Query psy1107
Match_columns 218
No_of_seqs 151 out of 1931
Neff 10.1
Searched_HMMs 29240
Date Fri Aug 16 17:15:40 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1107.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1107hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2gb4_A Thiopurine S-methyltran 99.8 1.5E-20 5E-25 145.3 12.1 140 42-189 30-191 (252)
2 4gek_A TRNA (CMO5U34)-methyltr 99.8 5.3E-20 1.8E-24 142.9 12.3 112 76-193 67-182 (261)
3 3dtn_A Putative methyltransfer 99.8 4.3E-19 1.5E-23 135.5 13.2 117 72-194 37-153 (234)
4 2a14_A Indolethylamine N-methy 99.8 7.4E-20 2.5E-24 142.4 7.9 147 43-190 16-198 (263)
5 4hg2_A Methyltransferase type 99.8 6.4E-19 2.2E-23 136.4 12.2 104 76-193 36-139 (257)
6 3lcc_A Putative methyl chlorid 99.8 1.1E-18 3.7E-23 133.4 13.1 141 44-193 32-175 (235)
7 3ggd_A SAM-dependent methyltra 99.8 9.1E-19 3.1E-23 134.6 11.5 122 69-194 46-168 (245)
8 1pjz_A Thiopurine S-methyltran 99.8 4.4E-19 1.5E-23 132.9 9.3 104 78-187 21-138 (203)
9 3ofk_A Nodulation protein S; N 99.8 2.2E-18 7.6E-23 129.9 13.1 109 75-191 47-156 (216)
10 2pxx_A Uncharacterized protein 99.8 1.8E-18 6.2E-23 130.0 12.5 141 44-194 6-164 (215)
11 3ujc_A Phosphoethanolamine N-m 99.8 2.7E-18 9.1E-23 133.3 13.6 113 76-194 52-164 (266)
12 3ou2_A SAM-dependent methyltra 99.8 1.9E-17 6.6E-22 124.7 16.5 114 69-192 36-149 (218)
13 2ex4_A Adrenal gland protein A 99.8 3.8E-18 1.3E-22 130.9 11.2 108 79-191 79-187 (241)
14 1xtp_A LMAJ004091AAA; SGPP, st 99.8 6.9E-18 2.4E-22 130.2 11.8 108 77-190 91-198 (254)
15 3hnr_A Probable methyltransfer 99.8 1.4E-17 4.6E-22 125.9 13.2 105 77-191 43-147 (220)
16 2p8j_A S-adenosylmethionine-de 99.8 5.3E-18 1.8E-22 127.1 10.8 115 75-194 19-133 (209)
17 3jwh_A HEN1; methyltransferase 99.8 7.7E-18 2.6E-22 127.1 11.7 110 77-190 27-142 (217)
18 3dli_A Methyltransferase; PSI- 99.8 4.6E-18 1.6E-22 130.4 10.1 109 75-194 37-145 (240)
19 3l8d_A Methyltransferase; stru 99.7 2.2E-17 7.5E-22 126.4 13.7 109 76-194 50-158 (242)
20 3e23_A Uncharacterized protein 99.7 1.2E-17 4.1E-22 125.5 12.0 113 67-191 31-143 (211)
21 3jwg_A HEN1, methyltransferase 99.7 9.1E-18 3.1E-22 126.9 11.2 110 77-190 27-142 (219)
22 2xvm_A Tellurite resistance pr 99.7 1.5E-17 5.1E-22 123.6 12.2 106 78-190 31-137 (199)
23 3h2b_A SAM-dependent methyltra 99.7 1.5E-17 5.1E-22 124.2 12.1 105 80-194 42-146 (203)
24 3dh0_A SAM dependent methyltra 99.7 5.7E-18 2E-22 127.9 9.8 112 76-193 34-147 (219)
25 3dlc_A Putative S-adenosyl-L-m 99.7 2.5E-17 8.5E-22 124.0 12.7 105 80-191 44-150 (219)
26 1vl5_A Unknown conserved prote 99.7 1.2E-17 4E-22 129.5 10.9 108 76-191 34-142 (260)
27 3sm3_A SAM-dependent methyltra 99.7 2.6E-17 8.9E-22 125.3 12.6 111 77-193 28-145 (235)
28 3mgg_A Methyltransferase; NYSG 99.7 9.1E-18 3.1E-22 131.2 10.1 109 76-190 34-143 (276)
29 2p7i_A Hypothetical protein; p 99.7 2.4E-17 8.1E-22 126.5 11.7 110 72-193 35-145 (250)
30 3g07_A 7SK snRNA methylphospha 99.7 1.2E-17 4.3E-22 131.7 9.8 112 78-189 45-220 (292)
31 3gu3_A Methyltransferase; alph 99.7 2.6E-17 8.9E-22 129.3 11.4 110 75-191 18-128 (284)
32 2yqz_A Hypothetical protein TT 99.7 7.2E-17 2.5E-21 125.0 13.7 105 76-188 36-140 (263)
33 1af7_A Chemotaxis receptor met 99.7 1.7E-16 5.7E-21 123.6 15.5 140 45-189 69-252 (274)
34 3g5t_A Trans-aconitate 3-methy 99.7 2.7E-17 9.1E-22 130.1 10.8 112 77-191 34-151 (299)
35 3pfg_A N-methyltransferase; N, 99.7 7.9E-17 2.7E-21 125.0 13.2 104 77-191 48-153 (263)
36 3f4k_A Putative methyltransfer 99.7 2.7E-17 9.3E-22 127.1 10.5 108 75-190 42-151 (257)
37 3kkz_A Uncharacterized protein 99.7 2.9E-17 1E-21 127.8 10.7 106 77-190 44-151 (267)
38 2i62_A Nicotinamide N-methyltr 99.7 1.2E-17 3.9E-22 129.7 8.0 146 44-190 18-199 (265)
39 3g5l_A Putative S-adenosylmeth 99.7 5.3E-17 1.8E-21 125.3 11.6 103 78-189 43-145 (253)
40 1xxl_A YCGJ protein; structura 99.7 4.3E-17 1.5E-21 124.9 10.9 110 75-192 17-127 (239)
41 1ve3_A Hypothetical protein PH 99.7 6.9E-17 2.4E-21 122.4 11.9 110 76-191 35-144 (227)
42 3ege_A Putative methyltransfer 99.7 7.5E-17 2.6E-21 125.2 12.2 103 77-193 32-134 (261)
43 2o57_A Putative sarcosine dime 99.7 7.9E-17 2.7E-21 127.2 12.5 110 76-192 79-190 (297)
44 2p35_A Trans-aconitate 2-methy 99.7 1.1E-16 3.6E-21 123.9 12.4 104 77-191 31-134 (259)
45 2kw5_A SLR1183 protein; struct 99.7 9.9E-17 3.4E-21 119.6 11.4 117 70-195 21-137 (202)
46 1nkv_A Hypothetical protein YJ 99.7 1.1E-16 3.6E-21 123.7 11.9 106 76-189 33-140 (256)
47 3m70_A Tellurite resistance pr 99.7 6.3E-17 2.2E-21 127.1 10.8 105 78-189 119-223 (286)
48 4fsd_A Arsenic methyltransfera 99.7 5.7E-17 2E-21 132.5 10.4 113 77-191 81-205 (383)
49 4htf_A S-adenosylmethionine-de 99.7 8.3E-17 2.8E-21 126.4 10.6 109 78-193 67-177 (285)
50 3thr_A Glycine N-methyltransfe 99.7 6.7E-17 2.3E-21 127.3 9.5 113 76-191 54-177 (293)
51 3bus_A REBM, methyltransferase 99.7 9.2E-17 3.2E-21 125.2 10.2 109 77-192 59-169 (273)
52 3orh_A Guanidinoacetate N-meth 99.7 7.6E-17 2.6E-21 123.4 9.4 108 77-189 58-170 (236)
53 1wzn_A SAM-dependent methyltra 99.7 9.6E-17 3.3E-21 123.7 9.9 104 78-188 40-144 (252)
54 2vdw_A Vaccinia virus capping 99.7 5.5E-17 1.9E-21 128.4 8.4 114 78-192 47-172 (302)
55 3hem_A Cyclopropane-fatty-acyl 99.7 1.4E-16 4.9E-21 126.1 10.8 112 76-195 69-189 (302)
56 3mti_A RRNA methylase; SAM-dep 99.7 1E-16 3.5E-21 118.0 9.2 113 76-193 19-139 (185)
57 3ocj_A Putative exported prote 99.7 9.5E-17 3.3E-21 127.3 9.6 115 75-194 114-232 (305)
58 3iv6_A Putative Zn-dependent a 99.7 2E-16 6.8E-21 122.2 10.9 106 76-189 42-148 (261)
59 1ri5_A MRNA capping enzyme; me 99.7 2.3E-16 7.8E-21 124.3 11.5 111 77-192 62-177 (298)
60 1zx0_A Guanidinoacetate N-meth 99.7 8E-17 2.7E-21 123.2 8.4 112 77-191 58-172 (236)
61 3dp7_A SAM-dependent methyltra 99.7 2.9E-16 9.8E-21 127.5 12.0 112 78-193 178-291 (363)
62 3vc1_A Geranyl diphosphate 2-C 99.7 1.3E-16 4.5E-21 126.9 9.8 110 77-194 115-226 (312)
63 1kpg_A CFA synthase;, cyclopro 99.7 2.3E-16 7.9E-21 123.9 11.0 110 77-194 62-173 (287)
64 3bkw_A MLL3908 protein, S-aden 99.7 7.5E-16 2.6E-20 117.9 13.6 106 76-190 40-145 (243)
65 1y8c_A S-adenosylmethionine-de 99.7 3.5E-16 1.2E-20 119.9 11.7 106 78-190 36-143 (246)
66 3bxo_A N,N-dimethyltransferase 99.7 3E-16 1E-20 119.8 11.3 104 78-192 39-144 (239)
67 2qe6_A Uncharacterized protein 99.7 4.4E-16 1.5E-20 121.6 12.4 114 78-192 76-199 (274)
68 3i9f_A Putative type 11 methyl 99.7 2.3E-16 7.8E-21 114.5 9.9 103 77-194 15-117 (170)
69 3ccf_A Cyclopropane-fatty-acyl 99.7 4.7E-16 1.6E-20 121.7 11.7 104 77-193 55-158 (279)
70 2gs9_A Hypothetical protein TT 99.7 4.1E-16 1.4E-20 117.0 10.6 102 78-194 35-137 (211)
71 3g2m_A PCZA361.24; SAM-depende 99.7 3E-16 1E-20 124.1 10.1 111 78-195 81-196 (299)
72 3e05_A Precorrin-6Y C5,15-meth 99.7 1.2E-15 4.1E-20 114.0 12.6 108 76-192 37-145 (204)
73 2fk8_A Methoxy mycolic acid sy 99.7 5.2E-16 1.8E-20 123.7 11.3 110 77-194 88-199 (318)
74 1xdz_A Methyltransferase GIDB; 99.7 1E-15 3.5E-20 117.3 12.1 106 78-190 69-175 (240)
75 1vlm_A SAM-dependent methyltra 99.7 2.1E-15 7E-20 114.0 13.7 98 78-193 46-143 (219)
76 1jsx_A Glucose-inhibited divis 99.7 2.7E-15 9.1E-20 112.2 14.1 102 79-191 65-167 (207)
77 3d2l_A SAM-dependent methyltra 99.7 6.2E-16 2.1E-20 118.4 10.9 107 75-189 29-137 (243)
78 3e8s_A Putative SAM dependent 99.7 9.2E-16 3.1E-20 116.0 11.7 108 77-194 50-157 (227)
79 3fpf_A Mtnas, putative unchara 99.7 5.6E-15 1.9E-19 115.4 15.7 106 75-191 118-224 (298)
80 2g72_A Phenylethanolamine N-me 99.6 6.1E-16 2.1E-20 121.7 10.4 111 78-189 70-215 (289)
81 3dxy_A TRNA (guanine-N(7)-)-me 99.6 1.6E-16 5.4E-21 120.1 6.7 111 78-189 33-150 (218)
82 2fca_A TRNA (guanine-N(7)-)-me 99.6 6.1E-16 2.1E-20 116.5 9.6 110 78-189 37-153 (213)
83 3i53_A O-methyltransferase; CO 99.6 8.5E-16 2.9E-20 123.2 11.0 110 78-194 168-279 (332)
84 3fzg_A 16S rRNA methylase; met 99.6 7.9E-17 2.7E-21 117.3 4.4 112 71-189 41-152 (200)
85 1yzh_A TRNA (guanine-N(7)-)-me 99.6 1.2E-15 4.1E-20 114.9 11.0 110 78-189 40-156 (214)
86 3cgg_A SAM-dependent methyltra 99.6 2.5E-15 8.6E-20 110.9 11.8 105 77-191 44-149 (195)
87 3hm2_A Precorrin-6Y C5,15-meth 99.6 1.1E-15 3.8E-20 111.4 9.5 109 76-194 22-132 (178)
88 3eey_A Putative rRNA methylase 99.6 1.1E-15 3.6E-20 113.6 9.2 114 76-192 19-142 (197)
89 2r3s_A Uncharacterized protein 99.6 9.1E-16 3.1E-20 123.1 9.3 111 78-194 164-276 (335)
90 3p9n_A Possible methyltransfer 99.6 1.2E-15 4E-20 112.8 9.1 110 78-191 43-155 (189)
91 2aot_A HMT, histamine N-methyl 99.6 1.1E-15 3.7E-20 120.5 9.4 110 78-191 51-174 (292)
92 2b3t_A Protein methyltransfera 99.6 4.9E-16 1.7E-20 121.6 7.0 107 78-189 108-238 (276)
93 3gwz_A MMCR; methyltransferase 99.6 2.4E-15 8.1E-20 122.3 11.3 111 77-194 200-312 (369)
94 3bgv_A MRNA CAP guanine-N7 met 99.6 1.6E-15 5.5E-20 120.6 10.0 114 78-192 33-158 (313)
95 1nt2_A Fibrillarin-like PRE-rR 99.6 2.4E-15 8.4E-20 113.0 10.4 107 77-189 55-161 (210)
96 3mcz_A O-methyltransferase; ad 99.6 1.3E-15 4.3E-20 123.1 9.2 110 80-193 180-291 (352)
97 3evz_A Methyltransferase; NYSG 99.6 2.4E-15 8.2E-20 114.3 9.7 111 75-189 51-179 (230)
98 1x19_A CRTF-related protein; m 99.6 3.6E-15 1.2E-19 120.8 11.1 110 77-193 188-299 (359)
99 3ckk_A TRNA (guanine-N(7)-)-me 99.6 2.8E-15 9.7E-20 114.5 9.8 112 77-189 44-168 (235)
100 4df3_A Fibrillarin-like rRNA/T 99.6 9.4E-15 3.2E-19 110.7 12.5 109 75-189 73-182 (233)
101 3bkx_A SAM-dependent methyltra 99.6 2.5E-15 8.4E-20 117.2 9.6 113 77-193 41-163 (275)
102 2avn_A Ubiquinone/menaquinone 99.6 3.2E-15 1.1E-19 115.9 10.1 103 78-192 53-155 (260)
103 3htx_A HEN1; HEN1, small RNA m 99.6 1.1E-14 3.7E-19 126.4 13.6 110 77-191 719-836 (950)
104 3njr_A Precorrin-6Y methylase; 99.6 1.2E-14 4.2E-19 108.6 12.4 106 76-194 52-159 (204)
105 1qzz_A RDMB, aclacinomycin-10- 99.6 4E-15 1.4E-19 121.1 10.4 107 77-190 180-288 (374)
106 3dmg_A Probable ribosomal RNA 99.6 6.4E-15 2.2E-19 120.0 11.2 108 78-191 232-342 (381)
107 3g89_A Ribosomal RNA small sub 99.6 8E-15 2.7E-19 112.9 11.2 105 78-189 79-184 (249)
108 3lst_A CALO1 methyltransferase 99.6 7.6E-15 2.6E-19 118.5 11.2 107 77-193 182-290 (348)
109 4dzr_A Protein-(glutamine-N5) 99.6 4.9E-16 1.7E-20 116.6 3.9 114 78-191 29-166 (215)
110 1fbn_A MJ fibrillarin homologu 99.6 1.5E-14 5.2E-19 110.1 12.1 105 77-188 72-177 (230)
111 1vbf_A 231AA long hypothetical 99.6 3.4E-15 1.2E-19 113.6 8.3 102 76-192 67-168 (231)
112 2ip2_A Probable phenazine-spec 99.6 4.6E-15 1.6E-19 119.0 9.5 106 81-193 169-276 (334)
113 3cc8_A Putative methyltransfer 99.6 1.4E-14 4.7E-19 109.7 11.5 102 78-191 31-132 (230)
114 1dus_A MJ0882; hypothetical pr 99.6 7.6E-15 2.6E-19 108.2 9.8 110 77-194 50-162 (194)
115 4dcm_A Ribosomal RNA large sub 99.6 1.2E-14 4.1E-19 118.2 11.5 109 78-191 221-336 (375)
116 3lbf_A Protein-L-isoaspartate 99.6 3.9E-15 1.3E-19 111.6 7.8 103 75-191 73-176 (210)
117 2ozv_A Hypothetical protein AT 99.6 1.4E-14 4.7E-19 112.4 10.9 114 76-189 33-170 (260)
118 2zfu_A Nucleomethylin, cerebra 99.6 2.4E-14 8.2E-19 107.7 11.9 92 75-192 63-154 (215)
119 3reo_A (ISO)eugenol O-methyltr 99.6 1.2E-14 4.1E-19 118.2 11.0 104 77-193 201-304 (368)
120 1tw3_A COMT, carminomycin 4-O- 99.6 7.4E-15 2.5E-19 119.0 9.7 108 77-191 181-290 (360)
121 3p9c_A Caffeic acid O-methyltr 99.6 1.9E-14 6.6E-19 116.8 12.1 105 77-194 199-303 (364)
122 4a6d_A Hydroxyindole O-methylt 99.6 2.7E-14 9.2E-19 115.4 12.6 110 77-193 177-287 (353)
123 2ift_A Putative methylase HI07 99.6 6.5E-15 2.2E-19 109.9 8.0 109 79-193 53-167 (201)
124 2yxe_A Protein-L-isoaspartate 99.6 5.8E-15 2E-19 111.1 7.5 105 75-192 73-180 (215)
125 3ntv_A MW1564 protein; rossman 99.6 9.9E-15 3.4E-19 111.3 8.7 106 76-189 68-176 (232)
126 1g8a_A Fibrillarin-like PRE-rR 99.6 3.4E-14 1.2E-18 107.8 11.2 106 77-188 71-177 (227)
127 3uwp_A Histone-lysine N-methyl 99.5 1.2E-14 4.1E-19 117.8 8.8 115 75-194 169-293 (438)
128 3tfw_A Putative O-methyltransf 99.5 2.4E-14 8.1E-19 110.3 9.8 109 75-190 59-171 (248)
129 3mq2_A 16S rRNA methyltransfer 99.5 8.7E-15 3E-19 110.4 7.0 106 77-189 25-140 (218)
130 3lpm_A Putative methyltransfer 99.5 2.8E-14 9.5E-19 110.5 9.9 112 75-189 44-176 (259)
131 2pjd_A Ribosomal RNA small sub 99.5 4.4E-15 1.5E-19 119.6 5.6 108 78-191 195-305 (343)
132 3giw_A Protein of unknown func 99.5 2.3E-14 7.9E-19 110.7 9.3 116 78-193 77-204 (277)
133 3adn_A Spermidine synthase; am 99.5 2E-14 6.7E-19 113.2 9.1 109 78-189 82-198 (294)
134 3q7e_A Protein arginine N-meth 99.5 2.1E-14 7.2E-19 115.9 9.3 105 77-187 64-171 (349)
135 2esr_A Methyltransferase; stru 99.5 7.9E-15 2.7E-19 107.0 6.2 111 77-194 29-143 (177)
136 3grz_A L11 mtase, ribosomal pr 99.5 2.2E-14 7.6E-19 107.1 8.8 106 77-194 58-164 (205)
137 2vdv_E TRNA (guanine-N(7)-)-me 99.5 3.5E-14 1.2E-18 109.2 9.8 111 78-189 48-173 (246)
138 1fp1_D Isoliquiritigenin 2'-O- 99.5 2.5E-14 8.5E-19 116.5 9.1 102 77-191 207-308 (372)
139 1o9g_A RRNA methyltransferase; 99.5 1.9E-14 6.6E-19 110.8 8.0 113 79-191 51-216 (250)
140 3q87_B N6 adenine specific DNA 99.5 5.8E-14 2E-18 102.0 10.1 99 78-193 22-127 (170)
141 1fp2_A Isoflavone O-methyltran 99.5 3.3E-14 1.1E-18 114.8 9.7 104 77-193 186-292 (352)
142 2fhp_A Methylase, putative; al 99.5 9.8E-15 3.3E-19 107.3 6.1 112 78-193 43-158 (187)
143 3dr5_A Putative O-methyltransf 99.5 2.3E-14 7.7E-19 108.5 8.1 102 81-189 58-163 (221)
144 1ws6_A Methyltransferase; stru 99.5 5.2E-15 1.8E-19 107.1 4.3 111 79-195 41-153 (171)
145 3kr9_A SAM-dependent methyltra 99.5 3.5E-14 1.2E-18 107.0 8.9 112 70-190 6-120 (225)
146 3m33_A Uncharacterized protein 99.5 1.9E-14 6.7E-19 109.2 7.6 94 77-187 46-140 (226)
147 3u81_A Catechol O-methyltransf 99.5 1.4E-14 4.9E-19 109.5 6.8 114 75-191 54-172 (221)
148 2frn_A Hypothetical protein PH 99.5 3.6E-14 1.2E-18 111.0 9.1 105 76-192 122-228 (278)
149 3gdh_A Trimethylguanosine synt 99.5 1.2E-15 4.1E-20 116.9 0.7 104 75-187 74-179 (241)
150 3p2e_A 16S rRNA methylase; met 99.5 2.1E-14 7E-19 109.0 7.4 109 77-188 22-138 (225)
151 2ipx_A RRNA 2'-O-methyltransfe 99.5 3.2E-14 1.1E-18 108.4 8.6 107 77-189 75-182 (233)
152 3lec_A NADB-rossmann superfami 99.5 4E-14 1.4E-18 106.9 8.9 116 68-191 10-127 (230)
153 3id6_C Fibrillarin-like rRNA/T 99.5 8E-14 2.7E-18 105.8 10.4 107 77-189 74-181 (232)
154 2fpo_A Methylase YHHF; structu 99.5 3.5E-14 1.2E-18 106.0 8.2 106 79-191 54-162 (202)
155 1ej0_A FTSJ; methyltransferase 99.5 2.5E-14 8.6E-19 103.8 7.3 110 75-194 18-141 (180)
156 2fyt_A Protein arginine N-meth 99.5 6.2E-14 2.1E-18 112.7 10.2 105 76-186 61-168 (340)
157 1jg1_A PIMT;, protein-L-isoasp 99.5 2.4E-14 8.4E-19 109.2 7.4 103 76-192 88-192 (235)
158 3duw_A OMT, O-methyltransferas 99.5 3.7E-14 1.3E-18 107.3 8.2 111 75-190 54-168 (223)
159 2yxd_A Probable cobalt-precorr 99.5 5.1E-14 1.7E-18 102.8 8.6 104 76-194 32-136 (183)
160 1p91_A Ribosomal RNA large sub 99.5 1.2E-13 4E-18 107.4 11.1 100 78-194 84-183 (269)
161 3r0q_C Probable protein argini 99.5 3.2E-14 1.1E-18 115.9 8.2 107 76-189 60-169 (376)
162 1dl5_A Protein-L-isoaspartate 99.5 3.6E-14 1.2E-18 113.1 8.4 105 75-191 71-177 (317)
163 2plw_A Ribosomal RNA methyltra 99.5 5.3E-14 1.8E-18 104.6 8.8 108 77-194 20-159 (201)
164 2bm8_A Cephalosporin hydroxyla 99.5 3.8E-14 1.3E-18 108.3 8.1 102 79-189 81-187 (236)
165 3tr6_A O-methyltransferase; ce 99.5 5.1E-14 1.8E-18 106.6 8.7 112 75-191 60-176 (225)
166 3lcv_B Sisomicin-gentamicin re 99.5 3.1E-14 1.1E-18 108.3 7.4 109 75-189 128-236 (281)
167 1yb2_A Hypothetical protein TA 99.5 4.9E-14 1.7E-18 110.1 8.6 105 76-192 107-214 (275)
168 3gnl_A Uncharacterized protein 99.5 5.9E-14 2E-18 106.8 8.8 116 68-191 10-127 (244)
169 3a27_A TYW2, uncharacterized p 99.5 7.9E-14 2.7E-18 108.8 9.7 107 75-192 115-222 (272)
170 3c3p_A Methyltransferase; NP_9 99.5 3.9E-14 1.3E-18 106.2 7.5 104 77-189 54-160 (210)
171 2y1w_A Histone-arginine methyl 99.5 6.7E-14 2.3E-18 112.9 9.3 105 77-188 48-154 (348)
172 4e2x_A TCAB9; kijanose, tetron 99.5 1.2E-14 4.1E-19 120.0 5.0 105 77-190 105-209 (416)
173 2nxc_A L11 mtase, ribosomal pr 99.5 2.7E-14 9.4E-19 110.3 6.6 106 77-194 118-223 (254)
174 3mb5_A SAM-dependent methyltra 99.5 5.4E-14 1.8E-18 108.5 8.0 105 75-191 89-196 (255)
175 2gpy_A O-methyltransferase; st 99.5 4.6E-14 1.6E-18 107.5 7.5 108 76-189 51-160 (233)
176 3gjy_A Spermidine synthase; AP 99.5 8.6E-14 3E-18 109.9 9.3 109 81-191 91-202 (317)
177 1l3i_A Precorrin-6Y methyltran 99.5 9.9E-14 3.4E-18 102.0 8.8 107 76-194 30-139 (192)
178 1u2z_A Histone-lysine N-methyl 99.5 4.1E-14 1.4E-18 116.3 7.4 111 76-189 239-359 (433)
179 4azs_A Methyltransferase WBDD; 99.5 1.3E-14 4.6E-19 124.1 4.4 110 76-189 63-173 (569)
180 3sso_A Methyltransferase; macr 99.5 8.6E-14 3E-18 112.5 8.8 115 66-191 202-326 (419)
181 1xj5_A Spermidine synthase 1; 99.5 7.9E-14 2.7E-18 111.6 8.2 109 78-188 119-234 (334)
182 3bwc_A Spermidine synthase; SA 99.5 1.2E-13 4.2E-18 109.3 8.8 111 78-190 94-211 (304)
183 1g6q_1 HnRNP arginine N-methyl 99.5 1.5E-13 5E-18 110.0 9.3 104 78-187 37-143 (328)
184 2pwy_A TRNA (adenine-N(1)-)-me 99.5 1E-13 3.5E-18 107.0 8.1 107 75-192 92-201 (258)
185 1i1n_A Protein-L-isoaspartate 99.5 1.6E-13 5.6E-18 103.9 9.0 104 76-191 74-184 (226)
186 2pbf_A Protein-L-isoaspartate 99.5 1.2E-13 4.1E-18 104.7 8.2 108 76-191 77-195 (227)
187 3r3h_A O-methyltransferase, SA 99.5 1.1E-14 3.6E-19 111.8 2.2 108 75-189 56-170 (242)
188 2i7c_A Spermidine synthase; tr 99.5 1.2E-13 4E-18 108.4 8.0 109 78-189 77-192 (283)
189 3tma_A Methyltransferase; thum 99.5 2.3E-13 7.9E-18 110.0 9.5 113 75-191 199-319 (354)
190 1sui_A Caffeoyl-COA O-methyltr 99.5 8.2E-14 2.8E-18 107.2 6.5 108 75-189 75-190 (247)
191 2b2c_A Spermidine synthase; be 99.5 1.1E-13 3.7E-18 109.9 7.1 108 78-189 107-222 (314)
192 1iy9_A Spermidine synthase; ro 99.4 2E-13 6.8E-18 106.6 8.4 110 78-190 74-190 (275)
193 1zg3_A Isoflavanone 4'-O-methy 99.4 2.7E-13 9.1E-18 109.8 9.4 102 78-192 192-296 (358)
194 2o07_A Spermidine synthase; st 99.4 1.3E-13 4.6E-18 109.0 7.3 109 78-189 94-209 (304)
195 3dou_A Ribosomal RNA large sub 99.4 1E-13 3.4E-18 102.6 6.0 108 77-196 23-146 (191)
196 3cbg_A O-methyltransferase; cy 99.4 1.5E-13 5.1E-18 104.7 6.9 109 76-189 69-182 (232)
197 2pt6_A Spermidine synthase; tr 99.4 1.9E-13 6.6E-18 108.9 7.8 108 78-189 115-230 (321)
198 1i9g_A Hypothetical protein RV 99.4 2.1E-13 7.2E-18 106.6 7.9 106 75-191 95-205 (280)
199 1uir_A Polyamine aminopropyltr 99.4 1.9E-13 6.4E-18 108.7 7.5 109 78-189 76-195 (314)
200 4hc4_A Protein arginine N-meth 99.4 3E-13 1E-17 109.4 8.7 104 77-187 81-187 (376)
201 1o54_A SAM-dependent O-methylt 99.4 2.3E-13 7.7E-18 106.4 7.7 104 76-191 109-215 (277)
202 1ixk_A Methyltransferase; open 99.4 5.2E-13 1.8E-17 106.2 9.8 112 75-190 114-247 (315)
203 1r18_A Protein-L-isoaspartate( 99.4 2.3E-13 8E-18 103.2 7.4 103 76-191 81-196 (227)
204 1mjf_A Spermidine synthase; sp 99.4 1.9E-13 6.5E-18 107.1 7.0 107 78-189 74-193 (281)
205 3bzb_A Uncharacterized protein 99.4 6.2E-13 2.1E-17 104.1 10.0 108 78-188 78-204 (281)
206 2hnk_A SAM-dependent O-methylt 99.4 5.8E-13 2E-17 101.8 9.3 109 76-189 57-181 (239)
207 3c3y_A Pfomt, O-methyltransfer 99.4 2.9E-13 1E-17 103.4 7.3 110 75-189 66-181 (237)
208 3ajd_A Putative methyltransfer 99.4 4E-13 1.4E-17 104.9 8.2 117 75-191 79-213 (274)
209 3b3j_A Histone-arginine methyl 99.4 2.3E-13 8E-18 113.9 7.2 104 77-187 156-261 (480)
210 2b25_A Hypothetical protein; s 99.4 3.8E-13 1.3E-17 108.0 7.9 108 76-192 102-222 (336)
211 3frh_A 16S rRNA methylase; met 99.4 5.1E-13 1.8E-17 100.7 8.0 103 78-189 104-206 (253)
212 1inl_A Spermidine synthase; be 99.4 4.6E-13 1.6E-17 105.6 7.8 109 78-189 89-205 (296)
213 2avd_A Catechol-O-methyltransf 99.4 3.4E-13 1.2E-17 102.3 6.8 108 75-189 65-179 (229)
214 1nv8_A HEMK protein; class I a 99.4 8.5E-13 2.9E-17 103.5 8.6 104 79-189 123-249 (284)
215 2igt_A SAM dependent methyltra 99.4 3.8E-13 1.3E-17 107.7 6.0 110 78-189 152-272 (332)
216 2yxl_A PH0851 protein, 450AA l 99.4 3.6E-12 1.2E-16 106.1 12.0 117 75-193 255-393 (450)
217 2yvl_A TRMI protein, hypotheti 99.4 2.1E-12 7.2E-17 99.0 9.9 103 76-191 88-192 (248)
218 2nyu_A Putative ribosomal RNA 99.4 2E-12 6.9E-17 95.6 9.0 108 77-194 20-150 (196)
219 3hp7_A Hemolysin, putative; st 99.4 1.2E-12 4.1E-17 102.3 8.1 100 78-188 84-184 (291)
220 1ne2_A Hypothetical protein TA 99.4 3.5E-12 1.2E-16 94.7 10.1 97 77-187 49-145 (200)
221 3k6r_A Putative transferase PH 99.4 2.4E-12 8.3E-17 100.1 8.8 107 73-191 119-227 (278)
222 1sqg_A SUN protein, FMU protei 99.4 4E-12 1.4E-16 105.2 10.5 115 75-191 242-376 (429)
223 2h00_A Methyltransferase 10 do 99.3 4.3E-13 1.5E-17 103.4 4.3 82 79-161 65-151 (254)
224 4dmg_A Putative uncharacterize 99.3 4.2E-12 1.4E-16 103.7 9.6 111 78-193 213-330 (393)
225 1wy7_A Hypothetical protein PH 99.3 1.3E-11 4.6E-16 92.0 11.6 101 77-187 47-147 (207)
226 2f8l_A Hypothetical protein LM 99.3 1.9E-12 6.6E-17 104.2 7.4 108 77-189 128-256 (344)
227 2qm3_A Predicted methyltransfe 99.3 4.6E-12 1.6E-16 103.1 9.1 105 78-189 171-278 (373)
228 2b78_A Hypothetical protein SM 99.3 1.4E-12 4.9E-17 106.4 6.1 114 78-192 211-334 (385)
229 2cmg_A Spermidine synthase; tr 99.3 4.2E-12 1.4E-16 98.3 7.9 96 78-189 71-171 (262)
230 2wa2_A Non-structural protein 99.3 2.1E-12 7.3E-17 100.7 6.2 107 77-194 80-198 (276)
231 1wxx_A TT1595, hypothetical pr 99.3 3.5E-12 1.2E-16 104.1 7.5 116 73-191 204-327 (382)
232 3c0k_A UPF0064 protein YCCW; P 99.3 4.7E-12 1.6E-16 103.8 8.3 115 77-192 218-342 (396)
233 3opn_A Putative hemolysin; str 99.3 8.7E-12 3E-16 94.9 8.7 99 77-189 35-137 (232)
234 2as0_A Hypothetical protein PH 99.3 4.9E-12 1.7E-16 103.7 7.8 112 79-191 217-337 (396)
235 2oxt_A Nucleoside-2'-O-methylt 99.3 2.8E-12 9.7E-17 99.4 5.7 106 77-193 72-189 (265)
236 3m6w_A RRNA methylase; rRNA me 99.3 5E-12 1.7E-16 104.9 7.4 112 75-189 97-229 (464)
237 3tm4_A TRNA (guanine N2-)-meth 99.3 1.2E-11 4E-16 100.7 9.1 107 77-189 215-329 (373)
238 3v97_A Ribosomal RNA large sub 99.3 5.1E-12 1.8E-16 110.3 7.3 116 72-191 532-659 (703)
239 2frx_A Hypothetical protein YE 99.3 1.8E-11 6.2E-16 102.4 10.3 109 79-190 117-247 (479)
240 2ld4_A Anamorsin; methyltransf 99.3 2E-12 6.7E-17 94.2 3.8 92 77-189 10-101 (176)
241 2yx1_A Hypothetical protein MJ 99.3 9.1E-12 3.1E-16 99.9 7.6 101 77-193 193-295 (336)
242 3m4x_A NOL1/NOP2/SUN family pr 99.2 7.3E-12 2.5E-16 103.8 5.3 112 75-189 101-234 (456)
243 2p41_A Type II methyltransfera 99.2 1.4E-11 4.7E-16 97.5 6.2 105 77-192 80-194 (305)
244 2jjq_A Uncharacterized RNA met 99.2 1.1E-10 3.7E-15 96.4 10.9 100 77-189 288-387 (425)
245 2dul_A N(2),N(2)-dimethylguano 99.2 2E-11 6.8E-16 99.2 6.5 102 79-189 47-164 (378)
246 1zq9_A Probable dimethyladenos 99.2 1.6E-11 5.5E-16 96.3 5.7 76 76-159 25-102 (285)
247 1uwv_A 23S rRNA (uracil-5-)-me 99.2 1.8E-10 6.2E-15 95.4 11.8 105 77-189 284-389 (433)
248 2okc_A Type I restriction enzy 99.1 5.8E-11 2E-15 98.8 6.7 108 77-189 169-307 (445)
249 2ih2_A Modification methylase 99.1 1E-10 3.5E-15 96.5 6.5 99 78-189 38-164 (421)
250 2xyq_A Putative 2'-O-methyl tr 99.1 3.6E-10 1.2E-14 88.4 8.9 99 77-194 61-176 (290)
251 3k0b_A Predicted N6-adenine-sp 99.1 5.7E-10 1.9E-14 91.1 9.9 114 75-193 197-354 (393)
252 3ldg_A Putative uncharacterize 99.1 1.1E-09 3.9E-14 89.0 11.4 119 75-198 190-352 (384)
253 2h1r_A Dimethyladenosine trans 99.1 2.9E-10 1E-14 89.7 7.6 77 76-160 39-116 (299)
254 2qfm_A Spermine synthase; sper 99.1 1.5E-10 5.2E-15 92.6 6.0 108 79-189 188-314 (364)
255 1yub_A Ermam, rRNA methyltrans 99.0 3.6E-11 1.2E-15 92.2 1.3 104 77-189 27-145 (245)
256 3axs_A Probable N(2),N(2)-dime 99.0 2.3E-10 8E-15 93.1 6.1 103 78-189 51-158 (392)
257 3evf_A RNA-directed RNA polyme 99.0 3.2E-10 1.1E-14 86.8 6.2 110 75-191 70-186 (277)
258 3bt7_A TRNA (uracil-5-)-methyl 99.0 4.3E-10 1.5E-14 91.3 7.1 100 80-191 214-328 (369)
259 3gru_A Dimethyladenosine trans 99.0 2.1E-09 7.3E-14 84.3 10.6 76 76-158 47-122 (295)
260 3ldu_A Putative methylase; str 99.0 1.1E-09 3.8E-14 89.2 9.3 115 76-195 192-350 (385)
261 2b9e_A NOL1/NOP2/SUN domain fa 99.0 3.9E-09 1.3E-13 83.5 10.9 112 75-189 98-234 (309)
262 3tqs_A Ribosomal RNA small sub 99.0 5.6E-09 1.9E-13 80.4 10.9 77 76-156 26-102 (255)
263 1m6y_A S-adenosyl-methyltransf 98.9 3.6E-09 1.2E-13 83.3 8.4 81 77-157 24-105 (301)
264 1qam_A ERMC' methyltransferase 98.9 3.8E-08 1.3E-12 75.3 13.3 60 77-139 28-87 (244)
265 2ar0_A M.ecoki, type I restric 98.9 2.6E-09 9E-14 90.7 7.1 111 76-189 166-312 (541)
266 3o4f_A Spermidine synthase; am 98.9 1.5E-08 5.1E-13 79.0 10.5 110 77-189 81-198 (294)
267 3gcz_A Polyprotein; flavivirus 98.8 1.8E-09 6.2E-14 82.8 4.0 110 76-191 87-203 (282)
268 3b5i_A S-adenosyl-L-methionine 98.8 3.1E-08 1.1E-12 80.0 10.0 112 79-194 52-230 (374)
269 3ftd_A Dimethyladenosine trans 98.8 1.4E-07 4.7E-12 72.4 13.1 63 76-142 28-90 (249)
270 3fut_A Dimethyladenosine trans 98.8 3.3E-08 1.1E-12 76.7 9.6 76 76-159 44-119 (271)
271 3khk_A Type I restriction-modi 98.8 1.3E-08 4.5E-13 86.3 7.8 107 80-189 245-395 (544)
272 3lkd_A Type I restriction-modi 98.8 9.7E-08 3.3E-12 80.9 12.6 111 78-189 220-358 (542)
273 3v97_A Ribosomal RNA large sub 98.7 3.7E-08 1.3E-12 86.1 9.8 113 76-190 187-348 (703)
274 2r6z_A UPF0341 protein in RSP 98.7 3.6E-09 1.2E-13 81.6 3.0 81 77-161 81-172 (258)
275 4fzv_A Putative methyltransfer 98.7 1.4E-08 4.9E-13 81.6 6.4 117 70-189 139-284 (359)
276 4gqb_A Protein arginine N-meth 98.7 1.6E-08 5.6E-13 86.6 6.8 102 79-186 357-464 (637)
277 1m6e_X S-adenosyl-L-methionnin 98.7 7.8E-08 2.7E-12 77.2 10.3 114 78-195 50-215 (359)
278 3uzu_A Ribosomal RNA small sub 98.7 5.8E-08 2E-12 75.6 8.8 64 76-142 39-104 (279)
279 3ua3_A Protein arginine N-meth 98.7 1.4E-08 4.6E-13 87.3 5.6 107 80-186 410-531 (745)
280 3cvo_A Methyltransferase-like 98.7 1.5E-07 5E-12 69.5 10.2 102 78-189 29-154 (202)
281 2k4m_A TR8_protein, UPF0146 pr 98.7 5.8E-08 2E-12 67.2 7.0 115 78-218 34-151 (153)
282 3s1s_A Restriction endonucleas 98.7 1E-07 3.4E-12 83.2 9.7 108 79-189 321-465 (878)
283 2efj_A 3,7-dimethylxanthine me 98.6 4.2E-07 1.5E-11 73.5 12.3 114 80-195 53-231 (384)
284 3eld_A Methyltransferase; flav 98.6 5.2E-08 1.8E-12 75.2 6.3 115 75-195 77-199 (300)
285 3ll7_A Putative methyltransfer 98.6 1.2E-08 4.3E-13 83.2 2.6 75 79-157 93-170 (410)
286 1qyr_A KSGA, high level kasuga 98.6 1.1E-07 3.8E-12 72.9 7.2 63 76-141 18-80 (252)
287 2oyr_A UPF0341 protein YHIQ; a 98.5 7.5E-08 2.6E-12 74.0 4.4 80 78-162 85-176 (258)
288 2qy6_A UPF0209 protein YFCK; s 98.4 3.3E-07 1.1E-11 70.5 6.1 109 77-187 58-211 (257)
289 2wk1_A NOVP; transferase, O-me 98.4 5.2E-07 1.8E-11 70.1 7.0 110 76-191 103-246 (282)
290 3c6k_A Spermine synthase; sper 98.3 9E-07 3.1E-11 71.2 6.4 110 78-188 204-330 (381)
291 3ufb_A Type I restriction-modi 98.3 2.4E-06 8.1E-11 72.4 9.3 115 75-189 213-362 (530)
292 1wg8_A Predicted S-adenosylmet 98.3 3.3E-06 1.1E-10 65.2 8.8 85 66-156 10-95 (285)
293 3p8z_A Mtase, non-structural p 98.2 1.3E-05 4.4E-10 59.9 9.6 111 76-194 75-191 (267)
294 4auk_A Ribosomal RNA large sub 98.2 1.8E-05 6E-10 63.5 10.8 95 77-189 209-306 (375)
295 2px2_A Genome polyprotein [con 98.0 2.1E-05 7.1E-10 59.6 8.4 107 76-192 70-186 (269)
296 1rjd_A PPM1P, carboxy methyl t 98.0 6.2E-05 2.1E-09 60.0 10.9 112 78-191 96-234 (334)
297 3lkz_A Non-structural protein 97.9 5.3E-05 1.8E-09 58.4 9.0 109 76-192 91-207 (321)
298 3tka_A Ribosomal RNA small sub 97.7 0.00013 4.5E-09 57.6 7.9 87 65-156 44-134 (347)
299 2zig_A TTHA0409, putative modi 97.7 3.8E-05 1.3E-09 60.2 4.9 47 77-125 233-279 (297)
300 2uyo_A Hypothetical protein ML 97.6 0.00016 5.3E-09 57.1 7.4 112 79-193 102-222 (310)
301 2vz8_A Fatty acid synthase; tr 97.5 3.7E-05 1.3E-09 75.6 3.4 105 78-189 1239-1348(2512)
302 1i4w_A Mitochondrial replicati 97.5 0.00028 9.5E-09 56.5 7.6 60 79-140 58-117 (353)
303 2oo3_A Protein involved in cat 97.4 0.00025 8.5E-09 54.7 5.5 114 69-188 82-197 (283)
304 3r24_A NSP16, 2'-O-methyl tran 97.2 0.00061 2.1E-08 52.6 5.6 101 77-195 107-223 (344)
305 1g60_A Adenine-specific methyl 97.1 0.00055 1.9E-08 52.5 4.4 46 77-124 210-255 (260)
306 3g7u_A Cytosine-specific methy 96.8 0.0079 2.7E-07 48.6 9.3 79 81-164 3-85 (376)
307 3tos_A CALS11; methyltransfera 96.7 0.0063 2.1E-07 46.4 7.6 110 78-191 68-219 (257)
308 1g55_A DNA cytosine methyltran 96.5 0.0031 1.1E-07 50.4 5.4 79 80-163 2-81 (343)
309 3iei_A Leucine carboxyl methyl 96.4 0.033 1.1E-06 44.2 10.6 110 79-190 90-230 (334)
310 2c7p_A Modification methylase 96.3 0.0074 2.5E-07 47.8 6.3 74 80-163 11-84 (327)
311 3vyw_A MNMC2; tRNA wobble urid 96.3 0.014 4.8E-07 45.6 7.7 108 78-187 95-224 (308)
312 1boo_A Protein (N-4 cytosine-s 96.1 0.0037 1.3E-07 49.5 3.3 50 76-127 249-298 (323)
313 2qrv_A DNA (cytosine-5)-methyl 95.8 0.013 4.3E-07 45.8 5.3 78 76-158 12-91 (295)
314 2py6_A Methyltransferase FKBM; 95.8 0.01 3.5E-07 48.5 4.9 49 77-125 224-274 (409)
315 3qv2_A 5-cytosine DNA methyltr 95.8 0.013 4.4E-07 46.5 5.3 80 78-163 8-89 (327)
316 3fwz_A Inner membrane protein 95.5 0.05 1.7E-06 37.2 6.9 99 81-192 8-108 (140)
317 1f8f_A Benzyl alcohol dehydrog 95.4 0.023 7.7E-07 45.7 5.6 100 76-190 187-290 (371)
318 3ubt_Y Modification methylase 95.3 0.092 3.1E-06 41.3 8.8 74 81-163 1-74 (331)
319 4dvj_A Putative zinc-dependent 95.2 0.1 3.5E-06 41.7 8.8 95 79-188 171-269 (363)
320 2dph_A Formaldehyde dismutase; 95.1 0.055 1.9E-06 43.9 6.9 107 75-190 181-300 (398)
321 1eg2_A Modification methylase 95.0 0.044 1.5E-06 43.2 6.0 47 76-124 239-288 (319)
322 4h0n_A DNMT2; SAH binding, tra 95.0 0.02 7E-07 45.4 4.0 79 80-163 3-82 (333)
323 1pl8_A Human sorbitol dehydrog 94.7 0.071 2.4E-06 42.5 6.6 98 76-190 168-274 (356)
324 3jv7_A ADH-A; dehydrogenase, n 94.7 0.044 1.5E-06 43.5 5.3 102 76-191 168-272 (345)
325 4ej6_A Putative zinc-binding d 94.6 0.091 3.1E-06 42.2 6.9 101 75-190 178-285 (370)
326 1zkd_A DUF185; NESG, RPR58, st 94.5 0.13 4.3E-06 41.7 7.5 46 78-123 79-131 (387)
327 3s2e_A Zinc-containing alcohol 94.4 0.089 3E-06 41.6 6.5 100 76-191 163-265 (340)
328 2zwa_A Leucine carboxyl methyl 94.4 0.14 4.7E-06 44.8 8.2 108 79-189 107-254 (695)
329 3llv_A Exopolyphosphatase-rela 94.4 0.42 1.4E-05 32.3 9.1 98 80-191 6-105 (141)
330 3l9w_A Glutathione-regulated p 94.3 0.18 6.1E-06 41.2 8.2 103 80-195 4-108 (413)
331 1kol_A Formaldehyde dehydrogen 94.1 0.039 1.3E-06 44.7 3.8 107 75-189 181-300 (398)
332 3pvc_A TRNA 5-methylaminomethy 94.1 0.096 3.3E-06 45.7 6.5 108 78-187 57-209 (689)
333 3fpc_A NADP-dependent alcohol 94.0 0.038 1.3E-06 44.0 3.5 101 75-191 162-268 (352)
334 3ps9_A TRNA 5-methylaminomethy 94.0 0.11 3.6E-06 45.3 6.6 108 78-187 65-217 (676)
335 3me5_A Cytosine-specific methy 93.8 0.38 1.3E-05 40.1 9.2 84 79-164 87-183 (482)
336 3two_A Mannitol dehydrogenase; 93.8 0.1 3.4E-06 41.5 5.6 94 76-191 173-267 (348)
337 3m6i_A L-arabinitol 4-dehydrog 93.7 0.18 6.1E-06 40.2 6.9 104 75-191 175-285 (363)
338 1e3j_A NADP(H)-dependent ketos 93.6 0.22 7.4E-06 39.6 7.3 99 76-190 165-272 (352)
339 3pxx_A Carveol dehydrogenase; 93.3 0.26 8.8E-06 37.7 7.1 109 79-189 9-153 (287)
340 3oig_A Enoyl-[acyl-carrier-pro 93.3 0.38 1.3E-05 36.3 7.9 109 79-189 6-147 (266)
341 1uuf_A YAHK, zinc-type alcohol 93.2 0.19 6.6E-06 40.3 6.4 98 76-190 191-289 (369)
342 2jhf_A Alcohol dehydrogenase E 93.1 0.31 1E-05 39.0 7.5 99 76-190 188-294 (374)
343 1p0f_A NADP-dependent alcohol 93.0 0.27 9.2E-06 39.3 7.1 100 76-190 188-294 (373)
344 1cdo_A Alcohol dehydrogenase; 93.0 0.25 8.7E-06 39.5 6.8 99 76-190 189-295 (374)
345 3uko_A Alcohol dehydrogenase c 92.9 0.18 6.2E-06 40.5 5.9 100 76-190 190-296 (378)
346 2h6e_A ADH-4, D-arabinose 1-de 92.8 0.075 2.6E-06 42.1 3.4 99 76-190 168-270 (344)
347 3ip1_A Alcohol dehydrogenase, 92.6 0.7 2.4E-05 37.4 9.0 102 76-191 210-320 (404)
348 1e3i_A Alcohol dehydrogenase, 92.4 0.33 1.1E-05 38.9 6.8 99 76-190 192-298 (376)
349 2zig_A TTHA0409, putative modi 92.4 0.08 2.7E-06 41.2 3.0 60 128-189 20-97 (297)
350 2fzw_A Alcohol dehydrogenase c 92.2 0.31 1.1E-05 38.9 6.4 99 76-190 187-293 (373)
351 2b5w_A Glucose dehydrogenase; 92.1 0.32 1.1E-05 38.7 6.3 92 81-190 174-274 (357)
352 1pqw_A Polyketide synthase; ro 92.1 0.43 1.5E-05 34.3 6.5 98 76-190 35-138 (198)
353 4fn4_A Short chain dehydrogena 92.1 0.21 7.3E-06 37.9 5.0 79 79-159 6-93 (254)
354 1v3u_A Leukotriene B4 12- hydr 92.0 0.33 1.1E-05 38.1 6.2 97 76-189 142-244 (333)
355 1jvb_A NAD(H)-dependent alcoho 92.0 0.14 4.9E-06 40.5 4.1 100 76-190 167-272 (347)
356 1rjw_A ADH-HT, alcohol dehydro 92.0 0.42 1.4E-05 37.7 6.8 99 76-191 161-263 (339)
357 1vj0_A Alcohol dehydrogenase, 91.9 0.25 8.5E-06 39.7 5.5 100 77-191 193-300 (380)
358 4a2c_A Galactitol-1-phosphate 91.7 0.65 2.2E-05 36.5 7.7 102 75-191 156-262 (346)
359 4b7c_A Probable oxidoreductase 91.6 0.29 1E-05 38.5 5.5 99 75-190 145-249 (336)
360 3fbg_A Putative arginate lyase 91.6 0.4 1.4E-05 37.9 6.4 94 79-188 150-247 (346)
361 3edm_A Short chain dehydrogena 91.4 0.33 1.1E-05 36.7 5.4 109 79-189 7-143 (259)
362 3tjr_A Short chain dehydrogena 91.2 0.42 1.4E-05 37.0 5.9 80 79-160 30-118 (301)
363 3uog_A Alcohol dehydrogenase; 91.0 0.55 1.9E-05 37.4 6.6 102 75-191 185-289 (363)
364 3c85_A Putative glutathione-re 91.0 1.9 6.3E-05 30.4 8.9 99 80-191 39-141 (183)
365 3l4b_C TRKA K+ channel protien 91.0 0.7 2.4E-05 33.8 6.8 97 82-190 2-100 (218)
366 3ggo_A Prephenate dehydrogenas 90.9 3.3 0.00011 32.3 10.9 92 80-187 33-126 (314)
367 4eez_A Alcohol dehydrogenase 1 90.9 0.62 2.1E-05 36.7 6.8 105 75-190 159-264 (348)
368 4fgs_A Probable dehydrogenase 90.7 0.61 2.1E-05 35.8 6.3 106 79-189 28-159 (273)
369 3t7c_A Carveol dehydrogenase; 90.7 0.79 2.7E-05 35.4 7.1 79 79-159 27-126 (299)
370 3grk_A Enoyl-(acyl-carrier-pro 90.3 0.96 3.3E-05 34.8 7.2 108 79-189 30-169 (293)
371 3ijr_A Oxidoreductase, short c 90.2 0.76 2.6E-05 35.3 6.6 109 79-189 46-182 (291)
372 2c0c_A Zinc binding alcohol de 90.1 0.87 3E-05 36.2 7.0 98 76-190 160-262 (362)
373 3tox_A Short chain dehydrogena 90.1 0.44 1.5E-05 36.5 5.1 79 79-159 7-94 (280)
374 3gms_A Putative NADPH:quinone 90.0 0.5 1.7E-05 37.2 5.5 99 75-190 140-244 (340)
375 3is3_A 17BETA-hydroxysteroid d 90.0 0.84 2.9E-05 34.6 6.6 109 79-189 17-152 (270)
376 4g81_D Putative hexonate dehyd 90.0 0.23 7.8E-06 37.8 3.3 79 79-159 8-95 (255)
377 3r3s_A Oxidoreductase; structu 89.9 0.62 2.1E-05 35.9 5.9 109 79-189 48-185 (294)
378 3rkr_A Short chain oxidoreduct 89.8 0.55 1.9E-05 35.4 5.4 79 79-160 28-116 (262)
379 3uve_A Carveol dehydrogenase ( 89.8 0.79 2.7E-05 35.0 6.4 79 79-159 10-113 (286)
380 3nx4_A Putative oxidoreductase 89.6 1.1 3.6E-05 35.0 7.0 92 82-190 149-242 (324)
381 2dq4_A L-threonine 3-dehydroge 89.5 0.36 1.2E-05 38.1 4.3 95 79-190 164-263 (343)
382 1boo_A Protein (N-4 cytosine-s 89.4 0.35 1.2E-05 38.1 4.1 60 128-189 13-84 (323)
383 3ek2_A Enoyl-(acyl-carrier-pro 89.3 0.67 2.3E-05 34.9 5.6 110 77-189 11-153 (271)
384 1wma_A Carbonyl reductase [NAD 89.3 0.71 2.4E-05 34.7 5.7 110 79-189 3-138 (276)
385 4eso_A Putative oxidoreductase 89.3 0.64 2.2E-05 35.0 5.4 106 79-189 7-138 (255)
386 1id1_A Putative potassium chan 89.3 2.3 7.8E-05 29.0 7.9 103 81-193 4-109 (153)
387 3qwb_A Probable quinone oxidor 89.2 1 3.5E-05 35.3 6.7 98 76-190 145-248 (334)
388 3goh_A Alcohol dehydrogenase, 89.1 0.37 1.3E-05 37.5 4.0 91 75-189 138-229 (315)
389 3sx2_A Putative 3-ketoacyl-(ac 89.0 0.89 3E-05 34.5 6.1 81 79-161 12-113 (278)
390 3pgx_A Carveol dehydrogenase; 88.6 1.1 3.7E-05 34.1 6.4 80 79-160 14-115 (280)
391 2j3h_A NADP-dependent oxidored 88.6 0.9 3.1E-05 35.8 6.0 98 76-189 152-255 (345)
392 2aef_A Calcium-gated potassium 88.5 5.1 0.00017 29.4 9.9 97 80-191 9-107 (234)
393 2d8a_A PH0655, probable L-thre 88.4 0.97 3.3E-05 35.7 6.1 96 79-190 167-268 (348)
394 2eih_A Alcohol dehydrogenase; 88.3 0.97 3.3E-05 35.6 6.1 98 76-190 163-266 (343)
395 1yb5_A Quinone oxidoreductase; 88.3 1.7 5.8E-05 34.4 7.5 98 76-190 167-270 (351)
396 2g1u_A Hypothetical protein TM 88.2 2.3 8E-05 29.1 7.4 105 78-193 17-122 (155)
397 1piw_A Hypothetical zinc-type 88.1 0.46 1.6E-05 37.8 4.0 100 76-190 176-277 (360)
398 3jyn_A Quinone oxidoreductase; 88.0 0.93 3.2E-05 35.4 5.7 99 76-191 137-241 (325)
399 3krt_A Crotonyl COA reductase; 87.9 1.3 4.4E-05 36.5 6.8 97 76-189 225-344 (456)
400 4eye_A Probable oxidoreductase 87.8 0.55 1.9E-05 37.1 4.3 99 76-190 156-258 (342)
401 1xa0_A Putative NADPH dependen 87.8 1.4 4.6E-05 34.4 6.5 96 78-190 147-247 (328)
402 3o38_A Short chain dehydrogena 87.8 2.2 7.4E-05 32.0 7.5 80 79-160 21-111 (266)
403 3qiv_A Short-chain dehydrogena 87.7 0.63 2.2E-05 34.8 4.5 79 79-159 8-95 (253)
404 4da9_A Short-chain dehydrogena 87.5 1.7 5.8E-05 33.1 6.8 80 79-160 28-117 (280)
405 1iz0_A Quinone oxidoreductase; 87.3 0.54 1.9E-05 36.3 4.0 93 77-189 123-218 (302)
406 1lnq_A MTHK channels, potassiu 87.3 2.6 8.8E-05 33.0 7.9 97 80-191 115-213 (336)
407 3ksu_A 3-oxoacyl-acyl carrier 87.2 0.85 2.9E-05 34.4 4.9 109 79-189 10-147 (262)
408 4hp8_A 2-deoxy-D-gluconate 3-d 87.2 2.3 7.9E-05 32.0 7.2 75 79-159 8-88 (247)
409 4imr_A 3-oxoacyl-(acyl-carrier 87.1 1.1 3.6E-05 34.2 5.5 79 79-159 32-118 (275)
410 3k31_A Enoyl-(acyl-carrier-pro 87.0 1.8 6.2E-05 33.3 6.7 108 79-189 29-168 (296)
411 2km1_A Protein DRE2; yeast, an 86.7 0.42 1.5E-05 32.4 2.6 44 144-187 53-96 (136)
412 4egf_A L-xylulose reductase; s 86.5 1.5 5.1E-05 33.1 6.0 79 79-159 19-107 (266)
413 2hcy_A Alcohol dehydrogenase 1 86.5 0.63 2.2E-05 36.8 4.0 99 76-190 166-270 (347)
414 1iy8_A Levodione reductase; ox 86.3 1.8 6.2E-05 32.6 6.4 79 79-159 12-101 (267)
415 3v2g_A 3-oxoacyl-[acyl-carrier 86.2 2.8 9.4E-05 31.8 7.3 109 79-189 30-165 (271)
416 3swr_A DNA (cytosine-5)-methyl 86.0 3.2 0.00011 37.8 8.5 83 78-164 538-632 (1002)
417 3trk_A Nonstructural polyprote 86.0 0.54 1.9E-05 35.7 3.0 48 149-196 210-266 (324)
418 1hdc_A 3-alpha, 20 beta-hydrox 85.5 2.8 9.5E-05 31.3 7.0 76 79-159 4-88 (254)
419 3gvc_A Oxidoreductase, probabl 85.4 3 0.0001 31.7 7.2 77 79-160 28-113 (277)
420 4f3n_A Uncharacterized ACR, CO 85.4 0.51 1.8E-05 38.7 2.9 43 80-122 138-185 (432)
421 3u5t_A 3-oxoacyl-[acyl-carrier 85.4 1.5 5.1E-05 33.2 5.5 109 79-189 26-161 (267)
422 1lss_A TRK system potassium up 85.3 6 0.00021 25.9 8.8 98 80-190 4-103 (140)
423 1tt7_A YHFP; alcohol dehydroge 85.2 1.2 4.1E-05 34.8 4.9 97 78-190 148-248 (330)
424 3ged_A Short-chain dehydrogena 85.1 2.9 0.0001 31.4 6.9 72 81-158 3-83 (247)
425 3iht_A S-adenosyl-L-methionine 85.0 0.91 3.1E-05 31.6 3.6 55 79-139 40-94 (174)
426 3gqv_A Enoyl reductase; medium 84.9 2.3 7.9E-05 33.9 6.6 95 78-189 163-263 (371)
427 4dup_A Quinone oxidoreductase; 84.6 1 3.6E-05 35.6 4.4 98 76-190 164-266 (353)
428 1wly_A CAAR, 2-haloacrylate re 84.6 1.7 5.7E-05 34.0 5.6 98 76-190 142-245 (333)
429 1ja9_A 4HNR, 1,3,6,8-tetrahydr 84.6 2 6.7E-05 32.3 5.8 80 79-159 20-108 (274)
430 2zb4_A Prostaglandin reductase 84.1 2.5 8.4E-05 33.4 6.4 97 76-189 155-260 (357)
431 1g0o_A Trihydroxynaphthalene r 83.9 2.4 8.1E-05 32.2 6.1 110 79-189 28-163 (283)
432 4fs3_A Enoyl-[acyl-carrier-pro 83.9 4.5 0.00015 30.3 7.5 78 79-158 5-94 (256)
433 3abi_A Putative uncharacterize 83.8 3.3 0.00011 32.9 7.0 70 77-156 13-83 (365)
434 2cf5_A Atccad5, CAD, cinnamyl 83.7 0.64 2.2E-05 36.9 2.8 96 79-190 180-276 (357)
435 1qor_A Quinone oxidoreductase; 83.5 1.6 5.6E-05 34.0 5.1 98 76-190 137-240 (327)
436 2hmt_A YUAA protein; RCK, KTN, 83.5 6.9 0.00024 25.7 7.7 96 80-189 6-104 (144)
437 3l77_A Short-chain alcohol deh 83.5 2.7 9.4E-05 30.8 6.1 79 80-160 2-90 (235)
438 2h7i_A Enoyl-[acyl-carrier-pro 83.4 2.5 8.6E-05 31.8 6.0 108 79-189 6-148 (269)
439 4dqx_A Probable oxidoreductase 83.3 4.9 0.00017 30.5 7.6 76 79-159 26-110 (277)
440 3tqh_A Quinone oxidoreductase; 83.3 5.3 0.00018 31.0 7.9 95 75-189 148-245 (321)
441 2cfc_A 2-(R)-hydroxypropyl-COM 83.3 3.3 0.00011 30.5 6.5 78 81-159 3-89 (250)
442 2j8z_A Quinone oxidoreductase; 83.3 3 0.0001 32.9 6.6 98 76-190 159-262 (354)
443 4g65_A TRK system potassium up 83.1 4 0.00014 33.7 7.4 98 80-189 3-102 (461)
444 1yqd_A Sinapyl alcohol dehydro 83.0 3 0.0001 33.1 6.5 96 79-190 187-283 (366)
445 1xq1_A Putative tropinone redu 82.9 2.7 9.3E-05 31.4 6.0 80 79-159 13-101 (266)
446 3av4_A DNA (cytosine-5)-methyl 82.8 10 0.00034 35.8 10.5 82 79-164 850-943 (1330)
447 4e3z_A Putative oxidoreductase 82.7 2.4 8.4E-05 31.9 5.7 79 79-160 25-114 (272)
448 2a4k_A 3-oxoacyl-[acyl carrier 82.7 9.9 0.00034 28.4 9.1 76 80-160 6-90 (263)
449 2ae2_A Protein (tropinone redu 82.7 1.6 5.5E-05 32.7 4.6 78 79-159 8-96 (260)
450 2cdc_A Glucose dehydrogenase g 82.6 1.4 4.8E-05 35.1 4.4 92 80-190 181-279 (366)
451 1spx_A Short-chain reductase f 82.6 1.9 6.4E-05 32.7 5.0 77 80-159 6-95 (278)
452 3awd_A GOX2181, putative polyo 82.4 1.9 6.5E-05 32.1 4.9 80 79-159 12-99 (260)
453 1ae1_A Tropinone reductase-I; 82.2 1.9 6.6E-05 32.6 4.9 80 79-160 20-109 (273)
454 2hwk_A Helicase NSP2; rossman 81.5 1.4 4.6E-05 34.0 3.6 46 149-194 205-259 (320)
455 4dcm_A Ribosomal RNA large sub 81.2 18 0.00063 28.8 10.5 94 79-189 38-136 (375)
456 1g60_A Adenine-specific methyl 80.7 0.92 3.1E-05 34.3 2.6 57 131-189 6-74 (260)
457 4a0s_A Octenoyl-COA reductase/ 80.5 3.3 0.00011 33.8 6.0 101 76-189 217-336 (447)
458 3ioy_A Short-chain dehydrogena 80.1 2.4 8.2E-05 33.0 4.8 80 79-160 7-97 (319)
459 3tpc_A Short chain alcohol deh 80.0 3.8 0.00013 30.6 5.8 77 79-160 6-91 (257)
460 1eg2_A Modification methylase 80.0 0.9 3.1E-05 35.7 2.3 58 130-189 39-106 (319)
461 3s55_A Putative short-chain de 79.9 2.6 8.7E-05 32.0 4.9 80 79-160 9-109 (281)
462 3tzq_B Short-chain type dehydr 79.4 4.2 0.00014 30.7 5.9 77 79-160 10-95 (271)
463 3gaz_A Alcohol dehydrogenase s 79.4 1.8 6.1E-05 34.1 3.9 94 76-189 147-246 (343)
464 3f9i_A 3-oxoacyl-[acyl-carrier 79.0 6.6 0.00022 28.9 6.9 78 77-159 11-93 (249)
465 1ej6_A Lambda2; icosahedral, n 78.8 6.7 0.00023 35.8 7.5 97 77-183 819-918 (1289)
466 3dii_A Short-chain dehydrogena 78.8 11 0.00038 27.8 8.1 73 81-159 3-84 (247)
467 1geg_A Acetoin reductase; SDR 78.7 3 0.0001 31.1 4.8 76 81-159 3-88 (256)
468 3ic5_A Putative saccharopine d 78.4 10 0.00035 23.9 8.1 69 80-157 5-76 (118)
469 3imf_A Short chain dehydrogena 78.4 4.8 0.00017 30.0 6.0 79 79-159 5-92 (257)
470 3sxp_A ADP-L-glycero-D-mannohe 78.2 2.2 7.5E-05 33.6 4.1 81 79-160 9-100 (362)
471 1xkq_A Short-chain reductase f 78.1 2.7 9.2E-05 31.9 4.5 78 79-159 5-95 (280)
472 1qsg_A Enoyl-[acyl-carrier-pro 78.0 3.3 0.00011 31.0 5.0 78 79-160 8-97 (265)
473 3ucx_A Short chain dehydrogena 78.0 5.5 0.00019 29.9 6.2 78 79-158 10-96 (264)
474 3ius_A Uncharacterized conserv 78.0 19 0.00066 26.9 11.1 65 81-159 6-72 (286)
475 2gdz_A NAD+-dependent 15-hydro 78.0 4.8 0.00016 30.2 5.9 80 79-160 6-96 (267)
476 3h7a_A Short chain dehydrogena 77.2 3.2 0.00011 31.0 4.6 80 79-160 6-93 (252)
477 3ctm_A Carbonyl reductase; alc 77.0 2.9 0.0001 31.5 4.4 80 79-160 33-121 (279)
478 1xhl_A Short-chain dehydrogena 77.0 2.7 9.2E-05 32.3 4.2 80 79-159 25-115 (297)
479 2vn8_A Reticulon-4-interacting 76.8 3.9 0.00013 32.5 5.3 97 77-189 181-280 (375)
480 3b1f_A Putative prephenate deh 76.8 22 0.00074 26.9 10.2 89 81-186 7-98 (290)
481 3uf0_A Short-chain dehydrogena 76.6 2.4 8.2E-05 32.2 3.8 79 79-160 30-116 (273)
482 2x9g_A PTR1, pteridine reducta 76.4 6.1 0.00021 30.0 6.1 79 79-159 22-115 (288)
483 1oaa_A Sepiapterin reductase; 76.4 10 0.00035 28.1 7.3 61 80-141 6-73 (259)
484 2pd4_A Enoyl-[acyl-carrier-pro 76.2 4 0.00014 30.8 5.0 77 79-159 5-93 (275)
485 1xg5_A ARPG836; short chain de 76.2 9.3 0.00032 28.7 7.1 78 79-159 31-120 (279)
486 3sju_A Keto reductase; short-c 75.9 5.9 0.0002 30.0 5.9 79 79-159 23-110 (279)
487 3v8b_A Putative dehydrogenase, 75.8 7.3 0.00025 29.6 6.4 80 79-160 27-115 (283)
488 3i4f_A 3-oxoacyl-[acyl-carrier 75.7 3.4 0.00012 30.9 4.4 78 80-159 7-94 (264)
489 3gaf_A 7-alpha-hydroxysteroid 75.6 5.1 0.00018 29.9 5.4 80 79-160 11-99 (256)
490 4a27_A Synaptic vesicle membra 75.4 2.4 8.1E-05 33.4 3.6 97 75-190 138-239 (349)
491 2p91_A Enoyl-[acyl-carrier-pro 74.6 8.2 0.00028 29.2 6.4 80 79-159 20-108 (285)
492 3gpi_A NAD-dependent epimerase 73.9 14 0.00048 27.7 7.6 67 81-159 4-72 (286)
493 4gua_A Non-structural polyprot 73.8 2.5 8.6E-05 35.7 3.4 48 149-196 220-276 (670)
494 1yxm_A Pecra, peroxisomal tran 73.6 3.7 0.00013 31.4 4.3 80 79-159 17-109 (303)
495 3ce6_A Adenosylhomocysteinase; 73.5 6.9 0.00024 32.7 6.0 92 77-191 271-363 (494)
496 3tl3_A Short-chain type dehydr 73.4 13 0.00045 27.5 7.3 73 79-159 8-88 (257)
497 2g5c_A Prephenate dehydrogenas 73.4 26 0.0009 26.2 9.6 91 82-188 3-95 (281)
498 2wyu_A Enoyl-[acyl carrier pro 73.2 6.1 0.00021 29.5 5.3 78 79-159 7-95 (261)
499 3lyl_A 3-oxoacyl-(acyl-carrier 73.0 6.8 0.00023 28.8 5.5 80 79-160 4-92 (247)
500 2z1n_A Dehydrogenase; reductas 72.8 4.6 0.00016 30.1 4.5 78 79-159 6-94 (260)
No 1
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.84 E-value=1.5e-20 Score=145.27 Aligned_cols=140 Identities=11% Similarity=0.072 Sum_probs=106.0
Q ss_pred hhhHhhHHHHHHHhhhccCCCcccchHHHHHHh---hhcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHH
Q psy1107 42 QNKKKYWDLFYKRNETKFFKDRNWTVNEFHEFV---NQDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNF 118 (218)
Q Consensus 42 ~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~ 118 (218)
....++|+..|......|... .....+...+ ....++.+|||+|||+|..+..+++.+ .+|+|+|+|+.+++.
T Consensus 30 ~~~~~~Wd~~y~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~~vLD~GCG~G~~~~~La~~G--~~V~gvD~S~~~i~~ 105 (252)
T 2gb4_A 30 VLTLEDWKEKWVTRHISFHQE--QGHQLLKKHLDTFLKGQSGLRVFFPLCGKAIEMKWFADRG--HTVVGVEISEIGIRE 105 (252)
T ss_dssp CCCHHHHHHHHHHTCCTTCCT--TCCHHHHHHHHHHHTTCCSCEEEETTCTTCTHHHHHHHTT--CEEEEECSCHHHHHH
T ss_pred cCCHHHHHHHHhcCCCCcccC--CCCHHHHHHHHHhccCCCCCeEEEeCCCCcHHHHHHHHCC--CeEEEEECCHHHHHH
Confidence 345678999998765554221 1222233332 122467899999999999999999876 599999999999999
Q ss_pred HHhCCcc------------------cCCCceEEeccCCCcccccCCC-CCcccEEEechhhcCCCcchHHHHHHHHHHhc
Q psy1107 119 FKLNPLY------------------DASKMNVFPCDVTEDDILNQVP-HNSVDIATLIFVLSAIHPNKFSTVVKNLFIML 179 (218)
Q Consensus 119 ~~~~~~~------------------~~~~i~~~~~d~~~~~~~~~~~-~~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~L 179 (218)
|+++... ...++.+.++|+.+. +.. .++||+|++..+++++++++...++.++.++|
T Consensus 106 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l----~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~L 181 (252)
T 2gb4_A 106 FFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDL----PRANIGKFDRIWDRGALVAINPGDHDRYADIILSLL 181 (252)
T ss_dssp HHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTG----GGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTE
T ss_pred HHHhcccccccccccccccccccccCCCceEEEECccccC----CcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHc
Confidence 9765421 235799999999873 332 26899999999999998888889999999999
Q ss_pred cCCeEEEEEe
Q psy1107 180 KSGGIILFRD 189 (218)
Q Consensus 180 k~gG~li~~~ 189 (218)
||||.|++..
T Consensus 182 kpGG~l~l~~ 191 (252)
T 2gb4_A 182 RKEFQYLVAV 191 (252)
T ss_dssp EEEEEEEEEE
T ss_pred CCCeEEEEEE
Confidence 9999997544
No 2
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.83 E-value=5.3e-20 Score=142.87 Aligned_cols=112 Identities=16% Similarity=0.275 Sum_probs=94.9
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhcC--CccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccCCCCCcc
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSWS--KICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQVPHNSV 151 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~~--~~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~~ 151 (218)
...++.+|||+|||+|..+..+++.. ++++|+|+|+|+.+++.|+++....+ .++.++++|+.+ .++ ++|
T Consensus 67 ~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~----~~~--~~~ 140 (261)
T 4gek_A 67 FVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRD----IAI--ENA 140 (261)
T ss_dssp HCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTT----CCC--CSE
T ss_pred hCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccc----ccc--ccc
Confidence 35788999999999999999998763 56799999999999999998755433 579999999876 233 469
Q ss_pred cEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCCC
Q psy1107 152 DIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLH 193 (218)
Q Consensus 152 D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~~ 193 (218)
|+|++..+++++++.+...++++++++|||||.|++.+....
T Consensus 141 d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~ 182 (261)
T 4gek_A 141 SMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSF 182 (261)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCC
T ss_pred ccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCC
Confidence 999999999999887888999999999999999999875443
No 3
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.81 E-value=4.3e-19 Score=135.48 Aligned_cols=117 Identities=15% Similarity=0.200 Sum_probs=98.4
Q ss_pred HHhhhcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcc
Q psy1107 72 EFVNQDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSV 151 (218)
Q Consensus 72 ~~~~~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~ 151 (218)
.++....++.+|||+|||+|.++..++...|..+++++|+|+.+++.++.+....+ ++.+.++|+.+ .+++ ++|
T Consensus 37 ~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~d~~~----~~~~-~~f 110 (234)
T 3dtn_A 37 SIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL-KVKYIEADYSK----YDFE-EKY 110 (234)
T ss_dssp HTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT-TEEEEESCTTT----CCCC-SCE
T ss_pred HHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC-CEEEEeCchhc----cCCC-CCc
Confidence 33333567789999999999999999998877899999999999999998876554 89999999877 3344 689
Q ss_pred cEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCCCc
Q psy1107 152 DIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLHD 194 (218)
Q Consensus 152 D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~~~ 194 (218)
|+|++..+++|+++.....+++++.++|+|||.+++.+.....
T Consensus 111 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 153 (234)
T 3dtn_A 111 DMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVHGE 153 (234)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCS
T ss_pred eEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCC
Confidence 9999999999997556667999999999999999998855433
No 4
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.80 E-value=7.4e-20 Score=142.37 Aligned_cols=147 Identities=15% Similarity=0.191 Sum_probs=105.1
Q ss_pred hhHhhHHHHHHHhhhccCCC--cccchHHHHHHh-hhcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHH
Q psy1107 43 NKKKYWDLFYKRNETKFFKD--RNWTVNEFHEFV-NQDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFF 119 (218)
Q Consensus 43 ~~~~~w~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~ 119 (218)
....+|+.+|......+..+ ..|..+.+..++ ....++.+|||||||+|.++..++..+. .+|+|+|+|+.+++.|
T Consensus 16 ~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~vLDiGCG~G~~~~~~~~~~~-~~v~g~D~s~~~l~~a 94 (263)
T 2a14_A 16 LPRDYLATYYSFDGSPSPEAEMLKFNLECLHKTFGPGGLQGDTLIDIGSGPTIYQVLAACDSF-QDITLSDFTDRNREEL 94 (263)
T ss_dssp CHHHHHHHHCCCCCSCCHHHHHHHHHHHHHHHHHSTTSCCEEEEEESSCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHH
T ss_pred CHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHhcCCCCCCceEEEeCCCccHHHHHHHHhhh-cceeeccccHHHHHHH
Confidence 45678998886654443222 456666666664 2345678999999999988877665542 3799999999999999
Q ss_pred HhCCcccC------------------------------CCce-EEeccCCCcccccCCCCCcccEEEechhhcCCCc--c
Q psy1107 120 KLNPLYDA------------------------------SKMN-VFPCDVTEDDILNQVPHNSVDIATLIFVLSAIHP--N 166 (218)
Q Consensus 120 ~~~~~~~~------------------------------~~i~-~~~~d~~~~~~~~~~~~~~~D~i~~~~~l~~~~~--~ 166 (218)
++++...+ .++. ++++|+.+.....+...++||+|++..+++|+.+ +
T Consensus 95 ~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~ 174 (263)
T 2a14_A 95 EKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLD 174 (263)
T ss_dssp HHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHH
T ss_pred HHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHH
Confidence 87532211 0122 7889988732111223468999999999998632 5
Q ss_pred hHHHHHHHHHHhccCCeEEEEEec
Q psy1107 167 KFSTVVKNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 167 ~~~~~l~~~~~~Lk~gG~li~~~~ 190 (218)
+...++.++.++|||||.|++...
T Consensus 175 ~~~~~l~~i~r~LKPGG~li~~~~ 198 (263)
T 2a14_A 175 AYRAALCNLASLLKPGGHLVTTVT 198 (263)
T ss_dssp HHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHcCCCcEEEEEEe
Confidence 677899999999999999999864
No 5
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.79 E-value=6.4e-19 Score=136.36 Aligned_cols=104 Identities=19% Similarity=0.284 Sum_probs=89.3
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEE
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIAT 155 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~ 155 (218)
......+|||||||+|..+..++..+ .+|+|+|+|+.+++.|++. .++.+.++|+.+ .++++++||+|+
T Consensus 36 ~~~~~~~vLDvGcGtG~~~~~l~~~~--~~v~gvD~s~~ml~~a~~~-----~~v~~~~~~~e~----~~~~~~sfD~v~ 104 (257)
T 4hg2_A 36 VAPARGDALDCGCGSGQASLGLAEFF--ERVHAVDPGEAQIRQALRH-----PRVTYAVAPAED----TGLPPASVDVAI 104 (257)
T ss_dssp HSSCSSEEEEESCTTTTTHHHHHTTC--SEEEEEESCHHHHHTCCCC-----TTEEEEECCTTC----CCCCSSCEEEEE
T ss_pred hcCCCCCEEEEcCCCCHHHHHHHHhC--CEEEEEeCcHHhhhhhhhc-----CCceeehhhhhh----hcccCCcccEEE
Confidence 34556799999999999999999877 4899999999999877643 579999999877 577888999999
Q ss_pred echhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCCC
Q psy1107 156 LIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLH 193 (218)
Q Consensus 156 ~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~~ 193 (218)
+..++|++ +...++.++.++|||||.|++..++..
T Consensus 105 ~~~~~h~~---~~~~~~~e~~rvLkpgG~l~~~~~~~~ 139 (257)
T 4hg2_A 105 AAQAMHWF---DLDRFWAELRRVARPGAVFAAVTYGLT 139 (257)
T ss_dssp ECSCCTTC---CHHHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred EeeehhHh---hHHHHHHHHHHHcCCCCEEEEEECCCC
Confidence 99999888 466899999999999999999887644
No 6
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.79 E-value=1.1e-18 Score=133.44 Aligned_cols=141 Identities=19% Similarity=0.227 Sum_probs=108.5
Q ss_pred hHhhHHHHHHHhhhccCCCcccchHHHHHHh-hhcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhC
Q psy1107 44 KKKYWDLFYKRNETKFFKDRNWTVNEFHEFV-NQDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLN 122 (218)
Q Consensus 44 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~ 122 (218)
...+|+..|......|... .....+..++ ....++.+|||+|||+|.++..++.. ..+++++|+|+.+++.++++
T Consensus 32 ~~~~w~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~ 107 (235)
T 3lcc_A 32 EEGGWEKCWEEEITPWDQG--RATPLIVHLVDTSSLPLGRALVPGCGGGHDVVAMASP--ERFVVGLDISESALAKANET 107 (235)
T ss_dssp HHHHHHHHHHTTCCTTCCS--SCCHHHHHHHHTTCSCCEEEEEETCTTCHHHHHHCBT--TEEEEEECSCHHHHHHHHHH
T ss_pred CHHHHHHHHhcCCCCcccC--CCCHHHHHHHHhcCCCCCCEEEeCCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHH
Confidence 3567998887765555322 1223333333 12334569999999999999998764 46999999999999999988
Q ss_pred Cccc--CCCceEEeccCCCcccccCCCCCcccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCCC
Q psy1107 123 PLYD--ASKMNVFPCDVTEDDILNQVPHNSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLH 193 (218)
Q Consensus 123 ~~~~--~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~~ 193 (218)
.... ..++.+.++|+.+. . +..+||+|++..+++++++++...++..+.++|+|||.|++.++...
T Consensus 108 ~~~~~~~~~v~~~~~d~~~~----~-~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 175 (235)
T 3lcc_A 108 YGSSPKAEYFSFVKEDVFTW----R-PTELFDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYPIT 175 (235)
T ss_dssp HTTSGGGGGEEEECCCTTTC----C-CSSCEEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCS
T ss_pred hhccCCCcceEEEECchhcC----C-CCCCeeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEeccc
Confidence 6542 25799999998772 2 34489999999999999888999999999999999999999886543
No 7
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.79 E-value=9.1e-19 Score=134.61 Aligned_cols=122 Identities=16% Similarity=0.096 Sum_probs=99.0
Q ss_pred HHHHHhhhcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCC
Q psy1107 69 EFHEFVNQDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPH 148 (218)
Q Consensus 69 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~ 148 (218)
.+..++....++.+|||+|||+|.++..++..++ +|+++|+|+.+++.++++.. ..++.+.+.|+.+......++.
