BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11065
(138 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|340728851|ref|XP_003402727.1| PREDICTED: far upstream element-binding protein 1-like [Bombus
terrestris]
Length = 738
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/103 (57%), Positives = 72/103 (69%), Gaps = 11/103 (10%)
Query: 18 RNND---NFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNET 74
R ND N+ N FN +G G T + ++V VP+AAVGVVIGKGGDMIKK+Q ET
Sbjct: 280 RGNDRSGNYSNDSSFN-HGSG-------TTDGVEVLVPRAAVGVVIGKGGDMIKKIQAET 331
Query: 75 GARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELIDSVM 117
GARVQF Q RED P DR+C++SG V++ R RI+ELIDSVM
Sbjct: 332 GARVQFQQGREDGPGDRKCIVSGKHQAVEQVRQRIQELIDSVM 374
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 46/75 (61%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+++ +P VG++IGKGG+ IK+LQ ++GA++ +Q ++ ++G P +V+ A+
Sbjct: 201 VEIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQEQEKPLRITGDPQKVEYAK 260
Query: 107 ARIEELIDSVMVEQF 121
+ ELI ++ F
Sbjct: 261 QLVYELIAEKEMQMF 275
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 17 GRNNDNFGNMREFNENG--DGR-GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNE 73
G + FGN R NE G D R GG + E + VP + G++IGKGG+ IK++ +
Sbjct: 388 GPRGNGFGNNRNPNEYGGWDRRQGGPMQDKIETM-FTVPSSKCGIIIGKGGETIKQINQQ 446
Query: 74 TGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
TGA + + + + +++ ++ G+P+QV+ A+
Sbjct: 447 TGAHCELDRRNQSNENEKIFIIRGNPEQVEHAK 479
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ VP VG++IG+GG+ I +LQ+ETG ++Q P +R C L+GS +EA R
Sbjct: 112 IRVPDNMVGLIIGRGGEQITRLQSETGCKIQMAPESGGLP-ERLCTLTGS----REAVNR 166
Query: 109 IEELIDSVM 117
+EL+ S++
Sbjct: 167 AKELVLSIV 175
>gi|350412234|ref|XP_003489579.1| PREDICTED: far upstream element-binding protein 1-like [Bombus
impatiens]
Length = 736
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/103 (57%), Positives = 72/103 (69%), Gaps = 11/103 (10%)
Query: 18 RNND---NFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNET 74
R ND N+ N FN +G G T + ++V VP+AAVGVVIGKGGDMIKK+Q ET
Sbjct: 280 RGNDRSGNYSNDSSFN-HGSG-------TTDGVEVLVPRAAVGVVIGKGGDMIKKIQAET 331
Query: 75 GARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELIDSVM 117
GARVQF Q RED P DR+C++SG V++ R RI+ELIDSVM
Sbjct: 332 GARVQFQQGREDGPGDRKCIVSGKHQAVEQVRQRIQELIDSVM 374
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 46/75 (61%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+++ +P VG++IGKGG+ IK+LQ ++GA++ +Q ++ ++G P +V+ A+
Sbjct: 201 VEIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQEQEKPLRITGDPQKVEYAK 260
Query: 107 ARIEELIDSVMVEQF 121
+ ELI ++ F
Sbjct: 261 QLVYELIAEKEMQMF 275
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 17 GRNNDNFGNMREFNENG--DGR-GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNE 73
G + FGN R NE G D R GG + E + VP + G++IGKGG+ IK++ +
Sbjct: 388 GPRGNGFGNNRNPNEYGGWDRRQGGPMQDKIETM-FTVPSSKCGIIIGKGGETIKQINQQ 446
Query: 74 TGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
TGA + + + + +++ ++ G+P+QV+ A+
Sbjct: 447 TGAHCELDRRNQSNENEKIFIIRGNPEQVEHAK 479
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ VP VG++IG+GG+ I +LQ+ETG ++Q P +R C L+GS +EA R
Sbjct: 112 IRVPDNMVGLIIGRGGEQITRLQSETGCKIQMAPESGGLP-ERLCTLTGS----REAVNR 166
Query: 109 IEELIDSVM 117
+EL+ S++
Sbjct: 167 AKELVLSIV 175
>gi|328783034|ref|XP_624673.3| PREDICTED: far upstream element-binding protein 1-like [Apis
mellifera]
Length = 735
Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/113 (53%), Positives = 76/113 (67%), Gaps = 9/113 (7%)
Query: 5 EFQQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGG 64
E Q R +G R+ N+ N FN +G G T + ++V VP+AAVGVVIGKGG
Sbjct: 270 EMQMFHRGSRGSDRSG-NYSNDSNFN-HGSG-------TTDGVEVLVPRAAVGVVIGKGG 320
Query: 65 DMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELIDSVM 117
DMIKK+Q ETGARVQF Q RED P DR+C++SG V++ R RI+ELIDSVM
Sbjct: 321 DMIKKIQAETGARVQFQQGREDGPGDRKCIVSGKHQAVEQVRQRIQELIDSVM 373
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 52/92 (56%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+++ +P VG++IGKGG+ IK+LQ ++GA++ +Q ++ ++G P +V+ A+
Sbjct: 200 VEIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQEQEKPLRITGDPQKVEYAK 259
Query: 107 ARIEELIDSVMVEQFSGANFDKLRSTVLANRS 138
+ ELI ++ F + RS +N S
Sbjct: 260 QLVYELIAEKEMQMFHRGSRGSDRSGNYSNDS 291
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 17 GRNNDNFGNMREFNENG--DGR-GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNE 73
G + F N R NE G D R GG + E VP + G++IGKGG+ IK++ +
Sbjct: 387 GPRGNGFSNNRNPNEYGGWDRRQGGPMQDKIETT-FTVPSSKCGIIIGKGGETIKQINQQ 445
Query: 74 TGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
TGA + + + + +++ ++ G+P+QV+ A+
Sbjct: 446 TGAHCELDRRNQSNENEKIFIIRGNPEQVEHAK 478
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 43/69 (62%), Gaps = 6/69 (8%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ VP VG++IG+GG+ I +LQ+ETG ++Q E +R C L+GS +EA R
Sbjct: 112 IRVPDNMVGLIIGRGGEQITRLQSETGCKIQMA--SESGLPERVCTLTGS----REAVNR 165
Query: 109 IEELIDSVM 117
+EL+ S++
Sbjct: 166 AKELVLSIV 174
>gi|307187117|gb|EFN72361.1| Far upstream element-binding protein 1 [Camponotus floridanus]
Length = 690
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/116 (52%), Positives = 74/116 (63%), Gaps = 15/116 (12%)
Query: 5 EFQQSRRWQQGIGRNNDNFGNMREFNE---NGDGRGGMWEVTWEVIQVCVPKAAVGVVIG 61
E Q R +G R N+ N FN N DG ++V VP+AAVGVVIG
Sbjct: 268 EMQMFHRGGRGTERTG-NYSNDSSFNHGPANSDG-----------VEVLVPRAAVGVVIG 315
Query: 62 KGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELIDSVM 117
KGGDMIKK+Q E+GA+VQF Q RED P DR+C+LSG V++AR RI+ELIDSVM
Sbjct: 316 KGGDMIKKIQAESGAKVQFQQGREDGPGDRKCLLSGKHQAVEQARQRIQELIDSVM 371
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 56/97 (57%), Gaps = 3/97 (3%)
Query: 25 NMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMR 84
NM + +G G GGM + +++ +P VG++IGKGG+ IK+LQ ++GA++ +Q
Sbjct: 179 NMSSASASG-GNGGMIHPGF--VEIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEG 235
Query: 85 EDDPSDRRCMLSGSPDQVQEARARIEELIDSVMVEQF 121
++ ++G P +V+ A+ + ELI ++ F
Sbjct: 236 PSQEQEKPLRITGDPQKVEYAKQLVYELIAEKEMQMF 272
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 10/81 (12%)
Query: 42 VTWEVIQVC-----VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLS 96
V+ V +C VP VG++IG+GG+ I +LQ+ETG ++Q P +R C L+
Sbjct: 91 VSSSVGGICNEDIRVPDKMVGLIIGRGGEQITRLQSETGCKIQMAPESGGLP-ERVCTLT 149
Query: 97 GSPDQVQEARARIEELIDSVM 117
GS +EA R +EL+ S++
Sbjct: 150 GS----REAVNRAKELVLSIV 166
>gi|270010095|gb|EFA06543.1| hypothetical protein TcasGA2_TC009450 [Tribolium castaneum]
Length = 756
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/69 (73%), Positives = 59/69 (85%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
+V VP+ AVGVVIGKGGDMIKK+Q ETGARVQF Q RE+ P +RRC LSG+P QV++AR
Sbjct: 323 EVLVPRQAVGVVIGKGGDMIKKIQAETGARVQFQQAREEGPGERRCYLSGTPKQVEQARQ 382
Query: 108 RIEELIDSV 116
RIEELIDSV
Sbjct: 383 RIEELIDSV 391
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 44/67 (65%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+++ +P VG++IGKGG+ IK+LQ ++GA++ +Q + ++ +SG P +V+ A+
Sbjct: 222 VEIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQDGPNQEQEKPLRISGDPSKVEYAK 281
Query: 107 ARIEELI 113
+ +LI
Sbjct: 282 QLVYDLI 288
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ VP VG++IG+GG+ I +LQ+E+G ++Q + P DR C LSG+ +EA R
Sbjct: 124 IKVPDKMVGLIIGRGGEQITRLQSESGCKIQMAPDSQGMP-DRVCSLSGT----KEAINR 178
Query: 109 IEELIDSVM 117
+ELI +++
Sbjct: 179 AKELIMNIV 187
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCMLSGSPDQVQE 104
+ VP + GV+IG+GG+ IK++ ++GA + + ++ + +++ ++ G PDQ++
Sbjct: 443 VTFVVPSSKCGVIIGRGGETIKQINQQSGAHCELDRRSQNNQNSNEKTFIIRGDPDQIEA 502
Query: 105 ARARIEELI 113
A+ I + +
Sbjct: 503 AKRIISDKV 511
>gi|189238744|ref|XP_972178.2| PREDICTED: similar to P-element somatic inhibitor [Tribolium
castaneum]
Length = 727
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/69 (73%), Positives = 59/69 (85%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
+V VP+ AVGVVIGKGGDMIKK+Q ETGARVQF Q RE+ P +RRC LSG+P QV++AR
Sbjct: 294 EVLVPRQAVGVVIGKGGDMIKKIQAETGARVQFQQAREEGPGERRCYLSGTPKQVEQARQ 353
Query: 108 RIEELIDSV 116
RIEELIDSV
Sbjct: 354 RIEELIDSV 362
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 44/67 (65%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+++ +P VG++IGKGG+ IK+LQ ++GA++ +Q + ++ +SG P +V+ A+
Sbjct: 193 VEIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQDGPNQEQEKPLRISGDPSKVEYAK 252
Query: 107 ARIEELI 113
+ +LI
Sbjct: 253 QLVYDLI 259
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ VP VG++IG+GG+ I +LQ+E+G ++Q + P DR C LSG+ +EA R
Sbjct: 101 IKVPDKMVGLIIGRGGEQITRLQSESGCKIQMAPDSQGMP-DRVCSLSGT----KEAINR 155
Query: 109 IEELIDSVM 117
+ELI +++
Sbjct: 156 AKELIMNIV 164
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCMLSGSPDQVQE 104
+ VP + GV+IG+GG+ IK++ ++GA + + ++ + +++ ++ G PDQ++
Sbjct: 414 VTFVVPSSKCGVIIGRGGETIKQINQQSGAHCELDRRSQNNQNSNEKTFIIRGDPDQIEA 473
Query: 105 ARARIEELI 113
A+ I + +
Sbjct: 474 AKRIISDKV 482
>gi|383858339|ref|XP_003704659.1| PREDICTED: far upstream element-binding protein 1-like [Megachile
rotundata]
Length = 736
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/103 (57%), Positives = 72/103 (69%), Gaps = 11/103 (10%)
Query: 18 RNND---NFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNET 74
R ND ++ N FN +G G T + ++V VP+AAVGVVIGKGGDMIKK+Q ET
Sbjct: 279 RGNDRSGSYSNDSSFN-HGSG-------TTDGVEVLVPRAAVGVVIGKGGDMIKKIQAET 330
Query: 75 GARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELIDSVM 117
GARVQF Q RED P DR+C+LSG V++ R RI+ELIDSVM
Sbjct: 331 GARVQFQQGREDGPGDRKCILSGKHQAVEQVRQRIQELIDSVM 373
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 51/92 (55%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+++ +P VG++IGKGG+ IK+LQ ++GA++ +Q ++ ++G P +V+ A+
Sbjct: 200 VEIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQEQEKPLRITGDPQKVEYAK 259
Query: 107 ARIEELIDSVMVEQFSGANFDKLRSTVLANRS 138
+ ELI ++ F RS +N S
Sbjct: 260 QLVYELIAEKEMQMFHRGARGNDRSGSYSNDS 291
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 62/112 (55%), Gaps = 7/112 (6%)
Query: 17 GRNNDNFGNMREFNENG--DGR-GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNE 73
G + FGN R NE G D R GG + E VP + G++IGKGG+ IK++ +
Sbjct: 387 GPRGNGFGNNRNPNEYGGWDRRQGGPMQDKIETT-FTVPSSKCGIIIGKGGETIKQINQQ 445
Query: 74 TGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARI--EELIDSVMVEQFSG 123
TGA + + + + +++ ++ G+P+QV+ A+ RI E+L + FSG
Sbjct: 446 TGAHCELDRRNQSNENEKIFIIRGNPEQVEHAK-RIFSEKLGMAPANTSFSG 496
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 43/69 (62%), Gaps = 6/69 (8%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ VP VG++IG+GG+ I +LQ+ETG ++Q E +R C L+GS +EA R
Sbjct: 110 IRVPDKMVGLIIGRGGEQITRLQSETGCKIQMAP--ESGLPERVCTLTGS----REAVNR 163
Query: 109 IEELIDSVM 117
+EL+ S++
Sbjct: 164 AKELVLSIV 172
>gi|307211366|gb|EFN87498.1| Far upstream element-binding protein 1 [Harpegnathos saltator]
Length = 751
Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/101 (56%), Positives = 72/101 (71%), Gaps = 5/101 (4%)
Query: 17 GRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGA 76
GR ++ GN N+NG G + ++V VP+AAVGVVIGKGGDMIKK+Q E+GA
Sbjct: 276 GRGSERPGNYT--NDNGFNHG---PANNDGVEVLVPRAAVGVVIGKGGDMIKKIQAESGA 330
Query: 77 RVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELIDSVM 117
+VQF Q RED P DR+C+LSG V++AR RI+ELIDSVM
Sbjct: 331 KVQFQQGREDGPGDRKCLLSGKHQAVEQARQRIQELIDSVM 371
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 46/75 (61%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+++ +P VG++IGKGG+ IK+LQ ++GA++ +Q ++ ++G P +V+ A+
Sbjct: 198 VEIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQEQEKPLRITGDPQKVEHAK 257
Query: 107 ARIEELIDSVMVEQF 121
+ ELI ++ F
Sbjct: 258 QLVYELIAEKEMQMF 272
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 42/67 (62%), Gaps = 5/67 (7%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I +LQ+ETG ++Q P +R C L+GS +EA R +
Sbjct: 109 VPDKMVGLIIGRGGEQITRLQSETGCKIQMAPESGGLP-ERVCTLTGS----REAVNRAK 163
Query: 111 ELIDSVM 117
EL+ S++
Sbjct: 164 ELVLSIV 170
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 43/72 (59%)
Query: 50 CVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARI 109
VP + G++IGKGG+ IK++ +TGA + + + + +++ ++ G+P+QV+ A+
Sbjct: 420 TVPSSKCGIIIGKGGETIKQINQQTGAHCELDRRNQSNENEKIFIIRGNPEQVEHAKRIF 479
Query: 110 EELIDSVMVEQF 121
E + V + F
Sbjct: 480 SEKLGMVCLMMF 491
>gi|322790271|gb|EFZ15270.1| hypothetical protein SINV_11556 [Solenopsis invicta]
Length = 744
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/99 (56%), Positives = 68/99 (68%), Gaps = 14/99 (14%)
Query: 22 NFGNMREFNE---NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARV 78
N+ N FN N DG ++V VP+AAVGVVIGKGGDMIKK+Q E+GA+V
Sbjct: 296 NYSNDSGFNHGPANSDG-----------VEVLVPRAAVGVVIGKGGDMIKKIQAESGAKV 344
Query: 79 QFVQMREDDPSDRRCMLSGSPDQVQEARARIEELIDSVM 117
QF Q RED P DR+C+LSG V++AR RI+ELIDSVM
Sbjct: 345 QFQQGREDGPGDRKCLLSGKHQAVEQARQRIQELIDSVM 383
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 46/75 (61%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+++ +P VG++IGKGG+ IK+LQ ++GA++ +Q ++ ++G P +V+ A+
Sbjct: 203 VEIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQEQEKPLRITGDPQKVEYAK 262
Query: 107 ARIEELIDSVMVEQF 121
+ ELI ++ F
Sbjct: 263 QLVYELIAEKEMQMF 277
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 51/88 (57%), Gaps = 10/88 (11%)
Query: 35 GRGGMWEVTWEVIQVC-----VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS 89
G+G +V+ + +C VP VG++IG+GG+ I +LQ+ETG ++Q P
Sbjct: 86 GQGSRPQVSSNLGGICNEDIRVPDKMVGLIIGRGGEQITRLQSETGCKIQMAPESGGLP- 144
Query: 90 DRRCMLSGSPDQVQEARARIEELIDSVM 117
+R C L+GS +EA R +EL+ S++
Sbjct: 145 ERVCTLTGS----REAVNRAKELVLSIV 168
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 38/57 (66%)
Query: 50 CVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
VP + G++IGKGG+ IK++ +TGA + + + + +++ ++ G+P+QV+ A+
Sbjct: 432 TVPSSKCGIIIGKGGETIKQINQQTGAHCELDRKNQSNENEKIFIIRGNPEQVEHAK 488
>gi|332023471|gb|EGI63714.1| Far upstream element-binding protein 1 [Acromyrmex echinatior]
Length = 731
Score = 105 bits (261), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 73/116 (62%), Gaps = 14/116 (12%)
Query: 5 EFQQSRRWQQGIGRNNDNFGNMREFNE---NGDGRGGMWEVTWEVIQVCVPKAAVGVVIG 61
E Q R +G N+ N FN N DG ++V VP+AAVGVVIG
Sbjct: 266 EIQMFHRGGRGATDRTGNYSNDSGFNHGPANSDG-----------VEVLVPRAAVGVVIG 314
Query: 62 KGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELIDSVM 117
KGGDMIKK+Q E+GA+VQF Q RE+ P DR+C+LSG V++AR RI+ELIDSVM
Sbjct: 315 KGGDMIKKIQAESGAKVQFQQGREEGPGDRKCLLSGKHQAVEQARQRIQELIDSVM 370
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 46/75 (61%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+++ +P VG++IGKGG+ IK+LQ ++GA++ +Q ++ ++G P +V+ A+
Sbjct: 196 VEIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQEQEKPLRITGDPQKVEYAK 255
Query: 107 ARIEELIDSVMVEQF 121
+ ELI ++ F
Sbjct: 256 QLVYELIAEKEIQMF 270
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Query: 15 GIGRNNDNFGNMREFNENG--DGR-GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQ 71
G G + FG R NE G D R GG + E VP + G++IGKGG+ IK++
Sbjct: 383 GSGPRGNGFGGNRNPNEYGTWDRRQGGPMQDKIETT-FTVPSSKCGIIIGKGGETIKQIN 441
Query: 72 NETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+TGA + + + + +++ ++ G+P+QV+ A+
Sbjct: 442 QQTGAHCELDRRNQSNENEKIFIIRGNPEQVEHAK 476
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ VP VG++IG+GG+ I +LQ ETG ++Q P +R C L+GS +EA R
Sbjct: 105 IRVPDKMVGLIIGRGGEQITRLQTETGCKIQMAPESGGLP-ERVCTLTGS----REAVNR 159
Query: 109 IEELIDSVM 117
+EL+ S++
Sbjct: 160 AKELVLSIV 168
>gi|328708265|ref|XP_001949890.2| PREDICTED: far upstream element-binding protein 1-like
[Acyrthosiphon pisum]
Length = 767
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 59/71 (83%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
++V VPK VG+VIGKGGDMIKK+Q +TGA+VQF+ + ED P DRRC+++G+PDQV EA+
Sbjct: 308 VEVGVPKQVVGLVIGKGGDMIKKIQADTGAKVQFINLNEDTPDDRRCLITGNPDQVAEAK 367
Query: 107 ARIEELIDSVM 117
RIE L+DS +
Sbjct: 368 QRIESLVDSAL 378
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 50/85 (58%), Gaps = 10/85 (11%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP----SDRRCMLSGSPDQVQ 103
Q+ +P A VG++IGKGG+ IK LQ +GA++ +Q D P +++ +SG +V+
Sbjct: 207 QIMIPGAKVGLIIGKGGETIKMLQESSGAKMIVIQ---DGPNSQENEKPLRISGETAKVE 263
Query: 104 EARARIEELIDSVMVEQFSGANFDK 128
A+ + +++ ++ +NFD+
Sbjct: 264 HAKKLVYDMLGG---DKDGSSNFDQ 285
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 39/64 (60%)
Query: 50 CVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARI 109
VP A GV+IGKGG+ IK++ +TGA + + + S++ ++ G+ +Q++ A+ I
Sbjct: 417 TVPSAKCGVIIGKGGETIKQINMQTGAHCEIDRRHNNTGSEKTFVIRGTTEQIENAKRMI 476
Query: 110 EELI 113
E +
Sbjct: 477 NEKL 480
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 55/119 (46%), Gaps = 26/119 (21%)
Query: 14 QGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNE 73
QGIG FGN+ NE ++ VP VG + +GG I +LQ E
Sbjct: 97 QGIGGPGSQFGNV--INE----------------EIKVPDKMVG--LSRGGGQISRLQAE 136
Query: 74 TGARVQFVQMREDDPS--DRRCMLSGSPDQVQEARARIEELI-DSVMVEQFSGANFDKL 129
TG + +QM D P +R C L+G+ + A+ I+ ++ + V VE GA + L
Sbjct: 137 TGCK---IQMAPDSPGLLERSCTLTGNAQSITLAKELIQNIVQNKVSVEGTGGAKIEGL 192
>gi|242022794|ref|XP_002431823.1| far upstream fuse binding protein, putative [Pediculus humanus
corporis]
gi|212517155|gb|EEB19085.1| far upstream fuse binding protein, putative [Pediculus humanus
corporis]
Length = 708
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/96 (54%), Positives = 71/96 (73%), Gaps = 9/96 (9%)
Query: 21 DNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQF 80
+NF N EF+ N GG VI++ VP+AAVGVVIGKGG+MIKK+Q+ TGA++QF
Sbjct: 250 NNFSN--EFDNNSQPGGG-------VIEILVPRAAVGVVIGKGGEMIKKIQSSTGAKLQF 300
Query: 81 VQMREDDPSDRRCMLSGSPDQVQEARARIEELIDSV 116
Q R+D P DR+C+L+G P+Q ++AR ++ ELIDSV
Sbjct: 301 EQGRDDGPGDRKCILTGKPEQCEDAREKVIELIDSV 336
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
++ +P VG+VIGKGG+ IK LQ+ TGAR+ VQ ++ ++G+ QV A+
Sbjct: 156 EIMIPGPKVGLVIGKGGETIKHLQDTTGARMVVVQDSNSQDYEKPLRITGTQQQVDHAKD 215
Query: 108 RIEELI 113
+ ++I
Sbjct: 216 LVYQMI 221
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
++ VP VG++IG+GG+ I +LQ E+G ++Q + R +R+C L+G+ + + AR
Sbjct: 48 EIMVPDKIVGLIIGRGGEQITRLQFESGCKIQMERSRGT--VERQCTLTGTREAINRARE 105
Query: 108 RIEELIDSVM 117
+ ++ +++
Sbjct: 106 MVMNIVSTLI 115
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQF-VQMREDDPSDRRCMLSGSPDQVQEA 105
I VP G VIGKGG+ IK++ + GA + ++ +P+++ ++ G+P+Q++EA
Sbjct: 387 ITFAVPANRAGFVIGKGGEKIKQINAQCGAYCEIDRKLSSVNPAEKVFVIRGTPEQIEEA 446
Query: 106 RARIEELIDSVMVEQFSG 123
+ I I+ +E + G
Sbjct: 447 KRLI---IEYSGIEDYYG 461
>gi|321477777|gb|EFX88735.1| hypothetical protein DAPPUDRAFT_311062 [Daphnia pulex]
Length = 727
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 45/72 (62%), Positives = 62/72 (86%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
++V VP++AVGVVIGK G+MIKK+QNETGARVQF Q R+D+P +R C L+G+ +Q+++AR
Sbjct: 273 MEVAVPRSAVGVVIGKNGEMIKKIQNETGARVQFQQGRDDNPEERMCALTGTMNQIEDAR 332
Query: 107 ARIEELIDSVMV 118
RIEELI+SV+
Sbjct: 333 QRIEELIESVLA 344
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 16/106 (15%)
Query: 21 DNFGNMREFNENGDGRGGMWEVTWEVI---------QVCVPKAAVGVVIGKGGDMIKKLQ 71
D FG +R + GRG M + + +V VP VG++IG+GG+ I +LQ
Sbjct: 88 DPFGALR--SPGMQGRGPMMGMPAASMMNLGPISTEEVAVPDKMVGLIIGRGGEQISRLQ 145
Query: 72 NETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELIDSVM 117
E+GA++Q P DR C ++GS +EA R ELI++++
Sbjct: 146 AESGAKIQMAPDSAGLP-DRTCTITGS----REAIGRARELINNIV 186
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 36 RGGMWEVTWEVIQ--VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRC 93
RGG + ++ V +P VG++IGKGG+ IK+LQ +G R+ VQ +++
Sbjct: 189 RGGPRDAGPPSVESLVMIPGPKVGLIIGKGGETIKQLQERSGTRMVVVQDGPQQENEKPL 248
Query: 94 MLSGSPDQVQEARARIEELI 113
+ G P +V+ A+ + +LI
Sbjct: 249 RIYGDPQKVEHAKQLVYDLI 268
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 40/66 (60%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
Q VP G++IGKGG+ IK++ ++GA + + +P+++ ++ GS +QV+ A+
Sbjct: 412 QFLVPSTKTGIIIGKGGETIKQINQQSGAFCELDRRPPPNPNEKIFIIRGSHEQVELAKR 471
Query: 108 RIEELI 113
I E +
Sbjct: 472 MISEKL 477
>gi|157115057|ref|XP_001652539.1| far upstream (fuse) binding protein [Aedes aegypti]
gi|108877073|gb|EAT41298.1| AAEL007042-PC [Aedes aegypti]
Length = 715
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 57/72 (79%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E +V VPK+AVGVVIGKGGDMIKK+Q ++G ++QF+Q R D P DRRC++ GS QV+E
Sbjct: 246 EQAEVFVPKSAVGVVIGKGGDMIKKIQGDSGCKLQFIQGRGDGPGDRRCIVQGSRAQVEE 305
Query: 105 ARARIEELIDSV 116
+ IEELI+SV
Sbjct: 306 GKRMIEELIESV 317
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 43/66 (65%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
++ +P + VG++IGKGG+ IK+LQ ++GA++ +Q ++ +SG P +V+ A+
Sbjct: 161 EIMIPGSKVGLIIGKGGETIKQLQEKSGAKMVIIQDGPGQEMEKPLRISGDPQKVEHAKQ 220
Query: 108 RIEELI 113
+ +LI
Sbjct: 221 LVFDLI 226
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
Query: 17 GRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGA 76
GR+N + GN ++ + G +VT E VP G++IG+GGD IK++ ++GA
Sbjct: 348 GRDNHDNGNNGQYGNDFSGP----QVTREEYTFTVPVNKCGIIIGRGGDTIKQINQQSGA 403
Query: 77 RVQFVQMREDDPSDRRCMLS-GSPDQVQEARARIEELID 114
+ + + ++ + + G P Q++EA+ I++ I+
Sbjct: 404 HTEMDRKASANQTNEKTFTTKGEPHQIEEAKRLIQDKIN 442
>gi|157115059|ref|XP_001652540.1| far upstream (fuse) binding protein [Aedes aegypti]
gi|157115061|ref|XP_001652541.1| far upstream (fuse) binding protein [Aedes aegypti]
gi|108877074|gb|EAT41299.1| AAEL007042-PA [Aedes aegypti]
gi|108877075|gb|EAT41300.1| AAEL007042-PB [Aedes aegypti]
Length = 706
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 57/72 (79%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E +V VPK+AVGVVIGKGGDMIKK+Q ++G ++QF+Q R D P DRRC++ GS QV+E
Sbjct: 246 EQAEVFVPKSAVGVVIGKGGDMIKKIQGDSGCKLQFIQGRGDGPGDRRCIVQGSRAQVEE 305
Query: 105 ARARIEELIDSV 116
+ IEELI+SV
Sbjct: 306 GKRMIEELIESV 317
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 43/66 (65%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
++ +P + VG++IGKGG+ IK+LQ ++GA++ +Q ++ +SG P +V+ A+
Sbjct: 161 EIMIPGSKVGLIIGKGGETIKQLQEKSGAKMVIIQDGPGQEMEKPLRISGDPQKVEHAKQ 220
Query: 108 RIEELI 113
+ +LI
Sbjct: 221 LVFDLI 226
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
Query: 17 GRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGA 76
GR+N + GN ++ + G +VT E VP G++IG+GGD IK++ ++GA
Sbjct: 348 GRDNHDNGNNGQYGNDFSGP----QVTREEYTFTVPVNKCGIIIGRGGDTIKQINQQSGA 403
Query: 77 RVQFVQMREDDPSDRRCMLS-GSPDQVQEARARIEELID 114
+ + + ++ + + G P Q++EA+ I++ I+
Sbjct: 404 HTEMDRKASANQTNEKTFTTKGEPHQIEEAKRLIQDKIN 442
>gi|158297666|ref|XP_317858.4| AGAP011446-PA [Anopheles gambiae str. PEST]
gi|157014686|gb|EAA13030.4| AGAP011446-PA [Anopheles gambiae str. PEST]
Length = 725
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/73 (58%), Positives = 57/73 (78%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E +V VPKAAVGVVIGKGG+MIKK+Q E+G ++QF+Q R D DRRC++ GS QV+E
Sbjct: 260 EQAEVFVPKAAVGVVIGKGGEMIKKIQGESGCKLQFIQGRGDGAGDRRCIVQGSKAQVEE 319
Query: 105 ARARIEELIDSVM 117
+ +E+LIDSV+
Sbjct: 320 GKRMVEDLIDSVL 332
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 44/66 (66%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
++ +P + VG++IGKGG+ IK+LQ +TGA++ +Q ++ +SG P +V++A+
Sbjct: 179 EMMIPGSKVGLIIGKGGETIKQLQEKTGAKMVIIQDGPGQEMEKPLRISGDPAKVEQAKQ 238
Query: 108 RIEELI 113
+ ELI
Sbjct: 239 LVYELI 244
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 50 CVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRE-DDPSDRRCMLSGSPDQVQEARAR 108
VP + G++IG+GGD IK++ ++GA + + + +++ G QV EA+
Sbjct: 389 TVPVSKCGIIIGRGGDTIKQINQQSGAHTEMDRKASLNQTTEKTFTCKGEQHQVDEAKRL 448
Query: 109 IEELID 114
I++ I+
Sbjct: 449 IQDKIN 454
>gi|427788843|gb|JAA59873.1| Putative kh-type splicing regulatory protein [Rhipicephalus
pulchellus]
Length = 753
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 54/70 (77%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
+V VPK AVGVVIGK GDMIK++Q ETGARVQF Q ++D+ DR C+L+G PDQV A +
Sbjct: 301 EVLVPKQAVGVVIGKQGDMIKRIQQETGARVQFQQPQDDNAPDRVCLLTGGPDQVHHAAS 360
Query: 108 RIEELIDSVM 117
I ELI SV+
Sbjct: 361 FIGELIQSVL 370
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+Q VP G+VIGKGG+ I+++ ++GA V+ + +P ++ ++ G+P Q++ A+
Sbjct: 434 VQYTVPANKCGLVIGKGGEAIRQINQQSGAHVELSRAPPPNPVEKVFIIRGNPQQIEHAQ 493
Query: 107 ARIEELI 113
I E I
Sbjct: 494 QLINERI 500
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 20 NDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQ 79
ND FG + RG + V + VP VG++IG+GG+ I +LQ E+G +
Sbjct: 78 NDPFG--AQLAALAQQRGSLANAAPAVEEWSVPDKMVGLIIGRGGEQISRLQAESGCK-- 133
Query: 80 FVQMRED--DPSDRRCMLSGSPDQVQEARARIEELI 113
+QM D S+R C L+G +++A+ I ++I
Sbjct: 134 -IQMAPDCGGMSERPCTLTGPRHAIEKAKEMINQII 168
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS----DRRCMLSGSPDQ 101
V+++ VP VG+VIGKGG+ I+ LQ ++ +Q D P D+ ++G +
Sbjct: 183 VVELMVPGPRVGLVIGKGGETIRGLQERANVKMVMIQ---DGPQQSMMDKPLRITGEKSK 239
Query: 102 VQEARARIEELIDSVMVE 119
+ A+ + +LI +E
Sbjct: 240 CEYAKRLVLDLITEKELE 257
>gi|427792821|gb|JAA61862.1| Putative kh-type splicing regulatory protein, partial
[Rhipicephalus pulchellus]
Length = 680
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 54/70 (77%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
+V VPK AVGVVIGK GDMIK++Q ETGARVQF Q ++D+ DR C+L+G PDQV A +
Sbjct: 236 EVLVPKQAVGVVIGKQGDMIKRIQQETGARVQFQQPQDDNAPDRVCLLTGGPDQVHHAAS 295
Query: 108 RIEELIDSVM 117
I ELI SV+
Sbjct: 296 FIGELIQSVL 305
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+Q VP G+VIGKGG+ I+++ ++GA V+ + +P ++ ++ G+P Q++ A+
Sbjct: 369 VQYTVPANKCGLVIGKGGEAIRQINQQSGAHVELSRAPPPNPVEKVFIIRGNPQQIEHAQ 428
Query: 107 ARIEELI 113
I E I
Sbjct: 429 QLINERI 435
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 20 NDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQ 79
ND FG + RG + V + VP VG++IG+GG+ I +LQ E+G +
Sbjct: 13 NDPFG--AQLAALAQQRGSLANAAPAVEEWSVPDKMVGLIIGRGGEQISRLQAESGCK-- 68
Query: 80 FVQMRED--DPSDRRCMLSGSPDQVQEARARIEELI 113
+QM D S+R C L+G +++A+ I ++I
Sbjct: 69 -IQMAPDCGGMSERPCTLTGPRHAIEKAKEMINQII 103
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS----DRRCMLSGSPDQ 101
V+++ VP VG+VIGKGG+ I+ LQ ++ +Q D P D+ ++G +
Sbjct: 118 VVELMVPGPRVGLVIGKGGETIRGLQERANVKMVMIQ---DGPQQSMMDKPLRITGEKSK 174
Query: 102 VQEARARIEELIDSVMVE 119
+ A+ + +LI +E
Sbjct: 175 CEYAKRLVLDLITEKELE 192
>gi|312385967|gb|EFR30351.1| hypothetical protein AND_00126 [Anopheles darlingi]
Length = 1325
Score = 89.0 bits (219), Expect = 6e-16, Method: Composition-based stats.
Identities = 44/73 (60%), Positives = 58/73 (79%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E +V VPKAAVGVVIGKGG+MIKK+Q E+G ++QF+Q R D P DRRC++ G+ QV++
Sbjct: 859 EQAEVFVPKAAVGVVIGKGGEMIKKIQGESGCKLQFIQGRGDGPGDRRCIVLGTKAQVED 918
Query: 105 ARARIEELIDSVM 117
+ IEELIDSV+
Sbjct: 919 GKRMIEELIDSVL 931
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 43/66 (65%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
++ +P + VG++IGKGG+ IK+LQ +TGA++ +Q ++ +SG P +V+ A+
Sbjct: 778 EMMIPGSKVGLIIGKGGETIKQLQEKTGAKMVIIQDGPGQEMEKPLRISGDPQKVEHAKQ 837
Query: 108 RIEELI 113
+ ELI
Sbjct: 838 LVYELI 843
Score = 38.9 bits (89), Expect = 0.65, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQF-VQMREDDPSDRRCMLSGSPDQVQEARARI 109
VP + G++IG+GGD IK++ ++GA + + ++ +++ + G QV EA+ I
Sbjct: 986 VPVSKCGIIIGRGGDTIKQINQQSGAHTEMDRKASQNQTTEKTFICKGEQHQVDEAKRLI 1045
Query: 110 EELID 114
++ I+
Sbjct: 1046 QDKIN 1050
>gi|427792601|gb|JAA61752.1| Putative kh-type splicing regulatory protein, partial
[Rhipicephalus pulchellus]
Length = 454
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/70 (62%), Positives = 54/70 (77%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
+V VPK AVGVVIGK GDMIK++Q ETGARVQF Q ++D+ DR C+L+G PDQV A +
Sbjct: 189 EVLVPKQAVGVVIGKQGDMIKRIQQETGARVQFQQPQDDNAPDRVCLLTGGPDQVHHAAS 248
Query: 108 RIEELIDSVM 117
I ELI SV+
Sbjct: 249 FIGELIQSVL 258
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+Q VP G+VIGKGG+ I+++ ++GA V+ + +P ++ ++ G+P Q++ A+
Sbjct: 322 VQYTVPANKCGLVIGKGGEAIRQINQQSGAHVELSRAPPPNPVEKVFIIRGNPQQIEHAQ 381
Query: 107 ARIEELI 113
I E I
Sbjct: 382 QLINERI 388
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 5/58 (8%)
Query: 58 VVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCMLSGSPDQVQEARARIEELI 113
VIG+GG+ I +LQ E+G + +QM D S+R C L+G +++A+ I ++I
Sbjct: 2 AVIGRGGEQISRLQAESGCK---IQMAPDCGGMSERPCTLTGPRHAIEKAKEMINQII 56
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS----DRRCMLSGSPDQ 101
V+++ VP VG+VIGKGG+ I+ LQ ++ +Q D P D+ ++G +
Sbjct: 71 VVELMVPGPRVGLVIGKGGETIRGLQERANVKMVMIQ---DGPQQSMMDKPLRITGEKSK 127
Query: 102 VQEARARIEELIDSVMVE 119
+ A+ + +LI +E
Sbjct: 128 CEYAKRLVLDLITEKELE 145
>gi|242001078|ref|XP_002435182.1| KH domain RNA binding protein, putative [Ixodes scapularis]
gi|215498512|gb|EEC08006.1| KH domain RNA binding protein, putative [Ixodes scapularis]
Length = 609
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 55/71 (77%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
+V VPK AVGVVIGK GDMIK++Q ETGARVQF Q ++D+ DR C+L+G P+QV A +
Sbjct: 265 EVLVPKQAVGVVIGKQGDMIKRIQQETGARVQFQQPQDDNAPDRVCLLTGGPEQVHHAAS 324
Query: 108 RIEELIDSVMV 118
I ELI SV+V
Sbjct: 325 FIGELIQSVLV 335
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+Q VP G+VIGKGG+ I+++ ++GA V+ + +P ++ ++ G+P Q++ A+
Sbjct: 371 VQYTVPANKCGLVIGKGGEAIRQINQQSGAHVELSRAPPPNPVEKVFIIRGNPQQIEHAQ 430
Query: 107 ARIEELI 113
I E I
Sbjct: 431 QLINERI 437
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 38 GMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSG 97
G+W ++ +C VIG+GG+ I +LQ E+G ++Q P DR C L+G
Sbjct: 91 GVWGPLSDLCFLCA-------VIGRGGEQISRLQAESGCKIQMAPDCGGQP-DRPCTLTG 142
Query: 98 SPDQVQEARARIEELI 113
+++A+ I ++I
Sbjct: 143 PRHAIEKAKDMINQII 158
>gi|195382107|ref|XP_002049773.1| GJ21777 [Drosophila virilis]
gi|194144570|gb|EDW60966.1| GJ21777 [Drosophila virilis]
Length = 831
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/89 (49%), Positives = 63/89 (70%), Gaps = 6/89 (6%)
Query: 29 FNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP 88
FN +G GG E ++V VPK AVGVVIGKGGDMI+K+Q E G ++QF+Q + D+
Sbjct: 315 FNNFNNGSGG------ESVEVFVPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQGKNDEM 368
Query: 89 SDRRCMLSGSPDQVQEARARIEELIDSVM 117
DRRC++ G+ QV++A+ I+ LI++VM
Sbjct: 369 GDRRCVIQGTRQQVEDAKRTIDGLIENVM 397
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 43/66 (65%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
++ +P A VG+VIGKGGD IK+LQ +TGAR+ +Q + + +SG P +V+ A+
Sbjct: 222 EIMIPGAKVGLVIGKGGDTIKQLQEKTGARMIIIQDGPNQEVIKPLRISGVPQKVEHAKQ 281
Query: 108 RIEELI 113
+ +LI
Sbjct: 282 MVLDLI 287
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Query: 19 NNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARV 78
NN N+G N +GG E+T+ VP + G+VIG+GG+ IK + ++GA
Sbjct: 422 NNSNYGYGYGVNH---AQGGREEITF-----LVPASKCGIVIGRGGETIKLINQQSGAHT 473
Query: 79 QFVQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
+ + + P+++ G+ DQV+ AR I E I+
Sbjct: 474 EMDRNASNPPNEKLFKSKGTTDQVEAARQMISEKIN 509
>gi|195123153|ref|XP_002006073.1| GI18753 [Drosophila mojavensis]
gi|193911141|gb|EDW10008.1| GI18753 [Drosophila mojavensis]
Length = 828
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 57/73 (78%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E ++V VPK AVGVVIGKGGDMI+K+Q E G ++QF+Q + D+ DRRC++ G+ QV++
Sbjct: 320 ESVEVFVPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQGKNDEMGDRRCVIQGTRQQVED 379
Query: 105 ARARIEELIDSVM 117
A+ I+ LI++VM
Sbjct: 380 AKRTIDGLIENVM 392
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 43/66 (65%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
++ +P A VG+VIGKGGD IK+LQ +TGAR+ +Q + + +SG P +V+ A+
Sbjct: 216 EIMIPGAKVGLVIGKGGDTIKQLQEKTGARMIIIQDGPNQEVIKPLRISGVPQKVEHAKQ 275
Query: 108 RIEELI 113
+ +LI
Sbjct: 276 MVLDLI 281
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Query: 19 NNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARV 78
NN N+G N +GG E+T+ VP + G+VIG+GG+ IK + ++GA
Sbjct: 420 NNSNYGYGYGVNH---AQGGREEITF-----LVPASKCGIVIGRGGETIKLINQQSGAHT 471
Query: 79 QFVQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
+ + + P+++ G+ DQV+ AR I E I+
Sbjct: 472 EMDRNASNPPNEKLFKSKGTTDQVESARQMISEKIN 507
>gi|195431208|ref|XP_002063639.1| GK21314 [Drosophila willistoni]
gi|194159724|gb|EDW74625.1| GK21314 [Drosophila willistoni]
Length = 838
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 57/73 (78%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E ++V VPK AVGVVIGKGGDMI+K+Q E G ++QF+Q + D+ DRRC++ G+ QV++
Sbjct: 333 ESVEVFVPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQGKNDEMGDRRCVIQGTRQQVED 392
Query: 105 ARARIEELIDSVM 117
A+ I+ LI++VM
Sbjct: 393 AKRTIDGLIENVM 405
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 43/66 (65%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
++ +P A VG+VIGKGGD IK+LQ +TGA++ +Q + + +SG P +++ A+
Sbjct: 221 EIMIPGAKVGLVIGKGGDTIKQLQEKTGAKMIIIQDGPNQEVIKPLRISGDPQKIEHAKQ 280
Query: 108 RIEELI 113
+ +LI
Sbjct: 281 MVLDLI 286
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 36 RGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCML 95
+GG E+T+ VP + G+VIG+GG+ IK + ++GA + + + P+++
Sbjct: 445 QGGREEITF-----LVPASKCGIVIGRGGETIKLINQQSGAHTEMDRNATNRPNEKLFKS 499
Query: 96 SGSPDQVQEARARIEELID 114
G+ DQV+ AR I E I+
Sbjct: 500 KGTTDQVEAARQMISEKIN 518
>gi|195488051|ref|XP_002092151.1| GE14030 [Drosophila yakuba]
gi|194178252|gb|EDW91863.1| GE14030 [Drosophila yakuba]
Length = 802
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 57/73 (78%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E ++V VPK AVGVVIGKGGDMI+K+Q E G ++QF+Q + D+ DRRC++ G+ QV++
Sbjct: 314 ESVEVFVPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQGKNDEMGDRRCVIQGTRQQVED 373
Query: 105 ARARIEELIDSVM 117
A+ I+ LI++VM
Sbjct: 374 AKRTIDGLIENVM 386
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 42/66 (63%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
++ +P A VG+VIGKGGD IK+LQ +TGA++ +Q + + +SG +++ A+
Sbjct: 213 EIMIPGAKVGLVIGKGGDTIKQLQEKTGAKMIIIQDGPNQELIKPLRISGEAQKIEHAKQ 272
Query: 108 RIEELI 113
+ +LI
Sbjct: 273 MVLDLI 278
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 36 RGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCML 95
+GG E+T+ VP + G+VIG+GG+ IK + ++GA + + + P+++
Sbjct: 421 QGGREEITF-----LVPASKCGIVIGRGGETIKLINQQSGAHTEMDRNASNPPNEKLFKS 475
Query: 96 SGSPDQVQEARARIEELID 114
G+ DQV+ AR I E I+
Sbjct: 476 KGTTDQVEAARQMISEKIN 494
>gi|195155225|ref|XP_002018506.1| GL16727 [Drosophila persimilis]
gi|194114302|gb|EDW36345.1| GL16727 [Drosophila persimilis]
Length = 834
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 57/73 (78%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E ++V VPK AVGVVIGKGGDMI+K+Q E G ++QF+Q + D+ DRRC++ G+ QV++
Sbjct: 339 ESVEVFVPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQGKNDEMGDRRCVIQGTRQQVED 398
Query: 105 ARARIEELIDSVM 117
A+ I+ LI++VM
Sbjct: 399 AKRTIDGLIENVM 411
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 43/66 (65%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
++ +P A VG+VIGKGGD IK+LQ +TGA++ +Q + + +SG P +++ A+
Sbjct: 231 EIMIPGAKVGLVIGKGGDTIKQLQEKTGAKMIIIQDGPNQEVIKPLRISGDPQKIEHAKQ 290
Query: 108 RIEELI 113
+ +LI
Sbjct: 291 MVLDLI 296
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 36 RGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCML 95
+GG E+T+ VP + G+VIG+GG+ IK + ++GA + + + P+++
Sbjct: 445 QGGREEITF-----MVPASKCGIVIGRGGETIKLINQQSGAHTEMDRNASNPPNEKLFKS 499
Query: 96 SGSPDQVQEARARIEELID 114
G+ DQV+ AR I E I+
Sbjct: 500 KGTTDQVEAARQMISEKIN 518
>gi|194882397|ref|XP_001975298.1| GG22239 [Drosophila erecta]
gi|190658485|gb|EDV55698.1| GG22239 [Drosophila erecta]
Length = 801
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 57/73 (78%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E ++V VPK AVGVVIGKGGDMI+K+Q E G ++QF+Q + D+ DRRC++ G+ QV++
Sbjct: 316 ESVEVFVPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQGKNDEMGDRRCVIQGTRQQVED 375
Query: 105 ARARIEELIDSVM 117
A+ I+ LI++VM
Sbjct: 376 AKRTIDGLIENVM 388
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 42/66 (63%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
++ +P A VG+VIGKGGD IK+LQ +TGA++ +Q + + +SG +++ A+
Sbjct: 215 EIMIPGAKVGLVIGKGGDTIKQLQEKTGAKMIIIQDGPNQELIKPLRISGEAQKIEHAKQ 274
Query: 108 RIEELI 113
+ +LI
Sbjct: 275 MVLDLI 280
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 36 RGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCML 95
+GG E+T+ VP + G+VIG+GG+ IK + ++GA + + + P+++
Sbjct: 423 QGGREEITF-----LVPASKCGIVIGRGGETIKLINQQSGAHTEMDRNASNPPNEKLFKS 477
Query: 96 SGSPDQVQEARARIEELID 114
G+ DQV+ AR I E I+
Sbjct: 478 KGTTDQVEAARQMISEKIN 496
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%)
Query: 48 QVCVPKAAVGVVIGKGG-DMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
Q+ +P++ G +G+ D I +Q E+GA+VQ +Q + DR ML G D V + R
Sbjct: 125 QIRLPESVAGAFMGRASNDTITHIQAESGAKVQVMQDQ-----DRVIMLRGQRDTVTKGR 179
Query: 107 ARIEELID 114
I+ + +
Sbjct: 180 EMIQNMAN 187
>gi|198477401|ref|XP_002136631.1| GA27688 [Drosophila pseudoobscura pseudoobscura]
gi|198142923|gb|EDY71635.1| GA27688 [Drosophila pseudoobscura pseudoobscura]
Length = 836
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 57/73 (78%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E ++V VPK AVGVVIGKGGDMI+K+Q E G ++QF+Q + D+ DRRC++ G+ QV++
Sbjct: 339 ESVEVFVPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQGKNDEMGDRRCVIQGTRQQVED 398
Query: 105 ARARIEELIDSVM 117
A+ I+ LI++VM
Sbjct: 399 AKRTIDGLIENVM 411
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 43/66 (65%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
++ +P A VG+VIGKGGD IK+LQ +TGA++ +Q + + +SG P +++ A+
Sbjct: 231 EIMIPGAKVGLVIGKGGDTIKQLQEKTGAKMIIIQDGPNQEVIKPLRISGDPQKIEHAKQ 290
Query: 108 RIEELI 113
+ +LI
Sbjct: 291 MVLDLI 296
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 36 RGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCML 95
+GG E+T+ VP + G+VIG+GG+ IK + ++GA + + + P+++
Sbjct: 445 QGGREEITF-----MVPASKCGIVIGRGGETIKLINQQSGAHTEMDRNASNPPNEKLFKS 499
Query: 96 SGSPDQVQEARARIEELID 114
G+ DQV+ AR I E I+
Sbjct: 500 KGTTDQVEAARQMISEKIN 518
>gi|194756696|ref|XP_001960612.1| GF13443 [Drosophila ananassae]
gi|190621910|gb|EDV37434.1| GF13443 [Drosophila ananassae]
Length = 832
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 57/73 (78%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E ++V VPK AVGVVIGKGGDMI+K+Q E G ++QF+Q + D+ DRRC++ G+ QV++
Sbjct: 331 ESVEVFVPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQGKNDEMGDRRCVIQGTRQQVED 390
Query: 105 ARARIEELIDSVM 117
A+ I+ LI++VM
Sbjct: 391 AKRTIDGLIENVM 403
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 43/66 (65%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
++ +P A VG+VIGKGGD IK+LQ +TGA++ +Q + + +SG P +++ A+
Sbjct: 227 EIMIPGAKVGLVIGKGGDTIKQLQEKTGAKMIIIQEGPNQEVIKPLRISGDPQKIEHAKQ 286
Query: 108 RIEELI 113
+ +LI
Sbjct: 287 MVLDLI 292
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 8/95 (8%)
Query: 20 NDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQ 79
N N+G N +GG E+T+ VP + G+VIG+GG+ IK + ++GA +
Sbjct: 427 NSNYGYGYGVNH---AQGGREEITF-----LVPASKCGIVIGRGGETIKLINQQSGAHTE 478
Query: 80 FVQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
+ + P+++ G+ DQV+ AR I E I+
Sbjct: 479 MDRNASNPPNEKLFKSKGTTDQVEAARQMISEKIN 513
>gi|195025431|ref|XP_001986058.1| GH21156 [Drosophila grimshawi]
gi|193902058|gb|EDW00925.1| GH21156 [Drosophila grimshawi]
Length = 842
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 57/73 (78%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E ++V VPK AVGVVIGKGGDMI+K+Q E G ++QF+Q + D+ DRRC++ G+ QV++
Sbjct: 333 ESVEVFVPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQGKNDEMGDRRCVIQGTRQQVED 392
Query: 105 ARARIEELIDSVM 117
A+ I+ LI++VM
Sbjct: 393 AKRTIDGLIENVM 405
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 43/66 (65%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
++ +P A VG+VIGKGGD IK+LQ +TGAR+ +Q + + +SG P +V+ A+
Sbjct: 224 EIMIPGAKVGLVIGKGGDTIKQLQEKTGARMIIIQDGPNQEVIKPLRISGVPQKVEHAKQ 283
Query: 108 RIEELI 113
+ +LI
Sbjct: 284 MVLDLI 289
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 8/93 (8%)
Query: 22 NFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFV 81
N+G N +GG E+T+ VP + G+VIG+GG+ IK + ++GA +
Sbjct: 433 NYGYGYGVNH---AQGGREEITF-----LVPASKCGIVIGRGGETIKLINQQSGAHTEMD 484
Query: 82 QMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
+ + P+++ GS DQV+ AR I E I+
Sbjct: 485 RNASNPPNEKLFKSKGSTDQVEAARQMISEKIN 517
>gi|3929697|emb|CAA21318.1| EG:EG0003.2 [Drosophila melanogaster]
Length = 806
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 56/74 (75%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E +V VPK AVGVVIGKGGDMI+K+Q E G ++QF+Q + D+ DRRC++ G+ QV +
Sbjct: 329 ESTEVFVPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQGKNDEMGDRRCVIQGTRQQVDD 388
Query: 105 ARARIEELIDSVMV 118
A+ I+ LI++VMV
Sbjct: 389 AKRTIDGLIENVMV 402
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 42/66 (63%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
++ +P A VG+VIGKGGD IK+LQ +TGA++ +Q + + +SG +++ A+
Sbjct: 228 EIMIPGAKVGLVIGKGGDTIKQLQEKTGAKMIIIQDGPNQELIKPLRISGEAQKIEHAKQ 287
Query: 108 RIEELI 113
+ +LI
Sbjct: 288 MVLDLI 293
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 34/57 (59%)
Query: 58 VVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
+VIG+GG+ IK + ++GA + + + P+++ G+ DQV+ AR I E I+
Sbjct: 449 IVIGRGGETIKLINQQSGAHTEMDRNASNPPNEKLFKSKGTTDQVEAARQMISEKIN 505
>gi|429892650|gb|AGA18870.1| P-element somatic inhibitor [Drosophila melanogaster]
Length = 716
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 55/73 (75%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E +V VPK AVGVVIGKGGDMI+K+Q E G ++QF+Q + D+ DRRC++ G+ QV +
Sbjct: 236 ESTEVFVPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQGKNDEMGDRRCVIQGTRQQVDD 295
Query: 105 ARARIEELIDSVM 117
A+ I+ LI++VM
Sbjct: 296 AKRTIDGLIENVM 308
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 42/66 (63%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
++ +P A VG+VIGKGGD IK+LQ +TGA++ +Q + + +SG +++ A+
Sbjct: 135 EIMIPGAKVGLVIGKGGDTIKQLQEKTGAKMIIIQDGPNQELIKPLRISGEAQKIEHAKQ 194
Query: 108 RIEELI 113
+ +LI
Sbjct: 195 MVLDLI 200
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 36 RGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCML 95
+GG E+T+ VP + G+VIG+GG+ IK + ++GA + + + P+++
Sbjct: 343 QGGREEITF-----LVPASKCGIVIGRGGETIKLINQQSGAHTEMDRNASNPPNEKLFKS 397
Query: 96 SGSPDQVQEARARIEELID 114
G+ DQV+ AR I E I+
Sbjct: 398 KGTTDQVEAARQMISEKIN 416
>gi|429892664|gb|AGA18877.1| P-element somatic inhibitor [Drosophila melanogaster]
Length = 716
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 55/73 (75%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E +V VPK AVGVVIGKGGDMI+K+Q E G ++QF+Q + D+ DRRC++ G+ QV +
Sbjct: 236 ESTEVFVPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQGKNDEMGDRRCVIQGTRQQVDD 295
Query: 105 ARARIEELIDSVM 117
A+ I+ LI++VM
Sbjct: 296 AKRTIDGLIENVM 308
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 42/66 (63%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
++ +P A VG+VIGKGGD IK+LQ +TGA++ +Q + + +SG +++ A+
Sbjct: 135 EIMIPGAKVGLVIGKGGDTIKQLQEKTGAKMIIIQDGPNQELIKPLRISGEAQKIEHAKQ 194
Query: 108 RIEELI 113
+ +LI
Sbjct: 195 MVLDLI 200
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 36 RGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCML 95
+GG E+T+ VP + G+VIG+GG+ IK + ++GA + + + P+++
Sbjct: 343 QGGREEITF-----LVPASKCGIVIGRGGETIKLINQQSGAHTEMDRNASNPPNEKLFKS 397
Query: 96 SGSPDQVQEARARIEELID 114
G+ DQV+ AR I E I+
Sbjct: 398 KGTTDQVEAARQMISEKIN 416
>gi|17137136|ref|NP_477123.1| P-element somatic inhibitor, isoform B [Drosophila melanogaster]
gi|994900|gb|AAB50636.1| PSI [Drosophila sp.]
gi|21645257|gb|AAF57942.2| P-element somatic inhibitor, isoform B [Drosophila melanogaster]
gi|162944872|gb|ABY20505.1| LD35640p [Drosophila melanogaster]
Length = 796
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 55/73 (75%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E +V VPK AVGVVIGKGGDMI+K+Q E G ++QF+Q + D+ DRRC++ G+ QV +
Sbjct: 316 ESTEVFVPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQGKNDEMGDRRCVIQGTRQQVDD 375
Query: 105 ARARIEELIDSVM 117
A+ I+ LI++VM
Sbjct: 376 AKRTIDGLIENVM 388
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 42/66 (63%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
++ +P A VG+VIGKGGD IK+LQ +TGA++ +Q + + +SG +++ A+
Sbjct: 215 EIMIPGAKVGLVIGKGGDTIKQLQEKTGAKMIIIQDGPNQELIKPLRISGEAQKIEHAKQ 274
Query: 108 RIEELI 113
+ +LI
Sbjct: 275 MVLDLI 280
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 36 RGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCML 95
+GG E+T+ VP + G+VIG+GG+ IK + ++GA + + + P+++
Sbjct: 423 QGGREEITF-----LVPASKCGIVIGRGGETIKLINQQSGAHTEMDRNASNPPNEKLFKS 477
Query: 96 SGSPDQVQEARARIEELID 114
G+ DQV+ AR I E I+
Sbjct: 478 KGTTDQVEAARQMISEKIN 496
>gi|429892660|gb|AGA18875.1| P-element somatic inhibitor [Drosophila melanogaster]
Length = 716
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 55/73 (75%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E +V VPK AVGVVIGKGGDMI+K+Q E G ++QF+Q + D+ DRRC++ G+ QV +
Sbjct: 236 ESTEVFVPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQGKNDEMGDRRCVIQGTRQQVDD 295
Query: 105 ARARIEELIDSVM 117
A+ I+ LI++VM
Sbjct: 296 AKRTIDGLIENVM 308
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 42/66 (63%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
++ +P A VG+VIGKGGD IK+LQ +TGA++ +Q + + +SG +++ A+
Sbjct: 135 EIMIPGAKVGLVIGKGGDTIKQLQEKTGAKMIIIQDGPNQELIKPLRISGEAQKIEHAKQ 194
Query: 108 RIEELI 113
+ +LI
Sbjct: 195 MVLDLI 200
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 36 RGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCML 95
+GG E+T+ VP + G+VIG+GG+ IK + ++GA + + + P+++
Sbjct: 343 QGGREEITF-----LVPASKCGIVIGRGGETIKLINQQSGAHTEMDRNASNPPNEKLFKS 397
Query: 96 SGSPDQVQEARARIEELID 114
G+ DQV+ AR I E I+
Sbjct: 398 KGTTDQVEAARQMISEKIN 416
>gi|45551107|ref|NP_725623.2| P-element somatic inhibitor, isoform A [Drosophila melanogaster]
gi|45445515|gb|AAM70893.2| P-element somatic inhibitor, isoform A [Drosophila melanogaster]
Length = 716
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 55/73 (75%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E +V VPK AVGVVIGKGGDMI+K+Q E G ++QF+Q + D+ DRRC++ G+ QV +
Sbjct: 236 ESTEVFVPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQGKNDEMGDRRCVIQGTRQQVDD 295
Query: 105 ARARIEELIDSVM 117
A+ I+ LI++VM
Sbjct: 296 AKRTIDGLIENVM 308
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 42/66 (63%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
++ +P A VG+VIGKGGD IK+LQ +TGA++ +Q + + +SG +++ A+
Sbjct: 135 EIMIPGAKVGLVIGKGGDTIKQLQEKTGAKMIIIQDGPNQELIKPLRISGEAQKIEHAKQ 194
Query: 108 RIEELI 113
+ +LI
Sbjct: 195 MVLDLI 200
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 36 RGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCML 95
+GG E+T+ VP + G+VIG+GG+ IK + ++GA + + + P+++
Sbjct: 343 QGGREEITF-----LVPASKCGIVIGRGGETIKLINQQSGAHTEMDRNASNPPNEKLFKS 397
Query: 96 SGSPDQVQEARARIEELID 114
G+ DQV+ AR I E I+
Sbjct: 398 KGTTDQVEAARQMISEKIN 416
>gi|45552675|ref|NP_995862.1| P-element somatic inhibitor, isoform C [Drosophila melanogaster]
gi|45445514|gb|AAS64831.1| P-element somatic inhibitor, isoform C [Drosophila melanogaster]
Length = 797
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 55/73 (75%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E +V VPK AVGVVIGKGGDMI+K+Q E G ++QF+Q + D+ DRRC++ G+ QV +
Sbjct: 316 ESTEVFVPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQGKNDEMGDRRCVIQGTRQQVDD 375
Query: 105 ARARIEELIDSVM 117
A+ I+ LI++VM
Sbjct: 376 AKRTIDGLIENVM 388
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 42/66 (63%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
++ +P A VG+VIGKGGD IK+LQ +TGA++ +Q + + +SG +++ A+
Sbjct: 215 EIMIPGAKVGLVIGKGGDTIKQLQEKTGAKMIIIQDGPNQELIKPLRISGEAQKIEHAKQ 274
Query: 108 RIEELI 113
+ +LI
Sbjct: 275 MVLDLI 280
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 36 RGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCML 95
+GG E+T+ VP + G+VIG+GG+ IK + ++GA + + + P+++
Sbjct: 423 QGGREEITF-----LVPASKCGIVIGRGGETIKLINQQSGAHTEMDRNASNPPNEKLFKS 477
Query: 96 SGSPDQVQEARARIEELID 114
G+ DQV+ AR I E I+
Sbjct: 478 KGTTDQVEAARQMISEKIN 496
>gi|15292111|gb|AAK93324.1| LD38872p [Drosophila melanogaster]
Length = 661
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 55/73 (75%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E +V VPK AVGVVIGKGGDMI+K+Q E G ++QF+Q + D+ DRRC++ G+ QV +
Sbjct: 180 ESTEVFVPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQGKNDEMGDRRCVIQGTRQQVDD 239
Query: 105 ARARIEELIDSVM 117
A+ I+ LI++VM
Sbjct: 240 AKRTIDGLIENVM 252
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 42/66 (63%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
++ +P A VG+VIGKGGD IK+LQ +TGA++ +Q + + +SG +++ A+
Sbjct: 79 EIMIPGAKVGLVIGKGGDTIKQLQEKTGAKMIIIQDGPNQELIKPLRISGEAQKIEHAKQ 138
Query: 108 RIEELI 113
+ +LI
Sbjct: 139 MVLDLI 144
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 36 RGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCML 95
+GG E+T+ VP + G+VIG+GG+ IK + ++GA + + + P+++
Sbjct: 287 QGGREEITF-----LVPASKCGIVIGRGGETIKLINQQSGAHTEMDRNASNPPNEKLFKS 341
Query: 96 SGSPDQVQEARARIEELID 114
G+ DQV+ AR I E I+
Sbjct: 342 KGTTDQVEAARQMISEKIN 360
>gi|429892656|gb|AGA18873.1| P-element somatic inhibitor [Drosophila melanogaster]
Length = 716
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 55/73 (75%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E +V VPK AVGVVIGKGGDMI+K+Q E G ++QF+Q + D+ DRRC++ G+ QV +
Sbjct: 236 ESTEVFVPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQGKNDEMGDRRCVIQGTRQQVDD 295
Query: 105 ARARIEELIDSVM 117
A+ I+ LI++VM
Sbjct: 296 AKRTIDGLIENVM 308
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 42/66 (63%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
++ +P A VG+VIGKGGD IK+LQ +TGA++ +Q + + +SG +++ A+
Sbjct: 135 EIMIPGAKVGLVIGKGGDTIKQLQEKTGAKMIIIQDGPNQELIKPLRISGEAQKIEHAKQ 194
Query: 108 RIEELI 113
+ +LI
Sbjct: 195 MVLDLI 200
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 36 RGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCML 95
+GG E+T+ VP + G+VIG+GG+ IK + ++GA + + + P+++
Sbjct: 343 QGGREEITF-----LVPASKCGIVIGRGGETIKLINQQSGAHTEMDRNASNPPNEKLFKS 397
Query: 96 SGSPDQVQEARARIEELID 114
G+ DQV+ AR I E I+
Sbjct: 398 KGTTDQVEAARQMISEKIN 416
>gi|429892662|gb|AGA18876.1| P-element somatic inhibitor [Drosophila melanogaster]
Length = 716
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 55/73 (75%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E +V VPK AVGVVIGKGGDMI+K+Q E G ++QF+Q + D+ DRRC++ G+ QV +
Sbjct: 236 ESTEVFVPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQGKNDEMGDRRCVIQGTRQQVDD 295
Query: 105 ARARIEELIDSVM 117
A+ I+ LI++VM
Sbjct: 296 AKRTIDGLIENVM 308
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 42/66 (63%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
++ +P A VG+VIGKGGD IK+LQ +TGA++ +Q + + +SG +++ A+
Sbjct: 135 EIMIPGAKVGLVIGKGGDTIKQLQEKTGAKMIIIQDGPNQELIKPLRISGEAQKIEHAKQ 194
Query: 108 RIEELI 113
+ +LI
Sbjct: 195 MVLDLI 200
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 36 RGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCML 95
+GG E+T+ VP + G+VIG+GG+ IK + ++GA + + + P+++
Sbjct: 343 QGGREEITF-----LVPASKCGIVIGRGGETIKLINQQSGAHTEMDRNASNPPNEKLFKS 397
Query: 96 SGSPDQVQEARARIEELID 114
G+ DQV+ AR I E I+
Sbjct: 398 KGTTDQVEAARQMISEKIN 416
>gi|429892658|gb|AGA18874.1| P-element somatic inhibitor [Drosophila melanogaster]
Length = 716
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 55/73 (75%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E +V VPK AVGVVIGKGGDMI+K+Q E G ++QF+Q + D+ DRRC++ G+ QV +
Sbjct: 236 ESTEVFVPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQGKNDEMGDRRCVIQGTRQQVDD 295
Query: 105 ARARIEELIDSVM 117
A+ I+ LI++VM
Sbjct: 296 AKRTIDGLIENVM 308
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 42/66 (63%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
++ +P A VG+VIGKGGD IK+LQ +TGA++ +Q + + +SG +++ A+
Sbjct: 135 EIMIPGAKVGLVIGKGGDTIKQLQEKTGAKMIIIQDGPNQELIKPLRISGEAQKIEHAKQ 194
Query: 108 RIEELI 113
+ +LI
Sbjct: 195 MVLDLI 200
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 36 RGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCML 95
+GG E+T+ VP + G+VIG+GG+ IK + ++GA + + + P+++
Sbjct: 343 QGGREEITF-----LVPASKCGIVIGRGGETIKLINQQSGAHTEMDRNASNPPNEKLFKS 397
Query: 96 SGSPDQVQEARARIEELID 114
G+ DQV+ AR I E I+
Sbjct: 398 KGTTDQVEAARQMISEKIN 416
>gi|429892652|gb|AGA18871.1| P-element somatic inhibitor [Drosophila melanogaster]
Length = 716
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 55/73 (75%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E +V VPK AVGVVIGKGGDMI+K+Q E G ++QF+Q + D+ DRRC++ G+ QV +
Sbjct: 236 ESTEVFVPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQGKNDEMGDRRCVIQGTRQQVDD 295
Query: 105 ARARIEELIDSVM 117
A+ I+ LI++VM
Sbjct: 296 AKRTIDGLIENVM 308
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
++ +P A VG+VIGKGGD IK+LQ +TGA++ +Q + + +SG +++ A+
Sbjct: 135 EIMIPGAKVGLVIGKGGDTIKQLQEKTGAKMIIIQDGPNQELIKPLRISGEAQKIEHAKQ 194
Query: 108 RIEELI 113
+LI
Sbjct: 195 MXLDLI 200
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 36 RGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCML 95
+GG E+T+ VP + G+VIG+GG+ IK + ++GA + + + P+++
Sbjct: 343 QGGREEITF-----LVPASKCGIVIGRGGETIKLINQQSGAHTEMDRNASNPPNEKLFKS 397
Query: 96 SGSPDQVQEARARIEELID 114
G+ DQV+ AR I E I+
Sbjct: 398 KGTTDQVEAARQMISEKIN 416
>gi|429892654|gb|AGA18872.1| P-element somatic inhibitor [Drosophila melanogaster]
Length = 716
Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 55/73 (75%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E +V VPK AVGVVIGKGGDMI+K+Q E G ++QF+Q + D+ DRRC++ G+ QV +
Sbjct: 236 ESTEVFVPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQGKNDEMGDRRCVIQGTRQQVDD 295
Query: 105 ARARIEELIDSVM 117
A+ I+ LI++VM
Sbjct: 296 AKRTIDGLIENVM 308
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 42/66 (63%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
++ +P A VG+VIGKGGD IK+LQ +TGA++ +Q + + +SG +++ A+
Sbjct: 135 EIMIPGAKVGLVIGKGGDTIKQLQEKTGAKMIIIQDGPNQELIKPLRISGEAQKIEHAKQ 194
Query: 108 RIEELI 113
+ +LI
Sbjct: 195 MVLDLI 200
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 36 RGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCML 95
+GG E+T+ VP + G+VIG+GG+ IK + ++GA + + + P+++
Sbjct: 343 QGGREEITF-----LVPASKCGIVIGRGGETIKLINQQSGAHTEMDRNASNPPNEKLFKS 397
Query: 96 SGSPDQVQEARARIEELID 114
G+ DQV+ AR I E I+
Sbjct: 398 KGTTDQVEAARQMISEKIN 416
>gi|195335055|ref|XP_002034191.1| GM20025 [Drosophila sechellia]
gi|194126161|gb|EDW48204.1| GM20025 [Drosophila sechellia]
Length = 802
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 55/73 (75%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E +V VPK AVGVVIGKGGDMI+K+Q E G ++QF+Q + D+ DRRC++ G+ QV +
Sbjct: 317 ESTEVFVPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQGKNDEMGDRRCVIQGTRQQVDD 376
Query: 105 ARARIEELIDSVM 117
A+ I+ LI++VM
Sbjct: 377 AKRTIDGLIENVM 389
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 42/66 (63%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
++ +P A VG+VIGKGGD IK+LQ +TGA++ +Q + + +SG +++ A+
Sbjct: 216 EIMIPGAKVGLVIGKGGDTIKQLQEKTGAKMIIIQDGPNQELIKPLRISGEAQKIEHAKQ 275
Query: 108 RIEELI 113
+ +LI
Sbjct: 276 MVLDLI 281
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 36 RGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCML 95
+GG E+T+ VP + G+VIG+GG+ IK + ++GA + + + P+++
Sbjct: 424 QGGREEITF-----LVPASKCGIVIGRGGETIKLINQQSGAHTEMDRNASNPPNEKLFKS 478
Query: 96 SGSPDQVQEARARIEELID 114
G+ DQV+ AR I E I+
Sbjct: 479 KGTTDQVEAARQMISEKIN 497
>gi|195584054|ref|XP_002081830.1| GD25511 [Drosophila simulans]
gi|194193839|gb|EDX07415.1| GD25511 [Drosophila simulans]
Length = 803
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 55/73 (75%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E +V VPK AVGVVIGKGGDMI+K+Q E G ++QF+Q + D+ DRRC++ G+ QV +
Sbjct: 317 ESTEVFVPKIAVGVVIGKGGDMIRKIQTECGCKLQFIQGKNDEMGDRRCVIQGTRQQVDD 376
Query: 105 ARARIEELIDSVM 117
A+ I+ LI++VM
Sbjct: 377 AKRTIDGLIENVM 389
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 42/66 (63%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
++ +P A VG+VIGKGGD IK+LQ +TGA++ +Q + + +SG +++ A+
Sbjct: 216 EIMIPGAKVGLVIGKGGDTIKQLQEKTGAKMIIIQDGPNQELIKPLRISGEAQKIEHAKQ 275
Query: 108 RIEELI 113
+ +LI
Sbjct: 276 MVLDLI 281
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 36 RGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCML 95
+GG E+T+ VP + G+VIG+GG+ IK + ++GA + + + P+++
Sbjct: 424 QGGREEITF-----LVPASKCGIVIGRGGETIKLINQQSGAHTEMDRNASNPPNEKLFKS 478
Query: 96 SGSPDQVQEARARIEELID 114
G+ DQV+ AR I E I+
Sbjct: 479 KGTTDQVEAARQMISEKIN 497
>gi|160333253|ref|NP_001103813.1| P-element somatic inhibitor [Bombyx mori]
gi|159031799|dbj|BAF91871.1| Bombyx homolog of P-element somatic inhibitor [Bombyx mori]
Length = 703
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 49/69 (71%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
+V VPK A+GVVIG G MIKK+Q +TG RVQF Q +++P D+ C L G P Q+ +AR
Sbjct: 300 EVLVPKVAIGVVIGHKGKMIKKIQADTGCRVQFNQEHDEEPGDKLCYLQGKPHQLDQARQ 359
Query: 108 RIEELIDSV 116
IE+LI SV
Sbjct: 360 MIEDLISSV 368
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I +LQ E+G ++Q + +P DR C L+GS D +Q A+ +
Sbjct: 108 VPDRMVGLIIGRGGEQITRLQAESGCKIQMAPPTDGNP-DRLCTLTGSRDAIQRAKELVN 166
Query: 111 ELID 114
++++
Sbjct: 167 QIVN 170
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD----PSDRRCMLSGSPDQVQ 103
++ +P A VG++IGK G IK+LQ +TGA++ +Q ++ P ++ +SG P +V+
Sbjct: 200 EIMIPGAKVGLIIGKNGKTIKQLQEQTGAKMVVIQDGPNENSFKPQEKPLRISGDPAKVE 259
Query: 104 EARARIEELI 113
A+ + EL+
Sbjct: 260 HAKQLVFELL 269
>gi|291240053|ref|XP_002739934.1| PREDICTED: far upstream element-binding protein-like [Saccoglossus
kowalevskii]
Length = 767
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 54/72 (75%), Gaps = 5/72 (6%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
++ VP+ AVG+VIG+GGDMIKK+QNETGAR+QF R DD +R ++SGS D++
Sbjct: 332 FEMLVPRFAVGIVIGRGGDMIKKIQNETGARIQF---RPDDGHSPERLAVISGSDDKIDH 388
Query: 105 ARARIEELIDSV 116
AR +I+ELIDS
Sbjct: 389 AREKIDELIDSA 400
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 9/91 (9%)
Query: 24 GNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM 83
GN EF R G ++ E VP VG+VIG+GG+ I +LQ E+G ++Q Q
Sbjct: 112 GNQDEFE-----RPGQSSLSEEY---AVPDKLVGLVIGRGGEQITRLQAESGCKIQIAQD 163
Query: 84 REDDPSDRRCMLSGSPDQVQEARARIEELID 114
P DR C L+G+P ++ A+A I+ +I+
Sbjct: 164 SGGLP-DRMCTLTGNPQAIERAKALIDRIIE 193
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSDRRCMLSGSPDQVQE 104
I++ +P VG+VIGKGG+MIKKLQ G ++ +Q SD+ +SG P + +
Sbjct: 212 TIELMIPSNKVGLVIGKGGEMIKKLQERAGVKMVMIQDATTSGTSDKPLRVSGDPQKCKH 271
Query: 105 ARARIEELI---DSVMVEQF 121
AR + ELI D+ +E F
Sbjct: 272 ARELVNELIGDKDNPGMEMF 291
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 50 CVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARI 109
VP + G+VIGKGG+ I+ + ++GA V+ + P ++ + GSP Q+ A+ I
Sbjct: 448 TVPSSKCGLVIGKGGETIRNINMQSGAHVELSR-NLGPPGEKVFTIRGSPQQISCAQQLI 506
Query: 110 EELI 113
E +
Sbjct: 507 HEKV 510
>gi|313233410|emb|CBY24525.1| unnamed protein product [Oikopleura dioica]
Length = 639
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/76 (51%), Positives = 51/76 (67%), Gaps = 5/76 (6%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSD--RRCMLSGSPDQVQE 104
I+V VPKAAVGVVIG+GG+ I K+QNET R+QF + DDP+ R C +SG+P+ Q
Sbjct: 217 IEVSVPKAAVGVVIGRGGENISKIQNETNTRIQF---KTDDPTQDVRSCSISGTPEACQV 273
Query: 105 ARARIEELIDSVMVEQ 120
A RI E+ + EQ
Sbjct: 274 ANDRISEIARQKLQEQ 289
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ VP VG++IGK G+ I ++Q ETG RVQ V S+R C L+G+ QV A+ +
Sbjct: 49 ISVPDQLVGLIIGKNGEQINRIQQETGCRVQIVP-NSTGGSERPCTLTGTFHQVHHAKQK 107
Query: 109 IEELI 113
+ E+I
Sbjct: 108 LNEII 112
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSD--RRCMLSGSPDQVQE 104
++ VP + GVVIGKGG+ I+ ++ +GA VQ ++ D D + ++ G+ Q+QE
Sbjct: 321 VEYPVPASRAGVVIGKGGENIRLIKENSGAFVQ-IEKNASDKGDNWKTFIIRGTEQQIQE 379
Query: 105 ARARIEE 111
A+ I++
Sbjct: 380 AQKLIQD 386
>gi|313246366|emb|CBY35281.1| unnamed protein product [Oikopleura dioica]
Length = 641
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 39/76 (51%), Positives = 51/76 (67%), Gaps = 5/76 (6%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSD--RRCMLSGSPDQVQE 104
I+V VPKAAVGVVIG+GG+ I K+QNET R+QF + DDP+ R C +SG+P+ Q
Sbjct: 232 IEVSVPKAAVGVVIGRGGENISKIQNETNTRIQF---KTDDPTQDVRSCSISGTPEACQV 288
Query: 105 ARARIEELIDSVMVEQ 120
A RI E+ + EQ
Sbjct: 289 ANDRISEIARQKLQEQ 304
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ VP VG++IGK G+ I ++Q ETG RVQ V S+R C L+G+ QV A+ +
Sbjct: 49 ISVPDQLVGLIIGKNGEQINRIQQETGCRVQIVP-NSTGGSERPCTLTGTFHQVHHAKQK 107
Query: 109 IEELI 113
+ E+I
Sbjct: 108 LNEII 112
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSD--RRCMLSGSPDQVQE 104
++ VP + GVVIGKGG+ I+ ++ +GA VQ ++ D D + ++ G+ Q+QE
Sbjct: 323 VEYPVPASRAGVVIGKGGENIRLIKENSGAFVQ-IEKNASDKGDNWKTFIIRGTEQQIQE 381
Query: 105 ARARIEE 111
A+ I++
Sbjct: 382 AQKLIQD 388
Score = 36.2 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM-LSGSPDQVQEARARI 109
+P G++IGKGG+ +K+L E ++ VQ + D + + + G+P V+ A+ I
Sbjct: 147 IPPDKCGLIIGKGGNTLKQLMQEFNVKLHLVQESAEITRDEKPLKIIGTPQAVESAKNAI 206
Query: 110 EELI 113
L+
Sbjct: 207 VGLM 210
>gi|391338140|ref|XP_003743419.1| PREDICTED: far upstream element-binding protein 3-like, partial
[Metaseiulus occidentalis]
Length = 502
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 52/70 (74%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
Q+ VP+ AVGVVIGK G+MIK++Q+ETGARVQF ++ DR C+++G +QV A +
Sbjct: 296 QLLVPQQAVGVVIGKHGEMIKRIQHETGARVQFQGTPDETHPDRICVITGQSNQVLGACS 355
Query: 108 RIEELIDSVM 117
+I +LI SV+
Sbjct: 356 KISDLITSVL 365
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
IQ VP + G+VIGKGG+ I+ + N + A V+ ++ + + +DR ++ GSP ++ AR
Sbjct: 430 IQYPVPASKCGLVIGKGGETIRSIMNASRAYVELCRVADPNAADRFFIIRGSPQSIESAR 489
Query: 107 ARIEELIDSV 116
I E I S
Sbjct: 490 QLISEKIGSA 499
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+ G I +LQ+ET +VQ P +R C+L G+ V++A+ I
Sbjct: 99 VPDKMVGLIIGRDGKQISRLQHETSCKVQLSSESNGTP-ERPCVLIGTKQAVEKAKEMIS 157
Query: 111 ELID 114
LI
Sbjct: 158 ALIS 161
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 39/68 (57%), Gaps = 8/68 (11%)
Query: 52 PKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP-----SDRRCMLSGSPDQVQEAR 106
P + G+VIG+ G+ I+ LQ+ G ++ +Q D+P +++ ++G P +V+ A+
Sbjct: 189 PASKAGLVIGRNGETIRNLQSRAGVKMVLLQ---DNPGNSPNAEKPIRITGEPHKVELAK 245
Query: 107 ARIEELID 114
I +LI
Sbjct: 246 KMIRDLIS 253
>gi|405969780|gb|EKC34731.1| Far upstream element-binding protein 3 [Crassostrea gigas]
Length = 772
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 51/68 (75%), Gaps = 1/68 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+++ VP+ AVG+VIGK GDMIKK+Q E+GA+VQF + P +R C ++GSPD+VQ A
Sbjct: 397 MEIPVPRTAVGIVIGKNGDMIKKIQQESGAKVQFKADDGNSP-ERVCAIAGSPDKVQIAA 455
Query: 107 ARIEELID 114
I+EL++
Sbjct: 456 QMIQELLN 463
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLS 96
GG VT E +P VG++IGKGG+ I +LQ ETG ++Q P DR+C L+
Sbjct: 188 GGGMVVTEEY---AIPDKMVGLIIGKGGEQITRLQAETGCKIQIAPDGSGMP-DRQCTLT 243
Query: 97 GSPDQVQEARARIEELI 113
GS + + +I+++I
Sbjct: 244 GSSGAIAACKQQIQDII 260
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
Q VP G+VIGKGG+ I+++ ++GA V+ + +P+++ + G PDQ+Q A
Sbjct: 514 QFAVPADKCGLVIGKGGETIRQINQQSGAHVELQKHPGPNPNEKLFNIKGGPDQIQHAIQ 573
Query: 108 RIEE 111
I E
Sbjct: 574 MISE 577
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQ 103
V+++ VP VG+VIGKGG+ IK+LQ G ++ +Q + PS ++ +SG P + Q
Sbjct: 301 VVEMMVPGNKVGLVIGKGGETIKQLQERAGVKMVMIQ-DSNIPSAAEKPLRISGDPQKCQ 359
Query: 104 EARARIEELI 113
A+ + +L+
Sbjct: 360 RAKEMVLDLL 369
>gi|443720285|gb|ELU10083.1| hypothetical protein CAPTEDRAFT_219465 [Capitella teleta]
Length = 708
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 52/74 (70%), Gaps = 5/74 (6%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQ 103
+++ VP++ VGVVIG+GG+MIKK+Q ETGA+VQF + DD +R C ++G D+VQ
Sbjct: 321 AMEIPVPRSMVGVVIGRGGEMIKKIQAETGAKVQF---KTDDGQGPNRMCTINGPQDKVQ 377
Query: 104 EARARIEELIDSVM 117
A I ELID+ M
Sbjct: 378 NASCMIRELIDTAM 391
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 50 CVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARI 109
VP VG++IGKGG+ I +Q+ETG +VQF P DR C L G+P + EA+ I
Sbjct: 149 SVPDRMVGLIIGKGGEQIANIQSETGCKVQFAPDSAGMP-DRPCQLMGTPQAIAEAKKTI 207
Query: 110 EELI 113
E +I
Sbjct: 208 ERII 211
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQ 103
+++V +P VG+VIGKGG+ IK LQ + G ++ +Q + PS D+ ++GS Q
Sbjct: 227 MLEVFIPGNKVGLVIGKGGETIKHLQEQAGVKMVMIQ-DSNLPSNQDKPLRITGSIQACQ 285
Query: 104 EARARIEELI 113
+A+ + +LI
Sbjct: 286 KAKELVMDLI 295
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 50 CVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS-DRRCMLSGSPDQVQEA 105
VP G+VIGKGG+ I+++ ++GA V+ + + S DR + G+ DQ+Q A
Sbjct: 443 AVPAEKCGLVIGKGGETIREINRQSGAHVELDRHQSQSNSRDRVFKIQGNADQIQSA 499
>gi|193083019|ref|NP_001122343.1| far upstream element-binding protein [Ciona intestinalis]
gi|70569713|dbj|BAE06462.1| Ci-FUSE [Ciona intestinalis]
Length = 325
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 50/72 (69%), Gaps = 5/72 (6%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEAR 106
+ VPKAAVGVVIGKGGDMI ++QN TG RVQF + +DP+ +R C + G + V A
Sbjct: 252 IPVPKAAVGVVIGKGGDMINQIQNVTGTRVQF---KPEDPTLPERMCSVMGPKEGVDAAI 308
Query: 107 ARIEELIDSVMV 118
RI E+I +V++
Sbjct: 309 RRIHEIIQNVLI 320
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
+P VG++IG+GG+ I ++Q ETG R+Q Q +R C LSG+ +Q++ R +
Sbjct: 54 LPDDLVGLIIGRGGENIMRMQRETGCRIQITQSIPGT-KERPCTLSGTQEQIEVCRNMLN 112
Query: 111 ELIDSVMVEQFSGANFD 127
E+I G+NF+
Sbjct: 113 EIISRSQAGTL-GSNFN 128
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD 87
I++ VP G++IGKGG+ IK LQ G ++ +Q D+
Sbjct: 146 IEIAVPPDKCGLIIGKGGETIKMLQQSLGVKMLLIQDSTDN 186
>gi|260797497|ref|XP_002593739.1| hypothetical protein BRAFLDRAFT_124476 [Branchiostoma floridae]
gi|229278967|gb|EEN49750.1| hypothetical protein BRAFLDRAFT_124476 [Branchiostoma floridae]
Length = 730
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+ + VP+ AVG+VIGKGG+MIKK+QNE+G RVQF +P +R C L G+PD+ Q A
Sbjct: 311 MDIPVPRFAVGIVIGKGGEMIKKIQNESGVRVQFKPDDGQNP-NRVCQLIGAPDRCQAAA 369
Query: 107 ARIEELID 114
I+ L++
Sbjct: 370 HTIQNLVE 377
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I +LQ E+G +VQ Q P +R C L+G+P ++ A+ I+
Sbjct: 117 VPDKMVGLIIGRGGEQITRLQAESGCKVQMAQDSGGLP-ERVCTLTGTPPSIEHAKRLID 175
Query: 111 ELID 114
++I+
Sbjct: 176 QIIE 179
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 6/75 (8%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM----LSGSPDQVQEAR 106
VP G+VIGKGG+ I+ + ++GA V+ MR P M + GSP Q+ A+
Sbjct: 417 VPNNKCGLVIGKGGESIRTINQQSGAHVEL--MRNPPPHCEPGMKMFSIRGSPQQIDHAK 474
Query: 107 ARIEELIDSVMVEQF 121
I E I M E F
Sbjct: 475 QLIHEKISDDMHEPF 489
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP----SDRRCMLSGSPDQ 101
V ++ +P VG+VIGKGG+ I+ LQ G ++ +Q D P ++ ++G P +
Sbjct: 200 VTEMMIPGNKVGLVIGKGGETIRSLQERAGVKMVMIQ---DGPYMNAPEKPLRITGDPQK 256
Query: 102 VQEARARIEELIDSVMVE 119
Q A+ + +LI +E
Sbjct: 257 TQRAKDLVMDLITDKELE 274
>gi|351698848|gb|EHB01767.1| Far upstream element-binding protein 1 [Heterocephalus glaber]
Length = 637
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 12/114 (10%)
Query: 5 EFQQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGG 64
+ QQ++ + R+ F +R NE G GG E I V +P+ AVG+VIG+ G
Sbjct: 186 QLQQAKEMVLELIRDQGGFREVR--NEYGSRIGGN-----EGIDVPIPRFAVGIVIGRNG 238
Query: 65 DMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEARARIEELIDSV 116
+MIKK+QN+ G R+QF + DD + DR ++G PD+ Q A I +L+ SV
Sbjct: 239 EMIKKIQNDAGVRIQF---KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSV 289
Score = 39.3 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 13/76 (17%)
Query: 51 VPKAAVGVVIGKG-----------GDMIKKLQNETGARVQFVQMR--EDDPSDRRCMLSG 97
VP G++IGKG G+ IK + ++GAR++ + DP+ + + G
Sbjct: 326 VPTGKTGLIIGKGNGNNSLLNFLGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRG 385
Query: 98 SPDQVQEARARIEELI 113
+P Q+ AR IEE I
Sbjct: 386 TPQQIDYARQLIEEKI 401
>gi|432911382|ref|XP_004078652.1| PREDICTED: uncharacterized protein LOC101169884 [Oryzias latipes]
Length = 666
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 49/74 (66%), Gaps = 5/74 (6%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
E + V VP+ AVG+VIG+ G+MIKK+QN+TG R+QF + DD S DR + G PDQ
Sbjct: 272 ESLDVPVPRFAVGIVIGRNGEMIKKIQNDTGVRIQF---KPDDGSAPDRIAQIMGPPDQA 328
Query: 103 QEARARIEELIDSV 116
Q A I +L+ SV
Sbjct: 329 QHAADIIADLLRSV 342
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 14/89 (15%)
Query: 29 FNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP 88
F+ N DG G V ++ VP + G+VIGKGG+ IK LQ G ++ +Q D P
Sbjct: 175 FHHN-DGPG------MTVQEIMVPASKAGLVIGKGGETIKSLQERAGVKMVMIQ---DGP 224
Query: 89 ----SDRRCMLSGSPDQVQEARARIEELI 113
+D+ +SG P +VQ+A+ + ELI
Sbjct: 225 QNTGADKPLRISGEPFKVQQAKEMVMELI 253
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ--MREDDPSDRRCM 94
GG+ E T+ VP G++IGKGG+ IK + ++GAR++ + DP+ +
Sbjct: 369 GGLQEFTF-----TVPTMKTGLIIGKGGETIKGISQQSGARIELQRNPPPNSDPNIKMFT 423
Query: 95 LSGSPDQVQEARARIEELI 113
+ GSP Q+ AR +EE I
Sbjct: 424 VRGSPQQIDYARQLVEEKI 442
Score = 43.5 bits (101), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 10/96 (10%)
Query: 19 NNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARV 78
ND F M G GG + E + VP VG +IG+GG+ I ++Q E+G ++
Sbjct: 82 TNDAFSAMA-------GMGGPSRSSSE--EFKVPDGMVGFIIGRGGEQISRIQQESGCKI 132
Query: 79 QFVQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
Q P +R L+G D +Q A+ + E+++
Sbjct: 133 QIAPDSGGMP-ERSVTLTGPQDSIQAAKRLLSEIVE 167
>gi|70569708|dbj|BAE06461.1| Ci-FUSE [Ciona intestinalis]
Length = 426
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/68 (54%), Positives = 47/68 (69%), Gaps = 5/68 (7%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEARAR 108
VPKAAVGVVIGKGGDMI ++QN TG RVQF + +DP+ +R C + G + V A R
Sbjct: 11 VPKAAVGVVIGKGGDMINQIQNVTGTRVQF---KPEDPTLPERMCSVMGPKEGVDAAIRR 67
Query: 109 IEELIDSV 116
I E+I +V
Sbjct: 68 IHEIIQNV 75
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSD---RRCMLSGSPDQVQEARA 107
VP G+VIGKGGD IK++ ++GA + +Q SD + ++ G+P+Q++ AR
Sbjct: 128 VPANKTGLVIGKGGDTIKQINMQSGAHAE-IQRNPPPGSDLNYKTFIIKGTPEQIKMARQ 186
Query: 108 RIEELIDS 115
I+E +D+
Sbjct: 187 LIQEKVDA 194
>gi|345327623|ref|XP_001506617.2| PREDICTED: far upstream element-binding protein 1-like
[Ornithorhynchus anatinus]
Length = 827
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 44/112 (39%), Positives = 64/112 (57%), Gaps = 12/112 (10%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ++ + R+ F +R NE G GG E I V +P+ AVG+VIG+ G+M
Sbjct: 385 QQAKEMVLELIRDQGGFREVR--NEYGSRIGGN-----EGIDVPIPRFAVGIVIGRNGEM 437
Query: 67 IKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+QN+ G R+QF + DD + DR ++G PD+ Q A I +L+ SV
Sbjct: 438 IKKIQNDAGVRIQF---KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSV 486
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 7/99 (7%)
Query: 16 IGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETG 75
+ ND+FG + R M E + VP VG +IG+GG+ I ++Q E+G
Sbjct: 218 VAPQNDSFGTQLPPPMHQQQRSVMTE------EYKVPDGMVGFIIGRGGEQISRIQQESG 271
Query: 76 ARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
++Q P +R CML+G+P+ VQ A+ ++++++
Sbjct: 272 CKIQIAPDSGGLP-ERSCMLTGTPESVQSAKRLLDQIVE 309
Score = 50.4 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 13/86 (15%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--- 88
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q D P
Sbjct: 319 HGDGPGN------SVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQ---DGPQNT 369
Query: 89 -SDRRCMLSGSPDQVQEARARIEELI 113
+D+ ++G P +VQ+A+ + ELI
Sbjct: 370 GADKPLRITGDPYKVQQAKEMVLELI 395
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
VP G++IGKGG+ IK + ++GAR++ + DP+ + + G+P Q+ AR
Sbjct: 523 VPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQL 582
Query: 109 IEELI 113
IEE I
Sbjct: 583 IEEKI 587
>gi|444727564|gb|ELW68050.1| Far upstream element-binding protein 1 [Tupaia chinensis]
Length = 587
Score = 65.5 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 44/112 (39%), Positives = 64/112 (57%), Gaps = 12/112 (10%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ++ + R+ F +R NE G GG E I V +P+ AVG+VIG+ G+M
Sbjct: 188 QQAKEMVLELIRDQGGFREVR--NEYGSRIGGN-----EGIDVPIPRFAVGIVIGRNGEM 240
Query: 67 IKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+QN+ G R+QF + DD + DR ++G PD+ Q A I +L+ SV
Sbjct: 241 IKKIQNDAGVRIQF---KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSV 289
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 13/86 (15%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--- 88
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q D P
Sbjct: 122 HGDGPGN------AVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQ---DGPQNT 172
Query: 89 -SDRRCMLSGSPDQVQEARARIEELI 113
+D+ ++G P +VQ+A+ + ELI
Sbjct: 173 GADKPLRITGDPYKVQQAKEMVLELI 198
Score = 42.7 bits (99), Expect = 0.054, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 51 VPKAAVGVVIGKG-GDMIKKLQNETGARVQFVQMR--EDDPSDRRCMLSGSPDQVQEARA 107
VP G++IGKG G+ IK + ++GAR++ + DP+ + + G+P Q+ AR
Sbjct: 326 VPTGKTGLIIGKGRGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQ 385
Query: 108 RIEELI 113
IEE I
Sbjct: 386 LIEEKI 391
>gi|348521966|ref|XP_003448497.1| PREDICTED: far upstream element-binding protein 1 [Oreochromis
niloticus]
Length = 631
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 47/72 (65%), Gaps = 5/72 (6%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
+ V VP+ AVG+VIG+ G+MIKK+QN+TG R+QF + DD DR + G PDQ Q
Sbjct: 263 LDVPVPRFAVGIVIGRNGEMIKKIQNDTGVRIQF---KPDDGTTPDRIAQIMGPPDQAQH 319
Query: 105 ARARIEELIDSV 116
A I +L+ SV
Sbjct: 320 AAEIISDLLRSV 331
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 14/89 (15%)
Query: 29 FNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP 88
F+ N DG G V ++ VP + G+VIGKGG+ IK LQ G ++ +Q D P
Sbjct: 164 FHHN-DGPG------MTVQEIMVPASKAGLVIGKGGETIKSLQERAGVKMVMIQ---DGP 213
Query: 89 ----SDRRCMLSGSPDQVQEARARIEELI 113
+D+ +SG P +VQ+A+ + ELI
Sbjct: 214 QNTGADKPLRISGEPFKVQQAKEMVMELI 242
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCM 94
GG+ E T+ VP G++IGKGG+ IK + ++GAR++ + DP+ +
Sbjct: 358 GGLQEFTF-----TVPTMKTGLIIGKGGETIKGISQQSGARIELQRNPPPNADPNIKMFT 412
Query: 95 LSGSPDQVQEARARIEELI 113
+ GSP Q+ AR +EE I
Sbjct: 413 VRGSPQQIDYARQLVEEKI 431
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I +LQ E+G ++Q P DR L+G P+ +Q A+ +
Sbjct: 94 VPDGMVGFIIGRGGEQISRLQQESGCKIQIAPDSGGMP-DRSVTLTGLPESIQTAKRLLT 152
Query: 111 ELID 114
E+++
Sbjct: 153 EIVE 156
>gi|348530804|ref|XP_003452900.1| PREDICTED: far upstream element-binding protein 2-like [Oreochromis
niloticus]
Length = 685
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 68/117 (58%), Gaps = 5/117 (4%)
Query: 5 EFQQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEV---IQVCVPKAAVGVVIG 61
+ QQ++ Q I R+ D G E +E GG +V+ V +++ VP+ +VGVVIG
Sbjct: 264 KVQQAQEMVQEILRDRDQ-GGYSERSEFSSRMGGGMDVSLCVGARLEIPVPRHSVGVVIG 322
Query: 62 KGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELIDSVMV 118
+ G+MIKK+QN+ G R+QF Q P D+ +SG P++ + A I +L+ S+ V
Sbjct: 323 RNGEMIKKIQNDAGVRIQFKQDDGTGP-DKIAHISGPPERCEHAAQIINDLLQSIRV 378
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 51/89 (57%), Gaps = 7/89 (7%)
Query: 26 MREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRE 85
+ ++++ +G+ G V ++ +P G+VIGKGG+ IK+LQ G ++ +Q
Sbjct: 194 LSSYHDSSNGQNGA------VHEMMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDAS 247
Query: 86 DDPS-DRRCMLSGSPDQVQEARARIEELI 113
P+ D+ + G P +VQ+A+ ++E++
Sbjct: 248 QGPNVDKPLRIIGDPYKVQQAQEMVQEIL 276
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 50 CVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARI 109
VP + VG++IG+GG+ I K+Q E+G +VQ P +R L+G+ D +Q+A+ +
Sbjct: 123 SVPDSMVGLIIGRGGEQINKIQQESGCKVQIAPDSGGLP-ERNVSLTGTQDSIQKAKRLL 181
Query: 110 EELI 113
E++
Sbjct: 182 NEIV 185
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 50 CVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCMLSGSPDQVQEARA 107
+P G+VIG+GG+ +K + +TGA V+ + DP+ + ++ GSP Q+ A+
Sbjct: 416 SIPAQKCGLVIGRGGENVKSINQQTGAFVEISRQPPPNGDPNFKLFIIRGSPQQIDHAKQ 475
Query: 108 RIEELIDSVM 117
IEE I+ +
Sbjct: 476 LIEEKIEGPL 485
>gi|426215780|ref|XP_004002147.1| PREDICTED: far upstream element-binding protein 1 isoform 2 [Ovis
aries]
Length = 655
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 44/112 (39%), Positives = 64/112 (57%), Gaps = 12/112 (10%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ++ + R+ F +R NE G GG E I V +P+ AVG+VIG+ G+M
Sbjct: 245 QQAKEMVLELIRDQGGFREVR--NEYGSRIGGN-----EGIDVPIPRFAVGIVIGRNGEM 297
Query: 67 IKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+QN+ G R+QF + DD + DR ++G PD+ Q A I +L+ SV
Sbjct: 298 IKKIQNDAGVRIQF---KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSV 346
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 16 IGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETG 75
+ ND+FG R M E + VP VG +IG+GG+ I ++Q E+G
Sbjct: 78 VAPQNDSFGTQLPPMHQQQSRSVMTE------EYKVPDGMVGFIIGRGGEQISRIQQESG 131
Query: 76 ARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
++Q P +R CML+G+P+ VQ A+ ++++++
Sbjct: 132 CKIQIAPDSGGLP-ERSCMLTGTPESVQSAKRLLDQIVE 169
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 7/83 (8%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSD 90
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q ++ +D
Sbjct: 179 HGDGPGN------AVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 232
Query: 91 RRCMLSGSPDQVQEARARIEELI 113
+ ++G P +VQ+A+ + ELI
Sbjct: 233 KPLRITGDPYKVQQAKEMVLELI 255
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
VP G++IGKGG+ IK + ++GAR++ + DP+ + + G+P Q+ AR
Sbjct: 383 VPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQL 442
Query: 109 IEELI 113
IEE I
Sbjct: 443 IEEKI 447
>gi|410967578|ref|XP_003990295.1| PREDICTED: far upstream element-binding protein 1 isoform 2 [Felis
catus]
Length = 655
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 44/112 (39%), Positives = 64/112 (57%), Gaps = 12/112 (10%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ++ + R+ F +R NE G GG E I V +P+ AVG+VIG+ G+M
Sbjct: 245 QQAKEMVLELIRDQGGFREVR--NEYGSRIGGN-----EGIDVPIPRFAVGIVIGRNGEM 297
Query: 67 IKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+QN+ G R+QF + DD + DR ++G PD+ Q A I +L+ SV
Sbjct: 298 IKKIQNDAGVRIQF---KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSV 346
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 16 IGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETG 75
+ ND+FG R M E + VP VG +IG+GG+ I ++Q E+G
Sbjct: 78 VAPQNDSFGTQLPPMHQQQSRSVMTE------EYKVPDGMVGFIIGRGGEQISRIQQESG 131
Query: 76 ARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
++Q P +R CML+G+P+ VQ A+ ++++++
Sbjct: 132 CKIQIAPDSGGLP-ERSCMLTGTPESVQSAKRLLDQIVE 169
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 7/83 (8%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSD 90
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q ++ +D
Sbjct: 179 HGDGPGN------AVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 232
Query: 91 RRCMLSGSPDQVQEARARIEELI 113
+ ++G P +VQ+A+ + ELI
Sbjct: 233 KPLRITGDPYKVQQAKEMVLELI 255
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
VP G++IGKGG+ IK + ++GAR++ + DP+ + + G+P Q+ AR
Sbjct: 383 VPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQL 442
Query: 109 IEELI 113
IEE I
Sbjct: 443 IEEKI 447
>gi|281349073|gb|EFB24657.1| hypothetical protein PANDA_011323 [Ailuropoda melanoleuca]
Length = 568
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 44/112 (39%), Positives = 64/112 (57%), Gaps = 12/112 (10%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ++ + R+ F +R NE G GG E I V +P+ AVG+VIG+ G+M
Sbjct: 157 QQAKEMVLELIRDQGGFREVR--NEYGSRIGGN-----EGIDVPIPRFAVGIVIGRNGEM 209
Query: 67 IKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+QN+ G R+QF + DD + DR ++G PD+ Q A I +L+ SV
Sbjct: 210 IKKIQNDAGVRIQF---KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSV 258
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R CML+G+P+ VQ A+ ++
Sbjct: 19 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP-ERSCMLTGTPESVQSAKRLLD 77
Query: 111 ELID 114
++++
Sbjct: 78 QIVE 81
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 13/86 (15%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--- 88
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q D P
Sbjct: 91 HGDGPGN------AVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQ---DGPQNT 141
Query: 89 -SDRRCMLSGSPDQVQEARARIEELI 113
+D+ ++G P +VQ+A+ + ELI
Sbjct: 142 GADKPLRITGDPYKVQQAKEMVLELI 167
Score = 42.0 bits (97), Expect = 0.074, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 51 VPKAAVGVVIGKG-GDMIKKLQNETGARVQFVQMR--EDDPSDRRCMLSGSPDQVQEARA 107
VP G++IGKG G+ IK + ++GAR++ + DP+ + + G+P Q+ AR
Sbjct: 295 VPTGKTGLIIGKGRGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQ 354
Query: 108 RIEELI 113
IEE I
Sbjct: 355 LIEEKI 360
>gi|417403740|gb|JAA48667.1| Putative k-logy type rna binding protein [Desmodus rotundus]
Length = 667
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 44/112 (39%), Positives = 64/112 (57%), Gaps = 12/112 (10%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ++ + R+ F +R NE G GG E I V +P+ AVG+VIG+ G+M
Sbjct: 266 QQAKEMVLELIRDQGGFREVR--NEYGSRIGGN-----EGIDVPIPRFAVGIVIGRNGEM 318
Query: 67 IKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+QN+ G R+QF + DD + DR ++G PD+ Q A I +L+ SV
Sbjct: 319 IKKIQNDAGVRIQF---KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSV 367
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 16 IGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETG 75
+ ND+FG R M E + VP VG +IG+GG+ I ++Q E+G
Sbjct: 99 VAPQNDSFGTQLPPMHQQQSRSVMTE------EYKVPDGMVGFIIGRGGEQISRIQQESG 152
Query: 76 ARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
++Q P +R CML+G+P+ VQ A+ ++++++
Sbjct: 153 CKIQIAPDSGGLP-ERSCMLTGTPESVQSAKRLLDQIVE 190
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 7/83 (8%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSD 90
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q ++ +D
Sbjct: 200 HGDGPGN------AVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 253
Query: 91 RRCMLSGSPDQVQEARARIEELI 113
+ ++G P +VQ+A+ + ELI
Sbjct: 254 KPLRITGDPYKVQQAKEMVLELI 276
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
VP G++IGKGG+ IK + ++GAR++ + DP+ + + G+P Q+ AR
Sbjct: 404 VPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQL 463
Query: 109 IEELI 113
IEE I
Sbjct: 464 IEEKI 468
>gi|440898065|gb|ELR49638.1| Far upstream element-binding protein 1 [Bos grunniens mutus]
Length = 675
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 44/112 (39%), Positives = 64/112 (57%), Gaps = 12/112 (10%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ++ + R+ F +R NE G GG E I V +P+ AVG+VIG+ G+M
Sbjct: 276 QQAKEMVLELIRDQGGFREVR--NEYGSRIGGN-----EGIDVPIPRFAVGIVIGRNGEM 328
Query: 67 IKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+QN+ G R+QF + DD + DR ++G PD+ Q A I +L+ SV
Sbjct: 329 IKKIQNDAGVRIQF---KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSV 377
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 16 IGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETG 75
+ ND+FG R M E + VP VG +IG+GG+ I ++Q E+G
Sbjct: 109 VAPQNDSFGTQLPPMHQQQSRSVMTE------EYKVPDGMVGFIIGRGGEQISRIQQESG 162
Query: 76 ARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
++Q P +R CML+G+P+ VQ A+ ++++++
Sbjct: 163 CKIQIAPDSGGLP-ERSCMLTGTPESVQSAKRLLDQIVE 200
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 7/83 (8%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSD 90
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q ++ +D
Sbjct: 210 HGDGPGN------AVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 263
Query: 91 RRCMLSGSPDQVQEARARIEELI 113
+ ++G P +VQ+A+ + ELI
Sbjct: 264 KPLRITGDPYKVQQAKEMVLELI 286
Score = 42.0 bits (97), Expect = 0.077, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 51 VPKAAVGVVIGKG-GDMIKKLQNETGARVQFVQMR--EDDPSDRRCMLSGSPDQVQEARA 107
VP G++IGKG G+ IK + ++GAR++ + DP+ + + G+P Q+ AR
Sbjct: 414 VPTGKTGLIIGKGRGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQ 473
Query: 108 RIEELI 113
IEE I
Sbjct: 474 LIEEKI 479
>gi|74206095|dbj|BAE23532.1| unnamed protein product [Mus musculus]
Length = 700
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 56/96 (58%), Gaps = 11/96 (11%)
Query: 24 GNMREF-NENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ 82
G RE NE G GG E I V +P+ AVG+VIG+ G+MIKK+QN+ G R+QF
Sbjct: 255 GGFREVRNEYGSRIGGN-----EGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQF-- 307
Query: 83 MREDD--PSDRRCMLSGSPDQVQEARARIEELIDSV 116
+ DD DR ++G PD+ Q A I +L+ SV
Sbjct: 308 -KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSV 342
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 7/95 (7%)
Query: 20 NDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQ 79
ND+FG R M E + VP VG +IG+GG+ I ++Q E+G ++Q
Sbjct: 78 NDSFGAQLPPMHQQQSRSVMTE------EYKVPDGMVGFIIGRGGEQISRIQQESGCKIQ 131
Query: 80 FVQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
P +R CML+G+P+ VQ A+ ++++++
Sbjct: 132 IAPDSGGLP-ERSCMLTGTPESVQSAKRLLDQIVE 165
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 13/87 (14%)
Query: 31 ENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP-- 88
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q D P
Sbjct: 174 HHGDGPGNA------VQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQ---DGPQN 224
Query: 89 --SDRRCMLSGSPDQVQEARARIEELI 113
+D+ ++G P +VQ+A+ + ELI
Sbjct: 225 TGADKPLRITGDPYKVQQAKEMVLELI 251
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCM 94
GG+ E + VP G++IGKGG+ IK + ++GAR++ + DP+ +
Sbjct: 370 GGLQEFNF-----IVPTGKTGLIIGKGGETIKSISQQSGARIELQRSPPPNADPNMKLFT 424
Query: 95 LSGSPDQVQEARARIEELI 113
+ G+P Q+ AR IEE I
Sbjct: 425 IRGTPQQIDYARQLIEEKI 443
>gi|348536733|ref|XP_003455850.1| PREDICTED: far upstream element-binding protein 2-like [Oreochromis
niloticus]
Length = 678
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 14/101 (13%)
Query: 18 RNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGAR 77
R++ FG E+ G G I+V VP+ +VGVVIG+ G+MIKK+Q++ G +
Sbjct: 253 RDHQGFGERNEYGSRMGGGG---------IEVTVPRHSVGVVIGRSGEMIKKIQSDAGVK 303
Query: 78 VQFVQMREDDPS--DRRCMLSGSPDQVQEARARIEELIDSV 116
+QF + DD + D+ + G PDQ Q A + I +L+ S+
Sbjct: 304 IQF---KPDDGTGPDKIAHIMGPPDQCQHAASIITDLLQSI 341
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP + VG++IG+GG+ I K+Q E+G +VQ P +R L+GSPD +Q ARA ++
Sbjct: 107 VPDSMVGLIIGRGGEQINKIQQESGCKVQIAHDSVGLP-ERSISLTGSPDAIQRARALLD 165
Query: 111 ELI 113
+++
Sbjct: 166 DIV 168
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS-DRRCMLSGSPDQVQEAR 106
++ +P G++IGKGG+ IK+LQ G ++ +Q P+ D+ + G P +VQ+A+
Sbjct: 184 EMIIPAGKAGLIIGKGGETIKQLQERAGVKMILIQDASQPPNIDKPLRIIGDPYKVQQAK 243
Query: 107 ARIEELI 113
+ E++
Sbjct: 244 EMVNEIL 250
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 40 WEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCMLSG 97
W + +P G+VIG+GG+ +K + +TGA V+ + DP+ + + G
Sbjct: 373 WGPPGGEMTFSIPAHKCGLVIGRGGENVKSINQQTGAFVEISRQPPPNGDPNFKLFTIRG 432
Query: 98 SPDQVQEARARIEELIDSVM 117
SP Q+ A+ IEE I++ +
Sbjct: 433 SPQQIDHAKQLIEEKIEAPL 452
>gi|417403606|gb|JAA48602.1| Putative k-logy type rna binding protein [Desmodus rotundus]
Length = 646
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/112 (39%), Positives = 64/112 (57%), Gaps = 12/112 (10%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ++ + R+ F +R NE G GG E I V +P+ AVG+VIG+ G+M
Sbjct: 245 QQAKEMVLELIRDQGGFREVR--NEYGSRIGGN-----EGIDVPIPRFAVGIVIGRNGEM 297
Query: 67 IKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+QN+ G R+QF + DD + DR ++G PD+ Q A I +L+ SV
Sbjct: 298 IKKIQNDAGVRIQF---KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSV 346
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 16 IGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETG 75
+ ND+FG R M E + VP VG +IG+GG+ I ++Q E+G
Sbjct: 78 VAPQNDSFGTQLPPMHQQQSRSVMTE------EYKVPDGMVGFIIGRGGEQISRIQQESG 131
Query: 76 ARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
++Q P +R CML+G+P+ VQ A+ ++++++
Sbjct: 132 CKIQIAPDSGGLP-ERSCMLTGTPESVQSAKRLLDQIVE 169
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 7/83 (8%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSD 90
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q ++ +D
Sbjct: 179 HGDGPGN------AVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 232
Query: 91 RRCMLSGSPDQVQEARARIEELI 113
+ ++G P +VQ+A+ + ELI
Sbjct: 233 KPLRITGDPYKVQQAKEMVLELI 255
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
VP G++IGKGG+ IK + ++GAR++ + DP+ + + G+P Q+ AR
Sbjct: 383 VPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQL 442
Query: 109 IEELI 113
IEE I
Sbjct: 443 IEEKI 447
>gi|17557818|ref|NP_505633.1| Protein C12D8.1, isoform b [Caenorhabditis elegans]
gi|3874255|emb|CAA98233.1| Protein C12D8.1, isoform b [Caenorhabditis elegans]
Length = 611
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 52/80 (65%), Gaps = 4/80 (5%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS-DRRC-MLSGSPDQVQEA 105
+V VP+++VG++IGK GD IK+L ETG ++QF +DDPS RC ++ G+ DQ+ A
Sbjct: 252 EVVVPRSSVGIIIGKQGDTIKRLAMETGTKIQF--KPDDDPSTPERCAVIMGTRDQIYRA 309
Query: 106 RARIEELIDSVMVEQFSGAN 125
RI EL+ ++Q G N
Sbjct: 310 TERITELVKKSTMQQGGGGN 329
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 6/66 (9%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSD--RRCMLSGSPDQVQEARA 107
+P++AVG+VIG+GG I+ +Q + G R VQM D DPS R L GS V+ A+
Sbjct: 76 IPESAVGIVIGRGGSEIQGIQAKAGCR---VQMSPDADPSSGVRMVTLEGSRSNVETAKH 132
Query: 108 RIEELI 113
I E++
Sbjct: 133 LINEVV 138
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM-LSGSPDQVQE 104
I + +P G++IGK GD I++LQ ++G ++ VQ + + + ++G P +++
Sbjct: 156 TIDIAIPPNRCGLIIGKSGDTIRQLQEKSGCKMILVQDNQSVSDQSKPLRITGDPQKIEL 215
Query: 105 ARARIEELI 113
A+ + E++
Sbjct: 216 AKQLVAEIL 224
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 39/77 (50%)
Query: 33 GDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
G+ G M + VP A G+VIGKGG+ IK++ +E+GA + + + ++
Sbjct: 328 GNVAGAMVSNEASTFYMSVPAAKCGLVIGKGGETIKQINSESGAHCELSRDPTGNADEKV 387
Query: 93 CMLSGSPDQVQEARARI 109
++ G ++ A+ I
Sbjct: 388 FVIKGGKRAIEHAKHLI 404
>gi|37078458|sp|Q91WJ8.1|FUBP1_MOUSE RecName: Full=Far upstream element-binding protein 1; Short=FBP;
Short=FUSE-binding protein 1
gi|15928578|gb|AAH14763.1| Fubp1 protein [Mus musculus]
gi|148679986|gb|EDL11933.1| far upstream element (FUSE) binding protein 1, isoform CRA_b [Mus
musculus]
Length = 651
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/112 (39%), Positives = 64/112 (57%), Gaps = 12/112 (10%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ++ + R+ F +R NE G GG E I V +P+ AVG+VIG+ G+M
Sbjct: 241 QQAKEMVLELIRDQGGFREVR--NEYGSRIGGN-----EGIDVPIPRFAVGIVIGRNGEM 293
Query: 67 IKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+QN+ G R+QF + DD + DR ++G PD+ Q A I +L+ SV
Sbjct: 294 IKKIQNDAGVRIQF---KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSV 342
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 7/95 (7%)
Query: 20 NDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQ 79
ND+FG R M E + VP VG +IG+GG+ I ++Q E+G ++Q
Sbjct: 78 NDSFGAQLPPMHQQQSRSVMTE------EYKVPDGMVGFIIGRGGEQISRIQQESGCKIQ 131
Query: 80 FVQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
P +R CML+G+P+ VQ A+ ++++++
Sbjct: 132 IAPDSGGLP-ERSCMLTGTPESVQSAKRLLDQIVE 165
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 7/83 (8%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSD 90
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q ++ +D
Sbjct: 175 HGDGPGN------AVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 228
Query: 91 RRCMLSGSPDQVQEARARIEELI 113
+ ++G P +VQ+A+ + ELI
Sbjct: 229 KPLRITGDPYKVQQAKEMVLELI 251
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
VP G++IGKGG+ IK + ++GAR++ + DP+ + + G+P Q+ AR
Sbjct: 379 VPTGKTGLIIGKGGETIKSISQQSGARIELQRSPPPNADPNMKLFTIRGTPQQIDYARQL 438
Query: 109 IEELI 113
IEE I
Sbjct: 439 IEEKI 443
>gi|417403610|gb|JAA48604.1| Putative k-logy type rna binding protein [Desmodus rotundus]
Length = 647
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/112 (39%), Positives = 64/112 (57%), Gaps = 12/112 (10%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ++ + R+ F +R NE G GG E I V +P+ AVG+VIG+ G+M
Sbjct: 245 QQAKEMVLELIRDQGGFREVR--NEYGSRIGGN-----EGIDVPIPRFAVGIVIGRNGEM 297
Query: 67 IKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+QN+ G R+QF + DD + DR ++G PD+ Q A I +L+ SV
Sbjct: 298 IKKIQNDAGVRIQF---KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSV 346
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 16 IGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETG 75
+ ND+FG R M E + VP VG +IG+GG+ I ++Q E+G
Sbjct: 78 VAPQNDSFGTQLPPMHQQQSRSVMTE------EYKVPDGMVGFIIGRGGEQISRIQQESG 131
Query: 76 ARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
++Q P +R CML+G+P+ VQ A+ ++++++
Sbjct: 132 CKIQIAPDSGGLP-ERSCMLTGTPESVQSAKRLLDQIVE 169
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 7/83 (8%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSD 90
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q ++ +D
Sbjct: 179 HGDGPGN------AVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 232
Query: 91 RRCMLSGSPDQVQEARARIEELI 113
+ ++G P +VQ+A+ + ELI
Sbjct: 233 KPLRITGDPYKVQQAKEMVLELI 255
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
VP G++IGKGG+ IK + ++GAR++ + DP+ + + G+P Q+ AR
Sbjct: 383 VPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQL 442
Query: 109 IEELI 113
IEE I
Sbjct: 443 IEEKI 447
>gi|301773894|ref|XP_002922363.1| PREDICTED: far upstream element-binding protein 1-like [Ailuropoda
melanoleuca]
Length = 646
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/112 (39%), Positives = 64/112 (57%), Gaps = 12/112 (10%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ++ + R+ F +R NE G GG E I V +P+ AVG+VIG+ G+M
Sbjct: 244 QQAKEMVLELIRDQGGFREVR--NEYGSRIGGN-----EGIDVPIPRFAVGIVIGRNGEM 296
Query: 67 IKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+QN+ G R+QF + DD + DR ++G PD+ Q A I +L+ SV
Sbjct: 297 IKKIQNDAGVRIQF---KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSV 345
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R CML+G+P+ VQ A+ ++
Sbjct: 106 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP-ERSCMLTGTPESVQSAKRLLD 164
Query: 111 ELID 114
++++
Sbjct: 165 QIVE 168
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 7/83 (8%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSD 90
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q ++ +D
Sbjct: 178 HGDGPGN------AVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 231
Query: 91 RRCMLSGSPDQVQEARARIEELI 113
+ ++G P +VQ+A+ + ELI
Sbjct: 232 KPLRITGDPYKVQQAKEMVLELI 254
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
VP G++IGKGG+ IK + ++GAR++ + DP+ + + G+P Q+ AR
Sbjct: 382 VPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQL 441
Query: 109 IEELI 113
IEE I
Sbjct: 442 IEEKI 446
>gi|17557820|ref|NP_505632.1| Protein C12D8.1, isoform a [Caenorhabditis elegans]
gi|3874254|emb|CAA98232.1| Protein C12D8.1, isoform a [Caenorhabditis elegans]
Length = 589
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 52/81 (64%), Gaps = 4/81 (4%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS-DRRC-MLSGSPDQVQEA 105
+V VP+++VG++IGK GD IK+L ETG ++QF +DDPS RC ++ G+ DQ+ A
Sbjct: 230 EVVVPRSSVGIIIGKQGDTIKRLAMETGTKIQF--KPDDDPSTPERCAVIMGTRDQIYRA 287
Query: 106 RARIEELIDSVMVEQFSGANF 126
RI EL+ ++Q G N
Sbjct: 288 TERITELVKKSTMQQGGGGNV 308
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 6/66 (9%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSD--RRCMLSGSPDQVQEARA 107
+P++AVG+VIG+GG I+ +Q + G R VQM D DPS R L GS V+ A+
Sbjct: 54 IPESAVGIVIGRGGSEIQGIQAKAGCR---VQMSPDADPSSGVRMVTLEGSRSNVETAKH 110
Query: 108 RIEELI 113
I E++
Sbjct: 111 LINEVV 116
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM-LSGSPDQVQE 104
I + +P G++IGK GD I++LQ ++G ++ VQ + + + ++G P +++
