BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11065
(138 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q91WJ8|FUBP1_MOUSE Far upstream element-binding protein 1 OS=Mus musculus GN=Fubp1
PE=1 SV=1
Length = 651
Score = 63.9 bits (154), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/112 (39%), Positives = 64/112 (57%), Gaps = 12/112 (10%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ++ + R+ F +R NE G GG E I V +P+ AVG+VIG+ G+M
Sbjct: 241 QQAKEMVLELIRDQGGFREVR--NEYGSRIGGN-----EGIDVPIPRFAVGIVIGRNGEM 293
Query: 67 IKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+QN+ G R+QF + DD + DR ++G PD+ Q A I +L+ SV
Sbjct: 294 IKKIQNDAGVRIQF---KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSV 342
Score = 53.9 bits (128), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 7/95 (7%)
Query: 20 NDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQ 79
ND+FG R M E + VP VG +IG+GG+ I ++Q E+G ++Q
Sbjct: 78 NDSFGAQLPPMHQQQSRSVMTE------EYKVPDGMVGFIIGRGGEQISRIQQESGCKIQ 131
Query: 80 FVQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
P +R CML+G+P+ VQ A+ ++++++
Sbjct: 132 IAPDSGGLP-ERSCMLTGTPESVQSAKRLLDQIVE 165
Score = 48.9 bits (115), Expect = 9e-06, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 7/83 (8%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSD 90
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q ++ +D
Sbjct: 175 HGDGPGN------AVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 228
Query: 91 RRCMLSGSPDQVQEARARIEELI 113
+ ++G P +VQ+A+ + ELI
Sbjct: 229 KPLRITGDPYKVQQAKEMVLELI 251
Score = 46.6 bits (109), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
VP G++IGKGG+ IK + ++GAR++ + DP+ + + G+P Q+ AR
Sbjct: 379 VPTGKTGLIIGKGGETIKSISQQSGARIELQRSPPPNADPNMKLFTIRGTPQQIDYARQL 438
Query: 109 IEELI 113
IEE I
Sbjct: 439 IEEKI 443
>sp|Q32PX7|FUBP1_RAT Far upstream element-binding protein 1 OS=Rattus norvegicus
GN=Fubp1 PE=1 SV=1
Length = 639
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 56/96 (58%), Gaps = 11/96 (11%)
Query: 24 GNMREF-NENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ 82
G RE NE G GG E I V +P+ AVG+VIG+ G+MIKK+QN+ G R+QF
Sbjct: 254 GGFREVRNEYGSRIGGN-----EGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQF-- 306
Query: 83 MREDD--PSDRRCMLSGSPDQVQEARARIEELIDSV 116
+ DD DR ++G PD+ Q A I +L+ SV
Sbjct: 307 -KPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSV 341
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R CML+G+P+ VQ A+ ++
Sbjct: 102 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP-ERSCMLTGTPESVQSAKRLLD 160
Query: 111 ELID 114
++++
Sbjct: 161 QIVE 164
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 13/87 (14%)
Query: 31 ENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP-- 88
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q D P
Sbjct: 173 HHGDGPGNA------VQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQ---DGPQN 223
Query: 89 --SDRRCMLSGSPDQVQEARARIEELI 113
+D+ ++G P +VQ+A+ + ELI
Sbjct: 224 TGADKPLRITGDPYKVQQAKEMVLELI 250
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCM 94
GG+ E + VP G++IGKGG+ IK + ++GAR++ + DP+ +
Sbjct: 369 GGLQEFNF-----IVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFT 423
Query: 95 LSGSPDQVQEARARIEELI 113
+ G+P Q+ AR IEE I
Sbjct: 424 IRGTPQQIDYARQLIEEKI 442
>sp|Q96AE4|FUBP1_HUMAN Far upstream element-binding protein 1 OS=Homo sapiens GN=FUBP1
PE=1 SV=3
Length = 644
Score = 62.0 bits (149), Expect = 1e-09, Method: Composition-based stats.
Identities = 43/112 (38%), Positives = 64/112 (57%), Gaps = 12/112 (10%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ++ + R+ F +R NE G GG E I V +P+ AVG+VIG+ G+M
Sbjct: 245 QQAKEMVLELIRDQGGFREVR--NEYGSRIGGN-----EGIDVPIPRFAVGIVIGRNGEM 297
Query: 67 IKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+QN+ G R+QF + DD + +R ++G PD+ Q A I +L+ SV
Sbjct: 298 IKKIQNDAGVRIQF---KPDDGTTPERIAQITGPPDRCQHAAEIITDLLRSV 346
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 16 IGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETG 75
+ ND+FG R M E + VP VG +IG+GG+ I ++Q E+G
Sbjct: 78 VAPQNDSFGTQLPPMHQQQSRSVMTE------EYKVPDGMVGFIIGRGGEQISRIQQESG 131
Query: 76 ARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELID 114
++Q P +R CML+G+P+ VQ A+ ++++++
Sbjct: 132 CKIQIAPDSGGLP-ERSCMLTGTPESVQSAKRLLDQIVE 169
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 7/83 (8%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSD 90
+GDG G V ++ +P + G+VIGKGG+ IK+LQ G ++ +Q ++ +D
Sbjct: 179 HGDGPGN------AVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGAD 232
Query: 91 RRCMLSGSPDQVQEARARIEELI 113
+ ++G P +VQ+A+ + ELI
Sbjct: 233 KPLRITGDPYKVQQAKEMVLELI 255
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
VP G++IGKGG+ IK + ++GAR++ + DP+ + + G+P Q+ AR
Sbjct: 383 VPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFTIRGTPQQIDYARQL 442
Query: 109 IEELI 113
IEE I
Sbjct: 443 IEEKI 447
>sp|Q96I24|FUBP3_HUMAN Far upstream element-binding protein 3 OS=Homo sapiens GN=FUBP3
PE=1 SV=2
Length = 572
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD--PSDRRCMLSGSPDQVQE 104