T Consensus 46 ~~~~~~~~~~~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~--~~~~~~~~~d~~~~~~~~~~~~ 121 (245)
T 3ggd_A 46 DLPRFELLFNPELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKENT--AANISYRLLDGLVPEQAAQIHS 121 (245)
T ss_dssp HHHHHTTTSCTTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSC--CTTEEEEECCTTCHHHHHHHHH
T ss_pred HHHHHhhccCCCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCc--ccCceEEECccccccccccccc
Confidence 3344445567788999999999999999998876 89999999999999998763 2479999999987432222211
Q ss_pred -CcccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCCCc
Q psy1107 149 -NSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLHD 194 (218)
Q Consensus 149 -~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~~~ 194 (218)
..||+|++..+++++++++...++..+.++|||||.+++.++...+
T Consensus 122 ~~~~d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 168 (245)
T 3ggd_A 122 EIGDANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGTGC 168 (245)
T ss_dssp HHCSCEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTTH
T ss_pred ccCccEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCccc
Confidence 2489999999999998888999999999999999999998876544
No 8
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.78 E-value=4.4e-19 Score=132.85 Aligned_cols=104 Identities=13% Similarity=0.036 Sum_probs=87.2
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcc-------------cCCCceEEeccCCCccccc
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLY-------------DASKMNVFPCDVTEDDILN 144 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~-------------~~~~i~~~~~d~~~~~~~~ 144 (218)
.++.+|||+|||+|..+..+++.+ .+|+|+|+|+.+++.|+++... ...++.+.++|+.+ .
T Consensus 21 ~~~~~vLD~GCG~G~~~~~la~~g--~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~----l 94 (203)
T 1pjz_A 21 VPGARVLVPLCGKSQDMSWLSGQG--YHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFA----L 94 (203)
T ss_dssp CTTCEEEETTTCCSHHHHHHHHHC--CEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSS----S
T ss_pred CCCCEEEEeCCCCcHhHHHHHHCC--CeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECcccc----C
Confidence 467899999999999999999875 5999999999999999876432 13579999999977 3
Q ss_pred CCCC-CcccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEE
Q psy1107 145 QVPH-NSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILF 187 (218)
Q Consensus 145 ~~~~-~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~ 187 (218)
+++. ++||+|++..+++++++++...+++++.++|||||.+++
T Consensus 95 ~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l 138 (203)
T 1pjz_A 95 TARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLL 138 (203)
T ss_dssp THHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEE
T ss_pred CcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence 3332 589999999999999877778899999999999998444
No 9
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.78 E-value=2.2e-18 Score=129.95 Aligned_cols=109 Identities=21% Similarity=0.253 Sum_probs=92.6
Q ss_pred hhcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEE
Q psy1107 75 NQDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIA 154 (218)
Q Consensus 75 ~~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i 154 (218)
....++.+|||+|||+|.++..++..+ .+++++|+|+.+++.++++.... .++.+.+.|+.+. . +.++||+|
T Consensus 47 ~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~d~~~~----~-~~~~fD~v 118 (216)
T 3ofk_A 47 LSSGAVSNGLEIGCAAGAFTEKLAPHC--KRLTVIDVMPRAIGRACQRTKRW-SHISWAATDILQF----S-TAELFDLI 118 (216)
T ss_dssp TTTSSEEEEEEECCTTSHHHHHHGGGE--EEEEEEESCHHHHHHHHHHTTTC-SSEEEEECCTTTC----C-CSCCEEEE
T ss_pred cccCCCCcEEEEcCCCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcccC-CCeEEEEcchhhC----C-CCCCccEE
Confidence 445567899999999999999998876 49999999999999999886653 3899999999772 2 46689999
Q ss_pred EechhhcCCC-cchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 155 TLIFVLSAIH-PNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 155 ~~~~~l~~~~-~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
++..+++|++ ++....++..+.++|+|||.+++....
T Consensus 119 ~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 156 (216)
T 3ofk_A 119 VVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSAR 156 (216)
T ss_dssp EEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred EEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEecC
Confidence 9999999997 355678899999999999999997643
No 10
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.78 E-value=1.8e-18 Score=130.01 Aligned_cols=141 Identities=19% Similarity=0.275 Sum_probs=108.1
Q ss_pred hHhhHHHHHHHhhh----ccCCCcccchHHHHHHh-hhcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHH
Q psy1107 44 KKKYWDLFYKRNET----KFFKDRNWTVNEFHEFV-NQDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNF 118 (218)
Q Consensus 44 ~~~~w~~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~ 118 (218)
..++|+.+|..... .++.. ...+..++ ....++.+|||+|||+|.++..++..++. +++++|+|+.+++.
T Consensus 6 ~~~~W~~~y~~~~~~~~~~~~~~----~~~~~~~l~~~~~~~~~vLdiGcG~G~~~~~l~~~~~~-~v~~~D~s~~~~~~ 80 (215)
T 2pxx_A 6 EVEYWDQRYQGAADSAPYDWFGD----FSSFRALLEPELRPEDRILVLGCGNSALSYELFLGGFP-NVTSVDYSSVVVAA 80 (215)
T ss_dssp CHHHHHHHTTTTTTSCCCCTTCC----HHHHHHHHGGGCCTTCCEEEETCTTCSHHHHHHHTTCC-CEEEEESCHHHHHH
T ss_pred chhHHHHHhccCCCCCCcccccC----HHHHHHHHHHhcCCCCeEEEECCCCcHHHHHHHHcCCC-cEEEEeCCHHHHHH
Confidence 45689998876542 22122 12333333 33467789999999999999999988754 89999999999999
Q ss_pred HHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEechhhcCCC-------------cchHHHHHHHHHHhccCCeEE
Q psy1107 119 FKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATLIFVLSAIH-------------PNKFSTVVKNLFIMLKSGGII 185 (218)
Q Consensus 119 ~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~~~~l~~~~-------------~~~~~~~l~~~~~~Lk~gG~l 185 (218)
++.+... ..++.+...|+.+ .+++.++||+|++..+++++. ..+...++..+.++|+|||.+
T Consensus 81 a~~~~~~-~~~i~~~~~d~~~----~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 155 (215)
T 2pxx_A 81 MQACYAH-VPQLRWETMDVRK----LDFPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRF 155 (215)
T ss_dssp HHHHTTT-CTTCEEEECCTTS----CCSCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEE
T ss_pred HHHhccc-CCCcEEEEcchhc----CCCCCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEE
Confidence 9987653 3578999999877 355667899999988876654 346789999999999999999
Q ss_pred EEEecCCCc
Q psy1107 186 LFRDYGLHD 194 (218)
Q Consensus 186 i~~~~~~~~ 194 (218)
++.++....
T Consensus 156 i~~~~~~~~ 164 (215)
T 2pxx_A 156 ISMTSAAPH 164 (215)
T ss_dssp EEEESCCHH
T ss_pred EEEeCCCcH
Confidence 999987654
No 11
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.78 E-value=2.7e-18 Score=133.25 Aligned_cols=113 Identities=19% Similarity=0.228 Sum_probs=98.4
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEE
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIAT 155 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~ 155 (218)
...++.+|||+|||+|.++..++... ..+++++|+|+.+++.++++.... .++.+.+.|+.+ .+++.++||+|+
T Consensus 52 ~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~d~~~----~~~~~~~fD~v~ 125 (266)
T 3ujc_A 52 ELNENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSGN-NKIIFEANDILT----KEFPENNFDLIY 125 (266)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCSC-TTEEEEECCTTT----CCCCTTCEEEEE
T ss_pred CCCCCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhcC-CCeEEEECcccc----CCCCCCcEEEEe
Confidence 34567899999999999999999874 369999999999999999987654 689999999987 456677999999
Q ss_pred echhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCCCc
Q psy1107 156 LIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLHD 194 (218)
Q Consensus 156 ~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~~~ 194 (218)
+..+++|+++.+...++..+.++|+|||.+++.++....
T Consensus 126 ~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 164 (266)
T 3ujc_A 126 SRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATE 164 (266)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESC
T ss_pred HHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 999999998779999999999999999999998865443
No 12
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.77 E-value=1.9e-17 Score=124.70 Aligned_cols=114 Identities=17% Similarity=0.174 Sum_probs=95.5
Q ss_pred HHHHHhhhcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCC
Q psy1107 69 EFHEFVNQDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPH 148 (218)
Q Consensus 69 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~ 148 (218)
.+...+....++.+|||+|||+|.++..++..+ .+++++|+|+.+++.++.. ...++.+.++|+.+ . ++.
T Consensus 36 ~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~~D~s~~~~~~a~~~---~~~~~~~~~~d~~~----~-~~~ 105 (218)
T 3ou2_A 36 AALERLRAGNIRGDVLELASGTGYWTRHLSGLA--DRVTALDGSAEMIAEAGRH---GLDNVEFRQQDLFD----W-TPD 105 (218)
T ss_dssp HHHHHHTTTTSCSEEEEESCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHGGG---CCTTEEEEECCTTS----C-CCS
T ss_pred HHHHHHhcCCCCCeEEEECCCCCHHHHHHHhcC--CeEEEEeCCHHHHHHHHhc---CCCCeEEEeccccc----C-CCC
Confidence 344444545677899999999999999998874 5999999999999999982 22579999999876 2 566
Q ss_pred CcccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCC
Q psy1107 149 NSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGL 192 (218)
Q Consensus 149 ~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~ 192 (218)
++||+|++..+++|+++.....+++.+.++|+|||.+++.+...
T Consensus 106 ~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 106 RQWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred CceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 79999999999999986556899999999999999999988665
No 13
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.76 E-value=3.8e-18 Score=130.90 Aligned_cols=108 Identities=19% Similarity=0.257 Sum_probs=91.7
Q ss_pred CCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCccc-CCCceEEeccCCCcccccCCCCCcccEEEec
Q psy1107 79 GEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYD-ASKMNVFPCDVTEDDILNQVPHNSVDIATLI 157 (218)
Q Consensus 79 ~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~-~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~~ 157 (218)
++.+|||+|||+|.++..++..+ ..+++++|+|+.+++.++++.... ..++.+...|+.+ .+++.++||+|++.
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~----~~~~~~~fD~v~~~ 153 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQD----FTPEPDSYDVIWIQ 153 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGG----CCCCSSCEEEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhh----cCCCCCCEEEEEEc
Confidence 57899999999999999988776 359999999999999999887654 3468888998766 34556689999999
Q ss_pred hhhcCCCcchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 158 FVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 158 ~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
.+++|+++.....++..+.++|+|||.+++.+..
T Consensus 154 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 187 (241)
T 2ex4_A 154 WVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNM 187 (241)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred chhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEcc
Confidence 9999997555678999999999999999997754
No 14
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.75 E-value=6.9e-18 Score=130.18 Aligned_cols=108 Identities=16% Similarity=0.196 Sum_probs=93.4
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEe
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATL 156 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~ 156 (218)
..++.+|||+|||+|.++..++..+ ..+++++|+|+.+++.++++.... .++.+.+.|+.. .+++.++||+|++
T Consensus 91 ~~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~d~~~----~~~~~~~fD~v~~ 164 (254)
T 1xtp_A 91 GHGTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAGM-PVGKFILASMET----ATLPPNTYDLIVI 164 (254)
T ss_dssp TCCCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTTS-SEEEEEESCGGG----CCCCSSCEEEEEE
T ss_pred ccCCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhccC-CceEEEEccHHH----CCCCCCCeEEEEE
Confidence 3467899999999999999998876 348999999999999999876543 578899998876 3456678999999
Q ss_pred chhhcCCCcchHHHHHHHHHHhccCCeEEEEEec
Q psy1107 157 IFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 157 ~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~ 190 (218)
..+++|+++.+...++..+.++|+|||.+++.+.
T Consensus 165 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 165 QWTAIYLTDADFVKFFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEec
Confidence 9999999877789999999999999999999874
No 15
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.75 E-value=1.4e-17 Score=125.89 Aligned_cols=105 Identities=21% Similarity=0.263 Sum_probs=89.8
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEe
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATL 156 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~ 156 (218)
..++.+|||+|||+|.++..++..+ .+++++|+++.+++.++.+.. .++.+..+|+.+ .+++ ++||+|++
T Consensus 43 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~---~~~~~~~~d~~~----~~~~-~~fD~v~~ 112 (220)
T 3hnr_A 43 NKSFGNVLEFGVGTGNLTNKLLLAG--RTVYGIEPSREMRMIAKEKLP---KEFSITEGDFLS----FEVP-TSIDTIVS 112 (220)
T ss_dssp HTCCSEEEEECCTTSHHHHHHHHTT--CEEEEECSCHHHHHHHHHHSC---TTCCEESCCSSS----CCCC-SCCSEEEE
T ss_pred ccCCCeEEEeCCCCCHHHHHHHhCC--CeEEEEeCCHHHHHHHHHhCC---CceEEEeCChhh----cCCC-CCeEEEEE
Confidence 3477899999999999999998874 599999999999999998755 578999999877 3444 68999999
Q ss_pred chhhcCCCcchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 157 IFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 157 ~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
..+++|+++.....++.++.++|||||.+++.+..
T Consensus 113 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 147 (220)
T 3hnr_A 113 TYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTI 147 (220)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEEC
T ss_pred CcchhcCChHHHHHHHHHHHHhcCCCCEEEEEecc
Confidence 99999997544455999999999999999998744
No 16
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.75 E-value=5.3e-18 Score=127.10 Aligned_cols=115 Identities=14% Similarity=0.103 Sum_probs=94.9
Q ss_pred hhcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEE
Q psy1107 75 NQDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIA 154 (218)
Q Consensus 75 ~~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i 154 (218)
....++.+|||+|||+|..+..++.. +..+++++|+|+.+++.++++....+.++.+.+.|+.+ .+++.++||+|
T Consensus 19 ~~~~~~~~vLDiGcG~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~----~~~~~~~fD~v 93 (209)
T 2p8j_A 19 NESNLDKTVLDCGAGGDLPPLSIFVE-DGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRK----LPFKDESMSFV 93 (209)
T ss_dssp HHSSSCSEEEEESCCSSSCTHHHHHH-TTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTS----CCSCTTCEEEE
T ss_pred hccCCCCEEEEECCCCCHHHHHHHHh-CCCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhh----CCCCCCceeEE
Confidence 45567889999999999985444333 33699999999999999998765445678999999877 45666789999
Q ss_pred EechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCCCc
Q psy1107 155 TLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLHD 194 (218)
Q Consensus 155 ~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~~~ 194 (218)
++..+++|+++.+...+++.+.++|+|||.+++.++...+
T Consensus 94 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 133 (209)
T 2p8j_A 94 YSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFLTTKD 133 (209)
T ss_dssp EECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEETTS
T ss_pred EEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEecccc
Confidence 9999999998778999999999999999999998876544
No 17
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.75 E-value=7.7e-18 Score=127.14 Aligned_cols=110 Identities=19% Similarity=0.248 Sum_probs=92.6
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC------CCceEEeccCCCcccccCCCCCc
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA------SKMNVFPCDVTEDDILNQVPHNS 150 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~------~~i~~~~~d~~~~~~~~~~~~~~ 150 (218)
..++.+|||+|||+|.++..++..++..+++++|+|+.+++.++++....+ .++.+.++|+.. ...+.++
T Consensus 27 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~----~~~~~~~ 102 (217)
T 3jwh_A 27 QSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTY----QDKRFHG 102 (217)
T ss_dssp HTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTS----CCGGGCS
T ss_pred hcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCccc----ccccCCC
Confidence 346789999999999999999988776799999999999999998754332 279999999855 3344468
Q ss_pred ccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEec
Q psy1107 151 VDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 151 ~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~ 190 (218)
||+|++..+++|+++.+...+++.+.++|||||.+++...
T Consensus 103 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 103 YDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp CSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred cCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccC
Confidence 9999999999999766778999999999999998877664
No 18
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.75 E-value=4.6e-18 Score=130.35 Aligned_cols=109 Identities=18% Similarity=0.280 Sum_probs=91.7
Q ss_pred hhcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEE
Q psy1107 75 NQDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIA 154 (218)
Q Consensus 75 ~~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i 154 (218)
....++.+|||+|||+|.++..++..+ .+++++|+|+.+++.++.+ +.+..+|+.+. ..++++++||+|
T Consensus 37 ~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~-------~~~~~~d~~~~--~~~~~~~~fD~i 105 (240)
T 3dli_A 37 PYFKGCRRVLDIGCGRGEFLELCKEEG--IESIGVDINEDMIKFCEGK-------FNVVKSDAIEY--LKSLPDKYLDGV 105 (240)
T ss_dssp GGTTTCSCEEEETCTTTHHHHHHHHHT--CCEEEECSCHHHHHHHHTT-------SEEECSCHHHH--HHTSCTTCBSEE
T ss_pred hhhcCCCeEEEEeCCCCHHHHHHHhCC--CcEEEEECCHHHHHHHHhh-------cceeeccHHHH--hhhcCCCCeeEE
Confidence 445677899999999999999998875 4899999999999999876 67777776552 125677899999
Q ss_pred EechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCCCc
Q psy1107 155 TLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLHD 194 (218)
Q Consensus 155 ~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~~~ 194 (218)
++..+++|+++.+...++.++.++|||||.+++.......
T Consensus 106 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 145 (240)
T 3dli_A 106 MISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNPTS 145 (240)
T ss_dssp EEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTS
T ss_pred EECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcch
Confidence 9999999998778899999999999999999998765443
No 19
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.75 E-value=2.2e-17 Score=126.45 Aligned_cols=109 Identities=18% Similarity=0.144 Sum_probs=93.9
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEE
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIAT 155 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~ 155 (218)
...++.+|||+|||+|.++..++..+ .+++++|+++.+++.++.+.. ..++.+++.|+.+ .+++.++||+|+
T Consensus 50 ~~~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~--~~~~~~~~~d~~~----~~~~~~~fD~v~ 121 (242)
T 3l8d_A 50 YVKKEAEVLDVGCGDGYGTYKLSRTG--YKAVGVDISEVMIQKGKERGE--GPDLSFIKGDLSS----LPFENEQFEAIM 121 (242)
T ss_dssp HSCTTCEEEEETCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHTTTC--BTTEEEEECBTTB----CSSCTTCEEEEE
T ss_pred HcCCCCeEEEEcCCCCHHHHHHHHcC--CeEEEEECCHHHHHHHHhhcc--cCCceEEEcchhc----CCCCCCCccEEE
Confidence 34578899999999999999999875 599999999999999998852 3579999999887 456677999999
Q ss_pred echhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCCCc
Q psy1107 156 LIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLHD 194 (218)
Q Consensus 156 ~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~~~ 194 (218)
+..+++|++ +...++..+.++|+|||.+++..+....
T Consensus 122 ~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~~~~~~ 158 (242)
T 3l8d_A 122 AINSLEWTE--EPLRALNEIKRVLKSDGYACIAILGPTA 158 (242)
T ss_dssp EESCTTSSS--CHHHHHHHHHHHEEEEEEEEEEEECTTC
T ss_pred EcChHhhcc--CHHHHHHHHHHHhCCCeEEEEEEcCCcc
Confidence 999999994 7789999999999999999998865443
No 20
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.75 E-value=1.2e-17 Score=125.50 Aligned_cols=113 Identities=19% Similarity=0.199 Sum_probs=94.8
Q ss_pred hHHHHHHhhhcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCC
Q psy1107 67 VNEFHEFVNQDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQV 146 (218)
Q Consensus 67 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 146 (218)
...+..++....++.+|||+|||+|.++..++..+ .+++++|+|+.+++.++.+. ++.+...|+.. .+
T Consensus 31 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~-----~~~~~~~d~~~----~~- 98 (211)
T 3e23_A 31 SATLTKFLGELPAGAKILELGCGAGYQAEAMLAAG--FDVDATDGSPELAAEASRRL-----GRPVRTMLFHQ----LD- 98 (211)
T ss_dssp CHHHHHHHTTSCTTCEEEESSCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHH-----TSCCEECCGGG----CC-
T ss_pred hHHHHHHHHhcCCCCcEEEECCCCCHHHHHHHHcC--CeEEEECCCHHHHHHHHHhc-----CCceEEeeecc----CC-
Confidence 44555555566778899999999999999998874 59999999999999999864 46777788766 23
Q ss_pred CCCcccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 147 PHNSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 147 ~~~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
+.++||+|++..+++|+++++...++..+.++|+|||.+++....
T Consensus 99 ~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 143 (211)
T 3e23_A 99 AIDAYDAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASYKS 143 (211)
T ss_dssp CCSCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCcEEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcC
Confidence 567899999999999998778899999999999999999997643
No 21
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.75 E-value=9.1e-18 Score=126.88 Aligned_cols=110 Identities=22% Similarity=0.316 Sum_probs=92.2
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC------CCceEEeccCCCcccccCCCCCc
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA------SKMNVFPCDVTEDDILNQVPHNS 150 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~------~~i~~~~~d~~~~~~~~~~~~~~ 150 (218)
..++.+|||+|||+|.++..++..++..+++++|+|+.+++.++++....+ .++.+.+.|+.. .+.+.++
T Consensus 27 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~----~~~~~~~ 102 (219)
T 3jwg_A 27 SVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVY----RDKRFSG 102 (219)
T ss_dssp HTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSS----CCGGGTT
T ss_pred hcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccc----cccccCC
Confidence 356789999999999999999988876799999999999999998754322 278999999855 3444568
Q ss_pred ccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEec
Q psy1107 151 VDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 151 ~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~ 190 (218)
||+|++..+++|+++.+...+++.+.++|||||+++....
T Consensus 103 fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~ 142 (219)
T 3jwg_A 103 YDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPN 142 (219)
T ss_dssp CSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred CCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccc
Confidence 9999999999999766668999999999999997776654
No 22
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.75 E-value=1.5e-17 Score=123.56 Aligned_cols=106 Identities=18% Similarity=0.222 Sum_probs=90.8
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC-CCceEEeccCCCcccccCCCCCcccEEEe
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA-SKMNVFPCDVTEDDILNQVPHNSVDIATL 156 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~~~~D~i~~ 156 (218)
.++.+|||+|||+|.++..++..+ .+++++|+|+.+++.++++....+ .++.+...|+.+ .++ .++||+|++
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~----~~~-~~~~D~v~~ 103 (199)
T 2xvm_A 31 VKPGKTLDLGCGNGRNSLYLAANG--YDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNN----LTF-DRQYDFILS 103 (199)
T ss_dssp SCSCEEEEETCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGG----CCC-CCCEEEEEE
T ss_pred cCCCeEEEEcCCCCHHHHHHHHCC--CeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhh----CCC-CCCceEEEE
Confidence 466799999999999999998874 599999999999999998755443 378999999876 233 568999999
Q ss_pred chhhcCCCcchHHHHHHHHHHhccCCeEEEEEec
Q psy1107 157 IFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 157 ~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~ 190 (218)
..+++|+++++...++..+.++|+|||.+++.+.
T Consensus 104 ~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 137 (199)
T 2xvm_A 104 TVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAA 137 (199)
T ss_dssp ESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred cchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEe
Confidence 9999999878899999999999999999887653
No 23
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.75 E-value=1.5e-17 Score=124.18 Aligned_cols=105 Identities=18% Similarity=0.265 Sum_probs=92.3
Q ss_pred CcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEechh
Q psy1107 80 EGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATLIFV 159 (218)
Q Consensus 80 ~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~~~~ 159 (218)
+.+|||+|||+|.++..++..+ .+++++|+|+.+++.++.+. .++.+.++|+.+ .+++.++||+|++..+
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~----~~~~~~~~d~~~----~~~~~~~fD~v~~~~~ 111 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLG--HQIEGLEPATRLVELARQTH----PSVTFHHGTITD----LSDSPKRWAGLLAWYS 111 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTT--CCEEEECCCHHHHHHHHHHC----TTSEEECCCGGG----GGGSCCCEEEEEEESS
T ss_pred CCeEEEecCCCCHHHHHHHhcC--CeEEEEeCCHHHHHHHHHhC----CCCeEEeCcccc----cccCCCCeEEEEehhh
Confidence 7899999999999999998875 48999999999999999863 378999999876 3455679999999999
Q ss_pred hcCCCcchHHHHHHHHHHhccCCeEEEEEecCCCc
Q psy1107 160 LSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLHD 194 (218)
Q Consensus 160 l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~~~ 194 (218)
++|+++++...+++.+.++|+|||.+++..+....
T Consensus 112 l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~ 146 (203)
T 3h2b_A 112 LIHMGPGELPDALVALRMAVEDGGGLLMSFFSGPS 146 (203)
T ss_dssp STTCCTTTHHHHHHHHHHTEEEEEEEEEEEECCSS
T ss_pred HhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccCCc
Confidence 99998789999999999999999999998865544
No 24
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.74 E-value=5.7e-18 Score=127.88 Aligned_cols=112 Identities=17% Similarity=0.183 Sum_probs=96.0
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhcC-CccEEEEEeCCHHHHHHHHhCCcccC-CCceEEeccCCCcccccCCCCCcccE
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSWS-KICYIHACDISPRAVNFFKLNPLYDA-SKMNVFPCDVTEDDILNQVPHNSVDI 153 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~~-~~~~v~~~D~s~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~~~~D~ 153 (218)
...++.+|||+|||+|.++..++..+ |..+++++|+|+.+++.++.+....+ .++.+...|+.+ .+++.++||+
T Consensus 34 ~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~----~~~~~~~fD~ 109 (219)
T 3dh0_A 34 GLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENK----IPLPDNTVDF 109 (219)
T ss_dssp TCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTB----CSSCSSCEEE
T ss_pred CCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeccccc----CCCCCCCeeE
Confidence 34567899999999999999999885 66799999999999999998865444 479999999876 4566778999
Q ss_pred EEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCCC
Q psy1107 154 ATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLH 193 (218)
Q Consensus 154 i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~~ 193 (218)
|++..++++++ +...+++.+.++|+|||.+++.++...
T Consensus 110 v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~i~~~~~~ 147 (219)
T 3dh0_A 110 IFMAFTFHELS--EPLKFLEELKRVAKPFAYLAIIDWKKE 147 (219)
T ss_dssp EEEESCGGGCS--SHHHHHHHHHHHEEEEEEEEEEEECSS
T ss_pred EEeehhhhhcC--CHHHHHHHHHHHhCCCeEEEEEEeccc
Confidence 99999999994 788999999999999999999875544
No 25
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.74 E-value=2.5e-17 Score=124.04 Aligned_cols=105 Identities=19% Similarity=0.211 Sum_probs=91.2
Q ss_pred CcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccCCCCCcccEEEec
Q psy1107 80 EGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQVPHNSVDIATLI 157 (218)
Q Consensus 80 ~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~~D~i~~~ 157 (218)
+.+|||+|||+|.++..++.. +..+++++|+|+.+++.++.+....+ .++.+.+.|+.+ .+++.++||+|++.
T Consensus 44 ~~~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~----~~~~~~~~D~v~~~ 118 (219)
T 3dlc_A 44 AGTCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHN----IPIEDNYADLIVSR 118 (219)
T ss_dssp EEEEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTB----CSSCTTCEEEEEEE
T ss_pred CCEEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHH----CCCCcccccEEEEC
Confidence 349999999999999999887 56799999999999999998865443 479999999977 45667799999999
Q ss_pred hhhcCCCcchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 158 FVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 158 ~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
.+++|+ .+...+++.+.++|+|||.+++.+..
T Consensus 119 ~~l~~~--~~~~~~l~~~~~~L~pgG~l~~~~~~ 150 (219)
T 3dlc_A 119 GSVFFW--EDVATAFREIYRILKSGGKTYIGGGF 150 (219)
T ss_dssp SCGGGC--SCHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred chHhhc--cCHHHHHHHHHHhCCCCCEEEEEecc
Confidence 999999 47889999999999999999998644
No 26
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.74 E-value=1.2e-17 Score=129.54 Aligned_cols=108 Identities=17% Similarity=0.218 Sum_probs=92.3
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC-CCceEEeccCCCcccccCCCCCcccEE
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA-SKMNVFPCDVTEDDILNQVPHNSVDIA 154 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~~~~D~i 154 (218)
...++.+|||+|||+|.++..++..++ +++++|+|+.+++.++++....+ .++.+..+|+.+ .++++++||+|
T Consensus 34 ~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~----l~~~~~~fD~V 107 (260)
T 1vl5_A 34 ALKGNEEVLDVATGGGHVANAFAPFVK--KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQ----MPFTDERFHIV 107 (260)
T ss_dssp TCCSCCEEEEETCTTCHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-C----CCSCTTCEEEE
T ss_pred CCCCCCEEEEEeCCCCHHHHHHHHhCC--EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHh----CCCCCCCEEEE
Confidence 345778999999999999999998774 99999999999999988754433 579999999877 45677799999
Q ss_pred EechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 155 TLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 155 ~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
++..+++|++ +...++.++.++|||||.|++.+..
T Consensus 108 ~~~~~l~~~~--d~~~~l~~~~r~LkpgG~l~~~~~~ 142 (260)
T 1vl5_A 108 TCRIAAHHFP--NPASFVSEAYRVLKKGGQLLLVDNS 142 (260)
T ss_dssp EEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred EEhhhhHhcC--CHHHHHHHHHHHcCCCCEEEEEEcC
Confidence 9999999995 7789999999999999999997644
No 27
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.74 E-value=2.6e-17 Score=125.30 Aligned_cols=111 Identities=21% Similarity=0.368 Sum_probs=93.2
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCC------CceEEeccCCCcccccCCCCCc
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDAS------KMNVFPCDVTEDDILNQVPHNS 150 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~------~i~~~~~d~~~~~~~~~~~~~~ 150 (218)
..++.+|||+|||+|.++..++..+ .+++++|+++.+++.++.+....+. ++.+...|+.. .+++.++
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~----~~~~~~~ 101 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASKG--YSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASS----LSFHDSS 101 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTS----CCSCTTC
T ss_pred CCCCCeEEEECCCCCHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccc----cCCCCCc
Confidence 4578899999999999999998874 5999999999999999987654332 57889999876 4556779
Q ss_pred ccEEEechhhcCCC-cchHHHHHHHHHHhccCCeEEEEEecCCC
Q psy1107 151 VDIATLIFVLSAIH-PNKFSTVVKNLFIMLKSGGIILFRDYGLH 193 (218)
Q Consensus 151 ~D~i~~~~~l~~~~-~~~~~~~l~~~~~~Lk~gG~li~~~~~~~ 193 (218)
||+|++..++++++ +.....+++.+.++|+|||.+++.++...
T Consensus 102 ~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 145 (235)
T 3sm3_A 102 FDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQN 145 (235)
T ss_dssp EEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCC
T ss_pred eeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcc
Confidence 99999999999996 34455899999999999999999886543
No 28
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.74 E-value=9.1e-18 Score=131.19 Aligned_cols=109 Identities=23% Similarity=0.286 Sum_probs=94.8
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC-CCceEEeccCCCcccccCCCCCcccEE
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA-SKMNVFPCDVTEDDILNQVPHNSVDIA 154 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~~~~D~i 154 (218)
...++.+|||+|||+|.++..++..+|..+++++|+++.+++.++.+....+ .++.+...|+.. .+++.++||+|
T Consensus 34 ~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~----~~~~~~~fD~v 109 (276)
T 3mgg_A 34 VYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFS----LPFEDSSFDHI 109 (276)
T ss_dssp CCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGG----CCSCTTCEEEE
T ss_pred cCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEccccc----CCCCCCCeeEE
Confidence 3467889999999999999999998877899999999999999998765443 579999999876 45667799999
Q ss_pred EechhhcCCCcchHHHHHHHHHHhccCCeEEEEEec
Q psy1107 155 TLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 155 ~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~ 190 (218)
++..+++|++ +...++..+.++|+|||.+++.+.
T Consensus 110 ~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~~~~~ 143 (276)
T 3mgg_A 110 FVCFVLEHLQ--SPEEALKSLKKVLKPGGTITVIEG 143 (276)
T ss_dssp EEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEechhhhcC--CHHHHHHHHHHHcCCCcEEEEEEc
Confidence 9999999995 677999999999999999999763
No 29
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.73 E-value=2.4e-17 Score=126.53 Aligned_cols=110 Identities=18% Similarity=0.140 Sum_probs=92.6
Q ss_pred HHhhhcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcc
Q psy1107 72 EFVNQDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSV 151 (218)
Q Consensus 72 ~~~~~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~ 151 (218)
..+....++.+|||+|||+|.++..++..++ +++|+|+|+.+++.++++... ++.+.+.|+.+. .++++|
T Consensus 35 ~~l~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~---~v~~~~~d~~~~-----~~~~~f 104 (250)
T 2p7i_A 35 RAFTPFFRPGNLLELGSFKGDFTSRLQEHFN--DITCVEASEEAISHAQGRLKD---GITYIHSRFEDA-----QLPRRY 104 (250)
T ss_dssp HHHGGGCCSSCEEEESCTTSHHHHHHTTTCS--CEEEEESCHHHHHHHHHHSCS---CEEEEESCGGGC-----CCSSCE
T ss_pred HHHHhhcCCCcEEEECCCCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhhhC---CeEEEEccHHHc-----CcCCcc
Confidence 3334445678999999999999999998775 899999999999999987543 789999988762 356689
Q ss_pred cEEEechhhcCCCcchHHHHHHHHH-HhccCCeEEEEEecCCC
Q psy1107 152 DIATLIFVLSAIHPNKFSTVVKNLF-IMLKSGGIILFRDYGLH 193 (218)
Q Consensus 152 D~i~~~~~l~~~~~~~~~~~l~~~~-~~Lk~gG~li~~~~~~~ 193 (218)
|+|++..+++|++ +...+++++. ++|||||.+++......
T Consensus 105 D~v~~~~~l~~~~--~~~~~l~~~~~~~LkpgG~l~i~~~~~~ 145 (250)
T 2p7i_A 105 DNIVLTHVLEHID--DPVALLKRINDDWLAEGGRLFLVCPNAN 145 (250)
T ss_dssp EEEEEESCGGGCS--SHHHHHHHHHHTTEEEEEEEEEEEECTT
T ss_pred cEEEEhhHHHhhc--CHHHHHHHHHHHhcCCCCEEEEEcCChH
Confidence 9999999999995 6789999999 99999999999875443
No 30
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.73 E-value=1.2e-17 Score=131.67 Aligned_cols=112 Identities=14% Similarity=0.232 Sum_probs=91.2
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC------------------------------
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA------------------------------ 127 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~------------------------------ 127 (218)
.++.+|||||||+|.++..++...+..+|+|+|+|+.+++.|+++.....
T Consensus 45 ~~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (292)
T 3g07_A 45 FRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRS 124 (292)
T ss_dssp TTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC----------------------------------
T ss_pred cCCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccc
Confidence 46789999999999999999998766799999999999999998854322
Q ss_pred -----------------------------CCceEEeccCCCccc-ccCCCCCcccEEEechhhcCC----CcchHHHHHH
Q psy1107 128 -----------------------------SKMNVFPCDVTEDDI-LNQVPHNSVDIATLIFVLSAI----HPNKFSTVVK 173 (218)
Q Consensus 128 -----------------------------~~i~~~~~d~~~~~~-~~~~~~~~~D~i~~~~~l~~~----~~~~~~~~l~ 173 (218)
.++.|.++|+..... ...+..++||+|+|..+++|+ .++....+++
T Consensus 125 ~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~ 204 (292)
T 3g07_A 125 CFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFR 204 (292)
T ss_dssp -----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred cccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHH
Confidence 479999999876321 123456799999999998777 3457889999
Q ss_pred HHHHhccCCeEEEEEe
Q psy1107 174 NLFIMLKSGGIILFRD 189 (218)
Q Consensus 174 ~~~~~Lk~gG~li~~~ 189 (218)
++.++|+|||+|++..
T Consensus 205 ~~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 205 RIYRHLRPGGILVLEP 220 (292)
T ss_dssp HHHHHEEEEEEEEEEC
T ss_pred HHHHHhCCCcEEEEec
Confidence 9999999999999964
No 31
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.73 E-value=2.6e-17 Score=129.32 Aligned_cols=110 Identities=16% Similarity=0.126 Sum_probs=95.0
Q ss_pred hhcCCCcEEEEecCCCchhHHHHhhcCCc-cEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccE
Q psy1107 75 NQDVGEGVLLEVGCGVGNFIFPLLSWSKI-CYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDI 153 (218)
Q Consensus 75 ~~~~~~~~vLDiGcG~G~~~~~~~~~~~~-~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~ 153 (218)
....++.+|||+|||+|.++..++...|. .+++++|+|+.+++.++++....+.++.+.+.|+.+ .+++ ++||+
T Consensus 18 ~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~----~~~~-~~fD~ 92 (284)
T 3gu3_A 18 WKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATE----IELN-DKYDI 92 (284)
T ss_dssp SCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTT----CCCS-SCEEE
T ss_pred hccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhh----cCcC-CCeeE
Confidence 34567889999999999999999988763 799999999999999998866555689999999986 3333 48999
Q ss_pred EEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 154 ATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 154 i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
|++..++++++ +...++.++.++|+|||.+++.+..
T Consensus 93 v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 93 AICHAFLLHMT--TPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp EEEESCGGGCS--SHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEECChhhcCC--CHHHHHHHHHHHcCCCCEEEEEecc
Confidence 99999999995 7789999999999999999998754
No 32
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.73 E-value=7.2e-17 Score=125.01 Aligned_cols=105 Identities=23% Similarity=0.349 Sum_probs=91.3
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEE
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIAT 155 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~ 155 (218)
...++.+|||+|||+|.++..++..+ .+++++|+|+.+++.++.+......++.+..+|+.+ .++++++||+|+
T Consensus 36 ~~~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~----~~~~~~~fD~v~ 109 (263)
T 2yqz_A 36 PKGEEPVFLELGVGTGRIALPLIARG--YRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARA----IPLPDESVHGVI 109 (263)
T ss_dssp CSSSCCEEEEETCTTSTTHHHHHTTT--CEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTS----CCSCTTCEEEEE
T ss_pred CCCCCCEEEEeCCcCCHHHHHHHHCC--CEEEEEECCHHHHHHHHHHhhccCCceEEEEccccc----CCCCCCCeeEEE
Confidence 45677899999999999999998874 599999999999999998863334689999999876 456677899999
Q ss_pred echhhcCCCcchHHHHHHHHHHhccCCeEEEEE
Q psy1107 156 LIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFR 188 (218)
Q Consensus 156 ~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~ 188 (218)
+..++++++ +...++.++.++|+|||.+++.
T Consensus 110 ~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 110 VVHLWHLVP--DWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp EESCGGGCT--THHHHHHHHHHHEEEEEEEEEE
T ss_pred ECCchhhcC--CHHHHHHHHHHHCCCCcEEEEE
Confidence 999999995 6889999999999999999987
No 33
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.72 E-value=1.7e-16 Score=123.62 Aligned_cols=140 Identities=15% Similarity=0.209 Sum_probs=99.0
Q ss_pred HhhHHHHHHH---hhhccCCCcccchHHHHHHhhhcCCCcEEEEecCCCch----hHHHHhhcCC----ccEEEEEeCCH
Q psy1107 45 KKYWDLFYKR---NETKFFKDRNWTVNEFHEFVNQDVGEGVLLEVGCGVGN----FIFPLLSWSK----ICYIHACDISP 113 (218)
Q Consensus 45 ~~~w~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~----~~~~~~~~~~----~~~v~~~D~s~ 113 (218)
.+.|..+... +.+.||++..... .+...+....++.+|||+|||+|. ++..+++..+ ..+|+|+|+|+
T Consensus 69 ~~e~~~l~~~lt~~~t~FfRd~~~f~-~l~~~llp~~~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~ 147 (274)
T 1af7_A 69 SAEWQAFINALTTNLTAFFREAHHFP-ILAEHARRRHGEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDT 147 (274)
T ss_dssp CTHHHHHHHHHCCCCCCTTTTTTHHH-HHHHHHHHSCSCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCH
T ss_pred HHHHHHHHHHHhhcCccccCChHHHH-HHHHHccCCCCCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCH
Confidence 4466655432 3456666544322 222222111346799999999998 4555555422 36999999999
Q ss_pred HHHHHHHhCCcc-----------------------cC---------CCceEEeccCCCcccccCCC-CCcccEEEechhh
Q psy1107 114 RAVNFFKLNPLY-----------------------DA---------SKMNVFPCDVTEDDILNQVP-HNSVDIATLIFVL 160 (218)
Q Consensus 114 ~~~~~~~~~~~~-----------------------~~---------~~i~~~~~d~~~~~~~~~~~-~~~~D~i~~~~~l 160 (218)
.+++.|++.... .+ .++.|.+.|+.+ .+++ .++||+|+|..++
T Consensus 148 ~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~~~v~~~lr~~V~F~~~dl~~----~~~~~~~~fDlI~crnvl 223 (274)
T 1af7_A 148 EVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGLVRVRQELANYVEFSSVNLLE----KQYNVPGPFDAIFCRNVM 223 (274)
T ss_dssp HHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSEEEECHHHHTTEEEEECCTTC----SSCCCCCCEEEEEECSSG
T ss_pred HHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCceeechhhcccCeEEecccCC----CCCCcCCCeeEEEECCch
Confidence 999999987310 00 258899999876 2333 4589999999999
Q ss_pred cCCCcchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 161 SAIHPNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 161 ~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
.|++++....++..+.+.|+|||+|++..
T Consensus 224 iyf~~~~~~~vl~~~~~~L~pgG~L~lg~ 252 (274)
T 1af7_A 224 IYFDKTTQEDILRRFVPLLKPDGLLFAGH 252 (274)
T ss_dssp GGSCHHHHHHHHHHHGGGEEEEEEEEECT
T ss_pred HhCCHHHHHHHHHHHHHHhCCCcEEEEEe
Confidence 99987778999999999999999999854
No 34
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.72 E-value=2.7e-17 Score=130.12 Aligned_cols=112 Identities=17% Similarity=0.245 Sum_probs=92.8
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcC-CccEEEEEeCCHHHHHHHHhCCccc---CCCceEEeccCCCccccc--CCCCCc
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWS-KICYIHACDISPRAVNFFKLNPLYD---ASKMNVFPCDVTEDDILN--QVPHNS 150 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~-~~~~v~~~D~s~~~~~~~~~~~~~~---~~~i~~~~~d~~~~~~~~--~~~~~~ 150 (218)
..++.+|||+|||+|..+..++... +..+++|+|+|+.+++.++++.... ..++.+.++|+.+..... .+..++
T Consensus 34 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 113 (299)
T 3g5t_A 34 DGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQK 113 (299)
T ss_dssp CSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSC
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCC
Confidence 3578899999999999999999754 6679999999999999999876544 468999999998733211 122378
Q ss_pred ccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 151 VDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 151 ~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
||+|++..+++|+ ++..++.++.++|+|||.|++..+.
T Consensus 114 fD~V~~~~~l~~~---~~~~~l~~~~~~LkpgG~l~i~~~~ 151 (299)
T 3g5t_A 114 IDMITAVECAHWF---DFEKFQRSAYANLRKDGTIAIWGYA 151 (299)
T ss_dssp EEEEEEESCGGGS---CHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred eeEEeHhhHHHHh---CHHHHHHHHHHhcCCCcEEEEEecC
Confidence 9999999999999 7889999999999999999995543
No 35
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.72 E-value=7.9e-17 Score=125.03 Aligned_cols=104 Identities=12% Similarity=0.223 Sum_probs=89.1
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEe
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATL 156 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~ 156 (218)
..++.+|||+|||+|.++..++..+ .+++++|+|+.+++.++++.. ++.++++|+.+ .++ .++||+|++
T Consensus 48 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~----~~~~~~~d~~~----~~~-~~~fD~v~~ 116 (263)
T 3pfg_A 48 SPKAASLLDVACGTGMHLRHLADSF--GTVEGLELSADMLAIARRRNP----DAVLHHGDMRD----FSL-GRRFSAVTC 116 (263)
T ss_dssp CTTCCEEEEETCTTSHHHHHHTTTS--SEEEEEESCHHHHHHHHHHCT----TSEEEECCTTT----CCC-SCCEEEEEE
T ss_pred CCCCCcEEEeCCcCCHHHHHHHHcC--CeEEEEECCHHHHHHHHhhCC----CCEEEECChHH----CCc-cCCcCEEEE
Confidence 3566899999999999999999876 489999999999999998743 78999999877 233 568999999
Q ss_pred ch-hhcCCC-cchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 157 IF-VLSAIH-PNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 157 ~~-~l~~~~-~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
.. +++|++ +++...++..+.++|+|||.|++..+.
T Consensus 117 ~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 153 (263)
T 3pfg_A 117 MFSSIGHLAGQAELDAALERFAAHVLPDGVVVVEPWW 153 (263)
T ss_dssp CTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECCCC
T ss_pred cCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEecc
Confidence 98 999996 367889999999999999999997543
No 36
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.72 E-value=2.7e-17 Score=127.10 Aligned_cols=108 Identities=19% Similarity=0.293 Sum_probs=92.9
Q ss_pred hhcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccCCCCCccc
Q psy1107 75 NQDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQVPHNSVD 152 (218)
Q Consensus 75 ~~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~~D 152 (218)
....++.+|||+|||+|.++..++..++. +++++|+|+.+++.++++....+ .++.+.+.|+.+ .+++.++||
T Consensus 42 ~~~~~~~~vLDiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~----~~~~~~~fD 116 (257)
T 3f4k_A 42 NELTDDAKIADIGCGTGGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDN----LPFQNEELD 116 (257)
T ss_dssp CCCCTTCEEEEETCTTSHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTS----CSSCTTCEE
T ss_pred hcCCCCCeEEEeCCCCCHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhh----CCCCCCCEE
Confidence 34567789999999999999999998764 99999999999999998765444 359999999966 456677999
Q ss_pred EEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEec
Q psy1107 153 IATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 153 ~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~ 190 (218)
+|++..+++|+ +...++..+.++|+|||.+++.+.
T Consensus 117 ~v~~~~~l~~~---~~~~~l~~~~~~L~pgG~l~~~~~ 151 (257)
T 3f4k_A 117 LIWSEGAIYNI---GFERGMNEWSKYLKKGGFIAVSEA 151 (257)
T ss_dssp EEEEESCSCCC---CHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred EEEecChHhhc---CHHHHHHHHHHHcCCCcEEEEEEe
Confidence 99999999998 477899999999999999999873
No 37
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.72 E-value=2.9e-17 Score=127.78 Aligned_cols=106 Identities=14% Similarity=0.229 Sum_probs=92.1
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccCCCCCcccEE
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQVPHNSVDIA 154 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~~D~i 154 (218)
..++.+|||+|||+|.++..++.. +..+++++|+|+.+++.++++....+ .++.+.+.|+.+ .+++.++||+|
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~----~~~~~~~fD~i 118 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDD----LPFRNEELDLI 118 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTS----CCCCTTCEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhh----CCCCCCCEEEE
Confidence 467889999999999999999987 55699999999999999998765443 469999999976 45567799999
Q ss_pred EechhhcCCCcchHHHHHHHHHHhccCCeEEEEEec
Q psy1107 155 TLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 155 ~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~ 190 (218)
++..+++++ +...+++.+.++|+|||.+++.+.
T Consensus 119 ~~~~~~~~~---~~~~~l~~~~~~LkpgG~l~~~~~ 151 (267)
T 3kkz_A 119 WSEGAIYNI---GFERGLNEWRKYLKKGGYLAVSEC 151 (267)
T ss_dssp EESSCGGGT---CHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred EEcCCceec---CHHHHHHHHHHHcCCCCEEEEEEe
Confidence 999999999 568899999999999999999874
No 38
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.72 E-value=1.2e-17 Score=129.66 Aligned_cols=146 Identities=19% Similarity=0.291 Sum_probs=101.5
Q ss_pred hHhhHHHHHHHhhhccCCC--cccchHHHHHHhh-hcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHH
Q psy1107 44 KKKYWDLFYKRNETKFFKD--RNWTVNEFHEFVN-QDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFK 120 (218)
Q Consensus 44 ~~~~w~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~ 120 (218)
...+|+.+|......+... ..+....+..++. ...++.+|||+|||+|.++..++..++ .+|+++|+|+.+++.++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~ 96 (265)
T 2i62_A 18 PRDYLEKYYSFGSRHCAENEILRHLLKNLFKIFCLGAVKGELLIDIGSGPTIYQLLSACESF-TEIIVSDYTDQNLWELQ 96 (265)
T ss_dssp HHHHHHHHHCCCSSCHHHHHHHHHHHHHHHHHHHSSSCCEEEEEEESCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHhCcCCcchhHHHHHHhhHHHHHHHhcccccCCCEEEEECCCccHHHHHHhhccc-CeEEEecCCHHHHHHHH
Confidence 4568888875543222110 0111112223322 234668999999999999999887764 48999999999999998
Q ss_pred hCCcccCC------------------------------Cc-eEEeccCCCcccccCCCCCcccEEEechhhcCCCcc--h
Q psy1107 121 LNPLYDAS------------------------------KM-NVFPCDVTEDDILNQVPHNSVDIATLIFVLSAIHPN--K 167 (218)
Q Consensus 121 ~~~~~~~~------------------------------~i-~~~~~d~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~--~ 167 (218)
++....+. ++ .+..+|+.+.........++||+|++..+++++++. +
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~ 176 (265)
T 2i62_A 97 KWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPA 176 (265)
T ss_dssp HHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHH
T ss_pred HHHhcCCccccchhhhhhhhcccccccchHHHHHHhhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHH
Confidence 76543211 16 889999887322112222789999999999966543 7
Q ss_pred HHHHHHHHHHhccCCeEEEEEec
Q psy1107 168 FSTVVKNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 168 ~~~~l~~~~~~Lk~gG~li~~~~ 190 (218)
...++.++.++|||||.|++.+.
T Consensus 177 ~~~~l~~~~~~LkpgG~li~~~~ 199 (265)
T 2i62_A 177 YRTALRNLGSLLKPGGFLVMVDA 199 (265)
T ss_dssp HHHHHHHHHTTEEEEEEEEEEEE
T ss_pred HHHHHHHHHhhCCCCcEEEEEec
Confidence 88999999999999999999773
No 39
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.72 E-value=5.3e-17 Score=125.26 Aligned_cols=103 Identities=18% Similarity=0.293 Sum_probs=91.2
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEec
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATLI 157 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~~ 157 (218)
.++.+|||+|||+|.++..++..++. +++++|+|+.+++.++++.. ..++.+..+|+.+ .+++.++||+|++.
T Consensus 43 ~~~~~vLD~GcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~--~~~~~~~~~d~~~----~~~~~~~fD~v~~~ 115 (253)
T 3g5l_A 43 FNQKTVLDLGCGFGWHCIYAAEHGAK-KVLGIDLSERMLTEAKRKTT--SPVVCYEQKAIED----IAIEPDAYNVVLSS 115 (253)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCS-EEEEEESCHHHHHHHHHHCC--CTTEEEEECCGGG----CCCCTTCEEEEEEE
T ss_pred cCCCEEEEECCCCCHHHHHHHHcCCC-EEEEEECCHHHHHHHHHhhc--cCCeEEEEcchhh----CCCCCCCeEEEEEc
Confidence 46789999999999999999988754 99999999999999998765 4689999999876 45667799999999
Q ss_pred hhhcCCCcchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 158 FVLSAIHPNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 158 ~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
.+++|+ .+...+++.+.++|+|||.+++..
T Consensus 116 ~~l~~~--~~~~~~l~~~~~~LkpgG~l~~~~ 145 (253)
T 3g5l_A 116 LALHYI--ASFDDICKKVYINLKSSGSFIFSV 145 (253)
T ss_dssp SCGGGC--SCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhhhh--hhHHHHHHHHHHHcCCCcEEEEEe
Confidence 999999 478899999999999999999975
No 40
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.71 E-value=4.3e-17 Score=124.91 Aligned_cols=110 Identities=16% Similarity=0.201 Sum_probs=94.0
Q ss_pred hhcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC-CCceEEeccCCCcccccCCCCCcccE
Q psy1107 75 NQDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA-SKMNVFPCDVTEDDILNQVPHNSVDI 153 (218)
Q Consensus 75 ~~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~~~~D~ 153 (218)
....++.+|||+|||+|.++..++..++ +++++|+|+.+++.++.+....+ .++.+...|+.. .+++.++||+
T Consensus 17 ~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~----~~~~~~~fD~ 90 (239)
T 1xxl_A 17 AECRAEHRVLDIGAGAGHTALAFSPYVQ--ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAES----LPFPDDSFDI 90 (239)
T ss_dssp HTCCTTCEEEEESCTTSHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTB----CCSCTTCEEE
T ss_pred hCcCCCCEEEEEccCcCHHHHHHHHhCC--EEEEEECCHHHHHHHHHHHHHcCCCCeEEEeccccc----CCCCCCcEEE
Confidence 4456788999999999999999998774 99999999999999988755433 578999999876 4566779999
Q ss_pred EEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCC
Q psy1107 154 ATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGL 192 (218)
Q Consensus 154 i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~ 192 (218)
|++..+++|++ +...++.++.++|+|||.+++.+...
T Consensus 91 v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~ 127 (239)
T 1xxl_A 91 ITCRYAAHHFS--DVRKAVREVARVLKQDGRFLLVDHYA 127 (239)
T ss_dssp EEEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEECB
T ss_pred EEECCchhhcc--CHHHHHHHHHHHcCCCcEEEEEEcCC
Confidence 99999999995 78899999999999999999987544
No 41
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.71 E-value=6.9e-17 Score=122.44 Aligned_cols=110 Identities=20% Similarity=0.271 Sum_probs=92.8
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEE
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIAT 155 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~ 155 (218)
...++.+|||+|||+|.++..++..++ +++++|+|+.+++.++++....+.++.+.++|+.+ .+++.++||+|+
T Consensus 35 ~~~~~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~----~~~~~~~~D~v~ 108 (227)
T 1ve3_A 35 YMKKRGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARK----LSFEDKTFDYVI 108 (227)
T ss_dssp SCCSCCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTS----CCSCTTCEEEEE
T ss_pred hcCCCCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhc----CCCCCCcEEEEE
Confidence 344578999999999999999988875 99999999999999998765545689999999876 345567899999
Q ss_pred echhhcCCCcchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 156 LIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 156 ~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
+..++++.+..+...++..+.++|+|||.+++.+..
T Consensus 109 ~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 109 FIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp EESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 998866665567889999999999999999998754
No 42
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.71 E-value=7.5e-17 Score=125.17 Aligned_cols=103 Identities=16% Similarity=0.295 Sum_probs=89.1
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEe
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATL 156 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~ 156 (218)
..++.+|||+|||+|.++..++. +..+++|+|+|+.+++.++.+. ++.+.+.|+.+ .++++++||+|++
T Consensus 32 ~~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~-----~~~~~~~d~~~----~~~~~~~fD~v~~ 100 (261)
T 3ege_A 32 LPKGSVIADIGAGTGGYSVALAN--QGLFVYAVEPSIVMRQQAVVHP-----QVEWFTGYAEN----LALPDKSVDGVIS 100 (261)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHT--TTCEEEEECSCHHHHHSSCCCT-----TEEEECCCTTS----CCSCTTCBSEEEE
T ss_pred CCCCCEEEEEcCcccHHHHHHHh--CCCEEEEEeCCHHHHHHHHhcc-----CCEEEECchhh----CCCCCCCEeEEEE
Confidence 46788999999999999999987 4479999999999998887653 79999999876 4566779999999
Q ss_pred chhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCCC
Q psy1107 157 IFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLH 193 (218)
Q Consensus 157 ~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~~ 193 (218)
..+++|+ .++..+++++.++|| ||.+++.++...
T Consensus 101 ~~~l~~~--~~~~~~l~~~~~~Lk-gG~~~~~~~~~~ 134 (261)
T 3ege_A 101 ILAIHHF--SHLEKSFQEMQRIIR-DGTIVLLTFDIR 134 (261)
T ss_dssp ESCGGGC--SSHHHHHHHHHHHBC-SSCEEEEEECGG
T ss_pred cchHhhc--cCHHHHHHHHHHHhC-CcEEEEEEcCCc
Confidence 9999999 488899999999999 998888876543
No 43
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.71 E-value=7.9e-17 Score=127.19 Aligned_cols=110 Identities=16% Similarity=0.022 Sum_probs=93.8
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccCCCCCcccE
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQVPHNSVDI 153 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~~D~ 153 (218)
...++.+|||+|||+|.++..++.... .+++++|+|+.+++.++++....+ .++.+.++|+.+ .++++++||+
T Consensus 79 ~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~----~~~~~~~fD~ 153 (297)
T 2o57_A 79 VLQRQAKGLDLGAGYGGAARFLVRKFG-VSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLE----IPCEDNSYDF 153 (297)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTS----CSSCTTCEEE
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCccc----CCCCCCCEeE
Confidence 446788999999999999999988742 599999999999999988754333 579999999877 4566779999
Q ss_pred EEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCC
Q psy1107 154 ATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGL 192 (218)
Q Consensus 154 i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~ 192 (218)
|++..+++|++ +...++.++.++|||||.|++.+...
T Consensus 154 v~~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~ 190 (297)
T 2o57_A 154 IWSQDAFLHSP--DKLKVFQECARVLKPRGVMAITDPMK 190 (297)
T ss_dssp EEEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred EEecchhhhcC--CHHHHHHHHHHHcCCCeEEEEEEecc
Confidence 99999999996 58899999999999999999987543
No 44
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.71 E-value=1.1e-16 Score=123.86 Aligned_cols=104 Identities=18% Similarity=0.144 Sum_probs=90.6
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEe
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATL 156 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~ 156 (218)
..++.+|||+|||+|.++..++...|..+++++|+|+.+++.++.+ ..++.+...|+.+ .+ +.++||+|++
T Consensus 31 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~----~~~~~~~~~d~~~----~~-~~~~fD~v~~ 101 (259)
T 2p35_A 31 LERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR----LPNTNFGKADLAT----WK-PAQKADLLYA 101 (259)
T ss_dssp CSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH----STTSEEEECCTTT----CC-CSSCEEEEEE
T ss_pred CCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh----CCCcEEEECChhh----cC-ccCCcCEEEE
Confidence 4567899999999999999999887767999999999999999876 2478999999876 23 4668999999
Q ss_pred chhhcCCCcchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 157 IFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 157 ~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
..+++|++ +...++.++.++|+|||.+++....
T Consensus 102 ~~~l~~~~--~~~~~l~~~~~~L~pgG~l~~~~~~ 134 (259)
T 2p35_A 102 NAVFQWVP--DHLAVLSQLMDQLESGGVLAVQMPD 134 (259)
T ss_dssp ESCGGGST--THHHHHHHHGGGEEEEEEEEEEEEC
T ss_pred eCchhhCC--CHHHHHHHHHHhcCCCeEEEEEeCC
Confidence 99999994 7889999999999999999998754
No 45
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.70 E-value=9.9e-17 Score=119.61 Aligned_cols=117 Identities=15% Similarity=0.162 Sum_probs=93.6
Q ss_pred HHHHhhhcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCC
Q psy1107 70 FHEFVNQDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHN 149 (218)
Q Consensus 70 ~~~~~~~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~ 149 (218)
+..++....++ +|||+|||+|.++..++..+ .+++++|+|+.+++.++++....+.++.+.+.|+.+ .+++.+
T Consensus 21 l~~~~~~~~~~-~vLdiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~----~~~~~~ 93 (202)
T 2kw5_A 21 LVSVANQIPQG-KILCLAEGEGRNACFLASLG--YEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLAD----FDIVAD 93 (202)
T ss_dssp HHHHHHHSCSS-EEEECCCSCTHHHHHHHTTT--CEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTT----BSCCTT
T ss_pred HHHHHHhCCCC-CEEEECCCCCHhHHHHHhCC--CeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhh----cCCCcC
Confidence 33343344556 99999999999999998764 599999999999999998765444578899999877 345667
Q ss_pred cccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCCCch
Q psy1107 150 SVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLHDM 195 (218)
Q Consensus 150 ~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~~~~ 195 (218)
+||+|++. +.|+++.+...++..+.++|+|||.+++..+.....
T Consensus 94 ~fD~v~~~--~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~ 137 (202)
T 2kw5_A 94 AWEGIVSI--FCHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPEQL 137 (202)
T ss_dssp TCSEEEEE--CCCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTTTG
T ss_pred CccEEEEE--hhcCCHHHHHHHHHHHHHhcCCCcEEEEEEeccccc
Confidence 89999985 345666788999999999999999999988765443
No 46
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.70 E-value=1.1e-16 Score=123.68 Aligned_cols=106 Identities=17% Similarity=0.130 Sum_probs=90.4
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccCCCCCcccE
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQVPHNSVDI 153 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~~D~ 153 (218)
...++.+|||+|||+|..+..++... ..+++++|+|+.+++.++++....+ .++.+.+.|+.+ .++ .++||+
T Consensus 33 ~~~~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~----~~~-~~~fD~ 106 (256)
T 1nkv_A 33 RMKPGTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAG----YVA-NEKCDV 106 (256)
T ss_dssp CCCTTCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTT----CCC-SSCEEE
T ss_pred CCCCCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHh----CCc-CCCCCE
Confidence 35677899999999999999998775 3599999999999999998765433 479999999877 233 568999
Q ss_pred EEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 154 ATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 154 i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
|++..+++|++ +...+++++.++|||||.+++.+
T Consensus 107 V~~~~~~~~~~--~~~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 107 AACVGATWIAG--GFAGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp EEEESCGGGTS--SSHHHHHHHTTSEEEEEEEEEEE
T ss_pred EEECCChHhcC--CHHHHHHHHHHHcCCCeEEEEec
Confidence 99999999985 67889999999999999999976
No 47
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.70 E-value=6.3e-17 Score=127.11 Aligned_cols=105 Identities=15% Similarity=0.279 Sum_probs=91.5
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEec
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATLI 157 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~~ 157 (218)
.++.+|||+|||+|.++..++..+ .+++++|+|+.+++.++.+....+.++.+.++|+.+. .. .++||+|++.
T Consensus 119 ~~~~~vLD~GcG~G~~~~~l~~~g--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~----~~-~~~fD~i~~~ 191 (286)
T 3m70_A 119 ISPCKVLDLGCGQGRNSLYLSLLG--YDVTSWDHNENSIAFLNETKEKENLNISTALYDINAA----NI-QENYDFIVST 191 (286)
T ss_dssp SCSCEEEEESCTTCHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGC----CC-CSCEEEEEEC
T ss_pred cCCCcEEEECCCCCHHHHHHHHCC--CeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccc----cc-cCCccEEEEc
Confidence 378899999999999999999875 5999999999999999988665555899999998762 23 5689999999
Q ss_pred hhhcCCCcchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 158 FVLSAIHPNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 158 ~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
.+++|+++.....++..+.++|+|||.+++..
T Consensus 192 ~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 192 VVFMFLNRERVPSIIKNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp SSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cchhhCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 99999988888899999999999999977755
No 48
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.70 E-value=5.7e-17 Score=132.52 Aligned_cols=113 Identities=19% Similarity=0.271 Sum_probs=94.8
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcC-CccEEEEEeCCHHHHHHHHhCCccc---------CCCceEEeccCCCcccc--c
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWS-KICYIHACDISPRAVNFFKLNPLYD---------ASKMNVFPCDVTEDDIL--N 144 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~-~~~~v~~~D~s~~~~~~~~~~~~~~---------~~~i~~~~~d~~~~~~~--~ 144 (218)
..++.+|||+|||+|.++..++... +..+|+++|+|+.+++.++++.... ..++.+++.|+.+.... .
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 4577899999999999999998774 6679999999999999999885422 26899999999873111 1
Q ss_pred CCCCCcccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 145 QVPHNSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 145 ~~~~~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
++++++||+|++..++++++ ++..++.++.++|||||.|++.+..
T Consensus 161 ~~~~~~fD~V~~~~~l~~~~--d~~~~l~~~~r~LkpgG~l~i~~~~ 205 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLST--NKLALFKEIHRVLRDGGELYFSDVY 205 (383)
T ss_dssp CCCTTCEEEEEEESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CCCCCCEEEEEEccchhcCC--CHHHHHHHHHHHcCCCCEEEEEEec
Confidence 66778999999999999985 6889999999999999999998744
No 49
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.70 E-value=8.3e-17 Score=126.37 Aligned_cols=109 Identities=19% Similarity=0.320 Sum_probs=91.6
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccCCCCCcccEEE
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQVPHNSVDIAT 155 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~~D~i~ 155 (218)
.++.+|||+|||+|.++..++..+ .+++++|+|+.+++.++++....+ .++.++++|+.+. ..++.++||+|+
T Consensus 67 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~~~~fD~v~ 141 (285)
T 4htf_A 67 PQKLRVLDAGGGEGQTAIKMAERG--HQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDV---ASHLETPVDLIL 141 (285)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGT---GGGCSSCEEEEE
T ss_pred CCCCEEEEeCCcchHHHHHHHHCC--CEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHh---hhhcCCCceEEE
Confidence 346799999999999999998874 599999999999999998765443 4789999998772 224567999999
Q ss_pred echhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCCC
Q psy1107 156 LIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLH 193 (218)
Q Consensus 156 ~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~~ 193 (218)
+..+++|++ +...++..+.++|+|||.+++..+...
T Consensus 142 ~~~~l~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~~~ 177 (285)
T 4htf_A 142 FHAVLEWVA--DPRSVLQTLWSVLRPGGVLSLMFYNAH 177 (285)
T ss_dssp EESCGGGCS--CHHHHHHHHHHTEEEEEEEEEEEEBHH
T ss_pred ECchhhccc--CHHHHHHHHHHHcCCCeEEEEEEeCCc
Confidence 999999995 678999999999999999999876543
No 50
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.69 E-value=6.7e-17 Score=127.31 Aligned_cols=113 Identities=15% Similarity=0.219 Sum_probs=89.4
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcc-----cCCCceEEeccCCCcccccCCCCCc
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLY-----DASKMNVFPCDVTEDDILNQVPHNS 150 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~-----~~~~i~~~~~d~~~~~~~~~~~~~~ 150 (218)
...++.+|||+|||+|.++..++..+ .+++|+|+|+.+++.++++... ...++.+...|+....- ..++.++
T Consensus 54 ~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~ 130 (293)
T 3thr_A 54 RQHGCHRVLDVACGTGVDSIMLVEEG--FSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDK-DVPAGDG 130 (293)
T ss_dssp HHTTCCEEEETTCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHH-HSCCTTC
T ss_pred cccCCCEEEEecCCCCHHHHHHHHCC--CeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCcc-ccccCCC
Confidence 34567899999999999999999876 4999999999999999875311 11467778888766210 0056679
Q ss_pred ccEEEec-hhhcCCCc-----chHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 151 VDIATLI-FVLSAIHP-----NKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 151 ~D~i~~~-~~l~~~~~-----~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
||+|++. .+++|+++ ++...+++.+.++|||||.+++....
T Consensus 131 fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 131 FDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp EEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred eEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 9999998 79999975 45899999999999999999987643
No 51
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.69 E-value=9.2e-17 Score=125.23 Aligned_cols=109 Identities=18% Similarity=0.242 Sum_probs=92.9
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccCCCCCcccEE
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQVPHNSVDIA 154 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~~D~i 154 (218)
..++.+|||+|||+|.++..++... ..+++++|+|+.+++.++.+....+ .++.+..+|+.+ .++++++||+|
T Consensus 59 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~----~~~~~~~fD~v 133 (273)
T 3bus_A 59 VRSGDRVLDVGCGIGKPAVRLATAR-DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMD----LPFEDASFDAV 133 (273)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHS-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTS----CCSCTTCEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECcccc----CCCCCCCccEE
Confidence 4577899999999999999998765 3699999999999999988755433 469999999877 45667799999
Q ss_pred EechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCC
Q psy1107 155 TLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGL 192 (218)
Q Consensus 155 ~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~ 192 (218)
++..+++|++ +...++.++.++|+|||.+++.++..
T Consensus 134 ~~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~~~~ 169 (273)
T 3bus_A 134 WALESLHHMP--DRGRALREMARVLRPGGTVAIADFVL 169 (273)
T ss_dssp EEESCTTTSS--CHHHHHHHHHTTEEEEEEEEEEEEEE
T ss_pred EEechhhhCC--CHHHHHHHHHHHcCCCeEEEEEEeec
Confidence 9999999995 67899999999999999999987543
No 52
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.69 E-value=7.6e-17 Score=123.37 Aligned_cols=108 Identities=14% Similarity=0.099 Sum_probs=88.0
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEe
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATL 156 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~ 156 (218)
..++.+|||||||+|..+..+++..+ .+++++|+|+.+++.|+++....+.++.++..|+... ...+++++||.|++
T Consensus 58 ~~~G~rVLdiG~G~G~~~~~~~~~~~-~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~--~~~~~~~~FD~i~~ 134 (236)
T 3orh_A 58 SSKGGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDV--APTLPDGHFDGILY 134 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHTTSCE-EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHH--GGGSCTTCEEEEEE
T ss_pred ccCCCeEEEECCCccHHHHHHHHhCC-cEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhh--cccccccCCceEEE
Confidence 46788999999999999999988766 4899999999999999998776667788888876542 24567778999975
Q ss_pred -----chhhcCCCcchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 157 -----IFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 157 -----~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
...+.|. .+...+++++.++|||||.|++..
T Consensus 135 D~~~~~~~~~~~--~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 135 DTYPLSEETWHT--HQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp CCCCCBGGGTTT--HHHHHHHHTHHHHEEEEEEEEECC
T ss_pred eeeecccchhhh--cchhhhhhhhhheeCCCCEEEEEe
Confidence 3344455 478899999999999999998754
No 53
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.69 E-value=9.6e-17 Score=123.70 Aligned_cols=104 Identities=17% Similarity=0.270 Sum_probs=86.5
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEec
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATLI 157 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~~ 157 (218)
.++.+|||+|||+|.++..++..+ .+++++|+|+.+++.++++....+.++.+.++|+.+ .+.+ ++||+|++.
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~----~~~~-~~fD~v~~~ 112 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAERG--YEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLE----IAFK-NEFDAVTMF 112 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGG----CCCC-SCEEEEEEC
T ss_pred cCCCEEEEeCCCCCHHHHHHHHCC--CeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhh----cccC-CCccEEEEc
Confidence 456899999999999999998875 599999999999999998765555578999999876 2333 479999986
Q ss_pred h-hhcCCCcchHHHHHHHHHHhccCCeEEEEE
Q psy1107 158 F-VLSAIHPNKFSTVVKNLFIMLKSGGIILFR 188 (218)
Q Consensus 158 ~-~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~ 188 (218)
. .++++++++...++..+.++|+|||.+++.
T Consensus 113 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~ 144 (252)
T 1wzn_A 113 FSTIMYFDEEDLRKLFSKVAEALKPGGVFITD 144 (252)
T ss_dssp SSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCchhcCCHHHHHHHHHHHHHHcCCCeEEEEe
Confidence 4 556666677889999999999999998874
No 54
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.69 E-value=5.5e-17 Score=128.44 Aligned_cols=114 Identities=19% Similarity=0.202 Sum_probs=86.8
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCC-------CceEEeccCCCcc----cccCC
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDAS-------KMNVFPCDVTEDD----ILNQV 146 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~-------~i~~~~~d~~~~~----~~~~~ 146 (218)
.++.+|||||||+|..+..++..+ ..+|+|+|+|+.+++.|+.+....+. ++.|.+.|+.... +...+
T Consensus 47 ~~~~~VLDlGCG~G~~l~~~~~~~-~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~ 125 (302)
T 2vdw_A 47 SNKRKVLAIDFGNGADLEKYFYGE-IALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVF 125 (302)
T ss_dssp CSCCEEEETTCTTTTTHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTC
T ss_pred CCCCeEEEEecCCcHhHHHHHhcC-CCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccc
Confidence 346899999999998777666543 35899999999999999987543322 2567777774432 12235
Q ss_pred CCCcccEEEechhhcCC-CcchHHHHHHHHHHhccCCeEEEEEecCC
Q psy1107 147 PHNSVDIATLIFVLSAI-HPNKFSTVVKNLFIMLKSGGIILFRDYGL 192 (218)
Q Consensus 147 ~~~~~D~i~~~~~l~~~-~~~~~~~~l~~~~~~Lk~gG~li~~~~~~ 192 (218)
+.++||+|+|.++++++ .+++...+++.+.++|||||.|++.....
T Consensus 126 ~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~ 172 (302)
T 2vdw_A 126 YFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMDG 172 (302)
T ss_dssp CSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred cCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 66799999999999875 33467899999999999999999877543
No 55
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.69 E-value=1.4e-16 Score=126.09 Aligned_cols=112 Identities=15% Similarity=0.124 Sum_probs=94.3
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccCCCCCcccE
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQVPHNSVDI 153 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~~D~ 153 (218)
...++.+|||+|||+|.++..++...+ .+++++|+|+.+++.++++....+ .++.+..+|+.+ . .++||+
T Consensus 69 ~~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~----~---~~~fD~ 140 (302)
T 3hem_A 69 NLEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEE----F---DEPVDR 140 (302)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGG----C---CCCCSE
T ss_pred CCCCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHH----c---CCCccE
Confidence 346778999999999999999998754 699999999999999998865443 479999999865 1 568999
Q ss_pred EEechhhcCCC-------cchHHHHHHHHHHhccCCeEEEEEecCCCch
Q psy1107 154 ATLIFVLSAIH-------PNKFSTVVKNLFIMLKSGGIILFRDYGLHDM 195 (218)
Q Consensus 154 i~~~~~l~~~~-------~~~~~~~l~~~~~~Lk~gG~li~~~~~~~~~ 195 (218)
|++..+++|++ .++...++..+.++|||||.+++.++...+.
T Consensus 141 v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~ 189 (302)
T 3hem_A 141 IVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPDK 189 (302)
T ss_dssp EEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCCH
T ss_pred EEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccCc
Confidence 99999999994 3567899999999999999999988665443
No 56
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.69 E-value=1e-16 Score=117.96 Aligned_cols=113 Identities=14% Similarity=0.099 Sum_probs=84.3
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC-CCceEEeccCCCcccccCCCCCcccEE
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA-SKMNVFPCDVTEDDILNQVPHNSVDIA 154 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~~~~D~i 154 (218)
...++.+|||+|||+|.++..++.. ..+|+++|+|+.+++.|+++....+ .++.+++.+.... ..+..++||+|
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~la~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l---~~~~~~~fD~v 93 (185)
T 3mti_A 19 VLDDESIVVDATMGNGNDTAFLAGL--SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENL---DHYVREPIRAA 93 (185)
T ss_dssp TCCTTCEEEESCCTTSHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGG---GGTCCSCEEEE
T ss_pred hCCCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHH---HhhccCCcCEE
Confidence 3457889999999999999999987 3699999999999999998866544 5788888665441 22345689999
Q ss_pred Eech-hhcCC------CcchHHHHHHHHHHhccCCeEEEEEecCCC
Q psy1107 155 TLIF-VLSAI------HPNKFSTVVKNLFIMLKSGGIILFRDYGLH 193 (218)
Q Consensus 155 ~~~~-~l~~~------~~~~~~~~l~~~~~~Lk~gG~li~~~~~~~ 193 (218)
++.. .+.+. .++....++..+.++|||||.+++..+...
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 139 (185)
T 3mti_A 94 IFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGH 139 (185)
T ss_dssp EEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC---
T ss_pred EEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCC
Confidence 8763 22210 224566888999999999999999887543
No 57
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.68 E-value=9.5e-17 Score=127.33 Aligned_cols=115 Identities=15% Similarity=0.068 Sum_probs=94.6
Q ss_pred hhcCCCcEEEEecCCCchhHHHHh-hcCCccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccCCCCCcc
Q psy1107 75 NQDVGEGVLLEVGCGVGNFIFPLL-SWSKICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQVPHNSV 151 (218)
Q Consensus 75 ~~~~~~~~vLDiGcG~G~~~~~~~-~~~~~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~~ 151 (218)
....++.+|||+|||+|..+..++ ...+..+++++|+|+.+++.++.+....+ .++.++++|+.+ .+++ ++|
T Consensus 114 ~~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~----~~~~-~~f 188 (305)
T 3ocj_A 114 RHLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWK----LDTR-EGY 188 (305)
T ss_dssp HHCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGG----CCCC-SCE
T ss_pred hhCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhc----CCcc-CCe
Confidence 335678899999999999999986 45677899999999999999998865544 348999999877 3445 689
Q ss_pred cEEEechhhcCCC-cchHHHHHHHHHHhccCCeEEEEEecCCCc
Q psy1107 152 DIATLIFVLSAIH-PNKFSTVVKNLFIMLKSGGIILFRDYGLHD 194 (218)
Q Consensus 152 D~i~~~~~l~~~~-~~~~~~~l~~~~~~Lk~gG~li~~~~~~~~ 194 (218)
|+|++..+++|++ +.....++..+.++|+|||.+++.++....
T Consensus 189 D~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 232 (305)
T 3ocj_A 189 DLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPP 232 (305)
T ss_dssp EEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCT
T ss_pred EEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCC
Confidence 9999999999986 344456899999999999999998866543
No 58
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.68 E-value=2e-16 Score=122.21 Aligned_cols=106 Identities=9% Similarity=0.058 Sum_probs=83.2
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCccc-ccCCCCCcccEE
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDI-LNQVPHNSVDIA 154 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-~~~~~~~~~D~i 154 (218)
...++.+|||+|||+|.++..++..+ .+|+++|+|+.+++.++++.... ++..++.+... ......++||+|
T Consensus 42 ~l~~g~~VLDlGcGtG~~a~~La~~g--~~V~gvD~S~~ml~~Ar~~~~~~-----~v~~~~~~~~~~~~~~~~~~fD~V 114 (261)
T 3iv6_A 42 NIVPGSTVAVIGASTRFLIEKALERG--ASVTVFDFSQRMCDDLAEALADR-----CVTIDLLDITAEIPKELAGHFDFV 114 (261)
T ss_dssp TCCTTCEEEEECTTCHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHTSSS-----CCEEEECCTTSCCCGGGTTCCSEE
T ss_pred CCCCcCEEEEEeCcchHHHHHHHhcC--CEEEEEECCHHHHHHHHHHHHhc-----cceeeeeecccccccccCCCccEE
Confidence 45677899999999999999999876 59999999999999999886543 23333333111 001113589999
Q ss_pred EechhhcCCCcchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 155 TLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 155 ~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
++..+++|+++++...++..+.++| |||.+++..
T Consensus 115 v~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~ 148 (261)
T 3iv6_A 115 LNDRLINRFTTEEARRACLGMLSLV-GSGTVRASV 148 (261)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEE
T ss_pred EEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEe
Confidence 9999999998778889999999999 999999864
No 59
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.68 E-value=2.3e-16 Score=124.33 Aligned_cols=111 Identities=15% Similarity=0.177 Sum_probs=91.8
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccCC-CCCcccE
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQV-PHNSVDI 153 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~-~~~~~D~ 153 (218)
..++.+|||+|||+|.++..++..+ ..+++++|+|+.+++.++.+....+ .++.+.++|+.+ .++ +.++||+
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~----~~~~~~~~fD~ 136 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERAG-IGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYG----RHMDLGKEFDV 136 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHHT-CSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTT----SCCCCSSCEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccc----cccCCCCCcCE
Confidence 4678899999999999999888764 3599999999999999998755433 368999999877 334 4668999
Q ss_pred EEechhhcC--CCcchHHHHHHHHHHhccCCeEEEEEecCC
Q psy1107 154 ATLIFVLSA--IHPNKFSTVVKNLFIMLKSGGIILFRDYGL 192 (218)
Q Consensus 154 i~~~~~l~~--~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~ 192 (218)
|++..++++ .+..+...++..+.++|+|||.+++.....
T Consensus 137 v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 177 (298)
T 1ri5_A 137 ISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSR 177 (298)
T ss_dssp EEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred EEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 999999887 445678899999999999999999987543
No 60
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.68 E-value=8e-17 Score=123.16 Aligned_cols=112 Identities=15% Similarity=0.167 Sum_probs=88.2
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEe
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATL 156 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~ 156 (218)
..++.+|||+|||+|.++..++...+ .+++++|+|+.+++.|+++....+.++.++++|+.+. ..++++++||+|++
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~--~~~~~~~~fD~V~~ 134 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDV--APTLPDGHFDGILY 134 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTSCE-EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHH--GGGSCTTCEEEEEE
T ss_pred CCCCCeEEEEeccCCHHHHHHHhcCC-CeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHh--hcccCCCceEEEEE
Confidence 35678999999999999999976554 4899999999999999998765556789999988762 12567789999998
Q ss_pred -chhh--cCCCcchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 157 -IFVL--SAIHPNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 157 -~~~l--~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
.+.+ +.........++.++.++|||||.|++.++.
T Consensus 135 d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 135 DTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp CCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHH
T ss_pred CCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEecC
Confidence 4432 2222345667899999999999999987643
No 61
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.68 E-value=2.9e-16 Score=127.51 Aligned_cols=112 Identities=10% Similarity=0.196 Sum_probs=95.4
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccCCCCCcccEEE
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQVPHNSVDIAT 155 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~~D~i~ 155 (218)
.+..+|||||||+|.++..+++.+|..+++++|+ +.+++.++++....+ .++.+..+|+.+.. .+++ ++||+|+
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~~~p-~~~D~v~ 253 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRD--VPFP-TGFDAVW 253 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSS--CCCC-CCCSEEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccC--CCCC-CCcCEEE
Confidence 4668999999999999999999999899999999 999999998755433 47999999997731 0345 5899999
Q ss_pred echhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCCC
Q psy1107 156 LIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLH 193 (218)
Q Consensus 156 ~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~~ 193 (218)
+..+++++++++...+++++++.|+|||.|++.+....
