Query psy11066
Match_columns 70
No_of_seqs 105 out of 1007
Neff 9.9
Searched_HMMs 29240
Date Fri Aug 16 17:10:48 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11066.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11066hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2qsi_A Putative hydrogenase ex 99.9 1.3E-22 4.6E-27 107.2 8.3 68 2-69 53-122 (137)
2 2qgv_A Hydrogenase-1 operon pr 99.9 1.9E-22 6.4E-27 107.0 6.9 68 2-69 54-124 (140)
3 3zzx_A Thioredoxin; oxidoreduc 99.9 1.7E-20 5.8E-25 95.2 10.2 67 2-68 38-104 (105)
4 2av4_A Thioredoxin-like protei 99.8 1.7E-19 5.9E-24 97.1 6.3 69 1-69 58-138 (160)
5 2es7_A Q8ZP25_salty, putative 99.8 4.3E-19 1.5E-23 94.2 6.6 69 1-69 53-124 (142)
6 4euy_A Uncharacterized protein 99.8 7.7E-18 2.6E-22 84.6 8.3 68 2-69 36-104 (105)
7 3f3q_A Thioredoxin-1; His TAG, 99.7 7.6E-17 2.6E-21 81.6 10.2 68 2-69 42-109 (109)
8 1gh2_A Thioredoxin-like protei 99.7 8.3E-17 2.9E-21 80.8 10.3 68 2-69 39-106 (107)
9 3qfa_C Thioredoxin; protein-pr 99.7 6.2E-17 2.1E-21 82.7 9.7 68 2-69 49-116 (116)
10 3gnj_A Thioredoxin domain prot 99.7 8.9E-17 3.1E-21 80.9 10.1 68 2-69 40-109 (111)
11 3m9j_A Thioredoxin; oxidoreduc 99.7 1.8E-16 6.2E-21 79.1 10.2 68 2-69 38-105 (105)
12 3die_A Thioredoxin, TRX; elect 99.7 1.8E-16 6.2E-21 79.1 10.0 68 2-69 37-106 (106)
13 3tco_A Thioredoxin (TRXA-1); d 99.7 2.6E-16 8.7E-21 78.8 10.2 68 2-69 39-108 (109)
14 2trx_A Thioredoxin; electron t 99.7 2.1E-16 7.2E-21 79.2 9.8 69 2-70 38-108 (108)
15 2ppt_A Thioredoxin-2; thiredox 99.7 1.3E-16 4.4E-21 85.3 9.4 68 2-69 82-151 (155)
16 1xfl_A Thioredoxin H1; AT3G510 99.7 3.6E-16 1.2E-20 80.8 10.3 69 2-70 56-124 (124)
17 2l6c_A Thioredoxin; oxidoreduc 99.7 1.6E-16 5.4E-21 80.5 8.7 68 2-69 37-105 (110)
18 1oaz_A Thioredoxin 1; immune s 99.7 4E-17 1.4E-21 84.4 6.6 70 1-70 52-123 (123)
19 1r26_A Thioredoxin; redox-acti 99.7 4E-16 1.4E-20 80.9 10.2 68 2-69 55-122 (125)
20 3evi_A Phosducin-like protein 99.7 7.6E-17 2.6E-21 83.3 7.4 65 1-68 40-112 (118)
21 2voc_A Thioredoxin; electron t 99.7 1.7E-16 5.9E-21 80.4 8.4 68 2-69 35-104 (112)
22 1nsw_A Thioredoxin, TRX; therm 99.7 3.8E-16 1.3E-20 78.0 9.3 68 2-69 35-104 (105)
23 1t00_A Thioredoxin, TRX; redox 99.7 4.9E-16 1.7E-20 78.4 9.8 68 2-69 41-110 (112)
24 2vim_A Thioredoxin, TRX; thior 99.7 7.1E-16 2.4E-20 76.7 10.2 68 2-69 37-104 (104)
25 2e0q_A Thioredoxin; electron t 99.7 7.6E-16 2.6E-20 76.3 10.3 68 2-69 34-102 (104)
26 1thx_A Thioredoxin, thioredoxi 99.7 7.2E-16 2.5E-20 77.8 10.3 68 2-69 43-112 (115)
27 1dby_A Chloroplast thioredoxin 99.7 4.7E-16 1.6E-20 77.8 9.5 69 2-70 37-107 (107)
28 3p2a_A Thioredoxin 2, putative 99.7 5.2E-16 1.8E-20 81.9 9.9 68 2-69 73-142 (148)
29 1v98_A Thioredoxin; oxidoreduc 99.7 6.8E-16 2.3E-20 80.8 10.2 68 2-69 68-137 (140)
30 1syr_A Thioredoxin; SGPP, stru 99.7 7.4E-16 2.5E-20 78.0 10.0 68 2-69 44-111 (112)
31 1ep7_A Thioredoxin CH1, H-type 99.7 7.3E-16 2.5E-20 77.7 9.9 68 2-69 42-110 (112)
32 2wz9_A Glutaredoxin-3; protein 99.7 7.3E-16 2.5E-20 82.0 10.3 68 2-69 50-117 (153)
33 1fb6_A Thioredoxin M; electron 99.7 7.7E-16 2.6E-20 76.7 9.8 68 2-69 36-105 (105)
34 1w4v_A Thioredoxin, mitochondr 99.7 9E-16 3.1E-20 78.5 10.3 68 2-69 49-118 (119)
35 2i4a_A Thioredoxin; acidophIle 99.7 4.7E-16 1.6E-20 77.7 9.0 68 2-69 38-107 (107)
36 3hz4_A Thioredoxin; NYSGXRC, P 99.7 3.1E-16 1.1E-20 82.3 8.6 68 2-69 42-111 (140)
37 2pu9_C TRX-F, thioredoxin F-ty 99.7 6.7E-16 2.3E-20 77.9 9.5 69 2-70 42-111 (111)
38 2o8v_B Thioredoxin 1; disulfid 99.7 3.9E-16 1.3E-20 81.1 8.8 69 2-70 58-128 (128)
39 2vm1_A Thioredoxin, thioredoxi 99.7 1.2E-15 4.1E-20 77.4 10.3 68 2-69 46-113 (118)
40 2yzu_A Thioredoxin; redox prot 99.7 1.1E-15 3.7E-20 76.4 9.9 68 2-69 36-105 (109)
41 3d6i_A Monothiol glutaredoxin- 99.7 8.5E-16 2.9E-20 77.6 9.5 68 2-69 39-108 (112)
42 2vlu_A Thioredoxin, thioredoxi 99.7 1.2E-15 4.2E-20 78.0 10.2 68 2-69 52-119 (122)
43 3uvt_A Thioredoxin domain-cont 99.7 1.1E-15 3.9E-20 76.7 9.8 68 2-69 39-111 (111)
44 1xwb_A Thioredoxin; dimerizati 99.7 1.6E-15 5.4E-20 75.6 10.1 68 2-69 38-106 (106)
45 2xc2_A Thioredoxinn; oxidoredu 99.7 1.2E-15 4.2E-20 77.6 9.9 67 2-69 51-117 (117)
46 2i1u_A Thioredoxin, TRX, MPT46 99.7 6.5E-16 2.2E-20 78.8 8.8 68 2-69 48-117 (121)
47 3ul3_B Thioredoxin, thioredoxi 99.7 3.6E-16 1.2E-20 80.9 7.6 67 2-68 60-128 (128)
48 1faa_A Thioredoxin F; electron 99.7 1.9E-15 6.5E-20 77.5 10.0 69 2-70 55-124 (124)
49 2oe3_A Thioredoxin-3; electron 99.7 1.8E-15 6.3E-20 77.1 9.9 66 2-67 48-113 (114)
50 3d22_A TRXH4, thioredoxin H-ty 99.7 1.8E-15 6.2E-20 79.0 9.8 68 2-69 64-131 (139)
51 1ti3_A Thioredoxin H, PTTRXH1; 99.7 1.2E-15 4.2E-20 76.9 8.3 68 2-69 44-111 (113)
52 3gix_A Thioredoxin-like protei 99.7 1.7E-15 5.9E-20 80.6 8.9 68 2-69 41-120 (149)
53 2j23_A Thioredoxin; immune pro 99.6 2.5E-15 8.6E-20 77.1 8.4 69 2-70 51-121 (121)
54 3qou_A Protein YBBN; thioredox 99.6 3E-15 1E-19 85.9 9.5 69 1-69 43-113 (287)
55 3emx_A Thioredoxin; structural 99.6 1.9E-15 6.4E-20 79.0 7.8 67 2-69 49-125 (135)
56 1x5d_A Protein disulfide-isome 99.6 2.3E-15 7.8E-20 77.8 7.9 69 1-69 42-116 (133)
57 2djk_A PDI, protein disulfide- 99.6 9E-16 3.1E-20 80.2 6.3 67 2-69 40-114 (133)
58 2f51_A Thioredoxin; electron t 99.6 7.3E-15 2.5E-19 75.2 9.4 68 2-69 41-112 (118)
59 2l57_A Uncharacterized protein 99.6 8E-15 2.7E-19 75.4 9.3 68 2-69 44-116 (126)
60 2l5l_A Thioredoxin; structural 99.6 7.4E-15 2.5E-19 76.7 9.2 67 2-69 56-125 (136)
61 2dj1_A Protein disulfide-isome 99.6 5.4E-15 1.8E-19 77.1 8.2 68 1-69 51-123 (140)
62 3dxb_A Thioredoxin N-terminall 99.6 7.5E-15 2.6E-19 82.1 9.3 68 2-69 48-117 (222)
63 1x5e_A Thioredoxin domain cont 99.6 7.2E-15 2.5E-19 75.6 8.3 67 2-69 40-109 (126)
64 3apq_A DNAJ homolog subfamily 99.6 7.5E-15 2.6E-19 81.4 8.4 68 2-69 132-201 (210)
65 2dml_A Protein disulfide-isome 99.6 6.6E-15 2.3E-19 75.9 7.7 69 1-69 52-123 (130)
66 3hxs_A Thioredoxin, TRXP; elec 99.6 1.8E-14 6.1E-19 75.2 9.1 67 2-69 69-138 (141)
67 3h79_A Thioredoxin-like protei 99.6 1.2E-14 3.9E-19 75.0 7.7 67 2-68 51-126 (127)
68 3ga4_A Dolichyl-diphosphooligo 99.6 3.1E-15 1.1E-19 82.0 5.8 69 1-69 61-152 (178)
69 1a8l_A Protein disulfide oxido 99.6 1.8E-14 6E-19 80.2 8.5 69 2-70 152-226 (226)
70 3cxg_A Putative thioredoxin; m 99.6 2.6E-14 8.9E-19 74.6 8.6 67 2-69 58-128 (133)
71 1mek_A Protein disulfide isome 99.6 6.8E-15 2.3E-19 74.5 6.2 69 1-69 41-116 (120)
72 1nho_A Probable thioredoxin; b 99.6 1.3E-14 4.4E-19 69.9 6.9 65 1-69 18-84 (85)
73 1qgv_A Spliceosomal protein U5 99.6 1.2E-14 4.2E-19 76.7 7.0 68 2-69 41-120 (142)
74 1fo5_A Thioredoxin; disulfide 99.6 1.4E-14 4.9E-19 69.7 6.6 65 1-69 19-85 (85)
75 2qc7_A ERP31, ERP28, endoplasm 99.6 2.4E-14 8.2E-19 81.5 7.9 67 2-68 38-117 (240)
76 3f8u_A Protein disulfide-isome 99.6 2.6E-14 8.9E-19 86.8 8.5 68 2-69 39-108 (481)
77 2c0g_A ERP29 homolog, windbeut 99.6 2.1E-14 7E-19 82.1 7.4 67 2-69 49-131 (248)
78 1wmj_A Thioredoxin H-type; str 99.5 1.7E-15 5.8E-20 78.0 2.5 69 1-69 53-121 (130)
79 3aps_A DNAJ homolog subfamily 99.5 1.4E-14 4.7E-19 74.0 5.7 68 2-69 39-112 (122)
80 2trc_P Phosducin, MEKA, PP33; 99.5 1.8E-14 6E-19 80.9 5.5 66 2-68 138-211 (217)
81 2dbc_A PDCL2, unnamed protein 99.5 5.6E-14 1.9E-18 73.5 7.0 64 2-68 48-119 (135)
82 2dj0_A Thioredoxin-related tra 99.5 3.2E-15 1.1E-19 78.1 1.8 66 1-66 43-117 (137)
83 2r2j_A Thioredoxin domain-cont 99.5 8.4E-14 2.9E-18 82.9 8.0 68 2-69 40-116 (382)
84 3us3_A Calsequestrin-1; calciu 99.5 1.2E-13 4E-18 82.1 8.5 65 4-69 56-123 (367)
85 3idv_A Protein disulfide-isome 99.5 1E-13 3.6E-18 77.4 7.8 67 2-69 165-236 (241)
86 2yj7_A LPBCA thioredoxin; oxid 99.2 1.9E-15 6.6E-20 75.1 0.0 68 2-69 37-106 (106)
87 1sji_A Calsequestrin 2, calseq 99.5 2.3E-13 7.7E-18 80.2 8.3 66 3-69 53-121 (350)
88 2b5e_A Protein disulfide-isome 99.5 3.3E-13 1.1E-17 82.4 9.0 68 2-69 49-121 (504)
89 3dml_A Putative uncharacterize 99.5 1.1E-13 3.7E-18 71.3 5.8 54 16-69 53-109 (116)
90 2fwh_A Thiol:disulfide interch 99.5 1.4E-13 5E-18 71.6 6.2 67 2-68 49-126 (134)
91 2ywm_A Glutaredoxin-like prote 99.5 2.2E-13 7.6E-18 76.0 7.3 67 2-68 43-113 (229)
92 1a8l_A Protein disulfide oxido 99.5 4.8E-13 1.6E-17 74.4 8.3 67 2-68 41-111 (226)
93 3idv_A Protein disulfide-isome 99.5 3.7E-13 1.3E-17 75.2 7.8 67 2-69 50-121 (241)
94 1zma_A Bacterocin transport ac 99.5 6.6E-14 2.3E-18 71.3 4.4 65 2-66 47-117 (118)
95 3fk8_A Disulphide isomerase; A 99.4 3E-13 1E-17 70.0 6.3 68 2-69 47-132 (133)
96 3apo_A DNAJ homolog subfamily 99.4 1.4E-13 5E-18 87.4 5.3 68 2-69 151-220 (780)
97 1a0r_P Phosducin, MEKA, PP33; 99.4 2.5E-13 8.5E-18 77.5 5.7 66 2-68 151-224 (245)
98 3ed3_A Protein disulfide-isome 99.4 1.5E-12 5.2E-17 75.7 9.0 68 2-69 53-141 (298)
99 1wou_A Thioredoxin -related pr 99.4 5.3E-13 1.8E-17 68.6 6.3 66 2-67 49-122 (123)
100 2dj3_A Protein disulfide-isome 99.4 1.5E-13 5E-18 71.1 3.6 68 2-69 43-117 (133)
101 2ywm_A Glutaredoxin-like prote 99.4 1.5E-12 5.3E-17 72.6 7.8 65 2-69 154-219 (229)
102 2kuc_A Putative disulphide-iso 99.4 1.2E-12 4.2E-17 67.3 6.7 68 2-69 45-120 (130)
103 3iv4_A Putative oxidoreductase 99.4 9E-13 3.1E-17 67.5 5.8 63 2-65 42-111 (112)
104 2djj_A PDI, protein disulfide- 99.4 9.9E-13 3.4E-17 66.9 5.1 65 2-69 43-116 (121)
105 1lu4_A Soluble secreted antige 99.3 1.5E-11 5E-16 63.2 8.7 67 2-69 42-135 (136)
106 2hls_A Protein disulfide oxido 99.3 1.1E-11 3.7E-16 70.3 8.8 64 2-69 156-225 (243)
107 2fgx_A Putative thioredoxin; N 99.3 3.6E-12 1.2E-16 64.8 5.8 60 2-65 46-106 (107)
108 1ttz_A Conserved hypothetical 99.3 5E-12 1.7E-16 62.1 5.5 59 2-69 17-76 (87)
109 3q6o_A Sulfhydryl oxidase 1; p 99.3 1E-11 3.5E-16 70.0 7.4 68 2-69 48-126 (244)
110 2lst_A Thioredoxin; structural 99.0 1.9E-13 6.5E-18 70.5 0.0 68 2-69 37-115 (130)
111 1zzo_A RV1677; thioredoxin fol 99.3 5.3E-11 1.8E-15 60.9 9.1 67 2-69 43-134 (136)
112 2b5x_A YKUV protein, TRXY; thi 99.3 3.2E-11 1.1E-15 62.6 8.1 68 2-69 47-144 (148)
113 3apo_A DNAJ homolog subfamily 99.3 5.2E-11 1.8E-15 75.8 9.9 67 2-69 473-541 (780)
114 1ilo_A Conserved hypothetical 99.2 5.3E-11 1.8E-15 56.2 6.8 57 2-65 17-76 (77)
115 3erw_A Sporulation thiol-disul 99.2 1E-10 3.5E-15 60.5 8.1 65 2-66 52-145 (145)
116 3f8u_A Protein disulfide-isome 99.2 2.8E-11 9.6E-16 73.5 6.5 67 2-69 388-460 (481)
117 2lja_A Putative thiol-disulfid 99.2 1.3E-10 4.3E-15 60.9 8.1 68 2-69 48-142 (152)
118 3t58_A Sulfhydryl oxidase 1; o 99.2 4E-11 1.4E-15 74.3 7.0 68 2-69 48-126 (519)
119 2hls_A Protein disulfide oxido 99.2 5.8E-11 2E-15 67.3 7.1 64 2-68 45-115 (243)
120 3ia1_A THIO-disulfide isomeras 99.2 1.4E-10 4.7E-15 60.9 7.7 67 2-69 48-143 (154)
121 2f9s_A Thiol-disulfide oxidore 99.2 1.7E-10 5.8E-15 60.5 7.9 68 2-69 44-137 (151)
122 1z6n_A Hypothetical protein PA 99.2 2.9E-11 1E-15 65.5 4.7 56 2-57 72-131 (167)
123 2ju5_A Thioredoxin disulfide i 99.2 1E-10 3.6E-15 62.1 6.6 67 2-69 66-151 (154)
124 3uem_A Protein disulfide-isome 99.2 7.7E-11 2.6E-15 69.4 6.3 66 2-69 285-356 (361)
125 3or5_A Thiol:disulfide interch 99.2 4.2E-10 1.4E-14 59.5 8.6 68 2-69 52-150 (165)
126 3lor_A Thiol-disulfide isomera 99.2 4.1E-10 1.4E-14 59.3 8.5 68 2-69 49-154 (160)
127 3eyt_A Uncharacterized protein 99.1 7.8E-10 2.7E-14 58.2 8.9 67 3-69 48-151 (158)
128 3raz_A Thioredoxin-related pro 99.1 7.9E-10 2.7E-14 58.0 8.8 68 2-69 42-139 (151)
129 3uem_A Protein disulfide-isome 99.1 4.8E-10 1.6E-14 66.0 8.5 68 2-69 153-229 (361)
130 4evm_A Thioredoxin family prot 99.1 9.7E-10 3.3E-14 56.0 8.7 67 2-68 40-137 (138)
131 3kp8_A Vkorc1/thioredoxin doma 99.1 3.3E-10 1.1E-14 57.2 6.7 55 2-66 30-91 (106)
132 3qcp_A QSOX from trypanosoma b 99.1 1.1E-11 3.8E-16 76.0 1.1 55 2-56 60-125 (470)
133 1hyu_A AHPF, alkyl hydroperoxi 99.1 4.2E-10 1.4E-14 69.4 7.9 63 2-68 135-198 (521)
134 2b5e_A Protein disulfide-isome 99.1 8.7E-11 3E-15 71.8 4.4 66 2-69 394-466 (504)
135 3f9u_A Putative exported cytoc 99.1 1.6E-10 5.5E-15 62.0 4.9 63 7-69 73-165 (172)
136 3gl3_A Putative thiol:disulfid 99.1 1.5E-09 5.1E-14 56.7 8.3 68 2-69 46-141 (152)
137 3hcz_A Possible thiol-disulfid 99.1 6.7E-10 2.3E-14 57.6 6.6 67 2-68 49-144 (148)
138 2h30_A Thioredoxin, peptide me 99.1 2.7E-10 9.3E-15 60.2 4.7 68 2-69 56-155 (164)
139 1kng_A Thiol:disulfide interch 99.0 2.5E-09 8.7E-14 56.0 7.5 67 2-69 60-151 (156)
140 3fkf_A Thiol-disulfide oxidore 99.0 5.6E-09 1.9E-13 54.1 8.7 66 2-69 51-145 (148)
141 2l5o_A Putative thioredoxin; s 99.0 1.9E-09 6.5E-14 56.4 6.8 68 2-69 46-140 (153)
142 1sen_A Thioredoxin-like protei 99.0 5E-11 1.7E-15 64.0 0.5 68 2-69 64-147 (164)
143 2b1k_A Thiol:disulfide interch 99.0 2.4E-09 8.3E-14 56.9 6.1 66 2-69 69-159 (168)
144 2lrn_A Thiol:disulfide interch 99.0 7.6E-09 2.6E-13 54.3 7.8 65 2-68 47-139 (152)
145 3hdc_A Thioredoxin family prot 98.9 1.1E-08 3.7E-13 54.0 7.5 66 2-67 59-149 (158)
146 3kcm_A Thioredoxin family prot 98.9 1.5E-08 5.3E-13 52.9 7.9 68 2-69 46-142 (154)
147 3lwa_A Secreted thiol-disulfid 98.9 1.3E-08 4.3E-13 54.9 6.9 68 2-69 77-180 (183)
148 2ywi_A Hypothetical conserved 98.9 8.7E-09 3E-13 55.9 6.1 68 2-69 64-173 (196)
149 3ha9_A Uncharacterized thiored 98.9 4.6E-08 1.6E-12 51.8 8.9 66 2-69 55-163 (165)
150 3kp9_A Vkorc1/thioredoxin doma 98.9 1.1E-09 3.7E-14 63.9 2.6 60 2-66 215-276 (291)
151 3fw2_A Thiol-disulfide oxidore 98.9 3.6E-08 1.2E-12 51.5 8.2 66 2-69 53-147 (150)
152 1wjk_A C330018D20RIK protein; 98.9 5.8E-09 2E-13 52.0 4.9 51 15-69 43-95 (100)
153 3kh7_A Thiol:disulfide interch 98.8 2.7E-08 9.1E-13 53.6 7.5 65 3-69 77-166 (176)
154 2cvb_A Probable thiol-disulfid 98.8 2.6E-08 9E-13 53.8 7.3 68 2-69 51-158 (188)
155 2hyx_A Protein DIPZ; thioredox 98.8 2.4E-08 8.3E-13 59.4 7.3 68 2-69 100-198 (352)
156 2lrt_A Uncharacterized protein 98.8 6.1E-08 2.1E-12 51.0 7.2 63 2-64 53-142 (152)
157 2k8s_A Thioredoxin; dimer, str 98.7 1.3E-08 4.4E-13 48.6 3.4 56 2-61 18-77 (80)
158 1jfu_A Thiol:disulfide interch 98.7 2.1E-07 7.3E-12 50.1 8.7 68 2-69 78-179 (186)
159 3ira_A Conserved protein; meth 98.7 1.9E-08 6.4E-13 54.8 4.3 45 8-52 66-120 (173)
160 3u5r_E Uncharacterized protein 98.7 1.5E-07 5E-12 52.4 7.2 68 2-69 77-186 (218)
161 3ph9_A Anterior gradient prote 98.7 5.9E-09 2E-13 55.7 1.4 55 2-56 62-120 (151)
162 1ego_A Glutaredoxin; electron 98.7 8.7E-08 3E-12 45.8 5.4 60 2-68 17-82 (85)
163 3eur_A Uncharacterized protein 98.6 1.7E-07 5.8E-12 48.5 6.7 64 2-67 49-142 (142)
164 3ewl_A Uncharacterized conserv 98.6 7.4E-08 2.5E-12 49.7 5.2 65 3-69 46-140 (142)
165 2rli_A SCO2 protein homolog, m 98.6 4.5E-07 1.5E-11 48.1 7.7 67 3-69 46-163 (171)
166 2e7p_A Glutaredoxin; thioredox 98.6 4.1E-08 1.4E-12 49.4 2.7 62 2-68 36-106 (116)
167 3bj5_A Protein disulfide-isome 98.5 1.7E-06 5.9E-11 45.8 8.8 68 2-69 50-126 (147)
168 4f9z_D Endoplasmic reticulum r 98.5 1.9E-06 6.5E-11 48.1 9.3 68 2-69 149-224 (227)
169 1o8x_A Tryparedoxin, TRYX, TXN 98.5 2.8E-07 9.5E-12 47.9 5.6 54 2-55 46-128 (146)
170 4fo5_A Thioredoxin-like protei 98.5 8.8E-07 3E-11 45.8 7.4 64 2-67 50-142 (143)
171 2ggt_A SCO1 protein homolog, m 98.5 4.6E-07 1.6E-11 47.7 6.5 67 3-69 43-160 (164)
172 3drn_A Peroxiredoxin, bacterio 98.5 1E-06 3.4E-11 46.6 7.2 53 3-55 49-129 (161)
173 2ls5_A Uncharacterized protein 97.9 1.5E-08 5.1E-13 53.4 0.0 67 2-68 51-146 (159)
174 1o73_A Tryparedoxin; electron 98.5 5.5E-07 1.9E-11 46.5 6.0 53 2-54 46-127 (144)
175 1i5g_A Tryparedoxin II; electr 98.5 6.8E-07 2.3E-11 46.2 6.3 53 2-54 46-127 (144)
176 3gyk_A 27KDA outer membrane pr 98.5 9.1E-07 3.1E-11 47.3 6.9 39 26-69 133-172 (175)
177 2k6v_A Putative cytochrome C o 98.5 1.2E-06 4E-11 46.4 7.3 68 2-69 54-172 (172)
178 3s9f_A Tryparedoxin; thioredox 98.4 7.7E-07 2.6E-11 47.4 5.8 54 2-55 66-148 (165)
179 1we0_A Alkyl hydroperoxide red 98.3 2.2E-06 7.5E-11 46.3 6.1 66 3-68 51-155 (187)
180 2bmx_A Alkyl hydroperoxidase C 98.3 3.1E-06 1.1E-10 46.1 6.6 67 3-69 65-169 (195)
181 2dlx_A UBX domain-containing p 98.3 7.7E-06 2.6E-10 43.7 7.8 55 15-69 77-135 (153)
182 1zof_A Alkyl hydroperoxide-red 98.3 1.7E-06 5.8E-11 47.2 5.2 67 2-68 52-159 (198)
183 2lus_A Thioredoxion; CR-Trp16, 97.6 9.8E-08 3.4E-12 49.2 0.0 53 2-54 44-126 (143)
184 3gv1_A Disulfide interchange p 98.3 5.6E-07 1.9E-11 47.8 2.7 43 23-69 95-138 (147)
185 2in3_A Hypothetical protein; D 98.3 3.2E-06 1.1E-10 46.5 5.9 44 26-69 165-209 (216)
186 1xvw_A Hypothetical protein RV 98.3 9.3E-06 3.2E-10 42.6 7.5 67 2-68 55-158 (160)
187 3cmi_A Peroxiredoxin HYR1; thi 98.3 3.3E-06 1.1E-10 45.0 5.7 38 32-69 122-167 (171)
188 1r7h_A NRDH-redoxin; thioredox 98.2 9.5E-06 3.3E-10 37.5 6.5 47 15-66 25-74 (75)
189 2vup_A Glutathione peroxidase- 98.2 9.5E-06 3.2E-10 44.0 6.8 67 3-69 67-184 (190)
190 1h75_A Glutaredoxin-like prote 98.2 3.1E-06 1.1E-10 39.9 4.2 50 15-69 25-77 (81)
191 2l4c_A Endoplasmic reticulum r 98.2 3.3E-05 1.1E-09 39.9 8.2 62 3-68 55-122 (124)
192 4f9z_D Endoplasmic reticulum r 98.1 3.5E-05 1.2E-09 43.0 8.2 64 2-69 42-111 (227)
193 1uul_A Tryparedoxin peroxidase 98.1 1.3E-05 4.4E-10 43.9 6.3 66 3-68 56-163 (202)
194 2h01_A 2-Cys peroxiredoxin; th 98.1 2.9E-05 9.8E-10 42.1 7.2 66 3-68 51-157 (192)
195 2p5q_A Glutathione peroxidase 98.1 1.4E-05 4.8E-10 42.1 5.7 68 2-69 50-167 (170)
196 1zye_A Thioredoxin-dependent p 98.1 2.7E-05 9.1E-10 43.4 6.9 66 3-68 76-183 (220)
197 2jsy_A Probable thiol peroxida 98.0 7.7E-05 2.6E-09 39.4 8.1 67 3-69 64-166 (167)
198 1xvq_A Thiol peroxidase; thior 98.0 4.5E-05 1.5E-09 40.8 7.1 64 3-67 64-162 (175)
199 2i81_A 2-Cys peroxiredoxin; st 98.0 5.1E-05 1.8E-09 42.1 7.2 66 3-68 72-178 (213)
200 2v1m_A Glutathione peroxidase; 98.0 4.1E-05 1.4E-09 40.3 6.5 35 35-69 130-166 (169)
201 1kte_A Thioltransferase; redox 98.0 8.2E-06 2.8E-10 40.3 3.3 62 2-67 28-100 (105)
202 1qmv_A Human thioredoxin perox 97.9 5E-05 1.7E-09 41.3 6.5 66 3-68 54-161 (197)
203 1v58_A Thiol:disulfide interch 97.9 1.3E-05 4.3E-10 45.4 4.0 44 25-69 187-232 (241)
204 3dwv_A Glutathione peroxidase- 97.9 0.00011 3.7E-09 39.7 7.5 36 34-69 142-182 (187)
205 1t3b_A Thiol:disulfide interch 97.9 7.2E-06 2.5E-10 45.5 2.7 41 25-69 169-210 (211)
206 2hze_A Glutaredoxin-1; thiored 97.9 3E-06 1E-10 42.8 1.0 48 18-67 49-107 (114)
207 3kzq_A Putative uncharacterize 97.9 3.9E-05 1.3E-09 42.2 5.6 43 27-69 159-202 (208)
208 4dvc_A Thiol:disulfide interch 97.9 2.6E-05 9E-10 41.6 4.5 41 27-69 140-181 (184)
209 1eej_A Thiol:disulfide interch 97.8 1.2E-05 4.3E-10 44.6 3.0 41 24-68 168-209 (216)
210 2p31_A CL683, glutathione pero 97.8 2.7E-05 9.2E-10 41.9 4.2 69 2-70 67-181 (181)
211 3q6o_A Sulfhydryl oxidase 1; p 97.8 0.00013 4.6E-09 40.8 6.8 53 15-68 184-238 (244)
212 2obi_A PHGPX, GPX-4, phospholi 97.7 8.8E-05 3E-09 39.8 5.3 34 36-69 148-183 (183)
213 2f8a_A Glutathione peroxidase 97.7 0.00019 6.4E-09 39.7 6.6 34 36-69 171-206 (208)
214 2b7k_A SCO1 protein; metalloch 97.7 0.00019 6.3E-09 39.3 6.4 41 28-68 119-177 (200)
215 1sji_A Calsequestrin 2, calseq 97.7 0.00027 9.4E-09 41.5 7.3 67 3-69 264-345 (350)
216 3ec3_A Protein disulfide-isome 97.7 0.00081 2.8E-08 38.0 8.9 67 3-69 156-227 (250)
217 2h8l_A Protein disulfide-isome 97.7 0.00029 9.8E-09 39.8 7.0 62 3-68 40-111 (252)
218 2h8l_A Protein disulfide-isome 97.7 0.00013 4.6E-09 41.2 5.5 66 4-69 153-229 (252)
219 3feu_A Putative lipoprotein; a 97.7 7.9E-05 2.7E-09 40.5 4.4 42 26-69 141-183 (185)
220 2gs3_A PHGPX, GPX-4, phospholi 97.7 0.00015 5.2E-09 39.0 5.5 32 38-69 152-185 (185)
221 2a4v_A Peroxiredoxin DOT5; yea 97.6 0.00068 2.3E-08 35.5 7.8 33 26-59 100-140 (159)
222 1xzo_A BSSCO, hypothetical pro 97.6 0.0006 2E-08 35.9 7.5 36 34-69 132-171 (174)
223 3ztl_A Thioredoxin peroxidase; 97.6 0.00045 1.5E-08 38.4 7.1 64 3-66 89-194 (222)
224 3gkn_A Bacterioferritin comigr 97.6 0.00037 1.3E-08 36.5 5.9 66 3-68 55-160 (163)
225 3bci_A Disulfide bond protein 97.5 0.00016 5.5E-09 38.9 4.6 38 27-69 139-177 (186)
226 3h93_A Thiol:disulfide interch 97.5 7E-05 2.4E-09 40.6 3.1 40 28-69 143-183 (192)
227 2lqo_A Putative glutaredoxin R 97.5 0.00067 2.3E-08 33.2 5.8 51 15-69 28-83 (92)
228 3a2v_A Probable peroxiredoxin; 97.5 0.00045 1.5E-08 39.5 5.8 66 3-68 53-160 (249)
229 3gha_A Disulfide bond formatio 97.4 0.00033 1.1E-08 38.6 5.0 38 27-69 153-191 (202)
230 1z6m_A Conserved hypothetical 97.4 0.00022 7.7E-09 37.9 4.2 36 26-66 138-174 (175)
231 2cq9_A GLRX2 protein, glutared 97.4 0.00011 3.6E-09 38.0 2.7 51 16-68 52-113 (130)
232 3ec3_A Protein disulfide-isome 97.4 0.00078 2.7E-08 38.0 6.4 63 3-69 41-114 (250)
233 3ic4_A Glutaredoxin (GRX-1); s 97.4 0.00049 1.7E-08 33.0 4.9 35 27-66 57-91 (92)
234 3kij_A Probable glutathione pe 97.4 0.0005 1.7E-08 36.8 5.0 67 2-68 56-168 (180)
235 3c7m_A Thiol:disulfide interch 97.4 0.00015 5E-09 39.1 2.8 41 27-69 152-193 (195)
236 3us3_A Calsequestrin-1; calciu 97.3 0.00083 2.8E-08 39.9 6.2 67 3-69 266-347 (367)
237 2r2j_A Thioredoxin domain-cont 97.3 0.0012 4.2E-08 39.3 6.7 63 6-69 259-328 (382)
238 3gn3_A Putative protein-disulf 97.3 0.00028 9.6E-09 38.4 3.6 36 28-65 145-181 (182)
239 3gmf_A Protein-disulfide isome 97.3 0.00049 1.7E-08 38.1 4.6 37 28-69 158-196 (205)
240 2znm_A Thiol:disulfide interch 97.2 0.00038 1.3E-08 37.6 3.8 39 27-69 140-179 (195)
241 2ht9_A Glutaredoxin-2; thiored 97.2 0.00018 6.3E-09 37.9 2.3 50 16-67 74-134 (146)
242 2rem_A Disulfide oxidoreductas 97.1 0.00081 2.8E-08 36.2 4.1 39 27-69 145-183 (193)
243 3f4s_A Alpha-DSBA1, putative u 97.1 0.001 3.5E-08 37.3 4.6 43 27-69 160-210 (226)
244 2imf_A HCCA isomerase, 2-hydro 97.0 0.0014 4.7E-08 35.8 4.8 37 27-68 157-194 (203)
245 3ixr_A Bacterioferritin comigr 97.0 0.0053 1.8E-07 32.8 6.7 65 4-68 72-176 (179)
246 2ec4_A FAS-associated factor 1 97.0 0.013 4.5E-07 31.8 9.1 54 15-68 90-166 (178)
247 3c1r_A Glutaredoxin-1; oxidize 97.0 0.00088 3E-08 33.9 3.2 50 16-67 54-114 (118)
248 3hd5_A Thiol:disulfide interch 96.9 0.001 3.4E-08 36.0 3.6 39 28-68 142-182 (195)
249 3ed3_A Protein disulfide-isome 96.9 0.0027 9.3E-08 36.8 5.5 65 3-67 176-264 (298)
250 2yzh_A Probable thiol peroxida 96.8 0.018 6.1E-07 30.3 7.7 41 27-68 114-170 (171)
251 3me7_A Putative uncharacterize 96.8 0.011 3.6E-07 31.4 6.8 35 35-69 124-161 (170)
252 3hz8_A Thiol:disulfide interch 96.8 0.0038 1.3E-07 33.9 5.0 38 27-68 144-181 (193)
253 3t58_A Sulfhydryl oxidase 1; o 96.8 0.0083 2.8E-07 37.5 7.0 60 7-67 173-237 (519)
254 3gl5_A Putative DSBA oxidoredu 96.7 0.0043 1.5E-07 35.0 5.2 39 27-69 173-212 (239)
255 3p7x_A Probable thiol peroxida 96.7 0.012 4.2E-07 30.8 6.8 42 26-67 111-165 (166)
256 1psq_A Probable thiol peroxida 96.7 0.02 7E-07 29.9 8.5 42 26-67 108-162 (163)
257 3fz5_A Possible 2-hydroxychrom 96.7 0.0032 1.1E-07 34.5 4.2 36 27-67 163-199 (202)
258 3l9v_A Putative thiol-disulfid 96.6 0.0039 1.3E-07 33.8 4.4 40 27-68 135-181 (189)
259 3qpm_A Peroxiredoxin; oxidored 96.6 0.016 5.5E-07 32.6 6.9 41 27-67 151-203 (240)
260 3zrd_A Thiol peroxidase; oxido 96.6 0.026 9E-07 30.8 7.5 41 26-66 144-197 (200)
261 1nm3_A Protein HI0572; hybrid, 96.6 0.011 3.9E-07 32.9 6.1 30 27-56 103-143 (241)
262 2klx_A Glutaredoxin; thioredox 96.4 0.0082 2.8E-07 28.4 4.3 34 15-50 30-66 (89)
263 1un2_A DSBA, thiol-disulfide i 96.4 0.0034 1.2E-07 34.5 3.2 29 26-56 39-67 (197)
264 1q98_A Thiol peroxidase, TPX; 96.3 0.038 1.3E-06 28.9 7.1 41 26-66 109-162 (165)
265 3l9s_A Thiol:disulfide interch 96.3 0.0054 1.9E-07 33.4 3.7 28 27-56 141-168 (191)
266 2yan_A Glutaredoxin-3; oxidore 96.3 0.0085 2.9E-07 29.4 4.2 35 15-51 46-84 (105)
267 1n8j_A AHPC, alkyl hydroperoxi 96.3 0.011 3.8E-07 31.8 4.9 42 27-68 101-154 (186)
268 2c0d_A Thioredoxin peroxidase 96.3 0.011 3.7E-07 32.9 4.9 42 27-68 130-182 (221)
269 3qmx_A Glutaredoxin A, glutare 96.2 0.0021 7.3E-08 31.6 1.5 35 15-51 40-79 (99)
270 1r4w_A Glutathione S-transfera 96.1 0.021 7.2E-07 31.6 5.5 40 27-67 172-212 (226)
271 1t4y_A Adaptive-response senso 95.9 0.056 1.9E-06 27.2 7.0 51 16-67 45-96 (105)
272 3ktb_A Arsenical resistance op 95.9 0.062 2.1E-06 27.1 6.1 50 14-66 42-102 (106)
273 3kgk_A Arsenical resistance op 95.7 0.074 2.5E-06 26.9 6.7 49 15-66 40-99 (110)
274 2pn8_A Peroxiredoxin-4; thiore 95.7 0.022 7.4E-07 31.4 4.4 42 27-68 122-175 (211)
275 4g2e_A Peroxiredoxin; redox pr 95.6 0.037 1.3E-06 28.9 5.0 43 26-68 96-156 (157)
276 2i3y_A Epididymal secretory gl 95.6 0.027 9.1E-07 31.3 4.6 31 39-69 178-210 (215)
277 2r37_A Glutathione peroxidase 95.4 0.034 1.2E-06 30.6 4.5 31 39-69 160-192 (207)
278 1fov_A Glutaredoxin 3, GRX3; a 95.3 0.061 2.1E-06 24.6 4.7 34 15-50 25-62 (82)
279 3rpp_A Glutathione S-transfera 95.2 0.059 2E-06 30.2 5.2 40 27-67 172-212 (234)
280 2khp_A Glutaredoxin; thioredox 94.9 0.064 2.2E-06 25.3 4.1 35 15-51 30-68 (92)
281 4gqc_A Thiol peroxidase, perox 94.8 0.13 4.4E-06 27.1 5.5 45 24-68 97-158 (164)
282 3nzn_A Glutaredoxin; structura 94.6 0.16 5.5E-06 24.6 5.5 32 31-66 71-102 (103)
283 3tjj_A Peroxiredoxin-4; thiore 94.6 0.078 2.7E-06 30.2 4.6 41 27-67 165-217 (254)
284 1prx_A HORF6; peroxiredoxin, h 94.4 0.21 7.1E-06 27.8 6.0 42 27-68 108-167 (224)
285 2v2g_A Peroxiredoxin 6; oxidor 94.4 0.12 4.1E-06 29.1 5.0 43 26-68 103-163 (233)
286 3msz_A Glutaredoxin 1; alpha-b 94.2 0.18 6.1E-06 23.3 6.3 33 16-50 31-72 (89)
287 3uma_A Hypothetical peroxiredo 94.2 0.13 4.4E-06 27.8 4.7 41 27-67 127-183 (184)
288 4eo3_A Bacterioferritin comigr 94.1 0.14 4.6E-06 30.2 4.9 44 25-68 85-137 (322)
289 1xcc_A 1-Cys peroxiredoxin; un 94.0 0.15 5.2E-06 28.3 4.9 42 27-68 105-164 (220)
290 2wfc_A Peroxiredoxin 5, PRDX5; 93.8 0.13 4.6E-06 27.2 4.3 31 26-56 101-142 (167)
291 3ctg_A Glutaredoxin-2; reduced 93.7 0.042 1.4E-06 28.1 2.1 34 16-51 66-106 (129)
292 1tp9_A Peroxiredoxin, PRX D (t 93.5 0.16 5.6E-06 26.5 4.2 32 25-56 104-146 (162)
293 4hde_A SCO1/SENC family lipopr 92.9 0.37 1.3E-05 25.4 5.1 32 38-69 134-169 (170)
294 3mng_A Peroxiredoxin-5, mitoch 92.4 0.39 1.3E-05 25.6 4.8 40 27-66 114-171 (173)
295 3keb_A Probable thiol peroxida 91.7 0.96 3.3E-05 25.4 6.0 43 26-68 116-174 (224)
296 1wik_A Thioredoxin-like protei 90.7 0.66 2.3E-05 22.6 4.3 35 15-51 44-82 (109)
297 3fhk_A UPF0403 protein YPHP; d 90.5 0.52 1.8E-05 24.9 3.8 30 36-65 105-139 (147)
298 3rhb_A ATGRXC5, glutaredoxin-C 90.4 0.43 1.5E-05 23.3 3.5 34 16-51 44-85 (113)
299 2axo_A Hypothetical protein AT 90.0 1.2 4E-05 25.9 5.4 38 27-68 102-141 (270)
300 3h8q_A Thioredoxin reductase 3 89.6 0.62 2.1E-05 23.0 3.7 35 15-51 41-82 (114)
301 2pwj_A Mitochondrial peroxired 89.2 0.77 2.6E-05 24.2 4.1 31 26-56 113-154 (171)
302 4g9p_A 4-hydroxy-3-methylbut-2 85.4 4.8 0.00016 24.9 6.9 60 10-69 327-398 (406)
303 2a2p_A Selenoprotein M, SELM p 84.0 2.3 7.8E-05 22.1 3.9 32 37-68 55-89 (129)
304 4f82_A Thioredoxin reductase; 83.0 2.6 8.8E-05 22.8 4.1 31 26-56 117-158 (176)
305 1wwj_A Circadian clock protein 82.3 0.044 1.5E-06 27.6 -2.8 27 16-42 40-66 (105)
306 3ipz_A Monothiol glutaredoxin- 81.5 1.6 5.4E-05 21.4 2.7 51 15-67 47-105 (109)
307 1aba_A Glutaredoxin; electron 80.7 3 0.0001 19.2 3.8 34 15-49 28-75 (87)
308 2a4h_A Selenoprotein SEP15; re 79.8 1.9 6.5E-05 22.3 2.7 34 36-69 60-96 (126)
309 1t1v_A SH3BGRL3, SH3 domain-bi 77.8 4.1 0.00014 19.1 3.5 34 15-50 32-71 (93)
310 2wci_A Glutaredoxin-4; redox-a 77.6 4.3 0.00015 20.8 3.7 34 15-50 64-101 (135)
311 2ct6_A SH3 domain-binding glut 72.7 6.8 0.00023 19.1 3.7 35 15-51 38-84 (111)
312 1m2d_A [2Fe-2S] ferredoxin; th 69.4 6.6 0.00023 19.2 3.1 29 37-69 61-90 (110)
313 3sbc_A Peroxiredoxin TSA1; alp 64.9 16 0.00055 20.4 4.9 42 26-67 125-178 (216)
314 1he7_A High affinity nerve gro 62.6 5.2 0.00018 20.3 2.0 14 38-51 29-42 (126)
315 3zyw_A Glutaredoxin-3; metal b 61.1 9.3 0.00032 18.7 2.7 34 15-50 45-82 (111)
316 3noy_A 4-hydroxy-3-methylbut-2 60.4 19 0.00064 22.0 4.3 55 15-69 301-360 (366)
317 2wem_A Glutaredoxin-related pr 59.4 13 0.00045 18.5 3.1 35 15-51 49-88 (118)
318 3tdg_A DSBG, putative uncharac 57.6 4.3 0.00015 23.6 1.2 21 25-45 243-264 (273)
319 3knb_B Obscurin-like protein 1 49.6 12 0.0004 17.8 2.0 14 38-51 42-55 (107)
320 2k0q_A Putative uncharacterize 49.6 7.9 0.00027 18.0 1.2 15 35-49 12-26 (74)
321 1s3a_A NADH-ubiquinone oxidore 48.4 23 0.0008 17.2 7.0 33 37-69 64-98 (102)
322 3knb_A Titin; IG-like, titin, 48.0 13 0.00045 17.3 2.0 14 38-51 34-47 (100)
323 4hhu_A OR280; engineered prote 47.4 28 0.00095 17.9 3.1 41 27-67 63-103 (170)
324 1wwb_X Protein (brain derived 47.2 17 0.00058 16.9 2.3 14 38-51 30-43 (103)
325 3jr7_A Uncharacterized EGV fam 47.2 41 0.0014 19.6 4.5 44 23-67 30-73 (298)
326 2z8u_A Tata-box-binding protei 47.1 34 0.0012 18.7 3.8 35 32-68 132-178 (188)
327 2lu7_A Obscurin-like protein 1 46.1 6.8 0.00023 17.9 0.7 14 38-51 24-37 (84)
328 2kzf_A RBFA, ribosome-binding 45.7 27 0.00091 17.1 2.9 20 28-47 80-99 (106)
329 1hyu_A AHPF, alkyl hydroperoxi 44.9 54 0.0018 20.3 6.0 33 36-68 60-94 (521)
330 3pl5_A SMU_165, putative uncha 43.8 21 0.00071 21.1 2.7 43 23-66 45-89 (320)
331 3egl_A DEGV family protein; al 42.4 48 0.0016 19.1 4.0 43 23-67 14-56 (277)
332 2dyj_A Ribosome-binding factor 41.5 27 0.00093 16.8 2.5 20 28-47 72-91 (95)
333 2yuz_A Myosin-binding protein 41.1 16 0.00053 17.1 1.6 16 36-51 32-47 (100)
334 1xiy_A Peroxiredoxin, pfaop; a 40.2 43 0.0015 17.9 5.7 30 25-54 112-152 (182)
335 3gx8_A Monothiol glutaredoxin- 39.3 36 0.0012 16.8 4.7 31 18-50 51-85 (121)
336 1jos_A RBFA, ribosome-binding 38.7 32 0.0011 17.5 2.6 19 29-47 82-100 (128)
337 3fys_A Protein DEGV; fatty aci 38.0 34 0.0012 20.2 3.0 41 23-66 45-87 (315)
338 3r08_E T-cell surface glycopro 38.0 18 0.0006 16.9 1.5 17 35-51 23-39 (82)
339 2dt8_A DEGV family protein; fa 37.8 56 0.0019 18.8 3.8 41 23-66 11-53 (280)
340 2e6q_A Obscurin-like protein 1 37.6 9.7 0.00033 18.7 0.5 16 36-51 33-48 (112)
341 1g1c_A Immunoglobulin-like dom 36.9 25 0.00086 15.7 2.0 15 37-51 33-47 (99)
342 2kdg_A Myotilin; immonoglobuli 36.2 32 0.0011 15.4 2.3 15 37-51 33-47 (100)
343 1u6t_A SH3 domain-binding glut 36.2 44 0.0015 16.9 4.2 35 15-51 30-76 (121)
344 3bqa_A Sensor protein PHOQ; hi 35.7 24 0.00081 18.7 1.8 19 37-55 39-59 (148)
345 2lvc_A Obscurin-like protein 1 35.2 10 0.00035 17.6 0.4 14 38-51 34-47 (91)
346 2pb9_A Phosphomethylpyrimidine 34.9 59 0.002 18.0 5.7 63 6-69 108-187 (195)
347 1wwc_A Protein (NT-3 growth fa 34.8 27 0.00093 16.4 2.0 14 37-50 33-46 (118)
348 1pzx_A Hypothetical protein AP 34.7 67 0.0023 18.5 4.0 41 23-66 13-55 (289)
349 2fhm_A Probable acylphosphatas 34.7 40 0.0014 15.9 4.2 38 27-66 22-61 (91)
350 3rbs_A Myomesin-1; immunoglobu 33.3 34 0.0011 18.1 2.3 16 36-51 30-45 (207)
351 4a17_S RPL26, 60S ribosomal pr 33.2 24 0.00083 18.4 1.6 15 25-39 34-48 (135)
352 2g7z_A Conserved hypothetical 33.2 36 0.0012 19.6 2.5 42 23-66 15-57 (282)
353 1waa_A Titin; metal binding pr 33.2 17 0.00059 16.7 1.0 13 39-51 34-46 (93)
354 2e7g_A Putative ribosome-bindi 33.0 30 0.001 17.6 2.0 19 29-47 89-107 (129)
355 3l4n_A Monothiol glutaredoxin- 32.8 44 0.0015 16.8 2.6 20 29-50 62-81 (127)
356 3qp3_A Titin; I-SET IG-like, s 32.6 32 0.0011 15.5 2.0 14 37-50 36-49 (103)
357 3u5e_Y L33, YL33, 60S ribosoma 32.2 26 0.00088 18.1 1.6 15 25-39 35-49 (127)
358 3nyi_A FAT acid-binding protei 31.9 38 0.0013 19.7 2.5 43 23-67 13-57 (297)
359 1u2h_A APEG-1, aortic preferen 31.5 35 0.0012 15.2 2.0 14 38-51 34-47 (99)
360 3puc_A Titin; I-SET IG-like do 30.7 36 0.0012 15.1 2.0 13 38-50 35-47 (99)
361 3eik_A Tata-box-binding protei 30.6 53 0.0018 18.5 2.8 27 40-68 90-117 (218)
362 1mp9_A Tata-binding protein; t 30.3 73 0.0025 17.6 3.7 27 40-68 60-87 (198)
363 2e7c_A Myosin-binding protein 30.0 37 0.0013 15.9 2.0 15 37-51 52-66 (118)
364 2gv1_A Probable acylphosphatas 30.0 50 0.0017 15.6 4.6 37 27-65 24-62 (92)
365 3bfo_A Mucosa-associated lymph 29.5 39 0.0013 14.9 2.0 14 37-50 31-44 (91)
366 1ulr_A Putative acylphosphatas 29.3 51 0.0017 15.4 4.6 38 27-66 22-61 (88)
367 1w2i_A Acylphosphatase; hydrol 29.2 52 0.0018 15.5 3.2 28 27-56 24-51 (91)
368 2bjd_A Acylphosphatase; hypert 29.0 56 0.0019 15.8 3.8 37 27-65 34-72 (101)
369 1d4b_A CIDE B, human cell deat 28.5 48 0.0017 17.0 2.2 24 28-51 62-85 (122)
370 1rm1_A Tata-box binding protei 28.2 77 0.0026 18.1 3.2 35 32-68 93-139 (240)
371 2cqv_A MLCK, myosin light chai 28.1 30 0.001 16.1 1.4 14 37-50 35-48 (114)
372 3caf_A Fibroblast growth facto 27.6 44 0.0015 14.9 2.0 15 37-51 36-50 (100)
373 2bk8_A Connectin, M1, titin he 27.4 45 0.0015 14.9 2.0 14 37-50 30-43 (97)
374 4hwu_A Fibroblast growth facto 27.3 50 0.0017 14.7 2.9 15 37-51 27-41 (95)
375 1urr_A CG18505 protein; acylph 27.2 61 0.0021 15.6 3.8 38 27-66 31-70 (102)
376 2v9t_A Roundabout homolog 1; s 27.1 44 0.0015 15.5 2.0 15 37-51 37-51 (117)
377 2edj_A Roundabout homolog 2; K 26.8 50 0.0017 14.7 2.1 15 37-51 36-50 (100)
378 2vh7_A Acylphosphatase-1; hydr 26.5 62 0.0021 15.5 3.7 38 27-66 28-67 (99)
379 3irg_A Titin; IG-like, titin, 26.2 48 0.0017 14.6 2.0 13 38-50 34-46 (100)
380 3irg_B Obscurin-like protein 1 25.6 50 0.0017 14.9 2.0 14 37-50 41-54 (107)
381 2l82_A Designed protein OR32; 25.1 76 0.0026 16.1 3.8 44 4-47 66-113 (162)
382 1aps_A Acylphosphatase; hydrol 24.9 67 0.0023 15.3 2.4 37 27-66 27-63 (98)
383 2yuv_A Myosin-binding protein 24.7 32 0.0011 15.6 1.1 14 37-50 35-48 (100)
384 3s99_A Basic membrane lipoprot 24.5 75 0.0026 18.9 2.9 22 3-24 98-119 (356)
385 2cr6_A KIAA1556 protein, obscu 24.5 31 0.0011 16.2 1.1 15 37-51 41-55 (115)
386 2eo1_A OBSCN protein, cDNA FLJ 24.4 31 0.0011 15.6 1.1 14 37-50 38-51 (102)
387 1x44_A Myosin-binding protein 24.3 31 0.001 15.7 1.0 12 39-50 36-47 (103)
388 2lxf_A Uncharacterized protein 24.0 81 0.0028 16.0 2.6 36 27-66 54-93 (121)
389 2edk_A Myosin-binding protein 23.9 23 0.00079 16.1 0.5 13 39-51 37-49 (101)
390 2dm2_A Palladin; beta-sandwich 23.4 38 0.0013 15.6 1.3 14 38-51 37-50 (110)
391 2fki_A Protein YJBR; NESG, GFT 23.4 31 0.0011 17.3 1.0 43 24-68 55-99 (126)
392 1jbj_A CD3 epsilon and gamma e 23.3 44 0.0015 17.1 1.6 14 38-51 133-146 (186)
393 2jsx_A Protein NAPD; TAT, proo 23.0 75 0.0026 15.2 6.0 47 20-68 13-63 (95)
394 1pd6_A Cardiac MYBP-C;, myosin 22.9 37 0.0013 15.8 1.2 16 36-51 42-57 (104)
395 2gmq_A Hypothetical protein EF 22.8 81 0.0028 15.6 2.8 17 34-50 57-73 (118)
396 1gsm_A Madcam-1, mucosal addre 22.3 48 0.0016 18.2 1.7 13 39-51 129-141 (210)
397 1fhg_A Telokin; immunoglobulin 22.2 60 0.002 16.1 2.0 13 38-50 70-82 (154)
398 2ckn_A Basic fibroblast growth 22.0 44 0.0015 14.9 1.3 12 39-50 38-49 (95)
399 2v2f_A Penicillin binding prot 21.7 41 0.0014 11.7 1.9 17 37-53 4-20 (26)
400 1hng_A CD2; T lymphocyte adhes 21.6 92 0.0032 15.8 2.7 13 39-51 125-137 (176)
401 1pa4_A Probable ribosome-bindi 21.5 34 0.0011 17.0 0.9 20 28-47 76-95 (116)
402 2eo9_A Roundabout homolog 1; b 21.3 47 0.0016 15.5 1.4 14 38-51 37-50 (118)
403 1txj_A Translationally control 21.1 67 0.0023 17.4 2.0 14 37-50 155-168 (171)
404 2a1v_A Conserved hypothetical 21.0 23 0.00079 18.4 0.2 44 24-67 66-110 (144)
405 3trg_A Acylphosphatase; fatty 20.8 85 0.0029 15.1 3.7 37 27-66 32-68 (98)
406 2r2c_A 28 kDa outer membrane p 20.8 21 0.00071 19.3 0.0 24 25-48 4-28 (183)
407 3c65_A Uvrabc system protein C 20.7 36 0.0012 19.2 1.0 45 20-67 16-70 (226)
408 1yz1_A Translationally control 20.7 58 0.002 17.7 1.7 14 37-50 158-171 (174)
409 3hs2_A PHD protein, prevent HO 20.7 47 0.0016 14.1 1.2 28 36-64 22-50 (58)
410 2k1m_A Myosin-binding protein 20.6 39 0.0013 15.1 1.0 15 37-51 35-49 (95)
411 3f1j_A Matrix protein, GP18, P 20.5 53 0.0018 16.5 1.5 14 31-44 12-25 (142)
412 3kdv_A DDRB, DNA damage respon 20.4 21 0.00073 19.3 0.0 20 37-56 130-149 (184)
413 2kkq_A Myotilin; unknown funct 20.4 72 0.0025 15.0 2.0 15 37-51 43-57 (116)
414 2cr3_A Basic fibroblast growth 20.2 53 0.0018 14.8 1.4 12 39-50 32-43 (99)
415 1h6q_A TCTP, P23FYP, translati 20.0 65 0.0022 17.4 1.8 15 36-50 151-165 (168)
No 1
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.89 E-value=1.3e-22 Score=107.21 Aligned_cols=68 Identities=16% Similarity=0.312 Sum_probs=64.7
Q ss_pred chHHHHHHHhhCCC-cEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPD-VVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~-i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
|.|++++++++|++ ++|++||.|++++++.+|+|+++||+++|++|+.+.+..|. +.++|.++|++++
T Consensus 53 iaPvleela~e~~~~v~~~KVdvDe~~~la~~ygV~siPTlilFkdG~~v~~~vG~~~k~~l~~~l~~~l 122 (137)
T 2qsi_A 53 LAVVLPELINAFPGRLVAAEVAAEAERGLMARFGVAVCPSLAVVQPERTLGVIAKIQDWSSYLAQIGAML 122 (137)
T ss_dssp HHHHHHHHHHTSTTTEEEEEECGGGHHHHHHHHTCCSSSEEEEEECCEEEEEEESCCCHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHccCCcEEEEEECCCCHHHHHHcCCccCCEEEEEECCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 68999999999975 99999999999999999999999999999999999999999 9999999998764
No 2
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.88 E-value=1.9e-22 Score=106.98 Aligned_cols=68 Identities=21% Similarity=0.256 Sum_probs=64.7
Q ss_pred chHHHHHHHhhCC-C-cEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFP-D-VVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~-~-i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
|+|++++++++|+ . ++|++||+|++++++.+|+|+++||+++|++|+.+.+..|. +.++|.++|++++
T Consensus 54 iaPvleela~e~~g~~v~~~KVdvDe~~~lA~~ygV~sIPTlilFk~G~~v~~~~G~~~k~~l~~~i~~~l 124 (140)
T 2qgv_A 54 NPVMIGELLHEFPDYTWQVAIADLEQSEAIGDRFGAFRFPATLVFTGGNYRGVLNGIHPWAELINLMRGLV 124 (140)
T ss_dssp HHHHHHHHHTTCTTSCCEEEECCHHHHHHHHHHHTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHcCCCeEEEEEEECCCCHHHHHHcCCccCCEEEEEECCEEEEEEecCCCHHHHHHHHHHHh
Confidence 7899999999996 5 99999999999999999999999999999999999999999 9999999998765
No 3
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.85 E-value=1.7e-20 Score=95.25 Aligned_cols=67 Identities=52% Similarity=0.754 Sum_probs=64.4
Q ss_pred chHHHHHHHhhCCCcEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCCCHHHHHHHHHhh
Q psy11066 2 SLVMLQELASEFPDVVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGANFDKLRSTVLAN 68 (70)
Q Consensus 2 ~~p~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~l~~~i~~~ 68 (70)
|.|.++++++.++++.|++||++++++++++|+|+++||+++|++|+.+.++.|.+.++|.++|+++
T Consensus 38 ~~p~~~~~~~~~~~~~~~~vd~d~~~~l~~~~~V~~~PT~~~~~~G~~v~~~~G~~~~~l~~~i~k~ 104 (105)
T 3zzx_A 38 IAPKLEELSQSMSDVVFLKVDVDECEDIAQDNQIACMPTFLFMKNGQKLDSLSGANYDKLLELVEKN 104 (105)
T ss_dssp HHHHHHHHHHHCTTEEEEEEETTTCHHHHHHTTCCBSSEEEEEETTEEEEEEESCCHHHHHHHHHHH
T ss_pred CCcchhhhhhccCCeEEEEEecccCHHHHHHcCCCeecEEEEEECCEEEEEEeCcCHHHHHHHHHhc
Confidence 6899999999999999999999999999999999999999999999999999999999999999876
No 4
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.80 E-value=1.7e-19 Score=97.07 Aligned_cols=69 Identities=16% Similarity=0.219 Sum_probs=63.7
Q ss_pred CchHHHHHHHhhCCC-cEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEE--e-------eeeCC-C-HHHHHHHHHhh
Q psy11066 1 MSLVMLQELASEFPD-VVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKV--E-------QFSGA-N-FDKLRSTVLAN 68 (70)
Q Consensus 1 ~~~p~~~~~~~~~~~-i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~--~-------~~~g~-~-~~~l~~~i~~~ 68 (70)
+|.|+|+++++++++ +.|++||+|++++++++|+|.++||+++|++|+.+ + ++.|. + .++|.++|+.+
T Consensus 58 ~m~PvleelA~e~~~~v~f~kVDVDe~~e~a~~y~V~siPT~~fFk~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~ 137 (160)
T 2av4_A 58 KMDELLYKVADDIKNFCVIYLVDITEVPDFNTMYELYDPVSVMFFYRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETI 137 (160)
T ss_dssp HHHHHHHHHHHHHTTTEEEEEEETTTCCTTTTTTTCCSSEEEEEEETTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCCcEEEEEECCCCHHHHHHcCCCCCCEEEEEECCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHH
Confidence 478999999999976 99999999999999999999999999999999998 5 89999 6 89999999876
Q ss_pred c
Q psy11066 69 R 69 (70)
Q Consensus 69 ~ 69 (70)
+
T Consensus 138 ~ 138 (160)
T 2av4_A 138 F 138 (160)
T ss_dssp H
T ss_pred H
Confidence 4
No 5
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.78 E-value=4.3e-19 Score=94.20 Aligned_cols=69 Identities=22% Similarity=0.329 Sum_probs=60.4
Q ss_pred CchHHHHHHHhhCCCcE--EEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 1 MSLVMLQELASEFPDVV--FLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 1 ~~~p~~~~~~~~~~~i~--~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
+|.|.|++++++++++. |++||++++++++++|+|+++||+++|++|+.+.++.|. +.+.|.++|++++
T Consensus 53 ~l~P~l~~la~~~~~v~~~~~~Vd~d~~~~la~~~~V~~iPT~~~fk~G~~v~~~~G~~~~~~l~~~i~~~l 124 (142)
T 2es7_A 53 DNPVMIAELLREFPQFDWQVAVADLEQSEAIGDRFNVRRFPATLVFTDGKLRGALSGIHPWAELLTLMRSIV 124 (142)
T ss_dssp CHHHHHHHHHHTCTTSCCEEEEECHHHHHHHHHTTTCCSSSEEEEESCC----CEESCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccceeEEEEECCCCHHHHHhcCCCcCCeEEEEeCCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 47899999999995588 999999999999999999999999999999999999999 9999999998765
No 6
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.76 E-value=7.7e-18 Score=84.58 Aligned_cols=68 Identities=15% Similarity=0.198 Sum_probs=55.8
Q ss_pred chHHHHHHHhhCCCcEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPDVVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
+.|.+++++++++++.++.+|++++++++++|+|.++||+++|++|+.+.++.|. +.+.|.++|++++
T Consensus 36 ~~p~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~g~~~~~~l~~~l~~~~ 104 (105)
T 4euy_A 36 MLRKVNYVLENYNYVEKIEILLQDMQEIAGRYAVFTGPTVLLFYNGKEILRESRFISLENLERTIQLFE 104 (105)
T ss_dssp HHHHHHHHHHTCTTEEEEEEEECCC---------CCCCEEEEEETTEEEEEEESSCCHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCCceEEEEECCCCHHHHHhcCCCCCCEEEEEeCCeEEEEEeCCcCHHHHHHHHHHhh
Confidence 6799999999998899999999999999999999999999999999999999999 9999999999875
No 7
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.74 E-value=7.6e-17 Score=81.56 Aligned_cols=68 Identities=31% Similarity=0.556 Sum_probs=64.1
Q ss_pred chHHHHHHHhhCCCcEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCCCHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPDVVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGANFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~l~~~i~~~~ 69 (70)
+.|.+++++++++++.|+.+|++++++++++|+|.++||+++|++|+.+.++.|.+.+.|.++|++++
T Consensus 42 ~~p~l~~l~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~l~~~i~~~l 109 (109)
T 3f3q_A 42 IAPMIEKFSEQYPQADFYKLDVDELGDVAQKNEVSAMPTLLLFKNGKEVAKVVGANPAAIKQAIAANA 109 (109)
T ss_dssp HHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEEESSCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCCCEEEEEECCCCHHHHHHcCCCccCEEEEEECCEEEEEEeCCCHHHHHHHHHhhC
Confidence 67999999999988999999999999999999999999999999999999999997799999998864
No 8
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.74 E-value=8.3e-17 Score=80.85 Aligned_cols=68 Identities=26% Similarity=0.536 Sum_probs=62.9
Q ss_pred chHHHHHHHhhCCCcEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCCCHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPDVVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGANFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~l~~~i~~~~ 69 (70)
+.|.+++++++++++.|+.+|++++++++++|++.++||+++|++|+.+.++.|.+.++|.++|++++
T Consensus 39 ~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~l~~~l~~~l 106 (107)
T 1gh2_A 39 IAPAFSSMSNKYPQAVFLEVDVHQCQGTAATNNISATPTFQFFRNKVRIDQYQGADAVGLEEKIKQHL 106 (107)
T ss_dssp HHHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTCCSSSEEEEEETTEEEEEEESSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCcEEEEEECccCHHHHHhcCCCcccEEEEEECCeEEEEEeCCCHHHHHHHHHHhc
Confidence 57899999999988999999999999999999999999999999999999999995566999998875
No 9
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.74 E-value=6.2e-17 Score=82.73 Aligned_cols=68 Identities=40% Similarity=0.655 Sum_probs=64.1
Q ss_pred chHHHHHHHhhCCCcEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCCCHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPDVVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGANFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~l~~~i~~~~ 69 (70)
+.|.+++++++++++.|+.+|++++++++++|+|.++||+++|++|+.+.++.|.+.+.|.++|++++
T Consensus 49 ~~p~l~~l~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~l~~~l~~~l 116 (116)
T 3qfa_C 49 IKPFFHSLSEKYSNVIFLEVDVDDCQDVASECEVKSMPTFQFFKKGQKVGEFSGANKEKLEATINELV 116 (116)
T ss_dssp HHHHHHHHHTTCTTSEEEEEETTTTHHHHHHTTCCSSSEEEEESSSSEEEEEESCCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCCCEEEEEECCCCHHHHHHcCCccccEEEEEeCCeEEEEEcCCCHHHHHHHHHHhC
Confidence 67999999999988999999999999999999999999999999999999999999999999998764
No 10
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.73 E-value=8.9e-17 Score=80.87 Aligned_cols=68 Identities=18% Similarity=0.354 Sum_probs=64.4
Q ss_pred chHHHHHHHhhCCC-cEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPD-VVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~-i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
+.|.++++++++++ +.|+.+|++++++++++|+|.++||+++|++|+.+.++.|. +.+.|.++|++++
T Consensus 40 ~~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~l~~~l 109 (111)
T 3gnj_A 40 VTPVLEELRLNYEESFGFYYVDVEEEKTLFQRFSLKGVPQILYFKDGEYKGKMAGDVEDDEVEQMIADVL 109 (111)
T ss_dssp HHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTCCSSCEEEEEETTEEEEEEESSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCceEEEEEECCcChhHHHhcCCCcCCEEEEEECCEEEEEEeccCCHHHHHHHHHHHh
Confidence 67899999999986 99999999999999999999999999999999999999999 9999999998875
No 11
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.72 E-value=1.8e-16 Score=79.06 Aligned_cols=68 Identities=40% Similarity=0.648 Sum_probs=64.1
Q ss_pred chHHHHHHHhhCCCcEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCCCHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPDVVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGANFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~l~~~i~~~~ 69 (70)
+.|.+++++++++++.++.+|++++++++++|++.++||+++|++|+.+.++.|.+.+.|.++|++++
T Consensus 38 ~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~l~~~l~~~l 105 (105)
T 3m9j_A 38 IKPFFHSLSEKYSNVIFLEVDVDDCQDVASESEVKSMPTFQFFKKGQKVGEFSGANKEKLEATINELV 105 (105)
T ss_dssp HHHHHHHHHHHSTTSEEEEEETTTCHHHHHHTTCCBSSEEEEEETTEEEEEEESSCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHccCeEEEEEEhhhhHHHHHHcCCCcCcEEEEEECCeEEEEEeCCCHHHHHHHHHHhC
Confidence 57899999999988999999999999999999999999999999999999999999999999998764
No 12
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.72 E-value=1.8e-16 Score=79.08 Aligned_cols=68 Identities=28% Similarity=0.445 Sum_probs=64.0
Q ss_pred chHHHHHHHhhCCC-cEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPD-VVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~-i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
+.|.++++++++++ +.++.+|++++++++++|++.++||+++|++|+.+.++.|. +.++|.++|++++
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~g~~~~~~l~~~l~~~l 106 (106)
T 3die_A 37 IAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL 106 (106)
T ss_dssp HHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSBSEEEEEETTEEEEEEESCCCHHHHHHHHHTTC
T ss_pred HhHHHHHHHHHhcCCcEEEEEECCcCHHHHHhCCCcccCEEEEEeCCeEEEEEeCCCCHHHHHHHHHHhC
Confidence 57899999999987 99999999999999999999999999999999999999999 9999999998764
No 13
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.72 E-value=2.6e-16 Score=78.78 Aligned_cols=68 Identities=28% Similarity=0.411 Sum_probs=64.3
Q ss_pred chHHHHHHHhhCCC-cEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPD-VVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~-i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
+.|.++++++.+++ +.++.+|++++++++++|++.++||+++|++|+.+.++.|. +.+.|.++|++++
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~l~~~l 108 (109)
T 3tco_A 39 YEPIYKKVAEKYKGKAVFGRLNVDENQKIADKYSVLNIPTTLIFVNGQLVDSLVGAVDEDTLESTVNKYL 108 (109)
T ss_dssp HHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHhCCCceEEEEccccCHHHHHhcCcccCCEEEEEcCCcEEEeeeccCCHHHHHHHHHHHh
Confidence 57899999999985 99999999999999999999999999999999999999999 9999999999876
No 14
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.72 E-value=2.1e-16 Score=79.25 Aligned_cols=69 Identities=25% Similarity=0.392 Sum_probs=64.2
Q ss_pred chHHHHHHHhhCCC-cEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhcC
Q psy11066 2 SLVMLQELASEFPD-VVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANRS 70 (70)
Q Consensus 2 ~~p~~~~~~~~~~~-i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~~ 70 (70)
+.|.++++++++++ +.++.+|++++++++++|++.++||+++|++|+.+.++.|. +.+.|.++|+++++
T Consensus 38 ~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~ 108 (108)
T 2trx_A 38 IAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLA 108 (108)
T ss_dssp HHHHHHHHHHHTTTTEEEEEEETTTCTTHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCCcccCEEEEEeCCEEEEEEecCCCHHHHHHHHHHhhC
Confidence 57899999999975 99999999999999999999999999999999999999999 99999999998763
No 15
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.71 E-value=1.3e-16 Score=85.35 Aligned_cols=68 Identities=19% Similarity=0.265 Sum_probs=64.0
Q ss_pred chHHHHHHHhhCCC-cEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPD-VVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~-i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
+.|.|+++++++++ +.|+.+|++++++++++|+|.++||+++|++|+.+.++.|. +.++|.+||++++
T Consensus 82 ~~p~l~~la~~~~~~v~~~~vd~~~~~~l~~~~~i~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 151 (155)
T 2ppt_A 82 MAPQFQAAAATLAGQVRLAKIDTQAHPAVAGRHRIQGIPAFILFHKGRELARAAGARPASELVGFVRGKL 151 (155)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEETTTSTHHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCCEEEEEEeCCccHHHHHHcCCCcCCEEEEEeCCeEEEEecCCCCHHHHHHHHHHHh
Confidence 67999999999874 99999999999999999999999999999999999999999 9999999999875
No 16
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.71 E-value=3.6e-16 Score=80.77 Aligned_cols=69 Identities=36% Similarity=0.628 Sum_probs=64.4
Q ss_pred chHHHHHHHhhCCCcEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCCCHHHHHHHHHhhcC
Q psy11066 2 SLVMLQELASEFPDVVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGANFDKLRSTVLANRS 70 (70)
Q Consensus 2 ~~p~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~l~~~i~~~~~ 70 (70)
+.|.+++++++++++.|+.+|++++++++++|+|.++||++++++|+.+.++.|.+.+.|.++|+++++
T Consensus 56 ~~~~l~~l~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~l~~~l~~~l~ 124 (124)
T 1xfl_A 56 IAPFFADLAKKLPNVLFLKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIAKHLA 124 (124)
T ss_dssp HHHHHHHHHHHCSSEEEEEEETTTSHHHHHHTTCCSSSEEEEEETTEEEEEEESCCHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHCCCcEEEEEECccCHHHHHHcCCCccCEEEEEECCEEEEEEeCCCHHHHHHHHHHhcC
Confidence 578999999999889999999999999999999999999999999999999999988899999998763
No 17
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.71 E-value=1.6e-16 Score=80.51 Aligned_cols=68 Identities=21% Similarity=0.359 Sum_probs=63.5
Q ss_pred chHHHHHHHhhCCCcEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPDVVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
+.|.++++++.++++.++.+|++++++++++|++.++||+++|++|+.+.++.|. +.++|.+++..+.