Sbjct: 134 TIDIAIPPNRCGLIIGKSGDTIRQLQEKSGCKMILVQDNQSVSDQSKPLRITGDPQKIEL 193
Query: 105 ARARIEELI 113
A+ + E++
Sbjct: 194 AKQLVAEIL 202
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 39/77 (50%)
Query: 33 GDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
G+ G M + VP A G+VIGKGG+ IK++ +E+GA + + + ++
Sbjct: 306 GNVAGAMVSNEASTFYMSVPAAKCGLVIGKGGETIKQINSESGAHCELSRDPTGNADEKV 365
Query: 93 CMLSGSPDQVQEARARI 109
++ G ++ A+ I
Sbjct: 366 FVIKGGKRAIEHAKHLI 382
>gi|426215782|ref|XP_004002148.1| PREDICTED: far upstream element-binding protein 1 isoform 3 [Ovis
aries]
Length = 665
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/112 (39%), Positives = 64/112 (57%), Gaps = 12/112 (10%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ++ + R+ F +R NE G GG E I V +P+ AVG+VIG+ G+M
Sbjct: 266 QQAKEMVLELIRDQGGFREVR--NEYGSRIGGN-----EGIDVPIPRFAVGIVIGRNGEM 318
Query: 67 IKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+QN+ G R+QF + DD + DR ++G PD+ Q A I +L+ SV
Sbjct: 319 IKKIQNDAGVRIQF---KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSV 367
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 16 IGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETG 75
+ ND+FG R M E + VP VG +IG+GG+ I ++Q E+G
Sbjct: 99 VAPQNDSFGTQLPPMHQQQSRSVMTE------EYKVPDGMVGFIIGRGGEQISRIQQESG 152
Query: 76 ARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
++Q P +R CML+G+P+ VQ A+ ++++++
Sbjct: 153 CKIQIAPDSGGLP-ERSCMLTGTPESVQSAKRLLDQIVE 190
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 7/83 (8%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSD 90
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q ++ +D
Sbjct: 200 HGDGPGN------AVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 253
Query: 91 RRCMLSGSPDQVQEARARIEELI 113
+ ++G P +VQ+A+ + ELI
Sbjct: 254 KPLRITGDPYKVQQAKEMVLELI 276
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
VP G++IGKGG+ IK + ++GAR++ + DP+ + + G+P Q+ AR
Sbjct: 404 VPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQL 463
Query: 109 IEELI 113
IEE I
Sbjct: 464 IEEKI 468
>gi|390466103|ref|XP_003733520.1| PREDICTED: far upstream element-binding protein 1 isoform 2
[Callithrix jacchus]
gi|395821884|ref|XP_003784260.1| PREDICTED: far upstream element-binding protein 1 isoform 2
[Otolemur garnettii]
gi|403257698|ref|XP_003921435.1| PREDICTED: far upstream element-binding protein 1 isoform 2
[Saimiri boliviensis boliviensis]
gi|410967580|ref|XP_003990296.1| PREDICTED: far upstream element-binding protein 1 isoform 3 [Felis
catus]
Length = 665
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/112 (39%), Positives = 64/112 (57%), Gaps = 12/112 (10%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ++ + R+ F +R NE G GG E I V +P+ AVG+VIG+ G+M
Sbjct: 266 QQAKEMVLELIRDQGGFREVR--NEYGSRIGGN-----EGIDVPIPRFAVGIVIGRNGEM 318
Query: 67 IKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+QN+ G R+QF + DD + DR ++G PD+ Q A I +L+ SV
Sbjct: 319 IKKIQNDAGVRIQF---KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSV 367
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 16 IGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETG 75
+ ND+FG R M E + VP VG +IG+GG+ I ++Q E+G
Sbjct: 99 VAPQNDSFGTQLPPMHQQQSRSVMTE------EYKVPDGMVGFIIGRGGEQISRIQQESG 152
Query: 76 ARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
++Q P +R CML+G+P+ VQ A+ ++++++
Sbjct: 153 CKIQIAPDSGGLP-ERSCMLTGTPESVQSAKRLLDQIVE 190
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 7/83 (8%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSD 90
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q ++ +D
Sbjct: 200 HGDGPGN------AVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 253
Query: 91 RRCMLSGSPDQVQEARARIEELI 113
+ ++G P +VQ+A+ + ELI
Sbjct: 254 KPLRITGDPYKVQQAKEMVLELI 276
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
VP G++IGKGG+ IK + ++GAR++ + DP+ + + G+P Q+ AR
Sbjct: 404 VPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQL 463
Query: 109 IEELI 113
IEE I
Sbjct: 464 IEEKI 468
>gi|115533118|ref|NP_001041081.1| Protein C12D8.1, isoform c [Caenorhabditis elegans]
gi|82465146|emb|CAJ43440.1| Protein C12D8.1, isoform c [Caenorhabditis elegans]
Length = 548
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 52/81 (64%), Gaps = 4/81 (4%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS-DRRC-MLSGSPDQVQEA 105
+V VP+++VG++IGK GD IK+L ETG ++QF +DDPS RC ++ G+ DQ+ A
Sbjct: 189 EVVVPRSSVGIIIGKQGDTIKRLAMETGTKIQF--KPDDDPSTPERCAVIMGTRDQIYRA 246
Query: 106 RARIEELIDSVMVEQFSGANF 126
RI EL+ ++Q G N
Sbjct: 247 TERITELVKKSTMQQGGGGNV 267
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 6/66 (9%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSD--RRCMLSGSPDQVQEARA 107
+P++AVG+VIG+GG I+ +Q + G R VQM D DPS R L GS V+ A+
Sbjct: 13 IPESAVGIVIGRGGSEIQGIQAKAGCR---VQMSPDADPSSGVRMVTLEGSRSNVETAKH 69
Query: 108 RIEELI 113
I E++
Sbjct: 70 LINEVV 75
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM-LSGSPDQVQE 104
I + +P G++IGK GD I++LQ ++G ++ VQ + + + ++G P +++
Sbjct: 93 TIDIAIPPNRCGLIIGKSGDTIRQLQEKSGCKMILVQDNQSVSDQSKPLRITGDPQKIEL 152
Query: 105 ARARIEELI 113
A+ + E++
Sbjct: 153 AKQLVAEIL 161
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 39/77 (50%)
Query: 33 GDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
G+ G M + VP A G+VIGKGG+ IK++ +E+GA + + + ++
Sbjct: 265 GNVAGAMVSNEASTFYMSVPAAKCGLVIGKGGETIKQINSESGAHCELSRDPTGNADEKV 324
Query: 93 CMLSGSPDQVQEARARI 109
++ G ++ A+ I
Sbjct: 325 FVIKGGKRAIEHAKHLI 341
>gi|410924031|ref|XP_003975485.1| PREDICTED: uncharacterized protein LOC101068273 [Takifugu rubripes]
Length = 652
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 5/77 (6%)
Query: 42 VTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSP 99
V + + V VP+ AVG+VIG+ G+MIKK+QN+TG R+QF + DD S DR + G P
Sbjct: 262 VGGDSLDVPVPRFAVGIVIGRNGEMIKKIQNDTGVRIQF---KPDDGSTPDRIAQIMGPP 318
Query: 100 DQVQEARARIEELIDSV 116
+Q Q A I +L+ SV
Sbjct: 319 NQAQHAADIITDLLRSV 335
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ--MREDDPSDRRCM 94
GG+ E T+ VP G++IGKGG+ IK + ++GAR++ + DPS +
Sbjct: 360 GGLQEFTF-----TVPTVKTGLIIGKGGETIKGISQQSGARIELQRNPPPNSDPSIKMFT 414
Query: 95 LSGSPDQVQEARARIEELI 113
+ GSP Q+ AR +EE I
Sbjct: 415 VRGSPQQIDYARQLVEEKI 433
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 14/89 (15%)
Query: 29 FNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP 88
FN N DG G V ++ +P + G+VIGKGG+ IK LQ G ++ +Q D P
Sbjct: 168 FNPN-DGPG------MTVQEIMIPASKAGLVIGKGGETIKSLQERAGVKMVMIQ---DGP 217
Query: 89 ----SDRRCMLSGSPDQVQEARARIEELI 113
+D+ +SG P +VQ+A+ + +LI
Sbjct: 218 QNTGADKPLRISGEPFKVQQAKEMVMDLI 246
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I +LQ E+G ++Q P DR L+G P+ +Q A+ +
Sbjct: 98 VPDGMVGFIIGRGGEQISRLQQESGCKIQIAPDSGGMP-DRSVTLTGLPESIQTAKRLLT 156
Query: 111 ELID 114
E+++
Sbjct: 157 EIVE 160
>gi|431897017|gb|ELK06281.1| Far upstream element-binding protein 1 [Pteropus alecto]
Length = 632
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/112 (39%), Positives = 64/112 (57%), Gaps = 12/112 (10%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ++ + R+ F +R NE G GG E I V +P+ AVG+VIG+ G+M
Sbjct: 235 QQAKEMVLELIRDQGGFREVR--NEYGSRIGGN-----EGIDVPIPRFAVGIVIGRNGEM 287
Query: 67 IKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+QN+ G R+QF + DD + DR ++G PD+ Q A I +L+ SV
Sbjct: 288 IKKIQNDAGVRIQF---KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSV 336
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 7/83 (8%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSD 90
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q ++ +D
Sbjct: 169 HGDGPGN------AVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 222
Query: 91 RRCMLSGSPDQVQEARARIEELI 113
+ ++G P +VQ+A+ + ELI
Sbjct: 223 KPLRITGDPYKVQQAKEMVLELI 245
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 17/99 (17%)
Query: 16 IGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETG 75
+ ND+FG R M E + VP VG +IG+GG+ I ++Q ++G
Sbjct: 78 VAPQNDSFGTQLPPMHQQQSRSVMTE------EYKVPDGMVGFIIGRGGEQISRIQQDSG 131
Query: 76 ARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
+R CML+G+P+ VQ A+ ++++++
Sbjct: 132 GL-----------PERSCMLTGTPESVQSAKRLLDQIVE 159
>gi|354468080|ref|XP_003496495.1| PREDICTED: far upstream element-binding protein 1-like [Cricetulus
griseus]
Length = 649
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 56/96 (58%), Gaps = 11/96 (11%)
Query: 24 GNMREF-NENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ 82
G RE NE G GG E I V +P+ AVG+VIG+ G+MIKK+QN+ G R+QF
Sbjct: 265 GGFREVRNEYGSRIGGN-----EGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQF-- 317
Query: 83 MREDD--PSDRRCMLSGSPDQVQEARARIEELIDSV 116
+ DD DR ++G PD+ Q A I +L+ SV
Sbjct: 318 -KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSV 352
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R CML+G+P+ VQ A+ ++
Sbjct: 113 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP-ERSCMLTGTPESVQSAKRLLD 171
Query: 111 ELID 114
++++
Sbjct: 172 QIVE 175
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 13/87 (14%)
Query: 31 ENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP-- 88
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q D P
Sbjct: 184 HHGDGPGNA------VQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQ---DGPQN 234
Query: 89 --SDRRCMLSGSPDQVQEARARIEELI 113
+D+ ++G P +VQ+A+ + ELI
Sbjct: 235 TGADKPLRITGDPYKVQQAKEMVLELI 261
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCM 94
GG+ E + VP G++IGKGG+ IK + ++GAR++ + DP+ +
Sbjct: 380 GGLQEFNF-----IVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFT 434
Query: 95 LSGSPDQVQEARARIEELI 113
+ G+P Q+ AR IEE I
Sbjct: 435 IRGTPQQIDYARQLIEEKI 453
>gi|83320094|ref|NP_001032742.1| far upstream element-binding protein 1 [Rattus norvegicus]
gi|123780056|sp|Q32PX7.1|FUBP1_RAT RecName: Full=Far upstream element-binding protein 1; Short=FBP;
Short=FUSE-binding protein 1
gi|79160170|gb|AAI07943.1| Far upstream element (FUSE) binding protein 1 [Rattus norvegicus]
Length = 639
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 56/96 (58%), Gaps = 11/96 (11%)
Query: 24 GNMREF-NENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ 82
G RE NE G GG E I V +P+ AVG+VIG+ G+MIKK+QN+ G R+QF
Sbjct: 254 GGFREVRNEYGSRIGGN-----EGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQF-- 306
Query: 83 MREDD--PSDRRCMLSGSPDQVQEARARIEELIDSV 116
+ DD DR ++G PD+ Q A I +L+ SV
Sbjct: 307 -KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSV 341
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R CML+G+P+ VQ A+ ++
Sbjct: 102 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP-ERSCMLTGTPESVQSAKRLLD 160
Query: 111 ELID 114
++++
Sbjct: 161 QIVE 164
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 13/87 (14%)
Query: 31 ENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP-- 88
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q D P
Sbjct: 173 HHGDGPGNA------VQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQ---DGPQN 223
Query: 89 --SDRRCMLSGSPDQVQEARARIEELI 113
+D+ ++G P +VQ+A+ + ELI
Sbjct: 224 TGADKPLRITGDPYKVQQAKEMVLELI 250
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCM 94
GG+ E + VP G++IGKGG+ IK + ++GAR++ + DP+ +
Sbjct: 369 GGLQEFNF-----IVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFT 423
Query: 95 LSGSPDQVQEARARIEELI 113
+ G+P Q+ AR IEE I
Sbjct: 424 IRGTPQQIDYARQLIEEKI 442
>gi|344237478|gb|EGV93581.1| Far upstream element-binding protein 1 [Cricetulus griseus]
Length = 449
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 56/96 (58%), Gaps = 11/96 (11%)
Query: 24 GNMREF-NENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ 82
G RE NE G GG E I V +P+ AVG+VIG+ G+MIKK+QN+ G R+QF
Sbjct: 234 GGFREVRNEYGSRIGG-----NEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQF-- 286
Query: 83 MREDD--PSDRRCMLSGSPDQVQEARARIEELIDSV 116
+ DD DR ++G PD+ Q A I +L+ SV
Sbjct: 287 -KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSV 321
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 16 IGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETG 75
+ ND+FG R M E + VP VG +IG+GG+ I ++Q E+G
Sbjct: 53 VAPQNDSFGAQLPPMHQQQSRSVMTE------EYKVPDGMVGFIIGRGGEQISRIQQESG 106
Query: 76 ARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
++Q P +R CML+G+P+ VQ A+ ++++++
Sbjct: 107 CKIQIAPDSGGLP-ERSCMLTGTPESVQSAKRLLDQIVE 144
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 13/87 (14%)
Query: 31 ENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP-- 88
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q D P
Sbjct: 153 HHGDGPGNA------VQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQ---DGPQN 203
Query: 89 --SDRRCMLSGSPDQVQEARARIEELI 113
+D+ ++G P +VQ+A+ + ELI
Sbjct: 204 TGADKPLRITGDPYKVQQAKEMVLELI 230
>gi|112180378|gb|AAH23780.1| Far upstream element (FUSE) binding protein 1 [Mus musculus]
gi|148679987|gb|EDL11934.1| far upstream element (FUSE) binding protein 1, isoform CRA_c [Mus
musculus]
Length = 640
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 56/96 (58%), Gaps = 11/96 (11%)
Query: 24 GNMREF-NENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ 82
G RE NE G GG E I V +P+ AVG+VIG+ G+MIKK+QN+ G R+QF
Sbjct: 255 GGFREVRNEYGSRIGGN-----EGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQF-- 307
Query: 83 MREDD--PSDRRCMLSGSPDQVQEARARIEELIDSV 116
+ DD DR ++G PD+ Q A I +L+ SV
Sbjct: 308 -KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSV 342
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 7/95 (7%)
Query: 20 NDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQ 79
ND+FG R M E + VP VG +IG+GG+ I ++Q E+G ++Q
Sbjct: 78 NDSFGAQLPPMHQQQSRSVMTE------EYKVPDGMVGFIIGRGGEQISRIQQESGCKIQ 131
Query: 80 FVQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
P +R CML+G+P+ VQ A+ ++++++
Sbjct: 132 IAPDSGGLP-ERSCMLTGTPESVQSAKRLLDQIVE 165
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 13/87 (14%)
Query: 31 ENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP-- 88
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q D P
Sbjct: 174 HHGDGPGNA------VQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQ---DGPQN 224
Query: 89 --SDRRCMLSGSPDQVQEARARIEELI 113
+D+ ++G P +VQ+A+ + ELI
Sbjct: 225 TGADKPLRITGDPYKVQQAKEMVLELI 251
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCM 94
GG+ E + VP G++IGKGG+ IK + ++GAR++ + DP+ +
Sbjct: 370 GGLQEFNF-----IVPTGKTGLIIGKGGETIKSISQQSGARIELQRSPPPNADPNMKLFT 424
Query: 95 LSGSPDQVQEARARIEELI 113
+ G+P Q+ AR IEE I
Sbjct: 425 IRGTPQQIDYARQLIEEKI 443
>gi|449275835|gb|EMC84592.1| Far upstream element-binding protein 1, partial [Columba livia]
Length = 611
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 56/96 (58%), Gaps = 11/96 (11%)
Query: 24 GNMREF-NENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ 82
G RE NE G GG E I V +P+ AVG+VIG+ G+MIKK+QN+ G R+QF
Sbjct: 220 GGFREVRNEYGSRIGGN-----EGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQF-- 272
Query: 83 MREDD--PSDRRCMLSGSPDQVQEARARIEELIDSV 116
+ DD DR ++G PD+ Q A I +L+ SV
Sbjct: 273 -KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSV 307
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 16 IGRNNDNFGN-MREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNET 74
+ ND+FGN + + R M E + VP VG +IG+GG+ I ++Q E+
Sbjct: 38 VAPQNDSFGNQLPPPPMHQQQRSVMTE------EYKVPDGMVGFIIGRGGEQISRIQQES 91
Query: 75 GARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
G ++Q P +R CML+G+P+ VQ A+ ++++++
Sbjct: 92 GCKIQIAPDSGGLP-ERSCMLTGTPESVQSAKRLLDQIVE 130
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 13/87 (14%)
Query: 31 ENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP-- 88
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q D P
Sbjct: 139 HHGDGPGNA------VQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQ---DGPQN 189
Query: 89 --SDRRCMLSGSPDQVQEARARIEELI 113
+D+ ++G P +VQ+A+ + ELI
Sbjct: 190 TGADKPLRITGDPYKVQQAKEMVLELI 216
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 13/85 (15%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKG------GDMIKKLQNETGARVQFVQMRED--DP 88
GG+ E + VP G++IGKG G+ IK + ++GAR++ + DP
Sbjct: 335 GGLQEFNF-----IVPTGKTGLIIGKGNISYIRGETIKSISQQSGARIELQRNPPPNADP 389
Query: 89 SDRRCMLSGSPDQVQEARARIEELI 113
+ + + G+P Q+ AR IEE I
Sbjct: 390 NMKMFTIRGTPQQIDYARQLIEEKI 414
>gi|432848278|ref|XP_004066266.1| PREDICTED: far upstream element-binding protein 2-like [Oryzias
latipes]
Length = 584
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 61/116 (52%), Gaps = 14/116 (12%)
Query: 18 RNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGAR 77
R++ FG+ E+ G G I++ VP+ +VGVVIG+ G+MIKK+QN+ G +
Sbjct: 253 RDHAGFGDRSEYGSRMGGGG---------IEIPVPRQSVGVVIGRNGEMIKKIQNDAGVK 303
Query: 78 VQFVQMREDD--PSDRRCMLSGSPDQVQEARARIEELIDSVMVEQFSGANFDKLRS 131
+QF + DD ++ + G PDQ Q A + I +L+ S+ G D S
Sbjct: 304 IQF---KPDDGTAPEKIAHIMGPPDQCQHAVSIINDLLQSIRARDEGGQGADPPAS 356
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP + VG++IG+GG+ I K+Q+E+G +VQ P +R L+GS D +Q ARA I+
Sbjct: 107 VPDSMVGLIIGRGGEQINKIQHESGCKVQIAHDSAGLP-ERSISLTGSLDAIQRARALID 165
Query: 111 ELI 113
E++
Sbjct: 166 EIV 168
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%)
Query: 40 WEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSP 99
W + +P G+VIG+GG+ IK + +TGA V+ + DP+ + + GSP
Sbjct: 373 WGPPGGEMTFSIPAHKCGIVIGRGGENIKSISQQTGAFVEVCRQPNGDPNFKLFTIRGSP 432
Query: 100 DQVQEARARIEELID 114
++ A+ IEE I+
Sbjct: 433 QEIDHAKQLIEEKIE 447
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS-DRRCMLSGSPDQVQEAR 106
++ +P G++IGKGG+ IK+LQ G ++ +Q P+ D+ + G P +VQ+A+
Sbjct: 184 EMIIPAGKAGLIIGKGGETIKQLQERAGVKMILIQDGSQPPNVDKPLRIIGDPYKVQQAK 243
Query: 107 ARIEELI 113
+ E++
Sbjct: 244 EMVNEIL 250
>gi|291398647|ref|XP_002715950.1| PREDICTED: far upstream element-binding protein [Oryctolagus
cuniculus]
Length = 643
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/112 (39%), Positives = 64/112 (57%), Gaps = 12/112 (10%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ++ + R+ F +R NE G GG E I V +P+ AVG+VIG+ G+M
Sbjct: 244 QQAKEMVLELIRDQGGFREVR--NEYGSRIGGN-----EGIDVPIPRFAVGIVIGRNGEM 296
Query: 67 IKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+QN+ G R+QF + DD + DR ++G PD+ Q A I +L+ SV
Sbjct: 297 IKKIQNDAGVRIQF---KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSV 345
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R CML+G+P+ VQ A+ ++
Sbjct: 106 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP-ERSCMLTGTPESVQSAKRLLD 164
Query: 111 ELID 114
++++
Sbjct: 165 QIVE 168
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 7/83 (8%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSD 90
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q ++ +D
Sbjct: 178 HGDGPGN------AVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 231
Query: 91 RRCMLSGSPDQVQEARARIEELI 113
+ ++G P +VQ+A+ + ELI
Sbjct: 232 KPLRITGDPYKVQQAKEMVLELI 254
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
VP G++IGKGG+ IK + ++GAR++ + DP+ + + G+P Q+ AR
Sbjct: 382 VPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQL 441
Query: 109 IEELI 113
IEE I
Sbjct: 442 IEEKI 446
>gi|84662730|ref|NP_476513.2| far upstream element-binding protein 1 [Mus musculus]
gi|74144333|dbj|BAE36030.1| unnamed protein product [Mus musculus]
Length = 642
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 56/96 (58%), Gaps = 11/96 (11%)
Query: 24 GNMREF-NENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ 82
G RE NE G GG E I V +P+ AVG+VIG+ G+MIKK+QN+ G R+QF
Sbjct: 254 GGFREVRNEYGSRIGGN-----EGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQF-- 306
Query: 83 MREDD--PSDRRCMLSGSPDQVQEARARIEELIDSV 116
+ DD DR ++G PD+ Q A I +L+ SV
Sbjct: 307 -KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSV 341
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R CML+G+P+ VQ A+ ++
Sbjct: 102 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP-ERSCMLTGTPESVQSAKRLLD 160
Query: 111 ELID 114
++++
Sbjct: 161 QIVE 164
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 13/87 (14%)
Query: 31 ENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP-- 88
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q D P
Sbjct: 173 HHGDGPGNA------VQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQ---DGPQN 223
Query: 89 --SDRRCMLSGSPDQVQEARARIEELI 113
+D+ ++G P +VQ+A+ + ELI
Sbjct: 224 TGADKPLRITGDPYKVQQAKEMVLELI 250
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCM 94
GG+ E + VP G++IGKGG+ IK + ++GAR++ + DP+ +
Sbjct: 369 GGLQEFNF-----IVPTGKTGLIIGKGGETIKSISQQSGARIELQRSPPPNADPNMKLFT 423
Query: 95 LSGSPDQVQEARARIEELI 113
+ G+P Q+ AR IEE I
Sbjct: 424 IRGTPQQIDYARQLIEEKI 442
>gi|390466101|ref|XP_002751042.2| PREDICTED: far upstream element-binding protein 1 isoform 1
[Callithrix jacchus]
gi|395821882|ref|XP_003784259.1| PREDICTED: far upstream element-binding protein 1 isoform 1
[Otolemur garnettii]
gi|403257696|ref|XP_003921434.1| PREDICTED: far upstream element-binding protein 1 isoform 1
[Saimiri boliviensis boliviensis]
gi|410967576|ref|XP_003990294.1| PREDICTED: far upstream element-binding protein 1 isoform 1 [Felis
catus]
Length = 644
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/112 (39%), Positives = 64/112 (57%), Gaps = 12/112 (10%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ++ + R+ F +R NE G GG E I V +P+ AVG+VIG+ G+M
Sbjct: 245 QQAKEMVLELIRDQGGFREVR--NEYGSRIGGN-----EGIDVPIPRFAVGIVIGRNGEM 297
Query: 67 IKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+QN+ G R+QF + DD + DR ++G PD+ Q A I +L+ SV
Sbjct: 298 IKKIQNDAGVRIQF---KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSV 346
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 16 IGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETG 75
+ ND+FG R M E + VP VG +IG+GG+ I ++Q E+G
Sbjct: 78 VAPQNDSFGTQLPPMHQQQSRSVMTE------EYKVPDGMVGFIIGRGGEQISRIQQESG 131
Query: 76 ARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
++Q P +R CML+G+P+ VQ A+ ++++++
Sbjct: 132 CKIQIAPDSGGLP-ERSCMLTGTPESVQSAKRLLDQIVE 169
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 7/83 (8%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSD 90
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q ++ +D
Sbjct: 179 HGDGPGN------AVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 232
Query: 91 RRCMLSGSPDQVQEARARIEELI 113
+ ++G P +VQ+A+ + ELI
Sbjct: 233 KPLRITGDPYKVQQAKEMVLELI 255
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
VP G++IGKGG+ IK + ++GAR++ + DP+ + + G+P Q+ AR
Sbjct: 383 VPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQL 442
Query: 109 IEELI 113
IEE I
Sbjct: 443 IEEKI 447
>gi|348586742|ref|XP_003479127.1| PREDICTED: far upstream element-binding protein 1-like [Cavia
porcellus]
Length = 643
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 56/96 (58%), Gaps = 11/96 (11%)
Query: 24 GNMREF-NENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ 82
G RE NE G GG E I V +P+ AVG+VIG+ G+MIKK+QN+ G R+QF
Sbjct: 258 GGFREVRNEYGSRIGGN-----EGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQF-- 310
Query: 83 MREDD--PSDRRCMLSGSPDQVQEARARIEELIDSV 116
+ DD DR ++G PD+ Q A I +L+ SV
Sbjct: 311 -KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSV 345
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R CML+G+P+ VQ A+ ++
Sbjct: 106 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP-ERSCMLTGTPESVQSAKRLLD 164
Query: 111 ELID 114
++++
Sbjct: 165 QIVE 168
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 13/87 (14%)
Query: 31 ENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP-- 88
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q D P
Sbjct: 177 HHGDGPGNA------VQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQ---DGPQN 227
Query: 89 --SDRRCMLSGSPDQVQEARARIEELI 113
+D+ ++G P +VQ+A+ + ELI
Sbjct: 228 TGADKPLRITGDPYKVQQAKEMVLELI 254
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCM 94
GG+ E + VP G++IGKGG+ IK + ++GAR++ + DP+ +
Sbjct: 373 GGLQEFNF-----IVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFT 427
Query: 95 LSGSPDQVQEARARIEELI 113
+ G+P Q+ AR IEE I
Sbjct: 428 IRGTPQQIDYARQLIEEKI 446
>gi|338725292|ref|XP_001496721.3| PREDICTED: far upstream element-binding protein 1 [Equus caballus]
Length = 644
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/112 (39%), Positives = 64/112 (57%), Gaps = 12/112 (10%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ++ + R+ F +R NE G GG E I V +P+ AVG+VIG+ G+M
Sbjct: 244 QQAKEMVLELIRDQGGFREVR--NEYGSRIGGN-----EGIDVPIPRFAVGIVIGRNGEM 296
Query: 67 IKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+QN+ G R+QF + DD + DR ++G PD+ Q A I +L+ SV
Sbjct: 297 IKKIQNDAGVRIQF---KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSV 345
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R CML+G+P+ VQ A+ ++
Sbjct: 106 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP-ERSCMLTGTPESVQSAKRLLD 164
Query: 111 ELID 114
++++
Sbjct: 165 QIVE 168
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 7/83 (8%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSD 90
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q ++ +D
Sbjct: 178 HGDGPGN------AVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 231
Query: 91 RRCMLSGSPDQVQEARARIEELI 113
+ ++G P +VQ+A+ + ELI
Sbjct: 232 KPLRITGDPYKVQQAKEMVLELI 254
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
VP G++IGKGG+ IK + ++GAR++ + DP+ + + G+P Q+ AR
Sbjct: 382 VPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQL 441
Query: 109 IEELI 113
IEE I
Sbjct: 442 IEEKI 446
>gi|311259162|ref|XP_003127965.1| PREDICTED: far upstream element-binding protein 1 [Sus scrofa]
gi|426215778|ref|XP_004002146.1| PREDICTED: far upstream element-binding protein 1 isoform 1 [Ovis
aries]
Length = 644
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/112 (39%), Positives = 64/112 (57%), Gaps = 12/112 (10%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ++ + R+ F +R NE G GG E I V +P+ AVG+VIG+ G+M
Sbjct: 245 QQAKEMVLELIRDQGGFREVR--NEYGSRIGGN-----EGIDVPIPRFAVGIVIGRNGEM 297
Query: 67 IKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+QN+ G R+QF + DD + DR ++G PD+ Q A I +L+ SV
Sbjct: 298 IKKIQNDAGVRIQF---KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSV 346
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 16 IGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETG 75
+ ND+FG R M E + VP VG +IG+GG+ I ++Q E+G
Sbjct: 78 VAPQNDSFGTQLPPMHQQQSRSVMTE------EYKVPDGMVGFIIGRGGEQISRIQQESG 131
Query: 76 ARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
++Q P +R CML+G+P+ VQ A+ ++++++
Sbjct: 132 CKIQIAPDSGGLP-ERSCMLTGTPESVQSAKRLLDQIVE 169
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 7/83 (8%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSD 90
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q ++ +D
Sbjct: 179 HGDGPGN------AVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 232
Query: 91 RRCMLSGSPDQVQEARARIEELI 113
+ ++G P +VQ+A+ + ELI
Sbjct: 233 KPLRITGDPYKVQQAKEMVLELI 255
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
VP G++IGKGG+ IK + ++GAR++ + DP+ + + G+P Q+ AR
Sbjct: 383 VPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQL 442
Query: 109 IEELI 113
IEE I
Sbjct: 443 IEEKI 447
>gi|116003917|ref|NP_001070314.1| far upstream element-binding protein 1 [Bos taurus]
gi|115305288|gb|AAI23717.1| Far upstream element (FUSE) binding protein 1 [Bos taurus]
Length = 643
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/112 (39%), Positives = 64/112 (57%), Gaps = 12/112 (10%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ++ + R+ F +R NE G GG E I V +P+ AVG+VIG+ G+M
Sbjct: 244 QQAKEMVLELIRDQGGFREVR--NEYGSRIGGN-----EGIDVPIPRFAVGIVIGRNGEM 296
Query: 67 IKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+QN+ G R+QF + DD + DR ++G PD+ Q A I +L+ SV
Sbjct: 297 IKKIQNDAGVRIQF---KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSV 345
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R CML+G+P+ VQ A+ ++
Sbjct: 106 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP-ERSCMLTGTPESVQSAKRLLD 164
Query: 111 ELID 114
++++
Sbjct: 165 QIVE 168
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 7/83 (8%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSD 90
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q ++ +D
Sbjct: 178 HGDGPGN------AVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 231
Query: 91 RRCMLSGSPDQVQEARARIEELI 113
+ ++G P +VQ+A+ + ELI
Sbjct: 232 KPLRITGDPYKVQQAKEMVLELI 254
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
VP G++IGKGG+ IK + ++GAR++ + DP+ + + G+P Q+ AR
Sbjct: 382 VPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQL 441
Query: 109 IEELI 113
IEE I
Sbjct: 442 IEEKI 446
>gi|449508372|ref|XP_002188229.2| PREDICTED: far upstream element-binding protein 1 [Taeniopygia
guttata]
Length = 592
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 56/96 (58%), Gaps = 11/96 (11%)
Query: 24 GNMREF-NENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ 82
G RE NE G GG E I V +P+ AVG+VIG+ G+MIKK+QN+ G R+QF
Sbjct: 206 GGFREVRNEYGSRIGGN-----EGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQF-- 258
Query: 83 MREDD--PSDRRCMLSGSPDQVQEARARIEELIDSV 116
+ DD DR ++G PD+ Q A I +L+ SV
Sbjct: 259 -KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSV 293
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R CML+G+P+ VQ A+ ++
Sbjct: 54 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP-ERSCMLTGTPESVQSAKRLLD 112
Query: 111 ELID 114
++++
Sbjct: 113 QIVE 116
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 13/87 (14%)
Query: 31 ENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP-- 88
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q D P
Sbjct: 125 HHGDGPGNA------VQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQ---DGPQN 175
Query: 89 --SDRRCMLSGSPDQVQEARARIEELI 113
+D+ ++G P +VQ+A+ + ELI
Sbjct: 176 TGADKPLRITGDPYKVQQAKEMVLELI 202
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCM 94
GG+ E + VP G++IGKGG+ IK + ++GAR++ + DP+ +
Sbjct: 321 GGLQEFNF-----IVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKMFT 375
Query: 95 LSGSPDQVQEARARIEELI 113
+ G+P Q+ AR IEE I
Sbjct: 376 IRGTPQQIDYARQLIEEKI 394
>gi|359319788|ref|XP_003639165.1| PREDICTED: far upstream element-binding protein 1-like [Canis lupus
familiaris]
Length = 663
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/112 (39%), Positives = 64/112 (57%), Gaps = 12/112 (10%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ++ + R+ F +R NE G GG E I V +P+ AVG+VIG+ G+M
Sbjct: 244 QQAKEMVLELIRDQGGFREVR--NEYGSRIGGN-----EGIDVPIPRFAVGIVIGRNGEM 296
Query: 67 IKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+QN+ G R+QF + DD + DR ++G PD+ Q A I +L+ SV
Sbjct: 297 IKKIQNDAGVRIQF---KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSV 345
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R CML+G+P+ VQ A+ ++
Sbjct: 106 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP-ERSCMLTGTPESVQSAKRLLD 164
Query: 111 ELID 114
++++
Sbjct: 165 QIVE 168
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 7/83 (8%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSD 90
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q ++ +D
Sbjct: 178 HGDGPGN------AVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 231
Query: 91 RRCMLSGSPDQVQEARARIEELI 113
+ ++G P +VQ+A+ + ELI
Sbjct: 232 KPLRITGDPYKVQQAKEMVLELI 254
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
VP G++IGKGG+ IK + ++GAR++ + DP+ + + G+P Q+ AR
Sbjct: 382 VPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQL 441
Query: 109 IEELI 113
IEE I
Sbjct: 442 IEEKI 446
>gi|344278782|ref|XP_003411171.1| PREDICTED: far upstream element-binding protein 1 [Loxodonta
africana]
Length = 642
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 56/96 (58%), Gaps = 11/96 (11%)
Query: 24 GNMREF-NENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ 82
G RE NE G GG E I V +P+ AVG+VIG+ G+MIKK+QN+ G R+QF
Sbjct: 257 GGFREVRNEYGSRIGGN-----EGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQF-- 309
Query: 83 MREDD--PSDRRCMLSGSPDQVQEARARIEELIDSV 116
+ DD DR ++G PD+ Q A I +L+ SV
Sbjct: 310 -KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSV 344
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 16 IGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETG 75
+ ND+FG R M E + VP VG +IG+GG+ I ++Q E+G
Sbjct: 76 VAPQNDSFGTQLPPMHQQQSRSVMTE------EYKVPDGMVGFIIGRGGEQISRIQQESG 129
Query: 76 ARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
++Q P +R CML+G+P+ VQ A+ ++++++
Sbjct: 130 CKIQIAPDSGGLP-ERSCMLTGTPESVQSAKRLLDQIVE 167
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 13/87 (14%)
Query: 31 ENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP-- 88
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q D P
Sbjct: 176 HHGDGPGNA------VQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQ---DGPQN 226
Query: 89 --SDRRCMLSGSPDQVQEARARIEELI 113
+D+ ++G P +VQ+A+ + ELI
Sbjct: 227 TGADKPLRITGDPYKVQQAKEMVLELI 253
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCM 94
GG+ E + VP G++IGKGG+ IK + ++GAR++ + DP+ +
Sbjct: 372 GGLQEFNF-----IVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFT 426
Query: 95 LSGSPDQVQEARARIEELI 113
+ G+P Q+ AR IEE I
Sbjct: 427 IRGTPQQIDYARQLIEEKI 445
>gi|395536741|ref|XP_003770370.1| PREDICTED: far upstream element-binding protein 1 [Sarcophilus
harrisii]
Length = 621
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 56/96 (58%), Gaps = 11/96 (11%)
Query: 24 GNMREF-NENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ 82
G RE NE G GG E I V +P+ AVG+VIG+ G+MIKK+QN+ G R+QF
Sbjct: 236 GGFREVRNEYGSRIGGN-----EGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQF-- 288
Query: 83 MREDD--PSDRRCMLSGSPDQVQEARARIEELIDSV 116
+ DD DR ++G PD+ Q A I +L+ SV
Sbjct: 289 -KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSV 323
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R CML+G+P+ VQ A+ ++
Sbjct: 84 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP-ERSCMLTGTPESVQSAKRLLD 142
Query: 111 ELID 114
++++
Sbjct: 143 QIVE 146
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 13/87 (14%)
Query: 31 ENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP-- 88
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q D P
Sbjct: 155 HHGDGPGNA------VQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQ---DGPQN 205
Query: 89 --SDRRCMLSGSPDQVQEARARIEELI 113
+D+ ++G P +VQ+A+ + ELI
Sbjct: 206 TGADKPLRITGDPYKVQQAKEMVLELI 232
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCM 94
GG+ E + VP G++IGKGG+ IK + ++GAR++ + DP+ +
Sbjct: 351 GGLQEFNF-----IVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFT 405
Query: 95 LSGSPDQVQEARARIEELI 113
+ G+P Q+ AR IEE I
Sbjct: 406 IRGTPQQIDYARQLIEEKI 424
>gi|296489207|tpg|DAA31320.1| TPA: far upstream element-binding protein [Bos taurus]
Length = 610
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 56/96 (58%), Gaps = 11/96 (11%)
Query: 24 GNMREF-NENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ 82
G RE NE G GG E I V +P+ AVG+VIG+ G+MIKK+QN+ G R+QF
Sbjct: 258 GGFREVRNEYGSRIGGN-----EGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQF-- 310
Query: 83 MREDD--PSDRRCMLSGSPDQVQEARARIEELIDSV 116
+ DD DR ++G PD+ Q A I +L+ SV
Sbjct: 311 -KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSV 345
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R CML+G+P+ VQ A+ ++
Sbjct: 106 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP-ERSCMLTGTPESVQSAKRLLD 164
Query: 111 ELID 114
++++
Sbjct: 165 QIVE 168
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 13/87 (14%)
Query: 31 ENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP-- 88
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q D P
Sbjct: 177 HHGDGPGNA------VQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQ---DGPQN 227
Query: 89 --SDRRCMLSGSPDQVQEARARIEELI 113
+D+ ++G P +VQ+A+ + ELI
Sbjct: 228 TGADKPLRITGDPYKVQQAKEMVLELI 254
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCM 94
GG+ E + VP G++IGKGG+ IK + ++GAR++ + DP+ +
Sbjct: 373 GGLQEFNF-----IVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFT 427
Query: 95 LSGSPDQVQEARARIEELI 113
+ G+P Q+ AR IEE I
Sbjct: 428 IRGTPQQIDYARQLIEEKI 446
>gi|355689343|gb|AER98802.1| far upstream element binding protein 1 [Mustela putorius furo]
Length = 593
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 56/96 (58%), Gaps = 11/96 (11%)
Query: 24 GNMREF-NENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ 82
G RE NE G GG E I V +P+ AVG+VIG+ G+MIKK+QN+ G R+QF
Sbjct: 258 GGFREVRNEYGSRIGGN-----EGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQF-- 310
Query: 83 MREDD--PSDRRCMLSGSPDQVQEARARIEELIDSV 116
+ DD DR ++G PD+ Q A I +L+ SV
Sbjct: 311 -KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSV 345
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R CML+G+P+ VQ A+ ++
Sbjct: 106 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP-ERSCMLTGTPESVQSAKRLLD 164
Query: 111 ELID 114
++++
Sbjct: 165 QIVE 168
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 13/87 (14%)
Query: 31 ENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP-- 88
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q D P
Sbjct: 177 HHGDGPGNA------VQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQ---DGPQN 227
Query: 89 --SDRRCMLSGSPDQVQEARARIEELI 113
+D+ ++G P +VQ+A+ + ELI
Sbjct: 228 TGADKPLRITGDPYKVQQAKEMVLELI 254
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCM 94
GG+ E + VP G++IGKGG+ IK + ++GAR++ + DP+ +
Sbjct: 373 GGLQEFNF-----IVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFT 427
Query: 95 LSGSPDQVQEARARIEELI 113
+ G+P Q+ AR IEE I
Sbjct: 428 IRGTPQQIDYARQLIEEKI 446
>gi|194377024|dbj|BAG63073.1| unnamed protein product [Homo sapiens]
Length = 642
Score = 63.5 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 43/112 (38%), Positives = 64/112 (57%), Gaps = 12/112 (10%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ++ + R+ F +R NE G GG E I V +P+ AVG+VIG+ G+M
Sbjct: 244 QQAKEMVLELIRDQGGFREVR--NEYGSRIGGN-----EGIDVPIPRFAVGIVIGRNGEM 296
Query: 67 IKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+QN+ G R+QF + DD + +R ++G PD+ Q A I +L+ SV
Sbjct: 297 IKKIQNDAGVRIQF---KPDDGTTPERIAQITGPPDRCQHAAEIITDLLRSV 345
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R CML+G+P+ VQ A+ ++
Sbjct: 106 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP-ERSCMLTGTPESVQSAKRLLD 164
Query: 111 ELID 114
++++
Sbjct: 165 QIVE 168
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 13/86 (15%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--- 88
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q D P
Sbjct: 178 HGDGPGN------AVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQ---DGPQNT 228
Query: 89 -SDRRCMLSGSPDQVQEARARIEELI 113
+D+ ++G P +VQ+A+ + ELI
Sbjct: 229 GADKPLRITGDPYKVQQAKEMVLELI 254
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
VP G++IGKGG+ IK + ++GAR++ + DP+ + + G+P Q+ AR
Sbjct: 382 VPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQL 441
Query: 109 IEELI 113
IEE I
Sbjct: 442 IEEKI 446
>gi|147905884|ref|NP_001082897.1| far upstream element-binding protein 2 [Danio rerio]
gi|141795754|gb|AAI39702.1| MGC163038 protein [Danio rerio]
Length = 666
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 50/74 (67%), Gaps = 5/74 (6%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQE 104
I+V VP+ +VGVVIG+ G+MIKK+QN+ G R+QF + DD + D+ + G PD+ +
Sbjct: 296 IEVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQF---KPDDGTGPDKIAHIMGPPDRCEH 352
Query: 105 ARARIEELIDSVMV 118
A + I EL+ S+ V
Sbjct: 353 AASIINELLQSIRV 366
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 8/91 (8%)
Query: 24 GNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM 83
G F+E+ +G G M E+ +P G++IGKGG+ IK+LQ G ++ +Q
Sbjct: 179 GTPPSFHESTNGSGHMQEM-------VIPAGKAGLIIGKGGETIKQLQERAGVKMILIQD 231
Query: 84 REDDPS-DRRCMLSGSPDQVQEARARIEELI 113
P+ D+ + G P +VQ+AR ++E++
Sbjct: 232 ASQGPNMDKPLRIIGDPYKVQQAREMVQEIL 262
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q ++G +VQ P DR ++G P+ +Q+A+ ++
Sbjct: 113 VPDGMVGLIIGRGGEQINKIQQDSGCKVQIAPDSGGLP-DRSVSITGGPEAIQKAKMMLD 171
Query: 111 ELI 113
+++
Sbjct: 172 DIV 174
Score = 42.0 bits (97), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 50 CVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCMLSGSPDQVQEARA 107
+P G+VIG+GG+ +K + +TGA V+ + DP+ + + GSP Q+ A+
Sbjct: 408 SIPAHKCGLVIGRGGENVKAINQQTGAFVEISRQPPPNGDPNFKLFTIRGSPQQIDHAKQ 467
Query: 108 RIEELID 114
IE+ I+
Sbjct: 468 LIEDKIE 474
>gi|47085903|ref|NP_998309.1| far upstream element-binding protein 1 [Danio rerio]
gi|40555849|gb|AAH64649.1| Far upstream element (FUSE) binding protein 1 [Danio rerio]
Length = 642
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 49/74 (66%), Gaps = 5/74 (6%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
E + V VP+ AVG+VIG+ G+MIKK+QN+TG R+QF + DD S +R + G PD+
Sbjct: 268 ESLDVPVPRFAVGIVIGRSGEMIKKIQNDTGVRIQF---KPDDGSTPERIAQIMGPPDRA 324
Query: 103 QEARARIEELIDSV 116
Q A I +L+ SV
Sbjct: 325 QHAADIITDLLRSV 338
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I +LQ E+G ++Q P DR L+GSPD + A+ +
Sbjct: 96 VPDGMVGFIIGRGGEQISRLQQESGCKIQIAPDSGGMP-DRSVTLTGSPDAIMTAKRLLS 154
Query: 111 ELID 114
E+++
Sbjct: 155 EIVE 158
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ--MREDDPSDRRCM 94
GG+ E T+ VP G++IGKGG+ IK + ++GAR++ + DP+ +
Sbjct: 372 GGLQEFTF-----TVPTMKTGLIIGKGGETIKNISQQSGARIELQRNPPPNSDPNIKIFT 426
Query: 95 LSGSPDQVQEARARIEELI 113
+ GSP Q+ AR +EE I
Sbjct: 427 VRGSPQQIDYARQLVEEKI 445
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 14/89 (15%)
Query: 29 FNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP 88
F+ N DG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q D P
Sbjct: 166 FHHN-DGPG------MSVHEMMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQ---DGP 215
Query: 89 ----SDRRCMLSGSPDQVQEARARIEELI 113
+D+ +SG P +VQ+A+ + +LI
Sbjct: 216 QNTGADKPLRISGDPFKVQQAKDMVMDLI 244
>gi|339236169|ref|XP_003379639.1| putative KH domain protein [Trichinella spiralis]
gi|316977680|gb|EFV60751.1| putative KH domain protein [Trichinella spiralis]
Length = 614
Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 67/112 (59%), Gaps = 10/112 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLS 96
G + + + ++ +V VPK AVG +IG+GG+ I++L +E+GAR+QF + + +R ++S
Sbjct: 281 GSLTDASKKIGEVIVPKHAVGSIIGRGGETIRRLTSESGARIQFKIGEDHNAPERTAVIS 340
Query: 97 GSPDQVQEARARIEELID---SVMVEQ-------FSGANFDKLRSTVLANRS 138
G+ +Q+ A I +L++ SV++E+ F G + D V AN++
Sbjct: 341 GTMEQIDRATRMITDLVNKSASVLLEESAYDCCNFEGCDSDIFYMHVPANKT 392
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSD---RRCMLSGSPDQVQEARA 107
VP + VG++IG+GG+ I ++Q+E+G RVQ Q D + R C L+G V++A+
Sbjct: 98 VPDSCVGLIIGRGGESINQIQSESGCRVQMSQTPPFDVNGKPMRGCTLTGPSSSVEKAKQ 157
Query: 108 RIEELI 113
I ++
Sbjct: 158 MISSIV 163
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSD--RRCMLSGSPDQVQEA 105
++ +P G+VIGKGG+ IK LQ G ++ +Q + PS + + G P++V+ A
Sbjct: 205 EMFIPGTKCGLVIGKGGETIKSLQERAGVKMVMIQ-ESNQPSGLPKPLRIIGEPNKVEYA 263
Query: 106 RARIEELIDS 115
+ IEE+++S
Sbjct: 264 KQLIEEIMNS 273
Score = 42.4 bits (98), Expect = 0.067, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSD--RRCMLSGSPDQV 102
++ + VP G+VIGKGG+ IK++ ++GARV+ RE P+D + ++ G+P Q+
Sbjct: 381 DIFYMHVPANKTGLVIGKGGETIKQINMDSGARVEL--SRETAPNDWEKVFVIRGTPYQI 438
Query: 103 QEA 105
A
Sbjct: 439 NHA 441
>gi|148679985|gb|EDL11932.1| far upstream element (FUSE) binding protein 1, isoform CRA_a [Mus
musculus]
Length = 426
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 57/96 (59%), Gaps = 11/96 (11%)
Query: 24 GNMREF-NENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ 82
G RE NE G GG E I V +P+ AVG+VIG+ G+MIKK+QN+ G R+QF
Sbjct: 286 GGFREVRNEYGSRIGG-----NEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQF-- 338
Query: 83 MREDDPS--DRRCMLSGSPDQVQEARARIEELIDSV 116
+ DD + DR ++G PD+ Q A I +L+ SV
Sbjct: 339 -KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSV 373
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R CML+G+P+ VQ A+ ++
Sbjct: 134 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP-ERSCMLTGTPESVQSAKRLLD 192
Query: 111 ELID 114
++++
Sbjct: 193 QIVE 196
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 13/87 (14%)
Query: 31 ENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP-- 88
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q D P
Sbjct: 205 HHGDGPGNA------VQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQ---DGPQN 255
Query: 89 --SDRRCMLSGSPDQVQEARARIEELI 113
+D+ ++G P +VQ+A+ + ELI
Sbjct: 256 TGADKPLRITGDPYKVQQAKEMVLELI 282
>gi|387015918|gb|AFJ50078.1| Far upstream element-binding protein 1-like [Crotalus adamanteus]
Length = 682
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 56/96 (58%), Gaps = 11/96 (11%)
Query: 24 GNMREF-NENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ 82
G RE NE G GG E + V +P+ AVG+VIG+ G+MIKK+QN+ G R+QF
Sbjct: 278 GGFREVRNEYGSRIGGN-----EGLDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQF-- 330
Query: 83 MREDD--PSDRRCMLSGSPDQVQEARARIEELIDSV 116
+ DD DR ++G PD+ Q A I +L+ SV
Sbjct: 331 -KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSV 365
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 8/97 (8%)
Query: 18 RNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGAR 77
+NND+FGN R M E + VP VG +IG+GG+ I ++Q E+G +
Sbjct: 100 QNNDSFGNQLPPMHQQQ-RPVMTE------EYKVPDGMVGFIIGRGGEQISRIQQESGCK 152
Query: 78 VQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
+Q P +R CML+G+P+ VQ A+ ++++++
Sbjct: 153 IQIAPDSGGLP-ERSCMLTGTPESVQSAKRLLDQIVE 188
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 13/87 (14%)
Query: 31 ENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP-- 88
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q D P
Sbjct: 197 HHGDGPGNA------VQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQ---DGPQN 247
Query: 89 --SDRRCMLSGSPDQVQEARARIEELI 113
+D+ ++G P +VQ+A+ + +LI
Sbjct: 248 TGADKPLRITGDPYKVQQAKEMVLDLI 274
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCM 94
GG+ E + VP G++IGKGG+ IK + ++GAR++ + DP+ +
Sbjct: 393 GGLQEFNF-----IVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFT 447
Query: 95 LSGSPDQVQEARARIEELI 113
+ G+P Q+ AR IEE I
Sbjct: 448 IRGTPQQIDYARQLIEEKI 466
>gi|149026247|gb|EDL82490.1| far upstream element (FUSE) binding protein 1, isoform CRA_b
[Rattus norvegicus]
gi|149026248|gb|EDL82491.1| far upstream element (FUSE) binding protein 1, isoform CRA_b
[Rattus norvegicus]
Length = 395
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 57/96 (59%), Gaps = 11/96 (11%)
Query: 24 GNMREF-NENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ 82
G RE NE G GG E I V +P+ AVG+VIG+ G+MIKK+QN+ G R+QF
Sbjct: 254 GGFREVRNEYGSRIGG-----NEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQF-- 306
Query: 83 MREDDPS--DRRCMLSGSPDQVQEARARIEELIDSV 116
+ DD + DR ++G PD+ Q A I +L+ SV
Sbjct: 307 -KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSV 341
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R CML+G+P+ VQ A+ ++
Sbjct: 102 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP-ERSCMLTGTPESVQSAKRLLD 160
Query: 111 ELID 114
++++
Sbjct: 161 QIVE 164
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 13/87 (14%)
Query: 31 ENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP-- 88
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q D P
Sbjct: 173 HHGDGPGNA------VQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQ---DGPQN 223
Query: 89 --SDRRCMLSGSPDQVQEARARIEELI 113
+D+ ++G P +VQ+A+ + ELI
Sbjct: 224 TGADKPLRITGDPYKVQQAKEMVLELI 250
>gi|327276689|ref|XP_003223100.1| PREDICTED: far upstream element-binding protein 1-like [Anolis
carolinensis]
Length = 660
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 56/96 (58%), Gaps = 11/96 (11%)
Query: 24 GNMREF-NENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ 82
G RE NE G GG E + V +P+ AVG+VIG+ G+MIKK+QN+ G R+QF
Sbjct: 257 GGFREVRNEYGSRIGGN-----EGLDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQF-- 309
Query: 83 MREDD--PSDRRCMLSGSPDQVQEARARIEELIDSV 116
+ DD DR ++G PD+ Q A I +L+ SV
Sbjct: 310 -KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSV 344
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 56/97 (57%), Gaps = 10/97 (10%)
Query: 19 NNDNFGN-MREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGAR 77
NND+FGN M ++ R M E + VP VG +IG+GG+ I ++Q E+G +
Sbjct: 80 NNDSFGNQMPPMHQQQ--RSVMTE------EYKVPDGMVGFIIGRGGEQISRIQQESGCK 131
Query: 78 VQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
+Q P +R CML+G+P+ VQ A+ ++++++
Sbjct: 132 IQIAPDSGGMP-ERSCMLTGTPESVQSAKRLLDQIVE 167
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 13/87 (14%)
Query: 31 ENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP-- 88
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q D P
Sbjct: 176 HHGDGPGNA------VQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQ---DGPQN 226
Query: 89 --SDRRCMLSGSPDQVQEARARIEELI 113
+D+ ++G P +VQ+A+ + +LI
Sbjct: 227 TGADKPLRITGDPYKVQQAKEMVLDLI 253
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCM 94
GG+ E + VP G++IGKGG+ IK + ++GAR++ + DP+ +
Sbjct: 372 GGLQEFNF-----IVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFT 426
Query: 95 LSGSPDQVQEARARIEELI 113
+ G+P Q+ AR IEE I
Sbjct: 427 IRGTPQQIDYARQLIEEKI 445
>gi|390335395|ref|XP_003724137.1| PREDICTED: far upstream element-binding protein 3-like isoform 3
[Strongylocentrotus purpuratus]
Length = 689
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 56/96 (58%), Gaps = 12/96 (12%)
Query: 18 RNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGAR 77
+NND R +N RGG + V VPK AVG+VIG+GGDMIK++Q +T AR
Sbjct: 290 KNND-----RSSGDNFYSRGGPHK------DVIVPKHAVGMVIGRGGDMIKRIQEQTKAR 338
Query: 78 VQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELI 113
VQF D P +R +++GS + V A + + +L+
Sbjct: 339 VQFKPGDRDAP-ERVALITGSAESVSMAESMVNDLV 373
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 50/86 (58%), Gaps = 8/86 (9%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP----SDRRCMLSGSPDQ 101
+ + +P VG+VIGKGG+ IK+LQ + G R+ +Q + P D+ +SG +
Sbjct: 218 TVDMLIPATKVGLVIGKGGETIKQLQEQAGVRMVMIQ---EGPVATGMDKPLRISGDSQK 274
Query: 102 VQEARARIEELIDSVM-VEQFSGANF 126
++EA+ + E++++ ++ SG NF
Sbjct: 275 IEEAKRLVSEVMENAKNNDRSSGDNF 300
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS-DRRCMLSGSPDQVQEARARI 109
VP VG++IG+ G I LQ+E+G +Q E+ S DR+ L+G+P+ V A++ I
Sbjct: 144 VPNKMVGLIIGRQGQQISSLQSESGCNIQIAP--ENGISGDRQVTLTGTPEAVMHAKSLI 201
Query: 110 EELID 114
++++
Sbjct: 202 LDIVN 206
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP G+VIG+GG+ I+ + ++ A V+ + + P + ++SG P+Q+ AR+ I+
Sbjct: 446 VPAGKCGLVIGRGGENIRAIMQQSRAHVE-ISHGQHPPGQKIFLISGDPEQIDYARSLID 504
Query: 111 ELID 114
E ++
Sbjct: 505 EKVN 508
>gi|410033139|ref|XP_003949493.1| PREDICTED: far upstream element-binding protein 1 [Pan troglodytes]
gi|426330100|ref|XP_004026062.1| PREDICTED: far upstream element-binding protein 1 isoform 3
[Gorilla gorilla gorilla]
Length = 655
Score = 62.8 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 43/112 (38%), Positives = 64/112 (57%), Gaps = 12/112 (10%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ++ + R+ F +R NE G GG E I V +P+ AVG+VIG+ G+M
Sbjct: 245 QQAKEMVLELIRDQGGFREVR--NEYGSRIGGN-----EGIDVPIPRFAVGIVIGRNGEM 297
Query: 67 IKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+QN+ G R+QF + DD + +R ++G PD+ Q A I +L+ SV
Sbjct: 298 IKKIQNDAGVRIQF---KPDDGTTPERIAQITGPPDRCQHAAEIITDLLRSV 346
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 16 IGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETG 75
+ ND+FG R M E + VP VG +IG+GG+ I ++Q E+G
Sbjct: 78 VAPQNDSFGTQLPPMHQQQSRSVMTE------EYKVPDGMVGFIIGRGGEQISRIQQESG 131
Query: 76 ARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
++Q P +R CML+G+P+ VQ A+ ++++++
Sbjct: 132 CKIQIAPDSGGLP-ERSCMLTGTPESVQSAKRLLDQIVE 169
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 7/83 (8%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSD 90
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q ++ +D
Sbjct: 179 HGDGPGN------AVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 232
Query: 91 RRCMLSGSPDQVQEARARIEELI 113
+ ++G P +VQ+A+ + ELI
Sbjct: 233 KPLRITGDPYKVQQAKEMVLELI 255
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
VP G++IGKGG+ IK + ++GAR++ + DP+ + + G+P Q+ AR
Sbjct: 383 VPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQL 442
Query: 109 IEELI 113
IEE I
Sbjct: 443 IEEKI 447
>gi|390335391|ref|XP_003724135.1| PREDICTED: far upstream element-binding protein 3-like isoform 1
[Strongylocentrotus purpuratus]
Length = 695
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 56/96 (58%), Gaps = 12/96 (12%)
Query: 18 RNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGAR 77
+NND R +N RGG + V VPK AVG+VIG+GGDMIK++Q +T AR
Sbjct: 276 KNND-----RSSGDNFYSRGGPHK------DVIVPKHAVGMVIGRGGDMIKRIQEQTKAR 324
Query: 78 VQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELI 113
VQF D P +R +++GS + V A + + +L+
Sbjct: 325 VQFKPGDRDAP-ERVALITGSAESVSMAESMVNDLV 359
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 50/86 (58%), Gaps = 8/86 (9%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP----SDRRCMLSGSPDQ 101
+ + +P VG+VIGKGG+ IK+LQ + G R+ +Q + P D+ +SG +
Sbjct: 204 TVDMLIPATKVGLVIGKGGETIKQLQEQAGVRMVMIQ---EGPVATGMDKPLRISGDSQK 260
Query: 102 VQEARARIEELIDSVM-VEQFSGANF 126
++EA+ + E++++ ++ SG NF
Sbjct: 261 IEEAKRLVSEVMENAKNNDRSSGDNF 286
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS-DRRCMLSGSPDQVQEARARI 109
VP VG++IG+ G I LQ+E+G +Q E+ S DR+ L+G+P+ V A++ I
Sbjct: 130 VPNKMVGLIIGRQGQQISSLQSESGCNIQIA--PENGISGDRQVTLTGTPEAVMHAKSLI 187
Query: 110 EELID 114
++++
Sbjct: 188 LDIVN 192
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP G+VIG+GG+ I+ + ++ A V+ + + P + ++SG P+Q+ AR+ I+
Sbjct: 432 VPAGKCGLVIGRGGENIRAIMQQSRAHVE-ISHGQHPPGQKIFLISGDPEQIDYARSLID 490
Query: 111 ELID 114
E ++
Sbjct: 491 EKVN 494
>gi|390335393|ref|XP_003724136.1| PREDICTED: far upstream element-binding protein 3-like isoform 2
[Strongylocentrotus purpuratus]
Length = 696
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 56/96 (58%), Gaps = 12/96 (12%)
Query: 18 RNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGAR 77
+NND R +N RGG + V VPK AVG+VIG+GGDMIK++Q +T AR
Sbjct: 276 KNND-----RSSGDNFYSRGGPHK------DVIVPKHAVGMVIGRGGDMIKRIQEQTKAR 324
Query: 78 VQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELI 113
VQF D P +R +++GS + V A + + +L+
Sbjct: 325 VQFKPGDRDAP-ERVALITGSAESVSMAESMVNDLV 359
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 50/86 (58%), Gaps = 8/86 (9%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS----DRRCMLSGSPDQ 101
+ + +P VG+VIGKGG+ IK+LQ + G R+ +Q + P D+ +SG +
Sbjct: 204 TVDMLIPATKVGLVIGKGGETIKQLQEQAGVRMVMIQ---EGPVATGMDKPLRISGDSQK 260
Query: 102 VQEARARIEELIDSVM-VEQFSGANF 126
++EA+ + E++++ ++ SG NF
Sbjct: 261 IEEAKRLVSEVMENAKNNDRSSGDNF 286
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 6/79 (7%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS-DRRCML 95
GG+ + E++ VP VG++IG+ G I LQ+E+G +Q E+ S DR+ L
Sbjct: 119 GGLGSINDELL---VPDKVVGLIIGRQGQQISSLQSESGCNIQIA--PENGISGDRQVTL 173
Query: 96 SGSPDQVQEARARIEELID 114
+G+P+ V A++ I ++++
Sbjct: 174 TGTPEAVMHAKSLILDIVN 192
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP G+VIG+GG+ I+ + ++ A V+ + + P + ++SG P+Q+ AR+ I+
Sbjct: 432 VPAGKCGLVIGRGGENIRAIMQQSRAHVE-ISHGQHPPGQKIFLISGDPEQIDYARSLID 490
Query: 111 ELID 114
E ++
Sbjct: 491 EKVN 494
>gi|119626763|gb|EAX06358.1| far upstream element (FUSE) binding protein 1, isoform CRA_c [Homo
sapiens]
Length = 656
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 43/112 (38%), Positives = 64/112 (57%), Gaps = 12/112 (10%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ++ + R+ F +R NE G GG E I V +P+ AVG+VIG+ G+M
Sbjct: 245 QQAKEMVLELIRDQGGFREVR--NEYGSRIGGN-----EGIDVPIPRFAVGIVIGRNGEM 297
Query: 67 IKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+QN+ G R+QF + DD + +R ++G PD+ Q A I +L+ SV
Sbjct: 298 IKKIQNDAGVRIQF---KPDDGTTPERIAQITGPPDRCQHAAEIITDLLRSV 346
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 16 IGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETG 75
+ ND+FG R M E + VP VG +IG+GG+ I ++Q E+G
Sbjct: 78 VAPQNDSFGTQLPPMHQQQSRSVMTE------EYKVPDGMVGFIIGRGGEQISRIQQESG 131
Query: 76 ARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
++Q P +R CML+G+P+ VQ A+ ++++++
Sbjct: 132 CKIQIAPDSGGLP-ERSCMLTGTPESVQSAKRLLDQIVE 169
Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 7/83 (8%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSD 90
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q ++ +D
Sbjct: 179 HGDGPGN------AVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 232
Query: 91 RRCMLSGSPDQVQEARARIEELI 113
+ ++G P +VQ+A+ + ELI
Sbjct: 233 KPLRITGDPYKVQQAKEMVLELI 255
Score = 42.0 bits (97), Expect = 0.080, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 51 VPKAAVGVVIGKG-GDMIKKLQNETGARVQFVQMR--EDDPSDRRCMLSGSPDQVQEARA 107
VP G++IGKG G+ IK + ++GAR++ + DP+ + + G+P Q+ AR
Sbjct: 383 VPTGKTGLIIGKGRGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQ 442
Query: 108 RIEELI 113
IEE I
Sbjct: 443 LIEEKI 448
>gi|62088312|dbj|BAD92603.1| far upstream element-binding protein variant [Homo sapiens]
Length = 493
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 43/112 (38%), Positives = 64/112 (57%), Gaps = 12/112 (10%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ++ + R+ F +R NE G GG E I V +P+ AVG+VIG+ G+M
Sbjct: 95 QQAKEMVLELIRDQGGFREVR--NEYGSRIGGN-----EGIDVPIPRFAVGIVIGRNGEM 147
Query: 67 IKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+QN+ G R+QF + DD + +R ++G PD+ Q A I +L+ SV
Sbjct: 148 IKKIQNDAGVRIQF---KPDDGTTPERIAQITGPPDRCQHAAEIITDLLRSV 196
Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 7/83 (8%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSD 90
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q ++ +D
Sbjct: 29 HGDGPGN------AVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 82
Query: 91 RRCMLSGSPDQVQEARARIEELI 113
+ ++G P +VQ+A+ + ELI
Sbjct: 83 KPLRITGDPYKVQQAKEMVLELI 105
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
VP G++IGKGG+ IK + ++GAR++ + DP+ + + G+P Q+ AR
Sbjct: 233 VPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQL 292
Query: 109 IEELI 113
IEE I
Sbjct: 293 IEEKI 297
>gi|297278996|ref|XP_001103908.2| PREDICTED: far upstream element-binding protein 1 [Macaca mulatta]
gi|402855025|ref|XP_003892147.1| PREDICTED: far upstream element-binding protein 1 [Papio anubis]
gi|16878077|gb|AAH17247.1| FUBP1 protein [Homo sapiens]
gi|123998487|gb|ABM86845.1| far upstream element (FUSE) binding protein 1 [synthetic construct]
gi|157929090|gb|ABW03830.1| far upstream element (FUSE) binding protein 1 [synthetic construct]
Length = 653
Score = 62.4 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 43/112 (38%), Positives = 64/112 (57%), Gaps = 12/112 (10%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ++ + R+ F +R NE G GG E I V +P+ AVG+VIG+ G+M
Sbjct: 244 QQAKEMVLELIRDQGGFREVR--NEYGSRIGGN-----EGIDVPIPRFAVGIVIGRNGEM 296
Query: 67 IKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+QN+ G R+QF + DD + +R ++G PD+ Q A I +L+ SV
Sbjct: 297 IKKIQNDAGVRIQF---KPDDGTTPERIAQITGPPDRCQHAAEIITDLLRSV 345
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R CML+G+P+ VQ A+ ++
Sbjct: 106 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP-ERSCMLTGTPESVQSAKRLLD 164
Query: 111 ELID 114
++++
Sbjct: 165 QIVE 168
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 7/83 (8%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSD 90
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q ++ +D
Sbjct: 178 HGDGPGN------AVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 231
Query: 91 RRCMLSGSPDQVQEARARIEELI 113
+ ++G P +VQ+A+ + ELI
Sbjct: 232 KPLRITGDPYKVQQAKEMVLELI 254
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
VP G++IGKGG+ IK + ++GAR++ + DP+ + + G+P Q+ AR
Sbjct: 382 VPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQL 441
Query: 109 IEELI 113
IEE I
Sbjct: 442 IEEKI 446
>gi|355558120|gb|EHH14900.1| hypothetical protein EGK_00902 [Macaca mulatta]
gi|355761156|gb|EHH61761.1| hypothetical protein EGM_19848 [Macaca fascicularis]
Length = 654
Score = 62.4 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 43/112 (38%), Positives = 64/112 (57%), Gaps = 12/112 (10%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ++ + R+ F +R NE G GG E I V +P+ AVG+VIG+ G+M
Sbjct: 245 QQAKEMVLELIRDQGGFREVR--NEYGSRIGGN-----EGIDVPIPRFAVGIVIGRNGEM 297
Query: 67 IKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+QN+ G R+QF + DD + +R ++G PD+ Q A I +L+ SV
Sbjct: 298 IKKIQNDAGVRIQF---KPDDGTTPERIAQITGPPDRCQHAAEIITDLLRSV 346
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 16 IGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETG 75
+ ND+FG R M E + VP VG +IG+GG+ I ++Q E+G
Sbjct: 78 VAPQNDSFGTQLPPMHQQQSRSVMTE------EYKVPDGMVGFIIGRGGEQISRIQQESG 131
Query: 76 ARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
++Q P +R CML+G+P+ VQ A+ ++++++
Sbjct: 132 CKIQIAPDSGGLP-ERSCMLTGTPESVQSAKRLLDQIVE 169
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 7/83 (8%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSD 90
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q ++ +D
Sbjct: 179 HGDGPGN------AVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 232
Query: 91 RRCMLSGSPDQVQEARARIEELI 113
+ ++G P +VQ+A+ + ELI
Sbjct: 233 KPLRITGDPYKVQQAKEMVLELI 255
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
VP G++IGKGG+ IK + ++GAR++ + DP+ + + G+P Q+ AR
Sbjct: 383 VPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQL 442
Query: 109 IEELI 113
IEE I
Sbjct: 443 IEEKI 447
>gi|395730346|ref|XP_002810731.2| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 1 [Pongo abelii]
Length = 667
Score = 62.4 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 43/112 (38%), Positives = 64/112 (57%), Gaps = 12/112 (10%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ++ + R+ F +R NE G GG E I V +P+ AVG+VIG+ G+M
Sbjct: 244 QQAKEMVLELIRDQGGFREVR--NEYGSRIGGN-----EGIDVPIPRFAVGIVIGRNGEM 296
Query: 67 IKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+QN+ G R+QF + DD + +R ++G PD+ Q A I +L+ SV
Sbjct: 297 IKKIQNDAGVRIQF---KPDDGTTPERIAQITGPPDRCQHAAEIITDLLRSV 345
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R CML+G+P+ VQ A+ ++
Sbjct: 106 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP-ERSCMLTGTPESVQSAKRLLD 164
Query: 111 ELID 114
++++
Sbjct: 165 QIVE 168
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 7/83 (8%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSD 90
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q ++ +D
Sbjct: 178 HGDGPGN------AVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 231
Query: 91 RRCMLSGSPDQVQEARARIEELI 113
+ ++G P +VQ+A+ + ELI
Sbjct: 232 KPLRITGDPYKVQQAKEMVLELI 254
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
VP G++IGKGG+ IK + ++GAR++ + DP+ + + G+P Q+ AR
Sbjct: 382 VPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQL 441
Query: 109 IEELI 113
IEE I
Sbjct: 442 IEEKI 446
>gi|119626762|gb|EAX06357.1| far upstream element (FUSE) binding protein 1, isoform CRA_b [Homo
sapiens]
Length = 654
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 43/112 (38%), Positives = 64/112 (57%), Gaps = 12/112 (10%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ++ + R+ F +R NE G GG E I V +P+ AVG+VIG+ G+M
Sbjct: 244 QQAKEMVLELIRDQGGFREVR--NEYGSRIGGN-----EGIDVPIPRFAVGIVIGRNGEM 296
Query: 67 IKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+QN+ G R+QF + DD + +R ++G PD+ Q A I +L+ SV
Sbjct: 297 IKKIQNDAGVRIQF---KPDDGTTPERIAQITGPPDRCQHAAEIITDLLRSV 345
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R CML+G+P+ VQ A+ ++
Sbjct: 106 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP-ERSCMLTGTPESVQSAKRLLD 164
Query: 111 ELID 114
++++
Sbjct: 165 QIVE 168
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 7/83 (8%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSD 90
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q ++ +D
Sbjct: 178 HGDGPGN------AVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 231
Query: 91 RRCMLSGSPDQVQEARARIEELI 113
+ ++G P +VQ+A+ + ELI
Sbjct: 232 KPLRITGDPYKVQQAKEMVLELI 254
Score = 42.0 bits (97), Expect = 0.092, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 51 VPKAAVGVVIGKG-GDMIKKLQNETGARVQFVQMR--EDDPSDRRCMLSGSPDQVQEARA 107
VP G++IGKG G+ IK + ++GAR++ + DP+ + + G+P Q+ AR
Sbjct: 382 VPTGKTGLIIGKGRGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQ 441
Query: 108 RIEELI 113
IEE I
Sbjct: 442 LIEEKI 447
>gi|332809276|ref|XP_003308215.1| PREDICTED: far upstream element-binding protein 1 [Pan troglodytes]
gi|397472596|ref|XP_003807826.1| PREDICTED: far upstream element-binding protein 1 isoform 2 [Pan
paniscus]
gi|426330098|ref|XP_004026061.1| PREDICTED: far upstream element-binding protein 1 isoform 2
[Gorilla gorilla gorilla]
gi|194390162|dbj|BAG61843.1| unnamed protein product [Homo sapiens]
Length = 665
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 43/112 (38%), Positives = 64/112 (57%), Gaps = 12/112 (10%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ++ + R+ F +R NE G GG E I V +P+ AVG+VIG+ G+M
Sbjct: 266 QQAKEMVLELIRDQGGFREVR--NEYGSRIGGN-----EGIDVPIPRFAVGIVIGRNGEM 318
Query: 67 IKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+QN+ G R+QF + DD + +R ++G PD+ Q A I +L+ SV
Sbjct: 319 IKKIQNDAGVRIQF---KPDDGTTPERIAQITGPPDRCQHAAEIITDLLRSV 367
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 16 IGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETG 75
+ ND+FG R M E + VP VG +IG+GG+ I ++Q E+G
Sbjct: 99 VAPQNDSFGTQLPPMHQQQSRSVMTE------EYKVPDGMVGFIIGRGGEQISRIQQESG 152
Query: 76 ARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
++Q P +R CML+G+P+ VQ A+ ++++++
Sbjct: 153 CKIQIAPDSGGLP-ERSCMLTGTPESVQSAKRLLDQIVE 190
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 7/83 (8%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSD 90
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q ++ +D
Sbjct: 200 HGDGPGN------AVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 253
Query: 91 RRCMLSGSPDQVQEARARIEELI 113
+ ++G P +VQ+A+ + ELI
Sbjct: 254 KPLRITGDPYKVQQAKEMVLELI 276
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
VP G++IGKGG+ IK + ++GAR++ + DP+ + + G+P Q+ AR
Sbjct: 404 VPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQL 463
Query: 109 IEELI 113
IEE I
Sbjct: 464 IEEKI 468
>gi|168026870|ref|XP_001765954.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682860|gb|EDQ69275.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 770
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 35/82 (42%), Positives = 54/82 (65%), Gaps = 6/82 (7%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQV 102
E ++ VP + VG+VIGKGG+ IK LQ+++GAR+Q + E DP S R+ L G+P+Q+
Sbjct: 308 ESRKIEVPNSKVGLVIGKGGETIKYLQHQSGARIQVARDGESDPRSSTRQVELMGTPEQI 367
Query: 103 QEARARIEELIDSVMVEQFSGA 124
+R E+L+ V+ E +GA
Sbjct: 368 ----SRAEQLVKDVIAEASTGA 385
Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQV 102
E +Q+ VP VG++IG+GG+ IK LQ+ +GAR+Q E +P ++R L G
Sbjct: 401 EQVQIKVPNNKVGLIIGRGGETIKSLQSRSGARIQVQNDSETEPGATERVVTLIGIKKVT 460
Query: 103 QEARARIEELIDSV 116
A I+E+ID +
Sbjct: 461 DMAYELIKEVIDEL 474
>gi|410922393|ref|XP_003974667.1| PREDICTED: far upstream element-binding protein 3-like [Takifugu
rubripes]
Length = 559
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 46/72 (63%), Gaps = 5/72 (6%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
I V VP+ AVG+VIG+ G+MIKK+QN+ G R+QF + DD +R M+ G PD+ Q
Sbjct: 259 IDVPVPRFAVGIVIGRNGEMIKKIQNDAGVRIQF---KADDGISPERVAMVMGQPDRCQH 315
Query: 105 ARARIEELIDSV 116
A I ELI +
Sbjct: 316 AVHLINELIQTA 327
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 50/86 (58%), Gaps = 12/86 (13%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--- 88
+GDG GG V ++ +P + VG+VIG+GGD IK+LQ G ++ +Q D P
Sbjct: 159 HGDGEGGA-----SVQEMLIPASKVGLVIGRGGDTIKQLQERAGVKMMMIQ---DGPMPT 210
Query: 89 -SDRRCMLSGSPDQVQEARARIEELI 113
+D+ +SG P +VQ AR + E+I
Sbjct: 211 GADKPLRISGDPYKVQAARELVLEVI 236
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q + +R C L+G+P+ ++ A+ +
Sbjct: 88 VPDRMVGFIIGRGGEQINRIQLESGCKIQ-IAADSGGLMERPCSLTGTPESIEHAKRLLV 146
Query: 111 ELID 114
+++D
Sbjct: 147 QIVD 150
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 43/97 (44%), Gaps = 11/97 (11%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS----DRR 92
G + EVT+ + G+VIGKGG+ IK + ++GA V+ R PS R
Sbjct: 354 GPLQEVTY-----TISADKCGLVIGKGGETIKSINQQSGAHVEL--QRNPPPSTDHNTRV 406
Query: 93 CMLSGSPDQVQEARARIEELIDSVMVEQFSGANFDKL 129
+ GS Q+ AR I++ I + G F
Sbjct: 407 FTIRGSAQQMDVARQLIDDKIGGSGIMSNGGFGFSPF 443
>gi|444517768|gb|ELV11782.1| Far upstream element-binding protein 3 [Tupaia chinensis]
Length = 463
Score = 62.0 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
+QV VP+ AVG+VIG+ G+MIKK+QN+ G R+QF + DD +R + G PD+ Q
Sbjct: 158 VQVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQF---KPDDGISPERAAQVMGPPDRCQH 214
Query: 105 ARARIEELI 113
A I ELI
Sbjct: 215 AAHVISELI 223
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 55/105 (52%), Gaps = 14/105 (13%)
Query: 8 QSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMI 67
R+ ++ +G+ D N F+ + DG + E+ +P + VG+VIGKGG+ I
Sbjct: 70 HQRQAKRLLGQIVDRCRNGPGFHNDMDGNSTVQELL-------IPASKVGLVIGKGGETI 122
Query: 68 KKLQNETGARVQFVQMREDDP----SDRRCMLSGSPDQVQEARAR 108
K+LQ TG ++ +Q D P +D+ ++G P +VQ + R
Sbjct: 123 KQLQERTGVKMVMIQ---DGPLPTGADKPLRITGDPFKVQVSVPR 164
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCM 94
GG E+T+ V P G+VIGKGG+ IK + ++GA V+ + DP R
Sbjct: 254 GGFQEITYTV-----PADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPGLRIFT 308
Query: 95 LSGSPDQVQEARARIEELI 113
+ G P Q++ AR I+E +
Sbjct: 309 IRGIPQQIEVARHLIDEKV 327
>gi|159162537|pdb|1J4W|A Chain A, Complex Of The Kh3 And Kh4 Domains Of Fbp With A
Single_stranded 29mer Dna Oligonucleotide From The Fuse
Element Of The C-Myc Oncogene
Length = 174
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 48/74 (64%), Gaps = 5/74 (6%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQV 102
+I V +P+ AVG+VIG+ G+MIKK+QN+ G R+QF + DD +R ++G PD+
Sbjct: 3 HMIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQF---KPDDGTTPERIAQITGPPDRA 59
Query: 103 QEARARIEELIDSV 116
Q A I +L+ SV
Sbjct: 60 QHAAEIITDLLRSV 73
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCM 94
GG+ E + VP G++IGKGG+ IK + ++GAR++ + DP+ +
Sbjct: 101 GGLQEFNF-----IVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFT 155
Query: 95 LSGSPDQVQEARARIEELI 113
+ G+P Q+ AR IEE I
Sbjct: 156 IRGTPQQIDYARQLIEEKI 174
>gi|383422519|gb|AFH34473.1| far upstream element-binding protein 1 [Macaca mulatta]
Length = 643
Score = 62.0 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 43/112 (38%), Positives = 64/112 (57%), Gaps = 12/112 (10%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ++ + R+ F +R NE G GG E I V +P+ AVG+VIG+ G+M
Sbjct: 244 QQAKEMVLELIRDQGGFREVR--NEYGSRIGGN-----EGIDVPIPRFAVGIVIGRNGEM 296
Query: 67 IKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+QN+ G R+QF + DD + +R ++G PD+ Q A I +L+ SV
Sbjct: 297 IKKIQNDAGVRIQF---KPDDGTTPERIAQITGPPDRCQHAAEIITDLLRSV 345
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R CML+G+P+ VQ A+ ++
Sbjct: 106 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP-ERSCMLTGTPESVQSAKRLLD 164
Query: 111 ELID 114
++++
Sbjct: 165 QIVE 168
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 7/83 (8%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSD 90
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q ++ +D
Sbjct: 178 HGDGPGN------AVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 231
Query: 91 RRCMLSGSPDQVQEARARIEELI 113
+ ++G P +VQ+A+ + ELI
Sbjct: 232 KPLRITGDPYKVQQAKEMVLELI 254
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
VP G++IGKGG+ IK + ++GAR++ + DP+ + + G+P Q+ AR
Sbjct: 382 VPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQL 441
Query: 109 IEELI 113
IEE I
Sbjct: 442 IEEKI 446
>gi|17402900|ref|NP_003893.2| far upstream element-binding protein 1 [Homo sapiens]
gi|332809274|ref|XP_513511.3| PREDICTED: far upstream element-binding protein 1 isoform 2 [Pan
troglodytes]
gi|397472594|ref|XP_003807825.1| PREDICTED: far upstream element-binding protein 1 isoform 1 [Pan
paniscus]
gi|426330096|ref|XP_004026060.1| PREDICTED: far upstream element-binding protein 1 isoform 1
[Gorilla gorilla gorilla]
gi|116241370|sp|Q96AE4.3|FUBP1_HUMAN RecName: Full=Far upstream element-binding protein 1; Short=FBP;
Short=FUSE-binding protein 1; AltName: Full=DNA helicase
V; Short=hDH V
gi|17158056|gb|AAA17976.2|AAA17976 FUSE binding protein [Homo sapiens]
gi|119626761|gb|EAX06356.1| far upstream element (FUSE) binding protein 1, isoform CRA_a [Homo
sapiens]
gi|380817628|gb|AFE80688.1| far upstream element-binding protein 1 [Macaca mulatta]
gi|410225756|gb|JAA10097.1| far upstream element (FUSE) binding protein 1 [Pan troglodytes]
gi|410258414|gb|JAA17174.1| far upstream element (FUSE) binding protein 1 [Pan troglodytes]
gi|410301636|gb|JAA29418.1| far upstream element (FUSE) binding protein 1 [Pan troglodytes]
gi|410331317|gb|JAA34605.1| far upstream element (FUSE) binding protein 1 [Pan troglodytes]
Length = 644
Score = 62.0 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 43/112 (38%), Positives = 64/112 (57%), Gaps = 12/112 (10%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ++ + R+ F +R NE G GG E I V +P+ AVG+VIG+ G+M
Sbjct: 245 QQAKEMVLELIRDQGGFREVR--NEYGSRIGGN-----EGIDVPIPRFAVGIVIGRNGEM 297
Query: 67 IKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+QN+ G R+QF + DD + +R ++G PD+ Q A I +L+ SV
Sbjct: 298 IKKIQNDAGVRIQF---KPDDGTTPERIAQITGPPDRCQHAAEIITDLLRSV 346
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 16 IGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETG 75
+ ND+FG R M E + VP VG +IG+GG+ I ++Q E+G
Sbjct: 78 VAPQNDSFGTQLPPMHQQQSRSVMTE------EYKVPDGMVGFIIGRGGEQISRIQQESG 131
Query: 76 ARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
++Q P +R CML+G+P+ VQ A+ ++++++
Sbjct: 132 CKIQIAPDSGGLP-ERSCMLTGTPESVQSAKRLLDQIVE 169
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 7/83 (8%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSD 90
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q ++ +D
Sbjct: 179 HGDGPGN------AVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 232
Query: 91 RRCMLSGSPDQVQEARARIEELI 113
+ ++G P +VQ+A+ + ELI
Sbjct: 233 KPLRITGDPYKVQQAKEMVLELI 255
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
VP G++IGKGG+ IK + ++GAR++ + DP+ + + G+P Q+ AR
Sbjct: 383 VPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQL 442
Query: 109 IEELI 113
IEE I
Sbjct: 443 IEEKI 447
>gi|90076756|dbj|BAE88058.1| unnamed protein product [Macaca fascicularis]
Length = 536
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 56/96 (58%), Gaps = 11/96 (11%)
Query: 24 GNMREF-NENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ 82
G RE NE G GG E I V +P+ AVG+VIG+ G+MIKK+QN+ G R+QF
Sbjct: 151 GGFREVRNEYGSRIGGN-----EGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQF-- 203
Query: 83 MREDD--PSDRRCMLSGSPDQVQEARARIEELIDSV 116
+ DD +R ++G PD+ Q A I +L+ SV
Sbjct: 204 -KPDDGTTPERIAQITGPPDRCQHAAEIITDLLRSV 238
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 13/87 (14%)
Query: 31 ENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP-- 88
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q D P
Sbjct: 70 HHGDGPGNA------VQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQ---DGPQN 120
Query: 89 --SDRRCMLSGSPDQVQEARARIEELI 113
+D+ ++G P +VQ+A+ + ELI
Sbjct: 121 TGADKPLRITGDPYKVQQAKEMVLELI 147
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 57 GVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
G +IG+GG+ I ++Q E+G ++Q P +R CML+G+P+ VQ A+ ++++++
Sbjct: 5 GFIIGRGGEQISRIQQESGCKIQIAPDSGGLP-ERSCMLTGTPESVQSAKRLLDQIVE 61
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 50 CVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCMLSGSPDQVQEARA 107
VP G++IGKGG+ IK + ++GAR++ + DP+ + + G+P Q+ AR
Sbjct: 274 IVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQ 333
Query: 108 RIEELI 113
IEE I
Sbjct: 334 LIEEKI 339
>gi|332222252|ref|XP_003260281.1| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 1 [Nomascus leucogenys]
Length = 645
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 56/96 (58%), Gaps = 11/96 (11%)
Query: 24 GNMREF-NENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ 82
G RE NE G GG E I V +P+ AVG+VIG+ G+MIKK+QN+ G R+QF
Sbjct: 260 GGFREVRNEYGSRIGGN-----EGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQF-- 312
Query: 83 MREDD--PSDRRCMLSGSPDQVQEARARIEELIDSV 116
+ DD +R ++G PD+ Q A I +L+ SV
Sbjct: 313 -KPDDGTTPERIAQITGPPDRCQHAAEIITDLLRSV 347
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 16 IGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETG 75
+ ND+FG R M E + VP VG +IG+GG+ I ++Q E+G
Sbjct: 78 VAPQNDSFGTQLPPMHQQQSRSVMTE------EYKVPDGMVGFIIGRGGEQISRIQQESG 131
Query: 76 ARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
++Q P +R CML+G+P+ VQ A+ ++++++
Sbjct: 132 CKIQIAPDSGGLP-ERSCMLTGTPESVQSAKRLLDQIVE 169
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 13/87 (14%)
Query: 31 ENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP-- 88
+GDG G ++ ++ +P + G+VIGKGG+ IK+LQ G ++ +Q D P
Sbjct: 179 HHGDGPGNAFQ------EIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQ---DGPQN 229
Query: 89 --SDRRCMLSGSPDQVQEARARIEELI 113
+D+ ++G P +VQ+A+ + ELI
Sbjct: 230 TGADKPLRITGDPYKVQQAKEMVLELI 256
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCM 94
GG+ E + VP G++IGKGG+ IK + ++GAR++ + DP+ +
Sbjct: 375 GGLQEFNF-----IVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFT 429
Query: 95 LSGSPDQVQEARARIEELI 113
+ G+P Q+ AR IEE I
Sbjct: 430 IRGTPQQIDYARQLIEEKI 448
>gi|426363332|ref|XP_004048795.1| PREDICTED: far upstream element-binding protein 3 [Gorilla gorilla
gorilla]
Length = 572
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
I+V VP+ AVG+VIG+ G+MIKK+QN+ G R+QF + DD +R + G PD+ Q
Sbjct: 256 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQF---KPDDGISPERAAQVMGPPDRCQH 312
Query: 105 ARARIEELI 113
A I ELI
Sbjct: 313 AAHIISELI 321
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R C+L+G+P+ +++A+ +
Sbjct: 84 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIP-ERPCVLTGTPESIEQAKRLLG 142
Query: 111 ELID 114
+++D
Sbjct: 143 QIVD 146
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ--MREDDPSDRRCM 94
GG+ E+T+ VP G+VIGKGG+ IK + ++GA V+ + DP+ RR
Sbjct: 352 GGVQEITY-----TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFT 406
Query: 95 LSGSPDQVQEARARIEELI 113
+ G P Q++ AR I+E +
Sbjct: 407 IRGVPQQIEVARQLIDEKV 425
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 7/86 (8%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--- 88
NG G + + ++ +P + VG+VIG+GG+ IK+LQ TG ++ +Q D P
Sbjct: 150 NGPGFHNDVDSNSTIQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQ---DGPLPT 206
Query: 89 -SDRRCMLSGSPDQVQEARARIEELI 113
+D+ ++G +VQ+AR + E+I
Sbjct: 207 GADKPLRITGDAFKVQQAREMVLEII 232
>gi|100816392|ref|NP_003925.1| far upstream element-binding protein 3 [Homo sapiens]
gi|297685554|ref|XP_002820351.1| PREDICTED: far upstream element-binding protein 3 [Pongo abelii]
gi|37078499|sp|Q96I24.2|FUBP3_HUMAN RecName: Full=Far upstream element-binding protein 3;
Short=FUSE-binding protein 3
gi|119608343|gb|EAW87937.1| hCG31253, isoform CRA_a [Homo sapiens]
gi|119608344|gb|EAW87938.1| hCG31253, isoform CRA_a [Homo sapiens]
gi|187950609|gb|AAI37339.1| Far upstream element (FUSE) binding protein 3 [Homo sapiens]
gi|187951661|gb|AAI37341.1| Far upstream element (FUSE) binding protein 3 [Homo sapiens]
gi|194379238|dbj|BAG58170.1| unnamed protein product [Homo sapiens]
Length = 572
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
I+V VP+ AVG+VIG+ G+MIKK+QN+ G R+QF + DD +R + G PD+ Q
Sbjct: 256 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQF---KPDDGISPERAAQVMGPPDRCQH 312
Query: 105 ARARIEELI 113
A I ELI
Sbjct: 313 AAHIISELI 321
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R C+L+G+P+ +++A+ +
Sbjct: 84 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIP-ERPCVLTGTPESIEQAKRLLG 142
Query: 111 ELID 114
+++D
Sbjct: 143 QIVD 146
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ--MREDDPSDRRCM 94
GG+ E+T+ VP G+VIGKGG+ IK + ++GA V+ + DP+ RR
Sbjct: 352 GGVQEITY-----TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFT 406
Query: 95 LSGSPDQVQEARARIEELI 113
+ G P Q++ AR I+E +
Sbjct: 407 IRGVPQQIEVARQLIDEKV 425
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 7/86 (8%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--- 88
NG G + + ++ +P + VG+VIG+GG+ IK+LQ TG ++ +Q D P
Sbjct: 150 NGPGFHNDIDSNSTIQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQ---DGPLPT 206
Query: 89 -SDRRCMLSGSPDQVQEARARIEELI 113
+D+ ++G +VQ+AR + E+I
Sbjct: 207 GADKPLRITGDAFKVQQAREMVLEII 232
>gi|402896286|ref|XP_003911235.1| PREDICTED: far upstream element-binding protein 3 [Papio anubis]
Length = 572
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
I+V VP+ AVG+VIG+ G+MIKK+QN+ G R+QF + DD +R + G PD+ Q
Sbjct: 256 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQF---KPDDGISPERAAQVMGPPDRCQH 312
Query: 105 ARARIEELI 113
A I ELI
Sbjct: 313 AAHIISELI 321
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R C+L+G+P+ +++A+ +
Sbjct: 84 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIP-ERPCVLTGTPESIEQAKRLLG 142
Query: 111 ELID 114
+++D
Sbjct: 143 QIVD 146
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ--MREDDPSDRRCM 94
GG+ E+T+ VP G+VIGKGG+ IK + ++GA V+ + DP+ RR
Sbjct: 352 GGVQEITY-----TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFT 406
Query: 95 LSGSPDQVQEARARIEELI 113
+ G P Q++ AR I+E +
Sbjct: 407 IRGVPQQIEVARQLIDEKV 425
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 7/86 (8%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--- 88
NG G + + ++ +P + VG+VIG+GG+ IK+LQ TG ++ +Q D P
Sbjct: 150 NGPGFHNDIDSNSTIQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQ---DGPLPT 206
Query: 89 -SDRRCMLSGSPDQVQEARARIEELI 113
+D+ ++G +VQ+AR + E+I
Sbjct: 207 GADKPLRITGDAFKVQQAREMVLEII 232
>gi|332833136|ref|XP_520317.3| PREDICTED: far upstream element-binding protein 3 [Pan troglodytes]
gi|397503629|ref|XP_003822422.1| PREDICTED: far upstream element-binding protein 3 [Pan paniscus]
gi|410219718|gb|JAA07078.1| far upstream element (FUSE) binding protein 3 [Pan troglodytes]
gi|410292988|gb|JAA25094.1| far upstream element (FUSE) binding protein 3 [Pan troglodytes]
gi|410350985|gb|JAA42096.1| far upstream element (FUSE) binding protein 3 [Pan troglodytes]
Length = 572
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
I+V VP+ AVG+VIG+ G+MIKK+QN+ G R+QF + DD +R + G PD+ Q
Sbjct: 256 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQF---KPDDGISPERAAQVMGPPDRCQH 312
Query: 105 ARARIEELI 113
A I ELI
Sbjct: 313 AAHIISELI 321
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R C+L+G+P+ +++A+ +
Sbjct: 84 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIP-ERPCVLTGTPESIEQAKRLLG 142
Query: 111 ELID 114
+++D
Sbjct: 143 QIVD 146
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ--MREDDPSDRRCM 94
GG+ E+T+ VP G+VIGKGG+ IK + ++GA V+ + DP+ RR
Sbjct: 352 GGIQEITY-----TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFT 406
Query: 95 LSGSPDQVQEARARIEELI 113
+ G P Q++ AR I+E +
Sbjct: 407 IRGVPQQIEVARQLIDEKV 425
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 7/86 (8%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--- 88
NG G + + ++ +P + VG+VIG+GG+ IK+LQ TG ++ +Q D P
Sbjct: 150 NGPGFHNDIDSNSTIQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQ---DGPLPT 206
Query: 89 -SDRRCMLSGSPDQVQEARARIEELI 113
+D+ ++G +VQ+AR + E+I
Sbjct: 207 GADKPLRITGDAFKVQQAREMVLEII 232
>gi|395844390|ref|XP_003794945.1| PREDICTED: far upstream element-binding protein 3 [Otolemur
garnettii]
Length = 572
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
I+V VP+ AVG+VIG+ G+MIKK+QN+ G R+QF + DD +R + G PD+ Q
Sbjct: 256 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQF---KPDDGISPERAAQVMGPPDRCQH 312
Query: 105 ARARIEELI 113
A I ELI
Sbjct: 313 AAHIISELI 321
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 17/112 (15%)
Query: 6 FQQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGD 65
+Q++R +G+ D N F+ + DG + E+ +P + VG+VIGKGG+
Sbjct: 134 IEQAKRL---LGQIVDRCRNGPSFHNDVDGNSTIQEI-------LIPASKVGLVIGKGGE 183
Query: 66 MIKKLQNETGARVQFVQMREDDP----SDRRCMLSGSPDQVQEARARIEELI 113
IK+LQ TG ++ +Q D P +D+ ++G P +VQ+AR + E+I
Sbjct: 184 TIKQLQERTGVKMVMIQ---DGPLPTGTDKPLRITGDPFKVQQAREMVLEII 232
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R C+L+G+P+ +++A+ +
Sbjct: 84 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIP-ERPCVLTGTPESIEQAKRLLG 142
Query: 111 ELID 114
+++D
Sbjct: 143 QIVD 146
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 15/103 (14%)
Query: 21 DNFGNMREFNENGDGRG--------GMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQN 72
D FG++ G RG G+ E+T+ VP G+VIGKGG+ IK +
Sbjct: 328 DGFGSLAVPRGRGRSRGDWSVGTPGGVQEITY-----TVPADKCGLVIGKGGENIKSINQ 382
Query: 73 ETGARVQFVQ--MREDDPSDRRCMLSGSPDQVQEARARIEELI 113
++GA V+ + DP+ R + G P Q++ AR I+E +
Sbjct: 383 QSGAHVELQRNPPPNTDPNLRIFTIRGIPQQIEVARHLIDEKV 425
>gi|155372155|ref|NP_001094687.1| far upstream element-binding protein 3 [Bos taurus]
gi|151554191|gb|AAI49199.1| FUBP3 protein [Bos taurus]
gi|296482076|tpg|DAA24191.1| TPA: far upstream element (FUSE) binding protein 3 [Bos taurus]
Length = 572
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
I+V VP+ AVG+VIG+ G+MIKK+QN+ G R+QF + DD +R + G PD+ Q
Sbjct: 256 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQF---KPDDGISPERAAQVMGPPDRCQH 312
Query: 105 ARARIEELI 113
A I ELI
Sbjct: 313 AAHVISELI 321
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 17/112 (15%)
Query: 6 FQQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGD 65
+Q++R +G+ D N F+ + DG + E+ +P + VG+VIGKGG+
Sbjct: 134 IEQAKRL---LGQIVDRCRNGPGFHNDVDGNSTVQEIP-------IPASKVGLVIGKGGE 183
Query: 66 MIKKLQNETGARVQFVQMREDDP----SDRRCMLSGSPDQVQEARARIEELI 113
IK+LQ TG ++ +Q D P +D+ ++G P +VQ+AR + E+I
Sbjct: 184 TIKQLQERTGVKMVMIQ---DGPLPTGADKPLRITGDPFKVQQAREMVLEII 232
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R C+L+G+P+ +++A+ +
Sbjct: 84 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIP-ERPCVLTGTPESIEQAKRLLG 142
Query: 111 ELID 114
+++D
Sbjct: 143 QIVD 146
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ--MREDDPSDRRCM 94
GG+ EVT+ VP G+VIGKGG+ IK + ++GA V+ + DP+ R
Sbjct: 352 GGIQEVTY-----TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPSTDPNLRIFT 406
Query: 95 LSGSPDQVQEARARIEELI 113
+ G P Q++ AR I+E +
Sbjct: 407 IRGLPPQIEVARHLIDEKV 425
>gi|194382840|dbj|BAG64590.1| unnamed protein product [Homo sapiens]
Length = 629
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 56/96 (58%), Gaps = 11/96 (11%)
Query: 24 GNMREF-NENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ 82
G RE NE G GG E I V +P+ AVG+VIG+ G+MIKK+QN+ G R+QF
Sbjct: 258 GGFREVRNEYGSRIGGN-----EGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQF-- 310
Query: 83 MREDD--PSDRRCMLSGSPDQVQEARARIEELIDSV 116
+ DD +R ++G PD+ Q A I +L+ SV
Sbjct: 311 -KPDDGTTPERIAQITGPPDRCQHAAEIITDLLRSV 345
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R CML+G+P+ VQ A+ ++
Sbjct: 106 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP-ERSCMLTGTPESVQSAKRLLD 164
Query: 111 ELID 114
++++
Sbjct: 165 QIVE 168
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 13/87 (14%)
Query: 31 ENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP-- 88
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q D P
Sbjct: 177 HHGDGPGNA------VQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQ---DGPQN 227
Query: 89 --SDRRCMLSGSPDQVQEARARIEELI 113
+D+ ++G P +VQ+A+ + ELI
Sbjct: 228 TGADKPLRITGDPYKVQQAKEMVLELI 254
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCM 94
GG+ E + VP G++IGKGG+ IK + ++GAR++ + DP+ +
Sbjct: 373 GGLQEFNF-----IVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFT 427
Query: 95 LSGSPDQVQEARARIEELI 113
+ G+P Q+ AR IEE I
Sbjct: 428 IRGTPQQIDYARQLIEEKI 446
>gi|449266765|gb|EMC77781.1| Far upstream element-binding protein 3, partial [Columba livia]
Length = 508
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 46/69 (66%), Gaps = 5/69 (7%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
I+V VP+ AVG+VIG+ G+MIKK+QN+ G R+QF + DD S+R + G PD+ Q
Sbjct: 245 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQF---KPDDGISSERVAQVMGLPDRCQH 301
Query: 105 ARARIEELI 113
A I ELI
Sbjct: 302 AAHIISELI 310
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 17/112 (15%)
Query: 6 FQQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGD 65
+Q++R +G+ D N F+ + DG + E+ +P + VG+VIGKGG+
Sbjct: 123 IEQAKRL---LGQIVDRCRNGPGFHNDVDGNSTIQEI-------LIPASKVGLVIGKGGE 172
Query: 66 MIKKLQNETGARVQFVQMREDDP----SDRRCMLSGSPDQVQEARARIEELI 113
IK+LQ TG ++ +Q D P +D+ ++G +VQ+AR + E+I
Sbjct: 173 TIKQLQERTGVKMIMIQ---DGPLPTGADKPLRITGDAFKVQQAREMVLEII 221
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R C+L+G P+ +++A+ +
Sbjct: 73 VPDKMVGFIIGRGGEQISRIQAESGCKIQIAPDSGGMP-ERPCVLTGMPESIEQAKRLLG 131
Query: 111 ELID 114
+++D
Sbjct: 132 QIVD 135
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ--MREDDPSDRRCM 94
GGM E+T+ VP G+VIGKGG+ IK + ++GA V+ + DP R
Sbjct: 341 GGMQEITY-----TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPGVRIFT 395
Query: 95 LSGSPDQVQEARARIEELI 113
+ G P Q++ AR I+E +
Sbjct: 396 IRGVPQQIELARHLIDEKV 414
>gi|383873059|ref|NP_001244672.1| far upstream element-binding protein 3 [Macaca mulatta]
gi|380787701|gb|AFE65726.1| far upstream element-binding protein 3 [Macaca mulatta]
gi|383414151|gb|AFH30289.1| far upstream element-binding protein 3 [Macaca mulatta]
gi|384950158|gb|AFI38684.1| far upstream element-binding protein 3 [Macaca mulatta]
Length = 572
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
I+V VP+ AVG+VIG+ G+MIKK+QN+ G R+QF + DD +R + G PD+ Q
Sbjct: 256 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQF---KPDDGISPERAAQVMGPPDRCQH 312
Query: 105 ARARIEELI 113
A I ELI
Sbjct: 313 AAHIISELI 321
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R C+L+G+P+ +++A+ +
Sbjct: 84 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIP-ERPCVLTGTPESIEQAKRLLG 142
Query: 111 ELID 114
+++D
Sbjct: 143 QIVD 146
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ--MREDDPSDRRCM 94
GG+ E+T+ VP G+VIGKGG+ IK + ++GA V+ + DP+ RR
Sbjct: 352 GGVQEITY-----TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFT 406
Query: 95 LSGSPDQVQEARARIEELI 113
+ G P Q++ AR I+E +
Sbjct: 407 IRGVPQQIEVARQLIDEKV 425
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 7/86 (8%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--- 88
NG G + + ++ +P + VG+VIG+GG+ IK+LQ TG ++ +Q D P
Sbjct: 150 NGPGFHNDIDSNSTIQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQ---DGPLPT 206
Query: 89 -SDRRCMLSGSPDQVQEARARIEELI 113
+D+ ++G +VQ+AR + E+I
Sbjct: 207 GADKPLRITGDAFKVQQAREMVLEII 232
>gi|440894384|gb|ELR46853.1| Far upstream element-binding protein 3, partial [Bos grunniens
mutus]
Length = 542
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
I+V VP+ AVG+VIG+ G+MIKK+QN+ G R+QF + DD +R + G PD+ Q
Sbjct: 228 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQF---KPDDGISPERAAQVMGPPDRCQH 284
Query: 105 ARARIEELI 113
A I ELI
Sbjct: 285 AAHVISELI 293
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 17/112 (15%)
Query: 6 FQQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGD 65
+Q++R +G+ D N F+ + DG + E+ +P + VG+VIGKGG+
Sbjct: 106 IEQAKRL---LGQIVDRCRNGPGFHNDVDGNSTVQEIP-------IPASKVGLVIGKGGE 155
Query: 66 MIKKLQNETGARVQFVQMREDDP----SDRRCMLSGSPDQVQEARARIEELI 113
IK+LQ TG ++ +Q D P +D+ ++G P +VQ+AR + E+I
Sbjct: 156 TIKQLQERTGVKMVMIQ---DGPLPTGADKPLRITGDPFKVQQAREMVLEII 204
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R C+L+G+P+ +++A+ +
Sbjct: 56 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIP-ERPCVLTGTPESIEQAKRLLG 114
Query: 111 ELID 114
+++D
Sbjct: 115 QIVD 118
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 7/84 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ--MREDDPSDRRCM 94
GG+ EVT+ VP G+VIGKGG+ IK + ++GA V+ + DP+ R
Sbjct: 324 GGIQEVTY-----TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPSTDPNLRIFT 378
Query: 95 LSGSPDQVQEARARIEELIDSVMV 118
+ G P Q++ AR I+E + +
Sbjct: 379 IRGLPPQIEVARHLIDEKVGGTSI 402
>gi|346716112|ref|NP_001231214.1| far upstream element (FUSE) binding protein 3 [Sus scrofa]
gi|336390571|gb|AEI54345.1| far upstream element binding protein 3 [Sus scrofa]
Length = 548
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
I+V VP+ AVG+VIG+ G+MIKK+QN+ G R+QF + DD +R + G PD+ Q
Sbjct: 256 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQF---KPDDGISPERAAQVMGPPDRCQH 312
Query: 105 ARARIEELI 113
A I ELI
Sbjct: 313 AAHVISELI 321
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R C+L+G+P+ +++A+ +
Sbjct: 84 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIP-ERPCVLTGTPESIEQAKRLLG 142
Query: 111 ELID 114
+++D
Sbjct: 143 QIVD 146
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 60/112 (53%), Gaps = 17/112 (15%)
Query: 6 FQQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGD 65
+Q++R +G+ D N F+ + DG + E+ +P + VG+VIGKGG+
Sbjct: 134 IEQAKRL---LGQIVDRCRNGPGFHNDVDGSSTIQEL-------LIPASKVGLVIGKGGE 183
Query: 66 MIKKLQNETGARVQFVQMREDDP----SDRRCMLSGSPDQVQEARARIEELI 113
IK+LQ TG ++ +Q D P +D+ ++G P +VQ AR + E+I
Sbjct: 184 TIKQLQERTGVKMVMIQ---DGPLPTGADKPLRITGDPFKVQVAREMVLEII 232
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ--MREDDPSDRRCM 94
GG+ E+T+ VP G+VIGKGG+ IK + ++GA V+ + DP R
Sbjct: 352 GGIQEITY-----TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPGLRVFT 406
Query: 95 LSGSPDQVQEARARIEELI 113
+ G P Q++ AR I+E +
Sbjct: 407 IRGVPQQIEVARHLIDEKV 425
>gi|426226097|ref|XP_004007190.1| PREDICTED: far upstream element-binding protein 3 [Ovis aries]
Length = 574
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
I+V VP+ AVG+VIG+ G+MIKK+QN+ G R+QF + DD +R + G PD+ Q
Sbjct: 263 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQF---KPDDGISPERAAQVMGPPDRCQH 319
Query: 105 ARARIEELI 113
A I ELI
Sbjct: 320 AAHVISELI 328
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 17/112 (15%)
Query: 6 FQQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGD 65
+Q++R +G+ D N F+ + DG + E+ +P + VG+VIGKGG+
Sbjct: 141 IEQAKRL---LGQIVDRCRNGPGFHNDVDGNSTVQEIP-------IPASKVGLVIGKGGE 190
Query: 66 MIKKLQNETGARVQFVQMREDDP----SDRRCMLSGSPDQVQEARARIEELI 113
IK+LQ TG ++ +Q D P +D+ ++G P +VQ+AR + E+I
Sbjct: 191 TIKQLQERTGVKMVMIQ---DGPLPTGADKPLRITGDPFKVQQAREMVLEII 239
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R C+L+G+P+ +++A+ +
Sbjct: 91 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIP-ERPCVLTGTPESIEQAKRLLG 149
Query: 111 ELID 114
+++D
Sbjct: 150 QIVD 153
Score = 43.1 bits (100), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 50 CVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ--MREDDPSDRRCMLSGSPDQVQEARA 107
VP G+VIGKGG+ IK + ++GA V+ + DPS R + G P Q++ AR
Sbjct: 362 TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPSTDPSLRIFTIRGLPPQIEVARH 421
Query: 108 RIEELI 113
I+E +
Sbjct: 422 LIDEKV 427
>gi|355567401|gb|EHH23742.1| hypothetical protein EGK_07278, partial [Macaca mulatta]
gi|355752991|gb|EHH57037.1| hypothetical protein EGM_06596, partial [Macaca fascicularis]
Length = 544
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
I+V VP+ AVG+VIG+ G+MIKK+QN+ G R+QF + DD +R + G PD+ Q
Sbjct: 228 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQF---KPDDGISPERAAQVMGPPDRCQH 284
Query: 105 ARARIEELI 113
A I ELI
Sbjct: 285 AAHIISELI 293
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R C+L+G+P+ +++A+ +
Sbjct: 56 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIP-ERPCVLTGTPESIEQAKRLLG 114
Query: 111 ELID 114
+++D
Sbjct: 115 QIVD 118
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ--MREDDPSDRRCM 94
GG+ E+T+ VP G+VIGKGG+ IK + ++GA V+ + DP+ RR
Sbjct: 324 GGVQEITY-----TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFT 378
Query: 95 LSGSPDQVQEARARIEELI 113
+ G P Q++ AR I+E +
Sbjct: 379 IRGVPQQIEVARQLIDEKV 397
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 7/95 (7%)
Query: 23 FGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ 82
G + + NG G + + ++ +P + VG+VIG+GG+ IK+LQ TG ++ +Q
Sbjct: 113 LGQIVDRCRNGPGFHNDIDSNSTIQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQ 172
Query: 83 MREDDP----SDRRCMLSGSPDQVQEARARIEELI 113
D P +D+ ++G +VQ+AR + E+I
Sbjct: 173 ---DGPLPTGADKPLRITGDAFKVQQAREMVLEII 204
>gi|301758860|ref|XP_002915252.1| PREDICTED: far upstream element-binding protein 3-like [Ailuropoda