T Consensus 254 ~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 291 (363)
T 3dp7_A 254 MSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWD 291 (363)
T ss_dssp EESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTT
T ss_pred EechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccC
Confidence 99999999877778999999999999999999885443
No 62
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.68 E-value=1.3e-16 Score=126.89 Aligned_cols=110 Identities=12% Similarity=0.099 Sum_probs=93.8
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccCCCCCcccEE
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQVPHNSVDIA 154 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~~D~i 154 (218)
..++.+|||+|||+|.++..++... ..+++++|+++.+++.++++....+ .++.+..+|+.+ .+++.++||+|
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~----~~~~~~~fD~V 189 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRF-GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLD----TPFDKGAVTAS 189 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTS----CCCCTTCEEEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhc----CCCCCCCEeEE
Confidence 4577899999999999999998873 3599999999999999998765444 479999999977 45667799999
Q ss_pred EechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCCCc
Q psy1107 155 TLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLHD 194 (218)
Q Consensus 155 ~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~~~ 194 (218)
++..+++|++ ...++..+.++|||||.+++.+....+
T Consensus 190 ~~~~~l~~~~---~~~~l~~~~~~LkpgG~l~~~~~~~~~ 226 (312)
T 3vc1_A 190 WNNESTMYVD---LHDLFSEHSRFLKVGGRYVTITGCWNP 226 (312)
T ss_dssp EEESCGGGSC---HHHHHHHHHHHEEEEEEEEEEEEEECT
T ss_pred EECCchhhCC---HHHHHHHHHHHcCCCcEEEEEEccccc
Confidence 9999999993 889999999999999999998754443
No 63
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.68 E-value=2.3e-16 Score=123.93 Aligned_cols=110 Identities=15% Similarity=0.165 Sum_probs=92.3
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccCCCCCcccEE
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQVPHNSVDIA 154 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~~D~i 154 (218)
..++.+|||+|||+|.++..++...+ .+++++|+|+.+++.++++....+ .++.+..+|+.+ ++ ++||+|
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~------~~-~~fD~v 133 (287)
T 1kpg_A 62 LQPGMTLLDVGCGWGATMMRAVEKYD-VNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQ------FD-EPVDRI 133 (287)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGG------CC-CCCSEE
T ss_pred CCCcCEEEEECCcccHHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhh------CC-CCeeEE
Confidence 45778999999999999999985543 499999999999999998754333 478899998854 22 689999
Q ss_pred EechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCCCc
Q psy1107 155 TLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLHD 194 (218)
Q Consensus 155 ~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~~~ 194 (218)
++..+++|+++.+...++.++.++|||||.+++.+.....
T Consensus 134 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 173 (287)
T 1kpg_A 134 VSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGLH 173 (287)
T ss_dssp EEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEECC
T ss_pred EEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecCCC
Confidence 9999999998778899999999999999999998765443
No 64
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.68 E-value=7.5e-16 Score=117.90 Aligned_cols=106 Identities=19% Similarity=0.330 Sum_probs=90.5
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEE
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIAT 155 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~ 155 (218)
...++.+|||+|||+|.++..++..+. .+++++|+|+.+++.++.+... .++.+.+.|+.. .+++.++||+|+
T Consensus 40 ~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~--~~~~~~~~d~~~----~~~~~~~fD~v~ 112 (243)
T 3bkw_A 40 PEVGGLRIVDLGCGFGWFCRWAHEHGA-SYVLGLDLSEKMLARARAAGPD--TGITYERADLDK----LHLPQDSFDLAY 112 (243)
T ss_dssp CCCTTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHTSCS--SSEEEEECCGGG----CCCCTTCEEEEE
T ss_pred cccCCCEEEEEcCcCCHHHHHHHHCCC-CeEEEEcCCHHHHHHHHHhccc--CCceEEEcChhh----ccCCCCCceEEE
Confidence 345678999999999999999988753 2899999999999999988653 368899998876 345667899999
Q ss_pred echhhcCCCcchHHHHHHHHHHhccCCeEEEEEec
Q psy1107 156 LIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 156 ~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~ 190 (218)
+..+++|++ +...+++.+.++|+|||.+++...
T Consensus 113 ~~~~l~~~~--~~~~~l~~~~~~L~pgG~l~~~~~ 145 (243)
T 3bkw_A 113 SSLALHYVE--DVARLFRTVHQALSPGGHFVFSTE 145 (243)
T ss_dssp EESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred Eeccccccc--hHHHHHHHHHHhcCcCcEEEEEeC
Confidence 999999995 788999999999999999999763
No 65
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.68 E-value=3.5e-16 Score=119.85 Aligned_cols=106 Identities=19% Similarity=0.187 Sum_probs=89.6
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEec
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATLI 157 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~~ 157 (218)
.++.+|||+|||+|.++..++..+ .+++++|+|+.+++.++.+....+.++.+.++|+.+ .+++ ++||+|++.
T Consensus 36 ~~~~~vLdiG~G~G~~~~~l~~~~--~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~----~~~~-~~fD~v~~~ 108 (246)
T 1y8c_A 36 LVFDDYLDLACGTGNLTENLCPKF--KNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISN----LNIN-RKFDLITCC 108 (246)
T ss_dssp CCTTEEEEETCTTSTTHHHHGGGS--SEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGG----CCCS-CCEEEEEEC
T ss_pred CCCCeEEEeCCCCCHHHHHHHHCC--CcEEEEECCHHHHHHHHHHHhhcCCCeEEEeccccc----CCcc-CCceEEEEc
Confidence 367899999999999999998875 489999999999999998765444478999998876 3344 689999999
Q ss_pred h-hhcCCC-cchHHHHHHHHHHhccCCeEEEEEec
Q psy1107 158 F-VLSAIH-PNKFSTVVKNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 158 ~-~l~~~~-~~~~~~~l~~~~~~Lk~gG~li~~~~ 190 (218)
. +++|++ +.+...++..+.++|+|||.+++...
T Consensus 109 ~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (246)
T 1y8c_A 109 LDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDIN 143 (246)
T ss_dssp TTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred CccccccCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 8 999995 36788999999999999999998543
No 66
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.68 E-value=3e-16 Score=119.79 Aligned_cols=104 Identities=13% Similarity=0.251 Sum_probs=87.7
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEec
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATLI 157 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~~ 157 (218)
.++.+|||+|||+|.++..++..++ +++++|+|+.+++.++++. .++.+...|+.+ .+. .++||+|+|.
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~~~----~~~~~~~~d~~~----~~~-~~~~D~v~~~ 107 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFG--DTAGLELSEDMLTHARKRL----PDATLHQGDMRD----FRL-GRKFSAVVSM 107 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHS--EEEEEESCHHHHHHHHHHC----TTCEEEECCTTT----CCC-SSCEEEEEEC
T ss_pred CCCCeEEEecccCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhC----CCCEEEECCHHH----ccc-CCCCcEEEEc
Confidence 5678999999999999999998875 8999999999999998764 368899999876 233 4589999964
Q ss_pred h-hhcCCC-cchHHHHHHHHHHhccCCeEEEEEecCC
Q psy1107 158 F-VLSAIH-PNKFSTVVKNLFIMLKSGGIILFRDYGL 192 (218)
Q Consensus 158 ~-~l~~~~-~~~~~~~l~~~~~~Lk~gG~li~~~~~~ 192 (218)
. +++|++ +++...+++.+.++|+|||.+++.++..
T Consensus 108 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (239)
T 3bxo_A 108 FSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPWWF 144 (239)
T ss_dssp TTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCCCC
T ss_pred CchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEeccC
Confidence 4 888885 3678899999999999999999976543
No 67
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.68 E-value=4.4e-16 Score=121.63 Aligned_cols=114 Identities=18% Similarity=0.190 Sum_probs=93.6
Q ss_pred CCCcEEEEecCCC---chhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccc-------cCCC
Q psy1107 78 VGEGVLLEVGCGV---GNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDIL-------NQVP 147 (218)
Q Consensus 78 ~~~~~vLDiGcG~---G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~-------~~~~ 147 (218)
.+..+|||||||+ |..+..+....|..+|+++|+|+.+++.++++... ..++.++.+|+.+.... ..++
T Consensus 76 ~~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~~d 154 (274)
T 2qe6_A 76 AGISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK-DPNTAVFTADVRDPEYILNHPDVRRMID 154 (274)
T ss_dssp TCCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT-CTTEEEEECCTTCHHHHHHSHHHHHHCC
T ss_pred cCCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC-CCCeEEEEeeCCCchhhhccchhhccCC
Confidence 3457999999999 98877666667778999999999999999987532 35799999999764211 1233
Q ss_pred CCcccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCC
Q psy1107 148 HNSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGL 192 (218)
Q Consensus 148 ~~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~ 192 (218)
-.+||+|++..+++|+++++...+++++.++|+|||.|++.++..
T Consensus 155 ~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 155 FSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp TTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred CCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 347999999999999986678999999999999999999988765
No 68
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.68 E-value=2.3e-16 Score=114.46 Aligned_cols=103 Identities=21% Similarity=0.354 Sum_probs=88.5
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEe
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATL 156 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~ 156 (218)
..++.+|||+|||+|.++..++..+ .+++++|+++.+++.++++ ..++.+...| .+++.++||+|++
T Consensus 15 ~~~~~~vLDiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~----~~~v~~~~~d-------~~~~~~~~D~v~~ 81 (170)
T 3i9f_A 15 EGKKGVIVDYGCGNGFYCKYLLEFA--TKLYCIDINVIALKEVKEK----FDSVITLSDP-------KEIPDNSVDFILF 81 (170)
T ss_dssp SSCCEEEEEETCTTCTTHHHHHTTE--EEEEEECSCHHHHHHHHHH----CTTSEEESSG-------GGSCTTCEEEEEE
T ss_pred cCCCCeEEEECCCCCHHHHHHHhhc--CeEEEEeCCHHHHHHHHHh----CCCcEEEeCC-------CCCCCCceEEEEE
Confidence 4577899999999999999999877 3999999999999999987 3478888887 2345678999999
Q ss_pred chhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCCCc
Q psy1107 157 IFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLHD 194 (218)
Q Consensus 157 ~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~~~ 194 (218)
..+++|++ +...+++++.++|+|||.+++.++....
T Consensus 82 ~~~l~~~~--~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 117 (170)
T 3i9f_A 82 ANSFHDMD--DKQHVISEVKRILKDDGRVIIIDWRKEN 117 (170)
T ss_dssp ESCSTTCS--CHHHHHHHHHHHEEEEEEEEEEEECSSC
T ss_pred ccchhccc--CHHHHHHHHHHhcCCCCEEEEEEcCccc
Confidence 99999994 7889999999999999999998866543
No 69
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.67 E-value=4.7e-16 Score=121.73 Aligned_cols=104 Identities=16% Similarity=0.200 Sum_probs=89.2
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEe
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATL 156 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~ 156 (218)
..++.+|||+|||+|.++..++. +..+++++|+|+.+++.++.+. .++.+..+|+.. .++ .++||+|++
T Consensus 55 ~~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~----~~~~~~~~d~~~----~~~-~~~fD~v~~ 123 (279)
T 3ccf_A 55 PQPGEFILDLGCGTGQLTEKIAQ--SGAEVLGTDNAATMIEKARQNY----PHLHFDVADARN----FRV-DKPLDAVFS 123 (279)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHH--TTCEEEEEESCHHHHHHHHHHC----TTSCEEECCTTT----CCC-SSCEEEEEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHhhC----CCCEEEECChhh----CCc-CCCcCEEEE
Confidence 45678999999999999999988 4579999999999999998764 478899999876 233 458999999
Q ss_pred chhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCCC
Q psy1107 157 IFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLH 193 (218)
Q Consensus 157 ~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~~ 193 (218)
..++++++ ++..++.++.++|+|||.+++......
T Consensus 124 ~~~l~~~~--d~~~~l~~~~~~LkpgG~l~~~~~~~~ 158 (279)
T 3ccf_A 124 NAMLHWVK--EPEAAIASIHQALKSGGRFVAEFGGKG 158 (279)
T ss_dssp ESCGGGCS--CHHHHHHHHHHHEEEEEEEEEEEECTT
T ss_pred cchhhhCc--CHHHHHHHHHHhcCCCcEEEEEecCCc
Confidence 99999995 788999999999999999999776543
No 70
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.67 E-value=4.1e-16 Score=117.05 Aligned_cols=102 Identities=18% Similarity=0.169 Sum_probs=87.6
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCcc-EEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEe
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKIC-YIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATL 156 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~-~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~ 156 (218)
.++.+|||+|||+|.++..+ .. +++++|+|+.+++.++++. .++.+.+.|+.+ .+++.++||+|++
T Consensus 35 ~~~~~vLdiG~G~G~~~~~l-----~~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~d~~~----~~~~~~~fD~v~~ 101 (211)
T 2gs9_A 35 PPGESLLEVGAGTGYWLRRL-----PYPQKVGVEPSEAMLAVGRRRA----PEATWVRAWGEA----LPFPGESFDVVLL 101 (211)
T ss_dssp CCCSEEEEETCTTCHHHHHC-----CCSEEEEECCCHHHHHHHHHHC----TTSEEECCCTTS----CCSCSSCEEEEEE
T ss_pred CCCCeEEEECCCCCHhHHhC-----CCCeEEEEeCCHHHHHHHHHhC----CCcEEEEccccc----CCCCCCcEEEEEE
Confidence 37789999999999998777 24 8999999999999999875 468888888876 4566778999999
Q ss_pred chhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCCCc
Q psy1107 157 IFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLHD 194 (218)
Q Consensus 157 ~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~~~ 194 (218)
..+++|++ +...++.++.++|+|||.+++.......
T Consensus 102 ~~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~~~~~~ 137 (211)
T 2gs9_A 102 FTTLEFVE--DVERVLLEARRVLRPGGALVVGVLEALS 137 (211)
T ss_dssp ESCTTTCS--CHHHHHHHHHHHEEEEEEEEEEEECTTS
T ss_pred cChhhhcC--CHHHHHHHHHHHcCCCCEEEEEecCCcC
Confidence 99999995 7889999999999999999998866543
No 71
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.66 E-value=3e-16 Score=124.10 Aligned_cols=111 Identities=14% Similarity=0.216 Sum_probs=92.3
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC----CCceEEeccCCCcccccCCCCCcccE
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA----SKMNVFPCDVTEDDILNQVPHNSVDI 153 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~----~~i~~~~~d~~~~~~~~~~~~~~~D~ 153 (218)
.++.+|||+|||+|.++..++..+ .+|+++|+|+.+++.++++....+ .++.++++|+.+ .++ .++||+
T Consensus 81 ~~~~~vLDlGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~----~~~-~~~fD~ 153 (299)
T 3g2m_A 81 PVSGPVLELAAGMGRLTFPFLDLG--WEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSA----FAL-DKRFGT 153 (299)
T ss_dssp CCCSCEEEETCTTTTTHHHHHTTT--CCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTB----CCC-SCCEEE
T ss_pred CCCCcEEEEeccCCHHHHHHHHcC--CeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhc----CCc-CCCcCE
Confidence 344599999999999999999875 589999999999999998866544 579999999987 333 468998
Q ss_pred EEec-hhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCCCch
Q psy1107 154 ATLI-FVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLHDM 195 (218)
Q Consensus 154 i~~~-~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~~~~ 195 (218)
|++. .+++++++++...++..+.++|+|||.|++..+.....
T Consensus 154 v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~ 196 (299)
T 3g2m_A 154 VVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSEAA 196 (299)
T ss_dssp EEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCHHH
T ss_pred EEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCccc
Confidence 8865 56777776778999999999999999999988665543
No 72
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.66 E-value=1.2e-15 Score=114.00 Aligned_cols=108 Identities=15% Similarity=0.103 Sum_probs=88.5
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC-CCceEEeccCCCcccccCCCCCcccEE
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA-SKMNVFPCDVTEDDILNQVPHNSVDIA 154 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~~~~D~i 154 (218)
...++.+|||+|||+|.++..++..+|..+++++|+|+.+++.++++....+ .++.+...|+.+. ....++||+|
T Consensus 37 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~----~~~~~~~D~i 112 (204)
T 3e05_A 37 RLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEG----LDDLPDPDRV 112 (204)
T ss_dssp TCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTT----CTTSCCCSEE
T ss_pred CCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhh----hhcCCCCCEE
Confidence 4567789999999999999999998887899999999999999998865444 5789999988652 1122579999
Q ss_pred EechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCC
Q psy1107 155 TLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGL 192 (218)
Q Consensus 155 ~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~ 192 (218)
++..+++ +...+++.+.++|+|||.+++.....
T Consensus 113 ~~~~~~~-----~~~~~l~~~~~~LkpgG~l~~~~~~~ 145 (204)
T 3e05_A 113 FIGGSGG-----MLEEIIDAVDRRLKSEGVIVLNAVTL 145 (204)
T ss_dssp EESCCTT-----CHHHHHHHHHHHCCTTCEEEEEECBH
T ss_pred EECCCCc-----CHHHHHHHHHHhcCCCeEEEEEeccc
Confidence 9876543 57789999999999999999986543
No 73
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.66 E-value=5.2e-16 Score=123.67 Aligned_cols=110 Identities=13% Similarity=0.075 Sum_probs=93.1
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccCCCCCcccEE
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQVPHNSVDIA 154 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~~D~i 154 (218)
..++.+|||+|||+|.++..++... ..+++++|+|+.+++.++++....+ .++.+...|+.+ . + ++||+|
T Consensus 88 ~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~----~--~-~~fD~v 159 (318)
T 2fk8_A 88 LKPGMTLLDIGCGWGTTMRRAVERF-DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWED----F--A-EPVDRI 159 (318)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGG----C--C-CCCSEE
T ss_pred CCCcCEEEEEcccchHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHH----C--C-CCcCEE
Confidence 4567899999999999999998874 3599999999999999998755433 468899998855 1 2 589999
Q ss_pred EechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCCCc
Q psy1107 155 TLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLHD 194 (218)
Q Consensus 155 ~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~~~ 194 (218)
++..+++|+++.+...++.++.++|+|||.+++.+.....
T Consensus 160 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 199 (318)
T 2fk8_A 160 VSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSYH 199 (318)
T ss_dssp EEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECCC
T ss_pred EEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccCC
Confidence 9999999998778999999999999999999998866544
No 74
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.66 E-value=1e-15 Score=117.35 Aligned_cols=106 Identities=13% Similarity=0.094 Sum_probs=84.6
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC-CCceEEeccCCCcccccCCCCCcccEEEe
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA-SKMNVFPCDVTEDDILNQVPHNSVDIATL 156 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~~~~D~i~~ 156 (218)
.++.+|||+|||+|..+..++...+..+|+++|+|+.+++.++++....+ .++.++++|+.+.... ....++||+|++
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~~~~~fD~V~~ 147 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQR-KDVRESYDIVTA 147 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTC-TTTTTCEEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhccc-ccccCCccEEEE
Confidence 46789999999999999999876677799999999999999998765544 4699999988652110 111458999998
Q ss_pred chhhcCCCcchHHHHHHHHHHhccCCeEEEEEec
Q psy1107 157 IFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 157 ~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~ 190 (218)
.. + .+...++..+.++|+|||.+++...
T Consensus 148 ~~----~--~~~~~~l~~~~~~LkpgG~l~~~~g 175 (240)
T 1xdz_A 148 RA----V--ARLSVLSELCLPLVKKNGLFVALKA 175 (240)
T ss_dssp EC----C--SCHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred ec----c--CCHHHHHHHHHHhcCCCCEEEEEeC
Confidence 65 2 3678899999999999999998753
No 75
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.66 E-value=2.1e-15 Score=113.98 Aligned_cols=98 Identities=20% Similarity=0.307 Sum_probs=84.1
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEec
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATLI 157 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~~ 157 (218)
.++.+|||+|||+|.++..++.. +++|+|+.+++.++.+ ++.+..+|+.. .+++.++||+|++.
T Consensus 46 ~~~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~~------~~~~~~~d~~~----~~~~~~~fD~v~~~ 109 (219)
T 1vlm_A 46 LPEGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARKR------GVFVLKGTAEN----LPLKDESFDFALMV 109 (219)
T ss_dssp CCSSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHHT------TCEEEECBTTB----CCSCTTCEEEEEEE
T ss_pred CCCCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHhc------CCEEEEccccc----CCCCCCCeeEEEEc
Confidence 34889999999999999888653 9999999999999986 57888888866 34566789999999
Q ss_pred hhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCCC
Q psy1107 158 FVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLH 193 (218)
Q Consensus 158 ~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~~ 193 (218)
.++++++ +...++..+.++|+|||.+++......
T Consensus 110 ~~l~~~~--~~~~~l~~~~~~L~pgG~l~i~~~~~~ 143 (219)
T 1vlm_A 110 TTICFVD--DPERALKEAYRILKKGGYLIVGIVDRE 143 (219)
T ss_dssp SCGGGSS--CHHHHHHHHHHHEEEEEEEEEEEECSS
T ss_pred chHhhcc--CHHHHHHHHHHHcCCCcEEEEEEeCCc
Confidence 9999994 678999999999999999999876543
No 76
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.66 E-value=2.7e-15 Score=112.22 Aligned_cols=102 Identities=14% Similarity=0.032 Sum_probs=84.3
Q ss_pred CCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC-CCceEEeccCCCcccccCCCCCcccEEEec
Q psy1107 79 GEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA-SKMNVFPCDVTEDDILNQVPHNSVDIATLI 157 (218)
Q Consensus 79 ~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~~~~D~i~~~ 157 (218)
++.+|||+|||+|..+..++...|..+++++|+|+.+++.++.+....+ .++.+.++|+.+. . +.++||+|++.
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~----~-~~~~~D~i~~~ 139 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEF----P-SEPPFDGVISR 139 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTS----C-CCSCEEEEECS
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhC----C-ccCCcCEEEEe
Confidence 4789999999999999999988777899999999999999998765444 3589999998762 1 34589999975
Q ss_pred hhhcCCCcchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 158 FVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 158 ~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
. + .+...++..+.++|+|||.+++....
T Consensus 140 ~----~--~~~~~~l~~~~~~L~~gG~l~~~~~~ 167 (207)
T 1jsx_A 140 A----F--ASLNDMVSWCHHLPGEQGRFYALKGQ 167 (207)
T ss_dssp C----S--SSHHHHHHHHTTSEEEEEEEEEEESS
T ss_pred c----c--CCHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 3 2 35678999999999999999997644
No 77
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.66 E-value=6.2e-16 Score=118.36 Aligned_cols=107 Identities=19% Similarity=0.340 Sum_probs=88.9
Q ss_pred hhcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEE
Q psy1107 75 NQDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIA 154 (218)
Q Consensus 75 ~~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i 154 (218)
....++.+|||+|||+|.++..++.. .+++++|+|+.+++.++++....+.++.+.+.|+.+ .+++ ++||+|
T Consensus 29 ~~~~~~~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~----~~~~-~~fD~v 100 (243)
T 3d2l_A 29 EQVEPGKRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRE----LELP-EPVDAI 100 (243)
T ss_dssp HHSCTTCEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGG----CCCS-SCEEEE
T ss_pred HHcCCCCeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhh----cCCC-CCcCEE
Confidence 33456789999999999999999876 599999999999999998765444678999999876 2333 589999
Q ss_pred Eech-hhcCCC-cchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 155 TLIF-VLSAIH-PNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 155 ~~~~-~l~~~~-~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
++.. +++|+. +.+...+++.+.++|+|||.+++..
T Consensus 101 ~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 137 (243)
T 3d2l_A 101 TILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDV 137 (243)
T ss_dssp EECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEc
Confidence 9986 888884 4678899999999999999999854
No 78
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.66 E-value=9.2e-16 Score=116.01 Aligned_cols=108 Identities=14% Similarity=0.150 Sum_probs=86.4
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEe
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATL 156 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~ 156 (218)
..++.+|||+|||+|.++..++..+ .+++++|+|+.+++.++++ .++.+...|+.+.......+..+||+|++
T Consensus 50 ~~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~~~~~~~~~~~~~~~fD~v~~ 122 (227)
T 3e8s_A 50 GRQPERVLDLGCGEGWLLRALADRG--IEAVGVDGDRTLVDAARAA-----GAGEVHLASYAQLAEAKVPVGKDYDLICA 122 (227)
T ss_dssp HTCCSEEEEETCTTCHHHHHHHTTT--CEEEEEESCHHHHHHHHHT-----CSSCEEECCHHHHHTTCSCCCCCEEEEEE
T ss_pred cCCCCEEEEeCCCCCHHHHHHHHCC--CEEEEEcCCHHHHHHHHHh-----cccccchhhHHhhcccccccCCCccEEEE
Confidence 3456899999999999999998874 5999999999999999987 45677777766532112233446999999
Q ss_pred chhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCCCc
Q psy1107 157 IFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLHD 194 (218)
Q Consensus 157 ~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~~~ 194 (218)
..+++ . .+...+++.+.++|+|||.+++.+.....
T Consensus 123 ~~~l~-~--~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 157 (227)
T 3e8s_A 123 NFALL-H--QDIIELLSAMRTLLVPGGALVIQTLHPWS 157 (227)
T ss_dssp ESCCC-S--SCCHHHHHHHHHTEEEEEEEEEEECCTTT
T ss_pred Cchhh-h--hhHHHHHHHHHHHhCCCeEEEEEecCccc
Confidence 99888 3 46778999999999999999998865543
No 79
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.65 E-value=5.6e-15 Score=115.38 Aligned_cols=106 Identities=16% Similarity=0.094 Sum_probs=86.0
Q ss_pred hhcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC-CCceEEeccCCCcccccCCCCCcccE
Q psy1107 75 NQDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA-SKMNVFPCDVTEDDILNQVPHNSVDI 153 (218)
Q Consensus 75 ~~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~~~~D~ 153 (218)
....++.+|||||||+|.++..++...+.++|+++|+|+.+++.|+++....+ .++.+.++|+.+ . +.++||+
T Consensus 118 a~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~----l--~d~~FDv 191 (298)
T 3fpf_A 118 GRFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETV----I--DGLEFDV 191 (298)
T ss_dssp TTCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGG----G--GGCCCSE
T ss_pred cCCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhh----C--CCCCcCE
Confidence 56678999999999999877555444456899999999999999999865433 689999999866 2 2568999
Q ss_pred EEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 154 ATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 154 i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
|++... . .+...+++.+.++|||||.|++....
T Consensus 192 V~~~a~---~--~d~~~~l~el~r~LkPGG~Lvv~~~~ 224 (298)
T 3fpf_A 192 LMVAAL---A--EPKRRVFRNIHRYVDTETRIIYRTYT 224 (298)
T ss_dssp EEECTT---C--SCHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred EEECCC---c--cCHHHHHHHHHHHcCCCcEEEEEcCc
Confidence 997543 2 47789999999999999999998743
No 80
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.65 E-value=6.1e-16 Score=121.73 Aligned_cols=111 Identities=18% Similarity=0.243 Sum_probs=81.3
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCC-----------------------------
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDAS----------------------------- 128 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~----------------------------- 128 (218)
.++.+|||||||+|.....++.. +..+|+|+|+|+.+++.++++....+.
T Consensus 70 ~~~~~vLDiGcG~G~~~~l~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 148 (289)
T 2g72_A 70 VSGRTLIDIGSGPTVYQLLSACS-HFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLR 148 (289)
T ss_dssp SCCSEEEEETCTTCCGGGTTGGG-GCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHH
T ss_pred CCCCeEEEECCCcChHHHHhhcc-CCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHH
Confidence 36789999999999955444432 235999999999999998874321100
Q ss_pred --CceEEeccCCCc-ccc-cCCCCCcccEEEechhhcCCCcc--hHHHHHHHHHHhccCCeEEEEEe
Q psy1107 129 --KMNVFPCDVTED-DIL-NQVPHNSVDIATLIFVLSAIHPN--KFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 129 --~i~~~~~d~~~~-~~~-~~~~~~~~D~i~~~~~l~~~~~~--~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
.+.++.+|+.+. .+. ..++.++||+|++..++++++++ ++..++.++.++|||||.|++..
T Consensus 149 ~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~ 215 (289)
T 2g72_A 149 ARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIG 215 (289)
T ss_dssp HHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 134566687662 111 12445679999999999996644 78899999999999999999974
No 81
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.65 E-value=1.6e-16 Score=120.15 Aligned_cols=111 Identities=17% Similarity=0.195 Sum_probs=87.1
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC-CCceEEeccCCCcccccCCCCCcccEEEe
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA-SKMNVFPCDVTEDDILNQVPHNSVDIATL 156 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~~~~D~i~~ 156 (218)
.+..+|||||||+|.++..++..+|...++|+|+|+.+++.++.++...+ .++.++++|+.+. +...++.+++|.|++
T Consensus 33 ~~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~-l~~~~~~~~~d~v~~ 111 (218)
T 3dxy_A 33 REAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEV-LHKMIPDNSLRMVQL 111 (218)
T ss_dssp SCCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHH-HHHHSCTTCEEEEEE
T ss_pred CCCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHH-HHHHcCCCChheEEE
Confidence 35679999999999999999999888899999999999999998865444 5799999998652 011256779999998
Q ss_pred chhhcCCCcchH------HHHHHHHHHhccCCeEEEEEe
Q psy1107 157 IFVLSAIHPNKF------STVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 157 ~~~l~~~~~~~~------~~~l~~~~~~Lk~gG~li~~~ 189 (218)
.+...+...... ..++..+.++|||||.|++..
T Consensus 112 ~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~t 150 (218)
T 3dxy_A 112 FFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMAT 150 (218)
T ss_dssp ESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEE
T ss_pred eCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEe
Confidence 754333221111 258999999999999999976
No 82
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.65 E-value=6.1e-16 Score=116.53 Aligned_cols=110 Identities=15% Similarity=0.165 Sum_probs=86.4
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC-CCceEEeccCCCcccccCCCCCcccEEEe
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA-SKMNVFPCDVTEDDILNQVPHNSVDIATL 156 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~~~~D~i~~ 156 (218)
.++.+|||||||+|.++..++...|..+++|+|+|+.+++.|+.++...+ .++.++++|+.+ +...++.++||.|++
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~--l~~~~~~~~~d~v~~ 114 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADT--LTDVFEPGEVKRVYL 114 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGG--HHHHCCTTSCCEEEE
T ss_pred CCCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHH--HHhhcCcCCcCEEEE
Confidence 45679999999999999999998888899999999999999998765444 579999999876 212256678999987
Q ss_pred chhhcCCCcc------hHHHHHHHHHHhccCCeEEEEEe
Q psy1107 157 IFVLSAIHPN------KFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 157 ~~~l~~~~~~------~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
.+...+.... ....++..+.++|+|||.|++..
T Consensus 115 ~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 115 NFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp ESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred ECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEe
Confidence 6533222100 13578999999999999999875
No 83
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.65 E-value=8.5e-16 Score=123.24 Aligned_cols=110 Identities=17% Similarity=0.157 Sum_probs=93.3
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccCCCCCcccEEE
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQVPHNSVDIAT 155 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~~D~i~ 155 (218)
.+..+|||+|||+|..+..+++.+|..+++++|+ +.+++.++++....+ .++.+...|+.+ +++. +||+|+
T Consensus 168 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-----~~p~-~~D~v~ 240 (332)
T 3i53_A 168 AALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFD-----PLPA-GAGGYV 240 (332)
T ss_dssp GGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-----CCCC-SCSEEE
T ss_pred CCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCC-----CCCC-CCcEEE
Confidence 3467999999999999999999888889999999 999999988754433 579999999863 2333 799999
Q ss_pred echhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCCCc
Q psy1107 156 LIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLHD 194 (218)
Q Consensus 156 ~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~~~ 194 (218)
+..++++++++....+++++++.|+|||.|++.+....+
T Consensus 241 ~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 279 (332)
T 3i53_A 241 LSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGD 279 (332)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC-
T ss_pred EehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCC
Confidence 999999998666789999999999999999998865443
No 84
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.64 E-value=7.9e-17 Score=117.26 Aligned_cols=112 Identities=12% Similarity=0.151 Sum_probs=88.3
Q ss_pred HHHhhhcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCc
Q psy1107 71 HEFVNQDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNS 150 (218)
Q Consensus 71 ~~~~~~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~ 150 (218)
..+.....++.+|||+|||+|.++..++...|..+|+++|+|+.+++.+++++...+....+..+|... ..+.++
T Consensus 41 ~~~~~~l~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d~~~-----~~~~~~ 115 (200)
T 3fzg_A 41 TYVFGNIKHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKES-----DVYKGT 115 (200)
T ss_dssp HHHHHHSCCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEEECCHH-----HHTTSE
T ss_pred HHHHhhcCCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEEecccc-----cCCCCC
Confidence 333344577889999999999999999988888899999999999999999976655332333355533 245568
Q ss_pred ccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 151 VDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 151 ~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
||+|++..++|++ ++....+..+.+.|+|||+++--+
T Consensus 116 ~DvVLa~k~LHlL--~~~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 116 YDVVFLLKMLPVL--KQQDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp EEEEEEETCHHHH--HHTTCCHHHHHHTCEEEEEEEEEE
T ss_pred cChhhHhhHHHhh--hhhHHHHHHHHHHhCCCCEEEEeC
Confidence 9999999999999 455566668999999999777654
No 85
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.64 E-value=1.2e-15 Score=114.91 Aligned_cols=110 Identities=16% Similarity=0.203 Sum_probs=87.7
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC-CCceEEeccCCCcccccCCCCCcccEEEe
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA-SKMNVFPCDVTEDDILNQVPHNSVDIATL 156 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~~~~D~i~~ 156 (218)
.++.+|||+|||+|.++..++...|..+++|+|+|+.+++.|+.++...+ .++.++++|+.+ +...++.++||+|++
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~--~~~~~~~~~~D~i~~ 117 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSD--LTDYFEDGEIDRLYL 117 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSC--GGGTSCTTCCSEEEE
T ss_pred CCCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHH--HHhhcCCCCCCEEEE
Confidence 45779999999999999999998888899999999999999998865444 589999999876 222356678999998
Q ss_pred chhhcCCCcc------hHHHHHHHHHHhccCCeEEEEEe
Q psy1107 157 IFVLSAIHPN------KFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 157 ~~~l~~~~~~------~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
.....+.... ....++..+.++|+|||.+++..
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (214)
T 1yzh_A 118 NFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKT 156 (214)
T ss_dssp ESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEE
T ss_pred ECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEe
Confidence 7543222100 23579999999999999999875
No 86
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.64 E-value=2.5e-15 Score=110.89 Aligned_cols=105 Identities=15% Similarity=0.197 Sum_probs=89.6
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEe
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATL 156 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~ 156 (218)
..++.+|||+|||+|.++..++..+ .+++++|+++.+++.++.+. .++.+...|+.+ .+++.++||+|++
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~----~~~~~~~~d~~~----~~~~~~~~D~i~~ 113 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQG--HDVLGTDLDPILIDYAKQDF----PEARWVVGDLSV----DQISETDFDLIVS 113 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHTT--CEEEEEESCHHHHHHHHHHC----TTSEEEECCTTT----SCCCCCCEEEEEE
T ss_pred ccCCCeEEEECCCCCHHHHHHHHCC--CcEEEEcCCHHHHHHHHHhC----CCCcEEEccccc----CCCCCCceeEEEE
Confidence 4577899999999999999998874 59999999999999999865 358899999876 3455678999999
Q ss_pred c-hhhcCCCcchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 157 I-FVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 157 ~-~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
. .+++++++++...++..+.++|+|||.+++....
T Consensus 114 ~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~ 149 (195)
T 3cgg_A 114 AGNVMGFLAEDGREPALANIHRALGADGRAVIGFGA 149 (195)
T ss_dssp CCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEET
T ss_pred CCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCC
Confidence 8 6888887677889999999999999999986643
No 87
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.63 E-value=1.1e-15 Score=111.45 Aligned_cols=109 Identities=14% Similarity=0.110 Sum_probs=85.8
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccCCCCCcccE
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQVPHNSVDI 153 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~~D~ 153 (218)
...++.+|||+|||+|.++..++...+..+++++|+++.+++.++++....+ .++ ++..|..+. .+...++||+
T Consensus 22 ~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~---~~~~~~~~D~ 97 (178)
T 3hm2_A 22 APKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRA---FDDVPDNPDV 97 (178)
T ss_dssp CCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGG---GGGCCSCCSE
T ss_pred cccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhh---hhccCCCCCE
Confidence 3456789999999999999999988777899999999999999998755443 267 777776541 1222258999
Q ss_pred EEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCCCc
Q psy1107 154 ATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLHD 194 (218)
Q Consensus 154 i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~~~ 194 (218)
|++..++++ ..+++.+.++|+|||.+++.......
T Consensus 98 i~~~~~~~~------~~~l~~~~~~L~~gG~l~~~~~~~~~ 132 (178)
T 3hm2_A 98 IFIGGGLTA------PGVFAAAWKRLPVGGRLVANAVTVES 132 (178)
T ss_dssp EEECC-TTC------TTHHHHHHHTCCTTCEEEEEECSHHH
T ss_pred EEECCcccH------HHHHHHHHHhcCCCCEEEEEeecccc
Confidence 999887765 46889999999999999998765444
No 88
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.63 E-value=1.1e-15 Score=113.59 Aligned_cols=114 Identities=15% Similarity=0.103 Sum_probs=89.1
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhcC-CccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccCCCCCccc
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSWS-KICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQVPHNSVD 152 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~~-~~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~~D 152 (218)
...++.+|||+|||+|.++..++... +..+++++|+++.+++.++++....+ .++.+++.|+.+. .....++||
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~~~~fD 95 (197)
T 3eey_A 19 FVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNM---DKYIDCPVK 95 (197)
T ss_dssp HCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGG---GGTCCSCEE
T ss_pred cCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHH---hhhccCCce
Confidence 45677899999999999999998873 55699999999999999998865543 4789999998662 223446899
Q ss_pred EEEechhhcC-------CCcchHHHHHHHHHHhccCCeEEEEEecCC
Q psy1107 153 IATLIFVLSA-------IHPNKFSTVVKNLFIMLKSGGIILFRDYGL 192 (218)
Q Consensus 153 ~i~~~~~l~~-------~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~ 192 (218)
+|++...+.. ..+.+...++..+.++|+|||.+++..+..
T Consensus 96 ~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 142 (197)
T 3eey_A 96 AVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYG 142 (197)
T ss_dssp EEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCB
T ss_pred EEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccC
Confidence 9998764411 112355679999999999999999987654
No 89
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.63 E-value=9.1e-16 Score=123.06 Aligned_cols=111 Identities=14% Similarity=0.154 Sum_probs=94.3
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccCCCCCcccEEE
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQVPHNSVDIAT 155 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~~D~i~ 155 (218)
.+..+|||+|||+|..+..+++..|..+++++|++ .+++.++++....+ .++.+..+|+.+ .+++. .||+|+
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~----~~~~~-~~D~v~ 237 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFE----VDYGN-DYDLVL 237 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTT----SCCCS-CEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEeccccc----CCCCC-CCcEEE
Confidence 56789999999999999999998888899999999 99999988754333 369999999876 23444 499999
Q ss_pred echhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCCCc
Q psy1107 156 LIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLHD 194 (218)
Q Consensus 156 ~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~~~ 194 (218)
+..+++++++.+...+++++.++|+|||.+++.+....+
T Consensus 238 ~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 276 (335)
T 2r3s_A 238 LPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNS 276 (335)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCT
T ss_pred EcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCC
Confidence 999999998777789999999999999999998866543
No 90
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.63 E-value=1.2e-15 Score=112.76 Aligned_cols=110 Identities=12% Similarity=0.036 Sum_probs=87.9
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC-CCceEEeccCCCcccccCCCCCcccEEEe
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA-SKMNVFPCDVTEDDILNQVPHNSVDIATL 156 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~~~~D~i~~ 156 (218)
.++.+|||+|||+|.++..++..+ ..+++++|+|+.+++.++++....+ .++.+++.|+.+.. ..++.++||+|++
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--~~~~~~~fD~i~~ 119 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRG-AASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVV--AAGTTSPVDLVLA 119 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTT-CSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHH--HHCCSSCCSEEEE
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCC-CCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHH--hhccCCCccEEEE
Confidence 567899999999999999887754 3489999999999999999866544 57999999986621 1234568999999
Q ss_pred chhhcCCCcchHHHHHHHHHH--hccCCeEEEEEecC
Q psy1107 157 IFVLSAIHPNKFSTVVKNLFI--MLKSGGIILFRDYG 191 (218)
Q Consensus 157 ~~~l~~~~~~~~~~~l~~~~~--~Lk~gG~li~~~~~ 191 (218)
..++++. ..+...++..+.+ +|+|||.+++....
T Consensus 120 ~~p~~~~-~~~~~~~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 120 DPPYNVD-SADVDAILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp CCCTTSC-HHHHHHHHHHHHHSSSCCTTCEEEEEEET
T ss_pred CCCCCcc-hhhHHHHHHHHHhcCccCCCeEEEEEecC
Confidence 7765543 2467889999998 99999999997644
No 91
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.63 E-value=1.1e-15 Score=120.54 Aligned_cols=110 Identities=14% Similarity=0.126 Sum_probs=81.3
Q ss_pred CCCcEEEEecCCCchhHHHH----hhcCCccEE--EEEeCCHHHHHHHHhCCccc--CCCceEE--eccCCCcccc----
Q psy1107 78 VGEGVLLEVGCGVGNFIFPL----LSWSKICYI--HACDISPRAVNFFKLNPLYD--ASKMNVF--PCDVTEDDIL---- 143 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~----~~~~~~~~v--~~~D~s~~~~~~~~~~~~~~--~~~i~~~--~~d~~~~~~~---- 143 (218)
.++.+|||||||+|..+..+ +..++...+ +++|+|+.+++.++++.... ..++.+. ..++.+ +.
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~--~~~~~~ 128 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSE--YQSRML 128 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHH--HHHHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhh--hhhhhc
Confidence 45679999999999765433 334455544 99999999999998875322 1345443 333322 11
Q ss_pred cCCCCCcccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 144 NQVPHNSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 144 ~~~~~~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
.++++++||+|++..+++|++ ++..+++++.++|||||.|++....
T Consensus 129 ~~~~~~~fD~V~~~~~l~~~~--d~~~~l~~~~r~LkpgG~l~i~~~~ 174 (292)
T 2aot_A 129 EKKELQKWDFIHMIQMLYYVK--DIPATLKFFHSLLGTNAKMLIIVVS 174 (292)
T ss_dssp TTTCCCCEEEEEEESCGGGCS--CHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred cccCCCceeEEEEeeeeeecC--CHHHHHHHHHHHcCCCcEEEEEEec
Confidence 124567899999999999995 7889999999999999999997644
No 92
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.62 E-value=4.9e-16 Score=121.56 Aligned_cols=107 Identities=20% Similarity=0.216 Sum_probs=85.7
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC-CCceEEeccCCCcccccCCCCCcccEEEe
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA-SKMNVFPCDVTEDDILNQVPHNSVDIATL 156 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~~~~D~i~~ 156 (218)
.++.+|||+|||+|..+..++...|..+++++|+|+.+++.++.+....+ .++.+.++|+.+. ++.++||+|++
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~-----~~~~~fD~Iv~ 182 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSA-----LAGQQFAMIVS 182 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGG-----GTTCCEEEEEE
T ss_pred cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhh-----cccCCccEEEE
Confidence 56779999999999999999987777899999999999999998865544 4799999998662 23458999999
Q ss_pred ch-------------hhcCCCc----------chHHHHHHHHHHhccCCeEEEEEe
Q psy1107 157 IF-------------VLSAIHP----------NKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 157 ~~-------------~l~~~~~----------~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
+. +++|.|. +....++..+.++|+|||.+++..
T Consensus 183 npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~ 238 (276)
T 2b3t_A 183 NPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEH 238 (276)
T ss_dssp CCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 73 2323221 346788999999999999998864
No 93
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.62 E-value=2.4e-15 Score=122.34 Aligned_cols=111 Identities=14% Similarity=0.202 Sum_probs=94.1
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccCCCCCcccEE
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQVPHNSVDIA 154 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~~D~i 154 (218)
..+..+|||+|||+|.++..+++.+|..+++++|+ +.+++.++++....+ .++.+..+|+.. +++. .||+|
T Consensus 200 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~-----~~p~-~~D~v 272 (369)
T 3gwz_A 200 FSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFE-----TIPD-GADVY 272 (369)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTT-----CCCS-SCSEE
T ss_pred CccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCC-----CCCC-CceEE
Confidence 35678999999999999999999998889999999 999999998754332 579999999873 3344 79999
Q ss_pred EechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCCCc
Q psy1107 155 TLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLHD 194 (218)
Q Consensus 155 ~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~~~ 194 (218)
++..+++++++.....+++++.+.|+|||.|++.+....+
T Consensus 273 ~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~ 312 (369)
T 3gwz_A 273 LIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDE 312 (369)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCS
T ss_pred EhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 9999999998666678999999999999999998855443
No 94
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.62 E-value=1.6e-15 Score=120.64 Aligned_cols=114 Identities=16% Similarity=0.189 Sum_probs=90.1
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCccc--------CCCceEEeccCCCcccccCCC--
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYD--------ASKMNVFPCDVTEDDILNQVP-- 147 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~--------~~~i~~~~~d~~~~~~~~~~~-- 147 (218)
.++.+|||+|||+|.++..++.. +..+++++|+|+.+++.++.+.... ..++.+++.|+.......+++
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 111 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKG-RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDP 111 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSST
T ss_pred CCCCEEEEECCCCcHHHHHHHhc-CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccC
Confidence 46789999999999999998874 3469999999999999998864321 236899999998743222343
Q ss_pred CCcccEEEechhhcCC--CcchHHHHHHHHHHhccCCeEEEEEecCC
Q psy1107 148 HNSVDIATLIFVLSAI--HPNKFSTVVKNLFIMLKSGGIILFRDYGL 192 (218)
Q Consensus 148 ~~~~D~i~~~~~l~~~--~~~~~~~~l~~~~~~Lk~gG~li~~~~~~ 192 (218)
.++||+|++..+++++ +..+...++.++.++|+|||.+++.....
T Consensus 112 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 158 (313)
T 3bgv_A 112 QMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNS 158 (313)
T ss_dssp TCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred CCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCCh
Confidence 3589999999999887 33567899999999999999999987654
No 95
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.62 E-value=2.4e-15 Score=112.97 Aligned_cols=107 Identities=15% Similarity=0.097 Sum_probs=77.7
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEe
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATL 156 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~ 156 (218)
..++.+|||+|||+|..+..++...+..+|+|+|+|+.+++.+.+.+... .++.++..|+.......++. ++||+|++
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~-~~v~~~~~d~~~~~~~~~~~-~~fD~V~~ 132 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER-NNIIPLLFDASKPWKYSGIV-EKVDLIYQ 132 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC-SSEEEECSCTTCGGGTTTTC-CCEEEEEE
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC-CCeEEEEcCCCCchhhcccc-cceeEEEE
Confidence 35678999999999999999988765569999999998765444332211 36788888876632112333 68999998
Q ss_pred chhhcCCCcchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 157 IFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 157 ~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
.. ..+.....++.++.++|||||.|++..
T Consensus 133 ~~----~~~~~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 133 DI----AQKNQIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp CC----CSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ec----cChhHHHHHHHHHHHHhCCCCEEEEEE
Confidence 62 122345566899999999999999973
No 96
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.62 E-value=1.3e-15 Score=123.13 Aligned_cols=110 Identities=13% Similarity=0.215 Sum_probs=92.7
Q ss_pred CcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccCCCCCcccEEEec
Q psy1107 80 EGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQVPHNSVDIATLI 157 (218)
Q Consensus 80 ~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~~D~i~~~ 157 (218)
+.+|||||||+|.++..+++.+|..+++++|+ +.+++.++++....+ .++.+..+|+.+.. .+..+.||+|++.
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~~~~~~D~v~~~ 255 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDAR---NFEGGAADVVMLN 255 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGG---GGTTCCEEEEEEE
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCc---ccCCCCccEEEEe
Confidence 78999999999999999999988889999999 889998887654333 46999999987732 1123469999999
Q ss_pred hhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCCC
Q psy1107 158 FVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLH 193 (218)
Q Consensus 158 ~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~~ 193 (218)
.+++++++.+...+++++.+.|+|||.|++.+....
T Consensus 256 ~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 291 (352)
T 3mcz_A 256 DCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMN 291 (352)
T ss_dssp SCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCC
T ss_pred cccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 999999877788999999999999999999885443
No 97
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.61 E-value=2.4e-15 Score=114.32 Aligned_cols=111 Identities=14% Similarity=0.144 Sum_probs=86.7
Q ss_pred hhcCCCcEEEEecCC-CchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccE
Q psy1107 75 NQDVGEGVLLEVGCG-VGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDI 153 (218)
Q Consensus 75 ~~~~~~~~vLDiGcG-~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~ 153 (218)
....++.+|||+||| +|.++..++... ..+++++|+++.+++.++.+....+.++.+.++|+.. ...++.++||+
T Consensus 51 ~~~~~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~---~~~~~~~~fD~ 126 (230)
T 3evz_A 51 TFLRGGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGI---IKGVVEGTFDV 126 (230)
T ss_dssp TTCCSSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCS---STTTCCSCEEE
T ss_pred hhcCCCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchh---hhhcccCceeE
Confidence 345678899999999 999999998874 3699999999999999998876555589999999754 23455578999
Q ss_pred EEechhhcCCCc-----------------chHHHHHHHHHHhccCCeEEEEEe
Q psy1107 154 ATLIFVLSAIHP-----------------NKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 154 i~~~~~l~~~~~-----------------~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
|++...+.+.+. +....++..+.++|+|||.+++..
T Consensus 127 I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 179 (230)
T 3evz_A 127 IFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYL 179 (230)
T ss_dssp EEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred EEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEe
Confidence 998755443321 124788999999999999999864
No 98
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.61 E-value=3.6e-15 Score=120.81 Aligned_cols=110 Identities=19% Similarity=0.300 Sum_probs=93.2
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccCCCCCcccEE
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQVPHNSVDIA 154 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~~D~i 154 (218)
..+..+|||+|||+|.++..+++.+|..+++++|+ +.+++.++++....+ .++.+..+|+.+ .+++. .|+|
T Consensus 188 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~----~~~~~--~D~v 260 (359)
T 1x19_A 188 LDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYK----ESYPE--ADAV 260 (359)
T ss_dssp CTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTT----SCCCC--CSEE
T ss_pred CCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCcccc----CCCCC--CCEE
Confidence 45678999999999999999999988889999999 999999998754332 459999999877 23433 4999
Q ss_pred EechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCCC
Q psy1107 155 TLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLH 193 (218)
Q Consensus 155 ~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~~ 193 (218)
++..++++++++....+++++.++|+|||.+++.++...
T Consensus 261 ~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 299 (359)
T 1x19_A 261 LFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVID 299 (359)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCC
T ss_pred EEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccC
Confidence 999999999866789999999999999999999885543
No 99
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.61 E-value=2.8e-15 Score=114.50 Aligned_cols=112 Identities=12% Similarity=0.195 Sum_probs=82.4
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCc-------ccCCCceEEeccCCCcccccCCCCC
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPL-------YDASKMNVFPCDVTEDDILNQVPHN 149 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~-------~~~~~i~~~~~d~~~~~~~~~~~~~ 149 (218)
..+..+|||||||+|.++..++...|...++|+|+|+.+++.|+.++. ....++.++++|+.+. +...++.+
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~-l~~~~~~~ 122 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKH-LPNFFYKG 122 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTC-HHHHCCTT
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHh-hhhhCCCc
Confidence 345679999999999999999998888899999999999998876532 1225899999998651 11125677
Q ss_pred cccEEEechhhcCCCc-c-----hHHHHHHHHHHhccCCeEEEEEe
Q psy1107 150 SVDIATLIFVLSAIHP-N-----KFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 150 ~~D~i~~~~~l~~~~~-~-----~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
++|.|++.+...+... . ....++..+.++|+|||.|++..
T Consensus 123 ~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~t 168 (235)
T 3ckk_A 123 QLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTIT 168 (235)
T ss_dssp CEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred CeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEe
Confidence 8999987543222100 0 01468999999999999999865
No 100
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.61 E-value=9.4e-15 Score=110.72 Aligned_cols=109 Identities=16% Similarity=0.092 Sum_probs=88.0
Q ss_pred hhcCCCcEEEEecCCCchhHHHHhhc-CCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccE
Q psy1107 75 NQDVGEGVLLEVGCGVGNFIFPLLSW-SKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDI 153 (218)
Q Consensus 75 ~~~~~~~~vLDiGcG~G~~~~~~~~~-~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~ 153 (218)
....|+.+|||+|||+|.++..++.. +|..+|+++|+++.+++.+++++... .++..+..|...... .+....++|+
T Consensus 73 l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~-~ni~~V~~d~~~p~~-~~~~~~~vDv 150 (233)
T 4df3_A 73 LPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR-RNIFPILGDARFPEK-YRHLVEGVDG 150 (233)
T ss_dssp CCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC-TTEEEEESCTTCGGG-GTTTCCCEEE
T ss_pred cCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh-cCeeEEEEeccCccc-cccccceEEE
Confidence 44678999999999999999999976 78889999999999999998876543 478888888876443 2344568999
Q ss_pred EEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 154 ATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 154 i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
|++.. .+ +.+...++.++.+.|||||.+++..
T Consensus 151 Vf~d~--~~--~~~~~~~l~~~~r~LKpGG~lvI~i 182 (233)
T 4df3_A 151 LYADV--AQ--PEQAAIVVRNARFFLRDGGYMLMAI 182 (233)
T ss_dssp EEECC--CC--TTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEec--cC--ChhHHHHHHHHHHhccCCCEEEEEE
Confidence 88632 22 2577889999999999999999864
No 101
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.61 E-value=2.5e-15 Score=117.23 Aligned_cols=113 Identities=15% Similarity=0.171 Sum_probs=89.4
Q ss_pred cCCCcEEEEecCCCchhHHHHhhc-CCccEEEEEeCCHH------HHHHHHhCCcccC--CCceEEecc-CCCcccccCC
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSW-SKICYIHACDISPR------AVNFFKLNPLYDA--SKMNVFPCD-VTEDDILNQV 146 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~-~~~~~v~~~D~s~~------~~~~~~~~~~~~~--~~i~~~~~d-~~~~~~~~~~ 146 (218)
..++.+|||||||+|.++..++.. +|..+++++|+|+. +++.++++....+ .++.+..+| +... ..++
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~~~~ 118 (275)
T 3bkx_A 41 VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDD--LGPI 118 (275)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTC--CGGG
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhc--cCCC
Confidence 467789999999999999999987 46679999999997 8888888754433 478899887 3321 1345
Q ss_pred CCCcccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCCC
Q psy1107 147 PHNSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLH 193 (218)
Q Consensus 147 ~~~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~~ 193 (218)
+.++||+|++..+++|++ +...+++.+..+++|||.+++.++...
T Consensus 119 ~~~~fD~v~~~~~l~~~~--~~~~~~~~~~~l~~~gG~l~~~~~~~~ 163 (275)
T 3bkx_A 119 ADQHFDRVVLAHSLWYFA--SANALALLFKNMAAVCDHVDVAEWSMQ 163 (275)
T ss_dssp TTCCCSEEEEESCGGGSS--CHHHHHHHHHHHTTTCSEEEEEEECSS
T ss_pred CCCCEEEEEEccchhhCC--CHHHHHHHHHHHhCCCCEEEEEEecCC
Confidence 667899999999999996 445577777788888999999886543
No 102
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.61 E-value=3.2e-15 Score=115.86 Aligned_cols=103 Identities=12% Similarity=0.145 Sum_probs=84.8
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEec
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATLI 157 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~~ 157 (218)
.++.+|||+|||+|.++..++..+ .+++++|+|+.+++.++++.. . .+...|+.+ .+++.++||+|++.
T Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~l~~a~~~~~---~--~~~~~d~~~----~~~~~~~fD~v~~~ 121 (260)
T 2avn_A 53 KNPCRVLDLGGGTGKWSLFLQERG--FEVVLVDPSKEMLEVAREKGV---K--NVVEAKAED----LPFPSGAFEAVLAL 121 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHHTTT--CEEEEEESCHHHHHHHHHHTC---S--CEEECCTTS----CCSCTTCEEEEEEC
T ss_pred CCCCeEEEeCCCcCHHHHHHHHcC--CeEEEEeCCHHHHHHHHhhcC---C--CEEECcHHH----CCCCCCCEEEEEEc
Confidence 367899999999999999998875 589999999999999998754 1 277888876 34667789999998
Q ss_pred hhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCC
Q psy1107 158 FVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGL 192 (218)
Q Consensus 158 ~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~ 192 (218)
.++.|+.+ +...+++++.++|+|||.+++.....
T Consensus 122 ~~~~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 122 GDVLSYVE-NKDKAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp SSHHHHCS-CHHHHHHHHHHHEEEEEEEEEEEEBH
T ss_pred chhhhccc-cHHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 76666543 48899999999999999999976543
No 103
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.60 E-value=1.1e-14 Score=126.36 Aligned_cols=110 Identities=16% Similarity=0.318 Sum_probs=91.0
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcC-CccEEEEEeCCHHHHHHHHhCCc------c-cCCCceEEeccCCCcccccCCCC
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWS-KICYIHACDISPRAVNFFKLNPL------Y-DASKMNVFPCDVTEDDILNQVPH 148 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~-~~~~v~~~D~s~~~~~~~~~~~~------~-~~~~i~~~~~d~~~~~~~~~~~~ 148 (218)
..++.+|||+|||+|.++..++..+ +..+|+|+|+|+.+++.|+++.. . ...++.+.++|+.+ .++..
T Consensus 719 ~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~d----Lp~~d 794 (950)
T 3htx_A 719 ESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILE----FDSRL 794 (950)
T ss_dssp HSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTS----CCTTS
T ss_pred ccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHh----CCccc
Confidence 3478899999999999999999887 45699999999999999987321 1 12579999999987 45566
Q ss_pred CcccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 149 NSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 149 ~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
++||+|++..+++|+++.....++..+.++|||| .+++....
T Consensus 795 ~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN 836 (950)
T 3htx_A 795 HDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPN 836 (950)
T ss_dssp CSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECB
T ss_pred CCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecC
Confidence 7899999999999998666667999999999999 77776643
No 104
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.60 E-value=1.2e-14 Score=108.63 Aligned_cols=106 Identities=11% Similarity=-0.010 Sum_probs=83.9
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC-C-CceEEeccCCCcccccCCCCCcccE
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA-S-KMNVFPCDVTEDDILNQVPHNSVDI 153 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~-~-~i~~~~~d~~~~~~~~~~~~~~~D~ 153 (218)
...++.+|||+|||+|.++..++.. ..+|+++|+++.+++.|+++....+ . ++.++..|+.+. .....+||+
T Consensus 52 ~~~~~~~vLDlGcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~----~~~~~~~D~ 125 (204)
T 3njr_A 52 APRRGELLWDIGGGSGSVSVEWCLA--GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAA----LADLPLPEA 125 (204)
T ss_dssp CCCTTCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGG----GTTSCCCSE
T ss_pred CCCCCCEEEEecCCCCHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhh----cccCCCCCE
Confidence 3467789999999999999999887 4699999999999999998865444 3 799999998762 111237999
Q ss_pred EEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCCCc
Q psy1107 154 ATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLHD 194 (218)
Q Consensus 154 i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~~~ 194 (218)
|++...+ +.. ++..+.++|+|||.+++.......
T Consensus 126 v~~~~~~------~~~-~l~~~~~~LkpgG~lv~~~~~~~~ 159 (204)
T 3njr_A 126 VFIGGGG------SQA-LYDRLWEWLAPGTRIVANAVTLES 159 (204)
T ss_dssp EEECSCC------CHH-HHHHHHHHSCTTCEEEEEECSHHH
T ss_pred EEECCcc------cHH-HHHHHHHhcCCCcEEEEEecCccc
Confidence 9976522 345 899999999999999998755433
No 105
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.60 E-value=4e-15 Score=121.13 Aligned_cols=107 Identities=18% Similarity=0.195 Sum_probs=91.3
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccCCCCCcccEE
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQVPHNSVDIA 154 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~~D~i 154 (218)
..++.+|||+|||+|.++..++..+|..+++++|+ +.+++.++++....+ .++.+..+|+.+ .++. .||+|
T Consensus 180 ~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-----~~~~-~~D~v 252 (374)
T 1qzz_A 180 WSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK-----PLPV-TADVV 252 (374)
T ss_dssp CTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-----CCSC-CEEEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-----cCCC-CCCEE
Confidence 45678999999999999999999888889999999 999999998754333 479999999865 2233 49999
Q ss_pred EechhhcCCCcchHHHHHHHHHHhccCCeEEEEEec
Q psy1107 155 TLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 155 ~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~ 190 (218)
++..+++++++.....+++++.++|+|||.+++.+.
T Consensus 253 ~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 253 LLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 999999999765667899999999999999999887
No 106
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.59 E-value=6.4e-15 Score=119.99 Aligned_cols=108 Identities=18% Similarity=0.200 Sum_probs=90.6
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEec
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATLI 157 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~~ 157 (218)
.++.+|||+|||+|.++..++..+ .+|+++|+|+.+++.++.+....+.++.+++.|+.+ ...+.++||+|+++
T Consensus 232 ~~~~~VLDlGcG~G~~~~~la~~g--~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~----~~~~~~~fD~Ii~n 305 (381)
T 3dmg_A 232 VRGRQVLDLGAGYGALTLPLARMG--AEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDE----ALTEEARFDIIVTN 305 (381)
T ss_dssp TTTCEEEEETCTTSTTHHHHHHTT--CEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTT----TSCTTCCEEEEEEC
T ss_pred CCCCEEEEEeeeCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhh----ccccCCCeEEEEEC
Confidence 367899999999999999999875 599999999999999999876655568999999877 23334689999998
Q ss_pred hhhcC---CCcchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 158 FVLSA---IHPNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 158 ~~l~~---~~~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
.++++ ...+....++..+.++|+|||.+++....
T Consensus 306 pp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~ 342 (381)
T 3dmg_A 306 PPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNP 342 (381)
T ss_dssp CCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECT
T ss_pred CchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcC
Confidence 88776 33467789999999999999999997644
No 107
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.59 E-value=8e-15 Score=112.94 Aligned_cols=105 Identities=15% Similarity=0.067 Sum_probs=85.4
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC-CCceEEeccCCCcccccCCCCCcccEEEe
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA-SKMNVFPCDVTEDDILNQVPHNSVDIATL 156 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~~~~D~i~~ 156 (218)
.++.+|||+|||+|..+..++...|..+|+++|+|+.+++.++++....+ .++.++++|+.+... .....++||+|++
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~-~~~~~~~fD~I~s 157 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAR-EAGHREAYARAVA 157 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTT-STTTTTCEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhc-ccccCCCceEEEE
Confidence 46789999999999999999988888899999999999999999876555 469999999866211 1122368999998
Q ss_pred chhhcCCCcchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 157 IFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 157 ~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
..+ .+...++..+.++|||||.+++..
T Consensus 158 ~a~------~~~~~ll~~~~~~LkpgG~l~~~~ 184 (249)
T 3g89_A 158 RAV------APLCVLSELLLPFLEVGGAAVAMK 184 (249)
T ss_dssp ESS------CCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CCc------CCHHHHHHHHHHHcCCCeEEEEEe
Confidence 643 256789999999999999998866
No 108
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.59 E-value=7.6e-15 Score=118.45 Aligned_cols=107 Identities=20% Similarity=0.182 Sum_probs=86.9
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcc--cCCCceEEeccCCCcccccCCCCCcccEE
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLY--DASKMNVFPCDVTEDDILNQVPHNSVDIA 154 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~--~~~~i~~~~~d~~~~~~~~~~~~~~~D~i 154 (218)
..+..+|||||||+|..+..+++.+|..+++++|+ +.++. +++... ...++.+..+|+.+ +++ +||+|
T Consensus 182 ~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~~~~~v~~~~~d~~~-----~~p--~~D~v 251 (348)
T 3lst_A 182 FPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPDVAGRWKVVEGDFLR-----EVP--HADVH 251 (348)
T ss_dssp CCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGGGTTSEEEEECCTTT-----CCC--CCSEE
T ss_pred ccCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccCCCCCeEEEecCCCC-----CCC--CCcEE
Confidence 45678999999999999999999988889999999 44444 333322 23579999999863 233 79999
Q ss_pred EechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCCC
Q psy1107 155 TLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLH 193 (218)
Q Consensus 155 ~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~~ 193 (218)
++..++|++++.+...++++++++|||||.|++.+....
T Consensus 252 ~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~ 290 (348)
T 3lst_A 252 VLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVP 290 (348)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBC
T ss_pred EEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccC
Confidence 999999999866668999999999999999999886443
No 109
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.59 E-value=4.9e-16 Score=116.59 Aligned_cols=114 Identities=15% Similarity=0.071 Sum_probs=67.6
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEec
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATLI 157 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~~ 157 (218)
.++.+|||+|||+|.++..++..++..+++++|+|+.+++.++.+....+.++.+.++|+.+.........++||+|++.
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~n 108 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIEWLIERAERGRPWHAIVSN 108 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHHHHHHHHHHHHTTCCBSEEEEC
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHhhhhhhhhccCcccEEEEC
Confidence 67889999999999999999998877899999999999999998876544477888888765110000112689999995
Q ss_pred hhhc------CCCcch------------------HHHHHHHHHHhccCCeEEEEEecC
Q psy1107 158 FVLS------AIHPNK------------------FSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 158 ~~l~------~~~~~~------------------~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
..+. ++++.. ...++..+.++|+|||.+++...+
T Consensus 109 pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 166 (215)
T 4dzr_A 109 PPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVG 166 (215)
T ss_dssp CCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECT
T ss_pred CCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEEC
Confidence 4332 222111 167888899999999995555543
No 110
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.59 E-value=1.5e-14 Score=110.07 Aligned_cols=105 Identities=16% Similarity=0.176 Sum_probs=83.2
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEe
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATL 156 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~ 156 (218)
..++.+|||+|||+|..+..++...+..+|+++|+|+.+++.++.++... .++.++..|+.......++. ++||+|+
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~-~~v~~~~~d~~~~~~~~~~~-~~~D~v~- 148 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER-ENIIPILGDANKPQEYANIV-EKVDVIY- 148 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC-TTEEEEECCTTCGGGGTTTS-CCEEEEE-
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC-CCeEEEECCCCCcccccccC-ccEEEEE-
Confidence 35678999999999999999998865569999999999999998876544 68999999987632212333 5899998
Q ss_pred chhhcCCC-cchHHHHHHHHHHhccCCeEEEEE
Q psy1107 157 IFVLSAIH-PNKFSTVVKNLFIMLKSGGIILFR 188 (218)
Q Consensus 157 ~~~l~~~~-~~~~~~~l~~~~~~Lk~gG~li~~ 188 (218)
++++ ++....++..+.++|+|||.+++.
T Consensus 149 ----~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 149 ----EDVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp ----ECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ----EecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 3333 334477899999999999999996
No 111
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.59 E-value=3.4e-15 Score=113.56 Aligned_cols=102 Identities=16% Similarity=0.143 Sum_probs=83.7
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEE
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIAT 155 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~ 155 (218)
...++.+|||+|||+|.++..++..+ .+++++|+++.+++.++.+....+ ++.+...|+... ....++||+|+
T Consensus 67 ~~~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~-~v~~~~~d~~~~----~~~~~~fD~v~ 139 (231)
T 1vbf_A 67 DLHKGQKVLEIGTGIGYYTALIAEIV--DKVVSVEINEKMYNYASKLLSYYN-NIKLILGDGTLG----YEEEKPYDRVV 139 (231)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTCS-SEEEEESCGGGC----CGGGCCEEEEE
T ss_pred CCCCCCEEEEEcCCCCHHHHHHHHHc--CEEEEEeCCHHHHHHHHHHHhhcC-CeEEEECCcccc----cccCCCccEEE
Confidence 45677899999999999999998876 599999999999999998865444 789999988651 11245899999
Q ss_pred echhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCC
Q psy1107 156 LIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGL 192 (218)
Q Consensus 156 ~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~ 192 (218)
+..++++++ ..+.++|+|||.+++.....
T Consensus 140 ~~~~~~~~~--------~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 140 VWATAPTLL--------CKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp ESSBBSSCC--------HHHHHTEEEEEEEEEEECSS
T ss_pred ECCcHHHHH--------HHHHHHcCCCcEEEEEEcCC
Confidence 999998885 25788999999999986443
No 112
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.58 E-value=4.6e-15 Score=118.98 Aligned_cols=106 Identities=14% Similarity=0.155 Sum_probs=91.4
Q ss_pred cEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCccc--CCCceEEeccCCCcccccCCCCCcccEEEech
Q psy1107 81 GVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYD--ASKMNVFPCDVTEDDILNQVPHNSVDIATLIF 158 (218)
Q Consensus 81 ~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~--~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~~~ 158 (218)
.+|||+|||+|..+..++..+|..+++++|+ +.+++.++++.... ..++.+..+|+.+ +++ ++||+|++..
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-----~~~-~~~D~v~~~~ 241 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-----EVP-SNGDIYLLSR 241 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-----CCC-SSCSEEEEES
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-----CCC-CCCCEEEEch
Confidence 8999999999999999999888889999999 99999998876533 2579999999866 233 4799999999
Q ss_pred hhcCCCcchHHHHHHHHHHhccCCeEEEEEecCCC
Q psy1107 159 VLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLH 193 (218)
Q Consensus 159 ~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~~ 193 (218)
+++++++.....+++++.+.|+|||.+++.+....
T Consensus 242 vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 276 (334)
T 2ip2_A 242 IIGDLDEAASLRLLGNCREAMAGDGRVVVIERTIS 276 (334)
T ss_dssp CGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBC
T ss_pred hccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccC
Confidence 99999866777999999999999999999886543
No 113
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.58 E-value=1.4e-14 Score=109.72 Aligned_cols=102 Identities=17% Similarity=0.121 Sum_probs=86.2
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEec
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATLI 157 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~~ 157 (218)
.++.+|||+|||+|.++..++.. + .+++++|+++.+++.++.+. ..+...|+.+. ..++++++||+|++.
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~-~~~~~~D~~~~~~~~~~~~~------~~~~~~d~~~~--~~~~~~~~fD~v~~~ 100 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN-G-TRVSGIEAFPEAAEQAKEKL------DHVVLGDIETM--DMPYEEEQFDCVIFG 100 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT-T-CEEEEEESSHHHHHHHHTTS------SEEEESCTTTC--CCCSCTTCEEEEEEE
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc-C-CeEEEEeCCHHHHHHHHHhC------CcEEEcchhhc--CCCCCCCccCEEEEC
Confidence 56789999999999999999887 3 69999999999999998764 26777887652 134556789999999
Q ss_pred hhhcCCCcchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 158 FVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 158 ~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
.+++|++ +...++..+.++|+|||.+++....
T Consensus 101 ~~l~~~~--~~~~~l~~~~~~L~~gG~l~~~~~~ 132 (230)
T 3cc8_A 101 DVLEHLF--DPWAVIEKVKPYIKQNGVILASIPN 132 (230)
T ss_dssp SCGGGSS--CHHHHHHHTGGGEEEEEEEEEEEEC
T ss_pred ChhhhcC--CHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 9999995 6679999999999999999997644
No 114
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.58 E-value=7.6e-15 Score=108.21 Aligned_cols=110 Identities=19% Similarity=0.189 Sum_probs=88.9
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC-CC--ceEEeccCCCcccccCCCCCcccE
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA-SK--MNVFPCDVTEDDILNQVPHNSVDI 153 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~-~~--i~~~~~d~~~~~~~~~~~~~~~D~ 153 (218)
..++.+|||+|||+|.++..++.. ..+++++|+++.+++.++.+....+ .+ +.+...|+.+ ..+.++||+
T Consensus 50 ~~~~~~vLdiG~G~G~~~~~~~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~-----~~~~~~~D~ 122 (194)
T 1dus_A 50 VDKDDDILDLGCGYGVIGIALADE--VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYE-----NVKDRKYNK 122 (194)
T ss_dssp CCTTCEEEEETCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTT-----TCTTSCEEE
T ss_pred cCCCCeEEEeCCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhc-----ccccCCceE
Confidence 347789999999999999999887 3699999999999999998765443 33 8999998866 223558999
Q ss_pred EEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCCCc
Q psy1107 154 ATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLHD 194 (218)
Q Consensus 154 i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~~~ 194 (218)
|++..++++. ......++..+.++|+|||.+++.......
T Consensus 123 v~~~~~~~~~-~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~ 162 (194)
T 1dus_A 123 IITNPPIRAG-KEVLHRIIEEGKELLKDNGEIWVVIQTKQG 162 (194)
T ss_dssp EEECCCSTTC-HHHHHHHHHHHHHHEEEEEEEEEEEESTHH
T ss_pred EEECCCcccc-hhHHHHHHHHHHHHcCCCCEEEEEECCCCC
Confidence 9997766542 356788999999999999999998866543
No 115
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.58 E-value=1.2e-14 Score=118.19 Aligned_cols=109 Identities=18% Similarity=0.144 Sum_probs=87.6
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC----CCceEEeccCCCcccccCCCCCcccE
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA----SKMNVFPCDVTEDDILNQVPHNSVDI 153 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~----~~i~~~~~d~~~~~~~~~~~~~~~D~ 153 (218)
.++.+|||+|||+|.++..++..+|..+|+++|+|+.+++.++.+....+ .++.+...|+.+ .++.++||+
T Consensus 221 ~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~-----~~~~~~fD~ 295 (375)
T 4dcm_A 221 NLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS-----GVEPFRFNA 295 (375)
T ss_dssp SCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT-----TCCTTCEEE
T ss_pred cCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc-----cCCCCCeeE
Confidence 34589999999999999999999888899999999999999998866543 257788898866 345668999
Q ss_pred EEechhhcC---CCcchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 154 ATLIFVLSA---IHPNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 154 i~~~~~l~~---~~~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
|++...+++ +.......++..+.++|+|||.+++....
T Consensus 296 Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~ 336 (375)
T 4dcm_A 296 VLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANR 336 (375)
T ss_dssp EEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEET
T ss_pred EEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEEC
Confidence 999877764 23345567899999999999999997643
No 116
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.58 E-value=3.9e-15 Score=111.61 Aligned_cols=103 Identities=14% Similarity=0.034 Sum_probs=84.5
Q ss_pred hhcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC-CCceEEeccCCCcccccCCCCCcccE
Q psy1107 75 NQDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA-SKMNVFPCDVTEDDILNQVPHNSVDI 153 (218)
Q Consensus 75 ~~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~~~~D~ 153 (218)
....++.+|||+|||+|.++..++..+ .+++++|+++.+++.++++....+ .++.+...|+.+. ....++||+
T Consensus 73 l~~~~~~~vLdiG~G~G~~~~~la~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~----~~~~~~~D~ 146 (210)
T 3lbf_A 73 LELTPQSRVLEIGTGSGYQTAILAHLV--QHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQG----WQARAPFDA 146 (210)
T ss_dssp TTCCTTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC----CGGGCCEEE
T ss_pred cCCCCCCEEEEEcCCCCHHHHHHHHhC--CEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccC----CccCCCccE
Confidence 345678899999999999999998874 599999999999999998765443 4789999998762 223468999
Q ss_pred EEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 154 ATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 154 i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
|++..+++++++ .+.++|+|||.+++....
T Consensus 147 i~~~~~~~~~~~--------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 147 IIVTAAPPEIPT--------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp EEESSBCSSCCT--------HHHHTEEEEEEEEEEECS
T ss_pred EEEccchhhhhH--------HHHHhcccCcEEEEEEcC
Confidence 999999888862 478899999999997654
No 117
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.57 E-value=1.4e-14 Score=112.39 Aligned_cols=114 Identities=14% Similarity=0.180 Sum_probs=88.0
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcc---cC--CCceEEeccCCCccc---ccCCC
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLY---DA--SKMNVFPCDVTEDDI---LNQVP 147 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~---~~--~~i~~~~~d~~~~~~---~~~~~ 147 (218)
...++.+|||+|||+|.++..++...|..+++++|+++.+++.|+++... .+ .++.+++.|+.+... ...++
T Consensus 33 ~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~ 112 (260)
T 2ozv_A 33 ADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLP 112 (260)
T ss_dssp CCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCC
T ss_pred cccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccC
Confidence 34567899999999999999999988878999999999999999998765 44 358999999977310 01345
Q ss_pred CCcccEEEechhhcC----------------CCcchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 148 HNSVDIATLIFVLSA----------------IHPNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 148 ~~~~D~i~~~~~l~~----------------~~~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
.++||+|+++-.+.. ........++..+.++|+|||.|++..
T Consensus 113 ~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 170 (260)
T 2ozv_A 113 DEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLIS 170 (260)
T ss_dssp TTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 678999999733221 112346788999999999999998865
No 118
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.57 E-value=2.4e-14 Score=107.67 Aligned_cols=92 Identities=21% Similarity=0.356 Sum_probs=76.1
Q ss_pred hhcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEE
Q psy1107 75 NQDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIA 154 (218)
Q Consensus 75 ~~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i 154 (218)
....++.+|||+|||+|.++..++ .+++++|+++. ++.+..+|+.+ .+++.++||+|
T Consensus 63 ~~~~~~~~vLDiG~G~G~~~~~l~-----~~v~~~D~s~~--------------~~~~~~~d~~~----~~~~~~~fD~v 119 (215)
T 2zfu_A 63 RQRPASLVVADFGCGDCRLASSIR-----NPVHCFDLASL--------------DPRVTVCDMAQ----VPLEDESVDVA 119 (215)
T ss_dssp HTSCTTSCEEEETCTTCHHHHHCC-----SCEEEEESSCS--------------STTEEESCTTS----CSCCTTCEEEE
T ss_pred hccCCCCeEEEECCcCCHHHHHhh-----ccEEEEeCCCC--------------CceEEEecccc----CCCCCCCEeEE
Confidence 444677899999999999988773 48999999886 46778888876 45666789999
Q ss_pred EechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCC
Q psy1107 155 TLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGL 192 (218)
Q Consensus 155 ~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~ 192 (218)
++..++++ .+...++..+.++|+|||.+++.++..
T Consensus 120 ~~~~~l~~---~~~~~~l~~~~~~L~~gG~l~i~~~~~ 154 (215)
T 2zfu_A 120 VFCLSLMG---TNIRDFLEEANRVLKPGGLLKVAEVSS 154 (215)
T ss_dssp EEESCCCS---SCHHHHHHHHHHHEEEEEEEEEEECGG
T ss_pred EEehhccc---cCHHHHHHHHHHhCCCCeEEEEEEcCC
Confidence 99998863 478899999999999999999987654
No 119
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.57 E-value=1.2e-14 Score=118.16 Aligned_cols=104 Identities=17% Similarity=0.232 Sum_probs=88.3
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEe
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATL 156 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~ 156 (218)
..+..+|||||||+|.++..+++.+|..+++++|+ +.+++.++.. .++.+..+|+.+ +++.+ |+|++
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~~v~~~~~d~~~-----~~p~~--D~v~~ 267 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAF-----SGVEHLGGDMFD-----GVPKG--DAIFI 267 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-----TTEEEEECCTTT-----CCCCC--SEEEE
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhc-----CCCEEEecCCCC-----CCCCC--CEEEE
Confidence 34568999999999999999999999899999999 8887766543 579999999875 23433 99999
Q ss_pred chhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCCC
Q psy1107 157 IFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLH 193 (218)
Q Consensus 157 ~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~~ 193 (218)
..++|++++++...++++++++|+|||.|++.+....
T Consensus 268 ~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 304 (368)
T 3reo_A 268 KWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILP 304 (368)
T ss_dssp ESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCC
T ss_pred echhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 9999999877788999999999999999999886543
No 120
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.57 E-value=7.4e-15 Score=118.97 Aligned_cols=108 Identities=19% Similarity=0.244 Sum_probs=91.7
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccCCCCCcccEE
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQVPHNSVDIA 154 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~~D~i 154 (218)
..++.+|||+|||+|.++..++..+|..+++++|+ +.+++.++++....+ .++.+..+|+.+ .++. .||+|
T Consensus 181 ~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-----~~~~-~~D~v 253 (360)
T 1tw3_A 181 WTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-----PLPR-KADAI 253 (360)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-----CCSS-CEEEE
T ss_pred CccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-----CCCC-CccEE
Confidence 45678999999999999999999888889999999 999999988754433 479999999865 2333 49999
Q ss_pred EechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 155 TLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 155 ~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
++..+++++++.+...+++++.++|+|||.+++.+..
T Consensus 254 ~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 254 ILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 9999999997666678999999999999999998866
No 121
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.57 E-value=1.9e-14 Score=116.77 Aligned_cols=105 Identities=20% Similarity=0.251 Sum_probs=89.0
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEe
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATL 156 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~ 156 (218)
..+..+|||||||+|.++..+++.+|..+++++|+ +.+++.++.. .++.+..+|+.+ +++.+ |+|++
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~~v~~~~~D~~~-----~~p~~--D~v~~ 265 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQF-----PGVTHVGGDMFK-----EVPSG--DTILM 265 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-----TTEEEEECCTTT-----CCCCC--SEEEE
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhc-----CCeEEEeCCcCC-----CCCCC--CEEEe
Confidence 45678999999999999999999999899999999 8877666542 579999999875 23333 99999
Q ss_pred chhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCCCc
Q psy1107 157 IFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLHD 194 (218)
Q Consensus 157 ~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~~~ 194 (218)
..++|++++++...+++++++.|+|||.|++.+....+
T Consensus 266 ~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~ 303 (364)
T 3p9c_A 266 KWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPV 303 (364)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCS
T ss_pred hHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 99999998778889999999999999999998865443
No 122
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.57 E-value=2.7e-14 Score=115.44 Aligned_cols=110 Identities=23% Similarity=0.272 Sum_probs=93.2
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC-CCceEEeccCCCcccccCCCCCcccEEE
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA-SKMNVFPCDVTEDDILNQVPHNSVDIAT 155 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~~~~D~i~ 155 (218)
..+..+|||||||+|.++..+++.+|..+++..|. +.+++.+++...... .++.+..+|+.. .+.+ .+|+++
T Consensus 177 ~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~----~~~~--~~D~~~ 249 (353)
T 4a6d_A 177 LSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFK----DPLP--EADLYI 249 (353)
T ss_dssp GGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTT----SCCC--CCSEEE
T ss_pred cccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcccCceeeecCcccc----CCCC--CceEEE
Confidence 34567999999999999999999999999999997 888999987755433 689999999876 2333 579999
Q ss_pred echhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCCC
Q psy1107 156 LIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLH 193 (218)
Q Consensus 156 ~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~~ 193 (218)
+..++|++++++...+++++++.|+|||.|++.+....
T Consensus 250 ~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~ 287 (353)
T 4a6d_A 250 LARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLD 287 (353)
T ss_dssp EESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCC
T ss_pred eeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeC
Confidence 99999999877888999999999999999999986543
No 123
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.56 E-value=6.5e-15 Score=109.88 Aligned_cols=109 Identities=17% Similarity=0.093 Sum_probs=84.2
Q ss_pred CCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC---CCceEEeccCCCcccccCCCCCc-ccEE
Q psy1107 79 GEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA---SKMNVFPCDVTEDDILNQVPHNS-VDIA 154 (218)
Q Consensus 79 ~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~---~~i~~~~~d~~~~~~~~~~~~~~-~D~i 154 (218)
++.+|||+|||+|.++..++..+. .+|+++|+|+.+++.|+.++...+ .++.+++.|+.+. ....+.++ ||+|
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~~~~fD~I 129 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQA-KKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDF--LKQPQNQPHFDVV 129 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHH--TTSCCSSCCEEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHccC-CEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHH--HHhhccCCCCCEE
Confidence 568999999999999998776654 489999999999999998865544 4789999987652 11223458 9999
Q ss_pred EechhhcCCCcchHHHHHHHH--HHhccCCeEEEEEecCCC
Q psy1107 155 TLIFVLSAIHPNKFSTVVKNL--FIMLKSGGIILFRDYGLH 193 (218)
Q Consensus 155 ~~~~~l~~~~~~~~~~~l~~~--~~~Lk~gG~li~~~~~~~ 193 (218)
++...++ . .....++..+ .++|+|||.+++......