T Consensus 37 ~~~~l~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~v~~~~G~~~~~~l~~~~~~~~ 105 (110)
T 2l6c_A 37 MEKVLDKFGARAPQVAISSVDSEARPELMKELGFERVPTLVFIRDGKVAKVFSGIMNPRELQALYASIH 105 (110)
T ss_dssp HHHHHHHHHTTCTTSCEEEEEGGGCHHHHHHTTCCSSCEEEEEESSSEEEEEESCCCHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHCCCcEEEEEcCcCCHHHHHHcCCcccCEEEEEECCEEEEEEcCCCCHHHHHHHHHHHh
Confidence 5789999999998899999999999999999999999999999999999999998 9999999998764
No 18
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.71 E-value=4e-17 Score=84.41 Aligned_cols=70 Identities=26% Similarity=0.407 Sum_probs=59.6
Q ss_pred CchHHHHHHHhhCCC-cEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhcC
Q psy11066 1 MSLVMLQELASEFPD-VVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANRS 70 (70)
Q Consensus 1 ~~~p~~~~~~~~~~~-i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~~ 70 (70)
++.|.++++++++++ +.++.+|++++++++++|+|.++||+++|++|+.+.++.|. +.++|.++|+++++
T Consensus 52 ~~~p~~~~l~~~~~~~~~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~ 123 (123)
T 1oaz_A 52 MIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLA 123 (123)
T ss_dssp TTHHHHTTC-------CEEEEEETTSCTTTGGGGTCCBSSEEEEEESSSEEEEEESCCCHHHHHHHHTTTCC
T ss_pred HHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCCccCEEEEEECCEEEEEEeCCCCHHHHHHHHHHHhC
Confidence 367899999999875 99999999999999999999999999999999999999999 99999999988763
No 19
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.70 E-value=4e-16 Score=80.86 Aligned_cols=68 Identities=29% Similarity=0.426 Sum_probs=63.6
Q ss_pred chHHHHHHHhhCCCcEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCCCHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPDVVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGANFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~l~~~i~~~~ 69 (70)
+.|.+++++++++++.|+.+|++++++++++|+|.++||+++|++|+.+.++.|.+.+.|.++|++++
T Consensus 55 ~~p~l~~l~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~i~~~G~~~~~~~G~~~~~l~~~l~~~l 122 (125)
T 1r26_A 55 IERPMEKIAYEFPTVKFAKVDADNNSEIVSKCRVLQLPTFIIARSGKMLGHVIGANPGMLRQKLRDII 122 (125)
T ss_dssp THHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEEESSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEEEECCCCHHHHHHcCCCcccEEEEEeCCeEEEEEeCCCHHHHHHHHHHHh
Confidence 67899999999988999999999999999999999999999999999999999998889999998765
No 20
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.70 E-value=7.6e-17 Score=83.32 Aligned_cols=65 Identities=23% Similarity=0.350 Sum_probs=58.5
Q ss_pred CchHHHHHHHhhCCCcEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC--------CHHHHHHHHHhh
Q psy11066 1 MSLVMLQELASEFPDVVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA--------NFDKLRSTVLAN 68 (70)
Q Consensus 1 ~~~p~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~--------~~~~l~~~i~~~ 68 (70)
+|.|.+++++++|++++|+++|++++ +++|+|+++||+++|++|+.+.++.|. +.+.|+.+|.++
T Consensus 40 ~~~p~l~~la~~~~~v~f~kvd~d~~---~~~~~v~~~PT~~~fk~G~~v~~~~G~~~~gg~~~~~~~le~~L~~~ 112 (118)
T 3evi_A 40 LVNQHLSLLARKFPETKFVKAIVNSC---IQHYHDNCLPTIFVYKNGQIEAKFIGIIECGGINLKLEELEWKLAEV 112 (118)
T ss_dssp HHHHHHHHHHHHCTTSEEEEEEGGGT---STTCCGGGCSEEEEEETTEEEEEEESTTTTTCSSCCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHCCCCEEEEEEhHHh---HHHCCCCCCCEEEEEECCEEEEEEeChhhhCCCCCCHHHHHHHHHHc
Confidence 37899999999999999999999986 689999999999999999999999986 367888888764
No 21
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.70 E-value=1.7e-16 Score=80.44 Aligned_cols=68 Identities=31% Similarity=0.428 Sum_probs=63.4
Q ss_pred chHHHHHHHhhCCC-cEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPD-VVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~-i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
+.|.++++++++++ +.++.+|++++++++++|+|.++||+++|++|+.+.++.|. +.+.|.+++.+++
T Consensus 35 ~~~~l~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~~ 104 (112)
T 2voc_A 35 IAPVLEELDQEMGDKLKIVKIDVDENQETAGKYGVMSIPTLLVLKDGEVVETSVGFKPKEALQELVNKHL 104 (112)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEETTTCCSHHHHTTCCSBSEEEEEETTEEEEEEESCCCHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHhCCCcEEEEEECCCCHHHHHHcCCCcccEEEEEeCCEEEEEEeCCCCHHHHHHHHHHHH
Confidence 57899999999864 99999999999999999999999999999999999999999 9999999998765
No 22
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.70 E-value=3.8e-16 Score=77.95 Aligned_cols=68 Identities=26% Similarity=0.408 Sum_probs=63.5
Q ss_pred chHHHHHHHhhCCC-cEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPD-VVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~-i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
+.|.++++++++++ +.++.+|++++++++++|++.++||++++++|+.+.++.|. +.+.|.++|++++
T Consensus 35 ~~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 104 (105)
T 1nsw_A 35 MAPVLEEFAEAHADKVTVAKLNVDENPETTSQFGIMSIPTLILFKGGRPVKQLIGYQPKEQLEAQLADVL 104 (105)
T ss_dssp HHHHHHHHHHHSTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHTTTTT
T ss_pred HHHHHHHHHHHhcCCcEEEEEECcCCHHHHHHcCCccccEEEEEeCCeEEEEEecCCCHHHHHHHHHHHh
Confidence 57889999999976 99999999999999999999999999999999999999999 9999999998775
No 23
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.70 E-value=4.9e-16 Score=78.39 Aligned_cols=68 Identities=21% Similarity=0.310 Sum_probs=63.4
Q ss_pred chHHHHHHHhhCCC-cEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPD-VVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~-i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
+.|.++++++++++ +.++.+|++++++++++|++.++||++++++|+.+.++.|. +.+.|.++|++++
T Consensus 41 ~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 110 (112)
T 1t00_A 41 IAPSLEAIAAEYGDKIEIVKLNIDENPGTAAKYGVMSIPTLNVYQGGEVAKTIVGAKPKAAIVRDLEDFI 110 (112)
T ss_dssp HHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHTHHHH
T ss_pred cCHHHHHHHHHhcCCeEEEEEEcCCCHHHHHhCCCCcccEEEEEeCCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 56889999999965 99999999999999999999999999999999999999999 8999999998875
No 24
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.70 E-value=7.1e-16 Score=76.67 Aligned_cols=68 Identities=46% Similarity=0.748 Sum_probs=63.3
Q ss_pred chHHHHHHHhhCCCcEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCCCHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPDVVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGANFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~l~~~i~~~~ 69 (70)
+.|.+++++++++++.++.+|++++++++++|++.++||++++++|+.+.++.|.+.++|.++|++++
T Consensus 37 ~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~G~~~~~l~~~l~~~l 104 (104)
T 2vim_A 37 IAPKVEALAKEIPEVEFAKVDVDQNEEAAAKYSVTAMPTFVFIKDGKEVDRFSGANETKLRETITRHK 104 (104)
T ss_dssp HHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEEESSCHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHCCCCEEEEEeccCCHHHHHHcCCccccEEEEEeCCcEEEEEeCCCHHHHHHHHHhhC
Confidence 56889999999988999999999999999999999999999999999999999998889999998764
No 25
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.70 E-value=7.6e-16 Score=76.31 Aligned_cols=68 Identities=31% Similarity=0.517 Sum_probs=63.9
Q ss_pred chHHHHHHHhhCCCcEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPDVVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
+.|.+++++++++++.++.+|++++++++++|++.++||+++|++|+.+.++.|. +.+.+.++|++++
T Consensus 34 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~l~~~l 102 (104)
T 2e0q_A 34 LAPIIEELAEDYPQVGFGKLNSDENPDIAARYGVMSLPTVIFFKDGEPVDEIIGAVPREEIEIRIKNLL 102 (104)
T ss_dssp HHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCSSCEEEEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHcCCceEEEEECCCCHHHHHhCCccccCEEEEEECCeEhhhccCCCCHHHHHHHHHHHh
Confidence 5688999999998899999999999999999999999999999999999999999 9999999998875
No 26
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.70 E-value=7.2e-16 Score=77.83 Aligned_cols=68 Identities=19% Similarity=0.335 Sum_probs=63.7
Q ss_pred chHHHHHHHhhCCC-cEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPD-VVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~-i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
+.|.++++++.+++ +.++.+|++++++++++|++.++||+++|++|+.+.++.|. +.+.|.++|++++
T Consensus 43 ~~~~l~~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~g~~~~~~l~~~l~~~l 112 (115)
T 1thx_A 43 MSPLINLAANTYSDRLKVVKLEIDPNPTTVKKYKVEGVPALRLVKGEQILDSTEGVISKDKLLSFLDTHL 112 (115)
T ss_dssp HHHHHHHHHHHTTTTCEEEEEESTTCHHHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhCCcEEEEEEEcCCCHHHHHHcCCCceeEEEEEcCCEEEEEecCCCCHHHHHHHHHHHh
Confidence 57899999999975 99999999999999999999999999999999999999999 9999999998875
No 27
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.70 E-value=4.7e-16 Score=77.85 Aligned_cols=69 Identities=30% Similarity=0.432 Sum_probs=64.0
Q ss_pred chHHHHHHHhhCCC-cEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhcC
Q psy11066 2 SLVMLQELASEFPD-VVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANRS 70 (70)
Q Consensus 2 ~~p~~~~~~~~~~~-i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~~ 70 (70)
+.|.++++++++++ +.++.+|++++++++++|++.++||++++++|+.+.++.|. +.+.+.++|++++.
T Consensus 37 ~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~ 107 (107)
T 1dby_A 37 IAPVVDEIAGEYKDKLKCVKLNTDESPNVASEYGIRSIPTIMVFKGGKKCETIIGAVPKATIVQTVEKYLN 107 (107)
T ss_dssp HHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHHTCCSSCEEEEESSSSEEEEEESCCCHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHhCCceEEEEEECCCCHHHHHHCCCCcCCEEEEEeCCEEEEEEeCCCCHHHHHHHHHHHhC
Confidence 57889999999975 99999999999999999999999999999999999999999 99999999998763
No 28
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.69 E-value=5.2e-16 Score=81.91 Aligned_cols=68 Identities=19% Similarity=0.313 Sum_probs=63.9
Q ss_pred chHHHHHHHhhCCC-cEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPD-VVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~-i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
+.|.|+++++++.+ +.|+.+|++++++++++|+|.++||+++|++|+.+.++.|. +.+.|.++|++++
T Consensus 73 ~~p~l~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 142 (148)
T 3p2a_A 73 FAPIFAETAAERAGKVRFVKVNTEAEPALSTRFRIRSIPTIMLYRNGKMIDMLNGAVPKAPFDNWLDEQL 142 (148)
T ss_dssp HHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEESSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCceEEEEEECcCCHHHHHHCCCCccCEEEEEECCeEEEEEeCCCCHHHHHHHHHHHh
Confidence 67999999999965 99999999999999999999999999999999999999999 9999999998765
No 29
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.69 E-value=6.8e-16 Score=80.84 Aligned_cols=68 Identities=29% Similarity=0.427 Sum_probs=63.9
Q ss_pred chHHHHHHHhhCCC-cEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPD-VVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~-i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
+.|.++++++++++ +.|+.+|++++++++++|++.++||+++|++|+.+.++.|. +.+.|.++|++++
T Consensus 68 ~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~i~~~l 137 (140)
T 1v98_A 68 VSPILEELARDHAGRLKVVKVNVDEHPGLAARYGVRSVPTLVLFRRGAPVATWVGASPRRVLEERLRPYL 137 (140)
T ss_dssp HHHHHHHHHHHTTTTEEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCceEEEEEECCCCHHHHHHCCCCccCEEEEEeCCcEEEEEeCCCCHHHHHHHHHHHH
Confidence 57899999999974 99999999999999999999999999999999999999999 9999999999876
No 30
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.69 E-value=7.4e-16 Score=78.03 Aligned_cols=68 Identities=31% Similarity=0.473 Sum_probs=63.9
Q ss_pred chHHHHHHHhhCCCcEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCCCHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPDVVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGANFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~l~~~i~~~~ 69 (70)
+.|.+++++++++++.++.+|++++++++++|++.++||++++++|+.+.++.|.+.+.|.++|++++
T Consensus 44 ~~~~l~~l~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~l~~~l~~~l 111 (112)
T 1syr_A 44 IAPFYEECSKTYTKMVFIKVDVDEVSEVTEKENITSMPTFKVYKNGSSVDTLLGANDSALKQLIEKYA 111 (112)
T ss_dssp HHHHHHHHHHHCTTSEEEEEETTTTHHHHHHTTCCSSSEEEEEETTEEEEEEESCCHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCCCEEEEEECCCCHHHHHHcCCCcccEEEEEECCcEEEEEeCCCHHHHHHHHHHhh
Confidence 57899999999988999999999999999999999999999999999999999998899999998875
No 31
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.69 E-value=7.3e-16 Score=77.67 Aligned_cols=68 Identities=35% Similarity=0.566 Sum_probs=63.4
Q ss_pred chHHHHHHHhhCC-CcEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCCCHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFP-DVVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGANFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~-~i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~l~~~i~~~~ 69 (70)
+.|.+++++++++ ++.++.+|++++++++++|++.++||++++++|+.+.++.|.+.+.|.++|++++
T Consensus 42 ~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~l~~~l~~~l 110 (112)
T 1ep7_A 42 IAPLFETLSNDYAGKVIFLKVDVDAVAAVAEAAGITAMPTFHVYKDGVKADDLVGASQDKLKALVAKHA 110 (112)
T ss_dssp HHHHHHHHHHHTTTTSEEEEEETTTTHHHHHHHTCCBSSEEEEEETTEEEEEEESCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCeEEEEEECCchHHHHHHcCCCcccEEEEEECCeEEEEEcCCCHHHHHHHHHHHh
Confidence 5789999999998 5999999999999999999999999999999999999999998889999998876
No 32
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.69 E-value=7.3e-16 Score=81.99 Aligned_cols=68 Identities=32% Similarity=0.614 Sum_probs=63.6
Q ss_pred chHHHHHHHhhCCCcEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCCCHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPDVVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGANFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~l~~~i~~~~ 69 (70)
+.|.+++++++++++.|+.+|++++++++++|+|.++||+++|++|+.+.++.|.+.+.|.++|++++
T Consensus 50 ~~p~l~~l~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~l~~~i~~~l 117 (153)
T 2wz9_A 50 MNEVMAELAKELPQVSFVKLEAEGVPEVSEKYEISSVPTFLFFKNSQKIDRLDGAHAPELTKKVQRHA 117 (153)
T ss_dssp HHHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTCCSSSEEEEEETTEEEEEEESSCHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHcCCeEEEEEECCCCHHHHHHcCCCCCCEEEEEECCEEEEEEeCCCHHHHHHHHHHHh
Confidence 67899999999988999999999999999999999999999999999999999997788999998875
No 33
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.69 E-value=7.7e-16 Score=76.66 Aligned_cols=68 Identities=29% Similarity=0.476 Sum_probs=63.3
Q ss_pred chHHHHHHHhhCCC-cEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPD-VVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~-i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
+.|.++++++++++ +.++.+|++++++++++|++.++||++++++|+.+.++.|. +.+.+.++|++++
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~G~~~~~~l~~~l~~~l 105 (105)
T 1fb6_A 36 IAPVIDELAKEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKYL 105 (105)
T ss_dssp HHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEEEECCCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhcCceEEEEEcCcchHHHHHhCCCCcccEEEEEeCCeEEEEEecCCCHHHHHHHHHhhC
Confidence 56889999999976 99999999999999999999999999999999999999999 9999999998764
No 34
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.69 E-value=9e-16 Score=78.54 Aligned_cols=68 Identities=28% Similarity=0.450 Sum_probs=63.4
Q ss_pred chHHHHHHHhhCCC-cEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPD-VVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~-i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
+.|.++++++++.+ +.++.+|++++++++++|+|.++||+++|++|+.+.++.|. +.+.|.++|++++
T Consensus 49 ~~~~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 118 (119)
T 1w4v_A 49 LGPRLEKMVAKQHGKVVMAKVDIDDHTDLAIEYEVSAVPTVLAMKNGDVVDKFVGIKDEDQLEAFLKKLI 118 (119)
T ss_dssp HHHHHHHHHHHTTTSSEEEEEETTTTHHHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCeEEEEEeCCCCHHHHHHcCCCcccEEEEEeCCcEEEEEcCCCCHHHHHHHHHHHh
Confidence 57889999999864 99999999999999999999999999999999999999999 9999999999875
No 35
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.69 E-value=4.7e-16 Score=77.66 Aligned_cols=68 Identities=26% Similarity=0.439 Sum_probs=63.0
Q ss_pred chHHHHHHHhhCCC-cEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPD-VVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~-i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
+.|.++++++++++ +.++.+|++++++++++|++.++||+++|++|+.+.++.|. +.+.|.++|++++
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 107 (107)
T 2i4a_A 38 IGPALGEIGKEFAGKVTVAKVNIDDNPETPNAYQVRSIPTLMLVRDGKVIDKKVGALPKSQLKAWVESAQ 107 (107)
T ss_dssp HHHHHHHHHHHHTTSEEEEEEETTTCCHHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHTC
T ss_pred HhHHHHHHHHHhCCcEEEEEEECCCCHHHHHhcCCCccCEEEEEeCCEEEEEecCCCCHHHHHHHHHhcC
Confidence 57889999999874 99999999999999999999999999999999999999999 9999999998764
No 36
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.69 E-value=3.1e-16 Score=82.32 Aligned_cols=68 Identities=22% Similarity=0.258 Sum_probs=64.0
Q ss_pred chHHHHHHHhhCCC-cEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPD-VVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~-i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
+.|.++++++++++ +.|+.+|++++++++++|+|.++||+++|++|+.+.++.|. +.+.|.++|++++
T Consensus 42 ~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 111 (140)
T 3hz4_A 42 MEPYFEEYAKEYGSSAVFGRINIATNPWTAEKYGVQGTPTFKFFCHGRPVWEQVGQIYPSILKNAVRDML 111 (140)
T ss_dssp HHHHHHHHHHHHTTTSEEEEEETTTCHHHHHHHTCCEESEEEEEETTEEEEEEESSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCceEEEEEECCcCHhHHHHCCCCcCCEEEEEeCCcEEEEEcCCCCHHHHHHHHHHHh
Confidence 67899999999987 99999999999999999999999999999999999999999 9999999998765
No 37
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.69 E-value=6.7e-16 Score=77.92 Aligned_cols=69 Identities=36% Similarity=0.587 Sum_probs=63.6
Q ss_pred chHHHHHHHhhCCCcEEEEEeCc-CcHHHHHHcCCCccCEEEEEeCCeEEeeeeCCCHHHHHHHHHhhcC
Q psy11066 2 SLVMLQELASEFPDVVFLKVDVD-ESEDIAMAYDISSMPTFVFVKSTAKVEQFSGANFDKLRSTVLANRS 70 (70)
Q Consensus 2 ~~p~~~~~~~~~~~i~~~~vd~~-~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~l~~~i~~~~~ 70 (70)
+.|.+++++++++++.++.+|++ ++.+++++|++.++||++++++|+.+.++.|.+.+.|.++|+++++
T Consensus 42 ~~~~l~~~~~~~~~v~~~~vd~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~l~~~l~~~~~ 111 (111)
T 2pu9_C 42 MAPKYEKLAEEYLDVIFLKLDCNQENKTLAKELGIRVVPTFKILKENSVVGEVTGAKYDKLLEAIQAARS 111 (111)
T ss_dssp HHHHHHHHHHHCTTSEEEEEECSSTTHHHHHHHCCSBSSEEEEESSSSEEEEEESSCHHHHHHHHHHHHC
T ss_pred HCHHHHHHHHHCCCeEEEEEecCcchHHHHHHcCCCeeeEEEEEeCCcEEEEEcCCCHHHHHHHHHHhhC
Confidence 57899999999988999999998 7899999999999999999999999999999988899999988764
No 38
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.69 E-value=3.9e-16 Score=81.06 Aligned_cols=69 Identities=25% Similarity=0.392 Sum_probs=64.3
Q ss_pred chHHHHHHHhhCCC-cEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhcC
Q psy11066 2 SLVMLQELASEFPD-VVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANRS 70 (70)
Q Consensus 2 ~~p~~~~~~~~~~~-i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~~ 70 (70)
+.|.++++++++++ +.|+.+|++++++++++|+|.++||+++|++|+.+.++.|. +.+.|.++|++.++
T Consensus 58 ~~p~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~ 128 (128)
T 2o8v_B 58 IAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLA 128 (128)
T ss_dssp THHHHHHHHHHTTTTEEEEEEETTTCCTTSGGGTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred HhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCCccCEEEEEeCCEEEEEEcCCCCHHHHHHHHHHhhC
Confidence 57899999999975 99999999999999999999999999999999999999999 99999999998763
No 39
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.68 E-value=1.2e-15 Score=77.39 Aligned_cols=68 Identities=40% Similarity=0.703 Sum_probs=63.6
Q ss_pred chHHHHHHHhhCCCcEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCCCHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPDVVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGANFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~l~~~i~~~~ 69 (70)
+.|.+++++++++++.++.+|++++++++++|++.++||++++++|+.+.++.|.+.+.|.++|++++
T Consensus 46 ~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~l~~~l~~~~ 113 (118)
T 2vm1_A 46 IAPVFAEYAKKFPGAIFLKVDVDELKDVAEAYNVEAMPTFLFIKDGEKVDSVVGGRKDDIHTKIVALM 113 (118)
T ss_dssp HHHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTCCSBSEEEEEETTEEEEEEESCCHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHCCCcEEEEEEcccCHHHHHHcCCCcCcEEEEEeCCeEEEEecCCCHHHHHHHHHHHh
Confidence 57899999999988999999999999999999999999999999999999999998889999998875
No 40
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.68 E-value=1.1e-15 Score=76.37 Aligned_cols=68 Identities=29% Similarity=0.469 Sum_probs=63.5
Q ss_pred chHHHHHHHhhCCC-cEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPD-VVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~-i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
+.|.++++++++++ +.++.+|++++++++++|++.++||+++|++|+.+.++.|. +.+.|.++|++++
T Consensus 36 ~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~l~~~l 105 (109)
T 2yzu_A 36 IAPILEEIAKEYEGKLLVAKLDVDENPKTAMRYRVMSIPTVILFKDGQPVEVLVGAQPKRNYQAKIEKHL 105 (109)
T ss_dssp HHHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHTTC
T ss_pred hhHHHHHHHHHhhCceEEEEEECCCCHhHHHhCCCCcCCEEEEEeCCcEeeeEeCCCCHHHHHHHHHHHh
Confidence 56889999999975 99999999999999999999999999999999999999999 9999999998875
No 41
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.68 E-value=8.5e-16 Score=77.58 Aligned_cols=68 Identities=24% Similarity=0.462 Sum_probs=61.6
Q ss_pred chHHHHHHHhh--CCCcEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCCCHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASE--FPDVVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGANFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~--~~~i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~l~~~i~~~~ 69 (70)
+.|.+++++++ ++++.++.+|++++++++++|++.++||+++|++|+.+.++.|.+.++|.++|++++
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~l~~~l~~~~ 108 (112)
T 3d6i_A 39 LKQVFEAISNEPSNSNVSFLSIDADENSEISELFEISAVPYFIIIHKGTILKELSGADPKEYVSLLEDCK 108 (112)
T ss_dssp HHHHHHHHHHCGGGTTSEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEECSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCEEEEEEecccCHHHHHHcCCCcccEEEEEECCEEEEEecCCCHHHHHHHHHHHH
Confidence 57899999998 567999999999999999999999999999999999999999996567999998765
No 42
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.68 E-value=1.2e-15 Score=77.96 Aligned_cols=68 Identities=37% Similarity=0.590 Sum_probs=63.3
Q ss_pred chHHHHHHHhhCCCcEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCCCHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPDVVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGANFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~l~~~i~~~~ 69 (70)
+.|.|++++++++++.|+.+|++++++++++|++.++||++++++|+.+.++.|...+.|.++|++++
T Consensus 52 ~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~l~~~l~~~l 119 (122)
T 2vlu_A 52 MAPVFADLAKKFPNAVFLKVDVDELKPIAEQFSVEAMPTFLFMKEGDVKDRVVGAIKEELTAKVGLHA 119 (122)
T ss_dssp HHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEEESSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCcEEEEEECCCCHHHHHHcCCCcccEEEEEeCCEEEEEEeCcCHHHHHHHHHHHh
Confidence 57899999999988999999999999999999999999999999999999999988788999998875
No 43
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.68 E-value=1.1e-15 Score=76.67 Aligned_cols=68 Identities=25% Similarity=0.396 Sum_probs=62.6
Q ss_pred chHHHHHHHhhCC----CcEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFP----DVVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~----~i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
+.|.++++++.+. ++.++.+|++++++++++|+|.++||+++|++|+.+.++.|. +.+.|.++|++++
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~l~~~a 111 (111)
T 3uvt_A 39 LAPTWEELSKKEFPGLAGVKIAEVDCTAERNICSKYSVRGYPTLLLFRGGKKVSEHSGGRDLDSLHRFVLSQA 111 (111)
T ss_dssp HHHHHHHHHTCCCCC-CCEEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEECSCCSHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHhhccCCceEEEEEeccccHhHHHhcCCCcccEEEEEeCCcEEEeccCCcCHHHHHHHHHhcC
Confidence 5789999998873 599999999999999999999999999999999999999999 9999999998753
No 44
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.68 E-value=1.6e-15 Score=75.63 Aligned_cols=68 Identities=57% Similarity=0.820 Sum_probs=62.4
Q ss_pred chHHHHHHHhhC-CCcEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCCCHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEF-PDVVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGANFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~-~~i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~l~~~i~~~~ 69 (70)
+.|.++++++.+ +++.++.+|++++++++++|++.++||++++++|+.+.++.|.+.+.|.++|++++
T Consensus 38 ~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~g~~~~~l~~~i~~~l 106 (106)
T 1xwb_A 38 ISPKLVELSTQFADNVVVLKVDVDECEDIAMEYNISSMPTFVFLKNGVKVEEFAGANAKRLEDVIKANI 106 (106)
T ss_dssp HHHHHHHHHHHTTTTEEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEEESCCHHHHHHHHHHTC
T ss_pred hhHHHHHHHHHhCCCeEEEEEeccchHHHHHHcCCCcccEEEEEcCCcEEEEEcCCCHHHHHHHHHHhC
Confidence 568899999999 45999999999999999999999999999999999999999998888999998764
No 45
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.68 E-value=1.2e-15 Score=77.63 Aligned_cols=67 Identities=36% Similarity=0.599 Sum_probs=62.4
Q ss_pred chHHHHHHHhhCCCcEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCCCHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPDVVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGANFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~l~~~i~~~~ 69 (70)
+.|.++++++++ ++.++.+|++++++++++|+|.++||++++++|+.+.++.|.+.+.|.++|++++
T Consensus 51 ~~~~~~~~~~~~-~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~l~~~l~~~l 117 (117)
T 2xc2_A 51 IAPLFKELSEKY-DAIFVKVDVDKLEETARKYNISAMPTFIAIKNGEKVGDVVGASIAKVEDMIKKFI 117 (117)
T ss_dssp HHHHHHHHHTTS-SSEEEEEETTTSHHHHHHTTCCSSSEEEEEETTEEEEEEESSCHHHHHHHHHHHC
T ss_pred HhHHHHHHHHHc-CcEEEEEECCccHHHHHHcCCCccceEEEEeCCcEEEEEeCCCHHHHHHHHHHhC
Confidence 578999999998 8999999999999999999999999999999999999999998889999998764
No 46
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.68 E-value=6.5e-16 Score=78.76 Aligned_cols=68 Identities=25% Similarity=0.372 Sum_probs=63.2
Q ss_pred chHHHHHHHhhCCC-cEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPD-VVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~-i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
+.|.++++++++++ +.++.+|++++++++++|+|.++||+++|++|+.+.++.|. +.+.|.++|++++
T Consensus 48 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~G~~~~~~l~~~l~~~l 117 (121)
T 2i1u_A 48 VAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVV 117 (121)
T ss_dssp HHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHTCSCC
T ss_pred HHHHHHHHHHHhcCCeEEEEEECCCCHHHHHhcCCCcCCEEEEEECCEEEEEecCCCCHHHHHHHHHHHH
Confidence 57899999999965 99999999999999999999999999999999999999999 8999999998765
No 47
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.67 E-value=3.6e-16 Score=80.92 Aligned_cols=67 Identities=19% Similarity=0.386 Sum_probs=62.5
Q ss_pred chHHHHHHHhhCCC-cEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhh
Q psy11066 2 SLVMLQELASEFPD-VVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLAN 68 (70)
Q Consensus 2 ~~p~~~~~~~~~~~-i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~ 68 (70)
+.|.++++++++++ +.++.+|++++++++++|+|.++||+++|++|+.+.++.|. +.++|.++|+++
T Consensus 60 ~~p~l~~~~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 128 (128)
T 3ul3_B 60 QSTEMDKLQKYYGKRIYLLKVDLDKNESLARKFSVKSLPTIILLKNKTMLARKDHFVSSNDLIALIKKH 128 (128)
T ss_dssp HHHHHHHHHHHHGGGEEEEEEEGGGCHHHHHHTTCCSSSEEEEEETTEEEEEESSCCCHHHHHHHHTTC
T ss_pred HhHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCCCcCEEEEEECCEEEEEecCCCCHHHHHHHHHhC
Confidence 67899999999875 99999999999999999999999999999999999999999 999999999763
No 48
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.67 E-value=1.9e-15 Score=77.54 Aligned_cols=69 Identities=36% Similarity=0.587 Sum_probs=63.5
Q ss_pred chHHHHHHHhhCCCcEEEEEeCc-CcHHHHHHcCCCccCEEEEEeCCeEEeeeeCCCHHHHHHHHHhhcC
Q psy11066 2 SLVMLQELASEFPDVVFLKVDVD-ESEDIAMAYDISSMPTFVFVKSTAKVEQFSGANFDKLRSTVLANRS 70 (70)
Q Consensus 2 ~~p~~~~~~~~~~~i~~~~vd~~-~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~l~~~i~~~~~ 70 (70)
+.|.+++++++++++.++.+|++ ++++++++|++.++||++++++|+.+.++.|.+.+++.++|+++++
T Consensus 55 ~~~~l~~~~~~~~~~~~~~vd~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~l~~~i~~~~~ 124 (124)
T 1faa_A 55 MAPKYEKLAEEYLDVIFLKLDCNQENKTLAKELGIRVVPTFKILKENSVVGEVTGAKYDKLLEAIQAARS 124 (124)
T ss_dssp HHHHHHHHHHHCTTSEEEEEECSSTTHHHHHHHCCSSSSEEEEEETTEEEEEEESSCHHHHHHHHHHHTC
T ss_pred HhHHHHHHHHHCCCCEEEEEecCcchHHHHHHcCCCeeeEEEEEeCCcEEEEEcCCCHHHHHHHHHHhhC
Confidence 57899999999989999999998 6899999999999999999999999999999988899999988753
No 49
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.67 E-value=1.8e-15 Score=77.12 Aligned_cols=66 Identities=38% Similarity=0.549 Sum_probs=61.5
Q ss_pred chHHHHHHHhhCCCcEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCCCHHHHHHHHHh
Q psy11066 2 SLVMLQELASEFPDVVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGANFDKLRSTVLA 67 (70)
Q Consensus 2 ~~p~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~l~~~i~~ 67 (70)
+.|.+++++++++++.|+.+|++++++++++|++.++||++++++|+.+.++.|...+.|.++|++
T Consensus 48 ~~p~l~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~l~~~l~~ 113 (114)
T 2oe3_A 48 MQPHLTKLIQAYPDVRFVKCDVDESPDIAKECEVTAMPTFVLGKDGQLIGKIIGANPTALEKGIKD 113 (114)
T ss_dssp THHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCSBSEEEEEETTEEEEEEESSCHHHHHHHHHT
T ss_pred HHHHHHHHHHHCCCCEEEEEECCCCHHHHHHCCCCcccEEEEEeCCeEEEEEeCCCHHHHHHHHHh
Confidence 578999999999889999999999999999999999999999999999999999887889988875
No 50
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.66 E-value=1.8e-15 Score=78.98 Aligned_cols=68 Identities=31% Similarity=0.574 Sum_probs=63.3
Q ss_pred chHHHHHHHhhCCCcEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCCCHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPDVVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGANFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~l~~~i~~~~ 69 (70)
+.|.+++++++++++.|+.+|++++++++++|+|.++||++++++|+.+.++.|.+.+.|.++|++++
T Consensus 64 ~~~~l~~l~~~~~~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~l~~~l~~~~ 131 (139)
T 3d22_A 64 IAPYYIELSENYPSLMFLVIDVDELSDFSASWEIKATPTFFFLRDGQQVDKLVGANKPELHKKITAIL 131 (139)
T ss_dssp HHHHHHHHHHHCTTSEEEEEETTTSHHHHHHTTCCEESEEEEEETTEEEEEEESCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEEEeCcccHHHHHHcCCCcccEEEEEcCCeEEEEEeCCCHHHHHHHHHHHh
Confidence 57899999999988999999999999999999999999999999999999999998889999998764
No 51
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.66 E-value=1.2e-15 Score=76.87 Aligned_cols=68 Identities=40% Similarity=0.652 Sum_probs=63.3
Q ss_pred chHHHHHHHhhCCCcEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCCCHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPDVVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGANFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~l~~~i~~~~ 69 (70)
+.|.+++++++++++.++.+|++++++++++|++.++||++++++|+.+.++.|.+.+.|.++|++++
T Consensus 44 ~~~~l~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~g~~~~~l~~~l~~~~ 111 (113)
T 1ti3_A 44 IAPIFAELAKKFPNVTFLKVDVDELKAVAEEWNVEAMPTFIFLKDGKLVDKTVGADKDGLPTLVAKHA 111 (113)
T ss_dssp HHHHHHHHHHHCSSEEEEEEETTTCHHHHHHHHCSSTTEEEEEETTEEEEEEECCCTTHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcEEEEEEccccHHHHHhCCCCcccEEEEEeCCEEEEEEecCCHHHHHHHHHHhh
Confidence 56889999999988999999999999999999999999999999999999999998889999998765
No 52
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.65 E-value=1.7e-15 Score=80.56 Aligned_cols=68 Identities=21% Similarity=0.277 Sum_probs=63.4
Q ss_pred chHHHHHHHhhCCC-cEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEE---------eeeeC-C-CHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPD-VVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKV---------EQFSG-A-NFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~-i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~---------~~~~g-~-~~~~l~~~i~~~~ 69 (70)
+.|.++++++++++ +.++.||++++++++++|+|.++||++++++|+.+ .++.| . +.++|.++|+++.
T Consensus 41 ~~p~l~~l~~~~~~~~~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~~ 120 (149)
T 3gix_A 41 LDDILSKTSSDLSKMAAIYLVDVDQTAVYTQYFDISYIPSTVFFFNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVIY 120 (149)
T ss_dssp HHHHHHHHHTTTTTTEEEEEEETTTCCHHHHHTTCCSSSEEEEEETTEEEEEECSSSCCSCEESCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCceEEEEEECCcCHHHHHHcCCCccCeEEEEECCeEEEeecCCCCCCeEeeecCCHHHHHHHHHHHH
Confidence 67999999999987 99999999999999999999999999999999999 99999 7 9999999998753
No 53
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.64 E-value=2.5e-15 Score=77.13 Aligned_cols=69 Identities=33% Similarity=0.508 Sum_probs=63.6
Q ss_pred chHHHHHHHhhCCC--cEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCCCHHHHHHHHHhhcC
Q psy11066 2 SLVMLQELASEFPD--VVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGANFDKLRSTVLANRS 70 (70)
Q Consensus 2 ~~p~~~~~~~~~~~--i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~l~~~i~~~~~ 70 (70)
+.|.++++++++++ +.++.+|++++++++++|++.++||+++|++|+.+.++.|.+.+.|.++|+++++
T Consensus 51 ~~~~l~~l~~~~~~~~v~~~~vd~d~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~l~~~l~~~l~ 121 (121)
T 2j23_A 51 IGPVFEKISDTPAGDKVGFYKVDVDEQSQIAQEVGIRAMPTFVFFKNGQKIDTVVGADPSKLQAAITQHSA 121 (121)
T ss_dssp HHHHHHHHHTSTHHHHSEEEEEETTTCHHHHHHHTCCSSSEEEEEETTEEEEEEESSCHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHCcCCcEEEEEEECcCCHHHHHHcCCCcccEEEEEECCeEEeeEcCCCHHHHHHHHHHhhC
Confidence 56889999999875 9999999999999999999999999999999999999999988999999998763
No 54
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.64 E-value=3e-15 Score=85.86 Aligned_cols=69 Identities=20% Similarity=0.380 Sum_probs=64.3
Q ss_pred CchHHHHHHHhhCCC-cEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 1 MSLVMLQELASEFPD-VVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 1 ~~~p~~~~~~~~~~~-i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
++.|.++++++++++ +.|++||++++++++++|+|.++||+++|++|+.+.++.|. +.+.+..++.+.+
T Consensus 43 ~~~p~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~g~~~~~~l~~~l~~~l 113 (287)
T 3qou_A 43 QLTPILESLAAQYNGQFILAKLDCDAEQMIAAQFGLRAIPTVYLFQNGQPVDGFQGPQPEEAIRALLDXVL 113 (287)
T ss_dssp TTHHHHHHHHHHHTSSSEEEEEETTTCHHHHHTTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHcCCCeEEEEEeCccCHHHHHHcCCCCCCeEEEEECCEEEEEeeCCCCHHHHHHHHHHHc
Confidence 478999999999987 99999999999999999999999999999999999999999 9999999998753
No 55
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.64 E-value=1.9e-15 Score=78.98 Aligned_cols=67 Identities=16% Similarity=0.115 Sum_probs=62.4
Q ss_pred chHHHHHHHhhCCCcEEEEEeC---------cCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPDVVFLKVDV---------DESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~i~~~~vd~---------~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
+.|.+++++++++ +.|+.+|+ +++++++++|+|.++||+++|++|+.+.++.|. +.+.+..++++++
T Consensus 49 ~~p~l~~l~~~~~-v~~~~vd~~~~~~~~~~d~~~~l~~~~~v~~~Pt~~~~~~G~~v~~~~G~~~~~~~~~~i~~~~ 125 (135)
T 3emx_A 49 DWPQLIQASKEVD-VPIVMFIWGSLIGERELSAARLEMNKAGVEGTPTLVFYKEGRIVDKLVGATPWSLKVEKAREIY 125 (135)
T ss_dssp HHHHHHHHHTTCC-SCEEEEEECTTCCHHHHHHHHHHHHHHTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHC
T ss_pred hChhHHHHHHHCC-CEEEEEECCCchhhhhhhhhHHHHHHcCCceeCeEEEEcCCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 5799999999997 99999999 889999999999999999999999999999999 9999999988765
No 56
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.63 E-value=2.3e-15 Score=77.79 Aligned_cols=69 Identities=20% Similarity=0.195 Sum_probs=62.8
Q ss_pred CchHHHHHHHhhCC-----CcEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 1 MSLVMLQELASEFP-----DVVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 1 ~~~p~~~~~~~~~~-----~i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
++.|.++++++++. ++.|+.+|++++++++++|+|.++||+++|++|+.+.++.|. +.+.|.++|.+++
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~~~~~~G~~~~~~l~~~l~~~~ 116 (133)
T 1x5d_A 42 NLEPEWAAAASEVKEQTKGKVKLAAVDATVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGRTRSDIVSRALDLF 116 (133)
T ss_dssp THHHHHHHHHHHHHHHTTTSEEEEEEETTTCCHHHHHHTCCSSSEEEEEETTEEEEEECSCCSHHHHHHHHHHHH
T ss_pred hhcHHHHHHHHHHHhhcCCcEEEEEEECCCCHHHHHhCCCCeeCeEEEEeCCCceEEecCCCCHHHHHHHHHHHh
Confidence 36789999998874 499999999999999999999999999999999999999999 9999999998764
No 57
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.63 E-value=9e-16 Score=80.19 Aligned_cols=67 Identities=16% Similarity=0.202 Sum_probs=60.4
Q ss_pred chHHHHHHHhhCCC-cEEEEEeCcCcHHHHHHcCCCc--cCEEEEEeC--CeEEeeee--CC-CHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPD-VVFLKVDVDESEDIAMAYDISS--MPTFVFVKS--TAKVEQFS--GA-NFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~-i~~~~vd~~~~~~~~~~~~i~~--~Pt~~~~~~--g~~~~~~~--g~-~~~~l~~~i~~~~ 69 (70)
+.|.+++++++|.+ +.|+++|.++++++++.|++++ +||+++|++ |+. .++. |. +.+.|.+||++++
T Consensus 40 ~~p~l~~~A~~~~gk~~f~~vd~d~~~~~a~~~gi~~~~iPtl~i~~~~~g~~-~~~~~~g~~~~~~l~~fi~~~l 114 (133)
T 2djk_A 40 LSDKLKPIAEAQRGVINFGTIDAKAFGAHAGNLNLKTDKFPAFAIQEVAKNQK-FPFDQEKEITFEAIKAFVDDFV 114 (133)
T ss_dssp HHHHHHHHHHSSTTTSEEEEECTTTTGGGTTTTTCCSSSSSEEEEECTTTCCB-CCCCSSSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCeEEEEEEchHHhHHHHHHcCCCcccCCEEEEEecCcCcc-cCCCCccccCHHHHHHHHHHHH
Confidence 68999999999976 9999999999999999999999 999999987 766 5665 88 9999999998765
No 58
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.63 E-value=7.3e-15 Score=75.22 Aligned_cols=68 Identities=34% Similarity=0.573 Sum_probs=62.3
Q ss_pred chHHHHHHHhhCCCcEEEEEeCcCcHHHHHHcCCCccCEEEEEeC----CeEEeeeeCCCHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPDVVFLKVDVDESEDIAMAYDISSMPTFVFVKS----TAKVEQFSGANFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~----g~~~~~~~g~~~~~l~~~i~~~~ 69 (70)
+.|.+++++++++++.|+.+|++++++++++|+|.++||+++|++ |+.+.++.|...++|++.+.++.
T Consensus 41 ~~~~l~~l~~~~~~v~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~~~~~G~~~~~~~G~~~~~l~~~~~~~~ 112 (118)
T 2f51_A 41 LGQILPSIAEANKDVTFIKVDVDKNGNAADAYGVSSIPALFFVKKEGNEIKTLDQFVGADVSRIKADIEKFK 112 (118)
T ss_dssp HHHHHHHHHHHCTTSEEEEEETTTCHHHHHHTTCCSSSEEEEEEEETTEEEEEEEEESCCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCCeEEEEEECCCCHHHHHhcCCCCCCEEEEEeCCCCcceEEEeecCCCHHHHHHHHHHhh
Confidence 578899999999679999999999999999999999999999988 99999999997777999998764
No 59
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.62 E-value=8e-15 Score=75.41 Aligned_cols=68 Identities=18% Similarity=0.201 Sum_probs=62.9
Q ss_pred chHHHHHHHhhCC-CcEEEEEe--CcCcHHHHHHcCCCccCEEEEEe-CCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFP-DVVFLKVD--VDESEDIAMAYDISSMPTFVFVK-STAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~-~i~~~~vd--~~~~~~~~~~~~i~~~Pt~~~~~-~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
+.|.+++++++++ ++.++.+| ++++.+++++|++.++||+++|+ +|+.+.++.|. +.+.|.++|++++
T Consensus 44 ~~~~l~~~~~~~~~~v~~~~v~~~~d~~~~~~~~~~v~~~Pt~~~~~~~G~~~~~~~G~~~~~~l~~~l~~~~ 116 (126)
T 2l57_A 44 MQKELSYVSKEREGKFNIYYARLEEEKNIDLAYKYDANIVPTTVFLDKEGNKFYVHQGLMRKNNIETILNSLG 116 (126)
T ss_dssp HHHHHHHHHHHSSSSCEEEEEETTSSHHHHHHHHTTCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhcCCeEEEEEeCCCCchHHHHHHcCCcceeEEEEECCCCCEEEEecCCCCHHHHHHHHHHHh
Confidence 5788999999994 59999999 99999999999999999999998 99999999999 9999999999875
No 60
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.62 E-value=7.4e-15 Score=76.67 Aligned_cols=67 Identities=25% Similarity=0.420 Sum_probs=61.4
Q ss_pred chHHHHHHHhhCCC-cEEEEEeCcCcHHHHHHcCCCccCEEEEE-eCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPD-VVFLKVDVDESEDIAMAYDISSMPTFVFV-KSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~-i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~-~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
+.|.++++++++++ +.++.+|++++++++++|+|.++||+++| ++|+.+ ++.|. +.+.|.++|++++
T Consensus 56 ~~~~l~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~~G~~~-~~~G~~~~~~l~~~l~~~~ 125 (136)
T 2l5l_A 56 VAPILDELAKEYDGQIVIYKVDTEKEQELAGAFGIRSIPSILFIPMEGKPE-MAQGAMPKASFKKAIDEFL 125 (136)
T ss_dssp HHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSCEEEEECSSSCCE-EEESCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHcCCCCCCEEEEECCCCcEE-EEeCCCCHHHHHHHHHHHh
Confidence 57899999999975 99999999999999999999999999999 899887 78898 9999999998875
No 61
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.61 E-value=5.4e-15 Score=77.10 Aligned_cols=68 Identities=18% Similarity=0.304 Sum_probs=61.1
Q ss_pred CchHHHHHHHhhCC----CcEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 1 MSLVMLQELASEFP----DVVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 1 ~~~p~~~~~~~~~~----~i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
++.|.|+++++.+. ++.++.+|++++.+++++|+|.++||+++|++|+ +.++.|. +.+.|.++|++++
T Consensus 51 ~~~p~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~-~~~~~g~~~~~~l~~~l~~~~ 123 (140)
T 2dj1_A 51 QFAPEYEKIASTLKDNDPPIAVAKIDATSASMLASKFDVSGYPTIKILKKGQ-AVDYDGSRTQEEIVAKVREVS 123 (140)
T ss_dssp TTHHHHHHHHHHHHSSSSCCEEEEECTTTCHHHHHHTTCCSSSEEEEEETTE-EEECCSCCCHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHhccCCceEEEEEeCcccHHHHHHCCCCccCeEEEEECCc-EEEcCCCCCHHHHHHHHHHhc
Confidence 36789999988764 2999999999999999999999999999999999 7888999 9999999998875
No 62
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.61 E-value=7.5e-15 Score=82.11 Aligned_cols=68 Identities=25% Similarity=0.392 Sum_probs=64.5
Q ss_pred chHHHHHHHhhCCC-cEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPD-VVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~-i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
+.|.++++++++++ +.++.+|++++++++++|+|.++||+++|++|+.+.++.|. +.+.|.++|++++
T Consensus 48 ~~p~l~~l~~~~~~~v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 117 (222)
T 3dxb_A 48 IAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 117 (222)
T ss_dssp HHHHHHHHHHHTTTTCEEEEEETTTCTTTGGGGTCCSBSEEEEEETTEEEEEEESCCCHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhcCCcEEEEEECCCCHHHHHHcCCCcCCEEEEEECCeEEEEeccccChHHHHHHHHhhc
Confidence 67999999999987 99999999999999999999999999999999999999999 9999999998865
No 63
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.61 E-value=7.2e-15 Score=75.59 Aligned_cols=67 Identities=18% Similarity=0.226 Sum_probs=60.9
Q ss_pred chHHHHHHHhhCC--CcEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFP--DVVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~--~i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
+.|.++++++.++ ++.|+.+|++++++++++|+|.++||+++|++|+ +.++.|. +.+.|.++|++++
T Consensus 40 ~~p~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~-~~~~~G~~~~~~l~~~l~~~~ 109 (126)
T 1x5e_A 40 LQPEWESFAEWGEDLEVNIAKVDVTEQPGLSGRFIINALPTIYHCKDGE-FRRYQGPRTKKDFINFISDKE 109 (126)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEETTTCHHHHHHTTCCSSSEEEEEETTE-EEECCSCCCHHHHHHHHHTCG
T ss_pred HhHHHHHHHHHhccCCeEEEEEECcCCHHHHHHcCCcccCEEEEEeCCe-EEEeecCCCHHHHHHHHHHHh
Confidence 5789999998876 4999999999999999999999999999999998 5789999 9999999998764
No 64
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.60 E-value=7.5e-15 Score=81.42 Aligned_cols=68 Identities=13% Similarity=0.216 Sum_probs=63.7
Q ss_pred chHHHHHHHhhCCC-cEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPD-VVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~-i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
+.|.++++++++++ +.|+.||++++++++++|+|.++||+++|++|+.+.++.|. +.+.|.++|.+++
T Consensus 132 ~~p~~~~l~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~i~~~l 201 (210)
T 3apq_A 132 LAPTWREFAKEVDGLLRIGAVNCGDDRMLCRMKGVNSYPSLFIFRSGMAAVKYNGDRSKESLVAFAMQHV 201 (210)
T ss_dssp HHHHHHHHHHHTBTTBEEEEEETTTCHHHHHHTTCCSSSEEEEECTTSCCEECCSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCceEEEEEECCccHHHHHHcCCCcCCeEEEEECCCceeEecCCCCHHHHHHHHHHhC
Confidence 57999999999976 99999999999999999999999999999999999999999 9999999998765
No 65
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.60 E-value=6.6e-15 Score=75.94 Aligned_cols=69 Identities=16% Similarity=0.263 Sum_probs=62.1
Q ss_pred CchHHHHHHHhhCCC-cEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeE-EeeeeCC-CHHHHHHHHHhhc
Q psy11066 1 MSLVMLQELASEFPD-VVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAK-VEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 1 ~~~p~~~~~~~~~~~-i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~-~~~~~g~-~~~~l~~~i~~~~ 69 (70)
++.|.++++++++++ +.++.+|++++++++++|+|.++||+++|++|.. +.++.|. +.+.|.+++.+.+
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~l 123 (130)
T 2dml_A 52 RLTPEWKKAATALKDVVKVGAVNADKHQSLGGQYGVQGFPTIKIFGANKNKPEDYQGGRTGEAIVDAALSAL 123 (130)
T ss_dssp GGHHHHHHHHHHTTTTSEEEEEETTTCHHHHHHHTCCSSSEEEEESSCTTSCEECCSCCSHHHHHHHHHHHH
T ss_pred hhCHHHHHHHHHhcCceEEEEEeCCCCHHHHHHcCCCccCEEEEEeCCCCeEEEeecCCCHHHHHHHHHHHH
Confidence 367999999999987 9999999999999999999999999999987765 8889999 9999999998754
No 66
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.60 E-value=1.8e-14 Score=75.25 Aligned_cols=67 Identities=27% Similarity=0.407 Sum_probs=60.9
Q ss_pred chHHHHHHHhhCCC-cEEEEEeCcCcHHHHHHcCCCccCEEEEE-eCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPD-VVFLKVDVDESEDIAMAYDISSMPTFVFV-KSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~-i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~-~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
+.|.++++++.+++ +.++.+|++++++++++|+|.++||+++| ++|+.+ ++.|. +.+.|.++|++++
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~~g~~~-~~~G~~~~~~l~~~l~~~l 138 (141)
T 3hxs_A 69 VAPILEELSKEYAGKIYIYKVNVDKEPELARDFGIQSIPTIWFVPMKGEPQ-VNMGALSKEQLKGYIDKVL 138 (141)
T ss_dssp HHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEECSSSCCE-EEESCCCHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhcCceEEEEEECCCCHHHHHHcCCCCcCEEEEEeCCCCEE-EEeCCCCHHHHHHHHHHHH
Confidence 57899999999985 99999999999999999999999999999 566665 88999 9999999999876
No 67
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.59 E-value=1.2e-14 Score=75.04 Aligned_cols=67 Identities=19% Similarity=0.309 Sum_probs=58.7
Q ss_pred chHHHHHHHhhC------CCcEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEE--eeeeCC-CHHHHHHHHHhh
Q psy11066 2 SLVMLQELASEF------PDVVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKV--EQFSGA-NFDKLRSTVLAN 68 (70)
Q Consensus 2 ~~p~~~~~~~~~------~~i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~--~~~~g~-~~~~l~~~i~~~ 68 (70)
+.|.|+++++.+ +++.++.+|++++++++++|+|.++||+++|++|... .++.|. +.+.|.+||.++
T Consensus 51 ~~p~~~~la~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 51 AMRLWDDLSMSQSQKRNHLTFVAARIDGEKYPDVIERMRVSGFPTMRYYTRIDKQEPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp HHHHHHHHHHHHHTSTTTTTEEEEEEETTTCHHHHHHTTCCSSSEEEEECSSCSSSCEECCSCCCHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHhcccCCCeEEEEEEccccHhHHHhcCCccCCEEEEEeCCCCCCceEecCCccHHHHHHHHHhc
Confidence 678999998643 2499999999999999999999999999999888664 578898 999999999875
No 68
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.59 E-value=3.1e-15 Score=81.98 Aligned_cols=69 Identities=16% Similarity=0.181 Sum_probs=57.5
Q ss_pred CchHHHHHHHhhCC-----C-cEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEE------------eee---eC-C-C
Q psy11066 1 MSLVMLQELASEFP-----D-VVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKV------------EQF---SG-A-N 57 (70)
Q Consensus 1 ~~~p~~~~~~~~~~-----~-i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~------------~~~---~g-~-~ 57 (70)
+|.|+|+++++++. + +.|++||++++++++++|+|+++||+++|++|... .++ .| . +
T Consensus 61 ~l~P~~e~lA~~~~~~~~~~~v~f~kvD~d~~~~la~~~~I~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ 140 (178)
T 3ga4_A 61 DFEKTYHAVADVIRSQAPQSLNLFFTVDVNEVPQLVKDLKLQNVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAEN 140 (178)
T ss_dssp HHHHHHHHHHHHHHHHCTTCCEEEEEEETTTCHHHHHHTTCCSSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTC
T ss_pred HHHHHHHHHHHHhhhccCCCCEEEEEEECccCHHHHHHcCCCCCCEEEEEcCCCCCCccccccccCCcceeecccCCCcC
Confidence 37899999999874 4 99999999999999999999999999999988532 233 13 4 8
Q ss_pred HHHHHHHHHhhc
Q psy11066 58 FDKLRSTVLANR 69 (70)
Q Consensus 58 ~~~l~~~i~~~~ 69 (70)
.+.|.+||.+..
T Consensus 141 ae~la~fi~~~t 152 (178)
T 3ga4_A 141 TLQFGDFLAKIL 152 (178)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc
Confidence 899999998754
No 69
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.58 E-value=1.8e-14 Score=80.19 Aligned_cols=69 Identities=20% Similarity=0.232 Sum_probs=63.5
Q ss_pred chHHHHHHHhhCC-----CcEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhcC
Q psy11066 2 SLVMLQELASEFP-----DVVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANRS 70 (70)
Q Consensus 2 ~~p~~~~~~~~~~-----~i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~~ 70 (70)
+.|.++++++.++ ++.++.+|++++++++++|+|.++||+++|++|+.+.++.|. +.+.|.++|+++++
T Consensus 152 ~~p~~~~l~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~ 226 (226)
T 1a8l_A 152 AVRMAHKFAIENTKAGKGKILGDMVEAIEYPEWADQYNVMAVPKIVIQVNGEDRVEFEGAYPEKMFLEKLLSALS 226 (226)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEEEEEGGGCHHHHHHTTCCSSCEEEEEETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhcccccCCcEEEEEEEcccCHHHHHhCCCcccCeEEEEeCCceeEEEcCCCCHHHHHHHHHHhhC
Confidence 5689999998885 599999999999999999999999999999999999999999 99999999988753
No 70
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.58 E-value=2.6e-14 Score=74.55 Aligned_cols=67 Identities=19% Similarity=0.283 Sum_probs=60.9
Q ss_pred chHHHHHHHhhCCCcEEEEEeCcCcHHHHHHcCCCccCEEEEEe--CCe--EEeeeeCCCHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPDVVFLKVDVDESEDIAMAYDISSMPTFVFVK--STA--KVEQFSGANFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~--~g~--~~~~~~g~~~~~l~~~i~~~~ 69 (70)
+.|.++++++++ ++.|+.+|++++++++++|+|.++||+++|+ +|+ .+.++.|.+.++|.++|++++
T Consensus 58 ~~p~l~~l~~~~-~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~~~g~g~~~~~~~G~~~~~l~~~l~~~l 128 (133)
T 3cxg_A 58 IKEYFKNQLNYY-YVTLVDIDVDIHPKLNDQHNIKALPTFEFYFNLNNEWVLVHTVEGANQNDIEKAFQKYC 128 (133)
T ss_dssp THHHHHGGGGTE-ECEEEEEETTTCHHHHHHTTCCSSSEEEEEEEETTEEEEEEEEESCCHHHHHHHHHHHS
T ss_pred HHHHHHHHHHhc-CEEEEEEeccchHHHHHhcCCCCCCEEEEEEecCCCeEEEEEEcCCCHHHHHHHHHHHH
Confidence 578899888887 6999999999999999999999999999997 898 889999998889999998765
No 71
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.58 E-value=6.8e-15 Score=74.52 Aligned_cols=69 Identities=17% Similarity=0.329 Sum_probs=62.4
Q ss_pred CchHHHHHHHhhCC----CcEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEE--eeeeCC-CHHHHHHHHHhhc
Q psy11066 1 MSLVMLQELASEFP----DVVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKV--EQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 1 ~~~p~~~~~~~~~~----~i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~--~~~~g~-~~~~l~~~i~~~~ 69 (70)
++.|.++++++.+. ++.++.+|++++++++++|++.++||+++|++|+.+ .++.|. +.+.|.++|++++
T Consensus 41 ~~~~~~~~~~~~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~~~g~~~~~~l~~~l~~~~ 116 (120)
T 1mek_A 41 ALAPEYAKAAGKLKAEGSEIRLAKVDATEESDLAQQYGVRGYPTIKFFRNGDTASPKEYTAGREADDIVNWLKKRT 116 (120)
T ss_dssp TTHHHHHHHHHTTTTTCCCCBCEEEETTTCCSSHHHHTCCSSSEEEEEESSCSSSCEECCCCSSHHHHHHHHHTTS
T ss_pred HhhHHHHHHHHHHhccCCcEEEEEEcCCCCHHHHHHCCCCcccEEEEEeCCCcCCcccccCccCHHHHHHHHHhcc
Confidence 36789999998874 489999999999999999999999999999999987 889999 9999999999875
No 72
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.57 E-value=1.3e-14 Score=69.92 Aligned_cols=65 Identities=22% Similarity=0.405 Sum_probs=58.9
Q ss_pred CchHHHHHHHhhCCC-cEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 1 MSLVMLQELASEFPD-VVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 1 ~~~p~~~~~~~~~~~-i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
++.|.++++++++++ +.+..+|++++++++++|++.++||+++ +|+. ++.|. +.+.|.++|++.+
T Consensus 18 ~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~~--~~~G~~~~~~l~~~l~~~l 84 (85)
T 1nho_A 18 MAIEVVDEAKKEFGDKIDVEKIDIMVDREKAIEYGLMAVPAIAI--NGVV--RFVGAPSREELFEAINDEM 84 (85)
T ss_dssp THHHHHHHHHHHHCSSCCEEEECTTTCGGGGGGTCSSCSSEEEE--TTTE--EEECSSCCHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHhCCceeeCEEEE--CCEE--EEccCCCHHHHHHHHHHHh
Confidence 367899999999874 9999999999999999999999999998 8887 88898 9999999998875
No 73
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.57 E-value=1.2e-14 Score=76.70 Aligned_cols=68 Identities=16% Similarity=0.194 Sum_probs=58.8
Q ss_pred chHHHHHHHhhCCC-cEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEe---------eeeCC-C-HHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPD-VVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVE---------QFSGA-N-FDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~-i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~---------~~~g~-~-~~~l~~~i~~~~ 69 (70)
+.|.++++++++++ +.|+.+|++++++++++|+|.++||+++|++|+.+. ++.|. + .+++.++|++++
T Consensus 41 ~~p~l~~l~~~~~~~v~~~~vd~d~~~~~~~~~~i~~~Pt~~~~~~G~~v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~~ 120 (142)
T 1qgv_A 41 MDEVLYSIAEKVKNFAVIYLVDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVY 120 (142)
T ss_dssp HHHHHHHHHHHHTTTEEEEEEETTTCCTTTTSSCSCSSCEEEEEETTEEEEEECC------CCSCCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCeEEEEEccccCHHHHHHcCCCCCCEEEEEECCcEEEEecCCCCcceeeeecCcHHHHHHHHHHHH
Confidence 67999999999854 999999999999999999999999999999999886 45566 4 788888887654
No 74
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.57 E-value=1.4e-14 Score=69.75 Aligned_cols=65 Identities=29% Similarity=0.426 Sum_probs=58.6
Q ss_pred CchHHHHHHHhhCCC-cEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 1 MSLVMLQELASEFPD-VVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 1 ~~~p~~~~~~~~~~~-i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
++.|.++++++++++ +.+..+|++++++++++|++.++||+++ +|+. ++.|. +.++|.++|++++
T Consensus 19 ~~~~~l~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~~--~~~G~~~~~~l~~~l~~~l 85 (85)
T 1fo5_A 19 AAKRVVEEVANEMPDAVEVEYINVMENPQKAMEYGIMAVPTIVI--NGDV--EFIGAPTKEALVEAIKKRL 85 (85)
T ss_dssp THHHHHHHHHHHCSSSEEEEEEESSSSCCTTTSTTTCCSSEEEE--TTEE--ECCSSSSSHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHcCCceEEEEEECCCCHHHHHHCCCcccCEEEE--CCEE--eeecCCCHHHHHHHHHHhC
Confidence 367899999999984 9999999999999999999999999998 8877 88898 9999999998764
No 75
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=99.56 E-value=2.4e-14 Score=81.46 Aligned_cols=67 Identities=15% Similarity=0.319 Sum_probs=59.3
Q ss_pred chHHHHHHHhhCC---CcEEEEEeCc-----CcHHHHHHcCCC--ccCEEEEEeCCe--EEeeeeCC-CHHHHHHHHHhh
Q psy11066 2 SLVMLQELASEFP---DVVFLKVDVD-----ESEDIAMAYDIS--SMPTFVFVKSTA--KVEQFSGA-NFDKLRSTVLAN 68 (70)
Q Consensus 2 ~~p~~~~~~~~~~---~i~~~~vd~~-----~~~~~~~~~~i~--~~Pt~~~~~~g~--~~~~~~g~-~~~~l~~~i~~~ 68 (70)
|.|.|+++++.+. ++.|++||++ ++++++++|+|+ ++||+++|++|+ ...++.|. +.+.|.+||.+.