I+V VP+ AVG+VIG+ G+MIKK+QN+ G R+QF + DD +R + G PD+ Q
Sbjct: 256 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQF---KPDDGISPERAAQVMGPPDRCQH 312
Query: 105 ARARIEELI 113
A I ELI
Sbjct: 313 AAHIISELI 321
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG +IG+GG+ I ++Q E+G ++Q P +R C+L+G+P+ +++A+ +
Sbjct: 84 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIP-ERPCVLTGTPESIEQAKRLLG 142
Query: 111 ELID 114
+++D
Sbjct: 143 QIVD 146
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 37 GGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ--MREDDPSDRRCM 94
GG+ E+T+ VP G+VIGKGG+ IK + ++GA V+ + DP+ RR
Sbjct: 352 GGVQEITY-----TVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNSDPNLRRFT 406
Query: 95 LSGSPDQVQEARARIEELI 113
+ G P Q++ AR I+E +
Sbjct: 407 IRGVPQQIEVARQLIDEKV 425
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 49/86 (56%), Gaps = 7/86 (8%)
Query: 32 NGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--- 88
NG G + + ++ +P + VG+VIG+GG+ IK+LQ TG ++ +Q D P
Sbjct: 150 NGPGFHNDIDSNSTIQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQ---DGPLPT 206
Query: 89 -SDRRCMLSGSPDQVQEARARIEELI 113
+D+ ++G +VQ+AR + E+I
Sbjct: 207 GADKPLRITGDAFKVQQAREMVLEII 232
>sp|Q92945|FUBP2_HUMAN Far upstream element-binding protein 2 OS=Homo sapiens GN=KHSRP
PE=1 SV=4
Length = 711
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I V VP+ +VGVVIG+ G+MIKK+QN+ G R+QF Q P ++ + G PD+ + A
Sbjct: 325 IDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGP-EKIAHIMGPPDRCEHAA 383
Query: 107 ARIEELIDSV 116
I +L+ S+
Sbjct: 384 RIINDLLQSL 393
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q ++G +VQ P +R L+G+P+ VQ+A+ ++
Sbjct: 151 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-ERSVSLTGAPESVQKAKMMLD 209
Query: 111 ELI 113
+++
Sbjct: 210 DIV 212
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 40 WEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCMLSG 97
W + +P G+VIG+GG+ +K + +TGA V+ + DP+ + ++ G
Sbjct: 420 WGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFIIRG 479
Query: 98 SPDQVQEARARIEELID 114
SP Q+ A+ IEE I+
Sbjct: 480 SPQQIDHAKQLIEEKIE 496
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSDRRCMLSGSPDQVQE 104
V ++ +P G+VIGKGG+ IK+LQ G ++ +Q ++ D+ + G P +VQ+
Sbjct: 235 VQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQ 294
Query: 105 A 105
A
Sbjct: 295 A 295
>sp|Q3U0V1|FUBP2_MOUSE Far upstream element-binding protein 2 OS=Mus musculus GN=Khsrp
PE=1 SV=2
Length = 748
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I V VP+ +VGVVIG+ G+MIKK+QN+ G R+QF Q P ++ + G PD+ + A
Sbjct: 326 IDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGP-EKIAHIMGPPDRCEHAA 384
Query: 107 ARIEELIDSV 116
I +L+ S+
Sbjct: 385 RIINDLLQSL 394
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q ++G +VQ P +R L+G+P+ VQ+A+ ++
Sbjct: 152 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-ERSVSLTGAPESVQKAKMMLD 210
Query: 111 ELI 113
+++
Sbjct: 211 DIV 213
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 40 WEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED--DPSDRRCMLSG 97
W + +P G+VIG+GG+ +K + +TGA V+ + DP+ + ++ G
Sbjct: 421 WGPPGGEMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFVIRG 480
Query: 98 SPDQVQEARARIEELID 114
SP Q+ A+ IEE I+
Sbjct: 481 SPQQIDHAKQLIEEKIE 497
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDPSDRRCMLSGSPDQVQE 104
V ++ +P G+VIGKGG+ IK+LQ G ++ +Q ++ D+ + G P +VQ+
Sbjct: 236 VQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQ 295
Query: 105 A 105
A
Sbjct: 296 A 296
>sp|Q99PF5|FUBP2_RAT Far upstream element-binding protein 2 OS=Rattus norvegicus
GN=Khsrp PE=1 SV=1
Length = 721
Score = 57.0 bits (136), Expect = 3e-08, Method: Composition-based stats.
Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ+ I R D G + NE G GG I V VP+ +VGVVIG+ G+M
Sbjct: 294 QQACEMVMDILRERDQ-GGFGDRNEYGSRVGGG-------IDVPVPRHSVGVVIGRSGEM 345
Query: 67 IKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+QN+ G R+QF Q P ++ + G PD+ + A I +L+ S+
Sbjct: 346 IKKIQNDAGVRIQFKQDDGTGP-EKIAHIMGPPDRCEHAARIINDLLQSL 394
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q ++G +VQ P +R L+G+P+ VQ+A+ ++
Sbjct: 152 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-ERSVSLTGAPESVQKAKMMLD 210
Query: 111 ELI 113
+++
Sbjct: 211 DIV 213
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
+P G+VIG+GG+ +K + +TGA V+ + DP+ + ++ GSP Q+ A+
Sbjct: 432 IPTHKCGLVIGRGGENVKAINQQTGAFVEISRQLPPNGDPNFKLFVIRGSPQQIDHAKQL 491
Query: 109 IEELID 114
IEE I+
Sbjct: 492 IEEKIE 497
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 30 NENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ-MREDDP 88
N NG G + E+ +P G+VIGKGG+ IK+LQ G ++ +Q ++
Sbjct: 227 NANGGQNGTVQEIM-------IPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTN 279
Query: 89 SDRRCMLSGSPDQVQEA 105
D+ + G P +VQ+A
Sbjct: 280 VDKPLRIIGDPYKVQQA 296
>sp|Q8UVD9|FUBP2_CHICK Far upstream element-binding protein 2 OS=Gallus gallus GN=KHSRP
PE=1 SV=1
Length = 769
Score = 55.5 bits (132), Expect = 9e-08, Method: Composition-based stats.