melanoleuca]
Length = 572
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
I+V VP+ AVG+VIG+ G+MIKK+QN+ G R+QF + DD +R + G PD+ Q
Sbjct: 256 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQF---KPDDGISPERAAQVMGPPDRCQH 312
Query: 105 ARARIEELI 113
A I ELI
Sbjct: 313 AAHVINELI 321
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 17/112 (15%)
Query: 6 FQQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGD 65
+Q++R +G+ D N F+ + DG + E+ +P + VG+VIGKGG+
Sbjct: 134 IEQAKRL---LGQIVDRCRNGPGFHNDIDGNSTIQEI-------LIPASKVGLVIGKGGE 183
Query: 66 MIKKLQNETGARVQFVQMREDDP----SDRRCMLSGSPDQVQEARARIEELI 113
IK+LQ TG ++ +Q D P +D+ ++G P +VQ+AR + E+I
Sbjct: 184 TIKQLQERTGVKMVMIQ---DGPLPTGADKPLRITGDPFKVQQAREMVLEII 232
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R C+L+G+P+ +++A+ +
Sbjct: 84 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIP-ERPCVLTGTPESIEQAKRLLG 142
Query: 111 ELID 114
+++D
Sbjct: 143 QIVD 146
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ--MREDDPSDRRCM 94
GG+ E+T+ VP G+VIGKGG+ IK + ++GA V+ + DP+ R
Sbjct: 352 GGVQEITY-----TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFT 406
Query: 95 LSGSPDQVQEARARIEELI 113
+ G P Q++ AR I+E +
Sbjct: 407 IRGIPQQIEVARHLIDEKV 425
>gi|1575609|gb|AAC50893.1| FUSE binding protein 3, partial [Homo sapiens]
Length = 600
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
I+V VP+ AVG+VIG+ G+MIKK+QN+ G R+QF + DD +R + G PD+ Q
Sbjct: 284 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQF---KPDDGISPERAAQVMGPPDRCQH 340
Query: 105 ARARIEELI 113
A I ELI
Sbjct: 341 AAHIISELI 349
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R C+L+G+P+ +++A+ +
Sbjct: 112 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIP-ERPCVLTGTPESIEQAKRLLG 170
Query: 111 ELID 114
+++D
Sbjct: 171 QIVD 174
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ--MREDDPSDRRCM 94
GG+ E+T+ VP G+VIGKGG+ IK + ++GA V+ + DP+ RR
Sbjct: 380 GGVQEITY-----TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFT 434
Query: 95 LSGSPDQVQEARARIEELI 113
+ G P Q++ AR I+E +
Sbjct: 435 IRGVPQQIEVARQLIDEKV 453
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 7/86 (8%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--- 88
NG G + + ++ +P + VG+VIG+GG+ IK+LQ TG ++ +Q D P
Sbjct: 178 NGPGFHNDIDSNSTIQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQ---DGPLPT 234
Query: 89 -SDRRCMLSGSPDQVQEARARIEELI 113
+D+ ++G +VQ+AR + E+I
Sbjct: 235 GADKPLRITGDAFKVQQAREMVLEII 260
>gi|281349495|gb|EFB25079.1| hypothetical protein PANDA_003250 [Ailuropoda melanoleuca]
Length = 571
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
I+V VP+ AVG+VIG+ G+MIKK+QN+ G R+QF + DD +R + G PD+ Q
Sbjct: 256 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQF---KPDDGISPERAAQVMGPPDRCQH 312
Query: 105 ARARIEELI 113
A I ELI
Sbjct: 313 AAHVINELI 321
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 17/112 (15%)
Query: 6 FQQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGD 65
+Q++R +G+ D N F+ + DG + E+ +P + VG+VIGKGG+
Sbjct: 134 IEQAKRL---LGQIVDRCRNGPGFHNDIDGNSTIQEI-------LIPASKVGLVIGKGGE 183
Query: 66 MIKKLQNETGARVQFVQMREDDP----SDRRCMLSGSPDQVQEARARIEELI 113
IK+LQ TG ++ +Q D P +D+ ++G P +VQ+AR + E+I
Sbjct: 184 TIKQLQERTGVKMVMIQ---DGPLPTGADKPLRITGDPFKVQQAREMVLEII 232
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R C+L+G+P+ +++A+ +
Sbjct: 84 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIP-ERPCVLTGTPESIEQAKRLLG 142
Query: 111 ELID 114
+++D
Sbjct: 143 QIVD 146
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ--MREDDPSDRRCM 94
GG+ E+T+ VP G+VIGKGG+ IK + ++GA V+ + DP+ R
Sbjct: 352 GGVQEITY-----TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFT 406
Query: 95 LSGSPDQVQEARARIEELI 113
+ G P Q++ AR I+E +
Sbjct: 407 IRGIPQQIEVARHLIDEKV 425
>gi|56090186|ref|NP_001007777.1| far upstream element-binding protein 3 [Danio rerio]
gi|55715803|gb|AAH85379.1| Zgc:101598 [Danio rerio]
Length = 572
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 52/86 (60%), Gaps = 7/86 (8%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--- 88
NG G + + V ++ +P + VG+VIGKGGD IK+LQ TG ++ +Q DDP
Sbjct: 156 NGPGFHSQMDGSSAVQEILIPASKVGLVIGKGGDTIKQLQERTGVKMIMIQ---DDPMPT 212
Query: 89 -SDRRCMLSGSPDQVQEARARIEELI 113
SD+ +SG P +VQ+AR + E+I
Sbjct: 213 GSDKPLRISGDPYKVQQARELVVEII 238
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 45/72 (62%), Gaps = 5/72 (6%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
I V VP+ AVG+VIG+ G+MIKK+QN+ G R+QF + DD DR + G P++ Q
Sbjct: 261 IDVAVPRFAVGIVIGRNGEMIKKIQNDAGVRIQF---KPDDGISPDRVAQVMGQPERCQH 317
Query: 105 ARARIEELIDSV 116
A I EL+ +
Sbjct: 318 AVHLINELVQTA 329
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ--MREDDPSDRRCM 94
GG+ EVT+ +P G+VIGKGG+ IK + ++GA V+ + DP+ R
Sbjct: 357 GGLQEVTY-----TIPADKCGLVIGKGGETIKNINQQSGAHVELQRNPPPNTDPNVRTFS 411
Query: 95 LSGSPDQVQEARARIEELI 113
+ GSP Q++ AR I++ I
Sbjct: 412 IRGSPQQMEMARQLIDDKI 430
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+ ++Q + DR C L+G+P+ +++A+ +
Sbjct: 90 VPDKMVGFIIGRGGEQITRIQLESNCKIQ-IAADSGGMMDRPCTLTGTPESIEQAKRLLG 148
Query: 111 ELID 114
+++D
Sbjct: 149 QIVD 152
>gi|47223865|emb|CAG06042.1| unnamed protein product [Tetraodon nigroviridis]
Length = 692
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/66 (43%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
+ VP A VG++IG+GG+ I K+Q E+G +VQF P +RR L+GSPD +Q A+A
Sbjct: 130 ECSVPDAMVGLIIGRGGEQINKIQQESGCKVQFAHDTAGLP-ERRVSLTGSPDAIQRAKA 188
Query: 108 RIEELI 113
I++++
Sbjct: 189 LIDDIV 194
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 49/76 (64%), Gaps = 5/76 (6%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQE 104
+ + VP+ +VGVVIG+ G+MIKK+Q++ G ++QF + DD + ++ ++ G D+ Q
Sbjct: 330 LNIAVPRHSVGVVIGRNGEMIKKIQSDAGVKIQF---KPDDGTGPEKMALIMGPADRCQH 386
Query: 105 ARARIEELIDSVMVEQ 120
A + I +L+ SV +
Sbjct: 387 AASIITDLLQSVRARE 402
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
VP G+VIG+GG+ +K + +TGA V+ DP+ + + GSP Q+ A+
Sbjct: 432 VPAHKCGLVIGRGGENVKSINQQTGAFVKMTHQPPPNGDPNFKLFTIRGSPQQIDHAKQL 491
Query: 109 IEELIDS 115
IEE I++
Sbjct: 492 IEEKIEA 498
Score = 38.5 bits (88), Expect = 0.91, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS-DRRCMLSGSPDQVQ 103
++ +P G++IG+GG+ IK+LQ G ++ +Q P+ D+ + G P +VQ
Sbjct: 210 EMIIPAGKAGLIIGRGGETIKQLQERAGVKMILIQDGSQPPNIDKPLRIIGDPYKVQ 266
>gi|410979294|ref|XP_003996020.1| PREDICTED: far upstream element-binding protein 3 [Felis catus]
Length = 572
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
I+V VP+ AVG+VIG+ G+MIKK+QN+ G R+QF + DD +R + G PD+ Q
Sbjct: 256 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQF---KPDDGVSPERAAQVMGPPDRCQH 312
Query: 105 ARARIEELI 113
A I ELI
Sbjct: 313 AAHVINELI 321
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 17/112 (15%)
Query: 6 FQQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGD 65
+Q++R +G+ D N F+ + DG + E+ +P + VG+VIGKGG+
Sbjct: 134 IEQAKRL---LGQIVDRCRNGPGFHNDIDGNSTIQEI-------LIPASKVGLVIGKGGE 183
Query: 66 MIKKLQNETGARVQFVQMREDDP----SDRRCMLSGSPDQVQEARARIEELI 113
IK+LQ TG ++ +Q D P +D+ ++G P +VQ+AR + E+I
Sbjct: 184 TIKQLQERTGVKMVMIQ---DGPLPTGADKPLRITGDPFKVQQAREMVLEII 232
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R C+L+G+P+ +++A+ +
Sbjct: 84 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIP-ERPCVLTGTPESIEQAKRLLG 142
Query: 111 ELID 114
+++D
Sbjct: 143 QIVD 146
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ--MREDDPSDRRCM 94
GG+ E+T+ VP G+VIGKGG+ IK + ++GA V+ + DPS R
Sbjct: 352 GGVQEITY-----TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPSTDPSLRVFT 406
Query: 95 LSGSPDQVQEARARIEELI 113
+ G P Q++ AR I+E +
Sbjct: 407 IRGVPQQIEVARHLIDEKV 425
>gi|350529341|ref|NP_001123831.2| KH-type splicing regulatory protein [Xenopus (Silurana) tropicalis]
Length = 675
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I V VP+ +VGVVIG+ GDMIKK+QN+ G R+QF Q P D+ + G PD+ + A
Sbjct: 277 IDVPVPRHSVGVVIGRNGDMIKKIQNDAGVRIQFKQDDGTGP-DKIAHIMGPPDRCEHAA 335
Query: 107 ARIEELIDSV 116
I +L+ S+
Sbjct: 336 RIISDLLQSL 345
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q E+G +VQ P +R L+GSPD VQ+A+ ++
Sbjct: 100 VPDGMVGLIIGRGGEQINKIQQESGCKVQISPDSGGMP-ERVVSLTGSPDSVQKAKMLLD 158
Query: 111 ELI 113
+++
Sbjct: 159 DIV 161
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 58/106 (54%), Gaps = 12/106 (11%)
Query: 24 GNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ- 82
G +F++N +G+ G + ++ +P G++IGKGG+ IK+LQ G ++ +Q
Sbjct: 167 GPPSQFHDNSNGQNGSLQ------EIMIPAGKAGLIIGKGGETIKQLQERAGVKMILIQD 220
Query: 83 MREDDPSDRRCMLSGSPDQVQEARARIEELIDSVMVEQFSGANFDK 128
++ D+ + G P +VQ+A E ++D ++ + ANFD+
Sbjct: 221 GSQNTNMDKPLRIVGEPFKVQQA---CEMVMD--LLRERDQANFDR 261
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 50 CVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCMLSGSPDQVQEARA 107
+P G+VIG+GG+ +K + +TGA V+ + DP+ + + G+P Q+ A+
Sbjct: 381 SIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQPPPNGDPNFKMFTIRGNPQQIDHAKQ 440
Query: 108 RIEELID 114
IEE I+
Sbjct: 441 LIEEKIE 447
>gi|344271275|ref|XP_003407465.1| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 3-like [Loxodonta africana]
Length = 625
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
I+V VP+ AVG+VIG+ G+MIKK+QN+ G R+QF + DD +R + G PD+ Q
Sbjct: 256 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQF---KPDDGISPERAAQVMGPPDRCQH 312
Query: 105 ARARIEELI 113
A I ELI
Sbjct: 313 AAHFINELI 321
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 17/112 (15%)
Query: 6 FQQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGD 65
+Q++R +G+ D N F+ + DG + E+ +P + VG+VIGKGG+
Sbjct: 134 IEQAKRL---LGQIVDRCRNGPGFHNDIDGNSTIQEI-------LIPASKVGLVIGKGGE 183
Query: 66 MIKKLQNETGARVQFVQMREDDP----SDRRCMLSGSPDQVQEARARIEELI 113
IK+LQ TG ++ +Q D P +D+ ++G P +VQ+AR + E+I
Sbjct: 184 TIKQLQERTGVKMVMIQ---DGPLPXGADKPLRITGDPFKVQQAREMVLEII 232
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R C+L+G+P+ +++A+ +
Sbjct: 84 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIP-ERPCVLTGTPESIEQAKRLLG 142
Query: 111 ELID 114
+++D
Sbjct: 143 QIVD 146
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ--MREDDPSDRRCM 94
GG+ E+T+ VP G+VIGKGG+ IK + ++GA V+ + DP+ R
Sbjct: 352 GGVQEITY-----TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFT 406
Query: 95 LSGSPDQVQEARARIEELI 113
+ G P Q++ AR I+E +
Sbjct: 407 IRGVPQQIEVARHLIDEKV 425
>gi|12654955|gb|AAH01325.1| Unknown (protein for IMAGE:3456579), partial [Homo sapiens]
Length = 372
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
I+V VP+ AVG+VIG+ G+MIKK+QN+ G R+QF + DD +R + G PD+ Q
Sbjct: 12 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQF---KPDDGISPERAAQVMGPPDRCQH 68
Query: 105 ARARIEELI 113
A I ELI
Sbjct: 69 AAHIISELI 77
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ--MREDDPSDRRCM 94
GG+ E+T+ V P G+VIGKGG+ IK + ++GA V+ + DP+ RR
Sbjct: 108 GGVQEITYTV-----PADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFT 162
Query: 95 LSGSPDQVQEARARIEELI 113
+ G P Q++ AR I+E +
Sbjct: 163 IRGVPQQIEVARQLIDEKV 181
>gi|354502186|ref|XP_003513168.1| PREDICTED: far upstream element-binding protein 3-like isoform 1
[Cricetulus griseus]
Length = 574
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
I+V VP+ AVG+VIG+ G+MIKK+QN+ G R+QF + DD +R + G PD+ Q
Sbjct: 256 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQF---KPDDGISPERAAQVMGPPDRCQH 312
Query: 105 ARARIEELI 113
A I ELI
Sbjct: 313 AAHIINELI 321
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 17/112 (15%)
Query: 6 FQQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGD 65
+Q++R +G+ D N F+ + DG + E+ +P + VG+VIGKGG+
Sbjct: 134 IEQAKRL---LGQIVDRCRNGPGFHNDIDGNSTIQEL-------LIPASKVGLVIGKGGE 183
Query: 66 MIKKLQNETGARVQFVQMREDDP----SDRRCMLSGSPDQVQEARARIEELI 113
IK+LQ TG ++ +Q D P +D+ ++G P +VQ+AR + E+I
Sbjct: 184 TIKQLQERTGVKMVMIQ---DGPLPTGADKPLRITGDPFKVQQAREMVLEII 232
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R C+L+G+P+ +++A+ +
Sbjct: 84 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIP-ERPCVLTGTPESIEQAKRLLG 142
Query: 111 ELID 114
+++D
Sbjct: 143 QIVD 146
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ--MREDDPSDRRCM 94
GG+ E+T+ VP G+VIGKGG+ IK + ++GA V+ + DP+ R
Sbjct: 352 GGVQEITY-----TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFT 406
Query: 95 LSGSPDQVQEARARIEELI 113
+ G+P Q++ AR I+E +
Sbjct: 407 IRGAPQQIEVARHLIDEKV 425
>gi|57529674|ref|NP_001006535.1| far upstream element-binding protein 1 [Gallus gallus]
gi|53136708|emb|CAG32683.1| hypothetical protein RCJMB04_32l4 [Gallus gallus]
Length = 627
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 47/71 (66%), Gaps = 5/71 (7%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQEA 105
+V +P+ AVG+VIG+ G+MIKK+QN+ G R+QF + DD DR ++G PD+ Q A
Sbjct: 260 EVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQF---KPDDGTTPDRIAQITGPPDRCQHA 316
Query: 106 RARIEELIDSV 116
I +L+ SV
Sbjct: 317 AEIITDLLRSV 327
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 8/99 (8%)
Query: 16 IGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETG 75
+ ND+FGN R M E + VP VG +IG+GG+ I ++Q E+G
Sbjct: 76 VAPQNDSFGNQLPPMHQQQ-RSVMTE------EYKVPDGMVGFIIGRGGEQISRIQQESG 128
Query: 76 ARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
++Q P +R CML+G+P+ VQ A+ ++++++
Sbjct: 129 CKIQIAPDSGGLP-ERSCMLTGTPESVQSAKRLLDQIVE 166
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 13/87 (14%)
Query: 31 ENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP-- 88
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q D P
Sbjct: 175 HHGDGPGNA------VQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQ---DGPQN 225
Query: 89 --SDRRCMLSGSPDQVQEARARIEELI 113
+D+ ++G P +VQ+A+ + ELI
Sbjct: 226 TGADKPLRITGDPYKVQQAKEMVLELI 252
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCM 94
GG+ E + VP G++IGKGG+ IK + ++GAR++ + DP+ +
Sbjct: 356 GGLQEFNF-----IVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKMFT 410
Query: 95 LSGSPDQVQEARARIEELI 113
+ G+P Q+ AR IEE I
Sbjct: 411 IRGTPQQIDYARQLIEEKI 429
>gi|354502188|ref|XP_003513169.1| PREDICTED: far upstream element-binding protein 3-like isoform 2
[Cricetulus griseus]
Length = 481
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
I+V VP+ AVG+VIG+ G+MIKK+QN+ G R+QF + DD +R + G PD+ Q
Sbjct: 169 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQF---KPDDGISPERAAQVMGPPDRCQH 225
Query: 105 ARARIEELI 113
A I ELI
Sbjct: 226 AAHIINELI 234
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 45/70 (64%), Gaps = 7/70 (10%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP----SDRRCMLSGSPDQVQ 103
++ +P + VG+VIGKGG+ IK+LQ TG ++ +Q D P +D+ ++G P +VQ
Sbjct: 79 ELLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQ---DGPLPTGADKPLRITGDPFKVQ 135
Query: 104 EARARIEELI 113
+AR + E+I
Sbjct: 136 QAREMVLEII 145
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 56 VGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
VG +IG+GG+ I ++Q E+G ++Q P +R C+L+G+P+ +++A+ + +++D
Sbjct: 2 VGFIIGRGGEQISRIQAESGCKIQIASESSGIP-ERPCVLTGTPESIEQAKRLLGQIVD 59
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ--MREDDPSDRRCM 94
GG+ E+T+ VP G+VIGKGG+ IK + ++GA V+ + DP+ R
Sbjct: 265 GGVQEITY-----TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFT 319
Query: 95 LSGSPDQVQEARARIEELI 113
+ G+P Q++ AR I+E +
Sbjct: 320 IRGAPQQIEVARHLIDEKV 338
>gi|359320464|ref|XP_849868.3| PREDICTED: far upstream element-binding protein 3 isoform 1 [Canis
lupus familiaris]
Length = 554
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
I+V VP+ AVG+VIG+ G+MIKK+QN+ G R+QF + DD +R + G PD+ Q
Sbjct: 256 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQF---KPDDGISPERAAQVMGPPDRCQH 312
Query: 105 ARARIEELI 113
A I ELI
Sbjct: 313 AAHVINELI 321
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 17/112 (15%)
Query: 6 FQQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGD 65
+Q++R +G+ D N F+ + DG + E+ +P + VG+VIGKGG+
Sbjct: 134 IEQAKRL---LGQIVDRCRNGPGFHNDIDGNSTIQEI-------LIPASKVGLVIGKGGE 183
Query: 66 MIKKLQNETGARVQFVQMREDDP----SDRRCMLSGSPDQVQEARARIEELI 113
IK+LQ TG ++ +Q D P +D+ ++G P +VQ+AR + E+I
Sbjct: 184 TIKQLQERTGVKMVMIQ---DGPLPTGADKPLRITGDPFKVQQAREMVLEII 232
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R C+L+G+P+ +++A+ +
Sbjct: 84 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIP-ERPCVLTGTPESIEQAKRLLG 142
Query: 111 ELID 114
+++D
Sbjct: 143 QIVD 146
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ--MREDDPSDRRCM 94
GG+ E+T+ VP G+VIGKGGD IK + ++GA V+ + DP+ R
Sbjct: 352 GGVQEITY-----TVPADKCGLVIGKGGDNIKSINQQSGAHVELQRNPPPNTDPNLRIFT 406
Query: 95 LSGSPDQVQEARARIEELI 113
+ G P Q++ AR I+E +
Sbjct: 407 IRGIPQQIEVARHLIDEKV 425
>gi|432116592|gb|ELK37385.1| Far upstream element-binding protein 3 [Myotis davidii]
Length = 651
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
I+V VP+ AVG+VIG+ G+MIKK+QN+ G R+QF + DD +R + G PD+ Q
Sbjct: 256 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQF---KPDDGISPERAAQVMGPPDRCQH 312
Query: 105 ARARIEELI 113
A I ELI
Sbjct: 313 AAHVINELI 321
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 17/112 (15%)
Query: 6 FQQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGD 65
+Q++R +G+ D N F+ + DG + E+ +P + VG+VIGKGG+
Sbjct: 134 IEQAKRL---LGQIVDRCRNGPGFHNDIDGNSTIQEI-------LIPASKVGLVIGKGGE 183
Query: 66 MIKKLQNETGARVQFVQMREDDP----SDRRCMLSGSPDQVQEARARIEELI 113
IK+LQ TG ++ +Q D P +D+ ++G P +VQ+AR + E+I
Sbjct: 184 TIKQLQERTGVKMVMIQ---DGPLPTGADKPLRITGDPFKVQQAREMVLEII 232
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R C+L+G+P+ +++A+ +
Sbjct: 84 VPDKMVGFIIGRGGEQISRIQTESGCKIQIASESSGIP-ERPCVLTGTPESIEQAKRLLG 142
Query: 111 ELID 114
+++D
Sbjct: 143 QIVD 146
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ--MREDDPSDRRCM 94
GG+ E+T+ VP G+VIGKGG+ IK + ++GA V+ + DP+ R
Sbjct: 352 GGIQEITY-----TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFT 406
Query: 95 LSGSPDQVQEARARIEELI 113
+ G P Q++ AR I+E +
Sbjct: 407 IRGIPQQIEVARHLIDEKV 425
>gi|431898917|gb|ELK07287.1| Far upstream element-binding protein 3 [Pteropus alecto]
Length = 595
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
I+V VP+ AVG+VIG+ G+MIKK+QN+ G R+QF + DD +R + G PD+ Q
Sbjct: 256 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQF---KPDDGISPERAAQVMGPPDRCQH 312
Query: 105 ARARIEELI 113
A I ELI
Sbjct: 313 AAHIINELI 321
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 46/72 (63%), Gaps = 7/72 (9%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP----SDRRCMLSGSPDQ 101
V ++ +P + VG+VIGKGG+ IK+LQ TG ++ +Q D P +D+ ++G P +
Sbjct: 164 VQEILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQ---DGPLPTGADKPLRITGDPFK 220
Query: 102 VQEARARIEELI 113
VQ+AR + E+I
Sbjct: 221 VQQAREMVLEII 232
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R C+L+G+P+ +++A+ +
Sbjct: 84 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIP-ERPCVLTGTPESIEQAKRLLG 142
Query: 111 ELID 114
+++D
Sbjct: 143 QIVD 146
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ--MREDDPSDRRCM 94
GG+ E+T+ VP G+VIGKGG+ IK + ++GA V+ + DPS R
Sbjct: 352 GGIQEITY-----TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPSLRVFT 406
Query: 95 LSGSPDQVQEARARIEELI 113
+ G P Q++ AR I+E +
Sbjct: 407 IRGVPQQIEVARHLIDEKV 425
>gi|344257955|gb|EGW14059.1| Far upstream element-binding protein 3 [Cricetulus griseus]
Length = 493
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
I+V VP+ AVG+VIG+ G+MIKK+QN+ G R+QF + DD +R + G PD+ Q
Sbjct: 179 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQF---KPDDGISPERAAQVMGPPDRCQH 235
Query: 105 ARARIEELI 113
A I ELI
Sbjct: 236 AAHIINELI 244
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 38/124 (30%), Positives = 63/124 (50%), Gaps = 14/124 (11%)
Query: 8 QSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMI 67
R+ ++ +G+ D N F+ + DG + E+ +P + VG+VIGKGG+ I
Sbjct: 56 HQRQAKRLLGQIVDRCRNGPGFHNDIDGNSTIQELL-------IPASKVGLVIGKGGETI 108
Query: 68 KKLQNETGARVQFVQMREDDP----SDRRCMLSGSPDQVQEARARIEELIDSVMVEQFSG 123
K+LQ TG ++ +Q D P +D+ ++G P +VQ+AR + E+I F G
Sbjct: 109 KQLQERTGVKMVMIQ---DGPLPTGADKPLRITGDPFKVQQAREMVLEIIREKDQADFRG 165
Query: 124 ANFD 127
D
Sbjct: 166 VRGD 169
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCM 94
GG+ E+T+ V P G+VIGKGG+ IK + ++GA V+ + DP+ R
Sbjct: 275 GGVQEITYTV-----PADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFT 329
Query: 95 LSGSPDQVQEARARIEELI 113
+ G+P Q++ AR I+E +
Sbjct: 330 IRGAPQQIEVARHLIDEKV 348
>gi|74198585|dbj|BAE39771.1| unnamed protein product [Mus musculus]
Length = 654
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 43/112 (38%), Positives = 63/112 (56%), Gaps = 12/112 (10%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ++ + R+ F +R NE G GG E I V +P+ AVG+VIG+ G+M
Sbjct: 241 QQAKEMVLELIRDQGGFREVR--NEYGSRIGGN-----EGIDVPIPRFAVGIVIGRNGEM 293
Query: 67 IKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+QN+ G +QF + DD + DR ++G PD+ Q A I +L+ SV
Sbjct: 294 IKKIQNDAGVGIQF---KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSV 342
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 7/95 (7%)
Query: 20 NDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQ 79
ND+FG R M E + VP VG +IG+GG+ I ++Q E+G ++Q
Sbjct: 78 NDSFGAQLPPMHQQQSRSVMTE------EYKVPDGMVGFIIGRGGEQISRIQQESGCKIQ 131
Query: 80 FVQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
P +R CML+G+P+ VQ A+ ++++++
Sbjct: 132 IAPDSGGLP-ERSCMLTGTPESVQSAKRLLDQIVE 165
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 7/83 (8%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSD 90
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q ++ +D
Sbjct: 175 HGDGPGN------AVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 228
Query: 91 RRCMLSGSPDQVQEARARIEELI 113
+ ++G P +VQ+A+ + ELI
Sbjct: 229 KPLRITGDPYKVQQAKEMVLELI 251
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
VP G++IGKGG+ IK + ++GAR++ + DP+ + + G+P Q+ AR
Sbjct: 379 VPTGKTGLIIGKGGETIKSISQQSGARIELQRSPPPNADPNMKLFTIRGTPQQIDYARQL 438
Query: 109 IEELI 113
IEE I
Sbjct: 439 IEEKI 443
>gi|119608345|gb|EAW87939.1| hCG31253, isoform CRA_b [Homo sapiens]
Length = 530
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
I+V VP+ AVG+VIG+ G+MIKK+QN+ G R+QF + DD +R + G PD+ Q
Sbjct: 169 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQF---KPDDGISPERAAQVMGPPDRCQH 225
Query: 105 ARARIEELI 113
A I ELI
Sbjct: 226 AAHIISELI 234
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ--MREDDPSDRRCM 94
GG+ E+T+ VP G+VIGKGG+ IK + ++GA V+ + DP+ RR
Sbjct: 265 GGVQEITY-----TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFT 319
Query: 95 LSGSPDQVQEARARIEELI 113
+ G P Q++ AR I+E +
Sbjct: 320 IRGVPQQIEVARQLIDEKV 338
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 56 VGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
VG +IG+GG+ I ++Q E+G ++Q P +R C+L+G+P+ +++A+ + +++D
Sbjct: 2 VGFIIGRGGEQISRIQAESGCKIQIASESSGIP-ERPCVLTGTPESIEQAKRLLGQIVD 59
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 52/95 (54%), Gaps = 7/95 (7%)
Query: 23 FGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ 82
G + + NG G + + ++ +P + VG+VIG+GG+ IK+LQ TG ++ +Q
Sbjct: 54 LGQIVDRCRNGPGFHNDIDSNSTIQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQ 113
Query: 83 MREDDP----SDRRCMLSGSPDQVQEARARIEELI 113
D P +D+ ++G +VQ+AR + E+I
Sbjct: 114 ---DGPLPTGADKPLRITGDAFKVQQAREMVLEII 145
>gi|390458450|ref|XP_002806580.2| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 3 [Callithrix jacchus]
Length = 773
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
I+V VP+ AVG+VIG+ G+MIKK+QN+ G R+QF + DD +R + G PD+ Q
Sbjct: 372 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQF---KPDDGISPERAAQVMGPPDRCQH 428
Query: 105 ARARIEELI 113
A I ELI
Sbjct: 429 AAHIINELI 437
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R C+L+G+P+ +++A+ +
Sbjct: 200 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIP-ERPCVLTGTPESIEQAKRLLG 258
Query: 111 ELID 114
+++D
Sbjct: 259 QIVD 262
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 7/95 (7%)
Query: 23 FGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ 82
G + + NG G + + ++ +P + VG+VIG+GG+ IK+LQ TG ++ +Q
Sbjct: 257 LGQIVDRCRNGPGFHNDIDSNSTIQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQ 316
Query: 83 MREDDP----SDRRCMLSGSPDQVQEARARIEELI 113
D P +D+ ++G P +VQ+AR + E+I
Sbjct: 317 ---DGPLPTGADKPLRITGDPFKVQQAREMVLEII 348
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ--MREDDPSDRRCM 94
GG+ E+T+ VP G+VIGKGG+ IK + ++GA V+ + DP+ RR
Sbjct: 468 GGVQEITY-----TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFT 522
Query: 95 LSGSPDQVQEARARIEELI 113
+ G P Q++ AR I+E +
Sbjct: 523 IRGVPQQIEVARQLIDEKV 541
>gi|348570404|ref|XP_003470987.1| PREDICTED: far upstream element-binding protein 3-like [Cavia
porcellus]
Length = 605
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
I+V VP+ AVG+VIG+ G+MIKK+QN+ G R+QF + DD +R + G PD+ Q
Sbjct: 256 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQF---KPDDGVSPERAAQVMGPPDRCQH 312
Query: 105 ARARIEELI 113
A I ELI
Sbjct: 313 AAHIINELI 321
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R C+L+G+P+ +++A+ +
Sbjct: 84 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIP-ERPCVLTGTPESIEQAKRLLG 142
Query: 111 ELID 114
+++D
Sbjct: 143 QIVD 146
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 7/95 (7%)
Query: 23 FGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ 82
G + + NG G E V ++ +P + VG+VIGKGG+ IK+LQ G ++ +Q
Sbjct: 141 LGQIVDRCRNGPGFHSDAEGNSTVQEILIPASKVGLVIGKGGETIKQLQERAGVKMVMIQ 200
Query: 83 MREDDP----SDRRCMLSGSPDQVQEARARIEELI 113
D P +D+ ++G P +VQ+AR + E++
Sbjct: 201 ---DGPLPTGTDKPLRITGDPFKVQQAREMVLEIV 232
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ--MREDDPSDRRCM 94
GG+ E+T+ VP G+VIGKGG+ IK + ++GA V+ + DP R
Sbjct: 352 GGVQEITY-----TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPSTDPGLRLFT 406
Query: 95 LSGSPDQVQEARARIEELI 113
+ G P Q++ AR I+E +
Sbjct: 407 IRGVPQQIEVARHLIDEKV 425
>gi|449478185|ref|XP_002195336.2| PREDICTED: far upstream element-binding protein 3 [Taeniopygia
guttata]
Length = 558
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 46/69 (66%), Gaps = 5/69 (7%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
I+V VP+ AVG+VIG+ G+MIKK+QN+ G R+QF + DD ++R + G PD+ Q
Sbjct: 293 IEVSVPRYAVGIVIGRNGEMIKKIQNDAGVRIQF---KPDDGISTERVAQVMGLPDRCQH 349
Query: 105 ARARIEELI 113
A I ELI
Sbjct: 350 AAHIISELI 358
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R C+L+G+P+ +++A+ +
Sbjct: 121 VPDKMVGFIIGRGGEQISRIQIESGCKIQIAPDSGGMP-ERPCVLTGTPESIEQAKRLLG 179
Query: 111 ELID 114
+++D
Sbjct: 180 QIVD 183
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 17/126 (13%)
Query: 6 FQQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGD 65
+Q++R +G+ D N F+ + DG + E+ +P + VG+VIGKGG+
Sbjct: 171 IEQAKRL---LGQIVDRCRNGPGFHNDVDGNSTIQEI-------LIPASKVGLVIGKGGE 220
Query: 66 MIKKLQNETGARVQFVQMREDDP----SDRRCMLSGSPDQVQEARARIEELIDSVMVEQF 121
IK+LQ TG ++ +Q D P +D+ ++G +VQ+AR + E+I F
Sbjct: 221 TIKQLQERTGVKMIMIQ---DGPLPTGADKPLRITGDAFKVQQAREMVLEIIREKDQADF 277
Query: 122 SGANFD 127
G D
Sbjct: 278 RGVRSD 283
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ--MREDDPSDRRCM 94
GG+ E+T+ VP G+VIGKGG+ IK + ++GA V+ + DP R
Sbjct: 389 GGVQEITY-----TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPGVRIFT 443
Query: 95 LSGSPDQVQEARARIEELI 113
+ G P Q++ AR I+E +
Sbjct: 444 IRGVPQQIELARHLIDEKV 462
>gi|355689346|gb|AER98803.1| far upstream element binding protein 3 [Mustela putorius furo]
Length = 450
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
I+V VP+ AVG+VIG+ G+MIKK+QN+ G R+QF + DD +R + G PD+ Q
Sbjct: 256 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQF---KPDDGISPERAAQVMGPPDRCQH 312
Query: 105 ARARIEELI 113
A I ELI
Sbjct: 313 AAHVINELI 321
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 17/112 (15%)
Query: 6 FQQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGD 65
+Q++R +G+ D N F+ + DG + E+ +P + VG+VIGKGG+
Sbjct: 134 IEQAKRL---LGQIVDRCRNGPGFHNDIDGNSTIQEI-------LIPASKVGLVIGKGGE 183
Query: 66 MIKKLQNETGARVQFVQMREDDP----SDRRCMLSGSPDQVQEARARIEELI 113
IK+LQ TG ++ +Q D P +D+ ++G P +VQ+AR + E+I
Sbjct: 184 TIKQLQERTGVKMVMIQ---DGPLPTGADKPLRITGDPFKVQQAREMVLEII 232
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R C+L+G+P+ +++A+ +
Sbjct: 84 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIP-ERPCVLTGTPESIEQAKRLLG 142
Query: 111 ELID 114
+++D
Sbjct: 143 QIVD 146
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ--MREDDPSDRRCM 94
GG+ E+T+ VP G+VIGKGG+ IK + ++GA V+ + DP+ R
Sbjct: 352 GGIQEITY-----TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPSTDPNLRMFT 406
Query: 95 LSGSPDQVQEARARIEELI 113
+ G P Q++ AR I+E +
Sbjct: 407 IRGIPQQIEVARHLIDEKV 425
>gi|147902659|ref|NP_001083916.1| RNA-binding protein VgRBP71 [Xenopus laevis]
gi|25992561|gb|AAN77160.1| RNA-binding protein VgRBP71 [Xenopus laevis]
gi|213625145|gb|AAI69923.1| RNA-binding protein VgRBP71 [Xenopus laevis]
Length = 672
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/70 (45%), Positives = 46/70 (65%), Gaps = 1/70 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I V VP+ +VGVVIG+ GDMIKK+QN+ G R+QF Q P D+ + G PD+ + A
Sbjct: 279 IDVPVPRHSVGVVIGRSGDMIKKIQNDAGVRIQFKQDDGTGP-DKIAHIMGPPDRCEHAA 337
Query: 107 ARIEELIDSV 116
+ I +L+ S+
Sbjct: 338 SIISDLLQSL 347
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q E+G +VQ P +R L+G+PD VQ+A+ ++
Sbjct: 100 VPDGMVGLIIGRGGEQINKIQQESGCKVQISPDSGGMP-ERIVSLTGNPDAVQKAKMLLD 158
Query: 111 ELI 113
+++
Sbjct: 159 DIV 161
Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 56/106 (52%), Gaps = 12/106 (11%)
Query: 24 GNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ- 82
G +F+++ +G+ G + ++ +P G++IGKGG+ IK+LQ G ++ +Q
Sbjct: 167 GPPSQFHDSSNGQNGSLQ------EIMIPAGKAGLIIGKGGETIKQLQERAGVKMILIQD 220
Query: 83 MREDDPSDRRCMLSGSPDQVQEARARIEELIDSVMVEQFSGANFDK 128
++ D+ + G P +VQ+A + +L+ ++ NFD+
Sbjct: 221 GSQNTNMDKPLRIVGEPFKVQQACEMVMDLL-----KERDQPNFDR 261
Score = 43.5 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
+P G+VIG+GG+ +K + +TGA V+ + DP+ + ++ G+P Q+ A+
Sbjct: 384 IPTHKCGLVIGRGGENVKAINQQTGAFVEISRQPPPNGDPNFKMFIIRGNPQQIDHAKQL 443
Query: 109 IEELID 114
IEE I+
Sbjct: 444 IEEKIE 449
>gi|351695446|gb|EHA98364.1| Far upstream element-binding protein 3 [Heterocephalus glaber]
Length = 490
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
I+V VP+ AVG+VIG+ G+MIKK+QN+ G R+QF + DD +R + G PD+ Q
Sbjct: 243 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQF---KPDDGVSPERAAQVMGPPDRCQH 299
Query: 105 ARARIEELI 113
A I ELI
Sbjct: 300 AAHIINELI 308
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 17/112 (15%)
Query: 6 FQQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGD 65
+Q++R +G+ D N F+ + DG + E+ +P + VG+VIGKGG+
Sbjct: 121 IEQAKRL---LGQIVDRCRNGPGFHNDVDGNNTIQEI-------LIPASKVGLVIGKGGE 170
Query: 66 MIKKLQNETGARVQFVQMREDDP----SDRRCMLSGSPDQVQEARARIEELI 113
IK+LQ TG ++ +Q D P +D+ ++G P +VQ+AR + E+I
Sbjct: 171 TIKQLQERTGVKMVMIQ---DGPLPTGADKPLRITGDPFKVQQAREMVLEII 219
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R C+L+G+P+ +++A+ +
Sbjct: 71 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIP-ERPCVLTGTPESIEQAKRLLG 129
Query: 111 ELID 114
+++D
Sbjct: 130 QIVD 133
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ--MREDDPSDRRCM 94
GG+ E+T+ VP G+VIGKGG+ IK + ++GA V+ + DPS R
Sbjct: 339 GGVQEITY-----TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPSLRIFT 393
Query: 95 LSGSPDQVQEARARIEELI 113
+ G P Q++ AR I+E +
Sbjct: 394 IRGVPQQIEVARHLIDEKV 412
>gi|441623750|ref|XP_004088935.1| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 3 [Nomascus leucogenys]
Length = 847
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
I+V VP+ AVG+VIG+ G+MIKK+QN+ G R+QF + DD +R + G PD+ Q
Sbjct: 361 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQF---KPDDGISPERAAQVMGPPDRCQH 417
Query: 105 ARARIEELI 113
A I ELI
Sbjct: 418 AAHIISELI 426
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R C+L+G+P+ +++A+ +
Sbjct: 189 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIP-ERPCVLTGTPESIEQAKRLLG 247
Query: 111 ELID 114
+++D
Sbjct: 248 QIVD 251
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ--MREDDPSDRRCM 94
GG+ E+T+ V P G+VIGKGG+ IK + ++GA V+ + DP+ RR
Sbjct: 457 GGVQEITYTV-----PADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFT 511
Query: 95 LSGSPDQVQEARARIEELI 113
+ G P Q++ AR I+E +
Sbjct: 512 IRGVPQQIEVARQLIDEKV 530
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 7/109 (6%)
Query: 23 FGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ 82
G + + NG G + + ++ +P + VG+VIG+GG+ IK+LQ TG ++ +Q
Sbjct: 246 LGQIVDRCRNGPGFHNDIDSNSTIQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQ 305
Query: 83 MREDDP----SDRRCMLSGSPDQVQEARARIEELIDSVMVEQFSGANFD 127
D P +D+ ++G +VQ+AR + E+I F G D
Sbjct: 306 ---DGPLPTGADKPLRITGDAFKVQQAREMVLEIIREKEQADFRGVRGD 351
>gi|124054230|gb|ABM89317.1| FUBP3 [Pongo pygmaeus]
Length = 150
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
I+V VP+ AVG+VIG+ G+MIKK+QN+ G R+QF + DD +R + G PD+ Q
Sbjct: 34 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQF---KPDDGISPERAAQVMGPPDRCQH 90
Query: 105 ARARIEELI 113
A I ELI
Sbjct: 91 AAHIISELI 99
>gi|167535308|ref|XP_001749328.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772194|gb|EDQ85849.1| predicted protein [Monosiga brevicollis MX1]
Length = 689
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+++ VP A VG +IG+GG+ I +LQN++G+R+Q Q + R C L+G PD VQ A+
Sbjct: 98 VEMTVPGAHVGRIIGRGGETINRLQNQSGSRIQVAQ--DLGQPMRPCTLTGVPDSVQRAK 155
Query: 107 ARIEELIDSVM 117
IEE++ M
Sbjct: 156 VLIEEIVREHM 166
Score = 43.1 bits (100), Expect = 0.037, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRR-CMLSGSPDQVQ 103
+++ VP A G VIG+GG+ I++++ +TG R+QF Q P+D R L+G+ D ++
Sbjct: 302 LKIEVPGVAAGRVIGRGGETIRRIEADTGCRIQFDQADGVGLGPNDARIATLTGNQDAIE 361
Query: 104 EARARIEELI 113
A I +I
Sbjct: 362 AAEQAIVGII 371
Score = 42.7 bits (99), Expect = 0.043, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 34 DGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDR 91
DG G E + VP G +IG+GG+ I +Q +GAR++ VQ +DP ++R
Sbjct: 198 DGDGADPNANAETETMMVPAERAGFLIGRGGETINMIQTRSGARLKMVQ---EDPHAAER 254
Query: 92 RCMLSGSPDQVQEARARIEELI 113
+ G + ++ AR + +L+
Sbjct: 255 LLYMMGDAEAIKRARELVADLL 276
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ +P G +IGKGG+ I+ +Q++TG ++ + E +++ ++ G+PDQ++ +
Sbjct: 394 IAIPAERAGFIIGKGGETIRSIQDQTGVHLELDRNSEAG-NEKIFIIRGNPDQIEHCKMV 452
Query: 109 IEELI 113
I +++
Sbjct: 453 IRDML 457
>gi|326930374|ref|XP_003211322.1| PREDICTED: far upstream element-binding protein 3-like [Meleagris
gallopavo]
Length = 554
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
I+V VP+ AVG+VIG+ G+MIKK+QN+ G R+QF + DD +R + G PD+ Q
Sbjct: 242 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQF---KPDDGISPERVAQVMGLPDRCQH 298
Query: 105 ARARIEELI 113
A I ELI
Sbjct: 299 AAHIISELI 307
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R C+L+G+P+ +++A+ +
Sbjct: 70 VPDKMVGFIIGRGGEQISRIQIESGCKIQIAPDSGGMP-ERPCVLTGTPESIEQAKRLLG 128
Query: 111 ELID 114
+++D
Sbjct: 129 QIVD 132
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 44/70 (62%), Gaps = 7/70 (10%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP----SDRRCMLSGSPDQVQ 103
++ +P + VG+VIGKGG+ IK+LQ TG ++ +Q D P +D+ ++G +VQ
Sbjct: 152 EILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQ---DGPMPTGADKPLRITGDAFKVQ 208
Query: 104 EARARIEELI 113
+AR + E+I
Sbjct: 209 QAREMVLEII 218
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ--MREDDPSDRRCM 94
GGM E+T+ VP G+VIGKGG+ IK + ++GA V+ + DP R
Sbjct: 338 GGMQEITY-----TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPGVRIFT 392
Query: 95 LSGSPDQVQEARARIEELI 113
+ G P Q++ AR I+E +
Sbjct: 393 IRGVPQQIELARHLIDEKV 411
>gi|417411544|gb|JAA52203.1| Putative k-logy type rna binding protein, partial [Desmodus
rotundus]
Length = 544
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
++V VP+ AVG+VIG+ G+MIKK+QN+ G R+QF + DD +R + G PD+ Q
Sbjct: 228 LEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQF---KPDDGISPERAAQVMGPPDRCQH 284
Query: 105 ARARIEELI 113
A I ELI
Sbjct: 285 AAHVINELI 293
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 7/100 (7%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--- 88
NG G + + V +V +P + VG+VIGKGG+ IK+LQ TG ++ +Q D P
Sbjct: 122 NGPGFHNDVDGSSTVQEVLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQ---DGPLPT 178
Query: 89 -SDRRCMLSGSPDQVQEARARIEELIDSVMVEQFSGANFD 127
+D+ ++G P +VQ+AR + E+I F GA D
Sbjct: 179 GADKPLRMTGDPFKVQQAREMVLEIIREKDQADFRGARGD 218
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R C+L+G+P+ ++ A+ +
Sbjct: 56 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIP-ERPCVLTGTPESIELAKRLLG 114
Query: 111 ELID 114
+++D
Sbjct: 115 QIVD 118
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ--MREDDPSDRRCM 94
GG+ E+T+ VP G+VIGKGG+ IK + ++GA V+ + DPS R
Sbjct: 324 GGIQEITY-----TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPSLRIFT 378
Query: 95 LSGSPDQVQEARARIEELI 113
+ G P Q++ AR I+E +
Sbjct: 379 IRGIPQQIEVARHLIDEKV 397
>gi|350529339|ref|NP_001121330.2| KH-type splicing regulatory protein precursor [Xenopus laevis]
Length = 732
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I V VP+ +VGVVIG+ GDMIKK+QN+ G R+QF Q P D+ + G PD+ + A
Sbjct: 335 IDVPVPRHSVGVVIGRSGDMIKKIQNDAGVRIQFKQDDGTGP-DKIAHIMGPPDRCEHAA 393
Query: 107 ARIEELIDSV 116
I +L+ S+
Sbjct: 394 RIIGDLLQSL 403
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q E+G +VQ P +R L+GSPD VQ A+ ++
Sbjct: 158 VPDGMVGLIIGRGGEQINKIQQESGCKVQISPDSGGMP-ERVVSLTGSPDAVQNAKMLLD 216
Query: 111 ELI 113
+++
Sbjct: 217 DIV 219
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 59/106 (55%), Gaps = 12/106 (11%)
Query: 24 GNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ- 82
G +F+++ +G+ G + ++ +P G++IGKGG+ IK+LQ G ++ +Q
Sbjct: 225 GPPSQFHDSSNGQNGSLQ------EIMIPAGKAGLIIGKGGETIKQLQERAGVKMILIQD 278
Query: 83 MREDDPSDRRCMLSGSPDQVQEARARIEELIDSVMVEQFSGANFDK 128
++ D+ + G P +VQ+A E ++D ++++ ANFD+
Sbjct: 279 GSQNTNMDKPLRIVGEPFKVQQA---CEMVMD--LLKERDQANFDR 319
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 50 CVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCMLSGSPDQVQEARA 107
+P G+VIG+GG+ +K + +TGA V+ + DP+ + + G+P Q+ A+
Sbjct: 439 SIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQPPPNGDPNFKMFTIRGNPQQIDHAKQ 498
Query: 108 RIEELID 114
IEE I+
Sbjct: 499 LIEEKIE 505
>gi|341899632|gb|EGT55567.1| hypothetical protein CAEBREN_19643 [Caenorhabditis brenneri]
Length = 592
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 49/75 (65%), Gaps = 4/75 (5%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS-DRRC-MLSGSPDQVQEA 105
+V VP+++VG++IGK GD IK+L ETG ++QF +DDPS RC ++ G+ DQ+ A
Sbjct: 237 EVVVPRSSVGIIIGKQGDTIKRLAMETGTKIQF--KPDDDPSTPERCAIIMGTRDQIYRA 294
Query: 106 RARIEELIDSVMVEQ 120
RI EL+ +Q
Sbjct: 295 TERITELVKKSASQQ 309
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
+P+ +VG+VIGKGG I+ +Q + G RVQ D+ +R L G+ V++A+ I
Sbjct: 57 IPETSVGIVIGKGGSEIQGIQAKAGCRVQM-SSDSDNSGNRMVTLEGARCNVEQAKILIN 115
Query: 111 ELI 113
E++
Sbjct: 116 EVV 118
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 16/69 (23%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM-LSGSPDQVQE 104
+ + +P G++IGK G+ I++LQ ++G ++ VQ + + + ++G P +++
Sbjct: 136 TVDILIPPNRCGLIIGKSGETIRQLQEKSGCKMILVQENQSVSDQAKPLRITGDPQKIEH 195
Query: 105 ARARIEELI 113
A+ + E++
Sbjct: 196 AKQLVSEIL 204
Score = 38.5 bits (88), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRC-MLSGSPDQVQEARA 107
+ VP A G+VIGKGG+ IK++ +E+GA + RE +D + ++ G Q++ A+
Sbjct: 330 MSVPAAKCGLVIGKGGETIKQINSESGAHCEL--NREATGTDEKVFIIKGGKRQIEHAKH 387
Query: 108 RI 109
I
Sbjct: 388 LI 389
>gi|324518607|gb|ADY47153.1| Far upstream element-binding protein 1, partial [Ascaris suum]
Length = 384
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 56/91 (61%), Gaps = 4/91 (4%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
+V VP+A+VG++IGKGG+ IK+L E+GA++QF + DR ++ G+ +Q+ +A
Sbjct: 12 EVIVPRASVGMIIGKGGETIKRLAAESGAKIQFKPDEDQTTPDRCAVIQGTTEQIAKATQ 71
Query: 108 RIEELIDSVMVEQFSGANFDKLRSTVLANRS 138
I EL++ + +G+ + V AN++
Sbjct: 72 FISELVN----KSGAGSGAEIFYMHVPANKT 98
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 6/80 (7%)
Query: 30 NENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS 89
N++G G G E+ + VP G+VIGKGG+ IK++ E+GA V+ + +
Sbjct: 78 NKSGAGSGA------EIFYMHVPANKTGLVIGKGGETIKQICAESGAHVELSREPPPNSY 131
Query: 90 DRRCMLSGSPDQVQEARARI 109
++ ++ G+P Q+ A+ I
Sbjct: 132 EKVFIIKGTPYQIHHAQHII 151
>gi|194225936|ref|XP_001499355.2| PREDICTED: far upstream element-binding protein 3 [Equus caballus]
Length = 573
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
++V VP+ AVG+VIG+ G+MIKK+QN+ G R+QF + DD +R + G PD+ Q
Sbjct: 257 LEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQF---KPDDGISPERAAQVMGPPDRCQH 313
Query: 105 ARARIEELI 113
A I ELI
Sbjct: 314 AAHVINELI 322
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 17/112 (15%)
Query: 6 FQQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGD 65
+Q++R +G+ D N F+ + DG + E+ +P + VG+VIGKGG+
Sbjct: 135 IEQAKRL---LGQIVDRCRNGPGFHNDVDGSSTIQEL-------LIPASKVGLVIGKGGE 184
Query: 66 MIKKLQNETGARVQFVQMREDDP----SDRRCMLSGSPDQVQEARARIEELI 113
IK+LQ TG ++ +Q D P +D+ ++G P +VQ+AR + E+I
Sbjct: 185 TIKQLQERTGVKMVMIQ---DGPLPTGADKPLRITGDPFKVQQAREMVLEII 233
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R C+L+G+P+ +++A+ +
Sbjct: 85 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIP-ERPCVLTGTPESIEQAKRLLG 143
Query: 111 ELID 114
+++D
Sbjct: 144 QIVD 147
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ--MREDDPSDRRCM 94
GG+ E+T+ VP G+VIGKGG+ IK + ++GA V+ + DP+ R
Sbjct: 353 GGVQEITY-----TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFT 407
Query: 95 LSGSPDQVQEARARIEELI 113
+ G P Q++ AR I+E +
Sbjct: 408 IRGIPQQIEVARHLIDEKV 426
>gi|345564985|gb|EGX47941.1| hypothetical protein AOL_s00081g268 [Arthrobotrys oligospora ATCC
24927]
Length = 691
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ VP AVG++IGKGG+ IK++QN TG R+ + + D +R LSG PD + A+A
Sbjct: 523 IRVPIDAVGMIIGKGGETIKEMQNTTGCRINVLSQQTSD-GEREISLSGPPDAIARAKAA 581
Query: 109 IEELIDSV 116
I+E +D+
Sbjct: 582 IDEKVDTA 589
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 56 VGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELI 113
VG++IG+ G+ +K+++ +GARVQFV +P +R C ++G VQ AR +I+ +I
Sbjct: 244 VGLIIGRRGETLKRVEEMSGARVQFVADSRGEP-ERVCNITGPRAAVQSARQQIQTII 300
Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+Q+ VP VG++IG+ G+ I+ LQ+ +G + V + R L G+ + A+
Sbjct: 400 MQIMVPDKTVGLIIGRRGETIQDLQDRSGCHINIVGESKSVNGFRPVNLIGTTEAAMRAK 459
Query: 107 ARIEELIDS 115
A I E+++S
Sbjct: 460 ALIMEIVES 468
>gi|334349275|ref|XP_003342183.1| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 1-like [Monodelphis domestica]
Length = 676
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/71 (45%), Positives = 48/71 (67%), Gaps = 5/71 (7%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEA 105
+V +P+ AVG+VIG+ G+MIKK+QN+ G R+QF + DD + DR ++G PD+ Q A
Sbjct: 259 KVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQF---KPDDGTTPDRIAQITGPPDRCQHA 315
Query: 106 RARIEELIDSV 116
I +L+ SV
Sbjct: 316 AEIITDLLRSV 326
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R CML+G+P+ VQ A+ ++
Sbjct: 103 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP-ERSCMLTGTPESVQSAKRLLD 161
Query: 111 ELID 114
++++
Sbjct: 162 QIVE 165
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
VP G++IGKGG+ IK + ++GAR++ + DP+ + + G+P Q+ AR
Sbjct: 363 VPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQL 422
Query: 109 IEELI 113
IEE I
Sbjct: 423 IEEKI 427
Score = 43.9 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 13/86 (15%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--- 88
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q D P
Sbjct: 175 HGDGPGN------AVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQ---DGPQNT 225
Query: 89 -SDRRCMLSGSPDQVQEARARIEELI 113
+D+ ++G P +VQ ++ I +I
Sbjct: 226 GADKPLRITGDPYKVQVSQQLILRII 251
>gi|156375798|ref|XP_001630266.1| predicted protein [Nematostella vectensis]
gi|156217283|gb|EDO38203.1| predicted protein [Nematostella vectensis]
Length = 688
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 48/73 (65%), Gaps = 3/73 (4%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQ 103
+++ VP+ VG VIGKGG+ IK++Q E+GARVQF + D+P SDR + GS +Q+Q
Sbjct: 345 TLEIPVPRDVVGFVIGKGGETIKRIQAESGARVQFNPAK-DNPNSSDRMATVQGSQEQIQ 403
Query: 104 EARARIEELIDSV 116
+ I E+I V
Sbjct: 404 KVEKIINEIISQV 416
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 36 RGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED---DPSDRR 92
R G+ +T E +V +P VG+VIG+GG+ I KLQ+ETGAR+Q P DR
Sbjct: 150 RAGLGSMTTE--EVKIPNKYVGLVIGRGGEQINKLQSETGARIQVAPDPPAGMMSPPDRS 207
Query: 93 CMLSGSPDQVQEAR 106
+ G+ V++A+
Sbjct: 208 VTIGGTVQAVEKAK 221
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ 82
+VI++ +P + VG++IGKGG+ IK LQ R+ VQ
Sbjct: 248 QVIEMMIPASKVGLIIGKGGETIKNLQERAQCRMVMVQ 285
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSDRRCMLSGSPDQVQE 104
+++ VP G++IGKGG+ IK++ +GA V+ + + E++P+ + ++ G+ Q+Q+
Sbjct: 438 TLEMPVPGNKCGLIIGKGGETIKQIIAVSGAHVELNRNVPENNPT-KFFVIRGTDQQIQQ 496
Query: 105 ARARIEELI 113
A I E I
Sbjct: 497 AEKMINEKI 505
>gi|268573738|ref|XP_002641846.1| Hypothetical protein CBG16520 [Caenorhabditis briggsae]
Length = 563
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 46/70 (65%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
+V VP+ + G++IGKGG+MIK+L ETG ++QF + DR ++ G+ DQ+ +A
Sbjct: 235 EVIVPRLSAGMIIGKGGEMIKRLAMETGTKIQFKPDVNPNSEDRVAVIMGTRDQIYQATE 294
Query: 108 RIEELIDSVM 117
RI E+++ M
Sbjct: 295 RITEIVNRAM 304
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 40/74 (54%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP+ VG+VIGKGG I+ +Q +G RVQ R C + G PDQV AR I
Sbjct: 52 VPEKVVGLVIGKGGSEIRLIQQTSGCRVQMDPDHASMNGIRNCTIEGLPDQVAIARQMIT 111
Query: 111 ELIDSVMVEQFSGA 124
++I+ + SGA
Sbjct: 112 QVINRNQSDAPSGA 125
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 3/88 (3%)
Query: 26 MREFNENGDGRGGMWEVTW--EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM 83
M+ G G G + V V + VP G+VIGKGG+ IK+++ ETGA
Sbjct: 304 MKNNGAPGSGTGSVASVMPGQTVFYLHVPSGKCGLVIGKGGENIKQIERETGATCGLAPA 363
Query: 84 REDDPSDRRCM-LSGSPDQVQEARARIE 110
E + + + G+P QV A ++
Sbjct: 364 AEQKNEEEKVFEIKGTPFQVHHASHLVK 391
>gi|341896366|gb|EGT52301.1| hypothetical protein CAEBREN_06932 [Caenorhabditis brenneri]
Length = 538
Score = 60.5 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 46/70 (65%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
+V VP+ + G++IGKGG+MIK+L ETG ++QF + + DR ++ GS +Q+ A
Sbjct: 232 EVIVPRLSAGMIIGKGGEMIKRLAQETGTKIQFKPDSDPNSEDRIAVIVGSREQIYRATE 291
Query: 108 RIEELIDSVM 117
RI E+++ +
Sbjct: 292 RITEIVNKAI 301
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/67 (43%), Positives = 41/67 (61%), Gaps = 6/67 (8%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSD---RRCMLSGSPDQVQEARA 107
VP+ VG+VIGKGG I+ +Q + R VQM DD S+ R C + G+PDQV A+
Sbjct: 60 VPEKMVGLVIGKGGTEIRLIQQTSACR---VQMDADDQSNDGIRNCTIEGTPDQVAIAKQ 116
Query: 108 RIEELID 114
I ++I+
Sbjct: 117 MITQVIN 123
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 46/80 (57%), Gaps = 9/80 (11%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGAR----VQFVQMREDDPSDRRCMLS 96
EVT +++ +P +G+VIGKGG+ I+ +Q ++G R VQ P R +S
Sbjct: 137 EVTEDIL---IPSDKIGLVIGKGGETIRTVQEQSGLRTCNVVQDSTSATGQPKPLR--MS 191
Query: 97 GSPDQVQEARARIEELIDSV 116
G+P V+ A+A + +++++
Sbjct: 192 GTPTAVETAKALVTNIMNNI 211
Score = 35.0 bits (79), Expect = 9.9, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM-LSGSPDQVQ 103
++ + VP + G+VIGKGG+ IK+++ +TGA E D + + G+ Q+
Sbjct: 312 QIFYLHVPASKCGLVIGKGGENIKQIERDTGATCGLAGPAEQKNDDEKVFEIKGTQFQIH 371
Query: 104 EA 105
A
Sbjct: 372 HA 373
>gi|351695694|gb|EHA98612.1| Far upstream element-binding protein 1 [Heterocephalus glaber]
Length = 359
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 55/96 (57%), Gaps = 11/96 (11%)
Query: 24 GNMREF-NENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ 82
G RE NE G GG E + V +P+ AVGVVIG+ G+MIKK+QN+ G R+QF
Sbjct: 260 GGFREVRNEYGSRIGG-----NEGVDVPIPRFAVGVVIGRNGEMIKKIQNDAGVRIQF-- 312
Query: 83 MREDD--PSDRRCMLSGSPDQVQEARARIEELIDSV 116
+ DD DR ++ PD+ Q A I +L+ SV
Sbjct: 313 -KPDDGTTPDRIAQITRPPDRCQHAAEIITDLLQSV 347
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
P VG +IG+GG+ I ++Q E+G ++Q P +R CML+G+P+ VQ A+ ++
Sbjct: 108 APDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP-ERSCMLTGTPESVQSAKQLLD 166
Query: 111 ELID 114
++++
Sbjct: 167 QIVE 170
Score = 41.6 bits (96), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 13/87 (14%)
Query: 31 ENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP-- 88
+GDG G + I + V KA G+VIGKG + IK+LQ G + +Q D P
Sbjct: 179 HHGDGPGN----AVQEIMISVNKA--GLVIGKGRETIKQLQERAGVKTVMIQ---DGPQN 229
Query: 89 --SDRRCMLSGSPDQVQEARARIEELI 113
+D+ ++G P +VQ+A+ + ELI
Sbjct: 230 TGADKPLRITGEPYKVQQAKEMVLELI 256
>gi|348536136|ref|XP_003455553.1| PREDICTED: far upstream element-binding protein 3 [Oreochromis
niloticus]
Length = 556
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 46/72 (63%), Gaps = 5/72 (6%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
+ V VP+ AVG+VIG+ G+MIKK+QN+ G R+QF + DD +R M+ G PD+ Q
Sbjct: 258 LDVPVPRFAVGIVIGRNGEMIKKIQNDAGVRIQF---KADDGISLERVAMVMGQPDRCQH 314
Query: 105 ARARIEELIDSV 116
A I ELI +
Sbjct: 315 AVHLINELIQTA 326
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 50/86 (58%), Gaps = 12/86 (13%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--- 88
+GDG GG V ++ +P + VG+VIG+GGD IK+LQ G ++ +Q D P
Sbjct: 158 HGDGEGGA-----SVQEMLIPASKVGLVIGRGGDTIKQLQERAGVKMMMIQ---DGPMPT 209
Query: 89 -SDRRCMLSGSPDQVQEARARIEELI 113
+D+ +SG P +VQ AR + E+I
Sbjct: 210 GADKPLRISGDPYKVQAARELVLEVI 235
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q + +R C L+G+P+ +++A+ +
Sbjct: 87 VPDRMVGFIIGRGGEQITRIQLESGCKIQ-IAPEGGGLMERPCSLTGTPESIEQAKRLLA 145
Query: 111 ELID 114
+++D
Sbjct: 146 QIVD 149
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ--MREDDPSDRRCM 94
G + EVT+ +P G+VIGKGG+ IK + ++GA V+ + DP+ R
Sbjct: 353 GPVQEVTY-----TIPADKCGLVIGKGGETIKSINQQSGAHVELQRNPPPSTDPNTRVFT 407
Query: 95 LSGSPDQVQEARARIEELIDSVMVEQFSGANFDKLRSTVLANRS 138
+ G+ Q+ AR I++ I + G F A+++
Sbjct: 408 IRGTAQQMDLARQLIDDKIGGSGIMSNGGFGFSPFTQGPAAHQN 451
>gi|74208425|dbj|BAE26399.1| unnamed protein product [Mus musculus]
Length = 575
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
I+V VP+ VG+VIG+ G+MIKK+QN+ G R+QF + DD +R + G PD+ Q
Sbjct: 256 IEVSVPRFVVGIVIGRNGEMIKKIQNDAGVRIQF---KPDDGISPERAAQVMGPPDRCQH 312
Query: 105 ARARIEELI 113
A I ELI
Sbjct: 313 AAPIINELI 321
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 17/112 (15%)
Query: 6 FQQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGD 65
+Q++R +G+ D N F+ + DG + E+ +P + VG+VIGKGG+
Sbjct: 134 IEQAKRL---LGQIVDRCRNGPGFHNDMDGNSTIQEL-------LIPASKVGLVIGKGGE 183
Query: 66 MIKKLQNETGARVQFVQMREDDP----SDRRCMLSGSPDQVQEARARIEELI 113
IK+LQ TG ++ +Q D P +D+ ++G P +VQ+AR + E+I
Sbjct: 184 TIKQLQERTGVKMVMIQ---DGPLPTGADKPLRITGDPFKVQQAREMVLEII 232
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R C+L+G+P+ +++A+ +
Sbjct: 84 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIP-ERPCVLTGTPESIEQAKRLLG 142
Query: 111 ELID 114
+++D
Sbjct: 143 QIVD 146
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ--MREDDPSDRRCM 94
GG+ E+T+ VP G+VIGKGG+ IK + ++GA V+ + DP+ R
Sbjct: 352 GGVQEITY-----TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFT 406
Query: 95 LSGSPDQVQEARARIEELI 113
+ G+P Q++ AR I+E +
Sbjct: 407 IRGAPQQMEVARHLIDEKV 425
>gi|57525224|ref|NP_001006199.1| far upstream element-binding protein 3 [Gallus gallus]
gi|53127676|emb|CAG31167.1| hypothetical protein RCJMB04_2o21 [Gallus gallus]
Length = 539
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
I+V VP+ AVG+VIG+ G+MIKK+QN+ G R+QF + DD +R + G PD+ Q
Sbjct: 274 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQF---KPDDGISPERVAQVMGLPDRCQH 330
Query: 105 ARARIEELI 113
A I ELI
Sbjct: 331 AAHIISELI 339
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R C+L+G+P+ +++A+ +
Sbjct: 102 VPDKMVGFIIGRGGEQISRIQIESGCKIQIAPDSGGMP-ERPCVLTGTPESIEQAKRLLG 160
Query: 111 ELID 114
+++D
Sbjct: 161 QIVD 164
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 17/112 (15%)
Query: 6 FQQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGD 65
+Q++R +G+ D N F+ + DG + E+ +P + VG+VIGKGG+
Sbjct: 152 IEQAKRL---LGQIVDRCRNGPGFHNDVDGNSTIQEI-------LIPASKVGLVIGKGGE 201
Query: 66 MIKKLQNETGARVQFVQMREDDP----SDRRCMLSGSPDQVQEARARIEELI 113
IK+LQ TG ++ +Q D P +D+ ++G +VQ+AR + E+I
Sbjct: 202 TIKQLQERTGVKMIMIQ---DGPMPTGADKPLRITGDAFKVQQAREMVLEII 250
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ--MREDDPSDRRCM 94
GGM E+T+ VP G+VIGKGG+ IK + ++GA V+ + DP R
Sbjct: 370 GGMQEITY-----TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPGVRIFT 424
Query: 95 LSGSPDQVQEARARIEELI 113
+ G P Q++ AR I+E +
Sbjct: 425 IRGVPQQIELARHLIDEKV 443
>gi|345306114|ref|XP_001507404.2| PREDICTED: far upstream element-binding protein 3 [Ornithorhynchus
anatinus]
Length = 590
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
I+V VP+ AVG+VIG+ G+MIKK+QN+ G R+QF + DD +R + G PD+ Q
Sbjct: 275 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQF---KPDDGISPERVAQVMGLPDRCQH 331
Query: 105 ARARIEELI 113
A I ELI
Sbjct: 332 AAHIINELI 340
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 7/84 (8%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP----SDRRCMLSGSPDQVQ 103
++ +P + VG+VIGKGG+ IK+LQ TG ++ +Q D P +D+ ++G P +VQ
Sbjct: 185 EILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQ---DGPLPTGADKPLRITGEPFKVQ 241
Query: 104 EARARIEELIDSVMVEQFSGANFD 127
+AR + E+I F G D
Sbjct: 242 QAREMVLEIIREKDQADFRGVRSD 265
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ--MREDDPSDRRCM 94
GGM E+T+ VP G+VIGKGG+ IK + ++GA V+ + DPS R
Sbjct: 371 GGMQEITY-----TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPSVRIFT 425
Query: 95 LSGSPDQVQEARARIEELI 113
+ G P Q++ AR I+E +
Sbjct: 426 IRGVPQQIELARHLIDEKV 444
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R C+L+G+P+ +++A+ +
Sbjct: 103 VPDKMVGFIIGRGGEQISRIQAESGCKIQIAPDSGGMP-ERPCVLTGTPESIEQAKRLLG 161
Query: 111 ELID 114
+++D
Sbjct: 162 QIVD 165
>gi|308465473|ref|XP_003094996.1| hypothetical protein CRE_23697 [Caenorhabditis remanei]
gi|308246261|gb|EFO90213.1| hypothetical protein CRE_23697 [Caenorhabditis remanei]
Length = 580
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 48/77 (62%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
+V VP+ + G++IGKGG+MIK+L ETG ++QF + DR ++ G+ DQ+ A
Sbjct: 243 EVIVPRVSAGMIIGKGGEMIKRLAMETGTKIQFKPDANPNSEDRVAVIMGTRDQIYRATE 302
Query: 108 RIEELIDSVMVEQFSGA 124
RI E+++ + +G+
Sbjct: 303 RITEIVNRAIKNGQAGS 319
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Query: 27 REFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED 86
++ +E GD G + E+ QV P+ VG+VIGKGG I+ +Q +G RVQ +
Sbjct: 37 KKTSEIGDLNMGDTDKIIEIYQV--PEKVVGLVIGKGGSEIRLIQQTSGCRVQMDPDHQS 94
Query: 87 DPSDRRCMLSGSPDQVQEARARIEELIDSVMVEQFSG 123
R C + G PDQV A+ I + V+ +G
Sbjct: 95 VNGIRNCTIEGPPDQVAIAKQMITQCFFQVISRNQTG 131
Score = 42.7 bits (99), Expect = 0.050, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 9/79 (11%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGAR----VQFVQMREDDPSDRRCMLS 96
EVT E++ +P +G+VIGKGGD I+ LQ+++G R VQ P R +
Sbjct: 140 EVTEEML---IPADKIGLVIGKGGDTIRTLQDQSGLRLLNVVQDSSSATGQPKPLR--MV 194
Query: 97 GSPDQVQEARARIEELIDS 115
G+P ++ A+A + +++S
Sbjct: 195 GTPAAIETAKALVHNIMNS 213
Score = 35.4 bits (80), Expect = 7.7, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM-LSGSPDQVQEA---- 105
VP G+VIGKGG+ IK+++ ++GA E D + + G+ Q+ A
Sbjct: 338 VPATKCGLVIGKGGENIKQIERDSGASCGLAAASEQKNEDEKVFEIKGTQYQIHHASHLV 397
Query: 106 RARIEELIDSVMVEQFSGANFDK 128
+ ++ E+ + V G+ + +
Sbjct: 398 KIKVGEIAPNTPVPPLPGSGYQQ 420
>gi|71997383|ref|NP_001023000.1| Protein ZK418.9, isoform a [Caenorhabditis elegans]
gi|373218578|emb|CCD61629.1| Protein ZK418.9, isoform a [Caenorhabditis elegans]
Length = 557
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
+V VP+ + G++IGKGG+MIK+L ETG ++QF + DR ++ G+ DQ+ A
Sbjct: 243 EVIVPRLSAGMIIGKGGEMIKRLAAETGTKIQFKPDTNPNSEDRIAVIMGTRDQIYRATE 302
Query: 108 RIEELIDSVMVEQFSGANFDKLRS-TVLANRS 138
RI E+++ + + +GA D+ + TVL +S
Sbjct: 303 RITEIVNRAI--KNNGAPQDRGSAGTVLPGQS 332
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 37/64 (57%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP+ VG+VIGKGG I+ +Q +G RVQ + R C + G PDQV AR I
Sbjct: 60 VPEKVVGLVIGKGGSEIRLIQQTSGCRVQMDPDHQSVNGFRNCTIEGPPDQVAVARQMIT 119
Query: 111 ELID 114
++I+
Sbjct: 120 QVIN 123
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 9/80 (11%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGAR----VQFVQMREDDPSDRRCMLS 96
EVT E++ +P +G+VIGKGG+ I+ +Q ++G R VQ P R +
Sbjct: 137 EVTEEML---IPADKIGLVIGKGGETIRIVQEQSGLRNCNVVQETTTATGQPKPLRMI-- 191
Query: 97 GSPDQVQEARARIEELIDSV 116
GSP ++ A+A + ++++
Sbjct: 192 GSPAAIETAKALVHNIMNNT 211
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 5/92 (5%)
Query: 35 GRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM 94
G G + + VP G+VIGKGG+ IK+++ ETGA E D +
Sbjct: 322 GSAGTVLPGQSIFYMHVPAGKCGLVIGKGGENIKQIERETGATCGLAPAAEQKNEDEKVF 381
Query: 95 -LSGSPDQVQEA----RARIEELIDSVMVEQF 121
+ GS Q+ A R ++ E+ + V
Sbjct: 382 EIKGSQLQIHHASHLVRIKVGEISPNTPVPPL 413
>gi|71997385|ref|NP_001023001.1| Protein ZK418.9, isoform b [Caenorhabditis elegans]
gi|373218579|emb|CCD61630.1| Protein ZK418.9, isoform b [Caenorhabditis elegans]
Length = 510
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 57/92 (61%), Gaps = 3/92 (3%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
+V VP+ + G++IGKGG+MIK+L ETG ++QF + DR ++ G+ DQ+ A
Sbjct: 196 EVIVPRLSAGMIIGKGGEMIKRLAAETGTKIQFKPDTNPNSEDRIAVIMGTRDQIYRATE 255
Query: 108 RIEELIDSVMVEQFSGANFDKLRS-TVLANRS 138
RI E+++ + + +GA D+ + TVL +S
Sbjct: 256 RITEIVNRAI--KNNGAPQDRGSAGTVLPGQS 285
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 37/64 (57%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP+ VG+VIGKGG I+ +Q +G RVQ + R C + G PDQV AR I
Sbjct: 13 VPEKVVGLVIGKGGSEIRLIQQTSGCRVQMDPDHQSVNGFRNCTIEGPPDQVAVARQMIT 72
Query: 111 ELID 114
++I+
Sbjct: 73 QVIN 76
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 9/80 (11%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGAR----VQFVQMREDDPSDRRCMLS 96
EVT E++ +P +G+VIGKGG+ I+ +Q ++G R VQ P R +
Sbjct: 90 EVTEEML---IPADKIGLVIGKGGETIRIVQEQSGLRNCNVVQETTTATGQPKPLRMI-- 144
Query: 97 GSPDQVQEARARIEELIDSV 116
GSP ++ A+A + ++++
Sbjct: 145 GSPAAIETAKALVHNIMNNT 164
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 5/92 (5%)
Query: 35 GRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM 94
G G + + VP G+VIGKGG+ IK+++ ETGA E D +
Sbjct: 275 GSAGTVLPGQSIFYMHVPAGKCGLVIGKGGENIKQIERETGATCGLAPAAEQKNEDEKVF 334
Query: 95 -LSGSPDQVQEA----RARIEELIDSVMVEQF 121
+ GS Q+ A R ++ E+ + V
Sbjct: 335 EIKGSQLQIHHASHLVRIKVGEISPNTPVPPL 366
>gi|432876388|ref|XP_004073024.1| PREDICTED: far upstream element-binding protein 3-like [Oryzias
latipes]
Length = 634
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 46/72 (63%), Gaps = 5/72 (6%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
+ V VP+ AVG+VIG+ G+MIKK+QN+ G R+QF + DD +R M+ G PD+ Q
Sbjct: 253 LDVPVPRFAVGIVIGRNGEMIKKIQNDAGVRIQF---KTDDGISPERVAMVMGQPDRCQH 309
Query: 105 ARARIEELIDSV 116
A I +LI +
Sbjct: 310 AVHLINDLIQTA 321
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 7/86 (8%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--- 88
NG G G E V ++ +P + VG+VIG+GGD IK+LQ G ++ +Q D P
Sbjct: 148 NGPGFHGDSEGGTSVQEMLIPASKVGLVIGRGGDTIKQLQERAGVKMMMIQ---DGPMPT 204
Query: 89 -SDRRCMLSGSPDQVQEARARIEELI 113
+D+ +SG P +VQ AR + E+I
Sbjct: 205 GADKPLRISGDPYKVQAARELVLEVI 230
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q + +R C L+GSP+ +++A+ +
Sbjct: 82 VPDRMVGFIIGRGGEQITRIQLESGCKIQ-IAADSGGLMERPCSLTGSPESIEQAKRLLV 140
Query: 111 ELID 114
++++
Sbjct: 141 QIVE 144
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ--MREDDPSDRRCM 94
G + EVT+ +P G+VIGKGG+ IK + ++GA V+ + DP+ R
Sbjct: 348 GPLQEVTY-----TIPADKCGLVIGKGGETIKSINQQSGAHVELQRNPPPSTDPNTRVFT 402
Query: 95 LSGSPDQVQEARARIEE 111
+ G+ Q++ AR I++
Sbjct: 403 IRGTAQQMEVARQLIDD 419
>gi|324511113|gb|ADY44637.1| Far upstream element-binding protein 1, partial [Ascaris suum]
Length = 581
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 56/91 (61%), Gaps = 4/91 (4%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
+V VP+A+VG++IGKGG+ IK+L E+GA++QF + DR ++ G+ +Q+ +A
Sbjct: 229 EVIVPRASVGMIIGKGGETIKRLAAESGAKIQFKPDEDQTTPDRCAVIQGTTEQIAKATQ 288
Query: 108 RIEELIDSVMVEQFSGANFDKLRSTVLANRS 138
I EL++ + +G+ + V AN++
Sbjct: 289 FISELVN----KSGAGSGAEIFYMHVPANKT 315
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSDRRCML 95
GG ++T E++ +P A G+VIGKGG+ IK +Q + G ++ +Q +E + +
Sbjct: 121 GGGRQITHEML---IPGAKCGLVIGKGGETIKNIQEQAGVKMVMIQETQESGGQPKPLRI 177
Query: 96 SGSPDQVQEARARIEELIDS 115
G PD+V AR +E+++ S
Sbjct: 178 IGEPDKVDTARRMVEDILQS 197
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLS 96
GG +V E I+V P VG+VIG+GG+ I ++Q+++ RVQ + D + R+C L
Sbjct: 28 GGAGDVLIETIEV--PDHCVGLVIGRGGEQISQIQSQSNCRVQ-MSPESDGNNMRQCTLQ 84
Query: 97 GSPDQVQEARARIEELI 113
G+ V+ A++ I+++I
Sbjct: 85 GTKMAVERAKSMIQDVI 101
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 44/80 (55%), Gaps = 6/80 (7%)
Query: 30 NENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS 89
N++G G G E+ + VP G+VIGKGG+ IK++ E+GA V+ + +
Sbjct: 295 NKSGAGSGA------EIFYMHVPANKTGLVIGKGGETIKQICAESGAHVELSREPPPNSY 348
Query: 90 DRRCMLSGSPDQVQEARARI 109
++ ++ G+P Q+ A+ I
Sbjct: 349 EKVFIIKGTPYQIHHAQHII 368
>gi|148229383|ref|NP_001090529.1| far upstream element (FUSE) binding protein 1 [Xenopus laevis]
gi|25992563|gb|AAN77161.1| FUSE binding protein-like protein [Xenopus laevis]
Length = 610
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P DR CML+GSPD VQEA+ ++
Sbjct: 95 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGMP-DRSCMLTGSPDSVQEAKMLLD 153
Query: 111 ELID 114
++++
Sbjct: 154 QIVE 157
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 11/96 (11%)
Query: 24 GNMREF-NENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ 82
G RE NE G GG E I AVG+VIG+ G+MIKK+QN+ G R+QF
Sbjct: 247 GGFREVRNEYGSRIGGN-----EGIDFLYHDVAVGIVIGRNGEMIKKIQNDAGVRIQF-- 299
Query: 83 MREDDPS--DRRCMLSGSPDQVQEARARIEELIDSV 116
+ DD S +R ++G D+ Q A + +L+ SV
Sbjct: 300 -KPDDGSTPERVAQITGPQDRCQHAAEIVNDLLRSV 334
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%), Gaps = 7/72 (9%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP----SDRRCMLSGSPDQ 101
V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q D P +D+ ++G P +
Sbjct: 175 VQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQ---DGPQNTGADKPLRIAGDPYK 231
Query: 102 VQEARARIEELI 113
VQ+A+ + ELI
Sbjct: 232 VQQAKEMVLELI 243
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCM 94
GG+ E + VP G++IGKGG+ IK + ++GAR++ + DP+ +
Sbjct: 362 GGLQEFNF-----VVPSVKTGLIIGKGGETIKNISQQSGARIELQRNPPPNADPNVKLFT 416
Query: 95 LSGSPDQVQEARARIEELI 113
+ GSP Q+ AR +EE I
Sbjct: 417 IRGSPQQIDYARQLVEEKI 435
>gi|324500869|gb|ADY40396.1| Far upstream element-binding protein 1 [Ascaris suum]
Length = 581
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 56/91 (61%), Gaps = 4/91 (4%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
+V VP+A+VG++IGKGG+ IK+L E+GA++QF + DR ++ G+ +Q+ +A
Sbjct: 229 EVIVPRASVGMIIGKGGETIKRLAAESGAKIQFKPDEDQTTPDRCAVIQGTTEQIAKATQ 288
Query: 108 RIEELIDSVMVEQFSGANFDKLRSTVLANRS 138
I EL++ + +G+ + V AN++
Sbjct: 289 FISELVN----KSGAGSGAEIFYMHVPANKT 315
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSDRRCML 95
GG ++T E++ +P A G+VIGKGG+ IK +Q + G ++ +Q +E + +
Sbjct: 121 GGGRQITHEML---IPGAKCGLVIGKGGETIKNIQEQAGVKMVMIQETQESGGQPKPLRI 177
Query: 96 SGSPDQVQEARARIEELIDS 115
G PD+V AR +E+++ S
Sbjct: 178 IGEPDKVDTARRMVEDILQS 197
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Query: 30 NENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS 89
N++G G G E+ + VP G+VIGKGG+ IK++ E+GA V+ + + S
Sbjct: 295 NKSGAGSGA------EIFYMHVPANKTGLVIGKGGETIKQICAESGAHVELSRDPPPNSS 348
Query: 90 DRRCMLSGSPDQVQEARARI 109
++ ++ G+P Q+ A+ I
Sbjct: 349 EKVFIIKGTPYQIHHAQHII 368
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLS 96
GG +V E I+V P VG+VIG+GG+ I ++Q+++ RVQ + D + R+C L
Sbjct: 28 GGAGDVLIETIEV--PDHCVGLVIGRGGEQISQIQSQSNCRVQ-MSPESDGNNMRQCTLQ 84
Query: 97 GSPDQVQEARARIEELI 113
G+ V+ A++ I+++I
Sbjct: 85 GTKMAVERAKSMIQDVI 101
>gi|147898765|ref|NP_001090218.1| far upstream element (FUSE) binding protein 1 [Xenopus laevis]
gi|47718038|gb|AAH70981.1| MGC78835 protein [Xenopus laevis]
gi|213626654|gb|AAI69815.1| Hypothetical protein MGC78835 [Xenopus laevis]
Length = 653
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P DR CML+GSPD VQEA+ ++
Sbjct: 95 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGMP-DRSCMLTGSPDSVQEAKMLLD 153
Query: 111 ELID 114
++++
Sbjct: 154 QIVE 157
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 56/96 (58%), Gaps = 11/96 (11%)
Query: 24 GNMREF-NENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ 82
G RE NE G GG E I V +P+ AVG+VIG+ G+MIKK+QN+ G R+QF
Sbjct: 247 GGFREVRNEYGSRIGGN-----EGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQF-- 299
Query: 83 MREDDPS--DRRCMLSGSPDQVQEARARIEELIDSV 116
+ DD S +R ++G D+ Q A + +L+ SV
Sbjct: 300 -KPDDGSTPERVAQITGPQDRCQHAAEIVNDLLRSV 334
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%), Gaps = 7/72 (9%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP----SDRRCMLSGSPDQ 101
V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q D P +D+ ++G P +
Sbjct: 175 VQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQ---DGPQNTGADKPLRIAGDPYK 231
Query: 102 VQEARARIEELI 113
VQ+A+ + ELI
Sbjct: 232 VQQAKEMVLELI 243
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCM 94
GG+ E + VP G++IGKGG+ IK + ++GAR++ + DP+ +
Sbjct: 362 GGLQEFNF-----VVPSVKTGLIIGKGGETIKNISQQSGARIELQRNPPPNADPNVKLFT 416
Query: 95 LSGSPDQVQEARARIEELI 113
+ GSP Q+ AR +EE I
Sbjct: 417 IRGSPQQIDYARQLVEEKI 435
>gi|86129564|ref|NP_001034426.1| far upstream element-binding protein 3 [Rattus norvegicus]
gi|75270299|gb|ABA18725.1| MAP2 RNA trans-acting protein 2 [Rattus norvegicus]
Length = 569
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
I+V VP+ VG+VIG+ G+MIKK+QN TG R+QF + DD +R + G PD+ Q
Sbjct: 256 IEVSVPRFVVGIVIGRNGEMIKKIQNGTGVRIQF---KPDDGISPERAAQVMGPPDRCQH 312
Query: 105 ARARIEELI 113
A I ELI
Sbjct: 313 AARIINELI 321
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 17/112 (15%)
Query: 6 FQQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGD 65
+Q++R +G+ D N F+ + DG + E+ +P + VG+VIGKGG+
Sbjct: 134 IEQAKRL---LGQIVDRCRNGPGFHNDIDGNSTIQEL-------LIPASKVGLVIGKGGE 183
Query: 66 MIKKLQNETGARVQFVQMREDDP----SDRRCMLSGSPDQVQEARARIEELI 113
IK+LQ TG ++ +Q D P +D+ ++G P +VQ+AR + E+I
Sbjct: 184 TIKQLQERTGVKMVMIQ---DGPLPTGADKPLRITGDPFKVQQAREMVLEII 232
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R C+L+G+P+ +++A+ +
Sbjct: 84 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIP-ERPCVLTGTPESIEQAKRLLG 142
Query: 111 ELID 114
+++D
Sbjct: 143 QIVD 146
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ--MREDDPSDRRCM 94
GG+ E+T+ VP G+VIGKGG+ IK + ++GA V+ + DP+ R
Sbjct: 352 GGIQEITY-----TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFT 406
Query: 95 LSGSPDQVQEARARIEELI 113
+ G+P Q++ AR I+E +
Sbjct: 407 IRGAPQQIEVARHLIDEKV 425
>gi|348546081|ref|XP_003460507.1| PREDICTED: far upstream element-binding protein 3-like, partial
[Oreochromis niloticus]
Length = 181
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 5/71 (7%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
+ V VP+ AVG+VIG+ G+MIKK+QN+ G R+QF + DD +R M+ G PD+ Q
Sbjct: 66 LDVPVPRFAVGIVIGRNGEMIKKIQNDAGVRIQF---KADDGISLERVAMVMGQPDRCQH 122
Query: 105 ARARIEELIDS 115
A I ELI +
Sbjct: 123 AVHLINELIQT 133
>gi|324512087|gb|ADY45016.1| Far upstream element-binding protein 1, partial [Ascaris suum]
Length = 515
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 45/66 (68%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
+V VP+A+VG++IGKGG+ IK+L E+GA++QF + DR ++ G+ +Q+ +A
Sbjct: 227 EVIVPRASVGMIIGKGGETIKRLAAESGAKIQFKPDEDQTTPDRCAVIQGTTEQIAKATQ 286
Query: 108 RIEELI 113
I ELI
Sbjct: 287 FISELI 292
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSD 90
+G GG ++T E++ +P A G+VIGKGG+ IK +Q + G ++ +Q +E
Sbjct: 114 DGGMSGGGRQITHEML---IPGAKCGLVIGKGGETIKNIQEQAGVKMVMIQETQESGGQP 170
Query: 91 RRCMLSGSPDQVQEARARIEELIDS 115
+ + G PD+V AR +E+++ S
Sbjct: 171 KPLRIIGEPDKVDTARRMVEDILQS 195
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLS 96
GG +V E I+V P VG+VIG+GG+ I ++Q+++ RVQ D + R+C L
Sbjct: 26 GGAGDVLIETIEV--PDHCVGLVIGRGGEQISQIQSQSNCRVQM-SPESDGNNMRQCTLQ 82
Query: 97 GSPDQVQEARARIEELI 113
G+ V+ A++ I+++I
Sbjct: 83 GTKMAVERAKSMIQDVI 99
Score = 42.4 bits (98), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEA 105
+ + VP G+VIGKGG+ IK++ E+GA V+ + + ++ ++ G+P Q+ A
Sbjct: 292 IFYMHVPANKTGLVIGKGGETIKQICAESGAHVELSREPPPNSYEKVFIIKGTPYQIHHA 351
Query: 106 RARI 109
+ I
Sbjct: 352 QHII 355
>gi|149039051|gb|EDL93271.1| rCG45587 [Rattus norvegicus]
Length = 569
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
I+V VP+ VG+VIG+ G+MIKK+QN+ G R+QF + DD +R + G PD+ Q
Sbjct: 256 IEVSVPRFVVGIVIGRNGEMIKKIQNDAGVRIQF---KPDDGISPERAAQVMGPPDRCQH 312
Query: 105 ARARIEELI 113
A I ELI
Sbjct: 313 AARIINELI 321
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 17/112 (15%)
Query: 6 FQQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGD 65
+Q++R +G+ D N F+ + DG + E+ +P + VG+VIGKGG+
Sbjct: 134 IEQAKRL---LGQIVDRCRNGPGFHNDIDGNSTIQEL-------LIPASKVGLVIGKGGE 183
Query: 66 MIKKLQNETGARVQFVQMREDDP----SDRRCMLSGSPDQVQEARARIEELI 113
IK+LQ TG ++ +Q D P +D+ ++G P +VQ+AR + E+I
Sbjct: 184 TIKQLQERTGVKMVMIQ---DGPLPTGADKPLRITGDPFKVQQAREMVLEII 232
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R C+L+G+P+ +++A+ +
Sbjct: 84 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIP-ERPCVLTGTPESIEQAKRLLG 142
Query: 111 ELID 114
+++D
Sbjct: 143 QIVD 146
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ--MREDDPSDRRCM 94
GG+ E+T+ VP G+VIGKGG+ IK + ++GA V+ + DP+ R
Sbjct: 352 GGIQEITY-----TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFT 406
Query: 95 LSGSPDQVQEARARIEELI 113
+ G+P Q++ AR I+E +
Sbjct: 407 IRGAPQQIEVARHLIDEKV 425
>gi|171847306|gb|AAI61696.1| LOC100158419 protein [Xenopus laevis]
Length = 674
Score = 58.9 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 32/70 (45%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I V VP+ +VGVVIG+ GDMIKK+QN+ G R+QF Q P D+ + G PD+ + A
Sbjct: 277 IDVPVPRHSVGVVIGRSGDMIKKIQNDAGVRIQFKQDDGTGP-DKIAHIMGPPDRCEHAA 335
Query: 107 ARIEELIDSV 116
I +L+ S+
Sbjct: 336 RIIGDLLQSL 345
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q E+G +VQ P +R L+GSPD VQ A+ ++
Sbjct: 100 VPDGMVGLIIGRGGEQINKIQQESGCKVQISPDSGGMP-ERVVSLTGSPDAVQNAKMLLD 158
Query: 111 ELI 113
+++
Sbjct: 159 DIV 161
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 57/106 (53%), Gaps = 12/106 (11%)
Query: 24 GNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ- 82
G +F+++ +G+ G + ++ +P G++IGKGG+ IK+LQ G ++ +Q
Sbjct: 167 GPPSQFHDSSNGQNGSLQ------EIMIPAGKAGLIIGKGGETIKQLQERAGVKMILIQD 220
Query: 83 MREDDPSDRRCMLSGSPDQVQEARARIEELIDSVMVEQFSGANFDK 128
++ D+ + G P +VQ+A + +L+ ++ ANFD+
Sbjct: 221 GSQNTNMDKPLRIVGEPFKVQQACEMVMDLL-----KERDQANFDR 261
Score = 42.7 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
+P G+VIG+GG+ +K + +TGA V+ + DP+ + + G+P Q+ A+
Sbjct: 382 IPTHKCGLVIGRGGENVKAINQQTGAFVEISRQPPPNGDPNFKMFTIRGNPQQIDHAKQL 441
Query: 109 IEELID 114
IEE I+
Sbjct: 442 IEEKIE 447
>gi|147899778|ref|NP_001083390.1| far upstream element (FUSE) binding protein 3 [Xenopus laevis]
gi|38014650|gb|AAH60400.1| MGC68532 protein [Xenopus laevis]
Length = 546
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
++V VP+ AVG++IG+ G+MIKK+QN+ G R+QF + DD +R + G PD+ Q
Sbjct: 257 VEVSVPRFAVGIIIGRNGEMIKKIQNDAGVRIQF---KPDDGLSPERVAQVMGLPDRCQH 313
Query: 105 ARARIEELI 113
A I ELI
Sbjct: 314 AAHIINELI 322
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 7/86 (8%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--- 88
NG G + + V ++ +P + VG+VIGKGG+ IK+LQ TG ++ +Q D P
Sbjct: 151 NGPGFHNDMDGSSTVQEILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQ---DGPLPT 207
Query: 89 -SDRRCMLSGSPDQVQEARARIEELI 113
+D+ ++G P +VQ+AR + E+I
Sbjct: 208 GADKPLRITGDPFKVQQARDLVLEII 233
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R C+L+G+P+ +++A+ +
Sbjct: 85 VPDKMVGFIIGRGGEQISRIQAESGCKIQIAPDSGGMP-ERPCVLTGTPESIEQAKRLLG 143
Query: 111 ELID 114
+++D
Sbjct: 144 QIVD 147
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 10/125 (8%)
Query: 21 DNFGNMREFNENGDGRGGMWEVT----WEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGA 76
D FG + G RG W ++ + I VP G+VIGKGG+ IK + ++GA
Sbjct: 329 DGFGGLSLARGRGRSRGD-WNLSTPGSMQEINYTVPADKCGLVIGKGGENIKNINQQSGA 387
Query: 77 RVQFVQ--MREDDPSDRRCMLSGSPDQVQEARARIEELIDSVMV---EQFSGANFDKLRS 131
V+ + DP+ R + G P Q++ AR I+E + + F + F + +
Sbjct: 388 HVELQRNPPPNTDPAVRIFTIRGVPQQIELARHLIDEKVGGTTIGGPSSFGQSAFSQAHA 447
Query: 132 TVLAN 136
T N
Sbjct: 448 TPHQN 452
>gi|224922832|ref|NP_001028561.2| far upstream element (FUSE) binding protein 3 [Mus musculus]
gi|74198475|dbj|BAE39720.1| unnamed protein product [Mus musculus]
Length = 575
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
I+V VP+ VG+VIG+ G+MIKK+QN+ G R+QF + DD +R + G PD+ Q
Sbjct: 256 IEVSVPRFVVGIVIGRNGEMIKKIQNDAGVRIQF---KPDDGISPERAAQVMGPPDRCQH 312
Query: 105 ARARIEELI 113
A I ELI
Sbjct: 313 AARIINELI 321
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 17/112 (15%)
Query: 6 FQQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGD 65
+Q++R +G+ D N F+ + DG + E+ +P + VG+VIGKGG+
Sbjct: 134 IEQAKRL---LGQIVDRCRNGPGFHNDMDGNSTIQEL-------LIPASKVGLVIGKGGE 183
Query: 66 MIKKLQNETGARVQFVQMREDDP----SDRRCMLSGSPDQVQEARARIEELI 113
IK+LQ TG ++ +Q D P +D+ ++G P +VQ+AR + E+I
Sbjct: 184 TIKQLQERTGVKMVMIQ---DGPLPTGADKPLRITGDPFKVQQAREMVLEII 232
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R C+L+G+P+ +++A+ +
Sbjct: 84 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIP-ERPCVLTGTPESIEQAKRLLG 142
Query: 111 ELID 114
+++D
Sbjct: 143 QIVD 146
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ--MREDDPSDRRCM 94
GG+ E+T+ VP G+VIGKGG+ IK + ++GA V+ + DP+ R
Sbjct: 352 GGVQEITY-----TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFT 406
Query: 95 LSGSPDQVQEARARIEELI 113
+ G+P Q++ AR I+E +
Sbjct: 407 IRGAPQQMEVARHLIDEKV 425
>gi|148676563|gb|EDL08510.1| mCG130458 [Mus musculus]
Length = 569
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
I+V VP+ VG+VIG+ G+MIKK+QN+ G R+QF + DD +R + G PD+ Q
Sbjct: 256 IEVSVPRFVVGIVIGRNGEMIKKIQNDAGVRIQF---KPDDGISPERAAQVMGPPDRCQH 312
Query: 105 ARARIEELI 113
A I ELI
Sbjct: 313 AARIINELI 321
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 61/112 (54%), Gaps = 17/112 (15%)
Query: 6 FQQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGD 65
+Q++R +G+ D N F+ + DG + E+ +P + VG+VIGKGG+
Sbjct: 134 IEQAKRL---LGQIVDRCRNGPGFHNDMDGNSTIQEL-------LIPASKVGLVIGKGGE 183
Query: 66 MIKKLQNETGARVQFVQMREDDP----SDRRCMLSGSPDQVQEARARIEELI 113
IK+LQ TG ++ +Q D P +D+ ++G P +VQ+AR + E+I
Sbjct: 184 TIKQLQERTGVKMVMIQ---DGPLPTGADKPLRITGDPFKVQQAREMVLEII 232
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R C+L+G+P+ +++A+ +
Sbjct: 84 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIP-ERPCVLTGTPESIEQAKRLLG 142
Query: 111 ELID 114
+++D
Sbjct: 143 QIVD 146
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ--MREDDPSDRRCM 94
GG+ E+T+ VP G+VIGKGG+ IK + ++GA V+ + DP+ R
Sbjct: 352 GGVQEITY-----TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTDPNLRIFT 406
Query: 95 LSGSPDQVQEARARIEELI 113
+ G+P Q++ AR I+E +
Sbjct: 407 IRGAPQQMEVARHLIDEKV 425
>gi|345320294|ref|XP_001520726.2| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 2-like, partial [Ornithorhynchus anatinus]
Length = 652
Score = 58.9 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 42/110 (38%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ+ I R D G E NE G GG I V VP+ +VGVVIG+ G+M
Sbjct: 214 QQACEMVMDILRERDQ-GGFGERNEYGSRIGGG-------IDVPVPRHSVGVVIGRSGEM 265
Query: 67 IKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+QN+ G R+QF Q P ++ + G PD+ + A I +L+ S+
Sbjct: 266 IKKIQNDAGVRIQFKQDDGTGP-EKIAHIMGPPDRCEHAARIINDLLQSL 314
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
+P G+VIG+GG+ +K + +TGA V+ + DP+ + ++ GSP Q+ A+
Sbjct: 352 IPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQL 411
Query: 109 IEELID 114
IEE I+
Sbjct: 412 IEEKIE 417
Score = 37.4 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Query: 30 NENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDP 88
N NG G + E+ +P G+VIGKGG+ IK+LQ G ++ +Q ++
Sbjct: 147 NANGGQNGTVQEIM-------IPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTN 199
Query: 89 SDRRCMLSGSPDQVQEA 105
D+ + G +VQ+A
Sbjct: 200 VDKPLRIIGDHYKVQQA 216
>gi|45361433|ref|NP_989293.1| far upstream element (FUSE) binding protein 1 [Xenopus (Silurana)
tropicalis]
gi|39794540|gb|AAH63902.1| far upstream element (FUSE) binding protein 1 [Xenopus (Silurana)
tropicalis]
Length = 653
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 56/96 (58%), Gaps = 11/96 (11%)
Query: 24 GNMREF-NENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ 82
G RE NE G GG E I V +P+ AVG+VIG+ G+MIKK+QN+ G R+QF
Sbjct: 247 GGFREIRNEYGSRIGGN-----EGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQF-- 299
Query: 83 MREDDPS--DRRCMLSGSPDQVQEARARIEELIDSV 116
+ DD S +R ++G D+ Q A I +L+ SV
Sbjct: 300 -KPDDGSTPERIAQITGPQDRCQHAAEIINDLLRSV 334
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P DR CML+GSPD VQ A+ ++
Sbjct: 95 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGMP-DRSCMLTGSPDSVQAAKRLLD 153
Query: 111 ELID 114
++++
Sbjct: 154 QIVE 157
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%), Gaps = 7/72 (9%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP----SDRRCMLSGSPDQ 101
V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q D P +D+ ++G P +
Sbjct: 175 VQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQ---DGPQNTGADKPLRIAGDPYK 231
Query: 102 VQEARARIEELI 113
VQ+A+ + ELI
Sbjct: 232 VQQAKEMVLELI 243
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCM 94
GG+ E + VP G++IGKGG+ IK + ++GAR++ + DP+ +
Sbjct: 362 GGLQEFNF-----VVPTVKTGLIIGKGGETIKNISQQSGARIELQRNPPPNADPNVKLFT 416
Query: 95 LSGSPDQVQEARARIEELI 113
+ GSP Q+ AR +EE I
Sbjct: 417 IRGSPQQIDYARQLVEEKI 435
>gi|449450341|ref|XP_004142921.1| PREDICTED: uncharacterized protein LOC101216803 [Cucumis sativus]
gi|449494409|ref|XP_004159539.1| PREDICTED: uncharacterized LOC101216803 [Cucumis sativus]
Length = 694
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 32/80 (40%), Positives = 51/80 (63%), Gaps = 6/80 (7%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQEA 105
++ +P VGV+IGKGG+ IK LQ ++GA++Q + + DP + R L G+PDQ+
Sbjct: 138 KIEIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSTTRMVELMGTPDQI--- 194
Query: 106 RARIEELIDSVMVEQFSGAN 125
A+ E+LI+ V+ E SG +
Sbjct: 195 -AKAEQLINDVLSEAESGGS 213
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMR---EDDPSDRRCMLSGSPDQVQEARA 107
+P VG+VIGKGG+ IK +Q TGAR+Q + + D ++R + GS +Q++ A+
Sbjct: 233 IPNNKVGLVIGKGGETIKSMQARTGARIQVIPLHLPPGDTSTERTLQIDGSSEQIESAKQ 292
Query: 108 RIEELI 113
+ E+I
Sbjct: 293 LVNEVI 298
>gi|397497276|ref|XP_003846118.1| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 2 [Pan paniscus]
Length = 738
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ+ I R D G + NE G GG I V VP+ +VGVVIG+ G+M
Sbjct: 319 QQACEMVMDILRERDQ-GGFGDRNEYGSRIGGG-------IDVPVPRHSVGVVIGRSGEM 370
Query: 67 IKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+QN+ G R+QF Q P ++ + G PD+ + A I +L+ S+
Sbjct: 371 IKKIQNDAGVRIQFKQDDGTGP-EKIAHIMGPPDRCEHAARIINDLLQSL 419
Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q ++G +VQ P +R L+G+P+ VQ+A+ ++
Sbjct: 177 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-ERSVSLTGAPESVQKAKMMLD 235
Query: 111 ELI 113
+++
Sbjct: 236 DIV 238
Score = 45.1 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
+P G+VIG+GG+ +K + +TGA V+ + DP+ + ++ GSP Q+ A+
Sbjct: 457 IPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQL 516
Query: 109 IEELID 114
IEE I+
Sbjct: 517 IEEKIE 522
Score = 42.0 bits (97), Expect = 0.081, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 30 NENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDP 88
N NG G + E+ +P G+VIGKGG+ IK+LQ G ++ +Q ++
Sbjct: 252 NANGGQNGTVQEIM-------IPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTN 304
Query: 89 SDRRCMLSGSPDQVQEARARIEELIDSVMVEQFSGANFDK 128
D+ + G P +VQ+A E++ ++ E+ G D+
Sbjct: 305 VDKPLRIIGDPYKVQQAC----EMVMDILRERDQGGFGDR 340
>gi|183396881|gb|AAI66022.1| Khsrp protein [synthetic construct]
Length = 542
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ+ I R D G + NE G GG I V VP+ +VGVVIG+ G+M
Sbjct: 88 QQACEMVMDILRERDQ-GGFGDRNEYGSRVGGG-------IDVPVPRHSVGVVIGRSGEM 139
Query: 67 IKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+QN+ G R+QF Q P ++ + G PD+ + A I +L+ S+
Sbjct: 140 IKKIQNDAGVRIQFKQDDGTGP-EKIAHIMGPPDRCEHAARIINDLLQSL 188
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
+P G+VIG+GG+ +K + +TGA V+ + DP+ + ++ GSP Q+ A+
Sbjct: 226 IPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFVIRGSPQQIDHAKQL 285
Query: 109 IEELID 114
IEE I+
Sbjct: 286 IEEKIE 291
Score = 42.0 bits (97), Expect = 0.091, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 30 NENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDP 88
N NG G + E+ +P G+VIGKGG+ IK+LQ G ++ +Q ++
Sbjct: 21 NANGGQNGTVQEIM-------IPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTN 73
Query: 89 SDRRCMLSGSPDQVQEARARIEELIDSVMVEQFSGANFDK 128
D+ + G P +VQ+A E++ ++ E+ G D+
Sbjct: 74 VDKPLRIIGDPYKVQQAC----EMVMDILRERDQGGFGDR 109
>gi|148232337|ref|NP_001090834.1| far upstream element (FUSE) binding protein 3 [Xenopus (Silurana)
tropicalis]
gi|134023819|gb|AAI35377.1| fubp3 protein [Xenopus (Silurana) tropicalis]
Length = 546
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
++V VP+ AVG++IG+ G+MIKK+QN+ G R+QF + DD +R + G PD Q
Sbjct: 257 VEVSVPRFAVGIIIGRNGEMIKKIQNDAGVRIQF---KPDDGISPERAAQVMGLPDLCQH 313
Query: 105 ARARIEELI 113
A I ELI
Sbjct: 314 AAHIINELI 322
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 46/72 (63%), Gaps = 7/72 (9%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP----SDRRCMLSGSPDQ 101
V ++ +P + VG+VIGKGG+ IK+LQ TG ++ +Q D P +D+ ++G P +
Sbjct: 165 VQEILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQ---DGPLPTGADKPLRITGDPFK 221
Query: 102 VQEARARIEELI 113
VQ+AR + E+I
Sbjct: 222 VQQARDLVLEII 233
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R C+L+G+P+ +++A+ +
Sbjct: 85 VPDKMVGFIIGRGGEQISRIQTESGCKIQIAPDSGGMP-ERPCVLTGTPESIEQAKRLLG 143
Query: 111 ELID 114
+++D
Sbjct: 144 QIVD 147
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 10/105 (9%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ--MREDDPSDRRCM 94
G M E+T+ VP G+VIGKGG+ IK + ++GA V+ + DP R
Sbjct: 353 GSMQEITY-----TVPADKCGLVIGKGGENIKNINQQSGAHVELQRNPPPNTDPGVRIFT 407
Query: 95 LSGSPDQVQEARARIEELIDSVMV---EQFSGANFDKLRSTVLAN 136
+ G P Q++ AR I+E + + F + F + +T N
Sbjct: 408 IRGVPQQIELARHLIDEKVGGPTIGGPSSFGQSAFSQAHATPHQN 452
>gi|82697008|gb|AAI08415.1| Khsrp protein, partial [Mus musculus]
Length = 551
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ+ I R D G + NE G GG I V VP+ +VGVVIG+ G+M
Sbjct: 97 QQACEMVMDILRERDQ-GGFGDRNEYGSRVGGG-------IDVPVPRHSVGVVIGRSGEM 148
Query: 67 IKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+QN+ G R+QF Q P ++ + G PD+ + A I +L+ S+
Sbjct: 149 IKKIQNDAGVRIQFKQDDGTGP-EKIAHIMGPPDRCEHAARIINDLLQSL 197
Score = 44.7 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
+P G+VIG+GG+ +K + +TGA V+ + DP+ + ++ GSP Q+ A+
Sbjct: 235 IPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFVIRGSPQQIDHAKQL 294
Query: 109 IEELID 114
IEE I+
Sbjct: 295 IEEKIE 300
Score = 41.6 bits (96), Expect = 0.096, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 30 NENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDP 88
N NG G + E+ +P G+VIGKGG+ IK+LQ G ++ +Q ++
Sbjct: 30 NANGGQNGTVQEIM-------IPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTN 82
Query: 89 SDRRCMLSGSPDQVQEARARIEELIDSVMVEQFSGANFDK 128
D+ + G P +VQ+A E++ ++ E+ G D+
Sbjct: 83 VDKPLRIIGDPYKVQQAC----EMVMDILRERDQGGFGDR 118
>gi|410917265|ref|XP_003972107.1| PREDICTED: far upstream element-binding protein 2-like [Takifugu
rubripes]
Length = 635
Score = 58.5 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/66 (42%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
+ VP A VG++IG+GG+ I K+Q E+G +VQF P +RR L+G PD +Q A+A
Sbjct: 104 ECSVPDAMVGLIIGRGGEQINKIQQESGCKVQFAHDTAGLP-ERRVSLTGPPDAIQRAKA 162
Query: 108 RIEELI 113
I++++
Sbjct: 163 LIDDIV 168
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 48/72 (66%), Gaps = 5/72 (6%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEARAR 108
VP+ +VGVVIG+ G+MIKK+Q++ G ++QF + DD + ++ ++ G PD+ + A +
Sbjct: 281 VPRHSVGVVIGRNGEMIKKIQSDAGVKIQF---KPDDGTGPEKMALIMGPPDRCEHAASI 337
Query: 109 IEELIDSVMVEQ 120
I +L+ SV +
Sbjct: 338 ITDLLQSVRARE 349
Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS-DRRCMLSGSPDQVQEAR 106
++ +P G++IG+GG+ IK+LQ G ++ +Q P+ D+ + G P +VQ+A+
Sbjct: 184 EMIIPAGKAGLIIGRGGETIKQLQERAGVKMILIQDGSQPPNIDKPLRIIGDPYKVQQAK 243
Query: 107 ARIEELI 113
+ E++
Sbjct: 244 EMVNEIL 250
Score = 43.1 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
VP G+VIG+GG+ +K + +TGA V+ DP+ + + G+P Q+ A+
Sbjct: 384 VPAHKCGLVIGRGGENVKSINQQTGAFVKMTHQPPPNGDPNFKLFTIRGTPQQIDHAKQL 443
Query: 109 IEELIDS 115
IEE I++
Sbjct: 444 IEEKIEA 450
>gi|268558150|ref|XP_002637065.1| Hypothetical protein CBG09562 [Caenorhabditis briggsae]
Length = 590
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
+V VP+++VG++IGK GD IK+L ETG ++QF + + +R ++ G+ DQ+ A
Sbjct: 231 EVVVPRSSVGIIIGKQGDTIKRLAMETGTKIQFKPDEDPNAPERCAIIMGTRDQIYRATE 290
Query: 108 RIEELI 113
RI EL+
Sbjct: 291 RITELV 296
Score = 42.0 bits (97), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
+P++AVG+VIG+GG I+ +Q + G RVQ D+ R+ L G+ V+ A+ I
Sbjct: 57 IPESAVGIVIGRGGSEIQGIQAKAGCRVQM-SSDSDNSGVRQVTLEGTRANVEAAKVLIN 115
Query: 111 ELI 113
E++
Sbjct: 116 EVV 118
Score = 38.5 bits (88), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 36/61 (59%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ VP A G+VIGKGG+ IK++ +E+GA + + + ++ ++ G Q++ A+
Sbjct: 320 MSVPAAKCGLVIGKGGETIKQINSESGAHCELSRDATGNVEEKVFVIKGGKRQIEHAKHL 379
Query: 109 I 109
I
Sbjct: 380 I 380
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM-LSGSPDQVQE 104
I + +P G++IGK G+ I++LQ ++G ++ VQ + + + ++G P +++
Sbjct: 136 TIDIAIPPNRCGLIIGKAGETIRQLQEKSGCKMVLVQDSQTVGDQAKPLRITGDPQKIEI 195
Query: 105 ARARIEELID 114
A+ + E+++
Sbjct: 196 AKQLVAEILN 205
>gi|357481253|ref|XP_003610912.1| Far upstream element-binding protein [Medicago truncatula]
gi|355512247|gb|AES93870.1| Far upstream element-binding protein [Medicago truncatula]
Length = 807
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM---REDDPSDRRCMLSGSPDQVQ 103
IQ+ VP VG++IGKGG+ IK LQ +TGAR+Q + DD +R ++G Q++
Sbjct: 283 IQIQVPNEKVGLIIGKGGETIKSLQTKTGARIQLIPQHLPEGDDSKERTVQVTGDKRQIE 342
Query: 104 EARARIEELIDSV 116
A+ I+E++ +
Sbjct: 343 IAQEMIKEVLSQI 355
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 48/80 (60%), Gaps = 6/80 (7%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQEA 105
++ VP VGV+IGK GD I+ LQ +GA++Q + + DP S R L G+ + + +A
Sbjct: 188 KIEVPSNKVGVLIGKSGDTIRYLQYNSGAKIQITRDADADPHSSTRPVELIGTLESIDKA 247
Query: 106 RARIEELIDSVMVEQFSGAN 125
E+L+++V+ E +G +
Sbjct: 248 ----EKLMNAVIAEADAGGS 263
>gi|426386866|ref|XP_004059901.1| PREDICTED: far upstream element-binding protein 2 [Gorilla gorilla
gorilla]
Length = 813
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ+ I R D G + NE G GG I V VP+ +VGVVIG+ G+M
Sbjct: 395 QQACEMVMDILRERDQ-GGFGDRNEYGSRIGGG-------IDVPVPRHSVGVVIGRSGEM 446
Query: 67 IKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+QN+ G R+QF Q P ++ + G PD+ + A I +L+ S+
Sbjct: 447 IKKIQNDAGVRIQFKQDDGTGP-EKIAHIMGPPDRCEHAARIINDLLQSL 495
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q ++G +VQ P +R L+G+P+ VQ+A+ ++
Sbjct: 253 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-ERSVSLTGAPESVQKAKMMLD 311
Query: 111 ELI 113
+++
Sbjct: 312 DIV 314
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
+P G+VIG+GG+ +K + +TGA V+ + DP+ + ++ GSP Q+ A+
Sbjct: 533 IPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQL 592
Query: 109 IEELID 114
IEE I+
Sbjct: 593 IEEKIE 598
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 30 NENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDP 88
N NG G + E+ +P G+VIGKGG+ IK+LQ G ++ +Q ++
Sbjct: 328 NANGGQNGTVQEIM-------IPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTN 380
Query: 89 SDRRCMLSGSPDQVQEARARIEELIDSVMVEQFSGANFDK 128
D+ + G P +VQ+A E++ ++ E+ G D+
Sbjct: 381 VDKPLRIIGDPYKVQQAC----EMVMDILRERDQGGFGDR 416
>gi|432887611|ref|XP_004074938.1| PREDICTED: far upstream element-binding protein 3-like [Oryzias
latipes]
Length = 562
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 5/72 (6%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
+ V VP+ AVG++IG+ G+MIKK+QN+ G R+QF ++DD DR + G P+
Sbjct: 261 LDVVVPRFAVGIIIGRNGEMIKKIQNDAGVRIQF---KQDDGISPDRVAQVMGQPEHCHH 317
Query: 105 ARARIEELIDSV 116
A I EL+ +
Sbjct: 318 AVHLINELVQTA 329
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 52/89 (58%), Gaps = 14/89 (15%)
Query: 29 FNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP 88
F+ + DG G + Q+ +P VG+VIGKGG+ IK+LQ TG ++ +Q DDP
Sbjct: 159 FHNDMDGNG-------SIQQMLIPANKVGLVIGKGGETIKQLQERTGVQMMMIQ---DDP 208
Query: 89 ----SDRRCMLSGSPDQVQEARARIEELI 113
+D+ ++G P +VQ+AR + +LI
Sbjct: 209 MPTGADKPLRITGDPLKVQQARELVVKLI 237
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IGKGG+ I ++Q E+G ++Q + DR C L+GSP+ +++A+ +
Sbjct: 89 VPDKMVGFIIGKGGEQISRIQQESGCKIQ-IASDSGGMLDRPCTLTGSPENIEQAKRLLS 147
Query: 111 ELID 114
E+I+
Sbjct: 148 EIIE 151
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 7/84 (8%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ--MREDDPS 89
N G GG+ EVT+ VP G+VIGKGG+ IK ++ ++ A V+ + DP+
Sbjct: 347 NTGGAGGLQEVTY-----AVPADKCGLVIGKGGETIKNIKEQSRAHVELQRNPPPSTDPN 401
Query: 90 DRRCMLSGSPDQVQEARARIEELI 113
R + G+P Q+++AR I+E I
Sbjct: 402 VRIFSIRGTPQQLEKARQLIDERI 425
>gi|308501016|ref|XP_003112693.1| hypothetical protein CRE_30686 [Caenorhabditis remanei]
gi|308267261|gb|EFP11214.1| hypothetical protein CRE_30686 [Caenorhabditis remanei]
Length = 597
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 47/68 (69%), Gaps = 4/68 (5%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEA 105
+V VP+++VG++IGK GD IK+L ETG ++QF +DDP+ +R ++ G+ +Q+ A
Sbjct: 234 EVVVPRSSVGIIIGKQGDTIKRLAMETGTKIQF--KPDDDPTTEERTAIVMGTREQIYRA 291
Query: 106 RARIEELI 113
RI EL+
Sbjct: 292 TERITELV 299
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
+P++AVG+VIG+GG I+ +Q + G RVQ D+ R+ L GS V+ A+ I
Sbjct: 57 IPESAVGIVIGRGGSEIQGIQAKAGCRVQM-SSDNDNSGVRQVTLEGSRANVEAAKVLIN 115
Query: 111 ELI 113
E++
Sbjct: 116 EVV 118
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ VP A G+VIGKGG+ IK++ E+GA + + P ++ ++ G Q++ A+
Sbjct: 324 MSVPAAKCGLVIGKGGETIKQINAESGAHCELSRDANASPDEKVFVIKGGRRQIEHAKHL 383
Query: 109 I 109
I
Sbjct: 384 I 384
Score = 35.8 bits (81), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/69 (23%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM-LSGSPDQVQE 104
I + +P G++IGK G+ I++LQ ++G ++ VQ + + + ++G P +++
Sbjct: 136 TIDIPIPPNRCGLIIGKAGETIRQLQEKSGCKMILVQENQSISDQAKPLRITGDPQKIEI 195
Query: 105 ARARIEELI 113
A+ + +++
Sbjct: 196 AKQLVADIL 204
>gi|359322253|ref|XP_542140.4| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 2 [Canis lupus familiaris]
Length = 840
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ+ I R D G + NE G GG I V VP+ +VGVVIG+ G+M
Sbjct: 422 QQACEMVMDILRERDQ-GGFGDRNEYGSRIGGG-------IDVPVPRHSVGVVIGRSGEM 473
Query: 67 IKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+QN+ G R+QF Q P ++ + G PD+ + A I +L+ S+
Sbjct: 474 IKKIQNDAGVRIQFKQDDGTGP-EKIAHIMGPPDRCEHAARIINDLLQSL 522
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q ++G +VQ P +R L+G+P+ VQ+A+ ++
Sbjct: 280 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-ERSVSLTGAPESVQKAKMMLD 338
Query: 111 ELI 113
+++
Sbjct: 339 DIV 341
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
+P G+VIG+GG+ +K + +TGA V+ + DP+ + ++ GSP Q+ A+
Sbjct: 560 IPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQL 619
Query: 109 IEELID 114
IEE I+
Sbjct: 620 IEEKIE 625
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 30 NENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDP 88
N NG G + E+ +P G+VIGKGG+ IK+LQ G ++ +Q ++
Sbjct: 355 NANGGQNGTVQEIM-------IPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTN 407
Query: 89 SDRRCMLSGSPDQVQEARARIEELIDSVMVEQFSGANFDK 128
D+ + G P +VQ+A E++ ++ E+ G D+
Sbjct: 408 VDKPLRIIGDPYKVQQAC----EMVMDILRERDQGGFGDR 443
>gi|355755365|gb|EHH59112.1| hypothetical protein EGM_09154, partial [Macaca fascicularis]
Length = 629
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ+ I R D G + NE G GG I V VP+ +VGVVIG+ G+M
Sbjct: 210 QQACEMVMDILRERDQ-GGFGDRNEYGSRIGGG-------IDVPVPRHSVGVVIGRSGEM 261
Query: 67 IKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+QN+ G R+QF Q P ++ + G PD+ + A I +L+ S+
Sbjct: 262 IKKIQNDAGVRIQFKQDDGTGP-EKIAHIMGPPDRCEHAARIINDLLQSL 310
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q ++G +VQ P +R L+G+P+ VQ+A+ ++
Sbjct: 68 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-ERSVSLTGAPESVQKAKMMLD 126
Query: 111 ELI 113
+++
Sbjct: 127 DIV 129
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
+P G+VIG+GG+ +K + +TGA V+ + DP+ + ++ GSP Q+ A+
Sbjct: 348 IPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQL 407
Query: 109 IEELID 114
IEE I+
Sbjct: 408 IEEKIE 413
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 30 NENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDP 88
N NG G + E+ +P G+VIGKGG+ IK+LQ G ++ +Q ++
Sbjct: 143 NANGGQNGTVQEIM-------IPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTN 195
Query: 89 SDRRCMLSGSPDQVQEARARIEELIDSVMVEQFSGANFDK 128
D+ + G P +VQ+A E++ ++ E+ G D+
Sbjct: 196 VDKPLRIIGDPYKVQQAC----EMVMDILRERDQGGFGDR 231
>gi|397523648|ref|XP_003831836.1| PREDICTED: far upstream element-binding protein 2-like [Pan
paniscus]
Length = 630
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I V VP+ +VGVVIG+ G+MIKK+QN+ G R+QF Q P ++ + G PD+ + A
Sbjct: 244 IDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGP-EKIAHIMGPPDRCEHAA 302
Query: 107 ARIEELIDSV 116
I +L+ S+
Sbjct: 303 RIINDLLQSL 312
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q ++G +VQ P +R L+G+P+ VQ+A+ ++
Sbjct: 70 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-ERSVSLTGAPESVQKAKMMLD 128
Query: 111 ELI 113
+++
Sbjct: 129 DIV 131
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 40 WEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCMLSG 97
W + +P G+VIG+GG+ +K + +TGA V+ + DP+ + ++ G
Sbjct: 339 WGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRG 398
Query: 98 SPDQVQEARARIEELID 114
SP Q+ A+ IEE I+
Sbjct: 399 SPQQIDHAKQLIEEKIE 415
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSDRRCMLSGSPDQVQE 104
V ++ +P G+VIGKGG+ IK+LQ G ++ +Q ++ D+ + G P +VQ+
Sbjct: 154 VQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQ 213
Query: 105 A 105
A
Sbjct: 214 A 214
>gi|357465709|ref|XP_003603139.1| Far upstream element-binding protein [Medicago truncatula]
gi|355492187|gb|AES73390.1| Far upstream element-binding protein [Medicago truncatula]
Length = 605
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/88 (38%), Positives = 53/88 (60%), Gaps = 6/88 (6%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM--LSGSPDQVQEA 105
++ +P VGV+IGKGG+ IK LQ ++GA++Q + + DP+ + M L G+PD V A
Sbjct: 89 KIEIPNGRVGVLIGKGGETIKYLQMQSGAKIQVTRDMDADPNSQTRMVELMGTPDAVSSA 148
Query: 106 RARIEELIDSVMVEQFSGANFDKLRSTV 133
E+LI+ V+ E +GA+ R V
Sbjct: 149 ----EKLINEVLAEAEAGASVGGTRRMV 172
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRE---DDPSDRRCMLSGSPDQVQEARA 107
+P VG++IGKGG+ IK +Q TGAR+Q + + D ++R + G+PDQ++ A+
Sbjct: 184 IPNNKVGLIIGKGGETIKGMQASTGARIQVIPLHPPPGDTSTERTLKIDGTPDQIESAKQ 243
Query: 108 RIEELI 113
+ +++
Sbjct: 244 LVNQIL 249
>gi|344237643|gb|EGV93746.1| Far upstream element-binding protein 2 [Cricetulus griseus]
Length = 593
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ+ I R D G + NE G GG I V VP+ +VGVVIG+ G+M
Sbjct: 139 QQACEMVMDILRERDQ-GGFGDRNEYGSRVGGG-------IDVPVPRHSVGVVIGRSGEM 190
Query: 67 IKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+QN+ G R+QF Q P ++ + G PD+ + A I +L+ S+