T Consensus 38 l~P~~e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V~~~~~PTl~~f~~G~~~~~~~y~G~~~~~~L~~fi~~~ 117 (240)
T 2qc7_A 38 KQDEFKRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKLDKESYPVFYLFRDGDFENPVPYTGAVKVGAIQRWLKGQ 117 (240)
T ss_dssp HHHHHHHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTCCGGGCSEEEEEETTCSSCCEECCSCSCHHHHHHHHHHT
T ss_pred chHHHHHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCCCCCCCCEEEEEeCCCcCcceeecCCCCHHHHHHHHHHh
Confidence 5799999999873 4999999954 589999999999 999999999998 47788998 999999999876
No 76
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.56 E-value=2.6e-14 Score=86.79 Aligned_cols=68 Identities=18% Similarity=0.281 Sum_probs=64.4
Q ss_pred chHHHHHHHhhCCC-cEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPD-VVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~-i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
+.|.|+++++.+++ +.++.||++++++++++|+|.++||+++|++|+.+.++.|. +.+.|.+|+.+.+
T Consensus 39 ~~p~~~~~a~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Ptl~~~~~g~~~~~~~G~~~~~~l~~~~~~~~ 108 (481)
T 3f8u_A 39 LAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQA 108 (481)
T ss_dssp HHHHHHHHHHHTTTTCCEEEEETTTCHHHHHHTTCCEESEEEEEETTEEEEECCSCSSHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHhcCceEEEEEECCCCHHHHHhcCCCCCCEEEEEeCCceeeeecCccCHHHHHHHHHhhc
Confidence 67999999999987 99999999999999999999999999999999999999999 9999999998765
No 77
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.55 E-value=2.1e-14 Score=82.08 Aligned_cols=67 Identities=18% Similarity=0.324 Sum_probs=59.3
Q ss_pred chHHHHHHHhhC----CCcEEEEEeCcC-----cHHHHHHcCCC--ccCEEEEEeCCeE--Eeee--eCC-CHHHHHHHH
Q psy11066 2 SLVMLQELASEF----PDVVFLKVDVDE-----SEDIAMAYDIS--SMPTFVFVKSTAK--VEQF--SGA-NFDKLRSTV 65 (70)
Q Consensus 2 ~~p~~~~~~~~~----~~i~~~~vd~~~-----~~~~~~~~~i~--~~Pt~~~~~~g~~--~~~~--~g~-~~~~l~~~i 65 (70)
|.|.|+++++.+ +++.|++|||++ +++++++|+|+ ++||+++|+ |+. ..++ .|. +.+.|.+||
T Consensus 49 l~P~~e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~~V~~~~~PTl~~F~-G~~~~~~~y~~~G~~~~~~L~~fi 127 (248)
T 2c0g_A 49 KHEAFTAFSKSAHKATKDLLIATVGVKDYGELENKALGDRYKVDDKNFPSIFLFK-GNADEYVQLPSHVDVTLDNLKAFV 127 (248)
T ss_dssp HHHHHHHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHTTCCTTSCCEEEEES-SSSSSEEECCTTSCCCHHHHHHHH
T ss_pred cHHHHHHHHHHHhccCCCeEEEEEECCcccccccHHHHHHhCCCcCCCCeEEEEe-CCcCcceeecccCCCCHHHHHHHH
Confidence 579999999987 349999999998 89999999999 999999999 873 5667 788 999999999
Q ss_pred Hhhc
Q psy11066 66 LANR 69 (70)
Q Consensus 66 ~~~~ 69 (70)
.+++
T Consensus 128 ~~~~ 131 (248)
T 2c0g_A 128 SANT 131 (248)
T ss_dssp HHHS
T ss_pred HHhh
Confidence 8764
No 78
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.55 E-value=1.7e-15 Score=78.03 Aligned_cols=69 Identities=39% Similarity=0.704 Sum_probs=63.3
Q ss_pred CchHHHHHHHhhCCCcEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCCCHHHHHHHHHhhc
Q psy11066 1 MSLVMLQELASEFPDVVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGANFDKLRSTVLANR 69 (70)
Q Consensus 1 ~~~p~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~l~~~i~~~~ 69 (70)
.+.|.+++++++++++.++.+|++++++++++|++.++||++++++|+.+.++.|.+.+.|.++|++++
T Consensus 53 ~~~~~l~~~~~~~~~v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~l~~~l~~~~ 121 (130)
T 1wmj_A 53 FIAPVFAEYAKKFPGAVFLKVDVDELKEVAEKYNVEAMPTFLFIKDGAEADKVVGARKDDLQNTIVKHV 121 (130)
T ss_dssp SSHHHHHHHHHHCTTBCCEECCTTTSGGGHHHHTCCSSCCCCBCTTTTCCBCCCTTCTTTHHHHHHHHT
T ss_pred HHHHHHHHHHHHCCCCEEEEEeccchHHHHHHcCCCccceEEEEeCCeEEEEEeCCCHHHHHHHHHHHH
Confidence 367899999999988999999999999999999999999999999999999999987788999998765
No 79
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.54 E-value=1.4e-14 Score=74.03 Aligned_cols=68 Identities=12% Similarity=0.065 Sum_probs=59.4
Q ss_pred chHHHHHHHhhCCC-cEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-----CHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPD-VVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-----NFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~-i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-----~~~~l~~~i~~~~ 69 (70)
+.|.++++++++++ +.|+.+|++++++++++|+|.++||+++|++|..+.++.|. +.+.|.++|++.+
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l 112 (122)
T 3aps_A 39 FAPEFELLARMIKGKVRAGKVDCQAYPQTCQKAGIKAYPSVKLYQYERAKKSIWEEQINSRDAKTIAALIYGKL 112 (122)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEEEEGGGTEEEEEEECCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCeEEEEEeCcCCHHHHHHcCCCccceEEEEeCCCccceeeccccCcCCHHHHHHHHHHHH
Confidence 57899999999874 99999999999999999999999999999776667777763 8899999998764
No 80
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.53 E-value=1.8e-14 Score=80.87 Aligned_cols=66 Identities=20% Similarity=0.274 Sum_probs=60.9
Q ss_pred chHHHHHHHhhCCCcEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CH-------HHHHHHHHhh
Q psy11066 2 SLVMLQELASEFPDVVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NF-------DKLRSTVLAN 68 (70)
Q Consensus 2 ~~p~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~-------~~l~~~i~~~ 68 (70)
+.|.|++++++|+++.|++||++ +++++.+|+|.++||+++|++|+.+.++.|. +. +.|..+|.++
T Consensus 138 l~p~l~~la~~~~~v~f~~vd~~-~~~l~~~~~i~~~PTl~~~~~G~~v~~~~G~~~~~g~~~~~~~Le~~L~~~ 211 (217)
T 2trc_P 138 LNSSLECLAAEYPMVKFCKIRAS-NTGAGDRFSSDVLPTLLVYKGGELISNFISVAEQFAEDFFAADVESFLNEY 211 (217)
T ss_dssp HHHHHHHHHTTCTTSEEEEEEHH-HHTCSTTSCGGGCSEEEEEETTEEEEEETTGGGGSCSSCCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHCCCeEEEEEECC-cHHHHHHCCCCCCCEEEEEECCEEEEEEeCCcccCcccCCHHHHHHHHHHc
Confidence 67999999999988999999999 7889999999999999999999999999998 64 8899999875
No 81
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.52 E-value=5.6e-14 Score=73.48 Aligned_cols=64 Identities=23% Similarity=0.322 Sum_probs=58.0
Q ss_pred chHHHHHHHhhCCCcEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC--------CHHHHHHHHHhh
Q psy11066 2 SLVMLQELASEFPDVVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA--------NFDKLRSTVLAN 68 (70)
Q Consensus 2 ~~p~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~--------~~~~l~~~i~~~ 68 (70)
|.|.|++++++++++.|+.||++++. ++|+|.++||+++|++|+.+.++.|. +.+.|+.+|.++
T Consensus 48 ~~p~l~~la~~~~~v~~~~vd~~~~~---~~~~i~~~Pt~~~~~~G~~v~~~~G~~~~~~~~~~~~~l~~~l~~~ 119 (135)
T 2dbc_A 48 VNQHLSVLARKFPETKFVKAIVNSCI---EHYHDNCLPTIFVYKNGQIEGKFIGIIECGGINLKLEELEWKLSEV 119 (135)
T ss_dssp HHHHHHHHHHHCSSEEEEEECCSSSC---SSCCSSCCSEEEEESSSSCSEEEESTTTTTCTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCcEEEEEEhhcCc---ccCCCCCCCEEEEEECCEEEEEEEeEEeeCCCcCCHHHHHHHHHHc
Confidence 67999999999988999999999875 78999999999999999999999997 478899988865
No 82
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.51 E-value=3.2e-15 Score=78.07 Aligned_cols=66 Identities=18% Similarity=0.293 Sum_probs=58.3
Q ss_pred CchHHHHHHHhhCC--CcEEEEEeCcCcHHHHHHcCCC------ccCEEEEEeCCeEEeeeeCC-CHHHHHHHHH
Q psy11066 1 MSLVMLQELASEFP--DVVFLKVDVDESEDIAMAYDIS------SMPTFVFVKSTAKVEQFSGA-NFDKLRSTVL 66 (70)
Q Consensus 1 ~~~p~~~~~~~~~~--~i~~~~vd~~~~~~~~~~~~i~------~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~ 66 (70)
++.|.|++++++++ ++.|+.+|++++++++++|+|. ++||+++|++|+.+.++.|. +.+.|.+++.
T Consensus 43 ~~~p~~~~l~~~~~~~~v~~~~vd~~~~~~~~~~~~v~~~~~~~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~ 117 (137)
T 2dj0_A 43 SFAPIYADLSLKYNCTGLNFGKVDVGRYTDVSTRYKVSTSPLTKQLPTLILFQGGKEAMRRPQIDKKGRAVSWTF 117 (137)
T ss_dssp TTHHHHHHHHHHHCSSSCEEEECCTTTCHHHHHHTTCCCCSSSSCSSEEEEESSSSEEEEESCBCSSSCBCCCCC
T ss_pred HHHHHHHHHHHHhCCCCeEEEEEeCccCHHHHHHccCcccCCcCCCCEEEEEECCEEEEEecCcCchHHHHHHHh
Confidence 46799999999985 4999999999999999999999 99999999999999999998 7666655553
No 83
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.51 E-value=8.4e-14 Score=82.93 Aligned_cols=68 Identities=25% Similarity=0.462 Sum_probs=60.9
Q ss_pred chHHHHHHHhhC------CC-cEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEe-eeeCC-CHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEF------PD-VVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVE-QFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~------~~-i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~-~~~g~-~~~~l~~~i~~~~ 69 (70)
+.|.|+++++.+ .+ +.++.||++++.+++++|+|.++||+++|++|+.+. .+.|. +.+.|.+|+.+.+
T Consensus 40 ~~p~~~~~a~~~~~~~~~~~~v~~~~Vd~~~~~~l~~~~~v~~~Pt~~~f~~G~~~~~~~~G~~~~~~l~~~i~~~~ 116 (382)
T 2r2j_A 40 LHPIFEEASDVIKEEFPNENQVVFARVDCDQHSDIAQRYRISKYPTLKLFRNGMMMKREYRGQRSVKALADYIRQQK 116 (382)
T ss_dssp HHHHHHHHHHHHTTCC---CCEEEEEEETTTCHHHHHHTTCCEESEEEEEETTEEEEEECCSCCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCCCCceEEEEEECCccHHHHHhcCCCcCCEEEEEeCCcEeeeeecCcchHHHHHHHHHHhc
Confidence 679999999876 23 999999999999999999999999999999999887 48999 9999999998764
No 84
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.51 E-value=1.2e-13 Score=82.11 Aligned_cols=65 Identities=18% Similarity=0.261 Sum_probs=58.6
Q ss_pred HHHHHHHhhCC--CcEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 4 VMLQELASEFP--DVVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 4 p~~~~~~~~~~--~i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
|.++++++.+. ++.+++|||++++++|++|+|+++||+++|++|+.+ .+.|. +.+.|.+|+.+.+
T Consensus 56 p~~e~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~V~~~PTl~~f~~G~~~-~y~G~~~~~~i~~~i~~~~ 123 (367)
T 3us3_A 56 LILELAAQVLEDKGVGFGLVDSEKDAAVAKKLGLTEEDSIYVFKEDEVI-EYDGEFSADTLVEFLLDVL 123 (367)
T ss_dssp HHHHHHHHHHTTTTEEEEEEETTTTHHHHHHHTCCSTTEEEEEETTEEE-ECCSCCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCCceEEEEeCcccHHHHHHcCCCcCceEEEEECCcEE-EeCCCCCHHHHHHHHHHhc
Confidence 68899998764 399999999999999999999999999999999875 78898 9999999998764
No 85
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.51 E-value=1e-13 Score=77.43 Aligned_cols=67 Identities=19% Similarity=0.354 Sum_probs=60.3
Q ss_pred chHHHHHHHhhC----CCcEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEF----PDVVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~----~~i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
+.|.++++++++ +++.++.+|++++++++++|+|.++||+++|++|+.+. +.|. +.+.|.+||.+.+
T Consensus 165 ~~p~~~~~a~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~~~-~~g~~~~~~l~~~l~~~~ 236 (241)
T 3idv_A 165 LAPEYEKAAKELSKRSPPIPLAKVDATAETDLAKRFDVSGYPTLKIFRKGRPYD-YNGPREKYGIVDYMIEQS 236 (241)
T ss_dssp THHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEE-CCSCCSHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHhccCCcEEEEEEECCCCHHHHHHcCCcccCEEEEEECCeEEE-ecCCCCHHHHHHHHHhhh
Confidence 578999998875 23999999999999999999999999999999998877 8898 9999999998765
No 86
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.24 E-value=1.9e-15 Score=75.05 Aligned_cols=68 Identities=31% Similarity=0.500 Sum_probs=61.7
Q ss_pred chHHHHHHHhhCCC-cEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPD-VVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~-i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
+.|.++++++++++ +.++.+|++++++++++|++.++||+++|++|+.+.++.|. +.+.+.++|++++
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~l~~~l 106 (106)
T 2yj7_A 37 IAPIIEELAKEYEGKVKVVKVNVDENPNTAAQYGIRSIPTLLLFKNGQVVDRLVGAQPKEALKERIDKHL 106 (106)
Confidence 56788899988874 99999999999999999999999999999999999999999 8999999998753
No 87
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.48 E-value=2.3e-13 Score=80.22 Aligned_cols=66 Identities=20% Similarity=0.273 Sum_probs=58.9
Q ss_pred hHHHHHHHhhCC--CcEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 3 LVMLQELASEFP--DVVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 3 ~p~~~~~~~~~~--~i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
.|+|+++++.+. ++.+++||++++++++++|+|+++||+++|++|+ ..++.|. +.+.|.+|+.+.+
T Consensus 53 ~~~~~~~a~~~~~~~v~~~~Vd~~~~~~l~~~~~v~~~Pt~~~~~~g~-~~~~~G~~~~~~l~~~i~~~~ 121 (350)
T 1sji_A 53 EIVLELVAQVLEHKDIGFVMVDAKKEAKLAKKLGFDEEGSLYVLKGDR-TIEFDGEFAADVLVEFLLDLI 121 (350)
T ss_dssp HHHHHHHHHHGGGSSEEEEEEETTTTHHHHHHHTCCSTTEEEEEETTE-EEEECSCCCHHHHHHHHHTTS
T ss_pred hHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHhcCCCccceEEEEECCc-EEEecCCCCHHHHHHHHHHhc
Confidence 344999998875 4999999999999999999999999999999998 5688999 9999999998764
No 88
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.48 E-value=3.3e-13 Score=82.45 Aligned_cols=68 Identities=13% Similarity=0.310 Sum_probs=63.0
Q ss_pred chHHHHHHHhhCCC--cEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeE--EeeeeCC-CHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPD--VVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAK--VEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~--i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~--~~~~~g~-~~~~l~~~i~~~~ 69 (70)
+.|.|+++++.+++ +.++.||++++++++++|+|.++||+++|++|+. +.++.|. +.+.|.+|+.+.+
T Consensus 49 ~~p~~~~~a~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~l~~~~ 121 (504)
T 2b5e_A 49 MAPEYVKAAETLVEKNITLAQIDCTENQDLCMEHNIPGFPSLKIFKNSDVNNSIDYEGPRTAEAIVQFMIKQS 121 (504)
T ss_dssp HHHHHHHHHHHTTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEETTCTTCEEECCSCCSHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHhccCCeEEEEEECCCCHHHHHhcCCCcCCEEEEEeCCccccceeecCCCCHHHHHHHHHHhc
Confidence 67999999999864 9999999999999999999999999999999987 8899999 9999999998764
No 89
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.48 E-value=1.1e-13 Score=71.35 Aligned_cols=54 Identities=13% Similarity=0.232 Sum_probs=48.6
Q ss_pred cEEEEEeCcCc--HHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 16 VVFLKVDVDES--EDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 16 i~~~~vd~~~~--~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
+.+.++|++++ ++++.+|+|.++||+++|++|+++.|+.|+ +.+.|..+|++.+
T Consensus 53 ~~l~~vdv~~~~~~~la~~~~V~g~PT~i~f~~G~ev~Ri~G~~~~~~f~~~L~~~l 109 (116)
T 3dml_A 53 APVQRLQMRDPLPPGLELARPVTFTPTFVLMAGDVESGRLEGYPGEDFFWPMLARLI 109 (116)
T ss_dssp SCEEEEETTSCCCTTCBCSSCCCSSSEEEEEETTEEEEEEECCCCHHHHHHHHHHHH
T ss_pred ceEEEEECCCCCchhHHHHCCCCCCCEEEEEECCEEEeeecCCCCHHHHHHHHHHHH
Confidence 56888888875 578999999999999999999999999999 9999999998764
No 90
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.47 E-value=1.4e-13 Score=71.62 Aligned_cols=67 Identities=12% Similarity=0.264 Sum_probs=59.1
Q ss_pred chHHH---HHHHhhCCCcEEEEEeC----cCcHHHHHHcCCCccCEEEEE-eCCeEE--eeeeCC-CHHHHHHHHHhh
Q psy11066 2 SLVML---QELASEFPDVVFLKVDV----DESEDIAMAYDISSMPTFVFV-KSTAKV--EQFSGA-NFDKLRSTVLAN 68 (70)
Q Consensus 2 ~~p~~---~~~~~~~~~i~~~~vd~----~~~~~~~~~~~i~~~Pt~~~~-~~g~~~--~~~~g~-~~~~l~~~i~~~ 68 (70)
+.|.+ +++++.++++.++.+|+ +...+++++|+|.++||+++| ++|+.+ .++.|. +.++|.++|++.
T Consensus 49 ~~~~~~~~~~l~~~~~~~~~~~vd~~~~~~~~~~l~~~~~v~~~Pt~~~~d~~G~~v~~~~~~G~~~~~~l~~~l~~~ 126 (134)
T 2fwh_A 49 FEKYTFSDPQVQKALADTVLLQANVTANDAQDVALLKHLNVLGLPTILFFDGQGQEHPQARVTGFMDAETFSAHLRDR 126 (134)
T ss_dssp HHHHTTTSHHHHHHTTTSEEEEEECTTCCHHHHHHHHHTTCCSSSEEEEECTTSCBCGGGCBCSCCCHHHHHHHHHHC
T ss_pred HHHHhcCCHHHHHHhcCcEEEEEeCCCCcchHHHHHHHcCCCCCCEEEEECCCCCEeeeeeeeeccCHHHHHHHHHhc
Confidence 45666 78888888899999999 567889999999999999999 899988 799999 999999999865
No 91
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.47 E-value=2.2e-13 Score=76.00 Aligned_cols=67 Identities=13% Similarity=0.077 Sum_probs=58.4
Q ss_pred chHHHHHHHhhC--CC-cEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhh
Q psy11066 2 SLVMLQELASEF--PD-VVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLAN 68 (70)
Q Consensus 2 ~~p~~~~~~~~~--~~-i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~ 68 (70)
+.|.++++++++ .+ +.++++|++++++++++|+|+++||+++|++|+...++.|. +...+.+++...
T Consensus 43 ~~~~~~~~a~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Ptl~~~~~~~~~~~~~G~~~~~~l~~~~~~~ 113 (229)
T 2ywm_A 43 LLKETVEVIGEAVGQDKIKLDIYSPFTHKEETEKYGVDRVPTIVIEGDKDYGIRYIGLPAGLEFTTLINGI 113 (229)
T ss_dssp HHHHHHHHHHHHHCTTTEEEEEECTTTCHHHHHHTTCCBSSEEEEESSSCCCEEEESCCCTTHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCCceEEEEecCcccHHHHHHcCCCcCcEEEEECCCcccceecCCccHHHHHHHHHHH
Confidence 567788887665 44 99999999999999999999999999999988888999999 888888888764
No 92
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.47 E-value=4.8e-13 Score=74.38 Aligned_cols=67 Identities=16% Similarity=0.228 Sum_probs=59.3
Q ss_pred chHHHHHHHhhCCCcEEEEEeCcC--cHHHHHHcCCCccCEEEEEeCCeEE-eeeeCC-CHHHHHHHHHhh
Q psy11066 2 SLVMLQELASEFPDVVFLKVDVDE--SEDIAMAYDISSMPTFVFVKSTAKV-EQFSGA-NFDKLRSTVLAN 68 (70)
Q Consensus 2 ~~p~~~~~~~~~~~i~~~~vd~~~--~~~~~~~~~i~~~Pt~~~~~~g~~~-~~~~g~-~~~~l~~~i~~~ 68 (70)
+.|.++++++..+++.++.+|+++ +++++++|+|.++||+++|++|+.. .++.|. +...+.+++...
T Consensus 41 ~~~~~~~la~~~~~v~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~~G~~~~~~l~~~l~~~ 111 (226)
T 1a8l_A 41 LKQLVQELSELTDKLSYEIVDFDTPEGKELAKRYRIDRAPATTITQDGKDFGVRYFGLPAGHEFAAFLEDI 111 (226)
T ss_dssp HHHHHHHHHTTCTTEEEEEEETTSHHHHHHHHHTTCCSSSEEEEEETTBCCSEEEESCCCTTHHHHHHHHH
T ss_pred HHHHHHHHHhhCCceEEEEEeCCCcccHHHHHHcCCCcCceEEEEcCCceeeEEEeccCcHHHHHHHHHHH
Confidence 678999999876669999999999 9999999999999999999999875 788898 888888887764
No 93
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.46 E-value=3.7e-13 Score=75.19 Aligned_cols=67 Identities=19% Similarity=0.333 Sum_probs=59.6
Q ss_pred chHHHHHHHhhCCC----cEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPD----VVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~----i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
+.|.|+++++++++ +.++.+|++++++++++|+|.++||+++|++|+.+ ++.|. +.+.|.+++.+..
T Consensus 50 ~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~~-~~~g~~~~~~l~~~i~~~~ 121 (241)
T 3idv_A 50 FAPEYEKIANILKDKDPPIPVAKIDATSASVLASRFDVSGYPTIKILKKGQAV-DYEGSRTQEEIVAKVREVS 121 (241)
T ss_dssp HHHHHHHHHHHHHTSSSCCCEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEE-ECCSCSCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHhhcCCceEEEEEeccCCHHHHHhcCCCcCCEEEEEcCCCcc-cccCcccHHHHHHHHhhcc
Confidence 57899999987642 99999999999999999999999999999999888 58888 9999999998754
No 94
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.46 E-value=6.6e-14 Score=71.30 Aligned_cols=65 Identities=12% Similarity=0.234 Sum_probs=53.5
Q ss_pred chHHHHHHHhhCCC-cEEEEEeC----cCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHH
Q psy11066 2 SLVMLQELASEFPD-VVFLKVDV----DESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVL 66 (70)
Q Consensus 2 ~~p~~~~~~~~~~~-i~~~~vd~----~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~ 66 (70)
+.|.+++++++++. +.++.++. ++.++++++|+|.++||+++|++|+.+.++.|. +.+.|.++|+
T Consensus 47 ~~p~l~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~ 117 (118)
T 1zma_A 47 FAGTLSGVVAETKAHIYFINSEEPSQLNDLQAFRSRYGIPTVPGFVHITDGQINVRCDSSMSAQEIKDFAG 117 (118)
T ss_dssp HHHHHHHHHHHHCCCCEEEETTCGGGHHHHHHHHHHHTCCSSCEEEEEETTEEEEECCTTCCHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCeEEEEECCCcCcHHHHHHHHHHcCCCCCCeEEEEECCEEEEEecCCCCHHHHHHHhh
Confidence 57899999988753 65554332 234578899999999999999999999999999 9999999986
No 95
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.45 E-value=3e-13 Score=70.01 Aligned_cols=68 Identities=16% Similarity=0.155 Sum_probs=60.9
Q ss_pred chHHHH--HHHhhCC-CcEEEEEeC---cCcHHHHHHcCC---CccCEEEEE-eCCeEEeeeeC-------C-CHHHHHH
Q psy11066 2 SLVMLQ--ELASEFP-DVVFLKVDV---DESEDIAMAYDI---SSMPTFVFV-KSTAKVEQFSG-------A-NFDKLRS 63 (70)
Q Consensus 2 ~~p~~~--~~~~~~~-~i~~~~vd~---~~~~~~~~~~~i---~~~Pt~~~~-~~g~~~~~~~g-------~-~~~~l~~ 63 (70)
+.|.|+ ++.+.+. ++.++.+|+ +++.+++++|+| .++||+++| ++|+.+.+..| . +.+++.+
T Consensus 47 ~~~~l~~~~~~~~~~~~~~~~~vd~~~~~~~~~l~~~~~v~~~~~~Pt~~~~d~~G~~~~~~~g~~~~~~~~~~~~~l~~ 126 (133)
T 3fk8_A 47 LDKSLRNQKNTALIAKHFEVVKIDVGNFDRNLELSQAYGDPIQDGIPAVVVVNSDGKVRYTTKGGELANARKMSDQGIYD 126 (133)
T ss_dssp HHHHHTSHHHHHHHHHHCEEEEEECTTTTSSHHHHHHTTCGGGGCSSEEEEECTTSCEEEECCSCTTTTGGGSCHHHHHH
T ss_pred HHHHhCCHHHHHHhcCCEEEEEEeCCcccchHHHHHHhCCccCCccceEEEECCCCCEEEEecCCcccccccCCHHHHHH
Confidence 568888 8888874 499999999 899999999999 999999999 89999999999 6 8899999
Q ss_pred HHHhhc
Q psy11066 64 TVLANR 69 (70)
Q Consensus 64 ~i~~~~ 69 (70)
+|+++.
T Consensus 127 ~l~~l~ 132 (133)
T 3fk8_A 127 FFAKIT 132 (133)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 998764
No 96
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.43 E-value=1.4e-13 Score=87.45 Aligned_cols=68 Identities=13% Similarity=0.216 Sum_probs=55.9
Q ss_pred chHHHHHHHhhCCC-cEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPD-VVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~-i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
+.|.|+++++.+.+ +.+++||++++++++++|+|.++||+++|++|+.+.++.|. +.+.|.+|+.+.+
T Consensus 151 ~~p~~~~~a~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~~~~~~G~~~~~~l~~~l~~~~ 220 (780)
T 3apo_A 151 LAPTWREFAKEVDGLLRIGAVNCGDDRMLCRMKGVNSYPSLFIFRSGMAAVKYNGDRSKESLVAFAMQHV 220 (780)
T ss_dssp HHHHHHHHHHHTTTTSEEEEEETTTCSSCC--------CEEEEECTTSCCEECCSCSCHHHHHHHHHTTS
T ss_pred hhHHHHHHHHHhcCceEEEEEeCCCcHHHHHHcCCceeeeEEEEeCCcEeeEecCCCCHHHHHHHHHHhc
Confidence 68999999999876 99999999999999999999999999999999999999999 9999999998764
No 97
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.43 E-value=2.5e-13 Score=77.49 Aligned_cols=66 Identities=20% Similarity=0.258 Sum_probs=58.7
Q ss_pred chHHHHHHHhhCCCcEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-C-------HHHHHHHHHhh
Q psy11066 2 SLVMLQELASEFPDVVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-N-------FDKLRSTVLAN 68 (70)
Q Consensus 2 ~~p~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~-------~~~l~~~i~~~ 68 (70)
+.|.|++++++|++++|++||+++ .+++..|+|.++||+++|++|+.+.++.|. . .+.|..+|.++
T Consensus 151 l~p~l~~La~~~~~v~f~kVd~d~-~~l~~~~~I~~~PTll~~~~G~~v~~~vG~~~~~g~~~~~e~Le~~L~~~ 224 (245)
T 1a0r_P 151 LNSSLICLAAEYPMVKFCKIKASN-TGAGDRFSSDVLPTLLVYKGGELLSNFISVTEQLAEEFFTGDVESFLNEY 224 (245)
T ss_dssp HHHHHHHHHHHCTTSEEEEEEHHH-HCCTTSSCTTTCSEEEEEETTEEEEEETTGGGGSCTTCCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHCCCCEEEEEeCCc-HHHHHHCCCCCCCEEEEEECCEEEEEEeCCcccccccccHHHHHHHHHHc
Confidence 679999999999999999999987 778999999999999999999999999986 3 34688888765
No 98
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.43 E-value=1.5e-12 Score=75.72 Aligned_cols=68 Identities=19% Similarity=0.352 Sum_probs=60.9
Q ss_pred chHHHHHHHhhCCC-cEEEEEeCc--CcHHHHHHcCCCccCEEEEEeCCe-----------------EEeeeeCC-CHHH
Q psy11066 2 SLVMLQELASEFPD-VVFLKVDVD--ESEDIAMAYDISSMPTFVFVKSTA-----------------KVEQFSGA-NFDK 60 (70)
Q Consensus 2 ~~p~~~~~~~~~~~-i~~~~vd~~--~~~~~~~~~~i~~~Pt~~~~~~g~-----------------~~~~~~g~-~~~~ 60 (70)
+.|.|+++++++++ +.++.+|++ ++.+++++|+|.++||+++|++|+ ....+.|. +.+.
T Consensus 53 ~~p~~~~la~~~~~~~~~~~v~~d~~~~~~l~~~~~I~~~Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~ 132 (298)
T 3ed3_A 53 LSSTFRKAAKRLDGVVQVAAVNCDLNKNKALCAKYDVNGFPTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAP 132 (298)
T ss_dssp HHHHHHHHHHHTTTTSEEEEEETTSTTTHHHHHHTTCCBSSEEEEEECCCC-------------CCCEEEECCSCCSHHH
T ss_pred HHHHHHHHHHHccCCcEEEEEEccCccCHHHHHhCCCCccceEEEEECCceeecccccccccccccccceeecCCcCHHH
Confidence 67999999999976 899999988 689999999999999999999887 46788899 9999
Q ss_pred HHHHHHhhc
Q psy11066 61 LRSTVLANR 69 (70)
Q Consensus 61 l~~~i~~~~ 69 (70)
|.+|+.+.+
T Consensus 133 i~~fl~~~~ 141 (298)
T 3ed3_A 133 IVDFSLSRI 141 (298)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHHhc
Confidence 999998764
No 99
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.43 E-value=5.3e-13 Score=68.63 Aligned_cols=66 Identities=14% Similarity=0.198 Sum_probs=57.3
Q ss_pred chHHHHHHHhhCC-CcEEEEEeC-------cCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCCCHHHHHHHHHh
Q psy11066 2 SLVMLQELASEFP-DVVFLKVDV-------DESEDIAMAYDISSMPTFVFVKSTAKVEQFSGANFDKLRSTVLA 67 (70)
Q Consensus 2 ~~p~~~~~~~~~~-~i~~~~vd~-------~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~l~~~i~~ 67 (70)
+.|.+++++++++ ++.|+.+|+ +.+.+++++|+|.++||+++|++|..+....|.+.+.|.++|.+
T Consensus 49 ~~p~l~~~~~~~~~~~~~~~vd~~~~~~~~d~~~~~~~~~~i~~~Pt~~~~~~~~~~~g~~~~~~~~l~~~i~~ 122 (123)
T 1wou_A 49 AEPVVREGLKHISEGCVFIYCQVGEKPYWKDPNNDFRKNLKVTAVPTLLKYGTPQKLVESECLQANLVEMLFSE 122 (123)
T ss_dssp HHHHHHHHGGGCCTTEEEEEEECCCHHHHHCTTCHHHHHHCCCSSSEEEETTSSCEEEGGGGGCHHHHHHHHHC
T ss_pred hhHHHHHHHHHcCCCcEEEEEECCCchhhhchhHHHHHHCCCCeeCEEEEEcCCceEeccccCCHHHHHHHHhc
Confidence 5799999999996 599999999 78899999999999999999988777666666678889988864
No 100
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.41 E-value=1.5e-13 Score=71.07 Aligned_cols=68 Identities=21% Similarity=0.386 Sum_probs=58.2
Q ss_pred chHHHHHHHhhCC---CcEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEe--eee-CC-CHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFP---DVVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVE--QFS-GA-NFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~---~i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~--~~~-g~-~~~~l~~~i~~~~ 69 (70)
+.|.|+++++++. ++.++.+|+++++.++++|+|.++||+++|++|..+. ++. |. +.+.|.++|++++
T Consensus 43 ~~p~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~~~gg~~~~~~l~~~l~~~~ 117 (133)
T 2dj3_A 43 LEPIYTSLGKKYKGQKDLVIAKMDATANDITNDQYKVEGFPTIYFAPSGDKKNPIKFEGGNRDLEHLSKFIDEHA 117 (133)
T ss_dssp HHHHHHHHHHHHTTSSSEEEEEECTTTSCCCCSSCCCSSSSEEEEECTTCTTSCEECCSSCCSTTHHHHHHHHHS
T ss_pred HHHHHHHHHHHhcCCCCEEEEEecCCcCHHHHhhcCCCcCCEEEEEeCCCcccceEecCCCcCHHHHHHHHHHhc
Confidence 6789999999875 4999999999999999999999999999998876543 455 65 8899999998765
No 101
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.41 E-value=1.5e-12 Score=72.56 Aligned_cols=65 Identities=22% Similarity=0.336 Sum_probs=59.0
Q ss_pred chHHHHHHHhhCCCcEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPDVVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
+.|.+++++++++++.++.+|++++++++++|+|.++||+++ +|+ +.++.|. +.+.|.++|.+.+
T Consensus 154 ~~~~~~~~~~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~--~G~-~~~~~G~~~~~~l~~~l~~~~ 219 (229)
T 2ywm_A 154 AAVMAWDFALANDYITSKVIDASENQDLAEQFQVVGVPKIVI--NKG-VAEFVGAQPENAFLGYIMAVY 219 (229)
T ss_dssp HHHHHHHHHHHCTTEEEEEEEGGGCHHHHHHTTCCSSSEEEE--GGG-TEEEESCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCeEEEEEECCCCHHHHHHcCCcccCEEEE--CCE-EEEeeCCCCHHHHHHHHHHHh
Confidence 568999999999779999999999999999999999999998 888 6779999 9999999998764
No 102
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.40 E-value=1.2e-12 Score=67.31 Aligned_cols=68 Identities=25% Similarity=0.369 Sum_probs=56.7
Q ss_pred chHHH---HHHHhhCC-CcEEEEEeCc--CcHHHHHHcCCCccCEEEEE-eCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 2 SLVML---QELASEFP-DVVFLKVDVD--ESEDIAMAYDISSMPTFVFV-KSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~---~~~~~~~~-~i~~~~vd~~--~~~~~~~~~~i~~~Pt~~~~-~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
+.|.+ +.+.+.+. ++.++.+|++ ....++++|++.++||++++ ++|+.+.++.|. +.+.|.++|++++
T Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~G~~~~~~~G~~~~~~l~~~l~~~~ 120 (130)
T 2kuc_A 45 LSKVVFKDSLVADYFNRHFVNLKMDMEKGEGVELRKKYGVHAYPTLLFINSSGEVVYRLVGAEDAPELLKKVKLGV 120 (130)
T ss_dssp HHHHGGGCHHHHHHHHHHSEEEEECSSSTTHHHHHHHTTCCSSCEEEEECTTSCEEEEEESCCCHHHHHHHHHHHH
T ss_pred HHHHhcCcHHHHHHHhcCeEEEEEecCCcchHHHHHHcCCCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHH
Confidence 34555 55555543 3889999998 57889999999999999999 799999999999 9999999998875
No 103
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.40 E-value=9e-13 Score=67.50 Aligned_cols=63 Identities=17% Similarity=0.174 Sum_probs=53.8
Q ss_pred chHHHHHHHhhCCCcEEEEEeCcCcHH----HHHHcCCC-ccCEEEEEeCCeEEeeee-CC-CHHHHHHHH
Q psy11066 2 SLVMLQELASEFPDVVFLKVDVDESED----IAMAYDIS-SMPTFVFVKSTAKVEQFS-GA-NFDKLRSTV 65 (70)
Q Consensus 2 ~~p~~~~~~~~~~~i~~~~vd~~~~~~----~~~~~~i~-~~Pt~~~~~~g~~~~~~~-g~-~~~~l~~~i 65 (70)
+.|.|++++++ +++.++++|++++++ ++++|+|+ ..||+++|++|+.+++.. +. +.+.|.+.+
T Consensus 42 ~~~~~e~~~~~-~~v~~~~vdVde~r~~Sn~IA~~~~V~h~sPq~il~k~G~~v~~~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 42 AYDQFNKFLYE-RDMDGYYLIVQQERDLSDYIAKKTNVKHESPQAFYFVNGEMVWNRDHGDINVSSLAQAE 111 (112)
T ss_dssp HHHHHHHHHHH-HTCCEEEEEGGGGHHHHHHHHHHHTCCCCSSEEEEEETTEEEEEEEGGGCSHHHHHHHT
T ss_pred HHHHHHHHhcc-CCceEEEEEeecCchhhHHHHHHhCCccCCCeEEEEECCEEEEEeeccccCHHHHHHhh
Confidence 57899999886 679999999999977 79999999 599999999999998855 44 888877654
No 104
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.37 E-value=9.9e-13 Score=66.88 Aligned_cols=65 Identities=25% Similarity=0.372 Sum_probs=55.9
Q ss_pred chHHHHHHHhhCC------CcEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeE--EeeeeCC-CHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFP------DVVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAK--VEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~------~i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~--~~~~~g~-~~~~l~~~i~~~~ 69 (70)
+.|.|++++++++ ++.|+.+|+++++ +++ +|.++||+++|++|.. +.++.|. +.+.|.++|++++
T Consensus 43 ~~p~~~~~~~~~~~~~~~~~v~~~~vd~~~~~-~~~--~v~~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~i~~~~ 116 (121)
T 2djj_A 43 LAPKYEELGALYAKSEFKDRVVIAKVDATAND-VPD--EIQGFPTIKLYPAGAKGQPVTYSGSRTVEDLIKFIAENG 116 (121)
T ss_dssp HHHHHHHHHHHHTTSSCTTSSEEEEEETTTSC-CSS--CCSSSSEEEEECSSCTTSCCCCCCCSCHHHHHHHHHHTS
T ss_pred hhHHHHHHHHHHhhcccCCceEEEEEECcccc-ccc--ccCcCCeEEEEeCcCCCCceEecCCCCHHHHHHHHHhcc
Confidence 6789999998875 4999999999876 555 9999999999987754 7889999 9999999999875
No 105
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.35 E-value=1.5e-11 Score=63.23 Aligned_cols=67 Identities=24% Similarity=0.325 Sum_probs=59.3
Q ss_pred chHHHHHHHhhCCCcEEEEEeCcC----------------------cHHHHHHcCCCccCEEEEE-eCCeEEeeee---C
Q psy11066 2 SLVMLQELASEFPDVVFLKVDVDE----------------------SEDIAMAYDISSMPTFVFV-KSTAKVEQFS---G 55 (70)
Q Consensus 2 ~~p~~~~~~~~~~~i~~~~vd~~~----------------------~~~~~~~~~i~~~Pt~~~~-~~g~~~~~~~---g 55 (70)
+.|.+.++.++++++.++.++++. ..++++.|++.++||++++ ++|+.+ ++. |
T Consensus 42 ~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~P~~~lid~~G~i~-~~~~~~g 120 (136)
T 1lu4_A 42 EAPSLSQVAAANPAVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNVPWQPAFVFYRADGTST-FVNNPTA 120 (136)
T ss_dssp HHHHHHHHHHHCTTSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTTCCSSSEEEEECTTSCEE-EECCSSS
T ss_pred HHHHHHHHHHHCCCcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcCCCCCCEEEEECCCCcEE-EEEcCCC
Confidence 467889999999889999999877 6788999999999999999 689988 999 9
Q ss_pred C-CHHHHHHHHHhhc
Q psy11066 56 A-NFDKLRSTVLANR 69 (70)
Q Consensus 56 ~-~~~~l~~~i~~~~ 69 (70)
. +.++|.++|++++
T Consensus 121 ~~~~~~l~~~l~~ll 135 (136)
T 1lu4_A 121 AMSQDELSGRVAALT 135 (136)
T ss_dssp CCCHHHHHHHHHHC-
T ss_pred ccCHHHHHHHHHHHh
Confidence 8 9999999999875
No 106
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.35 E-value=1.1e-11 Score=70.33 Aligned_cols=64 Identities=23% Similarity=0.324 Sum_probs=57.0
Q ss_pred chHHHHHHHhhC-----CCcEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEF-----PDVVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~-----~~i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
+.|.|++++..+ +++.+..+|++++++++++|+|+++||+++ +|+.+ +.|. +.++|.++|.+.+
T Consensus 156 ~~p~l~~la~~~~~~~~~~v~~~~vd~~~~~~~~~~~~V~~vPt~~i--~G~~~--~~G~~~~~~l~~~l~~~~ 225 (243)
T 2hls_A 156 AVLLAHMFAYEAWKQGNPVILSEAVEAYENPDIADKYGVMSVPSIAI--NGYLV--FVGVPYEEDFLDYVKSAA 225 (243)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEEEEETTTCHHHHHHTTCCSSSEEEE--TTEEE--EESCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccccCCcEEEEEEECccCHHHHHHcCCeeeCeEEE--CCEEE--EeCCCCHHHHHHHHHHHh
Confidence 578999999887 569999999999999999999999999988 88764 8898 9999999998765
No 107
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=99.34 E-value=3.6e-12 Score=64.83 Aligned_cols=60 Identities=13% Similarity=0.192 Sum_probs=52.9
Q ss_pred chHHHHHHHhhCCCcEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHH
Q psy11066 2 SLVMLQELASEFPDVVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTV 65 (70)
Q Consensus 2 ~~p~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i 65 (70)
+.|.+++++++++ +.+.++|++++++++++|+++ +||+++|.+|+.+ ..|. +.+.|.++|
T Consensus 46 a~~~L~~l~~e~~-i~~~~vDId~d~~l~~~ygv~-VP~l~~~~dG~~v--~~g~~~~~~L~~~L 106 (107)
T 2fgx_A 46 MIASLRVLQKKSW-FELEVINIDGNEHLTRLYNDR-VPVLFAVNEDKEL--CHYFLDSDVIGAYL 106 (107)
T ss_dssp HHHHHHHHHHHSC-CCCEEEETTTCHHHHHHSTTS-CSEEEETTTTEEE--ECSSCCCHHHHHHH
T ss_pred HHHHHHHHHHhcC-CeEEEEECCCCHHHHHHhCCC-CceEEEEECCEEE--EecCCCHHHHHHHh
Confidence 5688999988885 999999999999999999997 9999999999887 3476 889999887
No 108
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=99.32 E-value=5e-12 Score=62.13 Aligned_cols=59 Identities=17% Similarity=0.257 Sum_probs=49.1
Q ss_pred chHHHHHHHhhCCCcEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPDVVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
+.|.+++++.++ +.++|++++++++++|+++ +||+++ .+|+.+. |. +.+.|.++|.+.+
T Consensus 17 ~~~~L~~~~~~~----~~~vdid~~~~l~~~~g~~-vPtl~~-~~G~~v~---g~~~~~~L~~~l~~~~ 76 (87)
T 1ttz_A 17 AVEALAQARAGA----FFSVFIDDDAALESAYGLR-VPVLRD-PMGRELD---WPFDAPRLRAWLDAAP 76 (87)
T ss_dssp HHHHHHHTTCCC----EEEEECTTCHHHHHHHTTT-CSEEEC-TTCCEEE---SCCCHHHHHHHHHTCC
T ss_pred HHHHHHHHHHhh----eEEEECCCCHHHHHHhCCC-cCeEEE-ECCEEEe---CCCCHHHHHHHHHHHH
Confidence 456666665544 6899999999999999998 999998 8998875 77 9999999998764
No 109
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.31 E-value=1e-11 Score=70.01 Aligned_cols=68 Identities=16% Similarity=0.290 Sum_probs=56.6
Q ss_pred chHHHHHHHhhCC----CcEEEEEeC--cCcHHHHHHcCCCccCEEEEEeCCeEE-----eeeeCCCHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFP----DVVFLKVDV--DESEDIAMAYDISSMPTFVFVKSTAKV-----EQFSGANFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~----~i~~~~vd~--~~~~~~~~~~~i~~~Pt~~~~~~g~~~-----~~~~g~~~~~l~~~i~~~~ 69 (70)
+.|.|++++++++ ++.++.+|+ +++++++++|+|.++||+++|++|+.. .++.|.+.+.|.++|.+++
T Consensus 48 ~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v~~~Pt~~~~~~g~~~~~g~~~~~~g~~~~~l~~~i~~~l 126 (244)
T 3q6o_A 48 FAPTWXALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIPGFPTVRFFXAFTXNGSGAVFPVAGADVQTLRERLIDAL 126 (244)
T ss_dssp HHHHHHHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTCCSSSEEEEECTTCCSSSCEECCCTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCCCccCEEEEEeCCCcCCCCeeEecCCCCHHHHHHHHHHHH
Confidence 6799999999885 499999999 678999999999999999999875332 2566668888998887654
No 110
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=98.98 E-value=1.9e-13 Score=70.46 Aligned_cols=68 Identities=22% Similarity=0.317 Sum_probs=58.2
Q ss_pred chHHH---HHHHhhCCC-cEEEEEeC--cCcHHHHHHcCCCccCEEEEE--eCCeE--EeeeeCC-CHHHHHHHHHhhc
Q psy11066 2 SLVML---QELASEFPD-VVFLKVDV--DESEDIAMAYDISSMPTFVFV--KSTAK--VEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~---~~~~~~~~~-i~~~~vd~--~~~~~~~~~~~i~~~Pt~~~~--~~g~~--~~~~~g~-~~~~l~~~i~~~~ 69 (70)
+.|.+ +++++.+++ +.++.+|+ ++..+++++|+|.++||+++| ++|+. +.++.|. +.+.|.++|++.+
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~~G~~~~~~~~~G~~~~~~l~~~l~~~~ 115 (130)
T 2lst_A 37 MNTFVLSDPGVSRLLEARFVVASVSVDTPEGQELARRYRVPGTPTFVFLVPKAGAWEEVGRLFGSRPRAEFLKELRQVC 115 (130)
Confidence 56777 788887765 88999998 466889999999999999999 67998 8999999 8899999988765
No 111
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.30 E-value=5.3e-11 Score=60.95 Aligned_cols=67 Identities=19% Similarity=0.323 Sum_probs=58.7
Q ss_pred chHHHHHHHhhCCCcEEEEEeCcC-----------------------cHHHHHHcCCCccCEEEEE-eCCeEEeeeeCC-
Q psy11066 2 SLVMLQELASEFPDVVFLKVDVDE-----------------------SEDIAMAYDISSMPTFVFV-KSTAKVEQFSGA- 56 (70)
Q Consensus 2 ~~p~~~~~~~~~~~i~~~~vd~~~-----------------------~~~~~~~~~i~~~Pt~~~~-~~g~~~~~~~g~- 56 (70)
+.|.+.++.++++++.++.++++. ...+++.|++.++||++++ ++|+.+ ++.|.
T Consensus 43 ~~~~l~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~P~~~~id~~g~i~-~~~g~~ 121 (136)
T 1zzo_A 43 EAPVVGQVAASHPEVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVD-VVRGRM 121 (136)
T ss_dssp HHHHHHHHHHHCTTSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCHHHHHTTCCSSSEEEEECTTCCEE-EEESCC
T ss_pred HHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCcHHHHHcCCCCCceEEEECCCCCEE-EEecCC
Confidence 467889999998889999999843 5678999999999999999 689988 99999
Q ss_pred CHHHHHHHHHhhc
Q psy11066 57 NFDKLRSTVLANR 69 (70)
Q Consensus 57 ~~~~l~~~i~~~~ 69 (70)
+.+.|.++|++++
T Consensus 122 ~~~~l~~~l~~~l 134 (136)
T 1zzo_A 122 SQDELTRRVTALT 134 (136)
T ss_dssp CHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHh
Confidence 9999999998875
No 112
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.29 E-value=3.2e-11 Score=62.62 Aligned_cols=68 Identities=15% Similarity=0.274 Sum_probs=59.3
Q ss_pred chHHHHHHHhhCCC-cEEEEEeC---------------------------cCcHHHHHHcCCCccCEEEEE-eCCeEEee
Q psy11066 2 SLVMLQELASEFPD-VVFLKVDV---------------------------DESEDIAMAYDISSMPTFVFV-KSTAKVEQ 52 (70)
Q Consensus 2 ~~p~~~~~~~~~~~-i~~~~vd~---------------------------~~~~~~~~~~~i~~~Pt~~~~-~~g~~~~~ 52 (70)
+.|.+.++.+++++ +.++.+++ +...++++.|++.++||++++ ++|+.+.+
T Consensus 47 ~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 126 (148)
T 2b5x_A 47 AMPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPGKIKETAAEHDITQPIFVDSDHALTDAFENEYVPAYYVFDKTGQLRHF 126 (148)
T ss_dssp HHHHHHHHHHHHTTTSEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCEEECSSCHHHHHTCCCCSSEEEEECTTCBEEEE
T ss_pred HhHHHHHHHHHhcCCcEEEEEEcCCCccccCHHHHHHHHHHcCCCcceEECCchhHHHHhCCCCCCEEEEECCCCcEEEE
Confidence 46788899988876 99999985 445688999999999999999 79999999
Q ss_pred eeCC-CHHHHHHHHHhhc
Q psy11066 53 FSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 53 ~~g~-~~~~l~~~i~~~~ 69 (70)
+.|. +.+.+.++|++.+
T Consensus 127 ~~g~~~~~~l~~~l~~~l 144 (148)
T 2b5x_A 127 QAGGSGMKMLEKRVNRVL 144 (148)
T ss_dssp EESCSTTHHHHHHHHHHH
T ss_pred ecCCCCHHHHHHHHHHHH
Confidence 9998 8999999998875
No 113
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.27 E-value=5.2e-11 Score=75.84 Aligned_cols=67 Identities=16% Similarity=0.252 Sum_probs=61.2
Q ss_pred chHHHHHHHhhCCC-cEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPD-VVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~-i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
+.|.|+++++++.+ +.|+.+|+++++.+++.|+|.++||++++++|+. .++.|. +.+.|.+|+.+.+
T Consensus 473 ~~p~~~~~a~~~~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~-~~~~g~~~~~~l~~fi~~~~ 541 (780)
T 3apo_A 473 LLPELRKASTLLYGQLKVGTLDCTIHEGLCNMYNIQAYPTTVVFNQSSI-HEYEGHHSAEQILEFIEDLR 541 (780)
T ss_dssp HHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEE-EEECSCSCHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHhcCCeEEEEEeCCCCHHHHHHcCCCcCCeEEEEcCCce-eeecCcccHHHHHHHHHhhc
Confidence 57999999999965 9999999999999999999999999999998876 788898 9999999998765
No 114
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.24 E-value=5.3e-11 Score=56.23 Aligned_cols=57 Identities=12% Similarity=0.163 Sum_probs=48.8
Q ss_pred chHHHHHHHhhCCC-cEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC--CHHHHHHHH
Q psy11066 2 SLVMLQELASEFPD-VVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA--NFDKLRSTV 65 (70)
Q Consensus 2 ~~p~~~~~~~~~~~-i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~--~~~~l~~~i 65 (70)
+.|.++++++++++ +.+..+| +.+++++|+|.++||+++ +|+.+.+ |. +.++|.++|
T Consensus 17 ~~~~l~~~~~~~~~~~~~~~v~---~~~~~~~~~v~~~Pt~~~--~G~~~~~--G~~~~~~~l~~~l 76 (77)
T 1ilo_A 17 LEKNAREAVKELGIDAEFEKIK---EMDQILEAGLTALPGLAV--DGELKIM--GRVASKEEIKKIL 76 (77)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEC---SHHHHHHHTCSSSSCEEE--TTEEEEC--SSCCCHHHHHHHC
T ss_pred HHHHHHHHHHHcCCceEEEEec---CHHHHHHCCCCcCCEEEE--CCEEEEc--CCCCCHHHHHHHh
Confidence 57889999999874 8899998 678999999999999998 8988777 75 678888775
No 115
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.23 E-value=1e-10 Score=60.49 Aligned_cols=65 Identities=17% Similarity=0.289 Sum_probs=57.1
Q ss_pred chHHHHHHHhhCC--CcEEEEEeCcC-------------------------cHHHHHHcCCCccCEEEEE-eCCeEEeee
Q psy11066 2 SLVMLQELASEFP--DVVFLKVDVDE-------------------------SEDIAMAYDISSMPTFVFV-KSTAKVEQF 53 (70)
Q Consensus 2 ~~p~~~~~~~~~~--~i~~~~vd~~~-------------------------~~~~~~~~~i~~~Pt~~~~-~~g~~~~~~ 53 (70)
+.|.+.++.++++ ++.++.++++. ...+++.|++.++||++++ ++|+.+.++
T Consensus 52 ~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 131 (145)
T 3erw_A 52 ELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEYHIITIPTSFLLNEKGEIEKTK 131 (145)
T ss_dssp HHHHHHHHHHHCCCSSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHHTTCCEESEEEEECTTCCEEEEE
T ss_pred HHHHHHHHHHHcCCCCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHhcCcCccCeEEEEcCCCcEEEEE
Confidence 4688999999997 49999998854 5689999999999999999 899999999
Q ss_pred eCC-CHHHHHHHHH
Q psy11066 54 SGA-NFDKLRSTVL 66 (70)
Q Consensus 54 ~g~-~~~~l~~~i~ 66 (70)
.|. +.+.|.++|+
T Consensus 132 ~g~~~~~~l~~~l~ 145 (145)
T 3erw_A 132 IGPMTAEQLKEWTE 145 (145)
T ss_dssp ESCCCHHHHHHHHC
T ss_pred cCCcCHHHHHHhhC
Confidence 999 9999998873
No 116
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.23 E-value=2.8e-11 Score=73.53 Aligned_cols=67 Identities=19% Similarity=0.408 Sum_probs=60.1
Q ss_pred chHHHHHHHhhCCC---cEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeE--EeeeeCC-CHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPD---VVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAK--VEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~---i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~--~~~~~g~-~~~~l~~~i~~~~ 69 (70)
+.|.++++++.+++ +.++.+|++.+ +++++|+|.++||+++|++|.. ..++.|. +.+.|.++|++++
T Consensus 388 ~~p~~~~l~~~~~~~~~v~~~~id~~~~-~~~~~~~v~~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~~ 460 (481)
T 3f8u_A 388 LEPKYKELGEKLSKDPNIVIAKMDATAN-DVPSPYEVRGFPTIYFSPANKKLNPKKYEGGRELSDFISYLQREA 460 (481)
T ss_dssp HHHHHHHHHHHTTTCSSEEEEEEETTSS-CCCTTCCCCSSSEEEEECTTCTTSCEECCSCCSHHHHHHHHHHHC
T ss_pred hhHHHHHHHHHhccCCCEEEEEEECCch-hhHhhCCCcccCEEEEEeCCCeEeeeEeCCCCCHHHHHHHHHHhc
Confidence 67999999998853 99999999988 8899999999999999988876 7889999 9999999998875
No 117
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.22 E-value=1.3e-10 Score=60.89 Aligned_cols=68 Identities=18% Similarity=0.286 Sum_probs=59.4
Q ss_pred chHHHHHHHhhCCC--cEEEEEeCcCcH-----------------------HHHHHcCCCccCEEEEEe-CCeEEeeeeC
Q psy11066 2 SLVMLQELASEFPD--VVFLKVDVDESE-----------------------DIAMAYDISSMPTFVFVK-STAKVEQFSG 55 (70)
Q Consensus 2 ~~p~~~~~~~~~~~--i~~~~vd~~~~~-----------------------~~~~~~~i~~~Pt~~~~~-~g~~~~~~~g 55 (70)
+.|.+.++.+++++ +.++.|+++... .+++.|++.++||++++. +|+.+.+..|
T Consensus 48 ~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g 127 (152)
T 2lja_A 48 ELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLINGIPRFILLDRDGKIISANMT 127 (152)
T ss_dssp THHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTCCSSCCEEEECTTSCEEESSCC
T ss_pred HhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCcCCCCEEEEECCCCeEEEccCC
Confidence 46788999998864 899999988764 788999999999999995 9999999999
Q ss_pred C-CHHHHHHHHHhhc
Q psy11066 56 A-NFDKLRSTVLANR 69 (70)
Q Consensus 56 ~-~~~~l~~~i~~~~ 69 (70)
. +.++|.++|++++
T Consensus 128 ~~~~~~l~~~l~~~~ 142 (152)
T 2lja_A 128 RPSDPKTAEKFNELL 142 (152)
T ss_dssp CTTCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHh
Confidence 8 8999999998765
No 118
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.22 E-value=4e-11 Score=74.27 Aligned_cols=68 Identities=16% Similarity=0.274 Sum_probs=57.8
Q ss_pred chHHHHHHHhhCC----CcEEEEEeCc--CcHHHHHHcCCCccCEEEEEe----CCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFP----DVVFLKVDVD--ESEDIAMAYDISSMPTFVFVK----STAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~----~i~~~~vd~~--~~~~~~~~~~i~~~Pt~~~~~----~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
+.|.|++++++++ ++.|+.||++ ++++++++|+|.++||+++|+ +|+.+....|. +.+.|.++|.+.+
T Consensus 48 ~~P~l~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V~~~PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l 126 (519)
T 3t58_A 48 FAPTWKELANDVKDWRPALNLAVLDCAEETNSAVCREFNIAGFPTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDAL 126 (519)
T ss_dssp HHHHHHHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTCCSBSEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCCcccCEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHH
Confidence 6799999999875 3999999995 589999999999999999998 45556667777 9999999998764
No 119
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.21 E-value=5.8e-11 Score=67.31 Aligned_cols=64 Identities=16% Similarity=0.279 Sum_probs=55.3
Q ss_pred chHHHHHHHhhCCC------cEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhh
Q psy11066 2 SLVMLQELASEFPD------VVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLAN 68 (70)
Q Consensus 2 ~~p~~~~~~~~~~~------i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~ 68 (70)
+.|.++++++.++. +.|..+|++++++++++|+|.++||+++| +| ..++.|. +...+.+++...
T Consensus 45 ~~~~l~ela~~~~~~~~~~~v~~~~vd~d~~~~~~~~~gv~~~Pt~~i~-~g--~~~~~G~~~~~~l~~fv~~~ 115 (243)
T 2hls_A 45 TLRLMKLFEEESPTRNGGKLLKLNVYYRESDSDKFSEFKVERVPTVAFL-GG--EVRWTGIPAGEEIRALVEVI 115 (243)
T ss_dssp HHHHHHHHHHHSCEETTEESEEEEEEETTTTHHHHHHTTCCSSSEEEET-TT--TEEEESCCCTTHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCCCCceeEEEEecCCcCHHHHHhcCCCcCCEEEEE-CC--ceeEcCCCcHHHHHHHHHHH
Confidence 57889999988655 99999999999999999999999999999 67 7788898 777787777654
No 120
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.20 E-value=1.4e-10 Score=60.92 Aligned_cols=67 Identities=21% Similarity=0.312 Sum_probs=59.1
Q ss_pred chHHHHHHHhhCCCcEEEEEeC---------------------------cCcHHHHHHcCCCccCEEEEE-eCCeEEeee
Q psy11066 2 SLVMLQELASEFPDVVFLKVDV---------------------------DESEDIAMAYDISSMPTFVFV-KSTAKVEQF 53 (70)
Q Consensus 2 ~~p~~~~~~~~~~~i~~~~vd~---------------------------~~~~~~~~~~~i~~~Pt~~~~-~~g~~~~~~ 53 (70)
+.|.+.++.+++ ++.++.|++ +....+++.|++.++|+++++ ++|+.+.++
T Consensus 48 ~~~~l~~l~~~~-~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 126 (154)
T 3ia1_A 48 EFPGLHRVAEET-GVPFYVISREPRDTREVVLEYMKTYPRFIPLLASDRDRPHEVAARFKVLGQPWTFVVDREGKVVALF 126 (154)
T ss_dssp HHHHHHHHHHHH-CCCEEEEECCTTCCHHHHHHHHTTCTTEEECBCCSSCCHHHHHTTSSBCSSCEEEEECTTSEEEEEE
T ss_pred HHHHHHHHHHHc-CCeEEEEeCCCcccHHHHHHHHHHcCCCcccccccccchHHHHHHhCCCcccEEEEECCCCCEEEEE
Confidence 457888888888 888888888 366788999999999998888 799999999
Q ss_pred eCC-CHHHHHHHHHhhc
Q psy11066 54 SGA-NFDKLRSTVLANR 69 (70)
Q Consensus 54 ~g~-~~~~l~~~i~~~~ 69 (70)
.|. +.++|.++|+++.
T Consensus 127 ~g~~~~~~l~~~l~~~~ 143 (154)
T 3ia1_A 127 AGRAGREALLDALLLAG 143 (154)
T ss_dssp ESBCCHHHHHHHHHHTT
T ss_pred cCCCCHHHHHHHHHhcc
Confidence 999 9999999998875
No 121
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.20 E-value=1.7e-10 Score=60.45 Aligned_cols=68 Identities=19% Similarity=0.315 Sum_probs=58.3
Q ss_pred chHHHHHHHhhCC--CcEEEEEeCcC----------------------cHHHHHHcCCCccCEEEEE-eCCeEEeeeeCC
Q psy11066 2 SLVMLQELASEFP--DVVFLKVDVDE----------------------SEDIAMAYDISSMPTFVFV-KSTAKVEQFSGA 56 (70)
Q Consensus 2 ~~p~~~~~~~~~~--~i~~~~vd~~~----------------------~~~~~~~~~i~~~Pt~~~~-~~g~~~~~~~g~ 56 (70)
+.|.+.++.++++ ++.++.|+++. ...+++.|++.++||++++ ++|+.+.++.|.
T Consensus 44 ~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~G~ 123 (151)
T 2f9s_A 44 EFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSPLPTTFLINPEGKVVKVVTGT 123 (151)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTCCSSCEEEEECTTSEEEEEEESC
T ss_pred HHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCCCCCCeEEEECCCCcEEEEEeCC
Confidence 4578888888875 38899888865 3478999999999999999 799999999999
Q ss_pred -CHHHHHHHHHhhc
Q psy11066 57 -NFDKLRSTVLANR 69 (70)
Q Consensus 57 -~~~~l~~~i~~~~ 69 (70)
+.+.|.++|++++
T Consensus 124 ~~~~~l~~~l~~ll 137 (151)
T 2f9s_A 124 MTESMIHDYMNLIK 137 (151)
T ss_dssp CCHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHH
Confidence 9999999998875
No 122
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.19 E-value=2.9e-11 Score=65.49 Aligned_cols=56 Identities=13% Similarity=0.115 Sum_probs=48.8
Q ss_pred chHHHHHHHhhCCCcEEEEEeCcCcHHHHHHcC---CCccCEEEEEeC-CeEEeeeeCCC
Q psy11066 2 SLVMLQELASEFPDVVFLKVDVDESEDIAMAYD---ISSMPTFVFVKS-TAKVEQFSGAN 57 (70)
Q Consensus 2 ~~p~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~---i~~~Pt~~~~~~-g~~~~~~~g~~ 57 (70)
+.|.+++++++++++.+..+|.+++++++.+|. +.++||++++++ |+++.++.|.+
T Consensus 72 ~~P~l~~l~~~~~~v~~~~v~~d~~~~~~~~~~~~~v~~iPt~i~~~~~G~~~~~~g~~p 131 (167)
T 1z6n_A 72 NLAALDFAQRLQPNIELAIISKGRAEDDLRQRLALERIAIPLVLVLDEEFNLLGRFVERP 131 (167)
T ss_dssp HHHHHHHHHHHCTTEEEEEECHHHHHHHTTTTTTCSSCCSSEEEEECTTCCEEEEEESSC
T ss_pred HHHHHHHHHHHCCCcEEEEEECCCCHHHHHHHHHcCCCCcCeEEEECCCCCEEEEEcCCC
Confidence 579999999999889999999999999999997 999999999976 58887774433
No 123
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.18 E-value=1e-10 Score=62.10 Aligned_cols=67 Identities=15% Similarity=0.274 Sum_probs=53.9
Q ss_pred chHHH---HHHHhhC-CCcEEEEEeCcCc-----------HHHHHHcCCCccCEEEEE-eCCeEEeeeeCC---CHHHHH
Q psy11066 2 SLVML---QELASEF-PDVVFLKVDVDES-----------EDIAMAYDISSMPTFVFV-KSTAKVEQFSGA---NFDKLR 62 (70)
Q Consensus 2 ~~p~~---~~~~~~~-~~i~~~~vd~~~~-----------~~~~~~~~i~~~Pt~~~~-~~g~~~~~~~g~---~~~~l~ 62 (70)
+.|.+ .++.+.+ .++.++.+|+++. ..+++.|+|.++||++++ ++|+.+.++ |. +.+.+.
T Consensus 66 ~~p~l~~~~~~~~~~~~~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~v~~~Pt~~~~d~~G~~~~~~-G~~~~~~~~l~ 144 (154)
T 2ju5_A 66 MQDQILQSSEFKHFAGVHLHMVEVDFPQKNHQPEEQRQKNQELKAQYKVTGFPELVFIDAEGKQLARM-GFEPGGGAAYV 144 (154)
T ss_dssp HHHHTTTSHHHHHHHHHHCEEEEEECCSSCCCCHHHHHHHHHHHHHTTCCSSSEEEEECTTCCEEEEE-CCCTTCHHHHH
T ss_pred HHHHHhcCHHHHHHhcCcEEEEEecCccccCCChhhHhhHHHHHHHcCCCCCCEEEEEcCCCCEEEEe-cCCCCCHHHHH
Confidence 35666 5665554 3499999999765 488999999999999999 799999999 87 377899
Q ss_pred HHHHhhc
Q psy11066 63 STVLANR 69 (70)
Q Consensus 63 ~~i~~~~ 69 (70)
++|++.+
T Consensus 145 ~~l~~~l 151 (154)
T 2ju5_A 145 SKVKSAL 151 (154)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9988765
No 124
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.17 E-value=7.7e-11 Score=69.39 Aligned_cols=66 Identities=21% Similarity=0.405 Sum_probs=57.8
Q ss_pred chHHHHHHHhhCCC---cEEEEEeCcCcHHHHHHcCCCccCEEEEEeCC--eEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPD---VVFLKVDVDESEDIAMAYDISSMPTFVFVKST--AKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~---i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g--~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
+.|.|+++++.+++ +.++.+|++.+. +.+|+|.++||+++|++| +...++.|. +.+.|.+||++..
T Consensus 285 ~~p~~~~la~~~~~~~~v~~~~vd~~~~~--~~~~~v~~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~~ 356 (361)
T 3uem_A 285 LAPIWDKLGETYKDHENIVIAKMDSTANE--VEAVKVHSFPTLKFFPASADRTVIDYNGERTLDGFKKFLESGG 356 (361)
T ss_dssp HHHHHHHHHHHTTTCSSEEEEEEETTTCB--CSSCCCCSSSEEEEECSSSSCCCEECCSCSSHHHHHHHHTTTS
T ss_pred HHHHHHHHHHHhccCCcEEEEEEECCccc--hhhcCCcccCeEEEEECCCCcceeEecCCCCHHHHHHHHHhcC
Confidence 67999999998854 899999999877 789999999999999654 678899999 9999999998764
No 125
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.17 E-value=4.2e-10 Score=59.50 Aligned_cols=68 Identities=15% Similarity=0.224 Sum_probs=58.6
Q ss_pred chHHHHHHHhhCCC--cEEEEEeCcCcHHHHHHc---------------------------CCCccCEEEEE-eCCeEEe
Q psy11066 2 SLVMLQELASEFPD--VVFLKVDVDESEDIAMAY---------------------------DISSMPTFVFV-KSTAKVE 51 (70)
Q Consensus 2 ~~p~~~~~~~~~~~--i~~~~vd~~~~~~~~~~~---------------------------~i~~~Pt~~~~-~~g~~~~ 51 (70)
+.|.+.++.+++++ +.++.|+++...+...+| ++.++||++++ ++|+.+.
T Consensus 52 ~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~ 131 (165)
T 3or5_A 52 EIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKNYMKTQGIIYPVMMATPELIRAFNGYIDGGITGIPTSFVIDASGNVSG 131 (165)
T ss_dssp HHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHHHHHHHTCCSCEEECCHHHHHHHHTTSTTCSCSSSEEEEECTTSBEEE
T ss_pred HHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHHHHcCCCCceEecCHHHHHHHhhhhccCCCCCCeEEEECCCCcEEE
Confidence 46788889888864 999999999877666666 89999999999 7999999
Q ss_pred eeeCC-CHHHHHHHHHhhc
Q psy11066 52 QFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 52 ~~~g~-~~~~l~~~i~~~~ 69 (70)
++.|. +.+.+.++|++.+
T Consensus 132 ~~~g~~~~~~l~~~l~~~l 150 (165)
T 3or5_A 132 VIVGPRSKADFDRIVKMAL 150 (165)
T ss_dssp EECSCCCHHHHHHHHHHHH
T ss_pred EEcCCCCHHHHHHHHHHHH
Confidence 99999 9999999998765
No 126
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.17 E-value=4.1e-10 Score=59.34 Aligned_cols=68 Identities=10% Similarity=0.106 Sum_probs=57.7
Q ss_pred chHHHHHHHhhCCC--cEEEEEeC----------------------------cCcHH------HHHHcCCCccCEEEEE-
Q psy11066 2 SLVMLQELASEFPD--VVFLKVDV----------------------------DESED------IAMAYDISSMPTFVFV- 44 (70)
Q Consensus 2 ~~p~~~~~~~~~~~--i~~~~vd~----------------------------~~~~~------~~~~~~i~~~Pt~~~~- 44 (70)
+.|.+.++.+++++ +.++.|++ +.... +++.|++.++||++++
T Consensus 49 ~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~v~~~P~~~lid 128 (160)
T 3lor_A 49 GVPQAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDEFGIKFPVAVDMPREGQRIPSTMKKYRLEGTPSIILAD 128 (160)
T ss_dssp HHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCTTCSSCHHHHHTTCCSSSEEEEEC
T ss_pred hhHHHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHHHcCCCCcEEECCccccchhhhHHHhcccCccceEEEEC
Confidence 46889999999864 88988875 22333 8999999999999999
Q ss_pred eCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 45 KSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 45 ~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
++|+.+.++.|. +.+.+.+.|++++
T Consensus 129 ~~G~i~~~~~g~~~~~~l~~~i~~ll 154 (160)
T 3lor_A 129 RKGRIRQVQFGQVDDFVLGLLLGSLL 154 (160)
T ss_dssp TTSBEEEEEESCCCHHHHHHHHHHHH
T ss_pred CCCcEEEEecCcCCHHHHHHHHHHHH
Confidence 699999999999 9999999998875
No 127
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.14 E-value=7.8e-10 Score=58.21 Aligned_cols=67 Identities=16% Similarity=0.278 Sum_probs=57.0
Q ss_pred hHHHHHHHhhCC--CcEEEEEeCc----------------------------CcH-----HHHHHcCCCccCEEEEE-eC
Q psy11066 3 LVMLQELASEFP--DVVFLKVDVD----------------------------ESE-----DIAMAYDISSMPTFVFV-KS 46 (70)
Q Consensus 3 ~p~~~~~~~~~~--~i~~~~vd~~----------------------------~~~-----~~~~~~~i~~~Pt~~~~-~~ 46 (70)
.|.+.++.++++ ++.++.|+++ ... .+++.|++.++||++++ ++
T Consensus 48 ~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~v~~~P~~~lid~~ 127 (158)
T 3eyt_A 48 IPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAFLHEYRIKFPVGVDQPGDGAMPRTMAAYQMRGTPSLLLIDKA 127 (158)
T ss_dssp HHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTCCSCEEEECCCSSSSCHHHHHTTCCSSSEEEEECTT
T ss_pred hHHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHHHHHcCCCceEEEcCccchhhHHHHHHcCCCCCCEEEEECCC
Confidence 688999999997 3888888853 122 58999999999999999 79
Q ss_pred CeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 47 TAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 47 g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
|+.+.++.|. +.+.|.+.|++.+
T Consensus 128 G~i~~~~~g~~~~~~l~~~i~~ll 151 (158)
T 3eyt_A 128 GDLRAHHFGDVSELLLGAEIATLL 151 (158)
T ss_dssp SEEEEEEESCCCHHHHHHHHHHHH
T ss_pred CCEEEEEeCCCCHHHHHHHHHHHh
Confidence 9999999999 9999999998775
No 128
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.14 E-value=7.9e-10 Score=58.01 Aligned_cols=68 Identities=15% Similarity=0.225 Sum_probs=57.5
Q ss_pred chHHHHHHHhhCC--CcEEEEEeCcC------------------------cHHHHHHcC--CCccCEEEEE-eCCeEEee
Q psy11066 2 SLVMLQELASEFP--DVVFLKVDVDE------------------------SEDIAMAYD--ISSMPTFVFV-KSTAKVEQ 52 (70)
Q Consensus 2 ~~p~~~~~~~~~~--~i~~~~vd~~~------------------------~~~~~~~~~--i~~~Pt~~~~-~~g~~~~~ 52 (70)
+.|.+.++.+++. ++.++.|+++. ...+++.|+ +.++||++++ ++|+.+.+
T Consensus 42 ~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 121 (151)
T 3raz_A 42 EMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYGNTVGVLPFTVVEAPKCGYRQT 121 (151)
T ss_dssp HHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTTCCSCCSSEEEEEETTTTEEEE
T ss_pred HHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhCCccCCCCEEEEECCCCcEEEE
Confidence 4688999998884 39999998863 345778899 9999999998 78999999
Q ss_pred eeCC-CHHHHHHHHHhhc
Q psy11066 53 FSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 53 ~~g~-~~~~l~~~i~~~~ 69 (70)
+.|. +.+.|.++|+++.