T Consensus 130 ~~~~~~~-~--~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 130 FLDPPFH-F--NLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp EECCCSS-S--CHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred EECCCCC-C--ccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 9876643 2 4677788888 668999999998765433
No 124
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.56 E-value=5.8e-15 Score=111.06 Aligned_cols=105 Identities=16% Similarity=0.009 Sum_probs=84.5
Q ss_pred hhcCCCcEEEEecCCCchhHHHHhhcC-CccEEEEEeCCHHHHHHHHhCCcccC-CCceEEeccCCCcccccCCC-CCcc
Q psy1107 75 NQDVGEGVLLEVGCGVGNFIFPLLSWS-KICYIHACDISPRAVNFFKLNPLYDA-SKMNVFPCDVTEDDILNQVP-HNSV 151 (218)
Q Consensus 75 ~~~~~~~~vLDiGcG~G~~~~~~~~~~-~~~~v~~~D~s~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~-~~~~ 151 (218)
....++.+|||+|||+|.++..++... +..+++++|+++.+++.++++....+ .++.+...|+.. .++ .++|
T Consensus 73 ~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~-----~~~~~~~f 147 (215)
T 2yxe_A 73 LDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTL-----GYEPLAPY 147 (215)
T ss_dssp TTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGG-----CCGGGCCE
T ss_pred hCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCccc-----CCCCCCCe
Confidence 345677899999999999999998875 55699999999999999998755433 468888888743 222 4579
Q ss_pred cEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCC
Q psy1107 152 DIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGL 192 (218)
Q Consensus 152 D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~ 192 (218)
|+|++..++++++ ..+.++|+|||.+++.....
T Consensus 148 D~v~~~~~~~~~~--------~~~~~~L~pgG~lv~~~~~~ 180 (215)
T 2yxe_A 148 DRIYTTAAGPKIP--------EPLIRQLKDGGKLLMPVGRY 180 (215)
T ss_dssp EEEEESSBBSSCC--------HHHHHTEEEEEEEEEEESSS
T ss_pred eEEEECCchHHHH--------HHHHHHcCCCcEEEEEECCC
Confidence 9999999998885 37889999999999977543
No 125
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.56 E-value=9.9e-15 Score=111.29 Aligned_cols=106 Identities=13% Similarity=0.149 Sum_probs=85.8
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccC-CCCCccc
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQ-VPHNSVD 152 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~-~~~~~~D 152 (218)
...++.+|||+|||+|..+..++...+..+++++|+++.+++.|++++...+ .++.++.+|+.+. .+ ...++||
T Consensus 68 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~~~~~fD 144 (232)
T 3ntv_A 68 RMNNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQ---FENVNDKVYD 144 (232)
T ss_dssp HHHTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGC---HHHHTTSCEE
T ss_pred hhcCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHH---HHhhccCCcc
Confidence 3456789999999999999999987777899999999999999998865544 4799999998762 11 1146899
Q ss_pred EEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 153 IATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 153 ~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
+|++... ......+++.+.++|+|||+|++.+
T Consensus 145 ~V~~~~~-----~~~~~~~l~~~~~~LkpgG~lv~d~ 176 (232)
T 3ntv_A 145 MIFIDAA-----KAQSKKFFEIYTPLLKHQGLVITDN 176 (232)
T ss_dssp EEEEETT-----SSSHHHHHHHHGGGEEEEEEEEEEC
T ss_pred EEEEcCc-----HHHHHHHHHHHHHhcCCCeEEEEee
Confidence 9997532 2467789999999999999998844
No 126
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.55 E-value=3.4e-14 Score=107.79 Aligned_cols=106 Identities=16% Similarity=0.109 Sum_probs=82.3
Q ss_pred cCCCcEEEEecCCCchhHHHHhhc-CCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEE
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSW-SKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIAT 155 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~-~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~ 155 (218)
..++.+|||+|||+|.++..++.. ++..+++++|+++.+++.+++++... .++.++..|+.+.......+ ++||+|+
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~-~~~D~v~ 148 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER-RNIVPILGDATKPEEYRALV-PKVDVIF 148 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC-TTEEEEECCTTCGGGGTTTC-CCEEEEE
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc-CCCEEEEccCCCcchhhccc-CCceEEE
Confidence 456789999999999999999876 45569999999999998888765544 68999999987643212233 4899999
Q ss_pred echhhcCCCcchHHHHHHHHHHhccCCeEEEEE
Q psy1107 156 LIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFR 188 (218)
Q Consensus 156 ~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~ 188 (218)
+... .++....++..+.++|+|||.+++.
T Consensus 149 ~~~~----~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 149 EDVA----QPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp ECCC----STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ECCC----CHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 7533 2234455699999999999999987
No 127
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.55 E-value=1.2e-14 Score=117.78 Aligned_cols=115 Identities=10% Similarity=0.125 Sum_probs=86.6
Q ss_pred hhcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCc-------cc---CCCceEEeccCCCccccc
Q psy1107 75 NQDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPL-------YD---ASKMNVFPCDVTEDDILN 144 (218)
Q Consensus 75 ~~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~-------~~---~~~i~~~~~d~~~~~~~~ 144 (218)
....++.+|||||||+|..++.++...+..+++|+|+++.+++.|+.+.. .. ..++.|+++|+.+..+..
T Consensus 169 l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp~~d 248 (438)
T 3uwp_A 169 IKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRE 248 (438)
T ss_dssp HCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHHHHH
T ss_pred cCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCcccc
Confidence 34567889999999999999999876554469999999999999986431 11 257999999998743211
Q ss_pred CCCCCcccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCCCc
Q psy1107 145 QVPHNSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLHD 194 (218)
Q Consensus 145 ~~~~~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~~~ 194 (218)
.+ ..+|+|+++.++ +. .+....+.++++.|||||.|++.+....+
T Consensus 249 ~~--~~aDVVf~Nn~~--F~-pdl~~aL~Ei~RvLKPGGrIVssE~f~p~ 293 (438)
T 3uwp_A 249 RI--ANTSVIFVNNFA--FG-PEVDHQLKERFANMKEGGRIVSSKPFAPL 293 (438)
T ss_dssp HH--HTCSEEEECCTT--CC-HHHHHHHHHHHTTSCTTCEEEESSCSSCT
T ss_pred cc--CCccEEEEcccc--cC-chHHHHHHHHHHcCCCCcEEEEeecccCC
Confidence 11 268999987654 22 46777888999999999999998744443
No 128
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.54 E-value=2.4e-14 Score=110.26 Aligned_cols=109 Identities=7% Similarity=-0.012 Sum_probs=86.2
Q ss_pred hhcCCCcEEEEecCCCchhHHHHhhcCC-ccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccCC-CCCc
Q psy1107 75 NQDVGEGVLLEVGCGVGNFIFPLLSWSK-ICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQV-PHNS 150 (218)
Q Consensus 75 ~~~~~~~~vLDiGcG~G~~~~~~~~~~~-~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~-~~~~ 150 (218)
....++.+|||+|||+|..+..++...+ ..+++++|+++.+++.+++++...+ .++.+..+|+.+.. ... ..++
T Consensus 59 ~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l--~~~~~~~~ 136 (248)
T 3tfw_A 59 VRLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSL--ESLGECPA 136 (248)
T ss_dssp HHHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHH--HTCCSCCC
T ss_pred HhhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHH--HhcCCCCC
Confidence 3445778999999999999999998866 6799999999999999998865443 47999999886521 122 2348
Q ss_pred ccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEec
Q psy1107 151 VDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 151 ~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~ 190 (218)
||+|++.. +......+++.+.++|+|||+|++.+.
T Consensus 137 fD~V~~d~-----~~~~~~~~l~~~~~~LkpGG~lv~~~~ 171 (248)
T 3tfw_A 137 FDLIFIDA-----DKPNNPHYLRWALRYSRPGTLIIGDNV 171 (248)
T ss_dssp CSEEEECS-----CGGGHHHHHHHHHHTCCTTCEEEEECC
T ss_pred eEEEEECC-----chHHHHHHHHHHHHhcCCCeEEEEeCC
Confidence 99999853 234667899999999999999988653
No 129
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.54 E-value=8.7e-15 Score=110.38 Aligned_cols=106 Identities=11% Similarity=0.104 Sum_probs=78.9
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHH----HHhCCcccC-CCceEEeccCCCcccccCCCCCcc
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNF----FKLNPLYDA-SKMNVFPCDVTEDDILNQVPHNSV 151 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~----~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~~~~ 151 (218)
..++.+|||+|||+|.++..++..+|..+|+++|+|+.+++. ++++....+ .++.+.++|+.+ .+++.+.
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~----l~~~~~~- 99 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAER----LPPLSGV- 99 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTT----CCSCCCE-
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhh----CCCCCCC-
Confidence 457789999999999999999999888899999999998775 333332222 489999999987 3444444
Q ss_pred cEEEec---hhhc--CCCcchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 152 DIATLI---FVLS--AIHPNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 152 D~i~~~---~~l~--~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
|.|++. ...+ |++ +...++.++.++|||||.+++..
T Consensus 100 d~v~~~~~~~~~~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 100 GELHVLMPWGSLLRGVLG--SSPEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp EEEEEESCCHHHHHHHHT--SSSHHHHHHHHTEEEEEEEEEEE
T ss_pred CEEEEEccchhhhhhhhc--cHHHHHHHHHHHcCCCcEEEEEe
Confidence 665532 2221 332 34689999999999999999843
No 130
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.54 E-value=2.8e-14 Score=110.53 Aligned_cols=112 Identities=19% Similarity=0.246 Sum_probs=86.8
Q ss_pred hhcC-CCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccCCCCCcc
Q psy1107 75 NQDV-GEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQVPHNSV 151 (218)
Q Consensus 75 ~~~~-~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~~ 151 (218)
.... ++.+|||+|||+|.++..++..++. +++++|+++.+++.|++++...+ .++.+++.|+.+.. ..++.++|
T Consensus 44 ~~~~~~~~~vLDlG~G~G~~~~~la~~~~~-~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~--~~~~~~~f 120 (259)
T 3lpm_A 44 SYLPIRKGKIIDLCSGNGIIPLLLSTRTKA-KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKIT--DLIPKERA 120 (259)
T ss_dssp CCCCSSCCEEEETTCTTTHHHHHHHTTCCC-EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGG--GTSCTTCE
T ss_pred hcCCCCCCEEEEcCCchhHHHHHHHHhcCC-cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhh--hhhccCCc
Confidence 3445 6789999999999999999988764 99999999999999999866544 36999999987732 23556799
Q ss_pred cEEEechhhcCC------------------CcchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 152 DIATLIFVLSAI------------------HPNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 152 D~i~~~~~l~~~------------------~~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
|+|+++..+... .......++..+.++|+|||.+++..
T Consensus 121 D~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 176 (259)
T 3lpm_A 121 DIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVH 176 (259)
T ss_dssp EEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEE
Confidence 999996443221 01235679999999999999999865
No 131
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.54 E-value=4.4e-15 Score=119.61 Aligned_cols=108 Identities=20% Similarity=0.261 Sum_probs=88.7
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEec
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATLI 157 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~~ 157 (218)
.++.+|||+|||+|.++..++..+|..+++++|+|+.+++.++.+....+.+..+...|+.. ...++||+|++.
T Consensus 195 ~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~------~~~~~fD~Iv~~ 268 (343)
T 2pjd_A 195 HTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFS------EVKGRFDMIISN 268 (343)
T ss_dssp TCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTT------TCCSCEEEEEEC
T ss_pred CCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccc------cccCCeeEEEEC
Confidence 35679999999999999999998887899999999999999998866555556777888754 124589999998
Q ss_pred hhhcCC---CcchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 158 FVLSAI---HPNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 158 ~~l~~~---~~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
.++++. ..+....++..+.++|+|||.+++....
T Consensus 269 ~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 305 (343)
T 2pjd_A 269 PPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANA 305 (343)
T ss_dssp CCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEET
T ss_pred CCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcC
Confidence 887752 2346788999999999999999997644
No 132
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.54 E-value=2.3e-14 Score=110.69 Aligned_cols=116 Identities=14% Similarity=0.188 Sum_probs=87.6
Q ss_pred CCCcEEEEecCCC--chhHHHHhh-cCCccEEEEEeCCHHHHHHHHhCCcccC-CCceEEeccCCCcccccCCC--CCcc
Q psy1107 78 VGEGVLLEVGCGV--GNFIFPLLS-WSKICYIHACDISPRAVNFFKLNPLYDA-SKMNVFPCDVTEDDILNQVP--HNSV 151 (218)
Q Consensus 78 ~~~~~vLDiGcG~--G~~~~~~~~-~~~~~~v~~~D~s~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~--~~~~ 151 (218)
....+|||||||. +..+..++. ..|.++|+++|.|+.+++.++.+....+ .++.|++.|+.+.......+ ...|
T Consensus 77 ~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~ 156 (277)
T 3giw_A 77 AGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTL 156 (277)
T ss_dssp SCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTC
T ss_pred cCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhccccccccc
Confidence 3557999999997 555566654 4678899999999999999998755433 47999999998742111101 1234
Q ss_pred c-----EEEechhhcCCCcch-HHHHHHHHHHhccCCeEEEEEecCCC
Q psy1107 152 D-----IATLIFVLSAIHPNK-FSTVVKNLFIMLKSGGIILFRDYGLH 193 (218)
Q Consensus 152 D-----~i~~~~~l~~~~~~~-~~~~l~~~~~~Lk~gG~li~~~~~~~ 193 (218)
| .|++..++||+++.+ +..++..+.+.|+|||+|++.+....
T Consensus 157 D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d 204 (277)
T 3giw_A 157 DLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAE 204 (277)
T ss_dssp CTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCT
T ss_pred CcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCC
Confidence 4 588889999998644 68899999999999999999886654
No 133
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.54 E-value=2e-14 Score=113.22 Aligned_cols=109 Identities=14% Similarity=0.118 Sum_probs=81.5
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCccc------CCCceEEeccCCCcccccCCCCCcc
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYD------ASKMNVFPCDVTEDDILNQVPHNSV 151 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~------~~~i~~~~~d~~~~~~~~~~~~~~~ 151 (218)
.++.+|||||||+|..+..+++..+..+++++|+++.+++.|++++... ..++.++..|+... .....++|
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~---l~~~~~~f 158 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNF---VNQTSQTF 158 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC------CCCCCE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHH---HhhcCCCc
Confidence 4578999999999999999998766679999999999999999886532 35899999998762 22245689
Q ss_pred cEEEechhhcCCCcchH--HHHHHHHHHhccCCeEEEEEe
Q psy1107 152 DIATLIFVLSAIHPNKF--STVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 152 D~i~~~~~l~~~~~~~~--~~~l~~~~~~Lk~gG~li~~~ 189 (218)
|+|++.......++... ..+++.+.+.|+|||.+++..
T Consensus 159 DvIi~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 159 DVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp EEEEECC----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred cEEEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 99999543222221222 678999999999999999865
No 134
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.54 E-value=2.1e-14 Score=115.88 Aligned_cols=105 Identities=17% Similarity=0.174 Sum_probs=84.8
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccCCCCCcccEE
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQVPHNSVDIA 154 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~~D~i 154 (218)
..++.+|||+|||+|.++..+++.+ ..+|+|+|+| .+++.|+++....+ .++.++++|+.+ .+++.++||+|
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~g-~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~----~~~~~~~fD~I 137 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKAG-ARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEE----VELPVEKVDII 137 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHTT-CSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTT----CCCSSSCEEEE
T ss_pred cCCCCEEEEEeccchHHHHHHHHCC-CCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHH----ccCCCCceEEE
Confidence 4577899999999999999999874 3599999999 49999988765443 359999999987 35666799999
Q ss_pred EechhhcCCC-cchHHHHHHHHHHhccCCeEEEE
Q psy1107 155 TLIFVLSAIH-PNKFSTVVKNLFIMLKSGGIILF 187 (218)
Q Consensus 155 ~~~~~l~~~~-~~~~~~~l~~~~~~Lk~gG~li~ 187 (218)
++..+.+++. ......++..+.++|||||.++.
T Consensus 138 is~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 138 ISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp EECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred EEccccccccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 9976544442 35788899999999999999874
No 135
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.54 E-value=7.9e-15 Score=107.01 Aligned_cols=111 Identities=10% Similarity=0.108 Sum_probs=83.4
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccCCCCCcccEE
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQVPHNSVDIA 154 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~~D~i 154 (218)
..++.+|||+|||+|.++..++.. +..+++++|+++.+++.++.+....+ .++.++..|+.+. .+...++||+|
T Consensus 29 ~~~~~~vLDlGcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~fD~i 104 (177)
T 2esr_A 29 YFNGGRVLDLFAGSGGLAIEAVSR-GMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERA---IDCLTGRFDLV 104 (177)
T ss_dssp CCCSCEEEEETCTTCHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHH---HHHBCSCEEEE
T ss_pred hcCCCeEEEeCCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHh---HHhhcCCCCEE
Confidence 456789999999999999999877 34599999999999999998865544 3688998887652 11123469999
Q ss_pred EechhhcCCCcchHHHHHHHHH--HhccCCeEEEEEecCCCc
Q psy1107 155 TLIFVLSAIHPNKFSTVVKNLF--IMLKSGGIILFRDYGLHD 194 (218)
Q Consensus 155 ~~~~~l~~~~~~~~~~~l~~~~--~~Lk~gG~li~~~~~~~~ 194 (218)
++..+++. .....++..+. ++|+|||.+++.......
T Consensus 105 ~~~~~~~~---~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~~ 143 (177)
T 2esr_A 105 FLDPPYAK---ETIVATIEALAAKNLLSEQVMVVCETDKTVL 143 (177)
T ss_dssp EECCSSHH---HHHHHHHHHHHHTTCEEEEEEEEEEEETTCC
T ss_pred EECCCCCc---chHHHHHHHHHhCCCcCCCcEEEEEECCccc
Confidence 98654321 34556677776 999999999997755443
No 136
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.54 E-value=2.2e-14 Score=107.09 Aligned_cols=106 Identities=15% Similarity=0.171 Sum_probs=85.3
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC-CCceEEeccCCCcccccCCCCCcccEEE
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA-SKMNVFPCDVTEDDILNQVPHNSVDIAT 155 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~~~~D~i~ 155 (218)
..++.+|||+|||+|.++..++.. +..+++++|+++.+++.++++....+ .++.+...|+.+. ..++||+|+
T Consensus 58 ~~~~~~vLDiG~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~------~~~~fD~i~ 130 (205)
T 3grz_A 58 MVKPLTVADVGTGSGILAIAAHKL-GAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLAD------VDGKFDLIV 130 (205)
T ss_dssp CSSCCEEEEETCTTSHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTT------CCSCEEEEE
T ss_pred ccCCCEEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEecccccc------CCCCceEEE
Confidence 457789999999999999998875 34599999999999999998865444 3489999998651 246899999
Q ss_pred echhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCCCc
Q psy1107 156 LIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLHD 194 (218)
Q Consensus 156 ~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~~~ 194 (218)
+..+++ ....+++.+.++|+|||.+++.++....
T Consensus 131 ~~~~~~-----~~~~~l~~~~~~L~~gG~l~~~~~~~~~ 164 (205)
T 3grz_A 131 ANILAE-----ILLDLIPQLDSHLNEDGQVIFSGIDYLQ 164 (205)
T ss_dssp EESCHH-----HHHHHGGGSGGGEEEEEEEEEEEEEGGG
T ss_pred ECCcHH-----HHHHHHHHHHHhcCCCCEEEEEecCccc
Confidence 976554 3568899999999999999997655444
No 137
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.53 E-value=3.5e-14 Score=109.16 Aligned_cols=111 Identities=15% Similarity=0.218 Sum_probs=83.1
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCccc--------C-CCceEEeccCCCcccccCCCC
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYD--------A-SKMNVFPCDVTEDDILNQVPH 148 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~--------~-~~i~~~~~d~~~~~~~~~~~~ 148 (218)
.++.+|||+|||+|.++..++..+|...++|+|+|+.+++.+++++... + .++.++.+|+.+. +...++.
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~-l~~~~~~ 126 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKF-LPNFFEK 126 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSC-GGGTSCT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHH-HHHhccc
Confidence 4678999999999999999999888789999999999999998764432 2 5799999998762 1123566
Q ss_pred CcccEEEechhhcCCCc------chHHHHHHHHHHhccCCeEEEEEe
Q psy1107 149 NSVDIATLIFVLSAIHP------NKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 149 ~~~D~i~~~~~l~~~~~------~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
+++|.|++.+.-.+... .....++..+.++|+|||.|++..
T Consensus 127 ~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 127 GQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp TCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEe
Confidence 78999986432111000 001478999999999999999864
No 138
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.53 E-value=2.5e-14 Score=116.45 Aligned_cols=102 Identities=20% Similarity=0.188 Sum_probs=86.2
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEe
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATL 156 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~ 156 (218)
..+..+|||+|||+|.++..+++.+|..+++++|+ +.+++.++.. .++.+..+|+.+ +++. ||+|++
T Consensus 207 ~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-----~~v~~~~~d~~~-----~~~~--~D~v~~ 273 (372)
T 1fp1_D 207 FEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPL-----SGIEHVGGDMFA-----SVPQ--GDAMIL 273 (372)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-----TTEEEEECCTTT-----CCCC--EEEEEE
T ss_pred cCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhc-----CCCEEEeCCccc-----CCCC--CCEEEE
Confidence 34678999999999999999999998889999999 8888776542 468999999865 2333 999999
Q ss_pred chhhcCCCcchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 157 IFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 157 ~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
..+++++++.....++++++++|+|||.|++.++.
T Consensus 274 ~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~ 308 (372)
T 1fp1_D 274 KAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFI 308 (372)
T ss_dssp ESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred ecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence 99999997555669999999999999999998754
No 139
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.53 E-value=1.9e-14 Score=110.81 Aligned_cols=113 Identities=17% Similarity=0.233 Sum_probs=83.4
Q ss_pred CCcEEEEecCCCchhHHHHhhc--CCccEEEEEeCCHHHHHHHHhCCccc---C--CC----------------------
Q psy1107 79 GEGVLLEVGCGVGNFIFPLLSW--SKICYIHACDISPRAVNFFKLNPLYD---A--SK---------------------- 129 (218)
Q Consensus 79 ~~~~vLDiGcG~G~~~~~~~~~--~~~~~v~~~D~s~~~~~~~~~~~~~~---~--~~---------------------- 129 (218)
++.+|||+|||+|.++..++.. .+..+++|+|+|+.+++.|+.+.... + .+
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQA 130 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhh
Confidence 5679999999999999999877 55679999999999999999764432 1 11
Q ss_pred ---ce-------------EEeccCCCcccccCC-CCCcccEEEechhhcCCCc-------chHHHHHHHHHHhccCCeEE
Q psy1107 130 ---MN-------------VFPCDVTEDDILNQV-PHNSVDIATLIFVLSAIHP-------NKFSTVVKNLFIMLKSGGII 185 (218)
Q Consensus 130 ---i~-------------~~~~d~~~~~~~~~~-~~~~~D~i~~~~~l~~~~~-------~~~~~~l~~~~~~Lk~gG~l 185 (218)
+. +.+.|+.+....... ...+||+|++..++.+... +....++..+.++|+|||.+
T Consensus 131 ~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l 210 (250)
T 1o9g_A 131 ARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVI 210 (250)
T ss_dssp HHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEE
T ss_pred hhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEE
Confidence 56 888988662100000 2347999999765544431 45668999999999999999
Q ss_pred EEEecC
Q psy1107 186 LFRDYG 191 (218)
Q Consensus 186 i~~~~~ 191 (218)
++.+..
T Consensus 211 ~~~~~~ 216 (250)
T 1o9g_A 211 AVTDRS 216 (250)
T ss_dssp EEEESS
T ss_pred EEeCcc
Confidence 996543
No 140
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.53 E-value=5.8e-14 Score=101.98 Aligned_cols=99 Identities=14% Similarity=0.161 Sum_probs=78.7
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEec
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATLI 157 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~~ 157 (218)
.++.+|||+|||+|.++..++..+ +++++|+|+.+++. ..++.+.++|+.+ +++.++||+|+++
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~---~v~gvD~s~~~~~~--------~~~~~~~~~d~~~-----~~~~~~fD~i~~n 85 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN---TVVSTDLNIRALES--------HRGGNLVRADLLC-----SINQESVDVVVFN 85 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS---EEEEEESCHHHHHT--------CSSSCEEECSTTT-----TBCGGGCSEEEEC
T ss_pred CCCCeEEEeccCccHHHHHHHhcC---cEEEEECCHHHHhc--------ccCCeEEECChhh-----hcccCCCCEEEEC
Confidence 466799999999999999998876 99999999999887 2468899999876 2333689999998
Q ss_pred hhhcCCCcc-------hHHHHHHHHHHhccCCeEEEEEecCCC
Q psy1107 158 FVLSAIHPN-------KFSTVVKNLFIMLKSGGIILFRDYGLH 193 (218)
Q Consensus 158 ~~l~~~~~~-------~~~~~l~~~~~~Lk~gG~li~~~~~~~ 193 (218)
..+++.++. +...++..+.+.+ |||.+++......
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~~ 127 (170)
T 3q87_B 86 PPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEAN 127 (170)
T ss_dssp CCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGGG
T ss_pred CCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecCC
Confidence 777655422 3456788888888 9999999775433
No 141
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.53 E-value=3.3e-14 Score=114.85 Aligned_cols=104 Identities=15% Similarity=0.164 Sum_probs=87.1
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEe
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATL 156 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~ 156 (218)
..+..+|||+|||+|..+..+++.+|..+++++|+ +.+++.++.. .++.+..+|+.+ +++ .||+|++
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~~v~~~~~d~~~-----~~p--~~D~v~~ 252 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS-----NNLTYVGGDMFT-----SIP--NADAVLL 252 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB-----TTEEEEECCTTT-----CCC--CCSEEEE
T ss_pred cccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC-----CCcEEEeccccC-----CCC--CccEEEe
Confidence 34668999999999999999999888889999999 9888776642 358999999865 223 3999999
Q ss_pred chhhcCCCcchHHHHHHHHHHhccC---CeEEEEEecCCC
Q psy1107 157 IFVLSAIHPNKFSTVVKNLFIMLKS---GGIILFRDYGLH 193 (218)
Q Consensus 157 ~~~l~~~~~~~~~~~l~~~~~~Lk~---gG~li~~~~~~~ 193 (218)
..+++++++.....++++++++|+| ||.|++.+....
T Consensus 253 ~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~ 292 (352)
T 1fp2_A 253 KYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVID 292 (352)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEEC
T ss_pred ehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecC
Confidence 9999999755566999999999999 999999886543
No 142
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.53 E-value=9.8e-15 Score=107.26 Aligned_cols=112 Identities=13% Similarity=0.086 Sum_probs=83.1
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccCCCCCcccEEE
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQVPHNSVDIAT 155 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~~D~i~ 155 (218)
.++.+|||+|||+|.++..++..+ ..+++++|+++.+++.++.+....+ .++.++++|+.+.....+...++||+|+
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~ 121 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSRG-MDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVL 121 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCCEEEeCCccCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEE
Confidence 467899999999999999887753 3599999999999999998865544 4689999988662110111245899999
Q ss_pred echhhcCCCcchHHHHHHHH--HHhccCCeEEEEEecCCC
Q psy1107 156 LIFVLSAIHPNKFSTVVKNL--FIMLKSGGIILFRDYGLH 193 (218)
Q Consensus 156 ~~~~l~~~~~~~~~~~l~~~--~~~Lk~gG~li~~~~~~~ 193 (218)
+..+++. ......+..+ .++|+|||.+++......
T Consensus 122 ~~~~~~~---~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 158 (187)
T 2fhp_A 122 LDPPYAK---QEIVSQLEKMLERQLLTNEAVIVCETDKTV 158 (187)
T ss_dssp ECCCGGG---CCHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred ECCCCCc---hhHHHHHHHHHHhcccCCCCEEEEEeCCcc
Confidence 9766442 2445566666 888999999998764433
No 143
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.53 E-value=2.3e-14 Score=108.50 Aligned_cols=102 Identities=12% Similarity=0.119 Sum_probs=81.6
Q ss_pred cEEEEecCCCchhHHHHhhcC-CccEEEEEeCCHHHHHHHHhCCcccC---CCceEEeccCCCcccccCCCCCcccEEEe
Q psy1107 81 GVLLEVGCGVGNFIFPLLSWS-KICYIHACDISPRAVNFFKLNPLYDA---SKMNVFPCDVTEDDILNQVPHNSVDIATL 156 (218)
Q Consensus 81 ~~vLDiGcG~G~~~~~~~~~~-~~~~v~~~D~s~~~~~~~~~~~~~~~---~~i~~~~~d~~~~~~~~~~~~~~~D~i~~ 156 (218)
.+|||+|||+|..+..++... +..+++++|+++.+++.|++++...+ .++.++++|+.+. ...++.++||+|++
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~--l~~~~~~~fD~V~~ 135 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDV--MSRLANDSYQLVFG 135 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHH--GGGSCTTCEEEEEE
T ss_pred CCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHH--HHHhcCCCcCeEEE
Confidence 499999999999999999864 36799999999999999998865543 3699999887652 12343568999997
Q ss_pred chhhcCCCcchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 157 IFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 157 ~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
... ......+++.+.++|+|||.+++.+
T Consensus 136 d~~-----~~~~~~~l~~~~~~LkpGG~lv~dn 163 (221)
T 3dr5_A 136 QVS-----PMDLKALVDAAWPLLRRGGALVLAD 163 (221)
T ss_dssp CCC-----TTTHHHHHHHHHHHEEEEEEEEETT
T ss_pred cCc-----HHHHHHHHHHHHHHcCCCcEEEEeC
Confidence 532 2456779999999999999999844
No 144
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.52 E-value=5.2e-15 Score=107.14 Aligned_cols=111 Identities=14% Similarity=0.103 Sum_probs=81.8
Q ss_pred CCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEech
Q psy1107 79 GEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATLIF 158 (218)
Q Consensus 79 ~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~~~ 158 (218)
++.+|||+|||+|.++..++..++ .++++|+|+.+++.++.+....+.++.+.+.|+.+..........+||+|++..
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~--~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~ 118 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGW--EAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAP 118 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTC--EEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECC
Confidence 678999999999999999998875 499999999999999987654434788888887652100111123799999986
Q ss_pred hhcCCCcchHHHHHHHHH--HhccCCeEEEEEecCCCch
Q psy1107 159 VLSAIHPNKFSTVVKNLF--IMLKSGGIILFRDYGLHDM 195 (218)
Q Consensus 159 ~l~~~~~~~~~~~l~~~~--~~Lk~gG~li~~~~~~~~~ 195 (218)
+++ . ....++..+. ++|+|||.+++........
T Consensus 119 ~~~-~---~~~~~~~~~~~~~~L~~gG~~~~~~~~~~~~ 153 (171)
T 1ws6_A 119 PYA-M---DLAALFGELLASGLVEAGGLYVLQHPKDLYL 153 (171)
T ss_dssp CTT-S---CTTHHHHHHHHHTCEEEEEEEEEEEETTSCC
T ss_pred CCc-h---hHHHHHHHHHhhcccCCCcEEEEEeCCccCC
Confidence 654 1 2334555555 9999999999977554443
No 145
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.52 E-value=3.5e-14 Score=107.03 Aligned_cols=112 Identities=12% Similarity=0.062 Sum_probs=88.7
Q ss_pred HHHHhhhcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccCCC
Q psy1107 70 FHEFVNQDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQVP 147 (218)
Q Consensus 70 ~~~~~~~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~ 147 (218)
+..+.....++.+|||+|||+|.+++.++..+|..+|+++|+++.+++.|+.++...+ .++.+..+|..+ +++
T Consensus 6 L~~l~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~-----~l~ 80 (225)
T 3kr9_A 6 LELVASFVSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLA-----AFE 80 (225)
T ss_dssp HHHHHTTSCTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGG-----GCC
T ss_pred HHHHHHhCCCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhh-----hcc
Confidence 3344445567889999999999999999998887899999999999999999977655 368999998855 333
Q ss_pred CC-cccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEec
Q psy1107 148 HN-SVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 148 ~~-~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~ 190 (218)
.+ +||+|+...+ .......++..+...|+++|.|++...
T Consensus 81 ~~~~~D~IviaG~----Gg~~i~~Il~~~~~~L~~~~~lVlq~~ 120 (225)
T 3kr9_A 81 ETDQVSVITIAGM----GGRLIARILEEGLGKLANVERLILQPN 120 (225)
T ss_dssp GGGCCCEEEEEEE----CHHHHHHHHHHTGGGCTTCCEEEEEES
T ss_pred cCcCCCEEEEcCC----ChHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 33 6998886433 213467889999999999999998664
No 146
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.52 E-value=1.9e-14 Score=109.16 Aligned_cols=94 Identities=17% Similarity=0.194 Sum_probs=78.6
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCC-CCcccEEE
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVP-HNSVDIAT 155 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~-~~~~D~i~ 155 (218)
..++.+|||+|||+|.++..++..+ .+++++|+|+.+++.++.+ ..++.++++|+.+. .+++ +++||+|+
T Consensus 46 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~----~~~~~~~~~d~~~~---~~~~~~~~fD~v~ 116 (226)
T 3m33_A 46 LTPQTRVLEAGCGHGPDAARFGPQA--ARWAAYDFSPELLKLARAN----APHADVYEWNGKGE---LPAGLGAPFGLIV 116 (226)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGGS--SEEEEEESCHHHHHHHHHH----CTTSEEEECCSCSS---CCTTCCCCEEEEE
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHh----CCCceEEEcchhhc---cCCcCCCCEEEEE
Confidence 4677899999999999999999874 5999999999999999987 34799999998642 4455 67999999
Q ss_pred echhhcCCCcchHHHHHHHHHHhccCCeEEEE
Q psy1107 156 LIFVLSAIHPNKFSTVVKNLFIMLKSGGIILF 187 (218)
Q Consensus 156 ~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~ 187 (218)
+. .+...++..+.++|||||.++.
T Consensus 117 ~~--------~~~~~~l~~~~~~LkpgG~l~~ 140 (226)
T 3m33_A 117 SR--------RGPTSVILRLPELAAPDAHFLY 140 (226)
T ss_dssp EE--------SCCSGGGGGHHHHEEEEEEEEE
T ss_pred eC--------CCHHHHHHHHHHHcCCCcEEEE
Confidence 86 1345688899999999999983
No 147
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.52 E-value=1.4e-14 Score=109.53 Aligned_cols=114 Identities=11% Similarity=0.115 Sum_probs=84.0
Q ss_pred hhcCCCcEEEEecCCCchhHHHHhhcC-CccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcc--cccCCCCC
Q psy1107 75 NQDVGEGVLLEVGCGVGNFIFPLLSWS-KICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDD--ILNQVPHN 149 (218)
Q Consensus 75 ~~~~~~~~vLDiGcG~G~~~~~~~~~~-~~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~--~~~~~~~~ 149 (218)
....++.+|||+|||+|..+..++... +..+|+++|+++.+++.+++++...+ .++.++++|+.+.. .......+
T Consensus 54 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~ 133 (221)
T 3u81_A 54 IREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVD 133 (221)
T ss_dssp HHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCC
T ss_pred HHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCC
Confidence 334567899999999999999999864 36799999999999999998865444 36999999875421 00111226
Q ss_pred cccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 150 SVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 150 ~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
+||+|++....++. .....++..+ ++|+|||.+++.+..
T Consensus 134 ~fD~V~~d~~~~~~--~~~~~~~~~~-~~LkpgG~lv~~~~~ 172 (221)
T 3u81_A 134 TLDMVFLDHWKDRY--LPDTLLLEKC-GLLRKGTVLLADNVI 172 (221)
T ss_dssp CCSEEEECSCGGGH--HHHHHHHHHT-TCCCTTCEEEESCCC
T ss_pred ceEEEEEcCCcccc--hHHHHHHHhc-cccCCCeEEEEeCCC
Confidence 89999987655444 2334566666 999999999986644
No 148
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.52 E-value=3.6e-14 Score=111.04 Aligned_cols=105 Identities=15% Similarity=0.264 Sum_probs=84.9
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccCCCCCcccE
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQVPHNSVDI 153 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~~D~ 153 (218)
...++.+|||+|||+|.++..++..++. +|+++|+|+.+++.+++++...+ .++.++++|+.+. .. .++||+
T Consensus 122 ~~~~~~~VLDlgcG~G~~~~~la~~~~~-~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~----~~-~~~fD~ 195 (278)
T 2frn_A 122 VAKPDELVVDMFAGIGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDF----PG-ENIADR 195 (278)
T ss_dssp HCCTTCEEEETTCTTTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTC----CC-CSCEEE
T ss_pred hCCCCCEEEEecccCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHh----cc-cCCccE
Confidence 3456889999999999999999988764 89999999999999998866444 3488999998772 22 568999
Q ss_pred EEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCC
Q psy1107 154 ATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGL 192 (218)
Q Consensus 154 i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~ 192 (218)
|++.. |.....++..+.++|+|||.+++.+...
T Consensus 196 Vi~~~------p~~~~~~l~~~~~~LkpgG~l~~~~~~~ 228 (278)
T 2frn_A 196 ILMGY------VVRTHEFIPKALSIAKDGAIIHYHNTVP 228 (278)
T ss_dssp EEECC------CSSGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred EEECC------chhHHHHHHHHHHHCCCCeEEEEEEeec
Confidence 99842 2344678889999999999999987653
No 149
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.52 E-value=1.2e-15 Score=116.85 Aligned_cols=104 Identities=17% Similarity=0.173 Sum_probs=81.1
Q ss_pred hhcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccCCCCCccc
Q psy1107 75 NQDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQVPHNSVD 152 (218)
Q Consensus 75 ~~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~~D 152 (218)
....++.+|||+|||+|.++..++..+ .+|+++|+|+.+++.++.++...+ .++.++++|+.+. . +.++||
T Consensus 74 ~~~~~~~~vLD~gcG~G~~~~~la~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~----~-~~~~~D 146 (241)
T 3gdh_A 74 SQSFKCDVVVDAFCGVGGNTIQFALTG--MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLL----A-SFLKAD 146 (241)
T ss_dssp HHHSCCSEEEETTCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHH----G-GGCCCS
T ss_pred hhccCCCEEEECccccCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHh----c-ccCCCC
Confidence 334478899999999999999999876 699999999999999998866555 4799999998762 1 345899
Q ss_pred EEEechhhcCCCcchHHHHHHHHHHhccCCeEEEE
Q psy1107 153 IATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILF 187 (218)
Q Consensus 153 ~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~ 187 (218)
+|++..++++.. .....+..+.++|+|||.+++
T Consensus 147 ~v~~~~~~~~~~--~~~~~~~~~~~~L~pgG~~i~ 179 (241)
T 3gdh_A 147 VVFLSPPWGGPD--YATAETFDIRTMMSPDGFEIF 179 (241)
T ss_dssp EEEECCCCSSGG--GGGSSSBCTTTSCSSCHHHHH
T ss_pred EEEECCCcCCcc--hhhhHHHHHHhhcCCcceeHH
Confidence 999988777663 333355566777788877554
No 150
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.52 E-value=2.1e-14 Score=109.02 Aligned_cols=109 Identities=14% Similarity=0.131 Sum_probs=75.3
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCC-HHHHHHH---HhCCcccC-CCceEEeccCCCcccccCCCCCcc
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDIS-PRAVNFF---KLNPLYDA-SKMNVFPCDVTEDDILNQVPHNSV 151 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s-~~~~~~~---~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~~~~ 151 (218)
..++.+|||||||+|.++..++...+..+|+|+|+| +.+++.| +++....+ .++.+.+.|+.... ..+. +.+
T Consensus 22 ~~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~--~~~~-d~v 98 (225)
T 3p2e_A 22 GQFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLP--FELK-NIA 98 (225)
T ss_dssp TTCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCC--GGGT-TCE
T ss_pred CCCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhh--hhcc-CeE
Confidence 356789999999999999999877777899999999 5666655 77655444 57899999887621 1111 244
Q ss_pred cEEEechhhcCCC---cchHHHHHHHHHHhccCCeEEEEE
Q psy1107 152 DIATLIFVLSAIH---PNKFSTVVKNLFIMLKSGGIILFR 188 (218)
Q Consensus 152 D~i~~~~~l~~~~---~~~~~~~l~~~~~~Lk~gG~li~~ 188 (218)
|.|.+.+...... ..+...++.++.++|||||.+++.
T Consensus 99 ~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~ 138 (225)
T 3p2e_A 99 DSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFV 138 (225)
T ss_dssp EEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEE
T ss_pred EEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEE
Confidence 5554432111100 012246789999999999999983
No 151
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.52 E-value=3.2e-14 Score=108.41 Aligned_cols=107 Identities=14% Similarity=0.073 Sum_probs=80.3
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcC-CccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEE
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWS-KICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIAT 155 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~-~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~ 155 (218)
..++.+|||+|||+|.++..++... +..+++++|+|+.+++.+.+++... .++.+..+|+.+... .+...++||+|+
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~-~~v~~~~~d~~~~~~-~~~~~~~~D~V~ 152 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR-TNIIPVIEDARHPHK-YRMLIAMVDVIF 152 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC-TTEEEECSCTTCGGG-GGGGCCCEEEEE
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc-CCeEEEEcccCChhh-hcccCCcEEEEE
Confidence 4567899999999999999998873 5679999999988666555443322 578999999876321 123345899999
Q ss_pred echhhcCCCcchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 156 LIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 156 ~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
+... .++....++..+.++|||||.+++..
T Consensus 153 ~~~~----~~~~~~~~~~~~~~~LkpgG~l~i~~ 182 (233)
T 2ipx_A 153 ADVA----QPDQTRIVALNAHTFLRNGGHFVISI 182 (233)
T ss_dssp ECCC----CTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EcCC----CccHHHHHHHHHHHHcCCCeEEEEEE
Confidence 8433 33455667888999999999999954
No 152
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.52 E-value=4e-14 Score=106.90 Aligned_cols=116 Identities=14% Similarity=0.072 Sum_probs=91.0
Q ss_pred HHHHHHhhhcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccC
Q psy1107 68 NEFHEFVNQDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQ 145 (218)
Q Consensus 68 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~ 145 (218)
+.+..+.....++.+|+|+|||+|.+++.++..+|..+|+++|+++.+++.|+.+....+ .++.+..+|..+. .
T Consensus 10 ~RL~~i~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~----~ 85 (230)
T 3lec_A 10 KRLQKVANYVPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSA----F 85 (230)
T ss_dssp HHHHHHHTTSCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGG----C
T ss_pred HHHHHHHHhCCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhc----c
Confidence 344445455677889999999999999999998887799999999999999999976655 4699999998662 2
Q ss_pred CCCCcccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 146 VPHNSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 146 ~~~~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
.+..+||+|+...+.. +....++......|+++|.|++....
T Consensus 86 ~~~~~~D~IviaGmGg----~lI~~IL~~~~~~l~~~~~lIlqp~~ 127 (230)
T 3lec_A 86 EEADNIDTITICGMGG----RLIADILNNDIDKLQHVKTLVLQPNN 127 (230)
T ss_dssp CGGGCCCEEEEEEECH----HHHHHHHHHTGGGGTTCCEEEEEESS
T ss_pred ccccccCEEEEeCCch----HHHHHHHHHHHHHhCcCCEEEEECCC
Confidence 2223699987644322 35678888899999999999987743
No 153
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.52 E-value=8e-14 Score=105.81 Aligned_cols=107 Identities=18% Similarity=0.130 Sum_probs=76.5
Q ss_pred cCCCcEEEEecCCCchhHHHHhhc-CCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEE
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSW-SKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIAT 155 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~-~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~ 155 (218)
..++.+|||+|||+|.++..++.. ++..+|+++|+++.+++.+...+.. ..++.++.+|+........+ .++||+|+
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~-r~nv~~i~~Da~~~~~~~~~-~~~~D~I~ 151 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQR-RPNIFPLLADARFPQSYKSV-VENVDVLY 151 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHH-CTTEEEEECCTTCGGGTTTT-CCCEEEEE
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhh-cCCeEEEEcccccchhhhcc-ccceEEEE
Confidence 567899999999999999999876 5667999999999876433222111 14799999998764321222 34899999
Q ss_pred echhhcCCCcchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 156 LIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 156 ~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
+.... ++....+...+.++|||||.|++..
T Consensus 152 ~d~a~----~~~~~il~~~~~~~LkpGG~lvisi 181 (232)
T 3id6_C 152 VDIAQ----PDQTDIAIYNAKFFLKVNGDMLLVI 181 (232)
T ss_dssp ECCCC----TTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ecCCC----hhHHHHHHHHHHHhCCCCeEEEEEE
Confidence 86432 2344444556677999999999875
No 154
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.51 E-value=3.5e-14 Score=105.99 Aligned_cols=106 Identities=10% Similarity=-0.034 Sum_probs=82.1
Q ss_pred CCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC-CCceEEeccCCCcccccCCCCCcccEEEec
Q psy1107 79 GEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA-SKMNVFPCDVTEDDILNQVPHNSVDIATLI 157 (218)
Q Consensus 79 ~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~~~~D~i~~~ 157 (218)
++.+|||+|||+|.++..++..+. .+|+++|+|+.+++.++++....+ .++.+++.|+.+. .+...++||+|++.
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~-~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~---~~~~~~~fD~V~~~ 129 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYA-AGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSF---LAQKGTPHNIVFVD 129 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHH---HSSCCCCEEEEEEC
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCC-CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHH---HhhcCCCCCEEEEC
Confidence 568999999999999998777653 399999999999999998866544 4789999987652 23345589999987
Q ss_pred hhhcCCCcchHHHHHHHHHH--hccCCeEEEEEecC
Q psy1107 158 FVLSAIHPNKFSTVVKNLFI--MLKSGGIILFRDYG 191 (218)
Q Consensus 158 ~~l~~~~~~~~~~~l~~~~~--~Lk~gG~li~~~~~ 191 (218)
..++ . .....++..+.+ +|+|||.+++....
T Consensus 130 ~p~~-~--~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 130 PPFR-R--GLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp CSSS-T--TTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred CCCC-C--CcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 6533 2 356677777765 59999999987644
No 155
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.51 E-value=2.5e-14 Score=103.82 Aligned_cols=110 Identities=13% Similarity=0.156 Sum_probs=83.1
Q ss_pred hhcCCCcEEEEecCCCchhHHHHhhc-CCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcc----cccCCCCC
Q psy1107 75 NQDVGEGVLLEVGCGVGNFIFPLLSW-SKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDD----ILNQVPHN 149 (218)
Q Consensus 75 ~~~~~~~~vLDiGcG~G~~~~~~~~~-~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----~~~~~~~~ 149 (218)
....++.+|||+|||+|.++..++.. ++..+++++|+++ ++.. .++.+...|+.+.. +...++.+
T Consensus 18 ~~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~---------~~~~~~~~d~~~~~~~~~~~~~~~~~ 87 (180)
T 1ej0_A 18 KLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI---------VGVDFLQGDFRDELVMKALLERVGDS 87 (180)
T ss_dssp CCCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC---------TTEEEEESCTTSHHHHHHHHHHHTTC
T ss_pred CCCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc---------CcEEEEEcccccchhhhhhhccCCCC
Confidence 33567789999999999999999887 4667999999998 5421 46888899987732 00014556
Q ss_pred cccEEEechhhcCCCcc---h------HHHHHHHHHHhccCCeEEEEEecCCCc
Q psy1107 150 SVDIATLIFVLSAIHPN---K------FSTVVKNLFIMLKSGGIILFRDYGLHD 194 (218)
Q Consensus 150 ~~D~i~~~~~l~~~~~~---~------~~~~l~~~~~~Lk~gG~li~~~~~~~~ 194 (218)
+||+|++..++++.... . ...++..+.++|+|||.+++..+....
T Consensus 88 ~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~ 141 (180)
T 1ej0_A 88 KVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEG 141 (180)
T ss_dssp CEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTT
T ss_pred ceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCc
Confidence 89999998877766421 1 168899999999999999998765544
No 156
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.51 E-value=6.2e-14 Score=112.73 Aligned_cols=105 Identities=16% Similarity=0.184 Sum_probs=83.3
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccCCCCCcccE
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQVPHNSVDI 153 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~~D~ 153 (218)
...++.+|||+|||+|.++..+++.+ ..+|+++|+|+ +++.|+++....+ .++.++.+|+.+ .+++.++||+
T Consensus 61 ~~~~~~~VLDiGcGtG~ls~~la~~g-~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~----~~~~~~~~D~ 134 (340)
T 2fyt_A 61 HIFKDKVVLDVGCGTGILSMFAAKAG-AKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEE----VHLPVEKVDV 134 (340)
T ss_dssp GGTTTCEEEEETCTTSHHHHHHHHTT-CSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTT----SCCSCSCEEE
T ss_pred hhcCCCEEEEeeccCcHHHHHHHHcC-CCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHH----hcCCCCcEEE
Confidence 34677899999999999999998875 34999999996 8999888755443 579999999877 3556668999
Q ss_pred EEechhhcCC-CcchHHHHHHHHHHhccCCeEEE
Q psy1107 154 ATLIFVLSAI-HPNKFSTVVKNLFIMLKSGGIIL 186 (218)
Q Consensus 154 i~~~~~l~~~-~~~~~~~~l~~~~~~Lk~gG~li 186 (218)
|++..+...+ .......++..+.++|||||.++
T Consensus 135 Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 135 IISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp EEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred EEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 9986632222 22467789999999999999987
No 157
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.51 E-value=2.4e-14 Score=109.25 Aligned_cols=103 Identities=21% Similarity=0.168 Sum_probs=82.5
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC-CCceEEeccCCCcccccCCCC-CcccE
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA-SKMNVFPCDVTEDDILNQVPH-NSVDI 153 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~-~~~D~ 153 (218)
...++.+|||+|||+|.++..++...+ .+++++|+++.+++.++++....+ .++.+..+|+.. .++. .+||+
T Consensus 88 ~~~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~-----~~~~~~~fD~ 161 (235)
T 1jg1_A 88 NLKPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSK-----GFPPKAPYDV 161 (235)
T ss_dssp TCCTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGG-----CCGGGCCEEE
T ss_pred CCCCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCccc-----CCCCCCCccE
Confidence 456778999999999999999998876 699999999999999998765443 468888888722 2332 35999
Q ss_pred EEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCC
Q psy1107 154 ATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGL 192 (218)
Q Consensus 154 i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~ 192 (218)
|++..++++++ ..+.+.|+|||.+++.....
T Consensus 162 Ii~~~~~~~~~--------~~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 162 IIVTAGAPKIP--------EPLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp EEECSBBSSCC--------HHHHHTEEEEEEEEEEECSS
T ss_pred EEECCcHHHHH--------HHHHHhcCCCcEEEEEEecC
Confidence 99998888775 25788999999999977543
No 158
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.51 E-value=3.7e-14 Score=107.25 Aligned_cols=111 Identities=12% Similarity=-0.014 Sum_probs=85.0
Q ss_pred hhcCCCcEEEEecCCCchhHHHHhhcCC-ccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCccccc-CCCCCc
Q psy1107 75 NQDVGEGVLLEVGCGVGNFIFPLLSWSK-ICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILN-QVPHNS 150 (218)
Q Consensus 75 ~~~~~~~~vLDiGcG~G~~~~~~~~~~~-~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~-~~~~~~ 150 (218)
....++.+|||+|||+|..+..++...| ..+++++|+++.+++.+++++...+ .++.++++|+.+..... ....++
T Consensus 54 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 133 (223)
T 3duw_A 54 VQIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEP 133 (223)
T ss_dssp HHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCC
T ss_pred HHhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCC
Confidence 3445778999999999999999998866 6799999999999999998865433 36899999886521000 011147
Q ss_pred ccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEec
Q psy1107 151 VDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 151 ~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~ 190 (218)
||+|++... ......++..+.++|+|||.+++.+.
T Consensus 134 fD~v~~d~~-----~~~~~~~l~~~~~~L~pgG~lv~~~~ 168 (223)
T 3duw_A 134 FDFIFIDAD-----KQNNPAYFEWALKLSRPGTVIIGDNV 168 (223)
T ss_dssp CSEEEECSC-----GGGHHHHHHHHHHTCCTTCEEEEESC
T ss_pred cCEEEEcCC-----cHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 999997543 24667899999999999998888653
No 159
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.51 E-value=5.1e-14 Score=102.84 Aligned_cols=104 Identities=14% Similarity=0.153 Sum_probs=83.7
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC-CCceEEeccCCCcccccCCCCCcccEE
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA-SKMNVFPCDVTEDDILNQVPHNSVDIA 154 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~~~~D~i 154 (218)
...++.+|||+|||+|.++..++. +..+++++|+++.+++.++.+....+ .++.+.+.|+.+ .++.++||+|
T Consensus 32 ~~~~~~~vLdiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~-----~~~~~~~D~i 104 (183)
T 2yxd_A 32 NLNKDDVVVDVGCGSGGMTVEIAK--RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED-----VLDKLEFNKA 104 (183)
T ss_dssp CCCTTCEEEEESCCCSHHHHHHHT--TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH-----HGGGCCCSEE
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc-----cccCCCCcEE
Confidence 345678999999999999999987 55799999999999999998865444 478999998865 2233589999
Q ss_pred EechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCCCc
Q psy1107 155 TLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLHD 194 (218)
Q Consensus 155 ~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~~~ 194 (218)
++..+ .+...++..+.++ |||.+++.......
T Consensus 105 ~~~~~------~~~~~~l~~~~~~--~gG~l~~~~~~~~~ 136 (183)
T 2yxd_A 105 FIGGT------KNIEKIIEILDKK--KINHIVANTIVLEN 136 (183)
T ss_dssp EECSC------SCHHHHHHHHHHT--TCCEEEEEESCHHH
T ss_pred EECCc------ccHHHHHHHHhhC--CCCEEEEEeccccc
Confidence 99766 3567888888888 99999998755443
No 160
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.51 E-value=1.2e-13 Score=107.45 Aligned_cols=100 Identities=16% Similarity=0.217 Sum_probs=82.2
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEec
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATLI 157 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~~ 157 (218)
.++.+|||+|||+|.++..++...+..+++++|+|+.+++.++++. .++.+...|+.+ .++++++||+|++.
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~d~~~----~~~~~~~fD~v~~~ 155 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY----PQVTFCVASSHR----LPFSDTSMDAIIRI 155 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC----TTSEEEECCTTS----CSBCTTCEEEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC----CCcEEEEcchhh----CCCCCCceeEEEEe
Confidence 5678999999999999999998766679999999999999998763 467888888876 34566789999986
Q ss_pred hhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCCCc
Q psy1107 158 FVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLHD 194 (218)
Q Consensus 158 ~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~~~ 194 (218)
.+. ..+.++.++|+|||.+++.......
T Consensus 156 ~~~---------~~l~~~~~~L~pgG~l~~~~~~~~~ 183 (269)
T 1p91_A 156 YAP---------CKAEELARVVKPGGWVITATPGPRH 183 (269)
T ss_dssp SCC---------CCHHHHHHHEEEEEEEEEEEECTTT
T ss_pred CCh---------hhHHHHHHhcCCCcEEEEEEcCHHH
Confidence 441 2478899999999999998866544
No 161
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.51 E-value=3.2e-14 Score=115.94 Aligned_cols=107 Identities=15% Similarity=0.169 Sum_probs=85.8
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccCCCCCcccE
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQVPHNSVDI 153 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~~D~ 153 (218)
...++.+|||+|||+|.++..+++.+. .+|+++|+| .+++.++++....+ .++.++++|+.+ ..++ ++||+
T Consensus 60 ~~~~~~~VLDlGcGtG~ls~~la~~g~-~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~----~~~~-~~~D~ 132 (376)
T 3r0q_C 60 HHFEGKTVLDVGTGSGILAIWSAQAGA-RKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVED----ISLP-EKVDV 132 (376)
T ss_dssp TTTTTCEEEEESCTTTHHHHHHHHTTC-SEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGG----CCCS-SCEEE
T ss_pred ccCCCCEEEEeccCcCHHHHHHHhcCC-CEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhh----cCcC-CcceE
Confidence 346788999999999999999998764 399999999 99999988765444 458999999976 2333 68999
Q ss_pred EEechhhcCCC-cchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 154 ATLIFVLSAIH-PNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 154 i~~~~~l~~~~-~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
|++..+.+++. ......++..+.++|+|||.+++..
T Consensus 133 Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 133 IISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp EEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred EEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 99966555443 2467889999999999999998744
No 162
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.51 E-value=3.6e-14 Score=113.09 Aligned_cols=105 Identities=14% Similarity=0.041 Sum_probs=85.0
Q ss_pred hhcCCCcEEEEecCCCchhHHHHhhcCC-ccEEEEEeCCHHHHHHHHhCCcccC-CCceEEeccCCCcccccCCCCCccc
Q psy1107 75 NQDVGEGVLLEVGCGVGNFIFPLLSWSK-ICYIHACDISPRAVNFFKLNPLYDA-SKMNVFPCDVTEDDILNQVPHNSVD 152 (218)
Q Consensus 75 ~~~~~~~~vLDiGcG~G~~~~~~~~~~~-~~~v~~~D~s~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~~~~D 152 (218)
....++.+|||+|||+|.++..++..++ ..+|+++|+|+.+++.++++....+ .++.+...|+.+. ..+.++||
T Consensus 71 l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~----~~~~~~fD 146 (317)
T 1dl5_A 71 VGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYG----VPEFSPYD 146 (317)
T ss_dssp TTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC----CGGGCCEE
T ss_pred cCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhc----cccCCCeE
Confidence 3456788999999999999999998765 3679999999999999998865444 4689999988662 22345899
Q ss_pred EEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 153 IATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 153 ~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
+|++..++++++ ..+.++|||||.+++....
T Consensus 147 ~Iv~~~~~~~~~--------~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 147 VIFVTVGVDEVP--------ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp EEEECSBBSCCC--------HHHHHHEEEEEEEEEEBCB
T ss_pred EEEEcCCHHHHH--------HHHHHhcCCCcEEEEEECC
Confidence 999999998885 4678899999999997643
No 163
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.51 E-value=5.3e-14 Score=104.62 Aligned_cols=108 Identities=14% Similarity=0.197 Sum_probs=78.6
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCC--ccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCccc------------
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSK--ICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDI------------ 142 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~--~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~------------ 142 (218)
..++.+|||+|||+|.++..++...+ ..+++++|+|+.+ ...++.+.+.|+.+...
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~----------~~~~v~~~~~d~~~~~~~~~~~~~~i~~~ 89 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD----------PIPNVYFIQGEIGKDNMNNIKNINYIDNM 89 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC----------CCTTCEEEECCTTTTSSCCC---------
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC----------CCCCceEEEccccchhhhhhccccccccc
Confidence 45678999999999999999998866 5799999999831 12468888998876320
Q ss_pred ---------ccCCCCCcccEEEechhhcCCCc---ch------HHHHHHHHHHhccCCeEEEEEecCCCc
Q psy1107 143 ---------LNQVPHNSVDIATLIFVLSAIHP---NK------FSTVVKNLFIMLKSGGIILFRDYGLHD 194 (218)
Q Consensus 143 ---------~~~~~~~~~D~i~~~~~l~~~~~---~~------~~~~l~~~~~~Lk~gG~li~~~~~~~~ 194 (218)
...++..+||+|++...+++... +. ...++..+.++|+|||.|++..+....
T Consensus 90 ~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~ 159 (201)
T 2plw_A 90 NNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYLGSQ 159 (201)
T ss_dssp --CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTT
T ss_pred cchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeCCCC
Confidence 00034568999999776655321 11 124788899999999999997766444
No 164
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.51 E-value=3.8e-14 Score=108.30 Aligned_cols=102 Identities=11% Similarity=0.114 Sum_probs=79.1
Q ss_pred CCcEEEEecCCCchhHHHHhhc----CCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEE
Q psy1107 79 GEGVLLEVGCGVGNFIFPLLSW----SKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIA 154 (218)
Q Consensus 79 ~~~~vLDiGcG~G~~~~~~~~~----~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i 154 (218)
++.+|||||||+|..+..+++. ++..+|+++|+++.+++.|+. ...++.++++|+.+..........+||+|
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~----~~~~v~~~~gD~~~~~~l~~~~~~~fD~I 156 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS----DMENITLHQGDCSDLTTFEHLREMAHPLI 156 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG----GCTTEEEEECCSSCSGGGGGGSSSCSSEE
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc----cCCceEEEECcchhHHHHHhhccCCCCEE
Confidence 5679999999999999999886 567899999999999887762 23579999999876311111223379999
Q ss_pred EechhhcCCCcchHHHHHHHHHH-hccCCeEEEEEe
Q psy1107 155 TLIFVLSAIHPNKFSTVVKNLFI-MLKSGGIILFRD 189 (218)
Q Consensus 155 ~~~~~l~~~~~~~~~~~l~~~~~-~Lk~gG~li~~~ 189 (218)
++... |. +...++..+.+ +|||||+|++.+
T Consensus 157 ~~d~~--~~---~~~~~l~~~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 157 FIDNA--HA---NTFNIMKWAVDHLLEEGDYFIIED 187 (236)
T ss_dssp EEESS--CS---SHHHHHHHHHHHTCCTTCEEEECS
T ss_pred EECCc--hH---hHHHHHHHHHHhhCCCCCEEEEEe
Confidence 98654 22 56778999997 999999999965
No 165
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.51 E-value=5.1e-14 Score=106.58 Aligned_cols=112 Identities=10% Similarity=0.071 Sum_probs=85.7
Q ss_pred hhcCCCcEEEEecCCCchhHHHHhhcCC-ccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcc--cccCCCCC
Q psy1107 75 NQDVGEGVLLEVGCGVGNFIFPLLSWSK-ICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDD--ILNQVPHN 149 (218)
Q Consensus 75 ~~~~~~~~vLDiGcG~G~~~~~~~~~~~-~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~--~~~~~~~~ 149 (218)
....++.+|||+|||+|..+..++...+ ..+++++|+++.+++.++++....+ .++.++++|+.+.. .......+
T Consensus 60 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~ 139 (225)
T 3tr6_A 60 VKLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAW 139 (225)
T ss_dssp HHHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTT
T ss_pred HHhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCC
Confidence 3445678999999999999999998765 6799999999999999998865444 45999999875521 00011115
Q ss_pred cccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 150 SVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 150 ~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
+||+|++.. +......++..+.++|+|||++++.+..
T Consensus 140 ~fD~v~~~~-----~~~~~~~~l~~~~~~L~pgG~lv~~~~~ 176 (225)
T 3tr6_A 140 QYDLIYIDA-----DKANTDLYYEESLKLLREGGLIAVDNVL 176 (225)
T ss_dssp CEEEEEECS-----CGGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred CccEEEECC-----CHHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 899999643 2346778999999999999999986643
No 166
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.51 E-value=3.1e-14 Score=108.28 Aligned_cols=109 Identities=16% Similarity=0.182 Sum_probs=90.9
Q ss_pred hhcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEE
Q psy1107 75 NQDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIA 154 (218)
Q Consensus 75 ~~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i 154 (218)
....++.+|||+|||.|.++..++...|...|+++|+++.+++.++.++...+....+.+.|... ..+.++||++
T Consensus 128 ~~i~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~-----~~p~~~~Dva 202 (281)
T 3lcv_B 128 RHLPRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLE-----DRLDEPADVT 202 (281)
T ss_dssp GGSCCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTT-----SCCCSCCSEE
T ss_pred hccCCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecc-----cCCCCCcchH
Confidence 34466889999999999999999988888999999999999999999987767678888888755 4456689999
Q ss_pred EechhhcCCCcchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 155 TLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 155 ~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
++.-+++++..+.....+ .+...|+++|+++--+
T Consensus 203 L~lkti~~Le~q~kg~g~-~ll~aL~~~~vvVSfp 236 (281)
T 3lcv_B 203 LLLKTLPCLETQQRGSGW-EVIDIVNSPNIVVTFP 236 (281)
T ss_dssp EETTCHHHHHHHSTTHHH-HHHHHSSCSEEEEEEE
T ss_pred HHHHHHHHhhhhhhHHHH-HHHHHhCCCCEEEecc
Confidence 999999999644444666 8999999999776644
No 167
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.50 E-value=4.9e-14 Score=110.12 Aligned_cols=105 Identities=16% Similarity=0.084 Sum_probs=86.0
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhc-CCccEEEEEeCCHHHHHHHHhCCccc-C-CCceEEeccCCCcccccCCCCCccc
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSW-SKICYIHACDISPRAVNFFKLNPLYD-A-SKMNVFPCDVTEDDILNQVPHNSVD 152 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~-~~~~~v~~~D~s~~~~~~~~~~~~~~-~-~~i~~~~~d~~~~~~~~~~~~~~~D 152 (218)
...++.+|||+|||+|.++..++.. .|..+++++|+++.+++.++++.... + .++.+..+|+.+ .++.++||
T Consensus 107 ~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~-----~~~~~~fD 181 (275)
T 1yb2_A 107 GLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD-----FISDQMYD 181 (275)
T ss_dssp CCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT-----CCCSCCEE
T ss_pred CCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhc-----cCcCCCcc
Confidence 4567789999999999999999987 56679999999999999999886544 3 578999998865 33456899
Q ss_pred EEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCC
Q psy1107 153 IATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGL 192 (218)
Q Consensus 153 ~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~ 192 (218)
+|++ +++ +...+++.+.++|+|||.+++.....
T Consensus 182 ~Vi~-----~~~--~~~~~l~~~~~~LkpgG~l~i~~~~~ 214 (275)
T 1yb2_A 182 AVIA-----DIP--DPWNHVQKIASMMKPGSVATFYLPNF 214 (275)
T ss_dssp EEEE-----CCS--CGGGSHHHHHHTEEEEEEEEEEESSH
T ss_pred EEEE-----cCc--CHHHHHHHHHHHcCCCCEEEEEeCCH
Confidence 9997 333 44678999999999999999987543
No 168
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.50 E-value=5.9e-14 Score=106.83 Aligned_cols=116 Identities=5% Similarity=-0.007 Sum_probs=90.3
Q ss_pred HHHHHHhhhcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccC
Q psy1107 68 NEFHEFVNQDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQ 145 (218)
Q Consensus 68 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~ 145 (218)
..+..+.....++.+|||||||+|.+++.++..+|..+++++|+++.+++.|++++...+ .++.+..+|..+. .
T Consensus 10 ~RL~~i~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~----~ 85 (244)
T 3gnl_A 10 KRLEKVASYITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAV----I 85 (244)
T ss_dssp HHHHHHHTTCCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGG----C
T ss_pred HHHHHHHHhCCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhc----c
Confidence 344445455677889999999999999999998887799999999999999999976655 3589999998662 2
Q ss_pred CCCCcccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 146 VPHNSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 146 ~~~~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
.+..+||+|+...+ ..+....++......|+++|.|++....
T Consensus 86 ~~~~~~D~Iviagm----Gg~lI~~IL~~~~~~L~~~~~lIlq~~~ 127 (244)
T 3gnl_A 86 EKKDAIDTIVIAGM----GGTLIRTILEEGAAKLAGVTKLILQPNI 127 (244)
T ss_dssp CGGGCCCEEEEEEE----CHHHHHHHHHHTGGGGTTCCEEEEEESS
T ss_pred CccccccEEEEeCC----chHHHHHHHHHHHHHhCCCCEEEEEcCC
Confidence 22225999886433 2235678889999999999999987643
No 169
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.50 E-value=7.9e-14 Score=108.76 Aligned_cols=107 Identities=20% Similarity=0.302 Sum_probs=87.8
Q ss_pred hhcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC-CCceEEeccCCCcccccCCCCCcccE
Q psy1107 75 NQDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA-SKMNVFPCDVTEDDILNQVPHNSVDI 153 (218)
Q Consensus 75 ~~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~~~~D~ 153 (218)
....++.+|||+|||+|.++..++..++..+|+++|+++.+++.+++++...+ .++.++++|+.+. +. .++||+
T Consensus 115 ~~~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~----~~-~~~~D~ 189 (272)
T 3a27_A 115 FISNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDV----EL-KDVADR 189 (272)
T ss_dssp TSCCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGC----CC-TTCEEE
T ss_pred HhcCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHc----Cc-cCCceE
Confidence 44567889999999999999999988766799999999999999999876555 5788999998762 22 458999
Q ss_pred EEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCC
Q psy1107 154 ATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGL 192 (218)
Q Consensus 154 i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~ 192 (218)
|++... .....++..+.+.|+|||.+++.++..
T Consensus 190 Vi~d~p------~~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 190 VIMGYV------HKTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp EEECCC------SSGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred EEECCc------ccHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 997532 245678899999999999999988665
No 170
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.50 E-value=3.9e-14 Score=106.25 Aligned_cols=104 Identities=10% Similarity=0.000 Sum_probs=82.5
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCC-ccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccCCCCCcccE
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSK-ICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQVPHNSVDI 153 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~-~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~~D~ 153 (218)
..++.+|||+|||+|..+..++...+ ..+++++|+++.+++.++++....+ .++.++.+|+.+. .+...+ ||+
T Consensus 54 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~~~-fD~ 129 (210)
T 3c3p_A 54 IKQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGI---AAGQRD-IDI 129 (210)
T ss_dssp HHCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHH---HTTCCS-EEE
T ss_pred hhCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHH---hccCCC-CCE
Confidence 34678999999999999999998765 6799999999999999998765433 3688999887651 122235 999
Q ss_pred EEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 154 ATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 154 i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
|++... ......+++.+.++|+|||.+++.+
T Consensus 130 v~~~~~-----~~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 130 LFMDCD-----VFNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp EEEETT-----TSCHHHHHHHHGGGEEEEEEEEEES
T ss_pred EEEcCC-----hhhhHHHHHHHHHhcCCCeEEEEEC
Confidence 998632 2467789999999999999998854
No 171
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.50 E-value=6.7e-14 Score=112.90 Aligned_cols=105 Identities=21% Similarity=0.242 Sum_probs=84.3
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccCCCCCcccEE
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQVPHNSVDIA 154 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~~D~i 154 (218)
..++.+|||+|||+|.++..+++.+ ..+|+++|+|+ +++.++++....+ .++.++.+|+.+. .++ ++||+|
T Consensus 48 ~~~~~~VLDiGcGtG~ls~~la~~g-~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~----~~~-~~~D~I 120 (348)
T 2y1w_A 48 DFKDKIVLDVGCGSGILSFFAAQAG-ARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEV----SLP-EQVDII 120 (348)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHTT-CSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTC----CCS-SCEEEE
T ss_pred cCCcCEEEEcCCCccHHHHHHHhCC-CCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhC----CCC-CceeEE
Confidence 4577899999999999999988764 35999999996 7788877654433 5799999998772 333 479999
Q ss_pred EechhhcCCCcchHHHHHHHHHHhccCCeEEEEE
Q psy1107 155 TLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFR 188 (218)
Q Consensus 155 ~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~ 188 (218)
++..+++|+..+.....+..+.++|+|||.+++.
T Consensus 121 vs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 121 ISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp EECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred EEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 9988877776566777888899999999999853
No 172
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.50 E-value=1.2e-14 Score=120.00 Aligned_cols=105 Identities=11% Similarity=0.139 Sum_probs=80.4
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEe
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATL 156 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~ 156 (218)
..++.+|||+|||+|.++..++..+ .+++|+|+|+.+++.++++... .....+...+... .++++++||+|++
T Consensus 105 ~~~~~~VLDiGcG~G~~~~~l~~~g--~~v~gvD~s~~~~~~a~~~~~~-~~~~~~~~~~~~~----l~~~~~~fD~I~~ 177 (416)
T 4e2x_A 105 TGPDPFIVEIGCNDGIMLRTIQEAG--VRHLGFEPSSGVAAKAREKGIR-VRTDFFEKATADD----VRRTEGPANVIYA 177 (416)
T ss_dssp CSSSCEEEEETCTTTTTHHHHHHTT--CEEEEECCCHHHHHHHHTTTCC-EECSCCSHHHHHH----HHHHHCCEEEEEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHcC--CcEEEECCCHHHHHHHHHcCCC-cceeeechhhHhh----cccCCCCEEEEEE
Confidence 3567899999999999999999875 4999999999999999976110 0011111111111 2234568999999
Q ss_pred chhhcCCCcchHHHHHHHHHHhccCCeEEEEEec
Q psy1107 157 IFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 157 ~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~ 190 (218)
..+++|++ ++..+++.+.++|||||.+++...
T Consensus 178 ~~vl~h~~--d~~~~l~~~~r~LkpgG~l~i~~~ 209 (416)
T 4e2x_A 178 ANTLCHIP--YVQSVLEGVDALLAPDGVFVFEDP 209 (416)
T ss_dssp ESCGGGCT--THHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CChHHhcC--CHHHHHHHHHHHcCCCeEEEEEeC
Confidence 99999995 889999999999999999999753
No 173
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.50 E-value=2.7e-14 Score=110.30 Aligned_cols=106 Identities=13% Similarity=0.139 Sum_probs=84.3
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEe
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATL 156 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~ 156 (218)
..++.+|||+|||+|.++..++..++ +++++|+++.+++.++.+....+..+.+...|+.+. ++.++||+|++
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~~g~--~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~-----~~~~~fD~Vv~ 190 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEKLGG--KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAA-----LPFGPFDLLVA 190 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHH-----GGGCCEEEEEE
T ss_pred cCCCCEEEEecCCCcHHHHHHHHhCC--eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhc-----CcCCCCCEEEE
Confidence 46778999999999999999988775 999999999999999988655443378888877551 33458999998
Q ss_pred chhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCCCc
Q psy1107 157 IFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLHD 194 (218)
Q Consensus 157 ~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~~~ 194 (218)
+... +....++..+.++|+|||.+++.......
T Consensus 191 n~~~-----~~~~~~l~~~~~~LkpgG~lils~~~~~~ 223 (254)
T 2nxc_A 191 NLYA-----ELHAALAPRYREALVPGGRALLTGILKDR 223 (254)
T ss_dssp ECCH-----HHHHHHHHHHHHHEEEEEEEEEEEEEGGG
T ss_pred CCcH-----HHHHHHHHHHHHHcCCCCEEEEEeeccCC
Confidence 6433 34568899999999999999997754443
No 174
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.49 E-value=5.4e-14 Score=108.50 Aligned_cols=105 Identities=17% Similarity=0.169 Sum_probs=86.1
Q ss_pred hhcCCCcEEEEecCCCchhHHHHhhc-CCccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccCCCCCcc
Q psy1107 75 NQDVGEGVLLEVGCGVGNFIFPLLSW-SKICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQVPHNSV 151 (218)
Q Consensus 75 ~~~~~~~~vLDiGcG~G~~~~~~~~~-~~~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~~ 151 (218)
....++.+|||+|||+|.++..++.. +|..+++++|+++.+++.|+++....+ .++.+...|+.+ .++.++|
T Consensus 89 ~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-----~~~~~~~ 163 (255)
T 3mb5_A 89 AGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYE-----GIEEENV 163 (255)
T ss_dssp TTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGG-----CCCCCSE
T ss_pred hCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhh-----ccCCCCc
Confidence 44567889999999999999999988 777899999999999999998865444 348999999875 3556689
Q ss_pred cEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 152 DIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 152 D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
|+|++. .+ +...++..+.++|+|||.+++....
T Consensus 164 D~v~~~-----~~--~~~~~l~~~~~~L~~gG~l~~~~~~ 196 (255)
T 3mb5_A 164 DHVILD-----LP--QPERVVEHAAKALKPGGFFVAYTPC 196 (255)
T ss_dssp EEEEEC-----SS--CGGGGHHHHHHHEEEEEEEEEEESS
T ss_pred CEEEEC-----CC--CHHHHHHHHHHHcCCCCEEEEEECC
Confidence 999973 32 4457899999999999999997644
No 175
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.49 E-value=4.6e-14 Score=107.52 Aligned_cols=108 Identities=13% Similarity=0.093 Sum_probs=85.7
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccCCCCCcccE
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQVPHNSVDI 153 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~~D~ 153 (218)
...++.+|||+|||+|..+..++...|..+++++|+++.+++.++.+....+ .++.+..+|+.+... .....++||+
T Consensus 51 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~~~fD~ 129 (233)
T 2gpy_A 51 KMAAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGE-KLELYPLFDV 129 (233)
T ss_dssp HHHCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHH-HHTTSCCEEE
T ss_pred hccCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHH-hcccCCCccE
Confidence 3456789999999999999999988777799999999999999998865443 368899988865210 0111358999
Q ss_pred EEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 154 ATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 154 i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
|++.... .+...++..+.++|+|||.+++.+
T Consensus 130 I~~~~~~-----~~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 130 LFIDAAK-----GQYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp EEEEGGG-----SCHHHHHHHHGGGEEEEEEEEEET
T ss_pred EEECCCH-----HHHHHHHHHHHHHcCCCeEEEEEc
Confidence 9986653 256789999999999999999965
No 176
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.49 E-value=8.6e-14 Score=109.93 Aligned_cols=109 Identities=11% Similarity=0.013 Sum_probs=85.3
Q ss_pred cEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCccc-CCCceEEeccCCCcccccCCCCCcccEEEechh
Q psy1107 81 GVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYD-ASKMNVFPCDVTEDDILNQVPHNSVDIATLIFV 159 (218)
Q Consensus 81 ~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~-~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~~~~ 159 (218)
.+|||||||.|..+..+++..|..+++++|+++.+++.+++++... ..++.++..|.... ....+.++||+|++...
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~--l~~~~~~~fDvIi~D~~ 168 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMV--AESFTPASRDVIIRDVF 168 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHH--HHTCCTTCEEEEEECCS
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHH--HhhccCCCCCEEEECCC
Confidence 4999999999999999998778789999999999999999986543 36899999998652 22344568999998543
Q ss_pred hcCCCcch--HHHHHHHHHHhccCCeEEEEEecC
Q psy1107 160 LSAIHPNK--FSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 160 l~~~~~~~--~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
.....+.. ...+++.+.++|+|||+|++....
T Consensus 169 ~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~ 202 (317)
T 3gjy_A 169 AGAITPQNFTTVEFFEHCHRGLAPGGLYVANCGD 202 (317)
T ss_dssp TTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CccccchhhhHHHHHHHHHHhcCCCcEEEEEecC
Confidence 22222222 267899999999999999986643
No 177
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.49 E-value=9.9e-14 Score=102.00 Aligned_cols=107 Identities=21% Similarity=0.296 Sum_probs=85.0
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccCCCC-Cccc
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQVPH-NSVD 152 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~-~~~D 152 (218)
...++.+|||+|||+|.++..++..+ .+++++|+++.+++.++.+....+ .++.+.+.|+.+. ++. ++||
T Consensus 30 ~~~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~-----~~~~~~~D 102 (192)
T 1l3i_A 30 EPGKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEA-----LCKIPDID 102 (192)
T ss_dssp CCCTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHH-----HTTSCCEE
T ss_pred CCCCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHh-----cccCCCCC
Confidence 45677899999999999999998877 699999999999999998754433 4788888887541 111 3799
Q ss_pred EEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCCCc
Q psy1107 153 IATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLHD 194 (218)
Q Consensus 153 ~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~~~ 194 (218)
+|++..+++ ....++..+.++|+|||.+++.......
T Consensus 103 ~v~~~~~~~-----~~~~~l~~~~~~l~~gG~l~~~~~~~~~ 139 (192)
T 1l3i_A 103 IAVVGGSGG-----ELQEILRIIKDKLKPGGRIIVTAILLET 139 (192)
T ss_dssp EEEESCCTT-----CHHHHHHHHHHTEEEEEEEEEEECBHHH
T ss_pred EEEECCchH-----HHHHHHHHHHHhcCCCcEEEEEecCcch
Confidence 999876543 4578999999999999999998755433
No 178
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.49 E-value=4.1e-14 Score=116.35 Aligned_cols=111 Identities=15% Similarity=0.108 Sum_probs=82.5
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHH-------HhCCcccC---CCceEEeccCCCcccccC
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFF-------KLNPLYDA---SKMNVFPCDVTEDDILNQ 145 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~-------~~~~~~~~---~~i~~~~~d~~~~~~~~~ 145 (218)
...++.+|||+|||+|.++..++...+..+++|+|+++.+++.| +.++...+ .++.++++|.........
T Consensus 239 ~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~~~ 318 (433)
T 1u2z_A 239 QLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVA 318 (433)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHH
T ss_pred CCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCccccccccc
Confidence 45678899999999999999999876555899999999999888 66654333 578888875432110000
Q ss_pred CCCCcccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 146 VPHNSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 146 ~~~~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
...++||+|++..++ +. .+....+.++.+.|||||.+++.+
T Consensus 319 ~~~~~FDvIvvn~~l-~~--~d~~~~L~el~r~LKpGG~lVi~d 359 (433)
T 1u2z_A 319 ELIPQCDVILVNNFL-FD--EDLNKKVEKILQTAKVGCKIISLK 359 (433)
T ss_dssp HHGGGCSEEEECCTT-CC--HHHHHHHHHHHTTCCTTCEEEESS
T ss_pred cccCCCCEEEEeCcc-cc--ccHHHHHHHHHHhCCCCeEEEEee
Confidence 012479999987555 22 467778899999999999999975
No 179
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.48 E-value=1.3e-14 Score=124.11 Aligned_cols=110 Identities=17% Similarity=0.122 Sum_probs=84.8
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC-CCceEEeccCCCcccccCCCCCcccEE
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA-SKMNVFPCDVTEDDILNQVPHNSVDIA 154 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~~~~D~i 154 (218)
...++.+|||||||.|.++..+++.+ ++|+|+|+++.+++.|+.++...+ .++.|.++++.+. ......++||+|
T Consensus 63 ~~~~~~~vLDvGCG~G~~~~~la~~g--a~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~--~~~~~~~~fD~v 138 (569)
T 4azs_A 63 ALGRPLNVLDLGCAQGFFSLSLASKG--ATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEV--IAALEEGEFDLA 138 (569)
T ss_dssp HHTSCCEEEEETCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHH--HHHCCTTSCSEE
T ss_pred hcCCCCeEEEECCCCcHHHHHHHhCC--CEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHH--hhhccCCCccEE
Confidence 34677899999999999999999987 599999999999999998876555 5799999988662 123456689999
Q ss_pred EechhhcCCCcchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 155 TLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 155 ~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
+|+.+++|++.......+..+.+.|+++|..++..
