~id-~~tG~i~~~~~LD~E~~~~y~l~V~a~D~~~p~~~~~~~v~I~V 178 (281)
+|+| +..++|+...-... ......+. ..+..+...-+-+ +....|.|.++|+|.+.|..++...|.|+|
T Consensus 365 sDPD---GD~LtY~W~q~~g~g~~~~~vtls~~~~~~~sft~P~~-~~~~tl~f~LtVTD~~~p~lTs~~rViVtV 436 (437)
T 2yhg_A 365 SDPD---GDSLNYSWSHYGEADSYSGSVSISNSSSASANVQIPSN-AGGKDIHILLTLRDNGSPNLYAYRRVVINV 436 (437)
T ss_dssp BCTT---CCCEEEEEEECTTTSSCCSCCCEETTTSSEEEEECCTT-CTTCEEEEEEEEEECSSSCCEEEEEEEEEE
T ss_pred eCCC---CCeEEEEEEEeCCCCccccceEeecCCCceEEEEeCCC-CCCcEEEEEEEEEeCCCCCccEEeEEEEEe
Confidence 4888 55688888753211 11245553 3445666655544 457889999999999988899998888887
No 58
>1op4_A Neural-cadherin; beta sandwich, cadherin-like domain, cell adhesion; NMR {Mus musculus} SCOP: b.1.6.1
Probab=90.35 E-value=1.9 Score=33.62 Aligned_cols=81 Identities=19% Similarity=0.297 Sum_probs=59.0
Q ss_pred CCCCeeccCcEEEEEeCCCCCCceEEEEEEEeCCCCCCceEEEEEeeCCCCCceeeEEeCceeEEEEceecCccCcceEE
Q psy11062 76 DNAPEFESTTIRLSVPESAALGLPLYTVVARDKDSGDNGKIRYHLASGNFGDSRLFAVDQTSGHLSLSKHLDYETSQRHT 155 (281)
Q Consensus 76 d~~P~f~~~~~~~~v~En~~~gt~v~~v~a~D~D~g~~~~i~y~l~~~~~~~~~~F~id~~tG~i~~~~~LD~E~~~~y~ 155 (281)
.+.|-|.+..|...++-+...|..+++|.-.|=. .+..+.|.-.. ..-|.|++ .|.|++.+++..-... -.
T Consensus 31 ~C~pGF~~~~~~~~vp~~l~~g~~lgkV~F~dC~--g~~~~~~~ssD-----p~dFkV~~-DGtVya~r~v~L~~~~-~~ 101 (159)
T 1op4_A 31 LCKTGFPEDVYSAVLPKDVHEGQPLLNVKFSNCN--RKRKVQYESSE-----PADFKVDE-DGTVYAVRSFPLTAEQ-AK 101 (159)
T ss_dssp CCCCBCCSCEEEECCCCSSCSSCCEEECCCBCCS--SCCCEEEECCC-----SSEEEEET-TTEEEEESCCSCSSSC-EE
T ss_pred cccCCcCcceeEEeccccccCCceeceeecccCC--CCCceeEEcCC-----CCCeEEeC-CCcEEEecceeecCCC-cE
Confidence 4579999999977788888899999988766654 34456665543 22699985 5999999987543322 38
Q ss_pred EEEEEEECCC
Q psy11062 156 IVVSATDQGD 165 (281)
Q Consensus 156 l~V~a~D~~~ 165 (281)
|.|.|.|...
T Consensus 102 F~V~a~D~~t 111 (159)
T 1op4_A 102 FLIYAQDKET 111 (159)
T ss_dssp EEEEEEETTT
T ss_pred EEEEEEcCCC
Confidence 8899999654
No 59
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=90.23 E-value=6 Score=31.54 Aligned_cols=117 Identities=19% Similarity=0.193 Sum_probs=62.0
Q ss_pred ccEEEEEEEEEeCCCCceeEEEEEEEEEecCCCCCeeccCcEEEEEeCCCC---CC-ceEEEEEEEeCCCCCCceEEEEE
Q psy11062 45 TGVLLLSVQASSGSPPLYSYAQVKVTIEDRNDNAPEFESTTIRLSVPESAA---LG-LPLYTVVARDKDSGDNGKIRYHL 120 (281)
Q Consensus 45 ~~~~~l~v~a~dg~~~~~~~~~v~i~V~dvNd~~P~f~~~~~~~~v~En~~---~g-t~v~~v~a~D~D~g~~~~i~y~l 120 (281)
...|.|.++|.|..+.......+.|.|.+ ..+|... +.-+.+.. .| ..-....|.|.|.+ =.++.|.+
T Consensus 60 ~G~htlta~A~D~aGn~s~s~~v~vtV~~--~~~Ptv~-----itsP~~g~~~~~~~~vtl~~~AsD~~g~-V~~Ve~~~ 131 (190)
T 3pdd_A 60 VGAYNLKAVAVLSDGRRIESPVTPVLVKV--IVKPTVK-----LTAPKSNVVAYGNEFLKITATASDSDGK-ISRVDFLV 131 (190)
T ss_dssp SEEEEEEEEEEETTSCEEECCCEEEEEEC--CCCCEEE-----EEECCTTCCCBTTSEEEEEEEEECSSSC-EEEEEEEE
T ss_pred CccEEEEEEEEECCCCEeeecceeEEecc--CCCCcee-----ecCCCCCcEEecCCeEEEEEEEECCCCc-EEEEEEEE
Confidence 45899999999866544333457777766 4467642 33344422 23 34456677776621 12344444
Q ss_pred eeCCCCCceeeEEeCceeEEEEceecCccCcceEEEEEEEEECCCCCCeEEEEEEEEEEe
Q psy11062 121 ASGNFGDSRLFAVDQTSGHLSLSKHLDYETSQRHTIVVSATDQGDPPMSSNLTVLLEVQD 180 (281)
Q Consensus 121 ~~~~~~~~~~F~id~~tG~i~~~~~LD~E~~~~y~l~V~a~D~~~p~~~~~~~v~I~V~D 180 (281)
.+ ....-+.... ....... ..+.|.|+++|+|..+.. +....|+|.|.+
T Consensus 132 dg------~~v~t~t~~~-y~~~~~~---~~G~~tl~a~A~D~aGn~-s~s~~vtvtv~~ 180 (190)
T 3pdd_A 132 DG------EVIGSDREAP-YEYEWKA---VEGNHEISVIAYDDDDAA-STPDSVKIFVKQ 180 (190)
T ss_dssp TT------EEEEEECSSS-EEEEEEC---CSEEEEEEEEEEETTCCB-CCCEEEEEEEBC
T ss_pred CC------EEEecccCCC-EEEEEec---CCeeEEEEEEEEECCCCE-EecceEEEEECC
Confidence 32 1121121111 1111111 567899999999987642 234455555543
No 60
>3rb5_A Na/Ca exchange protein; CBD12, calcium binding and regulation, metal binding protein; 2.35A {Drosophila melanogaster} PDB: 3rb7_A 3e9u_A
Probab=89.49 E-value=9.5 Score=32.78 Aligned_cols=127 Identities=16% Similarity=0.213 Sum_probs=64.2
Q ss_pred CCCCCeeccCcEEEEEeCCCCCCceEEEEEEEeCCCCCCceEEEEEeeCCCCCceeeEEeCceeEEEEc-----e-----
Q psy11062 75 NDNAPEFESTTIRLSVPESAALGLPLYTVVARDKDSGDNGKIRYHLASGNFGDSRLFAVDQTSGHLSLS-----K----- 144 (281)
Q Consensus 75 Nd~~P~f~~~~~~~~v~En~~~gt~v~~v~a~D~D~g~~~~i~y~l~~~~~~~~~~F~id~~tG~i~~~-----~----- 144 (281)
+|++..|....-...|.|+. |+....|.-+. +......+.|....|......-|. +.+|.|... +
T Consensus 6 dd~~g~i~F~~~~y~V~E~~--g~v~vtV~R~g-~~~~~vtV~y~T~~GTA~ag~Dy~--~~~gtl~F~~Get~kti~V~ 80 (298)
T 3rb5_A 6 ADDPIRMYFEPGHYTVMENC--GEFEVRVVRRG-DISTYASVEYETQDGTASAGTDFV--GRKGLLSFPPGVDEQRFRIE 80 (298)
T ss_dssp -----CEEESSSEEEEETTS--CCEECCEEECS-CCSSCEEEEEEEEESSSCBTTTBC--CCEEEEEECTTCCEECCEEC
T ss_pred CCCceEEEEeCCEEEEecCc--eEEEEEEEEEC-CCCccEEEEEEeeCCccCCCCCcc--ccceEEEECCCceEEEEEEE
Confidence 45666666555567799985 56555554433 444455788887765432221221 123443332 1
Q ss_pred ec---CccCcceEEEEEEEEECC-CCCCeEEEEEEEEEEeCCCCCCeeeCCceEEEEeCCCCCCcEEEEEE
Q psy11062 145 HL---DYETSQRHTIVVSATDQG-DPPMSSNLTVLLEVQDVNDNPPVFERSEYFVSVSEALPAKSQVRTTC 211 (281)
Q Consensus 145 ~L---D~E~~~~y~l~V~a~D~~-~p~~~~~~~v~I~V~DvND~~P~f~~~~y~~~v~E~~~~gt~v~~v~ 211 (281)
-+ -+|....|.+.+ ++.. +.........+|.|.| ||++|.|.-..-...|.|+. |...++|.