T Consensus 122 ~~g~~~~~~l~~~l~~l~ 139 (151)
T 3raz_A 122 ITGEVNEKSLTDAVKLAH 139 (151)
T ss_dssp CCSCCCHHHHHHHHHHHH
T ss_pred ECCCCCHHHHHHHHHHHH
Confidence 9999 9999999998764
No 129
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.13 E-value=4.8e-10 Score=66.01 Aligned_cols=68 Identities=12% Similarity=0.298 Sum_probs=57.8
Q ss_pred chHHHHHHHhhCCC-cEEEEEeCc--CcHHHHHHcCCCc--cCEEEEEeCCeEEeeee---CC-CHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPD-VVFLKVDVD--ESEDIAMAYDISS--MPTFVFVKSTAKVEQFS---GA-NFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~-i~~~~vd~~--~~~~~~~~~~i~~--~Pt~~~~~~g~~~~~~~---g~-~~~~l~~~i~~~~ 69 (70)
+.|.|+++++++.+ +.|+.+|++ +.+.+++.|++.+ +||++++..|....++. |. +.+.|.+|+..++
T Consensus 153 ~~~~~~~~A~~~~~~i~f~~vd~~~~~~~~~~~~fgi~~~~~P~~~~~~~~~~~~ky~~~~~~~~~~~l~~fi~~~l 229 (361)
T 3uem_A 153 KLSNFKTAAESFKGKILFIFIDSDHTDNQRILEFFGLKKEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFL 229 (361)
T ss_dssp HHHHHHHHHGGGTTTCEEEEECTTSGGGHHHHHHTTCCTTTCSEEEEEECC--CCEECCSSCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCceEEEEecCChHHHHHHHHHcCCCccCCccEEEEEcCCcccccCCCccccCHHHHHHHHHHHh
Confidence 56889999999976 999999999 6899999999998 99999998876666665 66 9999999998764
No 130
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.13 E-value=9.7e-10 Score=56.04 Aligned_cols=67 Identities=31% Similarity=0.340 Sum_probs=56.5
Q ss_pred chHHHHHHHhhCCC-cEEEEEeC----------------------------cCcHHHHHHcCCCccCEEEEE-eCCeEEe
Q psy11066 2 SLVMLQELASEFPD-VVFLKVDV----------------------------DESEDIAMAYDISSMPTFVFV-KSTAKVE 51 (70)
Q Consensus 2 ~~p~~~~~~~~~~~-i~~~~vd~----------------------------~~~~~~~~~~~i~~~Pt~~~~-~~g~~~~ 51 (70)
+.|.+.++.+++++ +.++.++. +....+++.|++.++||++++ ++|+.+.
T Consensus 40 ~~~~l~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~ 119 (138)
T 4evm_A 40 SLPDTDEIAKEAGDDYVVLTVVSPGHKGEQSEADFKNWYKGLDYKNLPVLVDPSGKLLETYGVRSYPTQAFIDKEGKLVK 119 (138)
T ss_dssp HHHHHHHHHHTCTTTEEEEEEECTTSTTCCCHHHHHHHHTTCCCTTCCEEECTTCHHHHHTTCCSSSEEEEECTTCCEEE
T ss_pred HHHHHHHHHHHhCCCcEEEEEEcCCCCchhhHHHHHHHHhhcCCCCeeEEECcchHHHHHcCcccCCeEEEECCCCcEEE
Confidence 45788888888865 88888843 335578999999999999999 7999999
Q ss_pred eeeCC-CHHHHHHHHHhh
Q psy11066 52 QFSGA-NFDKLRSTVLAN 68 (70)
Q Consensus 52 ~~~g~-~~~~l~~~i~~~ 68 (70)
++.|. +.+++.++|++.
T Consensus 120 ~~~g~~~~~~l~~~l~~l 137 (138)
T 4evm_A 120 THPGFMEKDAILQTLKEL 137 (138)
T ss_dssp EEESCCCHHHHHHHHHHC
T ss_pred eecCCCcHHHHHHHHHhh
Confidence 99999 999999999875
No 131
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.13 E-value=3.3e-10 Score=57.18 Aligned_cols=55 Identities=15% Similarity=0.288 Sum_probs=45.1
Q ss_pred chHHHHHHHhhCCCcEEEEEeCc------CcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHH
Q psy11066 2 SLVMLQELASEFPDVVFLKVDVD------ESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVL 66 (70)
Q Consensus 2 ~~p~~~~~~~~~~~i~~~~vd~~------~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~ 66 (70)
+.|.|++++++++ .+|++ ++++++++|+|+++||+++ +|+. +.|. +.+.|.+++.
T Consensus 30 ~~p~~~~~a~~~~-----~v~~~~~~~~~~~~~l~~~~~V~~~PT~~i--~G~~---~~G~~~~~~l~~~~~ 91 (106)
T 3kp8_A 30 QKELFGAAFDQVP-----YVECSPNGPGTPQAQECTEAGITSYPTWII--NGRT---YTGVRSLEALAVASG 91 (106)
T ss_dssp HHHHHGGGGGGSC-----EEESCTTCTTSCCCHHHHHTTCCSSSEEEE--TTEE---EESCCCHHHHHHHHT
T ss_pred HHHHHHHHHHhCC-----EEEEecccccchhHHHHHHcCCeEeCEEEE--CCEE---ecCCCCHHHHHHHhC
Confidence 6788999987775 44554 6789999999999999777 8863 8899 9999998874
No 132
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.11 E-value=1.1e-11 Score=76.00 Aligned_cols=55 Identities=16% Similarity=0.271 Sum_probs=46.6
Q ss_pred chHHHHHHHhhCC---------CcEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCe--EEeeeeCC
Q psy11066 2 SLVMLQELASEFP---------DVVFLKVDVDESEDIAMAYDISSMPTFVFVKSTA--KVEQFSGA 56 (70)
Q Consensus 2 ~~p~~~~~~~~~~---------~i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~--~~~~~~g~ 56 (70)
+.|.|+++++++. .+.|+.||++++++++++|+|.++||+++|++|. ...++.|.
T Consensus 60 ~~P~l~~la~~~~~~~g~~~~~~v~f~~VD~d~~~~la~~y~V~~~PTlilf~~gg~~~~~~y~G~ 125 (470)
T 3qcp_A 60 YASTFSKFAGGLKVEHGKDALQIATAAAVNCASEVDLCRKYDINFVPRLFFFYPRDSCRSNEECGT 125 (470)
T ss_dssp HHHHHHHHHHTSCCSSCSSGGGGCEEEEEETTTCHHHHHHTTCCSSCEEEEEEESSCCCTTSCCCC
T ss_pred HHHHHHHHHHHHhhhcccccCceEEEEEEECCCCHHHHHHcCCCccCeEEEEECCCceEEEEeeCC
Confidence 6799999999986 3999999999999999999999999999996443 35556664
No 133
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.11 E-value=4.2e-10 Score=69.38 Aligned_cols=63 Identities=13% Similarity=0.185 Sum_probs=56.6
Q ss_pred chHHHHHHHhhCCCcEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhh
Q psy11066 2 SLVMLQELASEFPDVVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLAN 68 (70)
Q Consensus 2 ~~p~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~ 68 (70)
+.|.+++++..++++.+.++|.+++++++++|+|.++||+++ ||+.+.+ |. +.++|.+++.+.
T Consensus 135 ~~~~l~~~a~~~~~v~~~~vd~~~~~~~~~~~~i~svPt~~i--~g~~~~~--G~~~~~~l~~~l~~~ 198 (521)
T 1hyu_A 135 VVQALNLMAVLNPRIKHTAIDGGTFQNEITERNVMGVPAVFV--NGKEFGQ--GRMTLTEIVAKVDTG 198 (521)
T ss_dssp HHHHHHHHHHHCTTEEEEEEETTTCHHHHHHTTCCSSSEEEE--TTEEEEE--SCCCHHHHHHHHCCS
T ss_pred HHHHHHHHHhHcCceEEEEEechhhHHHHHHhCCCccCEEEE--CCEEEec--CCCCHHHHHHHHhhc
Confidence 578999999999889999999999999999999999999977 8988765 88 999999998653
No 134
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.09 E-value=8.7e-11 Score=71.84 Aligned_cols=66 Identities=27% Similarity=0.330 Sum_probs=57.5
Q ss_pred chHHHHHHHhhCC----CcEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeE--EeeeeCC-CHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFP----DVVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAK--VEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~----~i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~--~~~~~g~-~~~~l~~~i~~~~ 69 (70)
+.|.|+++++.++ ++.++++|++.+... . |+|.++||+++|++|+. ..++.|. +.+.|.++|++++
T Consensus 394 ~~p~~~~l~~~~~~~~~~v~~~~vd~~~~~~~-~-~~v~~~Pt~~~~~~G~~~~~~~~~G~~~~~~l~~~i~~~~ 466 (504)
T 2b5e_A 394 LAPTYQELADTYANATSDVLIAKLDHTENDVR-G-VVIEGYPTIVLYPGGKKSESVVYQGSRSLDSLFDFIKENG 466 (504)
T ss_dssp HHHHHHHHHHHHHHHCSSCEEEEEEGGGCCCS-S-CCCSSSSEEEEECCTTSCCCCBCCSCCCHHHHHHHHHHHC
T ss_pred HhHHHHHHHHHhhccCCcEEEEEecCCccccc-c-CCceecCeEEEEeCCceecceEecCCCCHHHHHHHHHhcC
Confidence 6799999998875 599999999987644 4 99999999999999976 7889998 9999999998865
No 135
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.09 E-value=1.6e-10 Score=62.00 Aligned_cols=63 Identities=13% Similarity=0.257 Sum_probs=51.7
Q ss_pred HHHHhhCC-CcEEEEEeCcCcHHH--------------------------HHHcCCCccCEEEEE-eCCeEEeeeeCC-C
Q psy11066 7 QELASEFP-DVVFLKVDVDESEDI--------------------------AMAYDISSMPTFVFV-KSTAKVEQFSGA-N 57 (70)
Q Consensus 7 ~~~~~~~~-~i~~~~vd~~~~~~~--------------------------~~~~~i~~~Pt~~~~-~~g~~~~~~~g~-~ 57 (70)
.++.+.+. ++.++.+|+++..++ ++.|++.++||++++ ++|+.+.++.|. +
T Consensus 73 ~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~Pt~~lid~~G~~~~~~~G~~~ 152 (172)
T 3f9u_A 73 PKVSSIINNDYVLITLYVDNKTPLTEPVKIMENGTERTLRTVGDKWSYLQRVKFGANAQPFYVLIDNEGNPLNKSYAYDE 152 (172)
T ss_dssp HHHHHHHHHHCEEEEEETTCCCEEEEEEEEEETTEEEEEEEHHHHHHHHHHHHHSCCCSSEEEEECTTSCBSSCCBCSCC
T ss_pred HHHHHHhcCCEEEEEEecCcccccchhhhhhhcchhhhhhhhhhhhhHHHHHHcCCCCcceEEEECCCCCEEeeccCCCC
Confidence 34444443 489999999877655 789999999999999 899999999999 7
Q ss_pred -HHHHHHHHHhhc
Q psy11066 58 -FDKLRSTVLANR 69 (70)
Q Consensus 58 -~~~l~~~i~~~~ 69 (70)
.+.+.++|++.+
T Consensus 153 ~~~~l~~~l~~~l 165 (172)
T 3f9u_A 153 DISKYINFLQTGL 165 (172)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 999999988754
No 136
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.08 E-value=1.5e-09 Score=56.73 Aligned_cols=68 Identities=18% Similarity=0.339 Sum_probs=56.7
Q ss_pred chHHHHHHHhhCCC--cEEEEEeCcCcH----------------------HHHHHcCCCccCEEEEE-eCCeEEeeeeCC
Q psy11066 2 SLVMLQELASEFPD--VVFLKVDVDESE----------------------DIAMAYDISSMPTFVFV-KSTAKVEQFSGA 56 (70)
Q Consensus 2 ~~p~~~~~~~~~~~--i~~~~vd~~~~~----------------------~~~~~~~i~~~Pt~~~~-~~g~~~~~~~g~ 56 (70)
+.|.+.++.+++++ +.++.++++... .+++.|++.++||++++ ++|+.+.++.|.
T Consensus 46 ~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~ 125 (152)
T 3gl3_A 46 SFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYGVKGMPTSFLIDRNGKVLLQHVGF 125 (152)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTTCCSSSEEEEECTTSBEEEEEESC
T ss_pred HHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcCCCCCCeEEEECCCCCEEEEEccC
Confidence 45778888888864 889999888654 67889999999999888 799999999996
Q ss_pred -C--HHHHHHHHHhhc
Q psy11066 57 -N--FDKLRSTVLANR 69 (70)
Q Consensus 57 -~--~~~l~~~i~~~~ 69 (70)
+ .+.|.++|++++
T Consensus 126 ~~~~~~~l~~~i~~~~ 141 (152)
T 3gl3_A 126 RPADKEALEQQILAAL 141 (152)
T ss_dssp CTTTHHHHHHHHHHHT
T ss_pred CCcCHHHHHHHHHHHH
Confidence 3 478999998765
No 137
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.07 E-value=6.7e-10 Score=57.64 Aligned_cols=67 Identities=13% Similarity=0.242 Sum_probs=56.5
Q ss_pred chHHHHHHHhhCCC--cEEEEEeCcCcHH-------------------------HHHHcCCCccCEEEEE-eCCeEEeee
Q psy11066 2 SLVMLQELASEFPD--VVFLKVDVDESED-------------------------IAMAYDISSMPTFVFV-KSTAKVEQF 53 (70)
Q Consensus 2 ~~p~~~~~~~~~~~--i~~~~vd~~~~~~-------------------------~~~~~~i~~~Pt~~~~-~~g~~~~~~ 53 (70)
+.|.+.++.+++++ +.++.|+++...+ +++.|++.++||++++ ++|+.+.+.
T Consensus 49 ~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~ 128 (148)
T 3hcz_A 49 ETPKLYDWWLKNRAKGIQVYAANIERKDEEWLKFIRSKKIGGWLNVRDSKNHTDFKITYDIYATPVLYVLDKNKVIIAKR 128 (148)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEECCSSSHHHHHHHHHHTCTTSEEEECTTCCCCHHHHHCCCSSCEEEEECTTCBEEEES
T ss_pred HHHHHHHHHHHhccCCEEEEEEEecCCHHHHHHHHHHcCCCCceEEeccccchhHHHhcCcCCCCEEEEECCCCcEEEec
Confidence 56888899888864 9999999987766 8999999999999999 799999999
Q ss_pred eCC-CHHHHHHHHHhh
Q psy11066 54 SGA-NFDKLRSTVLAN 68 (70)
Q Consensus 54 ~g~-~~~~l~~~i~~~ 68 (70)
.|. +.+.+.+.+.+.
T Consensus 129 ~g~~~~~~~l~~l~~~ 144 (148)
T 3hcz_A 129 IGYENLDDFLVQYEKS 144 (148)
T ss_dssp CCGGGHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHH
Confidence 998 777776666554
No 138
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.05 E-value=2.7e-10 Score=60.24 Aligned_cols=68 Identities=18% Similarity=0.238 Sum_probs=54.5
Q ss_pred chHHHHHHHhhCC--CcEEEEEe----------------------------CcCcHHHHHHcCCCccCEEEEE-eCCeEE
Q psy11066 2 SLVMLQELASEFP--DVVFLKVD----------------------------VDESEDIAMAYDISSMPTFVFV-KSTAKV 50 (70)
Q Consensus 2 ~~p~~~~~~~~~~--~i~~~~vd----------------------------~~~~~~~~~~~~i~~~Pt~~~~-~~g~~~ 50 (70)
+.|.+.++.+++. ++.++.|+ .+...++++.|++.++||++++ ++|+.+
T Consensus 56 ~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~ 135 (164)
T 2h30_A 56 ELGQAEKWAQDAKFSSANLITVASPGFLHEKKDGEFQKWYAGLNYPKLPVVTDNGGTIAQNLNISVYPSWALIGKDGDVQ 135 (164)
T ss_dssp HHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTTHHHHHHTTSCCTTSCEEECTTCHHHHHTTCCSSSEEEEECTTSCEE
T ss_pred HHHHHHHHHHHcccCCcEEEEEEcCCCccccCHHHHHHHHHhCCCCcceEEEcCchHHHHHcCCCccceEEEECCCCcEE
Confidence 4577888887752 35555444 3445678999999999999999 799999
Q ss_pred eeeeCC-CHHHHHHHHHhhc
Q psy11066 51 EQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 51 ~~~~g~-~~~~l~~~i~~~~ 69 (70)
.++.|. +.+.|.++|++.+
T Consensus 136 ~~~~g~~~~~~l~~~i~~~~ 155 (164)
T 2h30_A 136 RIVKGSINEAQALALIRNPN 155 (164)
T ss_dssp EEEESCCCHHHHHHHHHCTT
T ss_pred EEEcCCCCHHHHHHHHHHHH
Confidence 999998 9999999998765
No 139
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.02 E-value=2.5e-09 Score=55.99 Aligned_cols=67 Identities=18% Similarity=0.337 Sum_probs=53.2
Q ss_pred chHHHHHHHhhCCCcEEEEEeCc-----------------------CcHHHHHHcCCCccCEEEEE-eCCeEEeeeeCC-
Q psy11066 2 SLVMLQELASEFPDVVFLKVDVD-----------------------ESEDIAMAYDISSMPTFVFV-KSTAKVEQFSGA- 56 (70)
Q Consensus 2 ~~p~~~~~~~~~~~i~~~~vd~~-----------------------~~~~~~~~~~i~~~Pt~~~~-~~g~~~~~~~g~- 56 (70)
+.|.+.++.++ +++.++.++++ ....+++.|++.++||++++ ++|+.+.++.|.
T Consensus 60 ~~~~l~~l~~~-~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~~id~~G~i~~~~~g~~ 138 (156)
T 1kng_A 60 EAPLLTELGKD-KRFQLVGINYKDAADNARRFLGRYGNPFGRVGVDANGRASIEWGVYGVPETFVVGREGTIVYKLVGPI 138 (156)
T ss_dssp HHHHHHHHTTC-TTSEEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTSHHHHHTTCCSSCEEEEECTTSBEEEEEESCC
T ss_pred HHHHHHHHHhc-CCeEEEEEECCCCHHHHHHHHHHcCCCCceeeeCchhHHHHhcCcCccCeEEEEcCCCCEEEEEeCCC
Confidence 45777787776 55888887753 34578899999999977777 799999999999
Q ss_pred CHHHHHHHHHhhc
Q psy11066 57 NFDKLRSTVLANR 69 (70)
Q Consensus 57 ~~~~l~~~i~~~~ 69 (70)
+.+.+.++|++++
T Consensus 139 ~~~~l~~~l~~~l 151 (156)
T 1kng_A 139 TPDNLRSVLLPQM 151 (156)
T ss_dssp CHHHHHHTHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 8888888887654
No 140
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.01 E-value=5.6e-09 Score=54.10 Aligned_cols=66 Identities=18% Similarity=0.265 Sum_probs=54.9
Q ss_pred chHHHHHHHhhC-CC--cEEEEEeCcC-------------------------cHHHHHHcCCCccCEEEEE-eCCeEEee
Q psy11066 2 SLVMLQELASEF-PD--VVFLKVDVDE-------------------------SEDIAMAYDISSMPTFVFV-KSTAKVEQ 52 (70)
Q Consensus 2 ~~p~~~~~~~~~-~~--i~~~~vd~~~-------------------------~~~~~~~~~i~~~Pt~~~~-~~g~~~~~ 52 (70)
+.|.+.++.+++ ++ +.++.++++. ...++..|++.++||++++ ++|+.+.+
T Consensus 51 ~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 130 (148)
T 3fkf_A 51 ANAELKRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQYAILTLPTNILLSPTGKILAR 130 (148)
T ss_dssp HHHHHHHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTTCCSSSEEEEECTTSBEEEE
T ss_pred HhHHHHHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhcCCCCcCEEEEECCCCeEEEe
Confidence 468899999988 54 8899998876 3478999999999999999 79988887
Q ss_pred eeCCCHHHHHHHHHhhc
Q psy11066 53 FSGANFDKLRSTVLANR 69 (70)
Q Consensus 53 ~~g~~~~~l~~~i~~~~ 69 (70)
.. +.+.+.+.|++++
T Consensus 131 ~~--~~~~l~~~l~~ll 145 (148)
T 3fkf_A 131 DI--QGEALTGKLKELL 145 (148)
T ss_dssp SC--CHHHHHHHHHHHC
T ss_pred cC--CHHHHHHHHHHHH
Confidence 76 7778888887765
No 141
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.01 E-value=1.9e-09 Score=56.39 Aligned_cols=68 Identities=19% Similarity=0.366 Sum_probs=56.0
Q ss_pred chHHHHHHHhhCCC--cEEEEEe-----------------------CcCcHHHHHHcCCCccCEEEEE-eCCeEEeeeeC
Q psy11066 2 SLVMLQELASEFPD--VVFLKVD-----------------------VDESEDIAMAYDISSMPTFVFV-KSTAKVEQFSG 55 (70)
Q Consensus 2 ~~p~~~~~~~~~~~--i~~~~vd-----------------------~~~~~~~~~~~~i~~~Pt~~~~-~~g~~~~~~~g 55 (70)
+.|.+.++.+++++ +.++.++ .+....+++.|++.++||++++ ++|+.+.++.|
T Consensus 46 ~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g 125 (153)
T 2l5o_A 46 EMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQYVKDYGLPFTVMYDADKAVGQAFGTQVYPTSVLIGKKGEILKTYVG 125 (153)
T ss_dssp HHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHHHHHTTCCSEEEECSSCHHHHHHTCCSSSEEEEECSSSCCCEEEES
T ss_pred HHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHHHHHcCCCceEEcCchHHHHHHcCCCccCeEEEECCCCcEEEEEcC
Confidence 45778888888753 7777665 3456678999999999999999 79999999999
Q ss_pred C-CHHHHHHHHHhhc
Q psy11066 56 A-NFDKLRSTVLANR 69 (70)
Q Consensus 56 ~-~~~~l~~~i~~~~ 69 (70)
. +.+.|.++|++++
T Consensus 126 ~~~~~~l~~~l~~ll 140 (153)
T 2l5o_A 126 EPDFGKLYQEIDTAW 140 (153)
T ss_dssp SCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 8 9999999998765
No 142
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.00 E-value=5e-11 Score=64.04 Aligned_cols=68 Identities=10% Similarity=0.146 Sum_probs=54.1
Q ss_pred chHHHHHHHhhCC-CcEEEEEeCcCcHH-HHHHcCC--CccCEEEEE-eCCeEEeeeeC----------C-CHHHHHHHH
Q psy11066 2 SLVMLQELASEFP-DVVFLKVDVDESED-IAMAYDI--SSMPTFVFV-KSTAKVEQFSG----------A-NFDKLRSTV 65 (70)
Q Consensus 2 ~~p~~~~~~~~~~-~i~~~~vd~~~~~~-~~~~~~i--~~~Pt~~~~-~~g~~~~~~~g----------~-~~~~l~~~i 65 (70)
+.|.|+++++.+. ++.|+.||+++.++ ++..|++ .++||+++| ++|+.+.++.| . +.+.|.++|
T Consensus 64 ~~p~l~~~~~~~~~~~~~~~v~~d~~~~~~~~~~~~~~~~~Pt~~~~d~~G~~~~~~~G~~~~~~~~~~~~~~~~l~~~l 143 (164)
T 1sen_A 64 LKPKFAESTEISELSHNFVMVNLEDEEEPKDEDFSPDGGYIPRILFLDPSGKVHPEIINENGNPSYKYFYVSAEQVVQGM 143 (164)
T ss_dssp HHHHHHTCHHHHHHHTTSEEEEEEGGGSCSCGGGCTTCSCSSEEEEECTTSCBCTTCCCTTSCTTSTTCCCSHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCeEEEEEecCCchHHHHHhcccCCcCCeEEEECCCCCEEEEEeCCCCccchhcccCCHHHHHHHH
Confidence 5677887766554 37788888887766 7888988 669999999 79999999888 4 678888888
Q ss_pred Hhhc
Q psy11066 66 LANR 69 (70)
Q Consensus 66 ~~~~ 69 (70)
++.+
T Consensus 144 ~~~l 147 (164)
T 1sen_A 144 KEAQ 147 (164)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
No 143
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=98.96 E-value=2.4e-09 Score=56.93 Aligned_cols=66 Identities=9% Similarity=0.149 Sum_probs=51.6
Q ss_pred chHHHHHHHhhCCCcEEEEEe-----------------------CcCcHHHHHHcCCCccCEEEEE-eCCeEEeeeeCC-
Q psy11066 2 SLVMLQELASEFPDVVFLKVD-----------------------VDESEDIAMAYDISSMPTFVFV-KSTAKVEQFSGA- 56 (70)
Q Consensus 2 ~~p~~~~~~~~~~~i~~~~vd-----------------------~~~~~~~~~~~~i~~~Pt~~~~-~~g~~~~~~~g~- 56 (70)
+.|.++++.++ ++.++.|+ .+....++..|++.++|+++++ ++|+.+.++.|.
T Consensus 69 ~~~~l~~l~~~--~v~vv~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~ 146 (168)
T 2b1k_A 69 EHQYLNQLSAQ--GIRVVGMNYKDDRQKAISWLKELGNPYALSLFDGDGMLGLDLGVYGAPETFLIDGNGIIRYRHAGDL 146 (168)
T ss_dssp HHHHHHHHHHT--TCCEEEEEESCCHHHHHHHHHHHCCCCSEEEEETTCHHHHHHTCCSSSEEEEECTTSBEEEEEESCC
T ss_pred HHHHHHHHHHC--CCEEEEEECCCChHHHHHHHHHcCCCCceeeECcchHHHHHcCccccCEEEEECCCCeEEEEEeCCC
Confidence 45778888776 66677766 3455678999999999966555 799999999998
Q ss_pred CHHHHHHHHHhhc
Q psy11066 57 NFDKLRSTVLANR 69 (70)
Q Consensus 57 ~~~~l~~~i~~~~ 69 (70)
+.+.+.++|++.+
T Consensus 147 ~~~~l~~~l~~~l 159 (168)
T 2b1k_A 147 NPRVWEEEIKPLW 159 (168)
T ss_dssp CHHHHHHTTHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 9888888877654
No 144
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=98.95 E-value=7.6e-09 Score=54.26 Aligned_cols=65 Identities=23% Similarity=0.242 Sum_probs=51.1
Q ss_pred chHHHHHHHhhCCC--cEEEEEeCcC-------------------------cHHHHHHcCCCccCEEEEE-eCCeEEeee
Q psy11066 2 SLVMLQELASEFPD--VVFLKVDVDE-------------------------SEDIAMAYDISSMPTFVFV-KSTAKVEQF 53 (70)
Q Consensus 2 ~~p~~~~~~~~~~~--i~~~~vd~~~-------------------------~~~~~~~~~i~~~Pt~~~~-~~g~~~~~~ 53 (70)
+.|.+.++.+++++ +.++.|+++. ...+++.|++.++||++++ ++|+.+.++
T Consensus 47 ~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~ 126 (152)
T 2lrn_A 47 ETPYLLKTYNAFKDKGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYCIVGFPHIILVDPEGKIVAKE 126 (152)
T ss_dssp HHHHHHHHHHHHTTTTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTTCCSSCEEEEECTTSEEEEEC
T ss_pred HHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhCCCcCCeEEEECCCCeEEEee
Confidence 45788888888764 8999999887 5788999999999999999 799998886
Q ss_pred eCCCHHHHHHHHHhh
Q psy11066 54 SGANFDKLRSTVLAN 68 (70)
Q Consensus 54 ~g~~~~~l~~~i~~~ 68 (70)
.+ .+++.++|+++
T Consensus 127 ~~--~~~l~~~l~~l 139 (152)
T 2lrn_A 127 LR--GDDLYNTVEKF 139 (152)
T ss_dssp CC--TTHHHHHHHHH
T ss_pred CC--HHHHHHHHHHH
Confidence 43 34555555544
No 145
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=98.91 E-value=1.1e-08 Score=54.03 Aligned_cols=66 Identities=21% Similarity=0.423 Sum_probs=54.6
Q ss_pred chHHHHHHHhhCC--CcEEEEEeCcC-------------------cHHHHHHcCCCccCEEEEE-eCCeEEeeeeCC-C-
Q psy11066 2 SLVMLQELASEFP--DVVFLKVDVDE-------------------SEDIAMAYDISSMPTFVFV-KSTAKVEQFSGA-N- 57 (70)
Q Consensus 2 ~~p~~~~~~~~~~--~i~~~~vd~~~-------------------~~~~~~~~~i~~~Pt~~~~-~~g~~~~~~~g~-~- 57 (70)
+.|.+.++.++++ ++.++.++.+. ..++++.|++.++|+++++ ++|+.+.++.|. +
T Consensus 59 ~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~G~~~~ 138 (158)
T 3hdc_A 59 EMPSMDRLVKSFPKGDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYGANRLPDTFIVDRKGIIRQRVTGGIEW 138 (158)
T ss_dssp HHHHHHHHHHHSSTTSEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHTTCCSSSEEEEECTTSBEEEEEESCCCT
T ss_pred HHHHHHHHHHHcccCCeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHhCCCCcceEEEEcCCCCEEEEEeCCCcc
Confidence 4578899999997 49999999887 6789999999999998888 799999999998 3
Q ss_pred -HHHHHHHHHh
Q psy11066 58 -FDKLRSTVLA 67 (70)
Q Consensus 58 -~~~l~~~i~~ 67 (70)
.+++.+.+.+
T Consensus 139 ~~~~~~~~~~~ 149 (158)
T 3hdc_A 139 DAPKVVSYLKS 149 (158)
T ss_dssp TSHHHHHHHHT
T ss_pred chHHHHHHHHh
Confidence 4566666654
No 146
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=98.90 E-value=1.5e-08 Score=52.92 Aligned_cols=68 Identities=13% Similarity=0.280 Sum_probs=54.8
Q ss_pred chHHHHHHHhhCCC--cEEEEEeCcCc-----------------------HHHHHHcCCCccCEEEEE-eCCeEEeeeeC
Q psy11066 2 SLVMLQELASEFPD--VVFLKVDVDES-----------------------EDIAMAYDISSMPTFVFV-KSTAKVEQFSG 55 (70)
Q Consensus 2 ~~p~~~~~~~~~~~--i~~~~vd~~~~-----------------------~~~~~~~~i~~~Pt~~~~-~~g~~~~~~~g 55 (70)
+.|.+.++.+++++ +.++.++.+.. ..+++.|++.++|+++++ ++|+.+.++.|
T Consensus 46 ~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g 125 (154)
T 3kcm_A 46 EIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYGTTGVPETFVIDRHGVILKKVVG 125 (154)
T ss_dssp HHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHTCCSBCEEEEECTTSBEEEEEES
T ss_pred HHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhCCCCCCeEEEECCCCcEEEEEcC
Confidence 45788899998865 88999988875 348889999999987777 79999999999
Q ss_pred C---CHHHHHHHHHhhc
Q psy11066 56 A---NFDKLRSTVLANR 69 (70)
Q Consensus 56 ~---~~~~l~~~i~~~~ 69 (70)
. +.+.+.++|++..
T Consensus 126 ~~~~~~~~l~~~l~~l~ 142 (154)
T 3kcm_A 126 AMEWDHPEVIAFLNNEL 142 (154)
T ss_dssp CCCTTSHHHHHHHHTC-
T ss_pred CCccccHHHHHHHHHHH
Confidence 7 3558888887653
No 147
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=98.87 E-value=1.3e-08 Score=54.91 Aligned_cols=68 Identities=22% Similarity=0.250 Sum_probs=54.5
Q ss_pred chHHHHHHHhhCCC--c------EEEEEeCcC-cHHHHHHc-------------------------CCCccCEEEEE-eC
Q psy11066 2 SLVMLQELASEFPD--V------VFLKVDVDE-SEDIAMAY-------------------------DISSMPTFVFV-KS 46 (70)
Q Consensus 2 ~~p~~~~~~~~~~~--i------~~~~vd~~~-~~~~~~~~-------------------------~i~~~Pt~~~~-~~ 46 (70)
+.|.|.++.+++++ + .|+.|+++. ..+..++| ++.++|+++++ ++
T Consensus 77 ~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~ 156 (183)
T 3lwa_A 77 ESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDFVTDNGLDYPSIYDPPFMTAASLGGVPASVIPTTIVLDKQ 156 (183)
T ss_dssp HHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHHHHHTTCCSCEEECTTCGGGGGTTTCCTTCCSEEEEECTT
T ss_pred HHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHHHHHcCCCccEEECCcchHHHHhccCCCCCCCeEEEECCC
Confidence 45778888887743 7 999999988 56555555 78999987777 79
Q ss_pred CeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 47 TAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 47 g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
|+.+.++.|. +.++|.++|++++
T Consensus 157 G~i~~~~~g~~~~~~l~~~l~~ll 180 (183)
T 3lwa_A 157 HRPAAVFLREVTSKDVLDVALPLV 180 (183)
T ss_dssp SCEEEEECSCCCHHHHHHHHHHHH
T ss_pred CcEEEEEcCCCCHHHHHHHHHHHH
Confidence 9999999999 9999999998765
No 148
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=98.86 E-value=8.7e-09 Score=55.94 Aligned_cols=68 Identities=22% Similarity=0.323 Sum_probs=55.3
Q ss_pred chHHHHHHHhhCC--CcEEEEEeCc-----------------------------CcHHHHHHcCCCccCEEEEE-eCCeE
Q psy11066 2 SLVMLQELASEFP--DVVFLKVDVD-----------------------------ESEDIAMAYDISSMPTFVFV-KSTAK 49 (70)
Q Consensus 2 ~~p~~~~~~~~~~--~i~~~~vd~~-----------------------------~~~~~~~~~~i~~~Pt~~~~-~~g~~ 49 (70)
..|.+.++.++++ ++.++.|+++ ....+++.|++.++||++++ ++|+.
T Consensus 64 ~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i 143 (196)
T 2ywi_A 64 VQHELVRLANDYMPKGVSFVAINSNDAEQYPEDSPENMKKVAEELGYPFPYLYDETQEVAKAYDAACTPDFYIFDRDLKC 143 (196)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSCHHHHHHTCCEESEEEEEETTCBE
T ss_pred HHHHHHHHHHHHHhCCcEEEEEECCccccccccCHHHHHHHHHHcCCCceEEECCchHHHHHhCCCCCCeEEEEcCCCeE
Confidence 3577888888875 3889988873 45678999999999999999 68999
Q ss_pred Eee---------eeCC-CHHHHHHHHHhhc
Q psy11066 50 VEQ---------FSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 50 ~~~---------~~g~-~~~~l~~~i~~~~ 69 (70)
+.+ +.|. +.++|.+.|++++
T Consensus 144 ~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll 173 (196)
T 2ywi_A 144 VYRGQLDDSRPNNGIPVTGESIRAALDALL 173 (196)
T ss_dssp EEEECSSSCCTTTCCCCCCHHHHHHHHHHH
T ss_pred EEccccCcccccccCccCHHHHHHHHHHHH
Confidence 887 5677 8889998888764
No 149
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=98.86 E-value=4.6e-08 Score=51.77 Aligned_cols=66 Identities=15% Similarity=0.360 Sum_probs=54.8
Q ss_pred chHHHHHHHhhCCCcEEEEEeCc------------------Cc----------------------HHHHHHcCCCccCEE
Q psy11066 2 SLVMLQELASEFPDVVFLKVDVD------------------ES----------------------EDIAMAYDISSMPTF 41 (70)
Q Consensus 2 ~~p~~~~~~~~~~~i~~~~vd~~------------------~~----------------------~~~~~~~~i~~~Pt~ 41 (70)
+.|.+.++.++++++.++.|+++ +. .++++.|++.++||+
T Consensus 55 ~~~~l~~l~~~~~~v~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~v~~~P~~ 134 (165)
T 3ha9_A 55 MADLLDRLTEKYREISVIAIDFWTAEALKALGLNKPGYPPPDTPEMFRKFIANYGDPSWIMVMDDGSLVEKFNVRSIDYI 134 (165)
T ss_dssp HHHHHHHHHHHCTTEEEEEEECCSHHHHHHHTCCSTTSCCCCCHHHHHHHHHHHSCTTSEEEECCSHHHHHTTCCSSSEE
T ss_pred hHHHHHHHHHHcCCcEEEEEEecccccccccccccccCCCCCCHHHHHHHHHHcCCCCeeEEeChHHHHHHhCCCCceEE
Confidence 46889999999988999999887 34 278899999999999
Q ss_pred EEE-eCCeEEeeeeCC--CHHHHHHHHHhhc
Q psy11066 42 VFV-KSTAKVEQFSGA--NFDKLRSTVLANR 69 (70)
Q Consensus 42 ~~~-~~g~~~~~~~g~--~~~~l~~~i~~~~ 69 (70)
+++ ++|+.+. .|. +.+.|.+.|++++
T Consensus 135 ~lid~~G~i~~--~g~~~~~~~l~~~l~~l~ 163 (165)
T 3ha9_A 135 VIMDKSSNVLY--AGTTPSLGELESVIKSVQ 163 (165)
T ss_dssp EEEETTCCEEE--EEESCCHHHHHHHHHHC-
T ss_pred EEEcCCCcEEE--eCCCCCHHHHHHHHHHHh
Confidence 999 6898888 554 6889999998765
No 150
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=98.86 E-value=1.1e-09 Score=63.87 Aligned_cols=60 Identities=13% Similarity=0.191 Sum_probs=44.3
Q ss_pred chHHHHHHHhhCCCcEEEEEeC-cCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHH
Q psy11066 2 SLVMLQELASEFPDVVFLKVDV-DESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVL 66 (70)
Q Consensus 2 ~~p~~~~~~~~~~~i~~~~vd~-~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~ 66 (70)
+.|.+++++++++.+.+.++|. +++++++++|+|+++||+++ ||+ ++.|. +.++|.+++.
T Consensus 215 l~p~le~lA~~l~~Vd~d~~d~~~~~~~la~~~gI~~vPT~~i--~G~---~~~G~~~~~~L~~~l~ 276 (291)
T 3kp9_A 215 QKELFGAAFDQVPYVECSPNGPGTPQAQECTEAGITSYPTWII--NGR---TYTGVRSLEALAVASG 276 (291)
T ss_dssp HHHHHGGGGGGSCEEESCSSCSSSCCCHHHHTTTCCSTTEEEE--TTE---EEESCCCHHHHHHHTC
T ss_pred HHHHHHHHHHHcCEEEEeecCchhhHHHHHHHcCCcccCeEEE--CCE---EecCCCCHHHHHHHHC
Confidence 6789999987774222222222 34789999999999999554 886 38899 9999998874
No 151
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=98.86 E-value=3.6e-08 Score=51.54 Aligned_cols=66 Identities=15% Similarity=0.259 Sum_probs=52.7
Q ss_pred chHHHHHHHhhC-C--CcEEEEEeCcCcH-------------------------HHHHHcCCCccCEEEEE-eCCeEEee
Q psy11066 2 SLVMLQELASEF-P--DVVFLKVDVDESE-------------------------DIAMAYDISSMPTFVFV-KSTAKVEQ 52 (70)
Q Consensus 2 ~~p~~~~~~~~~-~--~i~~~~vd~~~~~-------------------------~~~~~~~i~~~Pt~~~~-~~g~~~~~ 52 (70)
..|.+.++.+++ . ++.++.|+.+..+ .+++.|++.++|+++++ ++|+.+.+
T Consensus 53 ~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 132 (150)
T 3fw2_A 53 SNSELREIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAKQYSIYKIPANILLSSDGKILAK 132 (150)
T ss_dssp HHHHHHHHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTTCCSSSEEEEECTTSBEEEE
T ss_pred HHHHHHHHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHHHHcCCCccCeEEEECCCCEEEEc
Confidence 457888898887 4 4899999888654 78999999999999999 79998888
Q ss_pred eeCCCHHHHHHHHHhhc
Q psy11066 53 FSGANFDKLRSTVLANR 69 (70)
Q Consensus 53 ~~g~~~~~l~~~i~~~~ 69 (70)
+. +.+.+.+.|++++
T Consensus 133 ~~--~~~~l~~~l~~ll 147 (150)
T 3fw2_A 133 NL--RGEELKKKIENIV 147 (150)
T ss_dssp SC--CHHHHHHHHHHHH
T ss_pred cC--CHHHHHHHHHHHH
Confidence 75 6666777766543
No 152
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.85 E-value=5.8e-09 Score=52.03 Aligned_cols=51 Identities=18% Similarity=0.238 Sum_probs=42.2
Q ss_pred CcEEEEEeCc--CcHHHHHHcCCCccCEEEEEeCCeEEeeeeCCCHHHHHHHHHhhc
Q psy11066 15 DVVFLKVDVD--ESEDIAMAYDISSMPTFVFVKSTAKVEQFSGANFDKLRSTVLANR 69 (70)
Q Consensus 15 ~i~~~~vd~~--~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~l~~~i~~~~ 69 (70)
++.|..+|++ ++++++++|+ .++|++ +.+|+.+ ...|.+.+.|.++|++++
T Consensus 43 ~i~~~~vdi~~~~~~el~~~~g-~~vP~l--~~~g~~~-~~~g~~~~~l~~~l~~~~ 95 (100)
T 1wjk_A 43 RFILQEVDITLPENSTWYERYK-FDIPVF--HLNGQFL-MMHRVNTSKLEKQLRKLS 95 (100)
T ss_dssp SSEEEEEETTSSTTHHHHHHSS-SSCSEE--EESSSEE-EESSCCHHHHHHHHHSSS
T ss_pred CCeEEEEECCCcchHHHHHHHC-CCCCEE--EECCEEE-EecCCCHHHHHHHHHHHH
Confidence 3899999998 7899999999 999986 4688765 455559999999998764
No 153
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=98.84 E-value=2.7e-08 Score=53.64 Aligned_cols=65 Identities=15% Similarity=0.223 Sum_probs=51.3
Q ss_pred hHHHHHHHhhCCCcEEEEEeC-----------------------cCcHHHHHHcCCCccCEEEEE-eCCeEEeeeeCC-C
Q psy11066 3 LVMLQELASEFPDVVFLKVDV-----------------------DESEDIAMAYDISSMPTFVFV-KSTAKVEQFSGA-N 57 (70)
Q Consensus 3 ~p~~~~~~~~~~~i~~~~vd~-----------------------~~~~~~~~~~~i~~~Pt~~~~-~~g~~~~~~~g~-~ 57 (70)
.|.+.++.++ ++.++.|++ +....+++.|++.++|+++++ ++|+.+.++.|. +
T Consensus 77 ~~~l~~l~~~--~v~vv~vs~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~ 154 (176)
T 3kh7_A 77 HPELTRLAEQ--GVVIYGINYKDDNAAAIKWLNELHNPYLLSISDADGTLGLDLGVYGAPETYLIDKQGIIRHKIVGVVD 154 (176)
T ss_dssp HHHHHHHHHT--TCEEEEEEESCCHHHHHHHHHHTTCCCSEEEEETTCHHHHHHTCCSSCEEEEECTTCBEEEEEESCCC
T ss_pred HHHHHHHHHC--CCEEEEEeCCCCHHHHHHHHHHcCCCCceEEECCcchHHHHcCCCCCCeEEEECCCCeEEEEEcCCCC
Confidence 4677777766 577777664 345678899999999988888 799999999999 9
Q ss_pred HHHHHHHHHhhc
Q psy11066 58 FDKLRSTVLANR 69 (70)
Q Consensus 58 ~~~l~~~i~~~~ 69 (70)
.+.+.+.|.+.+
T Consensus 155 ~~~l~~~l~~~l 166 (176)
T 3kh7_A 155 QKVWREQLAPLY 166 (176)
T ss_dssp HHHHHHHTHHHH
T ss_pred HHHHHHHHHHHH
Confidence 888888777654
No 154
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=98.83 E-value=2.6e-08 Score=53.84 Aligned_cols=68 Identities=21% Similarity=0.280 Sum_probs=54.0
Q ss_pred chHHHHHHHhhCCC-cEEEEEeC-----------------------------cCcHHHHHHcCCCccCEEEEE-eCCeEE
Q psy11066 2 SLVMLQELASEFPD-VVFLKVDV-----------------------------DESEDIAMAYDISSMPTFVFV-KSTAKV 50 (70)
Q Consensus 2 ~~p~~~~~~~~~~~-i~~~~vd~-----------------------------~~~~~~~~~~~i~~~Pt~~~~-~~g~~~ 50 (70)
..|.+.++.+++++ +.++.|++ +....+++.|++.++||++++ ++|+.+
T Consensus 51 ~~~~l~~l~~~~~~~~~~v~v~~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~ 130 (188)
T 2cvb_A 51 SIGELVALAERYRGKVAFVGINANDYEKYPEDAPEKMAAFAEEHGIFFPYLLDETQEVAKAYRALRTPEVFLFDERRLLR 130 (188)
T ss_dssp THHHHHHHHHHTTTTEEEEEEECCCTTTCGGGSHHHHHHHHHHHTCCSCEEECSSSHHHHHTTCCEESEEEEECTTCBEE
T ss_pred HHHHHHHHHHHhhcCeEEEEEEcCccccccccCHHHHHHHHHHhCCCceEEECCcchHHHHcCCCCCCeEEEECCCCcEE
Confidence 46889999999977 88888887 345578999999999999999 789888
Q ss_pred ee--------eeCC-CHHHHHHHHHhhc
Q psy11066 51 EQ--------FSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 51 ~~--------~~g~-~~~~l~~~i~~~~ 69 (70)
.+ +.|. +.++|.+.|++++
T Consensus 131 ~~g~~~~~~~~~g~~~~~~l~~~i~~ll 158 (188)
T 2cvb_A 131 YHGRVNDNPKDPSKVQSHDLEAAIEALL 158 (188)
T ss_dssp EEECSSSCTTCGGGCCCCHHHHHHHHHH
T ss_pred EEEecCCccccccccCHHHHHHHHHHHH
Confidence 77 2233 5678888887764
No 155
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=98.81 E-value=2.4e-08 Score=59.45 Aligned_cols=68 Identities=9% Similarity=0.071 Sum_probs=57.4
Q ss_pred chHHHHHHHhhCC--CcEEEEEeCcC---------------------------cHHHHHHcCCCccCEEEEE-eCCeEEe
Q psy11066 2 SLVMLQELASEFP--DVVFLKVDVDE---------------------------SEDIAMAYDISSMPTFVFV-KSTAKVE 51 (70)
Q Consensus 2 ~~p~~~~~~~~~~--~i~~~~vd~~~---------------------------~~~~~~~~~i~~~Pt~~~~-~~g~~~~ 51 (70)
+.|.|.++.++++ ++.++.|++++ ...+++.|++.++||++++ ++|+++.
T Consensus 100 ~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~ygV~~~Pt~~lID~~G~Iv~ 179 (352)
T 2hyx_A 100 AIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWTNYRNRYWPAEYLIDATGTVRH 179 (352)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHHTTCCEESEEEEECTTSBEEE
T ss_pred HHHHHHHHHHHhhcCCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHHHcCCCccCEEEEEeCCCeEEE
Confidence 4688889988885 48899887642 3578899999999999999 7999999
Q ss_pred eeeCC-CHHHHHHHHHhhc
Q psy11066 52 QFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 52 ~~~g~-~~~~l~~~i~~~~ 69 (70)
++.|. +.+.+.++|++++
T Consensus 180 ~~~G~~~~~~l~~~I~~lL 198 (352)
T 2hyx_A 180 IKFGEGDYNVTETLVRQLL 198 (352)
T ss_dssp EEESBCCHHHHHHHHHHHH
T ss_pred EEcCCCCHHHHHHHHHHHH
Confidence 99998 8999999888764
No 156
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=98.76 E-value=6.1e-08 Score=51.03 Aligned_cols=63 Identities=14% Similarity=0.340 Sum_probs=51.2
Q ss_pred chHHHHHHHhhCCC--cEEEEEeCcCcHH-----------------------HHHHcCCCccCEEEEE-eCCeEEeeeeC
Q psy11066 2 SLVMLQELASEFPD--VVFLKVDVDESED-----------------------IAMAYDISSMPTFVFV-KSTAKVEQFSG 55 (70)
Q Consensus 2 ~~p~~~~~~~~~~~--i~~~~vd~~~~~~-----------------------~~~~~~i~~~Pt~~~~-~~g~~~~~~~g 55 (70)
..|.+.++.+++++ +.++.|+++...+ +++.|++.++||++++ ++|+.+.++.|
T Consensus 53 ~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g 132 (152)
T 2lrt_A 53 HNLALRELYNKYASQGFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYISLYNVTNLPSVFLVNRNNELSARGEN 132 (152)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHHHHTCCSCSEEEEEETTTEEEEETTT
T ss_pred HHHHHHHHHHHhccCCeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHHHcCcccCceEEEECCCCeEEEecCC
Confidence 35778888888753 8999999887654 8899999999999999 69999999999
Q ss_pred C-CHHHHHHH
Q psy11066 56 A-NFDKLRST 64 (70)
Q Consensus 56 ~-~~~~l~~~ 64 (70)
. +.++....
T Consensus 133 ~~~~e~~~~~ 142 (152)
T 2lrt_A 133 IKDLDEAIKK 142 (152)
T ss_dssp CSCHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8 76654433
No 157
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.72 E-value=1.3e-08 Score=48.58 Aligned_cols=56 Identities=16% Similarity=0.147 Sum_probs=40.1
Q ss_pred chHHHHHHHhhCCC-cEEEEEeCc-CcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC--CHHHH
Q psy11066 2 SLVMLQELASEFPD-VVFLKVDVD-ESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA--NFDKL 61 (70)
Q Consensus 2 ~~p~~~~~~~~~~~-i~~~~vd~~-~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~--~~~~l 61 (70)
+.|.++++.++++. +.++.+|.+ +..+++++|+++++||+++ +|+.+. .|. +.++|
T Consensus 18 ~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~gv~~vPt~~i--~g~~~~--~G~~~~~~~l 77 (80)
T 2k8s_A 18 AEQAVANAIDPSKYTVEIVHLGTDKARIAEAEKAGVKSVPALVI--DGAAFH--INFGAGIDDL 77 (80)
T ss_dssp HHHHHHHHSCTTTEEEEEEETTTCSSTHHHHHHHTCCEEEEEEE--TTEEEE--EEEEEEHHHH
T ss_pred HHHHHHHHHHhcCCeEEEEEecCChhhHHHHHHcCCCcCCEEEE--CCEEEE--eccCcCHHHh
Confidence 45777878777643 666666665 5788899999999999887 887654 333 45554
No 158
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=98.72 E-value=2.1e-07 Score=50.09 Aligned_cols=68 Identities=16% Similarity=0.335 Sum_probs=54.4
Q ss_pred chHHHHHHHhhCC--CcEEEEEeCcCc-----HHHHHHcCCC-----------------------ccCEEEEE-eCCeEE
Q psy11066 2 SLVMLQELASEFP--DVVFLKVDVDES-----EDIAMAYDIS-----------------------SMPTFVFV-KSTAKV 50 (70)
Q Consensus 2 ~~p~~~~~~~~~~--~i~~~~vd~~~~-----~~~~~~~~i~-----------------------~~Pt~~~~-~~g~~~ 50 (70)
+.|.+.++.++++ ++.++.|+++.. ..+.+++++. ++|+++++ ++|+.+
T Consensus 78 ~~~~l~~l~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~P~~~lid~~G~i~ 157 (186)
T 1jfu_A 78 EMPALDELQGKLSGPNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAIGRALGMPTSVLVDPQGCEI 157 (186)
T ss_dssp HHHHHHHHHHHHCBTTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTTTCCSSSSEEEEECTTSBEE
T ss_pred HHHHHHHHHHHhccCCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhccccccCCCCEEEEECCCCCEE
Confidence 3578888888876 488888888754 4566777774 89999999 799999
Q ss_pred eeeeCC-C--HHHHHHHHHhhc
Q psy11066 51 EQFSGA-N--FDKLRSTVLANR 69 (70)
Q Consensus 51 ~~~~g~-~--~~~l~~~i~~~~ 69 (70)
.++.|. + .+++.++|++.+
T Consensus 158 ~~~~g~~~~~~~~l~~~l~~ll 179 (186)
T 1jfu_A 158 ATIAGPAEWASEDALKLIRAAT 179 (186)
T ss_dssp EEEESCCCTTSHHHHHHHHHHH
T ss_pred EEEecCCccCHHHHHHHHHHHh
Confidence 999998 5 678888888765
No 159
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=98.71 E-value=1.9e-08 Score=54.83 Aligned_cols=45 Identities=24% Similarity=0.293 Sum_probs=37.6
Q ss_pred HHHhhCC-CcEEEEEeCcCcHHHHHHc--------CCCccCEEEEEe-CCeEEee
Q psy11066 8 ELASEFP-DVVFLKVDVDESEDIAMAY--------DISSMPTFVFVK-STAKVEQ 52 (70)
Q Consensus 8 ~~~~~~~-~i~~~~vd~~~~~~~~~~~--------~i~~~Pt~~~~~-~g~~~~~ 52 (70)
++++.+. ++.+++||.++.+++++.| ++.++||++++. +|+++..
T Consensus 66 ~va~~l~~~fv~ikVD~de~~~l~~~y~~~~q~~~gv~g~Pt~v~l~~dG~~v~~ 120 (173)
T 3ira_A 66 EVAGLMNEAFVSIKVDREERPDIDNIYMTVCQIILGRGGWPLNIIMTPGKKPFFA 120 (173)
T ss_dssp HHHHHHHHHCEEEEEETTTCHHHHHHHHHHHHHHHSCCCSSEEEEECTTSCEEEE
T ss_pred HHHHHHHhcCceeeeCCcccCcHHHHHHHHHHHHcCCCCCcceeeECCCCCceee
Confidence 4444443 4889999999999999998 999999999995 8988876
No 160
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=98.67 E-value=1.5e-07 Score=52.38 Aligned_cols=68 Identities=21% Similarity=0.280 Sum_probs=53.7
Q ss_pred chHHHHHHHhhCCC--cEEEEEeC-----------------------------cCcHHHHHHcCCCccCEEEEE-eCCeE
Q psy11066 2 SLVMLQELASEFPD--VVFLKVDV-----------------------------DESEDIAMAYDISSMPTFVFV-KSTAK 49 (70)
Q Consensus 2 ~~p~~~~~~~~~~~--i~~~~vd~-----------------------------~~~~~~~~~~~i~~~Pt~~~~-~~g~~ 49 (70)
..|.|.++.+++++ +.++.|++ |....+++.|++.++|+++++ ++|+.
T Consensus 77 ~~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~v~~~P~~~liD~~G~i 156 (218)
T 3u5r_E 77 IREALAKFAGDYAGQGLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDASQSVAKAYGAACTPDFFLYDRERRL 156 (218)
T ss_dssp THHHHHHHHHHHTTTTEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTTCHHHHHHTCCEESEEEEECTTCBE
T ss_pred HHHHHHHHHHHHHhCCcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCccHHHHHcCCCCCCeEEEECCCCcE
Confidence 46889999998854 89999988 345678999999999999999 78988
Q ss_pred Eeeee---------CC-CHHHHHHHHHhhc
Q psy11066 50 VEQFS---------GA-NFDKLRSTVLANR 69 (70)
Q Consensus 50 ~~~~~---------g~-~~~~l~~~i~~~~ 69 (70)
+.+.. |. +.++|.+.|++.+
T Consensus 157 ~~~g~~d~~~~~~~~~~~~~~l~~~i~~ll 186 (218)
T 3u5r_E 157 VYHGQFDDARPGNGKDVTGADLRAAVDAVL 186 (218)
T ss_dssp EEEECSSSCCTTSCCCCCCHHHHHHHHHHH
T ss_pred EEeccccccccccccccCHHHHHHHHHHHH
Confidence 75532 23 5678888888765
No 161
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=98.66 E-value=5.9e-09 Score=55.67 Aligned_cols=55 Identities=18% Similarity=0.280 Sum_probs=38.6
Q ss_pred chHHHHHHHh--hCCCcEEEEEeCc-CcHHHHHHcCCCccCEEEEEe-CCeEEeeeeCC
Q psy11066 2 SLVMLQELAS--EFPDVVFLKVDVD-ESEDIAMAYDISSMPTFVFVK-STAKVEQFSGA 56 (70)
Q Consensus 2 ~~p~~~~~~~--~~~~i~~~~vd~~-~~~~~~~~~~i~~~Pt~~~~~-~g~~~~~~~g~ 56 (70)
|.|.+.+..+ ++.+..|+.|++| +..+.+.+|++.++||+++|+ +|+++.++.|.
T Consensus 62 m~p~~~~~~~~~~~~~~~fv~V~vD~e~~~~~~~~~v~~~PT~~f~~~~G~~v~~~~G~ 120 (151)
T 3ph9_A 62 LKKVFAQNEEIQEMAQNKFIMLNLMHETTDKNLSPDGQYVPRIMFVDPSLTVRADIAGR 120 (151)
T ss_dssp HHHHHHHCHHHHHHHHHTCEEEEESSCCSCGGGCTTCCCSSEEEEECTTSCBCTTCCCS
T ss_pred HHHHHhcCHHHHHHhhcCeEEEEecCCchhhHhhcCCCCCCEEEEECCCCCEEEEEeCC
Confidence 4566654321 2212345556554 345678899999999999997 99999999995
No 162
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.66 E-value=8.7e-08 Score=45.77 Aligned_cols=60 Identities=18% Similarity=0.308 Sum_probs=45.9
Q ss_pred chHHHHHHHhhCCCcEEEEEeCcCc----HHHHHHcC--CCccCEEEEEeCCeEEeeeeCCCHHHHHHHHHhh
Q psy11066 2 SLVMLQELASEFPDVVFLKVDVDES----EDIAMAYD--ISSMPTFVFVKSTAKVEQFSGANFDKLRSTVLAN 68 (70)
Q Consensus 2 ~~p~~~~~~~~~~~i~~~~vd~~~~----~~~~~~~~--i~~~Pt~~~~~~g~~~~~~~g~~~~~l~~~i~~~ 68 (70)
+.|.+++++.+++++.+..+|++++ +++++.++ +.++|++ |.+|+.+. |. ++|.+++++.
T Consensus 17 ~~~~l~~l~~~~~~i~~~~vdi~~~~~~~~~l~~~~~~~~~~vP~i--~~~g~~i~---~~--~~l~~~~~~~ 82 (85)
T 1ego_A 17 AKDLAEKLSNERDDFQYQYVDIRAEGITKEDLQQKAGKPVETVPQI--FVDQQHIG---GY--TDFAAWVKEN 82 (85)
T ss_dssp HHHHHHHHHHHHSSCEEEEECHHHHTCCSHHHHHHTCCCSCCSCEE--EETTEEEE---SS--HHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCceEEEEecccChHHHHHHHHHhCCCCceeCeE--EECCEEEE---CH--HHHHHHHHHh
Confidence 4678888888877899999998765 37899999 9999998 45887653 32 5677777653
No 163
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=98.65 E-value=1.7e-07 Score=48.53 Aligned_cols=64 Identities=17% Similarity=0.234 Sum_probs=49.0
Q ss_pred chHHHHH---HHhhC--CCcEEEEEeCcCcHH------------------------HHHHcCCCccCEEEEE-eCCeEEe
Q psy11066 2 SLVMLQE---LASEF--PDVVFLKVDVDESED------------------------IAMAYDISSMPTFVFV-KSTAKVE 51 (70)
Q Consensus 2 ~~p~~~~---~~~~~--~~i~~~~vd~~~~~~------------------------~~~~~~i~~~Pt~~~~-~~g~~~~ 51 (70)
+.|.+.+ +.+++ .++.++.|+.+...+ +++.|++.++||++++ ++|+.+.
T Consensus 49 ~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~~P~~~lid~~G~i~~ 128 (142)
T 3eur_A 49 MIEGLKASPVINGFTAAKKLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKELVIKNKNLYDLRAIPTLYLLDKNKTVLL 128 (142)
T ss_dssp HHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTTCSCCTTCSEEEEECTTCBEEE
T ss_pred HHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHHHHHHHHhcccccccccCccchhhhhhhcCCCcCCeEEEECCCCcEEe
Confidence 3577777 77776 348899998887633 4778999999999999 6898888
Q ss_pred eeeCCCHHHHHHHHHh
Q psy11066 52 QFSGANFDKLRSTVLA 67 (70)
Q Consensus 52 ~~~g~~~~~l~~~i~~ 67 (70)
+..| .++|+++|++
T Consensus 129 ~~~~--~~~l~~~l~e 142 (142)
T 3eur_A 129 KDAT--LQKVEQYLAE 142 (142)
T ss_dssp EEEC--HHHHHHHHHC
T ss_pred cCCC--HHHHHHHHhC
Confidence 7664 6777777753
No 164
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=98.64 E-value=7.4e-08 Score=49.72 Aligned_cols=65 Identities=15% Similarity=0.259 Sum_probs=47.1
Q ss_pred hHHHHH---HHhhCC--CcEEEEEeCcCcHHH------------------------HHHcCCCccCEEEEE-eCCeEEee
Q psy11066 3 LVMLQE---LASEFP--DVVFLKVDVDESEDI------------------------AMAYDISSMPTFVFV-KSTAKVEQ 52 (70)
Q Consensus 3 ~p~~~~---~~~~~~--~i~~~~vd~~~~~~~------------------------~~~~~i~~~Pt~~~~-~~g~~~~~ 52 (70)
.|.+.+ +.++++ ++.++.|+.+...+. ++.|++.++||++++ ++|+.+.+
T Consensus 46 ~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 125 (142)
T 3ewl_A 46 EKLFAEIPAFVEMVENGTLRVLAIYPDENREEWATKAVYMPQGWIVGWNKAGDIRTRQLYDIRATPTIYLLDGRKRVILK 125 (142)
T ss_dssp HHHHHTCHHHHHHHHHTSEEEEEEECSSCHHHHHHHHTTSCTTCEEEECTTCHHHHTTCSCCCSSSEEEEECTTCBEEEC
T ss_pred HHHHHHhHHHHHHhccCCeEEEEEEecCCHHHHHHHHHHcCCCcceeeCCccchhhHHHcCCCCCCeEEEECCCCCEEec
Confidence 355555 666653 488999988865543 348999999999999 68887762
Q ss_pred eeCCCHHHHHHHHHhhc
Q psy11066 53 FSGANFDKLRSTVLANR 69 (70)
Q Consensus 53 ~~g~~~~~l~~~i~~~~ 69 (70)
+.+.++|.++|+++.
T Consensus 126 --~~~~~~l~~~l~~~~ 140 (142)
T 3ewl_A 126 --DTSMEQLIDYLATQA 140 (142)
T ss_dssp --SCCHHHHHHHHHC--
T ss_pred --CCCHHHHHHHHHHHc
Confidence 238899999998764
No 165
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=98.60 E-value=4.5e-07 Score=48.05 Aligned_cols=67 Identities=12% Similarity=0.217 Sum_probs=52.8
Q ss_pred hHHHHHHHhhC------CCcEEEEEeCcCc----------------------------HHHHHHcCCCccC---------
Q psy11066 3 LVMLQELASEF------PDVVFLKVDVDES----------------------------EDIAMAYDISSMP--------- 39 (70)
Q Consensus 3 ~p~~~~~~~~~------~~i~~~~vd~~~~----------------------------~~~~~~~~i~~~P--------- 39 (70)
.|.+.++.+++ .++.++.|+++.. ..+++.|++...|
T Consensus 46 ~~~l~~l~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~v~~~p~~~~~~~~~ 125 (171)
T 2rli_A 46 LEKLVQVVRQLEAEPGLPPVQPVFITVDPERDDVEAMARYVQDFHPRLLGLTGSTKQVAQASHSYRVYYNAGPKDEDQDY 125 (171)
T ss_dssp HHHHHHHHHHHHHSTTSCCEEEEEEESCSTTCCHHHHHHHHHTTCTTCCEEECCHHHHHHHHHHSCCCCEECCCCSSCCC
T ss_pred HHHHHHHHHHHhhccCCCceEEEEEEECCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHHHHHHHhCeEEEecCCCCCCCe
Confidence 56778887776 3588888887631 2578899999988
Q ss_pred ------EEEEE-eCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 40 ------TFVFV-KSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 40 ------t~~~~-~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
+++++ ++|+.+.++.|. +.+.+.+.|++++
T Consensus 126 ~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 163 (171)
T 2rli_A 126 IVDHSIAIYLLNPDGLFTDYYGRSRSAEQISDSVRRHM 163 (171)
T ss_dssp CEECCCEEEEECTTSCEEEEEESSCCHHHHHHHHHHHH
T ss_pred EEeccceEEEECCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 76666 799999999998 8888988887764
No 166
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=98.56 E-value=4.1e-08 Score=49.43 Aligned_cols=62 Identities=8% Similarity=0.091 Sum_probs=44.7
Q ss_pred chHHHHHHHhhCCCcEEEEEeCcCc-----HHHHHHcCCCccCEEEEEeCCeEEeeeeCC----CHHHHHHHHHhh
Q psy11066 2 SLVMLQELASEFPDVVFLKVDVDES-----EDIAMAYDISSMPTFVFVKSTAKVEQFSGA----NFDKLRSTVLAN 68 (70)
Q Consensus 2 ~~p~~~~~~~~~~~i~~~~vd~~~~-----~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~----~~~~l~~~i~~~ 68 (70)
+.|.|++++.+ ..++.+|.+.. ..+++.|++.++||+ |.+|+.+..+.|. +.+.|.++|++.
T Consensus 36 ~~~~l~~~~~~---~~~v~v~~~~~~~~~~~~l~~~~~v~~~Pt~--~~~g~~v~~~~~~~~~~~~~~l~~~l~~~ 106 (116)
T 2e7p_A 36 VKQLLTQVGAS---YKVVELDELSDGSQLQSALAHWTGRGTVPNV--FIGGKQIGGCDTVVEKHQRNELLPLLQDA 106 (116)
T ss_dssp HHHHHHHHTCC---CEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EETTEEEECHHHHHHHHHTTCHHHHHHHT
T ss_pred HHHHHHHcCCC---eEEEEccCCCChHHHHHHHHHHhCCCCcCEE--EECCEEECChHHHHHHHhCChHHHHHHHc
Confidence 35666666543 45666666655 568999999999999 5689988877664 456788888764
No 167
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=98.53 E-value=1.7e-06 Score=45.79 Aligned_cols=68 Identities=10% Similarity=0.178 Sum_probs=53.2
Q ss_pred chHHHHHHHhhCCC-cEEEEEeC--cCcHHHHHHcCCCc--cCEEEEEeC-Ce-EEeeee-CC-CHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPD-VVFLKVDV--DESEDIAMAYDISS--MPTFVFVKS-TA-KVEQFS-GA-NFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~-i~~~~vd~--~~~~~~~~~~~i~~--~Pt~~~~~~-g~-~~~~~~-g~-~~~~l~~~i~~~~ 69 (70)
+.+.+.++++++.+ +.|+.+|. +......+.||+.. +|+++++.. +. ....+. +. +.+.|.+|++.++
T Consensus 50 ~~~~~~~vAk~fkgki~Fv~vd~~~~~~~~~l~~fGl~~~~~P~v~i~~~~~~~~Ky~~~~~~~t~~~i~~Fv~d~l 126 (147)
T 3bj5_A 50 KLSNFKTAAESFKGKILFAFIDSDHTDNQRILEFFGLKKEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFL 126 (147)
T ss_dssp HHHHHHHHHHTTTTTCEEEEECTTCGGGHHHHHHTTCCGGGCSEEEEEECSSSCEEECCSCCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCceEEEEEecchHhHHHHHHHcCCCcccCCEEEEEecccccccCCCCcccCCHHHHHHHHHHHH
Confidence 35778999999976 99999999 66667889999996 999999864 22 223333 55 8999999998765
No 168
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=98.53 E-value=1.9e-06 Score=48.10 Aligned_cols=68 Identities=10% Similarity=0.252 Sum_probs=54.1
Q ss_pred chHHHHHHHhhCCC-cEEEEEeCcC--cHHHHHHcCCC--ccCEEEEEeCCe-EEeeee-CC-CHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPD-VVFLKVDVDE--SEDIAMAYDIS--SMPTFVFVKSTA-KVEQFS-GA-NFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~-i~~~~vd~~~--~~~~~~~~~i~--~~Pt~~~~~~g~-~~~~~~-g~-~~~~l~~~i~~~~ 69 (70)
+.+.|.++++++.+ +.|+.+|.+. .+.+++.||+. .+|+++++..+. ....+. |. +.+.|.+|++.++
T Consensus 149 ~~~~~~~vAk~~k~~i~F~~vd~~~~~~~~~l~~fgl~~~~~P~~~i~~~~~~~ky~~~~~~~t~~~i~~Fv~~~~ 224 (227)
T 4f9z_D 149 NMHRYQKAAKLFQGKILFILVDSGMKENGKVISFFKLKESQLPALAIYQTLDDEWDTLPTAEVSVEHVQNFCDGFL 224 (227)
T ss_dssp HHHHHHHHHHHTTTTCEEEEEETTSGGGHHHHHHTTCCGGGCSEEEEEESSSCCEEEETTCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCEEEEEeCCccHhHHHHHHHcCCCcccCCEEEEEECCCCccccCCcCCCCHHHHHHHHHHHh
Confidence 35788999999976 9999999974 67788999998 899999997432 233332 56 9999999998875
No 169
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=98.53 E-value=2.8e-07 Score=47.91 Aligned_cols=54 Identities=20% Similarity=0.270 Sum_probs=43.5
Q ss_pred chHHHHHHHhhCC---CcEEEEEeCcCc------------------------HHHHHHcCCCccCEEEEEe--CCeEEee
Q psy11066 2 SLVMLQELASEFP---DVVFLKVDVDES------------------------EDIAMAYDISSMPTFVFVK--STAKVEQ 52 (70)
Q Consensus 2 ~~p~~~~~~~~~~---~i~~~~vd~~~~------------------------~~~~~~~~i~~~Pt~~~~~--~g~~~~~ 52 (70)
+.|.+.++.++++ ++.++.|+++.. ..+++.|++.++||++++. +|+.+.+
T Consensus 46 ~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~Pt~~lid~~~G~i~~~ 125 (146)
T 1o8x_A 46 FTPQLIEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNVESIPTLIGVDADSGDVVTT 125 (146)
T ss_dssp HHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTTCCSSSEEEEEETTTCCEEES
T ss_pred HHHHHHHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhCCCCCCEEEEEECCCCeEEEe
Confidence 4678889988876 488888887753 4688999999999999997 8988776
Q ss_pred eeC
Q psy11066 53 FSG 55 (70)
Q Consensus 53 ~~g 55 (70)
..+
T Consensus 126 ~~~ 128 (146)
T 1o8x_A 126 RAR 128 (146)
T ss_dssp CHH
T ss_pred cch
Confidence 543
No 170
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=98.53 E-value=8.8e-07 Score=45.84 Aligned_cols=64 Identities=16% Similarity=0.217 Sum_probs=49.3
Q ss_pred chHHHHHHHhhCCC--cEEEEEeCcCc--------------------------HHHHHHcCCCccCEEEEE-eCCeEEee
Q psy11066 2 SLVMLQELASEFPD--VVFLKVDVDES--------------------------EDIAMAYDISSMPTFVFV-KSTAKVEQ 52 (70)
Q Consensus 2 ~~p~~~~~~~~~~~--i~~~~vd~~~~--------------------------~~~~~~~~i~~~Pt~~~~-~~g~~~~~ 52 (70)
..|.+.++.+++++ +.++.|+.+.. ..+++.|++.++|+++++ ++|+.+.+
T Consensus 50 ~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~ 129 (143)
T 4fo5_A 50 RNVQLANEVNKFGPDKIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKKYDLRKGFKNFLINDEGVIIAA 129 (143)
T ss_dssp HHHHHHHHHTTSCTTTEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHHTTGGGCCCEEEECTTSBEEEE
T ss_pred HHHHHHHHHHHhCcCCEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHHcCCCCCCcEEEECCCCEEEEc
Confidence 45788999999863 88888887743 246789999999999999 58988876
Q ss_pred eeCCCHHHHHHHHHh
Q psy11066 53 FSGANFDKLRSTVLA 67 (70)
Q Consensus 53 ~~g~~~~~l~~~i~~ 67 (70)
.. +.+++.+.|++
T Consensus 130 ~~--~~~~l~~~l~~ 142 (143)
T 4fo5_A 130 NV--TPEKLTEILKA 142 (143)
T ss_dssp SC--CHHHHHHHHTC
T ss_pred cC--CHHHHHHHHHh
Confidence 54 46677777654
No 171
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=98.53 E-value=4.6e-07 Score=47.65 Aligned_cols=67 Identities=16% Similarity=0.348 Sum_probs=51.6
Q ss_pred hHHHHHHHhhC------CCcEEEEEeCcCc----------------------------HHHHHHcCCCccC---------
Q psy11066 3 LVMLQELASEF------PDVVFLKVDVDES----------------------------EDIAMAYDISSMP--------- 39 (70)
Q Consensus 3 ~p~~~~~~~~~------~~i~~~~vd~~~~----------------------------~~~~~~~~i~~~P--------- 39 (70)
.|.+.++.+++ .++.++.|++|.. ..+++.|++..+|
T Consensus 43 ~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~~d~~~~~~~~~~~~~~~~~~l~~~~d~~~~~~~~~~v~~~p~~~~~~~~~ 122 (164)
T 2ggt_A 43 LEKMIQVVDEIDSITTLPDLTPLFISIDPERDTKEAIANYVKEFSPKLVGLTGTREEVDQVARAYRVYYSPGPKDEDEDY 122 (164)
T ss_dssp HHHHHHHHHHHHHSSSSCCEEEEEEESCTTTCCHHHHHHHHHTTCSSCEEEECCHHHHHHHHHTTTCCEEEEEECTTSCE
T ss_pred HHHHHHHHHHHhhccCCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCeEEEeCCHHHHHHHHHhcCeEEEecCCCCCCCe
Confidence 46677777665 2678888777642 2478899999999
Q ss_pred ------EEEEE-eCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 40 ------TFVFV-KSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 40 ------t~~~~-~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
+++++ ++|+.+.++.|. +.++|.+.|++.+
T Consensus 123 ~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 160 (164)
T 2ggt_A 123 IVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAASIATHM 160 (164)
T ss_dssp EEEECCEEEEECTTSCEEEEEETTCCHHHHHHHHHHHH
T ss_pred eEeccceEEEECCCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence 66666 799999999998 8899988888765
No 172
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.49 E-value=1e-06 Score=46.64 Aligned_cols=53 Identities=15% Similarity=0.174 Sum_probs=44.4
Q ss_pred hHHHHHHHhhCC--CcEEEEEeCc---------------------CcHHHHHHcCCCc----cCEEEEE-eCCeEEeeee
Q psy11066 3 LVMLQELASEFP--DVVFLKVDVD---------------------ESEDIAMAYDISS----MPTFVFV-KSTAKVEQFS 54 (70)
Q Consensus 3 ~p~~~~~~~~~~--~i~~~~vd~~---------------------~~~~~~~~~~i~~----~Pt~~~~-~~g~~~~~~~ 54 (70)
.|.+.++.++++ ++.++.|+.| ....+++.|++.+ +|+++++ ++|+.+.++.