T Consensus 139 ~~~e~~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~ 173 (569)
T 4azs_A 139 IGLSVFHHIVHLHGIDEVKRLLSRLADVTQAVILE 173 (569)
T ss_dssp EEESCHHHHHHHHCHHHHHHHHHHHHHHSSEEEEE
T ss_pred EECcchhcCCCHHHHHHHHHHHHHhccccceeeEE
Confidence 99999999963222223344666777777666544
No 180
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.48 E-value=8.6e-14 Score=112.46 Aligned_cols=115 Identities=17% Similarity=0.188 Sum_probs=82.7
Q ss_pred chHHHHHHhh-hcCCCcEEEEecCC------CchhHHHHhhc-CCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccC
Q psy1107 66 TVNEFHEFVN-QDVGEGVLLEVGCG------VGNFIFPLLSW-SKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDV 137 (218)
Q Consensus 66 ~~~~~~~~~~-~~~~~~~vLDiGcG------~G~~~~~~~~~-~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~ 137 (218)
....+..++. ...++.+||||||| +|..+..++.. +|..+|+++|+|+.+. ....++.|+++|+
T Consensus 202 y~~~Ye~lL~~l~~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~--------~~~~rI~fv~GDa 273 (419)
T 3sso_A 202 FTPHYDRHFRDYRNQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH--------VDELRIRTIQGDQ 273 (419)
T ss_dssp CHHHHHHHHGGGTTSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG--------GCBTTEEEEECCT
T ss_pred HHHHHHHHHHhhcCCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh--------hcCCCcEEEEecc
Confidence 3444555442 23467899999999 67777777654 5778999999999872 1235899999999
Q ss_pred CCcccccCC--CCCcccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 138 TEDDILNQV--PHNSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 138 ~~~~~~~~~--~~~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
.+..+...+ ..++||+|++... +++ .+....+.+++++|||||++++.+..
T Consensus 274 ~dlpf~~~l~~~d~sFDlVisdgs-H~~--~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 274 NDAEFLDRIARRYGPFDIVIDDGS-HIN--AHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp TCHHHHHHHHHHHCCEEEEEECSC-CCH--HHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred cccchhhhhhcccCCccEEEECCc-ccc--hhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 873221000 0468999998643 333 57788999999999999999998744
No 181
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.48 E-value=7.9e-14 Score=111.57 Aligned_cols=109 Identities=17% Similarity=0.161 Sum_probs=84.0
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcc-----cCCCceEEeccCCCcccccCCCCCccc
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLY-----DASKMNVFPCDVTEDDILNQVPHNSVD 152 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~-----~~~~i~~~~~d~~~~~~~~~~~~~~~D 152 (218)
.++.+|||||||+|..+..+++..+..+++++|+|+.+++.|++++.. ...++.++.+|+.+. ....+.++||
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~--l~~~~~~~fD 196 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAF--LKNAAEGSYD 196 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHH--HHTSCTTCEE
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHH--HHhccCCCcc
Confidence 466899999999999999999876667999999999999999988653 235799999997652 1223456899
Q ss_pred EEEechhhcCCCcch--HHHHHHHHHHhccCCeEEEEE
Q psy1107 153 IATLIFVLSAIHPNK--FSTVVKNLFIMLKSGGIILFR 188 (218)
Q Consensus 153 ~i~~~~~l~~~~~~~--~~~~l~~~~~~Lk~gG~li~~ 188 (218)
+|++.......++.. ...+++.+.++|+|||.|++.
T Consensus 197 lIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 197 AVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp EEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 999854311111121 468999999999999999985
No 182
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.47 E-value=1.2e-13 Score=109.35 Aligned_cols=111 Identities=19% Similarity=0.157 Sum_probs=82.5
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcc-----cCCCceEEeccCCCcccccCCCCCccc
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLY-----DASKMNVFPCDVTEDDILNQVPHNSVD 152 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~-----~~~~i~~~~~d~~~~~~~~~~~~~~~D 152 (218)
.++.+|||+|||+|..+..+++..+..+++++|+++.+++.+++++.. ...++.++..|+... ....+.++||
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~--~~~~~~~~fD 171 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAF--VRQTPDNTYD 171 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHH--HHSSCTTCEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHH--HHhccCCcee
Confidence 466899999999999999999876667999999999999999987631 236799999988652 1111356899
Q ss_pred EEEechhhcCCCcchH--HHHHHHHHHhccCCeEEEEEec
Q psy1107 153 IATLIFVLSAIHPNKF--STVVKNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 153 ~i~~~~~l~~~~~~~~--~~~l~~~~~~Lk~gG~li~~~~ 190 (218)
+|++.......+.... ..+++.+.++|+|||.+++...
T Consensus 172 vIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 211 (304)
T 3bwc_A 172 VVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGE 211 (304)
T ss_dssp EEEEECC---------CCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecC
Confidence 9999654433322222 5789999999999999998653
No 183
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.47 E-value=1.5e-13 Score=110.02 Aligned_cols=104 Identities=19% Similarity=0.270 Sum_probs=82.0
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccCCCCCcccEEE
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQVPHNSVDIAT 155 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~~D~i~ 155 (218)
.++.+|||+|||+|.++..+++.+ ..+|+++|++ .+++.|+++....+ .++.++.+|+.+ ..++.++||+|+
T Consensus 37 ~~~~~VLDiGcGtG~ls~~la~~g-~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~----~~~~~~~~D~Iv 110 (328)
T 1g6q_1 37 FKDKIVLDVGCGTGILSMFAAKHG-AKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLED----VHLPFPKVDIII 110 (328)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTC-CSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTT----SCCSSSCEEEEE
T ss_pred cCCCEEEEecCccHHHHHHHHHCC-CCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhh----ccCCCCcccEEE
Confidence 467899999999999999988874 3499999999 58888887755433 468999999877 345556899999
Q ss_pred echhhcCCC-cchHHHHHHHHHHhccCCeEEEE
Q psy1107 156 LIFVLSAIH-PNKFSTVVKNLFIMLKSGGIILF 187 (218)
Q Consensus 156 ~~~~l~~~~-~~~~~~~l~~~~~~Lk~gG~li~ 187 (218)
+..+.+++. ......++..+.++|+|||.++.
T Consensus 111 s~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 111 SEWMGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp ECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred EeCchhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 975544332 34677899999999999999873
No 184
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.47 E-value=1e-13 Score=106.99 Aligned_cols=107 Identities=13% Similarity=0.084 Sum_probs=86.8
Q ss_pred hhcCCCcEEEEecCCCchhHHHHhhc-CCccEEEEEeCCHHHHHHHHhCCccc-C-CCceEEeccCCCcccccCCCCCcc
Q psy1107 75 NQDVGEGVLLEVGCGVGNFIFPLLSW-SKICYIHACDISPRAVNFFKLNPLYD-A-SKMNVFPCDVTEDDILNQVPHNSV 151 (218)
Q Consensus 75 ~~~~~~~~vLDiGcG~G~~~~~~~~~-~~~~~v~~~D~s~~~~~~~~~~~~~~-~-~~i~~~~~d~~~~~~~~~~~~~~~ 151 (218)
....++.+|||+|||+|.++..++.. +|..+++++|+++.+++.++++.... + .++.+...|+.+ .+++.++|
T Consensus 92 ~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~----~~~~~~~~ 167 (258)
T 2pwy_A 92 LDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEE----AELEEAAY 167 (258)
T ss_dssp TTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGG----CCCCTTCE
T ss_pred cCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhh----cCCCCCCc
Confidence 34567889999999999999999987 66679999999999999999875443 3 578999999876 24556689
Q ss_pred cEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCC
Q psy1107 152 DIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGL 192 (218)
Q Consensus 152 D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~ 192 (218)
|+|++. .+ +...++..+.++|+|||.+++.....
T Consensus 168 D~v~~~-----~~--~~~~~l~~~~~~L~~gG~l~~~~~~~ 201 (258)
T 2pwy_A 168 DGVALD-----LM--EPWKVLEKAALALKPDRFLVAYLPNI 201 (258)
T ss_dssp EEEEEE-----SS--CGGGGHHHHHHHEEEEEEEEEEESCH
T ss_pred CEEEEC-----Cc--CHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 999973 22 44578999999999999999987543
No 185
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.47 E-value=1.6e-13 Score=103.91 Aligned_cols=104 Identities=16% Similarity=0.071 Sum_probs=82.3
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhc-CCccEEEEEeCCHHHHHHHHhCCccc------CCCceEEeccCCCcccccCCCC
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSW-SKICYIHACDISPRAVNFFKLNPLYD------ASKMNVFPCDVTEDDILNQVPH 148 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~-~~~~~v~~~D~s~~~~~~~~~~~~~~------~~~i~~~~~d~~~~~~~~~~~~ 148 (218)
...++.+|||+|||+|..+..++.. ++..+++++|+++.+++.++++.... ..++.+...|+... ....
T Consensus 74 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~----~~~~ 149 (226)
T 1i1n_A 74 QLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMG----YAEE 149 (226)
T ss_dssp TSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGC----CGGG
T ss_pred hCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccC----cccC
Confidence 3567889999999999999999876 45569999999999999998875432 24788999988652 2234
Q ss_pred CcccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 149 NSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 149 ~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
++||+|++..+++++. ..+.++|+|||.+++....
T Consensus 150 ~~fD~i~~~~~~~~~~--------~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 150 APYDAIHVGAAAPVVP--------QALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp CCEEEEEECSBBSSCC--------HHHHHTEEEEEEEEEEESC
T ss_pred CCcCEEEECCchHHHH--------HHHHHhcCCCcEEEEEEec
Confidence 5799999987776553 5678999999999997643
No 186
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.47 E-value=1.2e-13 Score=104.72 Aligned_cols=108 Identities=15% Similarity=0.088 Sum_probs=83.1
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhcC-----CccEEEEEeCCHHHHHHHHhCCcccC------CCceEEeccCCCccccc
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSWS-----KICYIHACDISPRAVNFFKLNPLYDA------SKMNVFPCDVTEDDILN 144 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~~-----~~~~v~~~D~s~~~~~~~~~~~~~~~------~~i~~~~~d~~~~~~~~ 144 (218)
...++.+|||+|||+|.++..++... |..+++++|+++.+++.++++....+ .++.+...|+.......
T Consensus 77 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 156 (227)
T 2pbf_A 77 VLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEE 156 (227)
T ss_dssp TSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHH
T ss_pred hCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhccccc
Confidence 45678899999999999999998864 45699999999999999998755432 47899999886621000
Q ss_pred CCCCCcccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 145 QVPHNSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 145 ~~~~~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
....++||+|++...++++ +..+.++|+|||.+++....
T Consensus 157 ~~~~~~fD~I~~~~~~~~~--------~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 157 KKELGLFDAIHVGASASEL--------PEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp HHHHCCEEEEEECSBBSSC--------CHHHHHHEEEEEEEEEEEEE
T ss_pred CccCCCcCEEEECCchHHH--------HHHHHHhcCCCcEEEEEEcc
Confidence 0224579999998877665 36678999999999987643
No 187
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.47 E-value=1.1e-14 Score=111.83 Aligned_cols=108 Identities=10% Similarity=0.031 Sum_probs=84.4
Q ss_pred hhcCCCcEEEEecCCCchhHHHHhhcCC-ccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccCC----C
Q psy1107 75 NQDVGEGVLLEVGCGVGNFIFPLLSWSK-ICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQV----P 147 (218)
Q Consensus 75 ~~~~~~~~vLDiGcG~G~~~~~~~~~~~-~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~----~ 147 (218)
....++.+|||+|||+|..+..++...+ ..+|+++|+++.+++.|++++...+ .++.++.+|+.+.. ..+ .
T Consensus 56 ~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l--~~~~~~~~ 133 (242)
T 3r3h_A 56 IRLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTL--HSLLNEGG 133 (242)
T ss_dssp HHHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHH--HHHHHHHC
T ss_pred HhhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHH--HHHhhccC
Confidence 3445678999999999999999998764 6799999999999888887765443 47999999876521 111 1
Q ss_pred CCcccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 148 HNSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 148 ~~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
.++||+|++... ......+++.+.++|+|||++++.+
T Consensus 134 ~~~fD~V~~d~~-----~~~~~~~l~~~~~~LkpGG~lv~d~ 170 (242)
T 3r3h_A 134 EHQFDFIFIDAD-----KTNYLNYYELALKLVTPKGLIAIDN 170 (242)
T ss_dssp SSCEEEEEEESC-----GGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCEeEEEEcCC-----hHHhHHHHHHHHHhcCCCeEEEEEC
Confidence 358999998542 3567789999999999999999865
No 188
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.46 E-value=1.2e-13 Score=108.36 Aligned_cols=109 Identities=18% Similarity=0.199 Sum_probs=84.1
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCccc-----CCCceEEeccCCCcccccCCCCCccc
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYD-----ASKMNVFPCDVTEDDILNQVPHNSVD 152 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~-----~~~i~~~~~d~~~~~~~~~~~~~~~D 152 (218)
.++.+|||+|||+|..+..+++..+..+++++|+++.+++.+++++... ..++.++..|+.+. .....++||
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~---l~~~~~~fD 153 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKF---LENVTNTYD 153 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHH---HHHCCSCEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHH---HHhCCCCce
Confidence 4568999999999999999998766679999999999999999876532 36789999987652 111245899
Q ss_pred EEEechhhcCCCcchH--HHHHHHHHHhccCCeEEEEEe
Q psy1107 153 IATLIFVLSAIHPNKF--STVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 153 ~i~~~~~l~~~~~~~~--~~~l~~~~~~Lk~gG~li~~~ 189 (218)
+|++.......+.... ..+++.+.++|+|||.+++..
T Consensus 154 ~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 192 (283)
T 2i7c_A 154 VIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 192 (283)
T ss_dssp EEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence 9998543222222222 689999999999999999874
No 189
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.45 E-value=2.3e-13 Score=110.03 Aligned_cols=113 Identities=12% Similarity=0.059 Sum_probs=88.2
Q ss_pred hhcCCCcEEEEecCCCchhHHHHhhcC-CccEEEEEeCCHHHHHHHHhCCcccC-CCceEEeccCCCcccccCCCCCccc
Q psy1107 75 NQDVGEGVLLEVGCGVGNFIFPLLSWS-KICYIHACDISPRAVNFFKLNPLYDA-SKMNVFPCDVTEDDILNQVPHNSVD 152 (218)
Q Consensus 75 ~~~~~~~~vLDiGcG~G~~~~~~~~~~-~~~~v~~~D~s~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~~~~D 152 (218)
....++.+|||+|||+|.+++.++... +..+++|+|+++.+++.|+.++...+ .++.+.+.|+.+ .+.+...||
T Consensus 199 ~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~----~~~~~~~~D 274 (354)
T 3tma_A 199 ADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARH----LPRFFPEVD 274 (354)
T ss_dssp TTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGG----GGGTCCCCS
T ss_pred hCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhh----CccccCCCC
Confidence 344677899999999999999999876 77799999999999999999876544 379999999877 233344689
Q ss_pred EEEechhhcCCCc------chHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 153 IATLIFVLSAIHP------NKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 153 ~i~~~~~l~~~~~------~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
+|+++..+..... .....++..+.++|+|||.+++....
T Consensus 275 ~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~ 319 (354)
T 3tma_A 275 RILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLR 319 (354)
T ss_dssp EEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESC
T ss_pred EEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 9999654332111 12467889999999999999998754
No 190
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.45 E-value=8.2e-14 Score=107.16 Aligned_cols=108 Identities=16% Similarity=0.089 Sum_probs=84.6
Q ss_pred hhcCCCcEEEEecCCCchhHHHHhhcCC-ccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccCC-----
Q psy1107 75 NQDVGEGVLLEVGCGVGNFIFPLLSWSK-ICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQV----- 146 (218)
Q Consensus 75 ~~~~~~~~vLDiGcG~G~~~~~~~~~~~-~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~----- 146 (218)
....++.+|||+|||+|..+..++...| ..+++++|+++.+++.+++++...+ .++.++.+|+.+.. ..+
T Consensus 75 ~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l--~~l~~~~~ 152 (247)
T 1sui_A 75 LKLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVL--DEMIKDEK 152 (247)
T ss_dssp HHHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHH--HHHHHSGG
T ss_pred HHhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHH--HHHHhccC
Confidence 3445678999999999999999998765 6799999999999999998765443 46889999876521 111
Q ss_pred CCCcccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 147 PHNSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 147 ~~~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
+.++||+|++... ......+++.+.++|+|||++++.+
T Consensus 153 ~~~~fD~V~~d~~-----~~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 153 NHGSYDFIFVDAD-----KDNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp GTTCBSEEEECSC-----STTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred CCCCEEEEEEcCc-----hHHHHHHHHHHHHhCCCCeEEEEec
Confidence 1458999998532 2467789999999999999998854
No 191
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.45 E-value=1.1e-13 Score=109.94 Aligned_cols=108 Identities=19% Similarity=0.202 Sum_probs=80.3
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCccc-----CCCceEEeccCCCcccccCCCCCccc
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYD-----ASKMNVFPCDVTEDDILNQVPHNSVD 152 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~-----~~~i~~~~~d~~~~~~~~~~~~~~~D 152 (218)
.++.+|||||||+|..+..+++..+..+++++|+++.+++.|++++... ..++.++..|+... .....++||
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~---l~~~~~~fD 183 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEF---LKNHKNEFD 183 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHH---HHHCTTCEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHH---HHhcCCCce
Confidence 4568999999999999999998766679999999999999999886532 45789999987652 111345899
Q ss_pred EEEechhhcCCCc-ch-H-HHHHHHHHHhccCCeEEEEEe
Q psy1107 153 IATLIFVLSAIHP-NK-F-STVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 153 ~i~~~~~l~~~~~-~~-~-~~~l~~~~~~Lk~gG~li~~~ 189 (218)
+|++... .++.+ .. . ..+++.+.++|+|||.+++..
T Consensus 184 ~Ii~d~~-~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 184 VIITDSS-DPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp EEEECCC--------------HHHHHHHHEEEEEEEEEEC
T ss_pred EEEEcCC-CCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 9998543 22221 11 1 688999999999999999864
No 192
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.45 E-value=2e-13 Score=106.62 Aligned_cols=110 Identities=17% Similarity=0.099 Sum_probs=83.2
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcc-----cCCCceEEeccCCCcccccCCCCCccc
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLY-----DASKMNVFPCDVTEDDILNQVPHNSVD 152 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~-----~~~~i~~~~~d~~~~~~~~~~~~~~~D 152 (218)
.++.+|||+|||+|..+..+++..+..+++++|+++.+++.|++++.. ...++.++..|+... .....++||
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~---l~~~~~~fD 150 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMH---IAKSENQYD 150 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHH---HHTCCSCEE
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHH---HhhCCCCee
Confidence 356899999999999999998875557999999999999999987632 236799999997652 112245899
Q ss_pred EEEechhhcCCCcc--hHHHHHHHHHHhccCCeEEEEEec
Q psy1107 153 IATLIFVLSAIHPN--KFSTVVKNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 153 ~i~~~~~l~~~~~~--~~~~~l~~~~~~Lk~gG~li~~~~ 190 (218)
+|++.......++. ....+++.+.++|+|||.+++...
T Consensus 151 ~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~ 190 (275)
T 1iy9_A 151 VIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTD 190 (275)
T ss_dssp EEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECC
T ss_pred EEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 99985433222111 125789999999999999998753
No 193
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.45 E-value=2.7e-13 Score=109.80 Aligned_cols=102 Identities=22% Similarity=0.271 Sum_probs=85.2
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEec
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATLI 157 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~~ 157 (218)
.+..+|||||||+|.++..+++.+|..+++++|+ +.+++.++.. .++.+..+|+.+ +++ +||+|++.
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~~v~~~~~d~~~-----~~~--~~D~v~~~ 258 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTGN-----ENLNFVGGDMFK-----SIP--SADAVLLK 258 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCCC-----SSEEEEECCTTT-----CCC--CCSEEEEE
T ss_pred cCCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhcccC-----CCcEEEeCccCC-----CCC--CceEEEEc
Confidence 4568999999999999999999988889999999 7777665532 358999998865 223 49999999
Q ss_pred hhhcCCCcchHHHHHHHHHHhccC---CeEEEEEecCC
Q psy1107 158 FVLSAIHPNKFSTVVKNLFIMLKS---GGIILFRDYGL 192 (218)
Q Consensus 158 ~~l~~~~~~~~~~~l~~~~~~Lk~---gG~li~~~~~~ 192 (218)
.++|++++.....+++++.++|+| ||.|++.++..
T Consensus 259 ~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~ 296 (358)
T 1zg3_A 259 WVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISI 296 (358)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEE
T ss_pred ccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEecc
Confidence 999999755566999999999999 99999988653
No 194
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.45 E-value=1.3e-13 Score=109.02 Aligned_cols=109 Identities=14% Similarity=0.103 Sum_probs=81.6
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcc-----cCCCceEEeccCCCcccccCCCCCccc
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLY-----DASKMNVFPCDVTEDDILNQVPHNSVD 152 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~-----~~~~i~~~~~d~~~~~~~~~~~~~~~D 152 (218)
.++.+|||||||+|..+..+++..+..+++++|+++.+++.|++++.. ...++.++..|+.+. .....++||
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~---l~~~~~~fD 170 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEF---MKQNQDAFD 170 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHH---HHTCSSCEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHH---HhhCCCCce
Confidence 456899999999999999999876667999999999999999988653 246799999987541 122345899
Q ss_pred EEEechhhcCCCcc--hHHHHHHHHHHhccCCeEEEEEe
Q psy1107 153 IATLIFVLSAIHPN--KFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 153 ~i~~~~~l~~~~~~--~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
+|++.......++. ....+++.+.++|+|||.+++..
T Consensus 171 ~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 171 VIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp EEEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 99985432211111 23468999999999999999865
No 195
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.44 E-value=1e-13 Score=102.61 Aligned_cols=108 Identities=16% Similarity=0.205 Sum_probs=77.2
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCccccc----CCC---CC
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILN----QVP---HN 149 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~----~~~---~~ 149 (218)
..++.+|||+|||+|.++..+++. ..+|+++|+++.. ...++.++++|+.+..... .+. .+
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~--~~~V~gvD~~~~~----------~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSL--ARKIISIDLQEME----------EIAGVRFIRCDIFKETIFDDIDRALREEGIE 90 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT--CSEEEEEESSCCC----------CCTTCEEEECCTTSSSHHHHHHHHHHHHTCS
T ss_pred CCCCCEEEEEeecCCHHHHHHHHc--CCcEEEEeccccc----------cCCCeEEEEccccCHHHHHHHHHHhhcccCC
Confidence 457889999999999999999887 4699999998741 1247999999998743211 011 13
Q ss_pred cccEEEechhhcCCC---c------chHHHHHHHHHHhccCCeEEEEEecCCCchh
Q psy1107 150 SVDIATLIFVLSAIH---P------NKFSTVVKNLFIMLKSGGIILFRDYGLHDMA 196 (218)
Q Consensus 150 ~~D~i~~~~~l~~~~---~------~~~~~~l~~~~~~Lk~gG~li~~~~~~~~~~ 196 (218)
+||+|++........ . .....++..+.++|||||.|++..+......
T Consensus 91 ~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~~~~~~ 146 (191)
T 3dou_A 91 KVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQGDMTN 146 (191)
T ss_dssp SEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEECSTHHH
T ss_pred cceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcCCCCHH
Confidence 899999864322111 0 1235678889999999999999887766543
No 196
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.44 E-value=1.5e-13 Score=104.74 Aligned_cols=109 Identities=16% Similarity=0.106 Sum_probs=83.4
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhcCC-ccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccCCCC--Cc
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSWSK-ICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQVPH--NS 150 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~~~-~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~--~~ 150 (218)
...++.+|||+|||+|..+..++...+ ..+++++|+++.+++.|+++....+ .++.+...|+.+.....+... ++
T Consensus 69 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~ 148 (232)
T 3cbg_A 69 SLTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPE 148 (232)
T ss_dssp HHHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCC
T ss_pred HhcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCC
Confidence 344677999999999999999998765 5799999999999999998754433 368888888654210111222 58
Q ss_pred ccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 151 VDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 151 ~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
||+|++... ......+++.+.++|+|||.+++.+
T Consensus 149 fD~V~~d~~-----~~~~~~~l~~~~~~LkpgG~lv~~~ 182 (232)
T 3cbg_A 149 FDLIFIDAD-----KRNYPRYYEIGLNLLRRGGLMVIDN 182 (232)
T ss_dssp EEEEEECSC-----GGGHHHHHHHHHHTEEEEEEEEEEC
T ss_pred cCEEEECCC-----HHHHHHHHHHHHHHcCCCeEEEEeC
Confidence 999997532 2467789999999999999999865
No 197
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.44 E-value=1.9e-13 Score=108.91 Aligned_cols=108 Identities=20% Similarity=0.265 Sum_probs=82.9
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCccc-----CCCceEEeccCCCcccccCCCCCccc
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYD-----ASKMNVFPCDVTEDDILNQVPHNSVD 152 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~-----~~~i~~~~~d~~~~~~~~~~~~~~~D 152 (218)
.++.+|||+|||+|..+..+++..+..+++++|+|+.+++.++++.... ..++.++..|+.+. .....++||
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~---l~~~~~~fD 191 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKF---LENVTNTYD 191 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHH---HHHCCSCEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHH---HhhcCCCce
Confidence 4568999999999999999998766679999999999999999886541 35789999987652 111245899
Q ss_pred EEEechhhcCCCc-chH--HHHHHHHHHhccCCeEEEEEe
Q psy1107 153 IATLIFVLSAIHP-NKF--STVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 153 ~i~~~~~l~~~~~-~~~--~~~l~~~~~~Lk~gG~li~~~ 189 (218)
+|++... ..+.+ ... ..+++.+.+.|+|||.+++..
T Consensus 192 vIi~d~~-~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 230 (321)
T 2pt6_A 192 VIIVDSS-DPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 230 (321)
T ss_dssp EEEEECC-CSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEECCc-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 9998542 12211 121 688999999999999999865
No 198
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.44 E-value=2.1e-13 Score=106.57 Aligned_cols=106 Identities=18% Similarity=0.216 Sum_probs=85.5
Q ss_pred hhcCCCcEEEEecCCCchhHHHHhhc-CCccEEEEEeCCHHHHHHHHhCCccc----CCCceEEeccCCCcccccCCCCC
Q psy1107 75 NQDVGEGVLLEVGCGVGNFIFPLLSW-SKICYIHACDISPRAVNFFKLNPLYD----ASKMNVFPCDVTEDDILNQVPHN 149 (218)
Q Consensus 75 ~~~~~~~~vLDiGcG~G~~~~~~~~~-~~~~~v~~~D~s~~~~~~~~~~~~~~----~~~i~~~~~d~~~~~~~~~~~~~ 149 (218)
....++.+|||+|||+|.++..++.. +|..+++++|+++.+++.++++.... ..++.+...|+.+ ..++.+
T Consensus 95 ~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~----~~~~~~ 170 (280)
T 1i9g_A 95 GDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLAD----SELPDG 170 (280)
T ss_dssp TTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGG----CCCCTT
T ss_pred cCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHh----cCCCCC
Confidence 34567789999999999999999885 56679999999999999999876543 3578999999876 344566
Q ss_pred cccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 150 SVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 150 ~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
+||+|++. ++ +...++..+.++|+|||.+++....
T Consensus 171 ~~D~v~~~-----~~--~~~~~l~~~~~~L~pgG~l~~~~~~ 205 (280)
T 1i9g_A 171 SVDRAVLD-----ML--APWEVLDAVSRLLVAGGVLMVYVAT 205 (280)
T ss_dssp CEEEEEEE-----SS--CGGGGHHHHHHHEEEEEEEEEEESS
T ss_pred ceeEEEEC-----Cc--CHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 89999973 22 3447889999999999999997744
No 199
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.44 E-value=1.9e-13 Score=108.72 Aligned_cols=109 Identities=15% Similarity=0.093 Sum_probs=84.4
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcc------cCCCceEEeccCCCcccccCCCCCcc
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLY------DASKMNVFPCDVTEDDILNQVPHNSV 151 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~------~~~~i~~~~~d~~~~~~~~~~~~~~~ 151 (218)
.++.+|||||||+|..+..+++..+..+++++|+++.+++.|++++.. ...++.++..|+.+. .....++|
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~---l~~~~~~f 152 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAY---LERTEERY 152 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHH---HHHCCCCE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHH---HHhcCCCc
Confidence 456899999999999999999876667999999999999999987643 136799999988652 11134589
Q ss_pred cEEEechhhcC---CCcch--HHHHHHHHHHhccCCeEEEEEe
Q psy1107 152 DIATLIFVLSA---IHPNK--FSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 152 D~i~~~~~l~~---~~~~~--~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
|+|++....+. -++.. ...+++.+.++|+|||.+++..
T Consensus 153 D~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 153 DVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp EEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred cEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 99999654433 11111 3688999999999999999864
No 200
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.43 E-value=3e-13 Score=109.45 Aligned_cols=104 Identities=19% Similarity=0.248 Sum_probs=79.9
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccCCCCCcccEE
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQVPHNSVDIA 154 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~~D~i 154 (218)
..++.+|||||||+|.++..+++.+. .+|+++|.|+ +++.|++....++ .++.++++|+.+. .++ .++|+|
T Consensus 81 ~~~~k~VLDvG~GtGiLs~~Aa~aGA-~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~----~lp-e~~Dvi 153 (376)
T 4hc4_A 81 ALRGKTVLDVGAGTGILSIFCAQAGA-RRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETV----ELP-EQVDAI 153 (376)
T ss_dssp HHTTCEEEEETCTTSHHHHHHHHTTC-SEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTC----CCS-SCEEEE
T ss_pred hcCCCEEEEeCCCccHHHHHHHHhCC-CEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeee----cCC-ccccEE
Confidence 34788999999999999988888775 3899999986 7778877655444 5799999998873 344 389999
Q ss_pred EechhhcCCC-cchHHHHHHHHHHhccCCeEEEE
Q psy1107 155 TLIFVLSAIH-PNKFSTVVKNLFIMLKSGGIILF 187 (218)
Q Consensus 155 ~~~~~l~~~~-~~~~~~~l~~~~~~Lk~gG~li~ 187 (218)
++...-..+. ......++....++|+|||.++.
T Consensus 154 vsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 154 VSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp ECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred EeecccccccccchhhhHHHHHHhhCCCCceECC
Confidence 9854433332 23677888888899999998774
No 201
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.43 E-value=2.3e-13 Score=106.40 Aligned_cols=104 Identities=14% Similarity=0.095 Sum_probs=84.6
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhc-CCccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccCCCCCccc
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSW-SKICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQVPHNSVD 152 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~-~~~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~~D 152 (218)
...++.+|||+|||+|.++..++.. +|..+++++|+++.+++.++++....+ .++.+...|+.+. ++.++||
T Consensus 109 ~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-----~~~~~~D 183 (277)
T 1o54_A 109 DVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG-----FDEKDVD 183 (277)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC-----CSCCSEE
T ss_pred CCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc-----ccCCccC
Confidence 4456789999999999999999987 667899999999999999998865443 4688888888652 4556899
Q ss_pred EEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 153 IATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 153 ~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
+|++. .+ +...++..+.++|+|||.+++....
T Consensus 184 ~V~~~-----~~--~~~~~l~~~~~~L~pgG~l~~~~~~ 215 (277)
T 1o54_A 184 ALFLD-----VP--DPWNYIDKCWEALKGGGRFATVCPT 215 (277)
T ss_dssp EEEEC-----CS--CGGGTHHHHHHHEEEEEEEEEEESS
T ss_pred EEEEC-----Cc--CHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 99973 22 4457889999999999999998753
No 202
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.43 E-value=5.2e-13 Score=106.23 Aligned_cols=112 Identities=13% Similarity=0.070 Sum_probs=84.5
Q ss_pred hhcCCCcEEEEecCCCchhHHHHhhcC-CccEEEEEeCCHHHHHHHHhCCcccC-CCceEEeccCCCcccccCCCCCccc
Q psy1107 75 NQDVGEGVLLEVGCGVGNFIFPLLSWS-KICYIHACDISPRAVNFFKLNPLYDA-SKMNVFPCDVTEDDILNQVPHNSVD 152 (218)
Q Consensus 75 ~~~~~~~~vLDiGcG~G~~~~~~~~~~-~~~~v~~~D~s~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~~~~D 152 (218)
....++.+|||+|||+|..+..++... +..+++++|+++.+++.++.+....+ .++.+++.|+.... . ..++||
T Consensus 114 l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~---~-~~~~fD 189 (315)
T 1ixk_A 114 LDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIG---E-LNVEFD 189 (315)
T ss_dssp HCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGG---G-GCCCEE
T ss_pred hCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcc---c-ccccCC
Confidence 345677899999999999999999874 34699999999999999998876544 47899999887632 1 245799
Q ss_pred EEEechh------hcCCC-------cc-------hHHHHHHHHHHhccCCeEEEEEec
Q psy1107 153 IATLIFV------LSAIH-------PN-------KFSTVVKNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 153 ~i~~~~~------l~~~~-------~~-------~~~~~l~~~~~~Lk~gG~li~~~~ 190 (218)
+|++... +.+.+ ++ ....++..+.++|||||.|++...
T Consensus 190 ~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stc 247 (315)
T 1ixk_A 190 KILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTC 247 (315)
T ss_dssp EEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred EEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 9998432 22211 01 125889999999999999999764
No 203
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.43 E-value=2.3e-13 Score=103.22 Aligned_cols=103 Identities=17% Similarity=0.128 Sum_probs=82.1
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhcCC------ccEEEEEeCCHHHHHHHHhCCccc------CCCceEEeccCCCcccc
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSWSK------ICYIHACDISPRAVNFFKLNPLYD------ASKMNVFPCDVTEDDIL 143 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~~~------~~~v~~~D~s~~~~~~~~~~~~~~------~~~i~~~~~d~~~~~~~ 143 (218)
...++.+|||+|||+|.++..++.... ..+++++|+++.+++.++++.... ..++.+...|+..
T Consensus 81 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~---- 156 (227)
T 1r18_A 81 HLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK---- 156 (227)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG----
T ss_pred hCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCccc----
Confidence 456778999999999999999987543 249999999999999999875432 2478899998865
Q ss_pred cCCCC-CcccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 144 NQVPH-NSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 144 ~~~~~-~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
.++. ++||+|++..++++++ ..+.+.|+|||.+++....
T Consensus 157 -~~~~~~~fD~I~~~~~~~~~~--------~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 157 -GYPPNAPYNAIHVGAAAPDTP--------TELINQLASGGRLIVPVGP 196 (227)
T ss_dssp -CCGGGCSEEEEEECSCBSSCC--------HHHHHTEEEEEEEEEEESC
T ss_pred -CCCcCCCccEEEECCchHHHH--------HHHHHHhcCCCEEEEEEec
Confidence 2222 5899999988887764 5678999999999997754
No 204
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.43 E-value=1.9e-13 Score=107.08 Aligned_cols=107 Identities=13% Similarity=0.059 Sum_probs=80.4
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcc-----------cCCCceEEeccCCCcccccCC
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLY-----------DASKMNVFPCDVTEDDILNQV 146 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~-----------~~~~i~~~~~d~~~~~~~~~~ 146 (218)
.++.+|||+|||+|..+..+++. +..+++++|+++.+++.|++++.. ...++.++..|+.+. ...
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~--l~~- 149 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEF--IKN- 149 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHH--HHH-
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHH--hcc-
Confidence 45689999999999999999987 667999999999999999987611 235788999887542 111
Q ss_pred CCCcccEEEechhhcCCCcch--HHHHHHHHHHhccCCeEEEEEe
Q psy1107 147 PHNSVDIATLIFVLSAIHPNK--FSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 147 ~~~~~D~i~~~~~l~~~~~~~--~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
.++||+|++.......++.. ...+++.+.++|+|||.+++..
T Consensus 150 -~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 150 -NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp -CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred -cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 45899999854422111122 2678999999999999999864
No 205
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.43 E-value=6.2e-13 Score=104.15 Aligned_cols=108 Identities=15% Similarity=0.180 Sum_probs=80.8
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeC-CHHHHHHHHhCC-----cccC------CCceEEeccCCCcc--cc
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDI-SPRAVNFFKLNP-----LYDA------SKMNVFPCDVTEDD--IL 143 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~-s~~~~~~~~~~~-----~~~~------~~i~~~~~d~~~~~--~~ 143 (218)
.++.+|||+|||+|.++..++..+. .+|+++|+ ++.+++.++.+. ...+ .++.+...|..+.. +.
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~~~-~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 156 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLAGA-DQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQ 156 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHTTC-SEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHH
T ss_pred cCCCeEEEecccccHHHHHHHHcCC-CEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHH
Confidence 4678999999999999998887653 48999999 899999999876 3222 25777766654421 10
Q ss_pred cCCCCCcccEEEechhhcCCCcchHHHHHHHHHHhcc---C--CeEEEEE
Q psy1107 144 NQVPHNSVDIATLIFVLSAIHPNKFSTVVKNLFIMLK---S--GGIILFR 188 (218)
Q Consensus 144 ~~~~~~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk---~--gG~li~~ 188 (218)
..++.++||+|++..++++. .+...++..+.++|+ | ||.+++.
T Consensus 157 ~~~~~~~fD~Ii~~dvl~~~--~~~~~ll~~l~~~Lk~~~p~~gG~l~v~ 204 (281)
T 3bzb_A 157 RCTGLQRFQVVLLADLLSFH--QAHDALLRSVKMLLALPANDPTAVALVT 204 (281)
T ss_dssp HHHSCSSBSEEEEESCCSCG--GGHHHHHHHHHHHBCCTTTCTTCEEEEE
T ss_pred hhccCCCCCEEEEeCcccCh--HHHHHHHHHHHHHhcccCCCCCCEEEEE
Confidence 00134589999998888875 578899999999999 9 9987664
No 206
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.42 E-value=5.8e-13 Score=101.84 Aligned_cols=109 Identities=17% Similarity=0.159 Sum_probs=84.3
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhcCC-ccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcc-----------
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSWSK-ICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDD----------- 141 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~~~-~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~----------- 141 (218)
...++.+|||+|||+|..+..++...+ ..+++++|+++.+++.++++....+ .++.+..+|+.+..
T Consensus 57 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~ 136 (239)
T 2hnk_A 57 KISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPS 136 (239)
T ss_dssp HHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCG
T ss_pred HhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhccccc
Confidence 345678999999999999999998865 5799999999999999998765433 34888888875421
Q ss_pred cccCCCC--CcccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 142 ILNQVPH--NSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 142 ~~~~~~~--~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
+...++. ++||+|++... ......+++.+.++|+|||.+++.+
T Consensus 137 ~~~~f~~~~~~fD~I~~~~~-----~~~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 137 WASDFAFGPSSIDLFFLDAD-----KENYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp GGTTTCCSTTCEEEEEECSC-----GGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccccccCCCCCcCEEEEeCC-----HHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 1112333 68999998643 2456788999999999999999865
No 207
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.42 E-value=2.9e-13 Score=103.45 Aligned_cols=110 Identities=19% Similarity=0.128 Sum_probs=84.7
Q ss_pred hhcCCCcEEEEecCCCchhHHHHhhcCC-ccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcc--cc-cCCCC
Q psy1107 75 NQDVGEGVLLEVGCGVGNFIFPLLSWSK-ICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDD--IL-NQVPH 148 (218)
Q Consensus 75 ~~~~~~~~vLDiGcG~G~~~~~~~~~~~-~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~--~~-~~~~~ 148 (218)
....++.+|||+|||+|..+..++...| ..+++++|+++.+++.+++++...+ .++.++.+|+.+.. +. ...+.
T Consensus 66 ~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~ 145 (237)
T 3c3y_A 66 LKLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESE 145 (237)
T ss_dssp HHHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCT
T ss_pred HHhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCC
Confidence 3445678999999999999999998765 6799999999999999998765443 36889998876521 00 00124
Q ss_pred CcccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 149 NSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 149 ~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
++||+|++.. .......+++.+.++|+|||.+++.+
T Consensus 146 ~~fD~I~~d~-----~~~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 146 GSYDFGFVDA-----DKPNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp TCEEEEEECS-----CGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCcCEEEECC-----chHHHHHHHHHHHHhcCCCeEEEEec
Confidence 5899999752 23467889999999999999988854
No 208
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.42 E-value=4e-13 Score=104.87 Aligned_cols=117 Identities=15% Similarity=0.023 Sum_probs=86.0
Q ss_pred hhcCCCcEEEEecCCCchhHHHHhhcCCc-cEEEEEeCCHHHHHHHHhCCcccC-CCceEEeccCCCcccccCCCCCccc
Q psy1107 75 NQDVGEGVLLEVGCGVGNFIFPLLSWSKI-CYIHACDISPRAVNFFKLNPLYDA-SKMNVFPCDVTEDDILNQVPHNSVD 152 (218)
Q Consensus 75 ~~~~~~~~vLDiGcG~G~~~~~~~~~~~~-~~v~~~D~s~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~~~~D 152 (218)
....++.+|||+|||+|..+..++...++ .+++++|+++.+++.++++....+ .++.+.+.|+...........++||
T Consensus 79 l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD 158 (274)
T 3ajd_A 79 LNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFD 158 (274)
T ss_dssp HCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEE
T ss_pred hCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCC
Confidence 34567889999999999999999886544 699999999999999998866544 4789999988652110000245799
Q ss_pred EEEechhhcCCC----------------cchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 153 IATLIFVLSAIH----------------PNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 153 ~i~~~~~l~~~~----------------~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
+|++........ ......++..+.++|||||.+++....
T Consensus 159 ~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs 213 (274)
T 3ajd_A 159 KILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCS 213 (274)
T ss_dssp EEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred EEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECC
Confidence 999863222110 024578999999999999999997643
No 209
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.42 E-value=2.3e-13 Score=113.88 Aligned_cols=104 Identities=21% Similarity=0.240 Sum_probs=83.1
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccCCCCCcccEE
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQVPHNSVDIA 154 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~~D~i 154 (218)
..++.+|||+|||+|.++..+++. +..+|+++|+|+ +++.|+++....+ .++.++.+|+.+. .++ ++||+|
T Consensus 156 ~~~~~~VLDiGcGtG~la~~la~~-~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~----~~~-~~fD~I 228 (480)
T 3b3j_A 156 DFKDKIVLDVGCGSGILSFFAAQA-GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEV----SLP-EQVDII 228 (480)
T ss_dssp GTTTCEEEEESCSTTHHHHHHHHT-TCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTC----CCS-SCEEEE
T ss_pred hcCCCEEEEecCcccHHHHHHHHc-CCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhC----ccC-CCeEEE
Confidence 346789999999999999988875 446999999998 8888887755443 5799999998762 333 479999
Q ss_pred EechhhcCCCcchHHHHHHHHHHhccCCeEEEE
Q psy1107 155 TLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILF 187 (218)
Q Consensus 155 ~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~ 187 (218)
++..+++++..+.....+..+.++|+|||.+++
T Consensus 229 vs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 229 ISEPMGYMLFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp ECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred EEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 998776666545666777888999999999985
No 210
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.41 E-value=3.8e-13 Score=107.99 Aligned_cols=108 Identities=14% Similarity=0.154 Sum_probs=81.2
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhc-CCccEEEEEeCCHHHHHHHHhCCccc------------CCCceEEeccCCCccc
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSW-SKICYIHACDISPRAVNFFKLNPLYD------------ASKMNVFPCDVTEDDI 142 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~-~~~~~v~~~D~s~~~~~~~~~~~~~~------------~~~i~~~~~d~~~~~~ 142 (218)
...++.+|||+|||+|.++..++.. ++..+++++|+++.+++.|+++.... ..++.+...|+.+..
T Consensus 102 ~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~- 180 (336)
T 2b25_A 102 DINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGAT- 180 (336)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC-
T ss_pred CCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcc-
Confidence 4567889999999999999999987 67679999999999999999875431 257999999987631
Q ss_pred ccCCCCCcccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCC
Q psy1107 143 LNQVPHNSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGL 192 (218)
Q Consensus 143 ~~~~~~~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~ 192 (218)
..++.++||+|++... ....++..+.++|+|||.|++.....
T Consensus 181 -~~~~~~~fD~V~~~~~-------~~~~~l~~~~~~LkpgG~lv~~~~~~ 222 (336)
T 2b25_A 181 -EDIKSLTFDAVALDML-------NPHVTLPVFYPHLKHGGVCAVYVVNI 222 (336)
T ss_dssp --------EEEEEECSS-------STTTTHHHHGGGEEEEEEEEEEESSH
T ss_pred -cccCCCCeeEEEECCC-------CHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 1345568999998421 22237899999999999999877543
No 211
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.41 E-value=5.1e-13 Score=100.69 Aligned_cols=103 Identities=14% Similarity=0.154 Sum_probs=84.0
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEec
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATLI 157 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~~ 157 (218)
.++.+|||+|||.|.++..+. +...|+++|+++.+++.++.+....+.+..+..+|... .+. .+++|+|++.
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~----~~~-~~~~DvvLll 175 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLC----APP-AEAGDLALIF 175 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTT----SCC-CCBCSEEEEE
T ss_pred CCCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeccc----CCC-CCCcchHHHH
Confidence 678899999999999998887 56799999999999999999876666788899999876 333 4489999999
Q ss_pred hhhcCCCcchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 158 FVLSAIHPNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 158 ~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
-+++++........+ .+...|+++|.++-..
T Consensus 176 k~lh~LE~q~~~~~~-~ll~aL~~~~vvVsfP 206 (253)
T 3frh_A 176 KLLPLLEREQAGSAM-ALLQSLNTPRMAVSFP 206 (253)
T ss_dssp SCHHHHHHHSTTHHH-HHHHHCBCSEEEEEEE
T ss_pred HHHHHhhhhchhhHH-HHHHHhcCCCEEEEcC
Confidence 888888644444555 7778999999776644
No 212
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.41 E-value=4.6e-13 Score=105.65 Aligned_cols=109 Identities=12% Similarity=0.103 Sum_probs=81.0
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcc-----cCCCceEEeccCCCcccccCCCCCccc
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLY-----DASKMNVFPCDVTEDDILNQVPHNSVD 152 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~-----~~~~i~~~~~d~~~~~~~~~~~~~~~D 152 (218)
.++.+|||+|||+|..+..+++..+..+++++|+++.+++.+++++.. ...++.++..|+... .....++||
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~---l~~~~~~fD 165 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEY---VRKFKNEFD 165 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHH---GGGCSSCEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHH---HhhCCCCce
Confidence 456899999999999999999875667999999999999999988642 136799999987552 112245899
Q ss_pred EEEechhhcCCCc-c--hHHHHHHHHHHhccCCeEEEEEe
Q psy1107 153 IATLIFVLSAIHP-N--KFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 153 ~i~~~~~l~~~~~-~--~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
+|++.....+..+ . ....+++.+.++|+|||.+++..
T Consensus 166 ~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 205 (296)
T 1inl_A 166 VIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET 205 (296)
T ss_dssp EEEEEC----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 9998532110211 0 22678999999999999999864
No 213
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.40 E-value=3.4e-13 Score=102.32 Aligned_cols=108 Identities=13% Similarity=0.110 Sum_probs=84.3
Q ss_pred hhcCCCcEEEEecCCCchhHHHHhhcCC-ccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccCCC----
Q psy1107 75 NQDVGEGVLLEVGCGVGNFIFPLLSWSK-ICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQVP---- 147 (218)
Q Consensus 75 ~~~~~~~~vLDiGcG~G~~~~~~~~~~~-~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~---- 147 (218)
....++.+|||+|||+|..+..++...+ ..+++++|+++.+++.+++++...+ .++.++..|+.+.. ..++
T Consensus 65 ~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~--~~~~~~~~ 142 (229)
T 2avd_A 65 ARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETL--DELLAAGE 142 (229)
T ss_dssp HHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHH--HHHHHTTC
T ss_pred HHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHH--HHHHhcCC
Confidence 3445778999999999999999998755 5799999999999999998765433 47899999875421 1111
Q ss_pred CCcccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 148 HNSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 148 ~~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
.++||+|++... ......+++.+.++|+|||.+++.+
T Consensus 143 ~~~~D~v~~d~~-----~~~~~~~l~~~~~~L~pgG~lv~~~ 179 (229)
T 2avd_A 143 AGTFDVAVVDAD-----KENCSAYYERCLQLLRPGGILAVLR 179 (229)
T ss_dssp TTCEEEEEECSC-----STTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCccEEEECCC-----HHHHHHHHHHHHHHcCCCeEEEEEC
Confidence 158999998432 3467789999999999999999865
No 214
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.39 E-value=8.5e-13 Score=103.50 Aligned_cols=104 Identities=17% Similarity=0.203 Sum_probs=80.2
Q ss_pred CCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccCCCCCcc---cE
Q psy1107 79 GEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQVPHNSV---DI 153 (218)
Q Consensus 79 ~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~~---D~ 153 (218)
++.+|||+|||+|.++..++.. |..+++++|+|+.+++.|+.+....+ .++.++++|+.+. ++ ++| |+
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~-----~~-~~f~~~D~ 195 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP-----FK-EKFASIEM 195 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG-----GG-GGTTTCCE
T ss_pred CCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhh-----cc-cccCCCCE
Confidence 5679999999999999999988 77899999999999999999876544 2499999998762 11 368 99
Q ss_pred EEechhhc-----------CCCc------chHHHHHHHHH-HhccCCeEEEEEe
Q psy1107 154 ATLIFVLS-----------AIHP------NKFSTVVKNLF-IMLKSGGIILFRD 189 (218)
Q Consensus 154 i~~~~~l~-----------~~~~------~~~~~~l~~~~-~~Lk~gG~li~~~ 189 (218)
|+++-... |-|. .+...+++.+. +.|+|||.+++..
T Consensus 196 IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~ 249 (284)
T 1nv8_A 196 ILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEI 249 (284)
T ss_dssp EEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEEC
T ss_pred EEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEE
Confidence 99962111 1110 11226889999 9999999998844
No 215
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.38 E-value=3.8e-13 Score=107.67 Aligned_cols=110 Identities=11% Similarity=-0.062 Sum_probs=80.8
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC-C--CceEEeccCCCcccccCCCCCcccEE
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA-S--KMNVFPCDVTEDDILNQVPHNSVDIA 154 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~-~--~i~~~~~d~~~~~~~~~~~~~~~D~i 154 (218)
.++.+|||+|||+|.++..++..+. +|+++|+|+.+++.+++++...+ . ++.+++.|+.+..........+||+|
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~ga--~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~I 229 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAAGA--EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDII 229 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHTTC--EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEE
T ss_pred CCCCcEEEcccccCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEE
Confidence 4567999999999999999998763 99999999999999999866544 2 48899998865210000013479999
Q ss_pred EechhhcCCC--------cchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 155 TLIFVLSAIH--------PNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 155 ~~~~~l~~~~--------~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
++.-...... ..+...++..+.++|+|||.+++..
T Consensus 230 i~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~ 272 (332)
T 2igt_A 230 LTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLT 272 (332)
T ss_dssp EECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEE
T ss_pred EECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEE
Confidence 9843211110 1356788999999999999977754
No 216
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.38 E-value=3.6e-12 Score=106.13 Aligned_cols=117 Identities=13% Similarity=0.079 Sum_probs=88.1
Q ss_pred hhcCCCcEEEEecCCCchhHHHHhhcCCc-cEEEEEeCCHHHHHHHHhCCcccC-CCceEEeccCCCcccccCCCCCccc
Q psy1107 75 NQDVGEGVLLEVGCGVGNFIFPLLSWSKI-CYIHACDISPRAVNFFKLNPLYDA-SKMNVFPCDVTEDDILNQVPHNSVD 152 (218)
Q Consensus 75 ~~~~~~~~vLDiGcG~G~~~~~~~~~~~~-~~v~~~D~s~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~~~~D 152 (218)
....++.+|||+|||+|..+..++...++ .+++++|+++.+++.++.+....+ .++.+.+.|+.... ..++.++||
T Consensus 255 l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~--~~~~~~~fD 332 (450)
T 2yxl_A 255 LDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAP--EIIGEEVAD 332 (450)
T ss_dssp HCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCS--SSSCSSCEE
T ss_pred cCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcc--hhhccCCCC
Confidence 34567789999999999999999987554 699999999999999998866544 47899999987621 124446899
Q ss_pred EEEec------hhhcCCCc-------ch-------HHHHHHHHHHhccCCeEEEEEecCCC
Q psy1107 153 IATLI------FVLSAIHP-------NK-------FSTVVKNLFIMLKSGGIILFRDYGLH 193 (218)
Q Consensus 153 ~i~~~------~~l~~~~~-------~~-------~~~~l~~~~~~Lk~gG~li~~~~~~~ 193 (218)
+|++. .+++..|. ++ ...++..+.++|||||.|++.+....
T Consensus 333 ~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~ 393 (450)
T 2yxl_A 333 KVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIF 393 (450)
T ss_dssp EEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCC
T ss_pred EEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCC
Confidence 99962 23333321 11 25789999999999999998775443
No 217
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.38 E-value=2.1e-12 Score=98.99 Aligned_cols=103 Identities=16% Similarity=0.103 Sum_probs=82.0
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccCCCCCcccE
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQVPHNSVDI 153 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~~D~ 153 (218)
...++.+|||+|||+|.++..++.. ..+++++|+++.+++.++++....+ .++.+...|+.+. ..+.++||+
T Consensus 88 ~~~~~~~vldiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~----~~~~~~~D~ 161 (248)
T 2yvl_A 88 NLNKEKRVLEFGTGSGALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDA----EVPEGIFHA 161 (248)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTS----CCCTTCBSE
T ss_pred CCCCCCEEEEeCCCccHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhc----ccCCCcccE
Confidence 3457789999999999999999887 3699999999999999998754433 5788888888662 114458999
Q ss_pred EEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 154 ATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 154 i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
|++. .+ +...++..+.++|+|||.+++....
T Consensus 162 v~~~-----~~--~~~~~l~~~~~~L~~gG~l~~~~~~ 192 (248)
T 2yvl_A 162 AFVD-----VR--EPWHYLEKVHKSLMEGAPVGFLLPT 192 (248)
T ss_dssp EEEC-----SS--CGGGGHHHHHHHBCTTCEEEEEESS
T ss_pred EEEC-----Cc--CHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 9973 22 4457889999999999999998754
No 218
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.37 E-value=2e-12 Score=95.58 Aligned_cols=108 Identities=15% Similarity=0.139 Sum_probs=77.0
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCc---------cEEEEEeCCHHHHHHHHhCCcccCCCceEE-eccCCCcccc---
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKI---------CYIHACDISPRAVNFFKLNPLYDASKMNVF-PCDVTEDDIL--- 143 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~---------~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~-~~d~~~~~~~--- 143 (218)
..++.+|||+|||+|.++..++...+. .+++++|+++.. ...++.+. ..|+......
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~----------~~~~~~~~~~~d~~~~~~~~~~ 89 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF----------PLEGATFLCPADVTDPRTSQRI 89 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC----------CCTTCEEECSCCTTSHHHHHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc----------cCCCCeEEEeccCCCHHHHHHH
Confidence 456789999999999999999987543 699999999832 11357788 8887653211
Q ss_pred -cCCCCCcccEEEechhhcCCCc--chH-------HHHHHHHHHhccCCeEEEEEecCCCc
Q psy1107 144 -NQVPHNSVDIATLIFVLSAIHP--NKF-------STVVKNLFIMLKSGGIILFRDYGLHD 194 (218)
Q Consensus 144 -~~~~~~~~D~i~~~~~l~~~~~--~~~-------~~~l~~~~~~Lk~gG~li~~~~~~~~ 194 (218)
..++..+||+|++...++.... .+. ..++..+.++|+|||.|++..+....
T Consensus 90 ~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~~ 150 (196)
T 2nyu_A 90 LEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQ 150 (196)
T ss_dssp HHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSGG
T ss_pred HHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCcc
Confidence 1133458999998654433210 111 47889999999999999998876554
No 219
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.37 E-value=1.2e-12 Score=102.28 Aligned_cols=100 Identities=12% Similarity=0.201 Sum_probs=71.7
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCce-EEeccCCCcccccCCCCCcccEEEe
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMN-VFPCDVTEDDILNQVPHNSVDIATL 156 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~-~~~~d~~~~~~~~~~~~~~~D~i~~ 156 (218)
.++.+|||+|||+|.++..+++.+. .+|+++|+|+.+++.+.++. .++. +...++.... ...++..+||+|++
T Consensus 84 ~~g~~vLDiGcGTG~~t~~L~~~ga-~~V~aVDvs~~mL~~a~r~~----~rv~~~~~~ni~~l~-~~~l~~~~fD~v~~ 157 (291)
T 3hp7_A 84 VEDMITIDIGASTGGFTDVMLQNGA-KLVYAVDVGTNQLVWKLRQD----DRVRSMEQYNFRYAE-PVDFTEGLPSFASI 157 (291)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC-SEEEEECSSSSCSCHHHHTC----TTEEEECSCCGGGCC-GGGCTTCCCSEEEE
T ss_pred ccccEEEecCCCccHHHHHHHhCCC-CEEEEEECCHHHHHHHHHhC----cccceecccCceecc-hhhCCCCCCCEEEE
Confidence 3567999999999999998887743 49999999999998855431 1222 2223332211 12244446999998
Q ss_pred chhhcCCCcchHHHHHHHHHHhccCCeEEEEE
Q psy1107 157 IFVLSAIHPNKFSTVVKNLFIMLKSGGIILFR 188 (218)
Q Consensus 157 ~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~ 188 (218)
..+++++ ..++..+.++|+|||.+++.
T Consensus 158 d~sf~sl-----~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 158 DVSFISL-----NLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp CCSSSCG-----GGTHHHHHHHSCTTCEEEEE
T ss_pred EeeHhhH-----HHHHHHHHHHcCcCCEEEEE
Confidence 7666544 57899999999999999997
No 220
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.37 E-value=3.5e-12 Score=94.73 Aligned_cols=97 Identities=19% Similarity=0.169 Sum_probs=72.7
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEe
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATL 156 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~ 156 (218)
..++.+|||+|||+|.++..++..+ ..+++++|+|+.+++.++.+.. ++.++++|+.+. + ++||+|++
T Consensus 49 ~~~~~~vlD~gcG~G~~~~~l~~~~-~~~v~~vD~~~~~~~~a~~~~~----~~~~~~~d~~~~------~-~~~D~v~~ 116 (200)
T 1ne2_A 49 NIGGRSVIDAGTGNGILACGSYLLG-AESVTAFDIDPDAIETAKRNCG----GVNFMVADVSEI------S-GKYDTWIM 116 (200)
T ss_dssp SSBTSEEEEETCTTCHHHHHHHHTT-BSEEEEEESCHHHHHHHHHHCT----TSEEEECCGGGC------C-CCEEEEEE
T ss_pred CCCCCEEEEEeCCccHHHHHHHHcC-CCEEEEEECCHHHHHHHHHhcC----CCEEEECcHHHC------C-CCeeEEEE
Confidence 3467899999999999999998773 3479999999999999998765 788999998661 2 48999999
Q ss_pred chhhcCCCcchHHHHHHHHHHhccCCeEEEE
Q psy1107 157 IFVLSAIHPNKFSTVVKNLFIMLKSGGIILF 187 (218)
Q Consensus 157 ~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~ 187 (218)
..++++........++..+.+.+ |+++++
T Consensus 117 ~~p~~~~~~~~~~~~l~~~~~~~--g~~~~~ 145 (200)
T 1ne2_A 117 NPPFGSVVKHSDRAFIDKAFETS--MWIYSI 145 (200)
T ss_dssp CCCC-------CHHHHHHHHHHE--EEEEEE
T ss_pred CCCchhccCchhHHHHHHHHHhc--CcEEEE
Confidence 98888775433457888888888 443333
No 221
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.35 E-value=2.4e-12 Score=100.10 Aligned_cols=107 Identities=15% Similarity=0.278 Sum_probs=84.1
Q ss_pred HhhhcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccCCCCCc
Q psy1107 73 FVNQDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQVPHNS 150 (218)
Q Consensus 73 ~~~~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~ 150 (218)
+.....++.+|||+|||+|.+++.++..+. .+|+++|+|+.+++.++.++..++ .++.++++|..+. .+.+.
T Consensus 119 i~~~~~~g~~VlD~~aG~G~~~i~~a~~g~-~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~-----~~~~~ 192 (278)
T 3k6r_A 119 MAKVAKPDELVVDMFAGIGHLSLPIAVYGK-AKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDF-----PGENI 192 (278)
T ss_dssp HHHHCCTTCEEEETTCTTTTTTHHHHHHTC-CEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTC-----CCCSC
T ss_pred HHHhcCCCCEEEEecCcCcHHHHHHHHhcC-CeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHh-----ccccC
Confidence 334467889999999999999999998763 589999999999999999877655 4688999998662 23458
Q ss_pred ccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 151 VDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 151 ~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
||.|++.. | .....++..+.++||+||.+.+.++.
T Consensus 193 ~D~Vi~~~-----p-~~~~~~l~~a~~~lk~gG~ih~~~~~ 227 (278)
T 3k6r_A 193 ADRILMGY-----V-VRTHEFIPKALSIAKDGAIIHYHNTV 227 (278)
T ss_dssp EEEEEECC-----C-SSGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred CCEEEECC-----C-CcHHHHHHHHHHHcCCCCEEEEEeee
Confidence 99998642 2 23346788889999999998876543
No 222
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.35 E-value=4e-12 Score=105.25 Aligned_cols=115 Identities=16% Similarity=0.094 Sum_probs=87.7
Q ss_pred hhcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEE
Q psy1107 75 NQDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIA 154 (218)
Q Consensus 75 ~~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i 154 (218)
....++.+|||+|||+|..+..++...++.+++++|+++.+++.++.+....+.++.+.+.|+.... ..++.++||+|
T Consensus 242 l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~--~~~~~~~fD~V 319 (429)
T 1sqg_A 242 LAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPS--QWCGEQQFDRI 319 (429)
T ss_dssp HCCCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTH--HHHTTCCEEEE
T ss_pred cCCCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhch--hhcccCCCCEE
Confidence 3456778999999999999999998877679999999999999999887655556788888887632 11344689999
Q ss_pred Eec------hhhcCCCc-------ch-------HHHHHHHHHHhccCCeEEEEEecC
Q psy1107 155 TLI------FVLSAIHP-------NK-------FSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 155 ~~~------~~l~~~~~-------~~-------~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
++. .++++.+. ++ +..++..+.++|||||.|++.+..
T Consensus 320 l~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs 376 (429)
T 1sqg_A 320 LLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCS 376 (429)
T ss_dssp EEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESC
T ss_pred EEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 962 23333321 11 257899999999999999997633
No 223
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.35 E-value=4.3e-13 Score=103.43 Aligned_cols=82 Identities=12% Similarity=0.018 Sum_probs=63.2
Q ss_pred CCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccCCC---CCcccE
Q psy1107 79 GEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQVP---HNSVDI 153 (218)
Q Consensus 79 ~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~---~~~~D~ 153 (218)
++.+|||+|||+|.++..++...+..+++++|+|+.+++.|+.+....+ .++.+++.|+.+.. ...++ +++||+
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~~~~~~~fD~ 143 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLL-MDALKEESEIIYDF 143 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSS-TTTSTTCCSCCBSE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhh-hhhhhcccCCcccE
Confidence 5679999999999999999887655799999999999999998865444 35899999876521 11333 258999
Q ss_pred EEechhhc
Q psy1107 154 ATLIFVLS 161 (218)
Q Consensus 154 i~~~~~l~ 161 (218)
|++...++
T Consensus 144 i~~npp~~ 151 (254)
T 2h00_A 144 CMCNPPFF 151 (254)
T ss_dssp EEECCCCC
T ss_pred EEECCCCc
Confidence 99975433
No 224
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.34 E-value=4.2e-12 Score=103.69 Aligned_cols=111 Identities=15% Similarity=0.166 Sum_probs=81.2
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEec
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATLI 157 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~~ 157 (218)
.++.+|||+|||+|.++..++..+. .|+++|+|+.+++.+++++..++....+.+.|+.+. ...... .||+|++.
T Consensus 213 ~~g~~VLDlg~GtG~~sl~~a~~ga--~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~--l~~~~~-~fD~Ii~d 287 (393)
T 4dmg_A 213 RPGERVLDVYSYVGGFALRAARKGA--YALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPT--LRGLEG-PFHHVLLD 287 (393)
T ss_dssp CTTCEEEEESCTTTHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHH--HHTCCC-CEEEEEEC
T ss_pred cCCCeEEEcccchhHHHHHHHHcCC--eEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHH--HHHhcC-CCCEEEEC
Confidence 3488999999999999999998764 599999999999999998765554445667777652 112233 49999985
Q ss_pred hhhcCCCc-------chHHHHHHHHHHhccCCeEEEEEecCCC
Q psy1107 158 FVLSAIHP-------NKFSTVVKNLFIMLKSGGIILFRDYGLH 193 (218)
Q Consensus 158 ~~l~~~~~-------~~~~~~l~~~~~~Lk~gG~li~~~~~~~ 193 (218)
.....-.. .....++..+.++|+|||.|++.+....
T Consensus 288 pP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~~ 330 (393)
T 4dmg_A 288 PPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSYH 330 (393)
T ss_dssp CCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCTT
T ss_pred CCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCC
Confidence 32111000 2456788899999999999997664433
No 225
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.34 E-value=1.3e-11 Score=91.99 Aligned_cols=101 Identities=19% Similarity=0.195 Sum_probs=79.0
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEe
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATL 156 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~ 156 (218)
..++.+|||+|||+|.++..++..+. .+++++|+++.+++.++.+....+.++.++++|+.+. + .+||+|++
T Consensus 47 ~~~~~~vlD~g~G~G~~~~~l~~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~------~-~~~D~v~~ 118 (207)
T 1wy7_A 47 DIEGKVVADLGAGTGVLSYGALLLGA-KEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEF------N-SRVDIVIM 118 (207)
T ss_dssp SSTTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGC------C-CCCSEEEE
T ss_pred CCCcCEEEEeeCCCCHHHHHHHHcCC-CEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHHc------C-CCCCEEEE
Confidence 34678999999999999999988754 3899999999999999998765545789999988662 2 37999999
Q ss_pred chhhcCCCcchHHHHHHHHHHhccCCeEEEE
Q psy1107 157 IFVLSAIHPNKFSTVVKNLFIMLKSGGIILF 187 (218)
Q Consensus 157 ~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~ 187 (218)
...++.........+++.+.+++ ||.+++
T Consensus 119 ~~p~~~~~~~~~~~~l~~~~~~l--~~~~~~ 147 (207)
T 1wy7_A 119 NPPFGSQRKHADRPFLLKAFEIS--DVVYSI 147 (207)
T ss_dssp CCCCSSSSTTTTHHHHHHHHHHC--SEEEEE
T ss_pred cCCCccccCCchHHHHHHHHHhc--CcEEEE
Confidence 87766654344557788888887 554443
No 226
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.33 E-value=1.9e-12 Score=104.22 Aligned_cols=108 Identities=13% Similarity=0.205 Sum_probs=83.6
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCc-----cEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcc
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKI-----CYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSV 151 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~-----~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~ 151 (218)
..++.+|||+|||+|.++..+++..+. .+++|+|+++.+++.|+.+....+.++.+.++|.... .+..+|
T Consensus 128 ~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~~-----~~~~~f 202 (344)
T 2f8l_A 128 KKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLAN-----LLVDPV 202 (344)
T ss_dssp TCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTSC-----CCCCCE
T ss_pred CCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCCc-----cccCCc
Confidence 345689999999999999998876542 6899999999999999987654444688888887652 234589
Q ss_pred cEEEechhhcCCCcch---------------H-HHHHHHHHHhccCCeEEEEEe
Q psy1107 152 DIATLIFVLSAIHPNK---------------F-STVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 152 D~i~~~~~l~~~~~~~---------------~-~~~l~~~~~~Lk~gG~li~~~ 189 (218)
|+|+++-.+.+++.++ . ..++..+.+.|+|||.+++..
T Consensus 203 D~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~ 256 (344)
T 2f8l_A 203 DVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLV 256 (344)
T ss_dssp EEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEE
Confidence 9999987655443211 1 258899999999999998876
No 227
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.32 E-value=4.6e-12 Score=103.09 Aligned_cols=105 Identities=13% Similarity=0.039 Sum_probs=81.7
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC-CCceEEeccCCCcccccC-CCCCcccEEE
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA-SKMNVFPCDVTEDDILNQ-VPHNSVDIAT 155 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~-~~~~~~D~i~ 155 (218)
.++.+|||+| |+|.++..++..++..+++++|+++.+++.|++++...+ .++.++.+|+.+. .+ ...++||+|+
T Consensus 171 ~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~---l~~~~~~~fD~Vi 246 (373)
T 2qm3_A 171 LENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKP---LPDYALHKFDTFI 246 (373)
T ss_dssp STTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSC---CCTTTSSCBSEEE
T ss_pred CCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhh---chhhccCCccEEE
Confidence 3578999999 999999999888776799999999999999999866544 3799999998761 11 1235899999
Q ss_pred echhhcCCCcchHHHHHHHHHHhccCCeEE-EEEe
Q psy1107 156 LIFVLSAIHPNKFSTVVKNLFIMLKSGGII-LFRD 189 (218)
Q Consensus 156 ~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~l-i~~~ 189 (218)
+..+++.. ....++..+.++|+|||.+ ++..
T Consensus 247 ~~~p~~~~---~~~~~l~~~~~~LkpgG~~~~~~~ 278 (373)
T 2qm3_A 247 TDPPETLE---AIRAFVGRGIATLKGPRCAGYFGI 278 (373)
T ss_dssp ECCCSSHH---HHHHHHHHHHHTBCSTTCEEEEEE
T ss_pred ECCCCchH---HHHHHHHHHHHHcccCCeEEEEEE
Confidence 87543322 3578899999999999944 4443
No 228
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.32 E-value=1.4e-12 Score=106.43 Aligned_cols=114 Identities=11% Similarity=0.076 Sum_probs=83.6
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC-C--CceEEeccCCCcccccCCCCCcccEE
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA-S--KMNVFPCDVTEDDILNQVPHNSVDIA 154 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~-~--~i~~~~~d~~~~~~~~~~~~~~~D~i 154 (218)
.++.+|||+|||+|.++..++..+. .+|+++|+|+.+++.|++++..++ . ++.++++|+.+..-.......+||+|
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga-~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~I 289 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGA-MATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDII 289 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTB-SEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEE
Confidence 5678999999999999999987652 389999999999999999876554 2 78999999865210001113479999
Q ss_pred Eechhh-----cCCC--cchHHHHHHHHHHhccCCeEEEEEecCC
Q psy1107 155 TLIFVL-----SAIH--PNKFSTVVKNLFIMLKSGGIILFRDYGL 192 (218)
Q Consensus 155 ~~~~~l-----~~~~--~~~~~~~l~~~~~~Lk~gG~li~~~~~~ 192 (218)
++.-.. .... ......++..+.++|+|||.|++.....
T Consensus 290 i~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~ 334 (385)
T 2b78_A 290 IIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAA 334 (385)
T ss_dssp EECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred EECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 985332 1221 1234567788899999999999977543
No 229
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.31 E-value=4.2e-12 Score=98.33 Aligned_cols=96 Identities=13% Similarity=0.031 Sum_probs=77.5
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcc-----cCCCceEEeccCCCcccccCCCCCccc
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLY-----DASKMNVFPCDVTEDDILNQVPHNSVD 152 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~-----~~~~i~~~~~d~~~~~~~~~~~~~~~D 152 (218)
.++.+|||||||+|..+..+++. + .+++++|+++.+++.|+++... ...++.++..|.... . ++||
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~-----~--~~fD 141 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLD-----I--KKYD 141 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSC-----C--CCEE
T ss_pred CCCCEEEEEeCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHH-----H--hhCC
Confidence 35679999999999999999887 6 7999999999999999987643 135788888887651 1 5899
Q ss_pred EEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 153 IATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 153 ~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
+|++. .+ ++..+++.+.+.|+|||.+++..
T Consensus 142 ~Ii~d-----~~--dp~~~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 142 LIFCL-----QE--PDIHRIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp EEEES-----SC--CCHHHHHHHHTTEEEEEEEEEEE
T ss_pred EEEEC-----CC--ChHHHHHHHHHhcCCCcEEEEEc
Confidence 99985 21 23348999999999999999854
No 230
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.31 E-value=2.1e-12 Score=100.65 Aligned_cols=107 Identities=14% Similarity=0.062 Sum_probs=74.9
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCc---ccCCCceEE--eccCCCcccccCCCCCcc
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPL---YDASKMNVF--PCDVTEDDILNQVPHNSV 151 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~---~~~~~i~~~--~~d~~~~~~~~~~~~~~~ 151 (218)
..++.+|||+|||+|.++..+++. .+|+|+|+++ ++..++.... ..+.++.++ ++|+.. ++.++|
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~---~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~------l~~~~f 149 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ---PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTK------MEPFQA 149 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS---TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGG------CCCCCC
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc---CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhh------CCCCCc
Confidence 456789999999999999999876 4899999998 4332222211 111267888 888765 235689
Q ss_pred cEEEechhhcCCCc---chH--HHHHHHHHHhccCCe--EEEEEecCCCc
Q psy1107 152 DIATLIFVLSAIHP---NKF--STVVKNLFIMLKSGG--IILFRDYGLHD 194 (218)
Q Consensus 152 D~i~~~~~l~~~~~---~~~--~~~l~~~~~~Lk~gG--~li~~~~~~~~ 194 (218)
|+|+|..+ .+.+. +.. ..++..+.++|+||| .|++..+.+..
T Consensus 150 D~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~~~~ 198 (276)
T 2wa2_A 150 DTVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLNPYS 198 (276)
T ss_dssp SEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESCCCS
T ss_pred CEEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCCCCc
Confidence 99999766 33221 111 137888999999999 99997776443
No 231
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.31 E-value=3.5e-12 Score=104.13 Aligned_cols=116 Identities=17% Similarity=0.111 Sum_probs=85.6
Q ss_pred HhhhcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC-CCceEEeccCCCcccccCCCCCcc
Q psy1107 73 FVNQDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA-SKMNVFPCDVTEDDILNQVPHNSV 151 (218)
Q Consensus 73 ~~~~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~~~~ 151 (218)
.+... ++.+|||+|||+|.++..++.. ..+++++|+|+.+++.++.++..++ .++.+++.|+.+..........+|
T Consensus 204 ~~~~~-~~~~VLDlg~G~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~f 280 (382)
T 1wxx_A 204 YMERF-RGERALDVFSYAGGFALHLALG--FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERF 280 (382)
T ss_dssp HGGGC-CEEEEEEETCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCE
T ss_pred HHHhc-CCCeEEEeeeccCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCe
Confidence 33444 7789999999999999999887 3599999999999999999876554 458999998865211000113589
Q ss_pred cEEEechhhcCCCc-------chHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 152 DIATLIFVLSAIHP-------NKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 152 D~i~~~~~l~~~~~-------~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
|+|++.-.....+. .....++..+.++|+|||.|++....
T Consensus 281 D~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 327 (382)
T 1wxx_A 281 DLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCS 327 (382)
T ss_dssp EEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred eEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 99998432211111 34567889999999999999998754
No 232
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.31 E-value=4.7e-12 Score=103.83 Aligned_cols=115 Identities=16% Similarity=0.063 Sum_probs=85.7
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCC---CceEEeccCCCcccccCCCCCcccE
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDAS---KMNVFPCDVTEDDILNQVPHNSVDI 153 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~---~i~~~~~d~~~~~~~~~~~~~~~D~ 153 (218)
..++.+|||+|||+|.++..++..+ ..+|+++|+|+.+++.+++++..++. ++.++..|+.+..........+||+
T Consensus 218 ~~~~~~VLDl~cG~G~~sl~la~~g-~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~ 296 (396)
T 3c0k_A 218 YVENKRVLNCFSYTGGFAVSALMGG-CSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDV 296 (396)
T ss_dssp HCTTCEEEEESCTTCSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred hhCCCeEEEeeccCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCE
Confidence 3577899999999999999999875 34999999999999999998765543 7899999986621100001347999
Q ss_pred EEechhhcCCC-------cchHHHHHHHHHHhccCCeEEEEEecCC
Q psy1107 154 ATLIFVLSAIH-------PNKFSTVVKNLFIMLKSGGIILFRDYGL 192 (218)
Q Consensus 154 i~~~~~l~~~~-------~~~~~~~l~~~~~~Lk~gG~li~~~~~~ 192 (218)
|++.-.....+ ......++..+.++|+|||.+++.....
T Consensus 297 Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 342 (396)
T 3c0k_A 297 IVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSG 342 (396)
T ss_dssp EEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred EEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 99853211110 1467788999999999999999977443
No 233
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.30 E-value=8.7e-12 Score=94.88 Aligned_cols=99 Identities=10% Similarity=0.137 Sum_probs=66.2
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCccc----CCCceEEeccCCCcccccCCCCCccc
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYD----ASKMNVFPCDVTEDDILNQVPHNSVD 152 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~----~~~i~~~~~d~~~~~~~~~~~~~~~D 152 (218)
..++.+|||+|||+|.++..+++.+. .+|+|+|+|+.+++.++++.... ..++.+... ..++...+|
T Consensus 35 ~~~g~~VLDiGcGtG~~t~~la~~g~-~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~d 105 (232)
T 3opn_A 35 EINGKTCLDIGSSTGGFTDVMLQNGA-KLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVL--------ADFEQGRPS 105 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTTC-SEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCG--------GGCCSCCCS
T ss_pred CCCCCEEEEEccCCCHHHHHHHhcCC-CEEEEEcCCHHHHHHHHHhCccccccccceEEEeCH--------hHcCcCCCC
Confidence 34567999999999999999988753 39999999999999987753311 012222221 111111234
Q ss_pred EEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 153 IATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 153 ~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
.+.+..++.++ ..++..+.++|||||.+++..
T Consensus 106 ~~~~D~v~~~l-----~~~l~~i~rvLkpgG~lv~~~ 137 (232)
T 3opn_A 106 FTSIDVSFISL-----DLILPPLYEILEKNGEVAALI 137 (232)
T ss_dssp EEEECCSSSCG-----GGTHHHHHHHSCTTCEEEEEE
T ss_pred EEEEEEEhhhH-----HHHHHHHHHhccCCCEEEEEE
Confidence 44443333332 568999999999999999863
No 234
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.29 E-value=4.9e-12 Score=103.72 Aligned_cols=112 Identities=21% Similarity=0.132 Sum_probs=83.8
Q ss_pred CCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCC--CceEEeccCCCcccccCCCCCcccEEEe
Q psy1107 79 GEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDAS--KMNVFPCDVTEDDILNQVPHNSVDIATL 156 (218)
Q Consensus 79 ~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~--~i~~~~~d~~~~~~~~~~~~~~~D~i~~ 156 (218)
++.+|||+|||+|.++..++..+ ..+++++|+|+.+++.++.++..++. ++.+++.|+.+..........+||+|++
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g-~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~ 295 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAG-ADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVL 295 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEE
Confidence 77899999999999999999874 34999999999999999998765542 7899999886521100112458999998
Q ss_pred chhhcCCCc-------chHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 157 IFVLSAIHP-------NKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 157 ~~~l~~~~~-------~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
.......+. .....++..+.++|+|||.+++.+..
T Consensus 296 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 337 (396)
T 2as0_A 296 DPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCS 337 (396)
T ss_dssp CCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 532211111 34667889999999999999887654
No 235
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.29 E-value=2.8e-12 Score=99.40 Aligned_cols=106 Identities=11% Similarity=0.017 Sum_probs=74.2
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCc---ccCCCceEE--eccCCCcccccCCCCCcc
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPL---YDASKMNVF--PCDVTEDDILNQVPHNSV 151 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~---~~~~~i~~~--~~d~~~~~~~~~~~~~~~ 151 (218)
..++.+|||+|||+|.++..+++. .+|+++|+++ ++..+..... ..+.++.++ ++|+.+ ++..+|
T Consensus 72 ~~~g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~------l~~~~f 141 (265)
T 2oxt_A 72 VELTGRVVDLGCGRGGWSYYAASR---PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHT------LPVERT 141 (265)
T ss_dssp CCCCEEEEEESCTTSHHHHHHHTS---TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTT------SCCCCC
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHc---CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhH------CCCCCC
Confidence 457789999999999999988876 4899999998 4322221110 111267888 888866 235689
Q ss_pred cEEEechhhcCCCc---chH--HHHHHHHHHhccCCe--EEEEEecCCC
Q psy1107 152 DIATLIFVLSAIHP---NKF--STVVKNLFIMLKSGG--IILFRDYGLH 193 (218)
Q Consensus 152 D~i~~~~~l~~~~~---~~~--~~~l~~~~~~Lk~gG--~li~~~~~~~ 193 (218)
|+|+|..+ ++.+. +.. ..++..+.++|+||| .|++..+...
T Consensus 142 D~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~~~ 189 (265)
T 2oxt_A 142 DVIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLCPY 189 (265)
T ss_dssp SEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESCTT
T ss_pred cEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCCCC
Confidence 99999766 33321 111 137888999999999 9999877633
No 236
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.29 E-value=5e-12 Score=104.93 Aligned_cols=112 Identities=11% Similarity=0.044 Sum_probs=83.4
Q ss_pred hhcCCCcEEEEecCCCchhHHHHhhcCC-ccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccE
Q psy1107 75 NQDVGEGVLLEVGCGVGNFIFPLLSWSK-ICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDI 153 (218)
Q Consensus 75 ~~~~~~~~vLDiGcG~G~~~~~~~~~~~-~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~ 153 (218)
....++.+|||+|||+|..+..++...+ ...|+++|+++.+++.+++++...+..+.+.+.|+.... ....++||+
T Consensus 97 L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~---~~~~~~FD~ 173 (464)
T 3m6w_A 97 LDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALA---EAFGTYFHR 173 (464)
T ss_dssp HCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHH---HHHCSCEEE
T ss_pred cCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECCHHHhh---hhccccCCE
Confidence 3456788999999999999999997743 369999999999999999987665533888888876521 112458999
Q ss_pred EEech------hhcCCC-------cc-------hHHHHHHHHHHhccCCeEEEEEe
Q psy1107 154 ATLIF------VLSAIH-------PN-------KFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 154 i~~~~------~l~~~~-------~~-------~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
|++.. ++...+ ++ .+..++..+.++|||||.|+++.
T Consensus 174 Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysT 229 (464)
T 3m6w_A 174 VLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYST 229 (464)
T ss_dssp EEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred EEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 99621 222222 11 13678999999999999999865
No 237
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.28 E-value=1.2e-11 Score=100.67 Aligned_cols=107 Identities=19% Similarity=0.192 Sum_probs=81.0
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccCCCCCcccEE
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQVPHNSVDIA 154 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~~D~i 154 (218)
..++.+|||+|||+|.+++.++..++..+++|+|+|+.+++.|+.++...+ .++.+.++|+.+ .+.+.++||+|
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~----~~~~~~~fD~I 290 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQ----LSQYVDSVDFA 290 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGG----GGGTCSCEEEE
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhh----CCcccCCcCEE
Confidence 567889999999999999999988765689999999999999999876555 479999999987 34445689999
Q ss_pred EechhhcCCC------cchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 155 TLIFVLSAIH------PNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 155 ~~~~~l~~~~------~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
+++..+.... .+....+++.+.++| +|.+++..