Sbjct: 191 IKKIQNDAGVRIQFKQDDGTGP-EKIAHIMGPPDRCEHAARIINDLLQSL 239
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
+P G+VIG+GG+ +K + +TGA V+ + DP+ + ++ GSP Q+ A+
Sbjct: 277 IPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFVIRGSPQQIDHAKQL 336
Query: 109 IEELID 114
IEE I+
Sbjct: 337 IEEKIE 342
Score = 43.9 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 39/58 (67%), Gaps = 1/58 (1%)
Query: 56 VGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELI 113
VG++IG+GG+ I K+Q ++G +VQ P +R L+G+P+ VQ+A+ +++++
Sbjct: 2 VGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-ERSVSLTGAPESVQKAKMMLDDIV 58
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 30 NENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDP 88
N NG G + E+ +P G+VIGKGG+ IK+LQ G ++ +Q ++
Sbjct: 72 NANGGQNGTVQEIM-------IPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTN 124
Query: 89 SDRRCMLSGSPDQVQEA 105
D+ + G P +VQ+A
Sbjct: 125 VDKPLRIIGDPYKVQQA 141
>gi|149028151|gb|EDL83589.1| KH-type splicing regulatory protein, isoform CRA_b [Rattus
norvegicus]
Length = 721
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I V VP+ +VGVVIG+ G+MIKK+QN+ G R+QF Q P ++ + G PD+ + A
Sbjct: 326 IDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGP-EKIAHIMGPPDRCEHAA 384
Query: 107 ARIEELIDSV 116
I +L+ S+
Sbjct: 385 RIINDLLQSL 394
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q ++G +VQ P +R L+G+P+ VQ+A+ ++
Sbjct: 152 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-ERSVSLTGAPESVQKAKMMLD 210
Query: 111 ELI 113
+++
Sbjct: 211 DIV 213
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 50 CVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCMLSGSPDQVQEARA 107
+P G+VIG+GG+ +K + +TGA V+ + DP+ + ++ GSP Q+ A+
Sbjct: 431 SIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFVIRGSPQQIDHAKQ 490
Query: 108 RIEELID 114
IEE I+
Sbjct: 491 LIEEKIE 497
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSDRRCMLSGSPDQVQE 104
V ++ +P G+VIGKGG+ IK+LQ G ++ +Q ++ D+ + G P +VQ+
Sbjct: 236 VQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQ 295
Query: 105 A 105
A
Sbjct: 296 A 296
>gi|148706277|gb|EDL38224.1| mCG140911, isoform CRA_a [Mus musculus]
Length = 765
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I V VP+ +VGVVIG+ G+MIKK+QN+ G R+QF Q P ++ + G PD+ + A
Sbjct: 362 IDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGP-EKIAHIMGPPDRCEHAA 420
Query: 107 ARIEELIDSV 116
I +L+ S+
Sbjct: 421 RIINDLLQSL 430
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q ++G +VQ P +R L+G+P+ VQ+A+ ++
Sbjct: 188 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-ERSVSLTGAPESVQKAKMMLD 246
Query: 111 ELI 113
+++
Sbjct: 247 DIV 249
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 50 CVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCMLSGSPDQVQEARA 107
+P G+VIG+GG+ +K + +TGA V+ + DP+ + ++ GSP Q+ A+
Sbjct: 467 SIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFVIRGSPQQIDHAKQ 526
Query: 108 RIEELID 114
IEE I+
Sbjct: 527 LIEEKIE 533
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSDRRCMLSGSPDQVQE 104
V ++ +P G+VIGKGG+ IK+LQ G ++ +Q ++ D+ + G P +VQ+
Sbjct: 272 VQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQ 331
Query: 105 A 105
A
Sbjct: 332 A 332
>gi|2055427|gb|AAB53222.1| KSRP [Homo sapiens]
Length = 711
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I V VP+ +VGVVIG+ G+MIKK+QN+ G R+QF Q P ++ + G PD+ + A
Sbjct: 325 IDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGP-EKIAHIMGPPDRCEHAA 383
Query: 107 ARIEELIDSV 116
I +L+ S+
Sbjct: 384 RIINDLLQSL 393
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q ++G +VQ P +R L+G+P+ VQ+A+ ++
Sbjct: 151 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-ERSVSLTGAPESVQKAKMMLD 209
Query: 111 ELI 113
+++
Sbjct: 210 DIV 212
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 40 WEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCMLSG 97
W + +P G+VIG+GG+ +K + +TGA V+ + DP+ + ++ G
Sbjct: 420 WGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRG 479
Query: 98 SPDQVQEARARIEELID 114
SP Q+ A+ IEE I+
Sbjct: 480 SPQQIDHAKQLIEEKIE 496
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSDRRCMLSGSPDQVQE 104
V ++ +P G+VIGKGG+ IK+LQ G ++ +Q ++ D+ + G P +VQ+
Sbjct: 235 VQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQ 294
Query: 105 A 105
A
Sbjct: 295 A 295
>gi|154355000|ref|NP_003676.2| far upstream element-binding protein 2 [Homo sapiens]
gi|332852032|ref|XP_512315.3| PREDICTED: far upstream element-binding protein 2 [Pan troglodytes]
gi|402903923|ref|XP_003914804.1| PREDICTED: far upstream element-binding protein 2 [Papio anubis]
gi|313104306|sp|Q92945.4|FUBP2_HUMAN RecName: Full=Far upstream element-binding protein 2;
Short=FUSE-binding protein 2; AltName: Full=KH
type-splicing regulatory protein; Short=KSRP; AltName:
Full=p75
gi|119589503|gb|EAW69097.1| KH-type splicing regulatory protein (FUSE binding protein 2),
isoform CRA_c [Homo sapiens]
Length = 711
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I V VP+ +VGVVIG+ G+MIKK+QN+ G R+QF Q P ++ + G PD+ + A
Sbjct: 325 IDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGP-EKIAHIMGPPDRCEHAA 383
Query: 107 ARIEELIDSV 116
I +L+ S+
Sbjct: 384 RIINDLLQSL 393
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q ++G +VQ P +R L+G+P+ VQ+A+ ++
Sbjct: 151 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-ERSVSLTGAPESVQKAKMMLD 209
Query: 111 ELI 113
+++
Sbjct: 210 DIV 212
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 40 WEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCMLSG 97
W + +P G+VIG+GG+ +K + +TGA V+ + DP+ + ++ G
Sbjct: 420 WGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRG 479
Query: 98 SPDQVQEARARIEELID 114
SP Q+ A+ IEE I+
Sbjct: 480 SPQQIDHAKQLIEEKIE 496
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSDRRCMLSGSPDQVQE 104
V ++ +P G+VIGKGG+ IK+LQ G ++ +Q ++ D+ + G P +VQ+
Sbjct: 235 VQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQ 294
Query: 105 A 105
A
Sbjct: 295 A 295
>gi|291415509|ref|XP_002723994.1| PREDICTED: KH-type splicing regulatory protein, partial
[Oryctolagus cuniculus]
Length = 349
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I V VP+ +VGVVIG+ G+MIKK+QN+ G R+QF Q P ++ + G PD+ + A
Sbjct: 242 IDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGP-EKIAHIMGPPDRCEHAA 300
Query: 107 ARIEELIDSVMV 118
I +L+ S+ V
Sbjct: 301 RIINDLLQSLRV 312
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q ++G +VQ P +R L+G+P+ VQ+A+ ++
Sbjct: 68 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-ERSVSLTGAPESVQKAKMMLD 126
Query: 111 ELI 113
+++
Sbjct: 127 DIV 129
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSDRRCMLSGSPDQVQE 104
V ++ +P G+VIGKGG+ IK+LQ G ++ +Q ++ D+ + G P +VQ+
Sbjct: 152 VQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQ 211
Query: 105 A 105
A
Sbjct: 212 A 212
>gi|148706278|gb|EDL38225.1| mCG140911, isoform CRA_b [Mus musculus]
Length = 773
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ+ I R D G + NE G GG I V VP+ +VGVVIG+ G+M
Sbjct: 319 QQACEMVMDILRERDQ-GGFGDRNEYGSRVGGG-------IDVPVPRHSVGVVIGRSGEM 370
Query: 67 IKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+QN+ G R+QF Q P ++ + G PD+ + A I +L+ S+
Sbjct: 371 IKKIQNDAGVRIQFKQDDGTGP-EKIAHIMGPPDRCEHAARIINDLLQSL 419
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q ++G +VQ P +R L+G+P+ VQ+A+ ++
Sbjct: 177 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-ERSVSLTGAPESVQKAKMMLD 235
Query: 111 ELI 113
+++
Sbjct: 236 DIV 238
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
+P G+VIG+GG+ +K + +TGA V+ + DP+ + ++ GSP Q+ A+
Sbjct: 457 IPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFVIRGSPQQIDHAKQL 516
Query: 109 IEELID 114
IEE I+
Sbjct: 517 IEEKIE 522
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 30 NENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDP 88
N NG G + E+ +P G+VIGKGG+ IK+LQ G ++ +Q ++
Sbjct: 252 NANGGQNGTVQEIM-------IPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTN 304
Query: 89 SDRRCMLSGSPDQVQEA 105
D+ + G P +VQ+A
Sbjct: 305 VDKPLRIIGDPYKVQQA 321
>gi|149028150|gb|EDL83588.1| KH-type splicing regulatory protein, isoform CRA_a [Rattus
norvegicus]
Length = 729
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I V VP+ +VGVVIG+ G+MIKK+QN+ G R+QF Q P ++ + G PD+ + A
Sbjct: 326 IDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGP-EKIAHIMGPPDRCEHAA 384
Query: 107 ARIEELIDSV 116
I +L+ S+
Sbjct: 385 RIINDLLQSL 394
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q ++G +VQ P +R L+G+P+ VQ+A+ ++
Sbjct: 152 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-ERSVSLTGAPESVQKAKMMLD 210
Query: 111 ELI 113
+++
Sbjct: 211 DIV 213
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 50 CVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCMLSGSPDQVQEARA 107
+P G+VIG+GG+ +K + +TGA V+ + DP+ + ++ GSP Q+ A+
Sbjct: 431 SIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFVIRGSPQQIDHAKQ 490
Query: 108 RIEELID 114
IEE I+
Sbjct: 491 LIEEKIE 497
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSDRRCMLSGSPDQVQE 104
V ++ +P G+VIGKGG+ IK+LQ G ++ +Q ++ D+ + G P +VQ+
Sbjct: 236 VQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQ 295
Query: 105 A 105
A
Sbjct: 296 A 296
>gi|380800867|gb|AFE72309.1| far upstream element-binding protein 2, partial [Macaca mulatta]
Length = 660
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I V VP+ +VGVVIG+ G+MIKK+QN+ G R+QF Q P ++ + G PD+ + A
Sbjct: 274 IDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGP-EKIAHIMGPPDRCEHAA 332
Query: 107 ARIEELIDSV 116
I +L+ S+
Sbjct: 333 RIINDLLQSL 342
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q ++G +VQ P +R L+G+P+ VQ+A+ ++
Sbjct: 100 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-ERSVSLTGAPESVQKAKMMLD 158
Query: 111 ELI 113
+++
Sbjct: 159 DIV 161
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 40 WEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCMLSG 97
W + +P G+VIG+GG+ +K + +TGA V+ + DP+ + ++ G
Sbjct: 369 WGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRG 428
Query: 98 SPDQVQEARARIEELID 114
SP Q+ A+ IEE I+
Sbjct: 429 SPQQIDHAKQLIEEKIE 445
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSDRRCMLSGSPDQVQE 104
V ++ +P G+VIGKGG+ IK+LQ G ++ +Q ++ D+ + G P +VQ+
Sbjct: 184 VQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQ 243
Query: 105 A 105
A
Sbjct: 244 A 244
>gi|163954948|ref|NP_034743.3| far upstream element-binding protein 2 [Mus musculus]
gi|341940718|sp|Q3U0V1.2|FUBP2_MOUSE RecName: Full=Far upstream element-binding protein 2;
Short=FUSE-binding protein 2; AltName: Full=KH
type-splicing regulatory protein; Short=KSRP
Length = 748
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I V VP+ +VGVVIG+ G+MIKK+QN+ G R+QF Q P ++ + G PD+ + A
Sbjct: 326 IDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGP-EKIAHIMGPPDRCEHAA 384
Query: 107 ARIEELIDSV 116
I +L+ S+
Sbjct: 385 RIINDLLQSL 394
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q ++G +VQ P +R L+G+P+ VQ+A+ ++
Sbjct: 152 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-ERSVSLTGAPESVQKAKMMLD 210
Query: 111 ELI 113
+++
Sbjct: 211 DIV 213
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 40 WEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCMLSG 97
W + +P G+VIG+GG+ +K + +TGA V+ + DP+ + ++ G
Sbjct: 421 WGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFVIRG 480
Query: 98 SPDQVQEARARIEELID 114
SP Q+ A+ IEE I+
Sbjct: 481 SPQQIDHAKQLIEEKIE 497
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSDRRCMLSGSPDQVQE 104
V ++ +P G+VIGKGG+ IK+LQ G ++ +Q ++ D+ + G P +VQ+
Sbjct: 236 VQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQ 295
Query: 105 A 105
A
Sbjct: 296 A 296
>gi|359067148|ref|XP_003586314.1| PREDICTED: far upstream element-binding protein 2-like, partial
[Bos taurus]
Length = 679
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I V VP+ +VGVVIG+ G+MIKK+QN+ G R+QF Q P ++ + G PD+ + A
Sbjct: 272 IDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGP-EKIAHIMGPPDRCEHAA 330
Query: 107 ARIEELIDSV 116
I +L+ S+
Sbjct: 331 RIINDLLQSL 340
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q ++G +VQ P +R L+G+P+ VQ+A+ ++
Sbjct: 98 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-ERSVSLTGAPESVQKAKMMLD 156
Query: 111 ELI 113
+++
Sbjct: 157 DIV 159
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 40 WEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCMLSG 97
W + +P G+VIG+GG+ +K + +TGA V+ + DP+ + ++ G
Sbjct: 367 WGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRG 426
Query: 98 SPDQVQEARARIEELID 114
SP Q+ A+ IEE I+
Sbjct: 427 SPQQIDHAKQLIEEKIE 443
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSDRRCMLSGSPDQVQE 104
V ++ +P G+VIGKGG+ IK+LQ G ++ +Q ++ D+ + G P +VQ+
Sbjct: 182 VQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQ 241
Query: 105 A 105
A
Sbjct: 242 A 242
>gi|355697562|gb|AES00713.1| KH-type splicing regulatory protein [Mustela putorius furo]
Length = 663
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ+ I R D G + NE G GG I V VP+ +VGVVIG+ G+M
Sbjct: 210 QQACEMVMDILRERDQ-GGFGDRNEYGSRIGGG-------IDVPVPRHSVGVVIGRSGEM 261
Query: 67 IKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+QN+ G R+QF Q P ++ + G PD+ + A I +L+ S+
Sbjct: 262 IKKIQNDAGVRIQFKQDDGTGP-EKIAHIMGPPDRCEHAARIINDLLQSL 310
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q ++G +VQ P +R L+G+P+ VQ+A+ ++
Sbjct: 68 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-ERSVSLTGAPESVQKAKMMLD 126
Query: 111 ELI 113
+++
Sbjct: 127 DIV 129
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
+P G+VIG+GG+ +K + +TGA V+ + DP+ + ++ GSP Q+ A+
Sbjct: 348 IPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQL 407
Query: 109 IEELID 114
IEE I+
Sbjct: 408 IEEKIE 413
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 30 NENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDP 88
N NG G + E+ +P G+VIGKGG+ IK+LQ G ++ +Q ++
Sbjct: 143 NANGGQNGTVQEIM-------IPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTN 195
Query: 89 SDRRCMLSGSPDQVQEA 105
D+ + G P +VQ+A
Sbjct: 196 VDKPLRIIGDPYKVQQA 212
>gi|395850961|ref|XP_003798040.1| PREDICTED: far upstream element-binding protein 2 [Otolemur
garnettii]
Length = 712
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I V VP+ +VGVVIG+ G+MIKK+QN+ G R+QF Q P ++ + G PD+ + A
Sbjct: 326 IDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGP-EKIAHIMGPPDRCEHAA 384
Query: 107 ARIEELIDSV 116
I +L+ S+
Sbjct: 385 RIINDLLQSL 394
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q ++G +VQ P +R L+G+P+ VQ+A+ ++
Sbjct: 152 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-ERSVSLTGAPESVQKAKMMLD 210
Query: 111 ELI 113
+++
Sbjct: 211 DIV 213
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 40 WEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCMLSG 97
W + +P G+VIG+GG+ +K + +TGA V+ + DP+ + ++ G
Sbjct: 421 WGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRG 480
Query: 98 SPDQVQEARARIEELID 114
SP Q+ A+ IEE I+
Sbjct: 481 SPQQIDHAKQLIEEKIE 497
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSDRRCMLSGSPDQVQE 104
V ++ +P G+VIGKGG+ IK+LQ G ++ +Q ++ D+ + G P +VQ+
Sbjct: 236 VQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQ 295
Query: 105 A 105
A
Sbjct: 296 A 296
>gi|297275911|ref|XP_001090850.2| PREDICTED: far upstream element-binding protein 2 [Macaca mulatta]
Length = 686
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ+ I R D G + NE G GG I V VP+ +VGVVIG+ G+M
Sbjct: 232 QQACEMVMDILRERDQ-GGFGDRNEYGSRIGGG-------IDVPVPRHSVGVVIGRSGEM 283
Query: 67 IKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+QN+ G R+QF Q P ++ + G PD+ + A I +L+ S+
Sbjct: 284 IKKIQNDAGVRIQFKQDDGTGP-EKIAHIMGPPDRCEHAARIINDLLQSL 332
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q ++G +VQ P +R L+G+P+ VQ+A+ ++
Sbjct: 90 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-ERSVSLTGAPESVQKAKMMLD 148
Query: 111 ELI 113
+++
Sbjct: 149 DIV 151
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
+P G+VIG+GG+ +K + +TGA V+ + DP+ + ++ GSP Q+ A+
Sbjct: 370 IPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQL 429
Query: 109 IEELID 114
IEE I+
Sbjct: 430 IEEKIE 435
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 30 NENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDP 88
N NG G + E+ +P G+VIGKGG+ IK+LQ G ++ +Q ++
Sbjct: 165 NANGGQNGTVQEIM-------IPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTN 217
Query: 89 SDRRCMLSGSPDQVQEA 105
D+ + G P +VQ+A
Sbjct: 218 VDKPLRIIGDPYKVQQA 234
>gi|119589502|gb|EAW69096.1| KH-type splicing regulatory protein (FUSE binding protein 2),
isoform CRA_b [Homo sapiens]
Length = 747
Score = 57.8 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ+ I R D G + NE G GG I V VP+ +VGVVIG+ G+M
Sbjct: 293 QQACEMVMDILRERDQ-GGFGDRNEYGSRIGGG-------IDVPVPRHSVGVVIGRSGEM 344
Query: 67 IKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+QN+ G R+QF Q P ++ + G PD+ + A I +L+ S+
Sbjct: 345 IKKIQNDAGVRIQFKQDDGTGP-EKIAHIMGPPDRCEHAARIINDLLQSL 393
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q ++G +VQ P +R L+G+P+ VQ+A+ ++
Sbjct: 151 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-ERSVSLTGAPESVQKAKMMLD 209
Query: 111 ELI 113
+++
Sbjct: 210 DIV 212
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
+P G+VIG+GG+ +K + +TGA V+ + DP+ + ++ GSP Q+ A+
Sbjct: 431 IPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQL 490
Query: 109 IEELID 114
IEE I+
Sbjct: 491 IEEKIE 496
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 30 NENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDP 88
N NG G + E+ +P G+VIGKGG+ IK+LQ G ++ +Q ++
Sbjct: 226 NANGGQNGTVQEIM-------IPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTN 278
Query: 89 SDRRCMLSGSPDQVQEA 105
D+ + G P +VQ+A
Sbjct: 279 VDKPLRIIGDPYKVQQA 295
>gi|431922364|gb|ELK19455.1| Far upstream element-binding protein 2 [Pteropus alecto]
Length = 709
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I V VP+ +VGVVIG+ G+MIKK+QN+ G R+QF Q P ++ + G PD+ + A
Sbjct: 287 IDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGP-EKIAHIMGPPDRCEHAA 345
Query: 107 ARIEELIDSV 116
I +L+ S+
Sbjct: 346 RIINDLLQSL 355
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q ++G +VQ P +R L+G+P+ VQ+A+ ++
Sbjct: 113 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-ERSVSLTGAPESVQKAKMMLD 171
Query: 111 ELI 113
+++
Sbjct: 172 DIV 174
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCMLSGSPDQVQEARAR 108
+P G+VIG+GG+ +K + +TGA V+ + DP+ + ++ GSP Q+ A+
Sbjct: 393 IPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFVIRGSPQQIDHAKQL 452
Query: 109 IEELID 114
IEE I+
Sbjct: 453 IEEKIE 458
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSDRRCMLSGSPDQVQE 104
V ++ +P G+VIGKGG+ IK+LQ G ++ +Q ++ D+ + G P +VQ+
Sbjct: 197 VQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQ 256
Query: 105 A 105
A
Sbjct: 257 A 257
>gi|47223565|emb|CAF99174.1| unnamed protein product [Tetraodon nigroviridis]
Length = 561
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEA 105
+ V VP+ AVG++IG+ G+MI+K+QN+ G R+QF Q P DR + G PD A
Sbjct: 259 TLDVVVPRFAVGIIIGRNGEMIRKIQNDAGVRIQFKQDDGISP-DRVAQVMGQPDHCHHA 317
Query: 106 RARIEELIDSV 116
I EL+ +
Sbjct: 318 VHIINELVQTA 328
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 44/70 (62%), Gaps = 7/70 (10%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP----SDRRCMLSGSPDQVQ 103
Q+ +P VG+VIGK G+ IK+LQ TG ++ +Q DDP +D+ ++G P +VQ
Sbjct: 170 QILIPANKVGLVIGKKGETIKQLQERTGVQMIMIQ---DDPLPTGADKPLRITGDPQKVQ 226
Query: 104 EARARIEELI 113
+AR + +LI
Sbjct: 227 QARELVVKLI 236
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IGKGG+ I ++Q E+G ++Q DR C L+GSP+ +++A+ +
Sbjct: 88 VPDKMVGFIIGKGGEQISRIQLESGCKIQIAS-DSGGMLDRPCTLTGSPENIEQAKRLLN 146
Query: 111 ELID 114
E+++
Sbjct: 147 EIVE 150
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 7/84 (8%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ--MREDDPS 89
N G GG+ EVT+ VP G+VIGKGG+ IK ++ ++ A V+ + DP+
Sbjct: 347 NMGGPGGLQEVTY-----AVPADKCGLVIGKGGETIKNIKEQSRAHVELQRNPPPNTDPN 401
Query: 90 DRRCMLSGSPDQVQEARARIEELI 113
R + G+P Q+++AR I+E I
Sbjct: 402 IRIFSIRGTPQQLEKARQLIDERI 425
>gi|410950239|ref|XP_004001515.1| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 2 [Felis catus]
Length = 667
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ+ I R D G + NE G GG I V VP+ +VGVVIG+ G+M
Sbjct: 213 QQACEMVMDILRERDQ-GGFGDRNEYGSRIGGG-------IDVPVPRHSVGVVIGRSGEM 264
Query: 67 IKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+QN+ G R+QF Q P ++ + G PD+ + A I +L+ S+
Sbjct: 265 IKKIQNDAGVRIQFKQDDGTGP-EKIAHIMGPPDRCEHAARIINDLLQSL 313
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q ++G +VQ P +R L+G+P+ VQ+A+ ++
Sbjct: 71 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-ERSVSLTGAPESVQKAKMMLD 129
Query: 111 ELI 113
+++
Sbjct: 130 DIV 132
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
+P G+VIG+GG+ +K + +TGA V+ + DP+ + ++ GSP Q+ A+
Sbjct: 351 IPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQL 410
Query: 109 IEELID 114
IEE I+
Sbjct: 411 IEEKIE 416
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 30 NENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS 89
N NG G + E+ +P G+VIGKGG+ IK+LQ G ++ +Q + +
Sbjct: 146 NANGGQNGTVQEIM-------IPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTN 198
Query: 90 -DRRCMLSGSPDQVQEA 105
D+ + G P +VQ+A
Sbjct: 199 VDKPLRIIGDPYKVQQA 215
>gi|350580630|ref|XP_003123158.3| PREDICTED: far upstream element-binding protein 2-like [Sus scrofa]
Length = 747
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I V VP+ +VGVVIG+ G+MIKK+QN+ G R+QF Q P ++ + G PD+ + A
Sbjct: 325 IDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGP-EKIAHIMGPPDRCEHAA 383
Query: 107 ARIEELIDSV 116
I +L+ S+
Sbjct: 384 RIINDLLQSL 393
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q ++G +VQ P +R L+G+P+ VQ+A+ ++
Sbjct: 151 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-ERSVSLTGAPESVQKAKMMLD 209
Query: 111 ELI 113
+++
Sbjct: 210 DIV 212
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 40 WEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCMLSG 97
W + +P G+VIG+GG+ +K + +TGA V+ + DP+ + ++ G
Sbjct: 420 WGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRG 479
Query: 98 SPDQVQEARARIEELID 114
SP Q+ A+ IEE I+
Sbjct: 480 SPQQIDHAKQLIEEKIE 496
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSDRRCMLSGSPDQVQE 104
V ++ +P G+VIGKGG+ IK+LQ G ++ +Q ++ D+ + G P +VQ+
Sbjct: 235 VQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQ 294
Query: 105 A 105
A
Sbjct: 295 A 295
>gi|432101996|gb|ELK29816.1| Far upstream element-binding protein 2, partial [Myotis davidii]
Length = 664
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ+ I R D G + NE G GG I V VP+ +VGVVIG+ G+M
Sbjct: 210 QQACEMVMDILRERDQ-GGFGDRNEYGSRIGGG-------IDVPVPRHSVGVVIGRSGEM 261
Query: 67 IKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+QN+ G R+QF Q P ++ + G PD+ + A I +L+ S+
Sbjct: 262 IKKIQNDAGVRIQFKQDDGTGP-EKIAHIMGPPDRCEHAARIINDLLQSL 310
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q ++G +VQ P +R L+G+P+ VQ+A+ ++
Sbjct: 68 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-ERSVSLTGAPESVQKAKMMLD 126
Query: 111 ELI 113
+++
Sbjct: 127 DIV 129
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
+P G+VIG+GG+ +K + +TGA V+ + DP+ + ++ GSP Q+ A+
Sbjct: 348 IPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQL 407
Query: 109 IEELID 114
IEE I+
Sbjct: 408 IEEKIE 413
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 30 NENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDP 88
N NG G + E+ +P G+VIGKGG+ IK+LQ G ++ +Q ++
Sbjct: 143 NSNGGQNGTVQEIM-------IPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTN 195
Query: 89 SDRRCMLSGSPDQVQEA 105
D+ + G P +VQ+A
Sbjct: 196 VDKPLRIIGDPYKVQQA 212
>gi|390478449|ref|XP_003735512.1| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 2 [Callithrix jacchus]
Length = 657
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I V VP+ +VGVVIG+ G+MIKK+QN+ G R+QF Q P ++ + G PD+ + A
Sbjct: 271 IDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGP-EKIAHIMGPPDRCEHAA 329
Query: 107 ARIEELIDSV 116
I +L+ S+
Sbjct: 330 RIINDLLQSL 339
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q ++G +VQ P +R L+G+P+ VQ+A+ ++
Sbjct: 97 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-ERSVSLTGAPESVQKAKMMLD 155
Query: 111 ELI 113
+++
Sbjct: 156 DIV 158
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 40 WEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCMLSG 97
W + +P G+VIG+GG+ +K + +TGA V+ + DP+ + ++ G
Sbjct: 366 WGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRG 425
Query: 98 SPDQVQEARARIEELID 114
SP Q+ A+ IEE I+
Sbjct: 426 SPQQIDHAKQLIEEKIE 442
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSDRRCMLSGSPDQVQE 104
V ++ +P G+VIGKGG+ IK+LQ G ++ +Q ++ D+ + G P +VQ+
Sbjct: 181 VQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQ 240
Query: 105 A 105
A
Sbjct: 241 A 241
>gi|168028621|ref|XP_001766826.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682035|gb|EDQ68457.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 705
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 50/74 (67%), Gaps = 6/74 (8%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQEA 105
++ VP + VG+VIGKGG+ IK LQ+++GAR+Q + E DP S R+ L G+P+Q+
Sbjct: 248 KIDVPNSKVGLVIGKGGETIKYLQHQSGARIQVARDGESDPRSSTRQVELMGTPEQI--- 304
Query: 106 RARIEELIDSVMVE 119
+R E+L+ V+ E
Sbjct: 305 -SRAEQLVKDVIAE 317
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQV 102
E +QV VP VG++IG+GG+ IK LQ+ +GAR+Q E +P ++R L G+
Sbjct: 342 EQVQVKVPNNKVGLIIGRGGETIKNLQSRSGARIQVQNDSETEPGATERMVTLIGNKKAT 401
Query: 103 QEARARIEELIDSV 116
A I+E+ID +
Sbjct: 402 DMAYELIKEVIDEL 415
>gi|327264009|ref|XP_003216809.1| PREDICTED: far upstream element-binding protein 2-like [Anolis
carolinensis]
Length = 699
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I V VP+ +VGVVIG+ G+MIKK+QN+ G R+QF Q P ++ + G PD+ + A
Sbjct: 315 IDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGP-EKIAHIMGPPDRCEHAA 373
Query: 107 ARIEELIDSV 116
I +L+ S+
Sbjct: 374 RIINDLLQSL 383
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q ++G +VQ P +R L+GSP+ VQ+A+ ++
Sbjct: 142 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-ERSVSLTGSPESVQKAKMMLD 200
Query: 111 ELI 113
+++
Sbjct: 201 DIV 203
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 46/83 (55%), Gaps = 7/83 (8%)
Query: 24 GNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ- 82
G +F++N +G+ G V ++ +P G+VIGKGG+ IK+LQ G ++ +Q
Sbjct: 209 GPPSQFHDNSNGQNGT------VQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQD 262
Query: 83 MREDDPSDRRCMLSGSPDQVQEA 105
++ D+ + G P +VQ+A
Sbjct: 263 GSQNTNVDKPLRIIGDPYKVQQA 285
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 40 WEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCMLSG 97
W + +P G+VIG+GG+ +K + +TGA V+ + DP+ + ++ G
Sbjct: 409 WGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRG 468
Query: 98 SPDQVQEARARIEELID 114
SP Q+ A+ IEE I+
Sbjct: 469 SPQQIDHAKQLIEEKIE 485
>gi|417412327|gb|JAA52553.1| Putative k-logy type rna binding protein, partial [Desmodus
rotundus]
Length = 689
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I V VP+ +VGVVIG+ G+MIKK+QN+ G R+QF Q P ++ + G PD+ + A
Sbjct: 267 IDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGP-EKIAHIMGPPDRCEHAA 325
Query: 107 ARIEELIDSV 116
I +L+ S+
Sbjct: 326 RIINDLLQSL 335
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q ++G +VQ P +R L+G+P+ VQ+A+ ++
Sbjct: 93 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-ERSVSLTGAPESVQKAKMMLD 151
Query: 111 ELI 113
+++
Sbjct: 152 DIV 154
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 40 WEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCMLSG 97
W + +P G+VIG+GG+ +K + +TGA V+ + DP+ + ++ G
Sbjct: 362 WGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRG 421
Query: 98 SPDQVQEARARIEELID 114
SP Q+ A+ IEE I+
Sbjct: 422 SPQQIDHAKQLIEEKIE 438
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSDRRCMLSGSPDQVQE 104
V ++ +P G+VIGKGG+ IK+LQ G ++ +Q ++ D+ + G P +VQ+
Sbjct: 177 VQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQ 236
Query: 105 A 105
A
Sbjct: 237 A 237
>gi|348550680|ref|XP_003461159.1| PREDICTED: far upstream element-binding protein 2 [Cavia porcellus]
Length = 718
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I V VP+ +VGVVIG+ G+MIKK+QN+ G R+QF Q P ++ + G PD+ + A
Sbjct: 296 IDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGP-EKIAHIMGPPDRCEHAA 354
Query: 107 ARIEELIDSV 116
I +L+ S+
Sbjct: 355 RIINDLLQSL 364
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q ++G +VQ P +R L+G+P+ VQ+A+ ++
Sbjct: 122 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-ERSVSLTGAPESVQKAKMMLD 180
Query: 111 ELI 113
+++
Sbjct: 181 DIV 183
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 40 WEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCMLSG 97
W + +P G+VIG+GG+ +K + +TGA V+ + DP+ + ++ G
Sbjct: 391 WGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRG 450
Query: 98 SPDQVQEARARIEELID 114
SP Q+ A+ IEE I+
Sbjct: 451 SPQQIDHAKQLIEEKIE 467
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSDRRCMLSGSPDQVQE 104
V ++ +P G+VIGKGG+ IK+LQ G ++ +Q ++ D+ + G P +VQ+
Sbjct: 206 VQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQ 265
Query: 105 A 105
A
Sbjct: 266 A 266
>gi|354479313|ref|XP_003501856.1| PREDICTED: far upstream element-binding protein 2-like [Cricetulus
griseus]
Length = 639
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ+ I R D G + NE G GG I V VP+ +VGVVIG+ G+M
Sbjct: 212 QQACEMVMDILRERDQ-GGFGDRNEYGSRVGGG-------IDVPVPRHSVGVVIGRSGEM 263
Query: 67 IKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+QN+ G R+QF Q P ++ + G PD+ + A I +L+ S+
Sbjct: 264 IKKIQNDAGVRIQFKQDDGTGP-EKIAHIMGPPDRCEHAARIINDLLQSL 312
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q ++G +VQ P +R L+G+P+ VQ+A+ ++
Sbjct: 70 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-ERSVSLTGAPESVQKAKMMLD 128
Query: 111 ELI 113
+++
Sbjct: 129 DIV 131
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
+P G+VIG+GG+ +K + +TGA V+ + DP+ + ++ GSP Q+ A+
Sbjct: 350 IPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFVIRGSPQQIDHAKQL 409
Query: 109 IEELID 114
IEE I+
Sbjct: 410 IEEKIE 415
Score = 40.8 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 30 NENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDP 88
N NG G + E+ +P G+VIGKGG+ IK+LQ G ++ +Q ++
Sbjct: 145 NANGGQNGTVQEIM-------IPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTN 197
Query: 89 SDRRCMLSGSPDQVQEA 105
D+ + G P +VQ+A
Sbjct: 198 VDKPLRIIGDPYKVQQA 214
>gi|358412988|ref|XP_003582441.1| PREDICTED: far upstream element-binding protein 2-like [Bos taurus]
Length = 841
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I V VP+ +VGVVIG+ G+MIKK+QN+ G R+QF Q P ++ + G PD+ + A
Sbjct: 379 IDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGP-EKIAHIMGPPDRCEHAA 437
Query: 107 ARIEELIDSV 116
I +L+ S+
Sbjct: 438 RIINDLLQSL 447
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q ++G +VQ P +R L+G+P+ VQ+A+ ++
Sbjct: 205 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-ERSVSLTGAPESVQKAKMMLD 263
Query: 111 ELI 113
+++
Sbjct: 264 DIV 266
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCMLSGSPDQVQEARAR 108
+P G+VIG+GG+ +K + +TGA V+ + DP+ + ++ GSP Q+ A+
Sbjct: 485 IPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQL 544
Query: 109 IEELID 114
IEE I+
Sbjct: 545 IEEKIE 550
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSDRRCMLSGSPDQVQE 104
V ++ +P G+VIGKGG+ IK+LQ G ++ +Q ++ D+ + G P +VQ+
Sbjct: 289 VQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQ 348
Query: 105 A 105
A
Sbjct: 349 A 349
>gi|54648253|gb|AAH85004.1| KHSRP protein [Homo sapiens]
Length = 710
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I V VP+ +VGVVIG+ G+MIKK+QN+ G R+QF Q P ++ + G PD+ + A
Sbjct: 325 IDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGP-EKIAHIMGPPDRCEHAA 383
Query: 107 ARIEELIDSV 116
I +L+ S+
Sbjct: 384 RIINDLLQSL 393
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q ++G +VQ P +R L+G+P+ VQ+A+ ++
Sbjct: 151 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-ERSVSLTGAPESVQKAKMMLD 209
Query: 111 ELI 113
+++
Sbjct: 210 DIV 212
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 40 WEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCMLSG 97
W + +P G+VIG+GG+ +K + +TGA V+ + DP+ + ++ G
Sbjct: 420 WGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRG 479
Query: 98 SPDQVQEARARIEELID 114
SP Q+ A+ IEE I+
Sbjct: 480 SPQQIDHAKQLIEEKIE 496
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 24 GNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ- 82
G +F++N +G V ++ +P G+VIGKGG+ IK+LQ G ++ +Q
Sbjct: 218 GPPGQFHDNANG-----GQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQD 272
Query: 83 MREDDPSDRRCMLSGSPDQVQEA 105
++ D+ + G P +VQ+A
Sbjct: 273 GSQNTNVDKPLRIIGDPYKVQQA 295
>gi|440901061|gb|ELR52061.1| Far upstream element-binding protein 2, partial [Bos grunniens
mutus]
Length = 664
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ+ I R D G + NE G GG I V VP+ +VGVVIG+ G+M
Sbjct: 210 QQACEMVMDILRERDQ-GGFGDRNEYGSRIGGG-------IDVPVPRHSVGVVIGRSGEM 261
Query: 67 IKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+QN+ G R+QF Q P ++ + G PD+ + A I +L+ S+
Sbjct: 262 IKKIQNDAGVRIQFKQDDGTGP-EKIAHIMGPPDRCEHAARIINDLLQSL 310
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q ++G +VQ P +R L+G+P+ VQ+A+ ++
Sbjct: 68 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-ERSVSLTGAPESVQKAKMMLD 126
Query: 111 ELI 113
+++
Sbjct: 127 DIV 129
Score = 44.3 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
+P G+VIG+GG+ +K + +TGA V+ + DP+ + ++ GSP Q+ A+
Sbjct: 348 IPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQL 407
Query: 109 IEELID 114
IEE I+
Sbjct: 408 IEEKIE 413
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 30 NENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDP 88
N NG G + E+ +P G+VIGKGG+ IK+LQ G ++ +Q ++
Sbjct: 143 NANGGQNGTVQEIM-------IPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTN 195
Query: 89 SDRRCMLSGSPDQVQEA 105
D+ + G P +VQ+A
Sbjct: 196 VDKPLRIIGDPYKVQQA 212
>gi|395750296|ref|XP_002828567.2| PREDICTED: far upstream element-binding protein 2 [Pongo abelii]
Length = 757
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I V VP+ +VGVVIG+ G+MIKK+QN+ G R+QF Q P ++ + G PD+ + A
Sbjct: 371 IDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGP-EKIAHIMGPPDRCEHAA 429
Query: 107 ARIEELIDSV 116
I +L+ S+
Sbjct: 430 RIINDLLQSL 439
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q ++G +VQ P +R L+G+P+ VQ+A+ ++
Sbjct: 197 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-ERSVSLTGAPESVQKAKMMLD 255
Query: 111 ELI 113
+++
Sbjct: 256 DIV 258
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 40 WEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCMLSG 97
W + +P G+VIG+GG+ +K + +TGA V+ + DP+ + ++ G
Sbjct: 466 WGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRG 525
Query: 98 SPDQVQEARARIEELID 114
SP Q+ A+ IEE I+
Sbjct: 526 SPQQIDHAKQLIEEKIE 542
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSDRRCMLSGSPDQVQE 104
V ++ +P G+VIGKGG+ IK+LQ G ++ +Q ++ D+ + G P +VQ+
Sbjct: 281 VQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQ 340
Query: 105 A 105
A
Sbjct: 341 A 341
>gi|62088904|dbj|BAD92899.1| KH-type splicing regulatory protein (FUSE binding protein 2)
variant [Homo sapiens]
Length = 384
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I V VP+ +VGVVIG+ G+MIKK+QN+ G R+QF Q P ++ + G PD+ + A
Sbjct: 143 IDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGP-EKIAHIMGPPDRCEHAA 201
Query: 107 ARIEELIDSV 116
I +L+ S+
Sbjct: 202 RIINDLLQSL 211
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 40 WEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCMLSG 97
W + +P G+VIG+GG+ +K + +TGA V+ + DP+ + ++ G
Sbjct: 238 WGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRG 297
Query: 98 SPDQVQEARARIEELID 114
SP Q+ A+ IEE I+
Sbjct: 298 SPQQIDHAKQLIEEKIE 314
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSDRRCMLSGSPDQVQE 104
V ++ +P G+VIGKGG+ IK+LQ G ++ +Q ++ D+ + G P +VQ+
Sbjct: 53 VQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQ 112
Query: 105 A 105
A
Sbjct: 113 A 113
>gi|198285561|gb|ACH85319.1| far upstream element (FUSE) binding protein 3 [Salmo salar]
Length = 302
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 5/73 (6%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQ 103
+ V VP+ AVG++IG+ G+MIKK+Q ++G R+QF + DD +R + G PD+ Q
Sbjct: 36 TLDVAVPRFAVGIIIGRSGEMIKKIQADSGVRIQF---KPDDGISPERIAQVMGQPDRCQ 92
Query: 104 EARARIEELIDSV 116
A I ELI +
Sbjct: 93 HAVHLINELIQTA 105
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ--MREDDPSDRRCM 94
GG+ EVT+ +P G+VIGKGGD IK + ++GA V+ + DP+ R
Sbjct: 133 GGLQEVTY-----TIPADKCGLVIGKGGDTIKSINQQSGAHVELQRNPPHNTDPNVRIFS 187
Query: 95 LSGSPDQVQEARARIEELI 113
+ G+P Q++ AR I++ I
Sbjct: 188 IRGTPQQMELARQLIDDKI 206
>gi|351713497|gb|EHB16416.1| Far upstream element-binding protein 2, partial [Heterocephalus
glaber]
Length = 522
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I V VP+ +VGVVIG+ G+MIKK+QN+ G R+QF Q P ++ + G PD+ + A
Sbjct: 244 IDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGP-EKIAHIMGPPDRCEHAA 302
Query: 107 ARIEELIDSV 116
I +L+ S+
Sbjct: 303 RIINDLLQSL 312
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q ++G +VQ P +R L+G+P+ VQ+A+ ++
Sbjct: 69 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-ERSVSLTGAPESVQKAKMMLD 127
Query: 111 ELI 113
+++
Sbjct: 128 DIV 130
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 40 WEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCMLSG 97
W + +P G+VIG+GG+ +K + +TGA V+ + DP+ + ++ G
Sbjct: 339 WGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRG 398
Query: 98 SPDQVQEARARIEELID 114
SP Q+ A+ IEE I+
Sbjct: 399 SPQQIDHAKQLIEEKIE 415
Score = 39.3 bits (90), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSDRRCMLSGSPDQVQEA 105
++ +P G+VIGKGG+ IK+LQ G ++ +Q ++ D+ + G P +VQ+A
Sbjct: 156 EIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQA 214
>gi|149716720|ref|XP_001496194.1| PREDICTED: far upstream element-binding protein 2 [Equus caballus]
Length = 667
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ+ I R D G + NE G GG I V VP+ +VGVVIG+ G+M
Sbjct: 213 QQACEMVMDILRERDQ-GGFGDRNEYGSRIGGG-------IDVPVPRHSVGVVIGRSGEM 264
Query: 67 IKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+QN+ G R+QF Q P ++ + G PD+ + A I +L+ S+
Sbjct: 265 IKKIQNDAGVRIQFKQDDGTGP-EKIAHIMGPPDRCEHAARIINDLLQSL 313
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q ++G +VQ P +R L+G+P+ VQ+A+ ++
Sbjct: 71 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-ERSVSLTGAPESVQKAKMMLD 129
Query: 111 ELI 113
+++
Sbjct: 130 DIV 132
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
+P G+VIG+GG+ +K + +TGA V+ + DP+ + ++ GSP Q+ A+
Sbjct: 351 IPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQL 410
Query: 109 IEELID 114
IEE I+
Sbjct: 411 IEEKIE 416
Score = 40.8 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 30 NENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDP 88
N NG G + E+ +P G+VIGKGG+ IK+LQ G ++ +Q ++
Sbjct: 146 NANGGQNGTVQEIM-------IPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTN 198
Query: 89 SDRRCMLSGSPDQVQEA 105
D+ + G P +VQ+A
Sbjct: 199 VDKPLRIIGDPYKVQQA 215
>gi|403296273|ref|XP_003939037.1| PREDICTED: far upstream element-binding protein 2, partial [Saimiri
boliviensis boliviensis]
Length = 644
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ+ I R D G + NE G GG I V VP+ +VGVVIG+ G+M
Sbjct: 226 QQACEMVMDILRERDQ-GGFGDRNEYGSRIGGG-------IDVPVPRHSVGVVIGRSGEM 277
Query: 67 IKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+QN+ G R+QF Q P ++ + G PD+ + A I +L+ S+
Sbjct: 278 IKKIQNDAGVRIQFKQDDGTGP-EKIAHIMGPPDRCEHAARIINDLLQSL 326
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q ++G +VQ P +R L+G+P+ VQ+A+ ++
Sbjct: 84 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-ERSVSLTGAPESVQKAKMMLD 142
Query: 111 ELI 113
+++
Sbjct: 143 DIV 145
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
+P G+VIG+GG+ +K + +TGA V+ + DP+ + ++ GSP Q+ A+
Sbjct: 364 IPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQL 423
Query: 109 IEELID 114
IEE I+
Sbjct: 424 IEEKIE 429
Score = 40.8 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 30 NENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDP 88
N NG G + E+ +P G+VIGKGG+ IK+LQ G ++ +Q ++
Sbjct: 159 NANGGQNGTVQEIM-------IPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTN 211
Query: 89 SDRRCMLSGSPDQVQEA 105
D+ + G P +VQ+A
Sbjct: 212 VDKPLRIIGDPYKVQQA 228
>gi|355703041|gb|EHH29532.1| hypothetical protein EGK_09989, partial [Macaca mulatta]
Length = 625
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I V VP+ +VGVVIG+ G+MIKK+QN+ G R+QF Q P ++ + G PD+ + A
Sbjct: 242 IDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGP-EKIAHIMGPPDRCEHAA 300
Query: 107 ARIEELIDSV 116
I +L+ S+
Sbjct: 301 RIINDLLQSL 310
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q ++G +VQ P +R L+G+P+ VQ+A+ ++
Sbjct: 68 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-ERSVSLTGAPESVQKAKMMLD 126
Query: 111 ELI 113
+++
Sbjct: 127 DIV 129
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 40 WEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCMLSG 97
W + +P G+VIG+GG+ +K + +TGA V+ + DP+ + ++ G
Sbjct: 337 WGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRG 396
Query: 98 SPDQVQEARARIEELID 114
SP Q+ A+ IEE I+
Sbjct: 397 SPQQIDHAKQLIEEKIE 413
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 24 GNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ- 82
G +F++N +G V ++ +P G+VIGKGG+ IK+LQ G ++ +Q
Sbjct: 135 GPPGQFHDNANGG-----QNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQD 189
Query: 83 MREDDPSDRRCMLSGSPDQVQEA 105
++ D+ + G P +VQ+A
Sbjct: 190 GSQNTNVDKPLRIIGDPYKVQQA 212
>gi|426230667|ref|XP_004009386.1| PREDICTED: far upstream element-binding protein 2 [Ovis aries]
Length = 484
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I V VP+ +VGVVIG+ G+MIKK+QN+ G R+QF Q P ++ + G PD+ + A
Sbjct: 245 IDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGP-EKIAHIMGPPDRCEHAA 303
Query: 107 ARIEELIDSV 116
I +L+ S+
Sbjct: 304 RIINDLLQSL 313
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q ++G +VQ P +R L+G+P+ VQ+A+ ++
Sbjct: 71 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-ERSVSLTGAPESVQKAKMMLD 129
Query: 111 ELI 113
+++
Sbjct: 130 DIV 132
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 40 WEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCMLSG 97
W + +P G+VIG+GG+ +K + +TGA V+ + DP+ + ++ G
Sbjct: 340 WGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRG 399
Query: 98 SPDQVQEARARIEELID 114
SP Q+ A+ IEE I+
Sbjct: 400 SPQQIDHAKQLIEEKIE 416
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 24 GNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ- 82
G +F++N +G V ++ +P G+VIGKGG+ IK+LQ G ++ +Q
Sbjct: 138 GPPGQFHDNANG-----GQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQD 192
Query: 83 MREDDPSDRRCMLSGSPDQVQEA 105
++ D+ + G P +VQ+A
Sbjct: 193 GSQNTNVDKPLRIIGDPYKVQQA 215
>gi|281339770|gb|EFB15354.1| hypothetical protein PANDA_017644 [Ailuropoda melanoleuca]
Length = 481
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I V VP+ +VGVVIG+ G+MIKK+QN+ G R+QF Q P ++ + G PD+ + A
Sbjct: 242 IDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGP-EKIAHIMGPPDRCEHAA 300
Query: 107 ARIEELIDSV 116
I +L+ S+
Sbjct: 301 RIINDLLQSL 310
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q ++G +VQ P +R L+G+P+ VQ+A+ ++
Sbjct: 68 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-ERSVSLTGAPESVQKAKMMLD 126
Query: 111 ELI 113
+++
Sbjct: 127 DIV 129
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 40 WEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCMLSG 97
W + +P G+VIG+GG+ +K + +TGA V+ + DP+ + ++ G
Sbjct: 337 WGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRG 396
Query: 98 SPDQVQEARARIEELID 114
SP Q+ A+ IEE I+
Sbjct: 397 SPQQIDHAKQLIEEKIE 413
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 24 GNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ- 82
G +F++N +G V ++ +P G+VIGKGG+ IK+LQ G ++ +Q
Sbjct: 135 GPPGQFHDNANGG-----QNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQD 189
Query: 83 MREDDPSDRRCMLSGSPDQVQEA 105
++ D+ + G P +VQ+A
Sbjct: 190 GSQNTNVDKPLRIIGDPYKVQQA 212
>gi|324502127|gb|ADY40937.1| Far upstream element-binding protein 1 [Ascaris suum]
Length = 341
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP+A+VG++IGKGG+ IK+L E+GA++QF + DR ++ G+ +Q+ +A I
Sbjct: 232 VPRASVGMIIGKGGETIKRLAAESGAKIQFKPDEDQTTPDRCAVIQGTTEQIAKATQFIS 291
Query: 111 ELIDSVMVEQFSGANFDKLRSTVLANRS 138
EL++ + +G+ + V AN++
Sbjct: 292 ELVN----KSGAGSGAEIFYMHVPANKT 315
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSD 90
+G GG ++T E++ +P A G+VIGKGG+ IK +Q + G ++ +Q +E
Sbjct: 116 DGGMSGGGRQITHEML---IPGAKCGLVIGKGGETIKNIQEQAGVKMVMIQETQESGGQP 172
Query: 91 RRCMLSGSPDQVQEARARIEELIDS 115
+ + G PD+V AR +E+++ S
Sbjct: 173 KPLRIIGEPDKVDTARRMVEDILQS 197
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLS 96
GG +V E I+V P VG+VIG+GG+ I ++Q+++ RVQ D + R+C L
Sbjct: 28 GGAGDVLIETIEV--PDHCVGLVIGRGGEQISQIQSQSNCRVQM-SPESDGNNMRQCTLQ 84
Query: 97 GSPDQVQEARARIEELI 113
G+ V+ A++ I+++I
Sbjct: 85 GTKMAVERAKSMIQDVI 101
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 6/52 (11%)
Query: 29 FNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQF 80
N++G G G E+ + VP G+VIGKGG+ IK++ E+GA V+
Sbjct: 294 VNKSGAGSG------AEIFYMHVPANKTGLVIGKGGETIKQICAESGAHVEL 339
>gi|147906092|ref|NP_001080641.1| far upstream element (FUSE) binding protein 1 [Xenopus laevis]
gi|28278093|gb|AAH44277.1| Fubp1 protein [Xenopus laevis]
Length = 653
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 47/74 (63%), Gaps = 5/74 (6%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
E I V +P+ AVG+VIG+ G+MIKK+QN+ G R+QF + DD S +R ++G D
Sbjct: 264 EGIDVPIPRFAVGIVIGRSGEMIKKIQNDAGVRIQF---KPDDGSVPERIAQITGPQDGC 320
Query: 103 QEARARIEELIDSV 116
Q A I +L+ SV
Sbjct: 321 QHAAEIINDLLRSV 334
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q ++G ++Q P DR CML+GSPD VQ A+ ++
Sbjct: 95 VPDGMVGFIIGRGGEQISRIQQDSGCKIQIAPDSAGMP-DRSCMLTGSPDSVQAAKRLLD 153
Query: 111 ELID 114
++++
Sbjct: 154 QIVE 157
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%), Gaps = 7/72 (9%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP----SDRRCMLSGSPDQ 101
V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q D P +D+ ++G P +
Sbjct: 175 VQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQ---DGPQNTGADKPLRIAGDPYK 231
Query: 102 VQEARARIEELI 113
VQ+A+ + ELI
Sbjct: 232 VQQAKEMVLELI 243
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCM 94
GG+ E + VP G++IGKGG+ IK + +GAR++ + DP+ +
Sbjct: 362 GGLQEFNF-----VVPTVKTGLIIGKGGETIKNISQTSGARIELQRNPPPNADPNVKLFT 416
Query: 95 LSGSPDQVQEARARIEELI 113
+ GSP Q+ AR +EE I
Sbjct: 417 IRGSPQQIDYARQLVEEKI 435
>gi|393911660|gb|EJD76408.1| KH domain-containing protein [Loa loa]
Length = 635
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 48/67 (71%), Gaps = 2/67 (2%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRC-MLSGSPDQVQEAR 106
+V VP+A+VG++IGKGG+ IK+L E+GA++QF + +D + RC ++ G+ +Q+ +A
Sbjct: 277 EVIVPRASVGMIIGKGGETIKRLAAESGAKIQF-KPDDDQTTQERCAVIQGTAEQIAKAT 335
Query: 107 ARIEELI 113
I EL+
Sbjct: 336 QFISELV 342
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Query: 24 GNMREFNENGDGRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFV 81
GN N G GG+ T I ++ +P A G+VIGKGG+ IK +Q +TG ++ +
Sbjct: 157 GNRPPPNRTGHFDGGIPVGTGRQITQEMFIPGAKCGLVIGKGGETIKNIQEQTGVKMVMI 216
Query: 82 QMREDDPSDRRCM-LSGSPDQVQEARARIEELIDS 115
Q ++ + + ++G P++V+ AR +EE++ S
Sbjct: 217 QENQESGGQPKPLRITGDPEKVENARRMVEEILQS 251
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLS 96
G + EV E ++V P VG+VIG+GG+ I ++Q++T RVQ + D + R+C L
Sbjct: 80 GSVGEVVMETMEV--PDHCVGLVIGRGGEQISQIQSQTNCRVQ-MSPESDGNNMRQCTLQ 136
Query: 97 GSPDQVQEARARIEELI 113
GS V ARA I E+I
Sbjct: 137 GSKMSVDRARAMINEVI 153
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E+ + VP G+VIGKGG+ IK++ E+GA V+ + + S++ ++ G+P Q+
Sbjct: 352 EMFYMHVPSNKTGLVIGKGGETIKQICAESGAHVELSRDPPPNASEKVFIIKGTPYQIHH 411
Query: 105 A----RARIEELIDSVMVEQF 121
A R ++ ++ V QF
Sbjct: 412 AQHIIRIKVGDIAPGTPVPQF 432
>gi|213512410|ref|NP_001133499.1| Far upstream element-binding protein 3 [Salmo salar]
gi|209154246|gb|ACI33355.1| Far upstream element-binding protein 3 [Salmo salar]
Length = 557
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 45/72 (62%), Gaps = 5/72 (6%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
+ V VP+ AVG+VIG+ G+MIKK+QN++G R+QF + DD DR + G D+ Q
Sbjct: 260 LDVAVPRFAVGIVIGRNGEMIKKIQNDSGVRIQF---KPDDGISPDRIAQVMGQSDRCQH 316
Query: 105 ARARIEELIDSV 116
A I EL+ +
Sbjct: 317 AVHLINELVQTA 328
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 7/86 (8%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--- 88
NG G + + ++ +P + VG+VIGKGGD IK+LQ TG ++ +Q D P
Sbjct: 154 NGPGFHSEMDSNSAIQEILIPASKVGLVIGKGGDTIKQLQERTGVKMMMIQ---DGPMPT 210
Query: 89 -SDRRCMLSGSPDQVQEARARIEELI 113
+D+ ++G P +VQ+AR + E+I
Sbjct: 211 GADKPLRITGDPYKVQQARELVVEII 236
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q + DR C L+GSP+ +++A+ +
Sbjct: 88 VPDKMVGFIIGRGGEQITRIQLESGCKIQ-IAADSGGMMDRACTLTGSPENIEQAKRLLS 146
Query: 111 ELID 114
+++D
Sbjct: 147 QIVD 150
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ--MREDDPSDRRCM 94
GG+ EVT+ +P G+VIGKGG+ IK + ++GA V+ + DP+ R
Sbjct: 356 GGLQEVTY-----SIPADKCGLVIGKGGETIKNINQQSGAHVELQRNPPPNTDPNVRIFS 410
Query: 95 LSGSPDQVQEARARIEELI 113
+ G+ Q++ AR I+E I
Sbjct: 411 IRGTHQQMEMARQLIDEKI 429
>gi|334311844|ref|XP_001369630.2| PREDICTED: far upstream element-binding protein 3 [Monodelphis
domestica]
Length = 574
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
I+V VP+ AVG+VIG+ G+MIKK+QN+ G R+QF + DD +R + G P++ Q
Sbjct: 258 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQF---KPDDGISPERVAQVMGLPERCQH 314
Query: 105 ARARIEELI 113
A I +LI
Sbjct: 315 AAHVISDLI 323
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 45/70 (64%), Gaps = 7/70 (10%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP----SDRRCMLSGSPDQVQ 103
++ +P + VG+VIGKGG+ IK+LQ TG ++ +Q D P +D+ ++G P +VQ
Sbjct: 168 EILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQ---DGPLPTGADKPLRITGDPFKVQ 224
Query: 104 EARARIEELI 113
+AR + E+I
Sbjct: 225 QAREMVLEII 234
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 52/103 (50%), Gaps = 15/103 (14%)
Query: 21 DNFGNMREFNENGDGR--------GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQN 72
D FG++ G GR GG+ EVT+ VP G+VIGKGG+ IK +
Sbjct: 330 DGFGSLSVPRGRGRGRSDWSIGAPGGLQEVTY-----TVPADKCGLVIGKGGENIKSINQ 384
Query: 73 ETGARVQFVQ--MREDDPSDRRCMLSGSPDQVQEARARIEELI 113
++GA V+ + DPS R + G P Q++ AR I+E +
Sbjct: 385 QSGAHVELQRNPPPNTDPSVRIFTIRGVPQQIELARHLIDEKV 427
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R C+L+G+P+ +++A+ +
Sbjct: 86 VPDKMVGFIIGRGGEQISRIQAESGCKIQIAPESSGIP-ERPCVLTGTPESIEQAKRLLG 144
Query: 111 ELID 114
+++D
Sbjct: 145 QIVD 148
>gi|296081618|emb|CBI20623.3| unnamed protein product [Vitis vinifera]
Length = 479
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 51/80 (63%), Gaps = 6/80 (7%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSD--RRCMLSGSPDQVQEA 105
++ +P VGV+IGKGG+ IK LQ ++GA++Q + + DP+ R L G+PDQ+
Sbjct: 139 KIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPTRLVELMGTPDQI--- 195
Query: 106 RARIEELIDSVMVEQFSGAN 125
A+ E+LI+ V+ E +G +
Sbjct: 196 -AKAEQLINDVLSEAEAGGS 214
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMR---EDDPSDRRCMLSGSPDQVQEARA 107
VP VG++IGKGG+ IK +Q TGAR+Q + + D +R + G+ +Q++ A+
Sbjct: 234 VPNNKVGLIIGKGGETIKNMQARTGARIQVIPLHLPPGDTSMERTVQIDGTSEQIESAKQ 293
Query: 108 RIEELI 113
+ E+I
Sbjct: 294 LVNEVI 299
>gi|395506297|ref|XP_003757471.1| PREDICTED: far upstream element-binding protein 3 [Sarcophilus
harrisii]
Length = 623
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
I+V VP+ AVG+VIG+ G+MIKK+QN+ G R+QF + DD +R + G P++ Q
Sbjct: 307 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQF---KPDDGISPERVAQVMGLPERCQH 363
Query: 105 ARARIEELI 113
A I +LI
Sbjct: 364 AAHVISDLI 372
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 45/70 (64%), Gaps = 7/70 (10%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP----SDRRCMLSGSPDQVQ 103
++ +P + VG+VIGKGG+ IK+LQ TG ++ +Q D P +D+ ++G P +VQ
Sbjct: 217 EILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQ---DGPLPTGADKPLRITGDPFKVQ 273
Query: 104 EARARIEELI 113
+AR + E+I
Sbjct: 274 QAREMVLEII 283
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 52/103 (50%), Gaps = 15/103 (14%)
Query: 21 DNFGNMREFNENGDGR--------GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQN 72
D FG++ G GR GG+ EVT+ VP G+VIGKGG+ IK +
Sbjct: 379 DGFGSLSVPRGRGRGRSDWSVGAPGGLQEVTY-----TVPADKCGLVIGKGGENIKSINQ 433
Query: 73 ETGARVQFVQ--MREDDPSDRRCMLSGSPDQVQEARARIEELI 113
++GA V+ + DPS R + G P Q++ AR I+E +
Sbjct: 434 QSGAHVELQRNPPPNTDPSVRIFTIRGIPQQIELARHLIDEKV 476
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R C+L+G+P+ +++A+ +
Sbjct: 135 VPDKMVGFIIGRGGEQISRIQAESGCKIQIAPESSGIP-ERPCVLTGTPESIEQAKRLLG 193
Query: 111 ELID 114
+++D
Sbjct: 194 QIVD 197
>gi|225429462|ref|XP_002278761.1| PREDICTED: uncharacterized protein LOC100259454 [Vitis vinifera]
Length = 690
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 51/80 (63%), Gaps = 6/80 (7%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSD--RRCMLSGSPDQVQEA 105
++ +P VGV+IGKGG+ IK LQ ++GA++Q + + DP+ R L G+PDQ+
Sbjct: 139 KIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPTRLVELMGTPDQI--- 195
Query: 106 RARIEELIDSVMVEQFSGAN 125
A+ E+LI+ V+ E +G +
Sbjct: 196 -AKAEQLINDVLSEAEAGGS 214
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMR---EDDPSDRRCMLSGSPDQVQEARA 107
VP VG++IGKGG+ IK +Q TGAR+Q + + D +R + G+ +Q++ A+
Sbjct: 234 VPNNKVGLIIGKGGETIKNMQARTGARIQVIPLHLPPGDTSMERTVQIDGTSEQIESAKQ 293
Query: 108 RIEELI 113
+ E+I
Sbjct: 294 LVNEVI 299
>gi|344306102|ref|XP_003421728.1| PREDICTED: far upstream element-binding protein 2-like [Loxodonta
africana]
Length = 766
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 55/99 (55%), Gaps = 11/99 (11%)
Query: 18 RNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGAR 77
R+ FG+ NE G GG I V VP+ +VGVVIG+ G+MIKK+QN+ G R
Sbjct: 276 RDQGGFGDR---NEYGSRIGGG-------IDVPVPRHSVGVVIGRSGEMIKKIQNDAGVR 325
Query: 78 VQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELIDSV 116
+QF Q P ++ + G PD+ + A I +L+ S+
Sbjct: 326 IQFKQDDGTGP-EKIAHIMGPPDRCEHAARIINDLLQSL 363
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q ++G +VQ P +R L+G+P+ VQ+A+ ++
Sbjct: 121 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-ERSVSLTGAPESVQKAKMMLD 179
Query: 111 ELI 113
+++
Sbjct: 180 DIV 182
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCMLSGSPDQVQEARAR 108
+P G+VIG+GG+ +K + +TGA V+ + DP+ + ++ GSP Q+ A+
Sbjct: 401 IPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQL 460
Query: 109 IEELID 114
IEE I+
Sbjct: 461 IEEKIE 466
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSDRRCMLSGSPDQVQE 104
V ++ +P G+VIGKGG+ IK+LQ G ++ +Q ++ D+ + G P +VQ+
Sbjct: 205 VQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGAQNTNVDKPLRIIGDPYKVQQ 264
Query: 105 A 105
A
Sbjct: 265 A 265
>gi|170574714|ref|XP_001892930.1| KH domain containing protein [Brugia malayi]
gi|158601280|gb|EDP38236.1| KH domain containing protein [Brugia malayi]
Length = 614
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 45/66 (68%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
+V VP+A+VG++IGKGG+ IK+L E+GA++QF + +R ++ G+ +Q+ +A
Sbjct: 262 EVIVPRASVGMIIGKGGETIKRLAAESGAKIQFKPDNDQTAQERCAVIQGTAEQIAKATQ 321
Query: 108 RIEELI 113
I EL+
Sbjct: 322 FISELV 327
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Query: 24 GNMREFNENGDGRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFV 81
GN N G GG+ T I ++ +P A G+VIGKGG+ IK +Q +TG ++ +
Sbjct: 142 GNRPPPNRAGHFDGGIPVGTGRQITQEMFIPGAKCGLVIGKGGETIKNIQEQTGVKMVMI 201
Query: 82 QMREDDPSDRRCM-LSGSPDQVQEARARIEELIDS 115
Q ++ + + ++G P++V+ AR +EE++ S
Sbjct: 202 QENQESGGQPKPLRITGDPEKVENARRMVEEILQS 236
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E+ + VP G+VIGKGG+ IK++ E+GA V+ + + S++ ++ G+P Q+
Sbjct: 337 EMFYMHVPSNKTGLVIGKGGETIKQICAESGAHVELSRDPPPNASEKVFIIKGTPYQIHH 396
Query: 105 A----RARIEELIDSVMVEQF 121
A R ++ ++ V QF
Sbjct: 397 AQHIIRIKVGDIAPGTPVPQF 417
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 43 TWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQV 102
T EV CV +G VIG+GG+ I ++Q++T RVQ + D + R+C L GS V
Sbjct: 72 TMEVPDHCV---GLGNVIGRGGEQISQIQSQTNCRVQ-MSPESDGNNVRQCTLQGSKMSV 127
Query: 103 QEARARIEELI 113
ARA I E+I
Sbjct: 128 DRARAMINEVI 138
>gi|312067348|ref|XP_003136700.1| KH domain-containing protein [Loa loa]
Length = 571
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 48/67 (71%), Gaps = 2/67 (2%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRC-MLSGSPDQVQEAR 106
+V VP+A+VG++IGKGG+ IK+L E+GA++QF + +D + RC ++ G+ +Q+ +A
Sbjct: 213 EVIVPRASVGMIIGKGGETIKRLAAESGAKIQF-KPDDDQTTQERCAVIQGTAEQIAKAT 271
Query: 107 ARIEELI 113
I EL+
Sbjct: 272 QFISELV 278
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E+ + VP G+VIGKGG+ IK++ E+GA V+ + + S++ ++ G+P Q+
Sbjct: 288 EMFYMHVPSNKTGLVIGKGGETIKQICAESGAHVELSRDPPPNASEKVFIIKGTPYQIHH 347
Query: 105 A----RARIEELIDSVMVEQF 121
A R ++ ++ V QF
Sbjct: 348 AQHIIRIKVGDIAPGTPVPQF 368
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLS 96
G + EV E ++V +G VIG+GG+ I ++Q++T RVQ + D + R+C L
Sbjct: 27 GSVGEVVMETMEVPDHCVGLGNVIGRGGEQISQIQSQTNCRVQ-MSPESDGNNMRQCTLQ 85
Query: 97 GSPDQVQEARARIEELI 113
GS V ARA I E+I
Sbjct: 86 GSKMSVDRARAMINEVI 102
>gi|393911661|gb|EJD76409.1| KH domain-containing protein, variant [Loa loa]
Length = 582
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 48/67 (71%), Gaps = 2/67 (2%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRC-MLSGSPDQVQEAR 106
+V VP+A+VG++IGKGG+ IK+L E+GA++QF + +D + RC ++ G+ +Q+ +A
Sbjct: 224 EVIVPRASVGMIIGKGGETIKRLAAESGAKIQF-KPDDDQTTQERCAVIQGTAEQIAKAT 282
Query: 107 ARIEELI 113
I EL+
Sbjct: 283 QFISELV 289
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Query: 24 GNMREFNENGDGRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFV 81
GN N G GG+ T I ++ +P A G+VIGKGG+ IK +Q +TG ++ +
Sbjct: 104 GNRPPPNRTGHFDGGIPVGTGRQITQEMFIPGAKCGLVIGKGGETIKNIQEQTGVKMVMI 163
Query: 82 QMREDDPSDRRCM-LSGSPDQVQEARARIEELIDS 115
Q ++ + + ++G P++V+ AR +EE++ S
Sbjct: 164 QENQESGGQPKPLRITGDPEKVENARRMVEEILQS 198
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLS 96
G + EV E ++V P VG+VIG+GG+ I ++Q++T RVQ + D + R+C L
Sbjct: 27 GSVGEVVMETMEV--PDHCVGLVIGRGGEQISQIQSQTNCRVQ-MSPESDGNNMRQCTLQ 83
Query: 97 GSPDQVQEARARIEELI 113
GS V ARA I E+I
Sbjct: 84 GSKMSVDRARAMINEVI 100
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E+ + VP G+VIGKGG+ IK++ E+GA V+ + + S++ ++ G+P Q+
Sbjct: 299 EMFYMHVPSNKTGLVIGKGGETIKQICAESGAHVELSRDPPPNASEKVFIIKGTPYQIHH 358
Query: 105 A----RARIEELIDSVMVEQF 121
A R ++ ++ V QF
Sbjct: 359 AQHIIRIKVGDIAPGTPVPQF 379
>gi|19424312|ref|NP_598286.1| far upstream element-binding protein 2 [Rattus norvegicus]
gi|37078084|sp|Q99PF5.1|FUBP2_RAT RecName: Full=Far upstream element-binding protein 2;
Short=FUSE-binding protein 2; AltName: Full=KH
type-splicing regulatory protein; Short=KSRP; AltName:
Full=MAP2 RNA trans-acting protein 1; Short=MARTA1
gi|12584134|gb|AAG59811.1|AF308818_1 MAP2 RNA trans-acting protein MARTA1 [Rattus norvegicus]
Length = 721
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ+ I R D G + NE G GG I V VP+ +VGVVIG+ G+M
Sbjct: 294 QQACEMVMDILRERDQ-GGFGDRNEYGSRVGGG-------IDVPVPRHSVGVVIGRSGEM 345
Query: 67 IKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+QN+ G R+QF Q P ++ + G PD+ + A I +L+ S+
Sbjct: 346 IKKIQNDAGVRIQFKQDDGTGP-EKIAHIMGPPDRCEHAARIINDLLQSL 394
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q ++G +VQ P +R L+G+P+ VQ+A+ ++
Sbjct: 152 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-ERSVSLTGAPESVQKAKMMLD 210
Query: 111 ELI 113
+++
Sbjct: 211 DIV 213
Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
+P G+VIG+GG+ +K + +TGA V+ + DP+ + ++ GSP Q+ A+
Sbjct: 432 IPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFVIRGSPQQIDHAKQL 491
Query: 109 IEELID 114
IEE I+
Sbjct: 492 IEEKIE 497
Score = 40.8 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 30 NENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDP 88
N NG G + E+ +P G+VIGKGG+ IK+LQ G ++ +Q ++
Sbjct: 227 NANGGQNGTVQEIM-------IPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTN 279
Query: 89 SDRRCMLSGSPDQVQEA 105
D+ + G P +VQ+A
Sbjct: 280 VDKPLRIIGDPYKVQQA 296
>gi|89272465|emb|CAJ82621.1| fubp1 [Xenopus (Silurana) tropicalis]
Length = 653
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P DR CML+GSPD VQ A+ ++
Sbjct: 95 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGMP-DRSCMLTGSPDSVQAAKRLLD 153
Query: 111 ELID 114
++++
Sbjct: 154 QIVE 157
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 55/96 (57%), Gaps = 11/96 (11%)
Query: 24 GNMREF-NENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ 82
G RE NE G GG E I V +P+ AVG+VIG+ G+MIKK+QN+ G R+QF
Sbjct: 247 GGFREIRNEYGSRIGGN-----EGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQF-- 299
Query: 83 MREDDPS--DRRCMLSGSPDQVQEARARIEELIDSV 116
+ DD S +R ++G + Q A I +L+ SV
Sbjct: 300 -KPDDGSTPERIAQITGPQHRCQHAAEIINDLLRSV 334
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%), Gaps = 7/72 (9%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP----SDRRCMLSGSPDQ 101
V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q D P +D+ ++G P +
Sbjct: 175 VQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQ---DGPQNTGADKPLRIAGDPYK 231
Query: 102 VQEARARIEELI 113
VQ+A+ + ELI
Sbjct: 232 VQQAKEMVLELI 243
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCM 94
GG+ E + VP G++IGKGG+ IK + ++GAR++ + DP+ +
Sbjct: 362 GGLQEFNF-----VVPTVKTGLIIGKGGETIKNISQQSGARIELQRNPPPNADPNVKLFT 416
Query: 95 LSGSPDQVQEARARIEELI 113
+ GSP Q+ AR +EE I
Sbjct: 417 IRGSPQQIDYARQLVEEKI 435
>gi|297825693|ref|XP_002880729.1| hypothetical protein ARALYDRAFT_481452 [Arabidopsis lyrata subsp.
lyrata]
gi|297326568|gb|EFH56988.1| hypothetical protein ARALYDRAFT_481452 [Arabidopsis lyrata subsp.
lyrata]
Length = 634
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/78 (39%), Positives = 50/78 (64%), Gaps = 6/78 (7%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQEA 105
++ +P VGV+IGKGG+ IK LQ ++GA++Q + + DP + R L+G+PDQ+ +A
Sbjct: 137 KIDIPNMRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNATTRTVDLTGTPDQISKA 196
Query: 106 RARIEELIDSVMVEQFSG 123
E+LI V+ E +G
Sbjct: 197 ----EQLITDVLQEAEAG 210
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMR--EDDPSDRRCM-LSGSPDQVQEARA 107
+P VG++IGKGG+ IK +Q +TGAR+Q + + DP+ R + + G +Q++ A+
Sbjct: 235 IPNNKVGLIIGKGGETIKSMQAKTGARIQVIPLHLPPGDPTPERTLQIDGITEQIEHAKQ 294
Query: 108 RIEELI 113
+ E+I
Sbjct: 295 LVNEII 300
>gi|402594179|gb|EJW88105.1| KH domain-containing protein [Wuchereria bancrofti]
Length = 581
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 48/67 (71%), Gaps = 2/67 (2%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRC-MLSGSPDQVQEAR 106
+V VP+A+VG++IGKGG+ IK+L E+GA++QF + +D + RC ++ G+ +Q+ +A
Sbjct: 226 EVIVPRASVGMIIGKGGETIKRLAAESGAKIQF-KPDDDQTAQERCAVIQGTAEQIAKAT 284
Query: 107 ARIEELI 113
I EL+
Sbjct: 285 QFISELV 291
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Query: 24 GNMREFNENGDGRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFV 81
GN N G GG+ T I ++ +P A G+VIGKGG+ IK +Q +TG ++ +
Sbjct: 106 GNRPPPNRAGHFDGGIPVGTGRQITQEMFIPGAKCGLVIGKGGETIKNIQEQTGVKMVMI 165
Query: 82 QMREDDPSDRRCM-LSGSPDQVQEARARIEELIDS 115
Q ++ + + ++G P++V+ AR +EE++ S
Sbjct: 166 QENQESGGQPKPLRITGDPEKVENARRMVEEILQS 200
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E+ + VP G+VIGKGG+ IK++ E+GA V+ + + S++ ++ G+P Q+
Sbjct: 301 EMFYMHVPSNKTGLVIGKGGETIKQICAESGAHVELSRDPPPNASEKVFIIKGTPYQIHH 360
Query: 105 A----RARIEELIDSVMVEQF 121
A R ++ ++ V QF
Sbjct: 361 AQHIIRIKVGDIAPGTPVPQF 381
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 43 TWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQV 102
T EV CV +G VIG+GG+ I ++Q++T RVQ + D + R+C L GS V
Sbjct: 36 TMEVPDHCV---GLGNVIGRGGEQISQIQSQTNCRVQ-MSPESDGNNMRQCTLQGSKMSV 91
Query: 103 QEARARIEELI 113
ARA I E+I
Sbjct: 92 DRARAMINEVI 102
>gi|170573376|ref|XP_001892446.1| KH domain containing protein [Brugia malayi]
gi|158602012|gb|EDP38733.1| KH domain containing protein [Brugia malayi]
Length = 579
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 48/67 (71%), Gaps = 2/67 (2%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRC-MLSGSPDQVQEAR 106
+V VP+A+VG++IGKGG+ IK+L E+GA++QF + +D + RC ++ G+ +Q+ +A
Sbjct: 224 EVIVPRASVGMIIGKGGETIKRLAAESGAKIQF-KPDDDQTAQERCAVIQGTAEQIAKAT 282
Query: 107 ARIEELI 113
I EL+
Sbjct: 283 QFISELV 289
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Query: 24 GNMREFNENGDGRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFV 81
GN N G GG+ T I ++ +P A G+VIGKGG+ IK +Q +TG ++ +
Sbjct: 104 GNRPPPNRAGHFDGGIPVGTGRQITQEMFIPGAKCGLVIGKGGETIKNIQEQTGVKMVMI 163
Query: 82 QMREDDPSDRRCM-LSGSPDQVQEARARIEELIDS 115
Q ++ + + ++G P++V+ AR +EE++ S
Sbjct: 164 QENQESGGQPKPLRITGDPEKVENARRMVEEILQS 198
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPD 100
EV E ++V P VG+VIG+GG+ I ++Q++T RVQ + D + R+C L GS
Sbjct: 31 EVVMETMEV--PDHCVGLVIGRGGEQISQIQSQTNCRVQ-MSPESDGNNMRQCTLQGSKM 87
Query: 101 QVQEARARIEELI 113
V ARA I E+I
Sbjct: 88 SVDRARAMINEVI 100
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E+ + VP G+VIGKGG+ IK++ E+GA V+ + + S++ ++ G+P Q+
Sbjct: 299 EMFYMHVPSNKTGLVIGKGGETIKQICAESGAHVELSRDPPPNASEKVFIIKGTPYQIHH 358
Query: 105 A----RARIEELIDSVMVEQF 121
A R ++ ++ V QF
Sbjct: 359 AQHIIRIKVGDIAPGTPVPQF 379
>gi|411024259|pdb|4B8T|A Chain A, Rna Binding Protein Solution Structure Of The Third Kh
Domain Of Ksrp In Complex With The G-rich Target
Sequence
Length = 106
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I V VP+ +VGVVIG+ G+MIKK+QN+ G R+QF Q P ++ + G PD+ + A
Sbjct: 13 IDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGP-EKIAHIMGPPDRCEHAA 71
Query: 107 ARIEELIDSV 116
I +L+ S+
Sbjct: 72 RIINDLLQSL 81
>gi|356564071|ref|XP_003550280.1| PREDICTED: uncharacterized protein LOC100782717 [Glycine max]
Length = 672
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 6/80 (7%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSD--RRCMLSGSPDQVQEA 105
++ +P VGV+IGKGG+ IK LQ ++GA++Q + + DP+ R L GSPD + A
Sbjct: 127 KIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVELMGSPDAIATA 186
Query: 106 RARIEELIDSVMVEQFSGAN 125
E+LI+ V+ E +G +
Sbjct: 187 ----EKLINEVLAEAETGGS 202
Score = 55.1 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMR---EDDPSDRRCMLSGSPDQVQEARA 107
+P VG+VIGKGG+ IK +Q TGAR+Q + + D ++R + G+P+Q++ A+
Sbjct: 222 IPNNKVGLVIGKGGETIKNMQASTGARIQVIPLHLPPGDTSTERTLKIEGTPEQIESAKQ 281
Query: 108 RIEELI 113
+ ++I
Sbjct: 282 MVNQVI 287
>gi|356552330|ref|XP_003544521.1| PREDICTED: uncharacterized protein LOC100813135 [Glycine max]
Length = 670
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 6/80 (7%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSD--RRCMLSGSPDQVQEA 105
++ +P VGV+IGKGG+ IK LQ ++GA++Q + + DP+ R L GSPD + A
Sbjct: 125 KIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVELMGSPDAIATA 184
Query: 106 RARIEELIDSVMVEQFSGAN 125
E+LI+ V+ E +G +
Sbjct: 185 ----EKLINEVLAEAETGGS 200
Score = 55.1 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMR---EDDPSDRRCMLSGSPDQVQEARA 107
+P VG+VIGKGG+ IK +Q TGAR+Q + + D ++R + G+P+Q++ A+
Sbjct: 220 IPNNKVGLVIGKGGETIKNMQASTGARIQVIPLHLPPGDTSTERTLKIEGTPEQIESAKQ 279
Query: 108 RIEELI 113
+ ++I
Sbjct: 280 MVNQVI 285
>gi|147818796|emb|CAN67284.1| hypothetical protein VITISV_021596 [Vitis vinifera]
Length = 332
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 51/80 (63%), Gaps = 6/80 (7%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSD--RRCMLSGSPDQVQEA 105
++ +P VGV+IGKGG+ IK LQ ++GA++Q + + DP+ R L G+PDQ+
Sbjct: 100 KIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPTRLVELMGTPDQI--- 156
Query: 106 RARIEELIDSVMVEQFSGAN 125
A+ E+LI+ V+ E +G +
Sbjct: 157 -AKAEQLINDVLSEAEAGGS 175
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRE---DDPSDRRCMLSGSPDQVQEARA 107
VP VG++IGKGG+ IK +Q TGAR+Q + + D +R + G+ +Q++ A+
Sbjct: 195 VPNNKVGLIIGKGGETIKNMQARTGARIQVIPLHLPPGDTSMERTVQIDGTSEQIESAKQ 254
Query: 108 RIEELID 114
+ E+I
Sbjct: 255 LVNEVIS 261
>gi|224088888|ref|XP_002308575.1| predicted protein [Populus trichocarpa]
gi|222854551|gb|EEE92098.1| predicted protein [Populus trichocarpa]
Length = 242
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 52/80 (65%), Gaps = 6/80 (7%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSD--RRCMLSGSPDQVQEA 105
++ +P+ VGV+IGKGG+ IK LQ ++GA++Q + + DP+ R L G+P+Q+
Sbjct: 140 KIDIPQGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPTRMVELMGTPEQI--- 196
Query: 106 RARIEELIDSVMVEQFSGAN 125
A+ E+LI+ V+ E +G +
Sbjct: 197 -AKAEQLINDVLAEAEAGGS 215
>gi|149241965|pdb|2HH3|A Chain A, Solution Structure Of The Third Kh Domain Of Ksrp
Length = 106
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I V VP+ +VGVVIG+ G+MIKK+QN+ G R+QF Q P ++ + G PD+ + A
Sbjct: 13 IDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGP-EKIAHIMGPPDRCEHAA 71
Query: 107 ARIEELIDSV 116
I +L+ S+
Sbjct: 72 RIINDLLQSL 81
>gi|223673779|pdb|2JVZ|A Chain A, Solution Nmr Structure Of The Second And Third Kh Domains
Of Ksrp
Length = 164
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I V VP+ +VGVVIG+ G+MIKK+QN+ G R+QF Q P ++ + G PD+ + A
Sbjct: 93 IDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGP-EKIAHIMGPPDRCEHAA 151
Query: 107 ARIEELIDSV 116
I +L+ S+
Sbjct: 152 RIINDLLQSL 161
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSDRRCMLSGSPDQVQE 104
V ++ +P G+VIGKGG+ IK+LQ G ++ +Q ++ D+ + G P +VQ+
Sbjct: 3 VQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQ 62
Query: 105 A 105
A
Sbjct: 63 A 63
>gi|452989996|gb|EME89751.1| hypothetical protein MYCFIDRAFT_78468 [Pseudocercospora fijiensis
CIRAD86]
Length = 487
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 48/70 (68%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E + V VG++IG+ G+ ++K+++ETGARVQF+Q ++ ++R+C +SGS +
Sbjct: 141 ETETIRVKSGLVGLIIGRNGENLRKVESETGARVQFIQAKDSHVAERQCTISGSTRSREA 200
Query: 105 ARARIEELID 114
A+A I ++I+
Sbjct: 201 AKAAIFQIIE 210
Score = 42.4 bits (98), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ VP AVG++IGKGG+ IK +Q +G ++ Q + D + R L+GS ++EA
Sbjct: 364 IRVPSEAVGMIIGKGGETIKDMQRTSGCKINVNQPKPPDVT-RAIDLAGSARAMEEAERI 422
Query: 109 IEELIDSV 116
I E +++V
Sbjct: 423 IWEKVETV 430
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
Q+ VP VG++IG+GG+ IK LQ +G V V + R L GS A+
Sbjct: 247 QIMVPDKTVGLIIGRGGETIKDLQERSGCHVNIVGENKSVNGLRPVNLIGSERATAVAKE 306
Query: 108 RIEELIDS 115
I E+++S
Sbjct: 307 LILEIVES 314
>gi|395512937|ref|XP_003760689.1| PREDICTED: far upstream element-binding protein 2 [Sarcophilus
harrisii]
Length = 777
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 40/110 (36%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ+ I R D G + NE G GG I V VP+ +VGVVIG+ G+M
Sbjct: 324 QQACEMVMDILRERDQ-GGFGDRNEYGSRIGGG-------IDVPVPRHSVGVVIGRSGEM 375
Query: 67 IKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+Q++ G R+QF Q P ++ + G PD+ + A I +L+ S+
Sbjct: 376 IKKIQSDAGVRIQFKQDDGTGP-EKIAHIMGPPDRCEHAARIINDLLQSL 424
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q ++G +VQ P +R L+G+P+ VQ+A+ ++
Sbjct: 182 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-ERSVSLTGAPESVQKAKMMLD 240
Query: 111 ELI 113
+++
Sbjct: 241 DIV 243
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
+P G+VIG+GG+ +K + +TGA V+ + DP+ + ++ GSP Q+ A+
Sbjct: 462 IPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQL 521
Query: 109 IEELID 114
IEE I+
Sbjct: 522 IEEKIE 527
Score = 42.0 bits (97), Expect = 0.074, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 30 NENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDP 88
N NG G + E+ +P G+VIGKGG+ IK+LQ G ++ +Q ++
Sbjct: 257 NSNGGQNGTVQEIM-------IPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTN 309
Query: 89 SDRRCMLSGSPDQVQEARARIEELIDSVMVEQFSGANFDK 128
D+ + G P +VQ+A E++ ++ E+ G D+
Sbjct: 310 VDKPLRIIGDPYKVQQAC----EMVMDILRERDQGGFGDR 345
>gi|357465707|ref|XP_003603138.1| Far upstream element-binding protein [Medicago truncatula]
gi|355492186|gb|AES73389.1| Far upstream element-binding protein [Medicago truncatula]
Length = 1145
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/88 (38%), Positives = 53/88 (60%), Gaps = 6/88 (6%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM--LSGSPDQVQEA 105
++ +P VGV+IGKGG+ IK LQ ++GA++Q + + DP+ + M L G+PD V A
Sbjct: 89 KIEIPNGRVGVLIGKGGETIKYLQMQSGAKIQVTRDMDADPNSQTRMVELMGTPDAVSSA 148
Query: 106 RARIEELIDSVMVEQFSGANFDKLRSTV 133
E+LI+ V+ E +GA+ R V
Sbjct: 149 ----EKLINEVLAEAEAGASGGGTRRMV 172
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRE---DDPSDRRCMLSGSPDQVQEARA 107
+P VG++IGKGG+ IK +Q TGAR+Q + + D ++R + G+PDQ++ A+
Sbjct: 184 IPNNKVGLIIGKGGETIKSMQASTGARIQVIPLHPPPGDTSTERTLKIDGTPDQIESAKQ 243
Query: 108 RIEELI 113
+ +++
Sbjct: 244 LVNQIL 249
>gi|224142865|ref|XP_002324756.1| predicted protein [Populus trichocarpa]
gi|222866190|gb|EEF03321.1| predicted protein [Populus trichocarpa]
Length = 312
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 52/80 (65%), Gaps = 6/80 (7%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSD--RRCMLSGSPDQVQEA 105
++ VP+ VGV+IGKGG+ IK LQ ++GA++Q + + DP+ R L G+P+Q+
Sbjct: 140 KIDVPQGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPYRIVELMGTPEQI--- 196
Query: 106 RARIEELIDSVMVEQFSGAN 125
A+ E+LI+ V+ E +G +
Sbjct: 197 -AKAEQLINDVLAEADAGGS 215
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 13/94 (13%)
Query: 35 GRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMR---EDDPSDR 91
G+GG E + +P VG+VIGKGGD IK +Q +GAR+Q + + D ++R
Sbjct: 224 GQGG-----SEHFSMKIPNNKVGLVIGKGGDSIKNMQARSGARIQVIPLHLPPGDTSTER 278
Query: 92 RCMLSGSPDQVQEARARI-----EELIDSVMVEQ 120
+ G+ +QV+ A+ + EEL+ V++E
Sbjct: 279 TVHIEGTSEQVEAAKQLVNEVTSEELLPFVVLEH 312
>gi|356495760|ref|XP_003516741.1| PREDICTED: uncharacterized protein LOC100800173 [Glycine max]
Length = 793
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM---REDDPSDRRCMLSGSPDQ 101
E IQ+ VP VG++IG+GG+ IK LQ ++GAR+Q + DD +R ++G Q
Sbjct: 294 EQIQIQVPNEKVGLIIGRGGETIKSLQTKSGARIQLIPQHLPEGDDSKERTVQVTGDKRQ 353
Query: 102 VQEARARIEELID 114
++ A+ I+E+++
Sbjct: 354 IEIAQELIKEVMN 366
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 8/87 (9%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGS 98
E+T I+V P VGV+IGK GD I+ LQ +GA++Q + + DP + R L GS
Sbjct: 196 EITTRKIEV--PNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPLCATRSVELIGS 253
Query: 99 PDQVQEARARIEELIDSVMVEQFSGAN 125
+ + +A E+L+++V+ E +G +
Sbjct: 254 LESIDKA----EKLMNAVIAEADAGGS 276
>gi|74224349|dbj|BAE33750.1| unnamed protein product [Mus musculus]
Length = 748
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I V VP+ +VGVVIG+ G+MIKK+QN+ G R+QF Q P ++ + G PD+ + A
Sbjct: 326 IDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGP-EKIAHIMGPPDRCEHAA 384
Query: 107 ARIEELIDSV 116
+L+ S+
Sbjct: 385 RIFNDLLQSL 394
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q ++G +VQ P +R L+G+P+ VQ+A+ ++
Sbjct: 152 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-ERSVSLTGAPESVQKAKMMLD 210
Query: 111 ELI 113
+++
Sbjct: 211 DIV 213
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 40 WEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCMLSG 97
W + +P G+VIG+GG+ +K + +TGA V+ + DP+ + ++ G
Sbjct: 421 WGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFVIRG 480
Query: 98 SPDQVQEARARIEELID 114
SP Q+ A+ IEE I+
Sbjct: 481 SPQQIDHAKQLIEEKIE 497
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSDRRCMLSGSPDQVQE 104
V ++ +P G+VIGKGG+ IK+LQ G ++ +Q ++ D+ + G P +VQ+
Sbjct: 236 VQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQ 295
Query: 105 A 105
A
Sbjct: 296 A 296
>gi|15225229|ref|NP_180167.1| upstream element-binding protein [Arabidopsis thaliana]
gi|19310435|gb|AAL84954.1| F17H15.1/F17H15.1 [Arabidopsis thaliana]
gi|20197266|gb|AAM15002.1| unknown protein [Arabidopsis thaliana]
gi|20197368|gb|AAM15045.1| unknown protein [Arabidopsis thaliana]
gi|110741998|dbj|BAE98938.1| hypothetical protein [Arabidopsis thaliana]
gi|330252684|gb|AEC07778.1| upstream element-binding protein [Arabidopsis thaliana]
Length = 632
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/74 (40%), Positives = 48/74 (64%), Gaps = 6/74 (8%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQEA 105
++ +P VGV+IGKGG+ IK LQ ++GA++Q + + DP + R L+G+PDQ+ +A
Sbjct: 137 KIDIPNMRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNCATRTVDLTGTPDQISKA 196
Query: 106 RARIEELIDSVMVE 119
E+LI V+ E
Sbjct: 197 ----EQLITDVLQE 206
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMR--EDDPSDRRCM-LSGSPDQVQEARA 107
+P VG++IGKGG+ IK +Q +TGAR+Q + + DP+ R + + G +Q++ A+
Sbjct: 236 IPNNKVGLIIGKGGETIKSMQAKTGARIQVIPLHLPPGDPTPERTLQIDGITEQIEHAKQ 295
Query: 108 RIEELI 113
+ E+I
Sbjct: 296 LVNEII 301
>gi|255550830|ref|XP_002516463.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223544283|gb|EEF45804.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 306
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 6/74 (8%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSD--RRCMLSGSPDQVQEA 105
++ +P VGV+IGKGG+ IK LQ ++GA++Q + + DP+ R L G+PDQ+
Sbjct: 143 KIEIPNGRVGVIIGKGGETIKYLQIQSGAKIQVTRDMDADPNSPTRMVELMGNPDQI--- 199
Query: 106 RARIEELIDSVMVE 119
A+ E+LI V+ E
Sbjct: 200 -AKAEQLISEVLAE 212
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMR---EDDPSDRRCMLSGSPDQVQEARA 107
+P VG+VIGKGGD IK +Q TGAR+Q + + D +DR + G+ +Q++ A+
Sbjct: 238 IPNNKVGLVIGKGGDSIKNMQARTGARIQVIPLHLPPGDTSTDRNVHIEGTSEQIELAKQ 297
Query: 108 RIEELI 113
+ E I
Sbjct: 298 LVNEAI 303
>gi|1575607|gb|AAC50892.1| FUSE binding protein 2, partial [Homo sapiens]
Length = 652
Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I V VP+ +VGVVIG+ G+MIKK+QN+ G R+QF Q P ++ + G PD+ + A
Sbjct: 269 IDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGP-EKIAHIMGPPDRCEHAA 327
Query: 107 ARIEELIDSV 116
I +L+ S+
Sbjct: 328 RIINDLLQSL 337
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q ++G +VQ P +R L+G+P+ VQ+A+ ++
Sbjct: 95 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-ERSVSLTGAPESVQKAKMMLD 153
Query: 111 ELI 113
+++
Sbjct: 154 DIV 156
Score = 42.7 bits (99), Expect = 0.044, Method: Composition-based stats.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 8/97 (8%)
Query: 30 NENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDP 88
N NG G + E+ +P G+VIGKGG+ IK+LQ G ++ +Q ++
Sbjct: 170 NANGGQNGTVQEIM-------IPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTN 222
Query: 89 SDRRCMLSGSPDQVQEARARIEELIDSVMVEQFSGAN 125
D+ + G P +VQ+A + +++ +V F N
Sbjct: 223 VDKPLRIIGDPYKVQQACEMVMDILRNVTKAGFGDRN 259
Score = 42.4 bits (98), Expect = 0.060, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
+P G+VIG+GG+ +K + +TGA V+ + P+ + ++ GSP Q+ R
Sbjct: 373 IPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPTGTPTSKLFIIRGSPQQIDHCRQL 432
Query: 109 IEELID 114
IEE I+
Sbjct: 433 IEEKIE 438
>gi|363742963|ref|XP_423400.3| PREDICTED: tudor and KH domain-containing protein [Gallus gallus]
Length = 686
Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP+AAV +IG+ G I++LQ ETGAR+ EDD +R ++ GSP QV A+A +
Sbjct: 78 VPRAAVRAIIGRKGTTIRRLQQETGARIDLEG--EDDGEERLLLIWGSPSQVCRAKAAVH 135
Query: 111 ELI 113
+++
Sbjct: 136 QIV 138
Score = 38.9 bits (89), Expect = 0.69, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM-LSGSPDQVQEAR 106
Q+ VP+ AVG +IG GG+ ++ + +GA+VQ E + R + +SG+ +V A+
Sbjct: 147 QLHVPQRAVGRIIGHGGETVRSICRSSGAQVQCQHQAEAMLAPTRLIQISGTQREVDAAK 206
Query: 107 ARI-EELIDSVMVEQ 120
I E+L++ + Q
Sbjct: 207 KLIMEKLVEDAVFRQ 221
>gi|302416471|ref|XP_003006067.1| KH domain-containing protein [Verticillium albo-atrum VaMs.102]
gi|261355483|gb|EEY17911.1| KH domain-containing protein [Verticillium albo-atrum VaMs.102]
Length = 576
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 43/68 (63%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ VP AVG++IGKGG+ I+++QN TG ++ Q +R L GS + + +A+A
Sbjct: 414 IHVPSEAVGMIIGKGGETIREMQNNTGCKINVAQSSGPGEVEREIALIGSRESITQAKAA 473
Query: 109 IEELIDSV 116
IEE +D+V
Sbjct: 474 IEEKVDAV 481
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFV 81
+ +Q+ VP VG++IG+GG+ I+ LQ +G +
Sbjct: 301 DCLQIMVPDRTVGLIIGRGGETIRDLQERSGCHINIT 337
>gi|356514579|ref|XP_003525983.1| PREDICTED: uncharacterized protein LOC100797476 [Glycine max]
Length = 554
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 6/80 (7%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQEA 105
++ +P VGV+IGKGG+ IK LQ ++GA++Q + + DP S R L G+P+ + A
Sbjct: 87 KIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQITRDIDADPNSSTRTVELMGTPEAISSA 146
Query: 106 RARIEELIDSVMVEQFSGAN 125
E+LI+ V+ E SG +
Sbjct: 147 ----EKLINEVLAEAESGGS 162
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMR---EDDPSDRRCMLSGSPDQVQEARA 107
+P VG++IGKGG+ IK +Q TGAR+Q + + D ++R + G+P+Q++ A+
Sbjct: 182 IPNNKVGLIIGKGGETIKNMQASTGARIQVIPLHLPPGDTSTERTLKIDGTPEQIESAKQ 241
Query: 108 RIEELI 113
+ ++I
Sbjct: 242 LVYQVI 247
>gi|357437527|ref|XP_003589039.1| Far upstream element-binding protein [Medicago truncatula]
gi|355478087|gb|AES59290.1| Far upstream element-binding protein [Medicago truncatula]
Length = 605
Score = 55.5 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 6/80 (7%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEA 105
++ +P VGV+IGKGG+ IK LQ ++GA++Q + + DP+ +R L+G+ D + A
Sbjct: 115 KIEIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPNRLVELTGTSDAIATA 174
Query: 106 RARIEELIDSVMVEQFSGAN 125
E+LI V+ E SG N
Sbjct: 175 ----EKLIKEVLAEAESGGN 190
Score = 52.4 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 60/104 (57%), Gaps = 18/104 (17%)
Query: 35 GRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMR---EDDPSDR 91
G+GG E + ++ P VG++IGKGG+ IK +Q TGAR+Q + + D ++R
Sbjct: 199 GQGGADEFSMKI-----PNNKVGLIIGKGGETIKSMQATTGARIQVIPLHLPPGDTSTER 253
Query: 92 RCMLSGSPDQVQEARARIEELIDSVMVEQFSGANFDKLRSTVLA 135
+ G+ +Q++ A+ +L+DS++ SG N +LR+ ++
Sbjct: 254 TLKIEGTSEQIESAK----QLVDSIL----SGEN--RLRNPSMS 287
>gi|45383580|ref|NP_989608.1| far upstream element-binding protein 2 [Gallus gallus]
gi|25091747|sp|Q8UVD9.1|FUBP2_CHICK RecName: Full=Far upstream element-binding protein 2;
Short=FUSE-binding protein 2; AltName: Full=KH
type-splicing regulatory protein; Short=KSRP; AltName:
Full=Zipcode-binding protein 2
gi|18252632|gb|AAL66365.1|AF461020_1 zipcode-binding protein [Gallus gallus]
Length = 769
Score = 55.5 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 40/110 (36%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ+ I R D G + NE G GG I V VP+ +VGVVIG+ G+M
Sbjct: 356 QQACEMVMDILRERDQ-GGFGDRNEYGSRIGGG-------IDVPVPRHSVGVVIGRSGEM 407
Query: 67 IKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+QN+ G R+QF Q P ++ + G P++ + A I +L+ S+
Sbjct: 408 IKKIQNDAGVRIQFKQDDGTGP-EKIAHIMGPPERCEHAARIINDLLQSL 456
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q ++G +VQ P +R L+GSP+ VQ+A+ ++
Sbjct: 215 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-ERSVSLTGSPEAVQKAKLMLD 273
Query: 111 ELI 113
+++
Sbjct: 274 DIV 276
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 28 EFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD 87
+F++ +G+ G V ++ +P G+VIGKGG+ IK+LQ G ++ F+Q +
Sbjct: 286 QFHDYANGQNGT------VQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMIFIQDGSQN 339
Query: 88 PS-DRRCMLSGSPDQVQEA 105
+ D+ + G P +VQ+A
Sbjct: 340 TNVDKPLRIIGDPYKVQQA 358
Score = 43.1 bits (100), Expect = 0.040, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
+P G+VIG+GG+ +K + + GA V+ + DP+ + ++ GSP Q++ A+
Sbjct: 493 IPTHKCGLVIGRGGENVKAINQQRGAFVEISRQLPPNGDPNFKLFIIRGSPQQIEHAKQP 552
Query: 109 IEELID 114
IEE I+
Sbjct: 553 IEEKIE 558
>gi|346974117|gb|EGY17569.1| KH domain-containing protein [Verticillium dahliae VdLs.17]
Length = 589
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 43/68 (63%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ VP AVG++IGKGG+ I+++QN TG ++ Q +R L GS + + +A+A
Sbjct: 427 IHVPSEAVGMIIGKGGETIREMQNNTGCKINVAQSSGPGEVEREIALIGSRESITQAKAA 486
Query: 109 IEELIDSV 116
IEE +D+V
Sbjct: 487 IEEKVDAV 494
Score = 44.3 bits (103), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
+ +Q+ VP VG++IG+GG+ I+ LQ +G + + R L GSP
Sbjct: 319 DCLQIMVPDRTVGLIIGRGGETIRDLQERSGCHINITSEAKSTNGLRPVNLIGSPQAAAM 378
Query: 105 ARARIEELIDS 115
A+ I E++DS
Sbjct: 379 AKEAILEIVDS 389
Score = 39.3 bits (90), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E IQ+ + VG++IG+ G+ +++++ E+G RVQF+ + P R C +SG + E
Sbjct: 219 ETIQIE--SSLVGLIIGRQGENLRRIEGESGCRVQFMPSTDGGPY-RSCKISGPRPRRAE 275
Query: 105 ARARIEELI-DSVM 117
+ I +I DS M
Sbjct: 276 VKTAINRIIEDSGM 289
>gi|326496260|dbj|BAJ94592.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 689
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 31/91 (34%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSD--RRCM 94
GG ++ ++ +P VGV+IGK G+ IK LQ ++GA++Q + + P R
Sbjct: 135 GGGYQSGSTTKKIDIPNGRVGVIIGKAGETIKHLQAQSGAKIQVTRDMDVQPGSQTRSVD 194
Query: 95 LSGSPDQVQEARARIEELIDSVMVEQFSGAN 125
+SG+PDQ+ +R E+LI V+ E +G++
Sbjct: 195 ISGTPDQI----SRAEQLIIDVLAEADAGSS 221
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMR---EDDPSDRRCMLSGSPDQ 101
E Q+ + VG+VIGKGG+ IK +Q ++ AR+Q + + D ++R + G+ +Q
Sbjct: 237 EQFQMQIANNKVGLVIGKGGETIKSMQAKSQARIQVIPLHLPPGDTSTERTLYIDGTAEQ 296
Query: 102 VQEARARIEEL 112
++ A+ + E+
Sbjct: 297 IEIAKQLVSEV 307
>gi|255561653|ref|XP_002521836.1| RNA-binding protein Nova-1, putative [Ricinus communis]
gi|223538874|gb|EEF40472.1| RNA-binding protein Nova-1, putative [Ricinus communis]
Length = 544
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 50/80 (62%), Gaps = 6/80 (7%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSD--RRCMLSGSPDQVQEA 105
++ +P VGVVIGKGG+ IK +Q ++GA++Q + ++ DP R L G+ +Q+
Sbjct: 89 RITIPSGKVGVVIGKGGETIKNIQLQSGAKIQITKDQDADPHSLTRDVELMGTSEQI--- 145
Query: 106 RARIEELIDSVMVEQFSGAN 125
+R EELI+ V+ E +G +
Sbjct: 146 -SRAEELINDVIAETDAGGS 164
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMR---EDDPSDRRCMLSGSPDQ 101
E + VP VG++IGKGG+ IK +Q+ +GAR+Q + + D ++R ++G +Q
Sbjct: 180 EQFSIRVPNDKVGLLIGKGGETIKYMQSRSGARMQIIPLHLPPGDPTTERTVYINGLTEQ 239
Query: 102 VQEARARIEELIDSVMVEQFSGAN 125
++ A+ + ++++ + +G++
Sbjct: 240 IEAAKELVNDVLNGKRIIDPTGSS 263
>gi|356538917|ref|XP_003537947.1| PREDICTED: uncharacterized protein LOC100786134 [Glycine max]
Length = 794
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM---REDDPSDRRCMLSGSPDQ 101
E IQ+ VP VG++IG+ G+ IK LQ ++GAR+Q + DD +R ++G Q
Sbjct: 293 EQIQIQVPNEKVGLIIGRSGETIKSLQTKSGARIQLIPQHLPEGDDSKERTVQVTGDKRQ 352
Query: 102 VQEARARIEELID 114
+Q A+ I+E+++
Sbjct: 353 IQIAQELIKEVMN 365
Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 8/87 (9%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGS 98
E+T I+V P VGV+IGK GD I+ LQ +GA++Q + + DP + R L GS
Sbjct: 195 EITTRKIEV--PNNKVGVLIGKAGDTIRYLQYNSGAKIQITRDADADPLCATRSVELIGS 252
Query: 99 PDQVQEARARIEELIDSVMVEQFSGAN 125
+ + +A E+L+++V+ E +G +
Sbjct: 253 LESIDKA----EKLMNAVIAEADAGGS 275
>gi|70933846|ref|XP_738237.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56514288|emb|CAH87175.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 262
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
+V VPK+AV +IGKGG IK+LQN TG ++Q + RED ++R + GS D V++
Sbjct: 113 RVVVPKSAVSAIIGKGGHQIKQLQNNTGTKIQ-ISNREDGLNERIISIVGSFDSVRDTTT 171
Query: 108 RI 109
++
Sbjct: 172 KV 173
>gi|70949112|ref|XP_743997.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56523758|emb|CAH77309.1| hypothetical protein PC000132.02.0 [Plasmodium chabaudi chabaudi]
Length = 234
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
+V VPK+AV +IGKGG IK+LQN TG ++Q + RED ++R + GS D V++
Sbjct: 113 RVVVPKSAVSAIIGKGGHQIKQLQNNTGTKIQ-ISNREDGLNERIISIVGSFDSVRDTTT 171
Query: 108 RI 109
++
Sbjct: 172 KV 173
>gi|449299068|gb|EMC95082.1| hypothetical protein BAUCODRAFT_25198 [Baudoinia compniacensis UAMH
10762]
Length = 577
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 47/70 (67%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E + V A VG++IG+ G+ ++K+++ETGARVQF+Q ++ +R+C +SGS +
Sbjct: 177 ETETIRVKSALVGLIIGRNGENLRKVESETGARVQFIQAKDSHVPERQCTISGSLRAREG 236
Query: 105 ARARIEELID 114
A+A I +I+
Sbjct: 237 AKAAIFSIIE 246
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ VP AVG++IGKGG+ IK +Q TG ++ Q D R+ L+G+ + EA
Sbjct: 391 IHVPSEAVGMIIGKGGETIKDMQRTTGCKINVNQPVRPD-VTRKIDLAGTSRSMAEAERI 449
Query: 109 IEELIDSV 116
I E +++V
Sbjct: 450 IWEKVETV 457
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
QV VP VG++IG+GG+ IK LQ +G V V + R L GS A+
Sbjct: 283 QVMVPDKTVGLIIGRGGETIKDLQERSGCHVNIVGENKSVNGLRPVNLIGSESATAMAKE 342
Query: 108 RIEELIDS 115
I E+++S
Sbjct: 343 LILEIVES 350
>gi|297741005|emb|CBI31317.3| unnamed protein product [Vitis vinifera]
Length = 390
Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFV--QMREDDPSDRRCM-LSGSPDQ 101
E +Q+ VP VG++IGKGG+ IK LQ +GAR+Q + + E D S R + ++G Q
Sbjct: 272 EQVQIQVPNEKVGLIIGKGGETIKSLQTRSGARIQLIPQHLPEGDQSKERTVRVTGDKKQ 331
Query: 102 VQEARARIEELIDSVMVEQFS 122
++ AR I+E+++ + + F+
Sbjct: 332 IEMAREMIKEVMNQIWLLPFT 352
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQEARAR 108
VP VGV+IGK GD I+ LQ +GA++Q + + DP + R L GS + + +A
Sbjct: 182 VPNNKVGVLIGKAGDTIRFLQYNSGAKIQITRDADADPYSASRPVELIGSLENINKA--- 238
Query: 109 IEELIDSVMVEQFSG 123
E+LI V+ E +G
Sbjct: 239 -EKLIKDVIAEADAG 252
>gi|212275119|ref|NP_001130556.1| uncharacterized protein LOC100191655 [Zea mays]
gi|194689470|gb|ACF78819.1| unknown [Zea mays]
gi|223943199|gb|ACN25683.1| unknown [Zea mays]
gi|413936736|gb|AFW71287.1| hypothetical protein ZEAMMB73_610626 [Zea mays]
gi|413936737|gb|AFW71288.1| hypothetical protein ZEAMMB73_610626 [Zea mays]
Length = 690
Score = 55.1 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 51/80 (63%), Gaps = 6/80 (7%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEA 105
++ +P VGV+IGK G+ I+ +Q ++GA++Q + E +P R+ LSG+P+Q+ +A
Sbjct: 145 KIEIPNGRVGVIIGKAGETIRYIQLQSGAKIQVTRDHEAEPGALTRQVELSGNPEQISKA 204
Query: 106 RARIEELIDSVMVEQFSGAN 125
E+LI V+ E +G++
Sbjct: 205 ----EQLIKEVIAEADAGSS 220
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMR---EDDPSDRRCMLSGSPDQ 101
E Q+ + VG++IGKGG+ IK +Q ++GAR+Q + + D ++R + G+ +Q
Sbjct: 237 ETFQMKIANNKVGLIIGKGGETIKSMQAKSGARIQVIPLHLPAGDTSTERTVHIDGTQEQ 296
Query: 102 VQEARARIEEL 112
++ A+ + E+
Sbjct: 297 IEHAKQLVAEV 307
>gi|359495228|ref|XP_002277528.2| PREDICTED: uncharacterized protein LOC100253453 [Vitis vinifera]
Length = 772
Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 47/73 (64%), Gaps = 3/73 (4%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFV--QMREDDPSDRRCM-LSGSPDQ 101
E +Q+ VP VG++IGKGG+ IK LQ +GAR+Q + + E D S R + ++G Q
Sbjct: 272 EQVQIQVPNEKVGLIIGKGGETIKSLQTRSGARIQLIPQHLPEGDQSKERTVRVTGDKKQ 331
Query: 102 VQEARARIEELID 114
++ AR I+E+++
Sbjct: 332 IEMAREMIKEVMN 344
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 6/77 (7%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQEARAR 108
VP VGV+IGK GD I+ LQ +GA++Q + + DP + R L GS + + +A
Sbjct: 182 VPNNKVGVLIGKAGDTIRFLQYNSGAKIQITRDADADPYSASRPVELIGSLENINKA--- 238
Query: 109 IEELIDSVMVEQFSGAN 125
E+LI V+ E +G +
Sbjct: 239 -EKLIKDVIAEADAGGS 254
>gi|427786629|gb|JAA58766.1| Putative kinase anchor protein [Rhipicephalus pulchellus]
Length = 455
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 4/75 (5%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEA 105
V++V VPK VG VIG+ G IK++Q +T ++ F + DR ++ G+P VQEA
Sbjct: 49 VVKVTVPKDVVGGVIGRQGANIKRIQEKTNTKISFDNQGTGEECDRVAVIRGAPSDVQEA 108
Query: 106 RARIEELIDSVMVEQ 120
EEL+ + +VEQ
Sbjct: 109 ----EELLKACIVEQ 119
>gi|322780737|gb|EFZ09994.1| hypothetical protein SINV_05815 [Solenopsis invicta]
Length = 483
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 46/72 (63%), Gaps = 5/72 (6%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V VP A G +IGKGGD I +LQ +TGARV+ + + P ++R C+++G+ D + E
Sbjct: 16 LKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGTVDAIME 75
Query: 105 ARARIEELIDSV 116
+E ++D +
Sbjct: 76 V---MEFIMDKI 84
Score = 43.5 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 31/48 (64%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM 94
+++ VP + G++IGK G+ IK+++ E+G+ VQ Q +D RC+
Sbjct: 111 VKILVPNSTAGMIIGKAGNYIKQIKEESGSYVQISQKAKDLSLQERCI 158
>gi|213402419|ref|XP_002171982.1| conserved hypothetical protein [Schizosaccharomyces japonicus
yFS275]
gi|212000029|gb|EEB05689.1| conserved hypothetical protein [Schizosaccharomyces japonicus
yFS275]
Length = 467
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 42/63 (66%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
V A VG++IGKGG+ +++++++T RVQF+ R P +R +L+G P+ +++ R +
Sbjct: 109 VESACVGLLIGKGGETLRRIESQTNVRVQFMPERPSHPGERAAILTGRPECIEQCRREML 168
Query: 111 ELI 113
+I
Sbjct: 169 HMI 171
Score = 42.4 bits (98), Expect = 0.063, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
+P VG++IGKGG+ I+ LQ + R+ + R L GSP+ A+A I
Sbjct: 231 IPDRCVGLIIGKGGETIRDLQEASKTRINIKSESDSRNGARPVYLYGSPEATARAQAMIL 290
Query: 111 ELI 113
+++
Sbjct: 291 DIV 293
Score = 39.7 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 38/66 (57%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ VP+ +VG++IG+GG+ I+++ +T +++ + R L G+P+ ++ A A
Sbjct: 346 ISVPRESVGLLIGRGGETIREMNAQTKCQIKVAPDLRTPDNRRNVSLIGTPEAIELAEAT 405
Query: 109 IEELID 114
I ++
Sbjct: 406 IRRRLE 411
>gi|313234826|emb|CBY24770.1| unnamed protein product [Oikopleura dioica]
Length = 552
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP A VG++IG+GGD I K+Q ++G RV V S R C L+G+P+Q++ A+ +
Sbjct: 56 VPDAMVGLIIGRGGDQITKIQADSGCRVAVVPQSTGGTS-RPCTLTGNPEQIEAAKKMLA 114
Query: 111 ELI 113
++I
Sbjct: 115 DII 117
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 5/75 (6%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQE 104
+ +PK +VGVVIGK G+ I ++Q +T R+QFV DDP +R C + G +
Sbjct: 239 VTFMIPKVSVGVVIGKAGETINRIQEQTQTRIQFV---PDDPKILERGCYIIGPQEGCLV 295
Query: 105 ARARIEELIDSVMVE 119
A+ + E++ M E
Sbjct: 296 AQKEVLEVVRKKMEE 310
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 15/92 (16%)
Query: 26 MREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRE 85
M + NG GG +V + V P + GVVIGKGG+ I ++ +TGA FVQ+ +
Sbjct: 334 MNASHHNG---GGEQQVDYPV-----PASRAGVVIGKGGETINGIKEKTGA---FVQINK 382
Query: 86 DDPSD----RRCMLSGSPDQVQEARARIEELI 113
+ P++ + + G+ Q+ A+ I+E +
Sbjct: 383 NPPAEHPDWKYFTIRGNSQQIAHAQKLIQEKV 414
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQF-VQMREDDPSDRRCMLSGSPDQVQEAR 106
++ +P G+VIGK G+ ++ L+++ G V + DP R ++G PD+V
Sbjct: 157 EIIIPHDKCGIVIGKAGNTLRNLRSQFGCSVNLDSTVNTGDPKPLR--IAGPPDKVNLVV 214
Query: 107 ARIEELI 113
A + +++
Sbjct: 215 AEVHKMM 221
>gi|357140395|ref|XP_003571754.1| PREDICTED: uncharacterized protein LOC100835547 [Brachypodium
distachyon]
Length = 692
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 6/80 (7%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSD--RRCMLSGSPDQVQEA 105
++ +P VGV+IGK G+ IK LQ ++GA++Q + + P R LSG+P+Q+
Sbjct: 146 KIDIPNGRVGVIIGKSGETIKHLQLQSGAKIQVTRDMDVQPGSQTRSVDLSGTPEQI--- 202
Query: 106 RARIEELIDSVMVEQFSGAN 125
+R EELI V+ E +G++
Sbjct: 203 -SRAEELIRDVLAEADAGSS 221
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 43/71 (60%), Gaps = 3/71 (4%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMR---EDDPSDRRCMLSGSPDQ 101
E Q+ + VG+VIGKGG+ IK +Q ++GAR+Q + + D ++R + G+ DQ
Sbjct: 237 EQFQMQIANNKVGLVIGKGGETIKSMQAKSGARIQVIPLHLPPGDTSTERTLYIDGTTDQ 296
Query: 102 VQEARARIEEL 112
++ A+ + E+
Sbjct: 297 IEIAKQLVAEV 307
>gi|322707712|gb|EFY99290.1| far upstream element-binding protein 2 [Metarhizium anisopliae
ARSEF 23]
Length = 759
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 40/68 (58%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
V VP AVG++IGKGG+ I+ +QN TG ++ Q + R L G+ D + A+
Sbjct: 608 VYVPSDAVGMIIGKGGETIRDMQNTTGCKINVAQSSGPGETQREIALIGTRDSIARAKLA 667
Query: 109 IEELIDSV 116
I+E +D+V
Sbjct: 668 IDEKVDAV 675
Score = 42.7 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 37/69 (53%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+Q+ VP VG++IG+GG+ I+ LQ +G + V + R L G+ + A+
Sbjct: 500 MQIMVPDRTVGLIIGRGGETIRDLQERSGCHINIVGESKSVNGLRPVNLIGTVEAAARAK 559
Query: 107 ARIEELIDS 115
I E++DS
Sbjct: 560 DFILEIVDS 568
Score = 40.0 bits (92), Expect = 0.34, Method: Composition-based stats.