T Consensus 81 I~dD~~~E~dEtF~v~L--s~p~~~a~lg~~~~atvtI~d-dD~~g~~~f~~~~~~V~E~~--g~~~~~V~ 146 (298)
T 3rb5_A 81 VIDDDVFEEDECFYIRL--FNPSEGVKLAVPMIATVMILD-DDHAGIFAFTDSVFEITESV--GRFELKVM 146 (298)
T ss_dssp BCCCSSCCCCEEEEEEE--ECCCTTCCBCSCSEEEEEEEC-CCCCCEEECSCSEEEECTTC--CCEEEEEE
T ss_pred EeCCCCccCcEEEEEEE--eCCCCCcEECCCceEEEEEec-cccccccccccccEEeecCC--ceEEEEEE
Confidence 11 234445555544 4431 1122222345566677 57789876554467888985 55555554
No 61
>2kpn_A Bacillolysin; solution structure, BIG_3 domain, PF07523, PSI BIG-open NESG, cell WALL, hydrolase, peptidoglycan-anchor; NMR {Bacillus cereus atcc 14579}
Probab=82.39 E-value=3 Score=29.93 Aligned_cols=45 Identities=9% Similarity=0.053 Sum_probs=35.1
Q ss_pred EEceecCccCcceEEEEEEEEECCCCCCeEEEEEEEEEEeCCCCCCe
Q psy11062 141 SLSKHLDYETSQRHTIVVSATDQGDPPMSSNLTVLLEVQDVNDNPPV 187 (281)
Q Consensus 141 ~~~~~LD~E~~~~y~l~V~a~D~~~p~~~~~~~v~I~V~DvND~~P~ 187 (281)
.+.+..|..+.+.|.++..++|..+ ..++++.+|.|.+..+..|.
T Consensus 48 ~V~g~Vdt~k~G~Y~VtY~VtDs~G--n~~t~trtVtV~~~~e~~~~ 92 (103)
T 2kpn_A 48 KVDGEVDTTKAGTYVLTYTVTDSKG--HEVTAKQTVTVKVREEVKND 92 (103)
T ss_dssp EEESCCCSSSCEEEEEEEEEECTTS--CEEEEEEEEEEECSSCCCCC
T ss_pred EEeCcccCCCceEEEEEEEEEcCCC--CEEEEEEEEEEeCCCcccCC
Confidence 3345678778899999999999877 57788888999887665443
No 62
>2yrl_A KIAA1837 protein; PKD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=81.74 E-value=3.5 Score=29.34 Aligned_cols=32 Identities=13% Similarity=0.202 Sum_probs=27.2
Q ss_pred CcceEEEEEEEEECCCCCCeEEEEEEEEEEeCCC
Q psy11062 150 TSQRHTIVVSATDQGDPPMSSNLTVLLEVQDVND 183 (281)
Q Consensus 150 ~~~~y~l~V~a~D~~~p~~~~~~~v~I~V~DvND 183 (281)
....|.|++.|+|..+ .+++..++|.|...++
T Consensus 67 ~~G~y~f~LTVtD~~G--~s~s~~v~VtV~~~~~ 98 (102)
T 2yrl_A 67 QVGTYVFTLTVKDERN--LQSQSSVNVIVKEESG 98 (102)
T ss_dssp CSSEEEEEEEEEBTTC--CEEEEEEEEEEECCSS
T ss_pred CCeEEEEEEEEEeCCC--CEEEeEEEEEEcCCCC
Confidence 5679999999999986 6888999999988655
No 63
>3ead_A Na/Ca exchange protein; CBD1, calcium regulation, membrane, transmembrane, membrane; 2.25A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=80.40 E-value=15 Score=27.51 Aligned_cols=45 Identities=20% Similarity=0.203 Sum_probs=25.2
Q ss_pred CCCeeccCcEEEEEeCCCCCCceEEEEEEEeCCCCCCceEEEEEeeCC
Q psy11062 77 NAPEFESTTIRLSVPESAALGLPLYTVVARDKDSGDNGKIRYHLASGN 124 (281)
Q Consensus 77 ~~P~f~~~~~~~~v~En~~~gt~v~~v~a~D~D~g~~~~i~y~l~~~~ 124 (281)
+.+.+....-...|.|+. |+....|.-.. +......+.|....|.
T Consensus 3 ~~~~i~F~~~~y~V~E~~--g~~~v~V~R~g-~~~~~v~V~y~t~~gT 47 (137)
T 3ead_A 3 DPIRMYFEPGHYTVMENC--GEFEVRVVRRG-DISTYASVEYETQDGT 47 (137)
T ss_dssp --CEEEESSCEEEEEGGG--CEEEEEEEEES-CCSSCEEEEEEEECSS
T ss_pred CCEEEEEcCCEEEEECCC--eEEEEEEEEEC-CCCceEEEEEEeECCC
Confidence 344444344466788875 55555555443 4334557888877654
No 64
>3gin_A Sodium/calcium exchanger 1; CBD1, CBD2, NCX, calcium binding domain 1, antiport, calcium transport, calmodulin-binding, cell membrane; 2.40A {Canis lupus familiaris} PDB: 2dpk_A* 2fws_A
Probab=71.55 E-value=23 Score=27.31 Aligned_cols=57 Identities=14% Similarity=0.173 Sum_probs=29.4
Q ss_pred EEEEEEEEecCCCCCeeccCcEEEEEeCCCCCCceEEEEEEEeCCCCCCceEEEEEeeCC
Q psy11062 65 AQVKVTIEDRNDNAPEFESTTIRLSVPESAALGLPLYTVVARDKDSGDNGKIRYHLASGN 124 (281)
Q Consensus 65 ~~v~i~V~dvNd~~P~f~~~~~~~~v~En~~~gt~v~~v~a~D~D~g~~~~i~y~l~~~~ 124 (281)
+.+.+.|.|-+ ..+.|.-..-...|.|+. |+.-..|.-+..+.+....+.|....|.