T Consensus 49 ~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~~~P~~~lid~~G~i~~~~~ 128 (161)
T 3drn_A 49 ASAFRDNWDLLKDYDVVVIGVSSDDINSHKRFKEKYKLPFILVSDPDKKIRELYGAKGFILPARITFVIDKKGIIRHIYN 128 (161)
T ss_dssp HHHHHHTHHHHHTTCEEEEEEESCCHHHHHHHHHHTTCCSEEEECTTSHHHHHTTCCCSSSCCCEEEEECTTSBEEEEEE
T ss_pred HHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHcCCCCcCcccceEEEECCCCEEEEEEe
Confidence 567888888774 3888888876 4567899999999 9999999 6999999999
Q ss_pred C
Q psy11066 55 G 55 (70)
Q Consensus 55 g 55 (70)
|
T Consensus 129 g 129 (161)
T 3drn_A 129 S 129 (161)
T ss_dssp C
T ss_pred c
Confidence 9
No 173
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=97.88 E-value=1.5e-08 Score=53.41 Aligned_cols=67 Identities=15% Similarity=0.205 Sum_probs=48.0
Q ss_pred chHHHHH-HHhhCC---CcEEEEEeCcCcHHHHHHcC------------------------CCccCEEEEE-eCCeEEee
Q psy11066 2 SLVMLQE-LASEFP---DVVFLKVDVDESEDIAMAYD------------------------ISSMPTFVFV-KSTAKVEQ 52 (70)
Q Consensus 2 ~~p~~~~-~~~~~~---~i~~~~vd~~~~~~~~~~~~------------------------i~~~Pt~~~~-~~g~~~~~ 52 (70)
+.|.+.+ +.+++. ++.++.|++++.++..++|. +.++||++++ ++|+.+.+
T Consensus 51 ~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~P~~~lid~~G~i~~~ 130 (159)
T 2ls5_A 51 EMPFIEKDIWLKHKDNADFALIGIDRDEPLEKVLAFAKSTGVTYPLGLDPGADIFAKYALRDAGITRNVLIDREGKIVKL 130 (159)
Confidence 3466766 666665 38888888776544444443 6779999999 89999999
Q ss_pred eeCCCHHHHHHHHHhh
Q psy11066 53 FSGANFDKLRSTVLAN 68 (70)
Q Consensus 53 ~~g~~~~~l~~~i~~~ 68 (70)
+.|.+.+++.++++++
T Consensus 131 ~~g~~~~~l~~~l~~l 146 (159)
T 2ls5_A 131 TRLYNEEEFASLVQQI 146 (159)
Confidence 8888666777777654
No 174
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=98.49 E-value=5.5e-07 Score=46.50 Aligned_cols=53 Identities=15% Similarity=0.319 Sum_probs=42.8
Q ss_pred chHHHHHHHhhCC---CcEEEEEeCcCc------------------------HHHHHHcCCCccCEEEEEe--CCeEEee
Q psy11066 2 SLVMLQELASEFP---DVVFLKVDVDES------------------------EDIAMAYDISSMPTFVFVK--STAKVEQ 52 (70)
Q Consensus 2 ~~p~~~~~~~~~~---~i~~~~vd~~~~------------------------~~~~~~~~i~~~Pt~~~~~--~g~~~~~ 52 (70)
+.|.+.++.++++ ++.++.++++.. ..+++.|++.++||++++. +|+.+.+
T Consensus 46 ~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~Pt~~lid~~~G~i~~~ 125 (144)
T 1o73_A 46 FTPVLAEFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFGVESIPTLITINADTGAIIGT 125 (144)
T ss_dssp HHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHTCCSSSEEEEEETTTCCEEES
T ss_pred HHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcCCCCCCEEEEEECCCCeEEec
Confidence 4688888888875 488888887753 4688999999999999997 8888776
Q ss_pred ee
Q psy11066 53 FS 54 (70)
Q Consensus 53 ~~ 54 (70)
..
T Consensus 126 ~~ 127 (144)
T 1o73_A 126 QA 127 (144)
T ss_dssp CH
T ss_pred ch
Confidence 54
No 175
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=98.49 E-value=6.8e-07 Score=46.25 Aligned_cols=53 Identities=23% Similarity=0.290 Sum_probs=43.1
Q ss_pred chHHHHHHHhhCC---CcEEEEEeCcCc------------------------HHHHHHcCCCccCEEEEEe--CCeEEee
Q psy11066 2 SLVMLQELASEFP---DVVFLKVDVDES------------------------EDIAMAYDISSMPTFVFVK--STAKVEQ 52 (70)
Q Consensus 2 ~~p~~~~~~~~~~---~i~~~~vd~~~~------------------------~~~~~~~~i~~~Pt~~~~~--~g~~~~~ 52 (70)
+.|.+.++.++++ ++.++.|+++.. ..+++.|++.++||++++. +|+.+.+
T Consensus 46 ~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~~G~i~~~ 125 (144)
T 1i5g_A 46 FTPQLIDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTTGFDVKSIPTLVGVEADSGNIITT 125 (144)
T ss_dssp HHHHHHHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTCCSSSEEEEEETTTCCEEES
T ss_pred HHHHHHHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHHHHcCCCCCCEEEEEECCCCcEEec
Confidence 4688889988876 488888888752 5788999999999999995 8988776
Q ss_pred ee
Q psy11066 53 FS 54 (70)
Q Consensus 53 ~~ 54 (70)
..
T Consensus 126 ~~ 127 (144)
T 1i5g_A 126 QA 127 (144)
T ss_dssp CH
T ss_pred cc
Confidence 53
No 176
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.48 E-value=9.1e-07 Score=47.33 Aligned_cols=39 Identities=26% Similarity=0.352 Sum_probs=31.7
Q ss_pred cHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 26 SEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 26 ~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
+..++.++||.++||+++ +|+ .+.|. +.+.|.+.|++.+
T Consensus 133 ~~~~a~~~gv~gtPt~~i--~g~---~~~G~~~~~~l~~~i~~~l 172 (175)
T 3gyk_A 133 SMALAQKLGFNGTPSFVV--EDA---LVPGFVEQSQLQDAVDRAR 172 (175)
T ss_dssp HHHHHHHHTCCSSSEEEE--TTE---EECSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCccCCEEEE--CCE---EeeCCCCHHHHHHHHHHHH
Confidence 345678999999999986 774 56798 9999999998764
No 177
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=98.48 E-value=1.2e-06 Score=46.41 Aligned_cols=68 Identities=22% Similarity=0.280 Sum_probs=52.7
Q ss_pred chHHHHHHHhhCC-----CcEEEEEeCcCc----------------------------HHHHHHcC--------------
Q psy11066 2 SLVMLQELASEFP-----DVVFLKVDVDES----------------------------EDIAMAYD-------------- 34 (70)
Q Consensus 2 ~~p~~~~~~~~~~-----~i~~~~vd~~~~----------------------------~~~~~~~~-------------- 34 (70)
..|.+.++.++++ ++.++.|+++.. ..+++.|+
T Consensus 54 ~~~~l~~~~~~~~~~~~~~v~vv~is~d~~~d~~~~~~~~~~~~~~~~~~l~d~~~~~~~~~~~~gv~~~~~~~~~~~~~ 133 (172)
T 2k6v_A 54 TLLALKRAYEKLPPKAQERVQVIFVSVDPERDPPEVADRYAKAFHPSFLGLSGSPEAVREAAQTFGVFYQKSQYRGPGEY 133 (172)
T ss_dssp HHHHHHHHHTTSCHHHHTTEEEEEEESCTTTCCHHHHHHHHHHHCTTEEEECCCHHHHHHHHHHHTCCEEEEEEEETTEE
T ss_pred HHHHHHHHHHHhhhhccCCEEEEEEEECCCCCCHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHhcCeEEEeccCCCCCCc
Confidence 3578888888886 588999987742 24555655
Q ss_pred -CCccCEEEEEeCCeEEeeeeCC---CHHHHHHHHHhhc
Q psy11066 35 -ISSMPTFVFVKSTAKVEQFSGA---NFDKLRSTVLANR 69 (70)
Q Consensus 35 -i~~~Pt~~~~~~g~~~~~~~g~---~~~~l~~~i~~~~ 69 (70)
+.++||++++.+|+.+.++.|. +.+.|.+.|++++
T Consensus 134 ~i~~~P~~~lid~G~i~~~~~g~~~~~~~~l~~~l~~ll 172 (172)
T 2k6v_A 134 LVDHTATTFVVKEGRLVLLYSPDKAEATDRVVADLQALL 172 (172)
T ss_dssp EEEECCCEEEEETTEEEEEECHHHHTCHHHHHHHHHHCC
T ss_pred eEecCCEEEEEECCEEEEEECCCCCCCHHHHHHHHHHhC
Confidence 4689999999999999998886 6788988888753
No 178
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=98.43 E-value=7.7e-07 Score=47.45 Aligned_cols=54 Identities=19% Similarity=0.255 Sum_probs=43.7
Q ss_pred chHHHHHHHhhCC---CcEEEEEeCcCc------------------------HHHHHHcCCCccCEEEEEe-C-CeEEee
Q psy11066 2 SLVMLQELASEFP---DVVFLKVDVDES------------------------EDIAMAYDISSMPTFVFVK-S-TAKVEQ 52 (70)
Q Consensus 2 ~~p~~~~~~~~~~---~i~~~~vd~~~~------------------------~~~~~~~~i~~~Pt~~~~~-~-g~~~~~ 52 (70)
+.|.+.++.++++ ++.++.|+++.. ..+++.|++.++||++++. + |+.+.+
T Consensus 66 ~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~Pt~~lid~~~G~iv~~ 145 (165)
T 3s9f_A 66 FTPQLVEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYSVESIPTLIGLNADTGDTVTT 145 (165)
T ss_dssp HHHHHHHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTCCSSSEEEEEETTTCCEEES
T ss_pred HHHHHHHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcCCCCCCEEEEEeCCCCEEEec
Confidence 4688899988875 488888887765 6789999999999999996 4 888876
Q ss_pred eeC
Q psy11066 53 FSG 55 (70)
Q Consensus 53 ~~g 55 (70)
..+
T Consensus 146 ~~~ 148 (165)
T 3s9f_A 146 RAR 148 (165)
T ss_dssp CHH
T ss_pred ccH
Confidence 543
No 179
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=98.33 E-value=2.2e-06 Score=46.32 Aligned_cols=66 Identities=20% Similarity=0.150 Sum_probs=51.9
Q ss_pred hHHHHHHHhhCC--CcEEEEEeCcC-------------------------cHHHHHHcCCC------ccCEEEEE-eCCe
Q psy11066 3 LVMLQELASEFP--DVVFLKVDVDE-------------------------SEDIAMAYDIS------SMPTFVFV-KSTA 48 (70)
Q Consensus 3 ~p~~~~~~~~~~--~i~~~~vd~~~-------------------------~~~~~~~~~i~------~~Pt~~~~-~~g~ 48 (70)
.|.+.++.++++ ++.++.|+.+. ...+++.|++. ++|+++++ ++|+
T Consensus 51 ~~~l~~~~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~g~~~P~~~lid~~G~ 130 (187)
T 1we0_A 51 LEDVQKEYAELKKLGVEVYSVSTDTHFVHKAWHENSPAVGSIEYIMIGDPSQTISRQFDVLNEETGLADRGTFIIDPDGV 130 (187)
T ss_dssp HHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHHSCHHHHTCCSEEEECTTCHHHHHTTCEETTTTEECEEEEEECTTSB
T ss_pred HHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHHhccccCCCceEEECCchHHHHHhCCCcCCCCceeeEEEEECCCCe
Confidence 577888887774 58888887764 35678899999 99999999 7999
Q ss_pred EEeeeeCC-----CHHHHHHHHHhh
Q psy11066 49 KVEQFSGA-----NFDKLRSTVLAN 68 (70)
Q Consensus 49 ~~~~~~g~-----~~~~l~~~i~~~ 68 (70)
.+.++.|. +.+++.+.|+++
T Consensus 131 i~~~~~g~~~~~~~~~~l~~~l~~l 155 (187)
T 1we0_A 131 IQAIEINADGIGRDASTLINKVKAA 155 (187)
T ss_dssp EEEEEEECTTSCCCTTHHHHHHHHH
T ss_pred EEEEEecCCCCCCCHHHHHHHHHHH
Confidence 99998885 356777777654
No 180
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.32 E-value=3.1e-06 Score=46.07 Aligned_cols=67 Identities=19% Similarity=0.227 Sum_probs=52.4
Q ss_pred hHHHHHHHhhCC--CcEEEEEeCcC-------------------------cHHHHHHcCCC-----ccCEEEEE-eCCeE
Q psy11066 3 LVMLQELASEFP--DVVFLKVDVDE-------------------------SEDIAMAYDIS-----SMPTFVFV-KSTAK 49 (70)
Q Consensus 3 ~p~~~~~~~~~~--~i~~~~vd~~~-------------------------~~~~~~~~~i~-----~~Pt~~~~-~~g~~ 49 (70)
.|.+.++.++++ ++.++.|+.+. ...+++.|++. ++|+++++ ++|+.
T Consensus 65 ~~~l~~l~~~~~~~~v~vv~Vs~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~g~~~P~~~lid~~G~i 144 (195)
T 2bmx_A 65 IAAFSKLNDEFEDRDAQILGVSIDSEFAHFQWRAQHNDLKTLPFPMLSDIKRELSQAAGVLNADGVADRVTFIVDPNNEI 144 (195)
T ss_dssp HHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHHCTTGGGCCSCEEECTTSHHHHHHTCBCTTSSBCEEEEEECTTSBE
T ss_pred HHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhccccCCceeEEeCCchHHHHHhCCcccCCCccceEEEEcCCCeE
Confidence 467777777774 48888887763 34678899999 99999999 69999
Q ss_pred EeeeeCC-----CHHHHHHHHHhhc
Q psy11066 50 VEQFSGA-----NFDKLRSTVLANR 69 (70)
Q Consensus 50 ~~~~~g~-----~~~~l~~~i~~~~ 69 (70)
+.++.|. +.+++.+.|+++.
T Consensus 145 ~~~~~g~~~~~~~~~~l~~~l~~l~ 169 (195)
T 2bmx_A 145 QFVSATAGSVGRNVDEVLRVLDALQ 169 (195)
T ss_dssp EEEEEECTTCCCCHHHHHHHHHHHH
T ss_pred EEEEecCCCCCCCHHHHHHHHHHHh
Confidence 9998875 4678888887654
No 181
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=98.31 E-value=7.7e-06 Score=43.66 Aligned_cols=55 Identities=13% Similarity=0.236 Sum_probs=43.1
Q ss_pred CcEEEEEeCcC--cHHHHHHcCCCccCEEEEEe-C-CeEEeeeeCCCHHHHHHHHHhhc
Q psy11066 15 DVVFLKVDVDE--SEDIAMAYDISSMPTFVFVK-S-TAKVEQFSGANFDKLRSTVLANR 69 (70)
Q Consensus 15 ~i~~~~vd~~~--~~~~~~~~~i~~~Pt~~~~~-~-g~~~~~~~g~~~~~l~~~i~~~~ 69 (70)
+..++++|.+. ...+++.|++.++||++++. + |+++..+.|.+.+.+.+.|++.+
T Consensus 77 ~fv~v~~d~~~~~~~~l~~~y~v~~~P~~~fld~~~G~~l~~~~g~~~~~fl~~L~~~l 135 (153)
T 2dlx_A 77 HFIFWQVYHDSEEGQRYIQFYKLGDFPYVSILDPRTGQKLVEWHQLDVSSFLDQVTGFL 135 (153)
T ss_dssp TEEEEEEESSSHHHHHHHHHHTCCSSSEEEEECTTTCCCCEEESSCCHHHHHHHHHHHH
T ss_pred CeEEEEEecCCHhHHHHHHHcCCCCCCEEEEEeCCCCcEeeecCCCCHHHHHHHHHHHH
Confidence 47778888865 45688999999999999994 4 77887775558888888877653
No 182
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=98.29 E-value=1.7e-06 Score=47.19 Aligned_cols=67 Identities=16% Similarity=0.282 Sum_probs=51.8
Q ss_pred chHHHHHHHhhCC--CcEEEEEeCcC----------------------------cHHHHHHcCCC-----ccCEEEEE-e
Q psy11066 2 SLVMLQELASEFP--DVVFLKVDVDE----------------------------SEDIAMAYDIS-----SMPTFVFV-K 45 (70)
Q Consensus 2 ~~p~~~~~~~~~~--~i~~~~vd~~~----------------------------~~~~~~~~~i~-----~~Pt~~~~-~ 45 (70)
..|.+.++.++++ ++.++.|+.+. ...+++.|++. ++|+++++ +
T Consensus 52 ~~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~g~~~P~~~lid~ 131 (198)
T 1zof_A 52 EIIAFDKRVKDFHEKGFNVIGVSIDSEQVHFAWKNTPVEKGGIGQVSFPMVADITKSISRDYDVLFEEAIALRGAFLIDK 131 (198)
T ss_dssp HHHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCCCSSCEEECTTSHHHHHTTCEETTTEECEEEEEEET
T ss_pred HHHHHHHHHHHHHHcCCEEEEEECCCHHHHHHHHHhhhhcccccCceeEEEECCchHHHHHhCCcccCCcccceEEEECC
Confidence 3577888877764 48888887763 35688999999 99999999 6
Q ss_pred CCeEEeeeeCC-----CHHHHHHHHHhh
Q psy11066 46 STAKVEQFSGA-----NFDKLRSTVLAN 68 (70)
Q Consensus 46 ~g~~~~~~~g~-----~~~~l~~~i~~~ 68 (70)
+|+.+.++.|. +.+++.+.|++.
T Consensus 132 ~G~i~~~~~g~~~~~~~~~~l~~~l~~l 159 (198)
T 1zof_A 132 NMKVRHAVINDLPLGRNADEMLRMVDAL 159 (198)
T ss_dssp TTEEEEEEEESSSCCCHHHHHHHHHHHH
T ss_pred CCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 99999998875 356787777654
No 183
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=97.61 E-value=9.8e-08 Score=49.18 Aligned_cols=53 Identities=23% Similarity=0.379 Sum_probs=41.2
Q ss_pred chHHHHHHHhhC----CCcEEEEEeCcCc-------------------------HHHHHHcCCCccCEEEEEe-CCeEEe
Q psy11066 2 SLVMLQELASEF----PDVVFLKVDVDES-------------------------EDIAMAYDISSMPTFVFVK-STAKVE 51 (70)
Q Consensus 2 ~~p~~~~~~~~~----~~i~~~~vd~~~~-------------------------~~~~~~~~i~~~Pt~~~~~-~g~~~~ 51 (70)
+.|.+.++.+++ +++.++.|++++. ..+++.|++.++||++++. +|+.+.
T Consensus 44 ~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~ 123 (143)
T 2lus_A 44 FTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASNVTAKYGITGIPALVIVKKDGTLIS 123 (143)
Confidence 457788888877 3577777777654 3688999999999999995 898877
Q ss_pred eee
Q psy11066 52 QFS 54 (70)
Q Consensus 52 ~~~ 54 (70)
+..
T Consensus 124 ~~~ 126 (143)
T 2lus_A 124 MNG 126 (143)
Confidence 743
No 184
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=98.26 E-value=5.6e-07 Score=47.76 Aligned_cols=43 Identities=23% Similarity=0.412 Sum_probs=36.2
Q ss_pred CcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 23 VDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 23 ~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
++++..++++++|+++||+++ .||+ .+.|. +.+.|.++|++..
T Consensus 95 v~~~~~la~~~gI~gtPt~vi-~nG~---~i~G~~~~~~l~~~i~~~~ 138 (147)
T 3gv1_A 95 VAETTSLGEQFGFNGTPTLVF-PNGR---TQSGYSPMPQLEEIIRKNQ 138 (147)
T ss_dssp HHHHHHHHHHTTCCSSCEEEC-TTSC---EEESCCCTTHHHHHHHHTS
T ss_pred HHHHHHHHHHhCCCccCEEEE-ECCE---EeeCCCCHHHHHHHHHHHH
Confidence 345678899999999999998 6786 57899 9999999998764
No 185
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=98.26 E-value=3.2e-06 Score=46.54 Aligned_cols=44 Identities=18% Similarity=0.186 Sum_probs=37.7
Q ss_pred cHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 26 SEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 26 ~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
+...+.++||.++||++++.||+.+..+.|. +.+.|.+.|++.+
T Consensus 165 ~~~~a~~~gv~g~Pt~~i~~~G~~~~~~~G~~~~~~l~~~l~~~~ 209 (216)
T 2in3_A 165 GFQRVAQWGISGFPALVVESGTDRYLITTGYRPIEALRQLLDTWL 209 (216)
T ss_dssp HHHHHHHTTCCSSSEEEEEETTEEEEEESSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCcccceEEEEECCEEEEeccCCCCHHHHHHHHHHHH
Confidence 4556889999999999999999987788999 9999999887654
No 186
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=98.26 E-value=9.3e-06 Score=42.57 Aligned_cols=67 Identities=18% Similarity=0.138 Sum_probs=50.5
Q ss_pred chHHHHHHHhhCC--CcEEEEEeCcC-----------------------cHHHHHHcCCC----ccC--EEEEE-eCCeE
Q psy11066 2 SLVMLQELASEFP--DVVFLKVDVDE-----------------------SEDIAMAYDIS----SMP--TFVFV-KSTAK 49 (70)
Q Consensus 2 ~~p~~~~~~~~~~--~i~~~~vd~~~-----------------------~~~~~~~~~i~----~~P--t~~~~-~~g~~ 49 (70)
..|.+.++.+++. ++.++.|+.+. ...+++.|++. ++| +++++ ++|+.
T Consensus 55 ~~~~l~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~~~~~~p~~~~~lid~~G~i 134 (160)
T 1xvw_A 55 ELDQLRDHLPEFENDDSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPHGAVSQAYGVFNEQAGIANRGTFVVDRSGII 134 (160)
T ss_dssp HHHHHHHTGGGTSSSSEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTTTHHHHHTTCEETTTTEECSEEEEECTTSBE
T ss_pred HHHHHHHHHHHHHHCCcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcChHHHHHcCCccccCCCeeeeEEEECCCCeE
Confidence 3577888888885 48888888763 56789999999 999 66666 79999
Q ss_pred EeeeeCC-C----HHHHHHHHHhh
Q psy11066 50 VEQFSGA-N----FDKLRSTVLAN 68 (70)
Q Consensus 50 ~~~~~g~-~----~~~l~~~i~~~ 68 (70)
+.++.|. + .+++.+.|+++
T Consensus 135 ~~~~~g~~~~~~~~~~l~~~l~~l 158 (160)
T 1xvw_A 135 RFAEMKQPGEVRDQRLWTDALAAL 158 (160)
T ss_dssp EEEEECCTTCCCCHHHHHHHHHHT
T ss_pred EEEEecCCCCCCCHHHHHHHHHHh
Confidence 9999886 3 24566666554
No 187
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=98.25 E-value=3.3e-06 Score=44.95 Aligned_cols=38 Identities=16% Similarity=0.111 Sum_probs=32.3
Q ss_pred HcCCCccC------EEEEE-eCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 32 AYDISSMP------TFVFV-KSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 32 ~~~i~~~P------t~~~~-~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
.|++.++| +++++ ++|+.+.++.|. +.+.|.+.|++++
T Consensus 122 ~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 167 (171)
T 3cmi_A 122 KSGMLGLRGIKWNFEKFLVDKKGKVYERYSSLTKPSSLSETIEELL 167 (171)
T ss_dssp SCCSSSCCSCCSTTCEEEECSSSCEEEEECTTSCGGGGHHHHHHHH
T ss_pred cCCcCCCCcccccceEEEECCCCCEEEEeCCCCCHHHHHHHHHHHH
Confidence 47889999 76666 899999999998 8889999888765
No 188
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=98.24 E-value=9.5e-06 Score=37.53 Aligned_cols=47 Identities=13% Similarity=0.246 Sum_probs=36.8
Q ss_pred CcEEEEEeCcCcHHHHH---HcCCCccCEEEEEeCCeEEeeeeCCCHHHHHHHHH
Q psy11066 15 DVVFLKVDVDESEDIAM---AYDISSMPTFVFVKSTAKVEQFSGANFDKLRSTVL 66 (70)
Q Consensus 15 ~i~~~~vd~~~~~~~~~---~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~l~~~i~ 66 (70)
++.+..+|+++++++.+ .+++.++|++++ +|+. +.|.+.+.|.++|+
T Consensus 25 ~i~~~~~di~~~~~~~~~~~~~~~~~vP~l~~--~g~~---~~g~~~~~l~~~l~ 74 (75)
T 1r7h_A 25 GLAYNTVDISLDDEARDYVMALGYVQAPVVEV--DGEH---WSGFRPERIKQLQA 74 (75)
T ss_dssp TCCCEEEETTTCHHHHHHHHHTTCBCCCEEEE--TTEE---EESCCHHHHHHHHC
T ss_pred CCCcEEEECCCCHHHHHHHHHcCCCccCEEEE--CCeE---EcCCCHHHHHHHHh
Confidence 47788889988776665 899999999983 7753 56778888888774
No 189
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=98.20 E-value=9.5e-06 Score=43.99 Aligned_cols=67 Identities=13% Similarity=0.225 Sum_probs=49.6
Q ss_pred hHHHHHHHhhCCC--cEEEEEeCcC--------cH---HHH-H-----------------------------HcCCCccC
Q psy11066 3 LVMLQELASEFPD--VVFLKVDVDE--------SE---DIA-M-----------------------------AYDISSMP 39 (70)
Q Consensus 3 ~p~~~~~~~~~~~--i~~~~vd~~~--------~~---~~~-~-----------------------------~~~i~~~P 39 (70)
.|.+.++.+++++ +.++.|+++. .. ..+ + .|++.++|
T Consensus 67 ~~~l~~l~~~~~~~~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~D~~~~~~~~~~~~l~~~~~~v~~~P 146 (190)
T 2vup_A 67 YETATTLYNKYKSQGFTVLAFPCNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGENAHPLYEYMKKTKPGILKTK 146 (190)
T ss_dssp HHHHHHHHHHHGGGTCEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCBSSSTTBCHHHHHHHHHSCCGGGCC
T ss_pred HHHHHHHHHHHhcCCeEEEEEEcCccCCCCCCCHHHHHHHHHHhcCCCeEEEeecccCcccccHHHHHHHhhcCCcCCCc
Confidence 5778888888753 8888888762 11 122 1 24788899
Q ss_pred ------EEEEE-eCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 40 ------TFVFV-KSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 40 ------t~~~~-~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
+++++ ++|+.+.++.|. +.+.+.+.|++.+
T Consensus 147 ~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 184 (190)
T 2vup_A 147 AIKWNFTSFLIDRDGVPVERFSPGASVKDIEKKLIPLL 184 (190)
T ss_dssp SCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHH
T ss_pred cccccceEEEECCCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 66666 899999999998 8999998888764
No 190
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=98.18 E-value=3.1e-06 Score=39.95 Aligned_cols=50 Identities=20% Similarity=0.257 Sum_probs=36.9
Q ss_pred CcEEEEEeCcCcHHHHH---HcCCCccCEEEEEeCCeEEeeeeCCCHHHHHHHHHhhc
Q psy11066 15 DVVFLKVDVDESEDIAM---AYDISSMPTFVFVKSTAKVEQFSGANFDKLRSTVLANR 69 (70)
Q Consensus 15 ~i~~~~vd~~~~~~~~~---~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~l~~~i~~~~ 69 (70)
++.+..+|+++++++.+ ++++.++||++ .+|+. +.|.+.+.|.++|+++.
T Consensus 25 ~i~~~~vdi~~~~~~~~~~~~~g~~~vP~~~--~~g~~---~~g~~~~~l~~~l~~~~ 77 (81)
T 1h75_A 25 GFDFEMINVDRVPEAAEALRAQGFRQLPVVI--AGDLS---WSGFRPDMINRLHPAPH 77 (81)
T ss_dssp TCCCEEEETTTCHHHHHHHHHTTCCSSCEEE--ETTEE---EESCCHHHHGGGSCCC-
T ss_pred CCCeEEEECCCCHHHHHHHHHhCCCccCEEE--ECCEE---EecCCHHHHHHHHhccc
Confidence 47788899988766554 58999999983 47864 45678888888876654
No 191
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=98.17 E-value=3.3e-05 Score=39.86 Aligned_cols=62 Identities=18% Similarity=0.298 Sum_probs=50.2
Q ss_pred hHHHHHHHhhCCCcEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCe-EEeeeeC----C-CHHHHHHHHHhh
Q psy11066 3 LVMLQELASEFPDVVFLKVDVDESEDIAMAYDISSMPTFVFVKSTA-KVEQFSG----A-NFDKLRSTVLAN 68 (70)
Q Consensus 3 ~p~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~-~~~~~~g----~-~~~~l~~~i~~~ 68 (70)
.+.|.++++.+.++.|+..+- +++++.|++. .|++++|+++. ....+.| . +.+.|.+||...
T Consensus 55 ~~~F~~~A~~~~d~~F~~t~~---~~v~~~~~v~-~~~vvlfkkfde~~~~~~g~~~~~~~~~~L~~FI~~n 122 (124)
T 2l4c_A 55 VPILHSMVQKFPGVSFGISTD---SEVLTHYNIT-GNTICLFRLVDNEQLNLEDEDIESIDATKLSRFIEIN 122 (124)
T ss_dssp HHHHHHHHHHCTTSEEEEECC---HHHHHHTTCC-SSCEEEEETTTTEEEEECHHHHTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCceEEEECh---HHHHHHcCCC-CCeEEEEEcCCCCceeecCcccCCCCHHHHHHHHHHh
Confidence 467888999996699987753 6789999998 89999999864 4556776 5 999999999865
No 192
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=98.12 E-value=3.5e-05 Score=42.97 Aligned_cols=64 Identities=17% Similarity=0.326 Sum_probs=49.9
Q ss_pred chHHHHHHHhhCCCcEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCe-EEeeee----CC-CHHHHHHHHHhhc
Q psy11066 2 SLVMLQELASEFPDVVFLKVDVDESEDIAMAYDISSMPTFVFVKSTA-KVEQFS----GA-NFDKLRSTVLANR 69 (70)
Q Consensus 2 ~~p~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~-~~~~~~----g~-~~~~l~~~i~~~~ 69 (70)
+.|.|.++++.+.++.|+.. ...+++++|++.+ |++++|+++. ....+. |. +.+.|.+||....
T Consensus 42 ~~~~f~~~A~~l~~~~F~~t---~~~~v~~~~~v~~-p~i~lfk~~~~~~~~~~~~~~g~~~~~~l~~fi~~~~ 111 (227)
T 4f9z_D 42 AVPILHSMVQKFPGVSFGIS---TDSEVLTHYNITG-NTICLFRLVDNEQLNLEDEDIESIDATKLSRFIEINS 111 (227)
T ss_dssp HHHHHHHHTTTCTTSEEEEE---CCHHHHHHTTCCS-SEEEEEETTTTEEEEECHHHHHTCCHHHHHHHHHHHC
T ss_pred hHHHHHHHHHhCCCceEEEE---CCHHHHHHcCCCC-CeEEEEEecCcccccccccccCCCCHHHHHHHHHHhC
Confidence 45789999999966888764 3678899999998 9999998743 334555 35 8999999998653
No 193
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=98.11 E-value=1.3e-05 Score=43.90 Aligned_cols=66 Identities=14% Similarity=0.157 Sum_probs=50.6
Q ss_pred hHHHHHHHhhC--CCcEEEEEeCcC----------------------------cHHHHHHcCCC------ccCEEEEE-e
Q psy11066 3 LVMLQELASEF--PDVVFLKVDVDE----------------------------SEDIAMAYDIS------SMPTFVFV-K 45 (70)
Q Consensus 3 ~p~~~~~~~~~--~~i~~~~vd~~~----------------------------~~~~~~~~~i~------~~Pt~~~~-~ 45 (70)
.|.|.++.+++ .++.++.|+.|. ...+++.|++. ++|+++++ +
T Consensus 56 ~~~l~~l~~~~~~~~v~vi~Is~D~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~ygv~~~~~g~~~P~~~lid~ 135 (202)
T 1uul_A 56 ICQFSDRVKEFSDIGCEVLACSMDSEYSHLAWTSIERKRGGLGQMNIPILADKTKCIMKSYGVLKEEDGVAYRGLFIIDP 135 (202)
T ss_dssp HHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEECTTCHHHHHHTCEETTTTEECEEEEEECT
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCCCCCceeEEECCchHHHHHcCCccCCCCceeeEEEEECC
Confidence 46777787777 348888887763 34678899999 99999999 7
Q ss_pred CCeEEeeeeCC-C----HHHHHHHHHhh
Q psy11066 46 STAKVEQFSGA-N----FDKLRSTVLAN 68 (70)
Q Consensus 46 ~g~~~~~~~g~-~----~~~l~~~i~~~ 68 (70)
+|+.+.++.|. + .+++.+.|+++
T Consensus 136 ~G~i~~~~~g~~~~~~~~~ell~~l~~l 163 (202)
T 1uul_A 136 KQNLRQITVNDLPVGRDVDEALRLVKAF 163 (202)
T ss_dssp TSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred CCEEEEEEeCCCCCCCCHHHHHHHHHHh
Confidence 89999888775 3 47777777654
No 194
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=98.08 E-value=2.9e-05 Score=42.08 Aligned_cols=66 Identities=24% Similarity=0.394 Sum_probs=49.7
Q ss_pred hHHHHHHHhhC--CCcEEEEEeCcC----------------------------cHHHHHHcCCC-----ccCEEEEE-eC
Q psy11066 3 LVMLQELASEF--PDVVFLKVDVDE----------------------------SEDIAMAYDIS-----SMPTFVFV-KS 46 (70)
Q Consensus 3 ~p~~~~~~~~~--~~i~~~~vd~~~----------------------------~~~~~~~~~i~-----~~Pt~~~~-~~ 46 (70)
.|.|.++.+++ .++.++.|+.+. ...+++.|++. .+|+++++ ++
T Consensus 51 ~~~l~~~~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~g~~~P~~~liD~~ 130 (192)
T 2h01_A 51 IIALDKALDSFKERNVELLGCSVDSKFTHLAWKKTPLSQGGIGNIKHTLISDISKSIARSYDVLFNESVALRAFVLIDKQ 130 (192)
T ss_dssp HHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHHHTTCEETTTEECCEEEEECTT
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhHHhhCCccCCCcCeEECCcHHHHHHhCCcCcCCceeeEEEEEcCC
Confidence 46777777777 357787777653 34688999999 99999999 79
Q ss_pred CeEEeeeeCC-C----HHHHHHHHHhh
Q psy11066 47 TAKVEQFSGA-N----FDKLRSTVLAN 68 (70)
Q Consensus 47 g~~~~~~~g~-~----~~~l~~~i~~~ 68 (70)
|+.+.+..|. + .+++.+.|+++
T Consensus 131 G~i~~~~~g~~~~~~~~~~l~~~l~~l 157 (192)
T 2h01_A 131 GVVQHLLVNNLALGRSVDEILRLIDAL 157 (192)
T ss_dssp SBEEEEEEGGGSSGGGHHHHHHHHHHH
T ss_pred CEEEEEEeCCCCCCCCHHHHHHHHHHH
Confidence 9999988884 3 56677666654
No 195
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=98.06 E-value=1.4e-05 Score=42.10 Aligned_cols=68 Identities=13% Similarity=0.238 Sum_probs=49.8
Q ss_pred chHHHHHHHhhCCC--cEEEEEeCcC--------c---HHHHH-Hc-----------------------------CC--C
Q psy11066 2 SLVMLQELASEFPD--VVFLKVDVDE--------S---EDIAM-AY-----------------------------DI--S 36 (70)
Q Consensus 2 ~~p~~~~~~~~~~~--i~~~~vd~~~--------~---~~~~~-~~-----------------------------~i--~ 36 (70)
..|.+.++.+++++ +.++.|+++. . .+.++ ++ ++ .
T Consensus 50 ~~~~l~~l~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~~~ 129 (170)
T 2p5q_A 50 NYAEMNQLYEKYKDQGLEILAFPCNQFGEEEPGTNDQITDFVCTRFKSEFPIFDKIDVNGENASPLYRFLKLGKWGIFGD 129 (170)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEECCTTTTCCCSCHHHHHHHHHHHTCCCSCBBCCCBSSSTTBCHHHHHHHTHHHHTTCS
T ss_pred HHHHHHHHHHHhccCCEEEEEEECCCCCCCCCCCHHHHHHHHHHhcCCCceeEeeeccCCCchHHHHHHHHhcCCCccCC
Confidence 35778888888753 8888888752 1 22233 32 44 6
Q ss_pred ccC---EEEEE-eCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 37 SMP---TFVFV-KSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 37 ~~P---t~~~~-~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
++| +++++ ++|+.+.++.|. +.+.+.+.|++++
T Consensus 130 ~~p~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 167 (170)
T 2p5q_A 130 DIQWNFAKFLVNKDGQVVDRYYPTTSPLSLERDIKQLL 167 (170)
T ss_dssp CCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHT
T ss_pred cccccccEEEECCCCCEEEeeCCCCCHHHHHHHHHHHh
Confidence 788 76666 899999999999 8899999998875
No 196
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=98.06 E-value=2.7e-05 Score=43.37 Aligned_cols=66 Identities=17% Similarity=0.255 Sum_probs=50.2
Q ss_pred hHHHHHHHhhC--CCcEEEEEeCcC----------------------------cHHHHHHcCCC------ccCEEEEE-e
Q psy11066 3 LVMLQELASEF--PDVVFLKVDVDE----------------------------SEDIAMAYDIS------SMPTFVFV-K 45 (70)
Q Consensus 3 ~p~~~~~~~~~--~~i~~~~vd~~~----------------------------~~~~~~~~~i~------~~Pt~~~~-~ 45 (70)
.|.|.++.+++ .++.++.|+++. ...+++.|++. ++|+++++ +
T Consensus 76 ~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~i~~~ygv~~~~~g~~~P~~~liD~ 155 (220)
T 1zye_A 76 IIAFSDKASEFHDVNCEVVAVSVDSHFSHLAWINTPRKNGGLGHMNIALLSDLTKQISRDYGVLLEGPGLALRGLFIIDP 155 (220)
T ss_dssp HHHHHHHHHHHHHTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSEEEECTTSHHHHHTTCEETTTTEECEEEEEECT
T ss_pred HHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHhCCCcCCceEEEECCcHHHHHHhCCeecCCCcccceEEEECC
Confidence 46777777777 358888777653 34688999999 99999999 7
Q ss_pred CCeEEeeeeCC-----CHHHHHHHHHhh
Q psy11066 46 STAKVEQFSGA-----NFDKLRSTVLAN 68 (70)
Q Consensus 46 ~g~~~~~~~g~-----~~~~l~~~i~~~ 68 (70)
+|+.+.+..|. +.+++.+.|+++
T Consensus 156 ~G~I~~~~~g~~~~~~~~~ell~~l~~l 183 (220)
T 1zye_A 156 NGVIKHLSVNDLPVGRSVEETLRLVKAF 183 (220)
T ss_dssp TSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred CCEEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 99999888775 346777777654
No 197
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=98.02 E-value=7.7e-05 Score=39.36 Aligned_cols=67 Identities=15% Similarity=0.104 Sum_probs=49.9
Q ss_pred hHHHHHHHhhCCCcEEEEEeCcC-----------------------cHHHHHHcCCCc------cCEEEEE-eCCeEEee
Q psy11066 3 LVMLQELASEFPDVVFLKVDVDE-----------------------SEDIAMAYDISS------MPTFVFV-KSTAKVEQ 52 (70)
Q Consensus 3 ~p~~~~~~~~~~~i~~~~vd~~~-----------------------~~~~~~~~~i~~------~Pt~~~~-~~g~~~~~ 52 (70)
.|.+.++.+++.++.++.|+.|. ..++++.|++.. .|+++++ ++|+.+.+
T Consensus 64 ~~~l~~l~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~v~~~~~g~~~p~~~lid~~G~i~~~ 143 (167)
T 2jsy_A 64 TRRFNEEAAKLGDVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFGEAFGVYIKELRLLARSVFVLDENGKVVYA 143 (167)
T ss_dssp HHHHHHHHHHHSSCEEEEEECSSGGGTSCCGGGSSCTTEEEEEGGGTCHHHHHTTCBBTTTCSBCCEEEEECTTSCEEEE
T ss_pred HHHHHHHHHHcCCCEEEEEECCCHHHHHHHHHhcCCCCceEeeCCchhHHHHHhCCccccCCceeeEEEEEcCCCcEEEE
Confidence 46788888877558888777652 346778899987 4998888 69999999
Q ss_pred eeCC------CHHHHHHHHHhhc
Q psy11066 53 FSGA------NFDKLRSTVLANR 69 (70)
Q Consensus 53 ~~g~------~~~~l~~~i~~~~ 69 (70)
+.|. +.+++.+.|++++
T Consensus 144 ~~g~~~~~~~~~~~l~~~l~~ll 166 (167)
T 2jsy_A 144 EYVSEATNHPNYEKPIEAAKALV 166 (167)
T ss_dssp EECSBTTSCCCSHHHHHHHHHHH
T ss_pred EecCCcCCCCCHHHHHHHHHHhh
Confidence 8763 2367888887764
No 198
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=98.01 E-value=4.5e-05 Score=40.84 Aligned_cols=64 Identities=13% Similarity=0.100 Sum_probs=46.3
Q ss_pred hHHHHHHHhhCCCcEEEEEeCcC----------------------cHHHHHHcCCCcc---------CEEEEE-eCCeEE
Q psy11066 3 LVMLQELASEFPDVVFLKVDVDE----------------------SEDIAMAYDISSM---------PTFVFV-KSTAKV 50 (70)
Q Consensus 3 ~p~~~~~~~~~~~i~~~~vd~~~----------------------~~~~~~~~~i~~~---------Pt~~~~-~~g~~~ 50 (70)
.|.|.++.++ .++.++.|+.|. ...+++.|++... |+++++ ++|+.+
T Consensus 64 ~~~l~~l~~~-~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv~~~~~~~~g~~~p~~~lid~~G~I~ 142 (175)
T 1xvq_A 64 VRTFDERAAA-SGATVLCVSKDLPFAQKRFCGAEGTENVMPASAFRDSFGEDYGVTIADGPMAGLLARAIVVIGADGNVA 142 (175)
T ss_dssp HHHHHHHHHH-TTCEEEEEESSCHHHHTTCC------CEEEEECTTSSHHHHTTCBBCSSTTTTSBCSEEEEECTTSBEE
T ss_pred HHHHHHHHhh-cCCEEEEEECCCHHHHHHHHHHcCCCCceEeeCCHHHHHHHhCCcccccccCCcccceEEEECCCCeEE
Confidence 4677888777 668888887762 2457889999887 887777 699999
Q ss_pred eeeeC--C-CHHHHHHHHHh
Q psy11066 51 EQFSG--A-NFDKLRSTVLA 67 (70)
Q Consensus 51 ~~~~g--~-~~~~l~~~i~~ 67 (70)
..+.| . ....+.++|+.
T Consensus 143 ~~~~g~~~~~~~~~~~~l~~ 162 (175)
T 1xvq_A 143 YTELVPEIAQEPNYEAALAA 162 (175)
T ss_dssp EEEECSBTTCCCCHHHHHHH
T ss_pred EEEECCCcCCCCCHHHHHHH
Confidence 98874 3 44456555544
No 199
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=97.99 E-value=5.1e-05 Score=42.05 Aligned_cols=66 Identities=20% Similarity=0.351 Sum_probs=48.9
Q ss_pred hHHHHHHHhhC--CCcEEEEEeCcC----------------------------cHHHHHHcCCC-----ccCEEEEE-eC
Q psy11066 3 LVMLQELASEF--PDVVFLKVDVDE----------------------------SEDIAMAYDIS-----SMPTFVFV-KS 46 (70)
Q Consensus 3 ~p~~~~~~~~~--~~i~~~~vd~~~----------------------------~~~~~~~~~i~-----~~Pt~~~~-~~ 46 (70)
.|.|.++.+++ .++.++.|+.|. ..++++.|++. .+|+++++ ++
T Consensus 72 ~~~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~g~~~~~fp~l~D~~~~~~~~ygv~~~~g~~~p~~~lID~~ 151 (213)
T 2i81_A 72 IIALDKALDAFHERNVELLGCSVDSKYTHLAWKKTPLAKGGIGNIKHTLLSDITKSISKDYNVLFDDSVSLRAFVLIDMN 151 (213)
T ss_dssp HHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHSSCGGGTCCCSCSSEEEECTTSHHHHHTTCEETTTEECEEEEEECTT
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCccCCCceEEECCchHHHHHhCCccccCCcccEEEEECCC
Confidence 46677777776 347777776543 34688999999 89998888 68
Q ss_pred CeEEeeeeCC-C----HHHHHHHHHhh
Q psy11066 47 TAKVEQFSGA-N----FDKLRSTVLAN 68 (70)
Q Consensus 47 g~~~~~~~g~-~----~~~l~~~i~~~ 68 (70)
|+.+.+..|. + .+++.+.|++.
T Consensus 152 G~i~~~~~~~~~~~~~~~ell~~l~~l 178 (213)
T 2i81_A 152 GIVQHLLVNNLAIGRSVDEILRIIDAI 178 (213)
T ss_dssp SBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred CEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 9999888774 3 67787777654
No 200
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=97.98 E-value=4.1e-05 Score=40.25 Aligned_cols=35 Identities=11% Similarity=0.095 Sum_probs=28.6
Q ss_pred CCccCEEEEE-eCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 35 ISSMPTFVFV-KSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 35 i~~~Pt~~~~-~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
+..+|+++++ ++|+.+.++.|. +.+.+.+.|++++
T Consensus 130 i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 166 (169)
T 2v1m_A 130 IKWNFSKFLVDRQGQPVKRYSPTTAPYDIEGDIMELL 166 (169)
T ss_dssp CCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHH
T ss_pred ccccceEEEECCCCCEEEEcCCCCCHHHHHHHHHHHh
Confidence 3445887777 799999999998 8888988888765
No 201
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=97.96 E-value=8.2e-06 Score=40.28 Aligned_cols=62 Identities=10% Similarity=0.087 Sum_probs=39.4
Q ss_pred chHHHHHHHhhCCCcEEEEEeCcCc-------HHHHHHcCCCccCEEEEEeCCeEEeeeeC---C-CHHHHHHHHHh
Q psy11066 2 SLVMLQELASEFPDVVFLKVDVDES-------EDIAMAYDISSMPTFVFVKSTAKVEQFSG---A-NFDKLRSTVLA 67 (70)
Q Consensus 2 ~~p~~~~~~~~~~~i~~~~vd~~~~-------~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g---~-~~~~l~~~i~~ 67 (70)
+.|.|++....+++ +..+|++.. ..+.+.+++.++|++ |.+|+.+..+.. . ..+.|.++|..
T Consensus 28 ~~~~L~~~~~~~~~--~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~i--~~~g~~i~g~~~~~~~~~~g~L~~~l~~ 100 (105)
T 1kte_A 28 TQELLSQLPFKEGL--LEFVDITATSDTNEIQDYLQQLTGARTVPRV--FIGKECIGGCTDLESMHKRGELLTRLQQ 100 (105)
T ss_dssp HHHHHHHSCBCTTS--EEEEEGGGSTTHHHHHHHHHHHHSCCCSCEE--EETTEEEESHHHHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHcCCCCCc--cEEEEccCCCCHHHHHHHHHHHhCCCCcCeE--EECCEEEeccHHHHHHHHCCcHHHHHHH
Confidence 34566665555544 555666554 357888999999997 458876654322 2 35677777764
No 202
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=97.94 E-value=5e-05 Score=41.31 Aligned_cols=66 Identities=15% Similarity=0.204 Sum_probs=49.7
Q ss_pred hHHHHHHHhhCC--CcEEEEEeCcC----------------------------cHHHHHHcCCC------ccCEEEEE-e
Q psy11066 3 LVMLQELASEFP--DVVFLKVDVDE----------------------------SEDIAMAYDIS------SMPTFVFV-K 45 (70)
Q Consensus 3 ~p~~~~~~~~~~--~i~~~~vd~~~----------------------------~~~~~~~~~i~------~~Pt~~~~-~ 45 (70)
.|.|.++.+++. ++.++.|+++. ..++++.|++. ++|+++++ +
T Consensus 54 ~~~l~~l~~~~~~~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~~~~~p~l~D~~~~~~~~~gv~~~~~~~~~P~~~lid~ 133 (197)
T 1qmv_A 54 IIAFSNRAEDFRKLGCEVLGVSVDSQFTHLAWINTPRKEGGLGPLNIPLLADVTRRLSEDYGVLKTDEGIAYRGLFIIDG 133 (197)
T ss_dssp HHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHTSCGGGTCCCSCSSCEEECTTCHHHHHTTCEETTTTEECEEEEEECT
T ss_pred HHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhCCCCCCceEEEECCcHHHHHHcCCccCCCCceeeEEEEECC
Confidence 467777777773 48888887763 24678999999 89998888 7
Q ss_pred CCeEEeeeeCC-C----HHHHHHHHHhh
Q psy11066 46 STAKVEQFSGA-N----FDKLRSTVLAN 68 (70)
Q Consensus 46 ~g~~~~~~~g~-~----~~~l~~~i~~~ 68 (70)
+|+.+.++.|. + .+++.+.|++.
T Consensus 134 ~G~i~~~~~g~~~~~~~~~e~l~~l~~l 161 (197)
T 1qmv_A 134 KGVLRQITVNDLPVGRSVDEALRLVQAF 161 (197)
T ss_dssp TSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred CCcEEEEEeCCCCCCCCHHHHHHHHHhc
Confidence 89999988875 3 46777777654
No 203
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=97.92 E-value=1.3e-05 Score=45.36 Aligned_cols=44 Identities=11% Similarity=0.178 Sum_probs=34.8
Q ss_pred CcHHHHHHcCCCccCEEEEEe-CCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 25 ESEDIAMAYDISSMPTFVFVK-STAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 25 ~~~~~~~~~~i~~~Pt~~~~~-~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
++..++++++|+++||+++.. +|+. ..+.|+ +.+.|.++|++.+
T Consensus 187 ~~~~l~~~~gv~gtPt~vi~~~~G~~-~~~~G~~~~~~L~~~l~~~~ 232 (241)
T 1v58_A 187 DNEKLMDDLGANVTPAIYYMSKENTL-QQAVGLPDQKTLNIIMGNKL 232 (241)
T ss_dssp HHHHHHHHHTCCSSCEEEEEETTTEE-EEEESSCCHHHHHHHTTC--
T ss_pred HHHHHHHHcCCCCCCEEEEECCCCCE-EEecCCCCHHHHHHHHHHHH
Confidence 345678999999999999986 5754 678899 9999999987654
No 204
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=97.91 E-value=0.00011 Score=39.70 Aligned_cols=36 Identities=14% Similarity=0.284 Sum_probs=30.3
Q ss_pred CCCccC---EEEEE-eCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 34 DISSMP---TFVFV-KSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 34 ~i~~~P---t~~~~-~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
++.++| +++++ ++|+.+.++.|. +.+.|.+.|++++
T Consensus 142 ~~~~iP~~~~~~liD~~G~i~~~~~g~~~~~~l~~~i~~lL 182 (187)
T 3dwv_A 142 ATKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEEKLIPLL 182 (187)
T ss_dssp SSSSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHC
T ss_pred CCCccccceeEEEECCCCCEEEEECCCCCHHHHHHHHHHHH
Confidence 445677 87777 899999999999 9999999998875
No 205
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=97.90 E-value=7.2e-06 Score=45.49 Aligned_cols=41 Identities=10% Similarity=0.236 Sum_probs=34.4
Q ss_pred CcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 25 ESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 25 ~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
++..++++++|+++||+++ .||+ .+.|. +.+.|.++|++..
T Consensus 169 ~~~~l~~~~gV~gTPt~vi-~nG~---~~~G~~~~~~l~~~l~~~~ 210 (211)
T 1t3b_A 169 KHYELGIQFGVRGTPSIVT-STGE---LIGGYLKPADLLRALEETA 210 (211)
T ss_dssp HHHHHHHHHTCCSSCEEEC-TTSC---CCCSCCCHHHHHHHHHHCC
T ss_pred HHHHHHHHcCCCcCCEEEE-eCCE---EecCCCCHHHHHHHHHhcc
Confidence 4567889999999999988 6886 67898 9999999998653
No 206
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=97.90 E-value=3e-06 Score=42.84 Aligned_cols=48 Identities=17% Similarity=0.244 Sum_probs=34.0
Q ss_pred EEEEeCcCcH-------HHHHHcCCCccCEEEEEeCCeEEeeeeC---C-CHHHHHHHHHh
Q psy11066 18 FLKVDVDESE-------DIAMAYDISSMPTFVFVKSTAKVEQFSG---A-NFDKLRSTVLA 67 (70)
Q Consensus 18 ~~~vd~~~~~-------~~~~~~~i~~~Pt~~~~~~g~~~~~~~g---~-~~~~l~~~i~~ 67 (70)
+..+|+++++ .+.+.+++.++|+++ .+|+.+..+.+ . +.+.|.++|+.
T Consensus 49 ~~~vdi~~~~~~~~~~~~l~~~~g~~~vP~v~--i~g~~igg~~~~~~~~~~~~L~~~L~~ 107 (114)
T 2hze_A 49 YEIVDIKEFKPENELRDYFEQITGGKTVPRIF--FGKTSIGGYSDLLEIDNMDALGDILSS 107 (114)
T ss_dssp EEEEEGGGSSSHHHHHHHHHHHHSCCSSCEEE--ETTEEEESHHHHHHHHHTTCHHHHHHH
T ss_pred eEEEEccCCCChHHHHHHHHHHhCCCCcCEEE--ECCEEEeCcHHHHHHHHCChHHHHHHH
Confidence 7888887763 688899999999874 38877654432 2 34567777764
No 207
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=97.89 E-value=3.9e-05 Score=42.23 Aligned_cols=43 Identities=12% Similarity=0.067 Sum_probs=36.3
Q ss_pred HHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 27 EDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 27 ~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
...+.++||.++||+++..+|+.+....|+ +.+.+.+.|++.+
T Consensus 159 ~~~a~~~gv~g~Pt~~v~~~~~~~~~~~g~~~~e~~~~~i~~~~ 202 (208)
T 3kzq_A 159 LSLAKSLGVNSYPSLVLQINDAYFPIEVDYLSTEPTLKLIRERI 202 (208)
T ss_dssp HHHHHHTTCCSSSEEEEEETTEEEEECCCSSCSHHHHHHHHHHH
T ss_pred HHHHHHcCCCcccEEEEEECCEEEEeeCCCCCHHHHHHHHHHHH
Confidence 345778999999999999899988888899 8888888887654
No 208
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=97.87 E-value=2.6e-05 Score=41.62 Aligned_cols=41 Identities=15% Similarity=0.091 Sum_probs=32.9
Q ss_pred HHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 27 EDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 27 ~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
...++++||+++||+++ ||+.+....|. +.+++.+.|+.++
T Consensus 140 ~~~a~~~gv~gTPtfiI--NGky~v~~~~~~s~e~~~~~i~~Ll 181 (184)
T 4dvc_A 140 DKQFQDSGLTGVPAVVV--NNRYLVQGQSAKSLDEYFDLVNYLL 181 (184)
T ss_dssp HHHHHHHTCCSSSEEEE--TTTEEECGGGCSSHHHHHHHHHHHT
T ss_pred HHHHHHcCCCcCCEEEE--CCEEeeCCcCCCCHHHHHHHHHHHH
Confidence 45688999999999885 88866666677 8888988888765
No 209
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=97.84 E-value=1.2e-05 Score=44.59 Aligned_cols=41 Identities=7% Similarity=0.186 Sum_probs=33.3
Q ss_pred cCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhh
Q psy11066 24 DESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLAN 68 (70)
Q Consensus 24 ~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~ 68 (70)
+++..++++++|+++||+ ++.+|+ .+.|. +.+.|.++|++.
T Consensus 168 ~~~~~l~~~~gV~gtPt~-v~~dG~---~~~G~~~~~~l~~~l~~~ 209 (216)
T 1eej_A 168 ADHYALGVQLGVSGTPAV-VLSNGT---LVPGYQPPKEMKEFLDEH 209 (216)
T ss_dssp HHHHHHHHHHTCCSSSEE-ECTTSC---EEESCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCccCEE-EEcCCe---EecCCCCHHHHHHHHHHh
Confidence 455678999999999998 566784 56798 899999998765
No 210
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=97.83 E-value=2.7e-05 Score=41.88 Aligned_cols=69 Identities=16% Similarity=0.170 Sum_probs=49.7
Q ss_pred chHHHHHHHhhCCC--cEEEEEeCcC--------c---HHHHHH------------------------cCCCccC-----
Q psy11066 2 SLVMLQELASEFPD--VVFLKVDVDE--------S---EDIAMA------------------------YDISSMP----- 39 (70)
Q Consensus 2 ~~p~~~~~~~~~~~--i~~~~vd~~~--------~---~~~~~~------------------------~~i~~~P----- 39 (70)
..|.|.++.+++++ +.++.|+++. . .+.+++ |.+.++|
T Consensus 67 ~~p~l~~l~~~~~~~~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~g~~~~~~~~~~~~~~P~~~~~ 146 (181)
T 2p31_A 67 HYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDSNKEIESFARRTYSVSFPMFSKIAVTGTGAHPAFKYLAQTSGKEPTW 146 (181)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSSTTSCHHHHHHHHHHSCCCCS
T ss_pred HHHHHHHHHHHhhcCCEEEEEEECcCCCCCCCCCHHHHHHHHHhhcCCCceeEeecccCCccchhhhhhhhhcCCCcccc
Confidence 35788888888753 8888888752 1 112222 2355788
Q ss_pred --EEEEE-eCCeEEeeeeCC-CHHHHHHHHHhhcC
Q psy11066 40 --TFVFV-KSTAKVEQFSGA-NFDKLRSTVLANRS 70 (70)
Q Consensus 40 --t~~~~-~~g~~~~~~~g~-~~~~l~~~i~~~~~ 70 (70)
+.+++ ++|+.+.++.|. +.++|.+.|++++.
T Consensus 147 ~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 181 (181)
T 2p31_A 147 NFWKYLVAPDGKVVGAWDPTVSVEEVRPQITALVR 181 (181)
T ss_dssp TTCEEEECTTSCEEEEECTTSCHHHHHHHHHTTCC
T ss_pred ceeEEEEcCCCCEEEEeCCCCCHHHHHHHHHHHhC
Confidence 55555 899999999999 99999999988763
No 211
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=97.79 E-value=0.00013 Score=40.83 Aligned_cols=53 Identities=6% Similarity=0.043 Sum_probs=39.4
Q ss_pred CcEEEEEeCcCcHHHHHHcCCCccCEEEEEe-CCeEEeeeeCC-CHHHHHHHHHhh
Q psy11066 15 DVVFLKVDVDESEDIAMAYDISSMPTFVFVK-STAKVEQFSGA-NFDKLRSTVLAN 68 (70)
Q Consensus 15 ~i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~-~g~~~~~~~g~-~~~~l~~~i~~~ 68 (70)
++.+..++ +.+.+++++|+|+++||+++|. +|+......+. +...+..+|++.
T Consensus 184 ~i~v~~~~-~~~~~l~~~f~v~~~Pslvl~~~~g~~~~~~~~~~~r~~~~~~l~~~ 238 (244)
T 3q6o_A 184 GVAVRRVL-NTEANVVRKFGVTDFPSCYLLFRNGSVSRVPVLMESRSFYTAYLQRL 238 (244)
T ss_dssp TEEEEEEE-TTCHHHHHHHTCCCSSEEEEEETTSCEEECCCSSSSHHHHHHHHHTC
T ss_pred ceEEEEEe-CchHHHHHHcCCCCCCeEEEEeCCCCeEeeccccccHHHHHHHHHhC
Confidence 46665555 4458999999999999998885 67666666666 777777777664
No 212
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=97.74 E-value=8.8e-05 Score=39.82 Aligned_cols=34 Identities=9% Similarity=-0.045 Sum_probs=28.2
Q ss_pred CccCEEEEE-eCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 36 SSMPTFVFV-KSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 36 ~~~Pt~~~~-~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
..+|+++++ ++|+.+.++.|. +.++|.+.|++++
T Consensus 148 ~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~lL 183 (183)
T 2obi_A 148 KWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPHYF 183 (183)
T ss_dssp CSTTCEEEECTTSCEEEEECTTSCTHHHHTTSGGGC
T ss_pred cccceEEEECCCCCEEEEeCCCCCHHHHHHHHHHhC
Confidence 346998888 799999999998 8888988887653
No 213
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=97.73 E-value=0.00019 Score=39.68 Aligned_cols=34 Identities=9% Similarity=-0.018 Sum_probs=28.1
Q ss_pred CccCEEEEE-eCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 36 SSMPTFVFV-KSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 36 ~~~Pt~~~~-~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
...||.+++ ++|+.+.++.|. +.+.|.+.|++.+
T Consensus 171 ~~~p~tflID~~G~i~~~~~g~~~~~~l~~~I~~ll 206 (208)
T 2f8a_A 171 AWNFEKFLVGPDGVPLRRYSRRFQTIDIEPDIEALL 206 (208)
T ss_dssp CSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHH
T ss_pred ccCceEEEEcCCCcEEEEeCCCCCHHHHHHHHHHHh
Confidence 344887777 899999999998 8889999888765
No 214
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=97.71 E-value=0.00019 Score=39.25 Aligned_cols=41 Identities=12% Similarity=0.217 Sum_probs=27.3
Q ss_pred HHHHHcCCC-ccC---------------EEEEE-eCCeEEeeeeCC-CHHHHHHHHHhh
Q psy11066 28 DIAMAYDIS-SMP---------------TFVFV-KSTAKVEQFSGA-NFDKLRSTVLAN 68 (70)
Q Consensus 28 ~~~~~~~i~-~~P---------------t~~~~-~~g~~~~~~~g~-~~~~l~~~i~~~ 68 (70)
.+++.|++. +.| +++++ ++|+.+..+.|. +.+.+.+.|.+.
T Consensus 119 ~~~~~~gv~~~~p~~~~~~~~~~~~~~~~~~liD~~G~i~~~~~g~~~~~~~~~~i~~~ 177 (200)
T 2b7k_A 119 NACKKYRVYFSTPPNVKPGQDYLVDHSIFFYLMDPEGQFVDALGRNYDEKTGVDKIVEH 177 (200)
T ss_dssp HHHHHTTC--------------CTTTCCCEEEECTTSCEEEEECTTCCTTHHHHHHHHH
T ss_pred HHHHHcCcEEeeccccCCCCCceeeecceEEEECCCCcEEEEeCCCCCHHHHHHHHHHH
Confidence 567888887 454 55555 899999999887 766666666544
No 215
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=97.69 E-value=0.00027 Score=41.54 Aligned_cols=67 Identities=16% Similarity=0.205 Sum_probs=51.6
Q ss_pred hHHHHHHHhhCC---CcEEEEEeCcCcHHHH----HHcCCC-ccCEEEEEeC--CeEEee-ee---CC-CHHHHHHHHHh
Q psy11066 3 LVMLQELASEFP---DVVFLKVDVDESEDIA----MAYDIS-SMPTFVFVKS--TAKVEQ-FS---GA-NFDKLRSTVLA 67 (70)
Q Consensus 3 ~p~~~~~~~~~~---~i~~~~vd~~~~~~~~----~~~~i~-~~Pt~~~~~~--g~~~~~-~~---g~-~~~~l~~~i~~ 67 (70)
.+.+.++++++. .+.|+.+|+++.+.++ +.||+. +.|++++++. ++.-.. +. |. +.+.|.+|++.
T Consensus 264 ~~~~~~vA~~~~~~~~~~f~~id~~~~~~~~~~~~~~~gi~~~~P~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~F~~d 343 (350)
T 1sji_A 264 LEILKQVARDNTDNPDLSIVWIDPDDFPLLVAYWEKTFKIDLFKPQIGVVNVTDADSVWMEIPDDDDLPTAEELEDWIED 343 (350)
T ss_dssp HHHHHHHHHHGGGCSSCCEEEECGGGCHHHHHHHHHHCCSCTTSCEEEEEESSSSCEEESCSSCCSCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCceEEEEECchhhHHHHHHHHhhcCCCccCCcEEEEecccccccccCCCcccccCCHHHHHHHHHH
Confidence 467888898884 4999999999988877 789998 5899999964 422221 22 46 89999999988
Q ss_pred hc
Q psy11066 68 NR 69 (70)
Q Consensus 68 ~~ 69 (70)
.+
T Consensus 344 ~~ 345 (350)
T 1sji_A 344 VL 345 (350)
T ss_dssp HH
T ss_pred Hh
Confidence 75
No 216
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=97.68 E-value=0.00081 Score=37.97 Aligned_cols=67 Identities=19% Similarity=0.240 Sum_probs=50.4
Q ss_pred hHHHHHHHhhCCCcEEEEEeCcCcHHHHHHcCCCc--c-CEEEEEeCCeEEeeee-CC-CHHHHHHHHHhhc
Q psy11066 3 LVMLQELASEFPDVVFLKVDVDESEDIAMAYDISS--M-PTFVFVKSTAKVEQFS-GA-NFDKLRSTVLANR 69 (70)
Q Consensus 3 ~p~~~~~~~~~~~i~~~~vd~~~~~~~~~~~~i~~--~-Pt~~~~~~g~~~~~~~-g~-~~~~l~~~i~~~~ 69 (70)
...+.++++++..+.|+.+|.++.....+.||+.. . |.++++........+. +. +.+.|.+|++.++
T Consensus 156 ~~~~~~vAk~~kki~F~~~d~~~~~~~l~~fgl~~~~~~p~~~~~~~~~~ky~~~~~~~t~~~i~~Fv~~~~ 227 (250)
T 3ec3_A 156 RNKVLEVAKDFPEYTFAIADEEDYATEVKDLGLSESGGDVNAAILDESGKKFAMEPEEFDSDALREFVMAFK 227 (250)
T ss_dssp HHHHHHHHTTCTTSEEEEEETTTTHHHHHHTTCSSCSCSCEEEEECTTSCEEECCCCSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcceeEEEEcHHHHHHHHHHcCCCccCCCcEEEEEcCCCceecCCcccCCHHHHHHHHHHHH
Confidence 45677888888789999999999888889999874 4 4676665433334444 45 8999999998765
No 217
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=97.68 E-value=0.00029 Score=39.81 Aligned_cols=62 Identities=15% Similarity=0.257 Sum_probs=47.9
Q ss_pred hHHHHHHHhhC-CCcEEEEEeCcCcHHHHHHcCCCccCEEEEEeCC-------eEEeee-eCC-CHHHHHHHHHhh
Q psy11066 3 LVMLQELASEF-PDVVFLKVDVDESEDIAMAYDISSMPTFVFVKST-------AKVEQF-SGA-NFDKLRSTVLAN 68 (70)
Q Consensus 3 ~p~~~~~~~~~-~~i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g-------~~~~~~-~g~-~~~~l~~~i~~~ 68 (70)
.+.|.+++..+ .++.|+... +.++++.|++.+ |++++|+.+ .....+ .|. +.+.|.+||...