T Consensus 291 i~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~ 329 (373)
T 3tm4_A 291 ISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFIT 329 (373)
T ss_dssp EEECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEE
T ss_pred EECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEE
Confidence 9965433211 122367788888888 44444444
No 238
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.28 E-value=5.1e-12 Score=110.29 Aligned_cols=116 Identities=13% Similarity=0.097 Sum_probs=86.8
Q ss_pred HHhhhcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC---CCceEEeccCCCcccccCCCC
Q psy1107 72 EFVNQDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA---SKMNVFPCDVTEDDILNQVPH 148 (218)
Q Consensus 72 ~~~~~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~---~~i~~~~~d~~~~~~~~~~~~ 148 (218)
..+....++.+|||+|||+|.++..++..+. .+|+++|+|+.+++.+++++..++ .++.+++.|+.+. .....
T Consensus 532 ~~l~~~~~g~~VLDlg~GtG~~sl~aa~~ga-~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~---l~~~~ 607 (703)
T 3v97_A 532 RMLGQMSKGKDFLNLFSYTGSATVHAGLGGA-RSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAW---LREAN 607 (703)
T ss_dssp HHHHHHCTTCEEEEESCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHH---HHHCC
T ss_pred HHHHHhcCCCcEEEeeechhHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHH---HHhcC
Confidence 3334445788999999999999999987664 479999999999999999876554 3689999998662 12234
Q ss_pred CcccEEEechhhcC--------CC-cchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 149 NSVDIATLIFVLSA--------IH-PNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 149 ~~~D~i~~~~~l~~--------~~-~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
++||+|++.-.... +. ..+...++..+.++|+|||.|++..-.
T Consensus 608 ~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 608 EQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp CCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 58999998542110 00 135667899999999999999987633
No 239
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.28 E-value=1.8e-11 Score=102.35 Aligned_cols=109 Identities=16% Similarity=0.135 Sum_probs=82.9
Q ss_pred CCcEEEEecCCCchhHHHHhhcC-CccEEEEEeCCHHHHHHHHhCCcccC-CCceEEeccCCCcccccCCCCCcccEEEe
Q psy1107 79 GEGVLLEVGCGVGNFIFPLLSWS-KICYIHACDISPRAVNFFKLNPLYDA-SKMNVFPCDVTEDDILNQVPHNSVDIATL 156 (218)
Q Consensus 79 ~~~~vLDiGcG~G~~~~~~~~~~-~~~~v~~~D~s~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~~~~D~i~~ 156 (218)
++.+|||+|||+|..+..++... +...|+++|+++.+++.+++++...+ .++.+.+.|+.... ....++||.|++
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~---~~~~~~fD~Il~ 193 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFG---AAVPEMFDAILL 193 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHH---HHSTTCEEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhh---hhccccCCEEEE
Confidence 78899999999999999999874 34699999999999999999876544 47889999887621 112358999998
Q ss_pred c------hhhcCCC-------cc-------hHHHHHHHHHHhccCCeEEEEEec
Q psy1107 157 I------FVLSAIH-------PN-------KFSTVVKNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 157 ~------~~l~~~~-------~~-------~~~~~l~~~~~~Lk~gG~li~~~~ 190 (218)
. .++...+ ++ ....++..+.++|||||.|+++..
T Consensus 194 D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTc 247 (479)
T 2frx_A 194 DAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTC 247 (479)
T ss_dssp ECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred CCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecc
Confidence 3 2232222 11 135788999999999999998753
No 240
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.27 E-value=2e-12 Score=94.20 Aligned_cols=92 Identities=11% Similarity=0.045 Sum_probs=73.8
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEe
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATL 156 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~ 156 (218)
..++.+|||+|||. +++|+|+.+++.++++.. .++.+.+.|+.+... .++++++||+|++
T Consensus 10 ~~~g~~vL~~~~g~----------------v~vD~s~~ml~~a~~~~~---~~~~~~~~d~~~~~~-~~~~~~~fD~V~~ 69 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS----------------SPVEALKGLVDKLQALTG---NEGRVSVENIKQLLQ-SAHKESSFDIILS 69 (176)
T ss_dssp CCTTSEEEEEECTT----------------SCHHHHHHHHHHHHHHTT---TTSEEEEEEGGGGGG-GCCCSSCEEEEEE
T ss_pred CCCCCEEEEecCCc----------------eeeeCCHHHHHHHHHhcc---cCcEEEEechhcCcc-ccCCCCCEeEEEE
Confidence 56788999999986 138999999999998753 258999999876321 1236779999999
Q ss_pred chhhcCCCcchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 157 IFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 157 ~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
..+++|++ .+...++++++++|||||.|++.+
T Consensus 70 ~~~l~~~~-~~~~~~l~~~~r~LkpgG~l~~~~ 101 (176)
T 2ld4_A 70 GLVPGSTT-LHSAEILAEIARILRPGGCLFLKE 101 (176)
T ss_dssp CCSTTCCC-CCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred CChhhhcc-cCHHHHHHHHHHHCCCCEEEEEEc
Confidence 99999983 245789999999999999999954
No 241
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.26 E-value=9.1e-12 Score=99.92 Aligned_cols=101 Identities=22% Similarity=0.297 Sum_probs=81.3
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccCCCCCcccEE
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQVPHNSVDIA 154 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~~D~i 154 (218)
..++.+|||+|||+|.++.. +. + ..+++++|+|+.+++.+++++..++ .++.+++.|+.+. . ++||+|
T Consensus 193 ~~~~~~VLDlg~G~G~~~l~-a~-~-~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~----~---~~fD~V 262 (336)
T 2yx1_A 193 VSLNDVVVDMFAGVGPFSIA-CK-N-AKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREV----D---VKGNRV 262 (336)
T ss_dssp CCTTCEEEETTCTTSHHHHH-TT-T-SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGC----C---CCEEEE
T ss_pred cCCCCEEEEccCccCHHHHh-cc-C-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHh----c---CCCcEE
Confidence 35788999999999999999 77 3 4699999999999999999876554 4789999998762 1 589999
Q ss_pred EechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCCC
Q psy1107 155 TLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLH 193 (218)
Q Consensus 155 ~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~~ 193 (218)
++.. |.....++..+.++|+|||.+++.++...
T Consensus 263 i~dp------P~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 263 IMNL------PKFAHKFIDKALDIVEEGGVIHYYTIGKD 295 (336)
T ss_dssp EECC------TTTGGGGHHHHHHHEEEEEEEEEEEEESS
T ss_pred EECC------cHhHHHHHHHHHHHcCCCCEEEEEEeecC
Confidence 9842 22234788889999999999999776554
No 242
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.22 E-value=7.3e-12 Score=103.81 Aligned_cols=112 Identities=13% Similarity=0.040 Sum_probs=83.0
Q ss_pred hhcCCCcEEEEecCCCchhHHHHhhcCC-ccEEEEEeCCHHHHHHHHhCCcccC-CCceEEeccCCCcccccCCCCCccc
Q psy1107 75 NQDVGEGVLLEVGCGVGNFIFPLLSWSK-ICYIHACDISPRAVNFFKLNPLYDA-SKMNVFPCDVTEDDILNQVPHNSVD 152 (218)
Q Consensus 75 ~~~~~~~~vLDiGcG~G~~~~~~~~~~~-~~~v~~~D~s~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~~~~D 152 (218)
....++.+|||+|||+|..+..++...+ ...|+++|+++.+++.+++++...+ .++.+.+.|..... ....++||
T Consensus 101 L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~---~~~~~~FD 177 (456)
T 3m4x_A 101 AAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELV---PHFSGFFD 177 (456)
T ss_dssp HCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHH---HHHTTCEE
T ss_pred cCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhh---hhccccCC
Confidence 4456788999999999999999987633 3699999999999999999876555 56888888876521 11235899
Q ss_pred EEEechh------hcCCC-------c-------chHHHHHHHHHHhccCCeEEEEEe
Q psy1107 153 IATLIFV------LSAIH-------P-------NKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 153 ~i~~~~~------l~~~~-------~-------~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
+|++... +..-+ + .....++..+.++|||||.|+++.
T Consensus 178 ~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsT 234 (456)
T 3m4x_A 178 RIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYST 234 (456)
T ss_dssp EEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 9997432 11111 0 112378899999999999999865
No 243
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.21 E-value=1.4e-11 Score=97.48 Aligned_cols=105 Identities=13% Similarity=0.061 Sum_probs=71.3
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeC----CHHHHHHHHhCCccc-CCCceEEec-cCCCcccccCCCCCc
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDI----SPRAVNFFKLNPLYD-ASKMNVFPC-DVTEDDILNQVPHNS 150 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~----s~~~~~~~~~~~~~~-~~~i~~~~~-d~~~~~~~~~~~~~~ 150 (218)
..++.+|||+|||+|.++..+++. .+|+++|+ ++.+++.+ ..... ..++.+.+. |+.. ++..+
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~---~~V~gvD~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~D~~~------l~~~~ 148 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL---KNVREVKGLTKGGPGHEEPI--PMSTYGWNLVRLQSGVDVFF------IPPER 148 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS---TTEEEEEEECCCSTTSCCCC--CCCSTTGGGEEEECSCCTTT------SCCCC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc---CCEEEEeccccCchhHHHHH--HhhhcCCCCeEEEecccccc------CCcCC
Confidence 456789999999999999999877 37999999 55443211 11111 145788877 7754 22458
Q ss_pred ccEEEechhhcCCC--cch--HHHHHHHHHHhccCCeEEEEEecCC
Q psy1107 151 VDIATLIFVLSAIH--PNK--FSTVVKNLFIMLKSGGIILFRDYGL 192 (218)
Q Consensus 151 ~D~i~~~~~l~~~~--~~~--~~~~l~~~~~~Lk~gG~li~~~~~~ 192 (218)
||+|+|...+.... .+. ...++..+.++|||||.|++..+..
T Consensus 149 fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 149 CDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp CSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred CCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 99999976543111 111 1147888899999999999876655
No 244
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.20 E-value=1.1e-10 Score=96.36 Aligned_cols=100 Identities=18% Similarity=0.118 Sum_probs=75.6
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEe
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATL 156 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~ 156 (218)
..++.+|||+|||+|.++..++..+ .+|+++|+|+.+++.|+.++...+..+.|...|+.+. .+. +||+|++
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~~--~~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~-----~~~-~fD~Vv~ 359 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKRG--FNVKGFDSNEFAIEMARRNVEINNVDAEFEVASDREV-----SVK-GFDTVIV 359 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHHTCCEEEEECCTTTC-----CCT-TCSEEEE
T ss_pred cCCCCEEEEeeccchHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHcCCcEEEEECChHHc-----Ccc-CCCEEEE
Confidence 5677899999999999999998865 4999999999999999998765443388999998762 122 7999998
Q ss_pred chhhcCCCcchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 157 IFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 157 ~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
.-.-..+ ...+++.+. .|+|+|++++..
T Consensus 360 dPPr~g~----~~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 360 DPPRAGL----HPRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp CCCTTCS----CHHHHHHHH-HHCCSEEEEEES
T ss_pred cCCccch----HHHHHHHHH-hcCCCcEEEEEC
Confidence 5332222 123445444 589999999875
No 245
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.20 E-value=2e-11 Score=99.20 Aligned_cols=102 Identities=14% Similarity=0.050 Sum_probs=79.5
Q ss_pred CCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCccc---------------C-CCceEEeccCCCccc
Q psy1107 79 GEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYD---------------A-SKMNVFPCDVTEDDI 142 (218)
Q Consensus 79 ~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~---------------~-~~i~~~~~d~~~~~~ 142 (218)
++.+|||+|||+|..++.++...+..+|+++|+++.+++.++++...+ + .++.+++.|+....
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~- 125 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLM- 125 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHH-
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHH-
Confidence 678999999999999999998755568999999999999999987655 4 24888888876521
Q ss_pred ccCCCCCcccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 143 LNQVPHNSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 143 ~~~~~~~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
... ...||+|++. |+.....++..+.+.|++||++++..
T Consensus 126 -~~~-~~~fD~I~lD------P~~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 126 -AER-HRYFHFIDLD------PFGSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp -HHS-TTCEEEEEEC------CSSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred -Hhc-cCCCCEEEeC------CCCCHHHHHHHHHHhcCCCCEEEEEe
Confidence 111 3479999963 22233578889999999999888764
No 246
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.19 E-value=1.6e-11 Score=96.28 Aligned_cols=76 Identities=29% Similarity=0.362 Sum_probs=61.2
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccCCCCCcccE
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQVPHNSVDI 153 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~~D~ 153 (218)
...++.+|||+|||+|.++..++..+ .+++++|+++.+++.++++....+ .++.++++|+.+. +++ +||+
T Consensus 25 ~~~~~~~VLDiG~G~G~lt~~L~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~----~~~--~fD~ 96 (285)
T 1zq9_A 25 ALRPTDVVLEVGPGTGNMTVKLLEKA--KKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKT----DLP--FFDT 96 (285)
T ss_dssp CCCTTCEEEEECCTTSTTHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTS----CCC--CCSE
T ss_pred CCCCCCEEEEEcCcccHHHHHHHhhC--CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecc----cch--hhcE
Confidence 34567899999999999999999876 489999999999999998754333 4789999998763 232 6999
Q ss_pred EEechh
Q psy1107 154 ATLIFV 159 (218)
Q Consensus 154 i~~~~~ 159 (218)
|+++..
T Consensus 97 vv~nlp 102 (285)
T 1zq9_A 97 CVANLP 102 (285)
T ss_dssp EEEECC
T ss_pred EEEecC
Confidence 998543
No 247
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.18 E-value=1.8e-10 Score=95.41 Aligned_cols=105 Identities=19% Similarity=0.234 Sum_probs=77.5
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC-CCceEEeccCCCcccccCCCCCcccEEE
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA-SKMNVFPCDVTEDDILNQVPHNSVDIAT 155 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~~~~D~i~ 155 (218)
..++.+|||+|||+|.++..++... .+|+++|+|+.+++.|+.++...+ .++.|++.|+.+.....+++.++||+|+
T Consensus 284 ~~~~~~VLDlgcG~G~~~~~la~~~--~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv 361 (433)
T 1uwv_A 284 VQPEDRVLDLFCGMGNFTLPLATQA--ASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVL 361 (433)
T ss_dssp CCTTCEEEEESCTTTTTHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEE
T ss_pred CCCCCEEEECCCCCCHHHHHHHhhC--CEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEE
Confidence 3466899999999999999998873 599999999999999998876544 4799999998763211123456899999
Q ss_pred echhhcCCCcchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 156 LIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 156 ~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
+.-... ....+++.+.+ ++|+++++++.
T Consensus 362 ~dPPr~-----g~~~~~~~l~~-~~p~~ivyvsc 389 (433)
T 1uwv_A 362 LDPARA-----GAAGVMQQIIK-LEPIRIVYVSC 389 (433)
T ss_dssp ECCCTT-----CCHHHHHHHHH-HCCSEEEEEES
T ss_pred ECCCCc-----cHHHHHHHHHh-cCCCeEEEEEC
Confidence 843222 12345554443 68999888865
No 248
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.14 E-value=5.8e-11 Score=98.77 Aligned_cols=108 Identities=17% Similarity=0.245 Sum_probs=80.4
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcC-------------CccEEEEEeCCHHHHHHHHhCCcccCC---CceEEeccCCCc
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWS-------------KICYIHACDISPRAVNFFKLNPLYDAS---KMNVFPCDVTED 140 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~-------------~~~~v~~~D~s~~~~~~~~~~~~~~~~---~i~~~~~d~~~~ 140 (218)
..++.+|||+|||+|.++..+++.. +...++|+|+++.+++.|+.++...+. +..+.++|....
T Consensus 169 ~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~ 248 (445)
T 2okc_A 169 PQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEK 248 (445)
T ss_dssp CCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTS
T ss_pred CCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCC
Confidence 4556799999999999998887642 235899999999999999887543332 678888887663
Q ss_pred ccccCCCCCcccEEEechhhcCCCcc---------------hHHHHHHHHHHhccCCeEEEEEe
Q psy1107 141 DILNQVPHNSVDIATLIFVLSAIHPN---------------KFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 141 ~~~~~~~~~~~D~i~~~~~l~~~~~~---------------~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
.. ..+||+|+++-.+...... ....++..+.++|+|||.+.++.
T Consensus 249 ----~~-~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~ 307 (445)
T 2okc_A 249 ----EP-STLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVL 307 (445)
T ss_dssp ----CC-SSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ----cc-cCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEE
Confidence 22 2389999997655543211 12478899999999999988765
No 249
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.10 E-value=1e-10 Score=96.47 Aligned_cols=99 Identities=17% Similarity=0.249 Sum_probs=73.7
Q ss_pred CCCcEEEEecCCCchhHHHHhhcC-CccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEe
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWS-KICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATL 156 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~-~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~ 156 (218)
.++.+|||+|||+|.++..+++.. +..+++|+|+++.+++.| .++.++++|+... .+.++||+|++
T Consensus 38 ~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a--------~~~~~~~~D~~~~-----~~~~~fD~Ii~ 104 (421)
T 2ih2_A 38 PRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP--------PWAEGILADFLLW-----EPGEAFDLILG 104 (421)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC--------TTEEEEESCGGGC-----CCSSCEEEEEE
T ss_pred CCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC--------CCCcEEeCChhhc-----CccCCCCEEEE
Confidence 346699999999999999998764 456999999999987665 3688889988652 22458999999
Q ss_pred chhhcC----------CCcc-----------------hHHHHHHHHHHhccCCeEEEEEe
Q psy1107 157 IFVLSA----------IHPN-----------------KFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 157 ~~~l~~----------~~~~-----------------~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
+-.... ++.+ ....++..+.++|+|||.+++..
T Consensus 105 NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~ 164 (421)
T 2ih2_A 105 NPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVV 164 (421)
T ss_dssp CCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEE
Confidence 532211 1111 12366889999999999988865
No 250
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.09 E-value=3.6e-10 Score=88.37 Aligned_cols=99 Identities=16% Similarity=0.084 Sum_probs=69.7
Q ss_pred cCCCcEEEEecCCC------chhHHHHhhcCC-ccEEEEEeCCHHHHHHHHhCCcccCCCceE-EeccCCCcccccCCCC
Q psy1107 77 DVGEGVLLEVGCGV------GNFIFPLLSWSK-ICYIHACDISPRAVNFFKLNPLYDASKMNV-FPCDVTEDDILNQVPH 148 (218)
Q Consensus 77 ~~~~~~vLDiGcG~------G~~~~~~~~~~~-~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~-~~~d~~~~~~~~~~~~ 148 (218)
..++.+|||+|||+ |. ..++...+ ..+|+++|+++. + .++.+ +++|+.+. +++
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-v-----------~~v~~~i~gD~~~~----~~~- 121 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-V-----------SDADSTLIGDCATV----HTA- 121 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-B-----------CSSSEEEESCGGGC----CCS-
T ss_pred CCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-C-----------CCCEEEEECccccC----Ccc-
Confidence 45678999999955 66 33444433 579999999987 1 26888 99998762 222
Q ss_pred CcccEEEechhhcC--------CC-cchHHHHHHHHHHhccCCeEEEEEecCCCc
Q psy1107 149 NSVDIATLIFVLSA--------IH-PNKFSTVVKNLFIMLKSGGIILFRDYGLHD 194 (218)
Q Consensus 149 ~~~D~i~~~~~l~~--------~~-~~~~~~~l~~~~~~Lk~gG~li~~~~~~~~ 194 (218)
++||+|++...... .. ......+++.+.++|||||.|++..+....
T Consensus 122 ~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~~ 176 (290)
T 2xyq_A 122 NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSW 176 (290)
T ss_dssp SCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSC
T ss_pred CcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccCC
Confidence 57999998643211 10 123568899999999999999997765443
No 251
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.07 E-value=5.7e-10 Score=91.14 Aligned_cols=114 Identities=11% Similarity=0.060 Sum_probs=80.2
Q ss_pred hhcCCCcEEEEecCCCchhHHHHhhcCCc--------------------------------------cEEEEEeCCHHHH
Q psy1107 75 NQDVGEGVLLEVGCGVGNFIFPLLSWSKI--------------------------------------CYIHACDISPRAV 116 (218)
Q Consensus 75 ~~~~~~~~vLDiGcG~G~~~~~~~~~~~~--------------------------------------~~v~~~D~s~~~~ 116 (218)
....++..|||++||+|.+++.++....+ .+++|+|+++.++
T Consensus 197 ~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al 276 (393)
T 3k0b_A 197 TSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLI 276 (393)
T ss_dssp SCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHH
T ss_pred hCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHH
Confidence 33456789999999999999888765322 4699999999999
Q ss_pred HHHHhCCcccC--CCceEEeccCCCcccccCCCCCcccEEEechhhcC-CC-cchHHHHHHHHHHhccC--CeEEEEEec
Q psy1107 117 NFFKLNPLYDA--SKMNVFPCDVTEDDILNQVPHNSVDIATLIFVLSA-IH-PNKFSTVVKNLFIMLKS--GGIILFRDY 190 (218)
Q Consensus 117 ~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~~D~i~~~~~l~~-~~-~~~~~~~l~~~~~~Lk~--gG~li~~~~ 190 (218)
+.|+.++...+ .++.+.+.|+.+. ..+ .+||+|+++-.+.. +. ......+...+.+.||+ ||.+++...
T Consensus 277 ~~Ar~Na~~~gl~~~I~~~~~D~~~~----~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~ 351 (393)
T 3k0b_A 277 EIAKQNAVEAGLGDLITFRQLQVADF----QTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVLTS 351 (393)
T ss_dssp HHHHHHHHHTTCTTCSEEEECCGGGC----CCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEEEC
T ss_pred HHHHHHHHHcCCCCceEEEECChHhC----CCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 99999876554 3599999998772 223 38999998643211 10 12344555666666665 888888764
Q ss_pred CCC
Q psy1107 191 GLH 193 (218)
Q Consensus 191 ~~~ 193 (218)
...
T Consensus 352 ~~~ 354 (393)
T 3k0b_A 352 YEL 354 (393)
T ss_dssp CTT
T ss_pred CHH
Confidence 433
No 252
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.07 E-value=1.1e-09 Score=89.00 Aligned_cols=119 Identities=8% Similarity=0.001 Sum_probs=84.6
Q ss_pred hhcCCCcEEEEecCCCchhHHHHhhcCCc--------------------------------------cEEEEEeCCHHHH
Q psy1107 75 NQDVGEGVLLEVGCGVGNFIFPLLSWSKI--------------------------------------CYIHACDISPRAV 116 (218)
Q Consensus 75 ~~~~~~~~vLDiGcG~G~~~~~~~~~~~~--------------------------------------~~v~~~D~s~~~~ 116 (218)
....++..+||++||+|.+++..+....+ .+++|+|+++.++
T Consensus 190 ~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al 269 (384)
T 3ldg_A 190 SNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMV 269 (384)
T ss_dssp TTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHH
T ss_pred hCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHH
Confidence 34456789999999999999888765332 4699999999999
Q ss_pred HHHHhCCcccC--CCceEEeccCCCcccccCCCCCcccEEEechhhc-CCC-cchHHHHHHHHHHhccC--CeEEEEEec
Q psy1107 117 NFFKLNPLYDA--SKMNVFPCDVTEDDILNQVPHNSVDIATLIFVLS-AIH-PNKFSTVVKNLFIMLKS--GGIILFRDY 190 (218)
Q Consensus 117 ~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~~D~i~~~~~l~-~~~-~~~~~~~l~~~~~~Lk~--gG~li~~~~ 190 (218)
+.|+.++...+ ..+.+.+.|+.+. ..+ .+||+|+++-.+. -+. ..+...+...+.+.||+ ||.+++...
T Consensus 270 ~~Ar~Na~~~gl~~~I~~~~~D~~~l----~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~ 344 (384)
T 3ldg_A 270 EIARKNAREVGLEDVVKLKQMRLQDF----KTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILTN 344 (384)
T ss_dssp HHHHHHHHHTTCTTTEEEEECCGGGC----CCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEES
T ss_pred HHHHHHHHHcCCCCceEEEECChHHC----Ccc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEEC
Confidence 99999876554 3589999998772 223 3899999864322 121 23455666777777766 888888775
Q ss_pred CCCchhhh
Q psy1107 191 GLHDMAQM 198 (218)
Q Consensus 191 ~~~~~~~~ 198 (218)
...-...+
T Consensus 345 ~~~l~~~~ 352 (384)
T 3ldg_A 345 DTDFEQKF 352 (384)
T ss_dssp CTTHHHHH
T ss_pred CHHHHHHh
Confidence 43333333
No 253
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.07 E-value=2.9e-10 Score=89.67 Aligned_cols=77 Identities=25% Similarity=0.436 Sum_probs=57.6
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC-CCceEEeccCCCcccccCCCCCcccEE
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA-SKMNVFPCDVTEDDILNQVPHNSVDIA 154 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~~~~D~i 154 (218)
...++.+|||+|||+|.++..++..+ .+++++|+++.+++.++.+....+ .++.++++|+... ++ .+||+|
T Consensus 39 ~~~~~~~VLDiG~G~G~lt~~La~~~--~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~----~~--~~~D~V 110 (299)
T 2h1r_A 39 KIKSSDIVLEIGCGTGNLTVKLLPLA--KKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKT----VF--PKFDVC 110 (299)
T ss_dssp CCCTTCEEEEECCTTSTTHHHHTTTS--SEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSS----CC--CCCSEE
T ss_pred CCCCcCEEEEEcCcCcHHHHHHHhcC--CEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhC----Cc--ccCCEE
Confidence 34567899999999999999998874 599999999999999998754333 5789999998762 22 379999
Q ss_pred Eechhh
Q psy1107 155 TLIFVL 160 (218)
Q Consensus 155 ~~~~~l 160 (218)
+++...
T Consensus 111 v~n~py 116 (299)
T 2h1r_A 111 TANIPY 116 (299)
T ss_dssp EEECCG
T ss_pred EEcCCc
Confidence 986443
No 254
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.07 E-value=1.5e-10 Score=92.56 Aligned_cols=108 Identities=13% Similarity=0.124 Sum_probs=77.0
Q ss_pred CCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC---------CCceEEeccCCCcccccCC--C
Q psy1107 79 GEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA---------SKMNVFPCDVTEDDILNQV--P 147 (218)
Q Consensus 79 ~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~---------~~i~~~~~d~~~~~~~~~~--~ 147 (218)
++.+||+||||.|..+..+++..+ .+++++|+++.+++.|++++.... .++.++..|.... .... .
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~--L~~~~~~ 264 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPV--LKRYAKE 264 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHH--HHHHHHH
T ss_pred CCCEEEEEECChhHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHH--HHhhhcc
Confidence 578999999999999999988765 699999999999999998865311 2688999987662 1111 2
Q ss_pred CCcccEEEechhh-c-CCCcc--hHHHHHHHH----HHhccCCeEEEEEe
Q psy1107 148 HNSVDIATLIFVL-S-AIHPN--KFSTVVKNL----FIMLKSGGIILFRD 189 (218)
Q Consensus 148 ~~~~D~i~~~~~l-~-~~~~~--~~~~~l~~~----~~~Lk~gG~li~~~ 189 (218)
.++||+|++...- . ...|. -...+++.+ .++|+|||++++..
T Consensus 265 ~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs 314 (364)
T 2qfm_A 265 GREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 314 (364)
T ss_dssp TCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEc
Confidence 4589999985421 1 11111 113444554 89999999998865
No 255
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.04 E-value=3.6e-11 Score=92.22 Aligned_cols=104 Identities=11% Similarity=0.045 Sum_probs=74.2
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCC-CCcccEEE
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVP-HNSVDIAT 155 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~-~~~~D~i~ 155 (218)
..++.+|||+|||+|.++..++..+ .+++++|+|+.+++.++++.. ...++.++++|+.+. +++ .++| .|+
T Consensus 27 ~~~~~~VLDiG~G~G~~~~~l~~~~--~~v~~id~~~~~~~~a~~~~~-~~~~v~~~~~D~~~~----~~~~~~~f-~vv 98 (245)
T 1yub_A 27 LKETDTVYEIGTGKGHLTTKLAKIS--KQVTSIELDSHLFNLSSEKLK-LNTRVTLIHQDILQF----QFPNKQRY-KIV 98 (245)
T ss_dssp CCSSEEEEECSCCCSSCSHHHHHHS--SEEEESSSSCSSSSSSSCTTT-TCSEEEECCSCCTTT----TCCCSSEE-EEE
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhC--CeEEEEECCHHHHHHHHHHhc-cCCceEEEECChhhc----CcccCCCc-EEE
Confidence 4567899999999999999999876 599999999999999888765 235789999998773 333 2478 555
Q ss_pred echhhcCCCcchHH----------HHH----HHHHHhccCCeEEEEEe
Q psy1107 156 LIFVLSAIHPNKFS----------TVV----KNLFIMLKSGGIILFRD 189 (218)
Q Consensus 156 ~~~~l~~~~~~~~~----------~~l----~~~~~~Lk~gG~li~~~ 189 (218)
++-.. +....... .++ +.+.++|+|||.+.+..
T Consensus 99 ~n~Py-~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 99 GNIPY-HLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp EECCS-SSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred EeCCc-cccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 54221 11111111 223 66889999999877644
No 256
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.04 E-value=2.3e-10 Score=93.06 Aligned_cols=103 Identities=16% Similarity=0.079 Sum_probs=79.8
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCc-cEEEEEeCCHHHHHHHHhCCcccC-CC--ceEEeccCCCccccc-CCCCCccc
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKI-CYIHACDISPRAVNFFKLNPLYDA-SK--MNVFPCDVTEDDILN-QVPHNSVD 152 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~-~~v~~~D~s~~~~~~~~~~~~~~~-~~--i~~~~~d~~~~~~~~-~~~~~~~D 152 (218)
.++.+|||++||+|.+++.++..... .+|+++|+++.+++.++++++.++ .+ +.+++.|+.+. .. .. ...||
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~--l~~~~-~~~fD 127 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFF--LRKEW-GFGFD 127 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHH--HHSCC-SSCEE
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHH--HHHhh-CCCCc
Confidence 45789999999999999999886432 489999999999999999987665 33 88888887652 11 22 34799
Q ss_pred EEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 153 IATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 153 ~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
+|++.- +.....++..+.+.|++||+|++..
T Consensus 128 ~V~lDP------~g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 128 YVDLDP------FGTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp EEEECC------SSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEECC------CcCHHHHHHHHHHHhCCCCEEEEEe
Confidence 999753 1223468888999999999888866
No 257
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=99.03 E-value=3.2e-10 Score=86.81 Aligned_cols=110 Identities=12% Similarity=0.076 Sum_probs=70.4
Q ss_pred hhcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCC-cccCCCceEEeccCCCcccccCCCCCcccE
Q psy1107 75 NQDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNP-LYDASKMNVFPCDVTEDDILNQVPHNSVDI 153 (218)
Q Consensus 75 ~~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~-~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~ 153 (218)
....+..+|||+|||+|.|+..++...+...+.++|+.... ...... ...+.++..+..++.. ..++..++|+
T Consensus 70 ~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl--~~~pi~~~~~g~~ii~~~~~~dv----~~l~~~~~Dl 143 (277)
T 3evf_A 70 GYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDG--HEKPMNVQSLGWNIITFKDKTDI----HRLEPVKCDT 143 (277)
T ss_dssp TSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTT--CCCCCCCCBTTGGGEEEECSCCT----TTSCCCCCSE
T ss_pred CCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccC--cccccccCcCCCCeEEEecccee----hhcCCCCccE
Confidence 34567789999999999999888776544578888886432 000110 1111245555555422 3455678999
Q ss_pred EEechhhcCCCc---chH--HHHHHHHHHhccCC-eEEEEEecC
Q psy1107 154 ATLIFVLSAIHP---NKF--STVVKNLFIMLKSG-GIILFRDYG 191 (218)
Q Consensus 154 i~~~~~l~~~~~---~~~--~~~l~~~~~~Lk~g-G~li~~~~~ 191 (218)
|++....+ ..- +.. ..+++.+.++|+|| |.|++--|.
T Consensus 144 VlsD~apn-sG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 144 LLCDIGES-SSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp EEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred EEecCccC-cCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 99966544 211 111 13467889999999 999998877
No 258
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.02 E-value=4.3e-10 Score=91.30 Aligned_cols=100 Identities=19% Similarity=0.159 Sum_probs=72.4
Q ss_pred CcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC-CCceEEeccCCCcccccCCCC----------
Q psy1107 80 EGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA-SKMNVFPCDVTEDDILNQVPH---------- 148 (218)
Q Consensus 80 ~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~~---------- 148 (218)
+.+|||+|||+|.++..++... .+|+++|+++.+++.|+.++..++ .++.|+.+|+.+.. ..+..
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~~--~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~--~~~~~~~~~~~l~~~ 289 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARNF--DRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFT--QAMNGVREFNRLQGI 289 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGGS--SEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHH--HHHSSCCCCTTGGGS
T ss_pred CCEEEEccCCCCHHHHHHHhcC--CEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHH--HHHhhcccccccccc
Confidence 5789999999999999988754 489999999999999999876554 57999999886521 11111
Q ss_pred ----CcccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 149 ----NSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 149 ----~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
.+||+|++.-.-. .+...+.+.|+++|.+++.+..
T Consensus 290 ~~~~~~fD~Vv~dPPr~--------g~~~~~~~~l~~~g~ivyvsc~ 328 (369)
T 3bt7_A 290 DLKSYQCETIFVDPPRS--------GLDSETEKMVQAYPRILYISCN 328 (369)
T ss_dssp CGGGCCEEEEEECCCTT--------CCCHHHHHHHTTSSEEEEEESC
T ss_pred ccccCCCCEEEECcCcc--------ccHHHHHHHHhCCCEEEEEECC
Confidence 3799998742111 1234455666788888877644
No 259
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.02 E-value=2.1e-09 Score=84.29 Aligned_cols=76 Identities=12% Similarity=0.064 Sum_probs=62.3
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEE
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIAT 155 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~ 155 (218)
...++.+|||||||+|.++..++..+ .+|+++|+++.+++.++++.. ...++.++++|+.+. .++..+||.|+
T Consensus 47 ~~~~~~~VLEIG~G~G~lT~~La~~~--~~V~aVEid~~li~~a~~~~~-~~~~v~vi~gD~l~~----~~~~~~fD~Iv 119 (295)
T 3gru_A 47 NLTKDDVVLEIGLGKGILTEELAKNA--KKVYVIEIDKSLEPYANKLKE-LYNNIEIIWGDALKV----DLNKLDFNKVV 119 (295)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCGGGHHHHHHHHH-HCSSEEEEESCTTTS----CGGGSCCSEEE
T ss_pred CCCCcCEEEEECCCchHHHHHHHhcC--CEEEEEECCHHHHHHHHHHhc-cCCCeEEEECchhhC----CcccCCccEEE
Confidence 44567899999999999999999875 599999999999999998765 235899999999873 33444799999
Q ss_pred ech
Q psy1107 156 LIF 158 (218)
Q Consensus 156 ~~~ 158 (218)
++.
T Consensus 120 ~Nl 122 (295)
T 3gru_A 120 ANL 122 (295)
T ss_dssp EEC
T ss_pred EeC
Confidence 753
No 260
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.01 E-value=1.1e-09 Score=89.22 Aligned_cols=115 Identities=11% Similarity=0.044 Sum_probs=81.9
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhcCCc--------------------------------------cEEEEEeCCHHHHH
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSWSKI--------------------------------------CYIHACDISPRAVN 117 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~~~~--------------------------------------~~v~~~D~s~~~~~ 117 (218)
...++..|||++||+|.+++.++....+ ..++|+|+++.+++
T Consensus 192 ~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~ 271 (385)
T 3ldu_A 192 PWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESID 271 (385)
T ss_dssp CCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHH
T ss_pred CCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHH
Confidence 3456789999999999999988765321 47999999999999
Q ss_pred HHHhCCcccC--CCceEEeccCCCcccccCCCCCcccEEEechhhcC-CC-cchHHHHHHHHHHhccC--CeEEEEEecC
Q psy1107 118 FFKLNPLYDA--SKMNVFPCDVTEDDILNQVPHNSVDIATLIFVLSA-IH-PNKFSTVVKNLFIMLKS--GGIILFRDYG 191 (218)
Q Consensus 118 ~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~~D~i~~~~~l~~-~~-~~~~~~~l~~~~~~Lk~--gG~li~~~~~ 191 (218)
.|+.++...+ .++.+.+.|+.+. .. ..+||+|+++-.+.. +. ......+...+.+.|++ ||.+++....
T Consensus 272 ~Ar~Na~~~gl~~~i~~~~~D~~~l----~~-~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~ 346 (385)
T 3ldu_A 272 IARENAEIAGVDEYIEFNVGDATQF----KS-EDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLITSY 346 (385)
T ss_dssp HHHHHHHHHTCGGGEEEEECCGGGC----CC-SCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEEESC
T ss_pred HHHHHHHHcCCCCceEEEECChhhc----Cc-CCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEEECC
Confidence 9999876554 3689999998772 22 248999998644321 11 12445566667777766 8888877644
Q ss_pred CCch
Q psy1107 192 LHDM 195 (218)
Q Consensus 192 ~~~~ 195 (218)
..-.
T Consensus 347 ~~l~ 350 (385)
T 3ldu_A 347 EDFE 350 (385)
T ss_dssp TTHH
T ss_pred HHHH
Confidence 3333
No 261
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.98 E-value=3.9e-09 Score=83.47 Aligned_cols=112 Identities=12% Similarity=0.016 Sum_probs=78.4
Q ss_pred hhcCCCcEEEEecCCCchhHHHHhhc-CCccEEEEEeCCHHHHHHHHhCCcccC-CCceEEeccCCCcccccCCC-CCcc
Q psy1107 75 NQDVGEGVLLEVGCGVGNFIFPLLSW-SKICYIHACDISPRAVNFFKLNPLYDA-SKMNVFPCDVTEDDILNQVP-HNSV 151 (218)
Q Consensus 75 ~~~~~~~~vLDiGcG~G~~~~~~~~~-~~~~~v~~~D~s~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~-~~~~ 151 (218)
....++.+|||+|||+|..+..++.. .+..+|+++|+++.+++.+++++...+ .++.+++.|+.+... ..+ ..+|
T Consensus 98 l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~--~~~~~~~f 175 (309)
T 2b9e_A 98 LDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSP--SDPRYHEV 175 (309)
T ss_dssp HCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCT--TCGGGTTE
T ss_pred hCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCc--cccccCCC
Confidence 44567889999999999999999876 344699999999999999999876555 578999999866311 111 1479
Q ss_pred cEEEech------hhcCC---------Ccch-------HHHHHHHHHHhccCCeEEEEEe
Q psy1107 152 DIATLIF------VLSAI---------HPNK-------FSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 152 D~i~~~~------~l~~~---------~~~~-------~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
|.|++.. ++..- ++++ +..++..+.++|+ ||.|+++.
T Consensus 176 D~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsT 234 (309)
T 2b9e_A 176 HYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYST 234 (309)
T ss_dssp EEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEE
T ss_pred CEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEEC
Confidence 9999721 22111 1112 2356777777786 89888754
No 262
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.96 E-value=5.6e-09 Score=80.36 Aligned_cols=77 Identities=16% Similarity=0.176 Sum_probs=60.8
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEE
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIAT 155 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~ 155 (218)
...++.+|||||||+|.++..++..+ .+++++|+++.+++.++++... ..++.++++|+.+.++......++|| |+
T Consensus 26 ~~~~~~~VLEIG~G~G~lt~~La~~~--~~V~avEid~~~~~~~~~~~~~-~~~v~~i~~D~~~~~~~~~~~~~~~~-vv 101 (255)
T 3tqs_A 26 HPQKTDTLVEIGPGRGALTDYLLTEC--DNLALVEIDRDLVAFLQKKYNQ-QKNITIYQNDALQFDFSSVKTDKPLR-VV 101 (255)
T ss_dssp CCCTTCEEEEECCTTTTTHHHHTTTS--SEEEEEECCHHHHHHHHHHHTT-CTTEEEEESCTTTCCGGGSCCSSCEE-EE
T ss_pred CCCCcCEEEEEcccccHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHhh-CCCcEEEEcchHhCCHHHhccCCCeE-EE
Confidence 34567899999999999999999876 5999999999999999987553 35899999999885543222234688 44
Q ss_pred e
Q psy1107 156 L 156 (218)
Q Consensus 156 ~ 156 (218)
+
T Consensus 102 ~ 102 (255)
T 3tqs_A 102 G 102 (255)
T ss_dssp E
T ss_pred e
Confidence 3
No 263
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.91 E-value=3.6e-09 Score=83.29 Aligned_cols=81 Identities=17% Similarity=0.231 Sum_probs=64.2
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCccc-ccCCCCCcccEEE
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDI-LNQVPHNSVDIAT 155 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-~~~~~~~~~D~i~ 155 (218)
..++.+|||+|||+|..+..++...+..+++++|.|+.+++.|+++....+.++.++++|+.+... .......+||.|+
T Consensus 24 ~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~l~~~g~~~~D~Vl 103 (301)
T 1m6y_A 24 PEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKTLGIEKVDGIL 103 (301)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHHTTCSCEEEEE
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHHHHHhcCCCCCCEEE
Confidence 456789999999999999999988766799999999999999999876655689999999876321 1111114799998
Q ss_pred ec
Q psy1107 156 LI 157 (218)
Q Consensus 156 ~~ 157 (218)
+.
T Consensus 104 ~D 105 (301)
T 1m6y_A 104 MD 105 (301)
T ss_dssp EE
T ss_pred Ec
Confidence 74
No 264
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.90 E-value=3.8e-08 Score=75.29 Aligned_cols=60 Identities=17% Similarity=0.310 Sum_probs=52.2
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCC
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTE 139 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~ 139 (218)
..++.+|||+|||+|.++..++..+ .+++++|+|+.+++.++++.... .++.++++|+.+
T Consensus 28 ~~~~~~VLDiG~G~G~lt~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~-~~v~~~~~D~~~ 87 (244)
T 1qam_A 28 LNEHDNIFEIGSGKGHFTLELVQRC--NFVTAIEIDHKLCKTTENKLVDH-DNFQVLNKDILQ 87 (244)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHS--SEEEEECSCHHHHHHHHHHTTTC-CSEEEECCCGGG
T ss_pred CCCCCEEEEEeCCchHHHHHHHHcC--CeEEEEECCHHHHHHHHHhhccC-CCeEEEEChHHh
Confidence 4567899999999999999999886 59999999999999999876532 579999999877
No 265
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.88 E-value=2.6e-09 Score=90.68 Aligned_cols=111 Identities=12% Similarity=0.074 Sum_probs=79.3
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhcC------------------CccEEEEEeCCHHHHHHHHhCCcccC-CC-----ce
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSWS------------------KICYIHACDISPRAVNFFKLNPLYDA-SK-----MN 131 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~~------------------~~~~v~~~D~s~~~~~~~~~~~~~~~-~~-----i~ 131 (218)
...++.+|||+|||+|.++..++... ....++|+|+++.++..|+.++...+ .. ..
T Consensus 166 ~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~ 245 (541)
T 2ar0_A 166 KPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGA 245 (541)
T ss_dssp CCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBS
T ss_pred ccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCC
Confidence 34556799999999999988877542 12379999999999999987754333 22 67
Q ss_pred EEeccCCCcccccCCCCCcccEEEechhhcCCCc------------chHHHHHHHHHHhccCCeEEEEEe
Q psy1107 132 VFPCDVTEDDILNQVPHNSVDIATLIFVLSAIHP------------NKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 132 ~~~~d~~~~~~~~~~~~~~~D~i~~~~~l~~~~~------------~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
+.++|..... ..+..+||+|+++-.+..... .....++..+.++|+|||++.++.
T Consensus 246 I~~gDtL~~~---~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~ 312 (541)
T 2ar0_A 246 IRLGNTLGSD---GENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVV 312 (541)
T ss_dssp EEESCTTSHH---HHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEeCCCcccc---cccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEe
Confidence 8888876532 123357999999755443211 123468899999999999988764
No 266
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.88 E-value=1.5e-08 Score=79.00 Aligned_cols=110 Identities=15% Similarity=0.136 Sum_probs=82.9
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCc------ccCCCceEEeccCCCcccccCCCCCc
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPL------YDASKMNVFPCDVTEDDILNQVPHNS 150 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~------~~~~~i~~~~~d~~~~~~~~~~~~~~ 150 (218)
.+++.+||-||.|.|..++.+++..+..+++.+|+++.+++.+++.+. ....++.++..|.... ......+
T Consensus 81 ~p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~---l~~~~~~ 157 (294)
T 3o4f_A 81 HGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNF---VNQTSQT 157 (294)
T ss_dssp SSCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTT---TSCSSCC
T ss_pred CCCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHH---Hhhcccc
Confidence 356789999999999999999987666699999999999999998753 2246899999998762 2334568
Q ss_pred ccEEEechhhcCCCcc--hHHHHHHHHHHhccCCeEEEEEe
Q psy1107 151 VDIATLIFVLSAIHPN--KFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 151 ~D~i~~~~~l~~~~~~--~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
||+|+.-..-..-++. -...+++.+++.|+|||+++...
T Consensus 158 yDvIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~ 198 (294)
T 3o4f_A 158 FDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp EEEEEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEE
T ss_pred CCEEEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEec
Confidence 9999974321111111 12478899999999999988743
No 267
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.84 E-value=1.8e-09 Score=82.78 Aligned_cols=110 Identities=12% Similarity=0.044 Sum_probs=70.1
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEE
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIAT 155 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~ 155 (218)
...+..+|||+|||+|.|+..++...+..++.++|+.......+.. ....+.++.....+... ..++..++|+|+
T Consensus 87 ~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~-~~~~g~~ii~~~~~~dv----~~l~~~~~DvVL 161 (282)
T 3gcz_A 87 YVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIM-RTTLGWNLIRFKDKTDV----FNMEVIPGDTLL 161 (282)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CCBTTGGGEEEECSCCG----GGSCCCCCSEEE
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccccc-cccCCCceEEeeCCcch----hhcCCCCcCEEE
Confidence 3457789999999999999888866555689999987653111111 01112234433332211 234556899999
Q ss_pred echhhcCCCc---ch--HHHHHHHHHHhccCC--eEEEEEecC
Q psy1107 156 LIFVLSAIHP---NK--FSTVVKNLFIMLKSG--GIILFRDYG 191 (218)
Q Consensus 156 ~~~~l~~~~~---~~--~~~~l~~~~~~Lk~g--G~li~~~~~ 191 (218)
|..... ..- +. ...++..+.++|+|| |.|++--|.
T Consensus 162 SDmApn-sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 162 CDIGES-SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp ECCCCC-CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred ecCccC-CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 966544 211 11 123577778999999 999998887
No 268
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.79 E-value=3.1e-08 Score=79.99 Aligned_cols=112 Identities=13% Similarity=0.158 Sum_probs=75.8
Q ss_pred CCcEEEEecCCCchhHHHHhh--------cC-------CccEEEEEeCCHHHHHHHHhCCccc-------------CCCc
Q psy1107 79 GEGVLLEVGCGVGNFIFPLLS--------WS-------KICYIHACDISPRAVNFFKLNPLYD-------------ASKM 130 (218)
Q Consensus 79 ~~~~vLDiGcG~G~~~~~~~~--------~~-------~~~~v~~~D~s~~~~~~~~~~~~~~-------------~~~i 130 (218)
...+|+|+|||+|..+..++. .+ |..+++.-|+........-...... ..+.
T Consensus 52 ~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~ 131 (374)
T 3b5i_A 52 PPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRS 131 (374)
T ss_dssp CCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBC
T ss_pred CceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCc
Confidence 358999999999999887732 11 6678888887665443332221110 0011
Q ss_pred eEEe---ccCCCcccccCCCCCcccEEEechhhcCCC--cc----------------------------------hHHHH
Q psy1107 131 NVFP---CDVTEDDILNQVPHNSVDIATLIFVLSAIH--PN----------------------------------KFSTV 171 (218)
Q Consensus 131 ~~~~---~d~~~~~~~~~~~~~~~D~i~~~~~l~~~~--~~----------------------------------~~~~~ 171 (218)
.|.. +.+.. ..+|++++|+|+++.++|+++ |. |+..+
T Consensus 132 ~f~~gvpgSFy~----rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~f 207 (374)
T 3b5i_A 132 YFVAGVPGSFYR----RLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEF 207 (374)
T ss_dssp SEEEEEESCTTS----CCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHH
T ss_pred eEEEecChhhhc----ccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHH
Confidence 2322 23333 457888999999999999986 21 45567
Q ss_pred HHHHHHhccCCeEEEEEecCCCc
Q psy1107 172 VKNLFIMLKSGGIILFRDYGLHD 194 (218)
Q Consensus 172 l~~~~~~Lk~gG~li~~~~~~~~ 194 (218)
++...+.|+|||.+++.-.++.+
T Consensus 208 L~~ra~eL~pGG~mvl~~~gr~~ 230 (374)
T 3b5i_A 208 LRARAAEVKRGGAMFLVCLGRTS 230 (374)
T ss_dssp HHHHHHHEEEEEEEEEEEEECCC
T ss_pred HHHHHHHhCCCCEEEEEEecCCC
Confidence 88889999999999998766654
No 269
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.79 E-value=1.4e-07 Score=72.35 Aligned_cols=63 Identities=19% Similarity=0.211 Sum_probs=53.0
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCccc
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDI 142 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 142 (218)
...++.+|||+|||+|.++..++..+ ..+++++|+++.+++.++.+ . ..++.++++|+.+.++
T Consensus 28 ~~~~~~~VLDiG~G~G~lt~~L~~~~-~~~v~avEid~~~~~~~~~~-~--~~~v~~i~~D~~~~~~ 90 (249)
T 3ftd_A 28 NIEEGNTVVEVGGGTGNLTKVLLQHP-LKKLYVIELDREMVENLKSI-G--DERLEVINEDASKFPF 90 (249)
T ss_dssp TCCTTCEEEEEESCHHHHHHHHTTSC-CSEEEEECCCHHHHHHHTTS-C--CTTEEEECSCTTTCCG
T ss_pred CCCCcCEEEEEcCchHHHHHHHHHcC-CCeEEEEECCHHHHHHHHhc-c--CCCeEEEEcchhhCCh
Confidence 34567899999999999999999873 35999999999999999987 2 3589999999987543
No 270
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.78 E-value=3.3e-08 Score=76.66 Aligned_cols=76 Identities=13% Similarity=0.043 Sum_probs=60.2
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEE
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIAT 155 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~ 155 (218)
...++ +|||||||+|.++..++..+ .+|+++|+++.+++.++++.. ..++.++++|+.+.++... ..+|.|+
T Consensus 44 ~~~~~-~VLEIG~G~G~lt~~L~~~~--~~V~avEid~~~~~~l~~~~~--~~~v~vi~~D~l~~~~~~~---~~~~~iv 115 (271)
T 3fut_A 44 RPFTG-PVFEVGPGLGALTRALLEAG--AEVTAIEKDLRLRPVLEETLS--GLPVRLVFQDALLYPWEEV---PQGSLLV 115 (271)
T ss_dssp CCCCS-CEEEECCTTSHHHHHHHHTT--CCEEEEESCGGGHHHHHHHTT--TSSEEEEESCGGGSCGGGS---CTTEEEE
T ss_pred CCCCC-eEEEEeCchHHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcC--CCCEEEEECChhhCChhhc---cCccEEE
Confidence 34566 99999999999999999876 589999999999999998765 2589999999987433211 1578887
Q ss_pred echh
Q psy1107 156 LIFV 159 (218)
Q Consensus 156 ~~~~ 159 (218)
++-.
T Consensus 116 ~NlP 119 (271)
T 3fut_A 116 ANLP 119 (271)
T ss_dssp EEEC
T ss_pred ecCc
Confidence 6543
No 271
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.78 E-value=1.3e-08 Score=86.31 Aligned_cols=107 Identities=13% Similarity=0.136 Sum_probs=74.2
Q ss_pred CcEEEEecCCCchhHHHHhhcCC---------------ccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCccc
Q psy1107 80 EGVLLEVGCGVGNFIFPLLSWSK---------------ICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDI 142 (218)
Q Consensus 80 ~~~vLDiGcG~G~~~~~~~~~~~---------------~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~ 142 (218)
..+|||++||+|.++..++.... ...++|+|+++.++..|+.++...+ .++.+.++|....
T Consensus 245 ~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~-- 322 (544)
T 3khk_A 245 KGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLD-- 322 (544)
T ss_dssp SEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTS--
T ss_pred CCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcC--
Confidence 34999999999999887754311 3589999999999999998754333 2333466776542
Q ss_pred ccCCCCCcccEEEechhhcC-------------------------CCcc--hHHHHHHHHHHhccCCeEEEEEe
Q psy1107 143 LNQVPHNSVDIATLIFVLSA-------------------------IHPN--KFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 143 ~~~~~~~~~D~i~~~~~l~~-------------------------~~~~--~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
...+..+||+|+++-.+.. +++. .-..++..+.+.|+|||.+.++-
T Consensus 323 -~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVl 395 (544)
T 3khk_A 323 -DQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLL 395 (544)
T ss_dssp -CSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEE
T ss_pred -cccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEe
Confidence 2234568999999654332 2211 11258899999999999987754
No 272
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.76 E-value=9.7e-08 Score=80.92 Aligned_cols=111 Identities=14% Similarity=0.170 Sum_probs=79.3
Q ss_pred CCCcEEEEecCCCchhHHHHhhcC---CccEEEEEeCCHHHHHHHHhCCcccC---CCceEEeccCCCcccccCCCCCcc
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWS---KICYIHACDISPRAVNFFKLNPLYDA---SKMNVFPCDVTEDDILNQVPHNSV 151 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~---~~~~v~~~D~s~~~~~~~~~~~~~~~---~~i~~~~~d~~~~~~~~~~~~~~~ 151 (218)
.++.+|||++||+|.++..++... ....++|+|+++.++..|+.++...+ .++.+.++|....+++ .....+|
T Consensus 220 ~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p-~~~~~~f 298 (542)
T 3lkd_A 220 KQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWP-TQEPTNF 298 (542)
T ss_dssp CTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSC-CSSCCCB
T ss_pred CCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceeccccc-ccccccc
Confidence 467799999999999998887662 24689999999999999988754333 2567888888764221 1345689
Q ss_pred cEEEechhhcC-------------------CCc-c-hHHHHHHHHHHhcc-CCeEEEEEe
Q psy1107 152 DIATLIFVLSA-------------------IHP-N-KFSTVVKNLFIMLK-SGGIILFRD 189 (218)
Q Consensus 152 D~i~~~~~l~~-------------------~~~-~-~~~~~l~~~~~~Lk-~gG~li~~~ 189 (218)
|+|+++-.+.. +++ . .-..++..+.+.|+ |||++.++.
T Consensus 299 D~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~Vl 358 (542)
T 3lkd_A 299 DGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVL 358 (542)
T ss_dssp SEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEE
T ss_pred cEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEe
Confidence 99998533221 111 0 11247899999999 999987754
No 273
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.75 E-value=3.7e-08 Score=86.12 Aligned_cols=113 Identities=12% Similarity=0.049 Sum_probs=78.2
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhcC------------------------------------------CccEEEEEeCCH
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSWS------------------------------------------KICYIHACDISP 113 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~~------------------------------------------~~~~v~~~D~s~ 113 (218)
...++..+||++||+|.+++..+... +...++|+|+++
T Consensus 187 ~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~ 266 (703)
T 3v97_A 187 GWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDA 266 (703)
T ss_dssp TCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCH
T ss_pred CCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCH
Confidence 34567899999999999998877542 124899999999
Q ss_pred HHHHHHHhCCcccC--CCceEEeccCCCcccccCCCCCcccEEEechhhcC-C-CcchHHHHHHHH---HHhccCCeEEE
Q psy1107 114 RAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQVPHNSVDIATLIFVLSA-I-HPNKFSTVVKNL---FIMLKSGGIIL 186 (218)
Q Consensus 114 ~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~~~~~D~i~~~~~l~~-~-~~~~~~~~l~~~---~~~Lk~gG~li 186 (218)
.+++.|+.++...+ ..+.|.++|+.+.. .+...++||+|+++-.... + .......+...+ .+.+.|||.++
T Consensus 267 ~av~~A~~N~~~agv~~~i~~~~~D~~~~~--~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~~~g~~~~ 344 (703)
T 3v97_A 267 RVIQRARTNARLAGIGELITFEVKDVAQLT--NPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLS 344 (703)
T ss_dssp HHHHHHHHHHHHTTCGGGEEEEECCGGGCC--CSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred HHHHHHHHHHHHcCCCCceEEEECChhhCc--cccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhhCCCCeEE
Confidence 99999999976555 34899999987721 2233347999999743321 1 112334444444 44456899999
Q ss_pred EEec
Q psy1107 187 FRDY 190 (218)
Q Consensus 187 ~~~~ 190 (218)
+...
T Consensus 345 ilt~ 348 (703)
T 3v97_A 345 LFSA 348 (703)
T ss_dssp EEES
T ss_pred EEeC
Confidence 8763
No 274
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.74 E-value=3.6e-09 Score=81.57 Aligned_cols=81 Identities=19% Similarity=0.241 Sum_probs=61.2
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCH-------HHHHHHHhCCcccC--CCceEEeccCCCcccccCCC
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISP-------RAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQVP 147 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~-------~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~ 147 (218)
..++.+|||+|||+|.++..++..+ .+|+++|+++ .+++.++.+....+ .++.+++.|+.+. ...++
T Consensus 81 ~~~~~~VLDlgcG~G~~a~~lA~~g--~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~--l~~~~ 156 (258)
T 2r6z_A 81 HTAHPTVWDATAGLGRDSFVLASLG--LTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQ--MPALV 156 (258)
T ss_dssp GGGCCCEEETTCTTCHHHHHHHHTT--CCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHH--HHHHH
T ss_pred cCCcCeEEEeeCccCHHHHHHHHhC--CEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHH--HHhhh
Confidence 3456799999999999999999864 5899999999 99999988765433 3489999988652 11122
Q ss_pred C--CcccEEEechhhc
Q psy1107 148 H--NSVDIATLIFVLS 161 (218)
Q Consensus 148 ~--~~~D~i~~~~~l~ 161 (218)
. .+||+|++.-.+.
T Consensus 157 ~~~~~fD~V~~dP~~~ 172 (258)
T 2r6z_A 157 KTQGKPDIVYLDPMYP 172 (258)
T ss_dssp HHHCCCSEEEECCCC-
T ss_pred ccCCCccEEEECCCCC
Confidence 2 4799999865443
No 275
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.74 E-value=1.4e-08 Score=81.60 Aligned_cols=117 Identities=12% Similarity=0.099 Sum_probs=83.5
Q ss_pred HHHHhhhcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCccc-------CCCceEEeccCCCccc
Q psy1107 70 FHEFVNQDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYD-------ASKMNVFPCDVTEDDI 142 (218)
Q Consensus 70 ~~~~~~~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~-------~~~i~~~~~d~~~~~~ 142 (218)
+...+....++.+|||+|+|+|.-+..++.......+++.|+++..+..++++.... +.++.+...|....
T Consensus 139 l~~~~L~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~-- 216 (359)
T 4fzv_A 139 LPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKW-- 216 (359)
T ss_dssp HHHHHHCCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGH--
T ss_pred HHHHHhCCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhc--
Confidence 344446677889999999999999999998877678999999999988887764322 23567777776552
Q ss_pred ccCCCCCcccEEEechhhcC-------CCc--------c-------hHHHHHHHHHHhccCCeEEEEEe
Q psy1107 143 LNQVPHNSVDIATLIFVLSA-------IHP--------N-------KFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 143 ~~~~~~~~~D~i~~~~~l~~-------~~~--------~-------~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
.....+.||.|++-...+. -.+ + .+..++..+.++|||||.|+.+.
T Consensus 217 -~~~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsT 284 (359)
T 4fzv_A 217 -GELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYST 284 (359)
T ss_dssp -HHHSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred -chhccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEe
Confidence 2233458999997322111 011 1 13478888999999999999865
No 276
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.73 E-value=1.6e-08 Score=86.58 Aligned_cols=102 Identities=22% Similarity=0.239 Sum_probs=70.1
Q ss_pred CCcEEEEecCCCchhHHHHhhc----CCccEEEEEeCCHHHHHHHHhCCccc--CCCceEEeccCCCcccccCCCCCccc
Q psy1107 79 GEGVLLEVGCGVGNFIFPLLSW----SKICYIHACDISPRAVNFFKLNPLYD--ASKMNVFPCDVTEDDILNQVPHNSVD 152 (218)
Q Consensus 79 ~~~~vLDiGcG~G~~~~~~~~~----~~~~~v~~~D~s~~~~~~~~~~~~~~--~~~i~~~~~d~~~~~~~~~~~~~~~D 152 (218)
+...|||+|||+|.++...+.+ +...+|+++|-|+.+.. +++....+ +.+|.++++|+++- .+|+ ++|
T Consensus 357 ~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A~~-a~~~v~~N~~~dkVtVI~gd~eev----~LPE-KVD 430 (637)
T 4gqb_A 357 NVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAVV-TLENWQFEEWGSQVTVVSSDMREW----VAPE-KAD 430 (637)
T ss_dssp CEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHHHH-HHHHHHHHTTGGGEEEEESCTTTC----CCSS-CEE
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHHHH-HHHHHHhccCCCeEEEEeCcceec----cCCc-ccC
Confidence 4468999999999995544443 22347999999986554 44333322 36799999999883 3343 899
Q ss_pred EEEechhhcCCCcchHHHHHHHHHHhccCCeEEE
Q psy1107 153 IATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIIL 186 (218)
Q Consensus 153 ~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li 186 (218)
+|++-..-..+-.+....++....++|||||+++
T Consensus 431 IIVSEwMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 431 IIVSELLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp EEECCCCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred EEEEEcCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 9999554333333344567777789999999765
No 277
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.72 E-value=7.8e-08 Score=77.18 Aligned_cols=114 Identities=11% Similarity=0.116 Sum_probs=82.3
Q ss_pred CCCcEEEEecCCCchhHHHHhhc----------------CCccEEEEEeCCHHHHHHHHhCCcccC--CCceEEec---c
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSW----------------SKICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPC---D 136 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~----------------~~~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~---d 136 (218)
+...+|+|+||++|..+..++.. .|..+++.-|........+........ .+..|..+ .
T Consensus 50 ~~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgS 129 (359)
T 1m6e_X 50 TTRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGS 129 (359)
T ss_dssp SSEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESC
T ss_pred CCceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchh
Confidence 34578999999999888776654 356788999988887777776644211 12234333 3
Q ss_pred CCCcccccCCCCCcccEEEechhhcCCCc---c----------------------------hHHHHHHHHHHhccCCeEE
Q psy1107 137 VTEDDILNQVPHNSVDIATLIFVLSAIHP---N----------------------------KFSTVVKNLFIMLKSGGII 185 (218)
Q Consensus 137 ~~~~~~~~~~~~~~~D~i~~~~~l~~~~~---~----------------------------~~~~~l~~~~~~Lk~gG~l 185 (218)
+.. ..+|.+++|+|+++..+|+++. . |+..+|+...+.|+|||.+
T Consensus 130 Fy~----rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~m 205 (359)
T 1m6e_X 130 FYG----RLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRM 205 (359)
T ss_dssp SSS----CCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEE
T ss_pred hhh----ccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceE
Confidence 333 5678889999999999999852 1 3446688889999999999
Q ss_pred EEEecCCCch
Q psy1107 186 LFRDYGLHDM 195 (218)
Q Consensus 186 i~~~~~~~~~ 195 (218)
++.-.++.+.
T Consensus 206 vl~~~gr~~~ 215 (359)
T 1m6e_X 206 VLTILGRRSE 215 (359)
T ss_dssp EEEEEECSSS
T ss_pred EEEEecCCCC
Confidence 9987666553
No 278
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.71 E-value=5.8e-08 Score=75.63 Aligned_cols=64 Identities=14% Similarity=0.240 Sum_probs=53.4
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhcCCc--cEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCccc
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSWSKI--CYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDI 142 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~~~~--~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 142 (218)
...++.+|||||||+|.++..++..++. .+++++|+++.+++.++++. ..++.++++|+.+.++
T Consensus 39 ~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~---~~~v~~i~~D~~~~~~ 104 (279)
T 3uzu_A 39 RPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF---GELLELHAGDALTFDF 104 (279)
T ss_dssp CCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH---GGGEEEEESCGGGCCG
T ss_pred CCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc---CCCcEEEECChhcCCh
Confidence 3456789999999999999999987642 34999999999999999872 4579999999988544
No 279
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.70 E-value=1.4e-08 Score=87.27 Aligned_cols=107 Identities=14% Similarity=0.075 Sum_probs=71.8
Q ss_pred CcEEEEecCCCchhHHHHhhc----C---------CccEEEEEeCCHHHHHHHHhCCc-ccCCCceEEeccCCCccccc-
Q psy1107 80 EGVLLEVGCGVGNFIFPLLSW----S---------KICYIHACDISPRAVNFFKLNPL-YDASKMNVFPCDVTEDDILN- 144 (218)
Q Consensus 80 ~~~vLDiGcG~G~~~~~~~~~----~---------~~~~v~~~D~s~~~~~~~~~~~~-~~~~~i~~~~~d~~~~~~~~- 144 (218)
...|||+|||+|.++...+.+ + ...+|+++|-|+.++..++.... .....|.++.+|+++...+.
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~~ 489 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIAK 489 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhcccccc
Confidence 568999999999996433222 2 23499999999987766555433 22357999999998743210
Q ss_pred CCCCCcccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEE
Q psy1107 145 QVPHNSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIIL 186 (218)
Q Consensus 145 ~~~~~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li 186 (218)
.-...++|+|++...-.....+.....+..+.++|||||+++
T Consensus 490 ~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 490 DRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred cCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 001348999998554333222345567777789999999766
No 280
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.69 E-value=1.5e-07 Score=69.55 Aligned_cols=102 Identities=12% Similarity=0.039 Sum_probs=72.2
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC----CCceEEeccCCCcc------------
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA----SKMNVFPCDVTEDD------------ 141 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~----~~i~~~~~d~~~~~------------ 141 (218)
.+..+|||+||| ..+..+++. ++.+|+.+|.++...+.+++++...+ .++.++.+|+....
T Consensus 29 ~~a~~VLEiGtG--ySTl~lA~~-~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~ 105 (202)
T 3cvo_A 29 EEAEVILEYGSG--GSTVVAAEL-PGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWR 105 (202)
T ss_dssp HHCSEEEEESCS--HHHHHHHTS-TTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGG
T ss_pred hCCCEEEEECch--HHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhh
Confidence 457899999985 566666654 35799999999999999998766543 47899999865420
Q ss_pred -ccc------CC-CCCcccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 142 -ILN------QV-PHNSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 142 -~~~------~~-~~~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
+.. .. ..++||+|+.-.- .....+..+.+.|+|||++++-+
T Consensus 106 ~l~~~~~~i~~~~~~~~fDlIfIDg~-------k~~~~~~~~l~~l~~GG~Iv~DN 154 (202)
T 3cvo_A 106 SYPDYPLAVWRTEGFRHPDVVLVDGR-------FRVGCALATAFSITRPVTLLFDD 154 (202)
T ss_dssp GTTHHHHGGGGCTTCCCCSEEEECSS-------SHHHHHHHHHHHCSSCEEEEETT
T ss_pred hHHHHhhhhhccccCCCCCEEEEeCC-------CchhHHHHHHHhcCCCeEEEEeC
Confidence 000 12 2358999997531 22356666789999999887744
No 281
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.67 E-value=5.8e-08 Score=67.18 Aligned_cols=115 Identities=14% Similarity=0.100 Sum_probs=71.0
Q ss_pred CCCcEEEEecCCCc-hhHHHHhh-cCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEE
Q psy1107 78 VGEGVLLEVGCGVG-NFIFPLLS-WSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIAT 155 (218)
Q Consensus 78 ~~~~~vLDiGcG~G-~~~~~~~~-~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~ 155 (218)
.++.+|||||||+| ..+..+++ .+ ..|+++|+++.++. +++.|+++.... . -..||+|.
T Consensus 34 ~~~~rVlEVG~G~g~~vA~~La~~~g--~~V~atDInp~Av~--------------~v~dDiF~P~~~--~-Y~~~DLIY 94 (153)
T 2k4m_A 34 GPGTRVVEVGAGRFLYVSDYIRKHSK--VDLVLTDIKPSHGG--------------IVRDDITSPRME--I-YRGAALIY 94 (153)
T ss_dssp CSSSEEEEETCTTCCHHHHHHHHHSC--CEEEEECSSCSSTT--------------EECCCSSSCCHH--H-HTTEEEEE
T ss_pred CCCCcEEEEccCCChHHHHHHHHhCC--CeEEEEECCccccc--------------eEEccCCCCccc--c-cCCcCEEE
Confidence 44679999999999 58888886 44 68999999987655 777788763221 0 02799997
Q ss_pred echhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCCCchhhh-ccCCCCccCccceeccCCCC
Q psy1107 156 LIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLHDMAQM-RFKPGHKISENLYMRQDKTR 218 (218)
Q Consensus 156 ~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 218 (218)
+.. ||.++...+..+.+. -|.-+++...+......- ..+....-+..||.-..++|
T Consensus 95 sir-----PP~El~~~i~~lA~~--v~adliI~pL~~E~~~~~~~~kl~ny~g~~fY~~~~~~~ 151 (153)
T 2k4m_A 95 SIR-----PPAEIHSSLMRVADA--VGARLIIKPLTGEDIVTERKMKLVNYGRTYFYEYIAEVR 151 (153)
T ss_dssp EES-----CCTTTHHHHHHHHHH--HTCEEEEECBTTBCCCCCTTCEEEEETTEEEEEEECCCC
T ss_pred EcC-----CCHHHHHHHHHHHHH--cCCCEEEEcCCCCcCCCCCceEEEecCCceEEEEehhhc
Confidence 643 333444444444443 356688877665543211 12222233566776555543
No 282
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.66 E-value=1e-07 Score=83.20 Aligned_cols=108 Identities=16% Similarity=0.180 Sum_probs=72.8
Q ss_pred CCcEEEEecCCCchhHHHHhhcCC---ccEEEEEeCCHHHHHHH--HhCCcc----cC-CCceEEeccCCCcccccCCCC
Q psy1107 79 GEGVLLEVGCGVGNFIFPLLSWSK---ICYIHACDISPRAVNFF--KLNPLY----DA-SKMNVFPCDVTEDDILNQVPH 148 (218)
Q Consensus 79 ~~~~vLDiGcG~G~~~~~~~~~~~---~~~v~~~D~s~~~~~~~--~~~~~~----~~-~~i~~~~~d~~~~~~~~~~~~ 148 (218)
++.+|||+|||+|.++..++...+ ..+++|+|+++.+++.| +.+... .+ ....+...|+... .....
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~---~~~~~ 397 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSL---NPEDF 397 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGC---CGGGG
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcc---ccccc
Confidence 567999999999999999887653 35899999999999999 433322 11 1224444444431 12234
Q ss_pred CcccEEEechhhcC-CC-c-------------------------chHHHHHHHHHHhccCCeEEEEEe
Q psy1107 149 NSVDIATLIFVLSA-IH-P-------------------------NKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 149 ~~~D~i~~~~~l~~-~~-~-------------------------~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
.+||+|+++-.+.. .. + +....++..+.++|++||.+.+.-
T Consensus 398 ~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIl 465 (878)
T 3s1s_A 398 ANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIM 465 (878)
T ss_dssp TTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEE
Confidence 57999999654421 11 0 113457788999999999988865
No 283
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.64 E-value=4.2e-07 Score=73.52 Aligned_cols=114 Identities=16% Similarity=0.090 Sum_probs=73.4
Q ss_pred CcEEEEecCCCchhHHHHhhc-----------------CCccEEEEEeCC-----------HHHHHHHHhCCcccCCCce
Q psy1107 80 EGVLLEVGCGVGNFIFPLLSW-----------------SKICYIHACDIS-----------PRAVNFFKLNPLYDASKMN 131 (218)
Q Consensus 80 ~~~vLDiGcG~G~~~~~~~~~-----------------~~~~~v~~~D~s-----------~~~~~~~~~~~~~~~~~i~ 131 (218)
..+|+|+||++|..+..++.. .|..+++.-|+. +...+.+...... ..+..
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~-~~~~~ 131 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGR-KIGSC 131 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCC-CTTSE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccC-CCCce
Confidence 689999999999998877654 255678888876 2222222221110 01234
Q ss_pred EEeccCCCcccccCCCCCcccEEEechhhcCCC--cch-----------------------------------HHHHHHH
Q psy1107 132 VFPCDVTEDDILNQVPHNSVDIATLIFVLSAIH--PNK-----------------------------------FSTVVKN 174 (218)
Q Consensus 132 ~~~~d~~~~~~~~~~~~~~~D~i~~~~~l~~~~--~~~-----------------------------------~~~~l~~ 174 (218)
|..+.... -+-..+|.+++|+|+++.++|+++ |.. +..+|+.
T Consensus 132 f~~gvpgS-Fy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~ 210 (384)
T 2efj_A 132 LIGAMPGS-FYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRI 210 (384)
T ss_dssp EEEECCSC-TTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecchh-hhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 44442221 111467889999999999999986 211 1123666
Q ss_pred HHHhccCCeEEEEEecCCCch
Q psy1107 175 LFIMLKSGGIILFRDYGLHDM 195 (218)
Q Consensus 175 ~~~~Lk~gG~li~~~~~~~~~ 195 (218)
..+.|+|||.+++.-.++.+.
T Consensus 211 Ra~eL~pGG~mvl~~~gr~~~ 231 (384)
T 2efj_A 211 HSEELISRGRMLLTFICKEDE 231 (384)
T ss_dssp HHHHEEEEEEEEEEEECCCTT
T ss_pred HHHHhccCCeEEEEEecCCCc
Confidence 689999999999988776554
No 284
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.63 E-value=5.2e-08 Score=75.25 Aligned_cols=115 Identities=11% Similarity=0.044 Sum_probs=70.1
Q ss_pred hhcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEE
Q psy1107 75 NQDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIA 154 (218)
Q Consensus 75 ~~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i 154 (218)
....++.+|||+||++|.|+..+++..+...+.++|+.......... ....+.++.....++.. ..+....+|+|
T Consensus 77 ~l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~-~~~~~~~iv~~~~~~di----~~l~~~~~DlV 151 (300)
T 3eld_A 77 GYLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH-MQTLGWNIVKFKDKSNV----FTMPTEPSDTL 151 (300)
T ss_dssp TSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CCBTTGGGEEEECSCCT----TTSCCCCCSEE
T ss_pred CCCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc-ccccCCceEEeecCcee----eecCCCCcCEE
Confidence 34567899999999999999999876555588899986432100000 00111233333222111 23445689999
Q ss_pred EechhhcCCCc---ch--HHHHHHHHHHhccCC-eEEEEEecC--CCch
Q psy1107 155 TLIFVLSAIHP---NK--FSTVVKNLFIMLKSG-GIILFRDYG--LHDM 195 (218)
Q Consensus 155 ~~~~~l~~~~~---~~--~~~~l~~~~~~Lk~g-G~li~~~~~--~~~~ 195 (218)
++..... ... +. ...++..+..+|+|| |.|++--|. ..+.
T Consensus 152 lsD~APn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~~yG~~~ 199 (300)
T 3eld_A 152 LCDIGES-SSNPLVERDRTMKVLENFERWKHVNTENFCVKVLAPYHPDV 199 (300)
T ss_dssp EECCCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESSTTSHHH
T ss_pred eecCcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEeccccCccH
Confidence 9965443 211 11 124577778999999 999998877 4443
No 285
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.61 E-value=1.2e-08 Score=83.20 Aligned_cols=75 Identities=12% Similarity=0.007 Sum_probs=60.0
Q ss_pred CCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCccc--C-CCceEEeccCCCcccccCCCCCcccEEE
Q psy1107 79 GEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYD--A-SKMNVFPCDVTEDDILNQVPHNSVDIAT 155 (218)
Q Consensus 79 ~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~--~-~~i~~~~~d~~~~~~~~~~~~~~~D~i~ 155 (218)
++.+|||+|||+|..+..++..+ .+|+++|+|+.+++.++.++... + .++.++++|+.+.. ...+..+||+|+
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~g--~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L--~~~~~~~fDvV~ 168 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSKA--SQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYL--PLIKTFHPDYIY 168 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTTC--SEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSH--HHHHHHCCSEEE
T ss_pred CCCEEEEeCCCchHHHHHHHhcC--CEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhh--hhccCCCceEEE
Confidence 47899999999999999988765 59999999999999999987654 4 57999999987621 111224799999
Q ss_pred ec
Q psy1107 156 LI 157 (218)
Q Consensus 156 ~~ 157 (218)
+.
T Consensus 169 lD 170 (410)
T 3ll7_A 169 VD 170 (410)
T ss_dssp EC
T ss_pred EC
Confidence 83
No 286
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.59 E-value=1.1e-07 Score=72.94 Aligned_cols=63 Identities=10% Similarity=0.224 Sum_probs=50.1
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcc
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDD 141 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~ 141 (218)
...++.+|||||||+|.++. +. .+...+++++|+++.+++.++++.... .++.++++|+...+
T Consensus 18 ~~~~~~~VLEIG~G~G~lt~-l~-~~~~~~v~avEid~~~~~~a~~~~~~~-~~v~~i~~D~~~~~ 80 (252)
T 1qyr_A 18 NPQKGQAMVEIGPGLAALTE-PV-GERLDQLTVIELDRDLAARLQTHPFLG-PKLTIYQQDAMTFN 80 (252)
T ss_dssp CCCTTCCEEEECCTTTTTHH-HH-HTTCSCEEEECCCHHHHHHHHTCTTTG-GGEEEECSCGGGCC
T ss_pred CCCCcCEEEEECCCCcHHHH-hh-hCCCCeEEEEECCHHHHHHHHHHhccC-CceEEEECchhhCC
Confidence 34567899999999999999 65 343223999999999999999886543 47999999987743
No 287
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.51 E-value=7.5e-08 Score=74.04 Aligned_cols=80 Identities=13% Similarity=0.202 Sum_probs=56.8
Q ss_pred CCC--cEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHH-------HHHHHhCCcccC---CCceEEeccCCCcccccC
Q psy1107 78 VGE--GVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRA-------VNFFKLNPLYDA---SKMNVFPCDVTEDDILNQ 145 (218)
Q Consensus 78 ~~~--~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~-------~~~~~~~~~~~~---~~i~~~~~d~~~~~~~~~ 145 (218)
.++ .+|||+|||+|..+..++..+ .+|+++|.++.+ ++.++.+....+ .++.+++.|..+. ...
T Consensus 85 ~~g~~~~VLDl~~G~G~dal~lA~~g--~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~--L~~ 160 (258)
T 2oyr_A 85 KGDYLPDVVDATAGLGRDAFVLASVG--CRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTA--LTD 160 (258)
T ss_dssp BTTBCCCEEETTCTTCHHHHHHHHHT--CCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHH--STT
T ss_pred cCCCCCEEEEcCCcCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHH--HHh
Confidence 455 799999999999999999875 489999999975 444444333322 4688999987652 122
Q ss_pred CCCCcccEEEechhhcC
Q psy1107 146 VPHNSVDIATLIFVLSA 162 (218)
Q Consensus 146 ~~~~~~D~i~~~~~l~~ 162 (218)
++. +||+|++.-.+.+
T Consensus 161 ~~~-~fDvV~lDP~y~~ 176 (258)
T 2oyr_A 161 ITP-RPQVVYLDPMFPH 176 (258)
T ss_dssp CSS-CCSEEEECCCCCC
T ss_pred Ccc-cCCEEEEcCCCCC
Confidence 333 6999998654443
No 288
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.43 E-value=3.3e-07 Score=70.47 Aligned_cols=109 Identities=16% Similarity=0.133 Sum_probs=68.1
Q ss_pred cCCCcEEEEecCCCchhHHHHhhc-------CCc-----cEEEEEeCCH---HHHH-----------HHHhCCcc-----
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSW-------SKI-----CYIHACDISP---RAVN-----------FFKLNPLY----- 125 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~-------~~~-----~~v~~~D~s~---~~~~-----------~~~~~~~~----- 125 (218)
..+..+|||+|+|+|..+..++.. .|. .+++++|..+ ..+. .++.....
T Consensus 58 ~~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~ 137 (257)
T 2qy6_A 58 PHPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPL 137 (257)
T ss_dssp SSSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSC
T ss_pred CCCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccc
Confidence 345679999999999988776543 453 5899999876 3333 23322111
Q ss_pred ----------cCCCceEEeccCCCcccccCCCC---CcccEEEechhhcCCCcc-hHHHHHHHHHHhccCCeEEEE
Q psy1107 126 ----------DASKMNVFPCDVTEDDILNQVPH---NSVDIATLIFVLSAIHPN-KFSTVVKNLFIMLKSGGIILF 187 (218)
Q Consensus 126 ----------~~~~i~~~~~d~~~~~~~~~~~~---~~~D~i~~~~~l~~~~~~-~~~~~l~~~~~~Lk~gG~li~ 187 (218)
...++.+..+|+.+. ....+. ..||+|+....-..-.|+ -...++..+.++|+|||.|+.
T Consensus 138 ~g~~r~~~~~~~~~l~l~~GDa~~~--l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 138 PGCHRLLLDEGRVTLDLWFGDINEL--ISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp SEEEEEEEC--CEEEEEEESCHHHH--GGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEE
T ss_pred cchhheeccCCceEEEEEECcHHHH--HhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEE
Confidence 113566777887652 112222 279999984211111112 135789999999999998886
No 289
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.42 E-value=5.2e-07 Score=70.12 Aligned_cols=110 Identities=15% Similarity=0.141 Sum_probs=77.5
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhcC-----CccEEEEEeCCHH--------------------------HHHHHHhCCc
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSWS-----KICYIHACDISPR--------------------------AVNFFKLNPL 124 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~~-----~~~~v~~~D~s~~--------------------------~~~~~~~~~~ 124 (218)
....+..|||+|+..|..+..++... ++.+++++|.... .++.+++++.
T Consensus 103 ~~~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~ 182 (282)
T 2wk1_A 103 GNNVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFR 182 (282)
T ss_dssp HTTCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHH
T ss_pred hcCCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHH
Confidence 34567899999999999988887542 4679999996421 2444555544
Q ss_pred cc---CCCceEEeccCCCcccccCCCCCcccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 125 YD---ASKMNVFPCDVTEDDILNQVPHNSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 125 ~~---~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
.. ..++.++.+|+.+. ...++.++||+|+.-.-. .+.....++.+...|+|||++++-++.