T Consensus 10 ~~~~~~i~ddd-~~g~i~F~~~~y~V~E~~--G~v~vtV~R~~G~~~~~v~V~y~T~dGT 66 (160)
T 3gin_A 10 AALEVLFQGPG-PVSKIFFEQGTYQCLENC--GTVALTIIRRGGDLTNTVFVDFRTEDGT 66 (160)
T ss_dssp ------------CEEEEEESCSEEEEETTS--SEEEEEEEEESSCTTSCEEEEEEEEESS
T ss_pred ceEEEEEecCC-CccEEEEeCCEEEEEcCc--EEEEEEEEEccCCCCcEEEEEEEEECCc
Confidence 34555556533 356665555567789985 6666666555555444557889887764
No 65
>3rb5_A Na/Ca exchange protein; CBD12, calcium binding and regulation, metal binding protein; 2.35A {Drosophila melanogaster} PDB: 3rb7_A 3e9u_A
Probab=71.12 E-value=48 Score=28.27 Aligned_cols=78 Identities=19% Similarity=0.139 Sum_probs=42.7
Q ss_pred ceeccEEEEEEEEEeCCCCceeEEEEEEEEEecCCCCCeeccCcEEEEEeCCCCCCceEEEEEEEeCCCCCCceEEEEEe
Q psy11062 42 HEVTGVLLLSVQASSGSPPLYSYAQVKVTIEDRNDNAPEFESTTIRLSVPESAALGLPLYTVVARDKDSGDNGKIRYHLA 121 (281)
Q Consensus 42 ~E~~~~~~l~v~a~dg~~~~~~~~~v~i~V~dvNd~~P~f~~~~~~~~v~En~~~gt~v~~v~a~D~D~g~~~~i~y~l~ 121 (281)
+|....|.+.+..-.+..........++.|.| ||++|.|....-...|.|+. |.....|.-+..-. ..-.+.|...
T Consensus 87 ~E~dEtF~v~Ls~p~~~a~lg~~~~atvtI~d-dD~~g~~~f~~~~~~V~E~~--g~~~~~V~Rs~~~~-g~vtV~~~T~ 162 (298)
T 3rb5_A 87 FEEDECFYIRLFNPSEGVKLAVPMIATVMILD-DDHAGIFAFTDSVFEITESV--GRFELKVMRYSGAR-GTVIVPYWTE 162 (298)
T ss_dssp CCCCEEEEEEEECCCTTCCBCSCSEEEEEEEC-CCCCCEEECSCSEEEECTTC--CCEEEEEEEESCCC-SCEEEEEEEE
T ss_pred ccCcEEEEEEEeCCCCCcEECCCceEEEEEec-cccccccccccccEEeecCC--ceEEEEEEEEecCC-CCEEEEEEec
Confidence 45555566655433222222222345555566 56688876555567788885 66666665544332 2335667665
Q ss_pred eC
Q psy11062 122 SG 123 (281)
Q Consensus 122 ~~ 123 (281)
.|
T Consensus 163 dG 164 (298)
T 3rb5_A 163 ND 164 (298)
T ss_dssp EC
T ss_pred CC
Confidence 54
No 66
>3us9_A Sodium/calcium exchanger 1; beta-sandwich, calcium binding protein, intracellular, metal protein; 2.68A {Canis lupus familiaris} PDB: 2klt_A
Probab=70.45 E-value=50 Score=28.16 Aligned_cols=118 Identities=17% Similarity=0.220 Sum_probs=60.0
Q ss_pred EEEEeCCCCCCceEEEEEEEeCCCCCCceEEEEEeeCCCCCceeeEEeCceeEEEEc----------eecC---ccCcce
Q psy11062 87 RLSVPESAALGLPLYTVVARDKDSGDNGKIRYHLASGNFGDSRLFAVDQTSGHLSLS----------KHLD---YETSQR 153 (281)
Q Consensus 87 ~~~v~En~~~gt~v~~v~a~D~D~g~~~~i~y~l~~~~~~~~~~F~id~~tG~i~~~----------~~LD---~E~~~~ 153 (281)
...|.|+. |+.-..|.-...+......+.|....|......-|. ..+|.|... .-+| +|....
T Consensus 18 ~y~V~E~~--G~v~vtV~R~gG~~~~~v~V~y~T~dGTA~~g~Dy~--~~~gtl~F~~Get~kti~V~IidD~~~E~~Et 93 (295)
T 3us9_A 18 TYQCLENC--GTVALTIIRRGGDLTNTVFVDFRTEDGTANAGSDYE--FTEGTVVFKPGETQKEIRVGIIDDDIFEEDKN 93 (295)
T ss_dssp EEEEEGGG--SCEEEEEEEEESSCCSCEEEEEEEEESSSCBTTTBC--CCCEEEEECSSCCEEEEEECCCCCSSCCCCEE
T ss_pred eEEEecCc--eEEEEEEEEecCCCCceEEEEEEeeCCcccCCcCcc--ccceEEEECCCceEEEEEEEEeCCCcccCceE
Confidence 45688885 677777766664544456788887765432211121 112333221 1122 344555
Q ss_pred EEEEEEEEECC----------------CCCCeEEEEEEEEEEeCCCCCCeeeCCceEEEEeCCCCCCcEEEEEE
Q psy11062 154 HTIVVSATDQG----------------DPPMSSNLTVLLEVQDVNDNPPVFERSEYFVSVSEALPAKSQVRTTC 211 (281)
Q Consensus 154 y~l~V~a~D~~----------------~p~~~~~~~v~I~V~DvND~~P~f~~~~y~~~v~E~~~~gt~v~~v~ 211 (281)
|.+.+..-... ...+-.....+|.|.| ||++|.|.-..-...|.|+. |...++|.
T Consensus 94 F~v~Ls~~~~~~~~~~d~~~~~~~~~~~a~Lg~~~~atVtI~D-dD~agv~sf~~~~~~V~E~~--G~~~v~V~ 164 (295)
T 3us9_A 94 FLVHLSNVKVSSEASEDGILEANHVSALACLGSPSTATVTIFD-DDHAGIFTFEEPVTHVSESI--GIMEVKVL 164 (295)
T ss_dssp EEEEEECCCCCCCC-------------CCCCCSCCEEEEEEEC-CCCCCEEEESCSEEEEESCS--SEEEEEEE
T ss_pred EEEEEecCccccccccccccccccCCcccccCCCceeEEEEcc-cccccccccCCCeEEEecCC--CeEEEEEE
Confidence 55555432100 0112222345566676 47789875444466788874 55544443
No 67
>2y72_A Collagenase, collagenase G; polycystic kidney disease domain, beta barrel, collagen RECO domain, hydrolase; 1.18A {Clostridium histolyticum} PDB: 3jqu_A 3js7_A
Probab=68.89 E-value=13 Score=25.22 Aligned_cols=31 Identities=13% Similarity=0.325 Sum_probs=24.4
Q ss_pred CccCcceEEEEEEEEECCCCCCeEEEEEEEEEE
Q psy11062 147 DYETSQRHTIVVSATDQGDPPMSSNLTVLLEVQ 179 (281)
Q Consensus 147 D~E~~~~y~l~V~a~D~~~p~~~~~~~v~I~V~ 179 (281)
-|.....|.+.+.++|..+ .+++..+.|.|.