T Consensus 40 ~~~f~~~A~~lr~~~~F~~~~---~~~v~~~~~~~~-p~i~~fk~~~~~~kf~e~~~~y~~g~~~~~~l~~fi~~~ 111 (252)
T 2h8l_A 40 HSEFLKAASNLRDNYRFAHTN---VESLVNEYDDNG-EGIILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQEN 111 (252)
T ss_dssp HHHHHHHHHHTTTTSCEEEEC---CHHHHHHHCSSS-EEEEEECCGGGCCTTSCSEEECCCSSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhcccCcEEEEEC---hHHHHHHhCCCC-CcEEEEcchhhcccccccccccCCCCcCHHHHHHHHHhc
Confidence 35688888888 458888773 467899999997 999999853 223456 787 999999999875
No 218
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=97.66 E-value=0.00013 Score=41.17 Aligned_cols=66 Identities=9% Similarity=0.068 Sum_probs=49.6
Q ss_pred HHHHHHHhhCC-C---cEEEEEeCcCcHHHHHHcCC----CccCEEEEEeCCeEEeeeeCC-CHHH--HHHHHHhhc
Q psy11066 4 VMLQELASEFP-D---VVFLKVDVDESEDIAMAYDI----SSMPTFVFVKSTAKVEQFSGA-NFDK--LRSTVLANR 69 (70)
Q Consensus 4 p~~~~~~~~~~-~---i~~~~vd~~~~~~~~~~~~i----~~~Pt~~~~~~g~~~~~~~g~-~~~~--l~~~i~~~~ 69 (70)
..+.++++++. . +.|+.+|.+....+.+.||+ ..+|.++++........+.+. +.+. |.+|++.++
T Consensus 153 ~~~~~vA~~~~~k~~~~~F~~~d~~~~~~~~~~fgl~~~~~~~P~v~i~~~~~~ky~~~~~~t~~~~~i~~F~~~~~ 229 (252)
T 2h8l_A 153 NRVMMVAKKFLDAGHKLNFAVASRKTFSHELSDFGLESTAGEIPVVAIRTAKGEKFVMQEEFSRDGKALERFLQDYF 229 (252)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEEETTTTHHHHGGGTCCCCSCSSCEEEEECTTSCEEECCSCCCTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHccccCceEEEEEEchHHHHHHHHHcCCCCccCCCCEEEEEeCcCcEecCCcccCcchHHHHHHHHHHH
Confidence 45666777763 2 99999999999999999999 369999998532233445566 7777 999998764
No 219
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=97.66 E-value=7.9e-05 Score=40.51 Aligned_cols=42 Identities=21% Similarity=0.220 Sum_probs=34.3
Q ss_pred cHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 26 SEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 26 ~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
+...+.++||+++||+++ ||+.+....|. +.+.+.+.|+..+
T Consensus 141 ~~~~a~~~gv~GtPtfvv--ng~~~v~~~Ga~~~e~~~~~i~~ll 183 (185)
T 3feu_A 141 AKMLSEKSGISSVPTFVV--NGKYNVLIGGHDDPKQIADTIRYLL 183 (185)
T ss_dssp HHHHHHHHTCCSSSEEEE--TTTEEECGGGCSSHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCccCEEEE--CCEEEEecCCCCCHHHHHHHHHHHH
Confidence 345678999999999996 88876666888 9999998888764
No 220
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=97.66 E-value=0.00015 Score=39.04 Aligned_cols=32 Identities=9% Similarity=-0.015 Sum_probs=27.0
Q ss_pred cCEEEEE-eCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 38 MPTFVFV-KSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 38 ~Pt~~~~-~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
+|+++++ ++|+.+.++.|. +.++|.+.|++.+
T Consensus 152 ~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~lL 185 (185)
T 2gs3_A 152 NFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPHYF 185 (185)
T ss_dssp SCCEEEECTTSCEEEEECTTSCGGGGGGGHHHHC
T ss_pred cceEEEECCCCCEEEeeCCCCCHHHHHHHHHHhC
Confidence 5888888 799999999998 8888888887754
No 221
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=97.64 E-value=0.00068 Score=35.47 Aligned_cols=33 Identities=9% Similarity=-0.005 Sum_probs=27.0
Q ss_pred cHHHHHHcCCCccC-------EEEEEeCCeEEeeeeCC-CHH
Q psy11066 26 SEDIAMAYDISSMP-------TFVFVKSTAKVEQFSGA-NFD 59 (70)
Q Consensus 26 ~~~~~~~~~i~~~P-------t~~~~~~g~~~~~~~g~-~~~ 59 (70)
...+++.|++...| |+++ ++|+.+.++.|. +..
T Consensus 100 ~~~~~~~~gv~~~p~~g~~~~~~li-~~G~i~~~~~g~~~~~ 140 (159)
T 2a4v_A 100 KREFIGLLGAKKTPLSGSIRSHFIF-VDGKLKFKRVKISPEV 140 (159)
T ss_dssp TCHHHHHHTCBSSSSSCBCCEEEEE-ETTEEEEEEESCCHHH
T ss_pred ccHHHHHhCCcccccCCccceEEEE-cCCEEEEEEccCCccc
Confidence 34678899999999 6777 999999999997 443
No 222
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=97.63 E-value=0.0006 Score=35.90 Aligned_cols=36 Identities=19% Similarity=0.428 Sum_probs=29.6
Q ss_pred CCCccCEEEEE-eCCeEEeeeeCC-C--HHHHHHHHHhhc
Q psy11066 34 DISSMPTFVFV-KSTAKVEQFSGA-N--FDKLRSTVLANR 69 (70)
Q Consensus 34 ~i~~~Pt~~~~-~~g~~~~~~~g~-~--~~~l~~~i~~~~ 69 (70)
++...|+++++ ++|+.+.++.|. . .++|.+.|++++
T Consensus 132 ~~~~~p~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll 171 (174)
T 1xzo_A 132 QVIHQSSFYLVGPDGKVLKDYNGVENTPYDDIISDVKSAS 171 (174)
T ss_dssp SCCSCCEEEEECTTSEEEEEEESSSSCCHHHHHHHHHHHT
T ss_pred eeeeeeEEEEECCCCeEEEEEcCCCCCCHHHHHHHHHHHH
Confidence 46778987777 799999999997 3 688999998775
No 223
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=97.61 E-value=0.00045 Score=38.38 Aligned_cols=64 Identities=11% Similarity=0.215 Sum_probs=46.8
Q ss_pred hHHHHHHHhhCC--CcEEEEEeCcC----------------------------cHHHHHHcCCC------ccCEEEEE-e
Q psy11066 3 LVMLQELASEFP--DVVFLKVDVDE----------------------------SEDIAMAYDIS------SMPTFVFV-K 45 (70)
Q Consensus 3 ~p~~~~~~~~~~--~i~~~~vd~~~----------------------------~~~~~~~~~i~------~~Pt~~~~-~ 45 (70)
.|.|.++.+++. ++.++.|++|. ...++..|++. ++|+++++ +
T Consensus 89 ~p~l~~l~~~~~~~~v~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~ygv~~~~~g~~~P~~~lID~ 168 (222)
T 3ztl_A 89 IIAFSDQVEEFNSRNCQVIACSTDSQYSHLAWDNLDRKSGGLGHMKIPLLADRKQEISKAYGVFDEEDGNAFRGLFIIDP 168 (222)
T ss_dssp HHHHHHTHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTSCCSCSSCEEECSSSHHHHHTTCBCTTTSSBCEEEEEECT
T ss_pred HHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHhhhhccccccceeEEeCCchHHHHHcCCeecCCCCccceEEEECC
Confidence 467778877773 48888777763 23577889999 89999999 6
Q ss_pred CCeEEeeeeCC-C----HHHHHHHHH
Q psy11066 46 STAKVEQFSGA-N----FDKLRSTVL 66 (70)
Q Consensus 46 ~g~~~~~~~g~-~----~~~l~~~i~ 66 (70)
+|+.+..+.|. + .+++.+.|+
T Consensus 169 ~G~I~~~~~g~~~~~~~~~~il~~l~ 194 (222)
T 3ztl_A 169 NGILRQITINDKPVGRSVDETLRLLD 194 (222)
T ss_dssp TSEEEEEEEECTTBCCCHHHHHHHHH
T ss_pred CCeEEEEEecCCCCCCCHHHHHHHHH
Confidence 99999988875 3 345555554
No 224
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=97.55 E-value=0.00037 Score=36.51 Aligned_cols=66 Identities=18% Similarity=0.234 Sum_probs=45.5
Q ss_pred hHHHHHHHhhCC--CcEEEEEeCc---------------------CcHHHHHHcCCCc------------cCEEEEE-eC
Q psy11066 3 LVMLQELASEFP--DVVFLKVDVD---------------------ESEDIAMAYDISS------------MPTFVFV-KS 46 (70)
Q Consensus 3 ~p~~~~~~~~~~--~i~~~~vd~~---------------------~~~~~~~~~~i~~------------~Pt~~~~-~~ 46 (70)
.|.+.++.++++ ++.++.|..| ....+++.|++.. +|+++++ ++
T Consensus 55 ~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~~~~~~~~~~~~p~~~lid~~ 134 (163)
T 3gkn_A 55 GLDFNALLPEFDKAGAKILGVSRDSVKSHDNFCAKQGFAFPLVSDGDEALCRAFDVIKEKNMYGKQVLGIERSTFLLSPE 134 (163)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHCCSSCEEECTTCHHHHHTTCEEEEEETTEEEEEECCEEEEECTT
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhCCCceEEECCcHHHHHHhCCccccccccccccCcceEEEEECCC
Confidence 356666666663 3777777665 2345778899987 9999999 68
Q ss_pred CeEEeeeeCC-C---HHHHHHHHHhh
Q psy11066 47 TAKVEQFSGA-N---FDKLRSTVLAN 68 (70)
Q Consensus 47 g~~~~~~~g~-~---~~~l~~~i~~~ 68 (70)
|+.+..+.|. . .+++.+.|++.
T Consensus 135 G~i~~~~~~~~~~~~~~~il~~l~~l 160 (163)
T 3gkn_A 135 GQVVQAWRKVKVAGHADAVLAALKAH 160 (163)
T ss_dssp SCEEEEECSCCSTTHHHHHHHHHHHH
T ss_pred CeEEEEEcCCCcccCHHHHHHHHHHH
Confidence 9998888765 3 24555555544
No 225
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=97.55 E-value=0.00016 Score=38.95 Aligned_cols=38 Identities=16% Similarity=0.266 Sum_probs=30.0
Q ss_pred HHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 27 EDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 27 ~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
..++.++||.++||+++ ||+. +.|. +.+.|.+.|++.+
T Consensus 139 ~~~a~~~gv~GtPt~vv--nG~~---~~G~~~~~~l~~~i~~~~ 177 (186)
T 3bci_A 139 KKIAKDNHIKTTPTAFI--NGEK---VEDPYDYESYEKLLKDKI 177 (186)
T ss_dssp HHHHHHTTCCSSSEEEE--TTEE---CSCTTCHHHHHHHHHC--
T ss_pred HHHHHHcCCCCCCeEEE--CCEE---cCCCCCHHHHHHHHHHHH
Confidence 45678999999999987 8864 4688 9999999988654
No 226
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=97.54 E-value=7e-05 Score=40.55 Aligned_cols=40 Identities=20% Similarity=0.199 Sum_probs=31.9
Q ss_pred HHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 28 DIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 28 ~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
..+.++||.++||+++ ||+......|. +.+.+.+.|+..+
T Consensus 143 ~~a~~~gv~gtPt~~v--ng~~~~~~~G~~~~e~l~~~i~~l~ 183 (192)
T 3h93_A 143 KLAMAYQVTGVPTMVV--NGKYRFDIGSAGGPEETLKLADYLI 183 (192)
T ss_dssp HHHHHHTCCSSSEEEE--TTTEEEEHHHHTSHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCCeEEE--CCEEEecccccCCHHHHHHHHHHHH
Confidence 4567889999999987 88877776688 8888888877653
No 227
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=97.46 E-value=0.00067 Score=33.23 Aligned_cols=51 Identities=12% Similarity=0.262 Sum_probs=38.0
Q ss_pred CcEEEEEeCcCcHHHHHHc-----CCCccCEEEEEeCCeEEeeeeCCCHHHHHHHHHhhc
Q psy11066 15 DVVFLKVDVDESEDIAMAY-----DISSMPTFVFVKSTAKVEQFSGANFDKLRSTVLANR 69 (70)
Q Consensus 15 ~i~~~~vd~~~~~~~~~~~-----~i~~~Pt~~~~~~g~~~~~~~g~~~~~l~~~i~~~~ 69 (70)
++.|..+|++++++..+.+ |.+++|+++ +.+|+. ..|++.++|.++|.+..
T Consensus 28 gi~y~~idi~~d~~~~~~~~~~~~G~~tVP~I~-i~Dg~~---l~~~~~~el~~~L~el~ 83 (92)
T 2lqo_A 28 RIAYDEVDIEHNRAAAEFVGSVNGGNRTVPTVK-FADGST---LTNPSADEVKAKLVKIA 83 (92)
T ss_dssp TCCCEEEETTTCHHHHHHHHHHSSSSSCSCEEE-ETTSCE---EESCCHHHHHHHHHHHH
T ss_pred CCceEEEEcCCCHHHHHHHHHHcCCCCEeCEEE-EeCCEE---EeCCCHHHHHHHHHHhc
Confidence 5888899998877654433 788999975 457754 45678889999998764
No 228
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=97.46 E-value=0.00045 Score=39.46 Aligned_cols=66 Identities=15% Similarity=0.146 Sum_probs=48.0
Q ss_pred hHHHHHHHhhCC--CcEEEEEeCcC---------------------------cHHHHHHcCCC-------ccCEEEEE-e
Q psy11066 3 LVMLQELASEFP--DVVFLKVDVDE---------------------------SEDIAMAYDIS-------SMPTFVFV-K 45 (70)
Q Consensus 3 ~p~~~~~~~~~~--~i~~~~vd~~~---------------------------~~~~~~~~~i~-------~~Pt~~~~-~ 45 (70)
.|.|.++.++|. ++.++.|++|. ...+++.|++. ++|+++++ +
T Consensus 53 l~~l~~l~~ef~~~gv~VI~VS~Ds~~~~~~w~~~~~~~~~~~i~fPil~D~~~~ia~~ygv~~~~~g~~~~p~~fIID~ 132 (249)
T 3a2v_A 53 FVSFARRYEDFQRLGVDLIGLSVDSVFSHIKWKEWIERHIGVRIPFPIIADPQGTVARRLGLLHAESATHTVRGVFIVDA 132 (249)
T ss_dssp HHHHHHTHHHHHHTTEEEEEEESSCHHHHHHHHHHHHHHTCCCCCSCEEECTTSHHHHHHTCCCTTCSSSCCEEEEEECT
T ss_pred HHHHHHHHHHHHhCCcEEEEEECCCHHHHHHHHHHHHHhcCCCCceeEEECCchHHHHHhCCccccCCCcccceEEEECC
Confidence 355666666664 47777777753 34578899997 89998888 6
Q ss_pred CCeEEeeeeCC-----CHHHHHHHHHhh
Q psy11066 46 STAKVEQFSGA-----NFDKLRSTVLAN 68 (70)
Q Consensus 46 ~g~~~~~~~g~-----~~~~l~~~i~~~ 68 (70)
+|+.+....|. +.+++...|+..
T Consensus 133 dG~I~~~~~~~~~~gr~~~Ellr~I~al 160 (249)
T 3a2v_A 133 RGVIRTMLYYPMELGRLVDEILRIVKAL 160 (249)
T ss_dssp TSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred CCeEEEEEecCCcccchhHHHHHHHHHH
Confidence 89988887764 467788777654
No 229
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=97.44 E-value=0.00033 Score=38.57 Aligned_cols=38 Identities=16% Similarity=0.359 Sum_probs=31.2
Q ss_pred HHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 27 EDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 27 ~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
...+.++||.++||+++ ||+. +.|. +.+.|.+.|++.+
T Consensus 153 ~~~a~~~gV~gtPtfvv--nG~~---~~G~~~~e~l~~~i~~~~ 191 (202)
T 3gha_A 153 SDLNQKMNIQATPTIYV--NDKV---IKNFADYDEIKETIEKEL 191 (202)
T ss_dssp HHHHHHTTCCSSCEEEE--TTEE---CSCTTCHHHHHHHHHHHH
T ss_pred HHHHHHcCCCcCCEEEE--CCEE---ecCCCCHHHHHHHHHHHH
Confidence 45678999999999987 8865 5688 9999999988654
No 230
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=97.43 E-value=0.00022 Score=37.95 Aligned_cols=36 Identities=22% Similarity=0.225 Sum_probs=28.7
Q ss_pred cHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHH
Q psy11066 26 SEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVL 66 (70)
Q Consensus 26 ~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~ 66 (70)
...+++++||.++||+++ ||+. +.|. +.+.|.+.|+
T Consensus 138 ~~~~a~~~gv~gtPt~vv--ng~~---~~G~~~~~~l~~~i~ 174 (175)
T 1z6m_A 138 VIAEANAAHIQFVPTIII--GEYI---FDESVTEEELRGYIE 174 (175)
T ss_dssp HHHHHHHHTCCSSCEEEE--TTEE---ECTTCCHHHHHHHHT
T ss_pred HHHHHHHcCCCCcCeEEE--CCEE---ccCCCCHHHHHHHhc
Confidence 345688999999999765 8863 5788 8999988875
No 231
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.43 E-value=0.00011 Score=37.95 Aligned_cols=51 Identities=14% Similarity=0.060 Sum_probs=33.2
Q ss_pred cEEEEEeCcCc---H----HHHHHcCCCccCEEEEEeCCeEEeee---eCC-CHHHHHHHHHhh
Q psy11066 16 VVFLKVDVDES---E----DIAMAYDISSMPTFVFVKSTAKVEQF---SGA-NFDKLRSTVLAN 68 (70)
Q Consensus 16 i~~~~vd~~~~---~----~~~~~~~i~~~Pt~~~~~~g~~~~~~---~g~-~~~~l~~~i~~~ 68 (70)
+.+..+|++.. + .+++.+++.++|+++ .+|+.+..+ .+. ..+.|.++|+..
T Consensus 52 i~~~~vdid~~~~~~~~~~~l~~~~g~~~vP~l~--i~G~~igg~~~l~~~~~~~~L~~~L~~~ 113 (130)
T 2cq9_A 52 VNYKVVELDLLEYGNQFQDALYKMTGERTVPRIF--VNGTFIGGATDTHRLHKEGKLLPLVHQC 113 (130)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHHHSSCCSSEEE--ETTEEEEEHHHHHHHHHHTSSHHHHHHH
T ss_pred CCcEEEECcCCcCcHHHHHHHHHHhCCCCcCEEE--ECCEEEcChHHHHHHHHcCcHHHHHHHc
Confidence 44556666654 3 377899999999984 488776543 233 445677776653
No 232
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=97.41 E-value=0.00078 Score=38.04 Aligned_cols=63 Identities=17% Similarity=0.291 Sum_probs=46.6
Q ss_pred hHHHHHHHhhC-CCcEEEEEeCcCcHHHHHHcCCCccCEEEEEeCC-------eEEeeee--CC-CHHHHHHHHHhhc
Q psy11066 3 LVMLQELASEF-PDVVFLKVDVDESEDIAMAYDISSMPTFVFVKST-------AKVEQFS--GA-NFDKLRSTVLANR 69 (70)
Q Consensus 3 ~p~~~~~~~~~-~~i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g-------~~~~~~~--g~-~~~~l~~~i~~~~ 69 (70)
.+.|.++++.+ +++.|+... ..+++.+|++.. |++++|+.+ .....+. |. +.+.|.+||....
T Consensus 41 ~~~F~~~A~~lr~~~~F~~t~---~~~v~~~~~v~~-p~ivlfk~~~~~~kfde~~~~y~g~~~~~~~~l~~fi~~~~ 114 (250)
T 3ec3_A 41 YLQYQDAANTLREDYKFHHTF---STEIAKFLKVSL-GKLVLMQPEKFQSKYEPRMHVMDVQGSTEASAIKDYVVKHA 114 (250)
T ss_dssp HHHHHHHHHHHTTTCCEEEEC---CHHHHHHHTCCS-SEEEEECCGGGCCTTSCSCEEEECCTTSCHHHHHHHHHHHS
T ss_pred HHHHHHHHHhhhcCcEEEEEC---cHHHHHHcCCCC-CeEEEEecchhhccccccceeccCCCCCCHHHHHHHHHHcC
Confidence 45678888887 458888753 567889999988 999999853 2233455 45 8999999998653
No 233
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=97.40 E-value=0.00049 Score=32.95 Aligned_cols=35 Identities=23% Similarity=0.251 Sum_probs=28.2
Q ss_pred HHHHHHcCCCccCEEEEEeCCeEEeeeeCCCHHHHHHHHH
Q psy11066 27 EDIAMAYDISSMPTFVFVKSTAKVEQFSGANFDKLRSTVL 66 (70)
Q Consensus 27 ~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~l~~~i~ 66 (70)
+++.+.+++.++|++++ +|+ .+.|++.+.|.++|.
T Consensus 57 ~~l~~~~g~~~vP~l~~--~g~---~i~G~~~~~l~~~l~ 91 (92)
T 3ic4_A 57 EKVHSISGSYSVPVVVK--GDK---HVLGYNEEKLKELIR 91 (92)
T ss_dssp HHHHHHHSSSCSCEEEE--TTE---EEESCCHHHHHHHHH
T ss_pred HHHHHhcCCCCcCEEEE--CCE---EEeCCCHHHHHHHhc
Confidence 56678899999999986 774 355779999998875
No 234
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=97.36 E-value=0.0005 Score=36.79 Aligned_cols=67 Identities=19% Similarity=0.319 Sum_probs=45.0
Q ss_pred chHHHHHHHhhCCC--cEEEEEeCcC-----------cHHHHHH-cCCC--------------------------ccCE-
Q psy11066 2 SLVMLQELASEFPD--VVFLKVDVDE-----------SEDIAMA-YDIS--------------------------SMPT- 40 (70)
Q Consensus 2 ~~p~~~~~~~~~~~--i~~~~vd~~~-----------~~~~~~~-~~i~--------------------------~~Pt- 40 (70)
..|.+.++.+++++ +.++.|+++. ....+++ +++. ++|+
T Consensus 56 ~~p~l~~l~~~~~~~~~~vi~is~d~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~p~~ 135 (180)
T 3kij_A 56 NYLGLKELHKEFGPSHFSVLAFPCNQFGESEPRPSKEVESFARKNYGVTFPIFHKIKILGSEGEPAFRFLVDSSKKEPRW 135 (180)
T ss_dssp HHHHHHHHHHHHTTTSEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSSTTCCHHHHHHHHHHTCCCSS
T ss_pred HHHHHHHHHHHhccCCeEEEEEECCccccCCCCCHHHHHHHHHHhcCCCCceeeeeeccCccccHHHHHHHhcCCCCccc
Confidence 35788999988864 8888887642 1234444 4322 2575
Q ss_pred ----EEEEeCCeEEeeeeCC-CHHHHHHHHHhh
Q psy11066 41 ----FVFVKSTAKVEQFSGA-NFDKLRSTVLAN 68 (70)
Q Consensus 41 ----~~~~~~g~~~~~~~g~-~~~~l~~~i~~~ 68 (70)
+++-++|+.+.++.|. +.+.+.+.|.+.
T Consensus 136 ~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~l 168 (180)
T 3kij_A 136 NFWKYLVNPEGQVVKFWRPEEPIEVIRPDIAAL 168 (180)
T ss_dssp TTCEEEECTTSCEEEEECTTCCGGGTHHHHHHH
T ss_pred cceEEEECCCCCEEEEECCCCCHHHHHHHHHHH
Confidence 4444899999999998 777666666554
No 235
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=97.35 E-value=0.00015 Score=39.13 Aligned_cols=41 Identities=10% Similarity=0.103 Sum_probs=31.4
Q ss_pred HHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 27 EDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 27 ~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
...+.++||.++||+++ ||+......|. +.+.+.+.|+..+
T Consensus 152 ~~~a~~~gv~gtPt~~i--ng~~~~~~~g~~~~~~l~~~i~~~l 193 (195)
T 3c7m_A 152 KASYDVAKIQGVPAYVV--NGKYLIYTKSIKSIDAMADLIRELA 193 (195)
T ss_dssp GGHHHHHHHHCSSEEEE--TTTEEECGGGCCCHHHHHHHHHHHH
T ss_pred HHHHHHcCCCccCEEEE--CCEEEeccCCCCCHHHHHHHHHHHH
Confidence 44578899999999765 78754334488 8999999998765
No 236
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=97.35 E-value=0.00083 Score=39.92 Aligned_cols=67 Identities=19% Similarity=0.248 Sum_probs=50.2
Q ss_pred hHHHHHHHhhCCC---cEEEEEeCcCcHHH----HHHcCCC-ccCEEEEEeCCe---EEeeeeC---C-CHHHHHHHHHh
Q psy11066 3 LVMLQELASEFPD---VVFLKVDVDESEDI----AMAYDIS-SMPTFVFVKSTA---KVEQFSG---A-NFDKLRSTVLA 67 (70)
Q Consensus 3 ~p~~~~~~~~~~~---i~~~~vd~~~~~~~----~~~~~i~-~~Pt~~~~~~g~---~~~~~~g---~-~~~~l~~~i~~ 67 (70)
.+.+.++++++.+ +.|+.+|++..+.. .+.||+. .+|+++++.... ....+.+ . +.+.|.+|++.
T Consensus 266 ~~~l~~vA~~~~~~~ki~F~~id~~~~~~~l~~~~~~fgl~~~~P~~~i~~~~~~~~~~y~~~~~~~~~t~~~i~~F~~~ 345 (367)
T 3us3_A 266 LEILKSVAQDNTDNPDLSIIWIDPDDFPLLVPYWEKTFDIDLSAPQIGVVNVTDADSVWMEMDDEEDLPSAEELEDWLED 345 (367)
T ss_dssp HHHHHHHHHHTTTCTTCCEEEECGGGCTTTHHHHHHHHTCCTTSCEEEEEETTTCCEEECCCCTTSCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCceEEEEECCccchhHHHHHHHhcCCCCCCCeEEEEecccccceeecCCcccccCCHHHHHHHHHH
Confidence 4568889999864 99999999987654 3458887 899999996432 2233443 5 89999999987
Q ss_pred hc
Q psy11066 68 NR 69 (70)
Q Consensus 68 ~~ 69 (70)
++
T Consensus 346 ~~ 347 (367)
T 3us3_A 346 VL 347 (367)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 237
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=97.31 E-value=0.0012 Score=39.29 Aligned_cols=63 Identities=14% Similarity=0.112 Sum_probs=46.2
Q ss_pred HHHHHhhCCC-cEEEEEeCcCcHHHHHHcCCC--ccCEEEEEeCCeEEeee---eCC-CHHHHHHHHHhhc
Q psy11066 6 LQELASEFPD-VVFLKVDVDESEDIAMAYDIS--SMPTFVFVKSTAKVEQF---SGA-NFDKLRSTVLANR 69 (70)
Q Consensus 6 ~~~~~~~~~~-i~~~~vd~~~~~~~~~~~~i~--~~Pt~~~~~~g~~~~~~---~g~-~~~~l~~~i~~~~ 69 (70)
+.+++.++.+ +.|+.+|+++...+.+.||+. .+|.++++..++. ..+ .+. +.+.|.+|+..++
T Consensus 259 ~~~~~~~~~~~i~f~~id~~~~~~~~~~~gl~~~~~P~i~i~~~~~~-y~~~~~~~~~~~~~i~~F~~d~~ 328 (382)
T 2r2j_A 259 VARQLISEKGTINFLHADCDKFRHPLLHIQKTPADCPVIAIDSFRHM-YVFGDFKDVLIPGKLKQFVFDLH 328 (382)
T ss_dssp HHHHTGGGTTTSEEEEEETTTTHHHHHHTTCCGGGCSEEEEECSSCE-EECCCSGGGGSTTHHHHHHHHHH
T ss_pred HHHHHHHhCCeeEEEEEchHHhHHHHHHcCCCccCCCEEEEEcchhc-CCCCccccccCHHHHHHHHHHHH
Confidence 3444445554 999999999999999999997 7899988865432 222 234 5688999998764
No 238
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=97.31 E-value=0.00028 Score=38.40 Aligned_cols=36 Identities=22% Similarity=0.226 Sum_probs=30.4
Q ss_pred HHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHH
Q psy11066 28 DIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTV 65 (70)
Q Consensus 28 ~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i 65 (70)
..+.++||.++||+++ ||+.+..+.|. +.+++.++|
T Consensus 145 ~~a~~~GV~gtPtf~i--ng~~~~~~s~~~~~e~w~~~l 181 (182)
T 3gn3_A 145 KYARQNGIHVSPTFMI--NGLVQPGMSSGDPVSKWVSDI 181 (182)
T ss_dssp HHHHHHTCCSSSEEEE--TTEECTTCCTTSCHHHHHHHH
T ss_pred HHHHHCCCCccCEEEE--CCEEccCCCCCCCHHHHHHHh
Confidence 4578899999999986 89888778888 888888776
No 239
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=97.29 E-value=0.00049 Score=38.11 Aligned_cols=37 Identities=30% Similarity=0.585 Sum_probs=30.7
Q ss_pred HHH-HHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 28 DIA-MAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 28 ~~~-~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
..+ +++||+++||+++ ||+. +.|. +.+.|.+.|++.+
T Consensus 158 ~~a~~~~GV~GtPtfvv--ng~~---~~G~~~~e~l~~~i~~~~ 196 (205)
T 3gmf_A 158 DEAINQYNVSGTPSFMI--DGIL---LAGTHDWASLRPQILARL 196 (205)
T ss_dssp HHHHHHHCCCSSSEEEE--TTEE---CTTCCSHHHHHHHHHHHH
T ss_pred HHHHHHcCCccCCEEEE--CCEE---EeCCCCHHHHHHHHHHHh
Confidence 456 8899999999986 7863 6788 9999999998764
No 240
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=97.25 E-value=0.00038 Score=37.60 Aligned_cols=39 Identities=21% Similarity=0.181 Sum_probs=28.0
Q ss_pred HHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 27 EDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 27 ~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
..++.++||.++||+++ ||+.+ +.|. +.+.|.+.|++.+
T Consensus 140 ~~~a~~~gv~gtPt~vi--ng~~~--~~g~~~~~~l~~~i~~~l 179 (195)
T 2znm_A 140 QKLTEQYRIDSTPTVIV--GGKYR--VIFNNGFDGGVHTIKELV 179 (195)
T ss_dssp HHHHHHTTCCSSSEEEE--TTTEE--ECCCSHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCeEEE--CCEEE--EcCCCCHHHHHHHHHHHH
Confidence 45678999999999654 77643 4576 7777777776543
No 241
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=97.22 E-value=0.00018 Score=37.93 Aligned_cols=50 Identities=14% Similarity=0.073 Sum_probs=32.1
Q ss_pred cEEEEEeCcCc---H----HHHHHcCCCccCEEEEEeCCeEEeee---eCC-CHHHHHHHHHh
Q psy11066 16 VVFLKVDVDES---E----DIAMAYDISSMPTFVFVKSTAKVEQF---SGA-NFDKLRSTVLA 67 (70)
Q Consensus 16 i~~~~vd~~~~---~----~~~~~~~i~~~Pt~~~~~~g~~~~~~---~g~-~~~~l~~~i~~ 67 (70)
+.+..+|++.. + .+++.+++.++|+++ .+|+.+..+ .+. ..+.|.++|+.
T Consensus 74 i~~~~vdId~~~~~~~~~~~L~~~~g~~tvP~if--i~G~~igG~d~l~~l~~~g~L~~~L~~ 134 (146)
T 2ht9_A 74 VNYKVVELDLLEYGNQFQDALYKMTGERTVPRIF--VNGTFIGGATDTHRLHKEGKLLPLVHQ 134 (146)
T ss_dssp CCCEEEEGGGCTTHHHHHHHHHHHHSCCCSCEEE--ETTEEEESHHHHHHHHHTTCHHHHHHH
T ss_pred CCeEEEECccCcCCHHHHHHHHHHhCCCCcCeEE--ECCEEEeCchHHHHHHHcChHHHHHHH
Confidence 44555666544 3 378899999999984 488766443 233 34567777664
No 242
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=97.10 E-value=0.00081 Score=36.19 Aligned_cols=39 Identities=15% Similarity=0.127 Sum_probs=27.8
Q ss_pred HHHHHHcCCCccCEEEEEeCCeEEeeeeCCCHHHHHHHHHhhc
Q psy11066 27 EDIAMAYDISSMPTFVFVKSTAKVEQFSGANFDKLRSTVLANR 69 (70)
Q Consensus 27 ~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~l~~~i~~~~ 69 (70)
..++.++||.++||+++ ||+.+. .|.+.+.+.+.|+..+
T Consensus 145 ~~~a~~~gv~gtPt~vi--ng~~~~--~g~~~~~l~~~i~~~~ 183 (193)
T 2rem_A 145 RAYALKVRPVGTPTIVV--NGRYMV--TGHDFEDTLRITDYLV 183 (193)
T ss_dssp HHHHHHHCCSSSSEEEE--TTTEEE--CCSSHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCCCeEEE--CCEEEe--cCCCHHHHHHHHHHHH
Confidence 45678999999999654 776542 3447778887777643
No 243
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=97.09 E-value=0.001 Score=37.34 Aligned_cols=43 Identities=12% Similarity=0.228 Sum_probs=31.6
Q ss_pred HHHHHH-cCCCccCEEEEEe-CCeEEe-----eeeCC-CHHHHHHHHHhhc
Q psy11066 27 EDIAMA-YDISSMPTFVFVK-STAKVE-----QFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 27 ~~~~~~-~~i~~~Pt~~~~~-~g~~~~-----~~~g~-~~~~l~~~i~~~~ 69 (70)
...+.+ +||+++||++++. ||+.+. ...|+ +.+.|.+.|++.+
T Consensus 160 ~~~a~~~~GV~GtPtfvv~~~nG~~~~Ga~~~~~~G~~~~e~l~~~I~~~l 210 (226)
T 3f4s_A 160 KSLAINKLGITAVPIFFIKLNDDKSYIEHNKVKHGGYKELKYFTNVIDKLY 210 (226)
T ss_dssp HHHHHHHHCCCSSCEEEEEECCTTCCCCGGGGEEESCCCHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCcCCEEEEEcCCCEEeeCCCCcccccccCHHHHHHHHHHHH
Confidence 345677 9999999999864 776542 34556 6999999887754
No 244
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=97.05 E-value=0.0014 Score=35.84 Aligned_cols=37 Identities=16% Similarity=0.204 Sum_probs=29.9
Q ss_pred HHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhh
Q psy11066 27 EDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLAN 68 (70)
Q Consensus 27 ~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~ 68 (70)
...+.++||.++||+++ ||+ .+.|. +.+.|.+.|.+.
T Consensus 157 ~~~a~~~Gv~G~Ptfvi--~g~---~~~G~~~~~~l~~~l~~~ 194 (203)
T 2imf_A 157 THAAIERKVFGVPTMFL--GDE---MWWGNDRLFMLESAMGRL 194 (203)
T ss_dssp HHHHHHTTCCSSSEEEE--TTE---EEESGGGHHHHHHHHHHH
T ss_pred HHHHHHCCCCcCCEEEE--CCE---EEECCCCHHHHHHHHhcc
Confidence 34578899999999987 785 57898 888898888764
No 245
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=96.99 E-value=0.0053 Score=32.83 Aligned_cols=65 Identities=15% Similarity=0.245 Sum_probs=42.8
Q ss_pred HHHHHHHhhCC--CcEEEEEeCcC---------------------cHHHHHHcCCCc------------cCEEEEE-eCC
Q psy11066 4 VMLQELASEFP--DVVFLKVDVDE---------------------SEDIAMAYDISS------------MPTFVFV-KST 47 (70)
Q Consensus 4 p~~~~~~~~~~--~i~~~~vd~~~---------------------~~~~~~~~~i~~------------~Pt~~~~-~~g 47 (70)
|.|.++.+++. ++.++.|..|. ...+++.|++.. .|+++++ ++|
T Consensus 72 ~~l~~l~~~~~~~~~~vv~Vs~D~~~~~~~~~~~~~~~f~~l~D~~~~~~~~~gv~~~~~~~g~~~~~~~p~~~lID~~G 151 (179)
T 3ixr_A 72 LEFNLLLPQFEQINATVLGVSRDSVKSHDSFCAKQGFTFPLVSDSDAILCKAFDVIKEKTMYGRQVIGIERSTFLIGPTH 151 (179)
T ss_dssp HHHHHHHHHHHTTTEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTCHHHHHTTCEEEECCC--CEEEECCEEEEECTTS
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCceEEEECCchHHHHHcCCcccccccCcccCCcceEEEEECCCC
Confidence 55666666663 36666666542 245778888864 6888888 689
Q ss_pred eEEeeeeCC-C---HHHHHHHHHhh
Q psy11066 48 AKVEQFSGA-N---FDKLRSTVLAN 68 (70)
Q Consensus 48 ~~~~~~~g~-~---~~~l~~~i~~~ 68 (70)
+.+..+.+. . .+++.+.|++.
T Consensus 152 ~I~~~~~~~~~~~~~~~il~~l~~l 176 (179)
T 3ixr_A 152 RIVEAWRQVKVPGHAEEVLNKLKAH 176 (179)
T ss_dssp BEEEEECSCCSTTHHHHHHHHHHHH
T ss_pred EEEEEEcCCCCCCCHHHHHHHHHHH
Confidence 998888765 3 34555555543
No 246
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.98 E-value=0.013 Score=31.85 Aligned_cols=54 Identities=15% Similarity=0.310 Sum_probs=40.1
Q ss_pred CcEEEEEeCcCcH---------------HHHHH---cCCCccCEEEEEe-C---CeEEeeeeCC-CHHHHHHHHHhh
Q psy11066 15 DVVFLKVDVDESE---------------DIAMA---YDISSMPTFVFVK-S---TAKVEQFSGA-NFDKLRSTVLAN 68 (70)
Q Consensus 15 ~i~~~~vd~~~~~---------------~~~~~---~~i~~~Pt~~~~~-~---g~~~~~~~g~-~~~~l~~~i~~~ 68 (70)
+..+...|.+... .++.. |++.++|++.++. . .+++.++.|. +.+++.+.|.+.
T Consensus 90 nfV~w~~dv~~~e~~~~~~~~~~~~~g~~~a~~~~~~~~~~~P~l~ii~~~~~~~~vl~~~~G~~~~~~ll~~L~~~ 166 (178)
T 2ec4_A 90 NFITWAWDLTKDSNRARFLTMCNRHFGSVVAQTIRTQKTDQFPLFLIIMGKRSSNEVLNVIQGNTTVDELMMRLMAA 166 (178)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHHHHTCHHHHHHHHHSCSTTCSEEEEECCCSSCCCEEEEECSCCCHHHHHHHHHHH
T ss_pred CEEEEEEeCCCchhhhhhhhhhhhhhHHHHHHHHhhcCCCCCCeEEEEEcCCCceEEEEEEeCCCCHHHHHHHHHHH
Confidence 4667777877543 34444 8999999999993 3 3678999999 998888777643
No 247
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=96.96 E-value=0.00088 Score=33.93 Aligned_cols=50 Identities=6% Similarity=0.084 Sum_probs=33.7
Q ss_pred cEEEEEeCcCcH-------HHHHHcCCCccCEEEEEeCCeEEeeeeC---C-CHHHHHHHHHh
Q psy11066 16 VVFLKVDVDESE-------DIAMAYDISSMPTFVFVKSTAKVEQFSG---A-NFDKLRSTVLA 67 (70)
Q Consensus 16 i~~~~vd~~~~~-------~~~~~~~i~~~Pt~~~~~~g~~~~~~~g---~-~~~~l~~~i~~ 67 (70)
+.+..+|++..+ .+.+.+++.++|++ |.+|+.+..+.- . ....|.++|+.
T Consensus 54 i~~~~vdid~~~~~~~~~~~l~~~~g~~tvP~v--fi~g~~igG~d~l~~l~~~g~L~~~L~~ 114 (118)
T 3c1r_A 54 SKVLVLQLNDMKEGADIQAALYEINGQRTVPNI--YINGKHIGGNDDLQELRETGELEELLEP 114 (118)
T ss_dssp GGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EETTEEEESHHHHHHHHHHTHHHHHHHH
T ss_pred CCeEEEECccCCChHHHHHHHHHHhCCCCcCEE--EECCEEEEcHHHHHHHHHCCcHHHHHHH
Confidence 788888887653 58889999999987 568876543221 1 23456666654
No 248
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=96.94 E-value=0.001 Score=36.00 Aligned_cols=39 Identities=21% Similarity=0.060 Sum_probs=26.3
Q ss_pred HHHHHcCCCccCEEEEEeCCeEEeeeeCC-CH-HHHHHHHHhh
Q psy11066 28 DIAMAYDISSMPTFVFVKSTAKVEQFSGA-NF-DKLRSTVLAN 68 (70)
Q Consensus 28 ~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~-~~l~~~i~~~ 68 (70)
..+.++||.++||+++ ||+.+...... +. +.+.+.|+.+
T Consensus 142 ~~a~~~gv~gtPt~vi--ng~~~~~g~~~~~~~e~~~~~i~~L 182 (195)
T 3hd5_A 142 QLAEAAHIDGTPAFAV--GGRYMTSPVLAGNDYAGALKVVDQL 182 (195)
T ss_dssp HHHHHTTCCSSSEEEE--TTTEEECTTTTTGGGTTHHHHHHHH
T ss_pred HHHHHhCCCcCceEEE--CCEEEeCccccCChHHHHHHHHHHH
Confidence 3567899999999986 77665443333 44 6666666543
No 249
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=96.93 E-value=0.0027 Score=36.84 Aligned_cols=65 Identities=12% Similarity=0.209 Sum_probs=46.5
Q ss_pred hHHHHHHHhhCCC-cEEEEEeCcCcHHHH--HHcC-----C-------------CccCEEEEEeC-CeEEeeeeC-C-CH
Q psy11066 3 LVMLQELASEFPD-VVFLKVDVDESEDIA--MAYD-----I-------------SSMPTFVFVKS-TAKVEQFSG-A-NF 58 (70)
Q Consensus 3 ~p~~~~~~~~~~~-i~~~~vd~~~~~~~~--~~~~-----i-------------~~~Pt~~~~~~-g~~~~~~~g-~-~~ 58 (70)
.+.|.+++..+.+ +.|+.++-.+...+. .+|+ | ...|++++|++ +.....+.| . +.
T Consensus 176 ~~~f~~~A~~~~~~~~F~~v~~~~~a~~~~~~~~~~~~p~i~~~~~~~~~~~~~~~~P~lv~~~~~~~~~~~y~g~~~~~ 255 (298)
T 3ed3_A 176 SPVYKSIALDWLGKFDFYSISNKKLKQLTDMNPTYEKTPEIFKYLQKVIPEQRQSDKSKLVVFDADKDKFWEYEGNSINK 255 (298)
T ss_dssp CHHHHHHHHHTBTTEEEEEEEGGGCCCCCTTCTTSTTCHHHHHHHHHHHHHHTTCSSCEEEEEETTTTEEEECCCSSCCH
T ss_pred hHHHHHHHHHhhcCcEEEEEcchHhhhhhhhhhhcccCcchhhhhhcccccccccCCCeEEEEcCCCCceEEeccccCCH
Confidence 4678999999865 999999865433222 2232 2 67999999974 456666675 5 89
Q ss_pred HHHHHHHHh
Q psy11066 59 DKLRSTVLA 67 (70)
Q Consensus 59 ~~l~~~i~~ 67 (70)
+.|.+||..
T Consensus 256 ~~i~~fi~~ 264 (298)
T 3ed3_A 256 NDISKFLRD 264 (298)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 999999973
No 250
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=96.78 E-value=0.018 Score=30.34 Aligned_cols=41 Identities=15% Similarity=0.145 Sum_probs=29.8
Q ss_pred HHHHHHcCCCc---------cCEEEEE-eCCeEEeeeeC-----C-CHHHHHHHHHhh
Q psy11066 27 EDIAMAYDISS---------MPTFVFV-KSTAKVEQFSG-----A-NFDKLRSTVLAN 68 (70)
Q Consensus 27 ~~~~~~~~i~~---------~Pt~~~~-~~g~~~~~~~g-----~-~~~~l~~~i~~~ 68 (70)
..+ +.|++.. .|+++++ ++|+.+.++.| . +.+++.+.|++.
T Consensus 114 ~~~-~~~gv~~~~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~ll~~l~~l 170 (171)
T 2yzh_A 114 RDM-EKYGVLIGEGALKGILARAVFIIDKEGKVAYVQLVPEITEEPNYDEVVNKVKEL 170 (171)
T ss_dssp CGG-GGGTCBBCSSTTTTSBCCEEEEECTTSBEEEEEECSBTTSCCCCHHHHHHHHHC
T ss_pred CcH-HHhCCEecccccCCceeeEEEEEcCCCeEEEEEeCCCcCCCCCHHHHHHHHHhh
Confidence 445 7777752 6999999 58999988875 2 456788877764
No 251
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=96.78 E-value=0.011 Score=31.39 Aligned_cols=35 Identities=11% Similarity=0.122 Sum_probs=28.2
Q ss_pred CCccCEEEEE-eCCeEEeeeeCC--CHHHHHHHHHhhc
Q psy11066 35 ISSMPTFVFV-KSTAKVEQFSGA--NFDKLRSTVLANR 69 (70)
Q Consensus 35 i~~~Pt~~~~-~~g~~~~~~~g~--~~~~l~~~i~~~~ 69 (70)
+...|+++++ ++|+.+..+.|. +.+++.+.|.+.+
T Consensus 124 ~~~~~~~~lID~~G~i~~~~~g~~~~~~~i~~~l~~~~ 161 (170)
T 3me7_A 124 FIHPNVVVVLSPELQIKDYIYGVNYNYLEFVNALRLAR 161 (170)
T ss_dssp EECCCEEEEECTTSBEEEEEESSSCCHHHHHHHHHHHT
T ss_pred cccCceEEEECCCCeEEEEEeCCCCCHHHHHHHHHHhh
Confidence 4456888888 799999888997 7888998888765
No 252
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=96.77 E-value=0.0038 Score=33.95 Aligned_cols=38 Identities=13% Similarity=0.223 Sum_probs=27.4
Q ss_pred HHHHHHcCCCccCEEEEEeCCeEEeeeeCCCHHHHHHHHHhh
Q psy11066 27 EDIAMAYDISSMPTFVFVKSTAKVEQFSGANFDKLRSTVLAN 68 (70)
Q Consensus 27 ~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~l~~~i~~~ 68 (70)
...+.++||+++||+++ ||+.... |.+.+.+.+.|+..
T Consensus 144 ~~~a~~~gv~gtPt~vv--ng~~~~~--~~~~e~l~~~i~~l 181 (193)
T 3hz8_A 144 QELTETFQIDGVPTVIV--GGKYKVE--FADWESGMNTIDLL 181 (193)
T ss_dssp HHHHHHTTCCSSSEEEE--TTTEEEC--CSSHHHHHHHHHHH
T ss_pred HHHHHHhCCCcCCEEEE--CCEEEec--CCCHHHHHHHHHHH
Confidence 45678999999999986 7865443 22777777776654
No 253
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=96.75 E-value=0.0083 Score=37.50 Aligned_cols=60 Identities=12% Similarity=0.212 Sum_probs=37.0
Q ss_pred HHHHhhC---CCcEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeee-CC-CHHHHHHHHHh
Q psy11066 7 QELASEF---PDVVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFS-GA-NFDKLRSTVLA 67 (70)
Q Consensus 7 ~~~~~~~---~~i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~-g~-~~~~l~~~i~~ 67 (70)
.+++..+ +++.+..++ +.+.+++++|+|+.+||++++.++....+.. .. +...+..++.+
T Consensus 173 ~~~~ldl~~~~~v~v~~v~-~~~~~l~~kfgV~~~Pslvl~~~nGk~~~~~v~~~~r~~~~~~l~~ 237 (519)
T 3t58_A 173 REVTLDLSQYHAVAVRRVL-NTESDLVNKFGVTDFPSCYLLLRNGSVSRVPVLVESRSFYTSYLRG 237 (519)
T ss_dssp HHHHHHTTTCTTEEEEEEE-TTCHHHHHHHTCCCSSEEEEEETTSCEEECCCSSCSHHHHHHHHTT
T ss_pred HHHHHHhhccCCeeEEEec-CchHHHHHHcCCCCCCeEEEEeCCCceeecccccccHHHHHHHHHH
Confidence 4444444 346665554 4468899999999999999996443333333 33 44555555543
No 254
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=96.74 E-value=0.0043 Score=34.98 Aligned_cols=39 Identities=23% Similarity=0.273 Sum_probs=30.1
Q ss_pred HHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 27 EDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 27 ~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
...+.++||.++||+++ ||+ ..+.|. +.+.+.+.|++.+
T Consensus 173 ~~~a~~~Gv~GvPtfvv--~g~--~~v~Ga~~~e~~~~~i~~~~ 212 (239)
T 3gl5_A 173 EREAAQLGATGVPFFVL--DRA--YGVSGAQPAEVFTQALTQAW 212 (239)
T ss_dssp HHHHHHTTCCSSSEEEE--TTT--EEEESSCCHHHHHHHHHHHH
T ss_pred HHHHHHCCCCeeCeEEE--CCc--EeecCCCCHHHHHHHHHHHH
Confidence 34567899999999986 664 234788 9999988887654
No 255
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=96.73 E-value=0.012 Score=30.84 Aligned_cols=42 Identities=10% Similarity=0.067 Sum_probs=30.5
Q ss_pred cHHHHHHcCCCc------cCEEEEE-eCCeEEeeeeCC------CHHHHHHHHHh
Q psy11066 26 SEDIAMAYDISS------MPTFVFV-KSTAKVEQFSGA------NFDKLRSTVLA 67 (70)
Q Consensus 26 ~~~~~~~~~i~~------~Pt~~~~-~~g~~~~~~~g~------~~~~l~~~i~~ 67 (70)
..+++..|++.. .|+++++ ++|+.+.++.+. +.+++.+.|++
T Consensus 111 ~~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~il~~l~~ 165 (166)
T 3p7x_A 111 DLSFGENYGVVMEELRLLARAVFVLDADNKVVYKEIVSEGTDFPDFDAALAAYKN 165 (166)
T ss_dssp TCHHHHHHTCEETTTTEECCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHT
T ss_pred hhHHHHHhCCccccCCceeeEEEEECCCCeEEEEEEcCCcccCCCHHHHHHHHhc
Confidence 347788899885 8999999 689998876543 34566666654
No 256
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=96.70 E-value=0.02 Score=29.90 Aligned_cols=42 Identities=10% Similarity=0.047 Sum_probs=30.3
Q ss_pred cHHHHHHcCCC----c--cCEEEEE-eCCeEEeeeeCC------CHHHHHHHHHh
Q psy11066 26 SEDIAMAYDIS----S--MPTFVFV-KSTAKVEQFSGA------NFDKLRSTVLA 67 (70)
Q Consensus 26 ~~~~~~~~~i~----~--~Pt~~~~-~~g~~~~~~~g~------~~~~l~~~i~~ 67 (70)
...+++.|++. + .|+++++ ++|+.+..+.|. +.+++.+.|++
T Consensus 108 ~~~~~~~~gv~~~~~g~~~p~~~liD~~G~i~~~~~g~~~~~~~~~~~~l~~l~~ 162 (163)
T 1psq_A 108 DHSFGRDYALLINEWHLLARAVFVLDTDNTIRYVEYVDNINSEPNFEAAIAAAKA 162 (163)
T ss_dssp TCHHHHHHTCBCTTTCSBCCEEEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHH
T ss_pred hhHHHHHhCCccccCCceEEEEEEEcCCCeEEEEEecCCcCCCCCHHHHHHHHHh
Confidence 35677888887 3 3999999 689999998774 23567666654
No 257
>3fz5_A Possible 2-hydroxychromene-2-carboxylate isomeras; 2-hydroxychromene-2-carboxylate ISO structural genomics, PSI-2; HET: MSE GSH PGE; 2.40A {Rhodobacter sphaeroides 2}
Probab=96.66 E-value=0.0032 Score=34.49 Aligned_cols=36 Identities=19% Similarity=0.260 Sum_probs=29.2
Q ss_pred HHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHh
Q psy11066 27 EDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLA 67 (70)
Q Consensus 27 ~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~ 67 (70)
...+.++||.++||+++ ||+ .+.|. +.+.|.++|.+
T Consensus 163 ~~~a~~~Gv~GvPtfvv--~g~---~~~G~~~~~~l~~~l~~ 199 (202)
T 3fz5_A 163 GEDAVARGIFGSPFFLV--DDE---PFWGWDRMEMMAEWIRT 199 (202)
T ss_dssp HHHHHHTTCCSSSEEEE--TTE---EEESGGGHHHHHHHHHT
T ss_pred HHHHHHCCCCcCCEEEE--CCE---EEecCCCHHHHHHHHhc
Confidence 34567899999999987 775 67898 88999988865
No 258
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=96.62 E-value=0.0039 Score=33.78 Aligned_cols=40 Identities=13% Similarity=0.149 Sum_probs=26.9
Q ss_pred HHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CH------HHHHHHHHhh
Q psy11066 27 EDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NF------DKLRSTVLAN 68 (70)
Q Consensus 27 ~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~------~~l~~~i~~~ 68 (70)
...+.++||.++||+++ ||+....-.|. +. +.+.+.++.+
T Consensus 135 ~~~a~~~gv~GtPt~~v--ng~~~v~~~~~~~~~~~~~~~~~~~~i~~L 181 (189)
T 3l9v_A 135 ERLFKEYGVRGTPSVYV--RGRYHINNAAFGAFSVENFRSRYAAVVRKL 181 (189)
T ss_dssp HHHHHHTTCCSSSEEEE--TTTEEECGGGCCCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCccCEEEE--CCEEEECccccccccccchHHHHHHHHHHH
Confidence 45678999999999996 78765554444 32 5555555543
No 259
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=96.59 E-value=0.016 Score=32.63 Aligned_cols=41 Identities=12% Similarity=0.172 Sum_probs=30.4
Q ss_pred HHHHHHcCCC------ccCEEEEE-eCCeEEeeeeCC-----CHHHHHHHHHh
Q psy11066 27 EDIAMAYDIS------SMPTFVFV-KSTAKVEQFSGA-----NFDKLRSTVLA 67 (70)
Q Consensus 27 ~~~~~~~~i~------~~Pt~~~~-~~g~~~~~~~g~-----~~~~l~~~i~~ 67 (70)
..+++.|++. .+|+++++ ++|+.+....+. +.+++.+.|+.
T Consensus 151 ~~v~~~ygv~~~~~g~~~p~~flID~~G~I~~~~~~~~~~~~~~~eil~~l~~ 203 (240)
T 3qpm_A 151 HQISKDYGVYLEDQGHTLRGLFIIDEKGVLRQITMNDLPVGRSVDETLRLVQA 203 (240)
T ss_dssp SHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHH
T ss_pred HHHHHHhCCccccCCCccceEEEEcCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 4577889988 78999999 689988887653 34566666654
No 260
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=96.57 E-value=0.026 Score=30.77 Aligned_cols=41 Identities=10% Similarity=0.099 Sum_probs=27.8
Q ss_pred cHHHHHHcCCC---------ccCEEEEE-eCCeEEeeeeCC---CHHHHHHHHH
Q psy11066 26 SEDIAMAYDIS---------SMPTFVFV-KSTAKVEQFSGA---NFDKLRSTVL 66 (70)
Q Consensus 26 ~~~~~~~~~i~---------~~Pt~~~~-~~g~~~~~~~g~---~~~~l~~~i~ 66 (70)
...+++.|++. ..|+++++ ++|+.+.+..+. ...++.+.++
T Consensus 144 ~~~~~~~ygv~~~~~~~~g~~~p~~~lID~~G~I~~~~~~~~~~~~~~~~~~l~ 197 (200)
T 3zrd_A 144 GADFKQAYGVAITEGPLAGLTARAVVVLDGQDNVIYSELVNEITTEPNYDAALA 197 (200)
T ss_dssp CTHHHHHTTCEECSSTTTTSBCCEEEEECTTSBEEEEEECSBTTSCCCHHHHHH
T ss_pred hHHHHHHhCceeecccCCCccccEEEEECCCCeEEEEEecCCcccCCCHHHHHH
Confidence 34667778876 36999999 689998887653 2334554444
No 261
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=96.56 E-value=0.011 Score=32.90 Aligned_cols=30 Identities=13% Similarity=0.106 Sum_probs=22.8
Q ss_pred HHHHHHcCCC-----------ccCEEEEEeCCeEEeeeeCC
Q psy11066 27 EDIAMAYDIS-----------SMPTFVFVKSTAKVEQFSGA 56 (70)
Q Consensus 27 ~~~~~~~~i~-----------~~Pt~~~~~~g~~~~~~~g~ 56 (70)
..+++.|++. +.|+.+++++|+.+..+.|.
T Consensus 103 ~~~~~~~gv~~~~~~~g~~~~~~p~t~li~~G~i~~~~~~~ 143 (241)
T 1nm3_A 103 GEFTEGMGMLVGKEDLGFGKRSWRYSMLVKNGVVEKMFIEP 143 (241)
T ss_dssp SHHHHHTTCEEECTTTTCCEEECCEEEEEETTEEEEEEECC
T ss_pred cHHHHHhCceeecccccCcccceeEEEEEECCEEEEEEEec
Confidence 4577888886 45776666999999888886
No 262
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=96.39 E-value=0.0082 Score=28.43 Aligned_cols=34 Identities=12% Similarity=0.249 Sum_probs=26.2
Q ss_pred CcEEEEEeCc--CcHHHHHHc-CCCccCEEEEEeCCeEE
Q psy11066 15 DVVFLKVDVD--ESEDIAMAY-DISSMPTFVFVKSTAKV 50 (70)
Q Consensus 15 ~i~~~~vd~~--~~~~~~~~~-~i~~~Pt~~~~~~g~~~ 50 (70)
++.+..+|++ ..+++.+.+ ++.++|+++ .+|+.+
T Consensus 30 ~i~~~~vdv~~~~~~~l~~~~~~~~~vP~l~--~~g~~i 66 (89)
T 2klx_A 30 GVKYTDIDASTSLRQEMVQRANGRNTFPQIF--IGDYHV 66 (89)
T ss_dssp TCCEEEECSCHHHHHHHHHHHHSSCCSCEEE--ETTEEC
T ss_pred CCCcEEEECCHHHHHHHHHHhCCCCCcCEEE--ECCEEE
Confidence 3667788887 566788888 999999985 478654
No 263
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=96.39 E-value=0.0034 Score=34.51 Aligned_cols=29 Identities=14% Similarity=0.178 Sum_probs=20.8
Q ss_pred cHHHHHHcCCCccCEEEEEeCCeEEeeeeCC
Q psy11066 26 SEDIAMAYDISSMPTFVFVKSTAKVEQFSGA 56 (70)
Q Consensus 26 ~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~ 56 (70)
....++.+|++++||+++ +|+......+.
T Consensus 39 ~~~~a~~~gi~gvP~fvi--ngk~~~~~~~~ 67 (197)
T 1un2_A 39 QEKAAADVQLRGVPAMFV--NGKYQLNPQGM 67 (197)
T ss_dssp HHHHHHHTTCCSSSEEEE--TTTEEECGGGS
T ss_pred HHHHHHHcCCCcCCEEEE--cceEecCcccc
Confidence 345688999999999975 77765543343
No 264
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=96.35 E-value=0.038 Score=28.94 Aligned_cols=41 Identities=0% Similarity=0.009 Sum_probs=28.8
Q ss_pred cHHHHHHcCCCc---------cCEEEEE-eCCeEEeeeeCC---CHHHHHHHHH
Q psy11066 26 SEDIAMAYDISS---------MPTFVFV-KSTAKVEQFSGA---NFDKLRSTVL 66 (70)
Q Consensus 26 ~~~~~~~~~i~~---------~Pt~~~~-~~g~~~~~~~g~---~~~~l~~~i~ 66 (70)
...+++.|++.. .|+.+++ ++|+.+..+.|. ....+.+.++
T Consensus 109 ~~~~~~~~gv~~~~~~~~g~~~p~~~liD~~G~i~~~~~~~~~~~~~~~~~~l~ 162 (165)
T 1q98_A 109 NHALHSQLGVDIQTGPLAGLTSRAVIVLDEQNNVLHSQLVEEIKEEPNYEAALA 162 (165)
T ss_dssp CTHHHHHTTCEECSSTTTTSBCCEEEEECTTSBEEEEEECSBTTSCCCHHHHHH
T ss_pred cchHHHHhCceecccccCCccceeEEEEcCCCEEEEEEeCCCCCCCCCHHHHHH
Confidence 456788888864 5999999 689999998753 3344555444
No 265
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=96.30 E-value=0.0054 Score=33.40 Aligned_cols=28 Identities=14% Similarity=0.201 Sum_probs=22.5
Q ss_pred HHHHHHcCCCccCEEEEEeCCeEEeeeeCC
Q psy11066 27 EDIAMAYDISSMPTFVFVKSTAKVEQFSGA 56 (70)
Q Consensus 27 ~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~ 56 (70)
...++++||+++||+++ ||+......|.
T Consensus 141 ~~~a~~~gv~gtPtfvv--nG~~~v~~~~~ 168 (191)
T 3l9s_A 141 EKAAADLQLQGVPAMFV--NGKYQINPQGM 168 (191)
T ss_dssp HHHHHHTTCCSSSEEEE--TTTEEECGGGS
T ss_pred HHHHHHhCCcccCEEEE--CCEEEECcccc
Confidence 45678999999999986 78877666666
No 266
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=96.30 E-value=0.0085 Score=29.43 Aligned_cols=35 Identities=17% Similarity=0.233 Sum_probs=25.7
Q ss_pred CcEEEEEeCcCcHH----HHHHcCCCccCEEEEEeCCeEEe
Q psy11066 15 DVVFLKVDVDESED----IAMAYDISSMPTFVFVKSTAKVE 51 (70)
Q Consensus 15 ~i~~~~vd~~~~~~----~~~~~~i~~~Pt~~~~~~g~~~~ 51 (70)
++.|..+|++++++ +.+.+++.++|++ |.+|+.+.
T Consensus 46 ~i~~~~vdi~~~~~~~~~l~~~~g~~~vP~v--~i~g~~ig 84 (105)
T 2yan_A 46 GVEYETFDILEDEEVRQGLKAYSNWPTYPQL--YVKGELVG 84 (105)
T ss_dssp TCCCEEEEGGGCHHHHHHHHHHHTCCSSCEE--EETTEEEE
T ss_pred CCCeEEEECCCCHHHHHHHHHHHCCCCCCeE--EECCEEEe
Confidence 36778888887765 4556799999998 45887554
No 267
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=96.29 E-value=0.011 Score=31.80 Aligned_cols=42 Identities=12% Similarity=-0.002 Sum_probs=31.6
Q ss_pred HHHHHHcCCC------ccCEEEEE-eCCeEEeeeeCC-----CHHHHHHHHHhh
Q psy11066 27 EDIAMAYDIS------SMPTFVFV-KSTAKVEQFSGA-----NFDKLRSTVLAN 68 (70)
Q Consensus 27 ~~~~~~~~i~------~~Pt~~~~-~~g~~~~~~~g~-----~~~~l~~~i~~~ 68 (70)
..+++.|++. ..|+++++ ++|+.+..+.|. +.+++.+.|+++
T Consensus 101 ~~~~~~ygv~~~~~g~~~p~~~lID~~G~i~~~~~~~~~~~~~~~~l~~~l~~l 154 (186)
T 1n8j_A 101 GALTRNFDNMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAA 154 (186)
T ss_dssp SHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred hHHHHHhCCccCCCCceeeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 4567788887 37999999 689999888774 366777777654
No 268
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=96.27 E-value=0.011 Score=32.92 Aligned_cols=42 Identities=17% Similarity=0.262 Sum_probs=32.2
Q ss_pred HHHHHHcCC-----CccCEEEEE-eCCeEEeeeeCC-----CHHHHHHHHHhh
Q psy11066 27 EDIAMAYDI-----SSMPTFVFV-KSTAKVEQFSGA-----NFDKLRSTVLAN 68 (70)
Q Consensus 27 ~~~~~~~~i-----~~~Pt~~~~-~~g~~~~~~~g~-----~~~~l~~~i~~~ 68 (70)
..+++.|++ ..+|+++++ ++|+.+....|. +.+++.+.|++.
T Consensus 130 ~~~~~~ygv~~~~g~~~P~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~L 182 (221)
T 2c0d_A 130 KDISKNYNVLYDNSFALRGLFIIDKNGCVRHQTVNDLPIGRNVQEVLRTIDSI 182 (221)
T ss_dssp SHHHHHTTCEETTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHHH
T ss_pred hHHHHHcCCcccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 457788998 479999999 689998888763 467777777654
No 269
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=96.17 E-value=0.0021 Score=31.59 Aligned_cols=35 Identities=17% Similarity=0.253 Sum_probs=24.7
Q ss_pred CcEEEEEeCcCcHHHHHHc-----CCCccCEEEEEeCCeEEe
Q psy11066 15 DVVFLKVDVDESEDIAMAY-----DISSMPTFVFVKSTAKVE 51 (70)
Q Consensus 15 ~i~~~~vd~~~~~~~~~~~-----~i~~~Pt~~~~~~g~~~~ 51 (70)
++.+..+|++..++..+.+ +..++|++ |.+|+.+.
T Consensus 40 ~i~y~~idI~~~~~~~~~l~~~~~g~~~vP~i--fi~g~~ig 79 (99)
T 3qmx_A 40 GVEFQEYCIDGDNEAREAMAARANGKRSLPQI--FIDDQHIG 79 (99)
T ss_dssp TCCCEEEECTTCHHHHHHHHHHTTTCCCSCEE--EETTEEEE
T ss_pred CCCCEEEEcCCCHHHHHHHHHHhCCCCCCCEE--EECCEEEe
Confidence 3667788888776655444 89999987 45886543
No 270
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=96.11 E-value=0.021 Score=31.63 Aligned_cols=40 Identities=18% Similarity=0.130 Sum_probs=30.1
Q ss_pred HHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHh
Q psy11066 27 EDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLA 67 (70)
Q Consensus 27 ~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~ 67 (70)
...+.++||.++||+++=.+|+ -..+.|. +.+.+.+.|.+
T Consensus 172 ~~~a~~~gv~G~Ptfvv~~~g~-~~~~~G~~~~~~l~~~l~~ 212 (226)
T 1r4w_A 172 TGAACKYGAFGLPTTVAHVDGK-TYMLFGSDRMELLAYLLGE 212 (226)
T ss_dssp HHHHHHTTCCSSCEEEEEETTE-EEEEESTTCHHHHHHHHTC
T ss_pred HHHHHHCCCCCCCEEEEeCCCC-cCceeCCCcHHHHHHHhcC
Confidence 3457889999999997755553 2367798 88888888864
No 271
>1t4y_A Adaptive-response sensory-kinase SASA; alpha/beta protein, thioredoxin fold, transferase; NMR {Synechococcus elongatus} SCOP: c.47.1.15 PDB: 1t4z_A
Probab=95.95 E-value=0.056 Score=27.15 Aligned_cols=51 Identities=16% Similarity=0.294 Sum_probs=42.8
Q ss_pred cEEEEEeCcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHh
Q psy11066 16 VVFLKVDVDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLA 67 (70)
Q Consensus 16 i~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~ 67 (70)
..+-.+|+.+.+++++.++|-++||++=.- -..+.++.|. =.++|+.|.-+
T Consensus 45 y~LeVIDv~eqPeLAE~~~IvATPTLIK~~-P~P~rriiGd~i~~ql~~wwpr 96 (105)
T 1t4y_A 45 ISLQVINVADQPQLVEYYRLVVTPALVKIG-PGSRQVLSGIDLTDQLANQLPQ 96 (105)
T ss_dssp EEEEEEETTTCHHHHHHTTCCSSSEEEEEE-SSSCEEEESSCHHHHHHHHHHH
T ss_pred eEEEEeecccCHHHHhHcCeeeccHhhccC-CCCceEEeChHHHHHHHHHhHH
Confidence 888899999999999999999999988543 3578889998 46788888754
No 272
>3ktb_A Arsenical resistance operon trans-acting represso; alpha-beta-alpha sandwich, helix-turn-helix, structural GENO PSI-2; 2.10A {Bacteroides vulgatus}
Probab=95.87 E-value=0.062 Score=27.06 Aligned_cols=50 Identities=4% Similarity=0.044 Sum_probs=37.7
Q ss_pred CCcEEEEEeCcCcH----------HHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHH
Q psy11066 14 PDVVFLKVDVDESE----------DIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVL 66 (70)
Q Consensus 14 ~~i~~~~vd~~~~~----------~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~ 66 (70)
.++.+.+.|...++ ++.+++|+.++|.++ -||+.+..- .+ +.++|.+|+.
T Consensus 42 ~Gi~V~RyNL~~~P~~F~~N~~V~~~L~~~G~~~LP~~~--VDGevv~~G-~yPt~eEl~~~lg 102 (106)
T 3ktb_A 42 QGIIVTRHNLRDEPQVYVSNKTVNDFLQKHGADALPITL--VDGEIAVSQ-TYPTTKQMSEWTG 102 (106)
T ss_dssp TTCCCEEEETTTCTTHHHHSHHHHHHHHTTCGGGCSEEE--ETTEEEECS-SCCCHHHHHHHHC
T ss_pred CCCEEEEEccccChHHHhcCHHHHHHHHHcCcccCCEEE--ECCEEEEec-cCCCHHHHHHHhC
Confidence 35778888877655 566789999999877 588766553 34 8999998874
No 273
>3kgk_A Arsenical resistance operon trans-acting represso; alpha+beta, chaperone, DNA-binding, RE transcription, transcription regulation; 1.40A {Escherichia coli} PDB: 3mwh_A
Probab=95.74 E-value=0.074 Score=26.95 Aligned_cols=49 Identities=10% Similarity=0.026 Sum_probs=37.9
Q ss_pred CcEEEEEeCcCcH----------HHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHH
Q psy11066 15 DVVFLKVDVDESE----------DIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVL 66 (70)
Q Consensus 15 ~i~~~~vd~~~~~----------~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~ 66 (70)
++.+.+.|...++ ++.+++|+.++|.++ -||+.+..- .+ +.++|.+|+.