T Consensus 183 ~~gl~~~~I~li~Gda~et--L~~~~~~~~d~vfIDaD~----y~~~~~~Le~~~p~L~pGGiIv~DD~~ 246 (282)
T 2wk1_A 183 NYDLLDEQVRFLPGWFKDT--LPTAPIDTLAVLRMDGDL----YESTWDTLTNLYPKVSVGGYVIVDDYM 246 (282)
T ss_dssp HTTCCSTTEEEEESCHHHH--STTCCCCCEEEEEECCCS----HHHHHHHHHHHGGGEEEEEEEEESSCT
T ss_pred HcCCCcCceEEEEeCHHHH--HhhCCCCCEEEEEEcCCc----cccHHHHHHHHHhhcCCCEEEEEcCCC
Confidence 33 25799999988552 223445689999875321 123457889999999999999987764
No 290
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.32 E-value=9e-07 Score=71.18 Aligned_cols=110 Identities=11% Similarity=0.026 Sum_probs=75.1
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCccc---------CCCceEEeccCCCcccccCCCC
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYD---------ASKMNVFPCDVTEDDILNQVPH 148 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~---------~~~i~~~~~d~~~~~~~~~~~~ 148 (218)
.++.+||-||.|.|..++.+++..+ .+++.+|+++.+++.+++.+... ..++.++..|.........-..
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh~~-~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~ 282 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 282 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCCeEEEECCCcHHHHHHHHhcCC-ceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhcc
Confidence 4568999999999999999987654 69999999999999999864321 1347777787654110001123
Q ss_pred CcccEEEechhhc---CCC--cc---hHHHHHHHHHHhccCCeEEEEE
Q psy1107 149 NSVDIATLIFVLS---AIH--PN---KFSTVVKNLFIMLKSGGIILFR 188 (218)
Q Consensus 149 ~~~D~i~~~~~l~---~~~--~~---~~~~~l~~~~~~Lk~gG~li~~ 188 (218)
.+||+|+.-..-. ..+ +. -...+++.+++.|+|||+++.-
T Consensus 283 ~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q 330 (381)
T 3c6k_A 283 REFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQ 330 (381)
T ss_dssp CCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred CceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 4799999742111 111 01 1246788899999999988763
No 291
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.31 E-value=2.4e-06 Score=72.40 Aligned_cols=115 Identities=13% Similarity=0.128 Sum_probs=74.5
Q ss_pred hhcCCCcEEEEecCCCchhHHHHhhc----C---------CccEEEEEeCCHHHHHHHHhCCcccC-CCceEEeccCCCc
Q psy1107 75 NQDVGEGVLLEVGCGVGNFIFPLLSW----S---------KICYIHACDISPRAVNFFKLNPLYDA-SKMNVFPCDVTED 140 (218)
Q Consensus 75 ~~~~~~~~vLDiGcG~G~~~~~~~~~----~---------~~~~v~~~D~s~~~~~~~~~~~~~~~-~~i~~~~~d~~~~ 140 (218)
....++.+|+|++||+|.++..+.+. . ....++|+|+++.+...|+-++-..+ ....+.++|....
T Consensus 213 ~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~~~~I~~~dtL~~ 292 (530)
T 3ufb_A 213 MDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEYPRIDPENSLRF 292 (530)
T ss_dssp HCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCSCCEEECSCTTCS
T ss_pred hccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCccccccccccccC
Confidence 34556779999999999998776543 1 12369999999999999987644333 2345666766543
Q ss_pred ccccCCCCCcccEEEechhhcCC-------------Cc-chHHHHHHHHHHhcc-------CCeEEEEEe
Q psy1107 141 DILNQVPHNSVDIATLIFVLSAI-------------HP-NKFSTVVKNLFIMLK-------SGGIILFRD 189 (218)
Q Consensus 141 ~~~~~~~~~~~D~i~~~~~l~~~-------------~~-~~~~~~l~~~~~~Lk-------~gG~li~~~ 189 (218)
......+..+||+|+++-.+..- +. .....++..+.+.|| +||++.++-
T Consensus 293 ~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVl 362 (530)
T 3ufb_A 293 PLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVV 362 (530)
T ss_dssp CGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEE
T ss_pred chhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEe
Confidence 22222334579999996544211 00 112356677777776 699887754
No 292
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.29 E-value=3.3e-06 Score=65.15 Aligned_cols=85 Identities=16% Similarity=0.055 Sum_probs=63.8
Q ss_pred chHHHHHHhhhcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCccc-cc
Q psy1107 66 TVNEFHEFVNQDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDI-LN 144 (218)
Q Consensus 66 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-~~ 144 (218)
+.....+.+ ...++..+||.+||.|..+..+++. ..+++|+|.++.+++.+++ ... .++.+++.++.+... ..
T Consensus 10 Ll~e~le~L-~~~~gg~~VD~T~G~GGHS~~il~~--~g~VigiD~Dp~Ai~~A~~-L~~--~rv~lv~~~f~~l~~~L~ 83 (285)
T 1wg8_A 10 LYQEALDLL-AVRPGGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKG-LHL--PGLTVVQGNFRHLKRHLA 83 (285)
T ss_dssp THHHHHHHH-TCCTTCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHH-TCC--TTEEEEESCGGGHHHHHH
T ss_pred HHHHHHHhh-CCCCCCEEEEeCCCCcHHHHHHHHC--CCEEEEEeCCHHHHHHHHh-hcc--CCEEEEECCcchHHHHHH
Confidence 334444442 3456789999999999999999987 4699999999999999998 554 589999999877431 11
Q ss_pred CCCCCcccEEEe
Q psy1107 145 QVPHNSVDIATL 156 (218)
Q Consensus 145 ~~~~~~~D~i~~ 156 (218)
....+++|.|++
T Consensus 84 ~~g~~~vDgIL~ 95 (285)
T 1wg8_A 84 ALGVERVDGILA 95 (285)
T ss_dssp HTTCSCEEEEEE
T ss_pred HcCCCCcCEEEe
Confidence 222347898886
No 293
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=98.18 E-value=1.3e-05 Score=59.85 Aligned_cols=111 Identities=15% Similarity=0.120 Sum_probs=72.0
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC-CCceEEec-cCCCcccccCCCCCcccE
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA-SKMNVFPC-DVTEDDILNQVPHNSVDI 153 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~-~~i~~~~~-d~~~~~~~~~~~~~~~D~ 153 (218)
...+..+|||+||++|.++..++......+|+++|+-..--+.-+ .....+ ..+.|..+ |+.. .+..++|+
T Consensus 75 ~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~-~~~s~gwn~v~fk~gvDv~~------~~~~~~Dt 147 (267)
T 3p8z_A 75 MVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPV-PMSTYGWNIVKLMSGKDVFY------LPPEKCDT 147 (267)
T ss_dssp SSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCC-CCCCTTTTSEEEECSCCGGG------CCCCCCSE
T ss_pred CCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcc-hhhhcCcCceEEEeccceee------cCCccccE
Confidence 346778999999999999987877654458999998553221000 112223 45788877 8643 22246999
Q ss_pred EEechhhcCCCcc-hH---HHHHHHHHHhccCCeEEEEEecCCCc
Q psy1107 154 ATLIFVLSAIHPN-KF---STVVKNLFIMLKSGGIILFRDYGLHD 194 (218)
Q Consensus 154 i~~~~~l~~~~~~-~~---~~~l~~~~~~Lk~gG~li~~~~~~~~ 194 (218)
|+|...-..-.+. +. ..+++.+.++|++ |-++|--+.+..
T Consensus 148 llcDIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py~ 191 (267)
T 3p8z_A 148 LLCDIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPYM 191 (267)
T ss_dssp EEECCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCCS
T ss_pred EEEecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccCCC
Confidence 9995543222221 22 3467777899998 788887776666
No 294
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.17 E-value=1.8e-05 Score=63.48 Aligned_cols=95 Identities=13% Similarity=0.092 Sum_probs=63.4
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEe
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATL 156 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~ 156 (218)
..++.++||+||++|.|+..+++.+ .+|+++|..+-. ..+.. ..++.++..|... ...+..++|+|+|
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~rg--~~V~aVD~~~l~-~~l~~-----~~~V~~~~~d~~~----~~~~~~~~D~vvs 276 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKRN--MWVYSVDNGPMA-QSLMD-----TGQVTWLREDGFK----FRPTRSNISWMVC 276 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHTT--CEEEEECSSCCC-HHHHT-----TTCEEEECSCTTT----CCCCSSCEEEEEE
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHCC--CEEEEEEhhhcC-hhhcc-----CCCeEEEeCcccc----ccCCCCCcCEEEE
Confidence 4678999999999999999998876 699999976422 11111 2578898988776 3334568999998
Q ss_pred chhhcCCCcchHHHHHHHHHHhcc---CCeEEEEEe
Q psy1107 157 IFVLSAIHPNKFSTVVKNLFIMLK---SGGIILFRD 189 (218)
Q Consensus 157 ~~~l~~~~~~~~~~~l~~~~~~Lk---~gG~li~~~ 189 (218)
..+. .+..+...+.++|. .++.++..-
T Consensus 277 Dm~~------~p~~~~~l~~~wl~~~~~~~aI~~lK 306 (375)
T 4auk_A 277 DMVE------KPAKVAALMAQWLVNGWCRETIFNLK 306 (375)
T ss_dssp CCSS------CHHHHHHHHHHHHHTTSCSEEEEEEE
T ss_pred cCCC------ChHHhHHHHHHHHhccccceEEEEEE
Confidence 6542 23344444444444 446555443
No 295
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.04 E-value=2.1e-05 Score=59.57 Aligned_cols=107 Identities=12% Similarity=0.040 Sum_probs=62.5
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCc---eEEec-cCCCcccccCCCCCcc
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKM---NVFPC-DVTEDDILNQVPHNSV 151 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i---~~~~~-d~~~~~~~~~~~~~~~ 151 (218)
...++.+|||+||++|.|+..++..-....+.|.++.... .. .-.......+ .|..+ |+++ +...++
T Consensus 70 likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~--~~-~P~~~~~~Gv~~i~~~~G~Df~~------~~~~~~ 140 (269)
T 2px2_A 70 FVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG--HE-EPMLMQSYGWNIVTMKSGVDVFY------KPSEIS 140 (269)
T ss_dssp SCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT--SC-CCCCCCSTTGGGEEEECSCCGGG------SCCCCC
T ss_pred CCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc--cc-CCCcccCCCceEEEeeccCCccC------CCCCCC
Confidence 4567899999999999999888876211233444332210 00 0011010233 33335 8865 223479
Q ss_pred cEEEechhhcCCC--cchHH---HHHHHHHHhccCCe-EEEEEecCC
Q psy1107 152 DIATLIFVLSAIH--PNKFS---TVVKNLFIMLKSGG-IILFRDYGL 192 (218)
Q Consensus 152 D~i~~~~~l~~~~--~~~~~---~~l~~~~~~Lk~gG-~li~~~~~~ 192 (218)
|+|+|-..-. .. .-|.. .++.-+.++|+||| -|++--|.+
T Consensus 141 DvVLSDMAPn-SG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFqg 186 (269)
T 2px2_A 141 DTLLCDIGES-SPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILCP 186 (269)
T ss_dssp SEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCT
T ss_pred CEEEeCCCCC-CCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECCC
Confidence 9999965432 21 11111 25677789999999 999987774
No 296
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=98.00 E-value=6.2e-05 Score=59.98 Aligned_cols=112 Identities=15% Similarity=0.175 Sum_probs=83.6
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCccc----------------------CCCceEEec
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYD----------------------ASKMNVFPC 135 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~----------------------~~~i~~~~~ 135 (218)
.+..+|+.+|||.......+...++...++-+|. |.+++.-++.+... ..+.+++.+
T Consensus 96 ~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~ 174 (334)
T 1rjd_A 96 NEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAAC 174 (334)
T ss_dssp CSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEEC
T ss_pred CCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEec
Confidence 5678999999999998888876556678888887 76666655543221 257889999
Q ss_pred cCCCcccc----cCC-CCCcccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 136 DVTEDDIL----NQV-PHNSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 136 d~~~~~~~----~~~-~~~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
|+.+.++. ... ......++++..++.+++++....+++.+.... |+|.+++.++-
T Consensus 175 DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i 234 (334)
T 1rjd_A 175 DLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPI 234 (334)
T ss_dssp CTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEEC
T ss_pred CCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEecc
Confidence 99985431 222 234568999999999999999999999888876 78877766643
No 297
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.94 E-value=5.3e-05 Score=58.41 Aligned_cols=109 Identities=11% Similarity=0.048 Sum_probs=68.4
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC-CCceEEec-cCCCcccccCCCCCcccE
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA-SKMNVFPC-DVTEDDILNQVPHNSVDI 153 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~-~~i~~~~~-d~~~~~~~~~~~~~~~D~ 153 (218)
...+...|||+||++|.++..++......+|+|+|+-..--+.- ......+ .-+.+... |+.. ++..++|+
T Consensus 91 ~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P-~~~~ql~w~lV~~~~~~Dv~~------l~~~~~D~ 163 (321)
T 3lkz_A 91 FLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEP-QLVQSYGWNIVTMKSGVDVFY------RPSECCDT 163 (321)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCC-CCCCBTTGGGEEEECSCCTTS------SCCCCCSE
T ss_pred CCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCc-chhhhcCCcceEEEeccCHhh------CCCCCCCE
Confidence 34677899999999999998787765445899999855411000 0011122 22556554 6644 12246999
Q ss_pred EEechhhcCCC-cc-h---HHHHHHHHHHhccCC-eEEEEEecCC
Q psy1107 154 ATLIFVLSAIH-PN-K---FSTVVKNLFIMLKSG-GIILFRDYGL 192 (218)
Q Consensus 154 i~~~~~l~~~~-~~-~---~~~~l~~~~~~Lk~g-G~li~~~~~~ 192 (218)
|+|... ..-+ +. + ...+|+.+.++|++| |-|+|--+.+
T Consensus 164 ivcDig-eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~p 207 (321)
T 3lkz_A 164 LLCDIG-ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCP 207 (321)
T ss_dssp EEECCC-CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCT
T ss_pred EEEECc-cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCC
Confidence 998544 2222 11 2 234677778999999 8899877766
No 298
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.69 E-value=0.00013 Score=57.61 Aligned_cols=87 Identities=16% Similarity=0.120 Sum_probs=63.3
Q ss_pred cchHHHHHHhhhcCCCcEEEEecCCCchhHHHHhhc-CCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccc
Q psy1107 65 WTVNEFHEFVNQDVGEGVLLEVGCGVGNFIFPLLSW-SKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDIL 143 (218)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~~~~~-~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 143 (218)
.+..+..+. ....++..++|..||.|..+..+++. +|..+++|+|.++.+++.++ +. ...++.+++.++.+..-.
T Consensus 44 VLl~Evl~~-L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL--~~~Rv~lv~~nF~~l~~~ 119 (347)
T 3tka_A 44 VLLDEAVNG-LNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI--DDPRFSIIHGPFSALGEY 119 (347)
T ss_dssp TTTHHHHHH-TCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC--CCTTEEEEESCGGGHHHH
T ss_pred ccHHHHHHh-hCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh--cCCcEEEEeCCHHHHHHH
Confidence 344444444 23567889999999999999999877 57789999999999999995 33 246889999988764211
Q ss_pred c---CCCCCcccEEEe
Q psy1107 144 N---QVPHNSVDIATL 156 (218)
Q Consensus 144 ~---~~~~~~~D~i~~ 156 (218)
. .+. +++|.|++
T Consensus 120 L~~~g~~-~~vDgILf 134 (347)
T 3tka_A 120 VAERDLI-GKIDGILL 134 (347)
T ss_dssp HHHTTCT-TCEEEEEE
T ss_pred HHhcCCC-CcccEEEE
Confidence 1 121 25888887
No 299
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.69 E-value=3.8e-05 Score=60.24 Aligned_cols=47 Identities=17% Similarity=0.232 Sum_probs=41.2
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcc
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLY 125 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~ 125 (218)
..++..|||++||+|..+..++..+ .+++|+|+++.+++.+++++..
T Consensus 233 ~~~~~~vlD~f~GsGt~~~~a~~~g--~~~~g~e~~~~~~~~a~~r~~~ 279 (297)
T 2zig_A 233 SFVGDVVLDPFAGTGTTLIAAARWG--RRALGVELVPRYAQLAKERFAR 279 (297)
T ss_dssp CCTTCEEEETTCTTTHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCCCEEEECCCCCCHHHHHHHHcC--CeEEEEeCCHHHHHHHHHHHHH
Confidence 3578899999999999999988876 5999999999999999987543
No 300
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=97.62 E-value=0.00016 Score=57.07 Aligned_cols=112 Identities=12% Similarity=0.070 Sum_probs=81.0
Q ss_pred CCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcc----cCCCceEEeccCCCcccccC-----CCCC
Q psy1107 79 GEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLY----DASKMNVFPCDVTEDDILNQ-----VPHN 149 (218)
Q Consensus 79 ~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~----~~~~i~~~~~d~~~~~~~~~-----~~~~ 149 (218)
...+|+++|||--.....+.. .+...++-+| .|.+++..++.... ...+.+++.+|+.+ ++... +...
T Consensus 102 g~~QvV~LGaGlDTra~Rl~~-~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~~ 178 (310)
T 2uyo_A 102 GIRQFVILASGLDSRAYRLDW-PTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DWPPALRSAGFDPS 178 (310)
T ss_dssp TCCEEEEETCTTCCHHHHSCC-CTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CHHHHHHHTTCCTT
T ss_pred CCCeEEEeCCCCCchhhhccC-CCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hHHHHHHhccCCCC
Confidence 346899999997666544431 2236899999 58888887776542 23578899999987 44322 2223
Q ss_pred cccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCCC
Q psy1107 150 SVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLH 193 (218)
Q Consensus 150 ~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~~ 193 (218)
.-=++++..++++++++....+++.+...+.||+.+++......
T Consensus 179 ~Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~~~ 222 (310)
T 2uyo_A 179 ARTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSPLH 222 (310)
T ss_dssp SCEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCCTT
T ss_pred CCEEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecCCC
Confidence 34578888899999988889999999998889998888665543
No 301
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.54 E-value=3.7e-05 Score=75.63 Aligned_cols=105 Identities=17% Similarity=0.127 Sum_probs=52.5
Q ss_pred CCCcEEEEecCCCchhHHHHhhcC---C--ccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCccc
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWS---K--ICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVD 152 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~---~--~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D 152 (218)
.+..+|||||.|+|..+..+.... + ..+|+..|+|+...+.++++++.. .+.....|..+ ..++...+||
T Consensus 1239 ~~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~--di~~~~~d~~~---~~~~~~~~yd 1313 (2512)
T 2vz8_A 1239 SPKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL--HVTQGQWDPAN---PAPGSLGKAD 1313 (2512)
T ss_dssp SSEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH--TEEEECCCSSC---CCC-----CC
T ss_pred CCCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc--ccccccccccc---cccCCCCcee
Confidence 467899999999998776654432 1 247999999987776666554321 12221122221 0122345799
Q ss_pred EEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 153 IATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 153 ~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
+|++..+++.. .+....+..++++|||||++++.+
T Consensus 1314 lvia~~vl~~t--~~~~~~l~~~~~lL~p~G~l~~~e 1348 (2512)
T 2vz8_A 1314 LLVCNCALATL--GDPAVAVGNMAATLKEGGFLLLHT 1348 (2512)
T ss_dssp EEEEECC----------------------CCEEEEEE
T ss_pred EEEEccccccc--ccHHHHHHHHHHhcCCCcEEEEEe
Confidence 99999988755 366788999999999999998865
No 302
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.51 E-value=0.00028 Score=56.52 Aligned_cols=60 Identities=13% Similarity=-0.012 Sum_probs=50.0
Q ss_pred CCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCc
Q psy1107 79 GEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTED 140 (218)
Q Consensus 79 ~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~ 140 (218)
++..|||||.|.|.++..+++.....+++++|+++..+..++... . ..++.++.+|+.+.
T Consensus 58 ~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~-~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 58 EELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-E-GSPLQILKRDPYDW 117 (353)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-T-TSSCEEECSCTTCH
T ss_pred CCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-c-CCCEEEEECCccch
Confidence 358999999999999999997632248999999999999998765 2 36899999999764
No 303
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=97.37 E-value=0.00025 Score=54.73 Aligned_cols=114 Identities=15% Similarity=0.102 Sum_probs=79.3
Q ss_pred HHHHHhhhcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCC
Q psy1107 69 EFHEFVNQDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPH 148 (218)
Q Consensus 69 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~ 148 (218)
.+..++... ++..+||+-+|||.+++++++.. -+++.+|.++..++..++++.. ..++.++..|.........-+.
T Consensus 82 ~yf~~l~~~-n~~~~LDlfaGSGaLgiEaLS~~--d~~vfvE~~~~a~~~L~~Nl~~-~~~~~V~~~D~~~~L~~l~~~~ 157 (283)
T 2oo3_A 82 EYISVIKQI-NLNSTLSYYPGSPYFAINQLRSQ--DRLYLCELHPTEYNFLLKLPHF-NKKVYVNHTDGVSKLNALLPPP 157 (283)
T ss_dssp HHHHHHHHH-SSSSSCCEEECHHHHHHHHSCTT--SEEEEECCSHHHHHHHTTSCCT-TSCEEEECSCHHHHHHHHCSCT
T ss_pred HHHHHHHHh-cCCCceeEeCCcHHHHHHHcCCC--CeEEEEeCCHHHHHHHHHHhCc-CCcEEEEeCcHHHHHHHhcCCC
Confidence 344444332 45678999999999999998844 4999999999999999999865 4578888888654211111223
Q ss_pred CcccEEEechhhcCCCcchHHHHHHHHHH--hccCCeEEEEE
Q psy1107 149 NSVDIATLIFVLSAIHPNKFSTVVKNLFI--MLKSGGIILFR 188 (218)
Q Consensus 149 ~~~D~i~~~~~l~~~~~~~~~~~l~~~~~--~Lk~gG~li~~ 188 (218)
.+||+|++--.... .++...++..+.+ .+.|+|.+++.
T Consensus 158 ~~fdLVfiDPPYe~--k~~~~~vl~~L~~~~~r~~~Gi~v~W 197 (283)
T 2oo3_A 158 EKRGLIFIDPSYER--KEEYKEIPYAIKNAYSKFSTGLYCVW 197 (283)
T ss_dssp TSCEEEEECCCCCS--TTHHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred CCccEEEECCCCCC--CcHHHHHHHHHHHhCccCCCeEEEEE
Confidence 47999998533221 1356677766654 45689988885
No 304
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.17 E-value=0.00061 Score=52.62 Aligned_cols=101 Identities=13% Similarity=0.073 Sum_probs=65.2
Q ss_pred cCCCcEEEEecC------CCchhHHHHhhcCCc-cEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCC
Q psy1107 77 DVGEGVLLEVGC------GVGNFIFPLLSWSKI-CYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHN 149 (218)
Q Consensus 77 ~~~~~~vLDiGc------G~G~~~~~~~~~~~~-~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~ 149 (218)
.+.+.+|||+|+ -+|.+ .+.+.+|. +.++++|+.+-. .... .++++|..... ..+
T Consensus 107 vp~gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~VVavDL~~~~----------sda~-~~IqGD~~~~~-----~~~ 168 (344)
T 3r24_A 107 VPYNMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTLLVDSDLNDFV----------SDAD-STLIGDCATVH-----TAN 168 (344)
T ss_dssp CCTTCEEEEESCCCTTSBCHHHH--HHHHHSCTTCEEEEEESSCCB----------CSSS-EEEESCGGGEE-----ESS
T ss_pred ecCCCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcEEEEeeCcccc----------cCCC-eEEEccccccc-----cCC
Confidence 356789999997 46663 33344665 599999996632 0112 45888865411 135
Q ss_pred cccEEEechhh--c-CCC------cchHHHHHHHHHHhccCCeEEEEEecCCCch
Q psy1107 150 SVDIATLIFVL--S-AIH------PNKFSTVVKNLFIMLKSGGIILFRDYGLHDM 195 (218)
Q Consensus 150 ~~D~i~~~~~l--~-~~~------~~~~~~~l~~~~~~Lk~gG~li~~~~~~~~~ 195 (218)
+||+|++-..- . +.. ..-.+..+.-+.+.|+|||-|++--+.....
T Consensus 169 k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQGsg~ 223 (344)
T 3r24_A 169 KWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHSWN 223 (344)
T ss_dssp CEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSSCC
T ss_pred CCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecCCCH
Confidence 89999984321 1 111 1135677788899999999999987766653
No 305
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.05 E-value=0.00055 Score=52.54 Aligned_cols=46 Identities=15% Similarity=0.138 Sum_probs=40.6
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCc
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPL 124 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~ 124 (218)
..++..|||+.||+|..+..+...+ .+++|+|+++..++.+++++.
T Consensus 210 ~~~~~~vlD~f~GsGtt~~~a~~~g--r~~ig~e~~~~~~~~~~~r~~ 255 (260)
T 1g60_A 210 SNPNDLVLDCFMGSGTTAIVAKKLG--RNFIGCDMNAEYVNQANFVLN 255 (260)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHH
T ss_pred CCCCCEEEECCCCCCHHHHHHHHcC--CeEEEEeCCHHHHHHHHHHHH
Confidence 4678899999999999999888776 699999999999999988754
No 306
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=96.79 E-value=0.0079 Score=48.64 Aligned_cols=79 Identities=14% Similarity=-0.051 Sum_probs=57.0
Q ss_pred cEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCccccc----CCCCCcccEEEe
Q psy1107 81 GVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILN----QVPHNSVDIATL 156 (218)
Q Consensus 81 ~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~----~~~~~~~D~i~~ 156 (218)
.+++|+.||.|.++..+...+-. .+.++|+++.+++..+.+.. +..+++.|+.+..... ......+|+|+.
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~-~v~avE~d~~a~~t~~~N~~----~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~g 77 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFD-VKMAVEIDQHAINTHAINFP----RSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIG 77 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCE-EEEEECSCHHHHHHHHHHCT----TSEEECCCGGGCCHHHHHHHHCSCCCCCEEEE
T ss_pred CeEEEEccCcCHHHHHHHHCCCc-EEEEEeCCHHHHHHHHHhCC----CCceEecChhhcCHHHHHhhcccCCCeeEEEe
Confidence 58999999999999999887732 67799999999998887643 4567778887642110 013357999998
Q ss_pred chhhcCCC
Q psy1107 157 IFVLSAIH 164 (218)
Q Consensus 157 ~~~l~~~~ 164 (218)
......++
T Consensus 78 gpPCQ~fS 85 (376)
T 3g7u_A 78 GPPCQGFS 85 (376)
T ss_dssp CCCCCTTC
T ss_pred cCCCCCcc
Confidence 65544443
No 307
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=96.69 E-value=0.0063 Score=46.44 Aligned_cols=110 Identities=16% Similarity=0.162 Sum_probs=71.1
Q ss_pred CCCcEEEEecCCCchhHHHHhhc-------CCccEEEEEe-----CCHH----------------------HHHH---HH
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSW-------SKICYIHACD-----ISPR----------------------AVNF---FK 120 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~-------~~~~~v~~~D-----~s~~----------------------~~~~---~~ 120 (218)
.-+..|+|+|+-.|..+..++.. ++..+++++| ..+. .+.. ..
T Consensus 68 ~vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~ 147 (257)
T 3tos_A 68 DVPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAH 147 (257)
T ss_dssp TSCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHH
T ss_pred CCCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHH
Confidence 44679999999999988876542 4567999999 2210 0111 11
Q ss_pred hC---CcccCCCceEEeccCCCcc--cccCCCCCcccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 121 LN---PLYDASKMNVFPCDVTEDD--ILNQVPHNSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 121 ~~---~~~~~~~i~~~~~d~~~~~--~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
++ ......++.++.+++.+.. +....+..++|+|..-.- . .+.....++.+...|+|||++++-+|.
T Consensus 148 ~~~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D---~-Y~~t~~~le~~~p~l~~GGvIv~DD~~ 219 (257)
T 3tos_A 148 ECSDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLD---L-YEPTKAVLEAIRPYLTKGSIVAFDELD 219 (257)
T ss_dssp HTTSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCC---C-HHHHHHHHHHHGGGEEEEEEEEESSTT
T ss_pred hhhhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCc---c-cchHHHHHHHHHHHhCCCcEEEEcCCC
Confidence 12 1112367999999876531 111234557999987542 1 234556788899999999999998874
No 308
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=96.55 E-value=0.0031 Score=50.35 Aligned_cols=79 Identities=16% Similarity=0.132 Sum_probs=54.5
Q ss_pred CcEEEEecCCCchhHHHHhhcCCc-cEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEech
Q psy1107 80 EGVLLEVGCGVGNFIFPLLSWSKI-CYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATLIF 158 (218)
Q Consensus 80 ~~~vLDiGcG~G~~~~~~~~~~~~-~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~~~ 158 (218)
..+++|+.||.|.++..+...+.. ..++++|+++.+++..+.+.. +..++..|+.+... ..++...+|+++...
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~----~~~~~~~Di~~~~~-~~~~~~~~D~l~~gp 76 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFP----HTQLLAKTIEGITL-EEFDRLSFDMILMSP 76 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT----TSCEECSCGGGCCH-HHHHHHCCSEEEECC
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcc----ccccccCCHHHccH-hHcCcCCcCEEEEcC
Confidence 468999999999999999877632 368999999999999998854 34466778766321 011112589999865
Q ss_pred hhcCC
Q psy1107 159 VLSAI 163 (218)
Q Consensus 159 ~l~~~ 163 (218)
....+
T Consensus 77 PCq~f 81 (343)
T 1g55_A 77 PCQPF 81 (343)
T ss_dssp C----
T ss_pred CCcch
Confidence 54433
No 309
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=96.44 E-value=0.033 Score=44.19 Aligned_cols=110 Identities=13% Similarity=0.106 Sum_probs=73.4
Q ss_pred CCcEEEEecCCCchhHHHHhhc-CCccEEEEEeCCHHHHHHHHhCCcc------------------------cCCCceEE
Q psy1107 79 GEGVLLEVGCGVGNFIFPLLSW-SKICYIHACDISPRAVNFFKLNPLY------------------------DASKMNVF 133 (218)
Q Consensus 79 ~~~~vLDiGcG~G~~~~~~~~~-~~~~~v~~~D~s~~~~~~~~~~~~~------------------------~~~~i~~~ 133 (218)
+..+|+-+|||.-.....+... .+...++=+|. |..++.=++.... ...+.+++
T Consensus 90 ~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~-P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v 168 (334)
T 3iei_A 90 CHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDF-PMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVI 168 (334)
T ss_dssp TCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEEC-HHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEE
T ss_pred CCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCc-HHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEE
Confidence 5679999999987776666543 23467888887 4444432221110 13578899
Q ss_pred eccCCCcccc------cCCCCCcccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEec
Q psy1107 134 PCDVTEDDIL------NQVPHNSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 134 ~~d~~~~~~~------~~~~~~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~ 190 (218)
.+|+.+.... ..+.....-++++..++.+++++....+++.+.... |+|.+++.+.
T Consensus 169 ~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f-~~~~~i~yE~ 230 (334)
T 3iei_A 169 GADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSF-ERAMFINYEQ 230 (334)
T ss_dssp ECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEE
T ss_pred ccccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhC-CCceEEEEec
Confidence 9999874321 124444556888889999999989999999888876 4555555553
No 310
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=96.34 E-value=0.0074 Score=47.82 Aligned_cols=74 Identities=19% Similarity=0.202 Sum_probs=53.1
Q ss_pred CcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEechh
Q psy1107 80 EGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATLIFV 159 (218)
Q Consensus 80 ~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~~~~ 159 (218)
..+++|+.||.|.++..+...+- -.+.++|+++.+++..+.+.... . +.|+.+... ..++ .+|+|+....
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG~-~~v~~~e~d~~a~~t~~~N~~~~---~---~~Di~~~~~-~~~~--~~D~l~~gpP 80 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCGA-ECVYSNEWDKYAQEVYEMNFGEK---P---EGDITQVNE-KTIP--DHDILCAGFP 80 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTC-EEEEEECCCHHHHHHHHHHHSCC---C---BSCGGGSCG-GGSC--CCSEEEEECC
T ss_pred CCcEEEECCCcCHHHHHHHHCCC-eEEEEEeCCHHHHHHHHHHcCCC---C---cCCHHHcCH-hhCC--CCCEEEECCC
Confidence 46999999999999999988764 36888999999999988874321 1 567665321 1122 5899998655
Q ss_pred hcCC
Q psy1107 160 LSAI 163 (218)
Q Consensus 160 l~~~ 163 (218)
...+
T Consensus 81 CQ~f 84 (327)
T 2c7p_A 81 CQAF 84 (327)
T ss_dssp CTTT
T ss_pred CCCc
Confidence 4444
No 311
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=96.32 E-value=0.014 Score=45.61 Aligned_cols=108 Identities=14% Similarity=0.108 Sum_probs=60.3
Q ss_pred CCCcEEEEecCCCchhHHHHh----hcCCcc--EEEEEeCCH------------HHHHHHHhCC-cccCC--CceEEecc
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLL----SWSKIC--YIHACDISP------------RAVNFFKLNP-LYDAS--KMNVFPCD 136 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~----~~~~~~--~v~~~D~s~------------~~~~~~~~~~-~~~~~--~i~~~~~d 136 (218)
.+..+|||+|.|+|....... +..|.. +++.+|-.+ .......... ...+. .+.+..+|
T Consensus 95 ~~~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GD 174 (308)
T 3vyw_A 95 RKVIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGD 174 (308)
T ss_dssp CSEEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESC
T ss_pred CCCcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEech
Confidence 455799999999998654322 224443 566666321 1111111111 11122 34456667
Q ss_pred CCCcccccCCCCCcccEEEechhhcCCCcchH-HHHHHHHHHhccCCeEEEE
Q psy1107 137 VTEDDILNQVPHNSVDIATLIFVLSAIHPNKF-STVVKNLFIMLKSGGIILF 187 (218)
Q Consensus 137 ~~~~~~~~~~~~~~~D~i~~~~~l~~~~~~~~-~~~l~~~~~~Lk~gG~li~ 187 (218)
+.+. ...++...+|+++.-..--.-.|+.+ ..++..++++++|||.|.-
T Consensus 175 a~~~--l~~l~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~laT 224 (308)
T 3vyw_A 175 ARKR--IKEVENFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWVS 224 (308)
T ss_dssp HHHH--GGGCCSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEEE
T ss_pred HHHH--HhhhcccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEEE
Confidence 6542 22344557999998432111112322 4788999999999998775
No 312
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=96.07 E-value=0.0037 Score=49.48 Aligned_cols=50 Identities=10% Similarity=-0.013 Sum_probs=42.7
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA 127 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~ 127 (218)
...++..|||.-||+|..+......+ ++.+|+|+++...+.++.+.....
T Consensus 249 ~~~~~~~VlDpF~GsGtt~~aa~~~g--r~~ig~e~~~~~~~~~~~r~~~~~ 298 (323)
T 1boo_A 249 LTEPDDLVVDIFGGSNTTGLVAERES--RKWISFEMKPEYVAASAFRFLDNN 298 (323)
T ss_dssp HCCTTCEEEETTCTTCHHHHHHHHTT--CEEEEEESCHHHHHHHHGGGSCSC
T ss_pred hCCCCCEEEECCCCCCHHHHHHHHcC--CCEEEEeCCHHHHHHHHHHHHhcc
Confidence 35678899999999999998888776 699999999999999998865433
No 313
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=95.82 E-value=0.013 Score=45.79 Aligned_cols=78 Identities=9% Similarity=-0.015 Sum_probs=54.6
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhcCCccE-EEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCC-CCcccE
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSWSKICY-IHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVP-HNSVDI 153 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~-v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~-~~~~D~ 153 (218)
......+++|+.||.|.++..+...+-... +.++|+++.+.+..+.+.. ...+...|+.+.... .++ .+.+|+
T Consensus 12 ~~~~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~----~~~~~~~DI~~i~~~-~i~~~~~~Dl 86 (295)
T 2qrv_A 12 EKRKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQ----GKIMYVGDVRSVTQK-HIQEWGPFDL 86 (295)
T ss_dssp CCCCCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTT----TCEEEECCGGGCCHH-HHHHTCCCSE
T ss_pred ccCCCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCC----CCceeCCChHHccHH-HhcccCCcCE
Confidence 345667999999999999988887764333 6999999999888776642 345667787764211 111 136899
Q ss_pred EEech
Q psy1107 154 ATLIF 158 (218)
Q Consensus 154 i~~~~ 158 (218)
++...
T Consensus 87 l~ggp 91 (295)
T 2qrv_A 87 VIGGS 91 (295)
T ss_dssp EEECC
T ss_pred EEecC
Confidence 98854
No 314
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=95.80 E-value=0.01 Score=48.51 Aligned_cols=49 Identities=6% Similarity=0.010 Sum_probs=40.8
Q ss_pred cCCCcEEEEecCCCchhHHHHh-hcCC-ccEEEEEeCCHHHHHHHHhCCcc
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLL-SWSK-ICYIHACDISPRAVNFFKLNPLY 125 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~-~~~~-~~~v~~~D~s~~~~~~~~~~~~~ 125 (218)
..++..++|+|++.|..+..++ ...+ ..+|+++|+++...+.++++...
T Consensus 224 l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~ 274 (409)
T 2py6_A 224 FSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRR 274 (409)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHH
T ss_pred cCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHh
Confidence 4678899999999999999887 4444 36999999999999999887543
No 315
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=95.79 E-value=0.013 Score=46.46 Aligned_cols=80 Identities=14% Similarity=-0.010 Sum_probs=55.3
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCc-cEE-EEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEE
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKI-CYI-HACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIAT 155 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~-~~v-~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~ 155 (218)
.+..+++|+.||.|.++.-+...+-. -.+ .++|+++.+.+..+.+... . ++..|+.+... ..++...+|+++
T Consensus 8 ~~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~---~--~~~~DI~~~~~-~~i~~~~~Dil~ 81 (327)
T 3qv2_A 8 QKQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKE---E--VQVKNLDSISI-KQIESLNCNTWF 81 (327)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCC---C--CBCCCTTTCCH-HHHHHTCCCEEE
T ss_pred CCCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCC---C--cccCChhhcCH-HHhccCCCCEEE
Confidence 34679999999999999988877632 256 7999999999988877432 1 45677766321 112223689999
Q ss_pred echhhcCC
Q psy1107 156 LIFVLSAI 163 (218)
Q Consensus 156 ~~~~l~~~ 163 (218)
.......+
T Consensus 82 ggpPCQ~f 89 (327)
T 3qv2_A 82 MSPPCQPY 89 (327)
T ss_dssp ECCCCTTC
T ss_pred ecCCccCc
Confidence 86554444
No 316
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.51 E-value=0.05 Score=37.17 Aligned_cols=99 Identities=14% Similarity=0.058 Sum_probs=60.4
Q ss_pred cEEEEecCCC-chhHH-HHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEech
Q psy1107 81 GVLLEVGCGV-GNFIF-PLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATLIF 158 (218)
Q Consensus 81 ~~vLDiGcG~-G~~~~-~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~~~ 158 (218)
.+|+=+|||. |.... .+...+ ..++++|.++..++.++.. .+.++.+|..+...+....-..+|++++.
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g--~~v~vid~~~~~~~~~~~~------g~~~i~gd~~~~~~l~~a~i~~ad~vi~~- 78 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASD--IPLVVIETSRTRVDELRER------GVRAVLGNAANEEIMQLAHLECAKWLILT- 78 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT--CCEEEEESCHHHHHHHHHT------TCEEEESCTTSHHHHHHTTGGGCSEEEEC-
T ss_pred CCEEEECcCHHHHHHHHHHHHCC--CCEEEEECCHHHHHHHHHc------CCCEEECCCCCHHHHHhcCcccCCEEEEE-
Confidence 5788888863 33322 222223 5899999999998887753 46678888877544332223468888753
Q ss_pred hhcCCCcchHHHHHHHHHHhccCCeEEEEEecCC
Q psy1107 159 VLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGL 192 (218)
Q Consensus 159 ~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~ 192 (218)
.+.+.....+-...+.+.|+..++......
T Consensus 79 ----~~~~~~n~~~~~~a~~~~~~~~iiar~~~~ 108 (140)
T 3fwz_A 79 ----IPNGYEAGEIVASARAKNPDIEIIARAHYD 108 (140)
T ss_dssp ----CSCHHHHHHHHHHHHHHCSSSEEEEEESSH
T ss_pred ----CCChHHHHHHHHHHHHHCCCCeEEEEECCH
Confidence 232222233344556677888877766443
No 317
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=95.43 E-value=0.023 Score=45.69 Aligned_cols=100 Identities=16% Similarity=0.099 Sum_probs=63.7
Q ss_pred hcCCCcEEEEecCCC-chhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccc---cCCCCCcc
Q psy1107 76 QDVGEGVLLEVGCGV-GNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDIL---NQVPHNSV 151 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~-G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~---~~~~~~~~ 151 (218)
...++.+||-+|+|. |..+.++++..-...|+++|.++..++.++..-. ..++ |..+.++. .....+.+
T Consensus 187 ~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~lGa-----~~vi--~~~~~~~~~~~~~~~~gg~ 259 (371)
T 1f8f_A 187 KVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGA-----THVI--NSKTQDPVAAIKEITDGGV 259 (371)
T ss_dssp CCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTC-----SEEE--ETTTSCHHHHHHHHTTSCE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCC-----CEEe--cCCccCHHHHHHHhcCCCC
Confidence 456788999999985 7788888765321279999999999998876411 1111 11111110 11112269
Q ss_pred cEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEec
Q psy1107 152 DIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 152 D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~ 190 (218)
|+|+.. .. ....+..+.+.|+++|.+++...
T Consensus 260 D~vid~-----~g---~~~~~~~~~~~l~~~G~iv~~G~ 290 (371)
T 1f8f_A 260 NFALES-----TG---SPEILKQGVDALGILGKIAVVGA 290 (371)
T ss_dssp EEEEEC-----SC---CHHHHHHHHHTEEEEEEEEECCC
T ss_pred cEEEEC-----CC---CHHHHHHHHHHHhcCCEEEEeCC
Confidence 999853 21 12467888999999999988653
No 318
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=95.35 E-value=0.092 Score=41.34 Aligned_cols=74 Identities=12% Similarity=0.026 Sum_probs=53.1
Q ss_pred cEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEechhh
Q psy1107 81 GVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATLIFVL 160 (218)
Q Consensus 81 ~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~~~~l 160 (218)
.+|||+-||.|.++.-+.+.+-. .+.++|+++.+.+..+.+.. ..++..|+.+... ..++ .+|+++.....
T Consensus 1 mkvidLFsG~GG~~~G~~~aG~~-~v~a~e~d~~a~~ty~~N~~-----~~~~~~DI~~i~~-~~~~--~~D~l~ggpPC 71 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAGFR-IICANEYDKSIWKTYESNHS-----AKLIKGDISKISS-DEFP--KCDGIIGGPPS 71 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCE-EEEEEECCTTTHHHHHHHCC-----SEEEESCGGGCCG-GGSC--CCSEEECCCCG
T ss_pred CeEEEeCcCccHHHHHHHHCCCE-EEEEEeCCHHHHHHHHHHCC-----CCcccCChhhCCH-hhCC--cccEEEecCCC
Confidence 37999999999999888777643 67799999999998887743 3566788876432 1232 58999885544
Q ss_pred cCC
Q psy1107 161 SAI 163 (218)
Q Consensus 161 ~~~ 163 (218)
..+
T Consensus 72 Q~f 74 (331)
T 3ubt_Y 72 QSW 74 (331)
T ss_dssp GGT
T ss_pred CCc
Confidence 433
No 319
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=95.19 E-value=0.1 Score=41.74 Aligned_cols=95 Identities=13% Similarity=0.124 Sum_probs=62.7
Q ss_pred CCcEEEEec-CC-CchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCc--ccccCCCCCcccEE
Q psy1107 79 GEGVLLEVG-CG-VGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTED--DILNQVPHNSVDIA 154 (218)
Q Consensus 79 ~~~~vLDiG-cG-~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~~~~~~D~i 154 (218)
++.+||=.| +| .|..+.++++....++|++++.++..++.+++.-. . .++ |..+. ........+.+|+|
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~lGa----d-~vi--~~~~~~~~~v~~~~~~g~Dvv 243 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGA----H-HVI--DHSKPLAAEVAALGLGAPAFV 243 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHTTC----S-EEE--CTTSCHHHHHHTTCSCCEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHcCC----C-EEE--eCCCCHHHHHHHhcCCCceEE
Confidence 677899998 54 68888888875224699999999999999876421 1 111 11111 00112233479988
Q ss_pred EechhhcCCCcchHHHHHHHHHHhccCCeEEEEE
Q psy1107 155 TLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFR 188 (218)
Q Consensus 155 ~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~ 188 (218)
+.. . .-...+..+.+.|+++|.+++.
T Consensus 244 id~-----~---g~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 244 FST-----T---HTDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp EEC-----S---CHHHHHHHHHHHSCTTCEEEEC
T ss_pred EEC-----C---CchhhHHHHHHHhcCCCEEEEE
Confidence 852 2 2235678888999999999886
No 320
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=95.08 E-value=0.055 Score=43.89 Aligned_cols=107 Identities=13% Similarity=0.102 Sum_probs=65.8
Q ss_pred hhcCCCcEEEEecCCC-chhHHHHhhcCCcc-EEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCccc-c----cCCC
Q psy1107 75 NQDVGEGVLLEVGCGV-GNFIFPLLSWSKIC-YIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDI-L----NQVP 147 (218)
Q Consensus 75 ~~~~~~~~vLDiGcG~-G~~~~~~~~~~~~~-~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-~----~~~~ 147 (218)
....++.+||-+|+|. |..+.++++.. .+ +|+++|.++..++.++.. +. ..+ |..+.+. . ....
T Consensus 181 ~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~l----Ga--~~i--~~~~~~~~~~~~~~~~~ 251 (398)
T 2dph_A 181 AGVKPGSHVYIAGAGPVGRCAAAGARLL-GAACVIVGDQNPERLKLLSDA----GF--ETI--DLRNSAPLRDQIDQILG 251 (398)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHH-TCSEEEEEESCHHHHHHHHTT----TC--EEE--ETTSSSCHHHHHHHHHS
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHc----CC--cEE--cCCCcchHHHHHHHHhC
Confidence 3456788999999975 88888888753 24 899999999999998754 11 222 2222111 0 0111
Q ss_pred CCcccEEEechhhcCCC------cchHHHHHHHHHHhccCCeEEEEEec
Q psy1107 148 HNSVDIATLIFVLSAIH------PNKFSTVVKNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 148 ~~~~D~i~~~~~l~~~~------~~~~~~~l~~~~~~Lk~gG~li~~~~ 190 (218)
...+|+|+....-.... .......+..+.+.|+++|.+++...
T Consensus 252 g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~ 300 (398)
T 2dph_A 252 KPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGI 300 (398)
T ss_dssp SSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSC
T ss_pred CCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEecc
Confidence 22699998643211000 00112467888899999999887543
No 321
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=95.02 E-value=0.044 Score=43.19 Aligned_cols=47 Identities=11% Similarity=-0.102 Sum_probs=40.5
Q ss_pred hcCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCH---HHHHHHHhCCc
Q psy1107 76 QDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISP---RAVNFFKLNPL 124 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~---~~~~~~~~~~~ 124 (218)
...++..|||.-||+|..+......+ .+.+|+|+++ ..++.+.++..
T Consensus 239 ~~~~~~~vlDpF~GsGtt~~aa~~~~--r~~ig~e~~~~~~~~~~~~~~Rl~ 288 (319)
T 1eg2_A 239 LSHPGSTVLDFFAGSGVTARVAIQEG--RNSICTDAAPVFKEYYQKQLTFLQ 288 (319)
T ss_dssp HSCTTCEEEETTCTTCHHHHHHHHHT--CEEEEEESSTHHHHHHHHHHHHC-
T ss_pred hCCCCCEEEecCCCCCHHHHHHHHcC--CcEEEEECCccHHHHHHHHHHHHH
Confidence 35678899999999999998888776 6999999999 99999988765
No 322
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=94.98 E-value=0.02 Score=45.41 Aligned_cols=79 Identities=16% Similarity=0.127 Sum_probs=54.2
Q ss_pred CcEEEEecCCCchhHHHHhhcCCc-cEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEech
Q psy1107 80 EGVLLEVGCGVGNFIFPLLSWSKI-CYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATLIF 158 (218)
Q Consensus 80 ~~~vLDiGcG~G~~~~~~~~~~~~-~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~~~ 158 (218)
..+++|+.||.|.++.-+...+.. -.+.++|+++.+.+..+.+.. ...++..|+.+... ..++...+|+++...
T Consensus 3 ~~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~----~~~~~~~DI~~~~~-~~~~~~~~D~l~ggp 77 (333)
T 4h0n_A 3 SHKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFP----ETNLLNRNIQQLTP-QVIKKWNVDTILMSP 77 (333)
T ss_dssp CEEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT----TSCEECCCGGGCCH-HHHHHTTCCEEEECC
T ss_pred CCEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCC----CCceeccccccCCH-HHhccCCCCEEEecC
Confidence 358999999999999888877642 257899999999998887753 33456677765321 112223589888754
Q ss_pred hhcCC
Q psy1107 159 VLSAI 163 (218)
Q Consensus 159 ~l~~~ 163 (218)
....+
T Consensus 78 PCQ~f 82 (333)
T 4h0n_A 78 PCQPF 82 (333)
T ss_dssp CCCCS
T ss_pred CCcch
Confidence 43333
No 323
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=94.71 E-value=0.071 Score=42.52 Aligned_cols=98 Identities=12% Similarity=0.099 Sum_probs=63.5
Q ss_pred hcCCCcEEEEecCCC-chhHHHHhhcCCcc-EEEEEeCCHHHHHHHHhCCcccCCCceEEeccCC---Ccc----cccCC
Q psy1107 76 QDVGEGVLLEVGCGV-GNFIFPLLSWSKIC-YIHACDISPRAVNFFKLNPLYDASKMNVFPCDVT---EDD----ILNQV 146 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~-G~~~~~~~~~~~~~-~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~---~~~----~~~~~ 146 (218)
...++.+||-+|+|. |..+.++++.. .+ +|+++|.++..++.++..-. . .++ |.. ..+ +....
T Consensus 168 ~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~lGa----~-~vi--~~~~~~~~~~~~~i~~~~ 239 (356)
T 1pl8_A 168 GVTLGHKVLVCGAGPIGMVTLLVAKAM-GAAQVVVTDLSATRLSKAKEIGA----D-LVL--QISKESPQEIARKVEGQL 239 (356)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTTC----S-EEE--ECSSCCHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHhCC----C-EEE--cCcccccchHHHHHHHHh
Confidence 456788999999874 77888887754 34 89999999999998876521 1 121 111 011 10111
Q ss_pred CCCcccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEec
Q psy1107 147 PHNSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 147 ~~~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~ 190 (218)
. ..+|+|+.. .. ....+..+.++|+++|.+++...
T Consensus 240 ~-~g~D~vid~-----~g---~~~~~~~~~~~l~~~G~iv~~G~ 274 (356)
T 1pl8_A 240 G-CKPEVTIEC-----TG---AEASIQAGIYATRSGGTLVLVGL 274 (356)
T ss_dssp T-SCCSEEEEC-----SC---CHHHHHHHHHHSCTTCEEEECSC
T ss_pred C-CCCCEEEEC-----CC---ChHHHHHHHHHhcCCCEEEEEec
Confidence 1 368999853 21 12456778899999999988654
No 324
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=94.68 E-value=0.044 Score=43.46 Aligned_cols=102 Identities=9% Similarity=0.028 Sum_probs=65.6
Q ss_pred hcCCCcEEEEecCCC-chhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEecc--CCCcccccCCCCCccc
Q psy1107 76 QDVGEGVLLEVGCGV-GNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCD--VTEDDILNQVPHNSVD 152 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~-G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d--~~~~~~~~~~~~~~~D 152 (218)
...++.+||-+|+|. |..+.++++.....+|+++|.++..++.+++.-. ..++..+ ..+ .+........+|
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~lGa-----~~~i~~~~~~~~-~v~~~t~g~g~d 241 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREVGA-----DAAVKSGAGAAD-AIRELTGGQGAT 241 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHTTC-----SEEEECSTTHHH-HHHHHHGGGCEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCC-----CEEEcCCCcHHH-HHHHHhCCCCCe
Confidence 456788999999874 7788888765423699999999999999987521 1111111 000 000011122689
Q ss_pred EEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 153 IATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 153 ~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
+|+-. .. -...+..+.+.|+++|.+++....
T Consensus 242 ~v~d~-----~G---~~~~~~~~~~~l~~~G~iv~~G~~ 272 (345)
T 3jv7_A 242 AVFDF-----VG---AQSTIDTAQQVVAVDGHISVVGIH 272 (345)
T ss_dssp EEEES-----SC---CHHHHHHHHHHEEEEEEEEECSCC
T ss_pred EEEEC-----CC---CHHHHHHHHHHHhcCCEEEEECCC
Confidence 88842 21 124678889999999999986543
No 325
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=94.56 E-value=0.091 Score=42.17 Aligned_cols=101 Identities=14% Similarity=0.137 Sum_probs=64.8
Q ss_pred hhcCCCcEEEEecCCC-chhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccc---cC---CC
Q psy1107 75 NQDVGEGVLLEVGCGV-GNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDIL---NQ---VP 147 (218)
Q Consensus 75 ~~~~~~~~vLDiGcG~-G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~---~~---~~ 147 (218)
....++.+||-.|+|. |..+.++++..-..+|+++|.++...+.++..-. . .. .|....++. .. ..
T Consensus 178 ~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa----~-~v--i~~~~~~~~~~i~~~~~~~ 250 (370)
T 4ej6_A 178 SGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEVGA----T-AT--VDPSAGDVVEAIAGPVGLV 250 (370)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTC----S-EE--ECTTSSCHHHHHHSTTSSS
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCC----C-EE--ECCCCcCHHHHHHhhhhcc
Confidence 3456788999999874 7778888775422289999999999998876411 1 11 122221110 11 22
Q ss_pred CCcccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEec
Q psy1107 148 HNSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 148 ~~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~ 190 (218)
.+.+|+|+.. .. ....+..+.+.|+++|.+++...
T Consensus 251 ~gg~Dvvid~-----~G---~~~~~~~~~~~l~~~G~vv~~G~ 285 (370)
T 4ej6_A 251 PGGVDVVIEC-----AG---VAETVKQSTRLAKAGGTVVILGV 285 (370)
T ss_dssp TTCEEEEEEC-----SC---CHHHHHHHHHHEEEEEEEEECSC
T ss_pred CCCCCEEEEC-----CC---CHHHHHHHHHHhccCCEEEEEec
Confidence 3479999852 21 12467888899999999988653
No 326
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=94.54 E-value=0.13 Score=41.67 Aligned_cols=46 Identities=20% Similarity=0.158 Sum_probs=34.1
Q ss_pred CCCcEEEEecCCCchhHHHHhhc-------CCccEEEEEeCCHHHHHHHHhCC
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSW-------SKICYIHACDISPRAVNFFKLNP 123 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~-------~~~~~v~~~D~s~~~~~~~~~~~ 123 (218)
+.+..|+|+|.|+|.++..++.. ....+|..+|+|+...+.-++..
T Consensus 79 p~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L 131 (387)
T 1zkd_A 79 PQTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLL 131 (387)
T ss_dssp CSSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHS
T ss_pred CCCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHh
Confidence 34568999999999998777643 12358999999998776555443
No 327
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=94.43 E-value=0.089 Score=41.60 Aligned_cols=100 Identities=12% Similarity=0.083 Sum_probs=64.7
Q ss_pred hcCCCcEEEEecCC-CchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCC--CCCccc
Q psy1107 76 QDVGEGVLLEVGCG-VGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQV--PHNSVD 152 (218)
Q Consensus 76 ~~~~~~~vLDiGcG-~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~--~~~~~D 152 (218)
...++.+||-.|+| .|..+.++++.. .++|+++|.++..++.+++.-. . ..+ |..+.+....+ ..+.+|
T Consensus 163 ~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa----~-~~i--~~~~~~~~~~~~~~~g~~d 234 (340)
T 3s2e_A 163 DTRPGQWVVISGIGGLGHVAVQYARAM-GLRVAAVDIDDAKLNLARRLGA----E-VAV--NARDTDPAAWLQKEIGGAH 234 (340)
T ss_dssp TCCTTSEEEEECCSTTHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTTC----S-EEE--ETTTSCHHHHHHHHHSSEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHcCC----C-EEE--eCCCcCHHHHHHHhCCCCC
Confidence 45678899999997 488888888764 3599999999999999887521 1 111 22221111000 112688
Q ss_pred EEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 153 IATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 153 ~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
+|+... .....+..+.+.|+++|.+++....
T Consensus 235 ~vid~~--------g~~~~~~~~~~~l~~~G~iv~~G~~ 265 (340)
T 3s2e_A 235 GVLVTA--------VSPKAFSQAIGMVRRGGTIALNGLP 265 (340)
T ss_dssp EEEESS--------CCHHHHHHHHHHEEEEEEEEECSCC
T ss_pred EEEEeC--------CCHHHHHHHHHHhccCCEEEEeCCC
Confidence 887531 1134678888999999999886543
No 328
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.41 E-value=0.14 Score=44.78 Aligned_cols=108 Identities=18% Similarity=0.267 Sum_probs=70.3
Q ss_pred CCcEEEEecCCCchhHHHHhhcCC--------ccEEEEEeCCHHHHHHHHhCCcc-------------------------
Q psy1107 79 GEGVLLEVGCGVGNFIFPLLSWSK--------ICYIHACDISPRAVNFFKLNPLY------------------------- 125 (218)
Q Consensus 79 ~~~~vLDiGcG~G~~~~~~~~~~~--------~~~v~~~D~s~~~~~~~~~~~~~------------------------- 125 (218)
+..+|+-+|||.-.....+....+ ...++=+|.. ..++.-++.+..
T Consensus 107 ~~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~~~EvD~p-~v~~~K~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~ 185 (695)
T 2zwa_A 107 KKIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVSFIDIDYS-DLLKIKIELIKTIPELSKIIGLSEDKDYVDDSNVDFL 185 (695)
T ss_dssp SEEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEEEEEEECH-HHHHHHHHHHHHCHHHHHHTTCCSSCSSCSCTTCCCE
T ss_pred CCcEEEEcccccCcceeeeeccCcccccccCCCCEEEECccH-HHHHHHHHHHHcChHHHHhhccccccccccccccccc
Confidence 568999999998777777755433 4566777763 333222221110
Q ss_pred cCCCceEEeccCCCcccc------cCC-CCCcccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 126 DASKMNVFPCDVTEDDIL------NQV-PHNSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 126 ~~~~i~~~~~d~~~~~~~------~~~-~~~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
...+.+++.+|+.+.... ..+ ....--++++..++.+++++....+++.+.+. ++|.+++.+
T Consensus 186 ~s~~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl~~~~~~~ll~~~~~~--~~~~~~~~e 254 (695)
T 2zwa_A 186 TTPKYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYMKPERSDSIIEATSKM--ENSHFIILE 254 (695)
T ss_dssp ECSSEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGSCHHHHHHHHHHHHTS--SSEEEEEEE
T ss_pred cCCCeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEcCHHHHHHHHHHHhhC--CCceEEEEE
Confidence 013678889999874221 122 33344578888899999999999999988864 677777655
No 329
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=94.36 E-value=0.42 Score=32.26 Aligned_cols=98 Identities=10% Similarity=0.067 Sum_probs=57.4
Q ss_pred CcEEEEecCCCchhHHHHhhcC--CccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEec
Q psy1107 80 EGVLLEVGCGVGNFIFPLLSWS--KICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATLI 157 (218)
Q Consensus 80 ~~~vLDiGcG~G~~~~~~~~~~--~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~~ 157 (218)
..+|+=+|+|. .+..++... ...+|+++|.++..++.+... ...++.+|..+........-..+|+|++.
T Consensus 6 ~~~v~I~G~G~--iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~------~~~~~~gd~~~~~~l~~~~~~~~d~vi~~ 77 (141)
T 3llv_A 6 RYEYIVIGSEA--AGVGLVRELTAAGKKVLAVDKSKEKIELLEDE------GFDAVIADPTDESFYRSLDLEGVSAVLIT 77 (141)
T ss_dssp CCSEEEECCSH--HHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT------TCEEEECCTTCHHHHHHSCCTTCSEEEEC
T ss_pred CCEEEEECCCH--HHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC------CCcEEECCCCCHHHHHhCCcccCCEEEEe
Confidence 35788888863 444443321 135899999999988877653 35677888887544332333468888763
Q ss_pred hhhcCCCcchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 158 FVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 158 ~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
. +.......+-...+.+. .+.++.....
T Consensus 78 ~-----~~~~~n~~~~~~a~~~~-~~~iia~~~~ 105 (141)
T 3llv_A 78 G-----SDDEFNLKILKALRSVS-DVYAIVRVSS 105 (141)
T ss_dssp C-----SCHHHHHHHHHHHHHHC-CCCEEEEESC
T ss_pred c-----CCHHHHHHHHHHHHHhC-CceEEEEEcC
Confidence 2 22233333344444455 5666665543
No 330
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=94.32 E-value=0.18 Score=41.21 Aligned_cols=103 Identities=16% Similarity=0.085 Sum_probs=65.7
Q ss_pred CcEEEEecCCCchhHHHHhhc--CCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEec
Q psy1107 80 EGVLLEVGCGVGNFIFPLLSW--SKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATLI 157 (218)
Q Consensus 80 ~~~vLDiGcG~G~~~~~~~~~--~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~~ 157 (218)
..+|+=+|+|. ++..+++. ..+..|+++|.++..++.++.. .+.++.+|.++.+.+....-...|+|++.
T Consensus 4 ~~~viIiG~Gr--~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~------g~~vi~GDat~~~~L~~agi~~A~~viv~ 75 (413)
T 3l9w_A 4 GMRVIIAGFGR--FGQITGRLLLSSGVKMVVLDHDPDHIETLRKF------GMKVFYGDATRMDLLESAGAAKAEVLINA 75 (413)
T ss_dssp CCSEEEECCSH--HHHHHHHHHHHTTCCEEEEECCHHHHHHHHHT------TCCCEESCTTCHHHHHHTTTTTCSEEEEC
T ss_pred CCeEEEECCCH--HHHHHHHHHHHCCCCEEEEECCHHHHHHHHhC------CCeEEEcCCCCHHHHHhcCCCccCEEEEC
Confidence 35678888763 33333322 1235899999999999988753 35678899988765444434468888763
Q ss_pred hhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCCCch
Q psy1107 158 FVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLHDM 195 (218)
Q Consensus 158 ~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~~~~ 195 (218)
++.+.....+-...+.+.|+..+++........
T Consensus 76 -----~~~~~~n~~i~~~ar~~~p~~~Iiara~~~~~~ 108 (413)
T 3l9w_A 76 -----IDDPQTNLQLTEMVKEHFPHLQIIARARDVDHY 108 (413)
T ss_dssp -----CSSHHHHHHHHHHHHHHCTTCEEEEEESSHHHH
T ss_pred -----CCChHHHHHHHHHHHHhCCCCeEEEEECCHHHH
Confidence 232334445555667778988888876544433
No 331
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=94.07 E-value=0.039 Score=44.70 Aligned_cols=107 Identities=17% Similarity=0.125 Sum_probs=65.5
Q ss_pred hhcCCCcEEEEecCCC-chhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcc-----cccCCCC
Q psy1107 75 NQDVGEGVLLEVGCGV-GNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDD-----ILNQVPH 148 (218)
Q Consensus 75 ~~~~~~~~vLDiGcG~-G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-----~~~~~~~ 148 (218)
....++.+||-+|+|. |..+.++++..-...|+++|.++..++.++..- . .. .|..+.+ +......
T Consensus 181 ~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~lG----a--~~--i~~~~~~~~~~~v~~~t~g 252 (398)
T 1kol_A 181 AGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQG----F--EI--ADLSLDTPLHEQIAALLGE 252 (398)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTT----C--EE--EETTSSSCHHHHHHHHHSS
T ss_pred cCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHcC----C--cE--EccCCcchHHHHHHHHhCC
Confidence 3456788999999874 788888887642227999999999999997651 1 11 1222111 1001122
Q ss_pred CcccEEEechhhcCC-------CcchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 149 NSVDIATLIFVLSAI-------HPNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 149 ~~~D~i~~~~~l~~~-------~~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
..+|+|+........ ...+....+..+.++|+++|.+++..
T Consensus 253 ~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G 300 (398)
T 1kol_A 253 PEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPG 300 (398)
T ss_dssp SCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECS
T ss_pred CCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEec
Confidence 368999864321100 00112346788899999999998755
No 332
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=94.07 E-value=0.096 Score=45.69 Aligned_cols=108 Identities=17% Similarity=0.079 Sum_probs=62.6
Q ss_pred CCCcEEEEecCCCchhHHHHhhc-------CC-----ccEEEEEeC---CHHHHHHHHhCCc-----------cc-----
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSW-------SK-----ICYIHACDI---SPRAVNFFKLNPL-----------YD----- 126 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~-------~~-----~~~v~~~D~---s~~~~~~~~~~~~-----------~~----- 126 (218)
.+..+|+|+|.|+|.....+.+. +| ..+++.++. +...+..+..... ..
T Consensus 57 ~~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~ 136 (689)
T 3pvc_A 57 QQSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLA 136 (689)
T ss_dssp SSEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCS
T ss_pred CCceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCC
Confidence 45679999999999877666443 12 257999998 4455544332211 00
Q ss_pred --------C--CCceEEeccCCCcccccCCC---CCcccEEEechhhcCCCcch-HHHHHHHHHHhccCCeEEEE
Q psy1107 127 --------A--SKMNVFPCDVTEDDILNQVP---HNSVDIATLIFVLSAIHPNK-FSTVVKNLFIMLKSGGIILF 187 (218)
Q Consensus 127 --------~--~~i~~~~~d~~~~~~~~~~~---~~~~D~i~~~~~l~~~~~~~-~~~~l~~~~~~Lk~gG~li~ 187 (218)
. ..+.+..+|+.+. ...+. ...+|.+++...--.-.|+. ...++..+.++++|||.+..
T Consensus 137 ~~~r~~~~~~~~~l~l~~gd~~~~--l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t 209 (689)
T 3pvc_A 137 GCHRILLADGAITLDLWFGDVNTL--LPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFST 209 (689)
T ss_dssp EEEEEEETTTTEEEEEEESCHHHH--GGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEE
T ss_pred CceEEEecCCcEEEEEEccCHHHH--HhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEe
Confidence 0 1344555565442 12222 35799998743211111222 25788999999999997664
No 333
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=94.01 E-value=0.038 Score=44.01 Aligned_cols=101 Identities=15% Similarity=0.057 Sum_probs=64.6
Q ss_pred hhcCCCcEEEEecCCC-chhHHHHhhcCCcc-EEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCccc----ccCCCC
Q psy1107 75 NQDVGEGVLLEVGCGV-GNFIFPLLSWSKIC-YIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDI----LNQVPH 148 (218)
Q Consensus 75 ~~~~~~~~vLDiGcG~-G~~~~~~~~~~~~~-~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~----~~~~~~ 148 (218)
....++.+||-+|+|. |..+.++++.. .+ +|+++|.++..++.+++.-. ..++ |..+.++ ......
T Consensus 162 ~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~~Vi~~~~~~~~~~~~~~lGa-----~~vi--~~~~~~~~~~v~~~t~g 233 (352)
T 3fpc_A 162 ANIKLGDTVCVIGIGPVGLMSVAGANHL-GAGRIFAVGSRKHCCDIALEYGA-----TDII--NYKNGDIVEQILKATDG 233 (352)
T ss_dssp TTCCTTCCEEEECCSHHHHHHHHHHHTT-TCSSEEEECCCHHHHHHHHHHTC-----CEEE--CGGGSCHHHHHHHHTTT
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHHHhCC-----ceEE--cCCCcCHHHHHHHHcCC
Confidence 3456788999999874 77788887764 34 79999999998888876521 1111 1111111 111223
Q ss_pred CcccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 149 NSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 149 ~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
..+|+|+.. .. -...+..+.+.|+++|.+++....
T Consensus 234 ~g~D~v~d~-----~g---~~~~~~~~~~~l~~~G~~v~~G~~ 268 (352)
T 3fpc_A 234 KGVDKVVIA-----GG---DVHTFAQAVKMIKPGSDIGNVNYL 268 (352)
T ss_dssp CCEEEEEEC-----SS---CTTHHHHHHHHEEEEEEEEECCCC
T ss_pred CCCCEEEEC-----CC---ChHHHHHHHHHHhcCCEEEEeccc
Confidence 369999852 21 113677788999999999986543
No 334
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=94.01 E-value=0.11 Score=45.28 Aligned_cols=108 Identities=15% Similarity=0.090 Sum_probs=62.1
Q ss_pred CCCcEEEEecCCCchhHHHHhhc-------CC-----ccEEEEEeC---CHHHHHHHHhCCcc-----------cC----
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSW-------SK-----ICYIHACDI---SPRAVNFFKLNPLY-----------DA---- 127 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~-------~~-----~~~v~~~D~---s~~~~~~~~~~~~~-----------~~---- 127 (218)
.+..+|+|+|.|+|......... +| ..++++++. +...+..+...... .+
T Consensus 65 ~~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~ 144 (676)
T 3ps9_A 65 HPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLP 144 (676)
T ss_dssp SSEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCS
T ss_pred CCceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCC
Confidence 34579999999999776555432 11 247999998 77776644432110 11
Q ss_pred -----------CCceEEeccCCCcccccCCC---CCcccEEEechhhcCCCcch-HHHHHHHHHHhccCCeEEEE
Q psy1107 128 -----------SKMNVFPCDVTEDDILNQVP---HNSVDIATLIFVLSAIHPNK-FSTVVKNLFIMLKSGGIILF 187 (218)
Q Consensus 128 -----------~~i~~~~~d~~~~~~~~~~~---~~~~D~i~~~~~l~~~~~~~-~~~~l~~~~~~Lk~gG~li~ 187 (218)
..+.+..+|+.+. ...+. ...+|++++-..-....|+. -..++..+.++++|||.+..
T Consensus 145 ~~~~~~~~~~~~~l~l~~gd~~~~--l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t 217 (676)
T 3ps9_A 145 GCHRLLLDAGRVTLDLWFGDINEL--TSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 217 (676)
T ss_dssp EEEEEEEGGGTEEEEEEESCHHHH--GGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEE
T ss_pred CceEEEecCCcEEEEEecCCHHHH--HHhcccccCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEe
Confidence 1122333444331 11121 35799998743211111222 24788999999999997765
No 335
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=93.82 E-value=0.38 Score=40.11 Aligned_cols=84 Identities=15% Similarity=0.139 Sum_probs=56.0
Q ss_pred CCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCccccc--CC----------
Q psy1107 79 GEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILN--QV---------- 146 (218)
Q Consensus 79 ~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~--~~---------- 146 (218)
...+++|+.||.|.++.-+...+- -.+.++|+++.+.+.-+.+.... ....++..|+.+..... .+
T Consensus 87 ~~~~viDLFaG~GGlslG~~~aG~-~~v~avE~d~~A~~ty~~N~~~~-p~~~~~~~DI~~i~~~~~~~~~~~~~~~~i~ 164 (482)
T 3me5_A 87 YAFRFIDLFAGIGGIRRGFESIGG-QCVFTSEWNKHAVRTYKANHYCD-PATHHFNEDIRDITLSHQEGVSDEAAAEHIR 164 (482)
T ss_dssp CSEEEEEESCTTSHHHHHHHTTTE-EEEEEECCCHHHHHHHHHHSCCC-TTTCEEESCTHHHHCTTCTTSCHHHHHHHHH
T ss_pred ccceEEEecCCccHHHHHHHHCCC-EEEEEEeCCHHHHHHHHHhcccC-CCcceeccchhhhhhccccccchhhHHhhhh
Confidence 357999999999999988877663 25889999999988888775322 24456667776532100 00
Q ss_pred -CCCcccEEEechhhcCCC
Q psy1107 147 -PHNSVDIATLIFVLSAIH 164 (218)
Q Consensus 147 -~~~~~D~i~~~~~l~~~~ 164 (218)
....+|+++.......++
T Consensus 165 ~~~~~~Dvl~gGpPCQ~FS 183 (482)
T 3me5_A 165 QHIPEHDVLLAGFPCQPFS 183 (482)
T ss_dssp HHSCCCSEEEEECCCCCC-
T ss_pred hcCCCCCEEEecCCCcchh
Confidence 013589998866555444
No 336
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=93.77 E-value=0.1 Score=41.45 Aligned_cols=94 Identities=12% Similarity=0.036 Sum_probs=63.2
Q ss_pred hcCCCcEEEEecCCC-chhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEE
Q psy1107 76 QDVGEGVLLEVGCGV-GNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIA 154 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~-G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i 154 (218)
...++.+||-+|+|. |..+.++++.. .++|++++.++...+.+++.- .. .++ .+. ..+.. .+|+|
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lG----a~-~v~-~~~------~~~~~-~~D~v 238 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVAM-GAEVSVFARNEHKKQDALSMG----VK-HFY-TDP------KQCKE-ELDFI 238 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHHT-TCEEEEECSSSTTHHHHHHTT----CS-EEE-SSG------GGCCS-CEEEE
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHhcC----CC-eec-CCH------HHHhc-CCCEE
Confidence 456788999999874 77788887764 359999999999999888641 11 122 221 11222 79999
Q ss_pred EechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 155 TLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 155 ~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
+.. .... ..+..+.+.|+++|.+++....
T Consensus 239 id~-----~g~~---~~~~~~~~~l~~~G~iv~~G~~ 267 (348)
T 3two_A 239 IST-----IPTH---YDLKDYLKLLTYNGDLALVGLP 267 (348)
T ss_dssp EEC-----CCSC---CCHHHHHTTEEEEEEEEECCCC
T ss_pred EEC-----CCcH---HHHHHHHHHHhcCCEEEEECCC
Confidence 853 2111 2456778899999999987544
No 337
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=93.66 E-value=0.18 Score=40.20 Aligned_cols=104 Identities=13% Similarity=0.081 Sum_probs=65.4
Q ss_pred hhcCCCcEEEEecCCC-chhHHHHhhcCCccE-EEEEeCCHHHHHHHHhCCcccCCCceEEeccCC-Cccc----ccCCC
Q psy1107 75 NQDVGEGVLLEVGCGV-GNFIFPLLSWSKICY-IHACDISPRAVNFFKLNPLYDASKMNVFPCDVT-EDDI----LNQVP 147 (218)
Q Consensus 75 ~~~~~~~~vLDiGcG~-G~~~~~~~~~~~~~~-v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~-~~~~----~~~~~ 147 (218)
....++.+||=+|+|. |..+.++++.. .++ |+++|.++..++.+++. . ..+.....+.. ..++ .....
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~l-~---~~~~~~~~~~~~~~~~~~~v~~~t~ 249 (363)
T 3m6i_A 175 AGVRLGDPVLICGAGPIGLITMLCAKAA-GACPLVITDIDEGRLKFAKEI-C---PEVVTHKVERLSAEESAKKIVESFG 249 (363)
T ss_dssp HTCCTTCCEEEECCSHHHHHHHHHHHHT-TCCSEEEEESCHHHHHHHHHH-C---TTCEEEECCSCCHHHHHHHHHHHTS
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHh-c---hhcccccccccchHHHHHHHHHHhC
Confidence 3456778899899873 77888887764 244 99999999999999875 2 12211121111 1111 11122
Q ss_pred CCcccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 148 HNSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 148 ~~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
...+|+|+.. .. -...+..+.+.|+++|.+++....
T Consensus 250 g~g~Dvvid~-----~g---~~~~~~~~~~~l~~~G~iv~~G~~ 285 (363)
T 3m6i_A 250 GIEPAVALEC-----TG---VESSIAAAIWAVKFGGKVFVIGVG 285 (363)
T ss_dssp SCCCSEEEEC-----SC---CHHHHHHHHHHSCTTCEEEECCCC
T ss_pred CCCCCEEEEC-----CC---ChHHHHHHHHHhcCCCEEEEEccC
Confidence 3478999852 21 124677888999999999986543
No 338
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=93.62 E-value=0.22 Score=39.56 Aligned_cols=99 Identities=11% Similarity=0.088 Sum_probs=62.9
Q ss_pred hcCCCcEEEEecCCC-chhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCC-ccc----ccCCC--
Q psy1107 76 QDVGEGVLLEVGCGV-GNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTE-DDI----LNQVP-- 147 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~-G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~-~~~----~~~~~-- 147 (218)
...++.+||-+|+|. |..+.++++.. .++|+++|.++..++.++..-. . ..+ |..+ .+. .....
T Consensus 165 ~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa----~-~~~--~~~~~~~~~~~i~~~~~~~ 236 (352)
T 1e3j_A 165 GVQLGTTVLVIGAGPIGLVSVLAAKAY-GAFVVCTARSPRRLEVAKNCGA----D-VTL--VVDPAKEEESSIIERIRSA 236 (352)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHTTC----S-EEE--ECCTTTSCHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHhCC----C-EEE--cCcccccHHHHHHHHhccc
Confidence 456788999999873 77777777653 3579999999999998876421 1 111 2111 111 00111
Q ss_pred -CCcccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEec
Q psy1107 148 -HNSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 148 -~~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~ 190 (218)
...+|+|+.. .. ....+..+.+.|+++|.+++...
T Consensus 237 ~g~g~D~vid~-----~g---~~~~~~~~~~~l~~~G~iv~~G~ 272 (352)
T 1e3j_A 237 IGDLPNVTIDC-----SG---NEKCITIGINITRTGGTLMLVGM 272 (352)
T ss_dssp SSSCCSEEEEC-----SC---CHHHHHHHHHHSCTTCEEEECSC
T ss_pred cCCCCCEEEEC-----CC---CHHHHHHHHHHHhcCCEEEEEec
Confidence 2368999853 21 12356778899999999988653
No 339
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=93.29 E-value=0.26 Score=37.69 Aligned_cols=109 Identities=18% Similarity=0.202 Sum_probs=62.9
Q ss_pred CCcEEEEecCCCc---hhHHHHhhcCCccEEEEEeCC------------HHHHHHHHhCCcccCCCceEEeccCCCcccc
Q psy1107 79 GEGVLLEVGCGVG---NFIFPLLSWSKICYIHACDIS------------PRAVNFFKLNPLYDASKMNVFPCDVTEDDIL 143 (218)
Q Consensus 79 ~~~~vLDiGcG~G---~~~~~~~~~~~~~~v~~~D~s------------~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 143 (218)
.++++|=.|++.| ..+..+++.+ .+|+.+|.+ ...++.+.......+.++.++.+|+.+..-.
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G--~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v 86 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEG--ADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAV 86 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCC--CeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHH
Confidence 4567887777655 2344444444 589999876 5554444433333346788999999875321
Q ss_pred cC-CC-----CCcccEEEechhhcC----CCcchHH-----------HHHHHHHHhccCCeEEEEEe
Q psy1107 144 NQ-VP-----HNSVDIATLIFVLSA----IHPNKFS-----------TVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 144 ~~-~~-----~~~~D~i~~~~~l~~----~~~~~~~-----------~~l~~~~~~Lk~gG~li~~~ 189 (218)
.. +. -+..|+++.+..+.. .+.+++. .+++.+...++.+|.++...
T Consensus 87 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 153 (287)
T 3pxx_A 87 SRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTG 153 (287)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred HHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEec
Confidence 11 00 136899888654332 2233333 23345566667788777654
No 340
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=93.27 E-value=0.38 Score=36.35 Aligned_cols=109 Identities=16% Similarity=0.136 Sum_probs=63.0
Q ss_pred CCcEEEEecCC--Cc---hhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC-CCceEEeccCCCcccccC-CC----
Q psy1107 79 GEGVLLEVGCG--VG---NFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA-SKMNVFPCDVTEDDILNQ-VP---- 147 (218)
Q Consensus 79 ~~~~vLDiGcG--~G---~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~-~~---- 147 (218)
.++++|=.|++ +| ..+..+++.+ .+|+.++-+....+.+.+.....+ .++.++.+|+.+.+-... +.
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 83 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAG--ARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKE 83 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTT--CEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCC--CEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHH
Confidence 45688888876 33 2344555555 588888877654444443322223 378999999988642111 00
Q ss_pred -CCcccEEEechhhcC----------CCcchHH-----------HHHHHHHHhccCCeEEEEEe
Q psy1107 148 -HNSVDIATLIFVLSA----------IHPNKFS-----------TVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 148 -~~~~D~i~~~~~l~~----------~~~~~~~-----------~~l~~~~~~Lk~gG~li~~~ 189 (218)
-+.+|+++....+.. .+.+.+. .+++.+...++++|.++...
T Consensus 84 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 147 (266)
T 3oig_A 84 QVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLT 147 (266)
T ss_dssp HHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred HhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEe
Confidence 136788887653322 2222322 24455667777888887755
No 341
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=93.17 E-value=0.19 Score=40.26 Aligned_cols=98 Identities=16% Similarity=0.074 Sum_probs=61.9
Q ss_pred hcCCCcEEEEecCCC-chhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEE
Q psy1107 76 QDVGEGVLLEVGCGV-GNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIA 154 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~-G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i 154 (218)
...++.+||-+|+|. |..+.++++.. .++|++++.++..++.+++. +.. .++ |..+.+...... ..+|+|
T Consensus 191 ~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~Vi~~~~~~~~~~~a~~l----Ga~-~vi--~~~~~~~~~~~~-~g~Dvv 261 (369)
T 1uuf_A 191 QAGPGKKVGVVGIGGLGHMGIKLAHAM-GAHVVAFTTSEAKREAAKAL----GAD-EVV--NSRNADEMAAHL-KSFDFI 261 (369)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHH----TCS-EEE--ETTCHHHHHTTT-TCEEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc----CCc-EEe--ccccHHHHHHhh-cCCCEE
Confidence 456788999999974 77777877653 35899999999998888763 111 111 221211111222 479999
Q ss_pred EechhhcCCCcchHHHHHHHHHHhccCCeEEEEEec
Q psy1107 155 TLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 155 ~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~ 190 (218)
+..... ...+..+.+.|+++|.++....