Identities = 40/110 (36%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 7 QQSRRWQQGIGRNNDNFGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDM 66
QQ+ I R D G + NE G GG I V VP+ +VGVVIG+ G+M
Sbjct: 356 QQACEMVMDILRERDQ-GGFGDRNEYGSRIGGG-------IDVPVPRHSVGVVIGRSGEM 407
Query: 67 IKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELIDSV 116
IKK+QN+ G R+QF Q P ++ + G P++ + A I +L+ S+
Sbjct: 408 IKKIQNDAGVRIQFKQDDGTGP-EKIAHIMGPPERCEHAARIINDLLQSL 456
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIE 110
VP VG++IG+GG+ I K+Q ++G +VQ P +R L+GSP+ VQ+A+ ++
Sbjct: 215 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP-ERSVSLTGSPEAVQKAKLMLD 273
Query: 111 ELI 113
+++
Sbjct: 274 DIV 276
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 7/79 (8%)
Query: 28 EFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD 87
+F++ +G+ G V ++ +P G+VIGKGG+ IK+LQ G ++ F+Q +
Sbjct: 286 QFHDYANGQNGT------VQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMIFIQDGSQN 339
Query: 88 PS-DRRCMLSGSPDQVQEA 105
+ D+ + G P +VQ+A
Sbjct: 340 TNVDKPLRIIGDPYKVQQA 358
Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQM--REDDPSDRRCMLSGSPDQVQEARAR 108
+P G+VIG+GG+ +K + + GA V+ + DP+ + ++ GSP Q++ A+
Sbjct: 493 IPTHKCGLVIGRGGENVKAINQQRGAFVEISRQLPPNGDPNFKLFIIRGSPQQIEHAKQP 552
Query: 109 IEELID 114
IEE I+
Sbjct: 553 IEEKIE 558
>sp|O19049|HNRPK_RABIT Heterogeneous nuclear ribonucleoprotein K OS=Oryctolagus cuniculus
GN=HNRNPK PE=2 SV=1
Length = 463
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 8/94 (8%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 376 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 434
Query: 93 CMLSGSPDQVQEARARIEELIDSVMVEQFSGANF 126
++G+ DQ+Q A+ ++ V+Q+SG F
Sbjct: 435 ITITGTQDQIQNAQYLLQN-----SVKQYSGKFF 463
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+++ + ++ G +IG G IK+L+ T ++ Q +DR ++ G PD+V E
Sbjct: 147 LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECI 206
Query: 107 ARIEELI 113
I +LI
Sbjct: 207 KIILDLI 213
>sp|Q9UNW9|NOVA2_HUMAN RNA-binding protein Nova-2 OS=Homo sapiens GN=NOVA2 PE=1 SV=1
Length = 492
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 41 EVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGS 98
E E++++ VP+ VG ++GKGG + + Q TGAR+Q + E P +RR ++GS
Sbjct: 403 ESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGS 462
Query: 99 PDQVQEARARIEELI 113
P Q A+ I + +
Sbjct: 463 PAATQAAQYLISQRV 477
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA 94
Query: 105 ARARIEELIDSV 116
+ I E + +
Sbjct: 95 VHSFIAEKVREI 106
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEAR 106
++ VP + G++IGKGG +K + ++GA VQ Q E + +R +SG P+QV +A
Sbjct: 134 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAV 193
Query: 107 ARI 109
+ I
Sbjct: 194 SAI 196
>sp|P61980|HNRPK_RAT Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus
GN=Hnrnpk PE=1 SV=1
Length = 463
Score = 50.1 bits (118), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 8/94 (8%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 376 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 434
Query: 93 CMLSGSPDQVQEARARIEELIDSVMVEQFSGANF 126
++G+ DQ+Q A+ ++ V+Q+SG F
Sbjct: 435 ITITGTQDQIQNAQYLLQN-----SVKQYSGKFF 463
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+++ + ++ G +IG G IK+L+ T ++ Q +DR ++ G PD+V E
Sbjct: 147 LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECI 206
Query: 107 ARIEELI 113
I +LI
Sbjct: 207 KIILDLI 213
>sp|P61979|HNRPK_MOUSE Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus GN=Hnrnpk
PE=1 SV=1
Length = 463
Score = 50.1 bits (118), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 8/94 (8%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 376 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 434
Query: 93 CMLSGSPDQVQEARARIEELIDSVMVEQFSGANF 126
++G+ DQ+Q A+ ++ V+Q+SG F
Sbjct: 435 ITITGTQDQIQNAQYLLQN-----SVKQYSGKFF 463
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+++ + ++ G +IG G IK+L+ T ++ Q +DR ++ G PD+V E
Sbjct: 147 LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECI 206
Query: 107 ARIEELI 113
I +LI
Sbjct: 207 KIILDLI 213
>sp|P61978|HNRPK_HUMAN Heterogeneous nuclear ribonucleoprotein K OS=Homo sapiens GN=HNRNPK
PE=1 SV=1
Length = 463
Score = 50.1 bits (118), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 8/94 (8%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 376 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 434
Query: 93 CMLSGSPDQVQEARARIEELIDSVMVEQFSGANF 126
++G+ DQ+Q A+ ++ V+Q+SG F
Sbjct: 435 ITITGTQDQIQNAQYLLQN-----SVKQYSGKFF 463
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+++ + ++ G +IG G IK+L+ T ++ Q +DR ++ G PD+V E
Sbjct: 147 LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECI 206
Query: 107 ARIEELI 113
I +LI
Sbjct: 207 KIILDLI 213
>sp|Q5ZIQ3|HNRPK_CHICK Heterogeneous nuclear ribonucleoprotein K OS=Gallus gallus
GN=HNRNPK PE=2 SV=1
Length = 427
Score = 49.7 bits (117), Expect = 6e-06, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 54/94 (57%), Gaps = 8/94 (8%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 340 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 398
Query: 93 CMLSGSPDQVQEARARIEELIDSVMVEQFSGANF 126
++G+ DQ+Q A+ ++ V+Q+SG F
Sbjct: 399 ITITGTQDQIQNAQYLLQN-----SVKQYSGKFF 427
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+++ + ++ G +IG G IK+L+ T ++ Q +DR ++ G PD+V E
Sbjct: 120 LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECI 179
Query: 107 ARIEELI 113
I +LI
Sbjct: 180 KIILDLI 186
>sp|Q5R5H8|HNRPK_PONAB Heterogeneous nuclear ribonucleoprotein K OS=Pongo abelii GN=HNRNPK