T Consensus 40 Gi~V~RyNL~~~P~aF~~N~~V~~~L~~~G~~~LP~~~--VDGevv~~G-~yPt~eEl~~~lg 99 (110)
T 3kgk_A 40 GVQIERFNLAQQPMSFVQNEKVKAFIEASGAEGLPLLL--LDGETVMAG-RYPKRAELARWFG 99 (110)
T ss_dssp TCCEEEEETTTCTTHHHHSHHHHHHHHHHCGGGCCEEE--ETTEEEEES-SCCCHHHHHHHHT
T ss_pred CCeEEEEccccChHHHhcCHHHHHHHHHcCcccCCEEE--ECCEEEEec-cCCCHHHHHHHhC
Confidence 5888888887665 567889999999877 588766554 34 8999999874
No 274
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=95.68 E-value=0.022 Score=31.36 Aligned_cols=42 Identities=12% Similarity=0.125 Sum_probs=31.4
Q ss_pred HHHHHHcCCC------ccCEEEEE-eCCeEEeeeeCC-----CHHHHHHHHHhh
Q psy11066 27 EDIAMAYDIS------SMPTFVFV-KSTAKVEQFSGA-----NFDKLRSTVLAN 68 (70)
Q Consensus 27 ~~~~~~~~i~------~~Pt~~~~-~~g~~~~~~~g~-----~~~~l~~~i~~~ 68 (70)
..+++.|++. .+|+++++ ++|+.+....|. +.+++.+.|+.+
T Consensus 122 ~~~~~~ygv~~~~~g~~~p~~~lID~~G~I~~~~~g~~~~~~~~~ell~~l~~l 175 (211)
T 2pn8_A 122 HQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAF 175 (211)
T ss_dssp SHHHHHTTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred hHHHHHcCCcccCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 4577888884 69999999 689998887664 346677776654
No 275
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=95.61 E-value=0.037 Score=28.90 Aligned_cols=43 Identities=9% Similarity=0.272 Sum_probs=30.0
Q ss_pred cHHHHHHcCCC-----------ccCEEEEE-eCCeEEeeeeCC------CHHHHHHHHHhh
Q psy11066 26 SEDIAMAYDIS-----------SMPTFVFV-KSTAKVEQFSGA------NFDKLRSTVLAN 68 (70)
Q Consensus 26 ~~~~~~~~~i~-----------~~Pt~~~~-~~g~~~~~~~g~------~~~~l~~~i~~~ 68 (70)
..++++.||+. ..|+++++ ++|+.+.++.|. +.+++.+.|+.+
T Consensus 96 ~~~v~~~ygv~~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~L 156 (157)
T 4g2e_A 96 NREVVKKYNVAWEFPALPGYVLAKRAVFVIDKEGKVRYKWVSDDPTKEPPYDEIEKVVKSL 156 (157)
T ss_dssp TSHHHHHTTCEEECTTSTTCEEECEEEEEECTTSBEEEEEEESSTTCCCCHHHHHHHHHHT
T ss_pred CcHHHHHcCCccccccCCCcceeeeeEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHh
Confidence 35677888874 46788888 689888776542 456777777654
No 276
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=95.61 E-value=0.027 Score=31.32 Aligned_cols=31 Identities=16% Similarity=0.169 Sum_probs=26.5
Q ss_pred CEEEEE-eCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 39 PTFVFV-KSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 39 Pt~~~~-~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
||.+++ ++|+.+.++.|. +.++|.+.|++.+
T Consensus 178 pttfLID~~G~vv~~~~g~~~~~~l~~~I~~ll 210 (215)
T 2i3y_A 178 FEKFLVGPDGIPVMRWSHRATVSSVKTDILAYL 210 (215)
T ss_dssp TCEEEECTTSCEEEEECTTSCHHHHHHHHHHHG
T ss_pred ceEEEECCCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence 787777 799999999998 8888988888765
No 277
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=95.42 E-value=0.034 Score=30.62 Aligned_cols=31 Identities=6% Similarity=0.108 Sum_probs=25.8
Q ss_pred CEEEEE-eCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 39 PTFVFV-KSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 39 Pt~~~~-~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
||.+++ ++|+.+.++.|. +.+.|.+.|++.+
T Consensus 160 ~ttflID~~G~i~~~~~g~~~~~~l~~~I~~ll 192 (207)
T 2r37_A 160 FEKFLVGPDGIPIMRWHHRTTVSNVKMDILSYM 192 (207)
T ss_dssp TCEEEECTTSCEEEEECTTSCHHHHHHHHHHHH
T ss_pred ceEEEECCCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 787777 799999999998 8888888887654
No 278
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=95.31 E-value=0.061 Score=24.61 Aligned_cols=34 Identities=12% Similarity=0.316 Sum_probs=23.7
Q ss_pred CcEEEEEeCcCcH----HHHHHcCCCccCEEEEEeCCeEE
Q psy11066 15 DVVFLKVDVDESE----DIAMAYDISSMPTFVFVKSTAKV 50 (70)
Q Consensus 15 ~i~~~~vd~~~~~----~~~~~~~i~~~Pt~~~~~~g~~~ 50 (70)
++.+..+|+++.+ ++.+.+++.++|+++ .+|+.+
T Consensus 25 ~i~~~~~~i~~~~~~~~~~~~~~~~~~vP~l~--~~g~~i 62 (82)
T 1fov_A 25 GVSFQELPIDGNAAKREEMIKRSGRTTVPQIF--IDAQHI 62 (82)
T ss_dssp TCCCEEEECTTCSHHHHHHHHHHSSCCSCEEE--ETTEEE
T ss_pred CCCcEEEECCCCHHHHHHHHHHhCCCCcCEEE--ECCEEE
Confidence 3566677776543 356788999999984 488654
No 279
>3rpp_A Glutathione S-transferase kappa 1; glutathione transferase, kappa GST, TRX domain, GSH binding, detoxification, APO form; 1.80A {Homo sapiens} PDB: 3rpn_A 1yzx_A*
Probab=95.23 E-value=0.059 Score=30.20 Aligned_cols=40 Identities=15% Similarity=0.166 Sum_probs=29.9
Q ss_pred HHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHh
Q psy11066 27 EDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLA 67 (70)
Q Consensus 27 ~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~ 67 (70)
...+.++||.++||+++=.+|+ -..+.|. ..+.+.++|.+
T Consensus 172 ~~~a~~~Gv~GvPtfvv~~~g~-~~~f~G~drl~~l~~~L~~ 212 (234)
T 3rpp_A 172 TEAACRYGAFGLPITVAHVDGQ-THMLFGSDRMELLAHLLGE 212 (234)
T ss_dssp HHHHHHTTCSSSCEEEEEETTE-EEEEESSSCHHHHHHHHTC
T ss_pred HHHHHHcCCCCCCEEEEeCCCC-cCceeCccCHHHHHHHhcc
Confidence 3456789999999998733674 2457788 88888888854
No 280
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=94.86 E-value=0.064 Score=25.27 Aligned_cols=35 Identities=11% Similarity=0.258 Sum_probs=24.5
Q ss_pred CcEEEEEeCcCcHH----HHHHcCCCccCEEEEEeCCeEEe
Q psy11066 15 DVVFLKVDVDESED----IAMAYDISSMPTFVFVKSTAKVE 51 (70)
Q Consensus 15 ~i~~~~vd~~~~~~----~~~~~~i~~~Pt~~~~~~g~~~~ 51 (70)
++.+..+|+++++. +.+.+++.++|++ +.+|+.+.
T Consensus 30 ~i~~~~~di~~~~~~~~~l~~~~~~~~vP~l--~~~g~~i~ 68 (92)
T 2khp_A 30 GAEFNEIDASATPELRAEMQERSGRNTFPQI--FIGSVHVG 68 (92)
T ss_dssp TCCCEEEESTTSHHHHHHHHHHHTSSCCCEE--EETTEEEE
T ss_pred CCCcEEEECCCCHHHHHHHHHHhCCCCcCEE--EECCEEEc
Confidence 47777888876544 4457899999975 45886543
No 281
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=94.79 E-value=0.13 Score=27.10 Aligned_cols=45 Identities=9% Similarity=0.189 Sum_probs=30.7
Q ss_pred cCcHHHHHHcCCC----------ccCEEEEE-eCCeEEeeeeCC------CHHHHHHHHHhh
Q psy11066 24 DESEDIAMAYDIS----------SMPTFVFV-KSTAKVEQFSGA------NFDKLRSTVLAN 68 (70)
Q Consensus 24 ~~~~~~~~~~~i~----------~~Pt~~~~-~~g~~~~~~~g~------~~~~l~~~i~~~ 68 (70)
|...++++.||+. ..|+++++ ++|+.+..+.+. +.+++.+.++++
T Consensus 97 D~~~~v~~~ygv~~~~~~~~~~~~~p~tflID~~G~I~~~~~~~~~~~~~~~~eil~~l~~l 158 (164)
T 4gqc_A 97 DYNREVIKLYNVYHEDLKGLKMVAKRAVFIVKPDGTVAYKWVTDNPLNEPDYDEVVREANKI 158 (164)
T ss_dssp CTTSHHHHHTTCEEEEETTEEEEECCEEEEECTTSBEEEEEECSCTTCCCCHHHHHHHHHHH
T ss_pred cCchHHHHHcCCcccccccCcCCeeeEEEEECCCCEEEEEEEeCCCCCCCCHHHHHHHHHHH
Confidence 3445678889884 47888888 689988776543 355666666554
No 282
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=94.63 E-value=0.16 Score=24.60 Aligned_cols=32 Identities=16% Similarity=0.179 Sum_probs=21.9
Q ss_pred HHcCCCccCEEEEEeCCeEEeeeeCCCHHHHHHHHH
Q psy11066 31 MAYDISSMPTFVFVKSTAKVEQFSGANFDKLRSTVL 66 (70)
Q Consensus 31 ~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~l~~~i~ 66 (70)
+.++..++|++++ .+|+ .+.|++.+.|.++|.
T Consensus 71 ~~~g~~~vP~l~i-~~~~---~igg~~~~~l~~~L~ 102 (103)
T 3nzn_A 71 RFNPSVSFPTTII-NDEK---AIVGFKEKEIRESLG 102 (103)
T ss_dssp HHCTTCCSCEEEE-TTTE---EEESCCHHHHHHHTT
T ss_pred HhCCCCccCEEEE-CCCE---EEEcCCHHHHHHHhC
Confidence 3468999999875 2333 344668888888763
No 283
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=94.60 E-value=0.078 Score=30.16 Aligned_cols=41 Identities=12% Similarity=0.153 Sum_probs=29.5
Q ss_pred HHHHHHcCCC------ccCEEEEE-eCCeEEeeeeCC-----CHHHHHHHHHh
Q psy11066 27 EDIAMAYDIS------SMPTFVFV-KSTAKVEQFSGA-----NFDKLRSTVLA 67 (70)
Q Consensus 27 ~~~~~~~~i~------~~Pt~~~~-~~g~~~~~~~g~-----~~~~l~~~i~~ 67 (70)
..+++.|++. .+|+++++ ++|+.+..+.+. +.+++.+.|+.
T Consensus 165 ~~va~~ygv~~~~~g~~~p~tflID~~G~I~~~~~~~~~~~~~~~eil~~L~a 217 (254)
T 3tjj_A 165 HQISKDYGVYLEDSGHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQA 217 (254)
T ss_dssp SHHHHHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTCCCCHHHHHHHHHH
T ss_pred HHHHHHcCCccccCCCccceEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHh
Confidence 4577888886 58999988 689988887752 35666666654
No 284
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=94.41 E-value=0.21 Score=27.76 Aligned_cols=42 Identities=12% Similarity=0.162 Sum_probs=30.7
Q ss_pred HHHHHHcCCC------------ccCEEEEE-eCCeEEeeeeCC-----CHHHHHHHHHhh
Q psy11066 27 EDIAMAYDIS------------SMPTFVFV-KSTAKVEQFSGA-----NFDKLRSTVLAN 68 (70)
Q Consensus 27 ~~~~~~~~i~------------~~Pt~~~~-~~g~~~~~~~g~-----~~~~l~~~i~~~ 68 (70)
..+++.|++. .+|+++++ ++|+.+..+.|. +.+++...|+.+
T Consensus 108 ~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~~eil~~i~~l 167 (224)
T 1prx_A 108 RELAILLGMLDPAEKDEKGMPVTARVVFVFGPDKKLKLSILYPATTGRNFDEILRVVISL 167 (224)
T ss_dssp CHHHHHTTSSCSCTTCSSSCCTTCCEEEEECTTSBEEEEEECCTTBCCCHHHHHHHHHHH
T ss_pred hHHHHHhCCCCcccccCCCccccceEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 4567788874 47999999 689988887653 567777777654
No 285
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=94.36 E-value=0.12 Score=29.06 Aligned_cols=43 Identities=7% Similarity=0.124 Sum_probs=31.4
Q ss_pred cHHHHHHcCCC------------ccCEEEEE-eCCeEEeeeeCC-----CHHHHHHHHHhh
Q psy11066 26 SEDIAMAYDIS------------SMPTFVFV-KSTAKVEQFSGA-----NFDKLRSTVLAN 68 (70)
Q Consensus 26 ~~~~~~~~~i~------------~~Pt~~~~-~~g~~~~~~~g~-----~~~~l~~~i~~~ 68 (70)
...+++.|++. .+|+++++ ++|+.+..+.+. +.+++...|+.+
T Consensus 103 ~~~va~~ygv~~~~~~~~~g~~~~~p~~fiID~~G~I~~~~~~~~~~gr~~~eilr~l~~L 163 (233)
T 2v2g_A 103 TRELAVKLGMVDPDERTSTGMPLTCRAVFIIGPDKKLKLSILYPATTGRNFSEILRVIDSL 163 (233)
T ss_dssp TCHHHHHTTCEEEEEECTTCCEEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred hHHHHHHhCCcCcccccCCCcccccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 35677888875 58999999 689888877542 467777777654
No 286
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=94.20 E-value=0.18 Score=23.31 Aligned_cols=33 Identities=12% Similarity=0.040 Sum_probs=22.6
Q ss_pred cEEEEEeCcCc----HHHHHHcCC-----CccCEEEEEeCCeEE
Q psy11066 16 VVFLKVDVDES----EDIAMAYDI-----SSMPTFVFVKSTAKV 50 (70)
Q Consensus 16 i~~~~vd~~~~----~~~~~~~~i-----~~~Pt~~~~~~g~~~ 50 (70)
..+..+|.++. +++.+.++. .++|++++ +|+.+
T Consensus 31 ~~~~~vd~~~~~~~~~el~~~~g~~~~~~~~vP~i~i--~g~~i 72 (89)
T 3msz_A 31 FDETIIDDYAQRSKFYDEMNQSGKVIFPISTVPQIFI--DDEHI 72 (89)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTTCCSSCCCSSCEEEE--TTEEE
T ss_pred ceEEEeecCCChhHHHHHHHHhCCCCCCCCccCEEEE--CCEEE
Confidence 45555665544 457777888 99999864 78644
No 287
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=94.17 E-value=0.13 Score=27.81 Aligned_cols=41 Identities=7% Similarity=-0.073 Sum_probs=28.0
Q ss_pred HHHHHHcCCC-----------ccCEEEEEeCCeEEeeeeCC-----CHHHHHHHHHh
Q psy11066 27 EDIAMAYDIS-----------SMPTFVFVKSTAKVEQFSGA-----NFDKLRSTVLA 67 (70)
Q Consensus 27 ~~~~~~~~i~-----------~~Pt~~~~~~g~~~~~~~g~-----~~~~l~~~i~~ 67 (70)
..+++.|++. +.|+.+++++|+.+....|. +...+++.|++
T Consensus 127 ~~va~~yGv~~~~~~~g~g~~~~r~tfiIddG~I~~~~~~~~~g~~~~~~~~~vL~~ 183 (184)
T 3uma_A 127 AAFTKAIGMEIDLSAGTLGIRSKRYSMLVEDGVVKALNIEESPGQATASGAAAMLEL 183 (184)
T ss_dssp CHHHHHTTCEEEEGGGTCEEEECCEEEEEETTEEEEEEECSSTTCCSTTSHHHHHHH
T ss_pred hHHHHHcCCceeccccCCcccceeEEEEECCCEEEEEEEeCCCCCCcCCCHHHHHhh
Confidence 3567788875 35777777999998888764 23556665553
No 288
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=94.06 E-value=0.14 Score=30.18 Aligned_cols=44 Identities=0% Similarity=0.040 Sum_probs=31.5
Q ss_pred CcHHHHHHcCCC----ccCEEEEE-eCCeEEeeeeCC-C---HHHHHHHHHhh
Q psy11066 25 ESEDIAMAYDIS----SMPTFVFV-KSTAKVEQFSGA-N---FDKLRSTVLAN 68 (70)
Q Consensus 25 ~~~~~~~~~~i~----~~Pt~~~~-~~g~~~~~~~g~-~---~~~l~~~i~~~ 68 (70)
....+++.||+. .+|+.+++ ++|+....+.+. . .+++.++++++
T Consensus 85 ~~~~v~~~ygv~~~~~~~r~tfiId~~G~i~~~~~~v~~~~h~~~~l~~~~~~ 137 (322)
T 4eo3_A 85 PEGILHEFFNVLENGKTVRSTFLIDRWGFVRKEWRRVKVEGHVQEVKEALDRL 137 (322)
T ss_dssp TTCHHHHHTTCEETTEECCEEEEECTTSBEEEEEESCCSTTHHHHHHHHHHHH
T ss_pred CchHHHHhcCCCCCCcCccEEEEECCCCEEEEEEeCCCccccHHHHHHHHhhh
Confidence 345688999994 57888888 789888777765 3 45666666654
No 289
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=94.02 E-value=0.15 Score=28.26 Aligned_cols=42 Identities=10% Similarity=0.085 Sum_probs=30.9
Q ss_pred HHHHHHcCCC------------ccCEEEEE-eCCeEEeeeeC-----CCHHHHHHHHHhh
Q psy11066 27 EDIAMAYDIS------------SMPTFVFV-KSTAKVEQFSG-----ANFDKLRSTVLAN 68 (70)
Q Consensus 27 ~~~~~~~~i~------------~~Pt~~~~-~~g~~~~~~~g-----~~~~~l~~~i~~~ 68 (70)
..+++.|++. .+|+++++ ++|+.+..+.| .+.+++...|+..
T Consensus 105 ~~va~~ygv~~~~~~~~~g~~~~~p~~flID~~G~I~~~~~~~~~~g~~~~ell~~i~~l 164 (220)
T 1xcc_A 105 RELANKLKIMDEQEKDITGLPLTCRCLFFISPEKKIKATVLYPATTGRNAHEILRVLKSL 164 (220)
T ss_dssp SHHHHHHTCEEEEEECTTSCEEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred hHHHHHhCCCCcccccCCCCCcccceEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 4577888873 47999999 68988887754 3577787777654
No 290
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=93.80 E-value=0.13 Score=27.18 Aligned_cols=31 Identities=6% Similarity=-0.034 Sum_probs=23.1
Q ss_pred cHHHHHHcCCCcc-----------CEEEEEeCCeEEeeeeCC
Q psy11066 26 SEDIAMAYDISSM-----------PTFVFVKSTAKVEQFSGA 56 (70)
Q Consensus 26 ~~~~~~~~~i~~~-----------Pt~~~~~~g~~~~~~~g~ 56 (70)
...+++.|++... |+.+++++|+.+....+.
T Consensus 101 ~~~~~~~~gv~~~~~~~~g~~~~~p~t~lI~~G~I~~~~~~~ 142 (167)
T 2wfc_A 101 GGAFTKAVDMELDLSAVLGNVRSKRYSLVIEDGVVTKVNVEP 142 (167)
T ss_dssp TSHHHHHTTCEECCHHHHSSCEECCEEEEEETTEEEEEEECT
T ss_pred CCcHHHHcCCccccccccCcccceEEEEEEeCCEEEEEEecC
Confidence 3457788888754 886666999998887764
No 291
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=93.72 E-value=0.042 Score=28.13 Aligned_cols=34 Identities=12% Similarity=0.195 Sum_probs=23.9
Q ss_pred cEEEEEeCcCc-------HHHHHHcCCCccCEEEEEeCCeEEe
Q psy11066 16 VVFLKVDVDES-------EDIAMAYDISSMPTFVFVKSTAKVE 51 (70)
Q Consensus 16 i~~~~vd~~~~-------~~~~~~~~i~~~Pt~~~~~~g~~~~ 51 (70)
+.+..+|++.. +.+.+.++..++|++ |.+|+.+.
T Consensus 66 i~~~~vdvd~~~~~~~~~~~L~~~~g~~tVP~v--fi~g~~ig 106 (129)
T 3ctg_A 66 SKALVLELDEMSNGSEIQDALEEISGQKTVPNV--YINGKHIG 106 (129)
T ss_dssp GGEEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EETTEEEE
T ss_pred CCcEEEEccccCCHHHHHHHHHHHhCCCCCCEE--EECCEEEc
Confidence 55666666543 357888999999996 46887553
No 292
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=93.48 E-value=0.16 Score=26.46 Aligned_cols=32 Identities=13% Similarity=-0.015 Sum_probs=25.1
Q ss_pred CcHHHHHHcCCC-----------ccCEEEEEeCCeEEeeeeCC
Q psy11066 25 ESEDIAMAYDIS-----------SMPTFVFVKSTAKVEQFSGA 56 (70)
Q Consensus 25 ~~~~~~~~~~i~-----------~~Pt~~~~~~g~~~~~~~g~ 56 (70)
....+++.|++. ..|+.+++.+|+.+..+.|.
T Consensus 104 ~~~~~~~~~gv~~~~~~~g~~~~~~p~~~vid~G~i~~~~~~~ 146 (162)
T 1tp9_A 104 GSATYTHALGLELDLQEKGLGTRSRRFALLVDDLKVKAANIEG 146 (162)
T ss_dssp TTSHHHHHTTCEEEETTTTSEEEECCEEEEEETTEEEEEEECS
T ss_pred CCchHHHHcCcccccccCCCCccceeEEEEEECCEEEEEEeeC
Confidence 345678899987 38998888899988877765
No 293
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=92.92 E-value=0.37 Score=25.40 Aligned_cols=32 Identities=9% Similarity=0.299 Sum_probs=23.9
Q ss_pred cCEEEEE-eCCeEEeeeeCC---CHHHHHHHHHhhc
Q psy11066 38 MPTFVFV-KSTAKVEQFSGA---NFDKLRSTVLANR 69 (70)
Q Consensus 38 ~Pt~~~~-~~g~~~~~~~g~---~~~~l~~~i~~~~ 69 (70)
.|+++++ ++|+.+..+.|. +.+.+.+-|++++
T Consensus 134 ~~~~~liD~~G~i~~~~~g~~~~~~~~l~~~ik~Ll 169 (170)
T 4hde_A 134 GTSFYLIDQNGKVMKKYSGISNTPYEDIIRDMKRLA 169 (170)
T ss_dssp CCEEEEECTTSCEEEEEESSSSCCHHHHHHHHHHHH
T ss_pred eeEEEEEcCCCeEEEEECCCCCCCHHHHHHHHHHHh
Confidence 4677777 789999999885 3567777777654
No 294
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=92.36 E-value=0.39 Score=25.64 Aligned_cols=40 Identities=5% Similarity=-0.114 Sum_probs=28.4
Q ss_pred HHHHHHcCCC-------------ccCEEEEEeCCeEEeeeeCC-----CHHHHHHHHH
Q psy11066 27 EDIAMAYDIS-------------SMPTFVFVKSTAKVEQFSGA-----NFDKLRSTVL 66 (70)
Q Consensus 27 ~~~~~~~~i~-------------~~Pt~~~~~~g~~~~~~~g~-----~~~~l~~~i~ 66 (70)
.++++.||+. ..|+.+++.+|+......+. +..+....|+
T Consensus 114 ~~va~~yGv~~~~~~~~~~g~~~~~r~tfvIDdG~I~~~~v~~~~~g~~~~~~~~vl~ 171 (173)
T 3mng_A 114 GAFGKETDLLLDDSLVSIFGNRRLKRFSMVVQDGIVKALNVEPDGTGLTCSLAPNIIS 171 (173)
T ss_dssp CHHHHHHTCBCCSTTHHHHSSCCBCCEEEEEETTEEEEEEECTTSSCSSTTSHHHHHH
T ss_pred hHHHHHhCCCcccccccccCCcceEEEEEEEECCEEEEEEEeCCCCCcchHHHHHHHH
Confidence 4678888876 45998888999988887764 2445555554
No 295
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=91.72 E-value=0.96 Score=25.42 Aligned_cols=43 Identities=12% Similarity=0.189 Sum_probs=30.9
Q ss_pred cHHHHHHcCCCc---------cCEEEEE-eCCeEEeeeeC-----C-CHHHHHHHHHhh
Q psy11066 26 SEDIAMAYDISS---------MPTFVFV-KSTAKVEQFSG-----A-NFDKLRSTVLAN 68 (70)
Q Consensus 26 ~~~~~~~~~i~~---------~Pt~~~~-~~g~~~~~~~g-----~-~~~~l~~~i~~~ 68 (70)
...+++.||+.. .|+++++ ++|+.+..... . +.+.+.+.|+..
T Consensus 116 ~~~vak~yGv~~~~~~~~G~~~p~tfvID~dG~I~~~~~~~~~~~~pd~~evl~~L~~l 174 (224)
T 3keb_A 116 GRDFHKRYGVLITEYPLSGYTSPAIILADAANVVHYSERLANTRDFFDFDAIEKLLQEG 174 (224)
T ss_dssp CTTHHHHTTCBCCSTTSTTCBCCEEEEECTTCBEEEEEECSBTTCCCCHHHHHHHHHHH
T ss_pred chHHHHHhCCccccccccCCccCEEEEEcCCCEEEEEEecCCCCCCCCHHHHHHHHHHh
Confidence 367889999875 7999999 58988876543 2 466676666543
No 296
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=90.68 E-value=0.66 Score=22.64 Aligned_cols=35 Identities=17% Similarity=0.227 Sum_probs=25.2
Q ss_pred CcEEEEEeCcCcHH----HHHHcCCCccCEEEEEeCCeEEe
Q psy11066 15 DVVFLKVDVDESED----IAMAYDISSMPTFVFVKSTAKVE 51 (70)
Q Consensus 15 ~i~~~~vd~~~~~~----~~~~~~i~~~Pt~~~~~~g~~~~ 51 (70)
++.+..+|++++++ +.+.++..++|++ |.+|+.+.
T Consensus 44 ~i~~~~vdi~~~~~~~~~l~~~~g~~~vP~i--fi~g~~ig 82 (109)
T 1wik_A 44 GVEYETFDILEDEEVRQGLKTFSNWPTYPQL--YVRGDLVG 82 (109)
T ss_dssp CSCEEEEESSSCHHHHHHHHHHHSCCSSCEE--ECSSSEEE
T ss_pred CCCeEEEECCCCHHHHHHHHHHhCCCCCCEE--EECCEEEc
Confidence 47888899887654 4456688999985 56886543
No 297
>3fhk_A UPF0403 protein YPHP; disulfide isomerase, thioredoxin superfamily, CXC motif, structural genomics, surface entropy reduction, Ser, PSI-2; 2.30A {Bacillus subtilis}
Probab=90.49 E-value=0.52 Score=24.91 Aligned_cols=30 Identities=17% Similarity=0.462 Sum_probs=21.3
Q ss_pred CccCEEEEEeCCeEEe-----eeeCCCHHHHHHHH
Q psy11066 36 SSMPTFVFVKSTAKVE-----QFSGANFDKLRSTV 65 (70)
Q Consensus 36 ~~~Pt~~~~~~g~~~~-----~~~g~~~~~l~~~i 65 (70)
.+-|++.+||+|+.+. .+.|.+.+.|.+-|
T Consensus 105 PSSPS~ALfKdGelVh~ieRh~IEGr~a~~Ia~~L 139 (147)
T 3fhk_A 105 PSSPSMALLKGKEVVHFIPRHEIEGHDMEEIMKNL 139 (147)
T ss_dssp CCSSEEEEEETTEEEEEECGGGTTTSCHHHHHHHH
T ss_pred CCCchheeeeCCEEEEEeehhhcCCCCHHHHHHHH
Confidence 5789999999999864 45676655544443
No 298
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=90.39 E-value=0.43 Score=23.34 Aligned_cols=34 Identities=15% Similarity=0.200 Sum_probs=22.1
Q ss_pred cEEEEEeCcCc----HH----HHHHcCCCccCEEEEEeCCeEEe
Q psy11066 16 VVFLKVDVDES----ED----IAMAYDISSMPTFVFVKSTAKVE 51 (70)
Q Consensus 16 i~~~~vd~~~~----~~----~~~~~~i~~~Pt~~~~~~g~~~~ 51 (70)
+.+..+|++.. ++ +.+.++..++|++ |.+|+.+.
T Consensus 44 i~~~~~di~~~~~~~~~~~~~l~~~~g~~tvP~i--fi~g~~ig 85 (113)
T 3rhb_A 44 VQPLVVELDQLGPQGPQLQKVLERLTGQHTVPNV--FVCGKHIG 85 (113)
T ss_dssp CCCEEEEGGGSTTHHHHHHHHHHHHHSCCSSCEE--EETTEEEE
T ss_pred CCCeEEEeecCCCChHHHHHHHHHHhCCCCcCEE--EECCEEEc
Confidence 45556666542 22 4556799999998 46886654
No 299
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=90.00 E-value=1.2 Score=25.90 Aligned_cols=38 Identities=13% Similarity=0.152 Sum_probs=27.3
Q ss_pred HHHHHHcCCCcc--CEEEEEeCCeEEeeeeCCCHHHHHHHHHhh
Q psy11066 27 EDIAMAYDISSM--PTFVFVKSTAKVEQFSGANFDKLRSTVLAN 68 (70)
Q Consensus 27 ~~~~~~~~i~~~--Pt~~~~~~g~~~~~~~g~~~~~l~~~i~~~ 68 (70)
..+.+.++.+++ |++++ ||+. .+.|.+.+.|.+.|.+.
T Consensus 102 ~~~~~~~G~~tVyTPqI~I--ng~~--~v~G~d~~~l~~~l~~~ 141 (270)
T 2axo_A 102 YGYMRALGRNGVYTPQAIL--NGRD--HVKGADVRGIYDRLDAF 141 (270)
T ss_dssp HHHHHHTTCSCCCSSEEEE--TTTE--EEETTCHHHHHHHHHHH
T ss_pred HHHHHHhCCCcccCCEEEE--CCEE--eecCCCHHHHHHHHHHh
Confidence 347888999999 98664 6753 34677778888877643
No 300
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=89.60 E-value=0.62 Score=22.98 Aligned_cols=35 Identities=14% Similarity=0.252 Sum_probs=23.1
Q ss_pred CcEEEEEeCcC--c-----HHHHHHcCCCccCEEEEEeCCeEEe
Q psy11066 15 DVVFLKVDVDE--S-----EDIAMAYDISSMPTFVFVKSTAKVE 51 (70)
Q Consensus 15 ~i~~~~vd~~~--~-----~~~~~~~~i~~~Pt~~~~~~g~~~~ 51 (70)
++.+..+|++. . ..+.+..+..++|++++ +|+.+.
T Consensus 41 ~i~~~~~dvd~~~~~~~~~~~l~~~~g~~tvP~vfi--~g~~ig 82 (114)
T 3h8q_A 41 GVECNVLELDQVDDGARVQEVLSEITNQKTVPNIFV--NKVHVG 82 (114)
T ss_dssp TCCCEEEETTTSTTHHHHHHHHHHHHSCCSSCEEEE--TTEEEE
T ss_pred CCCcEEEEecCCCChHHHHHHHHHHhCCCccCEEEE--CCEEEe
Confidence 35566666664 2 23567778999999864 886554
No 301
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=89.21 E-value=0.77 Score=24.21 Aligned_cols=31 Identities=3% Similarity=-0.047 Sum_probs=20.6
Q ss_pred cHHHHHHcCCCc-----------cCEEEEEeCCeEEeeeeCC
Q psy11066 26 SEDIAMAYDISS-----------MPTFVFVKSTAKVEQFSGA 56 (70)
Q Consensus 26 ~~~~~~~~~i~~-----------~Pt~~~~~~g~~~~~~~g~ 56 (70)
...+++.|++.. .|+.+++.+|+.+..+.|.
T Consensus 113 ~~~~~~~ygv~~~~~~~~~g~~~~~~t~~I~~G~I~~~~~~~ 154 (171)
T 2pwj_A 113 DGSFHKSLELTTDLSAGLLGIRSERWSAYVVDGKVKALNVEE 154 (171)
T ss_dssp TCHHHHHHTCEEECTTTTCCEEECCEEEEEETTEEEEEEECS
T ss_pred ccHHHHHhCCccccccccCCcccceeEEEEECCEEEEEEeec
Confidence 345677788753 3444444499999888875
No 302
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=85.37 E-value=4.8 Score=24.85 Aligned_cols=60 Identities=10% Similarity=0.063 Sum_probs=43.4
Q ss_pred HhhCC---CcEEEEEeCcCcHH---HHHHcCCC-----ccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 10 ASEFP---DVVFLKVDVDESED---IAMAYDIS-----SMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 10 ~~~~~---~i~~~~vd~~~~~~---~~~~~~i~-----~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
..+++ ++++..+.|--|.. --.++|+. +-|...+|++|+.+..+.+. -.+.|.+.|+++.
T Consensus 327 ~~~~~~~~~l~VAVMGCvVNGPGEa~~ADiGi~~~G~G~~~~~~lf~~G~~~~~v~~~~iv~~l~~~i~~~~ 398 (406)
T 4g9p_A 327 RARYPGVEELKVAVMGCVVNGPGESKHAHIGISLPGAGEEPKAPVYADGKLLTILKGEGIAEEFLRLVEDYV 398 (406)
T ss_dssp HHHSTTGGGCEEEEESSTTTHHHHHHHSSEEEECCCTTSCSEEEEEETTEEEEEEESSCHHHHHHHHHHHHH
T ss_pred hhccCCCCCCEEEEECCcccCcchhhhcCcCcccCCCCCCCeeeEEECCEEEEecCHHHHHHHHHHHHHHHH
Confidence 34455 38999999875532 23456764 67899999999999999888 4677777777653
No 303
>2a2p_A Selenoprotein M, SELM protein; redox enzyme, oxidoreductase; NMR {Mus musculus} SCOP: c.47.1.23
Probab=83.97 E-value=2.3 Score=22.09 Aligned_cols=32 Identities=16% Similarity=0.304 Sum_probs=24.1
Q ss_pred ccCEEEEE-eCCeEEeeee--CCCHHHHHHHHHhh
Q psy11066 37 SMPTFVFV-KSTAKVEQFS--GANFDKLRSTVLAN 68 (70)
Q Consensus 37 ~~Pt~~~~-~~g~~~~~~~--g~~~~~l~~~i~~~ 68 (70)
+-|+++++ .+|+++.++. +.+.+.|.++|.+.
T Consensus 55 a~P~LvL~D~~G~e~E~I~Iekw~~d~I~efL~e~ 89 (129)
T 2a2p_A 55 ADPELVLLSRNYQELERIPLSQMTRDEINALVQEL 89 (129)
T ss_dssp CCCEEEEECSSSCCCEEEECSSSCHHHHHHHHHHH
T ss_pred CCCEEEEecCCCCEEEEeecccCCHHHHHHHHHHc
Confidence 67899999 4777665544 44999999999764
No 304
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=82.99 E-value=2.6 Score=22.79 Aligned_cols=31 Identities=13% Similarity=0.075 Sum_probs=21.2
Q ss_pred cHHHHHHcCCC-----------ccCEEEEEeCCeEEeeeeCC
Q psy11066 26 SEDIAMAYDIS-----------SMPTFVFVKSTAKVEQFSGA 56 (70)
Q Consensus 26 ~~~~~~~~~i~-----------~~Pt~~~~~~g~~~~~~~g~ 56 (70)
+.++++.||+. +.|+.+++++|+......+.
T Consensus 117 ~~~va~ayGv~~~~~~~G~g~~s~R~tfII~dG~I~~~~~~~ 158 (176)
T 4f82_A 117 SAAFTHALGLTQDLSARGMGIRSLRYAMVIDGGVVKTLAVEA 158 (176)
T ss_dssp TCHHHHHHTCEEECGGGTCCEEECCEEEEEETTEEEEEEECC
T ss_pred chHHHHHhCCCccccccCCCcccccEEEEEcCCEEEEEEEcC
Confidence 35678888773 24665555999988777643
No 305
>1wwj_A Circadian clock protein KAIB; 1.90A {Synechocystis SP} PDB: 1r5p_A 2qke_A 1vgl_A
Probab=82.31 E-value=0.044 Score=27.56 Aligned_cols=27 Identities=22% Similarity=0.278 Sum_probs=25.4
Q ss_pred cEEEEEeCcCcHHHHHHcCCCccCEEE
Q psy11066 16 VVFLKVDVDESEDIAMAYDISSMPTFV 42 (70)
Q Consensus 16 i~~~~vd~~~~~~~~~~~~i~~~Pt~~ 42 (70)
..+-.+|+.+.+++++.++|-++||++
T Consensus 40 y~LeVIDv~~~PelAe~~~IvAtPTLi 66 (105)
T 1wwj_A 40 YALKVIDVLKNPQLAEEDKILATPTLA 66 (105)
T ss_dssp EEEEEEETTTCCSCCTTCEEECHHHHG
T ss_pred eEEEEEEcccCHhHHhHCCeEEechhh
Confidence 888899999999999999999999986
No 306
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=81.50 E-value=1.6 Score=21.38 Aligned_cols=51 Identities=18% Similarity=0.149 Sum_probs=28.7
Q ss_pred CcEEEEEeCcCcHHH----HHHcCCCccCEEEEEeCCeEEeeeeC---C-CHHHHHHHHHh
Q psy11066 15 DVVFLKVDVDESEDI----AMAYDISSMPTFVFVKSTAKVEQFSG---A-NFDKLRSTVLA 67 (70)
Q Consensus 15 ~i~~~~vd~~~~~~~----~~~~~i~~~Pt~~~~~~g~~~~~~~g---~-~~~~l~~~i~~ 67 (70)
++.+..+|+++.++. .+..+...+|+++ -+|+.+.-+.- . ....|.++|++
T Consensus 47 gi~~~~~dI~~~~~~~~~l~~~~g~~tvP~if--i~g~~iGG~d~l~~l~~~G~L~~~L~~ 105 (109)
T 3ipz_A 47 NVPFEDVNILENEMLRQGLKEYSNWPTFPQLY--IGGEFFGGCDITLEAFKTGELQEEVEK 105 (109)
T ss_dssp TCCCEEEEGGGCHHHHHHHHHHHTCSSSCEEE--ETTEEEECHHHHHHHHHHSHHHHHHHH
T ss_pred CCCcEEEECCCCHHHHHHHHHHHCCCCCCeEE--ECCEEEeCHHHHHHHHHcCcHHHHHHH
Confidence 466777777765544 3445788999764 57854432221 1 23355555554
No 307
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=80.71 E-value=3 Score=19.19 Aligned_cols=34 Identities=9% Similarity=0.160 Sum_probs=22.7
Q ss_pred CcEEEEEeCc-----CcH----HHHHHcCCC-----ccCEEEEEeCCeE
Q psy11066 15 DVVFLKVDVD-----ESE----DIAMAYDIS-----SMPTFVFVKSTAK 49 (70)
Q Consensus 15 ~i~~~~vd~~-----~~~----~~~~~~~i~-----~~Pt~~~~~~g~~ 49 (70)
++.+-.+|++ ..+ ++.+..+.. ++|++++ .+|+.
T Consensus 28 gi~y~~idI~~~~~~~~~~~~~~l~~~~g~~~~~~~tvP~v~i-~~g~~ 75 (87)
T 1aba_A 28 KQPFEFINIMPEKGVFDDEKIAELLTKLGRDTQIGLTMPQVFA-PDGSH 75 (87)
T ss_dssp TCCEEEEESCSBTTBCCHHHHHHHHHHHTCSCCTTCCSCEEEC-TTSCE
T ss_pred CCCEEEEEeeccccccCHHHHHHHHHHhCCCCCCCCccCEEEE-ECCEE
Confidence 4667777777 443 356677888 8998763 36754
No 308
>2a4h_A Selenoprotein SEP15; redox, oxidoreductase; NMR {Drosophila melanogaster} SCOP: c.47.1.23
Probab=79.84 E-value=1.9 Score=22.30 Aligned_cols=34 Identities=18% Similarity=0.120 Sum_probs=25.2
Q ss_pred CccCEEEEE-eCCeEEeeee-CC-CHHHHHHHHHhhc
Q psy11066 36 SSMPTFVFV-KSTAKVEQFS-GA-NFDKLRSTVLANR 69 (70)
Q Consensus 36 ~~~Pt~~~~-~~g~~~~~~~-g~-~~~~l~~~i~~~~ 69 (70)
-+-|.++++ .+|+++.++. .. +.+.+.++|.+.+
T Consensus 60 Ga~P~LvLlD~~Ge~~E~I~IekW~tD~I~efL~ekL 96 (126)
T 2a4h_A 60 GLDPVVKLLDASGKVQETLSITKWNTDTVEEFFETHL 96 (126)
T ss_dssp SCCCEEEECCSSSCCSEEEECSSSSCSHHHHHHHHHS
T ss_pred CCCCEEEEecCCCCEeeEeccccCCHHHHHHHHHHHh
Confidence 367888888 5787776665 33 8899999998765
No 309
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=77.82 E-value=4.1 Score=19.06 Aligned_cols=34 Identities=12% Similarity=0.238 Sum_probs=23.5
Q ss_pred CcEEEEEeCcCcHH----HHHHcC--CCccCEEEEEeCCeEE
Q psy11066 15 DVVFLKVDVDESED----IAMAYD--ISSMPTFVFVKSTAKV 50 (70)
Q Consensus 15 ~i~~~~vd~~~~~~----~~~~~~--i~~~Pt~~~~~~g~~~ 50 (70)
++.+..+|++..++ +.+.+| ...+|+++ -+|+.+
T Consensus 32 ~i~~~~~di~~~~~~~~~l~~~~g~~~~~vP~if--i~g~~i 71 (93)
T 1t1v_A 32 RIQYQLVDISQDNALRDEMRTLAGNPKATPPQIV--NGNHYC 71 (93)
T ss_dssp TCCCEEEETTSCHHHHHHHHHHTTCTTCCSCEEE--ETTEEE
T ss_pred CCceEEEECCCCHHHHHHHHHHhCCCCCCCCEEE--ECCEEE
Confidence 47788888876643 445677 67999874 577644
No 310
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=77.63 E-value=4.3 Score=20.84 Aligned_cols=34 Identities=21% Similarity=0.220 Sum_probs=23.2
Q ss_pred CcEEEEEeCcCcHHH----HHHcCCCccCEEEEEeCCeEE
Q psy11066 15 DVVFLKVDVDESEDI----AMAYDISSMPTFVFVKSTAKV 50 (70)
Q Consensus 15 ~i~~~~vd~~~~~~~----~~~~~i~~~Pt~~~~~~g~~~ 50 (70)
++.|..+|+++.+++ .+..+..++|++ |.+|+.+
T Consensus 64 gv~y~~vdI~~d~~~~~~L~~~~G~~tvP~V--fI~G~~i 101 (135)
T 2wci_A 64 GERFAYVDILQNPDIRAELPKYANWPTFPQL--WVDGELV 101 (135)
T ss_dssp CSCCEEEEGGGCHHHHHHHHHHHTCCSSCEE--EETTEEE
T ss_pred CCceEEEECCCCHHHHHHHHHHHCCCCcCEE--EECCEEE
Confidence 477888888766544 344578889986 4578654
No 311
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=72.66 E-value=6.8 Score=19.10 Aligned_cols=35 Identities=17% Similarity=0.210 Sum_probs=23.3
Q ss_pred CcEEEEEeCcCcHH----HHHHc--------CCCccCEEEEEeCCeEEe
Q psy11066 15 DVVFLKVDVDESED----IAMAY--------DISSMPTFVFVKSTAKVE 51 (70)
Q Consensus 15 ~i~~~~vd~~~~~~----~~~~~--------~i~~~Pt~~~~~~g~~~~ 51 (70)
++.+..+|++..++ +.+.+ +...+|+++ -+|+.+.
T Consensus 38 gi~y~~vdI~~~~~~~~~l~~~~~~~~~~~~g~~tvP~vf--i~g~~iG 84 (111)
T 2ct6_A 38 KIEFEEVDITMSEEQRQWMYKNVPPEKKPTQGNPLPPQIF--NGDRYCG 84 (111)
T ss_dssp TCCEEEEETTTCHHHHHHHHHSCCTTTCCSSSSCCSCEEE--ETTEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHhcccccccCCCCCCCEEE--ECCEEEe
Confidence 47888899887654 34444 677888764 5776443
No 312
>1m2d_A [2Fe-2S] ferredoxin; thioredoxin-like fold, [2Fe-2S] cluster, Cys59Ser variant, electron transport; 1.05A {Aquifex aeolicus} SCOP: c.47.1.11 PDB: 1m2a_A 1f37_A 1m2b_A
Probab=69.40 E-value=6.6 Score=19.25 Aligned_cols=29 Identities=14% Similarity=0.130 Sum_probs=21.3
Q ss_pred ccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 37 SMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 37 ~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
.-|.+.++.+| .+.|. +.+++.+.|++++
T Consensus 61 ~gP~v~V~P~~----~~y~~vt~e~v~~il~~~l 90 (110)
T 1m2d_A 61 MGPVVVVYPDG----VWYGQVKPEDVDEIVEKHL 90 (110)
T ss_dssp GCSCEEEETTT----EEECSCCGGGHHHHHHHTT
T ss_pred CCCEEEEEeCC----EEEecCCHHHHHHHHHHHH
Confidence 46888888666 35566 8888888887754
No 313
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=64.89 E-value=16 Score=20.38 Aligned_cols=42 Identities=14% Similarity=0.195 Sum_probs=26.8
Q ss_pred cHHHHHHcCCC------ccCEEEEE-eCCeEEeee-----eCCCHHHHHHHHHh
Q psy11066 26 SEDIAMAYDIS------SMPTFVFV-KSTAKVEQF-----SGANFDKLRSTVLA 67 (70)
Q Consensus 26 ~~~~~~~~~i~------~~Pt~~~~-~~g~~~~~~-----~g~~~~~l~~~i~~ 67 (70)
..++++.||+. ..+.++++ ++|...... .|.+.+++...|+.
T Consensus 125 ~~~vak~YGv~~~~~g~~~R~tFiID~~G~Ir~~~v~~~~~grn~dEiLr~l~A 178 (216)
T 3sbc_A 125 NHSLSRDYGVLIEEEGVALRGLFIIDPKGVIRHITINDLPVGRNVDEALRLVEA 178 (216)
T ss_dssp TSHHHHHHTCEETTTTEECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHH
T ss_pred CCHHHHHcCCeeccCCceeeEEEEECCCCeEEEEEEcCCCCCCCHHHHHHHHHH
Confidence 35688999984 45666666 678765433 24467777766654
No 314
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=62.62 E-value=5.2 Score=20.31 Aligned_cols=14 Identities=7% Similarity=0.297 Sum_probs=11.3
Q ss_pred cCEEEEEeCCeEEe
Q psy11066 38 MPTFVFVKSTAKVE 51 (70)
Q Consensus 38 ~Pt~~~~~~g~~~~ 51 (70)
-|++.+++||+.+.
T Consensus 29 ~P~I~W~knG~~l~ 42 (126)
T 1he7_A 29 APSLRWLFNGSVLN 42 (126)
T ss_dssp CCEEEEEETTEECC
T ss_pred CCeEEEEECCEECC
Confidence 46899999998764
No 315
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=61.07 E-value=9.3 Score=18.68 Aligned_cols=34 Identities=15% Similarity=0.258 Sum_probs=22.3
Q ss_pred CcEEEEEeCcCcHHHH----HHcCCCccCEEEEEeCCeEE
Q psy11066 15 DVVFLKVDVDESEDIA----MAYDISSMPTFVFVKSTAKV 50 (70)
Q Consensus 15 ~i~~~~vd~~~~~~~~----~~~~i~~~Pt~~~~~~g~~~ 50 (70)
++.+..+|+++.+++. +..+...+|+++ -+|+.+
T Consensus 45 gi~y~~~di~~d~~~~~~l~~~~g~~tvP~if--i~g~~i 82 (111)
T 3zyw_A 45 NIQFSSFDIFSDEEVRQGLKAYSSWPTYPQLY--VSGELI 82 (111)
T ss_dssp TCCCEEEEGGGCHHHHHHHHHHHTCCSSCEEE--ETTEEE
T ss_pred CCCeEEEECcCCHHHHHHHHHHHCCCCCCEEE--ECCEEE
Confidence 4667778877665543 334788999874 477544
No 316
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=60.36 E-value=19 Score=22.01 Aligned_cols=55 Identities=5% Similarity=-0.026 Sum_probs=38.1
Q ss_pred CcEEEEEeCcCcHH---HHHHcCCC-ccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhhc
Q psy11066 15 DVVFLKVDVDESED---IAMAYDIS-SMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLANR 69 (70)
Q Consensus 15 ~i~~~~vd~~~~~~---~~~~~~i~-~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~~ 69 (70)
++++..+.|--|.. --.++|+. +-+...+|++|+.+.++.+. -.+.|.+.|+++.
T Consensus 301 ~lkVAVMGCvVNGPGEa~~ADiGiagg~~~~~lf~~Ge~v~~v~~~~~~~~l~~~I~~~~ 360 (366)
T 3noy_A 301 PLKVAVMGCVVNAIGEAREADIGLACGRGFAWLFKHGKPIKKVDESEMVDELLKEIQNME 360 (366)
T ss_dssp CCEEEEESSSHHHHHHTTTCSEEEEECSSEEEEEETTEEEEEEESCHHHHHHHHHHHC--
T ss_pred CCEEEEEcccccCCchhhhCCEeEecCCCceEEEECCEEeeecCHHHHHHHHHHHHHHHH
Confidence 48899998863321 12355655 44678899999999988887 5778888887654
No 317
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=59.45 E-value=13 Score=18.46 Aligned_cols=35 Identities=11% Similarity=0.139 Sum_probs=22.7
Q ss_pred CcE-EEEEeCcCcHHHH----HHcCCCccCEEEEEeCCeEEe
Q psy11066 15 DVV-FLKVDVDESEDIA----MAYDISSMPTFVFVKSTAKVE 51 (70)
Q Consensus 15 ~i~-~~~vd~~~~~~~~----~~~~i~~~Pt~~~~~~g~~~~ 51 (70)
++. +..+|+++.+++. +..+...+|+++ -+|+.+.
T Consensus 49 gv~~~~~vdV~~d~~~~~~l~~~tg~~tvP~vf--I~g~~IG 88 (118)
T 2wem_A 49 GVRDYAAYNVLDDPELRQGIKDYSNWPTIPQVY--LNGEFVG 88 (118)
T ss_dssp TCCCCEEEESSSCHHHHHHHHHHHTCCSSCEEE--ETTEEEE
T ss_pred CCCCCEEEEcCCCHHHHHHHHHHhCCCCcCeEE--ECCEEEe
Confidence 463 7778887665543 334788999974 5785543
No 318
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=57.57 E-value=4.3 Score=23.63 Aligned_cols=21 Identities=14% Similarity=0.225 Sum_probs=15.6
Q ss_pred CcHHHHHHcC-CCccCEEEEEe
Q psy11066 25 ESEDIAMAYD-ISSMPTFVFVK 45 (70)
Q Consensus 25 ~~~~~~~~~~-i~~~Pt~~~~~ 45 (70)
++..+..+.| |+++||+++..
T Consensus 243 ~~~~~~~~~G~i~gtP~ii~~~ 264 (273)
T 3tdg_A 243 NTTKKIFESGVIKGVPFLYHYK 264 (273)
T ss_dssp HHHHHHHSSSSSCSSSEEEEC-
T ss_pred HHHHHHHHcCCcccCcEEEecC
Confidence 3445677889 99999988664
No 319
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=49.63 E-value=12 Score=17.82 Aligned_cols=14 Identities=21% Similarity=0.382 Sum_probs=11.2
Q ss_pred cCEEEEEeCCeEEe
Q psy11066 38 MPTFVFVKSTAKVE 51 (70)
Q Consensus 38 ~Pt~~~~~~g~~~~ 51 (70)
.|++.++++|+.+.
T Consensus 42 ~p~v~W~k~g~~l~ 55 (107)
T 3knb_B 42 PPVVVWEKGGQQLA 55 (107)
T ss_dssp CCEEEEEETTEECC
T ss_pred CCEEEEEECccccc
Confidence 57899999998763
No 320
>2k0q_A Putative uncharacterized protein COPK; copper, heavy metal resistance, open barrel, plasmid- encoded, metal binding protein; NMR {Cupriavidus metallidurans} PDB: 2km0_A 2lel_A 3dso_A 3dsp_A 3n7d_A 3n7e_A
Probab=49.57 E-value=7.9 Score=18.01 Aligned_cols=15 Identities=7% Similarity=-0.006 Sum_probs=11.1
Q ss_pred CCccCEEEEEeCCeE
Q psy11066 35 ISSMPTFVFVKSTAK 49 (70)
Q Consensus 35 i~~~Pt~~~~~~g~~ 49 (70)
...-.|+.+|++|+-
T Consensus 12 LkDGstvyiFKDGKM 26 (74)
T 2k0q_A 12 LQDGSKVHVFKDGKM 26 (74)
T ss_dssp BTTSCEEEEETTSCE
T ss_pred cCCCcEEEEEcCCce
Confidence 344568999999974
No 321
>1s3a_A NADH-ubiquinone oxidoreductase B8 subunit; CI-B8, ndufa2, complex I; NMR {Homo sapiens} SCOP: c.47.1.22
Probab=48.39 E-value=23 Score=17.16 Aligned_cols=33 Identities=6% Similarity=0.006 Sum_probs=22.5
Q ss_pred ccCEEEEE-eCCeEEe-eeeCCCHHHHHHHHHhhc
Q psy11066 37 SMPTFVFV-KSTAKVE-QFSGANFDKLRSTVLANR 69 (70)
Q Consensus 37 ~~Pt~~~~-~~g~~~~-~~~g~~~~~l~~~i~~~~ 69 (70)
.-|.+... .+|++.. ...+.+.++|.+.+....
T Consensus 64 ~~P~i~a~Y~~G~ek~i~l~n~s~~eI~~~l~~l~ 98 (102)
T 1s3a_A 64 VQPKLWARYAFGQETNVPLNNFSADQVTRALENVL 98 (102)
T ss_dssp SSCEEEEEESSCCEEEEECTTCCHHHHHHHHHHHH
T ss_pred CCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHH
Confidence 57776665 6786543 444558999999887653
No 322
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=48.03 E-value=13 Score=17.34 Aligned_cols=14 Identities=14% Similarity=0.292 Sum_probs=11.2
Q ss_pred cCEEEEEeCCeEEe
Q psy11066 38 MPTFVFVKSTAKVE 51 (70)
Q Consensus 38 ~Pt~~~~~~g~~~~ 51 (70)
.|++.++++|+.+.
T Consensus 34 ~p~v~W~k~g~~i~ 47 (100)
T 3knb_A 34 TPEVTWSCGGRKIH 47 (100)
T ss_dssp CCEEEEEETTEECC
T ss_pred CCEEEEEECceEee
Confidence 57899999998763
No 323
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=47.39 E-value=28 Score=17.95 Aligned_cols=41 Identities=17% Similarity=0.255 Sum_probs=27.2
Q ss_pred HHHHHHcCCCccCEEEEEeCCeEEeeeeCCCHHHHHHHHHh
Q psy11066 27 EDIAMAYDISSMPTFVFVKSTAKVEQFSGANFDKLRSTVLA 67 (70)
Q Consensus 27 ~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~l~~~i~~ 67 (70)
..++..|+|...-++.---.|....++.|.+.+.++..+++
T Consensus 63 erl~~efni~v~y~imgsgsgvm~i~f~gddlea~ekalke 103 (170)
T 4hhu_A 63 ERLKAEFNINVQYQIMGSGSGVMVIVFEGDDLEALEKALKE 103 (170)
T ss_dssp HHHHHHHTCEEEEEEECTTCCEEEEEEECSCHHHHHHHHHH
T ss_pred HHHHHhcceEEEEEEEeCCceEEEEEEecCcHHHHHHHHHH
Confidence 45678889886555553345667788889876666555543
No 324
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=47.19 E-value=17 Score=16.92 Aligned_cols=14 Identities=14% Similarity=0.280 Sum_probs=10.9
Q ss_pred cCEEEEEeCCeEEe
Q psy11066 38 MPTFVFVKSTAKVE 51 (70)
Q Consensus 38 ~Pt~~~~~~g~~~~ 51 (70)
-|++.++++|+.+.
T Consensus 30 ~P~i~W~k~g~~l~ 43 (103)
T 1wwb_X 30 KPALQWFYNGAILN 43 (103)
T ss_dssp CCEEEEEETTEEEC
T ss_pred CCEEEEEECCEECC
Confidence 56799999997653
No 325
>3jr7_A Uncharacterized EGV family protein COG1307; structural genomics, PSI2, MCSG, protein struct initiative; HET: PG6; 2.00A {Ruminococcus gnavus}
Probab=47.16 E-value=41 Score=19.60 Aligned_cols=44 Identities=2% Similarity=-0.028 Sum_probs=29.6
Q ss_pred CcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCCCHHHHHHHHHh
Q psy11066 23 VDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGANFDKLRSTVLA 67 (70)
Q Consensus 23 ~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~l~~~i~~ 67 (70)
+|-.+++.++++|.-+|--+.+ +|+.-..-...+.+++.+.+.+
T Consensus 30 ~dL~~e~~~~~~I~vvPL~v~~-~~~~y~D~~di~~~efy~~~~~ 73 (298)
T 3jr7_A 30 GEFTPEMKADGGFEHVALGIQI-EDTQWTDDDSLKQEELLLKIAE 73 (298)
T ss_dssp SCCCHHHHHHSSEEEECCEEEE-TTEEEECSTTSCHHHHHHHHHH
T ss_pred CCCCHHHHHhCCeEEEEEEEEE-CCEEEecCCCCCHHHHHHHHHh
Confidence 4456788999999999998888 4543221112377777777753
No 326
>2z8u_A Tata-box-binding protein; transcription, DNA-binding protein, transcription factor, transcription regulation; 1.90A {Methanococcus jannaschii}
Probab=47.06 E-value=34 Score=18.71 Aligned_cols=35 Identities=17% Similarity=0.294 Sum_probs=20.5
Q ss_pred HcCCCccCEEE-----------EEeCCeEEeeeeCC-CHHHHHHHHHhh
Q psy11066 32 AYDISSMPTFV-----------FVKSTAKVEQFSGA-NFDKLRSTVLAN 68 (70)
Q Consensus 32 ~~~i~~~Pt~~-----------~~~~g~~~~~~~g~-~~~~l~~~i~~~ 68 (70)
.|+-...|-++ +|..|+.+ +.|. +.+++...++.+
T Consensus 132 eYePe~fPgliyR~~~Pk~t~lIF~SGKiv--iTGaks~~~~~~A~~~i 178 (188)
T 2z8u_A 132 EYEPEQFPGLVYRLDDPKVVVLIFGSGKVV--ITGLKSEEDAKRALKKI 178 (188)
T ss_dssp EECTTTSSSEEEEEETTEEEEEECTTSEEE--EESCSCHHHHHHHHHHH
T ss_pred EECCccCceEEEEeCCCcEEEEEeCCCEEE--EEecCCHHHHHHHHHHH
Confidence 45555556544 34444433 5677 888877776654
No 327
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=46.09 E-value=6.8 Score=17.91 Aligned_cols=14 Identities=7% Similarity=0.067 Sum_probs=11.1
Q ss_pred cCEEEEEeCCeEEe
Q psy11066 38 MPTFVFVKSTAKVE 51 (70)
Q Consensus 38 ~Pt~~~~~~g~~~~ 51 (70)
-|++.+|+||+.+.
T Consensus 24 ~p~v~W~k~g~~l~ 37 (84)
T 2lu7_A 24 GGPVRWYKDGERLA 37 (84)
T ss_dssp STTCEEEETTEECC
T ss_pred CcEEEEEECCEEcc
Confidence 46789999998763
No 328
>2kzf_A RBFA, ribosome-binding factor A; JCSG, joint center structural genomics, PSI-biology, protein structure initiative; NMR {Thermotoga maritima}
Probab=45.72 E-value=27 Score=17.12 Aligned_cols=20 Identities=20% Similarity=0.223 Sum_probs=16.7
Q ss_pred HHHHHcCCCccCEEEEEeCC
Q psy11066 28 DIAMAYDISSMPTFVFVKST 47 (70)
Q Consensus 28 ~~~~~~~i~~~Pt~~~~~~g 47 (70)
.+++..++..+|.+.|..+.
T Consensus 80 ~l~~~l~lr~~P~L~F~~D~ 99 (106)
T 2kzf_A 80 FIAKNLRLYVAPEIRFYEDK 99 (106)
T ss_dssp HHHHHSCSSSCCEEEEESSC
T ss_pred HHHhhcCCccCCeEEEEECC
Confidence 36788899999999998654
No 329
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=44.88 E-value=54 Score=20.34 Aligned_cols=33 Identities=24% Similarity=0.359 Sum_probs=24.0
Q ss_pred CccCEEEEEeCCe-EEeeeeCC-CHHHHHHHHHhh
Q psy11066 36 SSMPTFVFVKSTA-KVEQFSGA-NFDKLRSTVLAN 68 (70)
Q Consensus 36 ~~~Pt~~~~~~g~-~~~~~~g~-~~~~l~~~i~~~ 68 (70)
...|++.+.++|+ .-.++.|. .-.++.+++..+
T Consensus 60 ~~~p~~~~~~~~~~~~i~f~g~p~g~e~~s~~~~l 94 (521)
T 1hyu_A 60 VRKPSFLITNPGSQQGPRFAGSPLGHEFTSLVLAL 94 (521)
T ss_dssp SCSSEEEEECTTCCCSCEEESCCCGGGHHHHHHHH
T ss_pred cCCCEEEEecCCCcceEEEeccCcchhHHHHHHHH
Confidence 4679999998775 34678888 666777777654
No 330
>3pl5_A SMU_165, putative uncharacterized protein; fatty acid binding protein, lipid binding protein; HET: PLM; 2.04A {Streptococcus mutans}
Probab=43.76 E-value=21 Score=21.13 Aligned_cols=43 Identities=12% Similarity=0.003 Sum_probs=28.1
Q ss_pred CcCcHHHHHHcCCCccCEEEEEeCCeEE-eeeeC-CCHHHHHHHHH
Q psy11066 23 VDESEDIAMAYDISSMPTFVFVKSTAKV-EQFSG-ANFDKLRSTVL 66 (70)
Q Consensus 23 ~~~~~~~~~~~~i~~~Pt~~~~~~g~~~-~~~~g-~~~~~l~~~i~ 66 (70)
+|-.+++.++++|.-+|--+.+ +|+.- +.... .+.+++.+++.
T Consensus 45 ~dL~~e~~~~~~I~vvPL~v~~-~~~~Y~D~vd~~i~~~efy~~m~ 89 (320)
T 3pl5_A 45 ADLPESWTQENDVQVLGLTVQL-DGITYETVGPDRLTSRVLLEKIA 89 (320)
T ss_dssp GCCCHHHHHHHTEEEECCEEEE-TTEEEESSSTTCCCHHHHHHHHH
T ss_pred CCCCHHHHHhCCeEEEeEEEEE-CCEEEEcCCCCCcCHHHHHHHHh
Confidence 4446788999999999998887 45432 22211 36666666654
No 331
>3egl_A DEGV family protein; alpha-beta-alpha sandwich, methylated lysines, structural GE PSI-2, protein structure initiative; HET: MLY MSE PLM; 2.41A {Corynebacterium glutamicum}
Probab=42.43 E-value=48 Score=19.10 Aligned_cols=43 Identities=16% Similarity=0.142 Sum_probs=28.8
Q ss_pred CcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCCCHHHHHHHHHh
Q psy11066 23 VDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGANFDKLRSTVLA 67 (70)
Q Consensus 23 ~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~l~~~i~~ 67 (70)
+|-.+++.++|+|.-+|--+.+.+... .-...+..++.+.+++
T Consensus 14 ~dL~~e~~~~~~I~vvPL~v~~~~~~p--~TSqps~~~~~~~f~~ 56 (277)
T 3egl_A 14 ACLPTHVAEDLDITVINLHVMNNGEER--STSGLSSLELAASYAR 56 (277)
T ss_dssp GCCCHHHHHHTTEEEECCEEEECSSCE--EEECCCHHHHHHHHHH
T ss_pred CCCCHHHHHHCCeEEEEEEEEECCccc--ccCCcCHHHHHHHHHH
Confidence 445678899999999999888855432 2222366666665544
No 332
>2dyj_A Ribosome-binding factor A; 16S rRNA processing, 17S RNA, KH domain; 1.84A {Thermus thermophilus} SCOP: d.52.7.1 PDB: 2r1c_A
Probab=41.52 E-value=27 Score=16.76 Aligned_cols=20 Identities=15% Similarity=0.306 Sum_probs=16.1
Q ss_pred HHHHHcCCCccCEEEEEeCC
Q psy11066 28 DIAMAYDISSMPTFVFVKST 47 (70)
Q Consensus 28 ~~~~~~~i~~~Pt~~~~~~g 47 (70)
.++++.++..+|.+.|..+.
T Consensus 72 ~l~~~l~lr~~P~L~F~~D~ 91 (95)
T 2dyj_A 72 ALARRVRMRRLPRLEFLPWR 91 (95)
T ss_dssp HHHTTSCCSSCCEEEEEEGG
T ss_pred HHHhhcCCccCCeEEEEEcC
Confidence 36778899999999998653
No 333
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=41.14 E-value=16 Score=17.06 Aligned_cols=16 Identities=19% Similarity=0.017 Sum_probs=12.3
Q ss_pred CccCEEEEEeCCeEEe
Q psy11066 36 SSMPTFVFVKSTAKVE 51 (70)
Q Consensus 36 ~~~Pt~~~~~~g~~~~ 51 (70)
..-|++.++++|+.+.
T Consensus 32 ~p~p~v~W~k~g~~l~ 47 (100)
T 2yuz_A 32 SENIPGKWTKNGLPVQ 47 (100)
T ss_dssp SSCCCEEEEETTEECC
T ss_pred CCCCeEEEEECCEECC
Confidence 3458899999998763
No 334
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=40.16 E-value=43 Score=17.89 Aligned_cols=30 Identities=10% Similarity=0.161 Sum_probs=20.0
Q ss_pred CcHHHHHHcCCC-----------ccCEEEEEeCCeEEeeee
Q psy11066 25 ESEDIAMAYDIS-----------SMPTFVFVKSTAKVEQFS 54 (70)
Q Consensus 25 ~~~~~~~~~~i~-----------~~Pt~~~~~~g~~~~~~~ 54 (70)
...++++.||+. ...+.+++.+|++.....
T Consensus 112 ~~~~~a~~yGv~~~~~~~G~g~~~~R~tfvIddG~V~~~~v 152 (182)
T 1xiy_A 112 GNSSFTDSMNMLVDKSNFFMGMRPWRFVAIVENNILVKMFQ 152 (182)
T ss_dssp TTSHHHHHTTCEEECGGGTCCEEECCEEEEEETTEEEEEEE
T ss_pred CchHHHHHhCCceeccccCCCCceEEEEEEEcCCEEEEEEE
Confidence 445678888873 245566668998766554
No 335
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=39.31 E-value=36 Score=16.78 Aligned_cols=31 Identities=13% Similarity=0.231 Sum_probs=20.6
Q ss_pred EEEEeCcCcHHH----HHHcCCCccCEEEEEeCCeEE
Q psy11066 18 FLKVDVDESEDI----AMAYDISSMPTFVFVKSTAKV 50 (70)
Q Consensus 18 ~~~vd~~~~~~~----~~~~~i~~~Pt~~~~~~g~~~ 50 (70)
+..+|+++.+++ .+..|...+|.++ -+|+.+
T Consensus 51 ~~~~dv~~~~~~~~~l~~~sg~~tvP~vf--I~g~~i 85 (121)
T 3gx8_A 51 FAAYNVLEDPELREGIKEFSEWPTIPQLY--VNKEFI 85 (121)
T ss_dssp EEEEECTTCHHHHHHHHHHHTCCSSCEEE--ETTEEE
T ss_pred EEEEEecCCHHHHHHHHHHhCCCCCCeEE--ECCEEE
Confidence 777787766544 3445778899874 578544
No 336
>1jos_A RBFA, ribosome-binding factor A; RNA binding protein, structure 2 function project, S2F, structural genomics; 1.70A {Haemophilus influenzae} SCOP: d.52.7.1 PDB: 1kkg_A
Probab=38.68 E-value=32 Score=17.49 Aligned_cols=19 Identities=16% Similarity=0.373 Sum_probs=16.2
Q ss_pred HHHHcCCCccCEEEEEeCC
Q psy11066 29 IAMAYDISSMPTFVFVKST 47 (70)
Q Consensus 29 ~~~~~~i~~~Pt~~~~~~g 47 (70)
+++..++..+|.+.|+.+.
T Consensus 82 l~~~l~lr~~PeL~F~~D~ 100 (128)
T 1jos_A 82 LGKAMRLRIVPEIRFIYDQ 100 (128)
T ss_dssp HHHHHCCSSCCEEEEEECC
T ss_pred HHhhcCCCcCCeEEEEEcC
Confidence 6778899999999999764
No 337
>3fys_A Protein DEGV; fatty acid-binding, EDD fold, fatty acid-binding protein; HET: PLM; 2.50A {Bacillus subtilis}
Probab=37.97 E-value=34 Score=20.16 Aligned_cols=41 Identities=10% Similarity=0.117 Sum_probs=27.4
Q ss_pred CcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeC--CCHHHHHHHHH
Q psy11066 23 VDESEDIAMAYDISSMPTFVFVKSTAKVEQFSG--ANFDKLRSTVL 66 (70)
Q Consensus 23 ~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g--~~~~~l~~~i~ 66 (70)
+|-.++..++++|.-+|--+.+. |+.- ..| .+.+++.+.+.