T Consensus 54 ty~~~G~Y~v~LtVtd~~G--~~~t~~~~V~V~ 84 (85)
T 2y72_A 54 AYKKAGTYNVTLKVTDDKG--ATATESFTIEIK 84 (85)
T ss_dssp ECSSCEEEEEEEEEEETTS--CEEEEEEEEEEE
T ss_pred EcCCCeEEEEEEEEEECCC--CEEEEEEEEEEc
Confidence 4667899999999999876 566677777764
No 68
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=65.09 E-value=32 Score=23.89 Aligned_cols=91 Identities=12% Similarity=0.065 Sum_probs=46.5
Q ss_pred CCeeccCcEEEEEeCCCCCCceEEEEEEEeCCCCCCceEEEEEeeCCCCCceeeEE--eCceeEEEEceecCccCcceEE
Q psy11062 78 APEFESTTIRLSVPESAALGLPLYTVVARDKDSGDNGKIRYHLASGNFGDSRLFAV--DQTSGHLSLSKHLDYETSQRHT 155 (281)
Q Consensus 78 ~P~f~~~~~~~~v~En~~~gt~v~~v~a~D~D~g~~~~i~y~l~~~~~~~~~~F~i--d~~tG~i~~~~~LD~E~~~~y~ 155 (281)
||.|....-...+.|+.. ......+... +...++|...+........+.+ +.....|.+ ..+..+..+.|.
T Consensus 13 pP~f~~~p~~~~v~~G~~---~~l~C~~~G~---P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I-~~v~~~D~G~Y~ 85 (107)
T 3knb_B 13 PPCFLRFPRPVRVVSGAE---AELKCVVLGE---PPPVVVWEKGGQQLAASERLSFPADGAEHGLLL-TAALPTDAGVYV 85 (107)
T ss_dssp EEEEEECCCCEEEETTSC---EEEEEEEEEE---SCCEEEEEETTEECCCCSSEECCEETTEEEEEE-SSCCGGGCEEEE
T ss_pred CCEEEeCCCcEEEeCCCc---EEEEEEEEEe---cCCEEEEEECcccccceeeEEEeecCceEEEEE-ecCChhhCEEEE
Confidence 688876665677777653 4444554421 1234665443211122333444 222334443 345556667775
Q ss_pred EEEEEEECCCCCCeEEEEEEEEEEe
Q psy11062 156 IVVSATDQGDPPMSSNLTVLLEVQD 180 (281)
Q Consensus 156 l~V~a~D~~~p~~~~~~~v~I~V~D 180 (281)
+ .|.+..+ ...+.+.+.|.+
T Consensus 86 C--~a~N~~G---~~~~~~~l~V~~ 105 (107)
T 3knb_B 86 C--RARNAAG---EAYAAAAVTVLE 105 (107)
T ss_dssp E--EEEETTE---EEEEEEEEEEEC
T ss_pred E--EEEECCC---EEEEEEEEEEEc
Confidence 4 5666554 455566666664
No 69
>2yrl_A KIAA1837 protein; PKD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=46.33 E-value=49 Score=23.11 Aligned_cols=32 Identities=16% Similarity=0.319 Sum_probs=25.5
Q ss_pred eccEEEEEEEEEeCCCCceeEEEEEEEEEecCC
Q psy11062 44 VTGVLLLSVQASSGSPPLYSYAQVKVTIEDRND 76 (281)
Q Consensus 44 ~~~~~~l~v~a~dg~~~~~~~~~v~i~V~dvNd 76 (281)
....|.|.+.++|+.+ .+++..+.|.|...+.
T Consensus 67 ~~G~y~f~LTVtD~~G-~s~s~~v~VtV~~~~~ 98 (102)
T 2yrl_A 67 QVGTYVFTLTVKDERN-LQSQSSVNVIVKEESG 98 (102)
T ss_dssp CSSEEEEEEEEEBTTC-CEEEEEEEEEEECCSS
T ss_pred CCeEEEEEEEEEeCCC-CEEEeEEEEEEcCCCC
Confidence 3568999999998873 5678889999987665
No 70
>1op4_A Neural-cadherin; beta sandwich, cadherin-like domain, cell adhesion; NMR {Mus musculus} SCOP: b.1.6.1
Probab=42.46 E-value=96 Score=23.83 Aligned_cols=47 Identities=13% Similarity=0.285 Sum_probs=30.0
Q ss_pred CCcEEEEEEeCCCCceEEEECCccEEEECcCCCceeccEEEEEEEEEeCCCC
Q psy11062 9 SNPIRYTIHSGDPEGYFTLDSTTGVIRTAATLDHEVTGVLLLSVQASSGSPP 60 (281)
Q Consensus 9 ~~~l~Y~i~~g~~~~~F~Id~~~G~i~~~~~LD~E~~~~~~l~v~a~dg~~~ 60 (281)
+..+.|.- .++ ..|.|++ .|.|++++++-.-.. .-.+.|.|.|....
T Consensus 66 ~~~~~~~s--sDp-~dFkV~~-DGtVya~r~v~L~~~-~~~F~V~a~D~~t~ 112 (159)
T 1op4_A 66 KRKVQYES--SEP-ADFKVDE-DGTVYAVRSFPLTAE-QAKFLIYAQDKETQ 112 (159)
T ss_dssp CCCEEEEC--CCS-SEEEEET-TTEEEEESCCSCSSS-CEEEEEEEEETTTT
T ss_pred CCceeEEc--CCC-CCeEEeC-CCcEEEecceeecCC-CcEEEEEEEcCCCc
Confidence 34455654 344 2599987 599999988643222 23788888885433
No 71
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=41.72 E-value=87 Score=21.82 Aligned_cols=29 Identities=21% Similarity=0.177 Sum_probs=20.9
Q ss_pred ccEEEEEEEEEeCCCCceeEEEEEEEEEe
Q psy11062 45 TGVLLLSVQASSGSPPLYSYAQVKVTIED 73 (281)
Q Consensus 45 ~~~~~l~v~a~dg~~~~~~~~~v~i~V~d 73 (281)
...|.|.++|.|..+.......|.|.|.+
T Consensus 60 ~G~htl~a~AtD~~G~~~tS~~v~vtV~~ 88 (98)
T 3pe9_A 60 EGNHEISVIAYDDDDAASTPDSVKIFVKQ 88 (98)
T ss_dssp SEEEEEEEEEEETTCCBCCCEEEEEEEEC
T ss_pred CccEEEEEEEEECCCCEEeeeEEEEEECc
Confidence 46799999999876655556677777653
No 72
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=40.42 E-value=91 Score=21.70 Aligned_cols=71 Identities=18% Similarity=0.179 Sum_probs=37.1
Q ss_pred ceEEEEEEEeCCCCCCceEEEEEeeCCCCCceeeEEeCceeEEEEceecCccCcceEEEEEEEEECCCCCCeEEEEEEEE
Q psy11062 98 LPLYTVVARDKDSGDNGKIRYHLASGNFGDSRLFAVDQTSGHLSLSKHLDYETSQRHTIVVSATDQGDPPMSSNLTVLLE 177 (281)
Q Consensus 98 t~v~~v~a~D~D~g~~~~i~y~l~~~~~~~~~~F~id~~tG~i~~~~~LD~E~~~~y~l~V~a~D~~~p~~~~~~~v~I~ 177 (281)
.+.....|.|.|. .=.++.|.+.++ ....+...-.-.. ++.. .+.|.|.++|+|..+... ....|.|.