PE=2 SV=1
Length = 464
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 376 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 434
Query: 93 CMLSGSPDQVQEARARIE 110
++G+ DQ+Q A+ ++
Sbjct: 435 ITITGTQDQIQNAQYLLQ 452
Score = 32.7 bits (73), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+++ + ++ G +IG G IK+L+ T ++ Q +DR ++ G PD+V E
Sbjct: 147 LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECI 206
Query: 107 ARIEELI 113
I +LI
Sbjct: 207 KIILDLI 213
>sp|Q4R4M6|HNRPK_MACFA Heterogeneous nuclear ribonucleoprotein K OS=Macaca fascicularis
GN=HNRNPK PE=2 SV=1
Length = 464
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 376 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 434
Query: 93 CMLSGSPDQVQEARARIE 110
++G+ DQ+Q A+ ++
Sbjct: 435 ITITGTQDQIQNAQYLLQ 452
Score = 32.7 bits (73), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+++ + ++ G +IG G IK+L+ T ++ Q +DR ++ G PD+V E
Sbjct: 147 LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVECI 206
Query: 107 ARIEELI 113
I +LI
Sbjct: 207 KIILDLI 213
>sp|Q3T0D0|HNRPK_BOVIN Heterogeneous nuclear ribonucleoprotein K OS=Bos taurus GN=HNRNPK
PE=2 SV=1
Length = 464
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 47/78 (60%), Gaps = 3/78 (3%)
Query: 35 GRGGMWEVTWEVI--QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
GRG ++ +I QV +PK G +IGKGG IK++++E+GA ++ + E DR
Sbjct: 376 GRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGS-EDRI 434
Query: 93 CMLSGSPDQVQEARARIE 110
++G+ DQ+Q A+ ++
Sbjct: 435 ITITGTQDQIQNAQYLLQ 452
Score = 32.3 bits (72), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
+++ + ++ G +IG G IK+L+ T ++ Q +DR ++ G PD+V E
Sbjct: 147 LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPQSTDRVVLIGGKPDRVVECI 206
Query: 107 ARIEELI 113
I +LI
Sbjct: 207 KIILDLI 213
>sp|Q80VL1|TDRKH_MOUSE Tudor and KH domain-containing protein OS=Mus musculus GN=Tdrkh
PE=1 SV=1
Length = 560
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I++ VP+ AV ++IG+ G IK+L+ +TGAR+ ED +R ++SG P QV +A+
Sbjct: 55 IEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDT--EDVGDERVLLISGFPVQVCKAK 112
Query: 107 ARIEELI--DSVMVEQFS 122
A I +++ ++ + EQ S
Sbjct: 113 AAIHQILTENTPVFEQLS 130
Score = 33.9 bits (76), Expect = 0.33, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM-LSGSPDQVQEAR 106
Q+ VP+ +VG +IG+GG+ I+ + +GA++ + E R + +SG+ +V A+
Sbjct: 128 QLSVPQRSVGRIIGRGGETIRSICKASGAKITCDKESEGTLLLSRLIKISGTQKEVAAAK 187
Query: 107 ARIEELI 113
I E +
Sbjct: 188 HLILEKV 194
>sp|Q9Y2W6|TDRKH_HUMAN Tudor and KH domain-containing protein OS=Homo sapiens GN=TDRKH
PE=1 SV=2
Length = 561
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEAR 106
I++ VP+ AV ++IG+ G IK+L+ +TGAR+ ED +R ++SG P QV +A+
Sbjct: 55 IEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDT--EDVGDERVLLISGFPVQVCKAK 112
Query: 107 ARIEELI--DSVMVEQFS 122
A I +++ ++ + EQ S
Sbjct: 113 AAIHQILTENTPVSEQLS 130
Score = 33.9 bits (76), Expect = 0.29, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM-LSGSPDQVQEAR 106
Q+ VP+ +VG +IG+GG+ I+ + +GA++ + E R + +SG+ +V A+
Sbjct: 128 QLSVPQRSVGRIIGRGGETIRSICKASGAKITCDKESEGTLLLSRLIKISGTQKEVAAAK 187
Query: 107 ARIEELI 113
I E +
Sbjct: 188 HLILEKV 194
>sp|Q80WA4|NOVA1_RAT RNA-binding protein Nova-1 (Fragment) OS=Rattus norvegicus GN=Nova1
PE=2 SV=1
Length = 474
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
+V+++ VP+ VG ++GKGG + + Q TGAR+Q + E P +R+ ++G+P
Sbjct: 397 DVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAAT 456
Query: 103 QEARARIEELI 113
Q A+ I + I
Sbjct: 457 QAAQYLITQRI 467
Score = 46.2 bits (108), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 51 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALNA 110
Query: 105 ARARIEELI 113
I E I
Sbjct: 111 VHGFIAEKI 119
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
+++ VP + G++IGKGG +K + ++GA VQ Q + + +R +SG P+Q ++A
Sbjct: 149 VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 208
Query: 106 RARIEELIDSVMVEQFSGA 124
+E +I + + SG+
Sbjct: 209 ---VELIIQKIQEDPQSGS 224
>sp|Q9JKN6|NOVA1_MOUSE RNA-binding protein Nova-1 OS=Mus musculus GN=Nova1 PE=1 SV=2
Length = 507
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
+V+++ VP+ VG ++GKGG + + Q TGAR+Q + E P +R+ ++G+P
Sbjct: 422 DVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAAT 481
Query: 103 QEARARIEELI 113
Q A+ I + I
Sbjct: 482 QAAQYLITQRI 492
Score = 46.2 bits (108), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALNA 111
Query: 105 ARARIEELI 113
I E I
Sbjct: 112 VHGFIAEKI 120
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
+++ VP + G++IGKGG +K + ++GA VQ Q + + +R +SG P+Q ++A
Sbjct: 174 VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 233
Query: 106 RARIEELIDSVMVEQFSGA 124
+E +I + + SG+
Sbjct: 234 ---VELIIQKIQEDPQSGS 249
>sp|P51513|NOVA1_HUMAN RNA-binding protein Nova-1 OS=Homo sapiens GN=NOVA1 PE=1 SV=1
Length = 510
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
+V+++ VP+ VG ++GKGG + + Q TGAR+Q + E P +R+ ++G+P
Sbjct: 425 DVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAAT 484
Query: 103 QEARARIEELI 113
Q A+ I + I
Sbjct: 485 QAAQYLITQRI 495
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 5/72 (6%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDD-----PSDRRCMLSGSPDQ 101
++V +P A G +IGKGG I +LQ ETGA ++ ++ + ++R C++ G+ +
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKLSKSKDFYPGTTERVCLIQGTVEA 111
Query: 102 VQEARARIEELI 113
+ I E I
Sbjct: 112 LNAVHGFIAEKI 123
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