T Consensus 45 ~dL~~e~~~~~~I~vvPL~v~~~-~~~Y--~D~~di~~~efy~~m~ 87 (315)
T 3fys_A 45 AYIPKEMREQHQIHMIPLQVVFR-EETY--REEIELDWKSFYEEVK 87 (315)
T ss_dssp GCCCHHHHHHHTEEEECCEEECS-SCEE--EBTTTBCHHHHHHHHH
T ss_pred CCCCHHHHHhCCeEEEeEEEEEC-CEEE--ECCCCCCHHHHHHHHH
Confidence 44567889999999999988884 4332 223 26666666654
No 338
>3r08_E T-cell surface glycoprotein CD3 epsilon chain; antibody, T-cell receptor, signalling, immune SY; 4.10A {Cricetulus migratorius}
Probab=37.97 E-value=18 Score=16.87 Aligned_cols=17 Identities=12% Similarity=0.194 Sum_probs=12.5
Q ss_pred CCccCEEEEEeCCeEEe
Q psy11066 35 ISSMPTFVFVKSTAKVE 51 (70)
Q Consensus 35 i~~~Pt~~~~~~g~~~~ 51 (70)
+.+.|.+.++++|+.+.
T Consensus 23 ~~g~P~i~W~kdg~~l~ 39 (82)
T 3r08_E 23 LDSDENLKWEKNGQELP 39 (82)
T ss_dssp SCCCSSCEEEETTEECT
T ss_pred CCCCCcEEEEECCEECc
Confidence 45667788889998753
No 339
>2dt8_A DEGV family protein; fatty acid binding, structural genomics, NPPSFA, natio project on protein structural and functional analyses; HET: PLM; 1.48A {Thermus thermophilus}
Probab=37.76 E-value=56 Score=18.77 Aligned_cols=41 Identities=15% Similarity=0.105 Sum_probs=26.5
Q ss_pred CcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeC--CCHHHHHHHHH
Q psy11066 23 VDESEDIAMAYDISSMPTFVFVKSTAKVEQFSG--ANFDKLRSTVL 66 (70)
Q Consensus 23 ~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g--~~~~~l~~~i~ 66 (70)
+|-.++..++++|.-+|--+.+. |+.- ..| .+.+++.+.+.
T Consensus 11 ~dl~~~~~~~~~I~vvPl~v~~~-~~~y--~D~~di~~~efy~~~~ 53 (280)
T 2dt8_A 11 SDLPQDLRGRLGVRVVPLYVNLS-GAIY--RDWEEITPTEIFQKVR 53 (280)
T ss_dssp GCCCHHHHTTTTCEEECCEEEET-TEEE--ETTTTCCHHHHHHHHH
T ss_pred CCCCHHHHHhCCeEEEEEEEEEC-CEEE--ecCCCCCHHHHHHHHH
Confidence 34456778999999999998884 4322 122 25555555554
No 340
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=37.57 E-value=9.7 Score=18.70 Aligned_cols=16 Identities=6% Similarity=0.086 Sum_probs=12.9
Q ss_pred CccCEEEEEeCCeEEe
Q psy11066 36 SSMPTFVFVKSTAKVE 51 (70)
Q Consensus 36 ~~~Pt~~~~~~g~~~~ 51 (70)
.+.|++.+|+||+++.
T Consensus 33 s~~p~v~W~knG~~l~ 48 (112)
T 2e6q_A 33 STIIQGTWFLNGEELK 48 (112)
T ss_dssp SSCCCCEEEESSCBCC
T ss_pred CCCCeEEEEECCEECc
Confidence 3488999999998764
No 341
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=36.87 E-value=25 Score=15.73 Aligned_cols=15 Identities=27% Similarity=0.394 Sum_probs=11.3
Q ss_pred ccCEEEEEeCCeEEe
Q psy11066 37 SMPTFVFVKSTAKVE 51 (70)
Q Consensus 37 ~~Pt~~~~~~g~~~~ 51 (70)
..|++.++++|+.+.
T Consensus 33 p~p~v~W~k~g~~~~ 47 (99)
T 1g1c_A 33 PDPECEWYKNGVKIE 47 (99)
T ss_dssp SCCEEEEEETTEECC
T ss_pred CCCEEEEEECCEECC
Confidence 357899999997653
No 342
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=36.20 E-value=32 Score=15.36 Aligned_cols=15 Identities=13% Similarity=0.251 Sum_probs=11.5
Q ss_pred ccCEEEEEeCCeEEe
Q psy11066 37 SMPTFVFVKSTAKVE 51 (70)
Q Consensus 37 ~~Pt~~~~~~g~~~~ 51 (70)
..|++.++++|+.+.
T Consensus 33 p~p~v~W~~~g~~~~ 47 (100)
T 2kdg_A 33 PAPDVSWYLNGRTVQ 47 (100)
T ss_dssp SCCEEEEEETTEEEC
T ss_pred CCCEEEEEECCEECc
Confidence 357899999997754
No 343
>1u6t_A SH3 domain-binding glutamic acid-rich-like protein; SH3-binding, glutaredoxin, thioredoxin fold, crystallography, protein binding; HET: CIT; 1.90A {Homo sapiens} PDB: 1wry_A
Probab=36.17 E-value=44 Score=16.87 Aligned_cols=35 Identities=11% Similarity=0.179 Sum_probs=23.2
Q ss_pred CcEEEEEeCcCcHH----HHHHc--------CCCccCEEEEEeCCeEEe
Q psy11066 15 DVVFLKVDVDESED----IAMAY--------DISSMPTFVFVKSTAKVE 51 (70)
Q Consensus 15 ~i~~~~vd~~~~~~----~~~~~--------~i~~~Pt~~~~~~g~~~~ 51 (70)
+|.|-.+|++.+++ +.+.. |...+|.++ .+|+-+.
T Consensus 30 gV~feEidI~~d~~~r~eM~~~~~~~~~~~~G~~tvPQIF--i~~~~iG 76 (121)
T 1u6t_A 30 KIGFEEKDIAANEENRKWMRENVPENSRPATGYPLPPQIF--NESQYRG 76 (121)
T ss_dssp TCCEEEEECTTCHHHHHHHHHHSCGGGSCSSSSCCSCEEE--ETTEEEE
T ss_pred CCceEEEECCCCHHHHHHHHHhccccccccCCCcCCCEEE--ECCEEEe
Confidence 58999999986543 44566 667788554 5665443
No 344
>3bqa_A Sensor protein PHOQ; histidine kinase sensor domain, ATP-binding, inner membrane, magnesium, membrane, metal-binding, nucleotide-binding; 2.00A {Escherichia coli} PDB: 3bq8_A 1yax_A
Probab=35.70 E-value=24 Score=18.67 Aligned_cols=19 Identities=11% Similarity=0.158 Sum_probs=14.0
Q ss_pred ccCEEEEE--eCCeEEeeeeC
Q psy11066 37 SMPTFVFV--KSTAKVEQFSG 55 (70)
Q Consensus 37 ~~Pt~~~~--~~g~~~~~~~g 55 (70)
..||++++ .+|+.+++..-
T Consensus 39 n~ptLvlIYDe~G~lLW~qr~ 59 (148)
T 3bqa_A 39 QSPTMTLIYDENGQLLWAQRD 59 (148)
T ss_dssp TCSCEEEEECTTSCEEEESSC
T ss_pred CCCeEEEEEcCCCcEEEecCc
Confidence 56887766 57999887654
No 345
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=35.24 E-value=10 Score=17.56 Aligned_cols=14 Identities=21% Similarity=0.207 Sum_probs=10.8
Q ss_pred cCEEEEEeCCeEEe
Q psy11066 38 MPTFVFVKSTAKVE 51 (70)
Q Consensus 38 ~Pt~~~~~~g~~~~ 51 (70)
-|++.+++||+.+.
T Consensus 34 ~~~v~W~k~g~~i~ 47 (91)
T 2lvc_A 34 DAPVRWYKDGQEVE 47 (91)
T ss_dssp TSCCEEEETTSCCC
T ss_pred CcEEEEEECCEEee
Confidence 46788999998763
No 346
>2pb9_A Phosphomethylpyrimidine kinase; phosphate, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.70A {Pyrococcus furiosus} SCOP: c.74.1.2
Probab=34.95 E-value=59 Score=17.96 Aligned_cols=63 Identities=17% Similarity=0.149 Sum_probs=38.1
Q ss_pred HHHHHhhCCCcEEEEEeCcCcHH-------------HHHHcC-CCccCEEEEEeCC---eEEeeeeCCCHHHHHHHHHhh
Q psy11066 6 LQELASEFPDVVFLKVDVDESED-------------IAMAYD-ISSMPTFVFVKST---AKVEQFSGANFDKLRSTVLAN 68 (70)
Q Consensus 6 ~~~~~~~~~~i~~~~vd~~~~~~-------------~~~~~~-i~~~Pt~~~~~~g---~~~~~~~g~~~~~l~~~i~~~ 68 (70)
+.+..++. +..+..+|-.+.++ +...+. ..++|-+++=.+| +...++.|.+..++.+.+..+
T Consensus 108 i~~~l~~~-g~~v~~~dr~~ePeev~~~eg~tm~Wgi~~a~~~~~~~PdvIyd~G~~GkEP~i~vfG~dp~ev~~kv~~l 186 (195)
T 2pb9_A 108 IIEIAQER-GFKVSFYDRREEPEEIKAKEGATIPWGIETAIKRIKERPDIIYHLGDVGKEPMILVFGRNPREVLEKIKML 186 (195)
T ss_dssp HHHHHHHT-TCEEEECCGGGSCHHHHHSTTCHHHHHHHHHHHHSSSCEEEEEECCBTTBCCEEEEEESSHHHHHHHHHHT
T ss_pred HHHHHHHc-CCeEEEECCccCchhhhhcccccchHHHHHHHHhcCCCCeEEEeCCCCCCCcEEEEECCCHHHHHHHHHHH
Confidence 33444443 47888888765443 222221 1268877765443 357788899888887777665
Q ss_pred c
Q psy11066 69 R 69 (70)
Q Consensus 69 ~ 69 (70)
+
T Consensus 187 ~ 187 (195)
T 2pb9_A 187 I 187 (195)
T ss_dssp C
T ss_pred H
Confidence 4
No 347
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=34.81 E-value=27 Score=16.40 Aligned_cols=14 Identities=14% Similarity=0.356 Sum_probs=10.9
Q ss_pred ccCEEEEEeCCeEE
Q psy11066 37 SMPTFVFVKSTAKV 50 (70)
Q Consensus 37 ~~Pt~~~~~~g~~~ 50 (70)
--|++.++++|+.+
T Consensus 33 P~p~i~W~k~g~~l 46 (118)
T 1wwc_A 33 PPPTLHWLHNGQPL 46 (118)
T ss_dssp SCCEEEEEETTEEC
T ss_pred CCCeEEEEECCEEC
Confidence 35789999999765
No 348
>1pzx_A Hypothetical protein APC36103; structural genomics, two domains containing mixed alpha/beta structures, PSI; HET: PLM; 2.00A {Geobacillus stearothermophilus} SCOP: c.119.1.1
Probab=34.72 E-value=67 Score=18.53 Aligned_cols=41 Identities=12% Similarity=0.105 Sum_probs=26.5
Q ss_pred CcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC--CHHHHHHHHH
Q psy11066 23 VDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA--NFDKLRSTVL 66 (70)
Q Consensus 23 ~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~--~~~~l~~~i~ 66 (70)
+|-.++..++++|.-+|--+.+. |+.- ..|. +.+++.+.+.
T Consensus 13 ~dl~~e~~~~~~I~vvPl~v~~~-~~~y--~D~~di~~~efy~~~~ 55 (289)
T 1pzx_A 13 ADLPQSYIREHRIAFLPLVVHWN-GQDY--KDGITIEPKQVYDAMR 55 (289)
T ss_dssp GCCCHHHHHHTTCEEECCEEEET-TEEE--EBTTTBCHHHHHHHHT
T ss_pred CCCCHHHHhhCCeEEEEEEEEEC-CEEE--ecCCCCCHHHHHHHHH
Confidence 44467788999999999998884 4322 2232 5555555553
No 349
>2fhm_A Probable acylphosphatase; hydrolase; NMR {Bacillus subtilis} PDB: 2hlt_A 2hlu_A 3br8_A
Probab=34.69 E-value=40 Score=15.89 Aligned_cols=38 Identities=8% Similarity=-0.073 Sum_probs=23.0
Q ss_pred HHHHHHcCCCccCEEEEEeCCeEEeeeeCC--CHHHHHHHHH
Q psy11066 27 EDIAMAYDISSMPTFVFVKSTAKVEQFSGA--NFDKLRSTVL 66 (70)
Q Consensus 27 ~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~--~~~~l~~~i~ 66 (70)
..+|.++++.++ +.=..+|.+.....|. ..+.+.++|.
T Consensus 22 ~~~A~~lgl~G~--V~N~~dG~Vei~~eG~~~~i~~f~~~l~ 61 (91)
T 2fhm_A 22 QMEADKRKLAGW--VKNRDDGRVEILAEGPENALQSFVEAVK 61 (91)
T ss_dssp HHHHHHTTCEEE--EEECTTSCEEEEEEECHHHHHHHHHHHH
T ss_pred HHHHHHcCCeEE--EEECCCCcEEEEEEeCHHHHHHHHHHHH
Confidence 456888888885 2222467677777775 2344555554
No 350
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=33.28 E-value=34 Score=18.13 Aligned_cols=16 Identities=6% Similarity=0.094 Sum_probs=13.0
Q ss_pred CccCEEEEEeCCeEEe
Q psy11066 36 SSMPTFVFVKSTAKVE 51 (70)
Q Consensus 36 ~~~Pt~~~~~~g~~~~ 51 (70)
.--|++.+++||+.+.
T Consensus 30 ~P~p~i~W~kng~~l~ 45 (207)
T 3rbs_A 30 SGNAKVNYIFNEKEIF 45 (207)
T ss_dssp CSCCEEEEEETTEEEC
T ss_pred CCCCEEEEEECCEECc
Confidence 4568999999998873
No 351
>4a17_S RPL26, 60S ribosomal protein L21; eukaryotic ribosome, ribosome, eukaryotic initiation factor 60S, translation, large ribosomal subunit; 3.52A {Tetrahymena thermophila} PDB: 4a1a_S 4a1c_S 4a1e_S
Probab=33.25 E-value=24 Score=18.41 Aligned_cols=15 Identities=40% Similarity=0.727 Sum_probs=12.6
Q ss_pred CcHHHHHHcCCCccC
Q psy11066 25 ESEDIAMAYDISSMP 39 (70)
Q Consensus 25 ~~~~~~~~~~i~~~P 39 (70)
-..+|.++|+++++|
T Consensus 34 LSkeLr~ky~vRs~~ 48 (135)
T 4a17_S 34 LSKDLRSKYNVRSMP 48 (135)
T ss_dssp ECHHHHHHHTCSEEE
T ss_pred CCHHHHHHhCCCccc
Confidence 357889999999977
No 352
>2g7z_A Conserved hypothetical protein SPY1493; long-fatty acid binding protein, lipid binding protein, PSI, structural genomics; HET: MSE HXA; 2.05A {Streptococcus pyogenes}
Probab=33.24 E-value=36 Score=19.63 Aligned_cols=42 Identities=17% Similarity=0.235 Sum_probs=26.6
Q ss_pred CcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCCCHH-HHHHHHH
Q psy11066 23 VDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGANFD-KLRSTVL 66 (70)
Q Consensus 23 ~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~-~l~~~i~ 66 (70)
+|-.++..++++|.-+|--+.+.+..-.+. ..+.+ ++.+.+.
T Consensus 15 ~dl~~e~~~~~~I~vvPl~v~~~~~~y~D~--~i~~~~efy~~~~ 57 (282)
T 2g7z_A 15 ITIEPELIKALDITVVPLSVMIDSKLYSDN--DLKEEGHFLSLMK 57 (282)
T ss_dssp BCCCHHHHHHHTCEEECCEEEETTEEEEGG--GCCSTTHHHHHHH
T ss_pred CCCCHHHHHhCCeEEEEEEEEECCEEEecC--CCChHHHHHHHHH
Confidence 344677889999999999988843322222 23445 5555554
No 353
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=33.22 E-value=17 Score=16.69 Aligned_cols=13 Identities=0% Similarity=-0.227 Sum_probs=10.6
Q ss_pred CEEEEEeCCeEEe
Q psy11066 39 PTFVFVKSTAKVE 51 (70)
Q Consensus 39 Pt~~~~~~g~~~~ 51 (70)
|++.++++|+.+.
T Consensus 34 ~~v~W~k~g~~i~ 46 (93)
T 1waa_A 34 VHGQWKLKGQPLA 46 (93)
T ss_dssp CCCEEEETTEECC
T ss_pred CeEEEEECCEECc
Confidence 7889999998763
No 354
>2e7g_A Putative ribosome-binding factor A; RBFA, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.52.7.1
Probab=32.97 E-value=30 Score=17.56 Aligned_cols=19 Identities=21% Similarity=0.501 Sum_probs=16.0
Q ss_pred HHHHcCCCccCEEEEEeCC
Q psy11066 29 IAMAYDISSMPTFVFVKST 47 (70)
Q Consensus 29 ~~~~~~i~~~Pt~~~~~~g 47 (70)
+++..++..+|.+.|+.+.
T Consensus 89 l~~~l~lr~~PeL~F~~D~ 107 (129)
T 2e7g_A 89 LMSQQTLRNVPPIVFVQDK 107 (129)
T ss_dssp HHTCTTCSCCCCEEEEETT
T ss_pred HHhhcCCccCCeEEEEEcC
Confidence 5677899999999999764
No 355
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=32.80 E-value=44 Score=16.77 Aligned_cols=20 Identities=10% Similarity=0.235 Sum_probs=13.5
Q ss_pred HHHHcCCCccCEEEEEeCCeEE
Q psy11066 29 IAMAYDISSMPTFVFVKSTAKV 50 (70)
Q Consensus 29 ~~~~~~i~~~Pt~~~~~~g~~~ 50 (70)
+.+..|...+|+++ -+|+.+
T Consensus 62 l~~~~G~~tVP~If--I~G~~I 81 (127)
T 3l4n_A 62 IKLVTGRGTVPNLL--VNGVSR 81 (127)
T ss_dssp HHHHHSCCSSCEEE--ETTEEC
T ss_pred HHHHcCCCCcceEE--ECCEEE
Confidence 33445889999985 477543
No 356
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=32.61 E-value=32 Score=15.52 Aligned_cols=14 Identities=0% Similarity=0.107 Sum_probs=11.0
Q ss_pred ccCEEEEEeCCeEE
Q psy11066 37 SMPTFVFVKSTAKV 50 (70)
Q Consensus 37 ~~Pt~~~~~~g~~~ 50 (70)
-.|++.++++|+.+
T Consensus 36 p~p~i~W~k~~~~~ 49 (103)
T 3qp3_A 36 PTAEVKWYHNGVEL 49 (103)
T ss_dssp SCCEEEEEETTEEC
T ss_pred CCCEEEEEECCEEC
Confidence 35789999999765
No 357
>3u5e_Y L33, YL33, 60S ribosomal protein L26-A; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 2wwa_L 2ww9_L 2wwb_L 3o5h_X 3o58_X 3u5i_Y 4b6a_Y 1s1i_U 3izc_Y 3izs_Y 3jyw_U
Probab=32.21 E-value=26 Score=18.10 Aligned_cols=15 Identities=27% Similarity=0.625 Sum_probs=12.6
Q ss_pred CcHHHHHHcCCCccC
Q psy11066 25 ESEDIAMAYDISSMP 39 (70)
Q Consensus 25 ~~~~~~~~~~i~~~P 39 (70)
-..+|-++|+++++|
T Consensus 35 LSkeLr~ky~vrs~~ 49 (127)
T 3u5e_Y 35 LSKELRAQYGIKALP 49 (127)
T ss_dssp BCHHHHHHHTCCEEE
T ss_pred CCHHHHHHhCcCccc
Confidence 357889999999987
No 358
>3nyi_A FAT acid-binding protein; stearic acid, DEGV family protein, structural genomics, PSI- protein structure initiative; HET: STE; 1.90A {Eubacterium ventriosum} SCOP: c.119.1.0
Probab=31.87 E-value=38 Score=19.66 Aligned_cols=43 Identities=16% Similarity=0.157 Sum_probs=28.3
Q ss_pred CcCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC--CHHHHHHHHHh
Q psy11066 23 VDESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA--NFDKLRSTVLA 67 (70)
Q Consensus 23 ~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~--~~~~l~~~i~~ 67 (70)
+|-.+++.++++|.-+|--+.+.+..-. ..|. +.+++.+++.+
T Consensus 13 ~dl~~e~~~~~~I~vvPl~v~~~~~~y~--~D~~di~~~efy~~~~~ 57 (297)
T 3nyi_A 13 CDLSKEYLEKHDVTIVPLSVSFDGETYY--RDGVDITRDECYQRMVD 57 (297)
T ss_dssp GCCCHHHHHHHTEEEECCEEESSSSCEE--EBTTTBCHHHHHHHHHH
T ss_pred CCCCHHHHHhCCeEEEEEEEEECCEEEe--cCCCCCCHHHHHHHHHh
Confidence 4446788999999999998888433220 2332 66777666643
No 359
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=31.46 E-value=35 Score=15.21 Aligned_cols=14 Identities=14% Similarity=0.408 Sum_probs=10.8
Q ss_pred cCEEEEEeCCeEEe
Q psy11066 38 MPTFVFVKSTAKVE 51 (70)
Q Consensus 38 ~Pt~~~~~~g~~~~ 51 (70)
.|++.++++|..+.
T Consensus 34 ~p~v~W~k~~~~~~ 47 (99)
T 1u2h_A 34 KPVVSWLRNRQPVR 47 (99)
T ss_dssp CCEEEEEETTEECC
T ss_pred CCEEEEEECCEECC
Confidence 47899999997653
No 360
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=30.72 E-value=36 Score=15.10 Aligned_cols=13 Identities=23% Similarity=0.455 Sum_probs=10.4
Q ss_pred cCEEEEEeCCeEE
Q psy11066 38 MPTFVFVKSTAKV 50 (70)
Q Consensus 38 ~Pt~~~~~~g~~~ 50 (70)
.|++.++++|+.+
T Consensus 35 ~p~v~W~~~g~~~ 47 (99)
T 3puc_A 35 RPTAIWTKDGKAI 47 (99)
T ss_dssp CCEEEEEETTEEC
T ss_pred CCEEEEEECCEEC
Confidence 4789999998765
No 361
>3eik_A Tata-box-binding protein; DNA-binding, initiation factor, nucleus, transcription; 1.90A {Encephalitozoon cuniculi} PDB: 3oci_A 3oc3_C
Probab=30.62 E-value=53 Score=18.52 Aligned_cols=27 Identities=22% Similarity=0.115 Sum_probs=15.8
Q ss_pred EEEEEeCCeEEeeeeCC-CHHHHHHHHHhh
Q psy11066 40 TFVFVKSTAKVEQFSGA-NFDKLRSTVLAN 68 (70)
Q Consensus 40 t~~~~~~g~~~~~~~g~-~~~~l~~~i~~~ 68 (70)
|+.+|..|+.+- .|. +.+++...+.+.
T Consensus 90 t~LIF~SGKiV~--TGAkS~e~a~~A~~ki 117 (218)
T 3eik_A 90 TALIFASGKMVI--TGAKSEKSSRMAAQRY 117 (218)
T ss_dssp EEEECTTSEEEE--EEESSHHHHHHHHHHH
T ss_pred EEEEECCCeEEE--EecCCHHHHHHHHHHH
Confidence 355566776553 456 777666655543
No 362
>1mp9_A Tata-binding protein; transcription regulation, DNA-binding protein, transcription factor, DNA binding protein; 2.00A {Sulfolobus acidocaldarius} SCOP: d.129.1.1 d.129.1.1
Probab=30.34 E-value=73 Score=17.56 Aligned_cols=27 Identities=33% Similarity=0.297 Sum_probs=17.7
Q ss_pred EEEEEeCCeEEeeeeCC-CHHHHHHHHHhh
Q psy11066 40 TFVFVKSTAKVEQFSGA-NFDKLRSTVLAN 68 (70)
Q Consensus 40 t~~~~~~g~~~~~~~g~-~~~~l~~~i~~~ 68 (70)
|+.+|..|+.+ ..|. +.+++...+.+.
T Consensus 60 t~lIF~SGKiv--~TGakS~e~a~~a~~~i 87 (198)
T 1mp9_A 60 TSLIFKSGKMV--VTGAKSTDELIKAVKRI 87 (198)
T ss_dssp EEEECTTSEEE--EECCSSHHHHHHHHHHH
T ss_pred EEEEeCCCeEE--EeccCCHHHHHHHHHHH
Confidence 56666777654 4577 888777666554
No 363
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.99 E-value=37 Score=15.92 Aligned_cols=15 Identities=27% Similarity=0.494 Sum_probs=11.3
Q ss_pred ccCEEEEEeCCeEEe
Q psy11066 37 SMPTFVFVKSTAKVE 51 (70)
Q Consensus 37 ~~Pt~~~~~~g~~~~ 51 (70)
-.|++.++++|+.+.
T Consensus 52 P~p~i~W~k~g~~l~ 66 (118)
T 2e7c_A 52 PRPQVVWTKGGAPLD 66 (118)
T ss_dssp SCCEEEEEETTEECC
T ss_pred CCCEEEEEECCEECC
Confidence 357799999997763
No 364
>2gv1_A Probable acylphosphatase; globular alpha-helix/beta-sheet protein, hydrolase; NMR {Escherichia coli}
Probab=29.96 E-value=50 Score=15.59 Aligned_cols=37 Identities=11% Similarity=0.019 Sum_probs=23.5
Q ss_pred HHHHHHcCCCccCEEEEEeCCeEEeeeeCC--CHHHHHHHH
Q psy11066 27 EDIAMAYDISSMPTFVFVKSTAKVEQFSGA--NFDKLRSTV 65 (70)
Q Consensus 27 ~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~--~~~~l~~~i 65 (70)
..+|.++++.++ +.=..+|.+.....|. ..+.+.++|
T Consensus 24 ~~~A~~lgL~G~--V~N~~dG~Vei~~eG~~~~i~~f~~~l 62 (92)
T 2gv1_A 24 QYEAKRLGLTGY--AKNLDDGSVEVVACGEEGQVEKLMQWL 62 (92)
T ss_dssp HHHHHHHTCCCE--EEECSSSCEEEEECSCHHHHHHHHHHH
T ss_pred HHHHHHcCCeEE--EEECCCCcEEEEEEeCHHHHHHHHHHh
Confidence 567899999995 2222467677777785 234455555
No 365
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=29.55 E-value=39 Score=14.92 Aligned_cols=14 Identities=14% Similarity=0.513 Sum_probs=10.9
Q ss_pred ccCEEEEEeCCeEE
Q psy11066 37 SMPTFVFVKSTAKV 50 (70)
Q Consensus 37 ~~Pt~~~~~~g~~~ 50 (70)
..|++.++++|+.+
T Consensus 31 p~p~i~W~~~~~~~ 44 (91)
T 3bfo_A 31 PIPHYQWFKNELPL 44 (91)
T ss_dssp SCCEEEEEETTEEC
T ss_pred CCCEEEEEcCCeeC
Confidence 45789999998764
No 366
>1ulr_A Putative acylphosphatase; hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: d.58.10.1
Probab=29.35 E-value=51 Score=15.44 Aligned_cols=38 Identities=8% Similarity=0.023 Sum_probs=23.8
Q ss_pred HHHHHHcCCCccCEEEEEeCCeEEeeeeCC--CHHHHHHHHH
Q psy11066 27 EDIAMAYDISSMPTFVFVKSTAKVEQFSGA--NFDKLRSTVL 66 (70)
Q Consensus 27 ~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~--~~~~l~~~i~ 66 (70)
..+|.++++.++ +.=-.+|.+.....|. ..+.+.++|.
T Consensus 22 ~~~A~~lgl~G~--V~N~~dG~Vei~~eG~~~~i~~f~~~l~ 61 (88)
T 1ulr_A 22 QKKALELGLSGY--AENLPDGRVEVVAEGPKEALELFLHHLK 61 (88)
T ss_dssp HHHHHHTTCEEE--EEECTTSCEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCeEE--EEECCCCcEEEEEEeCHHHHHHHHHHHH
Confidence 456888898885 2222567777777785 2345555554
No 367
>1w2i_A Acylphosphatase; hydrolase, thermophilic, stability, amyloid; 1.5A {Pyrococcus horikoshii} SCOP: d.58.10.1 PDB: 1v3z_A 2w4d_A
Probab=29.20 E-value=52 Score=15.53 Aligned_cols=28 Identities=7% Similarity=0.033 Sum_probs=17.0
Q ss_pred HHHHHHcCCCccCEEEEEeCCeEEeeeeCC
Q psy11066 27 EDIAMAYDISSMPTFVFVKSTAKVEQFSGA 56 (70)
Q Consensus 27 ~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~ 56 (70)
..+|.++++.++ +.=-.+|.+.....|.
T Consensus 24 ~~~A~~lgL~G~--V~N~~dG~Vei~~~G~ 51 (91)
T 1w2i_A 24 QREARKLGVNGW--VRNLPDGSVEAVLEGD 51 (91)
T ss_dssp HHHHHHHTCEEE--EEECTTSCEEEEEEEE
T ss_pred HHHHHHcCCeEE--EEECCCCCEEEEEEeC
Confidence 456778888874 2222467666666674
No 368
>2bjd_A Acylphosphatase; hyperthermophIle, hydrolase; 1.27A {Sulfolobus solfataricus} PDB: 2bje_A 1y9o_A
Probab=28.98 E-value=56 Score=15.82 Aligned_cols=37 Identities=14% Similarity=0.044 Sum_probs=22.7
Q ss_pred HHHHHHcCCCccCEEEEEeCCeEEeeeeCC--CHHHHHHHH
Q psy11066 27 EDIAMAYDISSMPTFVFVKSTAKVEQFSGA--NFDKLRSTV 65 (70)
Q Consensus 27 ~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~--~~~~l~~~i 65 (70)
..+|.++++.++ +.=..+|.+.....|. ..+.+.++|
T Consensus 34 ~~~A~~lgL~G~--V~N~~dG~Vei~~eG~~~~i~~f~~~l 72 (101)
T 2bjd_A 34 QIHAIRLGIKGY--AKNLPDGSVEVVAEGYEEALSKLLERI 72 (101)
T ss_dssp HHHHHHTTCEEE--EEECTTSCEEEEEEEEHHHHHHHHHHH
T ss_pred HHHHHHcCCeEE--EEECCCCcEEEEEEeCHHHHHHHHHHH
Confidence 567889999985 2222467676777774 234444444
No 369
>1d4b_A CIDE B, human cell death-inducing effector B; alpha/beta roll, apoptosis; NMR {Homo sapiens} SCOP: d.15.2.1
Probab=28.49 E-value=48 Score=16.98 Aligned_cols=24 Identities=13% Similarity=0.160 Sum_probs=17.9
Q ss_pred HHHHHcCCCccCEEEEEeCCeEEe
Q psy11066 28 DIAMAYDISSMPTFVFVKSTAKVE 51 (70)
Q Consensus 28 ~~~~~~~i~~~Pt~~~~~~g~~~~ 51 (70)
..++.+++....++++..+|.+++
T Consensus 62 K~~~~l~l~~~~~lvLeeDGT~Vd 85 (122)
T 1d4b_A 62 KALETLLLNGVLTLVLEEDGTAVD 85 (122)
T ss_dssp HHHHHHSCCSSCEEEETTTTEEEC
T ss_pred HHHHHhccCCCcEEEEEeCCcEEe
Confidence 346888996566777778998774
No 370
>1rm1_A Tata-box binding protein; yeast TFIIA, TBP protein, ATA-box DNA, transcription/DNA complex; 2.50A {Saccharomyces cerevisiae} SCOP: d.129.1.1 d.129.1.1
Probab=28.24 E-value=77 Score=18.11 Aligned_cols=35 Identities=17% Similarity=0.224 Sum_probs=19.7
Q ss_pred HcCCCccCEEE-----------EEeCCeEEeeeeCC-CHHHHHHHHHhh
Q psy11066 32 AYDISSMPTFV-----------FVKSTAKVEQFSGA-NFDKLRSTVLAN 68 (70)
Q Consensus 32 ~~~i~~~Pt~~-----------~~~~g~~~~~~~g~-~~~~l~~~i~~~ 68 (70)
.|+-...|-++ +|..|+.+ +.|. +.+++...++++
T Consensus 93 eYePe~Fpgli~Rl~~Pk~t~lIF~SGKiV--~TGaks~e~a~~A~~~i 139 (240)
T 1rm1_A 93 EYNPKRFAAVIMRIREPKTTALIFASGKMV--VTGAKSEDDSKLASRKY 139 (240)
T ss_dssp EECTTTCSEEEEEEETTEEEEEEETTSEEE--EEEESSHHHHHHHHHHH
T ss_pred EEcCcccceEEEEeCCCcEEEEEECCCeEE--EEecCCHHHHHHHHHHH
Confidence 56656666654 44445443 3466 777766665543
No 371
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=28.08 E-value=30 Score=16.11 Aligned_cols=14 Identities=14% Similarity=0.157 Sum_probs=10.9
Q ss_pred ccCEEEEEeCCeEE
Q psy11066 37 SMPTFVFVKSTAKV 50 (70)
Q Consensus 37 ~~Pt~~~~~~g~~~ 50 (70)
-.|++.++++|+.+
T Consensus 35 p~p~i~W~k~~~~~ 48 (114)
T 2cqv_A 35 QPITCTWMKFRKQI 48 (114)
T ss_dssp SSCEEEEEESSSBC
T ss_pred CCCEEEEEECCEEC
Confidence 35889999998764
No 372
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=27.64 E-value=44 Score=14.91 Aligned_cols=15 Identities=27% Similarity=0.554 Sum_probs=11.2
Q ss_pred ccCEEEEEeCCeEEe
Q psy11066 37 SMPTFVFVKSTAKVE 51 (70)
Q Consensus 37 ~~Pt~~~~~~g~~~~ 51 (70)
..|++.++++|..+.
T Consensus 36 p~p~v~W~~~~~~~~ 50 (100)
T 3caf_A 36 PMPTMRWLKNGKEFK 50 (100)
T ss_dssp SCCEEEEEETTEECC
T ss_pred CCCEEEEEECCEEcc
Confidence 357889999997654
No 373
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=27.40 E-value=45 Score=14.85 Aligned_cols=14 Identities=0% Similarity=0.033 Sum_probs=10.9
Q ss_pred ccCEEEEEeCCeEE
Q psy11066 37 SMPTFVFVKSTAKV 50 (70)
Q Consensus 37 ~~Pt~~~~~~g~~~ 50 (70)
..|++.++++|+.+
T Consensus 30 p~~~v~W~~~~~~~ 43 (97)
T 2bk8_A 30 QSTQVTWYFGVRQL 43 (97)
T ss_dssp TTCEEEEEETTEEC
T ss_pred CCCEEEEEECCEEC
Confidence 45789999998754
No 374
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=27.28 E-value=50 Score=14.66 Aligned_cols=15 Identities=7% Similarity=0.180 Sum_probs=11.8
Q ss_pred ccCEEEEEeCCeEEe
Q psy11066 37 SMPTFVFVKSTAKVE 51 (70)
Q Consensus 37 ~~Pt~~~~~~g~~~~ 51 (70)
+-|++.++++|..+.
T Consensus 27 ~~p~v~W~k~g~~~~ 41 (95)
T 4hwu_A 27 DAAVISWTKDGVHLG 41 (95)
T ss_dssp TTCEEEEEETTEEEC
T ss_pred CCCEEEEEECCEECC
Confidence 358999999997763
No 375
>1urr_A CG18505 protein; acylphosphatase, enzyme; 1.5A {Drosophila melanogaster} SCOP: d.58.10.1
Probab=27.18 E-value=61 Score=15.65 Aligned_cols=38 Identities=8% Similarity=0.067 Sum_probs=24.3
Q ss_pred HHHHHHcCCCccCEEEEEeCCeEEeeeeCC--CHHHHHHHHH
Q psy11066 27 EDIAMAYDISSMPTFVFVKSTAKVEQFSGA--NFDKLRSTVL 66 (70)
Q Consensus 27 ~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~--~~~~l~~~i~ 66 (70)
..+|.++++.++ +.=..+|.+.....|. ..+.+.++|.
T Consensus 31 ~~~A~~lgL~G~--V~N~~dG~Vei~~eG~~~~l~~f~~~l~ 70 (102)
T 1urr_A 31 SHEAKRLGVRGW--CMNTRDGTVKGQLEAPMMNLMEMKHWLE 70 (102)
T ss_dssp HHHHHHHTCEEE--EEECTTSCEEEEEEECHHHHHHHHHHHH
T ss_pred HHHHHHhCCcEE--EEECCCCCEEEEEEcCHHHHHHHHHHHH
Confidence 567889999985 2222467677777785 2355555554
No 376
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=27.14 E-value=44 Score=15.51 Aligned_cols=15 Identities=33% Similarity=0.527 Sum_probs=11.4
Q ss_pred ccCEEEEEeCCeEEe
Q psy11066 37 SMPTFVFVKSTAKVE 51 (70)
Q Consensus 37 ~~Pt~~~~~~g~~~~ 51 (70)
-.|++.++++|+.+.
T Consensus 37 P~p~v~W~k~~~~~~ 51 (117)
T 2v9t_A 37 PTPTIEWYKGGERVE 51 (117)
T ss_dssp SCCEEEEEETTEECC
T ss_pred CCCeEEEEECCEecc
Confidence 457889999987654
No 377
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.85 E-value=50 Score=14.74 Aligned_cols=15 Identities=13% Similarity=0.355 Sum_probs=11.5
Q ss_pred ccCEEEEEeCCeEEe
Q psy11066 37 SMPTFVFVKSTAKVE 51 (70)
Q Consensus 37 ~~Pt~~~~~~g~~~~ 51 (70)
-.|++.++++|+.+.
T Consensus 36 p~p~v~W~~~~~~~~ 50 (100)
T 2edj_A 36 PLPVISWLKEGFTFP 50 (100)
T ss_dssp SCCEEEEEESSSEES
T ss_pred CCCEEEEEECCEECC
Confidence 357889999987664
No 378
>2vh7_A Acylphosphatase-1; hydrolase, acetylation; 1.45A {Homo sapiens} PDB: 2w4c_A 2w4p_A 2k7k_A 2k7j_A 2acy_A
Probab=26.54 E-value=62 Score=15.51 Aligned_cols=38 Identities=5% Similarity=0.029 Sum_probs=24.1
Q ss_pred HHHHHHcCCCccCEEEEEeCCeEEeeeeCC--CHHHHHHHHH
Q psy11066 27 EDIAMAYDISSMPTFVFVKSTAKVEQFSGA--NFDKLRSTVL 66 (70)
Q Consensus 27 ~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~--~~~~l~~~i~ 66 (70)
..+|.++++.++ +.=..+|.+.....|. ..+.+.++|.
T Consensus 28 ~~~A~~lgL~G~--V~N~~dG~Vei~~eG~~~~v~~f~~~l~ 67 (99)
T 2vh7_A 28 QAEGKKLGLVGW--VQNTDRGTVQGQLQGPISKVRHMQEWLE 67 (99)
T ss_dssp HHHHHHTTCEEE--EEECTTSCEEEEEEEEHHHHHHHHHHHH
T ss_pred HHHHHHcCCcEE--EEECCCCCEEEEEEcCHHHHHHHHHHHH
Confidence 567889999985 2222467677777785 2455666654
No 379
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=26.23 E-value=48 Score=14.59 Aligned_cols=13 Identities=15% Similarity=0.304 Sum_probs=10.4
Q ss_pred cCEEEEEeCCeEE
Q psy11066 38 MPTFVFVKSTAKV 50 (70)
Q Consensus 38 ~Pt~~~~~~g~~~ 50 (70)
.|++.++++|+.+
T Consensus 34 ~p~v~W~~~~~~~ 46 (100)
T 3irg_A 34 TPEVTWSCGGRKI 46 (100)
T ss_dssp CCEEEEEETTEEC
T ss_pred CCceEEEECCEEe
Confidence 4789999998765
No 380
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=25.55 E-value=50 Score=14.89 Aligned_cols=14 Identities=21% Similarity=0.392 Sum_probs=10.7
Q ss_pred ccCEEEEEeCCeEE
Q psy11066 37 SMPTFVFVKSTAKV 50 (70)
Q Consensus 37 ~~Pt~~~~~~g~~~ 50 (70)
..|++.++++|+.+
T Consensus 41 p~p~i~W~~~~~~~ 54 (107)
T 3irg_B 41 PPPVVVWEKGGQQL 54 (107)
T ss_dssp SCCEEEEEETTEEC
T ss_pred CCCEEEEEECCeEC
Confidence 34689999998765
No 381
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=25.12 E-value=76 Score=16.09 Aligned_cols=44 Identities=9% Similarity=0.207 Sum_probs=26.0
Q ss_pred HHHHHHHhhCCCcEEEEEeCcCcHHHH----HHcCCCccCEEEEEeCC
Q psy11066 4 VMLQELASEFPDVVFLKVDVDESEDIA----MAYDISSMPTFVFVKST 47 (70)
Q Consensus 4 p~~~~~~~~~~~i~~~~vd~~~~~~~~----~~~~i~~~Pt~~~~~~g 47 (70)
.-+.++-+.|+.+.++.+-.+...++. ....-+++-.+++|+|.
T Consensus 66 enireiwerypqldvvvivttddkewikdfieeakergvevfvvynnk 113 (162)
T 2l82_A 66 ENIREIWERYPQLDVVVIVTTDDKEWIKDFIEEAKERGVEVFVVYNNK 113 (162)
T ss_dssp HHHHHHHHHCTTCCEEEEEECCCHHHHHHHHHHHHHTTCEEEEEEECS
T ss_pred HHHHHHHHhCCCCcEEEEEecCcHHHHHHHHHHHHhcCcEEEEEecCC
Confidence 345566677887555554444444332 33345688888998654
No 382
>1aps_A Acylphosphatase; hydrolase(acting on acid anhydrides); NMR {Equus caballus} SCOP: d.58.10.1
Probab=24.87 E-value=67 Score=15.34 Aligned_cols=37 Identities=19% Similarity=0.102 Sum_probs=21.5
Q ss_pred HHHHHHcCCCccCEEEEEeCCeEEeeeeCCCHHHHHHHHH
Q psy11066 27 EDIAMAYDISSMPTFVFVKSTAKVEQFSGANFDKLRSTVL 66 (70)
Q Consensus 27 ~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~l~~~i~ 66 (70)
..+|.++++.++ +.=..+|.+.....|. .+.+.+++.
T Consensus 27 ~~~A~~lgL~G~--V~N~~dG~Vei~~eG~-~~~l~~f~~ 63 (98)
T 1aps_A 27 EDEARKIGVVGW--VKNTSKGTVTGQVQGP-EEKVNSMKS 63 (98)
T ss_dssp HHHHHHHTCEEE--EECCTTCEEEEEEEEE-HHHHHHHHH
T ss_pred HHHHHHcCCeEE--EEECCCCcEEEEEEeC-HHHHHHHHH
Confidence 567888888884 1111356666666674 444555544
No 383
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=24.72 E-value=32 Score=15.58 Aligned_cols=14 Identities=7% Similarity=0.112 Sum_probs=11.0
Q ss_pred ccCEEEEEeCCeEE
Q psy11066 37 SMPTFVFVKSTAKV 50 (70)
Q Consensus 37 ~~Pt~~~~~~g~~~ 50 (70)
..|++.+|++|+.+
T Consensus 35 p~~~v~W~k~g~~i 48 (100)
T 2yuv_A 35 PKLEVKWYKNGQEI 48 (100)
T ss_dssp TTSCEEEEESSCBC
T ss_pred CCceEEEEECCEEC
Confidence 46789999998765
No 384
>3s99_A Basic membrane lipoprotein; ssgcid, structural genomics, SEA structural genomics center for infectious disease, adenine; HET: ADE; 2.05A {Brucella melitensis biovar abortus}
Probab=24.54 E-value=75 Score=18.88 Aligned_cols=22 Identities=27% Similarity=0.323 Sum_probs=16.9
Q ss_pred hHHHHHHHhhCCCcEEEEEeCc
Q psy11066 3 LVMLQELASEFPDVVFLKVDVD 24 (70)
Q Consensus 3 ~p~~~~~~~~~~~i~~~~vd~~ 24 (70)
...+.+++++|+++.|+.+|..
T Consensus 98 ~~~~~~vA~~~Pdv~fv~id~~ 119 (356)
T 3s99_A 98 MDPTVKVAKKFPDVKFEHATGY 119 (356)
T ss_dssp HHHHHHHHTTCTTSEEEEESCC
T ss_pred HHHHHHHHHHCCCCEEEEEecc
Confidence 4557778888999888888754
No 385
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.47 E-value=31 Score=16.19 Aligned_cols=15 Identities=0% Similarity=0.064 Sum_probs=11.4
Q ss_pred ccCEEEEEeCCeEEe
Q psy11066 37 SMPTFVFVKSTAKVE 51 (70)
Q Consensus 37 ~~Pt~~~~~~g~~~~ 51 (70)
..|++.+|++|+.+.
T Consensus 41 p~p~v~W~k~g~~l~ 55 (115)
T 2cr6_A 41 NYEPVHWFLDKTPLH 55 (115)
T ss_dssp TCCSCEEEESSCEEC
T ss_pred CCCccEEEECCEECC
Confidence 346799999997764
No 386
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.36 E-value=31 Score=15.61 Aligned_cols=14 Identities=14% Similarity=0.237 Sum_probs=11.1
Q ss_pred ccCEEEEEeCCeEE
Q psy11066 37 SMPTFVFVKSTAKV 50 (70)
Q Consensus 37 ~~Pt~~~~~~g~~~ 50 (70)
..|++.++++|+.+
T Consensus 38 p~~~v~W~k~g~~~ 51 (102)
T 2eo1_A 38 AQTEVTWYKDGKKL 51 (102)
T ss_dssp SSSCCEEEETTEEC
T ss_pred CCCceEEEECCEEC
Confidence 45889999999765
No 387
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=24.32 E-value=31 Score=15.74 Aligned_cols=12 Identities=8% Similarity=0.285 Sum_probs=10.1
Q ss_pred CEEEEEeCCeEE
Q psy11066 39 PTFVFVKSTAKV 50 (70)
Q Consensus 39 Pt~~~~~~g~~~ 50 (70)
|++.++++|+.+
T Consensus 36 ~~v~W~k~g~~l 47 (103)
T 1x44_A 36 ANVKWFKNGEEI 47 (103)
T ss_dssp CCCEEEETTEEC
T ss_pred CeEEEEECCEEC
Confidence 889999999765
No 388
>2lxf_A Uncharacterized protein; beaver fever, giardiasis, seattle structural genomics center infectious disease, ssgcid, structural genomics; NMR {Giardia lamblia}
Probab=23.98 E-value=81 Score=15.97 Aligned_cols=36 Identities=11% Similarity=0.099 Sum_probs=23.8
Q ss_pred HHHHHHcCCCccCEEEEE--eCCeEEeeeeCC--CHHHHHHHHH
Q psy11066 27 EDIAMAYDISSMPTFVFV--KSTAKVEQFSGA--NFDKLRSTVL 66 (70)
Q Consensus 27 ~~~~~~~~i~~~Pt~~~~--~~g~~~~~~~g~--~~~~l~~~i~ 66 (70)
..+|.++++.++ +- .+|.+.....|. ..+.+.++|.
T Consensus 54 ~~~A~~lgL~G~----VrN~~dG~Vei~~eG~~~~v~~f~~~l~ 93 (121)
T 2lxf_A 54 KKEADALSLVGY----VTNNEDGSVSGVVQGPKEQVDAFVKYLH 93 (121)
T ss_dssp HHHHHHHTCEEE----EEECTTSCEEEEEEEEHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEE----EEECCCCCEEEEEEECHHHHHHHHHHHH
Confidence 567899999984 33 367777777785 3455555554
No 389
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.89 E-value=23 Score=16.13 Aligned_cols=13 Identities=8% Similarity=0.340 Sum_probs=10.4
Q ss_pred CEEEEEeCCeEEe
Q psy11066 39 PTFVFVKSTAKVE 51 (70)
Q Consensus 39 Pt~~~~~~g~~~~ 51 (70)
|++.+|++|+.+.
T Consensus 37 ~~v~W~k~g~~i~ 49 (101)
T 2edk_A 37 AQVMWMKNGVELT 49 (101)
T ss_dssp CCCEEEESSCBCC
T ss_pred CEEEEEECCEECC
Confidence 8899999987653
No 390
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.39 E-value=38 Score=15.55 Aligned_cols=14 Identities=14% Similarity=0.403 Sum_probs=10.7
Q ss_pred cCEEEEEeCCeEEe
Q psy11066 38 MPTFVFVKSTAKVE 51 (70)
Q Consensus 38 ~Pt~~~~~~g~~~~ 51 (70)
-|++.++++|+.+.
T Consensus 37 ~p~v~W~k~g~~~~ 50 (110)
T 2dm2_A 37 KPKIYWFKDGKQIS 50 (110)
T ss_dssp CCEEEEECSSCBCC
T ss_pred CCEEEEEECCEECC
Confidence 57899999887653
No 391
>2fki_A Protein YJBR; NESG, GFT-alpha-beta, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; NMR {Escherichia coli} SCOP: d.198.3.1
Probab=23.38 E-value=31 Score=17.34 Aligned_cols=43 Identities=14% Similarity=0.073 Sum_probs=24.6
Q ss_pred cCcHHHHHHcC-CCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHhh
Q psy11066 24 DESEDIAMAYD-ISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLAN 68 (70)
Q Consensus 24 ~~~~~~~~~~~-i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~~ 68 (70)
+....+.+.++ | .|...+-+.+=......|. +.+.|.++|+..
T Consensus 55 e~~~~L~~~~~~i--~PayhmnK~hWisv~ld~~v~~~~l~~lI~~S 99 (126)
T 2fki_A 55 ELAELLRQQHSDV--RPSRHLNKAHWSTVYLDGSLPDSQIYYLVDAS 99 (126)
T ss_dssp HHHHHHHHSCSTT--CCCCSSCTTTEEEEECTTTSCHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCe--ecCCcCCCceeEEEEcCCCCCHHHHHHHHHHH
Confidence 34455666665 4 3544433443344445566 888898888753
No 392
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=23.33 E-value=44 Score=17.12 Aligned_cols=14 Identities=14% Similarity=0.204 Sum_probs=11.9
Q ss_pred cCEEEEEeCCeEEe
Q psy11066 38 MPTFVFVKSTAKVE 51 (70)
Q Consensus 38 ~Pt~~~~~~g~~~~ 51 (70)
-|++.++++|+.+.
T Consensus 133 ~p~i~W~k~g~~i~ 146 (186)
T 1jbj_A 133 DKTIKWLKDGSIIS 146 (186)
T ss_dssp CSCEEEEETTEECC
T ss_pred CCeEEEEECCEECc
Confidence 58999999998764
No 393
>2jsx_A Protein NAPD; TAT, proofreading, cytoplasm, chaperone; NMR {Escherichia coli K12} PDB: 2pq4_A
Probab=23.04 E-value=75 Score=15.25 Aligned_cols=47 Identities=13% Similarity=0.183 Sum_probs=30.8
Q ss_pred EEeCcCcHHHHHHcCCCccCEEEE--E-e-CCeEEeeeeCCCHHHHHHHHHhh
Q psy11066 20 KVDVDESEDIAMAYDISSMPTFVF--V-K-STAKVEQFSGANFDKLRSTVLAN 68 (70)
Q Consensus 20 ~vd~~~~~~~~~~~~i~~~Pt~~~--~-~-~g~~~~~~~g~~~~~l~~~i~~~ 68 (70)
.+......++++. +..+|-+-+ . . .|+.+....+.+.+.+.+.++++
T Consensus 13 ~~~p~~~~~V~~~--L~~ipgvEi~~~~~~~GkiVV~iEa~~~~~l~~~i~~I 63 (95)
T 2jsx_A 13 QAKSERISDISTQ--LNAFPGCEVAVSDAPSGQLIVVVEAEDSETLIQTIESV 63 (95)
T ss_dssp EECTTSHHHHHHH--HTTSTTEEEEEEETTTTEEEEEEEESSHHHHHHHHHHH
T ss_pred EECCCCHHHHHHH--HHCCCCeEEEEecCCCCCEEEEEEeCCHHHHHHHHHHH
Confidence 3444555666665 344454433 2 2 68999999999888888877654
No 394
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=22.87 E-value=37 Score=15.80 Aligned_cols=16 Identities=6% Similarity=0.212 Sum_probs=11.7
Q ss_pred CccCEEEEEeCCeEEe
Q psy11066 36 SSMPTFVFVKSTAKVE 51 (70)
Q Consensus 36 ~~~Pt~~~~~~g~~~~ 51 (70)
...|++.++++|+.+.
T Consensus 42 ~p~~~v~W~k~g~~l~ 57 (104)
T 1pd6_A 42 DHDAEVKWLKNGQEIQ 57 (104)
T ss_dssp SSSSCCEEEESSSEEC
T ss_pred CCCCEEEEEECCEECC
Confidence 3456788999997764
No 395
>2gmq_A Hypothetical protein EF0006; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG, unknown function; HET: MSE; 1.76A {Enterococcus faecalis} SCOP: b.122.1.11
Probab=22.79 E-value=81 Score=15.57 Aligned_cols=17 Identities=18% Similarity=0.395 Sum_probs=14.6
Q ss_pred CCCccCEEEEEeCCeEE
Q psy11066 34 DISSMPTFVFVKSTAKV 50 (70)
Q Consensus 34 ~i~~~Pt~~~~~~g~~~ 50 (70)
+|.-+-++.+++||+.+
T Consensus 57 NI~EI~~i~iiKNGKsL 73 (118)
T 2gmq_A 57 NIQEITTLNIIKNGKSL 73 (118)
T ss_dssp TGGGCCEEEEEETTEEE
T ss_pred hceeeeeeeeecCCcEE
Confidence 67789999999999864
No 396
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=22.29 E-value=48 Score=18.15 Aligned_cols=13 Identities=15% Similarity=0.335 Sum_probs=11.0
Q ss_pred CEEEEEeCCeEEe
Q psy11066 39 PTFVFVKSTAKVE 51 (70)
Q Consensus 39 Pt~~~~~~g~~~~ 51 (70)
||+.+|+||+++.
T Consensus 129 lti~Wlk~~~~L~ 141 (210)
T 1gsm_A 129 LSFSLLVGGQELE 141 (210)
T ss_dssp EEEEEEETTEECT
T ss_pred cEEEEEECCEEcc
Confidence 4999999998874
No 397
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=22.22 E-value=60 Score=16.11 Aligned_cols=13 Identities=23% Similarity=0.414 Sum_probs=10.4
Q ss_pred cCEEEEEeCCeEE
Q psy11066 38 MPTFVFVKSTAKV 50 (70)
Q Consensus 38 ~Pt~~~~~~g~~~ 50 (70)
.|++.++++|+.+
T Consensus 70 ~p~v~W~k~g~~~ 82 (154)
T 1fhg_A 70 DPEVMWFKDDNPV 82 (154)
T ss_dssp CCEEEEEETTEEC
T ss_pred CCEEEEEECCEEC
Confidence 4789999998765
No 398
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=21.95 E-value=44 Score=14.92 Aligned_cols=12 Identities=0% Similarity=0.307 Sum_probs=9.8
Q ss_pred CEEEEEeCCeEE
Q psy11066 39 PTFVFVKSTAKV 50 (70)
Q Consensus 39 Pt~~~~~~g~~~ 50 (70)
|++.++++|+.+
T Consensus 38 p~i~W~k~g~~~ 49 (95)
T 2ckn_A 38 QSINWLRDGVQL 49 (95)
T ss_dssp CEEEEEBTTBCC
T ss_pred CceEEEECCEec
Confidence 789999998755
No 399
>2v2f_A Penicillin binding protein 1A; transpeptidase activity, peptidoglycan synthesis, transferase, hydrolase; HET: MES; 1.9A {Streptococcus pneumoniae} PDB: 2zc5_A* 2zc6_A*
Probab=21.73 E-value=41 Score=11.73 Aligned_cols=17 Identities=0% Similarity=0.196 Sum_probs=11.8
Q ss_pred ccCEEEEEeCCeEEeee
Q psy11066 37 SMPTFVFVKSTAKVEQF 53 (70)
Q Consensus 37 ~~Pt~~~~~~g~~~~~~ 53 (70)
..||.++=++|+.+...
T Consensus 4 ~~ss~IYD~~g~~i~~l 20 (26)
T 2v2f_A 4 TTSSKIYDNKNQLIADL 20 (26)
T ss_pred CCCCEEEeCCCCEeeec
Confidence 34555555899988876
No 400
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=21.56 E-value=92 Score=15.76 Aligned_cols=13 Identities=0% Similarity=0.107 Sum_probs=11.0
Q ss_pred CEEEEEeCCeEEe
Q psy11066 39 PTFVFVKSTAKVE 51 (70)
Q Consensus 39 Pt~~~~~~g~~~~ 51 (70)
|++.++++|+.+.
T Consensus 125 p~i~W~~~g~~l~ 137 (176)
T 1hng_A 125 VELKLYQGKEHLR 137 (176)
T ss_dssp CEEEEEETTEEEE
T ss_pred cEEEEEECCEECC
Confidence 8999999998764
No 401
>1pa4_A Probable ribosome-binding factor A; structural genomics, distant homology, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Mycoplasma pneumoniae} SCOP: d.52.7.1
Probab=21.53 E-value=34 Score=17.04 Aligned_cols=20 Identities=20% Similarity=0.212 Sum_probs=16.4
Q ss_pred HHHHHcCCCccCEEEEEeCC
Q psy11066 28 DIAMAYDISSMPTFVFVKST 47 (70)
Q Consensus 28 ~~~~~~~i~~~Pt~~~~~~g 47 (70)
.+++..++..+|.+.|..+.
T Consensus 76 ~l~~~l~lr~~PeL~F~~D~ 95 (116)
T 1pa4_A 76 VLAHNLYLAKAVQIHFVKDK 95 (116)
T ss_dssp HHHTTCCCGGGCCCEECSSS
T ss_pred HHHhhcCCccCCeEEEEECC
Confidence 36778899999999998654
No 402
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.32 E-value=47 Score=15.47 Aligned_cols=14 Identities=29% Similarity=0.484 Sum_probs=10.7
Q ss_pred cCEEEEEeCCeEEe
Q psy11066 38 MPTFVFVKSTAKVE 51 (70)
Q Consensus 38 ~Pt~~~~~~g~~~~ 51 (70)
.|++.++++|+.+.
T Consensus 37 ~p~i~W~k~g~~~~ 50 (118)
T 2eo9_A 37 VPTILWRKDGVLVS 50 (118)
T ss_dssp CCEEEEEESSSBCC
T ss_pred CCEEEEEECCEECc
Confidence 47899999987653
No 403
>1txj_A Translationally controlled tumour-associated protein (TCTP) from plasmodium knowlesi,...; structural genomics consortium, SGC; 2.00A {Plasmodium knowlesi} SCOP: b.88.1.2 PDB: 3p3k_A
Probab=21.09 E-value=67 Score=17.43 Aligned_cols=14 Identities=21% Similarity=0.446 Sum_probs=11.4
Q ss_pred ccCEEEEEeCCeEE
Q psy11066 37 SMPTFVFVKSTAKV 50 (70)
Q Consensus 37 ~~Pt~~~~~~g~~~ 50 (70)
..|++++|++|-.-
T Consensus 155 ~tP~~~f~K~GL~e 168 (171)
T 1txj_A 155 VTPRFVYISDGLYE 168 (171)
T ss_dssp SSCEEEEEGGGEEE
T ss_pred CCeEEEEEccccee
Confidence 67999999998543
No 404
>2a1v_A Conserved hypothetical protein; structural genomics, PSI, protein structure initiative; 2.15A {Deinococcus radiodurans} SCOP: d.198.3.1
Probab=21.05 E-value=23 Score=18.36 Aligned_cols=44 Identities=16% Similarity=0.173 Sum_probs=23.0
Q ss_pred cCcHHHHHHcCCCccCEEEEEeCCeEEeeeeCC-CHHHHHHHHHh
Q psy11066 24 DESEDIAMAYDISSMPTFVFVKSTAKVEQFSGA-NFDKLRSTVLA 67 (70)
Q Consensus 24 ~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~i~~ 67 (70)
++...+.+.++-.-.|...+=+.+=......|. +.+.|.++|+.
T Consensus 66 e~~~~L~~~~~~~i~PayhmnK~hWvsV~Ld~~v~~~el~elI~~ 110 (144)
T 2a1v_A 66 ERGEELRQAHPQSIAPGYHLNKKHWVTVTLDGTVPAELLGELLRG 110 (144)
T ss_dssp HHHHHHHHHSTTTEEECTTSCTTTEEEEECSSSSCHHHHHHHHHH
T ss_pred HHHHHHHhcCCCeEecCCccCCCeEEEEEcCCCCCHHHHHHHHHH
Confidence 334455566640113433222233234455566 88899998875
No 405
>3trg_A Acylphosphatase; fatty acid and phospholipid metabolism, hydrolase; 1.60A {Coxiella burnetii}
Probab=20.78 E-value=85 Score=15.05 Aligned_cols=37 Identities=8% Similarity=-0.063 Sum_probs=21.7
Q ss_pred HHHHHHcCCCccCEEEEEeCCeEEeeeeCCCHHHHHHHHH
Q psy11066 27 EDIAMAYDISSMPTFVFVKSTAKVEQFSGANFDKLRSTVL 66 (70)
Q Consensus 27 ~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~l~~~i~ 66 (70)
..+|.++++.++ +.=..+|.+.....|. .+.+..++.
T Consensus 32 ~~~A~~lgL~G~--VrN~~dG~Vei~~eG~-~~~l~~f~~ 68 (98)
T 3trg_A 32 RKKAEELQLTGW--VKNLSHGDVELVACGE-RDSIMILTE 68 (98)
T ss_dssp HHHHHHTTCEEE--EEECTTSCEEEEEEEE-HHHHHHHHH
T ss_pred HHHHHHcCCeEE--EEECCCCEEEEEEEEC-HHHHHHHHH
Confidence 467888898884 2211456666667774 444444443
No 406
>2r2c_A 28 kDa outer membrane protein OMP28; lipoprotein, structural genomics, PSI, MCSG, protein initiative; 1.80A {Porphyromonas gingivalis}
Probab=20.78 E-value=21 Score=19.27 Aligned_cols=24 Identities=4% Similarity=0.235 Sum_probs=0.0
Q ss_pred CcHHHHHHcCCCc-cCEEEEEeCCe
Q psy11066 25 ESEDIAMAYDISS-MPTFVFVKSTA 48 (70)
Q Consensus 25 ~~~~~~~~~~i~~-~Pt~~~~~~g~ 48 (70)
.-......|++.+ +|+.++=+.+.
T Consensus 4 ~g~~y~~~~~~~g~~P~~~vNR~~~ 28 (183)
T 2r2c_A 4 AGDAYYSKFANNTPLPALMVSRKKF 28 (183)
T ss_dssp -------------------------
T ss_pred hHHHHHHHHCCCCCCCEEEEeCCcc
Confidence 3455678889888 99998876553
No 407
>3c65_A Uvrabc system protein C; UVRC, endonuclease, nucleotide excision repair, DNA repair, RNAse H, cytoplasm, DNA damage, DNA excision; 1.90A {Bacillus stearothermophilus}
Probab=20.73 E-value=36 Score=19.24 Aligned_cols=45 Identities=11% Similarity=0.343 Sum_probs=28.7
Q ss_pred EEeCcCcHHHHHHcCCCccCEEEEEeCCeEE---------eeeeCC-CHHHHHHHHHh
Q psy11066 20 KVDVDESEDIAMAYDISSMPTFVFVKSTAKV---------EQFSGA-NFDKLRSTVLA 67 (70)
Q Consensus 20 ~vd~~~~~~~~~~~~i~~~Pt~~~~~~g~~~---------~~~~g~-~~~~l~~~i~~ 67 (70)
++.|.++ +.-.|...+=..++|.+|... ....|. +.+.+.+.+.+
T Consensus 16 rIE~fDi---Sh~~G~~~V~smVvf~~g~p~k~~YR~f~i~~~~g~DDya~m~Evl~R 70 (226)
T 3c65_A 16 RIEAFDN---SNIYGADPVSALVVFLDGKPAKKEYRKYKVKTVAGPNDYETMREVVRR 70 (226)
T ss_dssp EEEEEEE---EESSSSSCEEEEEEEETTEECGGGCEEEECCCCCTTCHHHHHHHHHHH
T ss_pred EEEEEEC---CccCCcCceEEEEEEeCCccChhhCceeecCCCCCCcHHHHHHHHHHH
Confidence 4444443 334566778888999999752 333465 67777777765
No 408
>1yz1_A Translationally controlled tumor protein; unknown function; 2.00A {Homo sapiens} SCOP: b.88.1.2 PDB: 2hr9_A 3ebm_A
Probab=20.69 E-value=58 Score=17.71 Aligned_cols=14 Identities=21% Similarity=0.479 Sum_probs=11.4
Q ss_pred ccCEEEEEeCCeEE
Q psy11066 37 SMPTFVFVKSTAKV 50 (70)
Q Consensus 37 ~~Pt~~~~~~g~~~ 50 (70)
..|++++|++|-.-
T Consensus 158 ~tP~~~f~K~GL~e 171 (174)
T 1yz1_A 158 VTPYMIFFKDGLEM 171 (174)
T ss_dssp SCEEEEEEGGGEEE
T ss_pred cCeEEEEEccccee
Confidence 67999999998543
No 409
>3hs2_A PHD protein, prevent HOST death protein; intrinsic disorder, DOC, toxin-anti antitoxin; 2.20A {Enterobacteria phage P1}
Probab=20.67 E-value=47 Score=14.12 Aligned_cols=28 Identities=4% Similarity=0.121 Sum_probs=16.7
Q ss_pred CccCEEEEEeCCeEEeeeeCC-CHHHHHHH
Q psy11066 36 SSMPTFVFVKSTAKVEQFSGA-NFDKLRST 64 (70)
Q Consensus 36 ~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~ 64 (70)
.+-|. ++-++|+........ ..+.|.+.
T Consensus 22 ~~e~v-~Itr~g~~~avlvs~~~y~~l~e~ 50 (58)
T 3hs2_A 22 AGEEV-EITRRGREPAVIVSKATFEAYKKA 50 (58)
T ss_dssp TTCCE-EEECTTSCCEEEEEHHHHHHHHHH
T ss_pred CCCcE-EEEECCCceEEEecHHHHHHHHHh
Confidence 44454 445778777776666 55555543
No 410
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=20.58 E-value=39 Score=15.11 Aligned_cols=15 Identities=0% Similarity=0.069 Sum_probs=11.2
Q ss_pred ccCEEEEEeCCeEEe
Q psy11066 37 SMPTFVFVKSTAKVE 51 (70)
Q Consensus 37 ~~Pt~~~~~~g~~~~ 51 (70)
.-|++.++++|+.+.
T Consensus 35 p~~~v~W~k~~~~l~ 49 (95)
T 2k1m_A 35 AGVKVRWQRGGSDIS 49 (95)
T ss_dssp SSCCCEEECSSSEEC
T ss_pred CCCeEEEEECCEECC
Confidence 357788999987653
No 411
>3f1j_A Matrix protein, GP18, P16; viral matrix protein, RNA binding, membrane binding, viruses, ssRNA negative-strand viruses, mononegavirales; HET: C5P; 2.65A {Borna disease virus}
Probab=20.54 E-value=53 Score=16.51 Aligned_cols=14 Identities=14% Similarity=0.202 Sum_probs=10.2
Q ss_pred HHcCCCccCEEEEE
Q psy11066 31 MAYDISSMPTFVFV 44 (70)
Q Consensus 31 ~~~~i~~~Pt~~~~ 44 (70)
.+-=+.++||+.+=
T Consensus 12 ~kvivpgwptlmle 25 (142)
T 3f1j_A 12 DKVIVPGWPTLMLE 25 (142)
T ss_dssp GGGCCTTSCEEEEE
T ss_pred CcEEecCCceeEEE
Confidence 34457899998864
No 412
>3kdv_A DDRB, DNA damage response B protein; anti-parallel beta-barrel, pentamer, DNA binding protein; HET: DNA; 2.80A {Deinococcus geothermalis} PDB: 4exw_A
Probab=20.41 E-value=21 Score=19.25 Aligned_cols=20 Identities=10% Similarity=0.252 Sum_probs=2.1
Q ss_pred ccCEEEEEeCCeEEeeeeCC
Q psy11066 37 SMPTFVFVKSTAKVEQFSGA 56 (70)
Q Consensus 37 ~~Pt~~~~~~g~~~~~~~g~ 56 (70)
.+-|++.|+.|+...++.+.
T Consensus 130 ~YVtLi~Frggkrqer~~~p 149 (184)
T 3kdv_A 130 EYVTLAIFRGGKRQERYAVP 149 (184)
T ss_dssp BCC-----------------
T ss_pred eEEEEEEEeCCceeeeeecC
Confidence 67789999999988887654
No 413
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=20.37 E-value=72 Score=14.96 Aligned_cols=15 Identities=13% Similarity=0.390 Sum_probs=11.3
Q ss_pred ccCEEEEEeCCeEEe
Q psy11066 37 SMPTFVFVKSTAKVE 51 (70)
Q Consensus 37 ~~Pt~~~~~~g~~~~ 51 (70)
-.|++.++++|+.+.
T Consensus 43 p~p~v~W~k~~~~~~ 57 (116)
T 2kkq_A 43 PPPKLFWKRNNEMVQ 57 (116)
T ss_dssp SCCEEEEEETTEECC
T ss_pred CCCEEEEEECCEECc
Confidence 357899999987654
No 414
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.17 E-value=53 Score=14.82 Aligned_cols=12 Identities=0% Similarity=0.307 Sum_probs=9.7
Q ss_pred CEEEEEeCCeEE
Q psy11066 39 PTFVFVKSTAKV 50 (70)
Q Consensus 39 Pt~~~~~~g~~~ 50 (70)
|++.++++|..+
T Consensus 32 p~i~W~k~g~~~ 43 (99)
T 2cr3_A 32 QSINWLRDGVQL 43 (99)
T ss_dssp CEEEEEESSSBC
T ss_pred CeEEEEECCEEC
Confidence 789999998654
No 415
>1h6q_A TCTP, P23FYP, translationally controlled tumor protein; tumor-associated protein, function unknown; NMR {Schizosaccharomyces pombe} SCOP: b.88.1.2 PDB: 1h7y_A
Probab=20.02 E-value=65 Score=17.42 Aligned_cols=15 Identities=20% Similarity=0.317 Sum_probs=11.6
Q ss_pred CccCEEEEEeCCeEE
Q psy11066 36 SSMPTFVFVKSTAKV 50 (70)
Q Consensus 36 ~~~Pt~~~~~~g~~~ 50 (70)
...|++++|++|-.-
T Consensus 151 g~tP~~~f~K~GL~e 165 (168)
T 1h6q_A 151 GITPYMIFFKDGLVS 165 (168)
T ss_dssp SSCEEEEEESTTCEE
T ss_pred CCCeEEEEEccccee
Confidence 367999999998543
Done!