Identities = 23/80 (28%), Positives = 47/80 (58%), Gaps = 7/80 (8%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E IQ+ + VG++IG+ G+ +++++ +T RVQF+ + P R+C +SG +
Sbjct: 401 ETIQI--ESSLVGLIIGRQGENLRRIEADTNCRVQFLAATDGGPF-RQCRISGP----RP 453
Query: 105 ARARIEELIDSVMVEQFSGA 124
RA +++ I+ ++ + GA
Sbjct: 454 RRAEVKDAINRIIEDSGMGA 473
>gi|452848007|gb|EME49939.1| hypothetical protein DOTSEDRAFT_68678 [Dothistroma septosporum
NZE10]
Length = 545
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 53/82 (64%), Gaps = 4/82 (4%)
Query: 33 GDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
G+ RGG E+ E I+V + VG++IG+ G+ ++K++ ETGARVQF+Q + ++R+
Sbjct: 136 GNQRGGDTEI--ETIRVK--SSLVGLIIGRNGENLRKVEAETGARVQFIQASDKHQAERQ 191
Query: 93 CMLSGSPDQVQEARARIEELID 114
C +SGS + A+ I +I+
Sbjct: 192 CTISGSTRARENAKTAIFTIIE 213
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ VP +AVG++IGKGG+ IK +Q +G ++ Q + D R L+G+ Q++EA
Sbjct: 374 IQVPSSAVGMIIGKGGETIKDMQRTSGCKINVNQPQHPD-HHRNIDLAGTARQMEEAERI 432
Query: 109 IEELIDSV 116
I E +++V
Sbjct: 433 IWEKVETV 440
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
Q+ VP VG++IG+GG+ IK+LQ ++G V V + R L GS A+
Sbjct: 250 QIMVPDKTVGLIIGRGGETIKELQEKSGCHVNIVGENKSVNGLRPVNLIGSERATALAKE 309
Query: 108 RIEELIDS 115
I E+++S
Sbjct: 310 LILEIVES 317
>gi|449495710|ref|XP_004159922.1| PREDICTED: uncharacterized LOC101221280 [Cucumis sativus]
Length = 516
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 6/80 (7%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSD--RRCMLSGSPDQVQEA 105
++ +P VG++IGKGG+ IK LQ ++GA++Q + E DP R L G+ +QV
Sbjct: 89 KINIPNIKVGLIIGKGGETIKYLQLQSGAKIQITRDFEADPQSLTRDVELMGTSEQV--- 145
Query: 106 RARIEELIDSVMVEQFSGAN 125
+R E+LI+ V+ E SG +
Sbjct: 146 -SRAEQLINEVIAEADSGGS 164
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMR---EDDPSDRRCMLSGSPDQVQEARA 107
+P V +VIGKGG+ IK +Q+++ ARVQ + + D ++R ++G +Q++ A+
Sbjct: 186 IPNNKVALVIGKGGETIKSIQSKSAARVQIIPLHLPPGDTSTERSVYINGLKEQIESAKE 245
Query: 108 RIEELI 113
I E+I
Sbjct: 246 LINEVI 251
>gi|307181420|gb|EFN69015.1| RNA-binding protein Nova-1 [Camponotus floridanus]
Length = 514
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 46/72 (63%), Gaps = 5/72 (6%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V VP A G +IGKGGD I +LQ +TGARV+ + + P ++R C+++G+ D + E
Sbjct: 47 LKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGTVDAIME 106
Query: 105 ARARIEELIDSV 116
+E ++D +
Sbjct: 107 V---MEFIMDKI 115
Score = 43.1 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 31/48 (64%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM 94
+++ VP + G++IGK G+ IK+++ E+G+ VQ Q +D RC+
Sbjct: 142 VKILVPNSTAGMIIGKAGNYIKQIKEESGSYVQISQKAKDLSLQERCI 189
>gi|332026626|gb|EGI66735.1| RNA-binding protein Nova-1 [Acromyrmex echinatior]
Length = 514
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 46/72 (63%), Gaps = 5/72 (6%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V VP A G +IGKGGD I +LQ +TGARV+ + + P ++R C+++G+ D + E
Sbjct: 47 LKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGTVDAIME 106
Query: 105 ARARIEELIDSV 116
+E ++D +
Sbjct: 107 V---MEFIMDKI 115
Score = 43.1 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 31/48 (64%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM 94
+++ VP + G++IGK G+ IK+++ E+G+ VQ Q +D RC+
Sbjct: 142 VKILVPNSTAGMIIGKAGNYIKQIKEESGSYVQISQKAKDLSLQERCI 189
>gi|449438689|ref|XP_004137120.1| PREDICTED: uncharacterized protein LOC101221280 [Cucumis sativus]
Length = 516
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 6/80 (7%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSD--RRCMLSGSPDQVQEA 105
++ +P VG++IGKGG+ IK LQ ++GA++Q + E DP R L G+ +QV
Sbjct: 89 KINIPNIKVGLIIGKGGETIKYLQLQSGAKIQITRDFEADPQSLTRDVELMGTSEQV--- 145
Query: 106 RARIEELIDSVMVEQFSGAN 125
+R E+LI+ V+ E SG +
Sbjct: 146 -SRAEQLINEVIAEADSGGS 164
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMR---EDDPSDRRCMLSGSPDQVQEARA 107
+P V +VIGKGG+ IK +Q+++ ARVQ + + D ++R ++G +Q++ A+
Sbjct: 186 IPNNKVALVIGKGGETIKSIQSKSAARVQIIPLHLPPGDTSTERSVYINGLKEQIESAKE 245
Query: 108 RIEELI 113
I E+I
Sbjct: 246 LINEVI 251
>gi|403375361|gb|EJY87653.1| KH domain containing protein [Oxytricha trifallax]
Length = 794
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 42/63 (66%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IGK GD I++LQ ++GA++Q + + + R + G+PD+ Q+A+ IE
Sbjct: 394 VPNDCVGLIIGKSGDTIRQLQQDSGAKIQVAKKEIPNSNLRNVFVEGTPDKYQKAKELIE 453
Query: 111 ELI 113
E+I
Sbjct: 454 EII 456
>gi|55727889|emb|CAH90697.1| hypothetical protein [Pongo abelii]
Length = 297
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 16 IGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETG 75
+ ND+FG R M E + VP VG +IG+GG+ I ++Q E+G
Sbjct: 78 VAPQNDSFGTQLPPMHQQQSRSVMTE------EYKVPDGMVGFIIGRGGEQISRIQQESG 131
Query: 76 ARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
++Q P +R CML+G+P+ VQ A+ ++++++
Sbjct: 132 CKIQIAPDSGGLP-ERSCMLTGTPESVQSAKRLLDQIVE 169
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 13/87 (14%)
Query: 31 ENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP-- 88
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q D P
Sbjct: 178 HHGDGPGNA------VQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQ---DGPQN 228
Query: 89 --SDRRCMLSGSPDQVQEARARIEELI 113
+D+ ++G P +VQ+A+ + ELI
Sbjct: 229 TGADKPLRITGDPYKVQQAKEMVLELI 255
>gi|441629120|ref|XP_003281628.2| PREDICTED: far upstream element-binding protein 2-like [Nomascus
leucogenys]
Length = 805
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 42/63 (66%), Gaps = 2/63 (3%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I V VP+ +VGVVIG+ G+MIKK+QN+ G R+QF Q P ++ + G PD+ + A
Sbjct: 412 IDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGP-EKIAHIMGPPDRCEHA- 469
Query: 107 ARI 109
ARI
Sbjct: 470 ARI 472
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q ++G +VQ P +R L+G+P+ VQ+A+ ++
Sbjct: 238 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-ERSVSLTGAPESVQKAKMMLD 296
Query: 111 ELI 113
+++
Sbjct: 297 DIV 299
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 40 WEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCMLSG 97
W + +P G+VIG+GG+ +K + +TGA V+ + DP+ + ++ G
Sbjct: 504 WGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRG 563
Query: 98 SPDQVQEARARIEELID 114
SP Q+ A+ IEE I+
Sbjct: 564 SPQQIDHAKQLIEEKIE 580
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Query: 24 GNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ- 82
G +F++N +G V ++ +P G+VIGKGG+ IK+LQ G ++ +Q
Sbjct: 305 GPPGQFHDNANG-----GQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQD 359
Query: 83 MREDDPSDRRCMLSGSPDQVQEA 105
++ D+ + G P +VQ+A
Sbjct: 360 GSQNTNVDKPLRIIGDPYKVQQA 382
>gi|66910286|gb|AAH96867.1| Heterogeneous nuclear ribonucleoprotein K, like [Danio rerio]
gi|182889168|gb|AAI64732.1| Hnrpkl protein [Danio rerio]
Length = 431
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 62/118 (52%), Gaps = 10/118 (8%)
Query: 11 RWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIK 68
R++ G DN + F G RG ++ VI QV +PK G +IGKGG IK
Sbjct: 322 RYESMSGGGYDNNSSWEPFQSGG--RGSYSDIGGPVITTQVTIPKDLAGSIIGKGGQRIK 379
Query: 69 KLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELIDSVMVEQFSGANF 126
++++E+GA ++ + E DR ++G+ DQ+Q A+ ++ V+Q+SG F
Sbjct: 380 QIRHESGASIKIDEPLEGS-EDRIITITGTQDQIQNAQYLLQN-----SVKQYSGRFF 431
>gi|340377102|ref|XP_003387069.1| PREDICTED: far upstream element-binding protein 1-like [Amphimedon
queenslandica]
Length = 579
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 45/71 (63%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEA 105
I++ VP VG+VIG+ G+MI KLQ E+GA++Q + +R +SG+PD V++A
Sbjct: 87 TIEIKVPNRMVGLVIGRQGEMINKLQAESGAKIQVAPDGSEVSGERSVSISGTPDTVEKA 146
Query: 106 RARIEELIDSV 116
+ + +I++
Sbjct: 147 KLLVNGVIENA 157
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 48/84 (57%), Gaps = 7/84 (8%)
Query: 40 WEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP----SDRRCML 95
E EV+++ +P VG++IGKGG+MIK LQ G ++Q +Q D P ++ +
Sbjct: 167 LEAGQEVVELMIPAGKVGLIIGKGGEMIKMLQERAGCKMQMIQ---DGPYASTPEKPLRM 223
Query: 96 SGSPDQVQEARARIEELIDSVMVE 119
+G + ++AR + +L++ +E
Sbjct: 224 TGFSENCKKARQLVLDLMEQKELE 247
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E+I++ VP VG +IG+ G+ I +Q+ R+QF P R ++G P +VQ+
Sbjct: 261 EMIEMRVPSELVGFIIGRNGENINNIQSLCNVRLQFHHDIPHTPY-RLTTIAGKPLEVQK 319
Query: 105 ARARIEELI 113
A+ +EE++
Sbjct: 320 AKRMVEEMV 328
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/70 (22%), Positives = 37/70 (52%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
+ + +P G++IGKGGD +++L ++ ++ + +P ++ L G P +Q
Sbjct: 351 QTVSFPIPANKCGLIIGKGGDTVRQLMVQSNCHIELDRGPNTNPQEKLFNLRGLPQNIQA 410
Query: 105 ARARIEELID 114
A+ I + ++
Sbjct: 411 AQNLIRQKLE 420
>gi|159163538|pdb|1X4N|A Chain A, Solution Structure Of Kh Domain In Fuse Binding Protein 1
Length = 92
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R CML+G+P+ VQ A+ ++
Sbjct: 21 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP-ERSCMLTGTPESVQSAKRLLD 79
Query: 111 ELID 114
++++
Sbjct: 80 QIVE 83
>gi|242061024|ref|XP_002451801.1| hypothetical protein SORBIDRAFT_04g007950 [Sorghum bicolor]
gi|241931632|gb|EES04777.1| hypothetical protein SORBIDRAFT_04g007950 [Sorghum bicolor]
Length = 688
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMR---EDDPSDRRCMLSGSPDQ 101
E Q+ + VG+VIGKGG+ IK +Q +TGAR+Q + + D ++R + G+P+Q
Sbjct: 237 ETFQMKIANNKVGLVIGKGGETIKSMQQKTGARIQVIPLHLPAGDTSTERTVHIDGTPEQ 296
Query: 102 VQEARARIEEL 112
++ A+ + E+
Sbjct: 297 IESAKQLVIEV 307
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 46/74 (62%), Gaps = 6/74 (8%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEA 105
++ +P VGV+IGK G+ I+ +Q ++GA++Q + E +P R LSG+PDQ+ +A
Sbjct: 146 KIEIPNGRVGVIIGKAGETIRYIQLQSGAKIQVTRDHEAEPGALTRPVELSGNPDQISKA 205
Query: 106 RARIEELIDSVMVE 119
E+LI V+ E
Sbjct: 206 ----EQLIKEVLAE 215
>gi|302756263|ref|XP_002961555.1| hypothetical protein SELMODRAFT_437890 [Selaginella moellendorffii]
gi|300170214|gb|EFJ36815.1| hypothetical protein SELMODRAFT_437890 [Selaginella moellendorffii]
Length = 471
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEA 105
+V VP VG+VIGKGG+ I+ LQ ++GA++Q + E DP R+ L+G+P+Q+ A
Sbjct: 133 RVDVPNTKVGLVIGKGGETIRTLQQQSGAKIQVTRDAEADPGAVTRQVELTGTPEQISRA 192
Query: 106 RARIEELI 113
I E++
Sbjct: 193 EQLIREVV 200
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
I V VP VG++IGKGG+ I+ LQ +GAR+Q RE +P ++R L G+ Q
Sbjct: 222 IHVRVPNNKVGLIIGKGGETIRNLQQTSGARIQVQHDRETEPGATERIVTLVGTKQQTDI 281
Query: 105 ARARIEELI 113
A I+++I
Sbjct: 282 ATDMIKDVI 290
>gi|302775686|ref|XP_002971260.1| hypothetical protein SELMODRAFT_171892 [Selaginella moellendorffii]
gi|300161242|gb|EFJ27858.1| hypothetical protein SELMODRAFT_171892 [Selaginella moellendorffii]
Length = 465
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/68 (41%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEA 105
+V VP VG+VIGKGG+ I+ LQ ++GA++Q + E DP R+ L+G+P+Q+ A
Sbjct: 133 RVDVPNTKVGLVIGKGGETIRTLQQQSGAKIQVTRDAEADPGAVTRQVELTGTPEQISRA 192
Query: 106 RARIEELI 113
I E++
Sbjct: 193 EQLIREVV 200
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
I V VP VG++IGKGG+ I+ LQ +GAR+Q RE +P ++R L G+ Q
Sbjct: 222 IHVRVPNNKVGLIIGKGGETIRNLQQTSGARIQVQHDRETEPGATERIVTLVGTKQQTDI 281
Query: 105 ARARIEELI 113
A I+++I
Sbjct: 282 ATDMIKDVI 290
>gi|40225729|gb|AAH10083.1| FUBP1 protein [Homo sapiens]
Length = 304
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 16 IGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETG 75
+ ND+FG R M E + VP VG +IG+GG+ I ++Q E+G
Sbjct: 78 VAPQNDSFGTQLPPMHQQQSRSVMTE------EYKVPDGMVGFIIGRGGEQISRIQQESG 131
Query: 76 ARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
++Q P +R CML+G+P+ VQ A+ ++++++
Sbjct: 132 CKIQIAPDSGGLP-ERSCMLTGTPESVQSAKRLLDQIVE 169
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 13/87 (14%)
Query: 31 ENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP-- 88
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q D P
Sbjct: 178 HHGDGPGNA------VQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQ---DGPQN 228
Query: 89 --SDRRCMLSGSPDQVQEARARIEELI 113
+D+ ++G P +VQ+A+ + ELI
Sbjct: 229 TGADKPLRITGDPYKVQQAKEMVLELI 255
>gi|46117014|ref|XP_384525.1| hypothetical protein FG04349.1 [Gibberella zeae PH-1]
Length = 564
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 41/68 (60%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
V VP AVG++IGKGG+ I+++QN TG ++ Q + R L GS D + A+
Sbjct: 412 VYVPSDAVGMIIGKGGETIREMQNTTGCKINVAQSSGPGETQREIALIGSRDSIARAKQA 471
Query: 109 IEELIDSV 116
I+E +D+V
Sbjct: 472 IDEKVDAV 479
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 37/69 (53%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+Q+ VP VG++IG+GG+ I+ LQ +G + V + R L G+ + A+
Sbjct: 299 MQIMVPDRTVGLIIGRGGETIRDLQERSGCHINIVGESKSVNGLRPVNLIGTREAAARAK 358
Query: 107 ARIEELIDS 115
I E++DS
Sbjct: 359 DFIMEIVDS 367
Score = 35.8 bits (81), Expect = 5.1, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 46/81 (56%), Gaps = 7/81 (8%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSD-RRCMLSGSPDQVQ 103
E IQ+ + VG++IG+ G+ +++++ ++ RVQF+ + P R+C +SG +
Sbjct: 200 ETIQI--ESSLVGLIIGRQGENLRRIEADSNCRVQFLAPTDGGPGPYRQCKISGP----R 253
Query: 104 EARARIEELIDSVMVEQFSGA 124
R ++E I+ ++ + GA
Sbjct: 254 HRRGEVKEAINRIIEDSGMGA 274
>gi|404351641|ref|NP_998156.3| heterogeneous nuclear ribonucleoprotein K [Danio rerio]
Length = 431
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 62/118 (52%), Gaps = 10/118 (8%)
Query: 11 RWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIK 68
R++ G DN + F G RG ++ VI QV +PK G +IGKGG IK
Sbjct: 322 RYESMSGGGYDNNSSWEPFQSGG--RGSYSDIGGPVITTQVTIPKDLAGSIIGKGGQRIK 379
Query: 69 KLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELIDSVMVEQFSGANF 126
++++E+GA ++ + E DR ++G+ DQ+Q A+ ++ V+Q+SG F
Sbjct: 380 QIRHESGASIKIDEPLEGS-EDRIITITGTQDQIQNAQYLLQN-----SVKQYSGRFF 431
>gi|342873275|gb|EGU75481.1| hypothetical protein FOXB_13993 [Fusarium oxysporum Fo5176]
Length = 563
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 41/68 (60%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
V VP AVG++IGKGG+ I+++QN TG ++ Q + R L GS D + A+
Sbjct: 408 VYVPSDAVGMIIGKGGETIREMQNTTGCKINVAQSSGPGETQREIALIGSRDSIARAKLA 467
Query: 109 IEELIDSV 116
I+E +D+V
Sbjct: 468 IDEKVDAV 475
Score = 41.2 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 37/69 (53%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+Q+ VP VG++IG+GG+ I+ LQ +G + V + R L G+ + A+
Sbjct: 296 MQIMVPDRTVGLIIGRGGETIRDLQERSGCHINIVGESKSVNGLRPVNLIGTREAAARAK 355
Query: 107 ARIEELIDS 115
I E++DS
Sbjct: 356 DFIMEIVDS 364
Score = 38.9 bits (89), Expect = 0.62, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
+ + VG++IG+ G+ ++++++E+ RVQF+ + P R C +SG + E + I
Sbjct: 203 IDSSLVGLIIGRQGENLRRIESESNCRVQFLAATDGGPH-RLCKISGPRHRRAEVKDAIN 261
Query: 111 ELID 114
+ID
Sbjct: 262 RIID 265
>gi|408388015|gb|EKJ67710.1| hypothetical protein FPSE_12081 [Fusarium pseudograminearum CS3096]
Length = 566
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
V VP AVG++IGKGG+ I+++QN TG ++ Q + R L GS D + A+
Sbjct: 412 VYVPSDAVGMIIGKGGETIREMQNTTGCKINVAQSSGPGETQREIALIGSRDSIARAKQA 471
Query: 109 IEELIDSV 116
I+E +D+V
Sbjct: 472 IDEKVDAV 479
Score = 38.5 bits (88), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+Q+ VP VG++IG+GG+ I+ LQ +G + V + R L G+ + A+
Sbjct: 299 MQIMVPDRTVGLIIGRGGETIRDLQERSGCHINIVGESKSVNGLRPVNLIGTREAAARAK 358
Query: 107 ARIEELIDS 115
I E++DS
Sbjct: 359 DFIMEIVDS 367
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 46/81 (56%), Gaps = 7/81 (8%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSD-RRCMLSGSPDQVQ 103
E IQ+ + VG++IG+ G+ +++++ ++ RVQF+ + P R+C +SG +
Sbjct: 200 ETIQIE--SSLVGLIIGRQGENLRRIEADSNCRVQFLAPTDGGPGPYRQCKISGP----R 253
Query: 104 EARARIEELIDSVMVEQFSGA 124
R ++E I+ ++ + GA
Sbjct: 254 HRRGEVKEAINRIIEDSGMGA 274
>gi|242013849|ref|XP_002427613.1| A kinase anchor protein, putative [Pediculus humanus corporis]
gi|212512028|gb|EEB14875.1| A kinase anchor protein, putative [Pediculus humanus corporis]
Length = 456
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/76 (28%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
++V +P+ ++G++IG+GG+ IK ++ ++ ++ V+ + R+C++ G+P+ Q A
Sbjct: 45 LEVTIPEESLGIIIGRGGNTIKNIEVQSNVKIHIVENGSINGKYRKCIIRGTPEAAQYAE 104
Query: 107 ARIEELI-DSVMVEQF 121
+ I ELI + ++E F
Sbjct: 105 SLIHELIVNQPLIETF 120
Score = 35.8 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS-DRRCMLSGSPDQVQ 103
E ++ VP A G +IGK GD I+ + + ++ + S +++ ++ G+ DQ+
Sbjct: 118 ETFEMLVPSQACGRIIGKNGDSIRLISRNSNTKIIVENLSTAPFSLEKKIIIKGTSDQIA 177
Query: 104 EARARIEELIDSVM 117
A+ +E+ ++ M
Sbjct: 178 IAKLLVEQKVEEDM 191
>gi|406859724|gb|EKD12787.1| KH domain-containing protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 646
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ VP AVG++IGKGG+ IK++Q+ TG ++ V ++ +DR L GS D + A+
Sbjct: 419 IFVPSEAVGMIIGKGGETIKEIQSTTGCKIN-VSPKQPGETDREIGLVGSRDAIAAAKRA 477
Query: 109 IEELIDSVMVE 119
IEE +D+V +
Sbjct: 478 IEEKVDAVAAK 488
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 40/59 (67%)
Query: 56 VGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
VG++IG+ G+ +++++ ETG RVQF+ ++++ R C ++GS +A+A I +ID
Sbjct: 212 VGLIIGRQGENLRRVETETGCRVQFITGQDENGPYRECKITGSKVNRAKAKAEINRIID 270
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+Q+ VP VG++IG+GG+ I+ LQ +G V V ++ R L GS + A+
Sbjct: 307 MQIMVPDRTVGLIIGRGGETIRDLQERSGCHVNIVGEQKSVNGLRPVNLIGSREAAARAK 366
Query: 107 ARIEELIDS 115
I E+++S
Sbjct: 367 DMIMEIVES 375
>gi|313246067|emb|CBY35030.1| unnamed protein product [Oikopleura dioica]
Length = 564
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP A VG++IG+GGD I K+Q ++G RV V S R C L+G+P+Q++ A+ +
Sbjct: 68 VPDAMVGLIIGRGGDQITKIQADSGCRVAVVPQSTGGTS-RPCTLTGNPEQIEAAKKMLA 126
Query: 111 ELI 113
++I
Sbjct: 127 DII 129
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 5/71 (7%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEARAR 108
+PK +VGVVIGK G+ I ++Q +T R+QFV DDP +R C + G + A+
Sbjct: 255 IPKVSVGVVIGKAGETINRIQEQTQTRIQFV---PDDPKILERGCYIIGPQEGCLVAQKE 311
Query: 109 IEELIDSVMVE 119
+ E++ M E
Sbjct: 312 VLEVVRKKMEE 322
Score = 40.0 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 7/67 (10%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSD----RRCMLSGSPDQVQEAR 106
VP + GVVIGKGG+ I ++ +TGA FVQ+ ++ P++ + + G+ Q+ A+
Sbjct: 363 VPASRAGVVIGKGGETINGIKEKTGA---FVQINKNPPAEHPDWKYFTIRGNSQQIAHAQ 419
Query: 107 ARIEELI 113
I+E +
Sbjct: 420 KLIQEKV 426
>gi|296420788|ref|XP_002839950.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636158|emb|CAZ84141.1| unnamed protein product [Tuber melanosporum]
Length = 574
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEA 105
Q+ + + VG++IG+GG+ +++++ ETGARVQF+ +D S +R C + G+ Q+ A
Sbjct: 211 QMNIESSLVGLIIGRGGETLRRVEQETGARVQFLTNGQDRDSGGERVCNIQGTRPQISAA 270
Query: 106 RARIEELI 113
R IE++I
Sbjct: 271 RRAIEQII 278
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQF-VQMREDDPSDRRCMLSGSPDQVQEARARI 109
VP AVG++IGKGG+ IK +Q+ TG R+ Q ++ DP +R L+G+ + + AR I
Sbjct: 403 VPIDAVGMIIGKGGETIKDMQSSTGCRINVSSQFQQGDP-EREIALAGTREAIARARIAI 461
Query: 110 EELIDS 115
EE +++
Sbjct: 462 EEKVEA 467
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 41/69 (59%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
IQ+ VP VG++IG+GG+ I+ +Q+++G V V + R L GSP ++A+
Sbjct: 317 IQILVPDRTVGLIIGRGGETIRDIQDKSGCHVNIVGEAKSQNGQRPVNLIGSPQAAEDAK 376
Query: 107 ARIEELIDS 115
I E+++S
Sbjct: 377 RLIMEIVES 385
>gi|426256848|ref|XP_004022049.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 2
[Ovis aries]
Length = 466
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 55/94 (58%), Gaps = 5/94 (5%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 376 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 434
Query: 93 CMLSGSPDQVQEARARIEELIDSVMVEQFSGANF 126
++G+ DQ+Q A+ ++ + V+Q+SG F
Sbjct: 435 ITITGTQDQIQNAQYLLQNSVKH--VKQYSGKFF 466
>gi|326428680|gb|EGD74250.1| hypothetical protein PTSG_12419 [Salpingoeca sp. ATCC 50818]
Length = 619
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 47/73 (64%), Gaps = 5/73 (6%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQV 102
EV + +P VG+VIGKGG+ I +LQ ++GAR+Q +Q DDP ++ ++G D +
Sbjct: 194 EVDNMPIPSEKVGMVIGKGGETINRLQEQSGARLQVIQ---DDPFAQEKPLRMTGRRDAI 250
Query: 103 QEARARIEELIDS 115
+ A+ +++LID
Sbjct: 251 ERAKQLVKDLIDP 263
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 29/34 (85%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQF 80
+++ VP+ AVG VIG+GGD IK++Q E+GARVQF
Sbjct: 294 VEIKVPRVAVGRVIGRGGDSIKRIQAESGARVQF 327
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 41/67 (61%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ VP+ G++IG+GG+ I+ + ++GA V+ + + D+ +SG P+Q+ A+
Sbjct: 379 MPVPQERAGLIIGRGGESIRMIMQQSGAHVELDRAQPAVNGDKTFWISGDPEQIATAKRL 438
Query: 109 IEELIDS 115
I+E +D+
Sbjct: 439 IQEKLDA 445
>gi|401412830|ref|XP_003885862.1| HnRNP-E2 protein, related [Neospora caninum Liverpool]
gi|325120282|emb|CBZ55836.1| HnRNP-E2 protein, related [Neospora caninum Liverpool]
Length = 417
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/68 (42%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
++ VP++AV +IGKGG I++LQ+ TGARVQ V RE+ ++R ++G +QV+ A
Sbjct: 137 RLAVPRSAVSTIIGKGGQQIRELQDTTGARVQ-VSCREEGLAERMITITGLLEQVRAAAL 195
Query: 108 RIEELIDS 115
I I S
Sbjct: 196 GIASCIQS 203
Score = 42.7 bits (99), Expect = 0.042, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
I + VP ++G VIG+ G + ++ N TGAR+Q Q + P +DR+ +LSG+ V
Sbjct: 280 ISLQVPDQSIGAVIGRNGACVTEVINATGARIQISQKGDLVPGTNDRKIVLSGTVGAVHS 339
Query: 105 ARARIEELIDSV 116
A + + I +V
Sbjct: 340 AHLLLLQRIHAV 351
Score = 35.0 bits (79), Expect = 9.5, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
+++ V A G +IGK G I ++ +TG ++ + P DR ++SG +QV
Sbjct: 20 LKMIVNNVAAGAIIGKNGVAIAAMEQQTGCALKLSPLNAFYPGTQDRVLVMSGEQEQVNN 79
Query: 105 ARARIEELIDSVMVEQF 121
A I I + QF
Sbjct: 80 ALVLILGKIKETVTSQF 96
>gi|222622454|gb|EEE56586.1| hypothetical protein OsJ_05944 [Oryza sativa Japonica Group]
Length = 674
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/71 (40%), Positives = 44/71 (61%), Gaps = 6/71 (8%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSD--RRCMLSGSPDQVQEARAR 108
+P VGV+IGK G+ IK LQ ++GA++Q + + P R LSG+PDQ+ +R
Sbjct: 124 IPNGRVGVIIGKSGETIKNLQLQSGAKIQVTRDLDALPGSQTRPVELSGTPDQI----SR 179
Query: 109 IEELIDSVMVE 119
E+LI+ V+ E
Sbjct: 180 AEQLINEVLAE 190
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMR---EDDPSDRRCMLSGSPDQVQE 104
Q+ + VG+VIGKGG+ IK +Q ++GAR+Q V + D ++R + G+ +Q++
Sbjct: 215 QMKIANNKVGLVIGKGGETIKSMQAKSGARIQVVPLHLPPGDPATERTVYIDGTQEQIET 274
Query: 105 ARARIEEL 112
A+ + E+
Sbjct: 275 AKQLVIEV 282
>gi|218190341|gb|EEC72768.1| hypothetical protein OsI_06421 [Oryza sativa Indica Group]
Length = 658
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/71 (40%), Positives = 44/71 (61%), Gaps = 6/71 (8%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSD--RRCMLSGSPDQVQEARAR 108
+P VGV+IGK G+ IK LQ ++GA++Q + + P R LSG+PDQ+ +R
Sbjct: 108 IPNGRVGVIIGKSGETIKNLQLQSGAKIQVTRDLDALPGSQTRPVELSGTPDQI----SR 163
Query: 109 IEELIDSVMVE 119
E+LI+ V+ E
Sbjct: 164 AEQLINEVLAE 174
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMR---EDDPSDRRCMLSGSPDQVQE 104
Q+ + VG+VIGKGG+ IK +Q ++GAR+Q V + D ++R + G+ +Q++
Sbjct: 199 QMKIANNKVGLVIGKGGETIKSMQAKSGARIQVVPLHLPPGDPATERTVYIDGTQEQIET 258
Query: 105 ARARIEEL 112
A+ + E+
Sbjct: 259 AKQLVIEV 266
>gi|237844115|ref|XP_002371355.1| KH domain-containing protein [Toxoplasma gondii ME49]
gi|211969019|gb|EEB04215.1| KH domain-containing protein [Toxoplasma gondii ME49]
gi|221506360|gb|EEE31995.1| KH domain-containing protein, putative [Toxoplasma gondii VEG]
Length = 412
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ VP++AV +IGKGG I++LQ+ TGARVQ V RE+ ++R +SG +QV+ A
Sbjct: 136 LAVPRSAVSTIIGKGGQQIRELQDTTGARVQ-VSSREEGLAERMITISGVLEQVRAAALG 194
Query: 109 IEELIDS 115
I I S
Sbjct: 195 IASCIQS 201
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
I + VP ++G VIG+ G + ++ N TGARVQ Q + P +DR+ +LSG+ V
Sbjct: 279 ISLQVPDQSIGAVIGRNGACVTEVINATGARVQISQKGDLVPGTNDRKIVLSGTVGAVHS 338
Query: 105 ARARIEELIDSV 116
A + + I +V
Sbjct: 339 AHLLLLQRIHAV 350
>gi|302901749|ref|XP_003048502.1| hypothetical protein NECHADRAFT_2566 [Nectria haematococca mpVI
77-13-4]
gi|256729435|gb|EEU42789.1| hypothetical protein NECHADRAFT_2566 [Nectria haematococca mpVI
77-13-4]
Length = 544
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ VP AVG++IGKGG+ I+++QN TG ++ Q + R L G+ D + A+
Sbjct: 399 IYVPSDAVGMIIGKGGETIREMQNSTGCKINVAQSTNPGETQREIALIGTRDSIARAKQA 458
Query: 109 IEELIDSV 116
I+E +D+V
Sbjct: 459 IDEKVDAV 466
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 6 FQQSRRWQQGI-GRN-NDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKG 63
+ + R + G GRN + GN RE + RGG + E IQ+ + VG++IG+
Sbjct: 153 YDRDRSYSPGPRGRNFSPRGGNGRERSPL---RGG--DDNSETIQIE--SSLVGLIIGRQ 205
Query: 64 GDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELIDSVMVEQFSG 123
G+ +++++ E+ RVQF+ + P R+C +SG + RA ++E I+ ++ + G
Sbjct: 206 GENLRRIEAESNCRVQFLTSTDGGPF-RQCKISGP----RHRRAEVKEAINRIIDDSGMG 260
Query: 124 A 124
A
Sbjct: 261 A 261
Score = 38.9 bits (89), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+Q+ VP VG++IG+GG+ I+ LQ +G + V + R L G+ + A+
Sbjct: 286 MQIMVPDRTVGLIIGRGGETIRDLQERSGCHINIVGESKSVNGLRPVNLIGTREAAARAK 345
Query: 107 ARIEELIDS 115
I E++DS
Sbjct: 346 DFIMEIVDS 354
>gi|298706779|emb|CBJ29702.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 637
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQV 102
+V+ V +P VG+VIGKGG IK+LQN TG R+Q + P RR L+G +
Sbjct: 412 QVLHVIIPDDKVGLVIGKGGSTIKELQNRTGCRIQIPSQTDPGTYPPTRRVTLTGVGESP 471
Query: 103 QEARARIEELI 113
A+ IE ++
Sbjct: 472 HNAKRDIEMMV 482
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSD---RRCMLSGSPDQVQ 103
+++ VP VG++IG+GG I+ +Q + +Q + D P+D R L G V+
Sbjct: 221 VEMGVPSKMVGLIIGRGGSNIQSMQRDYQITIQIAS-QNDVPADSETRPVKLKGGRQSVE 279
Query: 104 EARARIEELI 113
+ R++I ++I
Sbjct: 280 QCRSQINQII 289
>gi|341893795|gb|EGT49730.1| hypothetical protein CAEBREN_09981 [Caenorhabditis brenneri]
Length = 529
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 46/79 (58%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
+ IQ+ +P G+VIGK G+ ++KL+N +G ++ VQ + SD+ ++G P QV+
Sbjct: 119 QTIQIMIPANKCGMVIGKAGETMRKLRNLSGCQIHLVQDSKLADSDKPLQVTGLPAQVKR 178
Query: 105 ARARIEELIDSVMVEQFSG 123
A +E+++ + SG
Sbjct: 179 AEQLVEDILKTTPETYISG 197
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
+ I V VP+ AVG ++G G +IKKL ETG ++QF M + DP+ +R + G+P ++
Sbjct: 207 KTIHVNVPREAVGAIMGTNGVIIKKLSQETGTKIQF--MPDADPALLERSIAIIGTPIKI 264
Query: 103 QEARARIEELIDSVMVEQ 120
+ A I +++ Q
Sbjct: 265 EIAVGCIRQIVSMATSSQ 282
Score = 38.1 bits (87), Expect = 1.3, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 42/71 (59%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEA 105
+ + VP G+VIG+GG++IK++ E+GA + + +E+ ++ ++ G+ QV+ A
Sbjct: 292 IFYLTVPSNKCGLVIGRGGEVIKQINVESGAHCELSREKEETLEEKTFVIRGTDQQVEHA 351
Query: 106 RARIEELIDSV 116
+ I + + +
Sbjct: 352 KHLIGQKVGEI 362
>gi|223947067|gb|ACN27617.1| unknown [Zea mays]
gi|413926085|gb|AFW66017.1| hypothetical protein ZEAMMB73_777138 [Zea mays]
Length = 704
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 46/74 (62%), Gaps = 6/74 (8%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEA 105
++ +P VGV+IGK G+ I+ +Q ++GA++Q + E +P R+ LSG P+Q+ +A
Sbjct: 142 KIEIPNGRVGVIIGKAGETIRYIQLQSGAKIQVTRDHEAEPGALTRQVELSGKPEQISKA 201
Query: 106 RARIEELIDSVMVE 119
E+LI V+ E
Sbjct: 202 ----EQLIKEVLAE 211
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMR---EDDPSDRRCMLSGSPDQ 101
E Q+ + VG++IGKGG+ IK +Q +GAR+Q + + D ++R + G+ +Q
Sbjct: 234 ETFQMKIANNKVGLIIGKGGETIKSMQANSGARIQVIPLHLPAGDTSTERTVHIDGTQEQ 293
Query: 102 VQEARARIEEL 112
++ A+ I E+
Sbjct: 294 IEAAKQLISEV 304
>gi|226506792|ref|NP_001146241.1| uncharacterized protein LOC100279814 [Zea mays]
gi|219886335|gb|ACL53542.1| unknown [Zea mays]
gi|413926084|gb|AFW66016.1| hypothetical protein ZEAMMB73_777138 [Zea mays]
Length = 692
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 46/74 (62%), Gaps = 6/74 (8%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEA 105
++ +P VGV+IGK G+ I+ +Q ++GA++Q + E +P R+ LSG P+Q+ +A
Sbjct: 142 KIEIPNGRVGVIIGKAGETIRYIQLQSGAKIQVTRDHEAEPGALTRQVELSGKPEQISKA 201
Query: 106 RARIEELIDSVMVE 119
E+LI V+ E
Sbjct: 202 ----EQLIKEVLAE 211
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMR---EDDPSDRRCMLSGSPDQ 101
E Q+ + VG++IGKGG+ IK +Q +GAR+Q + + D ++R + G+ +Q
Sbjct: 234 ETFQMKIANNKVGLIIGKGGETIKSMQANSGARIQVIPLHLPAGDTSTERTVHIDGTQEQ 293
Query: 102 VQEARARIEEL 112
++ A+ I E+
Sbjct: 294 IEAAKQLISEV 304
>gi|270009705|gb|EFA06153.1| hypothetical protein TcasGA2_TC008998 [Tribolium castaneum]
Length = 564
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 37/103 (35%), Positives = 56/103 (54%), Gaps = 13/103 (12%)
Query: 3 SIEFQQSRRWQQGIGRNNDNFGNMR-EFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIG 61
S E SR+ + + + DN R F+ GDG T+ +V VP A G +IG
Sbjct: 12 SPEIADSRK--RPLDGDTDNGDTKRSHFSPGGDG-------TYH-FKVLVPSVAAGAIIG 61
Query: 62 KGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQV 102
KGG+ I +LQ ETGARV+ + + P ++R C+++GS D +
Sbjct: 62 KGGETIAQLQKETGARVKMSKSHDFYPGTTERVCLITGSVDAI 104
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM-LSGSPDQVQEA 105
+++ VP + G++IGK G+ IK+++ +G+ VQ Q +D RC+ + G +Q ++A
Sbjct: 140 VKILVPNSTAGMIIGKAGNYIKQIKETSGSYVQISQKAKDVSLQERCITVIGEKEQNRQA 199
>gi|301116557|ref|XP_002906007.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262109307|gb|EEY67359.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 550
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 4/122 (3%)
Query: 4 IEFQQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKG 63
++ +Q R+ + G N+N+ +N G G + + VP+ VG +IG+G
Sbjct: 143 LKQEQLRKVAELNGTLNENYSESHSIGQNNYGPGN--DAHSSSYDMKVPRELVGYIIGRG 200
Query: 64 GDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQEARARIEELIDSVMVEQF 121
G+ I+ LQ ++GA +Q V+ E P +DR ++G+ D ++ A+ I+ LID Q
Sbjct: 201 GETIRDLQMKSGAHIQIVREEEGAPQTADRFVNIAGNQDTLELAQKLIQNLIDERQQNQG 260
Query: 122 SG 123
+G
Sbjct: 261 AG 262
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 36 RGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRC 93
R G + + I + VP VGV+IGK G+ IK +Q+ R+Q Q+ ++ +P R
Sbjct: 361 RHGYGATSGQTIYMQVPNDRVGVIIGKRGETIKGIQDRHAVRIQIPQVADEGSNPPVRTI 420
Query: 94 MLSGSPDQVQEARARIEELI 113
+ G + A+ ++ +I
Sbjct: 421 SIQGPAPNLAGAKEEVDMVI 440
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRE-DDPSDRRCML 95
GG+ + +++ VP VG++IG+GG IK +Q TG V Q + + P R +
Sbjct: 277 GGINPDGSDSVEIMVPNERVGLIIGRGGCTIKAIQQRTGTSVTIPQTPDPNHPEMRLITI 336
Query: 96 SGSPDQVQEARARIEELI 113
G+ + + A+ I+ ++
Sbjct: 337 RGTMEAKEAAKFEIQSMV 354
>gi|167516250|ref|XP_001742466.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779090|gb|EDQ92704.1| predicted protein [Monosiga brevicollis MX1]
Length = 319
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 14/101 (13%)
Query: 41 EVTWEV---IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCML 95
E W V I++ +P G VIG+GG+ I KLQ ETG V+ Q RE P ++R C++
Sbjct: 5 ECAWIVGSAIKLLIPAKCAGGVIGRGGENISKLQEETGLHVKLSQTREFYPGTAERTCLI 64
Query: 96 SGSPDQVQEARARIEELIDSVMVEQFSGANFDKLRSTVLAN 136
G P ++ R+ ++I AN D T LAN
Sbjct: 65 QGEPTRLIVGVNRVLDIIV---------ANDDHQDGTSLAN 96
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 45/77 (58%), Gaps = 5/77 (6%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDR---RCMLSGSPDQVQ 103
+ V VP A G V+GKGG ++K +++ TG ++ Q +D P+ R R + SP ++
Sbjct: 98 VTVAVPYNAAGSVLGKGGSILKGIKDATGCKIIISQ--KDGPAARYGERLIKIVSPTPLE 155
Query: 104 EARARIEELIDSVMVEQ 120
R ++ ++D+++ ++
Sbjct: 156 VPREGVKRVMDALLAQE 172
>gi|348528027|ref|XP_003451520.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Oreochromis niloticus]
Length = 429
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 60/118 (50%), Gaps = 10/118 (8%)
Query: 11 RWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIK 68
R+ G DN + F G RG ++ VI QV +PK G +IGKGG IK
Sbjct: 320 RYDSMSGGGYDNSSSWDHFQSGG--RGSYSDIGGPVITTQVTIPKDLAGSIIGKGGQRIK 377
Query: 69 KLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELIDSVMVEQFSGANF 126
++++E+GA ++ + E DR ++G+ DQ+Q A+ ++ V Q+SG F
Sbjct: 378 QIRHESGASIKIDEPLEGS-EDRIITITGTQDQIQNAQYLLQN-----SVRQYSGRFF 429
>gi|440476294|gb|ELQ44906.1| hypothetical protein OOU_Y34scaffold00037g48 [Magnaporthe oryzae
Y34]
gi|440490581|gb|ELQ70125.1| hypothetical protein OOW_P131scaffold00082g18 [Magnaporthe oryzae
P131]
Length = 590
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 33 GDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GD GG + T + I VP AVG++IGKGG+ I+++Q+ TG ++ Q + ++R
Sbjct: 410 GDHMGGGPDKTNDSI--YVPSEAVGMIIGKGGETIREMQSSTGCKINVSQSSGPNETERE 467
Query: 93 CMLSGSPDQVQEARARIEELIDSV 116
L GS D + A+ IE+ +++V
Sbjct: 468 IGLVGSLDAIARAKQAIEDKVEAV 491
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLS 96
GG + E++Q+ + VG++IG+GG+ +++++N+T RVQF+ D R+C +S
Sbjct: 199 GGGGDDNSEIMQIEA--SLVGLIIGRGGENLRRIENDTQCRVQFLPAAPTDGDHRQCKIS 256
Query: 97 GSPDQVQEARARIEELID 114
G + EARA I +ID
Sbjct: 257 GPAFRRAEARAAINRIID 274
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E IQ+ VP VG++IG+GG+ I+ LQ +G + V ++ R L GS +
Sbjct: 311 ECIQIMVPDRTVGLIIGRGGETIRDLQERSGCHINIVGEQKSVNGLRPVNLIGSMETTTR 370
Query: 105 ARARIEELIDS 115
A+ I E++DS
Sbjct: 371 AKNLIMEIVDS 381
>gi|148674928|gb|EDL06875.1| mCG121849, isoform CRA_f [Mus musculus]
Length = 306
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E D+
Sbjct: 173 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDQI 231
Query: 93 CMLSGSPDQVQEARARIEELIDSVMVEQFS 122
++G+ DQ+Q A+ ++ + ++E FS
Sbjct: 232 ITITGTQDQIQNAQYLLQNSVKHSILESFS 261
>gi|209151855|gb|ACI33086.1| Heterogeneous nuclear ribonucleoprotein K [Salmo salar]
Length = 433
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 54/94 (57%), Gaps = 8/94 (8%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ VI QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 346 GRGSYSDIGGPVITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 404
Query: 93 CMLSGSPDQVQEARARIEELIDSVMVEQFSGANF 126
++G+ DQ+Q A+ ++ V+Q+SG F
Sbjct: 405 ITINGTQDQIQNAQYLLQN-----SVKQYSGRFF 433
>gi|189239335|ref|XP_973573.2| PREDICTED: similar to pasilla CG16765-PK [Tribolium castaneum]
Length = 535
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 37/103 (35%), Positives = 56/103 (54%), Gaps = 13/103 (12%)
Query: 3 SIEFQQSRRWQQGIGRNNDNFGNMR-EFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIG 61
S E SR+ + + + DN R F+ GDG T+ +V VP A G +IG
Sbjct: 12 SPEIADSRK--RPLDGDTDNGDTKRSHFSPGGDG-------TYH-FKVLVPSVAAGAIIG 61
Query: 62 KGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQV 102
KGG+ I +LQ ETGARV+ + + P ++R C+++GS D +
Sbjct: 62 KGGETIAQLQKETGARVKMSKSHDFYPGTTERVCLITGSVDAI 104
Score = 41.2 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM-LSGSPDQVQEA 105
+++ VP + G++IGK G+ IK+++ +G+ VQ Q +D RC+ + G +Q ++A
Sbjct: 140 VKILVPNSTAGMIIGKAGNYIKQIKETSGSYVQISQKAKDVSLQERCITVIGEKEQNRQA 199
>gi|449447567|ref|XP_004141539.1| PREDICTED: uncharacterized protein LOC101203078 [Cucumis sativus]
gi|449481514|ref|XP_004156205.1| PREDICTED: uncharacterized LOC101203078 [Cucumis sativus]
Length = 787
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
Query: 43 TWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFV--QMREDDPSDRRCM-LSGSP 99
T E IQ+ VP VG++IG+GG+ IK LQ +GAR+Q + + E D S R + ++G
Sbjct: 281 TAEQIQLQVPNEKVGLIIGRGGETIKSLQTRSGARIQLIPQNLPEGDESKERTIRVTGDK 340
Query: 100 DQVQEARARIEELIDSVM 117
Q++ A I+E+++ +
Sbjct: 341 KQIEIATDMIKEVMNQTV 358
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/77 (37%), Positives = 49/77 (63%), Gaps = 6/77 (7%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEARAR 108
VP + VGV+IGK GD I+ LQ +GA++Q ++ E DP+ R + G+ + +++A
Sbjct: 193 VPNSKVGVLIGKAGDTIRYLQYNSGAKIQIMRDAEADPNRLTRPVEIIGTSENIKKA--- 249
Query: 109 IEELIDSVMVEQFSGAN 125
EELI++V+ E +G +
Sbjct: 250 -EELINAVIAEADAGGS 265
>gi|76157738|gb|AAX28573.2| SJCHGC01935 protein [Schistosoma japonicum]
Length = 263
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 31 ENGDGRGGMWEVTWEV--IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD- 87
+NG + T + I++ VP G+VIGK G+ IK LQ E G ++ +Q +
Sbjct: 168 KNGTPTTTTYNSTGSITTIEMMVPGLKAGLVIGKNGETIKNLQEENGVKMVLIQQSNNPT 227
Query: 88 PSDRRCMLSGSPDQVQEARARIEELIDS 115
P D+ +SG P +V++AR + LI+S
Sbjct: 228 PEDKPLRISGEPSRVEKARQAVLVLINS 255
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
+ +P VG+VIGKGG+ I +LQN+T +VQ Q +R L+G+P Q+ A+
Sbjct: 101 ETAIPDRFVGLVIGKGGEQITQLQNDTQCKVQISQAGT---PERTVTLTGTPQQIDHAKQ 157
Query: 108 RIEELID 114
I ++I+
Sbjct: 158 MIGDIIE 164
>gi|358334834|dbj|GAA53260.1| far upstream element-binding protein [Clonorchis sinensis]
Length = 664
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
I++ VP G++IGK G+ IK LQ E+G ++ +Q + P D+ ++G P +V++A
Sbjct: 214 IEMMVPGLKAGLIIGKNGETIKSLQEESGVKMVLIQQSNNPTPEDKPLRITGDPARVEKA 273
Query: 106 RARIEELIDS 115
R I LI++
Sbjct: 274 RQAILALINA 283
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 36/67 (53%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E Q VP G+VIGKGG+ IK++ +GA V+ + DP+ + + G+ ++ +
Sbjct: 297 ETTQYAVPAEKAGLVIGKGGESIKEICRVSGAHVEISKEPPPDPTIKIFNVRGNRQEIDQ 356
Query: 105 ARARIEE 111
A I E
Sbjct: 357 AIRMISE 363
Score = 39.3 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
+ +P VG+VIGK G+ I LQNE+G +VQ Q DR C+ + A+
Sbjct: 133 ETSIPDRYVGLVIGKRGEQITLLQNESGCKVQISQ-------DRVCLACRYTIFCRHAKQ 185
Query: 108 RIEELID 114
I ++I+
Sbjct: 186 LIGQIIE 192
>gi|402084416|gb|EJT79434.1| hypothetical protein GGTG_04518 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 589
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 44/68 (64%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ VP AVG++IGKGG+ I+++Q+ TG ++ Q + ++R L GS D ++ A+
Sbjct: 419 IYVPSDAVGMIIGKGGETIREMQSSTGCKINVSQSSGPNETEREIGLVGSRDSIERAKRA 478
Query: 109 IEELIDSV 116
IE+ +++V
Sbjct: 479 IEDKVETV 486
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 56 VGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELIDS 115
VG++IG+ G+ +++++ +T RVQF+ D R C ++G P + EARA I +ID
Sbjct: 215 VGLIIGRQGENLRRIEGDTQCRVQFLPASASDGDHRLCKITGPPPRRAEARAAINRIIDD 274
Query: 116 VMVEQFSGANFD 127
+ + FD
Sbjct: 275 SGMTPLNRGGFD 286
Score = 42.0 bits (97), Expect = 0.081, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E +Q+ VP VG++IG+GG+ I+ LQ +G + V + R L G+ +
Sbjct: 307 ECLQIMVPDRTVGLIIGRGGETIRDLQERSGCHINIVGESKSVNGLRPVNLIGTHETSMR 366
Query: 105 ARARIEELIDS 115
A+ I E+++S
Sbjct: 367 AKNLIMEIVES 377
>gi|74225344|dbj|BAE31602.1| unnamed protein product [Mus musculus]
Length = 459
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 352 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 410
Query: 93 CMLSGSPDQVQEARARIEELIDSV-MVEQFSGANF 126
++G+ DQ+Q A+ ++ + S+ M++ F+ F
Sbjct: 411 ITITGTQDQIQNAQYLLQNSVKSMQMLKDFNARYF 445
>gi|26325406|dbj|BAC26457.1| unnamed protein product [Mus musculus]
Length = 306
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R CML+G+P+ VQ A+ ++
Sbjct: 123 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP-ERSCMLTGTPESVQSAKRLLD 181
Query: 111 ELID 114
++++
Sbjct: 182 QIVE 185
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 13/87 (14%)
Query: 31 ENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP-- 88
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q D P
Sbjct: 194 HHGDGPGNA------VQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQ---DGPQN 244
Query: 89 --SDRRCMLSGSPDQVQEARARIEELI 113
+D+ ++G P +VQ+A+ + ELI
Sbjct: 245 TGADKPLRITGDPYKVQQAKEMVLELI 271
>gi|322700491|gb|EFY92246.1| far upstream element-binding protein 2 [Metarhizium acridum CQMa
102]
Length = 548
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 40/68 (58%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
V VP AVG++IGKGG+ I+ +QN TG ++ Q + R L G+ D + A+
Sbjct: 397 VYVPSDAVGMIIGKGGETIRDMQNTTGCKINVAQSSGPGETQREIALIGTRDSIARAKLA 456
Query: 109 IEELIDSV 116
I+E +D+V
Sbjct: 457 IDEKVDAV 464
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 37/69 (53%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+Q+ VP VG++IG+GG+ I+ LQ +G + V + R L G+ + A+
Sbjct: 289 MQIMVPDRTVGLIIGRGGETIRDLQERSGCHINIVGESKSVNGLRPVNLIGTVEAAARAK 348
Query: 107 ARIEELIDS 115
I E++DS
Sbjct: 349 DFILEIVDS 357
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 41/70 (58%), Gaps = 3/70 (4%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E IQ+ + VG++IG+ G+ +++++ +T RVQF+ + P R+C +SG + E
Sbjct: 190 ETIQI--ESSLVGLIIGRQGENLRRIEADTNCRVQFLAATDGGPF-RQCRISGPRPRRAE 246
Query: 105 ARARIEELID 114
+ I +I+
Sbjct: 247 VKDAINRIIE 256
>gi|310798116|gb|EFQ33009.1| KH domain-containing protein [Glomerella graminicola M1.001]
Length = 592
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 35 GRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM 94
G GG + + I VP AVG++IGKGG+ I+ +QN TG ++ Q R
Sbjct: 416 GPGGGPDKIHDAI--YVPSEAVGMIIGKGGETIRDMQNGTGCKINVAQSSGPGEVQREIA 473
Query: 95 LSGSPDQVQEARARIEELIDSV 116
L GS D + A+ IEE +D+V
Sbjct: 474 LIGSRDSITRAKQAIEEKVDAV 495
Score = 38.9 bits (89), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
+ +Q+ VP VG++IG+GG+ I+ LQ +G + V + R L GS + +
Sbjct: 319 DCMQIMVPDRTVGLIIGRGGETIRDLQERSGCHINIVGESKSVNGLRPVNLIGSRESAAQ 378
Query: 105 ARARIEELIDS 115
A+ I E+++S
Sbjct: 379 AKDLIMEIVES 389
Score = 38.5 bits (88), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 49/80 (61%), Gaps = 7/80 (8%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E IQ+ + VG++IG+ G+ ++++++E+ RVQF+ ++ P R+C ++G +
Sbjct: 210 ETIQIE--SSLVGLIIGRQGENLRRIESESTCRVQFLPSSDNGPF-RQCKITGP----RA 262
Query: 105 ARARIEELIDSVMVEQFSGA 124
RA ++E I+ ++ + GA
Sbjct: 263 RRAEVKEAINRIIDDSGMGA 282
>gi|403256748|ref|XP_003921014.1| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 3 [Saimiri boliviensis boliviensis]
Length = 611
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R C+L+G+P+ +++A+ +
Sbjct: 186 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIP-ERPCVLTGTPESIEQAKRLLG 244
Query: 111 ELID 114
+++D
Sbjct: 245 QIVD 248
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCM 94
GG+ E+T+ V P G+VIGKGG+ IK + ++GA V+ + DP+ RR
Sbjct: 391 GGVQEITYTV-----PADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFT 445
Query: 95 LSGSPDQVQEARARIEELI 113
+ G P Q++ AR I+E +
Sbjct: 446 IRGIPQQIEVARQLIDEKV 464
Score = 43.9 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 7/85 (8%)
Query: 23 FGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ 82
G + + NG G + + ++ +P + VG+VIG+GG+ IK+LQ TG ++ +Q
Sbjct: 243 LGQIVDRCRNGPGFHNDIDSNSTIQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQ 302
Query: 83 MREDDP----SDRRCMLSGSPDQVQ 103
D P +D+ ++G P +VQ
Sbjct: 303 ---DGPLPTGADKPLRITGDPFKVQ 324
>gi|380022723|ref|XP_003695188.1| PREDICTED: tudor and KH domain-containing protein-like [Apis
florea]
Length = 607
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP+ V VIG+GG MIK +QN+TG ++ F + D P DR C++ GS + V A E
Sbjct: 56 VPRQFVPAVIGRGGSMIKDIQNKTGTQIHFKEDNIDCP-DRICIIKGSYEGVHLA----E 110
Query: 111 ELIDSVMVEQ 120
E+I SV+ Q
Sbjct: 111 EMIKSVIQNQ 120
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 44/73 (60%), Gaps = 6/73 (8%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARV----QFVQMREDDPSDRRCMLSGSPD 100
E ++ VP+ A G +IG+GG++I ++Q + A+V F+ D ++RR ++ G+ +
Sbjct: 124 ETYEMYVPQRACGRIIGRGGEVIHQIQATSSAKVIIESSFIPY--DPNAERRIIIKGTAE 181
Query: 101 QVQEARARIEELI 113
Q+ A +IE+ +
Sbjct: 182 QIATALLQIEDKV 194
>gi|126723252|ref|NP_001075594.1| heterogeneous nuclear ribonucleoprotein K [Oryctolagus cuniculus]
gi|12230546|sp|O19049.1|HNRPK_RABIT RecName: Full=Heterogeneous nuclear ribonucleoprotein K;
Short=hnRNP K
gi|2644968|emb|CAA05815.1| hnRNP-K protein [Oryctolagus cuniculus]
Length = 463
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 8/94 (8%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 376 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 434
Query: 93 CMLSGSPDQVQEARARIEELIDSVMVEQFSGANF 126
++G+ DQ+Q A+ ++ V+Q+SG F
Sbjct: 435 ITITGTQDQIQNAQYLLQN-----SVKQYSGKFF 463
>gi|345485197|ref|XP_003425215.1| PREDICTED: far upstream element-binding protein 1-like isoform 2
[Nasonia vitripennis]
Length = 751
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 43/67 (64%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+++ +P VG++IGKGG+ IK+LQ ++GA++ +Q ++ ++G P +V+ A+
Sbjct: 186 VEIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQDGPGQEQEKPLRITGDPQKVEHAK 245
Query: 107 ARIEELI 113
+ ELI
Sbjct: 246 QLVYELI 252
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
V AA+GV IG+GG+ I +LQ+ETG ++Q P +R C L+GS D V A+ ++
Sbjct: 85 VSAAALGV-IGRGGEQITRLQSETGCKIQMAAESGGMP-ERTCTLTGSRDAVNRAKELVQ 142
Query: 111 ELID 114
+++
Sbjct: 143 SIVN 146
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
Query: 36 RGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCML 95
+G EVT+ V P G++IGKGG+ IK++ +TGA + + +++ +
Sbjct: 406 QGNKVEVTYPV-----PTNKCGIIIGKGGETIKQINQQTGAHCELDRRNPGTETEKFFTI 460
Query: 96 SGSPDQVQEAR 106
G+P+QV+ A+
Sbjct: 461 KGTPEQVEHAQ 471
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
VP G++IGKGG IK++ +TGA + + +D+ + G+P+QV+ A+
Sbjct: 317 VPSNKCGIIIGKGGVTIKEINQQTGAHCELDRRNPGTDTDKFFTIRGTPEQVEHAK 372
>gi|413926083|gb|AFW66015.1| hypothetical protein ZEAMMB73_777138 [Zea mays]
Length = 317
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 51/84 (60%), Gaps = 8/84 (9%)
Query: 38 GMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCML 95
G ++ T + I++ P VGV+IGK G+ I+ +Q ++GA++Q + E +P R+ L
Sbjct: 134 GGYQGTSKKIEI--PNGRVGVIIGKAGETIRYIQLQSGAKIQVTRDHEAEPGALTRQVEL 191
Query: 96 SGSPDQVQEARARIEELIDSVMVE 119
SG P+Q+ +A E+LI V+ E
Sbjct: 192 SGKPEQISKA----EQLIKEVLAE 211
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMR---EDDPSDRRCMLSGSPDQ 101
E Q+ + VG++IGKGG+ IK +Q +GAR+Q + + D ++R + G+ +Q
Sbjct: 234 ETFQMKIANNKVGLIIGKGGETIKSMQANSGARIQVIPLHLPAGDTSTERTVHIDGTQEQ 293
Query: 102 VQEARARIEELIDSV 116
++ A+ I E+ V
Sbjct: 294 IEAAKQLISEVTSEV 308
>gi|345485195|ref|XP_001603038.2| PREDICTED: far upstream element-binding protein 1-like isoform 1
[Nasonia vitripennis]
Length = 767
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 43/67 (64%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+++ +P VG++IGKGG+ IK+LQ ++GA++ +Q ++ ++G P +V+ A+
Sbjct: 202 VEIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQDGPGQEQEKPLRITGDPQKVEHAK 261
Query: 107 ARIEELI 113
+ ELI
Sbjct: 262 QLVYELI 268
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I +LQ+ETG ++Q P +R C L+GS D V A+ ++
Sbjct: 100 VPDKMVGLIIGRGGEQITRLQSETGCKIQMAAESGGMP-ERTCTLTGSRDAVNRAKELVQ 158
Query: 111 ELID 114
+++
Sbjct: 159 SIVN 162
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
Query: 36 RGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCML 95
+G EVT+ V P G++IGKGG+ IK++ +TGA + + +++ +
Sbjct: 422 QGNKVEVTYPV-----PTNKCGIIIGKGGETIKQINQQTGAHCELDRRNPGTETEKFFTI 476
Query: 96 SGSPDQVQEAR 106
G+P+QV+ A+
Sbjct: 477 KGTPEQVEHAQ 487
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
VP G++IGKGG IK++ +TGA + + +D+ + G+P+QV+ A+
Sbjct: 333 VPSNKCGIIIGKGGVTIKEINQQTGAHCELDRRNPGTDTDKFFTIRGTPEQVEHAK 388
>gi|392513715|ref|NP_001254774.1| heterogeneous nuclear ribonucleoprotein K [Sus scrofa]
Length = 463
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 8/94 (8%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 376 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 434
Query: 93 CMLSGSPDQVQEARARIEELIDSVMVEQFSGANF 126
++G+ DQ+Q A+ ++ V+Q+SG F
Sbjct: 435 ITITGTQDQIQNAQYLLQN-----SVKQYSGKFF 463
>gi|74223189|dbj|BAE40731.1| unnamed protein product [Mus musculus]
Length = 394
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 60/105 (57%), Gaps = 9/105 (8%)
Query: 24 GNMREFNENGDGRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFV 81
G+ +++ G GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++
Sbjct: 297 GSGYDYSYAG-GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKID 355
Query: 82 QMREDDPSDRRCMLSGSPDQVQEARARIEELIDSVMVEQFSGANF 126
+ E DR ++G+ DQ+Q A+ ++ V+Q+SG F
Sbjct: 356 EPLEGS-EDRIITITGTQDQIQNAQYLLQN-----SVKQYSGKFF 394
>gi|348517286|ref|XP_003446165.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Oreochromis niloticus]
Length = 435
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 8/91 (8%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ VI QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 348 GRGSYNDMGGPVITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 406
Query: 93 CMLSGSPDQVQEARARIEELIDSVMVEQFSG 123
+SG+ DQ+Q A+ ++ V+Q+SG
Sbjct: 407 ITISGTQDQIQNAQYLLQN-----SVKQYSG 432
>gi|224145055|ref|XP_002325510.1| predicted protein [Populus trichocarpa]
gi|222862385|gb|EEE99891.1| predicted protein [Populus trichocarpa]
Length = 581
Score = 52.4 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFV--QMREDDPSDRRCM-LSGSPDQVQ 103
+++ VP VG++IG+GG+ IK LQ ++GAR+Q + + E D S R + ++G QV+
Sbjct: 93 LEIPVPNEKVGLIIGRGGETIKGLQAKSGARIQLIPQHLPEGDGSKERTVRVTGDKRQVE 152
Query: 104 EARARIEELIDSVMVEQFSGANFDKLRS 131
AR I ++++ + ++F++ +S
Sbjct: 153 MAREMIMDVMNQTVRPSTLSSSFNQQQS 180
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 6/72 (8%)
Query: 56 VGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQEARARIEELI 113
VGV+IGKGGD I+ LQ +GA++Q + E D + R L G+ ++ A E+LI
Sbjct: 5 VGVLIGKGGDTIRYLQYNSGAKIQITRDSEADSQSTTRPVELIGTLSSIRNA----EKLI 60
Query: 114 DSVMVEQFSGAN 125
++V+ E +G +
Sbjct: 61 NAVIAEADAGGS 72
>gi|426219907|ref|XP_004004159.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 3
[Ovis aries]
Length = 439
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 8/94 (8%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 352 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 410
Query: 93 CMLSGSPDQVQEARARIEELIDSVMVEQFSGANF 126
++G+ DQ+Q A+ ++ V+Q+SG F
Sbjct: 411 ITITGTQDQIQNAQYLLQN-----SVKQYSGKFF 439
>gi|74198765|dbj|BAE30613.1| unnamed protein product [Mus musculus]
Length = 450
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 352 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 410
Query: 93 CMLSGSPDQVQEARARIEELIDSVMVEQFSGANF 126
++G+ DQ+Q A+ ++ + S+ + + S A +
Sbjct: 411 ITITGTQDQIQNAQYLLQNSVKSMQMLKDSNARY 444
>gi|354500004|ref|XP_003512093.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 4
[Cricetulus griseus]
Length = 439
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 8/94 (8%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 352 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 410
Query: 93 CMLSGSPDQVQEARARIEELIDSVMVEQFSGANF 126
++G+ DQ+Q A+ ++ V+Q+SG F
Sbjct: 411 ITITGTQDQIQNAQYLLQN-----SVKQYSGKFF 439
>gi|332236655|ref|XP_003267515.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 5
[Nomascus leucogenys]
gi|332832094|ref|XP_001154460.2| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 8 [Pan
troglodytes]
gi|338719652|ref|XP_003364039.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K [Equus
caballus]
gi|397475607|ref|XP_003809225.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 5 [Pan
paniscus]
gi|402897763|ref|XP_003911914.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 6
[Papio anubis]
gi|410978219|ref|XP_003995493.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 5
[Felis catus]
gi|426362137|ref|XP_004048237.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 5
[Gorilla gorilla gorilla]
gi|26341878|dbj|BAC34601.1| unnamed protein product [Mus musculus]
gi|26353476|dbj|BAC40368.1| unnamed protein product [Mus musculus]
gi|194374597|dbj|BAG62413.1| unnamed protein product [Homo sapiens]
Length = 439
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 8/94 (8%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 352 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 410
Query: 93 CMLSGSPDQVQEARARIEELIDSVMVEQFSGANF 126
++G+ DQ+Q A+ ++ V+Q+SG F
Sbjct: 411 ITITGTQDQIQNAQYLLQN-----SVKQYSGKFF 439
>gi|367055754|ref|XP_003658255.1| hypothetical protein THITE_2124810 [Thielavia terrestris NRRL 8126]
gi|347005521|gb|AEO71919.1| hypothetical protein THITE_2124810 [Thielavia terrestris NRRL 8126]
Length = 558
Score = 52.0 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 42/67 (62%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ VP AVG++IGKGG+ I+++QN TG ++ +Q +R L GS D + +A+
Sbjct: 401 IYVPSDAVGMIIGKGGETIREMQNMTGCKINVLQPSGPGEVEREIELVGSRDAIAQAKRA 460
Query: 109 IEELIDS 115
IE+ +D+
Sbjct: 461 IEDKVDA 467
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 37/69 (53%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+Q+ VP VG++IG+GG+ I+ LQ +G + V + R L G P + A+
Sbjct: 302 LQIMVPDRTVGLIIGRGGETIRDLQERSGCHINIVSENKSVNGLRPVNLIGPPAAARHAK 361
Query: 107 ARIEELIDS 115
I E++DS
Sbjct: 362 ELILEIVDS 370
Score = 39.7 bits (91), Expect = 0.41, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 37/63 (58%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
+ + VG++IG+ G+ +++++ E+ RVQF+ + R C ++G Q +EA+ I
Sbjct: 209 IEASLVGLIIGRQGENLRRVEGESRCRVQFIPPTGQNDQYRLCRITGPRPQREEAKEMIN 268
Query: 111 ELI 113
+I
Sbjct: 269 RII 271
>gi|389638780|ref|XP_003717023.1| hypothetical protein MGG_12809 [Magnaporthe oryzae 70-15]
gi|351642842|gb|EHA50704.1| hypothetical protein MGG_12809 [Magnaporthe oryzae 70-15]
Length = 498
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 31 ENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSD 90
+ GD GG + T + I V P AVG++IGKGG+ I+++Q+ TG ++ Q + ++
Sbjct: 316 QRGDHMGGGPDKTNDSIYV--PSEAVGMIIGKGGETIREMQSSTGCKINVSQSSGPNETE 373
Query: 91 RRCMLSGSPDQVQEARARIEELIDSV 116
R L GS D + A+ IE+ +++V
Sbjct: 374 REIGLVGSLDAIARAKQAIEDKVEAV 399
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLS 96
GG + E++Q+ + VG++IG+GG+ +++++N+T RVQF+ D R+C +S
Sbjct: 107 GGGGDDNSEIMQIEA--SLVGLIIGRGGENLRRIENDTQCRVQFLPAAPTDGDHRQCKIS 164
Query: 97 GSPDQVQEARARIEELID 114
G + EARA I +ID
Sbjct: 165 GPAFRRAEARAAINRIID 182
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E IQ+ VP VG++IG+GG+ I+ LQ +G + V ++ R L GS +
Sbjct: 219 ECIQIMVPDRTVGLIIGRGGETIRDLQERSGCHINIVGEQKSVNGLRPVNLIGSMETTTR 278
Query: 105 ARARIEELIDS 115
A+ I E++DS
Sbjct: 279 AKNLIMEIVDS 289
>gi|294460692|gb|ADE75920.1| unknown [Picea sitchensis]
Length = 199
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 42 VTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQ 101
V+ ++V +PK AVG V+GK G I+ ++ +GA+V+ + E SDR +SG+P+Q
Sbjct: 113 VSTTTVEVTIPKNAVGSVLGKRGSNIQHIREISGAKVK-LHDSESGASDRVIEISGTPEQ 171
Query: 102 VQEARARIEELI 113
A++ ++ I
Sbjct: 172 THAAKSLLQAFI 183
>gi|348668189|gb|EGZ08013.1| hypothetical protein PHYSODRAFT_339892 [Phytophthora sojae]
Length = 644
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 64/126 (50%), Gaps = 6/126 (4%)
Query: 4 IEFQQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVC----VPKAAVGVV 59
++ +Q R+ + G NDN+G R+ + + G + Q VP+ VG +
Sbjct: 145 LKQEQLRKVAELNGTLNDNYGGPRDGDSHSGGGNAHYGPGSSDGQSSYDMKVPRELVGYI 204
Query: 60 IGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQEARARIEELIDSVM 117
IG+GG+ I+ LQ ++GA +Q V+ E P DR ++G+ D + A+ I+ LID
Sbjct: 205 IGRGGETIRDLQMKSGAHIQIVREEEGAPQTPDRFVNITGNQDALDLAQRLIQNLIDERQ 264
Query: 118 VEQFSG 123
Q +G
Sbjct: 265 QNQGAG 270
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Query: 29 FNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRE--D 86
NE R G + + I + VP VGV+IGK G+ IK +Q+ R+Q Q+ +
Sbjct: 362 INEEPGQRHGYGMASGQTIYMQVPNDRVGVIIGKRGETIKGIQDRHAVRIQIPQVPDPGS 421
Query: 87 DPSDRRCMLSGSPDQVQEARARIEELI 113
+P R + G P + A+ ++ +I
Sbjct: 422 NPPVRTISIQGPPQNLTGAKEEVDMVI 448
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 10/108 (9%)
Query: 10 RRWQQGIG--RNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMI 67
R+ QG G R D+ M + GG+ + +++ VP VG++IG+GG I
Sbjct: 263 RQQNQGAGGFRERDDRDRMARY-------GGINPDGTDSVELLVPNERVGLIIGRGGCTI 315
Query: 68 KKLQNETGARVQFVQMREDDPSDRRCM-LSGSPDQVQEARARIEELID 114
K +Q TG V Q + + D R + + G+ + + A+ I +I+
Sbjct: 316 KAIQQRTGTSVTIPQTPDPNHPDMRLITIRGTMEAKEAAKFEIHSMIN 363
>gi|307213191|gb|EFN88688.1| RNA-binding protein Nova-1 [Harpegnathos saltator]
Length = 514
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V VP A G +IGKGGD I +LQ +TGARV+ + + P ++R C+++GS + +
Sbjct: 47 LKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGSVEAIMA 106
Query: 105 ARARIEELI 113
I E I
Sbjct: 107 VMDFIMEKI 115
Score = 43.1 bits (100), Expect = 0.035, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 31/48 (64%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM 94
+++ VP + G++IGK G+ IK+++ E+G+ VQ Q +D RC+
Sbjct: 142 VKILVPNSTAGMIIGKAGNYIKQIKEESGSYVQISQKAKDLSLQERCI 189
>gi|380490123|emb|CCF36233.1| KH domain-containing protein [Colletotrichum higginsianum]
Length = 603
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 39/68 (57%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ VP AVG++IGKGG+ I+ +QN TG ++ Q R L GS D + A+
Sbjct: 439 IYVPSEAVGMIIGKGGETIRDMQNGTGCKINVAQSSGPGEVQREIALIGSRDSIARAKQA 498
Query: 109 IEELIDSV 116
IEE +D+V
Sbjct: 499 IEEKVDAV 506
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 35 GRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM 94
G GG + E IQ+ + VG++IG+ G+ ++++++E+ RVQF+ ++ P R+C
Sbjct: 202 GSGGGGDDNAETIQIE--SSLVGLIIGRQGENLRRIESESNCRVQFLPSSDNGPF-RQCK 258
Query: 95 LSGSPDQVQEARARIEELID 114
++G + E + I +ID
Sbjct: 259 ITGPRARRSEVKEAINRIID 278
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
+ +Q+ VP VG++IG+GG+ I+ LQ +G + V + R L GS + +
Sbjct: 330 DCMQIMVPDRTVGLIIGRGGETIRDLQERSGCHINIVGESKSVNGLRPVNLIGSRESAAQ 389
Query: 105 ARARIEELIDS 115
A+ I E++DS
Sbjct: 390 AKDLIMEIVDS 400
>gi|256078995|ref|XP_002575777.1| far upstream (fuse) binding protein [Schistosoma mansoni]
gi|360043992|emb|CCD81538.1| putative far upstream (fuse) binding protein [Schistosoma mansoni]
Length = 396
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD-PSDRRCMLSGSPDQVQE 104
I++ VP G+VIGK G+ IK LQ E G ++ +Q + P D+ +SG P +V++
Sbjct: 186 TIEMMVPGLKAGLVIGKNGETIKNLQEENGVKMVLIQQSNNPTPEDKPLRISGEPARVEK 245
Query: 105 ARARIEELIDS 115
AR + LI+S
Sbjct: 246 ARQAVLVLINS 256
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
+ +P VG+VIGKGG+ I +LQN+T +VQ Q +R L+G+P Q+ A+
Sbjct: 102 ETAIPDRYVGLVIGKGGEQITQLQNDTQCKVQISQAGT---PERTVTLTGTPQQIDHAKQ 158
Query: 108 RIEELID 114
I ++I+
Sbjct: 159 MIGDIIE 165
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E Q VP G+VIGKGG+ IK++ +GA V+ + DPS + + G+ ++++
Sbjct: 272 ETSQYAVPAEKAGLVIGKGGESIKEICRVSGAHVEISKEPPPDPSIKIFNVRGNRQEIEQ 331
Query: 105 ARARIEE 111
A I E
Sbjct: 332 AIRMISE 338
>gi|390479167|ref|XP_002762342.2| PREDICTED: RNA-binding protein Nova-2-like [Callithrix jacchus]
Length = 608
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGS 98
E E++++ VP+ VG ++GKGG + + Q TGAR+Q + E P +RR ++GS
Sbjct: 500 ESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 559
Query: 99 PDQVQEARARIEELI 113
P Q A+ I + +
Sbjct: 560 PTNTQAAQYLISQRV 574
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 132 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 191
Query: 105 ARARIEELIDSV 116
+ I E + +
Sbjct: 192 VHSFIAEKVREI 203
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEAR 106
++ VP + G++IGKGG +K + ++GA VQ Q E + +R +SG P+QV +A
Sbjct: 231 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAV 290
Query: 107 ARI 109
+ I
Sbjct: 291 SAI 293
>gi|429857659|gb|ELA32513.1| kh domain-containing protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 543
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 43/84 (51%)
Query: 33 GDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
G GG ++ VP AVG++IGKGG+ I+ +QN TG ++ Q R
Sbjct: 364 GPQAGGPDKIHDAXXXXYVPSEAVGMIIGKGGETIRDMQNGTGCKINVAQSSGPGEVQRE 423
Query: 93 CMLSGSPDQVQEARARIEELIDSV 116
L GS D + A+ IEE +D+V
Sbjct: 424 IALIGSRDSIARAKQAIEEKVDAV 447
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
+ +Q+ VP VG++IG+GG+ I+ LQ +G + V + R L GS + +
Sbjct: 267 DCMQIMVPDRTVGLIIGRGGETIRDLQERSGCHINIVGESKSVNGLRPVNLIGSQESAAQ 326
Query: 105 ARARIEELIDS 115
A+ I E++DS
Sbjct: 327 AKDLIMEIVDS 337
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 36/53 (67%), Gaps = 3/53 (5%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSG 97
E IQ+ + VG++IG+ G+ ++++++E+ RVQF+ ++ P R+C ++G
Sbjct: 177 ETIQIE--SSLVGLIIGRQGENLRRIESESSCRVQFLPSSDNGPF-RQCKITG 226
>gi|226477992|emb|CAX72689.1| KH-type splicing regulatory protein (FUSE binding protein 2)
[Schistosoma japonicum]
Length = 535
Score = 52.0 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
I++ VP G+VIGK G+ IK LQ E G ++ +Q + P D+ +SG P +V++A
Sbjct: 186 IEMMVPGLKAGLVIGKNGETIKNLQEENGVKMVLIQQSNNPTPEDKPLRISGEPSRVEKA 245
Query: 106 RARIEELIDS 115
R + LI+S
Sbjct: 246 RQAVLVLINS 255
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
+ +P VG+VIGKGG+ I +LQN+T +VQ Q +R L+G+P Q+ A+
Sbjct: 101 ETAIPDRFVGLVIGKGGEQITQLQNDTQCKVQISQA---GTPERTVTLTGTPQQIDHAKQ 157
Query: 108 RIEELID 114
I ++I+
Sbjct: 158 MIGDIIE 164
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 37/67 (55%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E Q VP G+VIGKGG+ IK++ +GA V+ + DPS + + G+ ++++
Sbjct: 271 ETSQYAVPAEKAGLVIGKGGESIKEICRVSGAHVEISKEPPPDPSIKIFNVRGNRQEIEQ 330
Query: 105 ARARIEE 111
A I E
Sbjct: 331 AIRMISE 337
>gi|256078999|ref|XP_002575779.1| far upstream (fuse) binding protein [Schistosoma mansoni]
gi|360043990|emb|CCD81536.1| putative far upstream (fuse) binding protein [Schistosoma mansoni]
Length = 334
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 31 ENGDGRGGMWEVTWEV--IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD- 87
+NG + T + I++ VP G+VIGK G+ IK LQ E G ++ +Q +
Sbjct: 169 KNGTPTTPAYNSTGSITTIEMMVPGLKAGLVIGKNGETIKNLQEENGVKMVLIQQSNNPT 228
Query: 88 PSDRRCMLSGSPDQVQEARARIEELIDS 115
P D+ +SG P +V++AR + LI+S
Sbjct: 229 PEDKPLRISGEPARVEKARQAVLVLINS 256
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
+ +P VG+VIGKGG+ I +LQN+T +VQ Q +R L+G+P Q+ A+
Sbjct: 102 ETAIPDRYVGLVIGKGGEQITQLQNDTQCKVQISQAGT---PERTVTLTGTPQQIDHAKQ 158
Query: 108 RIEELID 114
I ++I+
Sbjct: 159 MIGDIIE 165
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E Q VP G+VIGKGG+ IK++ +GA V+ + DPS + + G+ ++++
Sbjct: 272 ETSQYAVPAEKAGLVIGKGGESIKEICRVSGAHVEISKEPPPDPSIKIFNVRGNRQEIEQ 331
Query: 105 A 105
A
Sbjct: 332 A 332
>gi|257205944|emb|CAX82623.1| putative KH-type splicing regulatory protein [Schistosoma
japonicum]
Length = 513
Score = 52.0 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
I++ VP G+VIGK G+ IK LQ E G ++ +Q + P D+ +SG P +V++A
Sbjct: 164 IEMMVPGLKAGLVIGKNGETIKNLQEENGVKMVLIQQSNNPTPEDKPLRISGEPSRVEKA 223
Query: 106 RARIEELIDS 115
R + LI+S
Sbjct: 224 RQAVLVLINS 233
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
+ +P VG+VIGKGG+ I +LQN+T +VQ Q +R L+G+P Q+ A+
Sbjct: 79 ETAIPDRFVGLVIGKGGEQITQLQNDTQCKVQISQA---GTPERTVTLTGTPQQIDHAKQ 135
Query: 108 RIEELID 114
I ++I+
Sbjct: 136 MIGDIIE 142
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 37/67 (55%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E Q VP G+VIGKGG+ IK++ +GA V+ + DPS + + G+ ++++
Sbjct: 249 ETSQYAVPAEKAGLVIGKGGESIKEICRVSGAHVEISKEPPPDPSIKIFNVRGNRQEIEQ 308
Query: 105 ARARIEE 111
A I E
Sbjct: 309 AIRMISE 315
>gi|432873594|ref|XP_004072294.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Oryzias
latipes]
Length = 433
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 8/91 (8%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ VI QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 346 GRGSYSDMGGPVITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 404
Query: 93 CMLSGSPDQVQEARARIEELIDSVMVEQFSG 123
++G+ DQ+Q A+ ++ V+Q+SG
Sbjct: 405 ITITGTQDQIQNAQYLLQN-----SVKQYSG 430
>gi|257206622|emb|CAX82939.1| KH-type splicing regulatory protein (FUSE binding protein 2)
[Schistosoma japonicum]
Length = 535
Score = 51.6 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
I++ VP G+VIGK G+ IK LQ E G ++ +Q + P D+ +SG P +V++A
Sbjct: 186 IEMMVPGLKAGLVIGKNGETIKNLQEENGVKMVLIQQSNNPTPEDKPLRISGEPSRVEKA 245
Query: 106 RARIEELIDS 115
R + LI+S
Sbjct: 246 RQAVLVLINS 255
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
+ +P VG+VIGKGG+ I +LQN+T +VQ Q +R L+G+P Q+ A+
Sbjct: 101 ETAIPDRFVGLVIGKGGEQITQLQNDTQCKVQISQA---GTPERTVTLTGTPQQIDHAKQ 157
Query: 108 RIEELID 114
I ++I+
Sbjct: 158 MIGDIIE 164
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 37/67 (55%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E Q VP G+VIGKGG+ IK++ +GA V+ + DPS + + G+ ++++
Sbjct: 271 ETSQYAVPAEKAGLVIGKGGESIKEICRVSGAHVEISKEPPPDPSIKIFNVRGNRQEIEQ 330
Query: 105 ARARIEE 111
A I E
Sbjct: 331 AIRMISE 337
>gi|256078997|ref|XP_002575778.1| far upstream (fuse) binding protein [Schistosoma mansoni]
gi|360043991|emb|CCD81537.1| putative far upstream (fuse) binding protein [Schistosoma mansoni]
Length = 373
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD-PSDRRCMLSGSPDQVQE 104
I++ VP G+VIGK G+ IK LQ E G ++ +Q + P D+ +SG P +V++
Sbjct: 186 TIEMMVPGLKAGLVIGKNGETIKNLQEENGVKMVLIQQSNNPTPEDKPLRISGEPARVEK 245
Query: 105 ARARIEELIDS 115
AR + LI+S
Sbjct: 246 ARQAVLVLINS 256
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
+ +P VG+VIGKGG+ I +LQN+T +VQ Q +R L+G+P Q+ A+
Sbjct: 102 ETAIPDRYVGLVIGKGGEQITQLQNDTQCKVQISQAGT---PERTVTLTGTPQQIDHAKQ 158
Query: 108 RIEELID 114
I ++I+
Sbjct: 159 MIGDIIE 165
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E Q VP G+VIGKGG+ IK++ +GA V+ + DPS + + G+ ++++
Sbjct: 272 ETSQYAVPAEKAGLVIGKGGESIKEICRVSGAHVEISKEPPPDPSIKIFNVRGNRQEIEQ 331
Query: 105 ARARIEE 111
A I E
Sbjct: 332 AIRMISE 338
>gi|410904074|ref|XP_003965518.1| PREDICTED: far upstream element-binding protein 3-like [Takifugu
rubripes]
Length = 569
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEA 105
+ V VP+ AVG++IG+ G+MI+K+QN+ G R+QF Q P +R + G D A
Sbjct: 256 TLDVVVPRFAVGIIIGRNGEMIRKIQNDAGVRIQFKQDDGISP-ERVAQVMGQLDHCHHA 314
Query: 106 RARIEELIDSV 116
I EL+ +
Sbjct: 315 VHIINELVQTA 325
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 44/70 (62%), Gaps = 7/70 (10%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP----SDRRCMLSGSPDQVQ 103
Q+ +P VG+VIGK G+ IK+LQ TG ++ +Q DDP +D+ ++G P +VQ
Sbjct: 167 QILIPANKVGLVIGKKGETIKQLQERTGVQMIMIQ---DDPLPTGADKPLRITGDPQKVQ 223
Query: 104 EARARIEELI 113
+AR + +LI
Sbjct: 224 QARELVVKLI 233
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 7/84 (8%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ--MREDDPS 89
N G GG+ EVT+ VP G+VIGKGG+ IK ++ ++ A V+ + DPS
Sbjct: 344 NMGGSGGLQEVTY-----AVPADKCGLVIGKGGETIKNIKEQSRAHVELQRNPPPNTDPS 398
Query: 90 DRRCMLSGSPDQVQEARARIEELI 113
R + G+P Q+++AR I+E I
Sbjct: 399 VRIFSIRGTPQQLEKARQLIDERI 422
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IGKGG+ I ++Q E+G ++Q + DR C L+GSP+ ++ A+ +
Sbjct: 85 VPDKMVGFIIGKGGEQISRIQLESGCKIQ-IASDSGGMLDRPCTLTGSPENIELAKRLLN 143
Query: 111 ELID 114
E+++
Sbjct: 144 EIVE 147
>gi|443706480|gb|ELU02506.1| hypothetical protein CAPTEDRAFT_171430 [Capitella teleta]
Length = 448
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%)
Query: 23 FGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ 82
N+ E E RG + +I+V VP+ VG VIG GG +IK++Q ETGARV F
Sbjct: 30 LKNLMEDEEEDLDRGQVVRSRQTIIEVKVPRDCVGAVIGSGGCVIKQIQEETGARVNFKD 89
Query: 83 MREDDPSDRRCMLSGSPDQVQEARARIEELI 113
+ +R ++ G+ Q+A I ++I
Sbjct: 90 EGSQEGQERMVIIRGTLTSAQQAEIMIRKII 120
>gi|345495410|ref|XP_001602171.2| PREDICTED: hypothetical protein LOC100118119 [Nasonia vitripennis]
Length = 533
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V VP A G +IGKGG+ I +LQ +TGARV+ + + P ++R C+++GS D +
Sbjct: 47 LKVLVPGVAAGAIIGKGGETIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGSVDAIMA 106
Query: 105 ARARIEELI 113
I E I
Sbjct: 107 VMDFIMEKI 115
Score = 43.1 bits (100), Expect = 0.037, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 31/48 (64%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM 94
+++ VP + G++IGK G+ IK+++ E+G+ VQ Q +D RC+
Sbjct: 142 VKILVPNSTAGMIIGKAGNYIKQIKEESGSYVQISQKAKDVSLQERCI 189
>gi|121483935|gb|ABM54275.1| FUBP3 [Pan paniscus]
gi|122053927|gb|ABM65955.1| FUBP3 [Ateles geoffroyi]
Length = 114
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R C+L+G+P+ +++A+ +
Sbjct: 9 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIP-ERPCVLTGTPESIEQAKRLLG 67
Query: 111 ELID 114
+++D
Sbjct: 68 QIVD 71
>gi|430814707|emb|CCJ28098.1| unnamed protein product [Pneumocystis jirovecii]
Length = 360
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 38/59 (64%)
Query: 56 VGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
VG++IG+GG+ +K ++ ETGARVQF R + R +SG+ QV A+ RI +I+
Sbjct: 171 VGLIIGRGGESLKHIEQETGARVQFYPERTSIMNQRMATISGTQAQVDTAKKRIFSVIE 229
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%)
Query: 44 WEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQ 103
+ IQ+ +P AVG++IG+GG+ I+ LQ + + E R + G+ + +Q
Sbjct: 257 YSSIQIYIPNKAVGMIIGRGGESIRDLQERSKTYINIAHENETIHGMRPAYIFGTSESIQ 316
Query: 104 EARARIEELIDSVMVEQFSGAN 125
A+ I+E+I + V F N
Sbjct: 317 IAKNMIDEIIKTDSVISFEAEN 338
>gi|256078993|ref|XP_002575776.1| far upstream (fuse) binding protein [Schistosoma mansoni]
gi|360043993|emb|CCD81539.1| putative far upstream (fuse) binding protein [Schistosoma mansoni]
Length = 356
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 31 ENGDGRGGMWEVTWEV--IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD- 87
+NG + T + I++ VP G+VIGK G+ IK LQ E G ++ +Q +
Sbjct: 169 KNGTPTTPAYNSTGSITTIEMMVPGLKAGLVIGKNGETIKNLQEENGVKMVLIQQSNNPT 228
Query: 88 PSDRRCMLSGSPDQVQEARARIEELIDS 115
P D+ +SG P +V++AR + LI+S
Sbjct: 229 PEDKPLRISGEPARVEKARQAVLVLINS 256
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEA 105
+ +P VG+VIGKGG+ I +LQN+T +VQ Q +R L+G+P Q+ A
Sbjct: 100 TTETAIPDRYVGLVIGKGGEQITQLQNDTQCKVQISQAGT---PERTVTLTGTPQQIDHA 156
Query: 106 RARIEELID 114
+ I ++I+
Sbjct: 157 KQMIGDIIE 165
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 34 DGRGGMWEVTW---EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSD 90
D GG + E Q VP G+VIGKGG+ IK++ +GA V+ + DPS
Sbjct: 258 DRPGGSMHYGYDGQETSQYAVPAEKAGLVIGKGGESIKEICRVSGAHVEISKEPPPDPSI 317
Query: 91 RRCMLSGSPDQVQEA 105
+ + G+ ++++A
Sbjct: 318 KIFNVRGNRQEIEQA 332
>gi|326499738|dbj|BAJ86180.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 134
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Query: 52 PKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSD--RRCMLSGSPDQVQEARARI 109
PK VGV+IGK G+ IK +Q ++GA++Q + + PS R LSG+P + +R
Sbjct: 2 PKWKVGVIIGKTGETIKHIQLQSGAKIQVTRDMDVQPSSQTRLVDLSGTPGHI----SRA 57
Query: 110 EELIDSVMVEQFSGA 124
E+LI V+ E +G+
Sbjct: 58 EQLISDVLAEAHAGS 72
>gi|326430629|gb|EGD76199.1| hypothetical protein PTSG_00905 [Salpingoeca sp. ATCC 50818]
Length = 947
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 33 GDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSD 90
G G G M EVI V VP +VG +IG+GG IK + ETGA ++ +D +P +
Sbjct: 382 GYGPGPMMMAPVEVITVRVPAWSVGALIGRGGSNIKHMMEETGAEIRIQNSGDDVEEPLE 441
Query: 91 RRCMLSGSPDQVQEARARI 109
R C++ G+ +Q A A I
Sbjct: 442 RDCVVRGTTEQQVRAHALI 460
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 32/55 (58%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEA 105
VP A VG VIG+GG I+ +Q +TG V+ Q E+ ++ ML GS VQ A
Sbjct: 490 VPAAKVGRVIGRGGATIRDIQQKTGVGVEVQQNEENPEANAAVMLHGSYRSVQAA 544
>gi|449676986|ref|XP_002155841.2| PREDICTED: uncharacterized protein LOC100213921 [Hydra
magnipapillata]
Length = 643
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 8/69 (11%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS-----DRRCMLSGSPDQVQ 103
V +P VG+VIG+GG+MI +LQ+++GA++Q D P DR+ ++GS + V
Sbjct: 37 VSIPNKLVGLVIGRGGEMINRLQSDSGAKIQVA---PDPPPNMMDIDRQITITGSSEAVS 93
Query: 104 EARARIEEL 112
+A+ IE++
Sbjct: 94 KAKQLIEQI 102
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+++ VP G++IGKGG+ +K + ETG ++ + D R L G+ +Q+ +A
Sbjct: 381 MEIDVPANKCGLIIGKGGETLKYMHTETGINIEIKRNVPDSSPFRTFNLRGTDEQISKAE 440
Query: 107 ARIEELI 113
I E +
Sbjct: 441 TFIREKV 447
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPD 100
+V +E IQV P+ AVG +IG G I +Q TG R+QF E + + L G+P
Sbjct: 227 QVGYEEIQV--PREAVGFIIGSKGANINNIQQMTGCRIQFKNEMEGE--FKTATLQGNPQ 282
Query: 101 QVQEARARIEELIDS 115
+ R ++ E++ +
Sbjct: 283 AIVMGREKLLEILQA 297
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRE-DDPSDRRCMLSGSPDQVQEA 105
I++ + VG+VIGKGG+ IK LQ G ++ Q E +++ +SG +V
Sbjct: 124 IEMKIAAGKVGLVIGKGGETIKSLQERAGCKMILFQDGEYAQAAEKPLKISGEQSKVLYG 183
Query: 106 RARIEELIDSVMVE 119
+ +++LI S +E
Sbjct: 184 KQLVQDLIVSKEIE 197
>gi|380026049|ref|XP_003696774.1| PREDICTED: RNA-binding protein Nova-2-like isoform 1 [Apis florea]
Length = 514
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQV 102
++V VP A G +IGKGGD I +LQ +TGARV+ + + P ++R C+++GS + +
Sbjct: 47 LKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGSLEAI 104
Score = 42.4 bits (98), Expect = 0.056, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM 94
+++ VP + G++IGK G+ IK+++ E G+ VQ Q +D RC+
Sbjct: 142 VKILVPNSTAGMIIGKAGNYIKQIKEECGSYVQISQKAKDVSLQERCI 189
>gi|380799967|gb|AFE71859.1| RNA-binding protein Nova-2, partial [Macaca mulatta]
Length = 130
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGS 98
E E++++ VP+ VG ++GKGG + + Q TGAR+Q + E P +RR ++GS
Sbjct: 41 ESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 100
Query: 99 PDQVQEARARIEE 111
P Q A+ I +
Sbjct: 101 PAATQAAQYLISQ 113
>gi|328784994|ref|XP_003250531.1| PREDICTED: RNA-binding protein Nova-2-like [Apis mellifera]
Length = 514
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQV 102
++V VP A G +IGKGGD I +LQ +TGARV+ + + P ++R C+++GS + +
Sbjct: 47 LKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGSLEAI 104
Score = 42.4 bits (98), Expect = 0.057, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM 94
+++ VP + G++IGK G+ IK+++ E G+ VQ Q +D RC+
Sbjct: 142 VKILVPNSTAGMIIGKAGNYIKQIKEECGSYVQISQKAKDVSLQERCI 189
>gi|403358770|gb|EJY79040.1| Far upstream element-binding protein [Oxytricha trifallax]
Length = 495
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/68 (36%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM-LSGSPDQVQEA 105
I +P + G++IGK GD IK+L N+ GA + F+ + D ++ R + LSGS +Q++ A
Sbjct: 348 IPFSIPNSLTGLIIGKNGDTIKQLHNKCGAYI-FIPKQHDHQTNERILELSGSEEQIERA 406
Query: 106 RARIEELI 113
+ I+ L+
Sbjct: 407 KKEIQRLL 414
Score = 43.5 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 37/64 (57%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
+P VG++IGKGG+ I+ LQ ++GA++Q + R + G ++ A+ I+
Sbjct: 253 IPNDCVGLIIGKGGETIRNLQLQSGAKIQVAKKECQGNQIRNVFVEGPQERYDLAKKLID 312
Query: 111 ELID 114
E+++
Sbjct: 313 EIVN 316
>gi|380026051|ref|XP_003696775.1| PREDICTED: RNA-binding protein Nova-2-like isoform 2 [Apis florea]
Length = 522
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQV 102
++V VP A G +IGKGGD I +LQ +TGARV+ + + P ++R C+++GS + +
Sbjct: 47 LKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGSLEAI 104
Score = 42.4 bits (98), Expect = 0.057, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM 94
+++ VP + G++IGK G+ IK+++ E G+ VQ Q +D RC+
Sbjct: 142 VKILVPNSTAGMIIGKAGNYIKQIKEECGSYVQISQKAKDVSLQERCI 189
>gi|340714094|ref|XP_003395567.1| PREDICTED: RNA-binding protein Nova-2-like [Bombus terrestris]
gi|350427987|ref|XP_003494948.1| PREDICTED: RNA-binding protein Nova-2-like [Bombus impatiens]
Length = 514
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQV 102
++V VP A G +IGKGGD I +LQ +TGARV+ + + P ++R C+++GS + +
Sbjct: 47 LKVLVPGVAAGAIIGKGGDTIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGSLEAI 104
Score = 42.4 bits (98), Expect = 0.057, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM 94
+++ VP + G++IGK G+ IK+++ E G+ VQ Q +D RC+
Sbjct: 142 VKILVPNSTAGMIIGKAGNYIKQIKEECGSYVQISQKAKDVSLQERCI 189
>gi|426258121|ref|XP_004022667.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Ovis
aries]
Length = 404
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 60/105 (57%), Gaps = 9/105 (8%)
Query: 24 GNMREFNENGDGRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFV 81
G+ +++ G GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++
Sbjct: 307 GSGYDYSYAG-GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKID 365
Query: 82 QMREDDPSDRRCMLSGSPDQVQEARARIEELIDSVMVEQFSGANF 126
+ E DR ++G+ DQ+Q A+ ++ V+Q+SG F
Sbjct: 366 EPLEGS-EDRIITITGTQDQIQNAQYLLQN-----SVKQYSGKFF 404
>gi|392922650|ref|NP_001256769.1| Protein Y59A8B.10, isoform a [Caenorhabditis elegans]
gi|11065662|emb|CAC14410.1| Protein Y59A8B.10, isoform a [Caenorhabditis elegans]
Length = 413
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 8/132 (6%)
Query: 5 EFQQSRRWQQGIGRNND--NFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGK 62
EF + + QQG+ R D + ++ + G+ GG I++ +P AVG +IGK
Sbjct: 4 EFTEDSKTQQGVKRTQDASDGPANKKAHFGGEEEGG----DHLSIKILIPSNAVGAIIGK 59
Query: 63 GGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQEARARIEELIDSVMVEQ 120
GG+ ++ L+N+ RVQ + E P S+R C++ G + + I++ I +Q
Sbjct: 60 GGEAMRNLKNDNNCRVQMSKNSETYPGTSERICLVKGRLNNIMAVIESIQDKIREKCADQ 119
Query: 121 FSGANFDKLRST 132
FD ++
Sbjct: 120 GGSDAFDHKNTS 131
>gi|193784719|dbj|BAG53872.1| unnamed protein product [Homo sapiens]
gi|193788384|dbj|BAG53278.1| unnamed protein product [Homo sapiens]
Length = 223
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 8/94 (8%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 136 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 194
Query: 93 CMLSGSPDQVQEARARIEELIDSVMVEQFSGANF 126
++G+ DQ+Q A+ ++ V+Q+SG F
Sbjct: 195 ITITGTQDQIQNAQYLLQN-----SVKQYSGKFF 223
>gi|170033323|ref|XP_001844527.1| far upstream binding protein [Culex quinquefasciatus]
gi|167874265|gb|EDS37648.1| far upstream binding protein [Culex quinquefasciatus]
Length = 638
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 41/72 (56%), Gaps = 18/72 (25%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E +V VPK+AVG+VI KGGDMIKK+Q + R +GS QV+E
Sbjct: 172 EQAEVFVPKSAVGIVIFKGGDMIKKIQ------------------ENRAQAAGSRAQVEE 213
Query: 105 ARARIEELIDSV 116
+ IEELI+SV
Sbjct: 214 GKRMIEELIESV 225
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQF-VQMREDDPSDRRCMLSGSP 99
+VT E VP G++IG+GGD IK++ ++GA + + + +++ G P
Sbjct: 281 QVTREEYTFAVPVNKCGIIIGRGGDTIKQINQQSGAHTEMDRKASANQTTEKTFTCKGEP 340
Query: 100 DQVQEARARIEELIDSVMVEQFSGAN 125
Q++EA+ I++ I+ + Q+ G++
Sbjct: 341 HQIEEAKRLIQDKINMEINMQYVGSS 366
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 28/35 (80%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ 82
++ +P + VG++IGKGG+ IK+LQ ++GA++ +Q
Sbjct: 101 EIMIPGSKVGLIIGKGGETIKQLQEKSGAKMVIIQ 135
>gi|426389287|ref|XP_004061055.1| PREDICTED: RNA-binding protein Nova-1-like [Gorilla gorilla
gorilla]
Length = 416
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGS 98
E E++++ VP+ VG ++GKGG + + Q TGAR+Q + E P +RR ++GS
Sbjct: 327 ESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 386
Query: 99 PDQVQEARARIEELI 113
P Q A+ I + +
Sbjct: 387 PAATQAAQYLISQRV 401
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 69 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 128
Query: 105 ARARIEELIDSV 116
+ I E + +
Sbjct: 129 VHSFIAEKVREI 140
>gi|392337608|ref|XP_001075246.3| PREDICTED: RNA-binding protein Nova-2 [Rattus norvegicus]
Length = 560
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGS 98
E E++++ VP+ VG ++GKGG + + Q TGAR+Q + E P +RR ++GS
Sbjct: 471 ESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 530
Query: 99 PDQVQEARARIEELI 113
P Q A+ I + +
Sbjct: 531 PAATQAAQYLISQRV 545
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 120 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 179
Query: 105 ARARIEELIDSV 116
A + I E + +
Sbjct: 180 AHSFIAEKVREI 191
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEAR 106
++ VP + G++IGKGG +K + ++GA VQ Q E + +R +SG P+QV +A
Sbjct: 219 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAV 278
Query: 107 ARI 109
+ I
Sbjct: 279 SAI 281
>gi|121222495|gb|ABM47639.1| FUBP3 [Saguinus labiatus]
Length = 77
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R C+L+G+P+ +++A+ +
Sbjct: 9 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIP-ERPCVLTGTPESIEQAKRLLG 67
Query: 111 ELID 114
+++D
Sbjct: 68 QIVD 71
>gi|194374941|dbj|BAG62585.1| unnamed protein product [Homo sapiens]
Length = 364
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
I V VP+ +VGVVIG+ G+MIKK+QN+ G R+QF Q P ++ + G PD+ +
Sbjct: 281 IDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGP-EKIAHIMGPPDRCEH 337
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q ++G +VQ P +R L+G+P+ Q+A+ ++
Sbjct: 107 VPNGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-ERSVSLTGAPESAQKAKMMLD 165
Query: 111 ELI 113
+++
Sbjct: 166 DIV 168
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 24 GNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ- 82
G +F++N +G G E++ +P G+VIGKGG+ IK+LQ G ++ +Q
Sbjct: 174 GPPGQFHDNANG--GQNGTVQEIM---IPAGKAGLVIGKGGETIKQLQERAGVKMILIQD 228
Query: 83 MREDDPSDRRCMLSGSPDQVQEA 105
++ D+ + G P +VQ+A
Sbjct: 229 GSQNTNVDKPLRIIGDPYKVQQA 251
>gi|171677065|ref|XP_001903484.1| hypothetical protein [Podospora anserina S mat+]
gi|170936600|emb|CAP61259.1| unnamed protein product [Podospora anserina S mat+]
Length = 474
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 42/69 (60%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ VP AVG++IGKGG+ I+++QN TG ++ Q ++R L GS D ++ A+
Sbjct: 375 IYVPSDAVGMIIGKGGETIREMQNTTGCKINVSQSSGSGETEREIGLVGSRDSIERAKVA 434
Query: 109 IEELIDSVM 117
I E +++ +
Sbjct: 435 IREKVEAAV 443
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 41/81 (50%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
+ + + VP VG++IG+GG+ I+ LQ +G + V + R L G+P +
Sbjct: 273 DTLVIMVPDRTVGLIIGRGGETIRDLQERSGCHINIVSENKSVNGLRPVNLIGTPAATKN 332
Query: 105 ARARIEELIDSVMVEQFSGAN 125
A+ I E++DS +G N
Sbjct: 333 AKELILEIVDSDSRNTATGGN 353
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
V K+ VG++IG+ G+ ++++++E+ RVQF+ + R C ++G+ Q +EA+A I
Sbjct: 168 VEKSLVGLIIGRQGENLRRVESESRCRVQFINAENEAEPYRVCRITGARAQREEAKAMIN 227
Query: 111 ELI-DSVM 117
+I DS M
Sbjct: 228 RIIADSGM 235
>gi|392344006|ref|XP_002728759.2| PREDICTED: RNA-binding protein Nova-2 [Rattus norvegicus]
Length = 576
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGS 98
E E++++ VP+ VG ++GKGG + + Q TGAR+Q + E P +RR ++GS
Sbjct: 487 ESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 546
Query: 99 PDQVQEARARIEELI 113
P Q A+ I + +
Sbjct: 547 PAATQAAQYLISQRV 561
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 119 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 178
Query: 105 ARARIEELIDSV 116
A + I E + +
Sbjct: 179 AHSFIAEKVREI 190
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEAR 106
++ VP + G++IGKGG +K + ++GA VQ Q E + +R +SG P+QV +A
Sbjct: 218 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAV 277
Query: 107 ARI 109
+ I
Sbjct: 278 SAI 280
>gi|260064185|gb|ACX30053.1| MIP13670p [Drosophila melanogaster]
Length = 346
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGS 98
E T+ +++ VP A G +IGKGG+ I LQ +TGARV+ + + P ++R C+++GS
Sbjct: 143 ETTYH-MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGS 201
Query: 99 PDQV 102
+ +
Sbjct: 202 TEAI 205
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM 94
+++ VP + G++IGKGG IK+++ E+G+ VQ Q D RC+
Sbjct: 241 VKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPTDVSLQERCI 288
>gi|256078989|ref|XP_002575774.1| far upstream (fuse) binding protein [Schistosoma mansoni]
gi|360043995|emb|CCD81541.1| putative far upstream (fuse) binding protein [Schistosoma mansoni]
Length = 530
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
I++ VP G+VIGK G+ IK LQ E G ++ +Q + P D+ +SG P +V++A
Sbjct: 187 IEMMVPGLKAGLVIGKNGETIKNLQEENGVKMVLIQQSNNPTPEDKPLRISGEPARVEKA 246
Query: 106 RARIEELIDS 115
R + LI+S
Sbjct: 247 RQAVLVLINS 256
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
+ +P VG+VIGKGG+ I +LQN+T +VQ Q +R L+G+P Q+ A+
Sbjct: 102 ETAIPDRYVGLVIGKGGEQITQLQNDTQCKVQISQA---GTPERTVTLTGTPQQIDHAKQ 158
Query: 108 RIEELID 114
I ++I+
Sbjct: 159 MIGDIIE 165
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 37/67 (55%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E Q VP G+VIGKGG+ IK++ +GA V+ + DPS + + G+ ++++
Sbjct: 272 ETSQYAVPAEKAGLVIGKGGESIKEICRVSGAHVEISKEPPPDPSIKIFNVRGNRQEIEQ 331
Query: 105 ARARIEE 111
A I E
Sbjct: 332 AIRMISE 338
>gi|360043994|emb|CCD81540.1| putative far upstream (fuse) binding protein [Schistosoma mansoni]
Length = 527
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
I++ VP G+VIGK G+ IK LQ E G ++ +Q + P D+ +SG P +V++A
Sbjct: 184 IEMMVPGLKAGLVIGKNGETIKNLQEENGVKMVLIQQSNNPTPEDKPLRISGEPARVEKA 243
Query: 106 RARIEELIDS 115
R + LI+S
Sbjct: 244 RQAVLVLINS 253
Score = 41.6 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
+ +P VG +GKGG+ I +LQN+T +VQ Q +R L+G+P Q+ A+
Sbjct: 101 ETAIPDRYVG--LGKGGEQITQLQNDTQCKVQISQA---GTPERTVTLTGTPQQIDHAKQ 155
Query: 108 RIEELID 114
I ++I+
Sbjct: 156 MIGDIIE 162
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 37/67 (55%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E Q VP G+VIGKGG+ IK++ +GA V+ + DPS + + G+ ++++
Sbjct: 269 ETSQYAVPAEKAGLVIGKGGESIKEICRVSGAHVEISKEPPPDPSIKIFNVRGNRQEIEQ 328
Query: 105 ARARIEE 111
A I E
Sbjct: 329 AIRMISE 335
>gi|328785476|ref|XP_623872.3| PREDICTED: tudor and KH domain-containing protein-like isoform 2
[Apis mellifera]
Length = 607
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/70 (42%), Positives = 43/70 (61%), Gaps = 5/70 (7%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP+ V VIG+GG MIK +QN++G ++ F + D P DR C++ GS + V A E
Sbjct: 56 VPRQFVPAVIGRGGSMIKDIQNKSGTQIHFKEDNIDCP-DRICIIKGSYEGVHLA----E 110
Query: 111 ELIDSVMVEQ 120
E+I SV+ Q
Sbjct: 111 EMIKSVIQNQ 120
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARV--QFVQMREDDPSDRRCMLSGSPDQV 102
E ++ VP+ A G +IG+GG++I ++Q + A+V + D ++RR ++ G+ +Q+
Sbjct: 124 ETYEMYVPQRACGRIIGRGGEVIHQIQATSSAKVIIESSYTPYDPNAERRIIIKGTAEQI 183
Query: 103 QEARARIEELI 113
A +IE+ +
Sbjct: 184 ATALLQIEDKV 194
>gi|154287628|ref|XP_001544609.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150408250|gb|EDN03791.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 634
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/65 (44%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
+P AVG++IGKGGD IK++Q TG R+ +Q +DR L GS ++EA+ I
Sbjct: 466 IPPDAVGMIIGKGGDTIKEMQAVTGCRIN-IQSPVGRDADREVTLVGSRGAIEEAKRMIM 524
Query: 111 ELIDS 115
E IDS
Sbjct: 525 EKIDS 529
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 40/71 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
+ +++ VP VG++IG+GG+ I+ LQ +G V V + R L GSPD +
Sbjct: 359 DAVRIMVPDRTVGLIIGRGGETIRDLQERSGCHVNIVNENKSINGLRPVNLIGSPDATER 418
Query: 105 ARARIEELIDS 115
A+ I E+++S
Sbjct: 419 AKNLILEIVES 429
Score = 43.5 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ V + VG++IG+ G+ +++++++TG R+QF+ + S R C ++GS + +A
Sbjct: 263 ISVESSLVGLIIGRQGESLRRIESDTGTRIQFLDNADPSSSVRLCKITGSRVARGDVKAE 322
Query: 109 IEELIDSVMVEQFSGANFDK 128
I +I + SG D+
Sbjct: 323 ITRIISETSASR-SGTRTDR 341
>gi|226529800|ref|NP_001141507.1| uncharacterized protein LOC100273619 [Zea mays]
gi|194704864|gb|ACF86516.1| unknown [Zea mays]
gi|223950149|gb|ACN29158.1| unknown [Zea mays]
gi|413941634|gb|AFW74283.1| hypothetical protein ZEAMMB73_757154 [Zea mays]
Length = 702
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 9/97 (9%)
Query: 31 ENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS- 89
+ GD + E++ ++ VP + VGVVIGK G+ I+ LQ +GA++Q + E D +
Sbjct: 133 QEGDAATAVQEISR---KIEVPNSKVGVVIGKAGETIRNLQISSGAKIQITKDIEADSNA 189
Query: 90 -DRRCMLSGSPDQVQEARARIEELIDSVMVEQFSGAN 125
R L G+P V +A E+LI SV+ E +G +
Sbjct: 190 LTRPVELVGTPGSVDKA----EQLIKSVIAEAEAGGS 222
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP---SDRRCMLSGSPDQ 101
E ++ VP VG++IGKGG+ IK +Q ++GAR+Q + + ++R ++G+ Q
Sbjct: 238 EQFEMTVPDNKVGLIIGKGGETIKGMQTKSGARIQLIPQHPPEGVTLTERIVRVTGNKKQ 297
Query: 102 VQEARARIEELIDSVMVEQFS 122
++ A+ +LI M + FS
Sbjct: 298 IEAAK----DLIKQAMNQTFS 314
>gi|219886695|gb|ACL53722.1| unknown [Zea mays]
Length = 702
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 9/97 (9%)
Query: 31 ENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS- 89
+ GD + E++ ++ VP + VGVVIGK G+ I+ LQ +GA++Q + E D +
Sbjct: 133 QEGDAATAVQEISR---KIEVPNSKVGVVIGKAGETIRNLQISSGAKIQITKDIEADSNA 189
Query: 90 -DRRCMLSGSPDQVQEARARIEELIDSVMVEQFSGAN 125
R L G+P V +A E+LI SV+ E +G +
Sbjct: 190 LTRPVELVGTPGSVDKA----EQLIKSVIAEAEAGGS 222
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP---SDRRCMLSGSPDQ 101
E ++ VP VG++IGKGG+ IK +Q ++GAR+Q + + ++R ++G+ Q
Sbjct: 238 EQFEMTVPDNKVGLIIGKGGETIKGMQTKSGARIQLIPQHPPEGVTLTERIVRVTGNKKQ 297
Query: 102 VQEARARIEELIDSVMVEQFS 122
++ A+ +LI M + FS
Sbjct: 298 IEAAK----DLIKQAMNQTFS 314
>gi|14043859|gb|AAH07874.1| FUBP3 protein [Homo sapiens]
Length = 261
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R C+L+G+P+ +++A+ +
Sbjct: 24 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIP-ERPCVLTGTPESIEQAKRLLG 82
Query: 111 ELID 114
+++D
Sbjct: 83 QIVD 86
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 29/34 (85%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQF 80
I+V VP+ AVG+VIG+ G+MIKK+QN+ G R+QF
Sbjct: 196 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQF 229
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 7/86 (8%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--- 88
NG G + + ++ +P + VG+VIG+GG+ IK+LQ TG ++ +Q D P
Sbjct: 90 NGPGFHNDIDSNSTIQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQ---DGPLPT 146
Query: 89 -SDRRCMLSGSPDQVQEARARIEELI 113
+D+ ++G +VQ+AR + E+I
Sbjct: 147 GADKPLRITGDAFKVQQAREMVLEII 172
>gi|315042996|ref|XP_003170874.1| far upstream element-binding protein 3 [Arthroderma gypseum CBS
118893]
gi|311344663|gb|EFR03866.1| far upstream element-binding protein 3 [Arthroderma gypseum CBS
118893]
Length = 564
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 42/59 (71%)
Query: 56 VGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
VG++IG+ G+ +++++NETGARVQF+ E + + R C L+G+ +ARA I+ +++
Sbjct: 200 VGLIIGRQGENLRRIENETGARVQFLDSAEHNKAIRLCRLTGTKSVRDKARAEIDRVVN 258
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E ++ VP VG+VIG+ G+ ++ L +G R+ + E R L+GS +Q
Sbjct: 285 ETTKIMVPDRTVGLVIGRSGETVRDLAERSGCRINIARDGESINGLRPVTLTGSQQTIQR 344
Query: 105 ARARIEELIDS 115
A+ I +++S
Sbjct: 345 AKELILGIVES 355
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 29/41 (70%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP 88
++ +PK VG+VIGKGG+ I++LQ+ +G ++ + + +P
Sbjct: 386 KMFIPKEYVGMVIGKGGETIRELQSLSGCKINILPLVGREP 426
>gi|440638759|gb|ELR08678.1| hypothetical protein GMDG_03364 [Geomyces destructans 20631-21]
Length = 572
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ VP AVG++IGKGG+ IK +QN TG ++ +R L GS D ++ A+
Sbjct: 417 IYVPSEAVGMIIGKGGETIKDMQNTTGCKINVTPSSGPGEVEREIGLVGSRDSIERAKLA 476
Query: 109 IEELIDSVMVE 119
IE+ +++V ++
Sbjct: 477 IEDKVEAVQLK 487
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 39/59 (66%)
Query: 56 VGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
VG++IG+ G+ +++++ ET RVQF+ + E++ R+C +SG + EA A I +ID
Sbjct: 215 VGLIIGRQGENLRRVEAETACRVQFIPISEENGPFRQCKISGPRARRAEAIAEINRIID 273
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+Q+ VP VG++IG+GG+ I+ LQ +G V V ++ R L GS + +A+
Sbjct: 311 MQIMVPDRTVGLIIGRGGETIRDLQERSGCHVNIVGEQKSVNGLRPVNLIGSREAAAQAK 370
Query: 107 ARIEELIDS 115
I E+++S
Sbjct: 371 DLIMEIVES 379
>gi|22218811|pdb|1J5K|A Chain A, Complex Of The Kh3 Domain Of Hnrnp K With A
Single_stranded 10mer Dna Oligonucleotide
Length = 89
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 14/83 (16%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP----SDRRCMLSGSPDQVQ 103
QV +PK G +IGKGG IK++++E+GA ++ D+P DR ++G+ DQ+Q
Sbjct: 17 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-----DEPLEGSEDRIITITGTQDQIQ 71
Query: 104 EARARIEELIDSVMVEQFSGANF 126
A+ ++ V+Q+SG F
Sbjct: 72 NAQYLLQN-----SVKQYSGKFF 89
>gi|395529320|ref|XP_003766764.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein K-like [Sarcophilus harrisii]
Length = 474
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 47/79 (59%), Gaps = 3/79 (3%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
QV +PK G +IGKGG IK+L++E+GA ++ + E DR ++G+ DQ+Q A
Sbjct: 399 QVTIPKDLAGSIIGKGGQRIKQLRHESGASIKIDEPLEGS-EDRIITITGTQDQIQNAXY 457
Query: 108 RIEELIDSVMVEQFSGANF 126
++ + V+Q+SG F
Sbjct: 458 LLQNSVKH--VKQYSGKFF 474
>gi|402906002|ref|XP_003915796.1| PREDICTED: RNA-binding protein Nova-2 [Papio anubis]
Length = 618
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGS 98
E E++++ VP+ VG ++GKGG + + Q TGAR+Q + E P +RR ++GS
Sbjct: 529 ESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 588
Query: 99 PDQVQEARARIEELI 113
P Q A+ I + +
Sbjct: 589 PAATQAAQYLISQRV 603
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 161 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 220
Query: 105 ARARIEELIDSV 116
+ I E + +
Sbjct: 221 VHSFIAEKVREI 232
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEAR 106
++ VP + G++IGKGG +K + ++GA VQ Q E + +R +SG P+QV +A
Sbjct: 260 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAV 319
Query: 107 ARI 109
+ I
Sbjct: 320 SAI 322
>gi|225000564|gb|AAI72604.1| Neuro-oncological ventral antigen 2 [synthetic construct]
Length = 583
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGS 98
E E++++ VP+ VG ++GKGG + + Q TGAR+Q + E P +RR ++GS
Sbjct: 494 ESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 553
Query: 99 PDQVQEARARIEELI 113
P Q A+ I + +
Sbjct: 554 PAATQAAQYLISQRV 568
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 126 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 185
Query: 105 ARARIEELIDSV 116
+ I E + +
Sbjct: 186 VHSFIAEKVREI 197
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEAR 106
++ VP + G++IGKGG +K + ++GA VQ Q E + +R +SG P+QV +A
Sbjct: 225 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAV 284
Query: 107 ARI 109
+ I
Sbjct: 285 SAI 287
>gi|189441939|gb|AAI67653.1| LOC100170586 protein [Xenopus (Silurana) tropicalis]
Length = 449
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q E+G +VQ P +R L+GSPD VQ+A+ ++
Sbjct: 100 VPDGMVGLIIGRGGEQINKIQQESGCKVQISPDSGGMP-ERVVSLTGSPDSVQKAKMLLD 158
Query: 111 ELI 113
+++
Sbjct: 159 DIV 161
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 56/106 (52%), Gaps = 12/106 (11%)
Query: 24 GNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ- 82
G +F++N +G+ G + ++ +P G++IGKGG+ IK+LQ G ++ +Q
Sbjct: 167 GPPSQFHDNSNGQNGSLQ------EIMIPAGKAGLIIGKGGETIKQLQERAGVKMILIQD 220
Query: 83 MREDDPSDRRCMLSGSPDQVQEARARIEELIDSVMVEQFSGANFDK 128
++ D+ + G P +VQ+A + +L+ + ANFD+
Sbjct: 221 GSQNTNMDKPLRIVGEPFKVQQACEMVMDLL-----RERDQANFDR 261
>gi|355707688|gb|AES03034.1| neuro-oncological ventral antigen 2 [Mustela putorius furo]
Length = 95
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGS 98
E E++++ VP+ VG ++GKGG + + Q TGAR+Q + E P +RR ++GS
Sbjct: 6 ESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 65
Query: 99 PDQVQEARARIEE 111
P Q A+ I +
Sbjct: 66 PAATQAAQYLISQ 78
>gi|300120395|emb|CBK19949.2| unnamed protein product [Blastocystis hominis]
Length = 438
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSDRRCMLSGSPDQVQEAR 106
+V VP VG+VIG+ G +IK+L ++T ++Q + + DP+ R +++G P V EA+
Sbjct: 108 KVAVPNDKVGLVIGRDGCVIKELMSKTSTQIQVPRDPDKKDPTKRYIIITGDPKNVLEAK 167
Query: 107 ARIEELIDSVM 117
I+++ID M
Sbjct: 168 KHIQDIIDGQM 178
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 34 DGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDR 91
DG+ G V + VP VG+VIGK G +IK +Q+++ A +Q + P R
Sbjct: 175 DGQMGSIPPDVPVCTITVPDDKVGLVIGKKGTIIKDIQSKSHAYIQIPGKPVEGIYPPVR 234
Query: 92 RCMLSGSPDQVQEARARIEELIDSVM 117
+ G+ +Q Q A+A I+ +I + +
Sbjct: 235 VINIGGTEEQQQLAKAEIQRMIGTTV 260
>gi|308495618|ref|XP_003109997.1| hypothetical protein CRE_06433 [Caenorhabditis remanei]
gi|308244834|gb|EFO88786.1| hypothetical protein CRE_06433 [Caenorhabditis remanei]
Length = 476
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 43/69 (62%), Gaps = 4/69 (5%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEAR 106
V VP+++VG +IG G IKK+ +ET ++QF M +DDPS +R ML G V A
Sbjct: 253 VKVPRSSVGKIIGVKGQSIKKIMDETKTKIQF--MPDDDPSLMERSLMLMGKTSSVTVAA 310
Query: 107 ARIEELIDS 115
+++++DS
Sbjct: 311 HLLKQIVDS 319
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 40/64 (62%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEA 105
V + +P + VG+VIG+GG++IK++ E+GA + + DP ++ ++ GS QV+ A
Sbjct: 330 VFYMSIPTSKVGLVIGRGGEIIKQINAESGAHCELSRETGKDPHEKTFVIRGSDVQVEHA 389
Query: 106 RARI 109
+ I
Sbjct: 390 KHLI 393
>gi|256078991|ref|XP_002575775.1| far upstream (fuse) binding protein [Schistosoma mansoni]
gi|360043996|emb|CCD81542.1| putative far upstream (fuse) binding protein [Schistosoma mansoni]
Length = 372
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD-PSDRRCMLSGSPDQVQE 104
I++ VP G+VIGK G+ IK LQ E G ++ +Q + P D+ +SG P +V++
Sbjct: 28 TIEMMVPGLKAGLVIGKNGETIKNLQEENGVKMVLIQQSNNPTPEDKPLRISGEPARVEK 87
Query: 105 ARARIEELIDS 115
AR + LI+S
Sbjct: 88 ARQAVLVLINS 98
Score = 38.9 bits (89), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E Q VP G+VIGKGG+ IK++ +GA V+ + DPS + + G+ ++++
Sbjct: 114 ETSQYAVPAEKAGLVIGKGGESIKEICRVSGAHVEISKEPPPDPSIKIFNVRGNRQEIEQ 173
Query: 105 ARARIEE 111
A I E
Sbjct: 174 AIRMISE 180
>gi|145336377|ref|NP_174629.3| far upstream element-binding protein [Arabidopsis thaliana]
gi|110739541|dbj|BAF01679.1| putative single-strand nucleic acid-binding protein [Arabidopsis
thaliana]
gi|110739658|dbj|BAF01737.1| putative single-strand nucleic acid-binding protein [Arabidopsis
thaliana]
gi|110739944|dbj|BAF01877.1| putative single-strand nucleic acid-binding protein [Arabidopsis
thaliana]
gi|332193492|gb|AEE31613.1| far upstream element-binding protein [Arabidopsis thaliana]
Length = 763
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM-LSGSPDQVQ 103
E +++ VP VGV+IG+GG+ IK +Q ++ AR+Q + E D S R + +SG Q+
Sbjct: 320 EQMEIKVPSDKVGVIIGRGGETIKNMQTKSRARIQLIPQNEGDASKERTVRISGDKRQID 379
Query: 104 EARARIEELI 113
A A I++++
Sbjct: 380 IATALIKDVM 389
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 49/79 (62%), Gaps = 6/79 (7%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSD--RRCMLSGSPDQVQEA 105
++ VP + VG +IGKGG+M++ LQ +GA++Q + E DPS R + G+ +++A
Sbjct: 235 RIDVPSSKVGTLIGKGGEMVRYLQVNSGAKIQIRRDAEADPSSALRPVEIIGTVSCIEKA 294
Query: 106 RARIEELIDSVMVEQFSGA 124
E+LI++V+ E +G
Sbjct: 295 ----EKLINAVIAEVEAGG 309
>gi|4539010|emb|CAB39631.1| putative DNA-directed RNA polymerase [Arabidopsis thaliana]
gi|7267703|emb|CAB78130.1| putative DNA-directed RNA polymerase [Arabidopsis thaliana]
Length = 748
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/106 (34%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 25 NMREFNENGDGRGGMWEV---TWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFV 81
N +E N+ DG EV ++ VP + VGV+IGKGG+ I+ LQ +GA++Q +
Sbjct: 176 NGKEENKEVDGEKSQKEVDGTQSTTRRIDVPSSKVGVLIGKGGETIRYLQFNSGAKIQIL 235
Query: 82 QMREDDPSD--RRCMLSGSPDQVQEARARIEELIDSVMVEQFSGAN 125
+ E DPS R + GS ++ A E+LI +V+ E +G +
Sbjct: 236 RDSEADPSSALRPVEIIGSVACIESA----EKLISAVIAEAEAGGS 277
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFV-QMREDDP-SDRRCMLSGSPDQV 102
E I++ VP VG++IG+GG+ IK +Q +GAR Q + Q E D +R +SG Q+
Sbjct: 295 EQIEIKVPNDKVGLIIGRGGETIKNMQTRSGARTQLIPQHAEGDGLKERTVRISGDKMQI 354
Query: 103 QEARARIEELID 114
A I+++++
Sbjct: 355 DIATDMIKDVMN 366
>gi|4235140|gb|AAD13116.1| RNA-binding protein Nova-2 [AA 29-492] [Homo sapiens]
Length = 464
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGS 98
E E++++ VP+ VG ++GKGG + + Q TGAR+Q + E P +RR ++GS
Sbjct: 375 ESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 434
Query: 99 PDQVQEARARIEELI 113
P Q A+ I + +
Sbjct: 435 PAATQAAQYLISQRV 449
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 7 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 66
Query: 105 ARARIEELIDSV 116
+ I E + +
Sbjct: 67 VHSFIAEKVREI 78
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEAR 106
++ VP + G++IGKGG +K + ++GA VQ Q E + +R +SG P+QV +A
Sbjct: 106 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAV 165
Query: 107 ARI 109
+ I
Sbjct: 166 SAI 168
>gi|119577801|gb|EAW57397.1| neuro-oncological ventral antigen 2 [Homo sapiens]
Length = 556
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGS 98
E E++++ VP+ VG ++GKGG + + Q TGAR+Q + E P +RR ++GS
Sbjct: 467 ESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 526
Query: 99 PDQVQEARARIEELI 113
P Q A+ I + +
Sbjct: 527 PAATQAAQYLISQRV 541
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 99 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 158
Query: 105 ARARIEELIDSV 116
+ I E + +
Sbjct: 159 VHSFIAEKVREI 170
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEAR 106
++ VP + G++IGKGG +K + ++GA VQ Q E + +R +SG P+QV +A
Sbjct: 198 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAV 257
Query: 107 ARI 109
+ I
Sbjct: 258 SAI 260
>gi|2673961|gb|AAB88661.1| astrocytic NOVA-like RNA-binding protein [Homo sapiens]
Length = 498
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGS 98
E E++++ VP+ VG ++GKGG + + Q TGAR+Q + E P +RR ++GS
Sbjct: 409 ESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 468
Query: 99 PDQVQEARARIEELI 113
P Q A+ I + +
Sbjct: 469 PAATQAAQYLISQRV 483
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 41 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 100
Query: 105 ARARIEELIDSV 116
+ I E + +
Sbjct: 101 VHSFIAEKVREI 112
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEAR 106
++ VP + G++IGKGG +K + ++GA VQ Q E + +R +SG P+QV +A
Sbjct: 140 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAV 199
Query: 107 ARI 109
+ I
Sbjct: 200 SAI 202
>gi|296477630|tpg|DAA19745.1| TPA: neuro-oncological ventral antigen 2-like [Bos taurus]
Length = 640
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGS 98
E E++++ VP+ VG ++GKGG + + Q TGAR+Q + E P +RR ++GS
Sbjct: 551 ESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 610
Query: 99 PDQVQEARARIEELI 113
P Q A+ I + +
Sbjct: 611 PAATQAAQYLISQRV 625
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 183 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 242
Query: 105 ARARIEELIDSV 116
+ I E + +
Sbjct: 243 VHSFIAEKVREI 254
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEAR 106
++ VP + G++IGKGG +K + ++GA VQ Q E + +R +SG P+QV +A
Sbjct: 282 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAV 341
Query: 107 ARI 109
+ I
Sbjct: 342 SAI 344
>gi|351697928|gb|EHB00847.1| RNA-binding protein Nova-2 [Heterocephalus glaber]
Length = 320
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
E++++ VP+ VG ++GKGG + + Q TGAR+Q + E P +RR ++GSP
Sbjct: 200 ELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAAT 259
Query: 103 QEARARIEE 111
Q A+ I +
Sbjct: 260 QAAQYLISQ 268
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 28 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 87
Query: 105 ARARIEELIDSV 116
+ I E + +
Sbjct: 88 VHSFIAEKVREI 99
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEAR 106
++ VP + G++IGKGG +K + ++GA VQ Q E + +R +SG P+QV +A
Sbjct: 127 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAV 186
Query: 107 ARI---------EELIDSVMVEQFSGANFDK 128
+ I +EL++ + E GA K
Sbjct: 187 SAIVQKLAAESAKELVEIAVPENLVGAILGK 217
>gi|335289843|ref|XP_003127279.2| PREDICTED: RNA-binding protein Nova-2 [Sus scrofa]
Length = 492
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGS 98
E E++++ VP+ VG ++GKGG + + Q TGAR+Q + E P +RR ++GS
Sbjct: 403 ESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 462
Query: 99 PDQVQEARARIEELI 113
P Q A+ I + +
Sbjct: 463 PAATQAAQYLISQRV 477
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 94
Query: 105 ARARIEELIDSV 116
+ I E + +
Sbjct: 95 VHSFIAEKVREI 106
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEAR 106
++ VP + G++IGKGG +K + ++GA VQ Q E + +R +SG P+QV +A
Sbjct: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAV 193
Query: 107 ARI 109
+ I
Sbjct: 194 SAI 196
>gi|395854336|ref|XP_003799652.1| PREDICTED: RNA-binding protein Nova-2, partial [Otolemur garnettii]
Length = 487
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGS 98
E E++++ VP+ VG ++GKGG + + Q TGAR+Q + E P +RR ++GS
Sbjct: 398 ESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 457
Query: 99 PDQVQEARARIEELI 113
P Q A+ I + +
Sbjct: 458 PAATQAAQYLISQRV 472
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 30 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 89
Query: 105 ARARIEELIDSV 116
+ I E + +
Sbjct: 90 VHSFIAEKVREI 101
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEAR 106
++ VP + G++IGKGG +K + ++GA VQ Q E + +R +SG P+QV +A
Sbjct: 129 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAV 188
Query: 107 ARI 109
+ I
Sbjct: 189 SAI 191
>gi|291219869|ref|NP_001025048.2| neuro-oncological ventral antigen 2 [Mus musculus]
Length = 492
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGS 98
E E++++ VP+ VG ++GKGG + + Q TGAR+Q + E P +RR ++GS
Sbjct: 403 ESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 462
Query: 99 PDQVQEARARIEELI 113
P Q A+ I + +
Sbjct: 463 PAATQAAQYLISQRV 477
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 94
Query: 105 ARARIEELIDSV 116
+ I E + +
Sbjct: 95 VHSFIAEKVREI 106
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEAR 106
++ VP + G++IGKGG +K + ++GA VQ Q E + +R +SG P+QV +A
Sbjct: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAV 193
Query: 107 ARI 109
+ I
Sbjct: 194 SAI 196
>gi|82540955|ref|XP_724754.1| RNA-binding protein Nova-2 [Plasmodium yoelii yoelii 17XNL]
gi|23479512|gb|EAA16319.1| RNA-binding protein Nova-2 [Plasmodium yoelii yoelii]
Length = 338
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
++ VPK+AV +IGKGG IK+LQN+TG ++Q V RE +R + GS +++
Sbjct: 110 RIVVPKSAVSAIIGKGGYQIKQLQNKTGTKIQ-VSNRECGLYERIITIVGSFASIKDTAT 168
Query: 108 RIEELIDS 115
++ E I +
Sbjct: 169 KVIEAIQT 176
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQE 104
I + +P +G VIGK G + + N TGA+++ + E P DR+ + G+ V
Sbjct: 259 ISIEIPDKFIGSVIGKNGSRLTNIMNSTGAKIKISKKGELIPGTFDRKTKIIGTVAAVHA 318
Query: 105 ARARIEELIDSVMVE 119
A + + ++S ++
Sbjct: 319 AHVLVLQCLESAYMQ 333
>gi|291415485|ref|XP_002723980.1| PREDICTED: neuro-oncological ventral antigen 2 [Oryctolagus
cuniculus]
Length = 492
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGS 98
E E++++ VP+ VG ++GKGG + + Q TGAR+Q + E P +RR ++GS
Sbjct: 403 ESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 462
Query: 99 PDQVQEARARIEELI 113
P Q A+ I + +
Sbjct: 463 PAATQAAQYLISQRV 477
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 94
Query: 105 ARARIEELIDSV 116
+ I E + +
Sbjct: 95 VHSFIAEKVREI 106
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEAR 106
++ VP + G++IGKGG +K + ++GA VQ Q E + +R +SG P+QV +A
Sbjct: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAV 193
Query: 107 ARI 109
+ I
Sbjct: 194 SAI 196
>gi|75765942|pdb|1ZZI|A Chain A, Crystal Structure Analysis Of The Third Kh Domain Of Hnrnp
K In Complex With Ssdna
gi|75765943|pdb|1ZZI|B Chain B, Crystal Structure Analysis Of The Third Kh Domain Of Hnrnp
K In Complex With Ssdna
gi|75765946|pdb|1ZZJ|A Chain A, Structure Of The Third Kh Domain Of Hnrnp K In Complex
With 15-Mer Ssdna
gi|75765947|pdb|1ZZJ|B Chain B, Structure Of The Third Kh Domain Of Hnrnp K In Complex
With 15-Mer Ssdna
gi|75765948|pdb|1ZZJ|C Chain C, Structure Of The Third Kh Domain Of Hnrnp K In Complex
With 15-Mer Ssdna
gi|75765950|pdb|1ZZK|A Chain A, Crystal Structure Of The Third Kh Domain Of Hnrnp K At
0.95a Resolution
Length = 82
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 14/83 (16%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP----SDRRCMLSGSPDQVQ 103
QV +PK G +IGKGG IK++++E+GA ++ D+P DR ++G+ DQ+Q
Sbjct: 10 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-----DEPLEGSEDRIITITGTQDQIQ 64
Query: 104 EARARIEELIDSVMVEQFSGANF 126
A+ ++ V+Q+SG F
Sbjct: 65 NAQYLLQN-----SVKQYSGKFF 82
>gi|327295298|ref|XP_003232344.1| hypothetical protein TERG_07192 [Trichophyton rubrum CBS 118892]
gi|326465516|gb|EGD90969.1| hypothetical protein TERG_07192 [Trichophyton rubrum CBS 118892]
Length = 563
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 8/93 (8%)
Query: 27 REFNENGD------GRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQF 80
R + GD RG E E I++ VG++IG+ G+ +++++NETGARVQF
Sbjct: 168 RHYRAGGDRSPPPRNRGPGSEENNETIEID--NKHVGLIIGRQGENLRRIENETGARVQF 225
Query: 81 VQMREDDPSDRRCMLSGSPDQVQEARARIEELI 113
+ E + + R C LSG +A+A I+ ++
Sbjct: 226 LDSAEHNKTIRLCRLSGPKSIRDKAKAEIDRIV 258
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 34 DGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRC 93
DGR G + + + ++ VP VG+VIG+ G+ ++ L +G R+ + E R
Sbjct: 274 DGRPGDADGS-DTTKIMVPDRTVGLVIGRSGETVRDLAERSGCRINIARDGESINGLRPV 332
Query: 94 MLSGSPDQVQEARARIEELIDS 115
L+GS +Q A+ I +++S
Sbjct: 333 TLTGSQQAIQRAKELILGIVES 354
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 28/41 (68%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP 88
++ +PK VG+VIGKGG+ I++LQ +G ++ + + +P
Sbjct: 386 KMFIPKEYVGMVIGKGGETIRELQTLSGCKINILPLVAREP 426
>gi|7245684|pdb|1EC6|A Chain A, Crystal Structure Of Nova-2 Kh3 K-Homology Rna-Binding
Domain Bound To 20-Mer Rna Hairpin
gi|7245685|pdb|1EC6|B Chain B, Crystal Structure Of Nova-2 Kh3 K-Homology Rna-Binding
Domain Bound To 20-Mer Rna Hairpin
Length = 87
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
E++++ VP+ VG ++GKGG + + Q TGAR+Q + E P +RR ++GSP
Sbjct: 3 ELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAAT 62
Query: 103 QEARARIEE 111
Q A+ I +
Sbjct: 63 QAAQYLISQ 71
>gi|302658378|ref|XP_003020893.1| hypothetical protein TRV_04969 [Trichophyton verrucosum HKI 0517]
gi|291184763|gb|EFE40275.1| hypothetical protein TRV_04969 [Trichophyton verrucosum HKI 0517]
Length = 561
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 8/93 (8%)
Query: 27 REFNENGD------GRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQF 80
R + GD RG + + E I++ VG++IG+ G+ +++++NETGARVQF
Sbjct: 168 RHYRAGGDRSPPPRNRGPVSDENNETIEID--NKHVGLIIGRQGENLRRIENETGARVQF 225
Query: 81 VQMREDDPSDRRCMLSGSPDQVQEARARIEELI 113
+ E + + R C LSG +A+A I+ ++
Sbjct: 226 LDSAEHNKTIRLCRLSGPKSIRDKAKAEIDRIV 258
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E ++ VP VG+VIG+ G+ ++ L +G R+ + E R L+GS +Q
Sbjct: 284 ETTKIMVPDRTVGLVIGRSGETVRDLAERSGCRINIARDGESINGLRPVTLTGSQQAIQR 343
Query: 105 ARARIEELIDS 115
A+ I +++S
Sbjct: 344 AKELILGIVES 354
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 28/41 (68%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP 88
++ +PK VG+VIGKGG+ I++LQ +G ++ + + +P
Sbjct: 386 KMFIPKEYVGMVIGKGGEAIRELQTLSGCKINILPLVAREP 426
>gi|70569718|dbj|BAE06463.1| Ci-FUSE [Ciona intestinalis]
Length = 200
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
+P VG++IG+GG+ I ++Q ETG R+Q Q +R C LSG+ +Q++ R +
Sbjct: 46 LPDDLVGLIIGRGGENIMRMQRETGCRIQITQ-SIPGTKERPCTLSGTQEQIEVCRNMLN 104
Query: 111 ELIDSVMVEQFSGANFD 127
E+I G+NF+
Sbjct: 105 EIISRSQAGTL-GSNFN 120
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD 87
I++ VP G++IGKGG+ IK LQ G ++ +Q D+
Sbjct: 138 IEIAVPPDKCGLIIGKGGETIKMLQQSLGVKMLLIQDSTDN 178
>gi|329663502|ref|NP_001193038.1| RNA-binding protein Nova-2 [Bos taurus]
Length = 492
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGS 98
E E++++ VP+ VG ++GKGG + + Q TGAR+Q + E P +RR ++GS
Sbjct: 403 ESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 462
Query: 99 PDQVQEARARIEELI 113
P Q A+ I + +
Sbjct: 463 PAATQAAQYLISQRV 477
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 94
Query: 105 ARARIEELIDSV 116
+ I E + +
Sbjct: 95 VHSFIAEKVREI 106
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEAR 106
++ VP + G++IGKGG +K + ++GA VQ Q E + +R +SG P+QV +A
Sbjct: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAV 193
Query: 107 ARI 109
+ I
Sbjct: 194 SAI 196
>gi|5902724|ref|NP_002507.1| RNA-binding protein Nova-2 [Homo sapiens]
gi|33516944|sp|Q9UNW9.1|NOVA2_HUMAN RecName: Full=RNA-binding protein Nova-2; AltName: Full=Astrocytic
NOVA1-like RNA-binding protein; AltName:
Full=Neuro-oncological ventral antigen 2
gi|3851553|gb|AAC72355.1| RNA-binding protein Nova-2 [Homo sapiens]
gi|195934809|gb|AAI68367.1| Neuro-oncological ventral antigen 2 [synthetic construct]
Length = 492
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGS 98
E E++++ VP+ VG ++GKGG + + Q TGAR+Q + E P +RR ++GS
Sbjct: 403 ESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 462
Query: 99 PDQVQEARARIEELI 113
P Q A+ I + +
Sbjct: 463 PAATQAAQYLISQRV 477
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 94
Query: 105 ARARIEELIDSV 116
+ I E + +
Sbjct: 95 VHSFIAEKVREI 106
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEAR 106
++ VP + G++IGKGG +K + ++GA VQ Q E + +R +SG P+QV +A
Sbjct: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAV 193
Query: 107 ARI 109
+ I
Sbjct: 194 SAI 196
>gi|453088436|gb|EMF16476.1| eukaryotic type KH-domain (KH-domain type I) [Mycosphaerella
populorum SO2202]
Length = 559
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 43/59 (72%)
Query: 56 VGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
VG++IG+ G+ ++K++ E+GARVQFVQ ++ ++R+C ++GS + A+ I ++I+
Sbjct: 186 VGLIIGRNGENLRKVEAESGARVQFVQAKDSHVAERQCTITGSQRSREAAKNAIFQIIE 244
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
Q+ VP VG++IG+GG+ IK LQ ++G V V + R L GS AR
Sbjct: 281 QLMVPDKTVGLIIGRGGETIKDLQEKSGCHVNIVGENKSVNGFRPINLIGSERATATARE 340
Query: 108 RIEELIDSVMVEQFSGANFDK 128
I ++++S SG + D+
Sbjct: 341 LILDIVESDSRNASSGPSRDR 361
Score = 38.5 bits (88), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ VP AVG++IGKGG+ IK +Q +G ++ Q + D +R L+G ++ A
Sbjct: 388 IRVPSEAVGMIIGKGGETIKDMQRTSGCKINVNQPQPPD-VERSIDLAGDARSMEAAERI 446
Query: 109 IEELIDSV 116
I E +++V
Sbjct: 447 IWEKVETV 454
>gi|26338834|dbj|BAC33088.1| unnamed protein product [Mus musculus]
Length = 244
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
+V+++ VP+ VG ++GKGG + + Q TGAR+Q + E P +R+ ++G+P
Sbjct: 159 DVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAAT 218
Query: 103 QEARARIEELID 114
Q A+ I + I
Sbjct: 219 QAAQYLITQRIT 230
>gi|348557851|ref|XP_003464732.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein Nova-2-like
[Cavia porcellus]
Length = 368
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGS 98
E E++++ VP+ VG ++GKGG + + Q TGAR+Q + E P +RR ++GS
Sbjct: 279 ESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 338
Query: 99 PDQVQEARARIEELID 114
P Q A+ I + +
Sbjct: 339 PAATQAAQYLISQRVT 354
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 109 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 168
Query: 105 ARARIEELIDSV 116
+ I E + +
Sbjct: 169 VHSFIAEKVREI 180
>gi|332856422|ref|XP_524310.3| PREDICTED: RNA-binding protein Nova-2 [Pan troglodytes]
Length = 607
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGS 98
E E++++ VP+ VG ++GKGG + + Q TGAR+Q + E P +RR ++GS
Sbjct: 518 ESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 577
Query: 99 PDQVQEARARIEELI 113
P Q A+ I + +
Sbjct: 578 PAATQAAQYLISQRV 592
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 150 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 209
Query: 105 ARARIEELIDSV 116
+ I E + +
Sbjct: 210 VHSFIAEKVREI 221
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEAR 106
++ VP + G++IGKGG +K + ++GA VQ Q E + +R +SG P+QV +A
Sbjct: 249 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAV 308
Query: 107 ARI 109
+ I
Sbjct: 309 SAI 311
>gi|119583082|gb|EAW62678.1| heterogeneous nuclear ribonucleoprotein K, isoform CRA_d [Homo
sapiens]
gi|119583085|gb|EAW62681.1| heterogeneous nuclear ribonucleoprotein K, isoform CRA_d [Homo
sapiens]
Length = 463
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 8/94 (8%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 376 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 434
Query: 93 CMLSGSPDQVQEARARIEELIDSVMVEQFSGANF 126
++G+ DQ+Q A+ ++ V+Q+SG F
Sbjct: 435 ITITGTQDQIQNAQYLLQN-----SVKQYSGKFF 463
>gi|397493518|ref|XP_003817651.1| PREDICTED: RNA-binding protein Nova-2 [Pan paniscus]
Length = 349
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGS 98
E E++++ VP+ VG ++GKGG + + Q TGAR+Q + E P +RR ++GS
Sbjct: 260 ESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 319
Query: 99 PDQVQEARARIEE 111
P Q A+ I +
Sbjct: 320 PAATQAAQYLISQ 332
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 8 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 67
Query: 105 ARARIEE 111
+ I E
Sbjct: 68 VHSFIAE 74
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEAR 106
++ VP + G++IGKGG +K + ++GA VQ Q E + +R +SG P+QV +A
Sbjct: 107 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAV 166
Query: 107 ARI 109
+ I
Sbjct: 167 SAI 169
>gi|320586065|gb|EFW98744.1| far upstream element-binding protein [Grosmannia clavigera kw1407]
Length = 572
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 43/68 (63%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ VP AVG++IGKGG+ I+++Q +TG ++ Q + ++R L GS ++ A+
Sbjct: 461 IFVPSEAVGMIIGKGGETIREMQTQTGCKINVSQTPGANENEREIGLIGSLQAIEMAKLA 520
Query: 109 IEELIDSV 116
IEE +++V
Sbjct: 521 IEEKVEAV 528
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
+P + VG++IG+ G+ +K+++N++ RVQF+ D R+C ++G Q AR I
Sbjct: 219 IPASLVGLIIGRQGENLKRVENDSHCRVQFLAAASPDEETRQCKITGPGAQRVIARTAIY 278
Query: 111 ELI-DSVMVEQFSGANFDKLRSTV 133
++I DS M G D+ S+V
Sbjct: 279 QIIEDSGMSSAPRGTGSDRGASSV 302
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 38/71 (53%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E +Q+ VP VG++IG+GG+ I+ LQ +G + V + R L G+ +
Sbjct: 328 ECVQIMVPDRTVGLIIGRGGETIRDLQERSGCHINIVGEAKSVNGLRPVNLIGARAMTNQ 387
Query: 105 ARARIEELIDS 115
A+ I E++DS
Sbjct: 388 AKELIMEIVDS 398
>gi|313228886|emb|CBY18038.1| unnamed protein product [Oikopleura dioica]
Length = 626
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
+P VG+VIG+GG+ I+++Q ET +Q VQ + +R C L+G+P+Q+Q A+ ++
Sbjct: 55 IPDQLVGLVIGRGGENIQRIQAETNCGIQ-VQAQSTGSENRPCTLTGTPEQLQAAKNALQ 113
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 5/75 (6%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP+ AVGV+IGK G+ I LQ ET R+QF + E D + R C ++GS E R +
Sbjct: 234 VPQGAVGVIIGKKGETITHLQGETVTRIQF-KPEEPDAATRGCYITGS----MEGVLRAQ 288
Query: 111 ELIDSVMVEQFSGAN 125
+++ S+ ++ +G +
Sbjct: 289 QIVMSICRKKMTGVD 303
Score = 40.0 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSD----RRCMLSGSPDQVQEAR 106
VP G VIGKGG+ I ++N++G Q Q + + PS+ R + G P+ VQ A+
Sbjct: 368 VPAQKAGAVIGKGGEHIIAIKNQSGC--QITQNKTNPPSNDTAWRYFTIKGQPEGVQLAQ 425
Query: 107 ARIEELI 113
I+E +
Sbjct: 426 KLIQEKV 432
>gi|116205595|ref|XP_001228608.1| hypothetical protein CHGG_10681 [Chaetomium globosum CBS 148.51]
gi|88176809|gb|EAQ84277.1| hypothetical protein CHGG_10681 [Chaetomium globosum CBS 148.51]
Length = 488
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 41/67 (61%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ VP AVG++IGKGG+ I+++QN TG ++ Q +R L GS D + +A+
Sbjct: 330 IYVPSDAVGMIIGKGGETIREMQNMTGCKINVSQSSGPGEVEREIGLVGSRDAIAQAKRA 389
Query: 109 IEELIDS 115
IE+ +D+
Sbjct: 390 IEDKVDA 396
>gi|334333295|ref|XP_003341704.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Monodelphis domestica]
Length = 470
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 8/94 (8%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 383 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 441
Query: 93 CMLSGSPDQVQEARARIEELIDSVMVEQFSGANF 126
++G+ DQ+Q A+ ++ V+Q+SG F
Sbjct: 442 ITITGTQDQIQNAQYLLQN-----SVKQYSGKFF 470
>gi|22328551|ref|NP_192745.2| KH domain-containing protein [Arabidopsis thaliana]
gi|332657435|gb|AEE82835.1| KH domain-containing protein [Arabidopsis thaliana]
Length = 725
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 37/106 (34%), Positives = 58/106 (54%), Gaps = 9/106 (8%)
Query: 25 NMREFNENGDGRGGMWEV---TWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFV 81
N +E N+ DG EV ++ VP + VGV+IGKGG+ I+ LQ +GA++Q +
Sbjct: 153 NGKEENKEVDGEKSQKEVDGTQSTTRRIDVPSSKVGVLIGKGGETIRYLQFNSGAKIQIL 212
Query: 82 QMREDDPSD--RRCMLSGSPDQVQEARARIEELIDSVMVEQFSGAN 125
+ E DPS R + GS ++ A E+LI +V+ E +G +
Sbjct: 213 RDSEADPSSALRPVEIIGSVACIESA----EKLISAVIAEAEAGGS 254
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFV-QMREDDP-SDRRCMLSGSPDQV 102
E I++ VP VG++IG+GG+ IK +Q +GAR Q + Q E D +R +SG Q+
Sbjct: 272 EQIEIKVPNDKVGLIIGRGGETIKNMQTRSGARTQLIPQHAEGDGLKERTVRISGDKMQI 331
Query: 103 QEARARIEELID 114
A I+++++
Sbjct: 332 DIATDMIKDVMN 343
>gi|301786262|ref|XP_002928556.1| PREDICTED: RNA-binding protein Nova-2-like [Ailuropoda melanoleuca]
Length = 329
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 10/102 (9%)
Query: 20 NDNFGNMREFNENGDGRGGMW--------EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQ 71
N ++ N+ N + G + E E++++ VP+ VG ++GKGG + + Q
Sbjct: 211 NISYANVAGPVANSNPTGSPYASPADLAAESAKELVEIAVPENLVGAILGKGGKTLVEYQ 270
Query: 72 NETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEARARIEE 111
TGAR+Q + E P +RR ++GSP Q A+ I +
Sbjct: 271 ELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQYLISQ 312
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 94
Query: 105 ARARIEELI 113
+ I E +
Sbjct: 95 VHSFIAEKV 103
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEAR 106
++ VP + G++IGKGG +K + ++GA VQ Q E + +R +SG P+QV +A
Sbjct: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAV 193
Query: 107 ARI 109
+ I
Sbjct: 194 SAI 196
>gi|255569106|ref|XP_002525522.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223535201|gb|EEF36880.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 798
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 50/82 (60%), Gaps = 4/82 (4%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMR--EDDPSDRRCM-LSGSPDQVQ 103
I++ VP VG++IG+GGD IK LQ ++GAR+Q + E D S R + ++G Q++
Sbjct: 298 IEMQVPNEKVGLIIGRGGDTIKALQAKSGARIQLIPQHPPEGDASKERTVRVTGDRKQIE 357
Query: 104 EARARIEELID-SVMVEQFSGA 124
AR I++++ +V + SG
Sbjct: 358 IAREMIKDVMSQNVRLSPLSGG 379
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQEARAR 108
VP VGV+IGKGGD I+ LQ +GA++Q + + DP + R L G+ + +A
Sbjct: 206 VPNDKVGVLIGKGGDTIRYLQYNSGAKIQITRDMDADPHSTTRPVELIGTLSSISKA--- 262
Query: 109 IEELIDSVMVEQFSGAN 125
E+LI++V+ E +G +
Sbjct: 263 -EKLINAVIAEADAGGS 278
>gi|302498875|ref|XP_003011434.1| hypothetical protein ARB_02284 [Arthroderma benhamiae CBS 112371]
gi|291174985|gb|EFE30794.1| hypothetical protein ARB_02284 [Arthroderma benhamiae CBS 112371]
Length = 561
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 40/58 (68%)
Query: 56 VGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELI 113
VG++IG+ G+ +++++NETGARVQF+ E + + R C LSG +A+A I+ ++
Sbjct: 201 VGLIIGRQGENLRRIENETGARVQFLDSAEHNKTIRLCRLSGPKSIRDKAKAEIDRIV 258
Score = 38.9 bits (89), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E ++ VP VG+VIG+ G+ ++ L +G R+ + E R L+GS +Q
Sbjct: 284 ETTKIMVPDRTVGLVIGRSGETVRDLAERSGCRINIARDGESINGLRPVTLTGSQQAIQR 343
Query: 105 ARARIEELIDS 115
A+ I +++S
Sbjct: 344 AKELILGIVES 354
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 28/41 (68%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP 88
++ +PK VG+VIGKGG+ I++LQ +G ++ + + +P
Sbjct: 386 KMFIPKEYVGMVIGKGGETIRELQTLSGCKINILPLVAREP 426
>gi|119583080|gb|EAW62676.1| heterogeneous nuclear ribonucleoprotein K, isoform CRA_b [Homo
sapiens]
Length = 462
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 8/94 (8%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 375 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 433
Query: 93 CMLSGSPDQVQEARARIEELIDSVMVEQFSGANF 126
++G+ DQ+Q A+ ++ V+Q+SG F
Sbjct: 434 ITITGTQDQIQNAQYLLQN-----SVKQYSGKFF 462
>gi|440907529|gb|ELR57670.1| RNA-binding protein Nova-2, partial [Bos grunniens mutus]
Length = 298
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGS 98
E E++++ VP+ VG ++GKGG + + Q TGAR+Q + E P +RR ++GS
Sbjct: 209 ESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 268
Query: 99 PDQVQEARARIEE 111
P Q A+ I +
Sbjct: 269 PAATQAAQYLISQ 281
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 7 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 66
Query: 105 ARARIEELI 113
+ I E +
Sbjct: 67 VHSFIAEKV 75
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEAR 106
++ VP + G++IGKGG +K + ++GA VQ Q E + +R +SG P+QV +A
Sbjct: 106 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAV 165
Query: 107 ARI 109
+ I
Sbjct: 166 SAI 168
>gi|345785612|ref|XP_855043.2| PREDICTED: RNA-binding protein Nova-2 [Canis lupus familiaris]
Length = 597
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGS 98
E E++++ VP+ VG ++GKGG + + Q TGAR+Q + E P +RR ++GS
Sbjct: 508 ESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 567
Query: 99 PDQVQEARARIEELI 113
P Q A+ I + +
Sbjct: 568 PAATQAAQYLISQRV 582
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 140 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 199
Query: 105 ARARIEELIDSV 116
+ I E + +
Sbjct: 200 VHSFIAEKVREI 211
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEAR 106
++ VP + G++IGKGG +K + ++GA VQ Q E + +R +SG P+QV +A
Sbjct: 239 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAV 298
Query: 107 ARI 109
+ I