T Consensus 18 ~v~i~a~A~D~dg-~V~kVef~vdg~------~vg~dt~apy~~~---w~~~-~G~htl~a~AtD~~G~~~-tS~~v~vt 85 (98)
T 3pe9_A 18 FLKITATASDSDG-KISRVDFLVDGE------VIGSDREAPYEYE---WKAV-EGNHEISVIAYDDDDAAS-TPDSVKIF 85 (98)
T ss_dssp EEEEEEEECCSSS-CEEEEEEEETTE------EEEEECSSSEEEE---EECC-SEEEEEEEEEEETTCCBC-CCEEEEEE
T ss_pred EEEEEEEEEeCCC-CEEEEEEEECCE------EecccccCCEEEE---EEcC-CccEEEEEEEEECCCCEE-eeeEEEEE
Confidence 3456677777763 234666666541 1222211110001 1112 588999999999877432 23455555
Q ss_pred EEe
Q psy11062 178 VQD 180 (281)
Q Consensus 178 V~D 180 (281)
|.+
T Consensus 86 V~~ 88 (98)
T 3pe9_A 86 VKQ 88 (98)
T ss_dssp EEC
T ss_pred ECc
Confidence 543
No 73
>2yhg_A SDE_182CT, cellulose-binding protein; hydrolase, glycoside hydrolase; HET: BTB; 1.08A {Saccharophagus degradans}
Probab=40.25 E-value=1.1e+02 Score=27.56 Aligned_cols=61 Identities=15% Similarity=0.301 Sum_probs=39.8
Q ss_pred CcEEEEEEeCCCC----ceEEEE-CCccEEEECcCCCceeccEEEEEEEEEeC-CCCceeEEEEEEEE
Q psy11062 10 NPIRYTIHSGDPE----GYFTLD-STTGVIRTAATLDHEVTGVLLLSVQASSG-SPPLYSYAQVKVTI 71 (281)
Q Consensus 10 ~~l~Y~i~~g~~~----~~F~Id-~~~G~i~~~~~LD~E~~~~~~l~v~a~dg-~~~~~~~~~v~i~V 71 (281)
+.|+|+=..-... ....|. .+...++...+-+ +....+.|.+.|+|+ .|.+++...|.|.|
T Consensus 370 D~LtY~W~q~~g~g~~~~~vtls~~~~~~~sft~P~~-~~~~tl~f~LtVTD~~~p~lTs~~rViVtV 436 (437)
T 2yhg_A 370 DSLNYSWSHYGEADSYSGSVSISNSSSASANVQIPSN-AGGKDIHILLTLRDNGSPNLYAYRRVVINV 436 (437)
T ss_dssp CCEEEEEEECTTTSSCCSCCCEETTTSSEEEEECCTT-CTTCEEEEEEEEEECSSSCCEEEEEEEEEE
T ss_pred CeEEEEEEEeCCCCccccceEeecCCCceEEEEeCCC-CCCcEEEEEEEEEeCCCCCccEEeEEEEEe
Confidence 4678876532211 235554 4455677665544 345679999999975 46788888888876
No 74
>2kpn_A Bacillolysin; solution structure, BIG_3 domain, PF07523, PSI BIG-open NESG, cell WALL, hydrolase, peptidoglycan-anchor; NMR {Bacillus cereus atcc 14579}
Probab=39.06 E-value=73 Score=22.53 Aligned_cols=54 Identities=17% Similarity=0.281 Sum_probs=38.6
Q ss_pred EEEECCccEE----EECcCCCceeccEEEEEEEEEeCCCCceeEEEEEEEEEecCCCCC
Q psy11062 25 FTLDSTTGVI----RTAATLDHEVTGVLLLSVQASSGSPPLYSYAQVKVTIEDRNDNAP 79 (281)
Q Consensus 25 F~Id~~~G~i----~~~~~LD~E~~~~~~l~v~a~dg~~~~~~~~~v~i~V~dvNd~~P 79 (281)
=..|...|.| .+....|..+...|.++..++|..+ ..+++..+|.|.+..+..|
T Consensus 34 tA~D~~DGDlT~~I~V~g~Vdt~k~G~Y~VtY~VtDs~G-n~~t~trtVtV~~~~e~~~ 91 (103)
T 2kpn_A 34 LAIDKEDGDLTSKIKVDGEVDTTKAGTYVLTYTVTDSKG-HEVTAKQTVTVKVREEVKN 91 (103)
T ss_dssp EEECSSSCBCGGGCEEESCCCSSSCEEEEEEEEEECTTS-CEEEEEEEEEEECSSCCCC
T ss_pred EEEcCCCCCcceeEEEeCcccCCCceEEEEEEEEEcCCC-CEEEEEEEEEEeCCCcccC
Confidence 3455555644 4556789888899999999997653 4567788888887665544
No 75
>2e7m_A Protein KIAA0319; PKD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=39.05 E-value=29 Score=25.16 Aligned_cols=58 Identities=16% Similarity=0.102 Sum_probs=33.3
Q ss_pred eEEEEEeeCCCCCceeeEEeCceeEEEEceecCccCcceEEEEEEEEECCCCCCeEEEEEEEEEEe
Q psy11062 115 KIRYHLASGNFGDSRLFAVDQTSGHLSLSKHLDYETSQRHTIVVSATDQGDPPMSSNLTVLLEVQD 180 (281)
Q Consensus 115 ~i~y~l~~~~~~~~~~F~id~~tG~i~~~~~LD~E~~~~y~l~V~a~D~~~p~~~~~~~v~I~V~D 180 (281)
...|+++.++.+...... ....+.+.+.+ | ..+.|.|.+.++|... .....+.|.|+.