+++ VP + G++IGKGG +K + ++GA VQ Q + + +R +SG P+Q ++A
Sbjct: 177 VKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 236
Query: 106 RARIEELIDSVMVEQFSGA 124
+E +I + + SG+
Sbjct: 237 ---VELIIQKIQEDPQSGS 252
>sp|Q2PFW9|NOVA1_MACFA RNA-binding protein Nova-1 OS=Macaca fascicularis GN=NOVA1 PE=2
SV=1
Length = 483
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPS--DRRCMLSGSPDQV 102
+V+++ VP+ VG ++GKGG + + Q TGAR+Q + E P +R+ ++G+P
Sbjct: 398 DVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAAT 457
Query: 103 QEARARIEELI 113
Q A+ I + I
Sbjct: 458 QAAQYLITQRI 468
Score = 46.2 bits (108), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDP--SDRRCMLSGSPDQVQE 104
++V +P A G +IGKGG I +LQ ETGA ++ + ++ P ++R C++ G+ + +
Sbjct: 52 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNA 111
Query: 105 ARARIEELI 113
I E I
Sbjct: 112 VHGFIAEKI 120
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 47 IQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMRED-DPSDRRCMLSGSPDQVQEA 105
+++ VP + G++IGKGG +K + ++GA VQ Q + + +R +SG P+Q ++A
Sbjct: 150 VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKA 209
Query: 106 RARIEELIDSVMVEQFSGA 124
+E +I + + SG+
Sbjct: 210 ---VELIIQKIQEDPQSGS 225
>sp|Q99MQ1|BICC1_MOUSE Protein bicaudal C homolog 1 OS=Mus musculus GN=Bicc1 PE=2 SV=1
Length = 977
Score = 47.0 bits (110), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Query: 59 VIGKGGDMIKKLQNETGARVQFVQMREDDPSDR--RCMLSGSPDQVQEARARIEELIDSV 116
VIGKGG+ IKK+ +TG + F ++ +++ + ++G P V+ ARARI EL+ V
Sbjct: 149 VIGKGGNNIKKVMEDTGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVESARARIRELLPLV 208
Query: 117 MV 118
++
Sbjct: 209 LM 210
>sp|Q9Y6M1|IF2B2_HUMAN Insulin-like growth factor 2 mRNA-binding protein 2 OS=Homo sapiens
GN=IGF2BP2 PE=1 SV=2
Length = 599
Score = 46.6 bits (109), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E++ + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 428 EIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 487
Query: 105 ARARI 109
A+ RI
Sbjct: 488 AQGRI 492
Score = 34.7 bits (78), Expect = 0.19, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 13/59 (22%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARI 109
VP + G VIGKGG + +LQN T A V P D+ +PD+ +E RI
Sbjct: 516 VPSSTAGRVIGKGGKTVNELQNLTSAEVIV-------PRDQ------TPDENEEVIVRI 561
>sp|Q9H694|BICC1_HUMAN Protein bicaudal C homolog 1 OS=Homo sapiens GN=BICC1 PE=1 SV=2
Length = 974
Score = 46.6 bits (109), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 59 VIGKGGDMIKKLQNETGARVQFVQMREDDPSDR--RCMLSGSPDQVQEARARIEELIDSV 116
VIGKGG+ IKK+ ETG + F ++ +++ + ++G P V+ AR RI EL+ V
Sbjct: 147 VIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVESARVRIRELLPLV 206
Query: 117 MV 118
++
Sbjct: 207 LM 208
>sp|Q5RB68|IF2B2_PONAB Insulin-like growth factor 2 mRNA-binding protein 2 OS=Pongo abelii
GN=IGF2BP2 PE=2 SV=1
Length = 556
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 37/65 (56%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E++ + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 385 EIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 444
Query: 105 ARARI 109
A+ RI
Sbjct: 445 AQGRI 449
Score = 34.3 bits (77), Expect = 0.22, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 13/59 (22%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARI 109
VP + G VIGKGG + +LQN T A V P D+ +PD+ +E RI
Sbjct: 473 VPSSTAGRVIGKGGKTVNELQNLTSAEVIV-------PRDQ------TPDENEEVIVRI 518
>sp|Q5U4T7|BIC1B_XENLA Protein bicaudal C homolog 1-B OS=Xenopus laevis GN=bicc1-b PE=2
SV=1
Length = 970
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 59 VIGKGGDMIKKLQNETGARVQFVQMREDDPSDR--RCMLSGSPDQVQEARARIEELIDSV 116
VIGKGG+ IKK+ ETG + F ++ +++ + ++G P V+ AR RI EL+ V
Sbjct: 145 VIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVESARVRIRELLPLV 204
Query: 117 MV 118
++
Sbjct: 205 LM 206
>sp|Q9IA00|BIC1A_XENLA Protein bicaudal C homolog 1-A OS=Xenopus laevis GN=bicc1-a PE=2
SV=1
Length = 963
Score = 45.8 bits (107), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 59 VIGKGGDMIKKLQNETGARVQFVQMREDDPSDR--RCMLSGSPDQVQEARARIEELIDSV 116
VIGKGG+ IKK+ ETG + F ++ +++ + ++G P V+ AR RI EL+ V
Sbjct: 143 VIGKGGNNIKKVMEETGCHIHFPDSNRNNQAEKSNQVSIAGQPAGVESARVRIRELLPLV 202
Query: 117 MV 118
++
Sbjct: 203 LM 204
>sp|Q5SF07|IF2B2_MOUSE Insulin-like growth factor 2 mRNA-binding protein 2 OS=Mus musculus
GN=Igf2bp2 PE=1 SV=1
Length = 592
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 36/65 (55%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E + + +P AVG +IGK G IK+L GA ++ D S+R +++G P+ +
Sbjct: 421 ETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFK 480
Query: 105 ARARI 109
A+ RI
Sbjct: 481 AQGRI 485
Score = 35.0 bits (79), Expect = 0.15, Method: Composition-based stats.
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR---CMLSGSPDQVQEARA 107
VP + G VIGKGG + +LQN T A V + R+ P + + G Q A+
Sbjct: 509 VPSSTAGRVIGKGGKTVNELQNLTSAEV--IVPRDQTPDENEEVIVRIIGHFFASQTAQR 566
Query: 108 RIEELIDSVMVEQ 120
+I E++ V ++
Sbjct: 567 KIREIVQQVKQQE 579
>sp|Q08CK7|IF2B1_DANRE Insulin-like growth factor 2 mRNA-binding protein 1 OS=Danio rerio
GN=igf2bp1 PE=1 SV=1
Length = 598
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 37/77 (48%)
Query: 33 GDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
G G M E + V +P AVG +IGK G IK+L GA ++ D R
Sbjct: 396 GPPYGPMGASEQETVHVYIPAQAVGALIGKKGQHIKQLSRFAGASIKIAPAEAPDSKMRM 455
Query: 93 CMLSGSPDQVQEARARI 109
+++G P+ +A+ RI
Sbjct: 456 VIVTGPPEAQFKAQGRI 472
Score = 35.4 bits (80), Expect = 0.097, Method: Composition-based stats.
Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Query: 23 FGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ 82
+G ++E N G EV E + V AA G VIGKGG + +LQN T A V +
Sbjct: 473 YGKLKEENFFGPKE----EVKLET-HIKVAAAAAGRVIGKGGKTVNELQNLTAAEVVVPR 527
Query: 83 MREDDPSDRRCM-LSGSPDQVQEARARIEELIDSVMVEQFSGA 124
+ D D+ + + G Q A+ +I +++ V +Q G
Sbjct: 528 EQTPDEHDQVIVKIIGHFYASQLAQRKIRDILTQVKQQQKGGG 570
>sp|P57721|PCBP3_HUMAN Poly(rC)-binding protein 3 OS=Homo sapiens GN=PCBP3 PE=2 SV=2
Length = 371
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 35/57 (61%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQV 102
+++ VP + G +IGKGG IK+++ TGA+VQ + ++R +SG+PD +
Sbjct: 131 TLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAI 187
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 8/87 (9%)
Query: 56 VGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARI-----E 110
VG +IGK G+ +KK++ E+GAR + + E + +R ++G D + +A A I E
Sbjct: 57 VGSIIGKKGETVKKMREESGAR---INISEGNCPERIVTITGPTDAIFKAFAMIAYKFEE 113
Query: 111 ELIDSVMVEQFSGANFDKLRSTVLANR 137
++I+S+ + LR V A++
Sbjct: 114 DIINSMSNSPATSKPPVTLRLVVPASQ 140
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
++ +P +G +IG+ G I +++ +GA+++ E S+R+ ++G+P + A
Sbjct: 297 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGS-SERQITITGTPANISLA-- 353
Query: 108 RIEELIDSVMVEQFSG 123
+ LI++ + + +G
Sbjct: 354 --QYLINARLTSEVTG 367
>sp|P57722|PCBP3_MOUSE Poly(rC)-binding protein 3 OS=Mus musculus GN=Pcbp3 PE=2 SV=3
Length = 371
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 35/57 (61%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQV 102
+++ VP + G +IGKGG IK+++ TGA+VQ + ++R +SG+PD +
Sbjct: 131 TLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAI 187
Score = 36.6 bits (83), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 8/87 (9%)
Query: 56 VGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARI-----E 110
VG +IGK G+ +KK++ E+GAR + + E + +R ++G D + +A A I E
Sbjct: 57 VGSIIGKKGETVKKMREESGAR---INISEGNCPERIVTITGPTDAIFKAFAMIAYKFEE 113
Query: 111 ELIDSVMVEQFSGANFDKLRSTVLANR 137
++I+S+ + LR V A++
Sbjct: 114 DIINSMSNSPATSKPPVTLRLVVPASQ 140
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 48 QVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA 107
++ +P +G +IG+ G I +++ +GA+++ E S+R+ ++G+P + A
Sbjct: 297 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGS-SERQITITGTPANISLA-- 353
Query: 108 RIEELIDSVMVEQFSG 123
+ LI++ + + +G
Sbjct: 354 --QYLINARLTSEVTG 367
>sp|Q9PW80|IF2B3_DANRE Insulin-like growth factor 2 mRNA-binding protein 3 OS=Danio rerio
GN=igf2bp3 PE=1 SV=1
Length = 582
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E + + +P AVG +IGK G IK+L GA ++ D R ++SG P+ +
Sbjct: 409 ETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPADGIDAKQRMVIISGPPEAQFK 468
Query: 105 ARARI 109
A+ RI
Sbjct: 469 AQGRI 473
Score = 42.4 bits (98), Expect = 9e-04, Method: Composition-based stats.
Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 6/99 (6%)
Query: 23 FGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ 82
FG ++E N G EV E + VP A G VIGKGG + +LQN T A V +
Sbjct: 474 FGKLKEENFFGPKE----EVKLEA-HIKVPSFAAGRVIGKGGKTVNELQNLTSAEVVVPR 528
Query: 83 MREDDPSDRRCM-LSGSPDQVQEARARIEELIDSVMVEQ 120
+ D +D+ + ++G Q A+ +I+E+I V +Q
Sbjct: 529 DQTPDENDQVVVKITGHFYASQLAQRKIQEIISQVRRQQ 567
>sp|O88477|IF2B1_MOUSE Insulin-like growth factor 2 mRNA-binding protein 1 OS=Mus musculus
GN=Igf2bp1 PE=1 SV=1
Length = 577
Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 35/65 (53%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E++QV +P AVG +IGK G IK+L A ++ D R +++G P+ +
Sbjct: 406 EMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVVITGPPEAQFK 465
Query: 105 ARARI 109
A+ RI
Sbjct: 466 AQGRI 470
Score = 35.8 bits (81), Expect = 0.082, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Query: 23 FGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ 82
+G ++E N G EV E + VP +A G VIGKGG + +LQN T A V +
Sbjct: 471 YGKLKEENFFGPKE----EVKLET-HIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPR 525
Query: 83 MREDDPSDRRCM-LSGSPDQVQEARARIEELIDSVMVEQFSG 123
+ D +D+ + + G Q A+ +I +++ V + G
Sbjct: 526 DQTPDENDQVIVKIIGHFYASQMAQRKIRDILAQVKQQHQKG 567
>sp|Q9NZI8|IF2B1_HUMAN Insulin-like growth factor 2 mRNA-binding protein 1 OS=Homo sapiens
GN=IGF2BP1 PE=1 SV=2
Length = 577
Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 35/65 (53%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E++QV +P AVG +IGK G IK+L A ++ D R +++G P+ +
Sbjct: 406 EMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGPPEAQFK 465
Query: 105 ARARI 109
A+ RI
Sbjct: 466 AQGRI 470
Score = 35.4 bits (80), Expect = 0.097, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Query: 23 FGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ 82
+G ++E N G EV E + VP +A G VIGKGG + +LQN T A V +
Sbjct: 471 YGKLKEENFFGPKE----EVKLET-HIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPR 525
Query: 83 MREDDPSDRRCM-LSGSPDQVQEARARIEELIDSVMVEQFSG 123
+ D +D+ + + G Q A+ +I +++ V + G
Sbjct: 526 DQTPDENDQVIVKIIGHFYASQMAQRKIRDILAQVKQQHQKG 567
>sp|Q9C7C3|C3H36_ARATH Zinc finger CCCH domain-containing protein 36 OS=Arabidopsis
thaliana GN=At3g12130 PE=2 SV=1
Length = 248