Sbjct: 299 SAI 301
>gi|307110867|gb|EFN59102.1| hypothetical protein CHLNCDRAFT_137888 [Chlorella variabilis]
Length = 493
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 4/62 (6%)
Query: 52 PKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEE 111
PK+ VG VIGKGG+ IK LQ TGA +Q Q DP+ R ++GSP +Q A + + +
Sbjct: 69 PKSMVGRVIGKGGETIKSLQQYTGAMIQIDQ--STDPT--RVTIAGSPQSLQLAVSMVND 124
Query: 112 LI 113
++
Sbjct: 125 IV 126
>gi|403375811|gb|EJY87877.1| KH domain containing protein [Oxytricha trifallax]
Length = 990
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 43 TWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQV 102
T + + + VP VG++IGKGG+ I+ LQ ++G+++Q + + + R + G+ ++
Sbjct: 452 TPQALIIPVPNECVGLIIGKGGETIRYLQMKSGSKIQVAKKEIPNSTMRYVFIEGNQEKF 511
Query: 103 QEARARIEELIDS--VMVEQFS 122
A+ IE ++D +M EQFS
Sbjct: 512 DGAKKLIENIVDEHRIMQEQFS 533
Score = 35.0 bits (79), Expect = 8.8, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
+P + ++IG+ G IK L +TG + F+ + ++R LSGS D V + + +
Sbjct: 550 IPDTLIDIIIGQHGQTIKLLHQKTGCYI-FIPDEVTEKNERILQLSGSIDSVDKCKIELS 608
Query: 111 ELIDSV 116
+++++V
Sbjct: 609 QILENV 614
>gi|410925642|ref|XP_003976289.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 1
[Takifugu rubripes]
Length = 430
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 58/118 (49%), Gaps = 10/118 (8%)
Query: 11 RWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIK 68
R+ G DN + F RG ++ VI QV +PK G +IGKGG IK
Sbjct: 321 RYDSMSGSRYDNNSSWERFQSGS--RGSYSDIGGPVITTQVTIPKDLAGSIIGKGGQRIK 378
Query: 69 KLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELIDSVMVEQFSGANF 126
++++E GA ++ + E DR ++G+ DQ+Q A+ ++ V Q+SG F
Sbjct: 379 QIRHECGASIKIDEPLEGS-EDRIITITGTQDQIQNAQYLLQN-----SVRQYSGRFF 430
>gi|291358560|gb|ADD96765.1| heterogeneous nuclear ribonuclear protein K [Capra hircus]
Length = 441
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 8/94 (8%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 354 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 412
Query: 93 CMLSGSPDQVQEARARIEELIDSVMVEQFSGANF 126
++G+ DQ+Q A+ ++ V+Q+SG F
Sbjct: 413 ITITGTQDQIQNAQYLLQN-----SVKQYSGKFF 441
>gi|326480928|gb|EGE04938.1| KH domain-containing protein [Trichophyton equinum CBS 127.97]
Length = 563
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 40/58 (68%)
Query: 56 VGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELI 113
VG++IG+ G+ +++++NETGARVQF+ E + + R C LSG +A+A I+ ++
Sbjct: 201 VGLIIGRQGENLRRIENETGARVQFLDSAEHNKTIRLCRLSGPKSIRDKAKAEIDRIV 258
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 34 DGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRC 93
DGR G + + E ++ VP VG+VIG+ G+ ++ L +G R+ + E R
Sbjct: 274 DGRPGDADGS-ETTKIMVPDRTVGLVIGRSGETVRDLAERSGCRINIARDGESINGLRPV 332
Query: 94 MLSGSPDQVQEARARIEELIDS 115
L+GS +Q A+ I +++S
Sbjct: 333 TLTGSQQAIQRAKELILGIVES 354
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 28/41 (68%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP 88
++ +PK VG+VIGKGG+ I++LQ +G ++ + + +P
Sbjct: 386 KMFIPKEYVGMVIGKGGETIRELQTLSGCKINILPLVAREP 426
>gi|74144445|dbj|BAE36070.1| unnamed protein product [Mus musculus]
Length = 463
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 8/94 (8%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 376 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 434
Query: 93 CMLSGSPDQVQEARARIEELIDSVMVEQFSGANF 126
++G+ DQ+Q A+ ++ V+Q+SG F
Sbjct: 435 ITITGTQDQIQNAQYLLQN-----SVKQYSGKFF 463
>gi|113677906|ref|NP_001038254.1| neuro-oncological ventral antigen 1 [Danio rerio]
gi|213624727|gb|AAI71499.1| Neuro-oncological ventral antigen 1 [Danio rerio]
gi|213627516|gb|AAI71495.1| Neuro-oncological ventral antigen 1 [Danio rerio]
Length = 495
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
EV+++ VP+ VG ++GKGG + + Q TGAR+Q + E P +R+ ++GSP
Sbjct: 410 EVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAAT 469
Query: 103 QEARARIEELI 113
Q A+ I + I
Sbjct: 470 QAAQYLISQRI 480
Score = 43.9 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 59 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNG 118
Query: 105 ARARIEELI 113
I E +
Sbjct: 119 VHNFIAEKV 127
Score = 41.2 bits (95), Expect = 0.12, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
++ VP + G++IGKGG +K + ++GA VQ Q E + +R +SG P+Q ++A
Sbjct: 158 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQNRKA 216
>gi|13384620|ref|NP_079555.1| heterogeneous nuclear ribonucleoprotein K [Mus musculus]
gi|14165435|ref|NP_112552.1| heterogeneous nuclear ribonucleoprotein K isoform b [Homo sapiens]
gi|16923998|ref|NP_476482.1| heterogeneous nuclear ribonucleoprotein K [Rattus norvegicus]
gi|114625188|ref|XP_001155028.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 17
[Pan troglodytes]
gi|114625190|ref|XP_001155252.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 21
[Pan troglodytes]
gi|126334813|ref|XP_001368466.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 2
[Monodelphis domestica]
gi|296189583|ref|XP_002742833.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 6
[Callithrix jacchus]
gi|332236649|ref|XP_003267512.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 2
[Nomascus leucogenys]
gi|332236653|ref|XP_003267514.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 4
[Nomascus leucogenys]
gi|338719650|ref|XP_003364038.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K [Equus
caballus]
gi|397475601|ref|XP_003809222.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 2 [Pan
paniscus]
gi|397475605|ref|XP_003809224.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 4 [Pan
paniscus]
gi|402897757|ref|XP_003911911.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 3
[Papio anubis]
gi|402897759|ref|XP_003911912.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 4
[Papio anubis]
gi|403300940|ref|XP_003941170.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 2
[Saimiri boliviensis boliviensis]
gi|410978215|ref|XP_003995491.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 3
[Felis catus]
gi|410978217|ref|XP_003995492.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 4
[Felis catus]
gi|426362133|ref|XP_004048235.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 3
[Gorilla gorilla gorilla]
gi|426362135|ref|XP_004048236.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 4
[Gorilla gorilla gorilla]
gi|48429097|sp|P61980.1|HNRPK_RAT RecName: Full=Heterogeneous nuclear ribonucleoprotein K;
Short=hnRNP K; AltName: Full=dC stretch-binding protein;
Short=CSBP
gi|48429103|sp|P61978.1|HNRPK_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein K;
Short=hnRNP K; AltName: Full=Transformation up-regulated
nuclear protein; Short=TUNP
gi|48429104|sp|P61979.1|HNRPK_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein K;
Short=hnRNP K
gi|241478|gb|AAB20770.1| heterogeneous nuclear ribonucleoprotein complex K [Homo sapiens]
gi|409389|dbj|BAA04566.1| dC-stretch binding protein [Rattus norvegicus]
gi|12847547|dbj|BAB27614.1| unnamed protein product [Mus musculus]
gi|15929044|gb|AAH14980.1| Heterogeneous nuclear ribonucleoprotein K [Homo sapiens]
gi|119583079|gb|EAW62675.1| heterogeneous nuclear ribonucleoprotein K, isoform CRA_a [Homo
sapiens]
gi|148709316|gb|EDL41262.1| mCG6893, isoform CRA_a [Mus musculus]
gi|149039793|gb|EDL93909.1| heterogeneous nuclear ribonucleoprotein K, isoform CRA_a [Rattus
norvegicus]
gi|380812324|gb|AFE78036.1| heterogeneous nuclear ribonucleoprotein K isoform b [Macaca
mulatta]
gi|410337441|gb|JAA37667.1| heterogeneous nuclear ribonucleoprotein K [Pan troglodytes]
gi|417401355|gb|JAA47567.1| Putative polyc-binding hnrnp-k protein hrb57a/hnrnp [Desmodus
rotundus]
Length = 463
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 8/94 (8%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 376 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 434
Query: 93 CMLSGSPDQVQEARARIEELIDSVMVEQFSGANF 126
++G+ DQ+Q A+ ++ V+Q+SG F
Sbjct: 435 ITITGTQDQIQNAQYLLQN-----SVKQYSGKFF 463
>gi|354500000|ref|XP_003512091.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 2
[Cricetulus griseus]
Length = 463
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 8/94 (8%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 376 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 434
Query: 93 CMLSGSPDQVQEARARIEELIDSVMVEQFSGANF 126
++G+ DQ+Q A+ ++ V+Q+SG F
Sbjct: 435 ITITGTQDQIQNAQYLLQN-----SVKQYSGKFF 463
>gi|347828793|emb|CCD44490.1| hypothetical protein [Botryotinia fuckeliana]
Length = 550
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ VP AVG++IGKGG+ IK +QN TG ++ Q +R L GS + A+
Sbjct: 401 IFVPSEAVGMIIGKGGETIKDMQNTTGCKINVTQSSGPGEVEREIGLVGSQQAIAAAKRA 460
Query: 109 IEELIDSV 116
IE+ +D+V
Sbjct: 461 IEDKVDAV 468
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 39/59 (66%)
Query: 56 VGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
VG++IG+ G+ ++++++ETG RVQF+ ++ R C ++G + +A+A I +ID
Sbjct: 197 VGLIIGRQGENLRRVESETGCRVQFITGPDETGPFRTCKITGPRARRADAKAEITRIID 255
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
+ +Q+ VP VG++IG+GG+ I+ LQ +G V V ++ R L G+ +
Sbjct: 287 DSMQIMVPDRTVGLIIGRGGETIRDLQERSGCHVNIVGEQKSVNGLRPVNLIGTREAAAM 346
Query: 105 ARARIEELIDS 115
A+ I E+++S
Sbjct: 347 AKDLIMEIVES 357
>gi|326473929|gb|EGD97938.1| hypothetical protein TESG_05238 [Trichophyton tonsurans CBS 112818]
Length = 545
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 40/58 (68%)
Query: 56 VGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELI 113
VG++IG+ G+ +++++NETGARVQF+ E + + R C LSG +A+A I+ ++
Sbjct: 201 VGLIIGRQGENLRRIENETGARVQFLDSAEHNKTIRLCRLSGPKSIRDKAKAEIDRIV 258
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 34 DGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRC 93
DGR G + + E ++ VP VG+VIG+ G+ ++ L +G R+ + E R
Sbjct: 274 DGRPGDADGS-ETTKIMVPDRTVGLVIGRSGETVRDLAERSGCRINIARDGESINGLRPV 332
Query: 94 MLSGSPDQVQEARARIEELIDS 115
L+GS +Q A+ I +++S
Sbjct: 333 TLTGSQQAIQRAKELILGIVES 354
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 28/41 (68%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP 88
++ +PK VG+VIGKGG+ I++LQ +G ++ + + +P
Sbjct: 386 KMFIPKEYVGMVIGKGGETIRELQTLSGCKINILPLVAREP 426
>gi|403347723|gb|EJY73295.1| KH domain containing protein [Oxytricha trifallax]
Length = 991
Score = 49.7 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 43 TWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQV 102
T + + + VP VG++IGKGG+ I+ LQ ++G+++Q + + + R + G+ ++
Sbjct: 453 TPQALIIPVPNECVGLIIGKGGETIRYLQMKSGSKIQVAKKEIPNSTMRYVFIEGNQEKF 512
Query: 103 QEARARIEELIDS--VMVEQFS 122
A+ IE ++D +M EQFS
Sbjct: 513 DGAKKLIENIVDEHRIMQEQFS 534
Score = 35.0 bits (79), Expect = 9.3, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
+P + ++IG+ G IK L +TG + F+ + ++R LSGS D V + + +
Sbjct: 551 IPDTLIDIIIGQHGQTIKLLHQKTGCYI-FIPDEVTEKNERILQLSGSIDSVDKCKIELS 609
Query: 111 ELIDSV 116
+++++V
Sbjct: 610 QILENV 615
>gi|395526246|ref|XP_003765279.1| PREDICTED: RNA-binding protein Nova-2 [Sarcophilus harrisii]
Length = 233
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGS 98
E E++++ VP+ VG ++GKGG + + Q TGAR+Q + E P +RR ++GS
Sbjct: 144 ESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 203
Query: 99 PDQVQEARARIEE 111
P Q A+ I +
Sbjct: 204 PAATQAAQYLISQ 216
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 37 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 96
Query: 105 ARARIEELIDSV 116
+ I E + +
Sbjct: 97 VHSFIAEKVREI 108
>gi|383863655|ref|XP_003707295.1| PREDICTED: RNA-binding protein Nova-2-like isoform 2 [Megachile
rotundata]
Length = 535
Score = 49.7 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQV 102
++V VP A G +IGKGGD I +LQ +TGA+V+ + + P ++R C+++GS + +
Sbjct: 68 LKVLVPGVAAGAIIGKGGDTIAQLQKDTGAKVKISKSHDFYPGTTERVCLITGSLEAI 125
Score = 43.1 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 31/48 (64%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM 94
+++ VP + G++IGK G+ IK+++ E+G+ VQ Q +D RC+
Sbjct: 163 VKILVPNSTAGMIIGKAGNYIKQIKEESGSYVQISQKAKDVSLQERCI 210
>gi|345480415|ref|XP_003424144.1| PREDICTED: tudor and KH domain-containing protein-like [Nasonia
vitripennis]
Length = 376
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 44/68 (64%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
++V VP+ V V+IG+GG +I+ +Q T +++F + + D +R C++ GS + ++ A
Sbjct: 50 VEVVVPRQFVPVIIGRGGTVIQSIQESTNTKIRFREESDVDLLERICIIIGSLENIKLAE 109
Query: 107 ARIEELID 114
RI+ ++D
Sbjct: 110 ERIKVILD 117
>gi|383863653|ref|XP_003707294.1| PREDICTED: RNA-binding protein Nova-2-like isoform 1 [Megachile
rotundata]
Length = 514
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQV 102
++V VP A G +IGKGGD I +LQ +TGA+V+ + + P ++R C+++GS + +
Sbjct: 47 LKVLVPGVAAGAIIGKGGDTIAQLQKDTGAKVKISKSHDFYPGTTERVCLITGSLEAI 104
Score = 43.1 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 31/48 (64%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM 94
+++ VP + G++IGK G+ IK+++ E+G+ VQ Q +D RC+
Sbjct: 142 VKILVPNSTAGMIIGKAGNYIKQIKEESGSYVQISQKAKDVSLQERCI 189
>gi|7245740|pdb|1DTJ|A Chain A, Crystal Structure Of Nova-2 Kh3 K-Homology Rna-Binding
Domain
gi|7245741|pdb|1DTJ|B Chain B, Crystal Structure Of Nova-2 Kh3 K-Homology Rna-Binding
Domain
gi|7245742|pdb|1DTJ|C Chain C, Crystal Structure Of Nova-2 Kh3 K-Homology Rna-Binding
Domain
gi|7245743|pdb|1DTJ|D Chain D, Crystal Structure Of Nova-2 Kh3 K-Homology Rna-Binding
Domain
Length = 76
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
E++++ VP+ VG ++GKGG + + Q TGAR+Q + E P +RR ++GSP
Sbjct: 3 ELVEMAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAAT 62
Query: 103 QEARARIEE 111
Q A+ I +
Sbjct: 63 QAAQYLISQ 71
>gi|410925644|ref|XP_003976290.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 2
[Takifugu rubripes]
Length = 430
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 51/93 (54%), Gaps = 8/93 (8%)
Query: 36 RGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRC 93
RG ++ VI QV +PK G +IGKGG IK++++E GA ++ + E DR
Sbjct: 344 RGSYSDIGGPVITTQVTIPKDLAGSIIGKGGQRIKQIRHECGASIKIDEPLEGS-EDRII 402
Query: 94 MLSGSPDQVQEARARIEELIDSVMVEQFSGANF 126
++G+ DQ+Q A+ ++ V Q+SG F
Sbjct: 403 TITGTQDQIQNAQYLLQN-----SVRQYSGRFF 430
>gi|308486259|ref|XP_003105327.1| hypothetical protein CRE_21277 [Caenorhabditis remanei]
gi|308256835|gb|EFP00788.1| hypothetical protein CRE_21277 [Caenorhabditis remanei]
Length = 441
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
I++ +P +AVG +IGKGG+ ++ L+N+ RVQ + E P S+R C++ G + +
Sbjct: 45 IKILIPSSAVGAIIGKGGEAMRNLKNDNNCRVQMSKNSETYPGTSERICLVKGRLNNIMA 104
Query: 105 ARARIEELIDSVMVEQFSGANFDKLRST 132
I++ I +Q FD ++
Sbjct: 105 VIESIQDKIREKCADQAGNDAFDHKNTS 132
>gi|327263405|ref|XP_003216510.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Anolis
carolinensis]
Length = 425
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 8/94 (8%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 338 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 396
Query: 93 CMLSGSPDQVQEARARIEELIDSVMVEQFSGANF 126
++G+ DQ+Q A+ ++ V+Q+SG F
Sbjct: 397 ITITGTQDQIQNAQYLLQN-----SVKQYSGKFF 425
>gi|336265011|ref|XP_003347280.1| hypothetical protein SMAC_08717 [Sordaria macrospora k-hell]
gi|380087770|emb|CCC05225.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 583
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ VP AVG++IGKGG+ I+++QN TG ++ Q ++R L G+ + + A+
Sbjct: 424 IFVPSEAVGMIIGKGGETIREMQNTTGCKINVSQSSGAGETEREIGLVGTREAINRAKRA 483
Query: 109 IEELIDSVMVEQFSGA 124
IE+ +D+ + GA
Sbjct: 484 IEDKVDAAKQKSSGGA 499
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 35 GRGGMWEVTW-----EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS 89
GRGG + +Q+ VP VG++IG+GG+ I+ LQ +G + V +
Sbjct: 302 GRGGSAAPPPLKEGEDSLQIMVPDRTVGLIIGRGGETIRDLQERSGCHINIVGENKSVNG 361
Query: 90 DRRCMLSGSPDQVQEARARIEELIDS 115
R L G+P + A+ I E++DS
Sbjct: 362 LRPVNLIGTPAAAKMAKELILEIVDS 387
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ + + VG++IG+ G+ +++++ E+ RVQFV R C ++G Q +EA+
Sbjct: 218 ITIESSLVGLIIGRQGENLRRVEGESRCRVQFVPPSSPTEQYRPCKITGPRAQREEAKEM 277
Query: 109 IEELI-DSVM 117
I +I DS M
Sbjct: 278 INRIIRDSGM 287
>gi|154310385|ref|XP_001554524.1| hypothetical protein BC1G_07112 [Botryotinia fuckeliana B05.10]
Length = 553
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ VP AVG++IGKGG+ IK +QN TG ++ Q +R L GS + A+
Sbjct: 401 IFVPSEAVGMIIGKGGETIKDMQNTTGCKINVTQSSGPGEVEREIGLVGSQQAIAAAKRA 460
Query: 109 IEELIDSV 116
IE+ +D+V
Sbjct: 461 IEDKVDAV 468
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 39/59 (66%)
Query: 56 VGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
VG++IG+ G+ ++++++ETG RVQF+ ++ R C ++G + +A+A I +ID
Sbjct: 197 VGLIIGRQGENLRRVESETGCRVQFITGPDETGPFRTCKITGPRARRADAKAEITRIID 255
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
+ +Q+ VP VG++IG+GG+ I+ LQ +G V V ++ R L G+ +
Sbjct: 287 DSMQIMVPDRTVGLIIGRGGETIRDLQERSGCHVNIVGEQKSVNGLRPVNLIGTREAAAM 346
Query: 105 ARARIEELIDS 115
A+ I E+++S
Sbjct: 347 AKDLIMEIVES 357
>gi|363744460|ref|XP_003643054.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 1
[Gallus gallus]
Length = 426
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 8/94 (8%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 339 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 397
Query: 93 CMLSGSPDQVQEARARIEELIDSVMVEQFSGANF 126
++G+ DQ+Q A+ ++ V+Q+SG F
Sbjct: 398 ITITGTQDQIQNAQYLLQN-----SVKQYSGKFF 426
>gi|71897277|ref|NP_001026556.1| heterogeneous nuclear ribonucleoprotein K [Gallus gallus]
gi|75571241|sp|Q5ZIQ3.1|HNRPK_CHICK RecName: Full=Heterogeneous nuclear ribonucleoprotein K;
Short=hnRNP K
gi|53135051|emb|CAG32390.1| hypothetical protein RCJMB04_24e23 [Gallus gallus]
Length = 427
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 8/94 (8%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 340 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 398
Query: 93 CMLSGSPDQVQEARARIEELIDSVMVEQFSGANF 126
++G+ DQ+Q A+ ++ V+Q+SG F
Sbjct: 399 ITITGTQDQIQNAQYLLQN-----SVKQYSGKFF 427
>gi|51092069|gb|AAT94448.1| RE39088p [Drosophila melanogaster]
Length = 563
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGS 98
E T+ +++ VP A G +IGKGG+ I LQ +TGARV+ + + P ++R C+++GS
Sbjct: 118 ETTYH-MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGS 176
Query: 99 PDQV 102
+ +
Sbjct: 177 TEAI 180
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM 94
+++ VP + G++IGKGG IK+++ E+G+ VQ Q D RC+
Sbjct: 216 VKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPTDVSLQERCI 263
>gi|444517457|gb|ELV11574.1| Heterogeneous nuclear ribonucleoprotein K [Tupaia chinensis]
Length = 392
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 59/105 (56%), Gaps = 9/105 (8%)
Query: 24 GNMREFNENGDGRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFV 81
G+ +++ G GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++
Sbjct: 295 GSEYDYSYAG-GRGSYCDLGGPIITTQVTIPKDFAGSIIGKGGQRIKQIRHESGASIKID 353
Query: 82 QMREDDPSDRRCMLSGSPDQVQEARARIEELIDSVMVEQFSGANF 126
+ E DR ++G+ QVQ A+ ++ V+Q+SG F
Sbjct: 354 EPLEGS-EDRIITITGTQGQVQNAQYLLQN-----SVKQYSGKFF 392
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+++ + ++ G +IG G IK+L T ++ Q R P++R ++ G PD+V E
Sbjct: 82 LRLLIHQSLAGGIIGVKGAKIKELGENTRTTIKLFQERCPHPTNRVVLIGGKPDRVVECI 141
Query: 107 ARIEELI 113
I +LI
Sbjct: 142 KIILDLI 148
>gi|340515764|gb|EGR46016.1| predicted protein [Trichoderma reesei QM6a]
Length = 559
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ VP AVG++IGKGG+ I+++QN TG ++ Q R L G+ D + A+
Sbjct: 400 IYVPSDAVGMIIGKGGETIREMQNSTGCKINVAQSSGPGEVQREIALIGTRDSIARAKQA 459
Query: 109 IEELIDSV 116
I+E +++V
Sbjct: 460 IDEKVEAV 467
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+Q+ VP VG++IG+GG+ I+ LQ +G + V + R L GS + A+
Sbjct: 292 MQIMVPDRTVGLIIGRGGETIRDLQERSGCHINIVGESKSVNGLRPVNLIGSREAAARAK 351
Query: 107 ARIEELIDS 115
I E++DS
Sbjct: 352 DFIMEIVDS 360
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 13/99 (13%)
Query: 27 REFNENGDG-------RGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQ 79
R F+ G G RGG + E IQ+ + VG++IG+ G+ +++++ +T RVQ
Sbjct: 171 RTFSPRGGGGRERSPLRGG--DDNAETIQIE--SSLVGLIIGRQGENLRRIEADTNCRVQ 226
Query: 80 FVQMREDDPSDRRCMLSGSPDQVQEARARIEELI-DSVM 117
F+ + P R+C ++G + E + I +I DS M
Sbjct: 227 FLAATDGGPF-RQCKITGPRARRAEVKTAINRIIEDSGM 264
>gi|431902890|gb|ELK09105.1| Heterogeneous nuclear ribonucleoprotein K [Pteropus alecto]
Length = 438
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 294 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 352
Query: 93 CMLSGSPDQVQEARARIEELI 113
++G+ DQ+Q A+ ++ I
Sbjct: 353 ITITGTQDQIQNAQYLLQNSI 373
>gi|431909188|gb|ELK12778.1| RNA-binding protein Nova-2 [Pteropus alecto]
Length = 334
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGS 98
E E++++ VP+ VG ++GKGG + + Q TGAR+Q + E P +RR ++GS
Sbjct: 245 ESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 304
Query: 99 PDQVQEARARIEE 111
P Q A+ I +
Sbjct: 305 PAATQAAQYLISQ 317
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 94
Query: 105 ARARIEELIDSV 116
+ I E + +
Sbjct: 95 VHSFIAEKVREI 106
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEAR 106
++ VP + G++IGKGG +K + ++GA VQ Q E + +R +SG P+QV +A
Sbjct: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAV 193
Query: 107 ARI 109
+ I
Sbjct: 194 SAI 196
>gi|390177062|ref|XP_003736268.1| GA30025, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388858892|gb|EIM52341.1| GA30025, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 714
Score = 49.3 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGS 98
E T+ +++ VP A G +IGKGG+ I LQ +TGARV+ + + P ++R C+++GS
Sbjct: 239 ETTYH-MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGS 297
Query: 99 PDQV 102
+ +
Sbjct: 298 TEAI 301
Score = 43.5 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 31/48 (64%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM 94
+++ VP + G++IGKGG IK+++ ++G+ VQ Q +D RC+
Sbjct: 337 VKILVPNSTAGMIIGKGGAFIKQIKEDSGSYVQISQKPKDVSLQERCI 384
>gi|344237565|gb|EGV93668.1| RNA-binding protein Nova-1 [Cricetulus griseus]
Length = 310
Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
+V+++ VP+ VG ++GKGG + + Q TGAR+Q + E P +R+ ++G+P
Sbjct: 225 DVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAAT 284
Query: 103 QEARARIEELI 113
Q A+ I + I
Sbjct: 285 QAAQYLITQRI 295
>gi|124808479|ref|XP_001348324.1| RNA-binding protein Nova-1, putative [Plasmodium falciparum 3D7]
gi|23497216|gb|AAN36763.1| RNA-binding protein Nova-1, putative [Plasmodium falciparum 3D7]
Length = 337
Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
++ VPK+AV +IGKGG IK+LQ+ TG+++Q + RED ++R + GS + +++
Sbjct: 113 RIVVPKSAVSAIIGKGGQQIKQLQDSTGSKIQ-ISSREDGLNERIITIIGSFESIRDTAL 171
Query: 108 RI 109
++
Sbjct: 172 KV 173
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
I + +P +G VIGK G + + N TGA+++ + E P ++R+ + GS V
Sbjct: 253 ISIQIPDEFIGAVIGKNGSRLTNIMNSTGAQIRISRKGELVPGTTNRKVRIIGSVAAVHA 312
Query: 105 ARARIEELIDSVMVE 119
A + + ++S ++
Sbjct: 313 AHVLLLQRLESAYMQ 327
>gi|383850186|ref|XP_003700678.1| PREDICTED: tudor and KH domain-containing protein-like [Megachile
rotundata]
Length = 608
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I+ VP+ V VIG+GG IK +QN+TG ++ F + + P DR C++ GS + Q A
Sbjct: 51 IECKVPRQHVPAVIGRGGSTIKDVQNKTGTQIHFKEDNIECP-DRVCLIKGSHEATQLAE 109
Query: 107 ARIEELIDS 115
I+ +I++
Sbjct: 110 RMIKSIIEN 118
Score = 43.9 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGAR--VQFVQMREDDPSDRRCMLSGSPDQV 102
E ++ VP A +IGKGG++I ++Q+ + A+ V+ Q D ++RR M+ G+ +Q+
Sbjct: 123 ETYEIYVPHNACRRIIGKGGEVIHQIQSTSSAKITVESGQGFYDTNAERRIMIKGTSEQI 182
Query: 103 QEARARIEELI 113
A A IEE +
Sbjct: 183 AVAVALIEEKV 193
>gi|9665104|gb|AAF97295.1|AC010164_17 Hypothetical protein [Arabidopsis thaliana]
Length = 389
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM-LSGSPDQVQ 103
E +++ VP VGV+IG+GG+ IK +Q ++ AR+Q + E D S R + +SG Q+
Sbjct: 298 EQMEIKVPSDKVGVIIGRGGETIKNMQTKSRARIQLIPQNEGDASKERTVRISGDKRQID 357
Query: 104 EARARIEELIDSVMVEQF 121
A A I++++ V + F
Sbjct: 358 IATALIKDVMYQVCLLMF 375
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 48/77 (62%), Gaps = 6/77 (7%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSD--RRCMLSGSPDQVQEAR 106
+ VP + VG +IGKGG+M++ LQ +GA++Q + E DPS R + G+ +++A
Sbjct: 214 IDVPSSKVGTLIGKGGEMVRYLQVNSGAKIQIRRDAEADPSSALRPVEIIGTVSCIEKA- 272
Query: 107 ARIEELIDSVMVEQFSG 123
E+LI++V+ E +G
Sbjct: 273 ---EKLINAVIAEVEAG 286
>gi|67968900|dbj|BAE00807.1| unnamed protein product [Macaca fascicularis]
Length = 342
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
+V+++ VP+ VG ++GKGG + + Q TGAR+Q + E P +R+ ++G+P
Sbjct: 257 DVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAAT 316
Query: 103 QEARARIEELID 114
Q A+ I + I
Sbjct: 317 QAAQYLITQRIT 328
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
+++ VP + G++IGKGG +K + ++GA VQ Q + + +R +SG P+Q ++A
Sbjct: 9 VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 68
Query: 106 RARIEELIDSVMVEQFSGA 124
+E +I + + SG+
Sbjct: 69 ---VELIIQKIQEDPQSGS 84
>gi|170586586|ref|XP_001898060.1| KH domain containing protein [Brugia malayi]
gi|158594455|gb|EDP33039.1| KH domain containing protein [Brugia malayi]
Length = 451
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Query: 20 NDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQ 79
+D +G MR+ M E V +P G +IGKGG I +++ E+GA+++
Sbjct: 346 DDRYGGMRDMMGRYSPIPAMQTTQVETTDVTIPDELGGAIIGKGGSRINRVREESGAQIE 405
Query: 80 FVQMREDDPSDRRCMLSGSPDQVQEARARIEELI 113
V+ D+ DR +SG+ +Q+Q A+ +++ +
Sbjct: 406 -VEPHRDNGGDRIITISGTREQIQAAQYLLQQCV 438
>gi|281348784|gb|EFB24368.1| hypothetical protein PANDA_018514 [Ailuropoda melanoleuca]
Length = 346
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGS 98
E E++++ VP+ VG ++GKGG + + Q TGAR+Q + E P +RR ++GS
Sbjct: 257 ESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 316
Query: 99 PDQVQEARARIEE 111
P Q A+ I +
Sbjct: 317 PAATQAAQYLISQ 329
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 94
Query: 105 ARARIEELI 113
+ I E +
Sbjct: 95 VHSFIAEKV 103
Score = 43.1 bits (100), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEAR 106
++ VP + G++IGKGG +K + ++GA VQ Q E + +R +SG P+QV +A
Sbjct: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAV 193
Query: 107 ARI 109
+ I
Sbjct: 194 SAI 196
>gi|443700302|gb|ELT99335.1| hypothetical protein CAPTEDRAFT_173082 [Capitella teleta]
Length = 552
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V VP A G +IGKGG+ I +Q ETGA V+ + + P S+R C+++G+ D V++
Sbjct: 48 LKVLVPSIAAGAIIGKGGETITDIQKETGATVKMSKNNDFYPGTSERVCLVNGTLDSVRK 107
Query: 105 ARARIEELI 113
I E I
Sbjct: 108 VIVFIMERI 116
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM-LSGSPDQVQEA 105
+++ VP + G+VIGKGG I+++++++GA VQ Q +D RC+ ++G +Q +EA
Sbjct: 141 MKILVPNSTAGMVIGKGGAFIRQIKDDSGAYVQVSQKSKDMSLPERCVTIAGDTEQNREA 200
Query: 106 RARIEELIDSVM 117
I+ +++ +M
Sbjct: 201 ---IDLVLEKIM 209
>gi|410982764|ref|XP_003997718.1| PREDICTED: RNA-binding protein Nova-2 [Felis catus]
Length = 372
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGS 98
++ E++++ VP+ VG ++GKGG + + Q TGAR+Q + E P +RR ++GS
Sbjct: 283 DLAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 342
Query: 99 PDQVQEARARIEE 111
P Q A+ I +
Sbjct: 343 PAATQAAQYLISQ 355
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 43 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 102
Query: 105 ARARIEELI 113
+ I E +
Sbjct: 103 VHSFIAEKV 111
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEAR 106
++ VP + G++IGKGG +K + ++GA VQ Q E + +R +SG P+QV +A
Sbjct: 142 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAV 201
Query: 107 ARI 109
+ I
Sbjct: 202 SAI 204
>gi|126362045|gb|AAI32211.1| Nova1 protein [Mus musculus]
gi|126522122|gb|AAI32355.1| Nova1 protein [Mus musculus]
Length = 330
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
+V+++ VP+ VG ++GKGG + + Q TGAR+Q + E P +R+ ++G+P
Sbjct: 245 DVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAAT 304
Query: 103 QEARARIEELID 114
Q A+ I + I
Sbjct: 305 QAAQYLITQRIT 316
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEARARI 109
VP + G++IGKGG +K + ++GA VQ Q + + +R +SG P+Q ++A +
Sbjct: 1 VPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA---V 57
Query: 110 EELIDSVMVEQFSGA 124
E +I + + SG+
Sbjct: 58 ELIIQKIQEDPQSGS 72
>gi|24645366|ref|NP_731354.1| pasilla, isoform B [Drosophila melanogaster]
gi|11526802|gb|AAG36787.1|AF220420_1 PASILLA splice variant 1 [Drosophila melanogaster]
gi|11526804|gb|AAG36788.1|AF220421_1 PASILLA splice variant 2 [Drosophila melanogaster]
gi|23170798|gb|AAN13427.1| pasilla, isoform B [Drosophila melanogaster]
Length = 475
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGS 98
E T+ +++ VP A G +IGKGG+ I LQ +TGARV+ + + P ++R C+++GS
Sbjct: 30 ETTYH-MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGS 88
Query: 99 PDQV 102
+ +
Sbjct: 89 TEAI 92
Score = 43.9 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM 94
+++ VP + G++IGKGG IK+++ E+G+ VQ Q D RC+
Sbjct: 128 VKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPTDVSLQERCI 175
>gi|161078118|ref|NP_001036691.1| pasilla, isoform I [Drosophila melanogaster]
gi|113194762|gb|ABI31151.1| pasilla, isoform I [Drosophila melanogaster]
Length = 519
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGS 98
E T+ +++ VP A G +IGKGG+ I LQ +TGARV+ + + P ++R C+++GS
Sbjct: 74 ETTYH-MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGS 132
Query: 99 PDQV 102
+ +
Sbjct: 133 TEAI 136
Score = 43.9 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM 94
+++ VP + G++IGKGG IK+++ E+G+ VQ Q D RC+
Sbjct: 172 VKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPTDVSLQERCI 219
>gi|336467937|gb|EGO56100.1| hypothetical protein NEUTE1DRAFT_83087 [Neurospora tetrasperma FGSC
2508]
gi|350289825|gb|EGZ71050.1| hypothetical protein NEUTE2DRAFT_151588 [Neurospora tetrasperma
FGSC 2509]
Length = 578
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ VP AVG++IGKGG+ I+++QN TG ++ Q ++R L G+ + + A+
Sbjct: 422 IFVPSEAVGMIIGKGGETIREMQNTTGCKINVSQSSGAGETEREIGLVGTREAINRAKRA 481
Query: 109 IEELIDSVMVEQFSGA 124
IE+ +D+ + GA
Sbjct: 482 IEDKVDAAKQKSSGGA 497
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 35 GRGGMWEVTW-----EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS 89
GRGG + +Q+ VP VG++IG+GG+ I+ LQ +G + V +
Sbjct: 303 GRGGSAAPPPLKEGEDSLQIMVPDRTVGLIIGRGGETIRDLQERSGCHINIVGENKSVNG 362
Query: 90 DRRCMLSGSPDQVQEARARIEELIDS 115
R L G+P + A+ I E++DS
Sbjct: 363 LRPVNLIGTPAAAKTAKELILEIVDS 388
Score = 38.9 bits (89), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E IQ+ + VG++IG+ G+ +++++ E+ RVQFV R C ++G Q +E
Sbjct: 217 ETIQIE--SSLVGLIIGRQGENLRRVEGESRCRVQFVPPSSPTEQYRPCKITGPRAQREE 274
Query: 105 ARARIEELI-DSVM 117
A+ I +I DS M
Sbjct: 275 AKEMINRIIRDSGM 288
>gi|195572282|ref|XP_002104125.1| GD18616 [Drosophila simulans]
gi|194200052|gb|EDX13628.1| GD18616 [Drosophila simulans]
Length = 330
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQV 102
+++ VP A G +IGKGG+ I LQ +TGARV+ + + P ++R C+++GS + +
Sbjct: 83 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAI 140
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 31/48 (64%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM 94
+++ VP + G++IGKGG IK+++ E+G+ VQ Q +D RC+
Sbjct: 176 VKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPKDVSLQERCI 223
>gi|170048061|ref|XP_001851517.1| nova [Culex quinquefasciatus]
gi|167870269|gb|EDS33652.1| nova [Culex quinquefasciatus]
Length = 534
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQV 102
VP A G +IGKGG+ I LQ + GARV+ + + P S+R C++SG+ D +
Sbjct: 33 VPSVAAGAIIGKGGETIASLQKDAGARVKMSKAHDFYPGTSERVCLISGTVDGI 86
Score = 40.0 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 30/48 (62%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM 94
++V VP + G++IGK G IK+++ ++G+ VQ Q ++ RC+
Sbjct: 122 VKVLVPNSTAGMIIGKAGAFIKQIKEDSGSYVQISQKPKELTLQERCI 169
>gi|358342542|dbj|GAA49985.1| RNA-binding protein Nova [Clonorchis sinensis]
Length = 820
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQE 104
+++ VP AVG +IGKGG+ I +Q ETGAR++ + + P +R C++ G+ D V
Sbjct: 1 MKILVPSGAVGAIIGKGGESIAHVQWETGARIKLSKPNDFYPGTMERVCLIQGTLDGV-- 58
Query: 105 ARARIEELIDSVMVEQ 120
R+ I M+E+
Sbjct: 59 --TRMHNYIMDRMLEK 72
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 35 GRGGMW------EVTW---EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRE 85
G G W + W + +++ VP G+VIGK G +K++++ TGA +Q Q +
Sbjct: 122 GASGAWPTVGGSRLPWGRHQQVKILVPNCTAGLVIGKVGSYVKEIKDRTGAFIQISQKSK 181
Query: 86 DDPSDRRCM-LSGSPDQVQEARARI 109
+ RC+ ++G PDQ + A A +
Sbjct: 182 EFNLMERCITIAGEPDQCRAAVALV 206
>gi|324529633|gb|ADY49026.1| Far upstream element-binding protein 2, partial [Ascaris suum]
Length = 214
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSD 90
+G GG ++T E++ +P A G+VIGKGG+ IK +Q + G ++ +Q +E
Sbjct: 116 DGGMSGGGRQITHEML---IPGAKCGLVIGKGGETIKNIQEQAGVKMVMIQETQESGGQP 172
Query: 91 RRCMLSGSPDQVQEARARIEELIDS 115
+ + G PD+V AR +E+++ S
Sbjct: 173 KPLRIIGEPDKVDTARRMVEDILQS 197
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLS 96
GG +V E I+V P VG+VIG+GG+ I ++Q+++ RVQ D + R+C L
Sbjct: 28 GGAGDVLIETIEV--PDHCVGLVIGRGGEQISQIQSQSNCRVQMSP-ESDGNNMRQCTLQ 84
Query: 97 GSPDQVQEARARIEELI 113
G+ V+ A++ I+++I
Sbjct: 85 GTKMAVERAKSMIQDVI 101
>gi|121483937|gb|ABM54277.1| FUBP3 [Pan paniscus]
Length = 280
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ--MREDDPSDRRCM 94
GG+ E+T+ VP G+VIGKGG+ IK + ++GA V+ + DP+ RR
Sbjct: 60 GGIQEITY-----TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFT 114
Query: 95 LSGSPDQVQEARARIEELI 113
+ G P Q++ AR I+E +
Sbjct: 115 IRGVPQQIEVARQLIDEKV 133
>gi|326674258|ref|XP_003200102.1| PREDICTED: RNA-binding protein Nova-1 isoform 2 [Danio rerio]
Length = 517
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
+V+++ VP+ VG ++GKGG + + Q TGAR+Q + E P +R+ ++GSP
Sbjct: 432 DVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGSPAAT 491
Query: 103 QEARARIEELI 113
Q A+ I + I
Sbjct: 492 QAAQYLISQRI 502
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 80 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNN 139
Query: 105 ARARIEELI 113
I E +
Sbjct: 140 VHDFIAEKV 148
Score = 40.8 bits (94), Expect = 0.17, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
++ VP + G++IGKGG +K + ++GA VQ Q + + +R +SG P+Q ++A
Sbjct: 179 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGINLQERVVTISGEPEQNRKA 237
>gi|350403532|ref|XP_003486830.1| PREDICTED: tudor and KH domain-containing protein-like [Bombus
impatiens]
Length = 608
Score = 49.3 bits (116), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 27 REFNENGDGRGGMWEVTWE-VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRE 85
R+ E+ R E++ I+ VP+ V VIG+GG MIK +QN+TG V F +
Sbjct: 31 RKDEEDTKSRKSQVEISKRYTIECSVPRQFVPAVIGRGGSMIKDIQNKTGTLVHFKEDNI 90
Query: 86 DDPSDRRCMLSGSPDQVQEARARIEELI 113
+ P +R C++ GS + V A I+ +I
Sbjct: 91 ECP-ERICVIKGSYESVYLAENMIKSII 117
Score = 39.3 bits (90), Expect = 0.54, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARV--QFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
VP+ A G +IG+GGD+I +Q +GA+V + + + +R+ + G+ Q+ A
Sbjct: 130 VPQKACGRIIGRGGDVIHHIQTVSGAKVIIESAFVASEPLVERKITIKGTSKQINTALEL 189
Query: 109 IEELI 113
I+E I
Sbjct: 190 IQEKI 194
>gi|358396212|gb|EHK45593.1| hypothetical protein TRIATDRAFT_317750 [Trichoderma atroviride IMI
206040]
Length = 569
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ VP AVG++IGKGG+ I+++QN TG ++ Q R L G+ + + +A+
Sbjct: 410 IYVPSDAVGMIIGKGGETIREMQNVTGCKINVAQSSGPGEVQREIALVGTRESIAQAKLA 469
Query: 109 IEELIDSV 116
I+E +D+V
Sbjct: 470 IDEKVDAV 477
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+Q+ VP VG++IG+GG+ I+ LQ +G + V + R L GS + A+
Sbjct: 293 MQIMVPDRTVGLIIGRGGETIRDLQERSGCHINIVGESKSVNGLRPVNLIGSREAAARAK 352
Query: 107 ARIEELIDS 115
I E++DS
Sbjct: 353 DFIMEIVDS 361
>gi|47216835|emb|CAG02726.1| unnamed protein product [Tetraodon nigroviridis]
Length = 457
Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
+V+++ VP+ VG ++GKGG + + Q TGAR+Q + E P +R+ ++GSP
Sbjct: 372 DVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAAT 431
Query: 103 QEARARIEELI 113
Q A+ I + I
Sbjct: 432 QAAQYLISQRI 442
Score = 43.1 bits (100), Expect = 0.041, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
++ VP + G++IGKGG +K + ++GA VQ Q E + +R +SG P+Q ++A
Sbjct: 120 KIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTISGEPEQNRKA 178
Score = 39.7 bits (91), Expect = 0.42, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS 89
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P+
Sbjct: 7 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPA 49
>gi|432895615|ref|XP_004076076.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Oryzias
latipes]
Length = 444
Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
+V+++ VP+ VG ++GKGG + + Q TGAR+Q + E P +R+ ++GSP
Sbjct: 359 DVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAAT 418
Query: 103 QEARARIEELI 113
Q A+ I + I
Sbjct: 419 QAAQYLISQRI 429
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 8 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNS 67
Query: 105 ARARIEELI 113
I E +
Sbjct: 68 VHNFIAEKV 76
Score = 42.4 bits (98), Expect = 0.069, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
++ VP + G++IGKGG +K + ++GA VQ Q E + +R +SG P+Q ++A
Sbjct: 107 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTISGEPEQNRKA 165
>gi|443712210|gb|ELU05631.1| hypothetical protein CAPTEDRAFT_229004 [Capitella teleta]
Length = 679
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 6/92 (6%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP---SDRRCMLSGSPDQ 101
E Q+CVP +AVG +IG G IK++ ++ A V ++DDP S+R + G+ D
Sbjct: 434 ETCQICVPNSAVGALIGAAGSNIKQIIRDSQAFVTIEPKKDDDPNPASERIVSIKGTQDS 493
Query: 102 VQEARARIEELIDSVMVEQFSGANFDKLRSTV 133
+ A + E + S E FSG + +LR+ +
Sbjct: 494 IWRASYYVFEKLKS---EGFSGNDDVRLRTAI 522
>gi|389585810|dbj|GAB68540.1| RNA-binding protein Nova-1, partial [Plasmodium cynomolgi strain B]
Length = 278
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ VPK+AV +IGKGG IK+LQ+ TGA++Q + RED ++R + G + + + +
Sbjct: 112 IVVPKSAVSAIIGKGGQQIKQLQDSTGAKIQ-ISSREDGLNERIISIIGPFESISDTAIK 170
Query: 109 IEELI 113
+ I
Sbjct: 171 VTNSI 175
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 4/98 (4%)
Query: 26 MREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRE 85
M E N+ G ++ + +++ V G VIGK G +I ++N+TG ++
Sbjct: 1 MEESNQGEKNNKGTSQLCF--VKMLVNNLVAGSVIGKNGSIITSIENKTGCSLKLSPTNS 58
Query: 86 DDPS--DRRCMLSGSPDQVQEARARIEELIDSVMVEQF 121
P+ +R +L G +Q+ A I + I + + F
Sbjct: 59 YFPNTQERVLVLCGKQEQINNALLIILDKIRQITTQNF 96
>gi|348524725|ref|XP_003449873.1| PREDICTED: RNA-binding protein Nova-1-like [Oreochromis niloticus]
Length = 503
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
+V+++ VP+ VG ++GKGG + + Q TGAR+Q + E P +R+ ++GSP
Sbjct: 418 DVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAAT 477
Query: 103 QEARARIEELI 113
Q A+ I + I
Sbjct: 478 QAAQYLISQRI 488
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 67 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNG 126
Query: 105 ARARIEELI 113
I E +
Sbjct: 127 VHNFIAEKV 135
Score = 42.4 bits (98), Expect = 0.069, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
++ VP + G++IGKGG +K + ++GA VQ Q E + +R +SG P+Q ++A
Sbjct: 166 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTISGEPEQNRKA 224
>gi|324529261|gb|ADY49000.1| Far upstream element-binding protein 2, partial [Ascaris suum]
Length = 218
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSD 90
+G GG ++T E++ +P A G+VIGKGG+ IK +Q + G ++ +Q +E
Sbjct: 116 DGGMSGGGRQITHEML---IPGAKCGLVIGKGGETIKNIQEQAGVKMVMIQETQESGGQP 172
Query: 91 RRCMLSGSPDQVQEARARIEELIDS 115
+ + G PD+V AR +E+++ S
Sbjct: 173 KPLRIIGEPDKVDTARRMVEDILQS 197
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLS 96
GG +V E I+V P VG+VIG+GG+ I ++Q+++ RVQ D + R+C L
Sbjct: 28 GGAGDVLIETIEV--PDHCVGLVIGRGGEQISQIQSQSNCRVQMSP-ESDGNNMRQCTLQ 84
Query: 97 GSPDQVQEARARIEELI 113
G+ V+ A++ I+++I
Sbjct: 85 GTKMAVERAKSMIQDVI 101
>gi|357144424|ref|XP_003573287.1| PREDICTED: uncharacterized protein LOC100834117 [Brachypodium
distachyon]
Length = 707
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP---SDRRCMLSGSPDQ 101
E ++ VP VG++IGKGG+ IK +Q +GAR+Q + + ++R ++G+ Q
Sbjct: 253 EQFEMSVPDNKVGLIIGKGGETIKNMQTRSGARIQLIPQHPPEGTTLTERTVRVTGNKKQ 312
Query: 102 VQEARARIEELIDSVMVEQFS 122
++ A+ I++ ++ V S
Sbjct: 313 IEAAKELIKQAMNQVFARNTS 333
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 6/77 (7%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRE--DDPSDRRCMLSGSPDQVQEARAR 108
VP VGV+IGK G+ I+ LQN +GA++Q + E D R L G+ QE+ +
Sbjct: 165 VPNNKVGVLIGKNGETIRNLQNSSGAKIQITKDGEVASDALTRPVELVGT----QESIDK 220
Query: 109 IEELIDSVMVEQFSGAN 125
E+LI SV+ E +G +
Sbjct: 221 AEQLIKSVIAEAEAGGS 237
>gi|189528952|ref|XP_001923490.1| PREDICTED: RNA-binding protein Nova-1 isoform 1 [Danio rerio]
Length = 496
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
+V+++ VP+ VG ++GKGG + + Q TGAR+Q + E P +R+ ++GSP
Sbjct: 411 DVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGSPAAT 470
Query: 103 QEARARIEELI 113
Q A+ I + I
Sbjct: 471 QAAQYLISQRI 481
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 59 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNN 118
Query: 105 ARARIEELI 113
I E +
Sbjct: 119 VHDFIAEKV 127
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
++ VP + G++IGKGG +K + ++GA VQ Q + + +R +SG P+Q ++A
Sbjct: 158 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGINLQERVVTISGEPEQNRKA 216
>gi|195997193|ref|XP_002108465.1| hypothetical protein TRIADDRAFT_19563 [Trichoplax adhaerens]
gi|190589241|gb|EDV29263.1| hypothetical protein TRIADDRAFT_19563, partial [Trichoplax
adhaerens]
Length = 246
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS-DRRCMLSGSPDQVQEARARI 109
VP+ G++IGK G +K+LQ +TG +++ R D S D C+ S V A+ RI
Sbjct: 14 VPEKCFGMIIGKKGSNMKQLQQDTGTKIKLPSSRNSDASNDLTCITGSSKKGVISAKVRI 73
Query: 110 EELIDS 115
E L+DS
Sbjct: 74 ELLVDS 79
>gi|159163537|pdb|1X4M|A Chain A, Solution Structure Of Kh Domain In Far Upstream Element
Binding Protein 1
Length = 94
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%), Gaps = 7/72 (9%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP----SDRRCMLSGSPDQ 101
V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q D P +D+ ++G P +
Sbjct: 16 VQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQ---DGPQNTGADKPLRITGDPYK 72
Query: 102 VQEARARIEELI 113
VQ+A+ + ELI
Sbjct: 73 VQQAKEMVLELI 84
>gi|25012554|gb|AAN71378.1| RE36563p, partial [Drosophila melanogaster]
Length = 605
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGS 98
E T+ +++ VP A G +IGKGG+ I LQ +TGARV+ + + P ++R C+++GS
Sbjct: 96 ETTYH-MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGS 154
Query: 99 PDQV 102
+ +
Sbjct: 155 TEAI 158
Score = 43.9 bits (102), Expect = 0.022, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM 94
+++ VP + G++IGKGG IK+++ E+G+ VQ Q D RC+
Sbjct: 194 VKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPTDVSLQERCI 241
>gi|410914634|ref|XP_003970792.1| PREDICTED: RNA-binding protein Nova-1-like [Takifugu rubripes]
Length = 501
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
+V+++ VP+ VG ++GKGG + + Q TGAR+Q + E P +R+ ++GSP
Sbjct: 416 DVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAAT 475
Query: 103 QEARARIEELI 113
Q A+ I + I
Sbjct: 476 QAAQYLISQRI 486
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 65 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNG 124
Query: 105 ARARIEELI 113
I E +
Sbjct: 125 VHNFIAEKV 133
Score = 42.7 bits (99), Expect = 0.045, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
++ VP + G++IGKGG +K + ++GA VQ Q E + +R +SG P+Q ++A
Sbjct: 164 KIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTISGEPEQNRKA 222
>gi|85091498|ref|XP_958931.1| hypothetical protein NCU09352 [Neurospora crassa OR74A]
gi|28920323|gb|EAA29695.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 579
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ VP AVG++IGKGG+ I+++QN TG ++ Q ++R L G+ + + A+
Sbjct: 423 IFVPSEAVGMIIGKGGETIREMQNTTGCKINVSQSSGAGETEREIGLVGTREAINRAKRA 482
Query: 109 IEELIDSVMVEQFSGA 124
IE+ +D+ + GA
Sbjct: 483 IEDKVDAAKQKSSGGA 498
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 35 GRGGMWEVTW-----EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS 89
GRGG + +Q+ VP VG++IG+GG+ I+ LQ +G + V +
Sbjct: 303 GRGGSAAPPPLKEGEDSLQIMVPDRTVGLIIGRGGETIRDLQERSGCHINIVGENKSVNG 362
Query: 90 DRRCMLSGSPDQVQEARARIEELIDS 115
R L G+P + A+ I E++DS
Sbjct: 363 LRPVNLIGTPAAAKTAKELILEIVDS 388
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E IQ+ + VG++IG+ G+ +++++ E+ RVQFV R C ++G Q +E
Sbjct: 217 ETIQIE--SSLVGLIIGRQGENLRRVEGESRCRVQFVPPSSPTEQYRPCKITGPRAQREE 274
Query: 105 ARARIEELI-DSVM 117
A+ I +I DS M
Sbjct: 275 AKEMINRIIRDSGM 288
>gi|442762993|gb|JAA73655.1| Putative a kinase anchor protein, partial [Ixodes ricinus]
Length = 311
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 46/75 (61%), Gaps = 4/75 (5%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEA 105
V++V VPKA VG VIG+ G IK++Q +T ++ F + DR ++ G+P V+EA
Sbjct: 49 VVRVTVPKAVVGGVIGRQGANIKQIQEKTNTKINFDSPGNGEECDRFAVIRGTPCGVREA 108
Query: 106 RARIEELIDSVMVEQ 120
EEL+++ + EQ
Sbjct: 109 ----EELLNACIEEQ 119
Score = 35.4 bits (80), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCM-LSGSPDQVQEAR 106
V VP A G +IG+ G+ I+++ + A++ + +D DP+ +C+ ++G+ DQ++ A
Sbjct: 127 VFVPSRACGRIIGRNGESIRQMCRMSSAKILVDRSGDDRDPNSLKCITITGTKDQIRTAV 186
Query: 107 ARIEE 111
I+E
Sbjct: 187 IMIDE 191
>gi|324526039|gb|ADY48622.1| Far upstream element-binding protein 2, partial [Ascaris suum]
Length = 255
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 49/85 (57%), Gaps = 4/85 (4%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSD 90
+G GG ++T E++ +P A G+VIGKGG+ IK +Q + G ++ +Q +E
Sbjct: 116 DGGMSGGGRQITHEML---IPGAKCGLVIGKGGETIKNIQEQAGVKMVMIQETQESGGQP 172
Query: 91 RRCMLSGSPDQVQEARARIEELIDS 115
+ + G PD+V AR +E+++ S
Sbjct: 173 KPLRIIGEPDKVDTARRMVEDILQS 197
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLS 96
GG +V E I+V P VG+VIG+GG+ I ++Q+++ RVQ D + R+C L
Sbjct: 28 GGAGDVLIETIEV--PDHCVGLVIGRGGEQISQIQSQSNCRVQMSP-ESDGNNMRQCTLQ 84
Query: 97 GSPDQVQEARARIEELI 113
G+ V+ A++ I+++I
Sbjct: 85 GTKMAVERAKSMIQDVI 101
>gi|449449385|ref|XP_004142445.1| PREDICTED: RNA-binding protein Nova-2-like [Cucumis sativus]
gi|449527683|ref|XP_004170839.1| PREDICTED: RNA-binding protein Nova-2-like [Cucumis sativus]
Length = 326
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 39 MWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLS 96
M + T+ I+ V AA G VIGKGG I Q+++GAR+Q + E P +DR M+S
Sbjct: 31 MEKATY--IRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMVS 88
Query: 97 GSPDQVQEA 105
GS +++ +A
Sbjct: 89 GSINEILKA 97
>gi|395733400|ref|XP_003776231.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 2
[Pongo abelii]
Length = 466
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 31/94 (32%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++ +E+GA ++ + E DR
Sbjct: 376 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQICHESGASIKIDEPLEGS-EDRI 434
Query: 93 CMLSGSPDQVQEARARIEELIDSVMVEQFSGANF 126
++G+ +Q+Q A+ ++ + V+Q+SG F
Sbjct: 435 ITITGTQEQIQNAQYLLQNSVKH--VKQYSGKFF 466
>gi|351712576|gb|EHB15495.1| RNA-binding protein Nova-1 [Heterocephalus glaber]
Length = 458
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
+V+++ VP+ VG ++GKGG + + Q TGAR+Q + E P +R+ ++G+P
Sbjct: 373 DVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAAT 432
Query: 103 QEARARIEELI 113
Q A+ I + I
Sbjct: 433 QAAQYLITQRI 443
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
+++ VP + G++IGKGG +K + ++GA VQ Q + + +R +SG P+Q ++A
Sbjct: 125 VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 184
Query: 106 RARIEELIDSVMVEQFSGA 124
+E +I + + SG+
Sbjct: 185 ---VELIIQKIQEDPQSGS 200
>gi|327289205|ref|XP_003229315.1| PREDICTED: RNA-binding protein Nova-1-like [Anolis carolinensis]
Length = 507
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGS 98
E T +++++ VP+ VG ++GKGG + + Q TGAR+Q + E P +R+ ++G+
Sbjct: 418 ESTKDMVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGT 477
Query: 99 PDQVQEARARIEELI 113
P Q A+ I + +
Sbjct: 478 PAATQAAQYLISQRV 492
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
+V VP + G++IGKGG +K + ++GA VQ Q E + +R +SG P+Q+ +A
Sbjct: 171 KVIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPEGINLQERVVTISGEPEQIHKA 229
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 72 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 131
Query: 105 ARARIEELIDSV 116
I E + +
Sbjct: 132 VHNFIAEKVREI 143
>gi|240276217|gb|EER39729.1| KH domain-containing protein [Ajellomyces capsulatus H143]
Length = 551
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
+P AVG++IGKGGD IK++Q TG R+ D +DR L GS ++EA+ I
Sbjct: 383 IPPDAVGMIIGKGGDTIKEMQAVTGCRINIQSPVGRD-ADREVTLVGSRAAIEEAKRMIM 441
Query: 111 ELIDSV 116
E IDS
Sbjct: 442 EKIDSA 447
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
+ +++ VP VG++IG+GG+ I+ LQ +G V V + R L GSPD +
Sbjct: 276 DAVRIMVPDRTVGLIIGRGGETIRDLQERSGCHVNIVNENKSINGLRPVNLIGSPDATER 335
Query: 105 ARARIEELIDS 115
A+ I E+++S
Sbjct: 336 AKNLILEIVES 346
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 35/53 (66%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGS 98
V + V + VG++IG+ G+ +++++++TG R+QF+ + S R C ++GS
Sbjct: 177 VETISVESSLVGLIIGRQGESLRRIESDTGTRIQFLDNADPSSSVRLCKITGS 229
>gi|294868472|ref|XP_002765555.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239865598|gb|EEQ98272.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 384
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 36 RGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCML 95
R G E + E + V VP+ AVG IGKGGD IK++++ETG R++ Q ++ R +
Sbjct: 6 RSGELENSVERV-VEVPQKAVGKAIGKGGDNIKRIRHETGVRIEVDQSTKEQGFSRFVVT 64
Query: 96 SGSPDQVQEARARIEELIDS 115
+ DQ++ A ++ E+I S
Sbjct: 65 AAHGDQIERAVEQLNEIIQS 84
>gi|390177064|ref|XP_003736269.1| GA30025, isoform C [Drosophila pseudoobscura pseudoobscura]
gi|388858893|gb|EIM52342.1| GA30025, isoform C [Drosophila pseudoobscura pseudoobscura]
Length = 554
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGS 98
E T+ +++ VP A G +IGKGG+ I LQ +TGARV+ + + P ++R C+++GS
Sbjct: 47 ETTYH-MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGS 105
Query: 99 PDQV 102
+ +
Sbjct: 106 TEAI 109
Score = 43.1 bits (100), Expect = 0.039, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 31/48 (64%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM 94
+++ VP + G++IGKGG IK+++ ++G+ VQ Q +D RC+
Sbjct: 145 VKILVPNSTAGMIIGKGGAFIKQIKEDSGSYVQISQKPKDVSLQERCI 192
>gi|119586398|gb|EAW65994.1| neuro-oncological ventral antigen 1, isoform CRA_d [Homo sapiens]
Length = 361
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
+V+++ VP+ VG ++GKGG + + Q TGAR+Q + E P +R+ ++G+P
Sbjct: 276 DVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAAT 335
Query: 103 QEARARIEELI 113
Q A+ I + I
Sbjct: 336 QAAQYLITQRI 346
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
+++ VP + G++IGKGG +K + ++GA VQ Q + + +R +SG P+Q ++A
Sbjct: 28 VKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 87
Query: 106 RARIEELIDSVMVEQFSGA 124
+E +I + + SG+
Sbjct: 88 ---VELIIQKIQEDPQSGS 103
>gi|432895613|ref|XP_004076075.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Oryzias
latipes]
Length = 503
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
+V+++ VP+ VG ++GKGG + + Q TGAR+Q + E P +R+ ++GSP
Sbjct: 418 DVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAAT 477
Query: 103 QEARARIEELI 113
Q A+ I + I
Sbjct: 478 QAAQYLISQRI 488
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 67 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNS 126
Query: 105 ARARIEELI 113
I E +
Sbjct: 127 VHNFIAEKV 135
Score = 42.0 bits (97), Expect = 0.078, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
++ VP + G++IGKGG +K + ++GA VQ Q E + +R +SG P+Q ++A
Sbjct: 166 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTISGEPEQNRKA 224
>gi|325089918|gb|EGC43228.1| KH domain-containing protein [Ajellomyces capsulatus H88]
Length = 551
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
+P AVG++IGKGGD IK++Q TG R+ D +DR L GS ++EA+ I
Sbjct: 383 IPPDAVGMIIGKGGDTIKEMQAVTGCRINIQSPVGRD-ADREVTLVGSRGAIEEAKRMIM 441
Query: 111 ELIDSV 116
E IDS
Sbjct: 442 EKIDSA 447
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
+ +++ VP VG++IG+GG+ I+ LQ +G V V + R L GSPD +
Sbjct: 276 DAVRIMVPDRTVGLIIGRGGETIRDLQERSGCHVNIVNENKSINGLRPVNLIGSPDATER 335
Query: 105 ARARIEELIDS 115
A+ I E+++S
Sbjct: 336 AKNLILEIVES 346
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 35/53 (66%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGS 98
V + V + VG++IG+ G+ +++++++TG R+QF+ + S R C ++GS
Sbjct: 177 VETISVESSLVGLIIGRQGESLRRIESDTGTRIQFLDNADPSSSVRLCKITGS 229
>gi|225559888|gb|EEH08170.1| KH domain-containing protein [Ajellomyces capsulatus G186AR]
gi|225559938|gb|EEH08220.1| KH domain-containing protein [Ajellomyces capsulatus G186AR]
Length = 551
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
+P AVG++IGKGGD IK++Q TG R+ D +DR L GS ++EA+ I
Sbjct: 383 IPPDAVGMIIGKGGDTIKEMQAVTGCRINIQSPVGRD-ADREVTLVGSRGAIEEAKRMIM 441
Query: 111 ELIDSV 116
E IDS
Sbjct: 442 EKIDSA 447
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
+ +++ VP VG++IG+GG+ I+ LQ +G V V + R L GSPD +
Sbjct: 276 DAVRIMVPDRTVGLIIGRGGETIRDLQERSGCHVNIVNENKSINGLRPVNLIGSPDATER 335
Query: 105 ARARIEELIDS 115
A+ I E+++S
Sbjct: 336 AKNLILEIVES 346
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 35/53 (66%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGS 98
V + V + VG++IG+ G+ +++++++TG R+QF+ + S R C ++GS
Sbjct: 177 VETISVESSLVGLIIGRQGESLRRIESDTGTRIQFLDNADPSSSVRLCKITGS 229
>gi|62088704|dbj|BAD92799.1| heterogeneous nuclear ribonucleoprotein K isoform a variant [Homo
sapiens]
Length = 442
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 354 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 412
Query: 93 CMLSGSPDQVQEARARIE 110
++G+ DQ+Q A+ ++
Sbjct: 413 ITITGTQDQIQNAQYLLQ 430
>gi|390177070|ref|XP_003736272.1| GA30025, isoform F [Drosophila pseudoobscura pseudoobscura]
gi|388858896|gb|EIM52345.1| GA30025, isoform F [Drosophila pseudoobscura pseudoobscura]
Length = 800
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGS 98
E T+ +++ VP A G +IGKGG+ I LQ +TGARV+ + + P ++R C+++GS
Sbjct: 261 ETTYH-MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGS 319
Query: 99 PDQV 102
+ +
Sbjct: 320 TEAI 323
Score = 43.1 bits (100), Expect = 0.040, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 31/48 (64%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM 94
+++ VP + G++IGKGG IK+++ ++G+ VQ Q +D RC+
Sbjct: 359 VKILVPNSTAGMIIGKGGAFIKQIKEDSGSYVQISQKPKDVSLQERCI 406
>gi|348578485|ref|XP_003475013.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Cavia
porcellus]
Length = 338
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 250 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 308
Query: 93 CMLSGSPDQVQEARARIE 110
++G+ DQ+Q A+ ++
Sbjct: 309 ITITGTQDQIQNAQYLLQ 326
>gi|460789|emb|CAA51267.1| transformation upregulated nuclear protein [Homo sapiens]
Length = 464
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 376 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 434
Query: 93 CMLSGSPDQVQEARARIE 110
++G+ DQ+Q A+ ++
Sbjct: 435 ITITGTQDQIQNAQYLLQ 452
>gi|195158519|ref|XP_002020133.1| GL13824 [Drosophila persimilis]
gi|194116902|gb|EDW38945.1| GL13824 [Drosophila persimilis]
Length = 554
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGS 98
E T+ +++ VP A G +IGKGG+ I LQ +TGARV+ + + P ++R C+++GS
Sbjct: 69 ETTYH-MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGS 127
Query: 99 PDQV 102
+ +
Sbjct: 128 TEAI 131
Score = 43.1 bits (100), Expect = 0.040, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 31/48 (64%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM 94
+++ VP + G++IGKGG IK+++ ++G+ VQ Q +D RC+
Sbjct: 167 VKILVPNSTAGMIIGKGGAFIKQIKEDSGSYVQISQKPKDVSLQERCI 214
>gi|1083569|pir||A54143 kappa-B motif-binding phosphoprotein - mouse
Length = 464
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 376 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 434
Query: 93 CMLSGSPDQVQEARARIE 110
++G+ DQ+Q A+ ++
Sbjct: 435 ITITGTQDQIQNAQYLLQ 452
>gi|14165437|ref|NP_112553.1| heterogeneous nuclear ribonucleoprotein K isoform a [Homo sapiens]
gi|14165439|ref|NP_002131.2| heterogeneous nuclear ribonucleoprotein K isoform a [Homo sapiens]
gi|197101649|ref|NP_001126766.1| heterogeneous nuclear ribonucleoprotein K [Pongo abelii]
gi|388454448|ref|NP_001253875.1| heterogeneous nuclear ribonucleoprotein K [Macaca mulatta]
gi|114625208|ref|XP_001155079.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 18
[Pan troglodytes]
gi|114625210|ref|XP_001155315.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 22
[Pan troglodytes]
gi|149758457|ref|XP_001489114.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 1
[Equus caballus]
gi|296189573|ref|XP_002742828.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 1
[Callithrix jacchus]
gi|296189575|ref|XP_002742829.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 2
[Callithrix jacchus]
gi|296189579|ref|XP_002742831.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 4
[Callithrix jacchus]
gi|301758414|ref|XP_002915066.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Ailuropoda melanoleuca]
gi|332236647|ref|XP_003267511.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 1
[Nomascus leucogenys]
gi|332236651|ref|XP_003267513.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 3
[Nomascus leucogenys]
gi|344272026|ref|XP_003407837.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein K-like [Loxodonta africana]
gi|395819298|ref|XP_003783031.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K [Otolemur
garnettii]
gi|397475599|ref|XP_003809221.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 1 [Pan
paniscus]
gi|397475603|ref|XP_003809223.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 3 [Pan
paniscus]
gi|397475609|ref|XP_003809226.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 6 [Pan
paniscus]
gi|402897753|ref|XP_003911909.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 1
[Papio anubis]
gi|402897755|ref|XP_003911910.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 2
[Papio anubis]
gi|402897761|ref|XP_003911913.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 5
[Papio anubis]
gi|403300938|ref|XP_003941169.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 1
[Saimiri boliviensis boliviensis]
gi|403300942|ref|XP_003941171.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 3
[Saimiri boliviensis boliviensis]
gi|403300944|ref|XP_003941172.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 4
[Saimiri boliviensis boliviensis]
gi|410978211|ref|XP_003995489.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 1
[Felis catus]
gi|410978213|ref|XP_003995490.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 2
[Felis catus]
gi|426362129|ref|XP_004048233.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 1
[Gorilla gorilla gorilla]
gi|426362131|ref|XP_004048234.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 2
[Gorilla gorilla gorilla]
gi|75056718|sp|Q5R5H8.1|HNRPK_PONAB RecName: Full=Heterogeneous nuclear ribonucleoprotein K;
Short=hnRNP K
gi|75075750|sp|Q4R4M6.1|HNRPK_MACFA RecName: Full=Heterogeneous nuclear ribonucleoprotein K;
Short=hnRNP K
gi|12653175|gb|AAH00355.1| Heterogeneous nuclear ribonucleoprotein K [Homo sapiens]
gi|13879427|gb|AAH06694.1| Hnrpk protein [Mus musculus]
gi|26347481|dbj|BAC37389.1| unnamed protein product [Mus musculus]
gi|38197650|gb|AAH61867.1| Hnrpk protein [Rattus norvegicus]
gi|48145659|emb|CAG33052.1| HNRPK [Homo sapiens]
gi|55732576|emb|CAH92988.1| hypothetical protein [Pongo abelii]
gi|58475965|gb|AAH89328.1| Hnrpk protein [Mus musculus]
gi|61359196|gb|AAX41682.1| heterogeneous nuclear ribonucleoprotein K [synthetic construct]
gi|67971214|dbj|BAE01949.1| unnamed protein product [Macaca fascicularis]
gi|74139420|dbj|BAE40851.1| unnamed protein product [Mus musculus]
gi|74141211|dbj|BAE35915.1| unnamed protein product [Mus musculus]
gi|74178242|dbj|BAE29905.1| unnamed protein product [Mus musculus]
gi|74183280|dbj|BAE22563.1| unnamed protein product [Mus musculus]
gi|74185026|dbj|BAE39121.1| unnamed protein product [Mus musculus]
gi|119583081|gb|EAW62677.1| heterogeneous nuclear ribonucleoprotein K, isoform CRA_c [Homo
sapiens]
gi|123979648|gb|ABM81653.1| heterogeneous nuclear ribonucleoprotein K [synthetic construct]
gi|123994453|gb|ABM84828.1| heterogeneous nuclear ribonucleoprotein K [synthetic construct]
gi|158256108|dbj|BAF84025.1| unnamed protein product [Homo sapiens]
gi|197692227|dbj|BAG70077.1| heterogeneous nuclear ribonucleoprotein K isoform a [Homo sapiens]
gi|197692481|dbj|BAG70204.1| heterogeneous nuclear ribonucleoprotein K isoform a [Homo sapiens]
gi|351696771|gb|EHA99689.1| Heterogeneous nuclear ribonucleoprotein K [Heterocephalus glaber]
gi|380812328|gb|AFE78038.1| heterogeneous nuclear ribonucleoprotein K isoform a [Macaca
mulatta]
gi|380812330|gb|AFE78039.1| heterogeneous nuclear ribonucleoprotein K isoform a [Macaca
mulatta]
gi|410337439|gb|JAA37666.1| heterogeneous nuclear ribonucleoprotein K [Pan troglodytes]
gi|417401379|gb|JAA47578.1| Putative polyc-binding hnrnp-k protein hrb57a/hnrnp [Desmodus
rotundus]
Length = 464
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 376 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 434
Query: 93 CMLSGSPDQVQEARARIE 110
++G+ DQ+Q A+ ++
Sbjct: 435 ITITGTQDQIQNAQYLLQ 452
>gi|77736071|ref|NP_001029734.1| heterogeneous nuclear ribonucleoprotein K [Bos taurus]
gi|426219903|ref|XP_004004157.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 1
[Ovis aries]
gi|426219905|ref|XP_004004158.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 2
[Ovis aries]
gi|426224282|ref|XP_004006301.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Ovis
aries]
gi|426256846|ref|XP_004022048.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 1
[Ovis aries]
gi|108860777|sp|Q3T0D0.1|HNRPK_BOVIN RecName: Full=Heterogeneous nuclear ribonucleoprotein K;
Short=hnRNP K
gi|74354615|gb|AAI02451.1| Heterogeneous nuclear ribonucleoprotein K [Bos taurus]
gi|296484523|tpg|DAA26638.1| TPA: heterogeneous nuclear ribonucleoprotein K [Bos taurus]
Length = 464
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 376 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 434
Query: 93 CMLSGSPDQVQEARARIE 110
++G+ DQ+Q A+ ++
Sbjct: 435 ITITGTQDQIQNAQYLLQ 452
>gi|320542558|ref|NP_001189200.1| pasilla, isoform L [Drosophila melanogaster]
gi|318068744|gb|ADV37291.1| pasilla, isoform L [Drosophila melanogaster]
Length = 758
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGS 98
E T+ +++ VP A G +IGKGG+ I LQ +TGARV+ + + P ++R C+++GS
Sbjct: 249 ETTYH-MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGS 307
Query: 99 PDQV 102
+ +
Sbjct: 308 TEAI 311
Score = 43.5 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM 94
+++ VP + G++IGKGG IK+++ E+G+ VQ Q D RC+
Sbjct: 347 VKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPTDVSLQERCI 394
>gi|345329393|ref|XP_001506808.2| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 2
[Ornithorhynchus anatinus]
Length = 464
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 376 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 434
Query: 93 CMLSGSPDQVQEARARIE 110
++G+ DQ+Q A+ ++
Sbjct: 435 ITITGTQDQIQNAQYLLQ 452
>gi|390177066|ref|XP_003736270.1| GA30025, isoform D [Drosophila pseudoobscura pseudoobscura]
gi|388858894|gb|EIM52343.1| GA30025, isoform D [Drosophila pseudoobscura pseudoobscura]
Length = 576
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGS 98
E T+ +++ VP A G +IGKGG+ I LQ +TGARV+ + + P ++R C+++GS
Sbjct: 69 ETTYH-MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGS 127
Query: 99 PDQV 102
+ +
Sbjct: 128 TEAI 131
Score = 42.7 bits (99), Expect = 0.042, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 31/48 (64%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM 94
+++ VP + G++IGKGG IK+++ ++G+ VQ Q +D RC+
Sbjct: 167 VKILVPNSTAGMIIGKGGAFIKQIKEDSGSYVQISQKPKDVSLQERCI 214
>gi|194741910|ref|XP_001953430.1| GF17214 [Drosophila ananassae]
gi|190626489|gb|EDV42013.1| GF17214 [Drosophila ananassae]
Length = 532
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGS 98
E T+ +++ VP A G +IGKGG+ I LQ +TGARV+ + + P ++R C+++GS
Sbjct: 63 ETTYH-MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGS 121
Query: 99 PDQV 102
+ +
Sbjct: 122 TEAI 125
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 31/48 (64%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM 94
+++ VP + G++IGKGG IK+++ E+G+ VQ Q +D RC+
Sbjct: 161 VKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPKDVSLQERCI 208
>gi|378731630|gb|EHY58089.1| hypothetical protein HMPREF1120_06107 [Exophiala dermatitidis
NIH/UT8656]
Length = 540
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 41/62 (66%)
Query: 53 KAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEEL 112
K+ VG++IG+ G+ +++++N TGARVQF+ E + R C +SGS A+A I ++
Sbjct: 187 KSVVGLIIGRAGENLRRVENTTGARVQFLDGPEVAGTQRHCRISGSRSSRAAAKAEIFKV 246
Query: 113 ID 114
I+
Sbjct: 247 IE 248
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 38/69 (55%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+Q+ VP VG++IG+GG+ I+ LQ+ +G + V + R L GS Q AR
Sbjct: 280 LQMMVPDRTVGLIIGRGGETIRDLQDRSGCHINIVGENKSVNGMRPVNLIGSQSAQQYAR 339
Query: 107 ARIEELIDS 115
I E+++S
Sbjct: 340 DLILEIVES 348
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ VP AVG++IGK G+ I+ +QN+TG ++ V +R L G+ V+ A+
Sbjct: 373 IVVPGEAVGMIIGKKGESIRDMQNQTGCKIN-VSPDNGRGVEREIGLVGTRQAVEAAKRA 431
Query: 109 IEELIDSV 116
I E +D+V
Sbjct: 432 IMEKVDAV 439
>gi|354500002|ref|XP_003512092.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 3
[Cricetulus griseus]
Length = 440
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 352 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 410
Query: 93 CMLSGSPDQVQEARARIE 110
++G+ DQ+Q A+ ++
Sbjct: 411 ITITGTQDQIQNAQYLLQ 428
>gi|334310485|ref|XP_001369484.2| PREDICTED: RNA-binding protein Nova-1-like [Monodelphis domestica]
Length = 731
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
+V+++ VP+ VG ++GKGG + + Q TGAR+Q + E P +R+ ++G+P
Sbjct: 646 DVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAAT 705
Query: 103 QEARARIEELI 113
Q A+ I + I
Sbjct: 706 QAAQYLITQRI 716
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 276 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNA 335
Query: 105 ARARIEELI 113
I E I
Sbjct: 336 VHGFIAEKI 344
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
+++ VP + G++IGKGG +K + ++GA VQ Q + + +R +SG P+Q ++A
Sbjct: 398 VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 457
Query: 106 RARIEELIDSVMVEQFSGA 124
+E +I + + SG+
Sbjct: 458 ---VELIIQKIQEDPQSGS 473
>gi|392333155|ref|XP_003752811.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Rattus
norvegicus]
Length = 463
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 31/100 (31%), Positives = 55/100 (55%), Gaps = 8/100 (8%)
Query: 29 FNENGDGRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED 86
++ GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E
Sbjct: 370 YDSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEG 429
Query: 87 DPSDRRCMLSGSPDQVQEARARIEELIDSVMVEQFSGANF 126
DR ++G+ DQ+Q + ++ V+Q+SG F
Sbjct: 430 S-EDRIITITGTQDQIQNTQYLLQN-----SVKQYSGKFF 463
>gi|297467989|ref|XP_001257255.3| PREDICTED: RNA-binding protein Nova-1-like [Bos taurus]
gi|311260932|ref|XP_001924448.2| PREDICTED: RNA-binding protein Nova-1-like [Sus scrofa]
gi|338717979|ref|XP_001488883.3| PREDICTED: RNA-binding protein Nova-1-like [Equus caballus]
gi|397475481|ref|XP_003809167.1| PREDICTED: RNA-binding protein Nova-1-like isoform 3 [Pan paniscus]
gi|426248344|ref|XP_004017923.1| PREDICTED: RNA-binding protein Nova-1 [Ovis aries]
gi|149051187|gb|EDM03360.1| neuro-oncological ventral antigen 1, isoform CRA_a [Rattus
norvegicus]
gi|431917816|gb|ELK17050.1| RNA-binding protein Nova-1 [Pteropus alecto]
Length = 385
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
+V+++ VP+ VG ++GKGG + + Q TGAR+Q + E P +R+ ++G+P
Sbjct: 300 DVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAAT 359
Query: 103 QEARARIEELI 113
Q A+ I + I
Sbjct: 360 QAAQYLITQRI 370
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
+++ VP + G++IGKGG +K + ++GA VQ Q + + +R +SG P+Q ++A
Sbjct: 52 VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 111
Query: 106 RARIEELIDSVMVEQFSGA 124
+E +I + + SG+
Sbjct: 112 ---VELIIQKIQEDPQSGS 127
>gi|299029|gb|AAB26047.1| pre-mRNA binding K protein, hnRNP K [Xenopus laevis, Peptide, 396
aa]
Length = 396
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
QV +PK G +IGKGG IK++++E+GA ++ + E DR ++G+ DQ+Q AR
Sbjct: 321 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-DDRIITITGTQDQIQNARF 379
Query: 108 RIEELIDSVMVEQFS 122
++ V+QFS
Sbjct: 380 LLQN-----SVKQFS 389
>gi|398409392|ref|XP_003856161.1| hypothetical protein MYCGRDRAFT_107063 [Zymoseptoria tritici
IPO323]
gi|339476046|gb|EGP91137.1| hypothetical protein MYCGRDRAFT_107063 [Zymoseptoria tritici
IPO323]
Length = 1907
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E IQV A VG++IG+ G+ ++K+++E+GARVQF+Q + +R C +SG +
Sbjct: 181 ETIQVK--SALVGLIIGRNGENLRKVESESGARVQFLQAQGSHVVERDCTISGPLRARES 238
Query: 105 ARARIEELID 114
A+A I +I+
Sbjct: 239 AKAAIFSIIE 248
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 5/70 (7%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSD--RRCMLSGSPDQVQEAR 106
+ VP AVG++IGKGG+ IK +Q TG ++ Q + P D R L+GS + EA
Sbjct: 397 ISVPSQAVGMIIGKGGETIKDMQRTTGCKINVNQPK---PPDIYREIDLAGSASAMAEAE 453
Query: 107 ARIEELIDSV 116
I E +++V
Sbjct: 454 KVIWEKVETV 463
Score = 39.3 bits (90), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
Q+ VP VG++IG+GG+ IK LQ +G V V + R L GS A+
Sbjct: 285 QIMVPDKTVGLIIGRGGETIKDLQERSGCHVNIVGENKSVNGLRPVNLIGSERATATAKE 344
Query: 108 RIEELIDS 115
I E+++S
Sbjct: 345 MILEIVES 352
>gi|221043658|dbj|BAH13506.1| unnamed protein product [Homo sapiens]
Length = 385
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
+V+++ VP+ VG ++GKGG + + Q TGAR+Q + E P +R+ ++G+P
Sbjct: 300 DVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAAT 359
Query: 103 QEARARIEELI 113
Q A+ I + I
Sbjct: 360 QAAQYLITQRI 370
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
+++ VP + G++IGKGG +K + ++GA VQ Q + + +R +SG P+Q ++A
Sbjct: 52 VKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 111
Query: 106 RARIEELIDSVMVEQFSGA 124
+E +I + + SG+
Sbjct: 112 ---VELIIQKIQEDPQSGS 127
>gi|168277712|dbj|BAG10834.1| heterogeneous nuclear ribonucleoprotein K [synthetic construct]
gi|184186906|gb|ACC69193.1| heterogeneous nuclear ribonucleoprotein K [Mus musculus]
Length = 440
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 352 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 410
Query: 93 CMLSGSPDQVQEARARIE 110
++G+ DQ+Q A+ ++
Sbjct: 411 ITITGTQDQIQNAQYLLQ 428
>gi|442618214|ref|NP_001262415.1| pasilla, isoform R [Drosophila melanogaster]
gi|440217247|gb|AGB95797.1| pasilla, isoform R [Drosophila melanogaster]
Length = 780
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGS 98
E T+ +++ VP A G +IGKGG+ I LQ +TGARV+ + + P ++R C+++GS
Sbjct: 271 ETTYH-MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGS 329
Query: 99 PDQV 102
+ +
Sbjct: 330 TEAI 333
Score = 43.5 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM 94
+++ VP + G++IGKGG IK+++ E+G+ VQ Q D RC+
Sbjct: 369 VKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPTDVSLQERCI 416
>gi|452821097|gb|EME28131.1| hypothetical protein isoform 1 [Galdieria sulphuraria]
gi|452821098|gb|EME28132.1| hypothetical protein isoform 2 [Galdieria sulphuraria]
Length = 590
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 40/137 (29%), Positives = 68/137 (49%), Gaps = 22/137 (16%)
Query: 3 SIEFQQSRRWQQGIGRNNDNFGNMR----EFNENGDGRGGMWEVTWEVIQ---------- 48
S+E+Q +R + + +N+ F N+ GD M+++ V
Sbjct: 65 SVEYQDTR--IESVETSNNTFNRAAPDEVALNKEGDNHVSMYKIEQSVSSEMGENPDDIK 122
Query: 49 ---VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQ 103
+ VPK AVG +IGKGG+ IK+L ++GA ++ V+ R+ D S +R + G + +Q
Sbjct: 123 MDFIEVPKEAVGFIIGKGGETIKELSMKSGAYME-VERRDIDASSANRLFRIQGISNHIQ 181
Query: 104 EARARIEELIDSVMVEQ 120
A+ I E + V+V Q
Sbjct: 182 LAKQLILEKVAGVLVGQ 198
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 40/74 (54%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+++ +P VG +IGK G I++LQ +GAR+Q + E D R ++G P V+ A+
Sbjct: 413 LRIQIPNDKVGWLIGKSGSTIRELQQRSGARIQVAKPSETDIHTRSVTITGPPPFVEIAK 472
Query: 107 ARIEELIDSVMVEQ 120
I E + + Q
Sbjct: 473 QLIAEKLAGYYMRQ 486
Score = 39.3 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRE--DDPSDRRCMLSGSPDQVQEAR 106
+ VP+ ++G++IGK G+ I+ LQ +GA ++ V E + +R ++SGS + V+ A
Sbjct: 322 IFVPRKSIGMIIGKRGETIRDLQYRSGASIRVVPDNEVSVNTVERPIIVSGSLESVELAH 381
Query: 107 ARIEELID 114
I ++++
Sbjct: 382 NLINDIVN 389
>gi|358381022|gb|EHK18698.1| hypothetical protein TRIVIDRAFT_125660, partial [Trichoderma virens
Gv29-8]
Length = 527
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 40/68 (58%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ VP AVG++IGKGG+ I+++QN TG ++ Q R L G+ + + A+
Sbjct: 382 IYVPSDAVGMIIGKGGETIREMQNTTGCKINVAQSSGPGEVQREIALIGTRESIARAKQA 441
Query: 109 IEELIDSV 116
I+E +++V
Sbjct: 442 IDEKVEAV 449
Score = 42.7 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 37/69 (53%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+Q+ VP VG++IG+GG+ I+ LQ +G + V + R L GS + A+
Sbjct: 276 MQIMVPDRTVGLIIGRGGETIRDLQERSGCHINIVGESKSVNGLRPVNLIGSREAAARAK 335
Query: 107 ARIEELIDS 115
I E++DS
Sbjct: 336 DFIMEIVDS 344
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 15/119 (12%)
Query: 6 FQQSRRWQQGIGRNNDNFG---NMREFNENGDG-------RGGMWEVTWEVIQVCVPKAA 55
++ RR QG + ++ R F+ G G RGG + E IQ+ +
Sbjct: 131 YRDDRRGAQGREYRDRSYSPPSRGRTFSPRGAGGRERSPLRGG--DDNSETIQI--ESSL 186
Query: 56 VGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
VG++IG+ G+ +++++ +T RVQF+ + P R+C ++G + E + I +I+
Sbjct: 187 VGLIIGRQGENLRRIEADTNCRVQFLAATDGGPF-RQCKITGPRARRAEVKTAINRIIE 244
>gi|281353987|gb|EFB29571.1| hypothetical protein PANDA_008426 [Ailuropoda melanoleuca]
gi|440901689|gb|ELR52582.1| RNA-binding protein Nova-1, partial [Bos grunniens mutus]
Length = 414
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
+V+++ VP+ VG ++GKGG + + Q TGAR+Q + E P +R+ ++G+P
Sbjct: 329 DVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAAT 388
Query: 103 QEARARIEELI 113
Q A+ I + I
Sbjct: 389 QAAQYLITQRI 399
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
+++ VP + G++IGKGG +K + ++GA VQ Q + + +R +SG P+Q ++A
Sbjct: 81 VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 140
Query: 106 RARIEELIDSVMVEQFSGA 124
+E +I + + SG+
Sbjct: 141 ---VELIIQKIQEDPQSGS 156
>gi|449274746|gb|EMC83824.1| RNA-binding protein Nova-1, partial [Columba livia]
Length = 407
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
+V+++ VP+ VG ++GKGG + + Q TGAR+Q + E P +R+ ++G+P
Sbjct: 322 DVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAAT 381
Query: 103 QEARARIEELI 113
Q A+ I + I
Sbjct: 382 QAAQYLITQRI 392
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
+++ VP + G++IGKGG +K + ++GA VQ Q + + +R +SG P+Q ++A
Sbjct: 80 VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 139
Query: 106 RARIEELIDSVMVEQFSGA 124
+E +I + + SG+
Sbjct: 140 ---VELIIQKIQEDPQSGS 155
>gi|426331515|ref|XP_004026726.1| PREDICTED: LOW QUALITY PROTEIN: tudor and KH domain-containing
protein [Gorilla gorilla gorilla]
Length = 574
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 51/78 (65%), Gaps = 4/78 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+++ VP+ AV ++IG+ G IK+L+ +TGAR+ ED +R ++SG P QV +A+
Sbjct: 18 VEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDT--EDVGDERVLLISGFPVQVCKAK 75
Query: 107 ARIEELI--DSVMVEQFS 122
A I +++ ++++ EQ S
Sbjct: 76 AAIHQILTENTLVSEQLS 93
>gi|341893250|gb|EGT49185.1| hypothetical protein CAEBREN_32371 [Caenorhabditis brenneri]
Length = 430
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
I++ +P AVG +IGKGG+ ++ L+N+ RVQ + E P S+R C++ G + +
Sbjct: 45 IKILIPSNAVGAIIGKGGEAMRNLKNDNNCRVQMSKNSETYPGTSERICLVKGRLNNIMA 104
Query: 105 ARARIEELIDSVMVEQFSGANFDKLRST 132
I++ I +Q FD ++
Sbjct: 105 VIESIQDKIREKCADQAGNDAFDHKNTS 132
>gi|326935103|ref|XP_003213618.1| PREDICTED: UPF0553 protein C9orf64-like, partial [Meleagris
gallopavo]
Length = 400
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 48/82 (58%), Gaps = 11/82 (13%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP---- 88
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ D+P
Sbjct: 39 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-----DEPLEGS 93
Query: 89 SDRRCMLSGSPDQVQEARARIE 110
DR ++G+ DQ+Q A+ ++
Sbjct: 94 EDRIITITGTQDQIQNAQYLLQ 115
>gi|442618212|ref|NP_001262414.1| pasilla, isoform Q [Drosophila melanogaster]
gi|440217246|gb|AGB95796.1| pasilla, isoform Q [Drosophila melanogaster]
Length = 517
Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGS 98
E T+ +++ VP A G +IGKGG+ I LQ +TGARV+ + + P ++R C+++GS
Sbjct: 8 ETTYH-MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGS 66
Query: 99 PDQV 102
+ +
Sbjct: 67 TEAI 70
Score = 43.5 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM 94
+++ VP + G++IGKGG IK+++ E+G+ VQ Q D RC+
Sbjct: 106 VKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPTDVSLQERCI 153
>gi|24645370|ref|NP_731356.1| pasilla, isoform C [Drosophila melanogaster]
gi|11526808|gb|AAG36790.1|AF220423_1 PASILLA splice variant 4 [Drosophila melanogaster]
gi|23170800|gb|AAF54378.2| pasilla, isoform C [Drosophila melanogaster]
Length = 561
Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGS 98
E T+ +++ VP A G +IGKGG+ I LQ +TGARV+ + + P ++R C+++GS
Sbjct: 52 ETTYH-MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGS 110
Query: 99 PDQV 102
+ +
Sbjct: 111 TEAI 114
Score = 43.5 bits (101), Expect = 0.027, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM 94
+++ VP + G++IGKGG IK+++ E+G+ VQ Q D RC+
Sbjct: 150 VKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPTDVSLQERCI 197
>gi|24645368|ref|NP_731355.1| pasilla, isoform D [Drosophila melanogaster]
gi|23170799|gb|AAN13428.1| pasilla, isoform D [Drosophila melanogaster]
Length = 583
Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGS 98
E T+ +++ VP A G +IGKGG+ I LQ +TGARV+ + + P ++R C+++GS
Sbjct: 74 ETTYH-MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGS 132
Query: 99 PDQV 102
+ +
Sbjct: 133 TEAI 136
Score = 43.5 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM 94
+++ VP + G++IGKGG IK+++ E+G+ VQ Q D RC+
Sbjct: 172 VKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPTDVSLQERCI 219
>gi|354474043|ref|XP_003499241.1| PREDICTED: protein bicaudal C homolog 1 [Cricetulus griseus]
Length = 893
Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 59 VIGKGGDMIKKLQNETGARVQFVQMREDDPSDR--RCMLSGSPDQVQEARARIEELIDSV 116
VIGKGG+ IKK+ ETG + F ++ +++ + ++G P V+ ARARI EL+ V
Sbjct: 67 VIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVESARARIRELLPLV 126
Query: 117 MV 118
++
Sbjct: 127 LM 128
>gi|344236151|gb|EGV92254.1| Protein bicaudal C-like 1 [Cricetulus griseus]
Length = 895
Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 59 VIGKGGDMIKKLQNETGARVQFVQMREDDPSDR--RCMLSGSPDQVQEARARIEELIDSV 116
VIGKGG+ IKK+ ETG + F ++ +++ + ++G P V+ ARARI EL+ V
Sbjct: 69 VIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVESARARIRELLPLV 128
Query: 117 MV 118
++
Sbjct: 129 LM 130
>gi|223947885|gb|ACN28026.1| unknown [Zea mays]
gi|224031081|gb|ACN34616.1| unknown [Zea mays]
gi|413921492|gb|AFW61424.1| hypothetical protein ZEAMMB73_181287 [Zea mays]
Length = 706
Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP---SDRRCMLSGSPDQ 101
E ++ VP VG++IGKGGD IK +Q ++GAR+Q + + ++R ++G+ Q
Sbjct: 248 EQFEMTVPDNKVGLIIGKGGDAIKGMQTKSGARIQLIPQHPPEGVTLTERIVRVTGNKKQ 307
Query: 102 VQEARARIEELIDSVMVEQFS 122
++ A+ +LI M + FS
Sbjct: 308 IELAK----DLIKQAMNQTFS 324
Score = 42.0 bits (97), Expect = 0.085, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEARAR 108
VP + VGV+IGK G+ I+ LQ +GA++Q + + D + R L G+ V +A
Sbjct: 160 VPNSRVGVLIGKAGETIRNLQMSSGAKIQITKDADADSNALTRPVELVGTLGSVDKA--- 216
Query: 109 IEELIDSVMVEQFSGAN 125
E LI SV+ E +G +
Sbjct: 217 -ELLIKSVIAEAEAGGS 232
>gi|413921493|gb|AFW61425.1| hypothetical protein ZEAMMB73_181287 [Zea mays]
Length = 699
Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP---SDRRCMLSGSPDQ 101
E ++ VP VG++IGKGGD IK +Q ++GAR+Q + + ++R ++G+ Q
Sbjct: 241 EQFEMTVPDNKVGLIIGKGGDAIKGMQTKSGARIQLIPQHPPEGVTLTERIVRVTGNKKQ 300
Query: 102 VQEARARIEELIDSVMVEQFS 122
++ A+ +LI M + FS
Sbjct: 301 IELAK----DLIKQAMNQTFS 317
Score = 42.0 bits (97), Expect = 0.087, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEARAR 108
VP + VGV+IGK G+ I+ LQ +GA++Q + + D + R L G+ V +A
Sbjct: 153 VPNSRVGVLIGKAGETIRNLQMSSGAKIQITKDADADSNALTRPVELVGTLGSVDKA--- 209
Query: 109 IEELIDSVMVEQFSGAN 125
E LI SV+ E +G +
Sbjct: 210 -ELLIKSVIAEAEAGGS 225
>gi|325191228|emb|CCA26015.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 534
Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 54/103 (52%), Gaps = 12/103 (11%)
Query: 14 QGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNE 73
+G G + + FG+ + +G + Q+ VP+ VG +IG+GG+ I+ LQ
Sbjct: 147 KGAGVDGNEFGHYGPGSADGS----------QAYQMPVPRTYVGYIIGRGGETIRDLQAR 196
Query: 74 TGARVQFVQMREDDP--SDRRCMLSGSPDQVQEARARIEELID 114
+GA +Q V+ E DR ++G+ + V+ A+ I+ L+D
Sbjct: 197 SGAHIQIVREEEGAAFTPDRFVSIAGTEEAVESAKKLIQNLLD 239
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 43 TWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRE--DDPSDRRCMLSGSPD 100
T I + VP VGVVIGK G+ IK +Q+ RVQ Q+ + +P R + G+P+
Sbjct: 337 TGSTIYMQVPNDRVGVVIGKKGETIKGIQDRNTVRVQIPQVPDVGSNPPVRTISIHGAPE 396
Query: 101 QVQEARARIEELIDSVMVEQFSGANFDK 128
+Q A+ E IDSV+++ +D+
Sbjct: 397 SLQRAK----EEIDSVILQGAGQTGYDQ 420
Score = 38.5 bits (88), Expect = 0.80, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRE-DDPSDRRCMLSGSPDQVQ 103
E +++ VP VG+VIG+GG I+ +Q TG + Q + +P+ R+ + G+ +
Sbjct: 262 ETLEILVPNDRVGLVIGRGGATIRSIQVRTGTNITVPQTPDATNPTMRKITVKGTMEAKD 321
Query: 104 EARARIEELI 113
A+ I LI
Sbjct: 322 AAKNEILGLI 331
>gi|303311415|ref|XP_003065719.1| KH domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240105381|gb|EER23574.1| KH domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
Length = 508
Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEAR 106
+ +PK +VG++IGKGGD IK+LQN TG +V + RE DR ++ GS +++ +
Sbjct: 350 IFIPKESVGMIIGKGGDTIKELQNITGCKVNILPAVGRE---VDREVVMIGSKQAIEQMK 406
Query: 107 ARIEELIDS 115
I E +D+
Sbjct: 407 KSILEKVDT 415
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Query: 36 RGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCML 95
RGG + + E I + VG++IG+ GD +++++++TG R+QF+ E + + R C +
Sbjct: 134 RGGGMDDSTETINI--DSKLVGLIIGRQGDNLRRIESDTGTRIQFLDSPESNVNIRPCRI 191
Query: 96 SGSPDQVQEARARIEELIDSVMVEQFSGANFDKLRS 131
SG+ +A+A I +I + + A+ D+ S
Sbjct: 192 SGTRAARSDAKAEIFRMISENNAARGAMASADRFAS 227
Score = 43.5 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 39/68 (57%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
Q+ VP VG++IG+GG+ IK LQ+ +G V + R L+G+P +Q A+
Sbjct: 249 QMMVPDRTVGLIIGRGGETIKDLQDRSGCHVIIAPEDKSLNGLRPVNLNGAPRAIQRAKD 308
Query: 108 RIEELIDS 115
I E++++
Sbjct: 309 LILEVVET 316
>gi|156102214|ref|XP_001616800.1| RNA-binding protein Nova-1 [Plasmodium vivax Sal-1]
gi|148805674|gb|EDL47073.1| RNA-binding protein Nova-1, putative [Plasmodium vivax]
Length = 335
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ VPK+AV +IGKGG IK+LQ+ TGA++Q + RED ++R + G + + + +
Sbjct: 112 IVVPKSAVSAIIGKGGQQIKQLQDTTGAKIQ-ISSREDGLNERIISIIGPFESISDTAIK 170
Query: 109 IEELI 113
+ I
Sbjct: 171 VTNSI 175
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
I + +P +G VIGK G + + N TGA+++ + E P +DR+ + G+ V
Sbjct: 251 ISIQIPDEFIGSVIGKNGARLTNIMNSTGAQIRISRKGELVPGTADRKVRIMGTVAAVHA 310
Query: 105 ARARIEELIDSVMVE 119
A + + ++SV ++
Sbjct: 311 AHVLLLQRLESVYMQ 325
>gi|161078120|ref|NP_001036697.1| pasilla, isoform J [Drosophila melanogaster]
gi|19527741|gb|AAL89985.1| AT03366p [Drosophila melanogaster]
gi|113194765|gb|ABI31154.1| pasilla, isoform J [Drosophila melanogaster]
Length = 539
Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGS 98
E T+ +++ VP A G +IGKGG+ I LQ +TGARV+ + + P ++R C+++GS
Sbjct: 30 ETTYH-MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGS 88
Query: 99 PDQV 102
+ +
Sbjct: 89 TEAI 92
Score = 43.5 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM 94
+++ VP + G++IGKGG IK+++ E+G+ VQ Q D RC+
Sbjct: 128 VKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPTDVSLQERCI 175
>gi|301768703|ref|XP_002919770.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Ailuropoda
melanoleuca]
Length = 517
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
+V+++ VP+ VG ++GKGG + + Q TGAR+Q + E P +R+ ++G+P
Sbjct: 432 DVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAAT 491
Query: 103 QEARARIEELI 113
Q A+ I + I
Sbjct: 492 QAAQYLITQRI 502
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 62 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNA 121
Query: 105 ARARIEELI 113
I E I
Sbjct: 122 VHGFIAEKI 130
Score = 44.7 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
+++ VP + G++IGKGG +K + ++GA VQ Q + + +R +SG P+Q ++A
Sbjct: 184 VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 243
Query: 106 RARIEELIDSVMVEQFSGA 124
+E +I + + SG+
Sbjct: 244 ---VELIIQKIQEDPQSGS 259
>gi|356576359|ref|XP_003556300.1| PREDICTED: RNA-binding protein Nova-1-like [Glycine max]
Length = 337
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 5/78 (6%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
I+ V +A G VIGKGG I Q+++GAR+Q + E P +DR M+SG+ +++Q
Sbjct: 38 IRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGAINEIQR 97
Query: 105 ARARIEELIDSVMVEQFS 122
A +E ++ ++ E S
Sbjct: 98 A---VELILSKLLSELHS 112
>gi|395503649|ref|XP_003756176.1| PREDICTED: RNA-binding protein Nova-1-like [Sarcophilus harrisii]
Length = 488
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
+V+++ VP+ VG ++GKGG + + Q TGAR+Q + E P +R+ ++G+P
Sbjct: 403 DVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAAT 462
Query: 103 QEARARIEELI 113
Q A+ I + I
Sbjct: 463 QAAQYLITQRI 473
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 33 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNA 92
Query: 105 ARARIEELI 113
I E I
Sbjct: 93 VHGFIAEKI 101
Score = 44.7 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
+++ VP + G++IGKGG +K + ++GA VQ Q + + +R +SG P+Q ++A
Sbjct: 155 VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 214
Query: 106 RARIEELIDSVMVEQFSGA 124
+E +I + + SG+
Sbjct: 215 ---VELIIQKIQEDPQSGS 230
>gi|403302830|ref|XP_003942054.1| PREDICTED: LOW QUALITY PROTEIN: tudor and KH domain-containing
protein [Saimiri boliviensis boliviensis]
Length = 633
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I++ VP+ AV ++IG+ G IK+L+ +TGAR+ ED +R ++SG P QV +A+
Sbjct: 55 IEMRVPQDAVKLIIGRQGANIKQLRKQTGARIDVDT--EDVGDERVLLISGFPVQVCKAK 112
Query: 107 ARIEELI--DSVMVEQFS 122
A I +++ ++ + EQ S
Sbjct: 113 AAIHQILTENTPVSEQLS 130
>gi|4838357|gb|AAD30971.1|AF119121_1 putative RNA binding protein [Homo sapiens]
Length = 606
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I++ VP+ AV ++IG+ G IK+L+ +TGAR+ ED +R ++SG P QV +A+
Sbjct: 55 IEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDT--EDVGDERVLLISGFPVQVCKAK 112
Query: 107 ARIEELI--DSVMVEQFS 122
A I +++ ++ + EQ S
Sbjct: 113 AAIHQILTENTPVSEQLS 130
>gi|345309017|ref|XP_001516066.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Ornithorhynchus anatinus]
Length = 679
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 37/65 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
EV+ + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 506 EVVNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAEGPDASERMVIITGPPEAQFK 565
Query: 105 ARARI 109
A+ RI
Sbjct: 566 AQGRI 570
Score = 35.0 bits (79), Expect = 9.6, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 13/59 (22%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARI 109
VP +A G VIGKGG + +LQN T A V P D+ +PD+ +E +I
Sbjct: 594 VPSSAAGRVIGKGGKTVNELQNLTSAEVIV-------PRDQ------TPDENEEVIVKI 639
>gi|357602329|gb|EHJ63352.1| hypothetical protein KGM_14186 [Danaus plexippus]
Length = 546
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGS 98
+V VP G +IGKGG+ I +LQ +TGARV+ + + P ++R C+++GS
Sbjct: 69 KVLVPSMVAGAIIGKGGETIAQLQKDTGARVKMSKSHDFYPGTTERACLITGS 121
Score = 42.7 bits (99), Expect = 0.045, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 32/48 (66%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM 94
+++ VP + G++IGKGG+ IK+++ ++G+ VQ Q ++ RC+
Sbjct: 162 VKILVPNSTAGMIIGKGGNYIKQIKEQSGSYVQISQKAKELSLQERCI 209
>gi|296085941|emb|CBI31382.3| unnamed protein product [Vitis vinifera]
Length = 357
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 39 MWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLS 96
M + T+ I+ V AA G VIGKGG I Q+++GAR+Q + E P SDR M+S
Sbjct: 78 MEKSTY--IRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTSDRIIMIS 135
Query: 97 GSPDQVQEA 105
G+ +++ +A
Sbjct: 136 GATNEIIKA 144
>gi|326519350|dbj|BAJ96674.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 683
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 12/92 (13%)
Query: 33 GDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRE---DDPS 89
G G+ G E ++ VP VG++IGKGG+ IK LQ +GAR+Q + +
Sbjct: 238 GSGQSGS-----EQFEMLVPDNKVGLIIGKGGETIKNLQTRSGARIQLIPQHPPAGTTLT 292
Query: 90 DRRCMLSGSPDQVQEARARIEELIDSVMVEQF 121
+R ++G+ Q++ A+ ELI M + F
Sbjct: 293 ERTVRVTGNKKQIEAAK----ELIKQAMSQTF 320
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 9/97 (9%)
Query: 31 ENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRE--DDP 88
+ GD G + E T + VP VGV+IGK G+ I+ LQ +GA++Q + + D
Sbjct: 140 QEGDATGALQETTR---LIDVPNTKVGVLIGKAGETIRNLQMSSGAKIQITKDADVSSDA 196
Query: 89 SDRRCMLSGSPDQVQEARARIEELIDSVMVEQFSGAN 125
R L G+ + + +A E+LI SV+ E +G +
Sbjct: 197 MTRPVELVGTVESIDKA----EQLIKSVIAEAEAGGS 229
>gi|324500292|gb|ADY40143.1| Far upstream element-binding protein 1 [Ascaris suum]
gi|324519726|gb|ADY47462.1| Far upstream element-binding protein 1, partial [Ascaris suum]
Length = 363
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Query: 30 NENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS 89
N++G G G E+ + VP G+VIGKGG+ IK++ E+GA V+ + + S
Sbjct: 57 NKSGAGSGA------EIFYMHVPANKTGLVIGKGGETIKQICAESGAHVELSRDPPPNSS 110
Query: 90 DRRCMLSGSPDQVQEARARI 109
++ ++ G+P Q+ A+ I
Sbjct: 111 EKVFIIKGTPYQIHHAQHII 130
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 58 VVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELIDSVM 117
++IGKGG+ IK+L E+GA++QF + DR ++ G+ +Q+ +A I EL++
Sbjct: 1 MIIGKGGETIKRLAAESGAKIQFKPDEDQTTPDRCAVIQGTTEQIAKATQFISELVN--- 57
Query: 118 VEQFSGANFDKLRSTVLANRS 138
+ +G+ + V AN++
Sbjct: 58 -KSGAGSGAEIFYMHVPANKT 77
>gi|403264854|ref|XP_003924682.1| PREDICTED: RNA-binding protein Nova-1 [Saimiri boliviensis
boliviensis]
Length = 595
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
+V+++ VP+ VG ++GKGG + + Q TGAR+Q + E P +R+ ++G+P
Sbjct: 510 DVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAAT 569
Query: 103 QEARARIEELI 113
Q A+ I + I
Sbjct: 570 QAAQYLITQRI 580
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 140 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNA 199
Query: 105 ARARIEELI 113
I E I
Sbjct: 200 VHGFIAEKI 208
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
+++ VP + G++IGKGG +K + ++GA VQ Q + + +R +SG P+Q ++A
Sbjct: 262 VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 321
Query: 106 RARIEELIDSVMVEQFSGA 124
+E +I + + SG+
Sbjct: 322 ---VELIIQKIQEDPQSGS 337
>gi|320039582|gb|EFW21516.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 558
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEAR 106
+ +PK +VG++IGKGGD IK+LQN TG +V + RE DR ++ GS +++ +
Sbjct: 400 IFIPKESVGMIIGKGGDTIKELQNITGCKVNILPAVGRE---VDREVVMIGSKQAIEQMK 456
Query: 107 ARIEELIDS 115
I E +D+
Sbjct: 457 KSILEKVDT 465
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Query: 36 RGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCML 95
RGG + + E I + VG++IG+ GD +++++++TG R+QF+ E + + R C +
Sbjct: 184 RGGGMDDSTETINID--SKLVGLIIGRQGDNLRRIESDTGTRIQFLDSPESNVNIRPCRI 241
Query: 96 SGSPDQVQEARARIEELIDSVMVEQFSGANFDKLRS 131
SG+ +A+A I +I + + A+ D+ S
Sbjct: 242 SGTRAARSDAKAEIFRMISENNAARGAMASADRFAS 277
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%)
Query: 38 GMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSG 97
G E Q+ VP VG++IG+GG+ IK LQ+ +G V + R L+G
Sbjct: 289 GYGEDENSSTQMMVPDRTVGLIIGRGGETIKDLQDRSGCHVIIAPEDKSLNGLRPVNLNG 348
Query: 98 SPDQVQEARARIEELIDS 115
+P +Q A+ I E++++
Sbjct: 349 APRAIQRAKDLILEVVET 366
>gi|148674927|gb|EDL06874.1| mCG121849, isoform CRA_e [Mus musculus]
Length = 266
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E D+
Sbjct: 173 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDQI 231
Query: 93 CMLSGSPDQVQEARARIEELIDSVMVEQF 121
++G+ DQ+Q A+ ++ ++V + F
Sbjct: 232 ITITGTQDQIQNAQYLLQNSCEAVFWKVF 260
>gi|125559909|gb|EAZ05357.1| hypothetical protein OsI_27561 [Oryza sativa Indica Group]
gi|125601956|gb|EAZ41281.1| hypothetical protein OsJ_25788 [Oryza sativa Japonica Group]
Length = 700
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 12/93 (12%)
Query: 33 GDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP---S 89
G G+ G E ++ VP VG++IGKGG+ IK LQ +GAR+Q + + +
Sbjct: 239 GSGQSGS-----EQFEMLVPDNKVGLIIGKGGETIKTLQTRSGARIQLIPQHPPEGVTLT 293
Query: 90 DRRCMLSGSPDQVQEARARIEELIDSVMVEQFS 122
+R ++G+ Q++ A+ ++I M + FS
Sbjct: 294 ERTVRITGNKKQIEAAK----DMIKQAMSQTFS 322
Score = 42.7 bits (99), Expect = 0.054, Method: Composition-based stats.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 8/94 (8%)
Query: 34 DGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DR 91
+G G + T +I V P VGV+IGK G+ I+ LQ +GA++Q + E D + R
Sbjct: 143 EGGGAPGQETSRIINV--PNNKVGVLIGKSGETIRNLQMNSGAKIQITKDAEADANAPTR 200
Query: 92 RCMLSGSPDQVQEARARIEELIDSVMVEQFSGAN 125
L G+ + + +A E LI +V+ E +G +
Sbjct: 201 SVELVGTLESIDKA----ERLIKNVIAEADAGGS 230
>gi|119194253|ref|XP_001247730.1| hypothetical protein CIMG_01501 [Coccidioides immitis RS]
gi|392863028|gb|EAS36276.2| hypothetical protein CIMG_01501 [Coccidioides immitis RS]
Length = 558
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEAR 106
+ +PK +VG++IGKGGD IK+LQN TG +V + RE DR ++ GS +++ +
Sbjct: 400 IFIPKESVGMIIGKGGDTIKELQNITGCKVNILPAVGRE---VDREVVMIGSKQAIEQMK 456
Query: 107 ARIEELIDS 115
I E +D+
Sbjct: 457 KSILEKVDT 465
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Query: 36 RGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCML 95
RGG + + E I + VG++IG+ GD +++++++TG R+QF+ E + + R C +
Sbjct: 184 RGGGMDDSTETINID--SKLVGLIIGRQGDNLRRIESDTGTRIQFLDSPESNVNIRPCRI 241
Query: 96 SGSPDQVQEARARIEELIDSVMVEQFSGANFDKLRS 131
SG+ +A+A I +I + + A+ D+ S
Sbjct: 242 SGTRAARSDAKAEIFRMISENNAARGAMASADRFAS 277
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%)
Query: 38 GMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSG 97
G E Q+ VP VG++IG+GG+ IK LQ+ +G V + R L+G
Sbjct: 289 GYGEDENSSTQMMVPDRTVGLIIGRGGETIKDLQDRSGCHVIIAPEDKSLNGLRPVNLNG 348
Query: 98 SPDQVQEARARIEELIDS 115
+P +Q A+ I E++++
Sbjct: 349 APRAIQRAKDLILEVVET 366
>gi|390177068|ref|XP_003736271.1| GA30025, isoform E [Drosophila pseudoobscura pseudoobscura]
gi|388858895|gb|EIM52344.1| GA30025, isoform E [Drosophila pseudoobscura pseudoobscura]
Length = 548
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGS 98
E T+ +++ VP A G +IGKGG+ I LQ +TGARV+ + + P ++R C+++GS
Sbjct: 41 ETTYH-MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGS 99
Query: 99 PDQV 102
+ +
Sbjct: 100 TEAI 103
Score = 42.7 bits (99), Expect = 0.051, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 31/48 (64%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM 94
+++ VP + G++IGKGG IK+++ ++G+ VQ Q +D RC+
Sbjct: 139 VKILVPNSTAGMIIGKGGAFIKQIKEDSGSYVQISQKPKDVSLQERCI 186
>gi|359486525|ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [Vitis vinifera]
Length = 309
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 4/69 (5%)
Query: 39 MWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLS 96
M + T+ I+ V AA G VIGKGG I Q+++GAR+Q + E P SDR M+S
Sbjct: 30 MEKSTY--IRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTSDRIIMIS 87
Query: 97 GSPDQVQEA 105
G+ +++ +A
Sbjct: 88 GATNEIIKA 96
>gi|161078122|ref|NP_001036695.1| pasilla, isoform K [Drosophila melanogaster]
gi|320542560|ref|NP_001189201.1| pasilla, isoform P [Drosophila melanogaster]
gi|320542562|ref|NP_001189202.1| pasilla, isoform M [Drosophila melanogaster]
gi|113194763|gb|ABI31152.1| pasilla, isoform K [Drosophila melanogaster]
gi|318068745|gb|ADV37292.1| pasilla, isoform P [Drosophila melanogaster]
gi|318068746|gb|ADV37293.1| pasilla, isoform M [Drosophila melanogaster]
Length = 550
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGS 98
E T+ +++ VP A G +IGKGG+ I LQ +TGARV+ + + P ++R C+++GS
Sbjct: 41 ETTYH-MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGS 99
Query: 99 PDQV 102
+ +
Sbjct: 100 TEAI 103
Score = 43.5 bits (101), Expect = 0.031, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM 94
+++ VP + G++IGKGG IK+++ E+G+ VQ Q D RC+
Sbjct: 139 VKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPTDVSLQERCI 186
>gi|7109258|gb|AAF36701.1|AF227192_1 tudor and KH domain-containing protein [Homo sapiens]
Length = 561
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I++ VP+ AV ++IG+ G IK+L+ +TGAR+ ED +R ++SG P QV +A+
Sbjct: 55 IEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDT--EDVGDERVLLISGFPVQVCKAK 112
Query: 107 ARIEELI--DSVMVEQFS 122
A I +++ ++ + EQ S
Sbjct: 113 AAIHQILTENTPVSEQLS 130
>gi|194381224|dbj|BAG64180.1| unnamed protein product [Homo sapiens]
Length = 561
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I++ VP+ AV ++IG+ G IK+L+ +TGAR+ ED +R ++SG P QV +A+
Sbjct: 55 IEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDT--EDVGDERVLLISGFPVQVCKAK 112
Query: 107 ARIEELI--DSVMVEQFS 122
A I +++ ++ + EQ S
Sbjct: 113 AAIHQILTENTPVSEQLS 130
>gi|161078112|ref|NP_001036692.1| pasilla, isoform F [Drosophila melanogaster]
gi|164449760|ref|NP_731351.3| pasilla, isoform H [Drosophila melanogaster]
gi|164449762|ref|NP_731352.3| pasilla, isoform G [Drosophila melanogaster]
gi|320542556|ref|NP_001189199.1| pasilla, isoform N [Drosophila melanogaster]
gi|320542564|ref|NP_001189203.1| pasilla, isoform O [Drosophila melanogaster]
gi|11526806|gb|AAG36789.1|AF220422_1 PASILLA splice variant 3 [Drosophila melanogaster]
gi|158030195|gb|AAF54377.3| pasilla, isoform F [Drosophila melanogaster]
gi|158030196|gb|AAN13425.2| pasilla, isoform G [Drosophila melanogaster]
gi|158030197|gb|AAN13424.2| pasilla, isoform H [Drosophila melanogaster]
gi|318068743|gb|ADV37290.1| pasilla, isoform N [Drosophila melanogaster]
gi|318068747|gb|ADV37294.1| pasilla, isoform O [Drosophila melanogaster]
Length = 572
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGS 98
E T+ +++ VP A G +IGKGG+ I LQ +TGARV+ + + P ++R C+++GS
Sbjct: 63 ETTYH-MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGS 121
Query: 99 PDQV 102
+ +
Sbjct: 122 TEAI 125
Score = 43.1 bits (100), Expect = 0.032, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM 94
+++ VP + G++IGKGG IK+++ E+G+ VQ Q D RC+
Sbjct: 161 VKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPTDVSLQERCI 208
>gi|360045566|emb|CCD83114.1| rna-binding protein related [Schistosoma mansoni]
Length = 820
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 30 NENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM-REDDP 88
N N G G + + +++ VP + G+VIGKGG I++++ +TGA VQ Q RE +
Sbjct: 47 NPNTTGEGRLNVERHKQVKILVPNSTAGMVIGKGGSYIQEIKEKTGAYVQISQKSREFNL 106
Query: 89 SDRRCMLSGSPDQVQEA 105
+R +++G DQ + A
Sbjct: 107 LERCIVVAGELDQTRSA 123
>gi|327259393|ref|XP_003214522.1| PREDICTED: RNA-binding protein Nova-1-like [Anolis carolinensis]
Length = 508
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
+V+++ VP+ VG ++GKGG + + Q TGAR+Q + E P +R+ ++G+P
Sbjct: 423 DVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAAT 482
Query: 103 QEARARIEELI 113
Q A+ I + I
Sbjct: 483 QAAQYLITQRI 493
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 53 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNA 112
Query: 105 ARARIEELI 113
I E I
Sbjct: 113 VHGFIAEKI 121
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
+++ VP + G++IGKGG +K + ++GA VQ Q + + +R +SG P+Q ++A
Sbjct: 175 VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 234
Query: 106 RARIEELIDSVMVEQFSGA 124
+E +I + + SG+
Sbjct: 235 ---VELIIQKIQEDPQSGS 250
>gi|256085349|ref|XP_002578884.1| rna-binding protein related [Schistosoma mansoni]
Length = 821
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 30 NENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM-REDDP 88
N N G G + + +++ VP + G+VIGKGG I++++ +TGA VQ Q RE +
Sbjct: 47 NPNTTGEGRLNVERHKQVKILVPNSTAGMVIGKGGSYIQEIKEKTGAYVQISQKSREFNL 106
Query: 89 SDRRCMLSGSPDQVQEA 105
+R +++G DQ + A
Sbjct: 107 LERCIVVAGELDQTRSA 123
>gi|125773159|ref|XP_001357838.1| GA30025, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|54637571|gb|EAL26973.1| GA30025, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 570
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGS 98
E T+ +++ VP A G +IGKGG+ I LQ +TGARV+ + + P ++R C+++GS
Sbjct: 63 ETTYH-MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGS 121
Query: 99 PDQV 102
+ +
Sbjct: 122 TEAI 125
Score = 42.7 bits (99), Expect = 0.054, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 31/48 (64%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM 94
+++ VP + G++IGKGG IK+++ ++G+ VQ Q +D RC+
Sbjct: 161 VKILVPNSTAGMIIGKGGAFIKQIKEDSGSYVQISQKPKDVSLQERCI 208
>gi|354501840|ref|XP_003512996.1| PREDICTED: tudor and KH domain-containing protein [Cricetulus
griseus]
Length = 556
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I++ VP+ AV ++IG+ G IK+L+ +TGAR+ ED +R ++SG P QV +A+
Sbjct: 52 IEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDT--EDVGDERVLLISGFPVQVCKAK 109
Query: 107 ARIEELI--DSVMVEQFS 122
A I +++ ++ + EQ S
Sbjct: 110 AAIHQILTENTPVFEQLS 127
>gi|194903195|ref|XP_001980824.1| GG16798 [Drosophila erecta]
gi|190652527|gb|EDV49782.1| GG16798 [Drosophila erecta]
Length = 572
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGS 98
E T+ +++ VP A G +IGKGG+ I LQ +TGARV+ + + P ++R C+++GS
Sbjct: 63 ETTYH-MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGS 121
Query: 99 PDQV 102
+ +
Sbjct: 122 TEAI 125
Score = 43.9 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 31/48 (64%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM 94
+++ VP + G++IGKGG IK+++ E+G+ VQ Q +D RC+
Sbjct: 161 VKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPKDVSLQERCI 208
>gi|291084699|ref|NP_001014060.2| tudor and KH domain containing [Rattus norvegicus]
gi|149030752|gb|EDL85789.1| rCG51933, isoform CRA_a [Rattus norvegicus]
Length = 560
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I++ VP+ AV ++IG+ G IK+L+ +TGAR+ ED +R ++SG P QV +A+
Sbjct: 55 IEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDT--EDVGDERVLLISGFPVQVCKAK 112
Query: 107 ARIEELI--DSVMVEQFS 122
A I +++ ++ + EQ S
Sbjct: 113 AAIHQILTENTPVFEQLS 130
>gi|110625942|ref|NP_082583.1| tudor and KH domain-containing protein [Mus musculus]
gi|46396815|sp|Q80VL1.1|TDRKH_MOUSE RecName: Full=Tudor and KH domain-containing protein
gi|29387121|gb|AAH49363.1| Tudor and KH domain containing protein [Mus musculus]
gi|148706783|gb|EDL38730.1| mCG5013, isoform CRA_c [Mus musculus]
Length = 560
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I++ VP+ AV ++IG+ G IK+L+ +TGAR+ ED +R ++SG P QV +A+
Sbjct: 55 IEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDT--EDVGDERVLLISGFPVQVCKAK 112
Query: 107 ARIEELI--DSVMVEQFS 122
A I +++ ++ + EQ S
Sbjct: 113 AAIHQILTENTPVFEQLS 130
>gi|123979838|gb|ABM81748.1| tudor and KH domain containing [synthetic construct]
gi|124000485|gb|ABM87751.1| tudor and KH domain containing [synthetic construct]
Length = 561
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I++ VP+ AV ++IG+ G IK+L+ +TGAR+ ED +R ++SG P QV +A+
Sbjct: 55 IEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDT--EDVGDERVLLISGFPVQVCKAK 112
Query: 107 ARIEELI--DSVMVEQFS 122
A I +++ ++ + EQ S
Sbjct: 113 AAIHQILTENTPVSEQLS 130
>gi|301768705|ref|XP_002919771.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Ailuropoda
melanoleuca]
Length = 493
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
+V+++ VP+ VG ++GKGG + + Q TGAR+Q + E P +R+ ++G+P
Sbjct: 408 DVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAAT 467
Query: 103 QEARARIEELI 113
Q A+ I + I
Sbjct: 468 QAAQYLITQRI 478
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 62 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNA 121
Query: 105 ARARIEELI 113
I E I
Sbjct: 122 VHGFIAEKI 130
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
+++ VP + G++IGKGG +K + ++GA VQ Q + + +R +SG P+Q ++A
Sbjct: 160 VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 219
Query: 106 RARIEELIDSVMVEQFSGA 124
+E +I + + SG+
Sbjct: 220 ---VELIIQKIQEDPQSGS 235
>gi|444728868|gb|ELW69310.1| RNA-binding protein Nova-1 [Tupaia chinensis]
Length = 482
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
+V+++ VP+ VG ++GKGG + + Q TGAR+Q + E P +R+ ++G+P
Sbjct: 397 DVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAAT 456
Query: 103 QEARARIEELI 113
Q A+ I + I
Sbjct: 457 QAAQYLITQRI 467
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 26 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNA 85
Query: 105 ARARIEELI 113
I E I
Sbjct: 86 VHGFIAEKI 94
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
+++ VP + G++IGKGG +K + ++GA VQ Q + + +R +SG P+Q ++A
Sbjct: 148 VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 207
Query: 106 RARIEELIDSVMVEQFSGA 124
+E +I + + SG+
Sbjct: 208 ---VELIIQKIQEDPQSGS 223
>gi|34784958|gb|AAH57030.1| Tdrkh protein [Mus musculus]
Length = 560
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I++ VP+ AV ++IG+ G IK+L+ +TGAR+ ED +R ++SG P QV +A+
Sbjct: 55 IEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDT--EDVGDERVLLISGFPVQVCKAK 112
Query: 107 ARIEELI--DSVMVEQFS 122
A I +++ ++ + EQ S
Sbjct: 113 AAIHQILTENTPVFEQLS 130
>gi|356535513|ref|XP_003536289.1| PREDICTED: RNA-binding protein Nova-1-like [Glycine max]
Length = 337
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 46/78 (58%), Gaps = 5/78 (6%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
I+ V +A G VIGKGG I Q+++GAR+Q + E P +DR M+SG+ +++Q
Sbjct: 38 IRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGAINEIQR 97
Query: 105 ARARIEELIDSVMVEQFS 122
A +E ++ ++ E S
Sbjct: 98 A---VELILSKLLSELHS 112
>gi|397475477|ref|XP_003809165.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Pan paniscus]
Length = 470
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
+V+++ VP+ VG ++GKGG + + Q TGAR+Q + E P +R+ ++G+P
Sbjct: 385 DVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAAT 444
Query: 103 QEARARIEELI 113
Q A+ I + I
Sbjct: 445 QAAQYLITQRI 455
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 15 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNA 74
Query: 105 ARARIEELI 113
I E I
Sbjct: 75 VHGFIAEKI 83
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
+++ VP + G++IGKGG +K + ++GA VQ Q + + +R +SG P+Q ++A
Sbjct: 137 VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 196
Query: 106 RARIEELIDSVMVEQFSGA 124
+E +I + + SG+
Sbjct: 197 ---VELIIQKIQEDPQSGS 212
>gi|326920695|ref|XP_003206604.1| PREDICTED: RNA-binding protein Nova-1-like [Meleagris gallopavo]
Length = 520
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
+V+++ VP+ VG ++GKGG + + Q TGAR+Q + E P +R+ ++G+P
Sbjct: 435 DVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAAT 494
Query: 103 QEARARIEELI 113
Q A+ I + I
Sbjct: 495 QAAQYLITQRI 505
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 65 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNA 124
Query: 105 ARARIEELI 113
I E I
Sbjct: 125 VHGFIAEKI 133
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
+++ VP + G++IGKGG +K + ++GA VQ Q + + +R +SG P+Q ++A
Sbjct: 187 VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 246
Query: 106 RARIEELIDSVMVEQFSGA 124
+E +I + + SG+
Sbjct: 247 ---VELIIQKIQEDPQSGS 262
>gi|195330414|ref|XP_002031899.1| GM23807 [Drosophila sechellia]
gi|194120842|gb|EDW42885.1| GM23807 [Drosophila sechellia]
Length = 572
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQV 102
+++ VP A G +IGKGG+ I LQ +TGARV+ + + P ++R C+++GS + +
Sbjct: 68 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAI 125
Score = 43.9 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 31/48 (64%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM 94
+++ VP + G++IGKGG IK+++ E+G+ VQ Q +D RC+
Sbjct: 161 VKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPKDVSLQERCI 208
>gi|392353290|ref|XP_003751453.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Rattus
norvegicus]
Length = 463
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 16/104 (15%)
Query: 29 FNENGDGRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED 86
++ GRG ++ +I QV +PK G +IGKGG IK++++E+GA + + D
Sbjct: 370 YDSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASI-----KTD 424
Query: 87 DP----SDRRCMLSGSPDQVQEARARIEELIDSVMVEQFSGANF 126
+P DR ++G+ DQ+Q + ++ V+Q+SG F
Sbjct: 425 EPLEGSEDRIITITGTQDQIQNTQYLLQN-----SVKQYSGKFF 463
>gi|195499424|ref|XP_002096942.1| GE25952 [Drosophila yakuba]
gi|194183043|gb|EDW96654.1| GE25952 [Drosophila yakuba]
Length = 572
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 3/64 (4%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGS 98
E T+ +++ VP A G +IGKGG+ I LQ +TGARV+ + + P ++R C+++GS
Sbjct: 63 ETTYH-MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGS 121
Query: 99 PDQV 102
+ +
Sbjct: 122 TEAI 125
Score = 43.9 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 31/48 (64%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM 94
+++ VP + G++IGKGG IK+++ E+G+ VQ Q +D RC+
Sbjct: 161 VKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPKDVSLQERCI 208
>gi|402856150|ref|XP_003892660.1| PREDICTED: tudor and KH domain-containing protein isoform 1 [Papio
anubis]
gi|402856152|ref|XP_003892661.1| PREDICTED: tudor and KH domain-containing protein isoform 2 [Papio
anubis]
gi|402856154|ref|XP_003892662.1| PREDICTED: tudor and KH domain-containing protein isoform 3 [Papio
anubis]
Length = 561
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I++ VP+ AV ++IG+ G IK+L+ +TGAR+ ED +R ++SG P QV +A+
Sbjct: 55 IEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDT--EDVGDERVLLISGFPVQVCKAK 112
Query: 107 ARIEELI--DSVMVEQFS 122
A I +++ ++ + EQ S
Sbjct: 113 AAIHQILTENTPVSEQLS 130
>gi|384942016|gb|AFI34613.1| tudor and KH domain-containing protein isoform a [Macaca mulatta]
Length = 561
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I++ VP+ AV ++IG+ G IK+L+ +TGAR+ ED +R ++SG P QV +A+
Sbjct: 55 IEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDT--EDVGDERVLLISGFPVQVCKAK 112
Query: 107 ARIEELI--DSVMVEQFS 122
A I +++ ++ + EQ S
Sbjct: 113 AAIHQILTENTPVSEQLS 130
>gi|355558430|gb|EHH15210.1| hypothetical protein EGK_01270 [Macaca mulatta]
gi|355745651|gb|EHH50276.1| hypothetical protein EGM_01082 [Macaca fascicularis]
gi|380786099|gb|AFE64925.1| tudor and KH domain-containing protein isoform a [Macaca mulatta]
gi|383413547|gb|AFH29987.1| tudor and KH domain-containing protein isoform a [Macaca mulatta]
Length = 561
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I++ VP+ AV ++IG+ G IK+L+ +TGAR+ ED +R ++SG P QV +A+
Sbjct: 55 IEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDT--EDVGDERVLLISGFPVQVCKAK 112
Query: 107 ARIEELI--DSVMVEQFS 122
A I +++ ++ + EQ S
Sbjct: 113 AAIHQILTENTPVSEQLS 130
>gi|297663599|ref|XP_002810257.1| PREDICTED: tudor and KH domain-containing protein isoform 2 [Pongo
abelii]
gi|297663601|ref|XP_002810258.1| PREDICTED: tudor and KH domain-containing protein isoform 3 [Pongo
abelii]
gi|395729841|ref|XP_003775622.1| PREDICTED: tudor and KH domain-containing protein [Pongo abelii]
Length = 561
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I++ VP+ AV ++IG+ G IK+L+ +TGAR+ ED +R ++SG P QV +A+
Sbjct: 55 IEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDT--EDVGDERVLLISGFPVQVCKAK 112
Query: 107 ARIEELI--DSVMVEQFS 122
A I +++ ++ + EQ S
Sbjct: 113 AAIHQILTENTPVSEQLS 130
>gi|145312256|ref|NP_006853.2| tudor and KH domain-containing protein isoform a [Homo sapiens]
gi|145312259|ref|NP_001077434.1| tudor and KH domain-containing protein isoform a [Homo sapiens]
gi|145312270|ref|NP_001077432.1| tudor and KH domain-containing protein isoform a [Homo sapiens]
gi|332278122|sp|Q9Y2W6.2|TDRKH_HUMAN RecName: Full=Tudor and KH domain-containing protein; AltName:
Full=Tudor domain-containing protein 2
gi|119573794|gb|EAW53409.1| tudor and KH domain containing, isoform CRA_b [Homo sapiens]
gi|119573796|gb|EAW53411.1| tudor and KH domain containing, isoform CRA_b [Homo sapiens]
gi|162317984|gb|AAI56178.1| Tudor and KH domain containing [synthetic construct]
gi|225000644|gb|AAI72470.1| Tudor and KH domain containing [synthetic construct]
gi|261858570|dbj|BAI45807.1| tudor and KH domain containing [synthetic construct]
Length = 561
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I++ VP+ AV ++IG+ G IK+L+ +TGAR+ ED +R ++SG P QV +A+
Sbjct: 55 IEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDT--EDVGDERVLLISGFPVQVCKAK 112
Query: 107 ARIEELI--DSVMVEQFS 122
A I +++ ++ + EQ S
Sbjct: 113 AAIHQILTENTPVSEQLS 130
>gi|85838458|gb|ABC86135.1| nova [Paracentrotus lividus]
Length = 553
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
+++ VP + G++IGKGG MIK + ++G+RVQ Q + S+R +SG P+ ++A
Sbjct: 168 VKIVVPNSTAGLIIGKGGAMIKSIMEQSGSRVQISQKSDGITLSERVITISGEPENNRKA 227
Query: 106 RARI 109
+ I
Sbjct: 228 MSFI 231
Score = 42.4 bits (98), Expect = 0.069, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQ 103
+++ VP+ VG ++GKGG + + QN TGA++Q + E P +RR ++G Q
Sbjct: 471 ILESEVPETLVGAILGKGGKTLVEFQNLTGAKIQISKKNEYVPGTRNRRVTITGPVTAAQ 530
Query: 104 EA 105
A
Sbjct: 531 NA 532
Score = 39.3 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQ 103
++++ +P A G +IGKGG I +LQ +TG V+ + + P +R +L+G + +
Sbjct: 75 ILKMLIPSTAAGSIIGKGGQTIAQLQRDTGTNVKLSKANDFYPGTQERVALLTGPVESLN 134
Query: 104 EARARIEELI 113
+ E I
Sbjct: 135 NVAVFVLEKI 144
>gi|427792957|gb|JAA61930.1| Putative pasilla, partial [Rhipicephalus pulchellus]
Length = 538
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 6/68 (8%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQEA 105
++ VP A G +IGKGG+ I LQ E GARV+ + + P ++R C+++GS + V
Sbjct: 41 KILVPAVAAGAIIGKGGETIALLQKEAGARVKMSKSNDFYPGTTERVCLITGSVEGV--- 97
Query: 106 RARIEELI 113
RI E I
Sbjct: 98 -LRIHEFI 104
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 31/48 (64%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM 94
+++ VP + G++IGKGG IK+++ E+GA VQ Q +D RC+
Sbjct: 134 VKILVPNSTAGMIIGKGGSYIKQIKEESGAYVQISQKSKDHALAERCI 181
>gi|56549653|ref|NP_002506.2| RNA-binding protein Nova-1 isoform 1 [Homo sapiens]
gi|50959950|gb|AAH75039.1| Neuro-oncological ventral antigen 1 [Homo sapiens]
gi|50960205|gb|AAH75038.1| Neuro-oncological ventral antigen 1 [Homo sapiens]
gi|119586397|gb|EAW65993.1| neuro-oncological ventral antigen 1, isoform CRA_c [Homo sapiens]
gi|119586399|gb|EAW65995.1| neuro-oncological ventral antigen 1, isoform CRA_c [Homo sapiens]
gi|158255480|dbj|BAF83711.1| unnamed protein product [Homo sapiens]
Length = 507
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
+V+++ VP+ VG ++GKGG + + Q TGAR+Q + E P +R+ ++G+P
Sbjct: 422 DVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAAT 481
Query: 103 QEARARIEELI 113
Q A+ I + I
Sbjct: 482 QAAQYLITQRI 492
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNA 111
Query: 105 ARARIEELI 113
I E I
Sbjct: 112 VHGFIAEKI 120
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
+++ VP + G++IGKGG +K + ++GA VQ Q + + +R +SG P+Q ++A
Sbjct: 174 VKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 233
Query: 106 RARIEELIDSVMVEQFSGA 124
+E +I + + SG+
Sbjct: 234 ---VELIIQKIQEDPQSGS 249
>gi|314122254|ref|NP_001186641.1| RNA-binding protein Nova-1 isoform 1 [Gallus gallus]
gi|387763164|ref|NP_001248729.1| RNA-binding protein Nova-1 [Macaca mulatta]
gi|57090475|ref|XP_547754.1| PREDICTED: RNA-binding protein Nova-1 isoform 1 [Canis lupus
familiaris]
gi|114652475|ref|XP_001170675.1| PREDICTED: RNA-binding protein Nova-1 isoform 3 [Pan troglodytes]
gi|224051378|ref|XP_002200539.1| PREDICTED: RNA-binding protein Nova-1 isoform 2 [Taeniopygia
guttata]
gi|291403671|ref|XP_002718160.1| PREDICTED: neuro-oncological ventral antigen 1 isoform 1
[Oryctolagus cuniculus]
gi|296214716|ref|XP_002753741.1| PREDICTED: RNA-binding protein Nova-1 isoform 1 [Callithrix
jacchus]
gi|297694849|ref|XP_002824680.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Pongo abelii]
gi|332223197|ref|XP_003260754.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Nomascus
leucogenys]
gi|344273491|ref|XP_003408555.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Loxodonta
africana]
gi|395838270|ref|XP_003792040.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Otolemur
garnettii]
gi|402875871|ref|XP_003901717.1| PREDICTED: RNA-binding protein Nova-1-like [Papio anubis]
gi|410962020|ref|XP_003987575.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Felis catus]
gi|426376604|ref|XP_004055087.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Gorilla
gorilla gorilla]
gi|355778493|gb|EHH63529.1| hypothetical protein EGM_16516 [Macaca fascicularis]
gi|380813130|gb|AFE78439.1| RNA-binding protein Nova-1 isoform 1 [Macaca mulatta]
gi|410293724|gb|JAA25462.1| neuro-oncological ventral antigen 1 [Pan troglodytes]
gi|410353659|gb|JAA43433.1| neuro-oncological ventral antigen 1 [Pan troglodytes]
Length = 507
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
+V+++ VP+ VG ++GKGG + + Q TGAR+Q + E P +R+ ++G+P
Sbjct: 422 DVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAAT 481
Query: 103 QEARARIEELI 113
Q A+ I + I
Sbjct: 482 QAAQYLITQRI 492
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNA 111
Query: 105 ARARIEELI 113
I E I
Sbjct: 112 VHGFIAEKI 120
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
+++ VP + G++IGKGG +K + ++GA VQ Q + + +R +SG P+Q ++A
Sbjct: 174 VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 233
Query: 106 RARIEELIDSVMVEQFSGA 124
+E +I + + SG+
Sbjct: 234 ---VELIIQKIQEDPQSGS 249
>gi|256017197|ref|NP_067336.1| RNA-binding protein Nova-1 [Mus musculus]
gi|122065708|sp|Q9JKN6.2|NOVA1_MOUSE RecName: Full=RNA-binding protein Nova-1; AltName:
Full=Neuro-oncological ventral antigen 1; AltName:
Full=Ventral neuron-specific protein 1
gi|148704854|gb|EDL36801.1| mCG140771, isoform CRA_b [Mus musculus]
gi|149051188|gb|EDM03361.1| neuro-oncological ventral antigen 1, isoform CRA_b [Rattus
norvegicus]
Length = 507
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
+V+++ VP+ VG ++GKGG + + Q TGAR+Q + E P +R+ ++G+P
Sbjct: 422 DVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAAT 481
Query: 103 QEARARIEELI 113
Q A+ I + I
Sbjct: 482 QAAQYLITQRI 492
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALNA 111
Query: 105 ARARIEELI 113
I E I
Sbjct: 112 VHGFIAEKI 120
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
+++ VP + G++IGKGG +K + ++GA VQ Q + + +R +SG P+Q ++A
Sbjct: 174 VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 233
Query: 106 RARIEELIDSVMVEQFSGA 124
+E +I + + SG+
Sbjct: 234 ---VELIIQKIQEDPQSGS 249
>gi|33516919|sp|Q80WA4.1|NOVA1_RAT RecName: Full=RNA-binding protein Nova-1; AltName:
Full=Neuro-oncological ventral antigen 1
gi|30230625|gb|AAP20872.1| neuro-oncological ventral antigen 1-like protein [Rattus
norvegicus]
Length = 474
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
+V+++ VP+ VG ++GKGG + + Q TGAR+Q + E P +R+ ++G+P
Sbjct: 397 DVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAAT 456
Query: 103 QEARARIEELI 113
Q A+ I + I
Sbjct: 457 QAAQYLITQRI 467
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 51 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALNA 110
Query: 105 ARARIEELI 113
I E I
Sbjct: 111 VHGFIAEKI 119
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
+++ VP + G++IGKGG +K + ++GA VQ Q + + +R +SG P+Q ++A
Sbjct: 149 VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 208
Query: 106 RARIEELIDSVMVEQFSGA 124
+E +I + + SG+
Sbjct: 209 ---VELIIQKIQEDPQSGS 224
>gi|1709303|sp|P51513.1|NOVA1_HUMAN RecName: Full=RNA-binding protein Nova-1; AltName:
Full=Neuro-oncological ventral antigen 1; AltName:
Full=Onconeural ventral antigen 1; AltName:
Full=Paraneoplastic Ri antigen; AltName: Full=Ventral
neuron-specific protein 1
gi|440878|gb|AAA16022.1| onconeural ventral antigen-1 [Homo sapiens]
Length = 510
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
+V+++ VP+ VG ++GKGG + + Q TGAR+Q + E P +R+ ++G+P
Sbjct: 425 DVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAAT 484
Query: 103 QEARARIEELI 113
Q A+ I + I
Sbjct: 485 QAAQYLITQRI 495
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD-----PSDRRCMLSGSPDQ 101
++V +P A G +IGKGG I +LQ ETGA ++ ++ + ++R C++ G+ +
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKLSKSKDFYPGTTERVCLIQGTVEA 111
Query: 102 VQEARARIEELI 113
+ I E I
Sbjct: 112 LNAVHGFIAEKI 123
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
+++ VP + G++IGKGG +K + ++GA VQ Q + + +R +SG P+Q ++A
Sbjct: 177 VKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 236
Query: 106 RARIEELIDSVMVEQFSGA 124
+E +I + + SG+
Sbjct: 237 ---VELIIQKIQEDPQSGS 252
>gi|354471632|ref|XP_003498045.1| PREDICTED: RNA-binding protein Nova-1 [Cricetulus griseus]
Length = 493
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
+V+++ VP+ VG ++GKGG + + Q TGAR+Q + E P +R+ ++G+P
Sbjct: 408 DVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAAT 467
Query: 103 QEARARIEELI 113
Q A+ I + I
Sbjct: 468 QAAQYLITQRI 478
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 38 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNA 97
Query: 105 ARARIEELI 113
I E I
Sbjct: 98 VHGFIAEKI 106
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
+++ VP + G++IGKGG +K + ++GA VQ Q + + +R +SG P+Q ++A
Sbjct: 160 VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 219
Query: 106 RARIEELIDSVMVEQFSGA 124
+E +I + + SG+
Sbjct: 220 ---VELIIQKIQEDPQSGS 235
>gi|348558003|ref|XP_003464808.1| PREDICTED: RNA-binding protein Nova-1 isoform 1 [Cavia porcellus]
Length = 507
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
+V+++ VP+ VG ++GKGG + + Q TGAR+Q + E P +R+ ++G+P
Sbjct: 422 DVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAAT 481
Query: 103 QEARARIEELI 113
Q A+ I + I
Sbjct: 482 QAAQYLITQRI 492
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNA 111
Query: 105 ARARIEELI 113
I E I
Sbjct: 112 VHGFIAEKI 120
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
+++ VP + G++IGKGG +K + ++GA VQ Q + + +R +SG P+Q ++A
Sbjct: 174 VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 233
Query: 106 RARIEELIDSVMVEQFSGA 124
+E +I + + SG+
Sbjct: 234 ---VELIIQKIQEDPQSGS 249
>gi|281352862|gb|EFB28446.1| hypothetical protein PANDA_007977 [Ailuropoda melanoleuca]
Length = 558
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I++ VP+ AV ++IG+ G IK+L+ +TGAR+ ED +R ++SG P QV +A+
Sbjct: 55 IEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDT--EDVGDERVLLISGFPVQVCKAK 112
Query: 107 ARIEELI--DSVMVEQFS 122
A I +++ ++ + EQ S
Sbjct: 113 AAIHQILTENTPVSEQLS 130
>gi|16041180|dbj|BAB69757.1| hypothetical protein [Macaca fascicularis]
Length = 561
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I++ VP+ AV ++IG+ G IK+L+ +TGAR+ ED +R ++SG P QV +A+
Sbjct: 55 IEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDT--EDVGDERVLLISGFPVQVCKAK 112
Query: 107 ARIEELI--DSVMVEQFS 122
A I +++ ++ + EQ S
Sbjct: 113 AAIHQILTENTPVSEQLS 130
Score = 39.7 bits (91), Expect = 0.45, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM-LSGSPDQVQEAR 106
Q+ VP+ +VG +IG+GG+ I+ + +GAR+ V+ E R + +SG+ +V AR
Sbjct: 128 QLSVPQRSVGRIIGRGGETIRSICKASGARITCVKESEGTLLLSRLIKISGTQKEVAAAR 187
Query: 107 ARIEELI 113
I E +
Sbjct: 188 HLILEKV 194
>gi|7025507|gb|AAF35907.1|AF232828_1 ventral neuron-specific protein 1 NOVA1 [Mus musculus]
Length = 493
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
+V+++ VP+ VG ++GKGG + + Q TGAR+Q + E P +R+ ++G+P
Sbjct: 408 DVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAAT 467
Query: 103 QEARARIEELI 113
Q A+ I + I
Sbjct: 468 QAAQYLITQRI 478