T Consensus 48 syeWtli~gP~d~~~~~~-~~~~~tlkLS~-L---~eG~Y~FqltVtd~~~---~ge~~vnVTV~P 105 (113)
T 2e7m_A 48 NYEWNLISHPTDYQGEIK-QGHKQTLNLSQ-L---SVGLYVFKVTVSSENA---FGEGFVNVTVKP 105 (113)
T ss_dssp CCBCCEEECCTTCCCCCC-TTSSSEEEECS-C---CSEEEEECCEEEETTE---EEECCEEEEEEC
T ss_pred eeEEEEecCCCCCceEEe-cCCCCeeEecC-c---CcEEEEEEEEEECCCC---CccceEEEEEcC
Confidence 345677776422222222 23445555532 2 4688999999999876 344455555554
No 76
>1u2c_A Dystroglycan; IG-like domain, S6 like fold, protein binding; 2.30A {Mus musculus} SCOP: b.1.6.2 d.272.1.1
Probab=36.65 E-value=1.4e+02 Score=24.68 Aligned_cols=56 Identities=27% Similarity=0.187 Sum_probs=36.8
Q ss_pred CCceeeEEeCceeEEEEceecCccCcceEEEEEEEEECC---CCCCeEEEEEEEEEE--eCCC
Q psy11062 126 GDSRLFAVDQTSGHLSLSKHLDYETSQRHTIVVSATDQG---DPPMSSNLTVLLEVQ--DVND 183 (281)
Q Consensus 126 ~~~~~F~id~~tG~i~~~~~LD~E~~~~y~l~V~a~D~~---~p~~~~~~~v~I~V~--DvND 183 (281)
....|...|+.++.+ .--|++. ..+.|.+.|.|++.+ .....+.-.+.|.|. |.||
T Consensus 44 ~LPsWL~fd~~t~Tf-sG~P~~~-D~G~~~i~VtA~~~~~~g~~~~~asdvF~I~V~ped~~e 104 (246)
T 1u2c_A 44 ALPSWLHWDPHSHIL-EGLPLDT-DKGVHYISVSAARLGANGSHVPQTSSVFSIEVYPEDHNE 104 (246)
T ss_dssp SCCTTEEEETTTTEE-EECCCGG-GCEEEEEEEEEEEECTTSCEEEEEEEEEEEEEESSCCC-
T ss_pred CCCcceEEcCCCCeE-EeccCCC-CcceEEEEEEEeeccCCCCccccccceEEEEEecCCCcc
Confidence 356788888888754 2335543 456799999998653 223345677888888 6655
No 77
>3klq_A Putative pilus anchoring protein; CNAB fold, inverse IGG fold, polyproline-II-like helix, cell; 1.90A {Streptococcus pyogenes}
Probab=34.52 E-value=1.5e+02 Score=22.31 Aligned_cols=94 Identities=17% Similarity=0.218 Sum_probs=44.9
Q ss_pred eeEEEEEEEEEecCCCCCeeccCcEEEEEeCCCCCCceEEEEEEEeCCCCCCceEEEE-EeeCCCCCceeeEEeCceeEE
Q psy11062 62 YSYAQVKVTIEDRNDNAPEFESTTIRLSVPESAALGLPLYTVVARDKDSGDNGKIRYH-LASGNFGDSRLFAVDQTSGHL 140 (281)
Q Consensus 62 ~~~~~v~i~V~dvNd~~P~f~~~~~~~~v~En~~~gt~v~~v~a~D~D~g~~~~i~y~-l~~~~~~~~~~F~id~~tG~i 140 (281)
.+++++.|.|....+. | .....|++.+....|.- ....+.- ++ ++.+.|. |.=.. .+.-.+.|....|.
T Consensus 4 ~~~~~~~i~v~~~~~~-~-~~~~~Fsf~L~~~dPmP-~~~tvt~-~a----~G~v~F~~i~f~~-~G~Y~YtI~E~~G~- 73 (141)
T 3klq_A 4 DSTVQTSISVENVLER-A-GDSTPFSVALESIDAMK-TIEEITI-AG----SGKASFSPLTFTT-VGQYTYRVYQKPSQ- 73 (141)
T ss_dssp -CCEEECCEEEECCSS-T-TCCCEEEEEEEETTTTE-EEEEEEE-ES----SEEEECCCEEECS-CEEEEEEEEECCCS-
T ss_pred ccceEEEEEEEEeccc-C-CCCceEEEEEEeCCCCC-CcEEEEE-cC----CCcEEeCceEeCC-CEEEEEEEEEeCCC-
Confidence 3556777777777775 3 44455667665443321 1222222 22 2234432 21110 12334444333332
Q ss_pred EEceecCccCcceEEEEEEEEECCCCCC
Q psy11062 141 SLSKHLDYETSQRHTIVVSATDQGDPPM 168 (281)
Q Consensus 141 ~~~~~LD~E~~~~y~l~V~a~D~~~p~~ 168 (281)
..-+.|.. ..|.++|.+.|.+...+
T Consensus 74 --~~gvtYD~-~~y~VtV~V~~d~~G~L 98 (141)
T 3klq_A 74 --NKDYQADT-TVFDVLVYVTYDEDGTL 98 (141)
T ss_dssp --STTEECCC-CEEEEEEEEEECTTSCE
T ss_pred --CCCcEEcC-CEEEEEEEEEECCCCCE
Confidence 12344444 66999999998764333
No 78
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=32.43 E-value=1.1e+02 Score=20.45 Aligned_cols=91 Identities=13% Similarity=0.192 Sum_probs=46.8
Q ss_pred CCeeccCcEEEEEeCCCCCCceEEEEEEEeCCCCCCceEEEEEeeCC--CCCceeeEEeCce--eEEEEceecCccCcce
Q psy11062 78 APEFESTTIRLSVPESAALGLPLYTVVARDKDSGDNGKIRYHLASGN--FGDSRLFAVDQTS--GHLSLSKHLDYETSQR 153 (281)
Q Consensus 78 ~P~f~~~~~~~~v~En~~~gt~v~~v~a~D~D~g~~~~i~y~l~~~~--~~~~~~F~id~~t--G~i~~~~~LD~E~~~~ 153 (281)
||.|....-...+.|... ......+... +...++|...+.. ......|.+.... ..|.+ ..+..+..+.
T Consensus 5 PP~i~~~p~~~~v~~G~~---~~l~C~~~g~---P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I-~~~~~~D~G~ 77 (100)
T 3knb_A 5 PPKIEALPSDISIDEGKV---LTVACAFTGE---PTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLII-MDVQKQDGGL 77 (100)
T ss_dssp EEEECCCCSEEEEETTSE---EEEEEEEEEE---SCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEE-SSCCGGGCEE
T ss_pred CCEEEeCCCcEEEeCCCe---EEEEEEEEEe---cCCEEEEEECceEeeeeccceeeeecccceEEEEE-cCCCccCCEE
Confidence 678876666677877643 3444444421 1234665543211 1123345554332 23433 3455566677
Q ss_pred EEEEEEEEECCCCCCeEEEEEEEEEEe
Q psy11062 154 HTIVVSATDQGDPPMSSNLTVLLEVQD 180 (281)
Q Consensus 154 y~l~V~a~D~~~p~~~~~~~v~I~V~D 180 (281)
|.+ .|++..+ +..+.+.|.|..