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 7/102 (6%)
Query: 16 IGRNNDNFGNMREFNENGDGRGGMWEVT----WEVIQVCVPKAAVGVVIGKGGDMIKKLQ 71
+ RN GN F+ G G G V+ + V + G +IGKGG K++
Sbjct: 83 VSRNMQGSGNGGRFS--GRGESGPGHVSNFGDSATARFSVDASLAGAIIGKGGVSSKQIC 140
Query: 72 NETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELI 113
+TG ++ +Q E DP+ + +L G+ +Q+ EA A +++LI
Sbjct: 141 RQTGVKLS-IQDHERDPNLKNIVLEGTLEQISEASAMVKDLI 181
>sp|Q8CGX0|IF2B1_RAT Insulin-like growth factor 2 mRNA-binding protein 1 OS=Rattus
norvegicus GN=Igf2bp1 PE=1 SV=1
Length = 577
Score = 43.1 bits (100), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 35/65 (53%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E++QV +P AVG +IGK G IK+L A ++ D R +++G P+ +
Sbjct: 406 EMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVVITGPPEAQFK 465
Query: 105 ARARI 109
A+ RI
Sbjct: 466 AQGRI 470
Score = 35.4 bits (80), Expect = 0.10, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Query: 23 FGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ 82
+G ++E N G EV E + VP +A G VIGKGG + +LQN T A V +
Sbjct: 471 YGKLKEENFFGPKE----EVKLET-HIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPR 525
Query: 83 MREDDPSDRRCM-LSGSPDQVQEARARIEELIDSVMVEQFSG 123
+ D +D+ + + G Q A+ +I +++ V + G
Sbjct: 526 DQTPDENDQVIVKIIGHFYASQMAQRKIRDILAQVKQQHQKG 567
>sp|O73932|IF23A_XENLA Insulin-like growth factor 2 mRNA-binding protein 3-A OS=Xenopus
laevis GN=igf2bp3-a PE=1 SV=1
Length = 594
Score = 42.4 bits (98), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E + + +P AVG +IGK G IK+L GA ++ D R +++G P+ +
Sbjct: 419 ETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGPPEAQFK 478
Query: 105 ARARI 109
A+ RI
Sbjct: 479 AQGRI 483
Score = 37.4 bits (85), Expect = 0.026, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 23 FGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ 82
+G ++E N G EV E + VP A G VIGKGG + +LQN T A V +
Sbjct: 484 YGKLKEENFFGPKE----EVKLET-HIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVVPR 538
Query: 83 MREDDPSDRRCM-LSGSPDQVQEARARIEELI 113
+ D +D + ++G Q A+ +I+E++
Sbjct: 539 DQTPDENDEVVVKITGHFYASQLAQRKIQEIL 570
>sp|O57526|IF23B_XENLA Insulin-like growth factor 2 mRNA-binding protein 3-B OS=Xenopus
laevis GN=igf2bp3-b PE=1 SV=1
Length = 593
Score = 42.4 bits (98), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E + + +P AVG +IGK G IK+L GA ++ D R +++G P+ +
Sbjct: 418 ETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGPPEAQFK 477
Query: 105 ARARI 109
A+ RI
Sbjct: 478 AQGRI 482
Score = 37.7 bits (86), Expect = 0.021, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 23 FGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ 82
+G ++E N G EV E + VP A G VIGKGG + +LQN T A V +
Sbjct: 483 YGKLKEENFFGPKE----EVKLEA-HIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVVPR 537
Query: 83 MREDDPSDRRCM-LSGSPDQVQEARARIEELI 113
+ D +D+ + ++G Q A+ +I+E++
Sbjct: 538 DQTPDENDQVVVKITGHFYASQLAQRKIQEIL 569
>sp|Q5ZLP8|IF2B3_CHICK Insulin-like growth factor 2 mRNA-binding protein 3 OS=Gallus
gallus GN=IGF2BP3 PE=2 SV=1
Length = 584
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E + + +P AVG +IGK G IK+L GA ++ D R +++G P+ +
Sbjct: 410 ETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGPPEAQFK 469
Query: 105 ARARI 109
A+ RI
Sbjct: 470 AQGRI 474
Score = 37.7 bits (86), Expect = 0.019, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 23 FGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ 82
+G ++E N G EV E + VP A G VIGKGG + +LQN T A V +
Sbjct: 475 YGKLKEENFFGPKE----EVKLEA-HIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVVPR 529
Query: 83 MREDDPSDRRCM-LSGSPDQVQEARARIEELI 113
+ D +D+ + ++G Q A+ +I+E++
Sbjct: 530 DQTPDENDQVVVKITGHFYACQLAQRKIQEIL 561
>sp|Q9CPN8|IF2B3_MOUSE Insulin-like growth factor 2 mRNA-binding protein 3 OS=Mus musculus
GN=Igf2bp3 PE=1 SV=1
Length = 579
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 34/65 (52%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E + + +P +VG +IGK G IK+L GA ++ D R +++G P+ +
Sbjct: 406 ETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFK 465
Query: 105 ARARI 109
A+ RI
Sbjct: 466 AQGRI 470
Score = 36.2 bits (82), Expect = 0.065, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM-LSGSPDQVQEARARI 109
VP A G VIGKGG + +LQ+ + A V + + D +D+ + ++G Q A+ +I
Sbjct: 494 VPSFAAGRVIGKGGKTVNELQSLSSAEVVVPRDQTPDENDQVVVKITGHFYACQVAQRKI 553
Query: 110 EELIDSVMVEQ 120
+E++ V Q
Sbjct: 554 QEILTQVKQHQ 564
>sp|O00425|IF2B3_HUMAN Insulin-like growth factor 2 mRNA-binding protein 3 OS=Homo sapiens
GN=IGF2BP3 PE=1 SV=2
Length = 579
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 34/65 (52%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E + + +P +VG +IGK G IK+L GA ++ D R +++G P+ +
Sbjct: 406 ETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQFK 465
Query: 105 ARARI 109
A+ RI
Sbjct: 466 AQGRI 470
Score = 38.1 bits (87), Expect = 0.016, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 51 VPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCM-LSGSPDQVQEARARI 109
VP A G VIGKGG + +LQN + A V + + D +D+ + ++G Q A+ +I
Sbjct: 494 VPSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQTPDENDQVVVKITGHFYACQVAQRKI 553
Query: 110 EELIDSVMVEQ 120
+E++ V Q
Sbjct: 554 QEILTQVKQHQ 564