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 38 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALNA 97
Query: 105 ARARIEELI 113
I E I
Sbjct: 98 VHGFIAEKI 106
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
+++ VP + G++IGKGG +K + ++GA VQ Q + + +R +SG P+Q ++A
Sbjct: 160 VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 219
Query: 106 RARIEELIDSVMVEQFSGA 124
+E +I + + SG+
Sbjct: 220 ---VELIIQKIQEDPQSGS 235
>gi|397475479|ref|XP_003809166.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Pan paniscus]
Length = 466
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
+V+++ VP+ VG ++GKGG + + Q TGAR+Q + E P +R+ ++G+P
Sbjct: 381 DVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAAT 440
Query: 103 QEARARIEELI 113
Q A+ I + I
Sbjct: 441 QAAQYLITQRI 451
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 11 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNA 70
Query: 105 ARARIEELI 113
I E I
Sbjct: 71 VHGFIAEKI 79
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
+++ VP + G++IGKGG +K + ++GA VQ Q + + +R +SG P+Q ++A
Sbjct: 133 VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 192
Query: 106 RARIEELIDSVMVEQFSGA 124
+E +I + + SG+
Sbjct: 193 ---VELIIQKIQEDPQSGS 208
>gi|158256368|dbj|BAF84157.1| unnamed protein product [Homo sapiens]
Length = 507
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
+V+++ VP+ VG ++GKGG + + Q TGAR+Q + E P +R+ ++G+P
Sbjct: 422 DVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAAT 481
Query: 103 QEARARIEELI 113
Q A+ I + I
Sbjct: 482 QAAQYLITQRI 492
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNA 111
Query: 105 ARARIEELI 113
I E I
Sbjct: 112 VHGFIAEKI 120
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
+++ VP + G++IGKGG +K + ++GA VQ Q + + +R +SG P+Q ++A
Sbjct: 174 VKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 233
Query: 106 RARIEELIDSVMVEQFSGA 124
+E +I + + SG+
Sbjct: 234 ---VELIIQKIQEDPQSGS 249
>gi|148691147|gb|EDL23094.1| neuro-oncological ventral antigen 2 [Mus musculus]
Length = 411
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 6 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 65
Query: 105 ARARIEE 111
+ I E
Sbjct: 66 VHSFIAE 72
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEAR 106
++ VP + G++IGKGG +K + ++GA VQ Q E + +R +SG P+QV +A
Sbjct: 105 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAV 164
Query: 107 ARI 109
+ I
Sbjct: 165 SAI 167
>gi|156056018|ref|XP_001593933.1| hypothetical protein SS1G_05361 [Sclerotinia sclerotiorum 1980]
gi|154703145|gb|EDO02884.1| hypothetical protein SS1G_05361 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 554
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ VP AVG++IGKGG+ IK +QN TG ++ Q +R L GS + A+
Sbjct: 401 IFVPSEAVGMIIGKGGETIKDMQNTTGCKINVTQSSGPGEVEREIGLVGSQQAIAAAKRA 460
Query: 109 IEELIDSV 116
IE+ +++V
Sbjct: 461 IEDKVEAV 468
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 39/59 (66%)
Query: 56 VGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
VG++IG+ G+ ++++++ETG RVQF+ ++ R C ++G + +A+A I +ID
Sbjct: 200 VGLIIGRQGENLRRVESETGCRVQFITGPDETGPFRTCKITGPRARRADAKAEITRIID 258
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+Q+ VP VG++IG+GG+ I+ LQ +G V V ++ R L G+ + A+
Sbjct: 292 MQIMVPDRTVGLIIGRGGETIRDLQERSGCHVNIVGEQKSVNGLRPVNLIGTREAAAMAK 351
Query: 107 ARIEELIDS 115
I E+++S
Sbjct: 352 DLIMEIVES 360
>gi|332810294|ref|XP_003308432.1| PREDICTED: tudor and KH domain-containing protein isoform 1 [Pan
troglodytes]
gi|332810296|ref|XP_003308433.1| PREDICTED: tudor and KH domain-containing protein isoform 2 [Pan
troglodytes]
gi|332810300|ref|XP_003308435.1| PREDICTED: tudor and KH domain-containing protein isoform 4 [Pan
troglodytes]
gi|397492746|ref|XP_003817281.1| PREDICTED: tudor and KH domain-containing protein isoform 1 [Pan
paniscus]
gi|397492748|ref|XP_003817282.1| PREDICTED: tudor and KH domain-containing protein isoform 2 [Pan
paniscus]
gi|397492750|ref|XP_003817283.1| PREDICTED: tudor and KH domain-containing protein isoform 3 [Pan
paniscus]
Length = 561
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I++ VP+ AV ++IG+ G IK+L+ +TGAR+ ED +R ++SG P QV +A+
Sbjct: 55 IEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDT--EDVGDERVLLISGFPVQVCKAK 112
Query: 107 ARIEELI--DSVMVEQFS 122
A I +++ ++ + EQ S
Sbjct: 113 AAIHQILTENTPVSEQLS 130
>gi|332220305|ref|XP_003259297.1| PREDICTED: tudor and KH domain-containing protein isoform 2
[Nomascus leucogenys]
Length = 561
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I++ VP+ AV ++IG+ G IK+L+ +TGAR+ ED +R ++SG P QV +A+
Sbjct: 55 IEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDT--EDVGDERVLLISGFPVQVCKAK 112
Query: 107 ARIEELI--DSVMVEQFS 122
A I +++ ++ + EQ S
Sbjct: 113 AAIHQILTENTPVSEQLS 130
>gi|451172115|ref|NP_001094011.1| RNA-binding protein Nova-1 [Rattus norvegicus]
Length = 482
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
+V+++ VP+ VG ++GKGG + + Q TGAR+Q + E P +R+ ++G+P
Sbjct: 397 DVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAAT 456
Query: 103 QEARARIEELI 113
Q A+ I + I
Sbjct: 457 QAAQYLITQRI 467
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 51 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALNA 110
Query: 105 ARARIEELI 113
I E I
Sbjct: 111 VHGFIAEKI 119
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
+++ VP + G++IGKGG +K + ++GA VQ Q + + +R +SG P+Q ++A
Sbjct: 149 VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 208
Query: 106 RARIEELIDSVMVEQFSGA 124
+E +I + + SG+
Sbjct: 209 ---VELIIQKIQEDPQSGS 224
>gi|149051189|gb|EDM03362.1| neuro-oncological ventral antigen 1, isoform CRA_c [Rattus
norvegicus]
Length = 483
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
+V+++ VP+ VG ++GKGG + + Q TGAR+Q + E P +R+ ++G+P
Sbjct: 398 DVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAAT 457
Query: 103 QEARARIEELI 113
Q A+ I + I
Sbjct: 458 QAAQYLITQRI 468
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALNA 111
Query: 105 ARARIEELI 113
I E I
Sbjct: 112 VHGFIAEKI 120
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
+++ VP + G++IGKGG +K + ++GA VQ Q + + +R +SG P+Q ++A
Sbjct: 150 VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 209
Query: 106 RARIEELIDSVMVEQFSGA 124
+E +I + + SG+
Sbjct: 210 ---VELIIQKIQEDPQSGS 225
>gi|355693195|gb|EHH27798.1| hypothetical protein EGK_18083, partial [Macaca mulatta]
Length = 488
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
+V+++ VP+ VG ++GKGG + + Q TGAR+Q + E P +R+ ++G+P
Sbjct: 403 DVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAAT 462
Query: 103 QEARARIEELI 113
Q A+ I + I
Sbjct: 463 QAAQYLITQRI 473
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 33 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNA 92
Query: 105 ARARIEELI 113
I E I
Sbjct: 93 VHGFIAEKI 101
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
+++ VP + G++IGKGG +K + ++GA VQ Q + + +R +SG P+Q ++A
Sbjct: 155 VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 214
Query: 106 RARIEELIDSVMVEQFSGA 124
+E +I + + SG+
Sbjct: 215 ---VELIIQKIQEDPQSGS 230
>gi|348558005|ref|XP_003464809.1| PREDICTED: RNA-binding protein Nova-1 isoform 2 [Cavia porcellus]
Length = 483
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
+V+++ VP+ VG ++GKGG + + Q TGAR+Q + E P +R+ ++G+P
Sbjct: 398 DVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAAT 457
Query: 103 QEARARIEELI 113
Q A+ I + I
Sbjct: 458 QAAQYLITQRI 468
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNA 111
Query: 105 ARARIEELI 113
I E I
Sbjct: 112 VHGFIAEKI 120
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
+++ VP + G++IGKGG +K + ++GA VQ Q + + +R +SG P+Q ++A
Sbjct: 150 VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 209
Query: 106 RARIEELIDSVMVEQFSGA 124
+E +I + + SG+
Sbjct: 210 ---VELIIQKIQEDPQSGS 225
>gi|311893445|dbj|BAJ25854.1| P-element somatic inhibitor homologue [Ostrinia scapulalis]
Length = 95
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 41/66 (62%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
++ +P VG++IGK G IK+LQ ++GA++ +Q + ++ +SG P +V+ A+
Sbjct: 2 EIMLPGPKVGLIIGKNGKTIKQLQEQSGAKMVVIQDGPNTEYEKPLRISGDPAKVEHAKQ 61
Query: 108 RIEELI 113
+ EL+
Sbjct: 62 LVHELL 67
>gi|115927400|ref|XP_782196.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Strongylocentrotus purpuratus]
Length = 657
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 11/116 (9%)
Query: 30 NENGDGRGGMWEVTWEV-------IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ 82
N N G GGM+ V +++ V VG +IGKGG+ I+ + ETG +V +
Sbjct: 179 NRNQGGPGGMYHQQQNVPDTSNFPVRILVRSEFVGAIIGKGGNNIRAITKETGCKVDIHR 238
Query: 83 MREDDPSDRRCMLSGSPDQVQEARARIEELIDSVMVEQFSGANFDKLRSTVLANRS 138
S++ + G P QV E +I E VM+++ S + + VLA+ +
Sbjct: 239 KDNIGSSEKAVTICGEPQQVTETIKKIVE----VMIKESSEESHTDMPLKVLAHNA 290
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
++ VP VG +IGK G +++LQ TGARV+ + R D D SG+P+ E
Sbjct: 524 EIAVPSQLVGRIIGKRGQRVRELQRVTGARVEVPRRRGDGAGDEG---SGTPEPPTE 577
>gi|441656325|ref|XP_004093124.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein Nova-2
[Nomascus leucogenys]
Length = 500
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 69 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 128
Query: 105 ARARIEELIDSV 116
+ I E + +
Sbjct: 129 VHSFIAEKVREI 140
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEAR 106
++ VP + G++IGKGG +K + ++GA VQ Q E + +R +SG P+QV +A
Sbjct: 168 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAV 227
Query: 107 ARI 109
+ I
Sbjct: 228 SAI 230
>gi|148706782|gb|EDL38729.1| mCG5013, isoform CRA_b [Mus musculus]
Length = 566
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I++ VP+ AV ++IG+ G IK+L+ +TGAR+ ED +R ++SG P QV +A+
Sbjct: 61 IEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDT--EDVGDERVLLISGFPVQVCKAK 118
Query: 107 ARIEELI--DSVMVEQFS 122
A I +++ ++ + EQ S
Sbjct: 119 AAIHQILTENTPVFEQLS 136
>gi|314122361|ref|NP_001186642.1| RNA-binding protein Nova-1 isoform 2 [Gallus gallus]
gi|114652477|ref|XP_001170656.1| PREDICTED: RNA-binding protein Nova-1 isoform 2 [Pan troglodytes]
gi|224051380|ref|XP_002200538.1| PREDICTED: RNA-binding protein Nova-1 isoform 1 [Taeniopygia
guttata]
gi|291403673|ref|XP_002718161.1| PREDICTED: neuro-oncological ventral antigen 1 isoform 2
[Oryctolagus cuniculus]
gi|296214718|ref|XP_002753742.1| PREDICTED: RNA-binding protein Nova-1 isoform 2 [Callithrix
jacchus]
gi|297694851|ref|XP_002824681.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Pongo abelii]
gi|332223199|ref|XP_003260755.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Nomascus
leucogenys]
gi|344273489|ref|XP_003408554.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Loxodonta
africana]
gi|345804243|ref|XP_860979.2| PREDICTED: RNA-binding protein Nova-1 isoform 6 [Canis lupus
familiaris]
gi|395838272|ref|XP_003792041.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Otolemur
garnettii]
gi|410962022|ref|XP_003987576.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Felis catus]
gi|426376606|ref|XP_004055088.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Gorilla
gorilla gorilla]
gi|122064615|sp|Q2PFW9.1|NOVA1_MACFA RecName: Full=RNA-binding protein Nova-1; AltName:
Full=Neuro-oncological ventral antigen 1; AltName:
Full=Ventral neuron-specific protein 1
gi|84579135|dbj|BAE73001.1| hypothetical protein [Macaca fascicularis]
gi|90079349|dbj|BAE89354.1| unnamed protein product [Macaca fascicularis]
gi|380813128|gb|AFE78438.1| RNA-binding protein Nova-1 isoform 2 [Macaca mulatta]
Length = 483
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
+V+++ VP+ VG ++GKGG + + Q TGAR+Q + E P +R+ ++G+P
Sbjct: 398 DVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAAT 457
Query: 103 QEARARIEELI 113
Q A+ I + I
Sbjct: 458 QAAQYLITQRI 468
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNA 111
Query: 105 ARARIEELI 113
I E I
Sbjct: 112 VHGFIAEKI 120
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
+++ VP + G++IGKGG +K + ++GA VQ Q + + +R +SG P+Q ++A
Sbjct: 150 VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 209
Query: 106 RARIEELIDSVMVEQFSGA 124
+E +I + + SG+
Sbjct: 210 ---VELIIQKIQEDPQSGS 225
>gi|449266969|gb|EMC77947.1| Insulin-like growth factor 2 mRNA-binding protein 2, partial
[Columba livia]
Length = 522
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 37/65 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
EV+ + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 349 EVVNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAEGPDASERMVIITGPPEAQFK 408
Query: 105 ARARI 109
A+ RI
Sbjct: 409 AQGRI 413
>gi|345782663|ref|XP_851426.2| PREDICTED: tudor and KH domain-containing protein [Canis lupus
familiaris]
Length = 563
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I++ VP+ AV ++IG+ G IK+L+ +TGAR+ ED +R ++SG P QV +A+
Sbjct: 55 IEMRVPQEAVKLIIGRQGTNIKQLRKQTGARIDVDT--EDVGDERVLLISGFPVQVCKAK 112
Query: 107 ARIEELI--DSVMVEQFS 122
A I +++ ++ + EQ S
Sbjct: 113 AAIHQILTENTPVSEQLS 130
>gi|56549651|ref|NP_006480.2| RNA-binding protein Nova-1 isoform 2 [Homo sapiens]
gi|119586394|gb|EAW65990.1| neuro-oncological ventral antigen 1, isoform CRA_a [Homo sapiens]
gi|119586396|gb|EAW65992.1| neuro-oncological ventral antigen 1, isoform CRA_a [Homo sapiens]
Length = 483
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
+V+++ VP+ VG ++GKGG + + Q TGAR+Q + E P +R+ ++G+P
Sbjct: 398 DVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAAT 457
Query: 103 QEARARIEELI 113
Q A+ I + I
Sbjct: 458 QAAQYLITQRI 468
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNA 111
Query: 105 ARARIEELI 113
I E I
Sbjct: 112 VHGFIAEKI 120
Score = 43.9 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
+++ VP + G++IGKGG +K + ++GA VQ Q + + +R +SG P+Q ++A
Sbjct: 150 VKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 209
Query: 106 RARIEELIDSVMVEQFSGA 124
+E +I + + SG+
Sbjct: 210 ---VELIIQKIQEDPQSGS 225
>gi|432101641|gb|ELK29690.1| RNA-binding protein Nova-2 [Myotis davidii]
Length = 294
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 43 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 102
Query: 105 ARARIEELIDSV 116
+ I E + +
Sbjct: 103 VHSFIAEKVREI 114
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 10/91 (10%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEAR 106
++ VP + G++IGKGG +K + ++GA VQ Q E + +R +SG P+QV +A
Sbjct: 142 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAV 201
Query: 107 ARI---------EELIDSVMVEQFSGANFDK 128
+ I +EL++ + E GA K
Sbjct: 202 SAIVQKLAAESAKELVEIAVPENLVGAILGK 232
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDR 91
E E++++ VP+ VG ++GKGG + + Q TGAR+Q + E P R
Sbjct: 211 ESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTR 261
>gi|444515068|gb|ELV10730.1| Tudor and KH domain-containing protein [Tupaia chinensis]
Length = 510
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I++ VP+ AV ++IG+ G IK+L+ +TGAR+ ED +R ++SG P QV +A+
Sbjct: 55 IEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDT--EDVGDERVLLISGFPVQVCKAK 112
Query: 107 ARIEELI--DSVMVEQFS 122
A I +++ ++ + EQ S
Sbjct: 113 AAIHQILTENTPVSEQLS 130
>gi|301767872|ref|XP_002919361.1| PREDICTED: tudor and KH domain-containing protein-like [Ailuropoda
melanoleuca]
Length = 562
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I++ VP+ AV ++IG+ G IK+L+ +TGAR+ ED +R ++SG P QV +A+
Sbjct: 55 IEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDT--EDVGDERVLLISGFPVQVCKAK 112
Query: 107 ARIEELI--DSVMVEQFS 122
A I +++ ++ + EQ S
Sbjct: 113 AAIHQILTENTPVSEQLS 130
>gi|242002844|ref|XP_002436065.1| RNA-binding protein Nova-1, putative [Ixodes scapularis]
gi|215499401|gb|EEC08895.1| RNA-binding protein Nova-1, putative [Ixodes scapularis]
Length = 474
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 6/68 (8%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQEA 105
++ VP A G +IGKGG+ I LQ E GARV+ + + P ++R C+++GS + V
Sbjct: 53 KILVPAVAAGAIIGKGGETIALLQKEAGARVKMSKSNDFYPGTTERVCLITGSVEGV--- 109
Query: 106 RARIEELI 113
RI E I
Sbjct: 110 -LRIHEFI 116
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 31/48 (64%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM 94
+++ VP + G++IGKGG IK+++ E+GA VQ Q +D RC+
Sbjct: 146 VKILVPNSTAGMIIGKGGSYIKQIKEESGAYVQISQKSKDHALAERCI 193
>gi|90079215|dbj|BAE89287.1| unnamed protein product [Macaca fascicularis]
Length = 516
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I++ VP+ AV ++IG+ G IK+L+ +TGAR+ ED +R ++SG P QV +A+
Sbjct: 55 IEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDT--EDVGDERVLLISGFPVQVCKAK 112
Query: 107 ARIEELI--DSVMVEQFS 122
A I +++ ++ + EQ S
Sbjct: 113 AAIHQILTENTPVSEQLS 130
>gi|361126940|gb|EHK98925.1| putative KH domain-containing protein [Glarea lozoyensis 74030]
Length = 1322
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 6/76 (7%)
Query: 43 TWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRE-----DDPSDR-RCMLS 96
T + I V VP++ +IGKGG IK +Q E+GA++Q ++ + D+ D ++
Sbjct: 289 TQKSINVPVPRSVRAHIIGKGGSTIKSIQQESGAKIQLPKVEDTPELTDEEDDTINIVID 348
Query: 97 GSPDQVQEARARIEEL 112
G+P VQ ARA IE++
Sbjct: 349 GNPIAVQLARAEIEKI 364
Score = 35.8 bits (81), Expect = 5.9, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLS--GSPDQVQEAR 106
V V +G +IG+ G + K+++ETGA++ R+ R +S G+ QV +A+
Sbjct: 911 VSVQAGQIGSLIGQRGAEMDKVRSETGAKIDVPNARDHKDQSTRVEISIKGTKSQVDQAK 970
Query: 107 ARIEE 111
IEE
Sbjct: 971 KIIEE 975
>gi|242019024|ref|XP_002429966.1| polyrC binding protein, putative [Pediculus humanus corporis]
gi|212515021|gb|EEB17228.1| polyrC binding protein, putative [Pediculus humanus corporis]
Length = 319
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
+++ VP A G +IGKGG+ I +LQ +TGAR++ + + P ++R C+++GS + +
Sbjct: 70 LKILVPCIAAGAIIGKGGETIAQLQKDTGARMKMSKANDFYPCTTERVCLVTGSVEAIMA 129
Query: 105 ARARIEELI 113
+ I + I
Sbjct: 130 VMSFIMDKI 138
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 28/40 (70%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED 86
+++ +P + G++IGKGG+ IK+++ E+G+ +Q Q D
Sbjct: 166 VKILIPNSTAGMIIGKGGNYIKQMKEESGSYIQLSQKSND 205
>gi|297279980|ref|XP_001108076.2| PREDICTED: tudor and KH domain-containing protein [Macaca mulatta]
Length = 538
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I++ VP+ AV ++IG+ G IK+L+ +TGAR+ ED +R ++SG P QV +A+
Sbjct: 32 IEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDT--EDVGDERVLLISGFPVQVCKAK 89
Query: 107 ARIEELI--DSVMVEQFS 122
A I +++ ++ + EQ S
Sbjct: 90 AAIHQILTENTPVSEQLS 107
>gi|328768071|gb|EGF78118.1| hypothetical protein BATDEDRAFT_90775 [Batrachochytrium
dendrobatidis JAM81]
Length = 604
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQEA 105
V VP+A VG+VIGKGG+ IK LQ +GAR+ + E +P + R + G+ V A
Sbjct: 261 HVQVPQAHVGLVIGKGGETIKSLQQRSGARITVAKETETEPGATTRIVTIYGNEHAVATA 320
Query: 106 RARIEELI 113
+ + E+I
Sbjct: 321 QHMVNEII 328
Score = 42.0 bits (97), Expect = 0.072, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
EV+ V K VG+VIG+GG+ IK +Q E G ++ V D +RR + G PD V
Sbjct: 355 EVVMVSATK--VGLVIGRGGETIKSIQGEYGVTLK-VDPNTDANGERRVAVYGQPDAVAR 411
Query: 105 ARARIEE 111
A+ + E
Sbjct: 412 AKEAVYE 418
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 18/68 (26%), Positives = 38/68 (55%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I V VP G+VIG+GG+ +K ++ + G R+Q ++ +++G +++ A
Sbjct: 164 IVVVVPPGKAGIVIGRGGETLKGIERQFGVRIQLEPSGPSGDIEKSAIITGGLQEIEAAS 223
Query: 107 ARIEELID 114
++E+I+
Sbjct: 224 KAVQEIIN 231
>gi|195445981|ref|XP_002070572.1| GK10958 [Drosophila willistoni]
gi|194166657|gb|EDW81558.1| GK10958 [Drosophila willistoni]
Length = 578
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQV 102
+++ VP A G +IGKGG+ I LQ +TGARV+ + + P ++R C+++GS + +
Sbjct: 68 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEGI 125
Score = 43.9 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 31/48 (64%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM 94
+++ VP + G++IGKGG IK+++ E+G+ VQ Q +D RC+
Sbjct: 161 VKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPKDVSLQERCI 208
>gi|126313736|ref|XP_001366858.1| PREDICTED: tudor and KH domain-containing protein [Monodelphis
domestica]
Length = 568
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+++ VP+ AV ++IG+ G IK+L+ +TGAR+ ED +R ++SG P QV +A+
Sbjct: 55 VEMRVPQEAVKLIIGRQGTNIKQLRKQTGARIDVDT--EDVGEERVLLISGFPVQVCKAK 112
Query: 107 ARIEELI--DSVMVEQFS 122
A I +++ ++ + EQ S
Sbjct: 113 AAIHQILTENTPVYEQLS 130
>gi|402594254|gb|EJW88180.1| hypothetical protein WUBG_00913 [Wuchereria bancrofti]
Length = 407
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSG 97
++V +P AAVG +IGKGG+ ++ L++E+G R+Q + +E P ++R C++ G
Sbjct: 4 VKVLIPSAAVGALIGKGGETMRNLKSESGCRLQMSKNQEVYPGTNERICLVKG 56
>gi|170580792|ref|XP_001895410.1| KH domain containing protein [Brugia malayi]
gi|158597654|gb|EDP35742.1| KH domain containing protein [Brugia malayi]
Length = 439
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSG 97
++V +P AAVG +IGKGG+ ++ L++E+G R+Q + +E P ++R C++ G
Sbjct: 36 VKVLIPSAAVGALIGKGGETMRNLKSESGCRLQMSKNQEVYPGTNERICLVKG 88
>gi|312079928|ref|XP_003142383.1| hypothetical protein LOAG_06799 [Loa loa]
Length = 440
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSG 97
++V +P AAVG +IGKGG+ ++ L++E+G R+Q + +E P ++R C++ G
Sbjct: 36 VKVLIPSAAVGALIGKGGETMRNLKSESGCRLQMSKNQEVYPGTNERICLVKG 88
>gi|328909277|gb|AEB61306.1| heterogeneous nuclear ribonucleoprotein K-like protein, partial
[Equus caballus]
Length = 245
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 174 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 232
Query: 93 CMLSGSPDQVQEA 105
++G+ DQ+Q A
Sbjct: 233 ITITGTQDQIQNA 245
>gi|119579011|gb|EAW58607.1| hCG1647467 [Homo sapiens]
Length = 314
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Query: 24 GNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM 83
G ++N+ G GG I V VP+ +VGVVIG G+MIKK+QN+ G +QF Q
Sbjct: 103 GGFGDWNDYGSRTGGD-------IDVPVPRHSVGVVIGLRGEMIKKIQNDAGVPIQFKQD 155
Query: 84 REDDPSDRRCMLSGSPD 100
P ++ + GSPD
Sbjct: 156 DGTGP-EKIAHIMGSPD 171
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSDRRCMLSGSPDQVQE 104
+Q +P G+VI KGG+ +K+LQ G ++ +Q ++ D + G P +VQ+
Sbjct: 29 TVQDMIPAGNAGLVIAKGGETMKQLQEYAGVKMILIQDGSQNTNVDNPLRIPGDPYKVQQ 88
Query: 105 ARARIEELI 113
A + +++
Sbjct: 89 ACQMVMDIL 97
>gi|149751261|ref|XP_001493239.1| PREDICTED: tudor and KH domain-containing protein isoform 1 [Equus
caballus]
Length = 561
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I++ VP+ AV ++IG+ G IK+L+ +TGAR+ ED +R ++SG P QV +A+
Sbjct: 55 IEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDT--EDVGEERVLLISGFPVQVCKAK 112
Query: 107 ARIEELI--DSVMVEQFS 122
A I +++ ++ + EQ S
Sbjct: 113 AAIHQILTENTPVSEQLS 130
>gi|355723709|gb|AES07981.1| tudor and KH domain containing [Mustela putorius furo]
Length = 543
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I++ VP+ AV ++IG+ G IK+L+ +TGAR+ ED +R ++SG P QV +A+
Sbjct: 55 IEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDT--EDVGDERVLLISGFPVQVCKAK 112
Query: 107 ARIEELI--DSVMVEQFS 122
A I +++ ++ + EQ S
Sbjct: 113 AAIHQILTENTPVSEQLS 130
>gi|261199862|ref|XP_002626332.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
gi|239594540|gb|EEQ77121.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
gi|239607932|gb|EEQ84919.1| conserved hypothetical protein [Ajellomyces dermatitidis ER-3]
Length = 576
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
+P AVG++IGKGGD IK++Q +G R+ D +DR L GS ++EA+ I
Sbjct: 409 IPPDAVGMIIGKGGDTIKEMQAISGCRINIQSPVGRD-ADREVTLVGSRGAIEEAKRMIM 467
Query: 111 ELIDSV 116
E IDS
Sbjct: 468 EKIDSA 473
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ V + VG++IG+ G+ ++++++ETG R+QF+ + + R C ++GS +A+A
Sbjct: 206 ISVESSLVGLIIGRQGESLRRIESETGTRIQFLDNADPSSTVRPCKITGSRAARGDAKAE 265
Query: 109 IEELIDSVMVEQFSGANFDK 128
I +I + SGA D+
Sbjct: 266 ITRIISESSASR-SGARADR 284
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
+ +++ VP VG++IG+GG+ I+ LQ +G V V + R L GSP+ +
Sbjct: 302 DAVRIMVPDRTVGLIIGRGGETIRDLQERSGCHVNIVNENKSINGLRPVNLIGSPEATER 361
Query: 105 ARARIEELIDS 115
A+ I E+++S
Sbjct: 362 AKNMILEIVES 372
>gi|355753438|gb|EHH57484.1| hypothetical protein EGM_07121 [Macaca fascicularis]
Length = 464
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 376 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 434
Query: 93 CMLSGSPDQVQEAR 106
++G+ DQ+Q A+
Sbjct: 435 ITITGTQDQIQNAQ 448
>gi|194376532|dbj|BAG57412.1| unnamed protein product [Homo sapiens]
Length = 459
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 371 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 429
Query: 93 CMLSGSPDQVQEAR 106
++G+ DQ+Q A+
Sbjct: 430 ITITGTQDQIQNAQ 443
>gi|327350457|gb|EGE79314.1| KH domain-containing protein [Ajellomyces dermatitidis ATCC 18188]
Length = 575
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
+P AVG++IGKGGD IK++Q +G R+ D +DR L GS ++EA+ I
Sbjct: 408 IPPDAVGMIIGKGGDTIKEMQAISGCRINIQSPVGRD-ADREVTLVGSRGAIEEAKRMIM 466
Query: 111 ELIDSV 116
E IDS
Sbjct: 467 EKIDSA 472
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ V + VG++IG+ G+ ++++++ETG R+QF+ + + R C ++GS +A+A
Sbjct: 205 ISVESSLVGLIIGRQGESLRRIESETGTRIQFLDNADPSSTVRPCKITGSRAARGDAKAE 264
Query: 109 IEELIDSVMVEQFSGANFDK 128
I +I + SGA D+
Sbjct: 265 ITRIISESSASR-SGARADR 283
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
+ +++ VP VG++IG+GG+ I+ LQ +G V V + R L GSP+ +
Sbjct: 301 DAVRIMVPDRTVGLIIGRGGETIRDLQERSGCHVNIVNENKSINGLRPVNLIGSPEATER 360
Query: 105 ARARIEELIDS 115
A+ I E+++S
Sbjct: 361 AKNMILEIVES 371
>gi|384490900|gb|EIE82096.1| hypothetical protein RO3G_06801 [Rhizopus delemar RA 99-880]
Length = 482
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 39/67 (58%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I V +P VG++IG+GG+ I+ Q ++GARV+ + + +R +SG P + A+
Sbjct: 288 IYVPIPSTVVGLIIGRGGETIRYFQEQSGARVKVDLTGDPNAEERNVCISGEPQALAVAK 347
Query: 107 ARIEELI 113
+EE +
Sbjct: 348 RLVEEKV 354
Score = 40.0 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 44/69 (63%), Gaps = 3/69 (4%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM-LSGSPDQVQE 104
+I++ VPK VG+VIG+GG+ I++ + ++ A++ +D ++ R + L G+ +Q
Sbjct: 195 MIRIPVPK--VGLVIGRGGETIREFEQQSRAKILLSSDSSNDINNERAITLVGTEAAIQH 252
Query: 105 ARARIEELI 113
A+ IE+++
Sbjct: 253 AKRLIEDIV 261
>gi|344275037|ref|XP_003409320.1| PREDICTED: protein bicaudal C homolog 1 [Loxodonta africana]
Length = 894
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 59 VIGKGGDMIKKLQNETGARVQFVQMREDDPSDR--RCMLSGSPDQVQEARARIEELIDSV 116
VIGKGG+ IKK+ ETG + F ++ +++ + ++G P V+ AR RI EL+ V
Sbjct: 67 VIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEKSNQVSIAGQPSGVESARVRIRELLPLV 126
Query: 117 MV 118
++
Sbjct: 127 LM 128
>gi|324506586|gb|ADY42808.1| RNA-binding protein Nova-2 [Ascaris suum]
Length = 565
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 37/53 (69%), Gaps = 2/53 (3%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRE--DDPSDRRCMLSG 97
+++ +P AAVG +IGKGG+ ++ L+NE+G R+Q + +E ++R C++ G
Sbjct: 69 VKILIPSAAVGAIIGKGGETMRSLKNESGCRLQMSKNQEVYHGTNERICLVKG 121
>gi|268562247|ref|XP_002638547.1| Hypothetical protein CBG05583 [Caenorhabditis briggsae]
Length = 399
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
I++ +P +AVG +IGKGG+ ++ L+ + RVQ + E P S+R C++ G + +
Sbjct: 43 IKILIPSSAVGAIIGKGGEAMRNLKTDNNCRVQMSKNSETYPGTSERICLVKGRLNNIMS 102
Query: 105 ARARIEELIDSVMVEQFSGANFDKLRST 132
I++ I +Q FD ++
Sbjct: 103 VIESIQDKIREKCADQAGSDAFDHKNTS 130
>gi|407929115|gb|EKG21954.1| K-like protein [Macrophomina phaseolina MS6]
Length = 315
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ VP AVG++IGKGG+ IK++QN TG ++ Q D +R L G+ +++A+
Sbjct: 150 IVVPSEAVGMIIGKGGETIKEMQNSTGCKINVSQASGAD-IEREIGLVGTRQAIEDAKRA 208
Query: 109 IEELIDSV 116
I + +D+V
Sbjct: 209 IWDKVDTV 216
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+Q+ VP VG++IG+ G+ I+ LQ +G V V + R L GS +EA
Sbjct: 52 VQIMVPDRTVGLIIGRQGETIRDLQERSGCHVNIVGENKSVNGLRPVNLIGS----REAA 107
Query: 107 ARIEELI 113
AR +ELI
Sbjct: 108 ARAKELI 114
>gi|348519757|ref|XP_003447396.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 1 [Oreochromis niloticus]
Length = 611
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 39/65 (60%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
EV+ + +P AVG +IGK G IK+L + GA ++ D ++R +++G+P+ +
Sbjct: 438 EVVYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAESPDVTERMVIITGTPEAQFK 497
Query: 105 ARARI 109
A+ RI
Sbjct: 498 AQGRI 502
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM-LSGSP 99
EV E + VP +A G VIGKGG + +LQN T A V + + D +D + +SG
Sbjct: 517 EVKLET-HIKVPSSAAGRVIGKGGKTVNELQNLTSAEVIVPRDQTPDENDEVFVKISGHF 575
Query: 100 DQVQEARARIEELIDSVMVEQ 120
Q A+ +I E+I V ++
Sbjct: 576 FASQTAQRKIREIIQQVKQQE 596
>gi|242024312|ref|XP_002432572.1| heterogeneous nuclear ribonucleoprotein k, putative [Pediculus
humanus corporis]
gi|212518032|gb|EEB19834.1| heterogeneous nuclear ribonucleoprotein k, putative [Pediculus
humanus corporis]
Length = 365
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 9/68 (13%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP----SDRRCMLSGSPDQVQ 103
QV +PK G +IGKGG I+K++ E+GA + D+P +DR +SG+P+Q+Q
Sbjct: 294 QVTIPKDLAGAIIGKGGSRIRKIRMESGAAITI-----DEPLPGSNDRIITISGTPNQIQ 348
Query: 104 EARARIEE 111
A+ +++
Sbjct: 349 MAQYLLQQ 356
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I++ V ++ G +IGKGG IK+L+ +TGAR++ +DR ++G + +A
Sbjct: 94 IRMLVHQSQAGCIIGKGGLKIKELREKTGARIKIYSNCCPQSTDRIVQINGKGNLCVDAI 153
Query: 107 ARIEELIDSVMVE----QFSGANFDKLRS 131
EL+ + ++ + NFD+ S
Sbjct: 154 RECMELLKTSPIKGMNNPYDPHNFDEYFS 182
>gi|119583083|gb|EAW62679.1| heterogeneous nuclear ribonucleoprotein K, isoform CRA_e [Homo
sapiens]
Length = 464
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 376 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 434
Query: 93 CMLSGSPDQVQEAR 106
++G+ DQ+Q A+
Sbjct: 435 ITITGTQDQIQNAQ 448
>gi|32451938|gb|AAH54653.1| Heterogeneous nuclear ribonucleoprotein K [Danio rerio]
gi|182890942|gb|AAI65841.1| Hnrnpk protein [Danio rerio]
Length = 420
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 11/90 (12%)
Query: 20 NDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQ 79
ND +G N+ GR + QV +PK G +IGKGG IK++++E+GA ++
Sbjct: 319 NDRYGG--SMNDGYGGRSSYSDGPVITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIK 376
Query: 80 FVQMREDDP----SDRRCMLSGSPDQVQEA 105
D+P DR ++G+ DQ+Q A
Sbjct: 377 I-----DEPLQGSEDRIITITGTQDQIQNA 401
>gi|449509689|ref|XP_002192903.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
[Taeniopygia guttata]
Length = 531
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 37/65 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
EV+ + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 359 EVVNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAEGPDASERMVIITGPPEAQFK 418
Query: 105 ARARI 109
A+ RI
Sbjct: 419 AQGRI 423
>gi|332027899|gb|EGI67954.1| Heterogeneous nuclear ribonucleoprotein K [Acromyrmex echinatior]
Length = 992
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 13/91 (14%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP----SDRRCMLSGSPDQVQ 103
QV +PK G +IGKGG I+K+++++GA + D+P +DR ++G P Q+Q
Sbjct: 164 QVTIPKDLAGAIIGKGGARIRKIRSDSGAGITI-----DEPLPGSNDRIITITGIPSQIQ 218
Query: 104 EARARIEELIDSVMVEQFSGANFDKLRSTVL 134
A + L+ ++ F+ + DK S+++
Sbjct: 219 MA----QYLLQQRYMDGFTTNDSDKFFSSLV 245
>gi|195107855|ref|XP_001998509.1| GI24011 [Drosophila mojavensis]
gi|193915103|gb|EDW13970.1| GI24011 [Drosophila mojavensis]
Length = 574
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGS 98
+++ VP A G +IGKGG+ I LQ +TGARV+ + + P ++R C+++GS
Sbjct: 68 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGS 121
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 31/48 (64%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM 94
+++ VP + G++IGKGG IK+++ E+G+ VQ Q +D RC+
Sbjct: 161 VKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPKDVSLQERCI 208
>gi|308813492|ref|XP_003084052.1| KH domain-containing protein / zinc finger protein-like (ISS)
[Ostreococcus tauri]
gi|116055935|emb|CAL58468.1| KH domain-containing protein / zinc finger protein-like (ISS),
partial [Ostreococcus tauri]
Length = 248
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 33 GDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSD-- 90
G G G +E + + V VP+A VG V+GK G I + +E+GA+V + E SD
Sbjct: 102 GCGTGSAFE---QCVLVPVPQAHVGTVVGKAGSNIARTSSESGAKVSMLSA-EYTNSDGS 157
Query: 91 RRCMLSGSPDQVQEARARIEE 111
R C + G+P VQ+A+ IE
Sbjct: 158 RLCRVVGTPLDVQKAKDMIEH 178
>gi|432934409|ref|XP_004081928.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Oryzias latipes]
Length = 600
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 39/65 (60%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
EV+ + +P AVG +IGK G IK+L + GA ++ D ++R +++G+P+ +
Sbjct: 427 EVVYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAESPDVTERMVIITGTPEAQFK 486
Query: 105 ARARI 109
A+ RI
Sbjct: 487 AQGRI 491
Score = 40.0 bits (92), Expect = 0.31, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM-LSGSP 99
EV E + VP +A G VIGKGG + +LQN T A V + + D +D + +SG
Sbjct: 506 EVKLET-HIKVPSSAAGRVIGKGGKTVNELQNLTSAEVIVPRDQIPDENDEVFVKISGHF 564
Query: 100 DQVQEARARIEELIDSVMVEQ 120
Q A+ +I E+I V ++
Sbjct: 565 FASQTAQRKIREIIQQVKQQE 585
>gi|297670563|ref|XP_002813434.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 2
[Pongo abelii]
Length = 464
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 31/93 (33%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
Query: 35 GRGGMWEVTWEVI-QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRC 93
GRG ++ + QV +PK G VIGKGG IK++ +E+GA ++ + E DR
Sbjct: 375 GRGSYADLGGPITTQVTIPKDLAGSVIGKGGQRIKQICHESGASIKIDEPLEGS-EDRII 433
Query: 94 MLSGSPDQVQEARARIEELIDSVMVEQFSGANF 126
++G+ +Q+Q A+ ++ + V+Q+SG F
Sbjct: 434 TITGTQEQIQNAQYLLQNSVKH--VKQYSGKFF 464
>gi|296228823|ref|XP_002759973.1| PREDICTED: tudor and KH domain-containing protein isoform 1
[Callithrix jacchus]
gi|166092126|gb|ABY82106.1| tudor and KH domain containing isoform a (predicted) [Callithrix
jacchus]
Length = 560
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I++ VP+ AV ++IG+ G IK+L+ +TGAR+ ED +R ++SG P QV +A+
Sbjct: 55 IEMRVPQDAVKLIIGRQGANIKQLRKQTGARIDVDT--EDVGDERVLLISGFPVQVCKAK 112
Query: 107 ARIEELI--DSVMVEQFS 122
A I +++ ++ + EQ S
Sbjct: 113 AAIHQILTENTPVSEQLS 130
>gi|294883752|ref|XP_002771057.1| Far upstream element-binding protein, putative [Perkinsus marinus
ATCC 50983]
gi|239874263|gb|EER02873.1| Far upstream element-binding protein, putative [Perkinsus marinus
ATCC 50983]
Length = 503
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP+ AVG IGKGGD IK+++ ETGAR++ Q +D R + +QV A ++
Sbjct: 20 VPQNAVGKAIGKGGDCIKRIRLETGARIEVDQSSKDQGFSRFIVTGARAEQVDNAVEQLN 79
Query: 111 ELIDS 115
E+I S
Sbjct: 80 EIIRS 84
>gi|223649086|gb|ACN11301.1| Heterogeneous nuclear ribonucleoprotein K [Salmo salar]
Length = 440
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ VI QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 353 GRGSYNDMGGPVITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 411
Query: 93 CMLSGSPDQVQEAR 106
+SG+ DQ+Q A+
Sbjct: 412 ITISGTQDQIQNAQ 425
>gi|156717598|ref|NP_001096339.1| neuro-oncological ventral antigen 1 [Xenopus (Silurana) tropicalis]
gi|134023955|gb|AAI35782.1| LOC100124925 protein [Xenopus (Silurana) tropicalis]
Length = 508
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
+V+++ VP+ VG ++GKGG + + Q TGAR+Q + E P +R+ ++G+P
Sbjct: 423 DVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAAT 482
Query: 103 QEARARIEELI 113
Q A+ I + +
Sbjct: 483 QAAQYLITQRV 493
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNA 111
Query: 105 ARARIEELI 113
I E I
Sbjct: 112 VHGFIAEKI 120
Score = 43.5 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
+++ VP + G++IGKGG +K + ++GA VQ Q + + +R +SG P+Q ++A
Sbjct: 174 VKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 233
Query: 106 RARIEELIDSVMVEQFSGA 124
+E ++ + + SG+
Sbjct: 234 ---VELIVQKIQEDPQSGS 249
>gi|133778726|gb|AAI34153.1| LOC557028 protein [Danio rerio]
Length = 302
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
EV+ + +P AVG +IGK G IK+L + GA ++ D +R +++G P+ +
Sbjct: 129 EVVYLFIPTPAVGALIGKKGQHIKELAHFAGASIKIAAPESPDEPERMVIITGPPEAQFK 188
Query: 105 ARARI 109
A+ RI
Sbjct: 189 AQGRI 193
>gi|148222190|ref|NP_001086143.1| neuro-oncological ventral antigen 1 [Xenopus laevis]
gi|49258011|gb|AAH74252.1| MGC84002 protein [Xenopus laevis]
Length = 484
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
+V+++ VP+ VG ++GKGG + + Q TGAR+Q + E P +R+ ++G+P
Sbjct: 399 DVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAAT 458
Query: 103 QEARARIEELI 113
Q A+ I + +
Sbjct: 459 QAAQYLITQRV 469
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNA 111
Query: 105 ARARIEELI 113
I E I
Sbjct: 112 VHGFIAEKI 120
Score = 43.5 bits (101), Expect = 0.028, Method: Composition-based stats.
Identities = 23/79 (29%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
+++ VP + G++IGKGG +K + ++GA VQ Q + + +R +SG P+Q ++A
Sbjct: 150 VKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 209
Query: 106 RARIEELIDSVMVEQFSGA 124
+E ++ + + SG+
Sbjct: 210 ---VELIVQKIQEDPQSGS 225
>gi|426216608|ref|XP_004002553.1| PREDICTED: tudor and KH domain-containing protein isoform 1 [Ovis
aries]
Length = 560
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I++ VP+ AV ++IG+ G IK+L+ +TGAR+ ED +R ++SG P QV +A+
Sbjct: 55 IEMRVPQEAVKLIIGRQGANIKQLRKKTGARIDVDT--EDIGDERVLLISGFPVQVCKAK 112
Query: 107 ARIEELI--DSVMVEQFS 122
A I +++ ++ + EQ S
Sbjct: 113 AAIHQILTENTPVSEQLS 130
>gi|348586650|ref|XP_003479081.1| PREDICTED: tudor and KH domain-containing protein-like isoform 1
[Cavia porcellus]
Length = 560
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I++ VP+ AV ++IG+ G IK+L+ +TGAR+ ED +R ++SG P QV +A+
Sbjct: 55 IEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDT--EDIGDERVLLISGFPVQVCKAK 112
Query: 107 ARIEELI--DSVMVEQFS 122
A I +++ ++ + EQ S
Sbjct: 113 AAIHQILTENTPVSEQLS 130
>gi|393909303|gb|EJD75396.1| hypothetical protein LOAG_17442 [Loa loa]
Length = 585
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 38/53 (71%), Gaps = 2/53 (3%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSG 97
++V +P AAVG +IGKGG+ ++ L++E+G R+Q + +E P ++R C++ G
Sbjct: 58 VKVLIPSAAVGALIGKGGETMRNLKSESGCRLQMSKNQEVYPGTNERICLVKG 110
>gi|71895775|ref|NP_001025686.1| neuro-oncological ventral antigen 2 [Xenopus (Silurana) tropicalis]
gi|62205009|gb|AAH93475.1| neuro-oncological ventral antigen 2 [Xenopus (Silurana) tropicalis]
Length = 413
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ GS + +
Sbjct: 36 LKVLIPSYAAGSIIGKGGQTIVQLQRETGATIKLSKSKDFYPGTTERVCLVQGSAESLLS 95
Query: 105 ARARIEELIDSV 116
I E + V
Sbjct: 96 VHNFIAEKVREV 107
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
E +++ VP+ VG ++GKGG + + Q TGAR+Q + E P R+ ++G P
Sbjct: 328 ETLEMAVPETLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRSRKVTITGPPGAT 387
Query: 103 QEARARI 109
Q A+ I
Sbjct: 388 QAAQYLI 394
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEA 105
++ VP G++IGKGG ++ + E+GA VQ Q + P+ +R +SG P QVQ+A
Sbjct: 135 KLIVPNTTAGLIIGKGGATVRSIMEESGAWVQLSQ-KPAGPNLHERVVTVSGEPSQVQKA 193
>gi|195388678|ref|XP_002053006.1| GJ23641 [Drosophila virilis]
gi|194151092|gb|EDW66526.1| GJ23641 [Drosophila virilis]
Length = 574
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGS 98
+++ VP A G +IGKGG+ I LQ +TGARV+ + + P ++R C+++GS
Sbjct: 68 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGS 121
Score = 43.9 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 31/48 (64%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM 94
+++ VP + G++IGKGG IK+++ E+G+ VQ Q +D RC+
Sbjct: 161 VKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPKDVSLQERCI 208
>gi|426243970|ref|XP_004015811.1| PREDICTED: RNA-binding protein Nova-2 [Ovis aries]
Length = 255
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 16 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 75
Query: 105 ARARIEE 111
+ I E
Sbjct: 76 VHSFIAE 82
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEAR 106
++ VP + G++IGKGG +K + ++GA VQ Q E + +R +SG P+QV +A
Sbjct: 115 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAV 174
Query: 107 ARI 109
+ I
Sbjct: 175 SAI 177
>gi|74177637|dbj|BAE38921.1| unnamed protein product [Mus musculus]
Length = 464
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 376 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 434
Query: 93 CMLSGSPDQVQEAR 106
++G+ DQ+Q A+
Sbjct: 435 ITITGTQDQIQNAQ 448
>gi|308489141|ref|XP_003106764.1| hypothetical protein CRE_16715 [Caenorhabditis remanei]
gi|308253418|gb|EFO97370.1| hypothetical protein CRE_16715 [Caenorhabditis remanei]
Length = 751
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 42/69 (60%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+QV VP++ VG ++G G IKKL +ETG ++QF+ + +R + G+ +V A
Sbjct: 246 LQVKVPRSTVGAIMGVQGATIKKLSDETGTKIQFLPDDDTKLMERSLAIIGNRSKVYVAA 305
Query: 107 ARIEELIDS 115
I++++DS
Sbjct: 306 QLIKQIVDS 314
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 38/59 (64%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARI 109
+P + G+VIG+GG++IK++ E+GA V+ + DP ++ ++ GS QV+ A+ I
Sbjct: 330 IPASKCGLVIGRGGEVIKQINAESGAHVELSREANKDPLEKTFVIRGSDIQVEHAKHLI 388
Score = 39.7 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
+P+ VG+VIG+ G I + +G RVQ V + R + G PD++ AR I
Sbjct: 67 IPEQCVGLVIGRNGSEIHSISQRSGCRVQ-VTTEPTNTGYRIVEIYGVPDKISRARDLIN 125
Query: 111 ELI 113
E+I
Sbjct: 126 EVI 128
>gi|126330639|ref|XP_001363707.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Monodelphis domestica]
gi|395515329|ref|XP_003761858.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K [Sarcophilus
harrisii]
Length = 471
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 383 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 441
Query: 93 CMLSGSPDQVQEAR 106
++G+ DQ+Q A+
Sbjct: 442 ITITGTQDQIQNAQ 455
>gi|355707685|gb|AES03033.1| neuro-oncological ventral antigen 2 [Mustela putorius furo]
Length = 171
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 7 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 66
Query: 105 ARARIEE 111
+ I E
Sbjct: 67 VHSFIAE 73
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEAR 106
++ VP + G++IGKGG +K + ++GA VQ Q E + +R +SG P+QV +A
Sbjct: 106 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAV 165
Query: 107 ARI 109
+ I
Sbjct: 166 SAI 168
>gi|61369343|gb|AAX43320.1| heterogeneous nuclear ribonucleoprotein K [synthetic construct]
Length = 465
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 376 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 434
Query: 93 CMLSGSPDQVQEAR 106
++G+ DQ+Q A+
Sbjct: 435 ITITGTQDQIQNAQ 448
>gi|59381084|gb|AAW84289.1| heterogeneous nuclear ribonucleoprotein K transcript variant [Homo
sapiens]
Length = 464
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 376 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 434
Query: 93 CMLSGSPDQVQEAR 106
++G+ DQ+Q A+
Sbjct: 435 ITITGTQDQIQNAQ 448
>gi|375065844|ref|NP_001243477.1| heterogeneous nuclear ribonucleoprotein K [Canis lupus familiaris]
Length = 464
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 376 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 434
Query: 93 CMLSGSPDQVQEAR 106
++G+ DQ+Q A+
Sbjct: 435 ITITGTQDQIQNAQ 448
>gi|354499998|ref|XP_003512090.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 1
[Cricetulus griseus]
Length = 464
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 376 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 434
Query: 93 CMLSGSPDQVQEAR 106
++G+ DQ+Q A+
Sbjct: 435 ITITGTQDQIQNAQ 448
>gi|367036220|ref|XP_003667392.1| hypothetical protein MYCTH_2313192 [Myceliophthora thermophila ATCC
42464]
gi|347014665|gb|AEO62147.1| hypothetical protein MYCTH_2313192 [Myceliophthora thermophila ATCC
42464]
Length = 563
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 2/99 (2%)
Query: 18 RNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGAR 77
RN +N R + G GG + + I VP AVG++IGKGG+ I+++QN TG +
Sbjct: 375 RNGNNPAGGRGGRNDHFGSGGGHDKVNDSI--YVPSDAVGMIIGKGGETIREMQNVTGCK 432
Query: 78 VQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELIDSV 116
+ Q +R L G+ + + +A+ IE+ +D+
Sbjct: 433 INVSQSSGPGEVEREIGLVGTREAIAQAKRAIEDKVDAA 471
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
+ +Q+ VP VG++IG+GG+ I+ LQ +G + V + R L GSP +
Sbjct: 302 DSLQIMVPDRTVGLIIGRGGETIRDLQERSGCHINIVSENKSVNGLRPVNLIGSPAAARH 361
Query: 105 ARARIEELIDS 115
A+ I E++DS
Sbjct: 362 AKELILEIVDS 372
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 56 VGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELI-D 114
VG++IG+ G+ ++++++E+ RVQF+ + R C ++G Q +EA+ I +I D
Sbjct: 212 VGLIIGRQGENLRRVESESRCRVQFIPPTGQNDQFRLCRITGPRPQREEAKEMINNIIRD 271
Query: 115 SVM 117
S M
Sbjct: 272 SGM 274
>gi|473912|gb|AAA21731.1| phosphoprotein [Mus cookii]
Length = 464
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 376 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 434
Query: 93 CMLSGSPDQVQEAR 106
++G+ DQ+Q A+
Sbjct: 435 ITITGTQDQIQNAQ 448
>gi|194383878|dbj|BAG59297.1| unnamed protein product [Homo sapiens]
Length = 300
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%)
Query: 15 GIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNET 74
+ ++ F ++ ++ G E++ + +P AVG +IGK G IK+L
Sbjct: 99 AVNTHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFA 158
Query: 75 GARVQFVQMREDDPSDRRCMLSGSPDQVQEARARI 109
GA ++ D S+R +++G P+ +A+ RI
Sbjct: 159 GASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 193
>gi|30680512|ref|NP_850764.1| binding to TOMV RNA 1L (long form) protein [Arabidopsis thaliana]
gi|332003360|gb|AED90743.1| binding to TOMV RNA 1L (long form) protein [Arabidopsis thaliana]
Length = 334
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
I+ V AA G VIGKGG I + Q ++GAR+Q + +E P +DR M+SGS ++E
Sbjct: 37 IRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTTDRIIMISGS---IKE 93
Query: 105 ARARIEELIDSVMVE 119
+E ++D + E
Sbjct: 94 VVNGLELILDKLHSE 108
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 30 NENGDGRGGMW----EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRE 85
N +G GG + E + + V +G+V+G+GG I ++ TGAR++ + R
Sbjct: 236 NYAPNGSGGKYQNHKEEASTTVTIGVADEHIGLVLGRGGRNIMEITQMTGARIK-ISDRG 294
Query: 86 D---DPSDRRCMLSGSPDQVQEARARIEELIDSV 116
D +DR+ ++G +Q+A I++ +DS
Sbjct: 295 DFMSGTTDRKVSITGPQRAIQQAETMIKQKVDSA 328
>gi|281337729|gb|EFB13313.1| hypothetical protein PANDA_003005 [Ailuropoda melanoleuca]
Length = 453
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 376 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 434
Query: 93 CMLSGSPDQVQEAR 106
++G+ DQ+Q A+
Sbjct: 435 ITITGTQDQIQNAQ 448
>gi|119583084|gb|EAW62680.1| heterogeneous nuclear ribonucleoprotein K, isoform CRA_f [Homo
sapiens]
Length = 440
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 352 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 410
Query: 93 CMLSGSPDQVQEAR 106
++G+ DQ+Q A+
Sbjct: 411 ITITGTQDQIQNAQ 424
>gi|242058519|ref|XP_002458405.1| hypothetical protein SORBIDRAFT_03g032870 [Sorghum bicolor]
gi|241930380|gb|EES03525.1| hypothetical protein SORBIDRAFT_03g032870 [Sorghum bicolor]
Length = 343
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEAR 106
+ VP + VGV+IGK G+ I+ LQ +GA +Q + + D + R +L G P V +A
Sbjct: 159 IEVPNSKVGVLIGKAGETIRNLQKSSGAWIQIAKHADVDSNALTRSVLLVGKPGSVDKA- 217
Query: 107 ARIEELIDSVMVEQFSGANF 126
E+LI+SV+ E + F
Sbjct: 218 ---EQLIESVIAEAEAARGF 234
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 26/37 (70%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFV 81
E + VP +G++IGK G+ IK LQ ++GAR++F+
Sbjct: 242 EQFDMAVPNNKIGLIIGKRGETIKDLQLKSGARIEFI 278
>gi|195037250|ref|XP_001990077.1| GH18435 [Drosophila grimshawi]
gi|193894273|gb|EDV93139.1| GH18435 [Drosophila grimshawi]
Length = 569
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGS 98
+++ VP A G +IGKGG+ I LQ +TGARV+ + + P ++R C+++GS
Sbjct: 68 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGS 121
Score = 43.9 bits (102), Expect = 0.021, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 31/48 (64%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM 94
+++ VP + G++IGKGG IK+++ E+G+ VQ Q +D RC+
Sbjct: 161 VKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPKDVSLQERCI 208
>gi|426343191|ref|XP_004038198.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
[Gorilla gorilla gorilla]
Length = 376
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%)
Query: 15 GIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNET 74
+ ++ F ++ ++ G E++ + +P AVG +IGK G IK+L
Sbjct: 175 AVNTHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFA 234
Query: 75 GARVQFVQMREDDPSDRRCMLSGSPDQVQEARARI 109
GA ++ D S+R +++G P+ +A+ RI
Sbjct: 235 GASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRI 269
>gi|348519761|ref|XP_003447398.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 3 [Oreochromis niloticus]
Length = 588
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 39/65 (60%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
EV+ + +P AVG +IGK G IK+L + GA ++ D ++R +++G+P+ +
Sbjct: 415 EVVYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAESPDVTERMVIITGTPEAQFK 474
Query: 105 ARARI 109
A+ RI
Sbjct: 475 AQGRI 479
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM-LSGSPDQVQEARARI 109
VP +A G VIGKGG + +LQN T A V + + D +D + +SG Q A+ +I
Sbjct: 503 VPSSAAGRVIGKGGKTVNELQNLTSAEVIVPRDQTPDENDEVFVKISGHFFASQTAQRKI 562
Query: 110 EELIDSVMVEQ 120
E+I V ++
Sbjct: 563 REIIQQVKQQE 573
>gi|26354208|dbj|BAC40732.1| unnamed protein product [Mus musculus]
Length = 869
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 59 VIGKGGDMIKKLQNETGARVQFVQMREDDPSDR--RCMLSGSPDQVQEARARIEELIDSV 116
VIGKGG+ IKK+ +TG + F ++ +++ + ++G P V+ ARARI EL+ V
Sbjct: 67 VIGKGGNNIKKVMEDTGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVESARARIRELLPLV 126
Query: 117 MV 118
++
Sbjct: 127 LM 128
>gi|340722907|ref|XP_003399841.1| PREDICTED: tudor and KH domain-containing protein-like [Bombus
terrestris]
Length = 609
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I+ VP+ V VIG+GG MIK +QN+TG ++ F + + P +R C++ GS + V A
Sbjct: 52 IECKVPRQFVPAVIGRGGSMIKDIQNKTGTQLYFKEDNIECP-ERVCIIKGSYESVYLAE 110
Query: 107 ARIEELI 113
I+ +I
Sbjct: 111 NMIKSII 117
>gi|384487866|gb|EIE80046.1| hypothetical protein RO3G_04751 [Rhizopus delemar RA 99-880]
Length = 401
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 55/107 (51%), Gaps = 3/107 (2%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
Q ++R + I + N R +++ G G G + I V +P VG++IG+GG+
Sbjct: 145 QHAKRLIEEIVYGSPNLAAPR-YSQYGLGHPG--NPNDQRIYVPIPTTVVGLIIGRGGET 201
Query: 67 IKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELI 113
I+ Q ++GARV+ + + +R ++G P + A+ +EE +
Sbjct: 202 IRYFQEQSGARVKVDLTGDPNAEERNVCITGEPQALAVAKRLVEEKV 248
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 56 VGVVIGKGGDMIKKLQNETG-ARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
VG++IGKGG+ +KK++ +G ++VQF Q + +R L G DQ+ +AR I +++D
Sbjct: 2 VGLLIGKGGENLKKIERSSGVSKVQFAQ--DTSGPERIVYLVGESDQISKARDMIRQMVD 59
Query: 115 SVMVEQFS 122
+ S
Sbjct: 60 DAKANEAS 67
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM-LSGSPDQVQEA 105
I++ VPK VG+VIG+GG+ I++ + ++ A++ +D ++ R + L G VQ A
Sbjct: 90 IRIPVPK--VGLVIGRGGETIREFEQQSRAKILLPSDSSNDVNNERVITLIGDDAAVQHA 147
Query: 106 RARIEELI 113
+ IEE++
Sbjct: 148 KRLIEEIV 155
>gi|47221037|emb|CAG12731.1| unnamed protein product [Tetraodon nigroviridis]
Length = 412
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 39 MWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLS 96
+ E EV+++ VP+ VG ++GKGG + + Q TGAR+Q + E P +R+ ++
Sbjct: 321 LAEGAKEVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTIT 380
Query: 97 GSPDQVQEARARIEELID 114
GS Q A+ I + I
Sbjct: 381 GSQAATQAAQYLISQRIT 398
Score = 40.0 bits (92), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
++ VP + G++IGKGG +K + ++GA VQ Q E + +R +SG P+Q ++A
Sbjct: 74 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTISGEPEQNRKA 132
>gi|348519763|ref|XP_003447399.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 4 [Oreochromis niloticus]
Length = 584
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 39/65 (60%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
EV+ + +P AVG +IGK G IK+L + GA ++ D ++R +++G+P+ +
Sbjct: 411 EVVYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAESPDVTERMVIITGTPEAQFK 470
Query: 105 ARARI 109
A+ RI
Sbjct: 471 AQGRI 475
Score = 40.8 bits (94), Expect = 0.20, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM-LSGSPDQVQEARARI 109
VP +A G VIGKGG + +LQN T A V + + D +D + +SG Q A+ +I
Sbjct: 499 VPSSAAGRVIGKGGKTVNELQNLTSAEVIVPRDQTPDENDEVFVKISGHFFASQTAQRKI 558
Query: 110 EELIDSVMVEQ 120
E+I V ++
Sbjct: 559 REIIQQVKQQE 569
>gi|395535957|ref|XP_003769987.1| PREDICTED: tudor and KH domain-containing protein [Sarcophilus
harrisii]
Length = 577
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+++ VP+ AV ++IG+ G IK+L+ +TGAR+ ED +R ++SG P QV +A+
Sbjct: 63 VEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDT--EDVGEERVLLISGFPVQVCKAK 120
Query: 107 ARIEELI--DSVMVEQFS 122
A I +++ ++ + EQ S
Sbjct: 121 AAIHQILTENTPVYEQLS 138
>gi|449667206|ref|XP_002160219.2| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Hydra
magnipapillata]
Length = 393
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 58/112 (51%), Gaps = 9/112 (8%)
Query: 21 DNFGNMREFNENGDGRGG---MWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGAR 77
+N + +FN G G GG + + QV +P G +IG+GG+ I+ ++ +GA
Sbjct: 288 NNSQSFNDFNSQGSGNGGDSIFGQGDIQTTQVTIPNDLAGAIIGRGGERIRNIRQRSGAD 347
Query: 78 VQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELIDSVMVEQFSGANFDKL 129
++ +Q + +DR ++G+ DQ+Q + +++ V Q+SG +L
Sbjct: 348 IK-IQDPGEGKNDRVITITGTQDQIQYGQFLMQQ-----SVRQYSGKKGGQL 393
>gi|221060388|ref|XP_002260839.1| RNA-binding protein [Plasmodium knowlesi strain H]
gi|193810913|emb|CAQ42811.1| RNA-binding protein, putative [Plasmodium knowlesi strain H]
Length = 334
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 39 MWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGS 98
M V ++ +PK+A +IGKGG IK+LQ+ TGA++Q + RED ++R + G
Sbjct: 101 MNTVPKYTCRIVIPKSAASAIIGKGGQQIKQLQDSTGAKIQ-ISSREDGLNERIISIIGP 159
Query: 99 PDQVQEARARIEELI 113
+ + + ++ I
Sbjct: 160 FESISDTAIKVTNSI 174
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
I + +P +G VIGK G + + N TGA+++ + E P +DR+ + G+ V
Sbjct: 250 ISIQIPDEFIGSVIGKNGSRLTNIMNSTGAQIRISRKGELIPGTADRKVRIMGTVAAVHG 309
Query: 105 ARARIEELIDSVMVE 119
A + + ++SV ++
Sbjct: 310 AHVLLLQRLESVYMQ 324
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
Query: 48 QVCVPKAAV-----GVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPD 100
Q+C K V G VIGK G +I ++N+TG ++ P+ +R +L G +
Sbjct: 15 QLCFVKMLVNNLVAGSVIGKNGSIITSIENKTGCSLKLSPTNSYFPNTQERVLVLCGKQE 74
Query: 101 QVQEARARIEELIDSVMVEQF 121
Q+ A I + I + V+ F
Sbjct: 75 QINNALLIILDKIRQITVQSF 95
>gi|417402763|gb|JAA48217.1| Putative kinase anchor protein [Desmodus rotundus]
Length = 561
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I++ VP+ AV ++IG+ G IK+L+ +TGAR+ ED +R ++SG P QV +A+
Sbjct: 55 IEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDT--EDVGDERVLLISGFPVQVCKAK 112
Query: 107 ARIEELI--DSVMVEQFS 122
A I +++ ++ + EQ S
Sbjct: 113 AAIHQILTENAPVSEQLS 130
>gi|291397996|ref|XP_002715590.1| PREDICTED: CG7082-like [Oryctolagus cuniculus]
Length = 554
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+++ VP+ AV ++IG+ G IK+L+ +TGAR+ ED +R ++SG P QV +A+
Sbjct: 55 VEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDT--EDVGDERVLLISGFPVQVCKAK 112
Query: 107 ARIEELI--DSVMVEQFS 122
A I +L+ ++ + EQ S
Sbjct: 113 AAIHQLLTENTPVSEQLS 130
>gi|312380039|gb|EFR26147.1| hypothetical protein AND_07973 [Anopheles darlingi]
Length = 552
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQV 102
VP A G +IGKGG+ I LQ + GARV+ + + P ++R C++SG+ D +
Sbjct: 47 VPSVAAGAIIGKGGETIASLQKDAGARVKMSKSHDFYPGTTERVCLISGTVDGI 100
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 30/48 (62%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM 94
+++ VP + G++IGK G IK+++ E+G+ VQ Q +D RC+
Sbjct: 136 VKILVPNSTAGMIIGKAGAYIKQIKEESGSYVQISQKPKDLTLQERCI 183
>gi|410968376|ref|XP_003990683.1| PREDICTED: tudor and KH domain-containing protein [Felis catus]
Length = 562
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I++ VP+ A+ ++IG+ G IK+L+ +TGAR+ ED +R ++SG P QV +A+
Sbjct: 55 IEMRVPQEAIKLIIGRQGANIKQLRKQTGARIDVDT--EDVGDERVLLISGFPVQVCKAK 112
Query: 107 ARIEELI--DSVMVEQFS 122
A I +++ ++ + EQ S
Sbjct: 113 AAIHQILTENTPVSEQLS 130
>gi|403345886|gb|EJY72325.1| KH domain containing protein [Oxytricha trifallax]
Length = 794
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 5/69 (7%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFV-----QMREDDPSDRRCMLSGSPDQVQEA 105
VP VG++IGKGGD I+++Q ++GARVQ Q + R + GS ++ ++A
Sbjct: 332 VPNECVGLIIGKGGDTIRQIQLKSGARVQVAKKQIPQSQMPGAQMRNVFIEGSLEKYEKA 391
Query: 106 RARIEELID 114
+ IEE+++
Sbjct: 392 KKLIEEIVE 400
>gi|324553126|gb|ADY49786.1| Far upstream element-binding protein 1, partial [Ascaris suum]
Length = 103
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 37/57 (64%)
Query: 58 VVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
++IGKGG+ IK+L E+GA++QF + DR ++ G+ +Q+ +A I EL++
Sbjct: 1 MIIGKGGETIKRLAAESGAKIQFKPDEDQTTPDRCAVIQGTTEQIAKATQFISELVN 57
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 6/51 (11%)
Query: 30 NENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQF 80
N++G G G E+ + VP G+VIGKGG+ IK++ E+GA V+
Sbjct: 57 NKSGAGSGA------EIFYMHVPANKTGLVIGKGGETIKQICAESGAHVEL 101
>gi|348519759|ref|XP_003447397.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 2 [Oreochromis niloticus]
Length = 581
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 39/65 (60%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
EV+ + +P AVG +IGK G IK+L + GA ++ D ++R +++G+P+ +
Sbjct: 408 EVVYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAESPDVTERMVIITGTPEAQFK 467
Query: 105 ARARI 109
A+ RI
Sbjct: 468 AQGRI 472
Score = 40.4 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM-LSGSPDQVQEARARI 109
VP +A G VIGKGG + +LQN T A V + + D +D + +SG Q A+ +I
Sbjct: 496 VPSSAAGRVIGKGGKTVNELQNLTSAEVIVPRDQTPDENDEVFVKISGHFFASQTAQRKI 555
Query: 110 EELIDSVMVEQ 120
E+I V ++
Sbjct: 556 REIIQQVKQQE 566
>gi|449437587|ref|XP_004136573.1| PREDICTED: zinc finger CCCH domain-containing protein 14-like
[Cucumis sativus]
Length = 296
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
++ V + G +IGKGG K++ TGA++ ++ E DP+ R L GS DQ++E
Sbjct: 169 STAKISVDASLAGAIIGKGGINSKQICRRTGAKLS-IRDHESDPNLRNIELEGSFDQIKE 227
Query: 105 ARARIEELIDSV 116
A A ++ELI +V
Sbjct: 228 ASAMVQELIVTV 239
>gi|47219921|emb|CAF97191.1| unnamed protein product [Tetraodon nigroviridis]
Length = 339
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 36 RGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRC 93
RG ++ VI QV +PK G +IGKGG IK++++E GA ++ + E DR
Sbjct: 262 RGSYSDIGGPVITTQVTIPKDLAGSIIGKGGQRIKQIRHECGASIKIDEPLEGS-EDRII 320
Query: 94 MLSGSPDQVQEARARIE 110
++G+ DQ+Q A+ ++
Sbjct: 321 TITGTQDQIQNAQYLLQ 337
>gi|449514357|ref|XP_002192510.2| PREDICTED: heterogeneous nuclear ribonucleoprotein K [Taeniopygia
guttata]
Length = 434
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 346 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 404
Query: 93 CMLSGSPDQVQEAR 106
++G+ DQ+Q A+
Sbjct: 405 ITITGTQDQIQNAQ 418
>gi|402860705|ref|XP_003894763.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 4 [Papio anubis]
Length = 542
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 37/65 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
EV+ + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 371 EVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 430
Query: 105 ARARI 109
A+ RI
Sbjct: 431 AQGRI 435
>gi|402860703|ref|XP_003894762.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Papio anubis]
Length = 536
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 37/65 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
EV+ + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 365 EVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 424
Query: 105 ARARI 109
A+ RI
Sbjct: 425 AQGRI 429
>gi|297810533|ref|XP_002873150.1| hypothetical protein ARALYDRAFT_487225 [Arabidopsis lyrata subsp.
lyrata]
gi|297318987|gb|EFH49409.1| hypothetical protein ARALYDRAFT_487225 [Arabidopsis lyrata subsp.
lyrata]
Length = 334
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
I+ V AA G VIGKGG I + Q ++GAR+Q + +E P +DR M+SGS ++E
Sbjct: 37 IRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTTDRIIMISGS---IKE 93
Query: 105 ARARIEELIDSVMVE 119
+E ++D + E
Sbjct: 94 VINGLELILDKLHSE 108
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 30 NENGDGRGGMWE----VTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRE 85
N +G GG ++ + + V +G+V+G+GG I ++ TGAR++ + R
Sbjct: 236 NYAPNGSGGKYQNHKDEASTTVTIGVADEHIGLVLGRGGRNIMEITQITGARIK-ISDRG 294
Query: 86 D---DPSDRRCMLSGSPDQVQEARARIEELIDSV 116
D +DR+ ++G +Q+A I++ +DS
Sbjct: 295 DFMSGTTDRKVSITGPQRAIQQAETMIKQKVDSA 328
>gi|387018122|gb|AFJ51179.1| Heterogeneous nuclear ribonucleoprotein K-like [Crotalus
adamanteus]
Length = 426
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 338 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 396
Query: 93 CMLSGSPDQVQEAR 106
++G+ DQ+Q A+
Sbjct: 397 ITITGTQDQIQNAQ 410
>gi|363744462|ref|XP_425032.2| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 2
[Gallus gallus]
Length = 430
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 342 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 400
Query: 93 CMLSGSPDQVQEAR 106
++G+ DQ+Q A+
Sbjct: 401 ITITGTQDQIQNAQ 414
>gi|348537889|ref|XP_003456425.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Oreochromis
niloticus]
Length = 496
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
EV+++ VP+ VG ++GKGG + + Q TGAR+Q + E P +R+ ++GS
Sbjct: 411 EVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSQAAT 470
Query: 103 QEARARIEELI 113
Q A+ I + I
Sbjct: 471 QAAQYLISQRI 481
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNG 94
Query: 105 ARARIEELI 113
I E +
Sbjct: 95 VHDFIAEKV 103
Score = 42.4 bits (98), Expect = 0.065, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
++ VP + G++IGKGG +K + ++GA VQ Q E + +R +SG P+Q ++A
Sbjct: 158 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTISGEPEQNRKA 216
>gi|449526573|ref|XP_004170288.1| PREDICTED: zinc finger CCCH domain-containing protein 14-like
[Cucumis sativus]
Length = 271
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
++ V + G +IGKGG K++ TGA++ ++ E DP+ R L GS DQ++E
Sbjct: 144 STAKISVDASLAGAIIGKGGINSKQICRRTGAKLS-IRDHESDPNLRNIELEGSFDQIKE 202
Query: 105 ARARIEELIDSV 116
A A ++ELI +V
Sbjct: 203 ASAMVQELIVTV 214
>gi|159162602|pdb|1KHM|A Chain A, C-Terminal Kh Domain Of Hnrnp K (Kh3)
Length = 89
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 6/79 (7%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
QV +PK +IGKGG IK++++E+GA ++ + E DR ++G+ DQ+Q A+
Sbjct: 17 QVTIPKDLARSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRIITITGTQDQIQNAQY 75
Query: 108 RIEELIDSVMVEQFSGANF 126
++ V+Q+SG F
Sbjct: 76 LLQN-----SVKQYSGKFF 89
>gi|392347947|ref|XP_003749978.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Rattus
norvegicus]
Length = 463
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 8/94 (8%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E D
Sbjct: 376 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDWI 434
Query: 93 CMLSGSPDQVQEARARIEELIDSVMVEQFSGANF 126
++G+ DQ+Q A+ ++ V+Q+SG F
Sbjct: 435 ITITGTQDQIQNAQYLLQN-----SVKQYSGKFF 463
>gi|345305872|ref|XP_003428391.1| PREDICTED: protein bicaudal C homolog 1-like [Ornithorhynchus
anatinus]
Length = 1128
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 59 VIGKGGDMIKKLQNETGARVQFVQMREDDPSDR--RCMLSGSPDQVQEARARIEELIDSV 116
VIGKGG+ IKK+ ETG + F ++ +++ + ++G P V+ AR RI EL+ V
Sbjct: 363 VIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVESARVRIRELLPLV 422
Query: 117 MV 118
++
Sbjct: 423 LM 424
>gi|301615382|ref|XP_002937153.1| PREDICTED: protein bicaudal C homolog 1-B [Xenopus (Silurana)
tropicalis]
Length = 835
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 59 VIGKGGDMIKKLQNETGARVQFVQMREDDPSDR--RCMLSGSPDQVQEARARIEELIDSV 116
VIGKGG+ IKK+ ETG + F ++ +++ + ++G P V+ AR RI EL+ V
Sbjct: 139 VIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVESARVRIRELLPLV 198
Query: 117 MV 118
++
Sbjct: 199 LM 200
>gi|443685583|gb|ELT89137.1| hypothetical protein CAPTEDRAFT_171528 [Capitella teleta]
Length = 398
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 14/80 (17%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP----SDRRCMLSGSPDQVQ 103
QV +PK G +IGKGG I++++ E+GA + D+P DR ++GS DQ+Q
Sbjct: 327 QVSIPKDLAGAIIGKGGSRIRQIRQESGAGINI-----DEPMQGSQDRIITITGSQDQIQ 381
Query: 104 EARARIEELIDSVMVEQFSG 123
A+ ++ + V+Q+SG
Sbjct: 382 NAQYLLQ-----MSVKQYSG 396
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 50 CVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARI 109
+ ++ G VIG+GG+ IK+L++ETGA+++ S+R L+G P V + A I
Sbjct: 109 LIHQSQAGCVIGRGGNKIKELRDETGAQIKVYSQCAPQSSERIVQLTGKPRVVVNSLATI 168
Query: 110 EELIDSVMVEQFSGA----NFDKLRS 131
+L+ + + F+ NFD+ +
Sbjct: 169 FDLLQTAPPKGFNNPYDPNNFDEFYA 194
>gi|15237716|ref|NP_196063.1| binding to TOMV RNA 1L (long form) protein [Arabidopsis thaliana]
gi|14030641|gb|AAK52995.1|AF375411_1 AT5g04430/T32M21_30 [Arabidopsis thaliana]
gi|7406447|emb|CAB85549.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|21554568|gb|AAM63617.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|23507775|gb|AAN38691.1| At5g04430/T32M21_30 [Arabidopsis thaliana]
gi|332003361|gb|AED90744.1| binding to TOMV RNA 1L (long form) protein [Arabidopsis thaliana]
Length = 313
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
I+ V AA G VIGKGG I + Q ++GAR+Q + +E P +DR M+SGS ++E
Sbjct: 37 IRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTTDRIIMISGS---IKE 93
Query: 105 ARARIEELIDSVMVE 119
+E ++D + E
Sbjct: 94 VVNGLELILDKLHSE 108
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 52/113 (46%), Gaps = 8/113 (7%)
Query: 11 RWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWE----VIQVCVPKAAVGVVIGKGGDM 66
+ Q + N +G GG ++ E + + V +G+V+G+GG
Sbjct: 196 HYSQNVHSPYSYAAGYNSVNYAPNGSGGKYQNHKEEASTTVTIGVADEHIGLVLGRGGRN 255
Query: 67 IKKLQNETGARVQFVQMRED---DPSDRRCMLSGSPDQVQEARARIEELIDSV 116
I ++ TGAR++ + R D +DR+ ++G +Q+A I++ +DS
Sbjct: 256 IMEITQMTGARIK-ISDRGDFMSGTTDRKVSITGPQRAIQQAETMIKQKVDSA 307
>gi|344254646|gb|EGW10750.1| Tudor and KH domain-containing protein [Cricetulus griseus]
Length = 584
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I++ VP+ AV ++IG+ G IK+L+ +TGAR+ ED +R ++SG P QV +A+
Sbjct: 18 IEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDT--EDVGDERVLLISGFPVQVCKAK 75
Query: 107 ARIEELI 113
A I +++
Sbjct: 76 AAIHQIL 82
>gi|148700013|gb|EDL31960.1| bicaudal C homolog 1 (Drosophila), isoform CRA_a [Mus musculus]
Length = 900
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 59 VIGKGGDMIKKLQNETGARVQFVQMREDDPSDR--RCMLSGSPDQVQEARARIEELIDSV 116
VIGKGG+ IKK+ +TG + F ++ +++ + ++G P V+ ARARI EL+ V
Sbjct: 98 VIGKGGNNIKKVMEDTGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVESARARIRELLPLV 157
Query: 117 MV 118
++
Sbjct: 158 LM 159
>gi|148700014|gb|EDL31961.1| bicaudal C homolog 1 (Drosophila), isoform CRA_b [Mus musculus]
Length = 973
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 59 VIGKGGDMIKKLQNETGARVQFVQMREDDPSDR--RCMLSGSPDQVQEARARIEELIDSV 116
VIGKGG+ IKK+ +TG + F ++ +++ + ++G P V+ ARARI EL+ V
Sbjct: 171 VIGKGGNNIKKVMEDTGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVESARARIRELLPLV 230
Query: 117 MV 118
++
Sbjct: 231 LM 232
>gi|148222025|ref|NP_001090223.1| neuro-oncological ventral antigen 2 [Xenopus laevis]
gi|49256115|gb|AAH72959.1| Nova1 protein [Xenopus laevis]
Length = 413
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ GS + +
Sbjct: 36 LKVLIPSYAAGSIIGKGGQTIVQLQRETGATIKLSKSKDFYPGTTERVCLVQGSAEALLS 95
Query: 105 ARARIEELIDSV 116
I E + V
Sbjct: 96 VHNFIAEKVREV 107
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
E +++ VP+ VG ++GKGG + + Q TGAR+Q + E P R+ ++G P
Sbjct: 328 ETLEMAVPETLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRSRKVTITGPPGAT 387
Query: 103 QEARARI 109
Q A+ I
Sbjct: 388 QAAQYLI 394
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRE-DDPSDRRCMLSGSPDQVQEA 105
++ VP G++IGKGG ++ + E+GA VQ Q + +R +SG P QVQ+A
Sbjct: 135 KLIVPNTTAGLIIGKGGATVRNIMEESGAWVQLSQKPAGSNLHERVVTVSGEPSQVQKA 193
>gi|358335626|dbj|GAA29562.2| RNA-binding protein Nova [Clonorchis sinensis]
Length = 673
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQEA 105
++ VP A G +IGKGG+ I +QN+T A+V+ + + P ++R C++ G+ D +
Sbjct: 31 KILVPSIAAGAIIGKGGEAITDIQNKTSAKVKMSKANDFYPGTTERVCLIVGTIDSILRV 90
Query: 106 RARIEELI 113
I E I
Sbjct: 91 FQYISEKI 98
Score = 42.0 bits (97), Expect = 0.076, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM-LSGSPDQVQEA 105
+++ VP + G++IGKGG IK+++ TG +Q Q ++ RC+ ++G Q EA
Sbjct: 123 VKILVPNSTAGIIIGKGGSFIKEVKESTGVFIQVSQKSKELNLAERCVTVAGELPQTFEA 182
>gi|301784332|ref|XP_002927581.1| PREDICTED: protein bicaudal C homolog 1-like [Ailuropoda
melanoleuca]
Length = 905
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 59 VIGKGGDMIKKLQNETGARVQFVQMREDDPSDR--RCMLSGSPDQVQEARARIEELIDSV 116
VIGKGG+ IKK+ ETG + F ++ +++ + ++G P V+ AR RI EL+ V
Sbjct: 78 VIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVESARVRIRELLPLV 137
Query: 117 MV 118
++
Sbjct: 138 LM 139
>gi|109042328|ref|XP_001095336.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 5 [Macaca mulatta]
gi|402860699|ref|XP_003894760.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Papio anubis]
Length = 599
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 37/65 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
EV+ + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 428 EVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 487
Query: 105 ARARI 109
A+ RI
Sbjct: 488 AQGRI 492
>gi|348537887|ref|XP_003456424.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Oreochromis
niloticus]
Length = 496
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
EV+++ VP+ VG ++GKGG + + Q TGAR+Q + E P +R+ ++GS
Sbjct: 411 EVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSQAAT 470
Query: 103 QEARARIEELI 113
Q A+ I + I
Sbjct: 471 QAAQYLISQRI 481
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 59 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNG 118
Query: 105 ARARIEELI 113
I E +
Sbjct: 119 VHDFIAEKV 127
Score = 42.4 bits (98), Expect = 0.069, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
++ VP + G++IGKGG +K + ++GA VQ Q E + +R +SG P+Q ++A
Sbjct: 158 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTISGEPEQNRKA 216
>gi|148700016|gb|EDL31963.1| bicaudal C homolog 1 (Drosophila), isoform CRA_d [Mus musculus]
Length = 951
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 59 VIGKGGDMIKKLQNETGARVQFVQMREDDPSDR--RCMLSGSPDQVQEARARIEELIDSV 116
VIGKGG+ IKK+ +TG + F ++ +++ + ++G P V+ ARARI EL+ V
Sbjct: 149 VIGKGGNNIKKVMEDTGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVESARARIRELLPLV 208
Query: 117 MV 118
++
Sbjct: 209 LM 210
>gi|297686887|ref|XP_002820965.1| PREDICTED: LOW QUALITY PROTEIN: protein bicaudal C homolog 1 [Pongo
abelii]
Length = 894
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 59 VIGKGGDMIKKLQNETGARVQFVQMREDDPSDR--RCMLSGSPDQVQEARARIEELIDSV 116
VIGKGG+ IKK+ ETG + F ++ +++ + ++G P V+ AR RI EL+ V
Sbjct: 67 VIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVESARVRIRELLPLV 126
Query: 117 MV 118
++
Sbjct: 127 LM 128
>gi|281353928|gb|EFB29512.1| hypothetical protein PANDA_017360 [Ailuropoda melanoleuca]
Length = 872
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 59 VIGKGGDMIKKLQNETGARVQFVQMREDDPSDR--RCMLSGSPDQVQEARARIEELIDSV 116
VIGKGG+ IKK+ ETG + F ++ +++ + ++G P V+ AR RI EL+ V
Sbjct: 45 VIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVESARVRIRELLPLV 104
Query: 117 MV 118
++
Sbjct: 105 LM 106
>gi|355559801|gb|EHH16529.1| hypothetical protein EGK_11818, partial [Macaca mulatta]
Length = 542
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 37/65 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
EV+ + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 371 EVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 430
Query: 105 ARARI 109
A+ RI
Sbjct: 431 AQGRI 435
>gi|440905354|gb|ELR55741.1| Heterogeneous nuclear ribonucleoprotein K [Bos grunniens mutus]
Length = 464
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++ +E+GA ++ + E DR
Sbjct: 376 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIHHESGASIKIDEPLEGS-EDRI 434
Query: 93 CMLSGSPDQVQEAR 106
++G+ DQ+Q A+
Sbjct: 435 ITITGTQDQIQNAQ 448
>gi|148674926|gb|EDL06873.1| mCG121849, isoform CRA_d [Mus musculus]
Length = 261
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E D+
Sbjct: 173 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDQI 231
Query: 93 CMLSGSPDQVQEARARIEELI 113
++G+ DQ+Q A+ ++ +
Sbjct: 232 ITITGTQDQIQNAQYLLQNSV 252
>gi|363737066|ref|XP_003641794.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Gallus gallus]
Length = 564
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
EV+ + +P AVG +IGK G IK+L GA ++ D ++R +++G P+ +
Sbjct: 392 EVVNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAEGPDATERMVIITGPPEAQFK 451
Query: 105 ARARI 109
A+ RI
Sbjct: 452 AQGRI 456
>gi|321468687|gb|EFX79671.1| hypothetical protein DAPPUDRAFT_225024 [Daphnia pulex]
Length = 573
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 31/48 (64%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM 94
+++ VP + G++IGKGG IK+++ E+GA +Q Q +D RC+
Sbjct: 152 VKILVPNSTAGMIIGKGGSFIKQIKEESGAYIQISQKAKDQALQERCI 199
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V VP A G +IGKGG+ I ++Q E AR++ + + P ++R C++ G+ + V
Sbjct: 58 LKVLVPSVAAGAIIGKGGETIAQVQKEVNARIKMSKANDFYPGTTERVCLIKGTTESVMS 117
Query: 105 ARARIEELI 113
I E I
Sbjct: 118 MLTFICEKI 126
>gi|13994223|ref|NP_113574.1| protein bicaudal C homolog 1 [Mus musculus]
gi|81867880|sp|Q99MQ1.1|BICC1_MOUSE RecName: Full=Protein bicaudal C homolog 1; Short=Bic-C
gi|13469818|gb|AAK27347.1|AF319464_1 bicaudal-C [Mus musculus]
gi|84105539|gb|AAI11524.1| Bicaudal C homolog 1 (Drosophila) [Mus musculus]
gi|148700015|gb|EDL31962.1| bicaudal C homolog 1 (Drosophila), isoform CRA_c [Mus musculus]
Length = 977
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 59 VIGKGGDMIKKLQNETGARVQFVQMREDDPSDR--RCMLSGSPDQVQEARARIEELIDSV 116
VIGKGG+ IKK+ +TG + F ++ +++ + ++G P V+ ARARI EL+ V
Sbjct: 149 VIGKGGNNIKKVMEDTGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVESARARIRELLPLV 208
Query: 117 MV 118
++
Sbjct: 209 LM 210
>gi|296220631|ref|XP_002756390.1| PREDICTED: protein bicaudal C homolog 1 [Callithrix jacchus]
Length = 954
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 59 VIGKGGDMIKKLQNETGARVQFVQMREDDPSDR--RCMLSGSPDQVQEARARIEELIDSV 116
VIGKGG+ IKK+ ETG + F ++ +++ + ++G P V+ AR RI EL+ V
Sbjct: 127 VIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVESARVRIRELLPLV 186
Query: 117 MV 118
++
Sbjct: 187 LM 188
>gi|149690261|ref|XP_001502118.1| PREDICTED: protein bicaudal C homolog 1 [Equus caballus]
Length = 913
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 59 VIGKGGDMIKKLQNETGARVQFVQMREDDPSDR--RCMLSGSPDQVQEARARIEELIDSV 116
VIGKGG+ IKK+ ETG + F ++ +++ + ++G P V+ AR RI EL+ V
Sbjct: 87 VIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVESARVRIRELLPLV 146
Query: 117 MV 118
++
Sbjct: 147 LM 148
>gi|335301661|ref|XP_001929158.2| PREDICTED: protein bicaudal C homolog 1 [Sus scrofa]
Length = 894
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 59 VIGKGGDMIKKLQNETGARVQFVQMREDDPSDR--RCMLSGSPDQVQEARARIEELIDSV 116
VIGKGG+ IKK+ ETG + F ++ +++ + ++G P V+ AR RI EL+ V
Sbjct: 67 VIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVESARVRIRELLPLV 126
Query: 117 MV 118
++
Sbjct: 127 LM 128
>gi|344250996|gb|EGW07100.1| Kinesin-like protein KIF27 [Cricetulus griseus]
Length = 1648
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 9/65 (13%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP----SDRRCMLSGSPDQ 101
QV +PK G +IGKGG IK++++E+GA ++ D+P DR ++G+ DQ
Sbjct: 321 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-----DEPLEGSEDRIITITGTQDQ 375
Query: 102 VQEAR 106
+Q A+
Sbjct: 376 IQNAQ 380
>gi|297813443|ref|XP_002874605.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297320442|gb|EFH50864.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 730
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFV-QMREDDP-SDRRCMLSGSPDQV 102
E I++ VP VG++IG+GG+ IK +Q +GAR+Q + Q E D +R +SG Q+
Sbjct: 278 EQIEIKVPNDKVGLIIGRGGETIKDMQTRSGARIQLIPQHAEGDGLKERTVRISGDKMQI 337
Query: 103 QEARARIEELID 114
A I+++++
Sbjct: 338 DIATDMIKDVMN 349
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 28/77 (36%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSD--RRCMLSGSPDQVQEARAR 108
VP + VGV+IGKGG+ I+ LQ +GA++Q ++ E DP+ R + G+ ++ A
Sbjct: 188 VPNSKVGVLIGKGGETIRYLQFNSGAKIQILRDSEADPNSALRPVEIIGTVACIENA--- 244
Query: 109 IEELIDSVMVEQFSGAN 125
E LI +V+ E +G +
Sbjct: 245 -ERLISAVIAEAEAGGS 260
>gi|118137282|pdb|2ANN|A Chain A, Crystal Structure (I) Of Nova-1 Kh1KH2 DOMAIN TANDEM WITH
25 NT RNA Hairpin
Length = 178
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 8 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALNA 67
Query: 105 ARARIEELI 113
I E I
Sbjct: 68 VHGFIAEKI 76
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
+++ VP + G++IGKGG +K + ++GA VQ Q + + +R +SG P+Q
Sbjct: 106 VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQNRVVTVSGEPEQ---N 162
Query: 106 RARIEELIDSV 116
R +E +I +
Sbjct: 163 RKAVELIIQKI 173
>gi|355782914|gb|EHH64835.1| hypothetical protein EGM_18156, partial [Macaca fascicularis]
Length = 914
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 59 VIGKGGDMIKKLQNETGARVQFVQMREDDPSDR--RCMLSGSPDQVQEARARIEELIDSV 116
VIGKGG+ IKK+ ETG + F ++ +++ + ++G P V+ AR RI EL+ V
Sbjct: 87 VIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVESARVRIRELLPLV 146
Query: 117 MV 118
++
Sbjct: 147 LM 148
>gi|424512903|emb|CCO66487.1| predicted protein [Bathycoccus prasinos]
Length = 565
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 39 MWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGS 98
++E T V C P++ VG +IGKGG+ IK L + TGA+V QM D R+ +++G+
Sbjct: 297 VYEETRTVKLDC-PQSLVGKIIGKGGETIKGLASTTGAKVIIDQMSMADGEPRKIVITGT 355
Query: 99 PDQVQEARARIEELID 114
Q+++ E++++
Sbjct: 356 NTQIEKVSKMCEDIMN 371
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 14/81 (17%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRC-----MLSGSPD 100
V+ V PK VG VIG+GG+ IK +Q TGAR Q D+ C ++SG P
Sbjct: 389 VVNVECPKECVGRVIGRGGETIKGIQLATGARAQI---------DQTCTPCLVIISGDPQ 439
Query: 101 QVQEARARIEELIDSVMVEQF 121
V + + E+I+ V QF
Sbjct: 440 YVNVCQQVVVEIINGGSVAQF 460
>gi|449277772|gb|EMC85822.1| Protein bicaudal C like protein 1, partial [Columba livia]
Length = 898
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 59 VIGKGGDMIKKLQNETGARVQFVQMREDDPSDR--RCMLSGSPDQVQEARARIEELIDSV 116
VIGKGG+ IKK+ ETG + F ++ +++ + ++G P V+ AR RI EL+ V
Sbjct: 69 VIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVESARVRIRELLPLV 128
Query: 117 MV 118
++
Sbjct: 129 LM 130
>gi|355562587|gb|EHH19181.1| hypothetical protein EGK_19842, partial [Macaca mulatta]
Length = 910
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 59 VIGKGGDMIKKLQNETGARVQFVQMREDDPSDR--RCMLSGSPDQVQEARARIEELIDSV 116
VIGKGG+ IKK+ ETG + F ++ +++ + ++G P V+ AR RI EL+ V
Sbjct: 83 VIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVESARVRIRELLPLV 142
Query: 117 MV 118
++
Sbjct: 143 LM 144
>gi|291392572|ref|XP_002712680.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K [Oryctolagus
cuniculus]
Length = 469
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 8/94 (8%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV VPK G +I KG IK++++E+GA ++ + E DR
Sbjct: 382 GRGSYGDLGGPIITTQVTVPKDLAGFIICKGAQQIKQIRHESGASIKIDEPLEGS-KDRI 440
Query: 93 CMLSGSPDQVQEARARIEELIDSVMVEQFSGANF 126
++G+ DQ+Q A+ ++ V+Q+SG F
Sbjct: 441 ITITGTQDQIQNAQYLLQN-----SVKQYSGKFF 469
>gi|119574562|gb|EAW54177.1| hCG2024326, isoform CRA_b [Homo sapiens]
Length = 880
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 59 VIGKGGDMIKKLQNETGARVQFVQMREDDPSDR--RCMLSGSPDQVQEARARIEELIDSV 116
VIGKGG+ IKK+ ETG + F ++ +++ + ++G P V+ AR RI EL+ V
Sbjct: 147 VIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVESARVRIRELLPLV 206
Query: 117 MV 118
++
Sbjct: 207 LM 208
>gi|118137284|pdb|2ANR|A Chain A, Crystal Structure (Ii) Of Nova-1 Kh1KH2 DOMAIN TANDEM WITH
25NT RNA Hairpin
Length = 178
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 8 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALNA 67
Query: 105 ARARIEELI 113
I E I
Sbjct: 68 VHGFIAEKI 76
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
+++ VP + G++IGKGG +K + ++GA VQ Q + + +R +SG P+Q ++A
Sbjct: 106 VKIIVPNSTAGLIIGKGGATVKAIXEQSGAWVQLSQKPDGINLQNRVVTVSGEPEQNRKA 165
>gi|89272931|emb|CAJ83219.1| heterogeneous nuclear ribonucleoprotein K [Xenopus (Silurana)
tropicalis]
Length = 376
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
QV +PK G +IGKGG IK++++E+GA ++ + E DR ++G+ DQ+Q A+
Sbjct: 301 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-DDRIITITGTQDQIQNAQF 359
Query: 108 RIEELIDSVMVEQFS 122
++ V+QFS
Sbjct: 360 LLQN-----SVKQFS 369
>gi|196009850|ref|XP_002114790.1| hypothetical protein TRIADDRAFT_28388 [Trichoplax adhaerens]
gi|190582852|gb|EDV22924.1| hypothetical protein TRIADDRAFT_28388 [Trichoplax adhaerens]
Length = 360
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM 94
+++ VP AA GV+IGKGG IK++Q+++GA VQ Q + D R +
Sbjct: 115 LKMIVPNAAAGVIIGKGGSNIKEIQDKSGAHVQVSQKKAQYAIDERIL 162
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQ 103
VI++ VP + +G ++GK G +I +QN +GA +Q Q + P DR ++G+ D
Sbjct: 274 VIKIPVPDSIIGAILGKRGKVISDIQNISGAHIQVSQRGDYIPGTKDREVTVTGTNDAAH 333
Query: 104 EARARIEELIDSVMVEQFS 122
A I+ +D +Q S
Sbjct: 334 YADKLIKGYLDKEYKKQAS 352
Score = 42.4 bits (98), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGS 98
V+++ +P A G +IGKGGD+I LQN++ R++ + P +R +++GS
Sbjct: 23 VLKLLIPNYAAGSIIGKGGDVINDLQNDSKTRIRLSHNNDTFPGTKERVIVITGS 77
>gi|351707160|gb|EHB10079.1| bicaudal C-like protein 1, partial [Heterocephalus glaber]
Length = 913
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 59 VIGKGGDMIKKLQNETGARVQFVQMREDDPSDR--RCMLSGSPDQVQEARARIEELIDSV 116
VIGKGG+ IKK+ ETG + F ++ +++ + ++G P V+ AR RI EL+ V
Sbjct: 87 VIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVESARVRIRELLPLV 146
Query: 117 MV 118
++
Sbjct: 147 LM 148
>gi|327267261|ref|XP_003218421.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Anolis carolinensis]
Length = 576
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
EV+ + +P AVG +IGK G IK+L GA ++ + S+R +++G P+ +
Sbjct: 404 EVVNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAESPEASERMVIITGPPEAQFK 463
Query: 105 ARARI 109
A+ RI
Sbjct: 464 AQGRI 468
>gi|195999114|ref|XP_002109425.1| hypothetical protein TRIADDRAFT_53440 [Trichoplax adhaerens]
gi|190587549|gb|EDV27591.1| hypothetical protein TRIADDRAFT_53440 [Trichoplax adhaerens]
Length = 634
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 5/81 (6%)
Query: 36 RGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRC 93
R G+ + E I++ P G+VIGKGGD I KLQ E+GA++Q VQ D +R
Sbjct: 104 RSGLNSIVVEEIKI--PNKMTGLVIGKGGDSINKLQAESGAKIQ-VQPDADAQGKPERIV 160
Query: 94 MLSGSPDQVQEARARIEELID 114
++GS V +A+ I+++++
Sbjct: 161 TITGSAVNVDQAKYLIDQMVN 181
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
+V +P G+VIGKGG+ I+++ ++GA V+ + + R ++ G P Q+Q A+
Sbjct: 383 EVVIPANKCGLVIGKGGETIRQIIQQSGAHVELNRNTPQESPTRIFVVRGGPQQIQHAQM 442
Query: 108 RIEELIDSVM 117
I++ I M
Sbjct: 443 IIKQKIGEEM 452
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 46/68 (67%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEA 105
+++V VP+ VGVVIG+GG+ IK++Q ETG ++QF + + DR ML+G+ D VQ A
Sbjct: 292 MLEVPVPRDVVGVVIGRGGETIKRIQMETGTKIQFKEDSNPNLPDRIAMLTGNDDSVQRA 351
Query: 106 RARIEELI 113
I +LI
Sbjct: 352 NKMISDLI 359
Score = 38.5 bits (88), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS-DRRCMLSGSP 99
E+T E++ VP VG+VIGKGG+MI+ Q T R+ VQ D+ + G P
Sbjct: 203 EITEEIL---VPANKVGLVIGKGGEMIRSFQERTQTRMVMVQESSHITGRDKPLRIGGDP 259
Query: 100 DQVQEAR 106
+V+ +
Sbjct: 260 QRVKPMK 266
>gi|45361501|ref|NP_989327.1| heterogeneous nuclear ribonucleoprotein K [Xenopus (Silurana)
tropicalis]
gi|39794355|gb|AAH64170.1| heterogeneous nuclear ribonucleoprotein K [Xenopus (Silurana)
tropicalis]
Length = 399
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
QV +PK G +IGKGG IK++++E+GA ++ + E DR ++G+ DQ+Q A+
Sbjct: 324 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-DDRIITITGTQDQIQNAQF 382
Query: 108 RIEELIDSVMVEQFS 122
++ V+QFS
Sbjct: 383 LLQN-----SVKQFS 392
>gi|147903924|ref|NP_001080563.1| heterogeneous nuclear ribonucleoprotein K [Xenopus laevis]
gi|27882469|gb|AAH44711.1| Hnrpk protein [Xenopus laevis]
Length = 399
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
QV +PK G +IGKGG IK++++E+GA ++ + E DR ++G+ DQ+Q A+
Sbjct: 324 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-DDRIITITGTQDQIQNAQF 382
Query: 108 RIEELIDSVMVEQFS 122
++ V+QFS
Sbjct: 383 LLQN-----SVKQFS 392
>gi|410910370|ref|XP_003968663.1| PREDICTED: RNA-binding protein Nova-1-like [Takifugu rubripes]
Length = 496
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
EV+++ VP+ VG ++GKGG + + Q TGAR+Q + E P +R+ ++GS
Sbjct: 411 EVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSQAAT 470
Query: 103 QEARARIEELI 113
Q A+ I + I
Sbjct: 471 QAAQYLISQRI 481
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 59 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNG 118
Query: 105 ARARIEELI 113
I E +
Sbjct: 119 VHNFIAEKV 127
Score = 42.0 bits (97), Expect = 0.080, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
++ VP + G++IGKGG +K + ++GA VQ Q E + +R +SG P+Q ++A
Sbjct: 158 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTISGEPEQNRKA 216
>gi|402880795|ref|XP_003903977.1| PREDICTED: protein bicaudal C homolog 1, partial [Papio anubis]
Length = 861
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 59 VIGKGGDMIKKLQNETGARVQFVQMREDDPSDR--RCMLSGSPDQVQEARARIEELIDSV 116
VIGKGG+ IKK+ ETG + F ++ +++ + ++G P V+ AR RI EL+ V
Sbjct: 70 VIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVESARVRIRELLPLV 129
Query: 117 MV 118
++
Sbjct: 130 LM 131
>gi|397501093|ref|XP_003821232.1| PREDICTED: protein bicaudal C homolog 1 [Pan paniscus]
Length = 989
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 59 VIGKGGDMIKKLQNETGARVQFVQMREDDPSDR--RCMLSGSPDQVQEARARIEELIDSV 116
VIGKGG+ IKK+ ETG + F ++ +++ + ++G P V+ AR RI EL+ V
Sbjct: 162 VIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVESARVRIRELLPLV 221
Query: 117 MV 118
++
Sbjct: 222 LM 223
>gi|345798974|ref|XP_850799.2| PREDICTED: LOW QUALITY PROTEIN: protein bicaudal C homolog 1 [Canis
lupus familiaris]
Length = 974
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 59 VIGKGGDMIKKLQNETGARVQFVQMREDDPSDR--RCMLSGSPDQVQEARARIEELIDSV 116
VIGKGG+ IKK+ ETG + F ++ +++ + ++G P V+ AR RI EL+ V
Sbjct: 147 VIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVESARVRIRELLPLV 206
Query: 117 MV 118
++
Sbjct: 207 LM 208
>gi|194679417|ref|XP_617983.4| PREDICTED: protein bicaudal C homolog 1 [Bos taurus]
gi|297491437|ref|XP_002698871.1| PREDICTED: protein bicaudal C homolog 1 [Bos taurus]
gi|296472213|tpg|DAA14328.1| TPA: bicaudal C homolog 1-like [Bos taurus]
Length = 892
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 59 VIGKGGDMIKKLQNETGARVQFVQMREDDPSDR--RCMLSGSPDQVQEARARIEELIDSV 116
VIGKGG+ IKK+ ETG + F ++ +++ + ++G P V+ AR RI EL+ V
Sbjct: 67 VIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVESARVRIRELLPLV 126
Query: 117 MV 118
++
Sbjct: 127 LM 128
>gi|119589501|gb|EAW69095.1| KH-type splicing regulatory protein (FUSE binding protein 2),
isoform CRA_a [Homo sapiens]
Length = 345
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q ++G +VQ P +R L+G+P+ VQ+A+ ++
Sbjct: 151 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-ERSVSLTGAPESVQKAKMMLD 209
Query: 111 ELI 113
+++
Sbjct: 210 DIV 212
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 24 GNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ 82
G +F++N +G V ++ +P G+VIGKGG+ IK+LQ G ++ +Q
Sbjct: 218 GPPGQFHDNANG-----GQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQ 271
>gi|281354032|gb|EFB29616.1| hypothetical protein PANDA_003725 [Ailuropoda melanoleuca]
Length = 434
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E++ + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 293 EIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 352
Query: 105 ARARI 109
A+ RI
Sbjct: 353 AQGRI 357
>gi|126272663|ref|XP_001363852.1| PREDICTED: protein bicaudal C homolog 1 [Monodelphis domestica]
Length = 973
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 59 VIGKGGDMIKKLQNETGARVQFVQMREDDPSDR--RCMLSGSPDQVQEARARIEELIDSV 116
VIGKGG+ IKK+ ETG + F ++ +++ + ++G P V+ AR RI EL+ V
Sbjct: 146 VIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVESARVRIRELLPLV 205
Query: 117 MV 118
++
Sbjct: 206 LM 207
>gi|440903475|gb|ELR54128.1| Protein bicaudal C-like protein 1, partial [Bos grunniens mutus]
Length = 912
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 59 VIGKGGDMIKKLQNETGARVQFVQMREDDPSDR--RCMLSGSPDQVQEARARIEELIDSV 116
VIGKGG+ IKK+ ETG + F ++ +++ + ++G P V+ AR RI EL+ V
Sbjct: 87 VIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVESARVRIRELLPLV 146
Query: 117 MV 118
++
Sbjct: 147 LM 148
>gi|410975167|ref|XP_003994006.1| PREDICTED: protein bicaudal C homolog 1 [Felis catus]
Length = 910
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 59 VIGKGGDMIKKLQNETGARVQFVQMREDDPSDR--RCMLSGSPDQVQEARARIEELIDSV 116
VIGKGG+ IKK+ ETG + F ++ +++ + ++G P V+ AR RI EL+ V
Sbjct: 83 VIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVESARVRIRELLPLV 142
Query: 117 MV 118
++
Sbjct: 143 LM 144
>gi|403273943|ref|XP_003928755.1| PREDICTED: protein bicaudal C homolog 1 [Saimiri boliviensis
boliviensis]
Length = 974
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 59 VIGKGGDMIKKLQNETGARVQFVQMREDDPSDR--RCMLSGSPDQVQEARARIEELIDSV 116
VIGKGG+ IKK+ ETG + F ++ +++ + ++G P V+ AR RI EL+ V
Sbjct: 147 VIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVESARVRIRELLPLV 206
Query: 117 MV 118
++
Sbjct: 207 LM 208
>gi|332218308|ref|XP_003258298.1| PREDICTED: protein bicaudal C homolog 1 [Nomascus leucogenys]
Length = 974
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 59 VIGKGGDMIKKLQNETGARVQFVQMREDDPSDR--RCMLSGSPDQVQEARARIEELIDSV 116
VIGKGG+ IKK+ ETG + F ++ +++ + ++G P V+ AR RI EL+ V
Sbjct: 147 VIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVESARVRIRELLPLV 206
Query: 117 MV 118
++
Sbjct: 207 LM 208
>gi|397470081|ref|XP_003806662.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Pan paniscus]
gi|179479866|gb|ACB86625.1| insulin-like 2 growth factor 2-binding protein 2 [Homo sapiens]
Length = 542
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E++ + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 371 EIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 430
Query: 105 ARARI 109
A+ RI
Sbjct: 431 AQGRI 435
>gi|109042331|ref|XP_001095005.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 2 [Macaca mulatta]
gi|402860701|ref|XP_003894761.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Papio anubis]
Length = 556
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 37/65 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
EV+ + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 385 EVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 444
Query: 105 ARARI 109
A+ RI
Sbjct: 445 AQGRI 449
>gi|332215037|ref|XP_003256643.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 6 [Nomascus leucogenys]
Length = 542
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E++ + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 371 EIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 430
Query: 105 ARARI 109
A+ RI
Sbjct: 431 AQGRI 435
>gi|348582424|ref|XP_003476976.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Cavia porcellus]
Length = 532
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E++ + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 361 EIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 420
Query: 105 ARARI 109
A+ RI
Sbjct: 421 AQGRI 425
>gi|359324034|ref|XP_003640270.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K isoform 1
[Canis lupus familiaris]
Length = 466
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV + K G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 376 GRGSYGDLGGPIITTQVTISKDLAGSIIGKGGRRIKQVRHESGASIKIDEPLEGS-EDRV 434
Query: 93 CMLSGSPDQVQEARARIEELIDSVMVEQFSGANF 126
++G+ DQ+Q A ++ + V+Q+SG F
Sbjct: 435 ITITGTQDQIQNAPYLLQNSVKH--VKQYSGKFF 466
Score = 35.4 bits (80), Expect = 7.0, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 36/67 (53%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+++ + ++ G +IG G IK+L+ T ++ Q P+DR ++ G PD+V E
Sbjct: 147 LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHPTDRVVLIGGKPDRVVECI 206
Query: 107 ARIEELI 113
I +LI
Sbjct: 207 KIILDLI 213
>gi|47209712|emb|CAF94605.1| unnamed protein product [Tetraodon nigroviridis]
Length = 644
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q + +R C L+G+P+ ++ A+ +
Sbjct: 48 VPDRMVGFIIGRGGEQINRIQLESGCKIQ-IAADSGGLLERPCSLTGTPESIEHAKRLLV 106
Query: 111 ELID 114
+++D
Sbjct: 107 QIVD 110
Score = 42.4 bits (98), Expect = 0.055, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCM 94
G + EVT+ + P G+VIGKGG+ IK + ++GA V+ + DP+ R
Sbjct: 348 GPLQEVTYTI-----PADKCGLVIGKGGETIKSINQQSGAHVELQRNPPPSTDPNTRVFT 402
Query: 95 LSGSPDQVQEARARIEELI 113
+ GS Q+ AR I++ I
Sbjct: 403 IRGSAQQMDVARQLIDDKI 421
Score = 36.2 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 5/38 (13%)
Query: 34 DGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQ 71
DG GG V ++ +P + VG+VIG+GGD IK+LQ
Sbjct: 121 DGEGGA-----SVQEMLIPASKVGLVIGRGGDTIKQLQ 153
>gi|410970835|ref|XP_003991882.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Felis catus]
Length = 536
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E++ + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 365 EIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 424
Query: 105 ARARI 109
A+ RI
Sbjct: 425 AQGRI 429
>gi|395839825|ref|XP_003792776.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Otolemur garnettii]
Length = 597
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E++ + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 426 EIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 485
Query: 105 ARARI 109
A+ RI
Sbjct: 486 AQGRI 490
>gi|344282127|ref|XP_003412826.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Loxodonta africana]
Length = 599
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E++ + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 428 EIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 487
Query: 105 ARARI 109
A+ RI
Sbjct: 488 AQGRI 492
>gi|397470077|ref|XP_003806660.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Pan paniscus]
gi|179479906|gb|ACB86626.1| insulin-like 2 growth factor 2-binding protein 2 [Homo sapiens]
Length = 536
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E++ + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 365 EIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 424
Query: 105 ARARI 109
A+ RI
Sbjct: 425 AQGRI 429
>gi|332215029|ref|XP_003256639.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Nomascus leucogenys]
Length = 536
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E++ + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 365 EIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 424
Query: 105 ARARI 109
A+ RI
Sbjct: 425 AQGRI 429
>gi|194222666|ref|XP_001498933.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 1 [Equus caballus]
Length = 620
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E++ + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 449 EIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 508
Query: 105 ARARI 109
A+ RI
Sbjct: 509 AQGRI 513
>gi|410970839|ref|XP_003991884.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Felis catus]
Length = 542
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E++ + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 371 EIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 430
Query: 105 ARARI 109
A+ RI
Sbjct: 431 AQGRI 435
>gi|326504604|dbj|BAK06593.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 531
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 6/107 (5%)
Query: 27 REFNENGDGRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMR 84
R F+ NG G + V E++ +C+ VG VIGKGG I+ LQ+ETGA V+ +
Sbjct: 138 RNFSSNGAAPGPRFFVEQEIVFRMICL-NDMVGGVIGKGGSTIRALQSETGASVKVIDPV 196
Query: 85 EDDPSDRRCMLSGSPDQVQEARARIEELIDSVMVEQFSGANFDKLRS 131
D SD R ++ + + + R+ ++ + V + S A+ DK S
Sbjct: 197 AD--SDERIIVISARENSEMMRSPSQDALLRVY-SKISEASMDKSSS 240
>gi|168988641|pdb|2OPU|A Chain A, Solution Nmr Structure Of The First Domain Of Ksrp
Length = 89
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q ++G +VQ P +R L+G+P+ VQ+A+ ++
Sbjct: 22 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-ERSVSLTGAPESVQKAKMMLD 80
Query: 111 ELI 113
+++
Sbjct: 81 DIV 83
>gi|427792951|gb|JAA61927.1| Putative rna-binding protein nova1/pasilla, partial [Rhipicephalus
pulchellus]
Length = 448
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 6/68 (8%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQEA 105
++ VP A G +IGKGG+ I LQ E GARV+ + + P ++R C+++GS + V
Sbjct: 41 KILVPAVAAGAIIGKGGETIALLQKEAGARVKMSKSNDFYPGTTERVCLITGSVEGV--- 97
Query: 106 RARIEELI 113
RI E I
Sbjct: 98 -LRIHEFI 104
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 31/48 (64%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM 94
+++ VP + G++IGKGG IK+++ E+GA VQ Q +D RC+
Sbjct: 134 VKILVPNSTAGMIIGKGGSYIKQIKEESGAYVQISQKSKDHALAERCI 181
>gi|326925691|ref|XP_003209044.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Meleagris gallopavo]
Length = 502
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
EV+ + +P AVG +IGK G IK+L GA ++ D ++R +++G P+ +
Sbjct: 330 EVVNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAEGPDATERMVIITGPPEAQFK 389
Query: 105 ARARI 109
A+ RI
Sbjct: 390 AQGRI 394
>gi|160773967|gb|AAI55088.1| Igf2bp2 protein [Danio rerio]
Length = 261
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
EV+ + +P AVG +IGK G IK+L GA ++ D + R +++G P+ +
Sbjct: 89 EVVYLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAESPDVTQRMVIITGPPEAQFK 148
Query: 105 ARARI 109
A+ RI
Sbjct: 149 AQGRI 153
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM-LSGSP 99
EV E + VP +A G VIGKGG + +LQN T A V + + D +D + +SG
Sbjct: 168 EVKLET-HIKVPSSAAGRVIGKGGRTVNELQNLTSAEVIVPRDQTPDENDEVFVKISGHF 226
Query: 100 DQVQEARARIEELIDSV 116
Q A+ +I E+I V
Sbjct: 227 FASQTAQRKIREIIQQV 243
>gi|47226335|emb|CAG09303.1| unnamed protein product [Tetraodon nigroviridis]
Length = 760
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 39/65 (60%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
EV + +P AVG +IGK G IK+L + GA ++ + D ++R +++G+P+ +
Sbjct: 496 EVAYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAEKPDATERMVIITGTPEAQFK 555
Query: 105 ARARI 109
A+ RI
Sbjct: 556 AQGRI 560
>gi|426364816|ref|XP_004049490.1| PREDICTED: protein bicaudal C homolog 1 [Gorilla gorilla gorilla]
gi|410336945|gb|JAA37419.1| bicaudal C homolog 1 [Pan troglodytes]
Length = 974
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 59 VIGKGGDMIKKLQNETGARVQFVQMREDDPSDR--RCMLSGSPDQVQEARARIEELIDSV 116
VIGKGG+ IKK+ ETG + F ++ +++ + ++G P V+ AR RI EL+ V
Sbjct: 147 VIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVESARVRIRELLPLV 206
Query: 117 MV 118
++
Sbjct: 207 LM 208
>gi|332834316|ref|XP_507803.3| PREDICTED: LOW QUALITY PROTEIN: protein bicaudal C homolog 1 [Pan
troglodytes]
Length = 974
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 59 VIGKGGDMIKKLQNETGARVQFVQMREDDPSDR--RCMLSGSPDQVQEARARIEELIDSV 116
VIGKGG+ IKK+ ETG + F ++ +++ + ++G P V+ AR RI EL+ V
Sbjct: 147 VIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVESARVRIRELLPLV 206
Query: 117 MV 118
++
Sbjct: 207 LM 208
>gi|6031189|ref|NP_006482.1| RNA-binding protein Nova-1 isoform 3 [Homo sapiens]
gi|114652481|ref|XP_001170491.1| PREDICTED: RNA-binding protein Nova-1 isoform 1 [Pan troglodytes]
gi|332223201|ref|XP_003260756.1| PREDICTED: RNA-binding protein Nova-1-like isoform 3 [Nomascus
leucogenys]
gi|426376608|ref|XP_004055089.1| PREDICTED: RNA-binding protein Nova-1-like isoform 3 [Gorilla
gorilla gorilla]
gi|119586395|gb|EAW65991.1| neuro-oncological ventral antigen 1, isoform CRA_b [Homo sapiens]
gi|158260301|dbj|BAF82328.1| unnamed protein product [Homo sapiens]
gi|410265346|gb|JAA20639.1| neuro-oncological ventral antigen 1 [Pan troglodytes]
gi|410293722|gb|JAA25461.1| neuro-oncological ventral antigen 1 [Pan troglodytes]
gi|410353657|gb|JAA43432.1| neuro-oncological ventral antigen 1 [Pan troglodytes]
Length = 181
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNA 111
Query: 105 ARARIEELI 113
I E I
Sbjct: 112 VHGFIAEKI 120
>gi|4191610|gb|AAD09827.1| IGF-II mRNA-binding protein 2 [Homo sapiens]
gi|18204201|gb|AAH21290.1| Insulin-like growth factor 2 mRNA binding protein 2 [Homo sapiens]
gi|123982692|gb|ABM83087.1| insulin-like growth factor 2 mRNA binding protein 2 [synthetic
construct]
gi|157928388|gb|ABW03490.1| insulin-like growth factor 2 mRNA binding protein 2 [synthetic
construct]
Length = 598
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E++ + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 427 EIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 486
Query: 105 ARARI 109
A+ RI
Sbjct: 487 AQGRI 491
>gi|119574567|gb|EAW54182.1| hCG2024326, isoform CRA_g [Homo sapiens]
Length = 973
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 59 VIGKGGDMIKKLQNETGARVQFVQMREDDPSDR--RCMLSGSPDQVQEARARIEELIDSV 116
VIGKGG+ IKK+ ETG + F ++ +++ + ++G P V+ AR RI EL+ V
Sbjct: 147 VIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVESARVRIRELLPLV 206
Query: 117 MV 118
++
Sbjct: 207 LM 208
>gi|64085377|ref|NP_006539.3| insulin-like growth factor 2 mRNA-binding protein 2 isoform a [Homo
sapiens]
gi|224471831|sp|Q9Y6M1.2|IF2B2_HUMAN RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 2;
Short=IGF2 mRNA-binding protein 2; Short=IMP-2; AltName:
Full=Hepatocellular carcinoma autoantigen p62; AltName:
Full=IGF-II mRNA-binding protein 2; AltName: Full=VICKZ
family member 2
gi|119598617|gb|EAW78211.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_c
[Homo sapiens]
gi|158254760|dbj|BAF83353.1| unnamed protein product [Homo sapiens]
gi|410223074|gb|JAA08756.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410251296|gb|JAA13615.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410302886|gb|JAA30043.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410342487|gb|JAA40190.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
Length = 599
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E++ + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 428 EIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 487
Query: 105 ARARI 109
A+ RI
Sbjct: 488 AQGRI 492
>gi|346716381|ref|NP_001231203.1| tudor and KH domain-containing protein [Sus scrofa]
gi|212725850|gb|ACJ38130.1| TDRKH [Sus scrofa]
Length = 558
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I++ VP+ +V ++IG+ G IK+L+ +TGAR+ ED +R ++SG P QV +A+
Sbjct: 55 IEMRVPQESVKLIIGRQGANIKQLRKQTGARIDVDT--EDIGDERVLLISGFPVQVCKAK 112
Query: 107 ARIEELI--DSVMVEQFS 122
A I +++ ++ + EQ S
Sbjct: 113 AAIHQILTENTPVSEQLS 130
>gi|159475617|ref|XP_001695915.1| hypothetical protein CHLREDRAFT_191517 [Chlamydomonas reinhardtii]
gi|158275475|gb|EDP01252.1| predicted protein [Chlamydomonas reinhardtii]
Length = 338
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 53/100 (53%), Gaps = 4/100 (4%)
Query: 32 NGDGRGGMWEVTWEVI-QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP-- 88
+G G G + T +V+ ++ V + G VIGK G I++LQ +GARVQ + E P
Sbjct: 29 SGSGSGDLPTGTQQVVAKLLVSNSIAGSVIGKAGANIEQLQRSSGARVQLSRAGEFYPGT 88
Query: 89 SDRRCMLSGSPDQVQEARARIEELIDSVMVEQFSGANFDK 128
SDR +LSGS V A I E I S V +GAN K
Sbjct: 89 SDRVLLLSGSLHAVLTAIFLILEKI-SRDVSAGAGANGAK 127
>gi|431896652|gb|ELK06064.1| Tudor and KH domain-containing protein [Pteropus alecto]
Length = 575
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+++ VP+ AV ++IG+ G IK+L+ +TGAR+ ED +R ++SG P QV +A+
Sbjct: 55 MEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDT--EDVGDERVLLISGFPVQVCKAK 112
Query: 107 ARIEELI--DSVMVEQFS 122
A I +++ ++ + EQ S
Sbjct: 113 AAIHQILTENTPVSEQLS 130
>gi|351709601|gb|EHB12520.1| Insulin-like growth factor 2 mRNA-binding protein 2 [Heterocephalus
glaber]
Length = 493
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E++ + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 322 EIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 381
Query: 105 ARARI 109
A+ RI
Sbjct: 382 AQGRI 386
>gi|332818640|ref|XP_001151234.2| PREDICTED: LOW QUALITY PROTEIN: insulin-like growth factor 2 mRNA
binding protein 2 isoform 7 [Pan troglodytes]
Length = 599
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E++ + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 428 EIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 487
Query: 105 ARARI 109
A+ RI
Sbjct: 488 AQGRI 492
>gi|301759723|ref|XP_002915742.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 1 [Ailuropoda melanoleuca]
Length = 599
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E++ + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 428 EIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 487
Query: 105 ARARI 109
A+ RI
Sbjct: 488 AQGRI 492
>gi|291400299|ref|XP_002716509.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2-like
isoform 1 [Oryctolagus cuniculus]
Length = 599
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E++ + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 428 EIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 487
Query: 105 ARARI 109
A+ RI
Sbjct: 488 AQGRI 492
>gi|118486946|gb|ABK95306.1| unknown [Populus trichocarpa]
Length = 313
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
I++ V AA G VIGKGG I Q+++GAR+Q + E P SDR ++SG D +
Sbjct: 37 IKLLVSNAAAGSVIGKGGATITDFQSQSGARIQLSKNYEFFPGTSDRIILISGGIDDALK 96
Query: 105 ARARIEELIDSVMVE 119
A +E +I ++ E
Sbjct: 97 A---LELIIAKLLSE 108
>gi|122937472|ref|NP_001073981.1| protein bicaudal C homolog 1 [Homo sapiens]
gi|119367815|sp|Q9H694.2|BICC1_HUMAN RecName: Full=Protein bicaudal C homolog 1; Short=Bic-C
gi|119574561|gb|EAW54176.1| hCG2024326, isoform CRA_a [Homo sapiens]
gi|162319328|gb|AAI56901.1| Bicaudal C homolog 1 (Drosophila) [synthetic construct]
Length = 974
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 59 VIGKGGDMIKKLQNETGARVQFVQMREDDPSDR--RCMLSGSPDQVQEARARIEELIDSV 116
VIGKGG+ IKK+ ETG + F ++ +++ + ++G P V+ AR RI EL+ V
Sbjct: 147 VIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVESARVRIRELLPLV 206
Query: 117 MV 118
++
Sbjct: 207 LM 208
>gi|109089742|ref|XP_001097455.1| PREDICTED: protein bicaudal C homolog 1 [Macaca mulatta]
Length = 974
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 59 VIGKGGDMIKKLQNETGARVQFVQMREDDPSDR--RCMLSGSPDQVQEARARIEELIDSV 116
VIGKGG+ IKK+ ETG + F ++ +++ + ++G P V+ AR RI EL+ V
Sbjct: 147 VIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVESARVRIRELLPLV 206
Query: 117 MV 118
++
Sbjct: 207 LM 208
>gi|431904199|gb|ELK09621.1| Protein bicaudal C like protein 1 [Pteropus alecto]
Length = 993
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 59 VIGKGGDMIKKLQNETGARVQFVQMREDDPSDR--RCMLSGSPDQVQEARARIEELIDSV 116
VIGKGG+ IKK+ ETG + F ++ +++ + ++G P V+ AR RI EL+ V
Sbjct: 143 VIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVESARVRIRELLPLV 202
Query: 117 MV 118
++
Sbjct: 203 LM 204
>gi|74195705|dbj|BAE39657.1| unnamed protein product [Mus musculus]
Length = 463
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 8/94 (8%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +I KGG IK++++E+GA ++ + E DR
Sbjct: 376 GRGSYGDLGGPIITTQVTIPKDLAGSIIVKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 434
Query: 93 CMLSGSPDQVQEARARIEELIDSVMVEQFSGANF 126
++G+ DQ+Q A+ ++ V+Q+SG F
Sbjct: 435 ITITGTQDQIQNAQYLLQN-----SVKQYSGKFF 463
>gi|395820685|ref|XP_003783692.1| PREDICTED: protein bicaudal C homolog 1 [Otolemur garnettii]
Length = 972
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 59 VIGKGGDMIKKLQNETGARVQFVQMREDDPSDR--RCMLSGSPDQVQEARARIEELIDSV 116
VIGKGG+ IKK+ ETG + F ++ +++ + ++G P V+ AR RI EL+ V
Sbjct: 147 VIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVESARVRIRELLPLV 206
Query: 117 MV 118
++
Sbjct: 207 LM 208
>gi|440899520|gb|ELR50813.1| Insulin-like growth factor 2 mRNA-binding protein 2 [Bos grunniens
mutus]
Length = 597
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E++ + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 426 EIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 485
Query: 105 ARARI 109
A+ RI
Sbjct: 486 AQGRI 490
>gi|346320774|gb|EGX90374.1| far upstream element-binding protein 2 [Cordyceps militaris CM01]
Length = 687
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Query: 27 REFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED 86
R+ N++ + G +VT + VP AVG++IGKGG+ I+++Q++ ++ Q
Sbjct: 497 RDHNQHSNPYDGPGKVT---DAIYVPSDAVGMIIGKGGETIREIQSQAECKINVAQSSGP 553
Query: 87 DPSDRRCMLSGSPDQVQEARARIEELIDSV 116
R L G+P ++ A+ I+E ++++
Sbjct: 554 GEVQREISLVGAPASIERAKQLIDEKVEAM 583
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 29/110 (26%), Positives = 58/110 (52%), Gaps = 5/110 (4%)
Query: 5 EFQQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGG 64
E+ + R W R++ G R+ + G GG + E IQ+ + VG++IG+ G
Sbjct: 263 EYGRERSWSPPRERHSPRSGRGRDRSPLRSGGGG--DENSETIQI--ESSLVGLIIGRNG 318
Query: 65 DMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
+ ++++++E+ RVQF+ + P R+C ++G + E + I +I+
Sbjct: 319 ENLRRIESESSCRVQFLSPTDGGPF-RQCRITGPAPRRSEVKDAINRIIE 367
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 37/69 (53%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+Q+ VP VG++IG+GG+ I+ LQ +G + V + R L G+P A+
Sbjct: 397 MQIMVPDRTVGLIIGRGGETIRDLQERSGCHINIVHESKSVNGLRPVNLIGTPVATARAK 456
Query: 107 ARIEELIDS 115
I E++DS
Sbjct: 457 DFILEIVDS 465
>gi|332215027|ref|XP_003256638.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Nomascus leucogenys]
Length = 599
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E++ + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 428 EIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 487
Query: 105 ARARI 109
A+ RI
Sbjct: 488 AQGRI 492
>gi|291404339|ref|XP_002718527.1| PREDICTED: bicaudal C homolog 1 [Oryctolagus cuniculus]
Length = 974
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 59 VIGKGGDMIKKLQNETGARVQFVQMREDDPSDR--RCMLSGSPDQVQEARARIEELIDSV 116
VIGKGG+ IKK+ ETG + F ++ +++ + ++G P V+ AR RI EL+ V
Sbjct: 147 VIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVESARVRIRELLPLV 206
Query: 117 MV 118
++
Sbjct: 207 LM 208
>gi|209148569|gb|ACI32944.1| Heterogeneous nuclear ribonucleoprotein K [Salmo salar]
Length = 443
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 9/108 (8%)
Query: 7 QQSRRWQQGIGRNNDNFG-----NMREFNE-NGDGRGGMWEVTWEVI--QVCVPKAAVGV 58
Q S R + R DN G N +N GR ++ VI QV +PK G
Sbjct: 322 QNSDRRGRPGDRYGDNMGGGGYDNSSSWNSYQSGGRASYNDMGGPVITTQVTIPKDLAGS 381
Query: 59 VIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+IGKGG IK++++E+GA ++ + E DR +SG+ DQ+Q A+
Sbjct: 382 IIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRIITISGTQDQIQNAQ 428
>gi|449504860|ref|XP_002188483.2| PREDICTED: protein bicaudal C homolog 1 [Taeniopygia guttata]
Length = 990
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 59 VIGKGGDMIKKLQNETGARVQFVQMREDDPSDR--RCMLSGSPDQVQEARARIEELIDSV 116
VIGKGG+ IKK+ ETG + F ++ +++ + ++G P V+ AR RI EL+ V
Sbjct: 162 VIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVESARVRIRELLPLV 221
Query: 117 MV 118
++
Sbjct: 222 LM 223
>gi|72084060|ref|XP_790705.1| PREDICTED: uncharacterized protein LOC585801 isoform 2
[Strongylocentrotus purpuratus]
Length = 557
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
+++ VP + G++IGKGG MIK + ++G+RVQ Q + S+R +SG D ++A
Sbjct: 171 VKIVVPNSTAGLIIGKGGAMIKSIMEQSGSRVQISQKSDGITLSERVITISGESDNNRKA 230
Query: 106 RARI 109
+ I
Sbjct: 231 MSFI 234
Score = 42.0 bits (97), Expect = 0.075, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQ 103
+++ VP+ VG ++GKGG + + QN TGA++Q + E P +RR ++G Q
Sbjct: 475 ILESEVPETLVGAILGKGGKTLVEFQNLTGAKIQISKKNEYVPGTRNRRVTITGPVTAAQ 534
Query: 104 EA 105
A
Sbjct: 535 NA 536
Score = 42.0 bits (97), Expect = 0.088, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 33 GDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SD 90
G G GG + ++++ +P A G +IGKGG I +LQ +TG V+ + + P +
Sbjct: 65 GSGPGGPIDDNKYMLKMLIPSTAAGSIIGKGGQTIAQLQRDTGTNVKLSKANDFYPGTQE 124
Query: 91 RRCMLSG 97
R +L+G
Sbjct: 125 RVALLTG 131
>gi|426217760|ref|XP_004003120.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Ovis aries]
Length = 599
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E++ + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 428 EIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 487
Query: 105 ARARI 109
A+ RI
Sbjct: 488 AQGRI 492
>gi|300795407|ref|NP_001179433.1| insulin-like growth factor 2 mRNA-binding protein 2 [Bos taurus]
gi|296491332|tpg|DAA33395.1| TPA: insulin-like growth factor 2 mRNA binding protein 2 isoform 1
[Bos taurus]
Length = 599
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E++ + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 428 EIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 487
Query: 105 ARARI 109
A+ RI
Sbjct: 488 AQGRI 492
>gi|358334721|dbj|GAA27863.2| RNA-binding protein Nova [Clonorchis sinensis]
Length = 759
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM-REDDPSDRRCMLSGSPDQVQEA 105
+++ VP + G+VIGKGG I++++ +TGA VQ Q RE + +R +++G DQ + A
Sbjct: 132 VKILVPNSTAGMVIGKGGSYIQEIKEKTGAYVQISQKSREFNLLERCIIIAGDLDQTRAA 191
Score = 42.0 bits (97), Expect = 0.072, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G VIGK G+ I K+Q +T +V+ + E P ++R C++ GS + V
Sbjct: 40 LKVLIPSIAAGAVIGKYGEAIGKIQKDTNTKVKISKQDEFYPGTTERVCLIVGSMEGVMS 99
Query: 105 ARARIEELI 113
I + I
Sbjct: 100 VHNYIMDRI 108
>gi|403299426|ref|XP_003940488.1| PREDICTED: RNA-binding protein Nova-2 [Saimiri boliviensis
boliviensis]
Length = 508
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 219 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 278
Query: 105 ARARIEELIDSV 116
+ I E + +
Sbjct: 279 VHSFIAEKVREI 290
Score = 45.1 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEAR 106
+ VP+ VG ++GKGG + + Q TGAR+Q + E P +RR ++GSP Q A+
Sbjct: 427 IAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQ 486
Query: 107 ARIEELI 113
I + +
Sbjct: 487 YLISQRV 493
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEAR 106
++ VP + G++IGKGG +K + ++GA VQ Q E + +R +SG P+QV +A
Sbjct: 318 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAV 377
Query: 107 ARI 109
+ I
Sbjct: 378 SAI 380
>gi|395501478|ref|XP_003755121.1| PREDICTED: protein bicaudal C homolog 1 [Sarcophilus harrisii]
Length = 973
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 59 VIGKGGDMIKKLQNETGARVQFVQMREDDPSDR--RCMLSGSPDQVQEARARIEELIDSV 116
VIGKGG+ IKK+ ETG + F ++ +++ + ++G P V+ AR RI EL+ V
Sbjct: 146 VIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVESARVRIRELLPLV 205
Query: 117 MV 118
++
Sbjct: 206 LM 207
>gi|302895759|ref|XP_003046760.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256727687|gb|EEU41047.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 1231
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 43 TWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSD 90
T I+V +P++ +IGKGG MIK LQ +TGA++Q ++ E++P D
Sbjct: 197 TRTAIKVPIPQSTRAHIIGKGGSMIKALQEKTGAKIQLPKVDENNPID 244
>gi|313760543|ref|NP_001186436.1| protein bicaudal C homolog 1 [Gallus gallus]
Length = 978
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 59 VIGKGGDMIKKLQNETGARVQFVQMREDDPSDR--RCMLSGSPDQVQEARARIEELIDSV 116
VIGKGG+ IKK+ ETG + F ++ +++ + ++G P V+ AR RI EL+ V
Sbjct: 151 VIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVESARVRIRELLPLV 210
Query: 117 MV 118
++
Sbjct: 211 LM 212
>gi|395839833|ref|XP_003792780.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 5 [Otolemur garnettii]
Length = 441
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E++ + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 270 EIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 329
Query: 105 ARARI 109
A+ RI
Sbjct: 330 AQGRI 334
>gi|148230152|ref|NP_001079663.1| RNA-binding protein Nova-1-like [Xenopus laevis]
gi|28302384|gb|AAH46731.1| MGC53786 protein [Xenopus laevis]
Length = 315
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
E +++ VP+ VG ++GKGG + + Q TGAR+Q + E P R+ ++G P
Sbjct: 230 ETLEMAVPETLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRSRKVTITGPPGAT 289
Query: 103 QEARARI 109
Q A+ I
Sbjct: 290 QAAQYLI 296
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 43 TWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPD 100
T+ ++ VP G++IGKGG ++ + E+GA VQ Q + P+ +R +SG P+
Sbjct: 32 TFTQAKLIVPNTTAGLIIGKGGATVRNIMEESGAWVQLSQ-KPAGPNLHERVVTVSGEPN 90
Query: 101 QVQEARARI 109
QVQ+A I
Sbjct: 91 QVQKAICSI 99
>gi|426255590|ref|XP_004021431.1| PREDICTED: protein bicaudal C homolog 1 [Ovis aries]
Length = 972
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 59 VIGKGGDMIKKLQNETGARVQFVQMREDDPSDR--RCMLSGSPDQVQEARARIEELIDSV 116
VIGKGG+ IKK+ ETG + F ++ +++ + ++G P V+ AR RI EL+ V
Sbjct: 147 VIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVESARVRIRELLPLV 206
Query: 117 MV 118
++
Sbjct: 207 LM 208
>gi|148704853|gb|EDL36800.1| mCG140771, isoform CRA_a [Mus musculus]
gi|149051190|gb|EDM03363.1| neuro-oncological ventral antigen 1, isoform CRA_d [Rattus
norvegicus]
Length = 180
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALNA 111
Query: 105 ARARIEELI 113
I E I
Sbjct: 112 VHGFIAEKI 120
>gi|326378247|gb|ADZ57223.1| neuro-oncological ventral antigen [Branchiostoma lanceolatum]
Length = 508
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 6/72 (8%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQ 103
V+++ VP+ VG ++GKGG + + Q +GAR+Q + E P ++R+ ++G+P Q
Sbjct: 428 VVELEVPENLVGAILGKGGKTLVEFQEYSGARIQISKKGEFTPGTNNRKVTITGTPAATQ 487
Query: 104 EA----RARIEE 111
A RARI +
Sbjct: 488 TAQYLVRARIAQ 499
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 24 GNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM 83
GN + N G+G E +++V +P A G +IGKGG I +LQ ETGA ++ +
Sbjct: 48 GNSKRSNFGGEGGP---EDGQLLLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKS 104
Query: 84 REDDP--SDRRCMLSGSPDQVQEARARIEELI 113
+ P ++R +++GS D ++ + E I
Sbjct: 105 NDFYPGTTERIVVITGSEDSLKSVHKFLMEKI 136
Score = 43.5 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCMLSGSPDQVQE 104
+++ VP + G++IGKGG IK + +TG+RVQ Q + +R ++G P+Q +
Sbjct: 160 VKIVVPNSTAGLIIGKGGATIKFIMEQTGSRVQISQKATSGINLPERVITITGEPEQNDK 219
Query: 105 ARARI 109
A A I
Sbjct: 220 ACAFI 224
>gi|47213422|emb|CAF94921.1| unnamed protein product [Tetraodon nigroviridis]
Length = 381
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 22 NFGNMREFNENGDGRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQ 79
+F N + GR ++ V+ QV +PK G +IGKGG IK++++++GA ++
Sbjct: 290 HFDNTPQLFCASGGRSSYSDIGGPVVTTQVTIPKDLAGSIIGKGGQRIKQIRHDSGAAIK 349
Query: 80 FVQMREDDPSDRRCMLSGSPDQVQEA 105
+ E DR ++G+ DQ+Q A
Sbjct: 350 IDEPLEGS-EDRIITITGTQDQIQNA 374
>gi|403270472|ref|XP_003927203.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
[Saimiri boliviensis boliviensis]
Length = 585
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E++ + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 414 EIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 473
Query: 105 ARARI 109
A+ RI
Sbjct: 474 AQGRI 478
>gi|354508008|ref|XP_003516046.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein
1-like, partial [Cricetulus griseus]
Length = 237
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E++QV +P AVG +IGK G IK+L T A ++ D R +++G P+ +
Sbjct: 15 EMVQVFIPAQAVGAIIGKKGQHIKQLSRFTSASIKIAPPETPDSKVRMVIITGPPEAQFK 74
Query: 105 ARARI 109
A+ RI
Sbjct: 75 AQGRI 79
>gi|350591798|ref|XP_003483335.1| PREDICTED: replication factor C (activator 1) 4, 37kDa [Sus scrofa]
Length = 578
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E++ + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 407 EIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 466
Query: 105 ARARI 109
A+ RI
Sbjct: 467 AQGRI 471
>gi|345796405|ref|XP_535832.3| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2
isoform 2 [Canis lupus familiaris]
Length = 531
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E++ + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 360 EIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 419
Query: 105 ARARI 109
A+ RI
Sbjct: 420 AQGRI 424
>gi|326378263|gb|ADZ57231.1| neuro-oncological ventral antigen [Branchiostoma floridae]
Length = 511
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 6/72 (8%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQ 103
V+++ VP+ VG ++GKGG + + Q +GAR+Q + E P ++R+ ++G+P Q
Sbjct: 428 VVELEVPENLVGAILGKGGKTLVEFQEYSGARIQISKKGEFTPGTNNRKVTITGTPAATQ 487
Query: 104 EA----RARIEE 111
A RARI +
Sbjct: 488 TAQYLVRARIAQ 499
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 24 GNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM 83
GN + N G+G E +++V +P A G +IGKGG I +LQ ETGA ++ +
Sbjct: 48 GNSKRSNFGGEGGP---EDGQLLLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKS 104
Query: 84 REDDP--SDRRCMLSGSPDQVQEARARIEELI 113
+ P ++R +++GS D ++ + E I
Sbjct: 105 NDFYPGTTERIVVITGSEDSLKSVHKFLMEKI 136
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCMLSGSPDQVQE 104
+++ VP + G++IGKGG IK + +TG+RVQ Q + + +R ++G P+Q +
Sbjct: 160 VKIVVPNSTAGLIIGKGGATIKFIMEQTGSRVQISQKATNGINLPERVITITGEPEQNDK 219
Query: 105 ARARI 109
A A I
Sbjct: 220 ACAFI 224
>gi|332215033|ref|XP_003256641.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 4 [Nomascus leucogenys]
gi|397470079|ref|XP_003806661.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Pan paniscus]
gi|179479950|gb|ACB86627.1| insulin-like 2 growth factor 2-binding protein 2 [Homo sapiens]
Length = 493
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E++ + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 322 EIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 381
Query: 105 ARARI 109
A+ RI
Sbjct: 382 AQGRI 386
>gi|197101075|ref|NP_001125573.1| insulin-like growth factor 2 mRNA-binding protein 2 [Pongo abelii]
gi|75041981|sp|Q5RB68.1|IF2B2_PONAB RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 2;
Short=IGF2 mRNA-binding protein 2; Short=IMP-2; AltName:
Full=IGF-II mRNA-binding protein 2; AltName: Full=VICKZ
family member 2
gi|55728499|emb|CAH90992.1| hypothetical protein [Pongo abelii]
Length = 556
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E++ + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 385 EIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 444
Query: 105 ARARI 109
A+ RI
Sbjct: 445 AQGRI 449
>gi|431838851|gb|ELK00780.1| Insulin-like growth factor 2 mRNA-binding protein 2 [Pteropus
alecto]
Length = 820
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E++ + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 649 EIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 708
Query: 105 ARARI 109
A+ RI
Sbjct: 709 AQGRI 713
>gi|149030755|gb|EDL85792.1| rCG51933, isoform CRA_d [Rattus norvegicus]
Length = 189
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 51/79 (64%), Gaps = 6/79 (7%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCML-SGSPDQVQEA 105
I++ VP+ AV ++IG+ G IK+L+ +TGAR + + +D D R +L SG P QV +A
Sbjct: 55 IEMRVPQEAVKLIIGRQGANIKQLRKQTGAR---IDVDTEDVGDERVLLISGFPVQVCKA 111
Query: 106 RARIEELI--DSVMVEQFS 122
+A I +++ ++ + EQ S
Sbjct: 112 KAAIHQILTENTPVFEQLS 130
>gi|400598823|gb|EJP66530.1| KH domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 539
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 37/69 (53%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+Q+ VP VG++IG+GG+ I+ LQ +G + V + R L G+P A+
Sbjct: 258 MQIMVPDRTVGLIIGRGGETIRDLQERSGCHINIVHESKSVNGLRPVNLIGTPTATARAK 317
Query: 107 ARIEELIDS 115
I E++DS
Sbjct: 318 ESILEIVDS 326
Score = 42.7 bits (99), Expect = 0.045, Method: Composition-based stats.