T Consensus 78 Y~C--~a~N~~G---~~~~~~~l~V~~ 99 (100)
T 3knb_A 78 YTL--SLGNEFG---SDSATVNIHIRS 99 (100)
T ss_dssp EEE--EEEETTE---EEEEEEEEEEEC
T ss_pred EEE--EEEECCC---EEEEEEEEEEEE
Confidence 765 5566554 455666666654
No 79
>1u2c_A Dystroglycan; IG-like domain, S6 like fold, protein binding; 2.30A {Mus musculus} SCOP: b.1.6.2 d.272.1.1
Probab=29.93 E-value=2.3e+02 Score=23.32 Aligned_cols=66 Identities=20% Similarity=0.305 Sum_probs=41.2
Q ss_pred CCcEEEEEEe--CC-CCceEEEECCccEEEECcCCCceeccEEEEEEEEE----eCCCCceeEEEEEEEEE--ecCC
Q psy11062 9 SNPIRYTIHS--GD-PEGYFTLDSTTGVIRTAATLDHEVTGVLLLSVQAS----SGSPPLYSYAQVKVTIE--DRND 76 (281)
Q Consensus 9 ~~~l~Y~i~~--g~-~~~~F~Id~~~G~i~~~~~LD~E~~~~~~l~v~a~----dg~~~~~~~~~v~i~V~--dvNd 76 (281)
++..+|++.. |+ -..|...|+.++.+.-. +++... ..|.+.|.|. +|.....+...+.|.|. |.||
T Consensus 30 gd~~~y~vt~a~g~~LPsWL~fd~~t~TfsG~-P~~~D~-G~~~i~VtA~~~~~~g~~~~~asdvF~I~V~ped~~e 104 (246)
T 1u2c_A 30 SSGEIIKVSAAGKEALPSWLHWDPHSHILEGL-PLDTDK-GVHYISVSAARLGANGSHVPQTSSVFSIEVYPEDHNE 104 (246)
T ss_dssp CTTEEEEEEETTSSSCCTTEEEETTTTEEEEC-CCGGGC-EEEEEEEEEEEECTTSCEEEEEEEEEEEEEESSCCC-
T ss_pred CCccEEEEEecCCCCCCcceEEcCCCCeEEec-cCCCCc-ceEEEEEEEeeccCCCCccccccceEEEEEecCCCcc
Confidence 3556777764 22 23799999998866543 343333 3488999997 34333445567778888 6666
No 80
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=29.92 E-value=1.4e+02 Score=28.48 Aligned_cols=70 Identities=9% Similarity=0.139 Sum_probs=36.8
Q ss_pred EEEEeCCCCCCceEEEEEeeCCCCCceeeEEeCceeEEEEceecCccCcceEEEEEEEEECCCCCCeEEEEEEEEEE
Q psy11062 103 VVARDKDSGDNGKIRYHLASGNFGDSRLFAVDQTSGHLSLSKHLDYETSQRHTIVVSATDQGDPPMSSNLTVLLEVQ 179 (281)
Q Consensus 103 v~a~D~D~g~~~~i~y~l~~~~~~~~~~F~id~~tG~i~~~~~LD~E~~~~y~l~V~a~D~~~p~~~~~~~v~I~V~ 179 (281)
+.|.+--.+...+..|+|.+ -...+..+......+.. ..-..+.|.|.|+|++..+.-....+.+.|.|.
T Consensus 678 f~~l~y~~~~~~~y~Y~L~G---~d~~W~~~~~~~~~~~y----tnL~pG~Y~f~V~a~~~~g~w~~~~~~l~I~I~ 747 (758)
T 3ott_A 678 LSDLPYSLDEKNKFVYRLEG---MDKEWNFLKSNINRITY----SNLSYGNYQLIISKLERDGQPSNRPHILNIRIL 747 (758)
T ss_dssp EECCCTTCSSCCCEEEEEET---TCSSCEECCTTCCEEEE----CSCCSEEEEEEEEEBCTTSCBCSSCEEEEEEEC
T ss_pred EEcccCCCCccCeEEEEecC---CCCCccCCCCCcceEEe----cCCCCccEEEEEEEeCCCCCccCccEEEEEEEC
Confidence 33433333444566777765 22344433222222221 122468899999999976632223456666664
No 81
>1b4r_A Protein (PKD1_human); PKD domain 1 from human polycystein-1, polycystin (precursor), membrane protein; NMR {Homo sapiens} SCOP: b.1.3.1
Probab=29.31 E-value=1e+02 Score=20.63 Aligned_cols=29 Identities=17% Similarity=0.131 Sum_probs=21.1
Q ss_pred ccCcceEEEEEEEEECCCCCCeEEEEEEEEEE
Q psy11062 148 YETSQRHTIVVSATDQGDPPMSSNLTVLLEVQ 179 (281)
Q Consensus 148 ~E~~~~y~l~V~a~D~~~p~~~~~~~v~I~V~ 179 (281)
|.....|.+++.+++++. ++.+...|+|.
T Consensus 51 Y~~~G~YtV~Ltv~~g~~---~~~a~~~V~V~ 79 (80)
T 1b4r_A 51 YVLPGRYHVTAVLALGAG---SALLGTDVQVE 79 (80)
T ss_dssp ECSSEEEEEEEEEECSSC---EEEEEEEEEEB
T ss_pred CCCCcEEEEEEEEEeCCc---eEEEEEEEEEE
Confidence 557789999999996553 66666666653
No 82
>2y72_A Collagenase, collagenase G; polycystic kidney disease domain, beta barrel, collagen RECO domain, hydrolase; 1.18A {Clostridium histolyticum} PDB: 3jqu_A 3js7_A
Probab=28.68 E-value=1.1e+02 Score=20.18 Aligned_cols=30 Identities=7% Similarity=0.152 Sum_probs=21.5
Q ss_pred ceeccEEEEEEEEEeCCCCceeEEEEEEEEE
Q psy11062 42 HEVTGVLLLSVQASSGSPPLYSYAQVKVTIE 72 (281)
Q Consensus 42 ~E~~~~~~l~v~a~dg~~~~~~~~~v~i~V~ 72 (281)
|.....|.+.+.++|..+ ...+..+.|.|.
T Consensus 55 y~~~G~Y~v~LtVtd~~G-~~~t~~~~V~V~ 84 (85)
T 2y72_A 55 YKKAGTYNVTLKVTDDKG-ATATESFTIEIK 84 (85)
T ss_dssp CSSCEEEEEEEEEEETTS-CEEEEEEEEEEE
T ss_pred cCCCeEEEEEEEEEECCC-CEEEEEEEEEEc
Confidence 555668999999998764 445666777664
No 83
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=24.87 E-value=1.6e+02 Score=19.78 Aligned_cols=94 Identities=14% Similarity=0.075 Sum_probs=50.2
Q ss_pred CCeeccCcEEEEEeCCCCCCceEEEEEEEeCCCCCCceEEEEEeeCCCCCceeeEEeC--ceeEEEEceecCccCcceEE
Q psy11062 78 APEFESTTIRLSVPESAALGLPLYTVVARDKDSGDNGKIRYHLASGNFGDSRLFAVDQ--TSGHLSLSKHLDYETSQRHT 155 (281)
Q Consensus 78 ~P~f~~~~~~~~v~En~~~gt~v~~v~a~D~D~g~~~~i~y~l~~~~~~~~~~F~id~--~tG~i~~~~~LD~E~~~~y~ 155 (281)
+|.|....-...+.|... ......+.. . +...+.|...+........+.+.. ..+.|.+ ..+..+..+.|.