>sp|O42254|IF2B1_CHICK Insulin-like growth factor 2 mRNA-binding protein 1 OS=Gallus
gallus GN=IGF2BP1 PE=1 SV=1
Length = 576
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 33/65 (50%)
Query: 45 EVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQE 104
E + V +P AVG +IGK G IK+L A ++ D R +++G P+ +
Sbjct: 405 ETVHVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVVITGPPEAQFK 464
Query: 105 ARARI 109
A+ RI
Sbjct: 465 AQGRI 469
Score = 35.0 bits (79), Expect = 0.15, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 23 FGNMREFNENGDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQ 82
+G ++E N G EV E + VP +A G VIGKGG + +LQN T A V V
Sbjct: 470 YGKLKEENFFGPKE----EVKLET-HIRVPASAAGRVIGKGGKTVNELQNLTAAEV--VV 522
Query: 83 MREDDPSD 90
R+ P +
Sbjct: 523 PRDQTPDE 530
>sp|A1K7B5|PNP_AZOSB Polyribonucleotide nucleotidyltransferase OS=Azoarcus sp. (strain
BH72) GN=pnp PE=3 SV=1
Length = 699
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 33 GDGRGGMWEVTWEVIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRR 92
G RG + E ++ + + + VIGKGG +I+ LQ ETG ++ EDD S
Sbjct: 543 GVARGEVSEFAPRMLNMKINPEKIRDVIGKGGAVIRALQEETGTVIEI----EDDGS--I 596
Query: 93 CMLSGSPDQVQEARARIEELIDSVMV 118
+ S S + Q+A+ARIE++ V V
Sbjct: 597 TISSVSAEGAQKAKARIEDITAEVEV 622
>sp|O19048|PCBP1_RABIT Poly(rC)-binding protein 1 OS=Oryctolagus cuniculus GN=PCBP1 PE=2
SV=1
Length = 356
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEA 105
+++ VP G +IGKGG IK+++ TGA+VQ + ++R ++G P V E
Sbjct: 99 TLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTEC 158
Query: 106 RARIEELIDSVMVEQFS 122
+ I VM+E S
Sbjct: 159 VKQ----ICLVMLETLS 171
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%), Gaps = 7/67 (10%)
Query: 56 VGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA----RIEE 111
VG +IGK G+ +K+++ E+GAR + + E + +R L+G + + +A A ++EE
Sbjct: 25 VGSIIGKKGESVKRIREESGAR---INISEGNCPERIITLTGPTNAIFKAFAMIIDKLEE 81
Query: 112 LIDSVMV 118
I+S M
Sbjct: 82 DINSSMT 88
>sp|P60335|PCBP1_MOUSE Poly(rC)-binding protein 1 OS=Mus musculus GN=Pcbp1 PE=1 SV=1
Length = 356
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEA 105
+++ VP G +IGKGG IK+++ TGA+VQ + ++R ++G P V E
Sbjct: 99 TLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTEC 158
Query: 106 RARIEELIDSVMVEQFS 122
+ I VM+E S
Sbjct: 159 VKQ----ICLVMLETLS 171
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%), Gaps = 7/67 (10%)
Query: 56 VGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA----RIEE 111
VG +IGK G+ +K+++ E+GAR + + E + +R L+G + + +A A ++EE
Sbjct: 25 VGSIIGKKGESVKRIREESGAR---INISEGNCPERIITLTGPTNAIFKAFAMIIDKLEE 81
Query: 112 LIDSVMV 118
I+S M
Sbjct: 82 DINSSMT 88
>sp|Q15365|PCBP1_HUMAN Poly(rC)-binding protein 1 OS=Homo sapiens GN=PCBP1 PE=1 SV=2
Length = 356
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEA 105
+++ VP G +IGKGG IK+++ TGA+VQ + ++R ++G P V E
Sbjct: 99 TLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTEC 158
Query: 106 RARIEELIDSVMVEQFS 122
+ I VM+E S
Sbjct: 159 VKQ----ICLVMLETLS 171
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%), Gaps = 7/67 (10%)
Query: 56 VGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA----RIEE 111
VG +IGK G+ +K+++ E+GAR + + E + +R L+G + + +A A ++EE
Sbjct: 25 VGSIIGKKGESVKRIREESGAR---INISEGNCPERIITLTGPTNAIFKAFAMIIDKLEE 81
Query: 112 LIDSVMV 118
I+S M
Sbjct: 82 DINSSMT 88
>sp|Q5E9A3|PCBP1_BOVIN Poly(rC)-binding protein 1 OS=Bos taurus GN=PCBP1 PE=2 SV=1
Length = 356
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 46 VIQVCVPKAAVGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEA 105
+++ VP G +IGKGG IK+++ TGA+VQ + ++R ++G P V E
Sbjct: 99 TLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTEC 158
Query: 106 RARIEELIDSVMVEQFS 122
+ I VM+E S
Sbjct: 159 VKQ----ICLVMLETLS 171
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%), Gaps = 7/67 (10%)
Query: 56 VGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARA----RIEE 111
VG +IGK G+ +K+++ E+GAR + + E + +R L+G + + +A A ++EE
Sbjct: 25 VGSIIGKKGESVKRIREESGAR---INISEGNCPERIITLTGPTNAIFKAFAMIIDKLEE 81
Query: 112 LIDSVMV 118
I+S M
Sbjct: 82 DINSSMT 88
>sp|B3DZ86|PNP_METI4 Polyribonucleotide nucleotidyltransferase OS=Methylacidiphilum
infernorum (isolate V4) GN=pnp PE=3 SV=2
Length = 707
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 6/63 (9%)
Query: 56 VGVVIGKGGDMIKKLQNETGARVQFVQMREDDPSDRRCMLSGSPDQVQEARARIEELIDS 115
+G++IG GG IKK+ E+GA + EDD + + S S D ++ AR IE+++
Sbjct: 570 IGLLIGPGGKTIKKISAESGAEITI----EDDGT--VMIYSSSADSLEAAREMIEDMVGE 623
Query: 116 VMV 118
V V
Sbjct: 624 VTV 626
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,184,679
Number of Sequences: 539616
Number of extensions: 2349969
Number of successful extensions: 7787
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 290
Number of HSP's successfully gapped in prelim test: 297
Number of HSP's that attempted gapping in prelim test: 7300
Number of HSP's gapped (non-prelim): 754
length of query: 138
length of database: 191,569,459
effective HSP length: 103
effective length of query: 35
effective length of database: 135,989,011
effective search space: 4759615385
effective search space used: 4759615385
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)