Identities = 27/103 (26%), Positives = 53/103 (51%), Gaps = 9/103 (8%)
Query: 14 QGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNE 73
+G G++ DN + N DG G + + + VP AVG++IGKGG+ I+++Q +
Sbjct: 350 RGGGQSRDNH---FQHNNPYDGPGKVTDAIY------VPSDAVGMIIGKGGETIREIQAQ 400
Query: 74 TGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELIDSV 116
++ R L G+P+ ++ A+ I+E ++++
Sbjct: 401 AECKINVAPSSGPGEVQREISLIGAPESIERAKQLIDEKVEAM 443
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 27/98 (27%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 17 GRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGA 76
GR++ G R+ + G GG + E IQ+ + VG++IG+ G+ +++++ E+
Sbjct: 137 GRHSPRGGKGRDRSPLRSGGGG--DENSETIQI--ESSLVGLIIGRNGENLRRIEGESNC 192
Query: 77 RVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
RVQF+ + P R+C ++G + E + I +I+
Sbjct: 193 RVQFLSPADGGPF-RQCRITGPAPRRAEVKDAINRIIE 229
>gi|148235415|ref|NP_001088559.1| protein bicaudal C homolog 1-B [Xenopus laevis]
gi|82180046|sp|Q5U4T7.1|BIC1B_XENLA RecName: Full=Protein bicaudal C homolog 1-B; Short=Bic-C-B
gi|54648555|gb|AAH84957.1| LOC495436 protein [Xenopus laevis]
Length = 970
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 59 VIGKGGDMIKKLQNETGARVQFVQMREDDPSDR--RCMLSGSPDQVQEARARIEELIDSV 116
VIGKGG+ IKK+ ETG + F ++ +++ + ++G P V+ AR RI EL+ V
Sbjct: 145 VIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVESARVRIRELLPLV 204
Query: 117 MV 118
++
Sbjct: 205 LM 206
>gi|68071447|ref|XP_677637.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56497827|emb|CAH98378.1| conserved hypothetical protein [Plasmodium berghei]
Length = 337
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
++ VPK+AV +IGKGG IK+LQN TG ++Q + RE +R + G + +++
Sbjct: 109 RIVVPKSAVSAIIGKGGYQIKQLQNITGTKIQ-ISNREYGLYERIITIVGPFESIKDTAT 167
Query: 108 RI 109
++
Sbjct: 168 KV 169
>gi|147789223|emb|CAN69138.1| hypothetical protein VITISV_022038 [Vitis vinifera]
Length = 569
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 42 VTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQ 101
+T +++ +P+ +G V G+ G+ + +L+ +GA+V + R SDR ++SG+PD+
Sbjct: 487 ITNTTVEIVIPENVIGSVYGENGNNLARLRKISGAKVTLHEPRPGT-SDRIVIISGTPDE 545
Query: 102 VQEARARIEELIDS 115
Q A++ ++ I +
Sbjct: 546 TQAAQSLLQAFIHT 559
>gi|395839827|ref|XP_003792777.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Otolemur garnettii]
Length = 554
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E++ + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 383 EIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 442
Query: 105 ARARI 109
A+ RI
Sbjct: 443 AQGRI 447
>gi|332215031|ref|XP_003256640.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Nomascus leucogenys]
Length = 556
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E++ + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 385 EIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 444
Query: 105 ARARI 109
A+ RI
Sbjct: 445 AQGRI 449
>gi|301759725|ref|XP_002915743.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 2 [Ailuropoda melanoleuca]
Length = 556
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E++ + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 385 EIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 444
Query: 105 ARARI 109
A+ RI
Sbjct: 445 AQGRI 449
>gi|296808217|ref|XP_002844447.1| P-element somatic inhibitor [Arthroderma otae CBS 113480]
gi|238843930|gb|EEQ33592.1| P-element somatic inhibitor [Arthroderma otae CBS 113480]
Length = 570
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 8/93 (8%)
Query: 27 REFNENGD------GRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQF 80
R + + GD RG E E I++ VG++IG+ G+ +++++NETGARVQF
Sbjct: 165 RHYRKAGDRSPPPRNRGSGPEDNSETIEID--NKYVGLIIGRQGENLRRIENETGARVQF 222
Query: 81 VQMREDDPSDRRCMLSGSPDQVQEARARIEELI 113
+ E + + R L+GS +A+A I+ ++
Sbjct: 223 LDSAEHNKTIRLYRLTGSKLVRDKAKAEIDRVV 255
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
++ +PK AVG+VIGKGG+ I++LQ+ +G ++ + + +P +R GS + A+
Sbjct: 387 KIFIPKEAVGMVIGKGGETIRELQSFSGCKINILPLVGREP-EREVTFYGSQTAIDAAKR 445
Query: 108 RIEELIDSVMVEQFSGANFD 127
+ +++ + + GA D
Sbjct: 446 AVMAKVEAALKNRSQGARRD 465
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+++ VP VG+VIG+ G+ ++ L +G R+ + E R L+GS Q+A
Sbjct: 287 MKIMVPDRTVGLVIGRSGETVRDLAERSGCRINIARDGESINGLRPVTLTGS----QQAM 342
Query: 107 ARIEELI 113
R +ELI
Sbjct: 343 QRAKELI 349
>gi|56118219|ref|NP_001007226.1| insulin-like growth factor 2 mRNA-binding protein 2 isoform b [Homo
sapiens]
gi|4883681|gb|AAD31596.1|AF057352_1 hepatocellular carcinoma autoantigen [Homo sapiens]
gi|119598615|gb|EAW78209.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_a
[Homo sapiens]
gi|410223072|gb|JAA08755.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410251294|gb|JAA13614.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410302888|gb|JAA30044.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410342485|gb|JAA40189.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
Length = 556
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E++ + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 385 EIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 444
Query: 105 ARARI 109
A+ RI
Sbjct: 445 AQGRI 449
>gi|390474894|ref|XP_002758191.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Callithrix jacchus]
Length = 1052
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E++ + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 881 EIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 940
Query: 105 ARARI 109
A+ RI
Sbjct: 941 AQGRI 945
>gi|380812326|gb|AFE78037.1| heterogeneous nuclear ribonucleoprotein K isoform a [Macaca
mulatta]
Length = 459
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEA 105
QV +PK G +IGKGG IK++++E+GA ++ + E DR ++G+ DQ+Q A
Sbjct: 384 TTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRIITITGTQDQIQNA 442
Query: 106 RARIE 110
+ ++
Sbjct: 443 QYLLQ 447
>gi|326513114|dbj|BAK06797.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 627
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 6/107 (5%)
Query: 27 REFNENGDGRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMR 84
R F+ NG G + V E++ +C+ VG VIGKGG I+ LQ+ETGA V+ +
Sbjct: 233 RNFSSNGAAPGPRFFVEQEIVFRMICL-NDMVGGVIGKGGSTIRALQSETGASVKVIDPV 291
Query: 85 EDDPSDRRCMLSGSPDQVQEARARIEELIDSVMVEQFSGANFDKLRS 131
D SD R ++ + + + R+ ++ + V + S A+ DK S
Sbjct: 292 AD--SDERIIVISARENSEMMRSPSQDALLRVY-SKISEASMDKSSS 335
Score = 36.6 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 56 VGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSG 97
VG V+GKGG +++++ E+GA+++ + RE P C L G
Sbjct: 121 VGCVLGKGGKTVERMRQESGAQIRVFRNREQVPP---CALQG 159
>gi|291400301|ref|XP_002716510.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2-like
isoform 2 [Oryctolagus cuniculus]
Length = 556
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E++ + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 385 EIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 444
Query: 105 ARARI 109
A+ RI
Sbjct: 445 AQGRI 449
>gi|37589626|gb|AAH59161.1| Tdrkh protein [Rattus norvegicus]
gi|149030753|gb|EDL85790.1| rCG51933, isoform CRA_b [Rattus norvegicus]
Length = 296
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I++ VP+ AV ++IG+ G IK+L+ +TGAR+ ED +R ++SG P QV +A+
Sbjct: 55 IEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDT--EDVGDERVLLISGFPVQVCKAK 112
Query: 107 ARIEELI--DSVMVEQFS 122
A I +++ ++ + EQ S
Sbjct: 113 AAIHQILTENTPVFEQLS 130
>gi|296491333|tpg|DAA33396.1| TPA: insulin-like growth factor 2 mRNA binding protein 2 isoform 2
[Bos taurus]
Length = 556
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E++ + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 385 EIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 444
Query: 105 ARARI 109
A+ RI
Sbjct: 445 AQGRI 449
>gi|149043812|gb|EDL97263.1| bicaudal C homolog 1 (Drosophila) (predicted), isoform CRA_a
[Rattus norvegicus]
Length = 870
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 59 VIGKGGDMIKKLQNETGARVQFVQMREDDPSDR--RCMLSGSPDQVQEARARIEELIDSV 116
VIGKGG+ IKK+ +TG + F ++ ++ + ++G P V+ ARARI EL+ V
Sbjct: 67 VIGKGGNNIKKVMEDTGCHIHFPDSNRNNQVEKSNQVSIAGQPAGVESARARIRELLPLV 126
Query: 117 MV 118
++
Sbjct: 127 LM 128
>gi|157818393|ref|NP_001102001.1| protein bicaudal C homolog 1 [Rattus norvegicus]
gi|149043813|gb|EDL97264.1| bicaudal C homolog 1 (Drosophila) (predicted), isoform CRA_b
[Rattus norvegicus]
Length = 898
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 59 VIGKGGDMIKKLQNETGARVQFVQMREDDPSDR--RCMLSGSPDQVQEARARIEELIDSV 116
VIGKGG+ IKK+ +TG + F ++ ++ + ++G P V+ ARARI EL+ V
Sbjct: 67 VIGKGGNNIKKVMEDTGCHIHFPDSNRNNQVEKSNQVSIAGQPAGVESARARIRELLPLV 126
Query: 117 MV 118
++
Sbjct: 127 LM 128
>gi|327279520|ref|XP_003224504.1| PREDICTED: protein bicaudal C homolog 1-like [Anolis carolinensis]
Length = 1109
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 59 VIGKGGDMIKKLQNETGARVQFVQMREDDPSDR--RCMLSGSPDQVQEARARIEELIDSV 116
VIGKGG+ IKK+ ETG + F ++ +++ + ++G P V+ AR RI EL+ V
Sbjct: 281 VIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVESARVRIRELLPLV 340
Query: 117 MV 118
++
Sbjct: 341 LM 342
>gi|238836386|gb|ACR61401.1| IGF-II mRNA-binding protein 2a variant B [Danio rerio]
Length = 542
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
EV+ + +P AVG +IGK G IK+L GA ++ D + R +++G P+ +
Sbjct: 435 EVVYLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAESPDVTQRMVIITGPPEAQFK 494
Query: 105 ARARI 109
A+ RI
Sbjct: 495 AQGRI 499
>gi|295669238|ref|XP_002795167.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226285101|gb|EEH40667.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 280
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ +P AVG++IGKGGD IK++Q TG R+ D ++R L GS ++EA+
Sbjct: 113 IYIPPDAVGMIIGKGGDTIKEMQAITGCRINIQSPVGRD-AEREVTLVGSRGAIEEAKRM 171
Query: 109 IEELIDS 115
I E I+S
Sbjct: 172 IMEKIES 178
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
+ +++ VP VG++IG+GG+ I+ LQ +G V V + R L GSP+ +
Sbjct: 10 DAVRIMVPDRTVGLIIGRGGETIRDLQERSGCHVNIVNESKSVNGLRPVNLIGSPEATER 69
Query: 105 ARARIEELIDS 115
A+ I E+++S
Sbjct: 70 AKNFILEIVES 80
>gi|432114339|gb|ELK36267.1| Tudor and KH domain-containing protein [Myotis davidii]
Length = 510
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I++ VP+ AV +IG+ G IK+L+ +TGAR+ ED +R ++SG P QV +A+
Sbjct: 55 IEMRVPQEAVKFIIGRQGANIKQLRKQTGARIDVDT--EDVGDERVLLISGFPVQVCKAK 112
Query: 107 ARIEELI 113
A I +++
Sbjct: 113 AAIHQIL 119
>gi|302767378|ref|XP_002967109.1| hypothetical protein SELMODRAFT_87147 [Selaginella moellendorffii]
gi|300165100|gb|EFJ31708.1| hypothetical protein SELMODRAFT_87147 [Selaginella moellendorffii]
Length = 506
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 42/65 (64%), Gaps = 5/65 (7%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP-SDRRCM-LSGSPDQVQ 103
V ++ P A +G VIGKGG +IK L+NETGA+ +++ + P SD R + +S SP + +
Sbjct: 47 VYRILCPGAKIGSVIGKGGSIIKSLRNETGAK---IKVADGIPGSDERVIFISASPRERR 103
Query: 104 EARAR 108
E + R
Sbjct: 104 EGKPR 108
>gi|197127216|gb|ACH43714.1| putative neuro-oncological ventral antigen 1-like protein
[Taeniopygia guttata]
Length = 220
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNA 111
Query: 105 ARARIEELI 113
I E I
Sbjct: 112 VHGFIAEKI 120
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
+++ VP + G++IGKGG +K + ++GA VQ Q + + +R +SG P+Q ++A
Sbjct: 150 VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 209
>gi|189200062|ref|XP_001936368.1| far upstream element-binding protein 2 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187983467|gb|EDU48955.1| far upstream element-binding protein 2 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 572
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
Q+ VP VG++IG+GG+ I+ LQ +G V V + R L GSP A+
Sbjct: 309 QIMVPDRTVGLIIGRGGETIRDLQERSGCHVNIVGENKSVNGLRPVNLIGSPTAAAHAKE 368
Query: 108 RIEELIDS 115
I E++DS
Sbjct: 369 LIMEIVDS 376
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ VP AVG++IGKGG+ IK +Q+ETG ++ Q D +R L G+ + +A+
Sbjct: 422 IHVPSDAVGMIIGKGGETIKSMQSETGCKINVSQASGAD-IEREIGLVGTRQAIDDAKRA 480
Query: 109 IEELIDSV 116
I E +D V
Sbjct: 481 IWEKVDQV 488
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ + + VG+VIG+ G+ +++++ E+ R+QF+ E P R C ++GSP A+
Sbjct: 209 ILIDSSLVGLVIGRQGESLRRIEQESQTRIQFINGPESGP-QRECRITGSPGARISAKRE 267
Query: 109 IEELID 114
I +I+
Sbjct: 268 INRIIE 273
>gi|387915114|gb|AFK11166.1| heterogeneous nuclear ribonucleoprotein K [Callorhinchus milii]
Length = 436
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
QV +PK G +IGKGG IK++++E+GA ++ + E DR ++G+ DQ+Q A+
Sbjct: 365 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRIITITGTQDQIQNAQ 422
>gi|171682394|ref|XP_001906140.1| hypothetical protein [Podospora anserina S mat+]
gi|170941156|emb|CAP66806.1| unnamed protein product [Podospora anserina S mat+]
Length = 1264
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMR--------EDDPSDRRCMLSGS 98
I+V +P++ VIGKGG IK LQ +TGAR+Q ++ EDD S ++ G+
Sbjct: 207 IKVSIPRSTRAHVIGKGGSTIKALQEKTGARIQMPRVEDAPAAAEDEDDDSTIDVLIEGN 266
Query: 99 PDQVQEARARI 109
Q AR I
Sbjct: 267 SQQAAAARNAI 277
>gi|426217762|ref|XP_004003121.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Ovis aries]
Length = 556
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E++ + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 385 EIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 444
Query: 105 ARARI 109
A+ RI
Sbjct: 445 AQGRI 449
>gi|148223549|ref|NP_001081996.1| protein bicaudal C homolog 1-A [Xenopus laevis]
gi|82115500|sp|Q9IA00.1|BIC1A_XENLA RecName: Full=Protein bicaudal C homolog 1-A; Short=Bic-C-A
gi|7800180|gb|AAF69826.1|AF224746_1 bicaudal-C [Xenopus laevis]
Length = 963
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 59 VIGKGGDMIKKLQNETGARVQFVQMREDDPSDR--RCMLSGSPDQVQEARARIEELIDSV 116
VIGKGG+ IKK+ ETG + F ++ +++ + ++G P V+ AR RI EL+ V
Sbjct: 143 VIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVESARVRIRELLPLV 202
Query: 117 MV 118
++
Sbjct: 203 LM 204
>gi|410970837|ref|XP_003991883.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Felis catus]
Length = 493
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E++ + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 322 EIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 381
Query: 105 ARARI 109
A+ RI
Sbjct: 382 AQGRI 386
>gi|224113143|ref|XP_002316405.1| predicted protein [Populus trichocarpa]
gi|222865445|gb|EEF02576.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Query: 50 CVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQEARA 107
V AA G VIGKGG I Q+++GAR+Q + E P SDR M+SG D V +A
Sbjct: 40 LVSNAAAGSVIGKGGATITDFQSQSGARIQLSRNYEFFPGTSDRIIMVSGGIDDVLKA-- 97
Query: 108 RIEELIDSVMVE 119
+E +I ++ E
Sbjct: 98 -VELIIAKLLSE 108
>gi|213625320|gb|AAI70337.1| Bic-C protein [Xenopus laevis]
Length = 964
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 59 VIGKGGDMIKKLQNETGARVQFVQMREDDPSDR--RCMLSGSPDQVQEARARIEELIDSV 116
VIGKGG+ IKK+ ETG + F ++ +++ + ++G P V+ AR RI EL+ V
Sbjct: 143 VIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVESARVRIRELLPLV 202
Query: 117 MV 118
++
Sbjct: 203 LM 204
>gi|189239274|ref|XP_969642.2| PREDICTED: similar to conserved hypothetical protein [Tribolium
castaneum]
Length = 1494
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG + LQ E+GA++ + E D + R LSG+ D V +A + I
Sbjct: 926 VPSKFVGKIIGRGGSKVNDLQFESGAKINITKETEGDETFIR--LSGTNDAVSKAESLIR 983
Query: 111 EL 112
EL
Sbjct: 984 EL 985
>gi|395839831|ref|XP_003792779.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 4 [Otolemur garnettii]
Length = 574
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E++ + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 403 EIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 462
Query: 105 ARARI 109
A+ RI
Sbjct: 463 AQGRI 467
>gi|395839829|ref|XP_003792778.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Otolemur garnettii]
Length = 575
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E++ + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 404 EIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 463
Query: 105 ARARI 109
A+ RI
Sbjct: 464 AQGRI 468
>gi|345796407|ref|XP_003434167.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2
isoform 1 [Canis lupus familiaris]
Length = 488
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E++ + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 317 EIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 376
Query: 105 ARARI 109
A+ RI
Sbjct: 377 AQGRI 381
>gi|340521221|gb|EGR51456.1| predicted protein [Trichoderma reesei QM6a]
Length = 1270
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 32/47 (68%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
VIQV +P++ +IGKGG IK +Q +TGA++Q + E+ P DR+
Sbjct: 202 VIQVPIPQSTRPFIIGKGGATIKAIQEKTGAKIQMPKADENQPVDRQ 248
>gi|347968782|ref|XP_312014.5| AGAP002896-PA [Anopheles gambiae str. PEST]
gi|333467844|gb|EAA08028.5| AGAP002896-PA [Anopheles gambiae str. PEST]
Length = 537
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGS 98
VP A G +IGKGG+ I LQ + GARV+ + + P ++R C++SG+
Sbjct: 30 VPSVAAGAIIGKGGETIASLQKDAGARVKMSKAHDFYPGTTERICLISGT 79
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM 94
+++ VP G++IGK G IK+++ E+G+ VQ Q +D RC+
Sbjct: 119 VKILVPNTTAGMIIGKAGAYIKQIKEESGSYVQISQKPKDLTLQERCI 166
>gi|355746831|gb|EHH51445.1| hypothetical protein EGM_10814, partial [Macaca fascicularis]
Length = 542
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 36/65 (55%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
EV+ + +P AVG +IGK G IK+L GA ++ D S R +++G P+ +
Sbjct: 371 EVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSKRMVIITGPPEAQFK 430
Query: 105 ARARI 109
A+ RI
Sbjct: 431 AQGRI 435
>gi|258567330|ref|XP_002584409.1| predicted protein [Uncinocarpus reesii 1704]
gi|237905855|gb|EEP80256.1| predicted protein [Uncinocarpus reesii 1704]
Length = 558
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ +PK AVG++IGKGGD IK++Q TG +V + D +DR ++ GS + + +
Sbjct: 397 IFIPKEAVGMIIGKGGDTIKEMQTATGCKVNILPAVGRD-TDREVVMIGSRQSIDQMKRN 455
Query: 109 IEELIDS 115
I E +++
Sbjct: 456 ILEKVEA 462
Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 38/58 (65%)
Query: 56 VGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELI 113
VG++IG+ GD +++++++TG R+QF+ E + + R C ++G +A+A I +I
Sbjct: 197 VGLIIGRQGDNLRRIESDTGTRIQFLDSPESNINIRPCRITGPRAARNDAKAEIFRMI 254
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%)
Query: 38 GMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSG 97
G E Q+ VP VG++IG+GG+ IK LQ+ +G V + R LSG
Sbjct: 286 GYGEEENSTTQMMVPDRTVGLIIGRGGETIKDLQDRSGCHVIIAPEDKSLNGLRPVNLSG 345
Query: 98 SPDQVQEARARIEELIDS 115
+Q A+ I E++++
Sbjct: 346 PARAIQRAKDLILEVVET 363
>gi|345486914|ref|XP_001607400.2| PREDICTED: poly(rC)-binding protein 3-like [Nasonia vitripennis]
Length = 476
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGA--RVQFVQMREDDPSDRRCMLSGSPDQVQEA 105
++ VP +G +IGKGG I +++ +GA R+ + RE P+DR ++G+PD V A
Sbjct: 283 EMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGPTDRTITITGNPDSVALA 342
Query: 106 RARI 109
+ I
Sbjct: 343 QYLI 346
Score = 38.9 bits (89), Expect = 0.73, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 34/58 (58%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
+++ VP + G +IGKGG IK+++ TGA +Q + ++R +SG+ + + +
Sbjct: 114 LRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTISGTSEAITQ 171
>gi|332215035|ref|XP_003256642.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 5 [Nomascus leucogenys]
Length = 577
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E++ + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 406 EIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 465
Query: 105 ARARI 109
A+ RI
Sbjct: 466 AQGRI 470
>gi|402587695|gb|EJW81630.1| KH domain-containing protein [Wuchereria bancrofti]
Length = 273
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 52/94 (55%), Gaps = 6/94 (6%)
Query: 20 NDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQ 79
+D +G MR+ GR + QV +P G +IGKGG I +++ E+GA+++
Sbjct: 173 DDRYGGMRDMM----GRYSPIPA-MQTTQVTIPDELGGAIIGKGGSRINRVREESGAQIE 227
Query: 80 FVQMREDDPSDRRCMLSGSPDQVQEARARIEELI 113
V+ D+ DR +SG+ +Q+Q A+ +++ +
Sbjct: 228 -VEPHRDNGGDRIITISGTREQIQAAQYLLQQCV 260
>gi|384254002|gb|EIE27476.1| hypothetical protein COCSUDRAFT_64249 [Coccomyxa subellipsoidea
C-169]
Length = 632
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 28/67 (41%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
+V PK VG VIGKGG+ IK LQ GA +Q Q DP + ++G P V+ A A
Sbjct: 414 EVQCPKGMVGRVIGKGGETIKALQKNFGANIQIDQT--TDP--MKITIAGQPPAVESAAA 469
Query: 108 RIEELID 114
+ E+I+
Sbjct: 470 AVTEIIN 476
Score = 42.0 bits (97), Expect = 0.083, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 52 PKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEE 111
P+ VG +IG+GG+ I+ LQ + A + V + RR +SG PD V+ A + E
Sbjct: 331 PQGIVGRIIGRGGETIRALQQASQAHI-VVDQNYPEGEPRRVNISGRPDAVERAVKMVSE 389
Query: 112 LI 113
LI
Sbjct: 390 LI 391
Score = 39.3 bits (90), Expect = 0.48, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
+P VG +IGKGG+ IK+LQ T RVQ + + + + + S + VQ A+ ++E
Sbjct: 253 IPAPMVGKLIGKGGETIKQLQYNTNTRVQ-IDHQTPGEAKKVSIQGDSHEAVQAAKQQVE 311
Query: 111 ELI 113
+++
Sbjct: 312 QIV 314
>gi|297834004|ref|XP_002884884.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297330724|gb|EFH61143.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 245
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 7/102 (6%)
Query: 16 IGRNNDNFGNMREFNENGDGRGGMWEVTW----EVIQVCVPKAAVGVVIGKGGDMIKKLQ 71
+ RN GN F+ G G G V+ ++ V + G +IGKGG K++
Sbjct: 83 VSRNMQGSGNGGRFS--GRGESGPGHVSSFGASATAKISVDASLAGAIIGKGGVSSKQIC 140
Query: 72 NETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELI 113
+TGA++ +Q E DP+ + L G+ +Q+ EA A + ELI
Sbjct: 141 RQTGAKLS-IQDHERDPNLKNIELEGTFEQINEASAMVRELI 181
>gi|225682613|gb|EEH20897.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
gi|226290030|gb|EEH45514.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 308
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ +P AVG++IGKGGD IK++Q TG R+ D ++R L GS ++EA+
Sbjct: 141 IYIPPDAVGMIIGKGGDTIKEMQAITGCRINIQSPVGRD-AEREVTLVGSRGAIEEAKRM 199
Query: 109 IEELIDS 115
I E I+S
Sbjct: 200 IMEKIES 206
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
+ +++ VP VG++IG+GG+ I+ LQ +G V V + R L GSP+ +
Sbjct: 38 DAVRIMVPDRTVGLIIGRGGETIRDLQERSGCHVNIVNESKSINGLRPVNLIGSPEATER 97
Query: 105 ARARIEELIDS 115
A+ I E+++S
Sbjct: 98 AKNFILEIVES 108
>gi|351697348|gb|EHB00267.1| Poly(rC)-binding protein 3 [Heterocephalus glaber]
Length = 427
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+++ VP + G +IGKGG IK+++ TGA+VQ + ++R +SG+PD + +
Sbjct: 175 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCV 234
Query: 107 ARI 109
+I
Sbjct: 235 KQI 237
Score = 38.5 bits (88), Expect = 0.79, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 40/66 (60%), Gaps = 8/66 (12%)
Query: 56 VGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARI-----E 110
VG +IGK G+ +KK++ E+GAR + + E + +R ++G D + +A A I E
Sbjct: 100 VGSIIGKKGETVKKMREESGAR---INISEGNCPERIVTITGPTDAIFKAFAMIAYKFEE 156
Query: 111 ELIDSV 116
++I+S+
Sbjct: 157 DIINSM 162
>gi|326917277|ref|XP_003204927.1| PREDICTED: poly(rC)-binding protein 3-like [Meleagris gallopavo]
Length = 448
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+++ VP + G +IGKGG IK+++ TGA+VQ + ++R +SG+PD + +
Sbjct: 103 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCV 162
Query: 107 ARI 109
+I
Sbjct: 163 KQI 165
Score = 35.4 bits (80), Expect = 8.1, Method: Composition-based stats.
Identities = 16/71 (22%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
++ +P +G +IG+ G I +++ +GA+++ E ++R+ ++GSP + A+
Sbjct: 270 ELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANATEGS-AERQVTITGSPANISLAQY 328
Query: 108 RIEELIDSVMV 118
I ++ V
Sbjct: 329 LINASLEMAKV 339
>gi|134026176|gb|AAI35317.1| LOC733863 protein [Xenopus (Silurana) tropicalis]
Length = 475
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+++ VP + G +IGKGG IK+++ TGA+VQ + ++R +SG+PD + +
Sbjct: 103 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCV 162
Query: 107 ARI 109
+I
Sbjct: 163 KQI 165
>gi|118086587|ref|XP_419049.2| PREDICTED: poly(rC)-binding protein 3 [Gallus gallus]
Length = 448
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+++ VP + G +IGKGG IK+++ TGA+VQ + ++R +SG+PD + +
Sbjct: 103 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCV 162
Query: 107 ARI 109
+I
Sbjct: 163 KQI 165
Score = 35.4 bits (80), Expect = 8.1, Method: Composition-based stats.
Identities = 16/71 (22%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
++ +P +G +IG+ G I +++ +GA+++ E ++R+ ++GSP + A+
Sbjct: 270 ELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANATEGS-AERQVTITGSPANISLAQY 328
Query: 108 RIEELIDSVMV 118
I ++ V
Sbjct: 329 LINASLEMAKV 339
>gi|396464595|ref|XP_003836908.1| similar to far upstream element-binding protein 2 [Leptosphaeria
maculans JN3]
gi|312213461|emb|CBX93543.1| similar to far upstream element-binding protein 2 [Leptosphaeria
maculans JN3]
Length = 572
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
Q+ VP VG++IG+GG+ I+ LQ +G V V + R L GSP A+
Sbjct: 317 QIMVPDRTVGLIIGRGGETIRDLQERSGCHVNIVGENKSVNGLRPVNLIGSPAAAAHAKE 376
Query: 108 RIEELIDS 115
I E++DS
Sbjct: 377 LIMEIVDS 384
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ VP AVG++IGKGG+ IK +Q++TG ++ Q D +R L G+ +++A+
Sbjct: 428 ILVPSDAVGMIIGKGGETIKTMQSDTGCKINVSQASGAD-IEREIGLVGTRQAIEDAKRA 486
Query: 109 IEELIDSV 116
I E +D V
Sbjct: 487 IWEKVDQV 494
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ + + VG+VIG+ G+ +++++ E+ R+QF+ E P R+C ++GSP A+
Sbjct: 216 ILIDSSLVGLVIGRQGESLRRIEQESQTRIQFINGPESGP-QRQCRITGSPSARISAKRE 274
Query: 109 IEELID 114
I +I+
Sbjct: 275 INRIIE 280
>gi|303290180|ref|XP_003064377.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226453975|gb|EEH51282.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 866
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG+VIG+GG+ I+ LQ +T A +Q +Q S+R + G+ D EA I+
Sbjct: 743 VPHKKVGLVIGRGGENIRFLQQQTRAHIQ-IQAESFGNSERLVCVRGTRDACAEAGRMIQ 801
Query: 111 ELIDSVM 117
++ID ++
Sbjct: 802 DMIDGLL 808
>gi|46135951|ref|XP_389667.1| hypothetical protein FG09491.1 [Gibberella zeae PH-1]
Length = 1225
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 43 TWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSD 90
T I+V +P++ +IGKGG MIK LQ +TGA++Q ++ E++P D
Sbjct: 198 TRTAIKVPIPQSTRAHIIGKGGSMIKALQEKTGAKIQLPKVDENNPID 245
Score = 36.2 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
V V + VG +IG+GG + +L+ TGAR+ Q R+ + + + G+ QV +A+
Sbjct: 818 VSVKQKQVGSLIGQGGAALDELRQATGARIDVPQDRDTEIVE--IQIKGTASQVAKAKKV 875
Query: 109 IEE 111
+EE
Sbjct: 876 LEE 878
>gi|355707679|gb|AES03031.1| neuro-oncological ventral antigen 1 [Mustela putorius furo]
Length = 179
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNA 111
Query: 105 ARARIEELI 113
I E I
Sbjct: 112 VHGFIAEKI 120
>gi|255085190|ref|XP_002505026.1| predicted protein [Micromonas sp. RCC299]
gi|226520295|gb|ACO66284.1| predicted protein [Micromonas sp. RCC299]
Length = 559
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 25/69 (36%), Positives = 43/69 (62%), Gaps = 6/69 (8%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+ V VP +G VIG+GG+ I++LQ E+GAR+Q E D + R ++ GS D Q A+
Sbjct: 336 LDVPVPAEMLGRVIGRGGETIRRLQEESGARIQV----ERDAN--RVVIRGSADNAQRAK 389
Query: 107 ARIEELIDS 115
+ +++++
Sbjct: 390 ELVLDIVNT 398
Score = 35.8 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Query: 57 GVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
G +IGKGGD I++L TGA++Q D + G +QV A A ++ +ID
Sbjct: 424 GKIIGKGGDSIRELCARTGAKIQI------DKDAATVTIQGKQEQVDAAIALVQAIID 475
Score = 35.0 bits (79), Expect = 9.1, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSD--RRCMLSGSPDQVQEA 105
+V P + G +IG GGD I +Q ++GA V+ +Q + P+ RR +SG+ V +A
Sbjct: 238 EVMCPASCAGKIIGHGGDTIMSIQKKSGAHVK-IQPAHEVPAGAPRRIDISGAAGPVADA 296
Query: 106 RARIEELI 113
+ +++
Sbjct: 297 LQMVNDIL 304
>gi|392873506|gb|AFM85585.1| heterogeneous nuclear ribonucleoprotein K [Callorhinchus milii]
Length = 424
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
QV +PK G +IGKGG IK++++E+GA ++ + E DR ++G+ DQ+Q A+
Sbjct: 353 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRIITITGTQDQIQNAQ 410
>gi|294462548|gb|ADE76820.1| unknown [Picea sitchensis]
Length = 340
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 52/93 (55%), Gaps = 8/93 (8%)
Query: 23 FGNMREFNENGDGRGGM---WEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQ 79
+G+ F+ + GG+ + ++V +P +VG ++G+GG I +++ +GA+
Sbjct: 236 YGSFSSFSTSRAPAGGLPAGVAKSGSTVEVTIPNKSVGSILGRGGSNISQIREISGAK-- 293
Query: 80 FVQMREDDP--SDRRCMLSGSPDQVQEARARIE 110
V++ E P +DR +SG+P+Q A++ ++
Sbjct: 294 -VKLHESKPGGTDRVVEISGTPEQTHAAQSLLQ 325
>gi|405957186|gb|EKC23416.1| RNA-binding protein Nova-1 [Crassostrea gigas]
Length = 561
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+++ VP + G+VIGKGG+ IK+++ E+GA +Q Q ++ RC+ ++ R
Sbjct: 122 VKILVPNSTAGMVIGKGGNYIKQIKEESGAYIQISQKSKETNLPERCITVAG--EIDNNR 179
Query: 107 ARIEELIDSVMVEQFSGA 124
+E ++ ++ + SG+
Sbjct: 180 KAVELILQKIVEDPQSGS 197
>gi|268576715|ref|XP_002643337.1| Hypothetical protein CBG15931 [Caenorhabditis briggsae]
Length = 840
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 37/59 (62%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARI 109
VP A G+VIGKGGD+IK++ ++GAR + + + D + +L G+ Q++ A+ I
Sbjct: 433 VPAAKCGLVIGKGGDVIKQINADSGARCELARETKMDAHFKTFVLRGTDLQIEHAKHLI 491
Score = 40.0 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQE 104
+ V VP+++VG ++G G IK+L ++T + + E+DP +R + GSPD+V
Sbjct: 349 LHVKVPRSSVGAIMGPQGMNIKRLSDQTCTSIHV--LPEEDPKVMERLITIVGSPDKVYL 406
Query: 105 ARARIEELIDS 115
A I +I S
Sbjct: 407 AADVIRTIITS 417
Score = 39.3 bits (90), Expect = 0.51, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 38/67 (56%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+++ +P G VIG+GGD ++KL++ + ++Q +Q + + ++G V+ A+
Sbjct: 255 VEIPIPAHKCGAVIGRGGDTMQKLRSWSNCQIQLIQENSMPTTTKPLRITGDQQSVEYAQ 314
Query: 107 ARIEELI 113
+ E++
Sbjct: 315 RLVAEVL 321
Score = 39.3 bits (90), Expect = 0.56, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
+P+ VG+VIGKGG + + +TG R+Q V R + G P+ + AR I
Sbjct: 167 IPELCVGLVIGKGGAEVHAINEKTGCRLQ-VSTEPSPIGYRNVEIHGLPENIDAARECIS 225
Query: 111 ELIDSV 116
++++ +
Sbjct: 226 QVLNRI 231
>gi|308813552|ref|XP_003084082.1| RNA-binding protein VgRBP71 (ISS) [Ostreococcus tauri]
gi|116055965|emb|CAL58498.1| RNA-binding protein VgRBP71 (ISS) [Ostreococcus tauri]
Length = 509
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
+P VG+VIG+ G + +QN TG R+ + D + RR + G P++ +EA A I
Sbjct: 102 IPNGKVGLVIGREGRHVGFVQNRTGTRISIARDSWDG-AKRRVEIEGPPERCREAVAMIH 160
Query: 111 ELIDS 115
LID+
Sbjct: 161 RLIDT 165
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP 88
+P VG++IG+GGD +K +Q T AR+Q +Q + P
Sbjct: 250 IPHTKVGMIIGRGGDNVKYIQQRTRARIQ-IQTDAETP 286
>gi|238836390|gb|ACR61403.1| IGF-II mRNA-binding protein 2a variant D [Danio rerio]
Length = 388
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
EV+ + +P AVG +IGK G IK+L GA ++ D + R +++G P+ +
Sbjct: 281 EVVYLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAESPDVTQRMVIITGPPEAQFK 340
Query: 105 ARARI 109
A+ RI
Sbjct: 341 AQGRI 345
>gi|119574563|gb|EAW54178.1| hCG2024326, isoform CRA_c [Homo sapiens]
Length = 881
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 59 VIGKGGDMIKKLQNETGARVQFVQMRED---DPSDRRCMLSGSPDQVQEARARIEELIDS 115
VIGKGG+ IKK+ ETG + F + + S++ ++G P V+ AR RI EL+
Sbjct: 147 VIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEKSNQVVSIAGQPAGVESARVRIRELLPL 206
Query: 116 VMV 118
V++
Sbjct: 207 VLM 209
>gi|384251533|gb|EIE25010.1| hypothetical protein COCSUDRAFT_65061 [Coccomyxa subellipsoidea
C-169]
Length = 563
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 9/87 (10%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+ + PK+ VG VIGKGG+ IK LQ TGA +Q Q DP+ R + G +Q A
Sbjct: 34 LSIMCPKSMVGRVIGKGGETIKALQQYTGAMIQIDQ--SQDPT--RVTIVGKQGSMQTAA 89
Query: 107 ARIEELIDS-----VMVEQFSGANFDK 128
+ ++++++ M+ Q + DK
Sbjct: 90 SMVKDIVEGNFKGFAMLRQMTLTQADK 116
>gi|332028589|gb|EGI68626.1| Putative ATP-dependent RNA helicase DDX43 [Acromyrmex echinatior]
Length = 660
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 15/115 (13%)
Query: 5 EFQQSRRWQQGIGRNND------NFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGV 58
E Q RR + G NND N + R+ +E DG G+ + + + +G
Sbjct: 30 ESQFYRRSNRSFGDNNDSSRQKYNNDSYRKSDEKSDGTNGLV--------MYIDSSNIGR 81
Query: 59 VIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELI 113
+IG+GG IK LQ ++GAR+ + + ++ L+G+ D Q A+ I+EL+
Sbjct: 82 LIGRGGSKIKALQEDSGARIN-IDKQYNENGQSAVTLTGTDDAQQRAKNLIKELL 135
>gi|330912641|ref|XP_003296022.1| hypothetical protein PTT_04425 [Pyrenophora teres f. teres 0-1]
gi|311332173|gb|EFQ95883.1| hypothetical protein PTT_04425 [Pyrenophora teres f. teres 0-1]
Length = 577
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ VP AVG++IGKGG+ IK +Q+ETG ++ Q D +R L G+ + +A+
Sbjct: 426 IHVPSDAVGMIIGKGGETIKSMQSETGCKINVSQASGAD-IEREIGLVGTRQAIDDAKRA 484
Query: 109 IEELIDSV 116
I E +D V
Sbjct: 485 IWEKVDQV 492
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
Q+ VP VG++IG+GG+ I+ LQ +G V V + R L GSP A+
Sbjct: 313 QIMVPDRTVGLIIGRGGETIRDLQERSGCHVNIVGENKSVNGLRPVNLIGSPTAAAHAKE 372
Query: 108 RIEELIDS 115
I E++DS
Sbjct: 373 LIMEIVDS 380
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ + + VG+VIG+ G+ +++++ E+ R+QF+ E P R C ++GSP A+
Sbjct: 213 ILIDSSLVGLVIGRQGESLRRIEQESQTRIQFINGPESGP-QRECRITGSPGARISAKRE 271
Query: 109 IEELID 114
I +I+
Sbjct: 272 INRIIE 277
>gi|426197247|gb|EKV47174.1| hypothetical protein AGABI2DRAFT_221059 [Agaricus bisporus var.
bisporus H97]
Length = 1238
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEA 105
VI+ VP A+ ++G+GG I ++++ TGA V + DDP+ + G+ + + +A
Sbjct: 806 VIKFAVPSRAIARILGRGGASINEIKDLTGAIVD-IDKSSDDPNTTNISVRGTKEAINDA 864
Query: 106 RARIEELIDSV 116
+A+I E+ +SV
Sbjct: 865 KAQIMEIANSV 875
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQF 80
V+ V VP A V+IG+GG + +LQ +TGA++QF
Sbjct: 961 VLAVEVPSAQHRVLIGRGGQHLNELQEKTGAQIQF 995
>gi|409080346|gb|EKM80706.1| hypothetical protein AGABI1DRAFT_55738 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1238
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEA 105
VI+ VP A+ ++G+GG I ++++ TGA V + DDP+ + G+ + + +A
Sbjct: 806 VIKFAVPSRAIARILGRGGASINEIKDLTGAIVD-IDKSSDDPNTTNISVRGTKEAINDA 864
Query: 106 RARIEELIDSV 116
+A+I E+ +SV
Sbjct: 865 KAQIMEIANSV 875
Score = 36.6 bits (83), Expect = 3.3, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQF 80
V+ V VP A V+IG+GG + +LQ +TGA++QF
Sbjct: 961 VLAVEVPSAQHRVLIGRGGQHLNELQEKTGAQIQF 995
>gi|296088778|emb|CBI38228.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 42 VTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQ 101
+T +++ +P+ +G V G+ G+ + +L+ +GA+V + R SDR ++SG+PD+
Sbjct: 503 ITNTTVEIVIPENVIGSVYGENGNNLARLRKISGAKVTLHEPRPGT-SDRIVIISGTPDE 561
Query: 102 VQEARARIEELIDS 115
Q A++ ++ I +
Sbjct: 562 TQAAQSLLQAFIHT 575
>gi|167614344|gb|ABZ89744.1| IGF-II mRNA-binding protein 2a [Danio rerio]
Length = 607
Score = 45.4 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
EV+ + +P AVG +IGK G IK+L GA ++ D + R +++G P+ +
Sbjct: 435 EVVYLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAESPDVTQRMVIITGPPEAQFK 494
Query: 105 ARARI 109
A+ RI
Sbjct: 495 AQGRI 499
Score = 40.4 bits (93), Expect = 0.24, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM-LSGSPDQVQEARARI 109
VP +A G VIGKGG + +LQN T A V + + D +D + +SG Q A+ +I
Sbjct: 523 VPSSAAGRVIGKGGKTVNELQNLTSAEVIVPRDQTPDENDEVFVKISGHFFASQTAQRKI 582
Query: 110 EELIDSVMVEQ 120
E+I V ++
Sbjct: 583 REIIQQVKQQE 593
>gi|51472291|gb|AAU04539.1| neurological oncogenic ventral antigen protein [Danio rerio]
Length = 473
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 65 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNN 124
Query: 105 ARARIEELI 113
I E +
Sbjct: 125 VHDFIAEKV 133
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSP 99
+V+++ VP+ VG ++GKGG + + Q TGAR+Q + E P +R+ ++GSP
Sbjct: 417 DVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGSP 473
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
++ VP + G++IGKGG +K + ++GA VQ Q + + +R +SG P+Q ++A
Sbjct: 164 KLVVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGINLQERVVTISGEPEQNRKA 222
>gi|224136131|ref|XP_002327388.1| predicted protein [Populus trichocarpa]
gi|222835758|gb|EEE74193.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 6/75 (8%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQEARAR 108
VP VGV+IGKGGD I+ LQ +GA++Q + E D + R L GS + +A
Sbjct: 182 VPNDKVGVLIGKGGDTIRYLQYNSGAKIQITRDAEADLQSTTRPVELIGSLSSISKA--- 238
Query: 109 IEELIDSVMVEQFSG 123
E+LI++V+ E +G
Sbjct: 239 -EKLINAVIAEADAG 252
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 42/67 (62%), Gaps = 6/67 (8%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFV--QMREDDPSDRRCM-LSGSPDQV 102
++Q C+ VG++IG+GG+ IK LQ ++GAR+Q + + E D S R + ++G Q+
Sbjct: 290 LMQACI---QVGLIIGRGGETIKGLQAKSGARIQLIPQHLPEGDESKERTVRVTGDTRQI 346
Query: 103 QEARARI 109
+ AR I
Sbjct: 347 ETAREMI 353
>gi|149241962|pdb|2HH2|A Chain A, Solution Structure Of The Fourth Kh Domain Of Ksrp
Length = 107
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCMLSGSPDQVQEARAR 108
+P G+VIG+GG+ +K + +TGA V+ + DP+ + ++ GSP Q+ A+
Sbjct: 13 IPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRGSPQQIDHAKQL 72
Query: 109 IEELID 114
IEE I+
Sbjct: 73 IEEKIE 78
>gi|451856005|gb|EMD69296.1| hypothetical protein COCSADRAFT_78008 [Cochliobolus sativus ND90Pr]
Length = 574
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ VP AVG++IGKGG+ IK +Q+ETG ++ Q D +R L G+ + +A+
Sbjct: 424 IHVPSDAVGMIIGKGGETIKSMQSETGCKINVSQASGAD-IEREIGLVGTRQAIDDAKRA 482
Query: 109 IEELIDSV 116
I E +D V
Sbjct: 483 IWEKVDQV 490
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
Q+ VP VG++IG+GG+ I+ LQ +G V V + R L GSP A+
Sbjct: 312 QIMVPDRTVGLIIGRGGETIRDLQERSGCHVNIVGENKSVNGLRPVNLIGSPAAAAHAKE 371
Query: 108 RIEELIDS 115
I E++DS
Sbjct: 372 LIMEIVDS 379
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 21 DNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQF 80
D F +++ G R EVI + + VG+VIG+ G+ +++++ E+ R+QF
Sbjct: 189 DTFSPAQQY---GQARSPPANDNSEVI--LIDSSLVGLVIGRQGESLRRIEQESQTRIQF 243
Query: 81 VQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
+ E P R C ++GSP A+ I +I+
Sbjct: 244 INGPESGP-QRECRITGSPSARISAKREINRIIE 276
>gi|427785521|gb|JAA58212.1| Putative igf-ii mrna-binding protein imp [Rhipicephalus pulchellus]
Length = 657
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 42 VTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSD---RRCMLSGS 98
V E++ + +P AVG +IG GG I+ + +GA ++ Q +DDP+D R+ + G+
Sbjct: 441 VERELVCLYIPNTAVGAIIGTGGSSIRDMIMLSGASIKVAQPNKDDPADAHERKVTIVGT 500
Query: 99 PD 100
P+
Sbjct: 501 PE 502
>gi|195972875|ref|NP_001108030.2| insulin-like growth factor 2 mRNA-binding protein 2 [Danio rerio]
gi|124021198|gb|ABM88867.1| IGF2 mRNA-binding protein 2 [Danio rerio]
Length = 607
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
EV+ + +P AVG +IGK G IK+L GA ++ D + R +++G P+ +
Sbjct: 435 EVVYLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAESPDVTQRMVIITGPPEAQFK 494
Query: 105 ARARI 109
A+ RI
Sbjct: 495 AQGRI 499
Score = 40.4 bits (93), Expect = 0.25, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM-LSGSPDQVQEARARI 109
VP +A G VIGKGG + +LQN T A V + + D +D + +SG Q A+ +I
Sbjct: 523 VPSSAAGRVIGKGGKTVNELQNLTSAEVIVPRDQTPDENDEVFVKISGHFFASQTAQRKI 582
Query: 110 EELIDSVMVEQ 120
E+I V ++
Sbjct: 583 REIIQQVKQQE 593
>gi|7245806|pdb|1DT4|A Chain A, Crystal Structure Of Nova-1 Kh3 K-Homology Rna-Binding
Domain
Length = 73
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
+V+++ VP+ VG ++GKGG + + Q TG R+Q + E P +R+ ++G+P
Sbjct: 3 DVVEIAVPENLVGAILGKGGKTLVEYQELTGCRIQISKKGEFLPGTRNRKVTITGTPAAT 62
Query: 103 QEARARIEELI 113
Q A+ I + I
Sbjct: 63 QAAQYLITQRI 73
>gi|303282355|ref|XP_003060469.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457940|gb|EEH55238.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 552
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 55/108 (50%), Gaps = 15/108 (13%)
Query: 18 RNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGAR 77
RN D G+ + G G W E I C AVG VIGK G + ++++ETGA+
Sbjct: 335 RNFDYDGDWGDERLGGSRDRGEW---IEEIIPCRSALAVGRVIGKRGTTVSRIESETGAK 391
Query: 78 VQFVQ-MREDDPSDRRCMLSGSPDQVQEARARIEELIDSVMVEQFSGA 124
+Q Q M E C++SG P+ V A ++++ VMVE F GA
Sbjct: 392 IQVDQRMLE-------CVVSGYPEAVAAASRQVKQ----VMVEGFGGA 428
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 9/74 (12%)
Query: 57 GVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELI--- 113
G VIGK G + ++Q+ETGAR++ D +C +SG+ +QV A + +I
Sbjct: 271 GRVIGKRGATVMRIQDETGARIEV------KAEDGQCFVSGTREQVDRATVAVRRIIEEG 324
Query: 114 DSVMVEQFSGANFD 127
D Q + NFD
Sbjct: 325 DGYEPVQRASRNFD 338
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 57 GVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELI 113
G++IG GG +++++ E+ ARV ++ E C++ G PD V+ A + EL+
Sbjct: 439 GLIIGPGGARVRRIRTESKARVDVQKISEHASE---CVIKGDPDAVRIAVGMVTELM 492
Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%), Gaps = 6/41 (14%)
Query: 57 GVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSG 97
G VIGKGG I ++QNETGAR+ ++ E+ C ++G
Sbjct: 182 GRVIGKGGATIDRIQNETGARIDVLRDEEE------CRITG 216
>gi|341038388|gb|EGS23380.1| hypothetical protein CTHT_0000680 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 553
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Query: 20 NDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQ 79
N N N R + G G +V + VP AVG++IGKGG+ I+++QN TG ++
Sbjct: 367 NGNLPNPRGGRNDNFGGNGQEKVNDSIF---VPSDAVGMIIGKGGETIREMQNMTGCKIN 423
Query: 80 FVQMREDDPSDRRCMLSGSPDQVQEARARIEELIDSVMVEQFSG 123
Q +R L G+ + + A+ IE+ ++ V + SG
Sbjct: 424 VSQPSGPGEVEREIGLVGTREAIARAKRAIEDKVEVVRQKSGSG 467
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
+ +Q+ VP VG++IG+GG+ I+ LQ +G + V + R L G P +
Sbjct: 293 DTVQIMVPDRTVGLIIGRGGETIRDLQERSGCHINIVGENKSVNGLRPVNLIGPPAATRI 352
Query: 105 ARARIEELIDS 115
A+ I E++DS
Sbjct: 353 AKELILEIVDS 363
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
EVI++ + VG++IG+ G+ +++++ ET RVQF+ + + R C + G Q +E
Sbjct: 200 EVIEIEA--SLVGLIIGRQGENLRRVEGETRCRVQFIPPQGPNDQMRLCKIQGPRPQREE 257
Query: 105 ARARIEELI-DSVM 117
A+ I +I DS M
Sbjct: 258 AKEMINRIIRDSGM 271
>gi|198429828|ref|XP_002122756.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 53
[Ciona intestinalis]
Length = 525
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 63/118 (53%), Gaps = 10/118 (8%)
Query: 4 IEFQQSRRWQQ-GIGRN---NDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVV 59
++ QSR + GRN N N N R+ N + D GG + + + V G +
Sbjct: 18 FDYSQSRVPNKVNFGRNQRRNYNRYNDRQ-NNDKDFAGGSDNLFDDATTITVDSRDCGKI 76
Query: 60 IGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELIDSVM 117
IGKGG +I++L+ ++GAR++ Q R+ +D ++SGS Q+AR E+I+ +M
Sbjct: 77 IGKGGSVIRELEQKSGARIKVCQ-RDRSETDVPVVISGS----QDARNAAHEMINDLM 129
>gi|344275406|ref|XP_003409503.1| PREDICTED: tudor and KH domain-containing protein isoform 1
[Loxodonta africana]
Length = 560
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+++ +P+ +V ++IG+ G IK+L+ +TGAR+ ED +R ++SG P QV +A+
Sbjct: 55 VEMRIPQESVKLIIGRQGANIKQLRKQTGARIDVDT--EDVGDERVLLISGFPVQVCKAK 112
Query: 107 ARIEELI--DSVMVEQFS 122
A I +++ ++ + EQ S
Sbjct: 113 AAIHQMLTENTPVSEQLS 130
>gi|443703967|gb|ELU01260.1| hypothetical protein CAPTEDRAFT_119585, partial [Capitella teleta]
Length = 353
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 43 TWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDR--RCMLSGSPD 100
T +++ VP VIGKGG+ IK++ +TG + F ++ +++ + ++G P
Sbjct: 66 TRVTLKLDVPHTEHSHVIGKGGNNIKRVMQDTGCHIHFPDSNRNNQAEKSNQVSIAGQPS 125
Query: 101 QVQEARARIEELIDSVMV 118
V+EAR++I EL+ V +
Sbjct: 126 GVEEARSKIRELLPLVFM 143
>gi|327275209|ref|XP_003222366.1| PREDICTED: poly(rC)-binding protein 3-like [Anolis carolinensis]
Length = 461
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 38/63 (60%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+++ +P + G +IGKGG IK+++ TGA+VQ + ++R +SG+PD + +
Sbjct: 103 LRLVIPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCV 162
Query: 107 ARI 109
+I
Sbjct: 163 KQI 165
Score = 35.4 bits (80), Expect = 8.1, Method: Composition-based stats.
Identities = 16/71 (22%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
++ +P +G +IG+ G I +++ +GA+++ E ++R+ ++GSP + A+
Sbjct: 286 ELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANATEGS-AERQVTITGSPANISLAQY 344
Query: 108 RIEELIDSVMV 118
I ++ V
Sbjct: 345 LINASLEMAKV 355
>gi|270009742|gb|EFA06190.1| hypothetical protein TcasGA2_TC009039 [Tribolium castaneum]
Length = 808
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG + LQ E+GA++ + E D + R LSG+ D V +A + I
Sbjct: 64 VPSKFVGKIIGRGGSKVNDLQFESGAKINITKETEGDETFIR--LSGTNDAVSKAESLIR 121
Query: 111 EL 112
EL
Sbjct: 122 EL 123
>gi|380012793|ref|XP_003690459.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Apis
florea]
Length = 443
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 34/110 (30%), Positives = 54/110 (49%), Gaps = 9/110 (8%)
Query: 16 IGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETG 75
IG+ N +R ++NG R G E+ +++ V ++ G +IGKGG IK+L+ +TG
Sbjct: 97 IGKGGQNITKLR--SQNGS-RHGSDEID---VRMLVHQSQAGCIIGKGGLKIKELREKTG 150
Query: 76 ARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELIDSVMVEQFSGAN 125
AR++ +DR + G P E I ELI ++ G N
Sbjct: 151 ARIKIYSHCCPHSTDRLISICGKPTTCIEC---IRELIATIKTSPLKGVN 197
Score = 43.9 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 9/70 (12%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP----SDRRCMLSGSPDQVQ 103
QV +PK G +IGKGG I+K+++++GA + D+P +DR ++G P Q+Q
Sbjct: 372 QVTIPKDLAGAIIGKGGARIRKVRSDSGAGITI-----DEPLSGSNDRIITITGLPSQIQ 426
Query: 104 EARARIEELI 113
A+ +++ +
Sbjct: 427 MAQYLLQQSV 436
>gi|238836388|gb|ACR61402.1| IGF-II mRNA-binding protein 2a variant C [Danio rerio]
Length = 453
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
EV+ + +P AVG +IGK G IK+L GA ++ D + R +++G P+ +
Sbjct: 281 EVVYLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAESPDVTQRMVIITGPPEAQFK 340
Query: 105 ARARI 109
A+ RI
Sbjct: 341 AQGRI 345
Score = 40.0 bits (92), Expect = 0.29, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM-LSGSPDQVQEARARI 109
VP +A G VIGKGG + +LQN T A V + + D +D + +SG Q A+ +I
Sbjct: 369 VPSSAAGRVIGKGGKTVNELQNLTSAEVIVPRDQTPDENDEVFVKISGHFFASQTAQRKI 428
Query: 110 EELIDSVMVEQ 120
E+I V ++
Sbjct: 429 REIIQQVKQQE 439
>gi|157427876|ref|NP_001098845.1| tudor and KH domain-containing protein [Bos taurus]
gi|148744218|gb|AAI42177.1| TDRKH protein [Bos taurus]
gi|296489558|tpg|DAA31671.1| TPA: tudor and KH domain containing [Bos taurus]
Length = 296
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I++ VP+ AV ++IG+ G IK+L+ +TGAR+ ED +R ++SG P QV +A+
Sbjct: 55 IEMRVPQEAVKLIIGRQGANIKQLRKKTGARIDVDT--EDIGDERVLLISGFPVQVCKAK 112
Query: 107 ARIEELI--DSVMVEQFS 122
A I +++ ++ + EQ S
Sbjct: 113 AAIHQILTENTPVSEQLS 130
>gi|396578132|ref|NP_001257527.1| insulin-like growth factor 2 mRNA-binding protein 2 isoform 1
[Rattus norvegicus]
gi|149019899|gb|EDL78047.1| similar to IGF-II mRNA-binding protein 2 (predicted) [Rattus
norvegicus]
Length = 592
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E + + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 421 ETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 480
Query: 105 ARARI 109
A+ RI
Sbjct: 481 AQGRI 485
>gi|169608844|ref|XP_001797841.1| hypothetical protein SNOG_07507 [Phaeosphaeria nodorum SN15]
gi|160701727|gb|EAT84973.2| hypothetical protein SNOG_07507 [Phaeosphaeria nodorum SN15]
Length = 561
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
Q+ VP VG++IG+GG+ I+ LQ +G V V + R L GSP A+
Sbjct: 298 QIMVPDRTVGLIIGRGGETIRDLQERSGCHVNIVGENKSVNGLRPVNLIGSPAAAAHAKE 357
Query: 108 RIEELIDS 115
I E++DS
Sbjct: 358 LIMEIVDS 365
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ + + VG+VIG+ G+ +++++ E+ R+QF+ E P R+C ++G P A+
Sbjct: 198 ILIDSSLVGLVIGRQGESLRRIEQESNTRIQFINGPEAGP-QRQCRITGQPSARISAKRE 256
Query: 109 IEELID 114
I +I+
Sbjct: 257 INRIIE 262
>gi|255585533|ref|XP_002533457.1| conserved hypothetical protein [Ricinus communis]
gi|223526690|gb|EEF28926.1| conserved hypothetical protein [Ricinus communis]
Length = 295
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEA 105
++ V + G +IGKGG K++ +TGA++ ++ E DP+ R GS +Q+++A
Sbjct: 170 TAKISVEASLAGAIIGKGGVNSKQICRQTGAKLS-IREHETDPNLRNIEFEGSFEQIKQA 228
Query: 106 RARIEELIDSV 116
A + ELI S+
Sbjct: 229 SAMVSELIASI 239
>gi|355567865|gb|EHH24206.1| hypothetical protein EGK_07823 [Macaca mulatta]
Length = 464
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 11/78 (14%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP---- 88
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ D+P
Sbjct: 376 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-----DEPLEGF 430
Query: 89 SDRRCMLSGSPDQVQEAR 106
D+ ++G+ DQ+Q A+
Sbjct: 431 KDQIITITGTQDQIQNAQ 448
>gi|323450160|gb|EGB06043.1| hypothetical protein AURANDRAFT_65961 [Aureococcus anophagefferens]
Length = 502
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 10/71 (14%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRC-----MLSGSPDQV 102
++ VP+ AVG VIGK G I+ ++ +GARV R DD DR +++G+PDQ
Sbjct: 274 RLVVPRQAVGRVIGKRGATIQGIERNSGARV-----RVDDGGDRSSDIAGILIAGAPDQR 328
Query: 103 QEARARIEELI 113
+A I +++
Sbjct: 329 AQAVEAITDIV 339
>gi|410922719|ref|XP_003974830.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Takifugu
rubripes]
Length = 434
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 3/78 (3%)
Query: 30 NENGDGRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD 87
N + GR ++ V+ QV +PK G +IGKGG IK++++++GA ++ + E
Sbjct: 342 NYHSGGRCSYNDIGGPVVTTQVTIPKDLAGSIIGKGGQRIKQIRHDSGAAIKIDEPLEGS 401
Query: 88 PSDRRCMLSGSPDQVQEA 105
DR ++G+ DQ+Q A
Sbjct: 402 -EDRIITITGTQDQIQNA 418
>gi|395752934|ref|XP_002830848.2| PREDICTED: poly(rC)-binding protein 3 [Pongo abelii]
Length = 432
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+++ VP + G +IGKGG IK+++ TGA+VQ + ++R +SG+PD + +
Sbjct: 130 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCV 189
Query: 107 ARI 109
+I
Sbjct: 190 KQI 192
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 18/81 (22%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPD 100
E+ WEV G +IGK G+ +KK++ E+GAR + + E + +R ++G D
Sbjct: 50 ELLWEV----------GSIIGKKGETVKKMREESGAR---INISEGNCPERIVTITGPTD 96
Query: 101 QVQEARARI-----EELIDSV 116
+ +A A I E++I+S+
Sbjct: 97 AIFKAFAMIAYKFEEDIINSM 117
>gi|410931620|ref|XP_003979193.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Takifugu rubripes]
Length = 211
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E + V +P AVG +IGK G IK+L GA ++ D R +++G P+ +
Sbjct: 23 ETVHVYIPAQAVGAIIGKKGQHIKQLSRFAGASIKIAPAESPDSKMRMVIVTGPPEAQFK 82
Query: 105 ARARI 109
A+ RI
Sbjct: 83 AQGRI 87
>gi|307107596|gb|EFN55838.1| hypothetical protein CHLNCDRAFT_52074 [Chlorella variabilis]
Length = 363
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 52 PKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEE 111
PK VG +IG+ GD IK+LQ TGA +Q Q DP R L+G P +A+ IE+
Sbjct: 168 PKGIVGRIIGRQGDTIKQLQRVTGATIQIDQ--STDPC--RVTLAGQPSSSDQAKRMIED 223
Query: 112 LI 113
+I
Sbjct: 224 II 225
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 52 PKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSDRRCMLSGSPDQVQEARARIE 110
P VG +IG+GG+ I+ LQ+ + A + Q E P R+ ++ G PD Q+A I
Sbjct: 79 PAGIVGRIIGRGGETIRALQSASQAHITVDQNFPEGQP--RKIIVQGRPDACQKASMMIR 136
Query: 111 ELID 114
ELI+
Sbjct: 137 ELIN 140
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSG-SPDQVQEARARI 109
+P A VG +IGK G+ I+ LQ T R+Q E D +R +SG S + V RA I
Sbjct: 6 IPSAMVGKLIGKAGETIRNLQLSTDTRIQVDHAAEGD--TKRVTISGMSAEAVARCRAEI 63
Query: 110 EELI 113
++
Sbjct: 64 ATIL 67
>gi|238878419|gb|EEQ42057.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 1220
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
+V+Q+ P A+ VIGK G+ I + + TG F + E+ L+GS ++E
Sbjct: 810 QVVQI--PLKAIARVIGKAGETINDIADGTGVEYTFNRDSEETKGHSEVELTGSKSALKE 867
Query: 105 ARARIEELIDSV 116
A A+I+E+ID V
Sbjct: 868 AVAKIQEIIDEV 879
Score = 35.8 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 38/67 (56%), Gaps = 7/67 (10%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM--LSGSPDQVQEA 105
++ +PK ++IG G + LQ+E G ++ + P+D + ++G PD++ A
Sbjct: 968 EIDLPKEKHRLIIGPNGTIRHSLQSEFGVTIEIPR-----PNDESTVVKITGLPDKIDSA 1022
Query: 106 RARIEEL 112
+A+IEEL
Sbjct: 1023 KAKIEEL 1029
>gi|341903406|gb|EGT59341.1| hypothetical protein CAEBREN_22676 [Caenorhabditis brenneri]
Length = 925
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 39/70 (55%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I + +P G +IGKGG+ +KKL+N + + +Q SD+ ++G P V++AR
Sbjct: 222 IDIPIPANKCGSIIGKGGETMKKLRNLSKCYITLIQENNLADSDKPLRITGDPKCVEQAR 281
Query: 107 ARIEELIDSV 116
+ E + +V
Sbjct: 282 RLVAEFLVNV 291
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 36/56 (64%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+P G+V+G+GG+ IK++ +TGA + + DD +++ ++ G+ DQ++ A+
Sbjct: 399 IPAHKCGLVVGRGGETIKQINIDTGAYCELSRETADDTTEKTFVIRGTEDQIEHAK 454
Score = 43.5 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 33 GDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
+G GG + V VP+ +VG ++G G IKKL +E+G ++QF+ + + R
Sbjct: 302 ANGSGGQ-----TTLHVHVPRTSVGAIMGHKGCNIKKLSDESGTKIQFLNDSDPNMMTRS 356
Query: 93 CMLSGSPDQVQEARARIEELID 114
+ G+ +VQ A I+ +++
Sbjct: 357 LAIIGTSTRVQIASQLIKAIVE 378
Score = 40.0 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
+P+ VG+VIG+ G I + ++G RVQ +P + + G P+++Q A +
Sbjct: 140 IPENCVGLVIGRNGTEINSISQKSGCRVQVNVNETSNPGFKMVEIFGPPEKIQHAIELVN 199
Query: 111 ELIDSVMVEQ 120
E++ + Q
Sbjct: 200 EVVSRSVNRQ 209
>gi|256079872|ref|XP_002576208.1| rna-binding protein related [Schistosoma mansoni]
gi|353231011|emb|CCD77429.1| rna-binding protein related [Schistosoma mansoni]
Length = 666
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQEA 105
++ VP A G +IGKGG+ I ++QN+T A+V+ + P ++R C++ G+ + +
Sbjct: 46 KILVPSIAAGAIIGKGGEAITEIQNQTSAKVKMSKANAFYPGTTERVCLIVGTIESILRV 105
Query: 106 RARIEELI 113
I E I
Sbjct: 106 FQYISEKI 113
Score = 44.7 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM-LSGSPDQVQEA 105
+++ VP + G++IGKGG IK+L++ TG +Q Q ++ RC+ ++G Q ++A
Sbjct: 137 VKILVPNSTAGMIIGKGGSFIKELKDTTGVFIQVSQKSKELNLAERCVTVAGELSQTRDA 196
Query: 106 RARI 109
A I
Sbjct: 197 IALI 200
>gi|452003509|gb|EMD95966.1| hypothetical protein COCHEDRAFT_1127269 [Cochliobolus
heterostrophus C5]
Length = 574
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
Q+ VP VG++IG+GG+ I+ LQ +G V V + R L GSP A+
Sbjct: 312 QIMVPDRTVGLIIGRGGETIRDLQERSGCHVNIVGENKSVNGLRPVNLIGSPAAAAHAKE 371
Query: 108 RIEELIDS 115
I E++DS
Sbjct: 372 LIMEIVDS 379
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
+ VP AVG++IGKGG+ IK +Q+ETG ++ Q D +R L G+ + +A+
Sbjct: 424 IHVPSDAVGMIIGKGGETIKSMQSETGCKINVSQASGAD-IEREIGLVGTRQAIDDAKRA 482
Query: 109 IEELIDSV 116
I E ++ V
Sbjct: 483 IWEKVEQV 490
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 21 DNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQF 80
D F +++ G R EVI + + VG+VIG+ G+ +++++ E+ R+QF
Sbjct: 189 DTFSPAQQY---GQARSPPANDNSEVI--LIDSSLVGLVIGRQGESLRRIEQESQTRIQF 243
Query: 81 VQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
+ E P R C ++GSP A+ I +I+
Sbjct: 244 INGPESGP-QRECRITGSPGARISAKREINRIIE 276
>gi|357603478|gb|EHJ63796.1| Heterogeneous nuclear ribonucleoprotein K [Danaus plexippus]
Length = 264
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
QV +PK G +IGK G I+K++ E+GA ++ + +DR ++G+P ++Q+A+
Sbjct: 188 QVTIPKDLAGAIIGKAGSRIRKIRAESGAGIEIAEPLPGA-ADRIITITGTPPRIQKAQY 246
Query: 108 RIEELI 113
+++ +
Sbjct: 247 LLQQSV 252
>gi|410911650|ref|XP_003969303.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Takifugu rubripes]
Length = 581
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 35/65 (53%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E + + +P AVG +IGK G IK+L + GA ++ DP R ++ G P+ +
Sbjct: 407 ETVHLFIPTLAVGAIIGKQGQHIKQLSHFAGASIKIAPAEGMDPKHRMVIIVGPPEAQFK 466
Query: 105 ARARI 109
A+ RI
Sbjct: 467 AQCRI 471
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Query: 23 FGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ 82
FG ++E N G EV E + VP A G VIGKGG + +LQN T A V +
Sbjct: 472 FGKLKEENFFGPKE----EVKLEA-HIKVPSFAAGRVIGKGGKTVNELQNLTCAEVVVPR 526
Query: 83 MREDDPSDRRCM-LSGSPDQVQEARARIEELIDSVMVEQ 120
+ D D+ + + G Q A+ +I+E++ V +Q
Sbjct: 527 DQTPDEKDQVIVKIIGHFFACQLAQRKIQEILAQVRRQQ 565
Score = 35.0 bits (79), Expect = 8.7, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 47/103 (45%), Gaps = 7/103 (6%)
Query: 24 GNMREFNENGDGR------GGMWEVTWEV-IQVCVPKAAVGVVIGKGGDMIKKLQNETGA 76
G R FN G R G +V ++ +++ VP VG +IGK GD I+ L +T +
Sbjct: 167 GGRRSFNARGPPRSGSPSLGARPKVQSDIPLRMLVPTQFVGAIIGKQGDTIRNLTKQTHS 226
Query: 77 RVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELIDSVMVE 119
++ + +++ + +P+ A I E++ ++
Sbjct: 227 KIDIHRKENAGAAEKPITIHSTPEGSSNACRTIMEIMQKEAID 269
>gi|225464083|ref|XP_002269250.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 648
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Query: 42 VTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQ 101
+T +++ +P+ +G V G+ G+ + +L+ +GA+V + R SDR ++SG+PD+
Sbjct: 566 ITNTTVEIVIPENVIGSVYGENGNNLARLRKISGAKVTLHEPRPGT-SDRIVIISGTPDE 624
Query: 102 VQEARARIEELIDS 115
Q A++ ++ I +
Sbjct: 625 TQAAQSLLQAFIHT 638
Score = 39.7 bits (91), Expect = 0.39, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 24/81 (29%)
Query: 56 VGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS---------------DRRCMLSGSPD 100
+G VIGK G ++K+LQ++TGAR++ ED PS +RR L GS +
Sbjct: 62 IGGVIGKSGVIVKQLQSDTGARIRV----EDSPSTSDHRVILVIAPASVNRRIALQGSSE 117
Query: 101 QV-----QEARARIEELIDSV 116
+V QEA R+ E I V
Sbjct: 118 EVEASAAQEAVLRVFERILEV 138
>gi|432891068|ref|XP_004075532.1| PREDICTED: RNA-binding protein Nova-1-like [Oryzias latipes]
Length = 220
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGS 98
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+
Sbjct: 104 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGT 157
>gi|396578134|ref|NP_001257528.1| insulin-like growth factor 2 mRNA-binding protein 2 isoform 2
[Rattus norvegicus]
Length = 524
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E + + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 353 ETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 412
Query: 105 ARARI 109
A+ RI
Sbjct: 413 AQGRI 417
>gi|408389894|gb|EKJ69314.1| hypothetical protein FPSE_10478 [Fusarium pseudograminearum CS3096]
Length = 1270
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 43 TWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSD 90
T I+V +P + +IGKGG MIK LQ +TGA++Q ++ E++P D
Sbjct: 198 TRTAIKVPIPHSTRAHIIGKGGSMIKALQEKTGAKIQLPKVDENNPID 245
Score = 36.2 bits (82), Expect = 4.8, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARAR 108
V V + VG +IG+GG + +L+ TGAR+ Q R+ + + + G+ QV +A+
Sbjct: 863 VSVKQKQVGSLIGQGGAALDELRQATGARIDVPQDRDTEIVE--IQIKGTASQVAKAKKV 920
Query: 109 IEE 111
+EE
Sbjct: 921 LEE 923
>gi|422294868|gb|EKU22168.1| rna binding protein [Nannochloropsis gaditana CCMP526]
gi|422295339|gb|EKU22638.1| rna binding protein [Nannochloropsis gaditana CCMP526]
Length = 123
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 28 EFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD 87
E ENG G ++V+ V VP AV +IGK G + ++ ++GA+V+F +
Sbjct: 34 EVTENGRG-------AYQVVHVLVPNKAVSFLIGKAGINVIAIEKKSGAKVEFTREASPP 86
Query: 88 PSDRRCMLSGSPDQVQEARARIE 110
++R + G+ V+ A A +E
Sbjct: 87 AAERLVNIKGNAKAVKIAEALLE 109
>gi|354484184|ref|XP_003504270.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 1 [Cricetulus griseus]
gi|344239809|gb|EGV95912.1| Insulin-like growth factor 2 mRNA-binding protein 2 [Cricetulus
griseus]
Length = 530
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E + + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 359 ETVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 418
Query: 105 ARARI 109
A+ RI
Sbjct: 419 AQGRI 423
>gi|145207996|ref|NP_898850.2| insulin-like growth factor 2 mRNA-binding protein 2 [Mus musculus]
gi|81889459|sp|Q5SF07.1|IF2B2_MOUSE RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 2;
Short=IGF2 mRNA-binding protein 2; Short=IMP-2; AltName:
Full=IGF-II mRNA-binding protein 2; AltName: Full=VICKZ
family member 2
gi|46577878|gb|AAT01428.1| insulin-like growth factor 2 mRNA-binding protein 2 [Mus musculus]
Length = 592
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E + + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 421 ETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 480
Query: 105 ARARI 109
A+ RI
Sbjct: 481 AQGRI 485
>gi|193203009|ref|NP_491627.2| Protein M01A10.1 [Caenorhabditis elegans]
gi|373220094|emb|CCD72087.1| Protein M01A10.1 [Caenorhabditis elegans]
Length = 586
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
Query: 35 GRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRR 92
G G V +QV VP++ VG ++G G IKK+ NET ++QF M +DDP +R
Sbjct: 227 GMAGNSPVAAMSLQVKVPRSTVGAIMGLQGSNIKKISNETETKIQF--MPDDDPKLMERT 284
Query: 93 CMLSGSPDQVQEARARIEELIDS 115
++ G+ ++V +++++++
Sbjct: 285 LVVIGNKNKVYVCARLLQKIVEA 307
Score = 38.5 bits (88), Expect = 0.79, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSD--RRCMLSGSPDQVQE 104
I + +P G +IGK G+ ++KL++ T F+ ++E++ +D + ++G P +V+
Sbjct: 151 IIIPIPANKCGAIIGKKGEQMRKLRSWTNC--DFILIQENNIADSVKPLQITGQPKEVEH 208
Query: 105 ARARIEELID 114
A+A + +++D
Sbjct: 209 AKALVADILD 218
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 38/63 (60%), Gaps = 8/63 (12%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS----DRRCMLSGSPDQVQEAR 106
+P + G+VIG+GG+ I+++ E+GA + + DPS +++ ++ GS QV+ A+
Sbjct: 323 IPASKCGLVIGRGGETIRQINKESGAYCEMSR----DPSISAIEKQFVIRGSETQVEHAK 378
Query: 107 ARI 109
I
Sbjct: 379 HLI 381
Score = 35.4 bits (80), Expect = 7.4, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 49 VCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSD---RRCMLSGSPDQVQEA 105
V +P+ +VG+VIG+ G I+ + ++G RVQ V +PS R + G + ++ A
Sbjct: 56 VSIPEESVGLVIGRNGVEIQAISQKSGCRVQIVA----EPSTTGYRSVDIYGISENIEVA 111
Query: 106 RARIEELI 113
+ I E++
Sbjct: 112 KKLINEVV 119
>gi|148665204|gb|EDK97620.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_a
[Mus musculus]
Length = 596
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E + + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 425 ETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 484
Query: 105 ARARI 109
A+ RI
Sbjct: 485 AQGRI 489
>gi|148665207|gb|EDK97623.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_d
[Mus musculus]
Length = 603
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E + + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 432 ETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 491
Query: 105 ARARI 109
A+ RI
Sbjct: 492 AQGRI 496
>gi|148665206|gb|EDK97622.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_c
[Mus musculus]
Length = 543
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E + + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 372 ETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 431
Query: 105 ARARI 109
A+ RI
Sbjct: 432 AQGRI 436
>gi|395856110|ref|XP_003804056.1| PREDICTED: LOW QUALITY PROTEIN: tudor and KH domain-containing
protein [Otolemur garnettii]
Length = 593
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I++ VP+ AV +IG+ G IK+L+ +TGAR+ E+ +R ++SG P QV +A+
Sbjct: 55 IEMRVPQEAVKFIIGQQGANIKQLRKQTGARIDVDT--ENVGDERVLLISGFPVQVCKAK 112
Query: 107 ARIEELI--DSVMVEQFS 122
A I +++ ++ + EQ S
Sbjct: 113 AAIHQILIENTPVSEQLS 130
Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD-PSDRRCMLSGSPDQVQEAR 106
Q+ VP+ +VG +IG+GG+ I+ + +GA++ + E RR +SG+ +V A+
Sbjct: 128 QLSVPQRSVGRIIGRGGETIRSICKASGAKITCDKESEGTLLLSRRIKISGTQKEVAAAK 187
Query: 107 ARIEELI 113
I E +
Sbjct: 188 HLILEKV 194
>gi|395536709|ref|XP_003770354.1| PREDICTED: uncharacterized protein LOC100914843 [Sarcophilus
harrisii]
Length = 1087
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
EV+ + +P AVG +IGK G IK+L GA ++ + S+R +++G P+ +
Sbjct: 911 EVVYLFIPTQAVGAIIGKKGHHIKQLARFAGASIKIAPPEGPEASERMVIITGPPEAQFK 970
Query: 105 ARARI 109
A+ RI
Sbjct: 971 AQGRI 975
Score = 36.6 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 34/67 (50%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+++ VP VG +IGK G IK L +T ++V + S++ + SP+ EA
Sbjct: 535 LRILVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGASEKPVTIHASPEGASEAC 594
Query: 107 ARIEELI 113
I E++
Sbjct: 595 RMILEIM 601
>gi|361126278|gb|EHK98287.1| putative Far upstream element-binding protein 2 [Glarea lozoyensis
74030]
Length = 499
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 40/59 (67%)
Query: 56 VGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
VG++IG+ G+ ++++++ETG RVQF+ ++ R+C ++G + +A+A I +ID
Sbjct: 192 VGLIIGRQGENLRRVESETGCRVQFITGHDEQGPFRQCKITGPRARRADAKAEINRIID 250
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+Q+ VP VG++IG+GG+ I+ LQ +G V V ++ R L GS + A+
Sbjct: 294 MQIMVPDRTVGLIIGRGGETIRDLQERSGCHVNIVGEQKSVNGLRPVNLIGSREAAAHAK 353
Query: 107 ARIEELIDS 115
I E+++S
Sbjct: 354 DLIMEIVES 362
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGS 98
+V VP AVG++IGK G+ IK++QN TG ++ + R L GS
Sbjct: 402 KVYVPSEAVGMIIGKRGETIKEMQNTTGCKINVTPSSGSSETQREIGLVGS 452
>gi|307105952|gb|EFN54199.1| hypothetical protein CHLNCDRAFT_31755 [Chlorella variabilis]
Length = 282
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
+ + VP+ VGVVIGK G +I +++ G ++ + E P DR C ++G+P+ V+
Sbjct: 208 VTIAVPEDKVGVVIGKQGAVINQIKELLGVSIRISKKGEFLPGSHDRACSITGTPEAVEI 267
Query: 105 ARARIEELIDSVMV 118
A+ I++ ID+ V
Sbjct: 268 AQRLIQQKIDAANV 281
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 29 FNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP 88
E G GG E V++ VP A G +IGK G I ++Q ++ AR+Q + E P
Sbjct: 34 LEETGSDAGGSRE-ERVVVKFLVPNVAAGSIIGKSGANITEIQTQSNARMQLSRANEFYP 92
Query: 89 S-----DRRCMLSGSPDQVQEA 105
DR ++SG+ +Q+ A
Sbjct: 93 GSPEGQDRILLVSGTVNQLLTA 114
>gi|378726019|gb|EHY52478.1| hypothetical protein HMPREF1120_00690 [Exophiala dermatitidis
NIH/UT8656]
Length = 365
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 21/105 (20%)
Query: 15 GIGRNNDNFGNMREFNENGDG----------------RGGMWEVT--WEVIQ---VCVPK 53
G+ N+ G R +N G+G RGG+ VT E +Q + +P
Sbjct: 233 GLPAGNNYIGGGRSYNRTGNGADFSESRGYTRGNDLPRGGIPMVTEDGEEVQTQNISIPA 292
Query: 54 AAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGS 98
VG +IG+GG I +++ +GAR+ + DD +R + GS
Sbjct: 293 DMVGCIIGRGGSKISEIRKTSGARISIAKAPHDDTGERMFTIMGS 337
>gi|74215286|dbj|BAE41861.1| unnamed protein product [Mus musculus]
Length = 530
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E + + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 359 ETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 418
Query: 105 ARARI 109
A+ RI
Sbjct: 419 AQGRI 423
>gi|332375779|gb|AEE63030.1| unknown [Dendroctonus ponderosae]
Length = 463
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
+ +++ +PKA V +IG+ G IK+ Q ++ R+ F ++D D C++ G+ D
Sbjct: 47 KTMEITIPKAVVRSLIGRNGSNIKRFQEQSNTRINF--RSQEDKQDTICVIRGTVDACDI 104
Query: 105 ARARIEELIDS 115
A + I+E I++
Sbjct: 105 AYSLIQEFINN 115
Score = 38.5 bits (88), Expect = 0.85, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
+P A V +IG+GG+ I ++ +GA+V V+ + S R L G+ +Q+ A++ I
Sbjct: 126 IPAAFVKNIIGRGGEKISEINTVSGAKVN-VRNEQRGLSSARLQLVGTCEQINVAKSLIG 184
Query: 111 ELIDSVMVEQFS 122
E+++ +E+ S
Sbjct: 185 EIVEQCNLEKES 196
>gi|413943642|gb|AFW76291.1| hypothetical protein ZEAMMB73_850778 [Zea mays]
Length = 234
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEA 105
++ V + G +IGKGG K + TGA++ ++ E DP+ + L G+ DQ++ A
Sbjct: 104 TAKISVDASLAGAIIGKGGTNTKHISRVTGAKLA-IRDNEADPNHKNIELEGTFDQIKHA 162
Query: 106 RARIEELI 113
A + ELI
Sbjct: 163 SAMVTELI 170
>gi|410897014|ref|XP_003961994.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Takifugu rubripes]
Length = 607
Score = 44.7 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 38/65 (58%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
EV + +P AVG +IGK G IK+L + GA ++ D ++R +++G+P+ +
Sbjct: 434 EVAYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKVAPAEMPDATERMVIITGTPEAQFK 493
Query: 105 ARARI 109
A+ RI
Sbjct: 494 AQGRI 498
Score = 36.2 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 48/101 (47%), Gaps = 10/101 (9%)
Query: 23 FGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ 82
FG ++E N G EV E + VP A G VIGKGG + +LQ+ T A V +
Sbjct: 499 FGKLKEENI----FTGKEEVRLET-HIKVPSTAAGRVIGKGGKTVNELQSLTSAEV--IV 551
Query: 83 MREDDPSDRR---CMLSGSPDQVQEARARIEELIDSVMVEQ 120
R+ P ++ + G Q A+ +I E+I V ++
Sbjct: 552 PRDQTPDEKNEVVVKICGHFFANQTAQRKIREIIQQVKQQE 592
>gi|312079807|ref|XP_003142332.1| hypothetical protein LOAG_06748 [Loa loa]
gi|307762504|gb|EFO21738.1| hypothetical protein LOAG_06748 [Loa loa]
Length = 342
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 44 WEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQ 103
+ QV +P G +IGKGG I +++ E+GA+++ V+ D+ DR +SG+ +Q+Q
Sbjct: 261 MQTTQVTIPDELGGAIIGKGGSRINRVREESGAQIE-VEPHRDNGGDRIITISGTREQIQ 319
Query: 104 EARARIEELI 113
A+ +++ +
Sbjct: 320 AAQYLLQQCV 329
Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 38/67 (56%)
Query: 31 ENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSD 90
++ D RG + ++V V ++ G VIG+GG IK+L+ +TGA+++ ++
Sbjct: 101 DDHDRRGKKADRPDSEMKVLVHESHAGAVIGRGGSRIKELREKTGAQLKVFSRCAPQSTE 160
Query: 91 RRCMLSG 97
R +L+G
Sbjct: 161 RIVLLNG 167
>gi|72388474|ref|XP_844661.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62360138|gb|AAX80558.1| hypothetical protein, conserved [Trypanosoma brucei]
gi|70801194|gb|AAZ11102.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 265
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 12/93 (12%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSD--RRCMLSGSPDQV 102
EVI+ P +G VIG+GG IK LQ ETGA + SD R C+ + + +++
Sbjct: 23 EVIEA--PPEFIGHVIGEGGSTIKSLQCETGATITI--------SDGCRVCITADNKEKL 72
Query: 103 QEARARIEELIDSVMVEQFSGANFDKLRSTVLA 135
+A +R+ ++I++ + + G +LR A
Sbjct: 73 SDATSRVRDIINAAINPDYEGPEGSRLRKDAAA 105
>gi|320165866|gb|EFW42765.1| hypothetical protein CAOG_07897 [Capsaspora owczarzaki ATCC 30864]
Length = 556
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM-REDDPSDRRCMLSGSPDQVQ 103
E + +P + VG+VIG+ GD I++++ TGAR+Q +Q D +++ ++G+ ++
Sbjct: 211 EPFIMMIPTSRVGLVIGRSGDKIREIEARTGARLQMIQHGLPRDATEKPLHITGTQTVIE 270
Query: 104 EARARIEELI 113
A+ +EE I
Sbjct: 271 AAKLLVEEAI 280
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEA 105
+ V VP+ G V+G+ GD IK+LQ++TG R+QF + +D + R ++G + A
Sbjct: 300 TLDVQVPREFTGAVLGERGDTIKRLQHDTGTRIQF-RSGDDGAAIRTLQVTGEESATRRA 358
Query: 106 RARIEELID 114
A I+ +I+
Sbjct: 359 EAAIQVIIE 367
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
IQV VP G+VIGK G+ +K ++ TGAR+Q + + ++ +SG V+ A+
Sbjct: 411 IQVAVPARITGLVIGKSGENVKYMEQATGARIQLNKDAPPNAVEKFFNVSGEAAAVEAAQ 470
Query: 107 ARIEELIDSVMVEQ 120
+ E I+S+ E+
Sbjct: 471 NMLRERINSLQSER 484
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 41/64 (64%), Gaps = 2/64 (3%)
Query: 50 CVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARI 109
VP +G++IG+ G+ I++++++TG RVQ Q + +DR +SG + ++ A++ I
Sbjct: 103 SVPSHTIGLIIGRQGETIRRIESQTGVRVQCAQ--DGGSNDRVVTISGPAEGIELAKSMI 160
Query: 110 EELI 113
E+I
Sbjct: 161 REII 164
>gi|313151207|ref|NP_998159.2| heterogeneous nuclear ribonucleoprotein K [Danio rerio]
Length = 429
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 9/63 (14%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP----SDRRCMLSGSPDQVQ 103
QV +PK G +IGKGG IK++++E+GA ++ D+P DR ++G+ DQ+Q
Sbjct: 357 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-----DEPLQGSEDRIITITGTQDQIQ 411
Query: 104 EAR 106
A+
Sbjct: 412 NAQ 414
>gi|146336943|gb|ABQ23585.1| putative KH-domain containing protein [Medicago truncatula]
Length = 334
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 5/78 (6%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++ V +A G VIGKGG I Q+++GAR+Q + E P +DR M+SG+ ++V
Sbjct: 38 VRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNNEFFPGTTDRIIMVSGAINEVLR 97
Query: 105 ARARIEELIDSVMVEQFS 122
A +E ++ ++ E S
Sbjct: 98 A---VELILSKLLSELHS 112
>gi|196012987|ref|XP_002116355.1| hypothetical protein TRIADDRAFT_30852 [Trichoplax adhaerens]
gi|190580946|gb|EDV21025.1| hypothetical protein TRIADDRAFT_30852 [Trichoplax adhaerens]
Length = 97
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEA 105
+QV +PK G +IGKGG I+ ++ +GA ++ R + R +SG DQ+ EA
Sbjct: 23 TVQVSIPKDLAGSIIGKGGTRIRDVRERSGAMIKIDDARPGEDY-RVITISGGKDQIDEA 81
Query: 106 RARIEELIDSVMVEQFSGANF 126
+++ V Q+SG F
Sbjct: 82 HGLLQDC-----VRQYSGKQF 97
>gi|242063550|ref|XP_002453064.1| hypothetical protein SORBIDRAFT_04g037690 [Sorghum bicolor]
gi|241932895|gb|EES06040.1| hypothetical protein SORBIDRAFT_04g037690 [Sorghum bicolor]
Length = 343
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++ V A G +IGKGG I Q+++GAR+Q + E P +DR M+SG D+V +
Sbjct: 42 LRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFDEVMK 101
Query: 105 ARARIEELIDSVMVE 119
A +E +++ ++ E
Sbjct: 102 A---MELILEKLLAE 113
>gi|395733398|ref|XP_003776230.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 1
[Pongo abelii]
Length = 464
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++ +E+GA ++ + E DR
Sbjct: 376 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQICHESGASIKIDEPLEGS-EDRI 434
Query: 93 CMLSGSPDQVQEAR 106
++G+ +Q+Q A+
Sbjct: 435 ITITGTQEQIQNAQ 448
>gi|148706781|gb|EDL38728.1| mCG5013, isoform CRA_a [Mus musculus]
Length = 240
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 47/74 (63%), Gaps = 4/74 (5%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP+ AV ++IG+ G IK+L+ +TGAR+ ED +R ++SG P QV +A+A I
Sbjct: 3 VPQEAVKLIIGRQGANIKQLRKQTGARIDVDT--EDVGDERVLLISGFPVQVCKAKAAIH 60
Query: 111 ELI--DSVMVEQFS 122
+++ ++ + EQ S
Sbjct: 61 QILTENTPVFEQLS 74
>gi|395751404|ref|XP_003780598.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein Nova-2 [Pongo
abelii]
Length = 681
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEAR 106
++ VP + G++IGKGG +K + ++GA VQ Q E + +R +SG P+QV +A
Sbjct: 234 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAV 293
Query: 107 ARI 109
+ I
Sbjct: 294 SAI 296
Score = 38.9 bits (89), Expect = 0.74, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMR--EDDPSDRRCMLSGSPDQVQEARAR 108
+P A G +IGKGG I +LQ ETGA ++ ++R C++ G+ + + +
Sbjct: 139 IPSYAAGSIIGKGGQTIVQLQKETGATIKXXXXVPWHTGTTERVCLVQGTAEALNAVHSF 198
Query: 109 IEELIDSV 116
I E + +
Sbjct: 199 IAEKVREI 206
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.134 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,320,924,793
Number of Sequences: 23463169
Number of extensions: 97836931
Number of successful extensions: 247674
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1979
Number of HSP's successfully gapped in prelim test: 1599
Number of HSP's that attempted gapping in prelim test: 239340
Number of HSP's gapped (non-prelim): 9076
length of query: 138
length of database: 8,064,228,071
effective HSP length: 103
effective length of query: 35
effective length of database: 9,942,488,960
effective search space: 347987113600
effective search space used: 347987113600
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 71 (32.0 bits)