T Consensus 7 pp~i~~~~~~~~v~~G~~---v~l~C~~~g-~--p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~I-~~v~~~D~G~Y~ 79 (114)
T 2cqv_A 7 GPQIIQFPEDQKVRAGES---VELFGKVTG-T--QPITCTWMKFRKQIQESEHMKVENSENGSKLTI-LAARQEHCGCYT 79 (114)
T ss_dssp CCEESCCCCSEEEETTCC---EEEEEEEES-S--SSCEEEEEESSSBCCCSSSEEEEECSSEEEEEE-TTCCTTTCEEEE
T ss_pred CCEEEeCCCCeEEeCCCe---EEEEEEEEc-C--CCCEEEEEECCEECcCCCCEEEEEcCCEEEEEE-CCCChhcCEEEE
Confidence 677876555566766643 444555543 1 233455544432222223455532 2334433 345566677777
Q ss_pred EEEEEEECCCCCCeEEEEEEEEEEeCCC
Q psy11062 156 IVVSATDQGDPPMSSNLTVLLEVQDVND 183 (281)
Q Consensus 156 l~V~a~D~~~p~~~~~~~v~I~V~DvND 183 (281)
.. |.+..+ .....+.+.|.+..+
T Consensus 80 C~--a~N~~g---~~~~~~~l~V~~~p~ 102 (114)
T 2cqv_A 80 LL--VENKLG---SRQAQVNLTVVDKPD 102 (114)
T ss_dssp EE--EECSSC---EEECCEEEEEECSCS
T ss_pred EE--EEECCC---cEEEEEEEEEECCCC
Confidence 65 455543 556677888887655
No 84
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=23.03 E-value=2.9e+02 Score=26.33 Aligned_cols=77 Identities=17% Similarity=0.202 Sum_probs=40.7
Q ss_pred EEEEEEeCCCCCCceEEEEEeeCCCCCceeeEEeCceeEEEEceecCccCcceEEEEEEEEECCCCCCeEEEEEEEEEEe
Q psy11062 101 YTVVARDKDSGDNGKIRYHLASGNFGDSRLFAVDQTSGHLSLSKHLDYETSQRHTIVVSATDQGDPPMSSNLTVLLEVQD 180 (281)
Q Consensus 101 ~~v~a~D~D~g~~~~i~y~l~~~~~~~~~~F~id~~tG~i~~~~~LD~E~~~~y~l~V~a~D~~~p~~~~~~~v~I~V~D 180 (281)
..+.|.+-..+.+-+..|+|.+ -...+.... ....+.. ..| ..+.|.|.|+|++..+.-....+.+.|.|.
T Consensus 711 i~fs~l~y~~~~~~~y~YrL~G---~d~~W~~~~-~~~~~~y-tnL---~pG~Y~f~V~a~n~~g~w~~~~~~l~i~I~- 781 (795)
T 4a2l_A 711 IEFVVSNYISGQHNTFAYKLEG---YDKEWYYLT-DSRTVSY-SNL---PQGTYQFLVKAANSDGKWNPIPTALEIIVL- 781 (795)
T ss_dssp EEEEECCTTTTTCCEEEEEEET---TCSSCEEES-SCCEEEE-ECC---CSEEEEEEEEEECTTSCBCSSCEEEEEEEC-
T ss_pred EEEEEccCCCccccEEEEEEeC---CCCCccCCC-CcCeEEe-ccc---CCCeEEEEEEEECCCCccCCCceEEEEEEE-
Confidence 3444544444455567788876 234444442 1222221 223 468899999999976632123455666663
Q ss_pred CCCCCCeeeC
Q psy11062 181 VNDNPPVFER 190 (281)
Q Consensus 181 vND~~P~f~~ 190 (281)
||-+..
T Consensus 782 ----Ppww~t 787 (795)
T 4a2l_A 782 ----PIWYKT 787 (795)
T ss_dssp ----CCC---
T ss_pred ----CCcccC
Confidence 565543
No 85
>2c4x_A Endoglucanase, ctcel9D-CEL44A; cellulase ctcel9D-CEL44A, PKD domain, CBM44, carbohydrate BI module, beta-sandwich proteins, cellulosome; 2.0A {Clostridium thermocellum} PDB: 2c26_A
Probab=22.11 E-value=1.5e+02 Score=24.72 Aligned_cols=34 Identities=21% Similarity=0.310 Sum_probs=27.0
Q ss_pred cCccCcceEEEEEEEEECCCCCCeEEEEEEEEEEeC
Q psy11062 146 LDYETSQRHTIVVSATDQGDPPMSSNLTVLLEVQDV 181 (281)
Q Consensus 146 LD~E~~~~y~l~V~a~D~~~p~~~~~~~v~I~V~Dv 181 (281)
.-|.....|.+++.|+|..+ .+++.+..|.|...
T Consensus 63 htY~~~GtYtVtLTVtD~~G--~s~t~t~~ItV~~~ 96 (260)
T 2c4x_A 63 YKYKNPGTYKVKLIVTDNQG--ASSSFTATIKVTSA 96 (260)
T ss_dssp ECCSSCEEEEEEEEEEETTS--CEEEEEEEEEEBCS
T ss_pred EEeCCCEEEEEEEEEEeCCC--CeEEEEEEEEECCC
Confidence 45678899999999999876 45677778888765
No 86
>2ptt_B Natural killer cell receptor 2B4; CD244, CD48, NK cell receptor, X-RAY, immune system; 1.63A {Mus musculus} PDB: 2ptu_A 1z2k_A
Probab=21.16 E-value=1.9e+02 Score=20.77 Aligned_cols=49 Identities=20% Similarity=0.217 Sum_probs=32.4
Q ss_pred CceeeEEeCceeEEEEceecCccCcceEEEEEEEEECCCCCCeEEEEEEEEEEe
Q psy11062 127 DSRLFAVDQTSGHLSLSKHLDYETSQRHTIVVSATDQGDPPMSSNLTVLLEVQD 180 (281)
Q Consensus 127 ~~~~F~id~~tG~i~~~~~LD~E~~~~y~l~V~a~D~~~p~~~~~~~v~I~V~D 180 (281)
-.+.|.++..+|.|... ..--|..+.|.|.| ++..+ ...+..+.+.|.|
T Consensus 64 fk~r~~fd~~n~AL~I~-~vQ~eDSg~Y~LeV--t~~tG--~v~~~~fql~VfD 112 (112)
T 2ptt_B 64 FSDIYGFDYGDFALSIK-SAKLQDSGHYLLEI--TNTGG--KVCNKNFQLLILD 112 (112)
T ss_dssp GGGTEEECTTTCCEEES-SCCGGGCEEEEEEE--ECTTC--BEEEEEEEEEEC-
T ss_pred eCCEEEEecCCcEEEEE-ecCcccCceEEEEE--ecCCC--cEEEEEEEEEeeC
Confidence 35667788888887653 34445678888888 44443 4677778887765
No 87
>2kzw_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina mazei}
Probab=20.42 E-value=1.8e+02 Score=21.82 Aligned_cols=32 Identities=9% Similarity=0.206 Sum_probs=25.3
Q ss_pred CccCcceEEEEEEEEECCCCCCeEEEEEEEEEEeC
Q psy11062 147 DYETSQRHTIVVSATDQGDPPMSSNLTVLLEVQDV 181 (281)
Q Consensus 147 D~E~~~~y~l~V~a~D~~~p~~~~~~~v~I~V~Dv 181 (281)
-|...+.|.+++.|+|..+ +...+..+.|+.-
T Consensus 109 tY~~~G~YtVtLtvtn~~G---~~~~t~~~~i~~~ 140 (145)
T 2kzw_A 109 TFFNEGEYIVSLIVSNEND---SDSASVTIRALEH 140 (145)
T ss_dssp CCSSCEEEEEEEEEECSSC---EEEEEEEEEEECT
T ss_pred EcCCCcEEEEEEEEEcCCC---CeeEEEeeeeeec
Confidence 4667899999999999876 6667777777753
Done!