T Consensus 262 id~~g~--------~~~~~~~~~~l~~~G~iv~~G~ 289 (369)
T 1uuf_A 262 LNTVAA--------PHNLDDFTTLLKRDGTMTLVGA 289 (369)
T ss_dssp EECCSS--------CCCHHHHHTTEEEEEEEEECCC
T ss_pred EECCCC--------HHHHHHHHHHhccCCEEEEecc
Confidence 853211 1135667789999999887543
No 342
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=93.14 E-value=0.31 Score=39.04 Aligned_cols=99 Identities=13% Similarity=0.069 Sum_probs=62.6
Q ss_pred hcCCCcEEEEecCCC-chhHHHHhhcCCcc-EEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCC--ccc---ccCCCC
Q psy1107 76 QDVGEGVLLEVGCGV-GNFIFPLLSWSKIC-YIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTE--DDI---LNQVPH 148 (218)
Q Consensus 76 ~~~~~~~vLDiGcG~-G~~~~~~~~~~~~~-~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~--~~~---~~~~~~ 148 (218)
...++.+||-+|+|. |..+.++++.. .+ +|+++|.++..++.++..-. ..++ |..+ .++ ......
T Consensus 188 ~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~~Vi~~~~~~~~~~~~~~lGa-----~~vi--~~~~~~~~~~~~~~~~~~ 259 (374)
T 2jhf_A 188 KVTQGSTCAVFGLGGVGLSVIMGCKAA-GAARIIGVDINKDKFAKAKEVGA-----TECV--NPQDYKKPIQEVLTEMSN 259 (374)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHHHTTC-----SEEE--CGGGCSSCHHHHHHHHTT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHhCC-----ceEe--cccccchhHHHHHHHHhC
Confidence 345778999999873 77777777654 34 79999999999998876411 1111 2211 111 011112
Q ss_pred CcccEEEechhhcCCCcchHHHHHHHHHHhccCC-eEEEEEec
Q psy1107 149 NSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSG-GIILFRDY 190 (218)
Q Consensus 149 ~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~g-G~li~~~~ 190 (218)
+.+|+|+.. .. ....+..+.+.|+++ |.+++...
T Consensus 260 ~g~D~vid~-----~g---~~~~~~~~~~~l~~~~G~iv~~G~ 294 (374)
T 2jhf_A 260 GGVDFSFEV-----IG---RLDTMVTALSCCQEAYGVSVIVGV 294 (374)
T ss_dssp SCBSEEEEC-----SC---CHHHHHHHHHHBCTTTCEEEECSC
T ss_pred CCCcEEEEC-----CC---CHHHHHHHHHHhhcCCcEEEEecc
Confidence 368999853 21 124677888999999 99887653
No 343
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=93.04 E-value=0.27 Score=39.34 Aligned_cols=100 Identities=12% Similarity=0.003 Sum_probs=62.9
Q ss_pred hcCCCcEEEEecCC-CchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCC--cccc---cCCCCC
Q psy1107 76 QDVGEGVLLEVGCG-VGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTE--DDIL---NQVPHN 149 (218)
Q Consensus 76 ~~~~~~~vLDiGcG-~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~--~~~~---~~~~~~ 149 (218)
...++.+||-+|+| .|..+.++++..-..+|+++|.++..++.+++.-. . .++ |..+ .++. .....+
T Consensus 188 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~lGa----~-~vi--~~~~~~~~~~~~i~~~t~g 260 (373)
T 1p0f_A 188 KVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGA----T-ECL--NPKDYDKPIYEVICEKTNG 260 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTC----S-EEE--CGGGCSSCHHHHHHHHTTS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCC----c-EEE--ecccccchHHHHHHHHhCC
Confidence 34677899999987 47777777765321279999999999999876411 1 111 1111 1110 111123
Q ss_pred cccEEEechhhcCCCcchHHHHHHHHHHhccCC-eEEEEEec
Q psy1107 150 SVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSG-GIILFRDY 190 (218)
Q Consensus 150 ~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~g-G~li~~~~ 190 (218)
.+|+|+.. .. ....+..+.+.|+++ |.+++...
T Consensus 261 g~Dvvid~-----~g---~~~~~~~~~~~l~~~~G~iv~~G~ 294 (373)
T 1p0f_A 261 GVDYAVEC-----AG---RIETMMNALQSTYCGSGVTVVLGL 294 (373)
T ss_dssp CBSEEEEC-----SC---CHHHHHHHHHTBCTTTCEEEECCC
T ss_pred CCCEEEEC-----CC---CHHHHHHHHHHHhcCCCEEEEEcc
Confidence 79999852 21 124677888999999 99887653
No 344
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=92.98 E-value=0.25 Score=39.52 Aligned_cols=99 Identities=16% Similarity=0.157 Sum_probs=62.7
Q ss_pred hcCCCcEEEEecCC-CchhHHHHhhcCCcc-EEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCC--cccc---cCCCC
Q psy1107 76 QDVGEGVLLEVGCG-VGNFIFPLLSWSKIC-YIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTE--DDIL---NQVPH 148 (218)
Q Consensus 76 ~~~~~~~vLDiGcG-~G~~~~~~~~~~~~~-~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~--~~~~---~~~~~ 148 (218)
...++.+||-+|+| .|..+.++++.. .+ +|+++|.++..++.+++.-. . .+ .|..+ .++. .....
T Consensus 189 ~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~~Vi~~~~~~~~~~~~~~lGa----~-~v--i~~~~~~~~~~~~~~~~~~ 260 (374)
T 1cdo_A 189 KVEPGSTCAVFGLGAVGLAAVMGCHSA-GAKRIIAVDLNPDKFEKAKVFGA----T-DF--VNPNDHSEPISQVLSKMTN 260 (374)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHHHTTC----C-EE--ECGGGCSSCHHHHHHHHHT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHHhCC----c-eE--EeccccchhHHHHHHHHhC
Confidence 44677899999986 477777777654 34 79999999999998876411 1 11 12211 0110 01111
Q ss_pred CcccEEEechhhcCCCcchHHHHHHHHHHhccCC-eEEEEEec
Q psy1107 149 NSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSG-GIILFRDY 190 (218)
Q Consensus 149 ~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~g-G~li~~~~ 190 (218)
+.+|+|+.. .. ....+..+.+.|+++ |.+++...
T Consensus 261 ~g~D~vid~-----~g---~~~~~~~~~~~l~~~~G~iv~~G~ 295 (374)
T 1cdo_A 261 GGVDFSLEC-----VG---NVGVMRNALESCLKGWGVSVLVGW 295 (374)
T ss_dssp SCBSEEEEC-----SC---CHHHHHHHHHTBCTTTCEEEECSC
T ss_pred CCCCEEEEC-----CC---CHHHHHHHHHHhhcCCcEEEEEcC
Confidence 368999852 21 124677888999999 99888653
No 345
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=92.94 E-value=0.18 Score=40.49 Aligned_cols=100 Identities=15% Similarity=0.101 Sum_probs=63.6
Q ss_pred hcCCCcEEEEecCC-CchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCC--Cccc---ccCCCCC
Q psy1107 76 QDVGEGVLLEVGCG-VGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVT--EDDI---LNQVPHN 149 (218)
Q Consensus 76 ~~~~~~~vLDiGcG-~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~--~~~~---~~~~~~~ 149 (218)
...++.+||-+|+| .|..+.++++..-..+|+++|.++..++.+++.-. ..+ .|.. ..++ ......+
T Consensus 190 ~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~lGa-----~~v--i~~~~~~~~~~~~i~~~~~g 262 (378)
T 3uko_A 190 KVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGV-----NEF--VNPKDHDKPIQEVIVDLTDG 262 (378)
T ss_dssp CCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTTTC-----CEE--ECGGGCSSCHHHHHHHHTTS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCC-----cEE--EccccCchhHHHHHHHhcCC
Confidence 45678899999987 47778788765322289999999999999886511 111 1211 1111 0111223
Q ss_pred cccEEEechhhcCCCcchHHHHHHHHHHhccCC-eEEEEEec
Q psy1107 150 SVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSG-GIILFRDY 190 (218)
Q Consensus 150 ~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~g-G~li~~~~ 190 (218)
.+|+|+-. .. -...+..+.+.|++| |.+++...
T Consensus 263 g~D~vid~-----~g---~~~~~~~~~~~l~~g~G~iv~~G~ 296 (378)
T 3uko_A 263 GVDYSFEC-----IG---NVSVMRAALECCHKGWGTSVIVGV 296 (378)
T ss_dssp CBSEEEEC-----SC---CHHHHHHHHHTBCTTTCEEEECSC
T ss_pred CCCEEEEC-----CC---CHHHHHHHHHHhhccCCEEEEEcc
Confidence 79999853 21 124678888999996 99888654
No 346
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=92.81 E-value=0.075 Score=42.11 Aligned_cols=99 Identities=18% Similarity=0.182 Sum_probs=62.5
Q ss_pred hcCCCcEEEEecCC-CchhHHHHhhcC-CccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCC-cccccCCC-CCcc
Q psy1107 76 QDVGEGVLLEVGCG-VGNFIFPLLSWS-KICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTE-DDILNQVP-HNSV 151 (218)
Q Consensus 76 ~~~~~~~vLDiGcG-~G~~~~~~~~~~-~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~-~~~~~~~~-~~~~ 151 (218)
.. ++.+||-+|+| .|..+.++++.. |.++|++++.++..++.+++.-. ..++ |..+ .+....+. ...+
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~lGa-----~~vi--~~~~~~~~~~~~~~g~g~ 239 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALELGA-----DYVS--EMKDAESLINKLTDGLGA 239 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHTC-----SEEE--CHHHHHHHHHHHHTTCCE
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHhCC-----CEEe--ccccchHHHHHhhcCCCc
Confidence 45 78899999997 367777777653 24689999999999888876411 1111 1111 11101111 2268
Q ss_pred cEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEec
Q psy1107 152 DIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 152 D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~ 190 (218)
|+|+.. .. ....+..+.+.|+++|.+++...
T Consensus 240 D~vid~-----~g---~~~~~~~~~~~l~~~G~iv~~g~ 270 (344)
T 2h6e_A 240 SIAIDL-----VG---TEETTYNLGKLLAQEGAIILVGM 270 (344)
T ss_dssp EEEEES-----SC---CHHHHHHHHHHEEEEEEEEECCC
T ss_pred cEEEEC-----CC---ChHHHHHHHHHhhcCCEEEEeCC
Confidence 999853 21 12367788899999999888653
No 347
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=92.62 E-value=0.7 Score=37.40 Aligned_cols=102 Identities=12% Similarity=0.014 Sum_probs=60.9
Q ss_pred hcCCCcEEEEecCC-CchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCccc----ccCCCCCc
Q psy1107 76 QDVGEGVLLEVGCG-VGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDI----LNQVPHNS 150 (218)
Q Consensus 76 ~~~~~~~vLDiGcG-~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~----~~~~~~~~ 150 (218)
...++.+||=+|+| .|..+.++++..-..+|+++|.++..++.+++.-. ..+ .|..+.++ ........
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa-----~~v--i~~~~~~~~~~i~~~t~g~g 282 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKELGA-----DHV--IDPTKENFVEAVLDYTNGLG 282 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHHTC-----SEE--ECTTTSCHHHHHHHHTTTCC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCC-----CEE--EcCCCCCHHHHHHHHhCCCC
Confidence 35678899999986 47777777765422289999999999999876511 111 12222111 11122336
Q ss_pred ccEEEechhhcCCCcchHHHHHHHHHHhc----cCCeEEEEEecC
Q psy1107 151 VDIATLIFVLSAIHPNKFSTVVKNLFIML----KSGGIILFRDYG 191 (218)
Q Consensus 151 ~D~i~~~~~l~~~~~~~~~~~l~~~~~~L----k~gG~li~~~~~ 191 (218)
+|+|+-. .. .....+..+.+.| +++|.+++....
T Consensus 283 ~D~vid~-----~g--~~~~~~~~~~~~l~~~~~~~G~iv~~G~~ 320 (404)
T 3ip1_A 283 AKLFLEA-----TG--VPQLVWPQIEEVIWRARGINATVAIVARA 320 (404)
T ss_dssp CSEEEEC-----SS--CHHHHHHHHHHHHHHCSCCCCEEEECSCC
T ss_pred CCEEEEC-----CC--CcHHHHHHHHHHHHhccCCCcEEEEeCCC
Confidence 9999852 21 1222344444455 999999986543
No 348
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=92.40 E-value=0.33 Score=38.88 Aligned_cols=99 Identities=15% Similarity=0.018 Sum_probs=62.8
Q ss_pred hcCCCcEEEEecCC-CchhHHHHhhcCCcc-EEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCC--cccc---cCCCC
Q psy1107 76 QDVGEGVLLEVGCG-VGNFIFPLLSWSKIC-YIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTE--DDIL---NQVPH 148 (218)
Q Consensus 76 ~~~~~~~vLDiGcG-~G~~~~~~~~~~~~~-~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~--~~~~---~~~~~ 148 (218)
...++.+||-+|+| .|..+.++++.. .+ +|+++|.++..++.++..-. ..++ |..+ .++. .....
T Consensus 192 ~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~lGa-----~~vi--~~~~~~~~~~~~v~~~~~ 263 (376)
T 1e3i_A 192 KVTPGSTCAVFGLGCVGLSAIIGCKIA-GASRIIAIDINGEKFPKAKALGA-----TDCL--NPRELDKPVQDVITELTA 263 (376)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHHHTTC-----SEEE--CGGGCSSCHHHHHHHHHT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHhCC-----cEEE--ccccccchHHHHHHHHhC
Confidence 34577899999987 477777877654 34 89999999999998876411 1111 2111 1110 01111
Q ss_pred CcccEEEechhhcCCCcchHHHHHHHHHHhccCC-eEEEEEec
Q psy1107 149 NSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSG-GIILFRDY 190 (218)
Q Consensus 149 ~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~g-G~li~~~~ 190 (218)
+.+|+|+.. .. ....+..+.+.|+++ |.+++...
T Consensus 264 ~g~Dvvid~-----~G---~~~~~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 264 GGVDYSLDC-----AG---TAQTLKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp SCBSEEEES-----SC---CHHHHHHHHHTBCTTTCEEEECCC
T ss_pred CCccEEEEC-----CC---CHHHHHHHHHHhhcCCCEEEEECC
Confidence 368999842 21 124678888999999 99887654
No 349
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=92.36 E-value=0.08 Score=41.16 Aligned_cols=60 Identities=20% Similarity=0.305 Sum_probs=39.0
Q ss_pred CCceEEeccCCCcccccCCCCCcccEEEechhhcCCC-----c-------------chHHHHHHHHHHhccCCeEEEEEe
Q psy1107 128 SKMNVFPCDVTEDDILNQVPHNSVDIATLIFVLSAIH-----P-------------NKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 128 ~~i~~~~~d~~~~~~~~~~~~~~~D~i~~~~~l~~~~-----~-------------~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
.++.++++|..+. ...+++++||+|++.-...... + .....++..+.++|+|||.+++..
T Consensus 20 ~~~~i~~gD~~~~--l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~ 97 (297)
T 2zig_A 20 GVHRLHVGDAREV--LASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVV 97 (297)
T ss_dssp -CEEEEESCHHHH--HTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCEEEECcHHHH--HhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 3567888887662 2345667899999854432110 0 112457788999999999988753
No 350
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=92.18 E-value=0.31 Score=38.94 Aligned_cols=99 Identities=16% Similarity=0.082 Sum_probs=62.2
Q ss_pred hcCCCcEEEEecCC-CchhHHHHhhcCCcc-EEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCC--cccc---cCCCC
Q psy1107 76 QDVGEGVLLEVGCG-VGNFIFPLLSWSKIC-YIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTE--DDIL---NQVPH 148 (218)
Q Consensus 76 ~~~~~~~vLDiGcG-~G~~~~~~~~~~~~~-~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~--~~~~---~~~~~ 148 (218)
...++.+||-+|+| .|..+.++++.. .+ +|+++|.++..++.+++.-. ..++ |..+ .++. .....
T Consensus 187 ~~~~g~~VlV~GaG~vG~~avqla~~~-Ga~~Vi~~~~~~~~~~~~~~lGa-----~~vi--~~~~~~~~~~~~v~~~~~ 258 (373)
T 2fzw_A 187 KLEPGSVCAVFGLGGVGLAVIMGCKVA-GASRIIGVDINKDKFARAKEFGA-----TECI--NPQDFSKPIQEVLIEMTD 258 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECSCGGGHHHHHHHTC-----SEEE--CGGGCSSCHHHHHHHHTT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHHHcCC-----ceEe--ccccccccHHHHHHHHhC
Confidence 34577899999986 377777777653 24 79999999999888875411 1111 2111 1110 11112
Q ss_pred CcccEEEechhhcCCCcchHHHHHHHHHHhccCC-eEEEEEec
Q psy1107 149 NSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSG-GIILFRDY 190 (218)
Q Consensus 149 ~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~g-G~li~~~~ 190 (218)
+.+|+|+.. .. ....+..+.+.|+++ |.+++...
T Consensus 259 ~g~D~vid~-----~g---~~~~~~~~~~~l~~~~G~iv~~G~ 293 (373)
T 2fzw_A 259 GGVDYSFEC-----IG---NVKVMRAALEACHKGWGVSVVVGV 293 (373)
T ss_dssp SCBSEEEEC-----SC---CHHHHHHHHHTBCTTTCEEEECSC
T ss_pred CCCCEEEEC-----CC---cHHHHHHHHHhhccCCcEEEEEec
Confidence 369999853 21 124677888999999 99888653
No 351
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=92.12 E-value=0.32 Score=38.66 Aligned_cols=92 Identities=12% Similarity=0.079 Sum_probs=58.6
Q ss_pred cEEEEecCC-CchhH-HHHh-hcCCccE-EEEEeCCHH---HHHHHHhCCcccCCCceEEeccCCCccccc--CCCCCcc
Q psy1107 81 GVLLEVGCG-VGNFI-FPLL-SWSKICY-IHACDISPR---AVNFFKLNPLYDASKMNVFPCDVTEDDILN--QVPHNSV 151 (218)
Q Consensus 81 ~~vLDiGcG-~G~~~-~~~~-~~~~~~~-v~~~D~s~~---~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~--~~~~~~~ 151 (218)
.+||-+|+| .|..+ .+++ +.. .++ |++++.++. ..+.+++.-. ... |..+.++.. .. .+.+
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~-Ga~~Vi~~~~~~~~~~~~~~~~~lGa------~~v--~~~~~~~~~i~~~-~gg~ 243 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDK-GYENLYCLGRRDRPDPTIDIIEELDA------TYV--DSRQTPVEDVPDV-YEQM 243 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTT-CCCEEEEEECCCSSCHHHHHHHHTTC------EEE--ETTTSCGGGHHHH-SCCE
T ss_pred CEEEEECCCHHHHHHHHHHHHHHc-CCcEEEEEeCCcccHHHHHHHHHcCC------ccc--CCCccCHHHHHHh-CCCC
Confidence 899999986 46777 7777 653 345 999999888 7888876411 111 222211111 11 2368
Q ss_pred cEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEec
Q psy1107 152 DIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 152 D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~ 190 (218)
|+|+-. .. -...+..+.+.|+++|.+++...
T Consensus 244 Dvvid~-----~g---~~~~~~~~~~~l~~~G~iv~~g~ 274 (357)
T 2b5w_A 244 DFIYEA-----TG---FPKHAIQSVQALAPNGVGALLGV 274 (357)
T ss_dssp EEEEEC-----SC---CHHHHHHHHHHEEEEEEEEECCC
T ss_pred CEEEEC-----CC---ChHHHHHHHHHHhcCCEEEEEeC
Confidence 998842 21 12357788899999999888653
No 352
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=92.12 E-value=0.43 Score=34.31 Aligned_cols=98 Identities=14% Similarity=0.050 Sum_probs=60.5
Q ss_pred hcCCCcEEEEecC--CCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccc----cCCCCC
Q psy1107 76 QDVGEGVLLEVGC--GVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDIL----NQVPHN 149 (218)
Q Consensus 76 ~~~~~~~vLDiGc--G~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~----~~~~~~ 149 (218)
...++.+||..|+ |.|..+..++... ..+|+++|.++...+.++.. +.. .. .|..+.+.. ......
T Consensus 35 ~~~~g~~vlV~Ga~ggiG~~~~~~~~~~-G~~V~~~~~~~~~~~~~~~~----g~~-~~--~d~~~~~~~~~~~~~~~~~ 106 (198)
T 1pqw_A 35 RLSPGERVLIHSATGGVGMAAVSIAKMI-GARIYTTAGSDAKREMLSRL----GVE-YV--GDSRSVDFADEILELTDGY 106 (198)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHTT----CCS-EE--EETTCSTHHHHHHHHTTTC
T ss_pred CCCCCCEEEEeeCCChHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHc----CCC-EE--eeCCcHHHHHHHHHHhCCC
Confidence 3457789999995 4566666665442 25899999999888777653 111 11 233332111 112223
Q ss_pred cccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEec
Q psy1107 150 SVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 150 ~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~ 190 (218)
.+|+++... . ...+..+.+.|+++|.+++...
T Consensus 107 ~~D~vi~~~-----g----~~~~~~~~~~l~~~G~~v~~g~ 138 (198)
T 1pqw_A 107 GVDVVLNSL-----A----GEAIQRGVQILAPGGRFIELGK 138 (198)
T ss_dssp CEEEEEECC-----C----THHHHHHHHTEEEEEEEEECSC
T ss_pred CCeEEEECC-----c----hHHHHHHHHHhccCCEEEEEcC
Confidence 699998532 1 1356788899999999888653
No 353
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=92.08 E-value=0.21 Score=37.91 Aligned_cols=79 Identities=11% Similarity=0.062 Sum_probs=53.9
Q ss_pred CCcEEEEecCCCch---hHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCC------CCC
Q psy1107 79 GEGVLLEVGCGVGN---FIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQV------PHN 149 (218)
Q Consensus 79 ~~~~vLDiGcG~G~---~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~------~~~ 149 (218)
+++++|=-|++.|. .+..+++.+ ++|+.+|.+++.++.+.+.....+.++.++.+|+.+.+-...+ .-+
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~G--a~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G 83 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALND--SIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYS 83 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 56778888877763 344455555 6899999999888777665555567899999999886421110 015
Q ss_pred cccEEEechh
Q psy1107 150 SVDIATLIFV 159 (218)
Q Consensus 150 ~~D~i~~~~~ 159 (218)
+.|+++.+..
T Consensus 84 ~iDiLVNNAG 93 (254)
T 4fn4_A 84 RIDVLCNNAG 93 (254)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCc
Confidence 7899887553
No 354
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=92.02 E-value=0.33 Score=38.15 Aligned_cols=97 Identities=11% Similarity=0.099 Sum_probs=60.9
Q ss_pred hcCCCcEEEEecC--CCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCC-cccc---cCCCCC
Q psy1107 76 QDVGEGVLLEVGC--GVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTE-DDIL---NQVPHN 149 (218)
Q Consensus 76 ~~~~~~~vLDiGc--G~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~-~~~~---~~~~~~ 149 (218)
...++.+||-.|+ |.|..+..++... .++++++|.++..++.++.. +.. ...|..+ .+.. .....+
T Consensus 142 ~~~~g~~vlV~Ga~ggiG~~~~~~~~~~-G~~V~~~~~~~~~~~~~~~~----g~~---~~~d~~~~~~~~~~~~~~~~~ 213 (333)
T 1v3u_A 142 GVKGGETVLVSAAAGAVGSVVGQIAKLK-GCKVVGAAGSDEKIAYLKQI----GFD---AAFNYKTVNSLEEALKKASPD 213 (333)
T ss_dssp CCCSSCEEEEESTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT----TCS---EEEETTSCSCHHHHHHHHCTT
T ss_pred CCCCCCEEEEecCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhc----CCc---EEEecCCHHHHHHHHHHHhCC
Confidence 3457789999998 4566666665543 35899999999888888543 111 1123333 1110 011124
Q ss_pred cccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 150 SVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 150 ~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
.+|+++.... . ..+..+.+.|+++|.+++..
T Consensus 214 ~~d~vi~~~g-------~--~~~~~~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 214 GYDCYFDNVG-------G--EFLNTVLSQMKDFGKIAICG 244 (333)
T ss_dssp CEEEEEESSC-------H--HHHHHHHTTEEEEEEEEECC
T ss_pred CCeEEEECCC-------h--HHHHHHHHHHhcCCEEEEEe
Confidence 7999885321 1 24678889999999998754
No 355
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=92.01 E-value=0.14 Score=40.54 Aligned_cols=100 Identities=17% Similarity=0.158 Sum_probs=61.9
Q ss_pred hcCCCcEEEEecCC--CchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCccc---ccCCCC-C
Q psy1107 76 QDVGEGVLLEVGCG--VGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDI---LNQVPH-N 149 (218)
Q Consensus 76 ~~~~~~~vLDiGcG--~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~---~~~~~~-~ 149 (218)
...++.+||-.|+| .|..+..++.....++++++|.++..++.++.. +.. .+ .|..+.+. ...... +
T Consensus 167 ~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~----g~~-~~--~~~~~~~~~~~~~~~~~~~ 239 (347)
T 1jvb_A 167 SLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRA----GAD-YV--INASMQDPLAEIRRITESK 239 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHH----TCS-EE--EETTTSCHHHHHHHHTTTS
T ss_pred CCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh----CCC-EE--ecCCCccHHHHHHHHhcCC
Confidence 45678899999997 455666666543135899999999888888653 111 11 12222111 011111 4
Q ss_pred cccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEec
Q psy1107 150 SVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 150 ~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~ 190 (218)
.+|+++... . ....+..+.+.|+++|.+++...
T Consensus 240 ~~d~vi~~~-----g---~~~~~~~~~~~l~~~G~iv~~g~ 272 (347)
T 1jvb_A 240 GVDAVIDLN-----N---SEKTLSVYPKALAKQGKYVMVGL 272 (347)
T ss_dssp CEEEEEESC-----C---CHHHHTTGGGGEEEEEEEEECCS
T ss_pred CceEEEECC-----C---CHHHHHHHHHHHhcCCEEEEECC
Confidence 799988532 1 12467778899999999888553
No 356
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=92.00 E-value=0.42 Score=37.69 Aligned_cols=99 Identities=13% Similarity=0.092 Sum_probs=63.1
Q ss_pred hcCCCcEEEEecCC-CchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccC---CCCCcc
Q psy1107 76 QDVGEGVLLEVGCG-VGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQ---VPHNSV 151 (218)
Q Consensus 76 ~~~~~~~vLDiGcG-~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~---~~~~~~ 151 (218)
...++.+||-+|+| .|..+..++... .+++++++.++..++.++..-. . .+ .|..+.++... .. +.+
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~lGa----~-~~--~d~~~~~~~~~~~~~~-~~~ 231 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAM-GLNVVAVDIGDEKLELAKELGA----D-LV--VNPLKEDAAKFMKEKV-GGV 231 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHTTC----S-EE--ECTTTSCHHHHHHHHH-SSE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHCCC----C-EE--ecCCCccHHHHHHHHh-CCC
Confidence 35677899999985 567777776653 3599999999999988876411 1 11 23322211100 01 368
Q ss_pred cEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 152 DIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 152 D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
|+|+.. .. ....+..+.+.|+++|.+++....
T Consensus 232 d~vid~-----~g---~~~~~~~~~~~l~~~G~~v~~g~~ 263 (339)
T 1rjw_A 232 HAAVVT-----AV---SKPAFQSAYNSIRRGGACVLVGLP 263 (339)
T ss_dssp EEEEES-----SC---CHHHHHHHHHHEEEEEEEEECCCC
T ss_pred CEEEEC-----CC---CHHHHHHHHHHhhcCCEEEEeccc
Confidence 988853 21 124667888999999998886543
No 357
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=91.90 E-value=0.25 Score=39.73 Aligned_cols=100 Identities=12% Similarity=0.060 Sum_probs=62.9
Q ss_pred cCCCcEEEEecCC-CchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCC---Ccc----cccCCCC
Q psy1107 77 DVGEGVLLEVGCG-VGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVT---EDD----ILNQVPH 148 (218)
Q Consensus 77 ~~~~~~vLDiGcG-~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~---~~~----~~~~~~~ 148 (218)
..++.+||-+|+| .|..+.++++..-..+|++++.++..++.++..-. -.++ |.. +.+ +......
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~lGa-----~~vi--~~~~~~~~~~~~~v~~~~~g 265 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGA-----DLTL--NRRETSVEERRKAIMDITHG 265 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTC-----SEEE--ETTTSCHHHHHHHHHHHTTT
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHcCC-----cEEE--eccccCcchHHHHHHHHhCC
Confidence 4567899999976 57777787766421499999999999999886411 1121 111 111 1111122
Q ss_pred CcccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 149 NSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 149 ~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
..+|+|+... . ....+..+.+.|+++|.+++....
T Consensus 266 ~g~Dvvid~~-----g---~~~~~~~~~~~l~~~G~iv~~G~~ 300 (380)
T 1vj0_A 266 RGADFILEAT-----G---DSRALLEGSELLRRGGFYSVAGVA 300 (380)
T ss_dssp SCEEEEEECS-----S---CTTHHHHHHHHEEEEEEEEECCCC
T ss_pred CCCcEEEECC-----C---CHHHHHHHHHHHhcCCEEEEEecC
Confidence 3699998532 1 113567788999999999886543
No 358
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=91.70 E-value=0.65 Score=36.54 Aligned_cols=102 Identities=13% Similarity=0.046 Sum_probs=62.7
Q ss_pred hhcCCCcEEEEecCC-CchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccc---cC-CCCC
Q psy1107 75 NQDVGEGVLLEVGCG-VGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDIL---NQ-VPHN 149 (218)
Q Consensus 75 ~~~~~~~~vLDiGcG-~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~---~~-~~~~ 149 (218)
....++.+||=.|+| .|..+.++++..-...++++|.++..++.+++.-. .+.+ |..+.+.. .. ....
T Consensus 156 ~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~lGa-----~~~i--~~~~~~~~~~~~~~~~~~ 228 (346)
T 4a2c_A 156 AQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGA-----MQTF--NSSEMSAPQMQSVLRELR 228 (346)
T ss_dssp TTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC-----SEEE--ETTTSCHHHHHHHHGGGC
T ss_pred hccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHcCC-----eEEE--eCCCCCHHHHHHhhcccC
Confidence 445678899999987 45666667665433467899999999999987621 1111 11111100 00 1123
Q ss_pred cccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 150 SVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 150 ~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
.+|+|+.. . .....++.+.++|+++|.+++....
T Consensus 229 g~d~v~d~-----~---G~~~~~~~~~~~l~~~G~~v~~g~~ 262 (346)
T 4a2c_A 229 FNQLILET-----A---GVPQTVELAVEIAGPHAQLALVGTL 262 (346)
T ss_dssp SSEEEEEC-----S---CSHHHHHHHHHHCCTTCEEEECCCC
T ss_pred Cccccccc-----c---cccchhhhhhheecCCeEEEEEecc
Confidence 56777642 2 1235677888999999999886543
No 359
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=91.63 E-value=0.29 Score=38.49 Aligned_cols=99 Identities=10% Similarity=0.105 Sum_probs=63.3
Q ss_pred hhcCCCcEEEEecC--CCchhHHHHhhcCCccEEEEEeCCHHHHHHH-HhCCcccCCCceEEeccCCCccccc---CCCC
Q psy1107 75 NQDVGEGVLLEVGC--GVGNFIFPLLSWSKICYIHACDISPRAVNFF-KLNPLYDASKMNVFPCDVTEDDILN---QVPH 148 (218)
Q Consensus 75 ~~~~~~~~vLDiGc--G~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~-~~~~~~~~~~i~~~~~d~~~~~~~~---~~~~ 148 (218)
....++.+||-.|+ |.|..+..++... .++|++++.++..++.+ +.. . .. .. .|..+.+... ....
T Consensus 145 ~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~~-g---~~-~~--~~~~~~~~~~~~~~~~~ 216 (336)
T 4b7c_A 145 GQPKNGETVVISGAAGAVGSVAGQIARLK-GCRVVGIAGGAEKCRFLVEEL-G---FD-GA--IDYKNEDLAAGLKRECP 216 (336)
T ss_dssp TCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTT-C---CS-EE--EETTTSCHHHHHHHHCT
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHc-C---CC-EE--EECCCHHHHHHHHHhcC
Confidence 34567889999998 4677777777653 35999999999998888 443 1 11 11 1222221110 1112
Q ss_pred CcccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEec
Q psy1107 149 NSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 149 ~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~ 190 (218)
+.+|+++.. .. ...+..+.+.|+++|.+++...
T Consensus 217 ~~~d~vi~~-----~g----~~~~~~~~~~l~~~G~iv~~G~ 249 (336)
T 4b7c_A 217 KGIDVFFDN-----VG----GEILDTVLTRIAFKARIVLCGA 249 (336)
T ss_dssp TCEEEEEES-----SC----HHHHHHHHTTEEEEEEEEECCC
T ss_pred CCceEEEEC-----CC----cchHHHHHHHHhhCCEEEEEee
Confidence 469998853 21 1367888899999999988653
No 360
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=91.62 E-value=0.4 Score=37.90 Aligned_cols=94 Identities=15% Similarity=0.107 Sum_probs=59.6
Q ss_pred CCcEEEEe-cCC-CchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcc--cccCCCCCcccEE
Q psy1107 79 GEGVLLEV-GCG-VGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDD--ILNQVPHNSVDIA 154 (218)
Q Consensus 79 ~~~~vLDi-GcG-~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~~~~~~D~i 154 (218)
++.+||=. |+| .|..+.++++.. .++|++++.++..++.+++.-. . .++ |..+.. .........+|+|
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lGa----~-~vi--~~~~~~~~~~~~~~~~g~Dvv 221 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAY-GLRVITTASRNETIEWTKKMGA----D-IVL--NHKESLLNQFKTQGIELVDYV 221 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEECCSHHHHHHHHHHTC----S-EEE--CTTSCHHHHHHHHTCCCEEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCC----c-EEE--ECCccHHHHHHHhCCCCccEE
Confidence 67889988 454 677777777653 3599999999999988886411 1 111 111110 0011123469998
Q ss_pred EechhhcCCCcchHHHHHHHHHHhccCCeEEEEE
Q psy1107 155 TLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFR 188 (218)
Q Consensus 155 ~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~ 188 (218)
+.. . .-...+..+.+.|+++|.++..
T Consensus 222 ~d~-----~---g~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 222 FCT-----F---NTDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp EES-----S---CHHHHHHHHHHHEEEEEEEEES
T ss_pred EEC-----C---CchHHHHHHHHHhccCCEEEEE
Confidence 852 2 2335678888999999998764
No 361
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=91.36 E-value=0.33 Score=36.66 Aligned_cols=109 Identities=7% Similarity=0.015 Sum_probs=59.9
Q ss_pred CCcEEEEecCCCc---hhHHHHhhcCCccEEEEE-eCCHHHHHHHHhCCcccCCCceEEeccCCCcccccC-CC-----C
Q psy1107 79 GEGVLLEVGCGVG---NFIFPLLSWSKICYIHAC-DISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQ-VP-----H 148 (218)
Q Consensus 79 ~~~~vLDiGcG~G---~~~~~~~~~~~~~~v~~~-D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~-~~-----~ 148 (218)
.++++|=.|++.| ..+..+++.+ .+|+.+ +.+....+.+.......+.++.++.+|+.+.+-... +. -
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~G--~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQEG--ANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKF 84 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCC--CEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 4567888887665 2344444444 477777 555555444433333334678899999987532111 10 1
Q ss_pred CcccEEEechhhc-------CCCcchHH-----------HHHHHHHHhccCCeEEEEEe
Q psy1107 149 NSVDIATLIFVLS-------AIHPNKFS-----------TVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 149 ~~~D~i~~~~~l~-------~~~~~~~~-----------~~l~~~~~~Lk~gG~li~~~ 189 (218)
+..|+++.+.... ..+++++. .+.+.+...++++|.++...
T Consensus 85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 143 (259)
T 3edm_A 85 GEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFS 143 (259)
T ss_dssp CSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEc
Confidence 3689888765322 12222322 23344556666677777654
No 362
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=91.21 E-value=0.42 Score=37.04 Aligned_cols=80 Identities=13% Similarity=0.045 Sum_probs=51.3
Q ss_pred CCcEEEEecCCCc---hhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCC-C-----CC
Q psy1107 79 GEGVLLEVGCGVG---NFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQV-P-----HN 149 (218)
Q Consensus 79 ~~~~vLDiGcG~G---~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~-~-----~~ 149 (218)
.++++|=.|++.| .++..+++.+ .+|++++.++..++.+.......+.++.++.+|+.+.+-...+ . .+
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 107 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARRG--ARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLG 107 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCC
Confidence 4568888887755 3344444444 5899999998877766554433456789999999885321111 0 13
Q ss_pred cccEEEechhh
Q psy1107 150 SVDIATLIFVL 160 (218)
Q Consensus 150 ~~D~i~~~~~l 160 (218)
..|+++.+..+
T Consensus 108 ~id~lvnnAg~ 118 (301)
T 3tjr_A 108 GVDVVFSNAGI 118 (301)
T ss_dssp SCSEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 68998886543
No 363
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=91.04 E-value=0.55 Score=37.40 Aligned_cols=102 Identities=9% Similarity=-0.092 Sum_probs=63.5
Q ss_pred hhcCCCcEEEEecCC-CchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCc--ccccCCCCCcc
Q psy1107 75 NQDVGEGVLLEVGCG-VGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTED--DILNQVPHNSV 151 (218)
Q Consensus 75 ~~~~~~~~vLDiGcG-~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~~~~~~ 151 (218)
....++.+||-+|+| .|..+.++++.. .+++++++.++..++.++..- . ..++..+-.+. .+........+
T Consensus 185 ~~~~~g~~VlV~G~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~lG----a-~~vi~~~~~~~~~~v~~~~~g~g~ 258 (363)
T 3uog_A 185 GHLRAGDRVVVQGTGGVALFGLQIAKAT-GAEVIVTSSSREKLDRAFALG----A-DHGINRLEEDWVERVYALTGDRGA 258 (363)
T ss_dssp TCCCTTCEEEEESSBHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHT----C-SEEEETTTSCHHHHHHHHHTTCCE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEecCchhHHHHHHcC----C-CEEEcCCcccHHHHHHHHhCCCCc
Confidence 345678899999987 377777777654 359999999999988887641 1 11221110000 00011122369
Q ss_pred cEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 152 DIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 152 D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
|+|+.... . ..+..+.+.|+++|.+++....
T Consensus 259 D~vid~~g----~-----~~~~~~~~~l~~~G~iv~~G~~ 289 (363)
T 3uog_A 259 DHILEIAG----G-----AGLGQSLKAVAPDGRISVIGVL 289 (363)
T ss_dssp EEEEEETT----S-----SCHHHHHHHEEEEEEEEEECCC
T ss_pred eEEEECCC----h-----HHHHHHHHHhhcCCEEEEEecC
Confidence 99986422 1 2456678899999999987543
No 364
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=91.04 E-value=1.9 Score=30.44 Aligned_cols=99 Identities=16% Similarity=0.104 Sum_probs=55.9
Q ss_pred CcEEEEecCCC-chhH-HHHhhc-CCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCC-CCCcccEEE
Q psy1107 80 EGVLLEVGCGV-GNFI-FPLLSW-SKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQV-PHNSVDIAT 155 (218)
Q Consensus 80 ~~~vLDiGcG~-G~~~-~~~~~~-~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~-~~~~~D~i~ 155 (218)
+.+|+=+|+|. |... ..+... + ..|+++|.++..++.++.. .+.++.+|..+....... .-..+|+|+
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g--~~V~vid~~~~~~~~~~~~------g~~~~~gd~~~~~~l~~~~~~~~ad~vi 110 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYG--KISLGIEIREEAAQQHRSE------GRNVISGDATDPDFWERILDTGHVKLVL 110 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHC--SCEEEEESCHHHHHHHHHT------TCCEEECCTTCHHHHHTBCSCCCCCEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhccC--CeEEEEECCHHHHHHHHHC------CCCEEEcCCCCHHHHHhccCCCCCCEEE
Confidence 45788888862 3332 222333 3 4899999999888777643 244566676654322222 223689888
Q ss_pred echhhcCCCcchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 156 LIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 156 ~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
+. .+.......+-.+.+.+.|++.+++....
T Consensus 111 ~~-----~~~~~~~~~~~~~~~~~~~~~~ii~~~~~ 141 (183)
T 3c85_A 111 LA-----MPHHQGNQTALEQLQRRNYKGQIAAIAEY 141 (183)
T ss_dssp EC-----CSSHHHHHHHHHHHHHTTCCSEEEEEESS
T ss_pred Ee-----CCChHHHHHHHHHHHHHCCCCEEEEEECC
Confidence 63 22122222333345556777777776533
No 365
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=91.02 E-value=0.7 Score=33.82 Aligned_cols=97 Identities=9% Similarity=0.070 Sum_probs=57.4
Q ss_pred EEEEecCCCchhHHHHhhcC--CccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEechh
Q psy1107 82 VLLEVGCGVGNFIFPLLSWS--KICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATLIFV 159 (218)
Q Consensus 82 ~vLDiGcG~G~~~~~~~~~~--~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~~~~ 159 (218)
+|+=+|+ |..+..++... .+..++++|.++..++..... ....++.+|..+........-...|+|++.
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~-----~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~-- 72 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK-----LKATIIHGDGSHKEILRDAEVSKNDVVVIL-- 72 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH-----SSSEEEESCTTSHHHHHHHTCCTTCEEEEC--
T ss_pred EEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH-----cCCeEEEcCCCCHHHHHhcCcccCCEEEEe--
Confidence 4566665 55555555431 235899999999988765432 135678888877543322222367888863
Q ss_pred hcCCCcchHHHHHHHHHHhccCCeEEEEEec
Q psy1107 160 LSAIHPNKFSTVVKNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 160 l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~ 190 (218)
.+.+.....+..+.+.+.+...++....
T Consensus 73 ---~~~d~~n~~~~~~a~~~~~~~~iia~~~ 100 (218)
T 3l4b_C 73 ---TPRDEVNLFIAQLVMKDFGVKRVVSLVN 100 (218)
T ss_dssp ---CSCHHHHHHHHHHHHHTSCCCEEEECCC
T ss_pred ---cCCcHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 2323344455555565667777766543
No 366
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=90.95 E-value=3.3 Score=32.26 Aligned_cols=92 Identities=20% Similarity=0.182 Sum_probs=56.5
Q ss_pred CcEEEEecCCC-c-hhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEec
Q psy1107 80 EGVLLEVGCGV-G-NFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATLI 157 (218)
Q Consensus 80 ~~~vLDiGcG~-G-~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~~ 157 (218)
..+|.=||+|. | .++..++..+...+|+++|.++..++.+.+.-. +.-...|..+. . -...|+|+.
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~-----~~~~~~~~~~~----~--~~~aDvVil- 100 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGI-----IDEGTTSIAKV----E--DFSPDFVML- 100 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTS-----CSEEESCTTGG----G--GGCCSEEEE-
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCC-----cchhcCCHHHH----h--hccCCEEEE-
Confidence 36899999873 3 334445554533389999999998888775411 10111111110 0 124788886
Q ss_pred hhhcCCCcchHHHHHHHHHHhccCCeEEEE
Q psy1107 158 FVLSAIHPNKFSTVVKNLFIMLKSGGIILF 187 (218)
Q Consensus 158 ~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~ 187 (218)
.+|+.....++..+...++++.+++-
T Consensus 101 ----avp~~~~~~vl~~l~~~l~~~~iv~d 126 (314)
T 3ggo_A 101 ----SSPVRTFREIAKKLSYILSEDATVTD 126 (314)
T ss_dssp ----CSCGGGHHHHHHHHHHHSCTTCEEEE
T ss_pred ----eCCHHHHHHHHHHHhhccCCCcEEEE
Confidence 35656677888899999999875543
No 367
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=90.93 E-value=0.62 Score=36.72 Aligned_cols=105 Identities=14% Similarity=-0.009 Sum_probs=61.5
Q ss_pred hhcCCCcEEEEecCCCc-hhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccE
Q psy1107 75 NQDVGEGVLLEVGCGVG-NFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDI 153 (218)
Q Consensus 75 ~~~~~~~~vLDiGcG~G-~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~ 153 (218)
....++.+||=+|+|.+ ..+..++...-..+|+++|.++..++.++..-... -+.....|+.+ .+........+|.
T Consensus 159 ~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~Ga~~--~i~~~~~~~~~-~v~~~t~g~g~d~ 235 (348)
T 4eez_A 159 SGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGADV--TINSGDVNPVD-EIKKITGGLGVQS 235 (348)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHTTCSE--EEEC-CCCHHH-HHHHHTTSSCEEE
T ss_pred cCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhcCCeE--EEeCCCCCHHH-HhhhhcCCCCceE
Confidence 34567889999999854 55555555433469999999999998888762210 01111111111 0111122224666
Q ss_pred EEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEec
Q psy1107 154 ATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 154 i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~ 190 (218)
++... .-...+....+.|+++|.+++...
T Consensus 236 ~~~~~--------~~~~~~~~~~~~l~~~G~~v~~g~ 264 (348)
T 4eez_A 236 AIVCA--------VARIAFEQAVASLKPMGKMVAVAV 264 (348)
T ss_dssp EEECC--------SCHHHHHHHHHTEEEEEEEEECCC
T ss_pred EEEec--------cCcchhheeheeecCCceEEEEec
Confidence 65421 123467788899999999888653
No 368
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=90.75 E-value=0.61 Score=35.77 Aligned_cols=106 Identities=8% Similarity=0.078 Sum_probs=65.4
Q ss_pred CCcEEEEecCCCc---hhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCC------CCC
Q psy1107 79 GEGVLLEVGCGVG---NFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQV------PHN 149 (218)
Q Consensus 79 ~~~~vLDiGcG~G---~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~------~~~ 149 (218)
+++++|=-|++.| ..+..+++.+ ++|+.+|.+.+.++.+.+. .+.+..++.+|+.+.+-...+ .-+
T Consensus 28 ~gKvalVTGas~GIG~aiA~~la~~G--a~V~i~~r~~~~l~~~~~~---~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 102 (273)
T 4fgs_A 28 NAKIAVITGATSGIGLAAAKRFVAEG--ARVFITGRRKDVLDAAIAE---IGGGAVGIQADSANLAELDRLYEKVKAEAG 102 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHH---HCTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHHH---cCCCeEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 5778888888776 3344455555 6899999999887766543 345788889999886321110 115
Q ss_pred cccEEEechhhc------CCCcchHH-----------HHHHHHHHhccCCeEEEEEe
Q psy1107 150 SVDIATLIFVLS------AIHPNKFS-----------TVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 150 ~~D~i~~~~~l~------~~~~~~~~-----------~~l~~~~~~Lk~gG~li~~~ 189 (218)
+.|+++.+.... .+++++++ .+.+.+.+.++.+|.++...
T Consensus 103 ~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInis 159 (273)
T 4fgs_A 103 RIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTG 159 (273)
T ss_dssp CEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEC
T ss_pred CCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 789888755322 22334444 23344566777777766543
No 369
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=90.67 E-value=0.79 Score=35.36 Aligned_cols=79 Identities=18% Similarity=0.108 Sum_probs=47.7
Q ss_pred CCcEEEEecCCCc---hhHHHHhhcCCccEEEEEeCC------------HHHHHHHHhCCcccCCCceEEeccCCCcccc
Q psy1107 79 GEGVLLEVGCGVG---NFIFPLLSWSKICYIHACDIS------------PRAVNFFKLNPLYDASKMNVFPCDVTEDDIL 143 (218)
Q Consensus 79 ~~~~vLDiGcG~G---~~~~~~~~~~~~~~v~~~D~s------------~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 143 (218)
.++++|=.|++.| ..+..+++.+ .+|+++|.+ ...++.+.......+.++.++.+|+.+.+-.
T Consensus 27 ~gk~~lVTGas~GIG~aia~~la~~G--~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 104 (299)
T 3t7c_A 27 EGKVAFITGAARGQGRSHAITLAREG--ADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAM 104 (299)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTT--CEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHH
Confidence 4668888887765 2344444444 589998876 4444444333333346789999999875321
Q ss_pred cC-CC-----CCcccEEEechh
Q psy1107 144 NQ-VP-----HNSVDIATLIFV 159 (218)
Q Consensus 144 ~~-~~-----~~~~D~i~~~~~ 159 (218)
.. +. -+..|+++.+..
T Consensus 105 ~~~~~~~~~~~g~iD~lv~nAg 126 (299)
T 3t7c_A 105 QAAVDDGVTQLGRLDIVLANAA 126 (299)
T ss_dssp HHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHhCCCCEEEECCC
Confidence 11 00 136898887654
No 370
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=90.26 E-value=0.96 Score=34.82 Aligned_cols=108 Identities=13% Similarity=0.054 Sum_probs=62.3
Q ss_pred CCcEEEEecCCCc-----hhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCC------C
Q psy1107 79 GEGVLLEVGCGVG-----NFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQV------P 147 (218)
Q Consensus 79 ~~~~vLDiGcG~G-----~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~------~ 147 (218)
.++++|=.|++.| ..+..+++.+ .+|+.++.++...+.+....... .++.++.+|+.+.+-...+ .
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G--~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~ 106 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAG--AELAFTYQGDALKKRVEPLAEEL-GAFVAGHCDVADAASIDAVFETLEKK 106 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTT--CEEEEEECSHHHHHHHHHHHHHH-TCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHHHHHHhc-CCceEEECCCCCHHHHHHHHHHHHHh
Confidence 4678888887633 2344455555 58989988865444443332222 3578889999885321110 0
Q ss_pred CCcccEEEechhhc----------CCCcchHH-----------HHHHHHHHhccCCeEEEEEe
Q psy1107 148 HNSVDIATLIFVLS----------AIHPNKFS-----------TVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 148 ~~~~D~i~~~~~l~----------~~~~~~~~-----------~~l~~~~~~Lk~gG~li~~~ 189 (218)
-+..|+++.+..+. ..+++++. .+++.+...++.+|.++...
T Consensus 107 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~is 169 (293)
T 3grk_A 107 WGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLT 169 (293)
T ss_dssp TSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred cCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEe
Confidence 14689998865432 12223332 33445566777788887755
No 371
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=90.24 E-value=0.76 Score=35.33 Aligned_cols=109 Identities=17% Similarity=0.174 Sum_probs=60.7
Q ss_pred CCcEEEEecCCCc---hhHHHHhhcCCccEEEEEeCCHH-HHHHHHhCCcccCCCceEEeccCCCcccccC-CC-----C
Q psy1107 79 GEGVLLEVGCGVG---NFIFPLLSWSKICYIHACDISPR-AVNFFKLNPLYDASKMNVFPCDVTEDDILNQ-VP-----H 148 (218)
Q Consensus 79 ~~~~vLDiGcG~G---~~~~~~~~~~~~~~v~~~D~s~~-~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~-~~-----~ 148 (218)
.++++|=.|++.| ..+..+++.+ .+|+.++.+.. ..+.+.......+.++.++.+|+.+..-... +. -
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 123 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEG--ANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQL 123 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCC--CEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4567888887655 2344444444 58888887654 2333332222334678899999987532111 00 1
Q ss_pred CcccEEEechhhcC-------CCcchHH-----------HHHHHHHHhccCCeEEEEEe
Q psy1107 149 NSVDIATLIFVLSA-------IHPNKFS-----------TVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 149 ~~~D~i~~~~~l~~-------~~~~~~~-----------~~l~~~~~~Lk~gG~li~~~ 189 (218)
+..|+++.+..... .+.+++. .+++.+...++.+|.++...
T Consensus 124 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~is 182 (291)
T 3ijr_A 124 GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTA 182 (291)
T ss_dssp SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEEC
T ss_pred CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEe
Confidence 36898887643221 1223333 34445566777888777654
No 372
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=90.06 E-value=0.87 Score=36.25 Aligned_cols=98 Identities=14% Similarity=0.134 Sum_probs=62.8
Q ss_pred hcCCCcEEEEec--CCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccc---cCCCCCc
Q psy1107 76 QDVGEGVLLEVG--CGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDIL---NQVPHNS 150 (218)
Q Consensus 76 ~~~~~~~vLDiG--cG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~---~~~~~~~ 150 (218)
...++.+||-.| .|.|..+..++... .++|++++.++..++.++..- .. .++ |..+.++. .......
T Consensus 160 ~~~~g~~VlV~Ga~G~iG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~G----a~-~~~--~~~~~~~~~~~~~~~~~g 231 (362)
T 2c0c_A 160 GLSEGKKVLVTAAAGGTGQFAMQLSKKA-KCHVIGTCSSDEKSAFLKSLG----CD-RPI--NYKTEPVGTVLKQEYPEG 231 (362)
T ss_dssp CCCTTCEEEETTTTBTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTT----CS-EEE--ETTTSCHHHHHHHHCTTC
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHcC----Cc-EEE--ecCChhHHHHHHHhcCCC
Confidence 456788999999 35778888887654 358999999998888887641 11 111 21111110 0111236
Q ss_pred ccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEec
Q psy1107 151 VDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 151 ~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~ 190 (218)
+|+|+.. .. . ..+..+.+.|+++|.+++...
T Consensus 232 ~D~vid~-----~g--~--~~~~~~~~~l~~~G~iv~~g~ 262 (362)
T 2c0c_A 232 VDVVYES-----VG--G--AMFDLAVDALATKGRLIVIGF 262 (362)
T ss_dssp EEEEEEC-----SC--T--HHHHHHHHHEEEEEEEEECCC
T ss_pred CCEEEEC-----CC--H--HHHHHHHHHHhcCCEEEEEeC
Confidence 8999853 21 1 467788899999999888653
No 373
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=90.06 E-value=0.44 Score=36.53 Aligned_cols=79 Identities=9% Similarity=0.025 Sum_probs=49.8
Q ss_pred CCcEEEEecCCCc---hhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCC-C-----CC
Q psy1107 79 GEGVLLEVGCGVG---NFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQV-P-----HN 149 (218)
Q Consensus 79 ~~~~vLDiGcG~G---~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~-~-----~~ 149 (218)
.++++|=.|++.| ..+..+++.+ .+|++++.++..++.+.......+.++.++.+|+.+.+-...+ . -+
T Consensus 7 ~gk~vlVTGas~GIG~aia~~la~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 84 (280)
T 3tox_A 7 EGKIAIVTGASSGIGRAAALLFAREG--AKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFG 84 (280)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTT--CEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 3567777777655 2344444444 5899999998877666554444456788999999875321111 0 13
Q ss_pred cccEEEechh
Q psy1107 150 SVDIATLIFV 159 (218)
Q Consensus 150 ~~D~i~~~~~ 159 (218)
..|+++.+..
T Consensus 85 ~iD~lvnnAg 94 (280)
T 3tox_A 85 GLDTAFNNAG 94 (280)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 6898887654
No 374
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=90.04 E-value=0.5 Score=37.22 Aligned_cols=99 Identities=17% Similarity=0.104 Sum_probs=61.1
Q ss_pred hhcCCCcEEEEecCC--CchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccc----cCCCC
Q psy1107 75 NQDVGEGVLLEVGCG--VGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDIL----NQVPH 148 (218)
Q Consensus 75 ~~~~~~~~vLDiGcG--~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~----~~~~~ 148 (218)
....++.+||-.|+| .|..+..++... .+++++++.++..++.+++. +.. ..+ |..+.+.. .....
T Consensus 140 ~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~l----ga~-~~~--~~~~~~~~~~~~~~~~~ 211 (340)
T 3gms_A 140 LNLQRNDVLLVNACGSAIGHLFAQLSQIL-NFRLIAVTRNNKHTEELLRL----GAA-YVI--DTSTAPLYETVMELTNG 211 (340)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHHH----TCS-EEE--ETTTSCHHHHHHHHTTT
T ss_pred cccCCCCEEEEeCCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhC----CCc-EEE--eCCcccHHHHHHHHhCC
Confidence 345678899999987 567777777653 35999999999888888764 111 111 22221111 11223
Q ss_pred CcccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEec
Q psy1107 149 NSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 149 ~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~ 190 (218)
..+|+++.. .. .. ......+.|+++|.+++...
T Consensus 212 ~g~Dvvid~-----~g---~~-~~~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 212 IGADAAIDS-----IG---GP-DGNELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp SCEEEEEES-----SC---HH-HHHHHHHTEEEEEEEEECCC
T ss_pred CCCcEEEEC-----CC---Ch-hHHHHHHHhcCCCEEEEEee
Confidence 379999853 21 11 12334589999999988654
No 375
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=90.00 E-value=0.84 Score=34.58 Aligned_cols=109 Identities=16% Similarity=0.144 Sum_probs=61.0
Q ss_pred CCcEEEEecCCCc---hhHHHHhhcCCccEEEEEeCC-HHHHHHHHhCCcccCCCceEEeccCCCcccccC-CC-----C
Q psy1107 79 GEGVLLEVGCGVG---NFIFPLLSWSKICYIHACDIS-PRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQ-VP-----H 148 (218)
Q Consensus 79 ~~~~vLDiGcG~G---~~~~~~~~~~~~~~v~~~D~s-~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~-~~-----~ 148 (218)
.++++|=.|++.| ..+..+++.+ .+|+.++.. ....+.........+.++.++.+|+.+..-... +. -
T Consensus 17 ~~k~~lVTGas~gIG~aia~~l~~~G--~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 94 (270)
T 3is3_A 17 DGKVALVTGSGRGIGAAVAVHLGRLG--AKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHF 94 (270)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHTT--CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCC--CEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4567887777655 2344444444 578877653 444443333333335678899999988532111 00 1
Q ss_pred CcccEEEechhhcCC------CcchHH-----------HHHHHHHHhccCCeEEEEEe
Q psy1107 149 NSVDIATLIFVLSAI------HPNKFS-----------TVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 149 ~~~D~i~~~~~l~~~------~~~~~~-----------~~l~~~~~~Lk~gG~li~~~ 189 (218)
+..|+++.+..+... +++++. .+.+.+.+.++++|.+++..
T Consensus 95 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~is 152 (270)
T 3is3_A 95 GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTS 152 (270)
T ss_dssp SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 367988876543322 223333 33455667777788777754
No 376
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=89.99 E-value=0.23 Score=37.76 Aligned_cols=79 Identities=15% Similarity=0.012 Sum_probs=52.0
Q ss_pred CCcEEEEecCCCc---hhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccC------CCCC
Q psy1107 79 GEGVLLEVGCGVG---NFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQ------VPHN 149 (218)
Q Consensus 79 ~~~~vLDiGcG~G---~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~------~~~~ 149 (218)
+++++|=-|++.| ..+..+++.+ ++|+..|.+++.++.+.+.....+.++.++.+|+.+.+-... -.-+
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~G--a~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 85 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAAG--ARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGI 85 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTT--CEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence 5667777777665 2344444545 699999999988776655544445688899999988632110 1125
Q ss_pred cccEEEechh
Q psy1107 150 SVDIATLIFV 159 (218)
Q Consensus 150 ~~D~i~~~~~ 159 (218)
+.|+++.+..
T Consensus 86 ~iDiLVNNAG 95 (255)
T 4g81_D 86 HVDILINNAG 95 (255)
T ss_dssp CCCEEEECCC
T ss_pred CCcEEEECCC
Confidence 7899988553
No 377
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=89.91 E-value=0.62 Score=35.89 Aligned_cols=109 Identities=13% Similarity=0.149 Sum_probs=60.7
Q ss_pred CCcEEEEecCCCc---hhHHHHhhcCCccEEEEEeCC--HHHHHHHHhCCcccCCCceEEeccCCCcccccCC-C-----
Q psy1107 79 GEGVLLEVGCGVG---NFIFPLLSWSKICYIHACDIS--PRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQV-P----- 147 (218)
Q Consensus 79 ~~~~vLDiGcG~G---~~~~~~~~~~~~~~v~~~D~s--~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~-~----- 147 (218)
.++++|=.|++.| ..+..+++.+ .+|+.++.+ ....+.........+.++.++.+|+.+.+-...+ .
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~~G--~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 125 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYAREG--ADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREA 125 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCC--CEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 4567888887655 2334444444 578888775 2333333332233346788899999875321110 0
Q ss_pred CCcccEEEechhhcC-------CCcchHH-----------HHHHHHHHhccCCeEEEEEe
Q psy1107 148 HNSVDIATLIFVLSA-------IHPNKFS-----------TVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 148 ~~~~D~i~~~~~l~~-------~~~~~~~-----------~~l~~~~~~Lk~gG~li~~~ 189 (218)
-+..|+++.+..... .+++++. .+++.+...++.+|.++...
T Consensus 126 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~is 185 (294)
T 3r3s_A 126 LGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTS 185 (294)
T ss_dssp HTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEEC
Confidence 136898887654322 1223333 33445566777788877754
No 378
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=89.82 E-value=0.55 Score=35.42 Aligned_cols=79 Identities=11% Similarity=0.127 Sum_probs=49.4
Q ss_pred CCcEEEEecCCCchhHHHH----hhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccC-CC-----C
Q psy1107 79 GEGVLLEVGCGVGNFIFPL----LSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQ-VP-----H 148 (218)
Q Consensus 79 ~~~~vLDiGcG~G~~~~~~----~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~-~~-----~ 148 (218)
.+.++|=.|++.| ++..+ ++.+ .+|+.++-++..++.........+.++.++.+|+.+.+-... +. .
T Consensus 28 ~~k~vlITGas~g-IG~~la~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 104 (262)
T 3rkr_A 28 SGQVAVVTGASRG-IGAAIARKLGSLG--ARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAH 104 (262)
T ss_dssp TTCEEEESSTTSH-HHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCh-HHHHHHHHHHHCC--CEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhc
Confidence 4567887776544 44444 4444 589999999887766655444345678899999987532111 00 1
Q ss_pred CcccEEEechhh
Q psy1107 149 NSVDIATLIFVL 160 (218)
Q Consensus 149 ~~~D~i~~~~~l 160 (218)
+..|+++.+..+
T Consensus 105 g~id~lv~~Ag~ 116 (262)
T 3rkr_A 105 GRCDVLVNNAGV 116 (262)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 368988876543
No 379
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=89.79 E-value=0.79 Score=35.00 Aligned_cols=79 Identities=19% Similarity=0.098 Sum_probs=47.9
Q ss_pred CCcEEEEecCCCc---hhHHHHhhcCCccEEEEEeCC----------------HHHHHHHHhCCcccCCCceEEeccCCC
Q psy1107 79 GEGVLLEVGCGVG---NFIFPLLSWSKICYIHACDIS----------------PRAVNFFKLNPLYDASKMNVFPCDVTE 139 (218)
Q Consensus 79 ~~~~vLDiGcG~G---~~~~~~~~~~~~~~v~~~D~s----------------~~~~~~~~~~~~~~~~~i~~~~~d~~~ 139 (218)
.++++|=.|++.| ..+..+++.+ .+|+++|.+ ...++.........+.++.++.+|+.+
T Consensus 10 ~~k~~lVTGas~gIG~aia~~la~~G--~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~ 87 (286)
T 3uve_A 10 EGKVAFVTGAARGQGRSHAVRLAQEG--ADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRD 87 (286)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTT--CEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCC--CeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCC
Confidence 4568888887765 2344444444 589998876 444444443333334678899999987
Q ss_pred cccccCC-C-----CCcccEEEechh
Q psy1107 140 DDILNQV-P-----HNSVDIATLIFV 159 (218)
Q Consensus 140 ~~~~~~~-~-----~~~~D~i~~~~~ 159 (218)
.+-...+ . -+..|+++.+..
T Consensus 88 ~~~v~~~~~~~~~~~g~id~lv~nAg 113 (286)
T 3uve_A 88 YDALKAAVDSGVEQLGRLDIIVANAG 113 (286)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECCc
Confidence 5321111 0 136899888654
No 380
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=89.60 E-value=1.1 Score=34.99 Aligned_cols=92 Identities=14% Similarity=0.127 Sum_probs=60.1
Q ss_pred EEEEecC--CCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEechh
Q psy1107 82 VLLEVGC--GVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATLIFV 159 (218)
Q Consensus 82 ~vLDiGc--G~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~~~~ 159 (218)
+||=.|+ |.|..+.++++.. .++|++++.++...+.+++. +.. .++ |..+......+..+.+|+++-
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~-Ga~Vi~~~~~~~~~~~~~~l----Ga~-~vi--~~~~~~~~~~~~~~~~d~v~d--- 217 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKL-GYQVAAVSGRESTHGYLKSL----GAN-RIL--SRDEFAESRPLEKQLWAGAID--- 217 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCGGGHHHHHHH----TCS-EEE--EGGGSSCCCSSCCCCEEEEEE---
T ss_pred eEEEECCCcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhc----CCC-EEE--ecCCHHHHHhhcCCCccEEEE---
Confidence 4888887 4778888888764 35999999999999988764 111 111 111111112233357898874
Q ss_pred hcCCCcchHHHHHHHHHHhccCCeEEEEEec
Q psy1107 160 LSAIHPNKFSTVVKNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 160 l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~ 190 (218)
... . ..+..+.+.|+++|.+++...
T Consensus 218 --~~g--~--~~~~~~~~~l~~~G~iv~~G~ 242 (324)
T 3nx4_A 218 --TVG--D--KVLAKVLAQMNYGGCVAACGL 242 (324)
T ss_dssp --SSC--H--HHHHHHHHTEEEEEEEEECCC
T ss_pred --CCC--c--HHHHHHHHHHhcCCEEEEEec
Confidence 232 1 277888999999999988653
No 381
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=89.55 E-value=0.36 Score=38.13 Aligned_cols=95 Identities=18% Similarity=0.201 Sum_probs=59.6
Q ss_pred CCcEEEEecCC-CchhHHHHhhcCCcc-EEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccC---CCCCcccE
Q psy1107 79 GEGVLLEVGCG-VGNFIFPLLSWSKIC-YIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQ---VPHNSVDI 153 (218)
Q Consensus 79 ~~~~vLDiGcG-~G~~~~~~~~~~~~~-~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~---~~~~~~D~ 153 (218)
++.+||-+|+| .|..+.++++.. .+ +|++++.++..++.++.. .. .+ .|..+.++... .....+|+
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~-Ga~~Vi~~~~~~~~~~~~~~l-a~-----~v--~~~~~~~~~~~~~~~~~~g~D~ 234 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRAS-GAGPILVSDPNPYRLAFARPY-AD-----RL--VNPLEEDLLEVVRRVTGSGVEV 234 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHT-TCCSEEEECSCHHHHGGGTTT-CS-----EE--ECTTTSCHHHHHHHHHSSCEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHh-HH-----hc--cCcCccCHHHHHHHhcCCCCCE
Confidence 77899999986 467777777653 35 899999999887777653 21 11 12222111000 01236899
Q ss_pred EEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEec
Q psy1107 154 ATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 154 i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~ 190 (218)
|+.. .. ....+..+.+.|+++|.+++...
T Consensus 235 vid~-----~g---~~~~~~~~~~~l~~~G~iv~~g~ 263 (343)
T 2dq4_A 235 LLEF-----SG---NEAAIHQGLMALIPGGEARILGI 263 (343)
T ss_dssp EEEC-----SC---CHHHHHHHHHHEEEEEEEEECCC
T ss_pred EEEC-----CC---CHHHHHHHHHHHhcCCEEEEEec
Confidence 9853 21 12456788899999999888653
No 382
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=89.43 E-value=0.35 Score=38.05 Aligned_cols=60 Identities=18% Similarity=0.163 Sum_probs=39.3
Q ss_pred CCceEEeccCCCcccccCCCCCcccEEEechhhcCCC------------cchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 128 SKMNVFPCDVTEDDILNQVPHNSVDIATLIFVLSAIH------------PNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 128 ~~i~~~~~d~~~~~~~~~~~~~~~D~i~~~~~l~~~~------------~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
....++++|..+. ...++++++|+|++.-...... .......+..+.++|+|||.+++..
T Consensus 13 ~~~~ii~gD~~~~--l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~ 84 (323)
T 1boo_A 13 SNGSMYIGDSLEL--LESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDF 84 (323)
T ss_dssp SSEEEEESCHHHH--GGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCceEEeCcHHHH--HhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEE
Confidence 3566777776542 1235567899999853322110 0135678888999999999998854
No 383
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=89.31 E-value=0.67 Score=34.91 Aligned_cols=110 Identities=15% Similarity=0.150 Sum_probs=61.9
Q ss_pred cCCCcEEEEecCC-CchhHHHH----hhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccC-C----
Q psy1107 77 DVGEGVLLEVGCG-VGNFIFPL----LSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQ-V---- 146 (218)
Q Consensus 77 ~~~~~~vLDiGcG-~G~~~~~~----~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~-~---- 146 (218)
..++++||=.|++ +|.++..+ ++.+ .+|+.++.+....+.+....... ..+.++.+|+.+.+-... +
T Consensus 11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~ 87 (271)
T 3ek2_A 11 FLDGKRILLTGLLSNRSIAYGIAKACKREG--AELAFTYVGDRFKDRITEFAAEF-GSELVFPCDVADDAQIDALFASLK 87 (271)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTT--CEEEEEESSGGGHHHHHHHHHHT-TCCCEEECCTTCHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHHcC--CCEEEEecchhhHHHHHHHHHHc-CCcEEEECCCCCHHHHHHHHHHHH
Confidence 3457788988875 24444444 4444 58999987755444443332222 357889999988532111 0
Q ss_pred -CCCcccEEEechhhcC-----------CCcchHH-----------HHHHHHHHhccCCeEEEEEe
Q psy1107 147 -PHNSVDIATLIFVLSA-----------IHPNKFS-----------TVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 147 -~~~~~D~i~~~~~l~~-----------~~~~~~~-----------~~l~~~~~~Lk~gG~li~~~ 189 (218)
.-+..|+++.+..+.. .+++++. .+++.+...++++|.++...
T Consensus 88 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 153 (271)
T 3ek2_A 88 THWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLS 153 (271)
T ss_dssp HHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred HHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEe
Confidence 0136899988654322 3333333 23344556666678777654
No 384
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=89.27 E-value=0.71 Score=34.70 Aligned_cols=110 Identities=10% Similarity=-0.015 Sum_probs=59.7
Q ss_pred CCcEEEEecCCCchhHHHHhhcC---CccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccC-CC-----CC
Q psy1107 79 GEGVLLEVGCGVGNFIFPLLSWS---KICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQ-VP-----HN 149 (218)
Q Consensus 79 ~~~~vLDiGcG~G~~~~~~~~~~---~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~-~~-----~~ 149 (218)
++.+||=.| |+|.++..++... ...+|++++-+....+.+.......+.++.++.+|+.+..-... +. .+
T Consensus 3 ~~k~vlITG-asggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 81 (276)
T 1wma_A 3 GIHVALVTG-GNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG 81 (276)
T ss_dssp CCCEEEESS-CSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 345677665 4555555554331 23589999988766554433322224578899999987532111 10 13
Q ss_pred cccEEEechhhcCCC------cchHH-----------HHHHHHHHhccCCeEEEEEe
Q psy1107 150 SVDIATLIFVLSAIH------PNKFS-----------TVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 150 ~~D~i~~~~~l~~~~------~~~~~-----------~~l~~~~~~Lk~gG~li~~~ 189 (218)
.+|+++......... ++++. .+++.+.+.++++|.+++..
T Consensus 82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~s 138 (276)
T 1wma_A 82 GLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVS 138 (276)
T ss_dssp SEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEEC
Confidence 689888755332111 12222 23444556666677777654
No 385
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=89.26 E-value=0.64 Score=34.97 Aligned_cols=106 Identities=11% Similarity=0.206 Sum_probs=62.6
Q ss_pred CCcEEEEecCCCc---hhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCC------CCC
Q psy1107 79 GEGVLLEVGCGVG---NFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQV------PHN 149 (218)
Q Consensus 79 ~~~~vLDiGcG~G---~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~------~~~ 149 (218)
.++++|=.|++.| ..+..+++.+ .+|+.++.++..++...... +.++.++.+|+.+.+-...+ .-+
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G--~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 81 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGG--AEVLLTGRNESNIARIREEF---GPRVHALRSDIADLNEIAVLGAAAGQTLG 81 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHHhC
Confidence 4567888877655 2344444444 58999999987766655432 34688899999875321110 013
Q ss_pred cccEEEechhhcC------CCcchHH-----------HHHHHHHHhccCCeEEEEEe
Q psy1107 150 SVDIATLIFVLSA------IHPNKFS-----------TVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 150 ~~D~i~~~~~l~~------~~~~~~~-----------~~l~~~~~~Lk~gG~li~~~ 189 (218)
..|+++.+..+.. .+++++. .+.+.+...++++|.++...
T Consensus 82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~is 138 (255)
T 4eso_A 82 AIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTS 138 (255)
T ss_dssp SEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEEC
Confidence 6898887653322 2223333 23344556667788777654
No 386
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=89.25 E-value=2.3 Score=29.01 Aligned_cols=103 Identities=7% Similarity=-0.001 Sum_probs=57.3
Q ss_pred cEEEEecCCCchhHHHHhhcC--CccEEEEEeCC-HHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEec
Q psy1107 81 GVLLEVGCGVGNFIFPLLSWS--KICYIHACDIS-PRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATLI 157 (218)
Q Consensus 81 ~~vLDiGcG~G~~~~~~~~~~--~~~~v~~~D~s-~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~~ 157 (218)
.+|+=+|+ |..+..++... ....|+++|.+ +...+..... ....+.++.+|..+........-...|+|++.
T Consensus 4 ~~vlI~G~--G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~---~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 78 (153)
T 1id1_A 4 DHFIVCGH--SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQR---LGDNADVIPGDSNDSSVLKKAGIDRCRAILAL 78 (153)
T ss_dssp SCEEEECC--SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHH---HCTTCEEEESCTTSHHHHHHHTTTTCSEEEEC
T ss_pred CcEEEECC--CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHh---hcCCCeEEEcCCCCHHHHHHcChhhCCEEEEe
Confidence 46777776 44554444321 12589999997 4433333321 11347788888877543322222367888863
Q ss_pred hhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCCC
Q psy1107 158 FVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLH 193 (218)
Q Consensus 158 ~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~~ 193 (218)
.+.+.....+....+.+.|...++.......
T Consensus 79 -----~~~d~~n~~~~~~a~~~~~~~~ii~~~~~~~ 109 (153)
T 1id1_A 79 -----SDNDADNAFVVLSAKDMSSDVKTVLAVSDSK 109 (153)
T ss_dssp -----SSCHHHHHHHHHHHHHHTSSSCEEEECSSGG
T ss_pred -----cCChHHHHHHHHHHHHHCCCCEEEEEECCHH
Confidence 2223344555556666777777777554433
No 387
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=89.20 E-value=1 Score=35.30 Aligned_cols=98 Identities=17% Similarity=0.122 Sum_probs=62.7
Q ss_pred hcCCCcEEEEecC--CCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccc----cCCCCC
Q psy1107 76 QDVGEGVLLEVGC--GVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDIL----NQVPHN 149 (218)
Q Consensus 76 ~~~~~~~vLDiGc--G~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~----~~~~~~ 149 (218)
...++.+||-.|+ |.|..+..+++.. .+++++++.++..++.+++.-. . .. .|..+.+.. ......
T Consensus 145 ~~~~g~~vlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~ga----~-~~--~~~~~~~~~~~~~~~~~~~ 216 (334)
T 3qwb_A 145 HVKKGDYVLLFAAAGGVGLILNQLLKMK-GAHTIAVASTDEKLKIAKEYGA----E-YL--INASKEDILRQVLKFTNGK 216 (334)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTC----S-EE--EETTTSCHHHHHHHHTTTS
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHcCC----c-EE--EeCCCchHHHHHHHHhCCC
Confidence 4567889999994 4677777777653 3599999999999988876421 1 11 122221111 111233
Q ss_pred cccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEec
Q psy1107 150 SVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 150 ~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~ 190 (218)
.+|+|+.... . ..+..+.+.|+++|.+++...
T Consensus 217 g~D~vid~~g-------~--~~~~~~~~~l~~~G~iv~~G~ 248 (334)
T 3qwb_A 217 GVDASFDSVG-------K--DTFEISLAALKRKGVFVSFGN 248 (334)
T ss_dssp CEEEEEECCG-------G--GGHHHHHHHEEEEEEEEECCC
T ss_pred CceEEEECCC-------h--HHHHHHHHHhccCCEEEEEcC
Confidence 6999985321 1 356778889999999988653
No 388
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=89.09 E-value=0.37 Score=37.53 Aligned_cols=91 Identities=15% Similarity=0.142 Sum_probs=58.8
Q ss_pred hhcCCCcEEEEecCC-CchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccE
Q psy1107 75 NQDVGEGVLLEVGCG-VGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDI 153 (218)
Q Consensus 75 ~~~~~~~~vLDiGcG-~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~ 153 (218)
....++.+||=.|+| .|..+.++++.. .+++++++ ++...+.+++.-. ..++. | . ..+ ...+|+
T Consensus 138 ~~~~~g~~VlV~GaG~vG~~a~qlak~~-Ga~Vi~~~-~~~~~~~~~~lGa-----~~v~~-d--~----~~v-~~g~Dv 202 (315)
T 3goh_A 138 IPLTKQREVLIVGFGAVNNLLTQMLNNA-GYVVDLVS-ASLSQALAAKRGV-----RHLYR-E--P----SQV-TQKYFA 202 (315)
T ss_dssp SCCCSCCEEEEECCSHHHHHHHHHHHHH-TCEEEEEC-SSCCHHHHHHHTE-----EEEES-S--G----GGC-CSCEEE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEE-ChhhHHHHHHcCC-----CEEEc-C--H----HHh-CCCccE
Confidence 344678899999996 577888887764 35999999 8888888876411 11221 3 1 222 457999
Q ss_pred EEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 154 ATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 154 i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
|+-. .. . ..+..+.+.|+++|.+++..
T Consensus 203 v~d~-----~g--~--~~~~~~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 203 IFDA-----VN--S--QNAAALVPSLKANGHIICIQ 229 (315)
T ss_dssp EECC----------------TTGGGEEEEEEEEEEC
T ss_pred EEEC-----CC--c--hhHHHHHHHhcCCCEEEEEe
Confidence 9842 21 1 12256788999999998864
No 389
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=88.97 E-value=0.89 Score=34.53 Aligned_cols=81 Identities=17% Similarity=0.117 Sum_probs=48.7
Q ss_pred CCcEEEEecCCCc---hhHHHHhhcCCccEEEEEeCC------------HHHHHHHHhCCcccCCCceEEeccCCCcccc
Q psy1107 79 GEGVLLEVGCGVG---NFIFPLLSWSKICYIHACDIS------------PRAVNFFKLNPLYDASKMNVFPCDVTEDDIL 143 (218)
Q Consensus 79 ~~~~vLDiGcG~G---~~~~~~~~~~~~~~v~~~D~s------------~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 143 (218)
.++++|=.|++.| ..+..+++.+ .+|+++|.+ ...++.........+.++.++.+|+.+.+-.
T Consensus 12 ~gk~vlVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v 89 (278)
T 3sx2_A 12 TGKVAFITGAARGQGRAHAVRLAADG--ADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESL 89 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTT--CEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCC--CeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHH
Confidence 4567888877655 3344444444 589999876 5554444433333346789999999875321
Q ss_pred cC-CC-----CCcccEEEechhhc
Q psy1107 144 NQ-VP-----HNSVDIATLIFVLS 161 (218)
Q Consensus 144 ~~-~~-----~~~~D~i~~~~~l~ 161 (218)
.. +. -+..|+++.+..+.
T Consensus 90 ~~~~~~~~~~~g~id~lv~nAg~~ 113 (278)
T 3sx2_A 90 SAALQAGLDELGRLDIVVANAGIA 113 (278)
T ss_dssp HHHHHHHHHHHCCCCEEEECCCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCC
Confidence 11 10 13689998866544
No 390
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=88.61 E-value=1.1 Score=34.11 Aligned_cols=80 Identities=21% Similarity=0.191 Sum_probs=48.6
Q ss_pred CCcEEEEecCCCc---hhHHHHhhcCCccEEEEEeC-------------CHHHHHHHHhCCcccCCCceEEeccCCCccc
Q psy1107 79 GEGVLLEVGCGVG---NFIFPLLSWSKICYIHACDI-------------SPRAVNFFKLNPLYDASKMNVFPCDVTEDDI 142 (218)
Q Consensus 79 ~~~~vLDiGcG~G---~~~~~~~~~~~~~~v~~~D~-------------s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~ 142 (218)
.++++|=.|++.| ..+..+++.+ .+|+++|. +...++.+.......+.++.++.+|+.+.+-
T Consensus 14 ~gk~~lVTGas~gIG~a~a~~la~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 91 (280)
T 3pgx_A 14 QGRVAFITGAARGQGRSHAVRLAAEG--ADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAA 91 (280)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTT--CEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC--CEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHH
Confidence 4567888877665 2344444444 58999887 5555555544433345678899999987532
Q ss_pred ccCC-C-----CCcccEEEechhh
Q psy1107 143 LNQV-P-----HNSVDIATLIFVL 160 (218)
Q Consensus 143 ~~~~-~-----~~~~D~i~~~~~l 160 (218)
...+ . -+..|+++.+...
T Consensus 92 v~~~~~~~~~~~g~id~lvnnAg~ 115 (280)
T 3pgx_A 92 LRELVADGMEQFGRLDVVVANAGV 115 (280)
T ss_dssp HHHHHHHHHHHHCCCCEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCC
Confidence 1111 0 1368988886543
No 391
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=88.55 E-value=0.9 Score=35.75 Aligned_cols=98 Identities=15% Similarity=0.190 Sum_probs=61.9
Q ss_pred hcCCCcEEEEecC--CCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCc-ccc---cCCCCC
Q psy1107 76 QDVGEGVLLEVGC--GVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTED-DIL---NQVPHN 149 (218)
Q Consensus 76 ~~~~~~~vLDiGc--G~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~~~---~~~~~~ 149 (218)
...++.+||-.|+ |.|..+..++... .+++++++.++..++.+++... .. .. .|..+. ++. .....+
T Consensus 152 ~~~~g~~vlI~Ga~g~iG~~~~~~a~~~-G~~V~~~~~~~~~~~~~~~~~g---~~-~~--~d~~~~~~~~~~~~~~~~~ 224 (345)
T 2j3h_A 152 SPKEGETVYVSAASGAVGQLVGQLAKMM-GCYVVGSAGSKEKVDLLKTKFG---FD-DA--FNYKEESDLTAALKRCFPN 224 (345)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTSC---CS-EE--EETTSCSCSHHHHHHHCTT
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHcC---Cc-eE--EecCCHHHHHHHHHHHhCC
Confidence 3457789999997 4677777776653 3589999999998888873321 11 11 132221 110 011124
Q ss_pred cccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 150 SVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 150 ~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
.+|+++.. .. . ..+..+.+.|+++|.+++..
T Consensus 225 ~~d~vi~~-----~g--~--~~~~~~~~~l~~~G~~v~~G 255 (345)
T 2j3h_A 225 GIDIYFEN-----VG--G--KMLDAVLVNMNMHGRIAVCG 255 (345)
T ss_dssp CEEEEEES-----SC--H--HHHHHHHTTEEEEEEEEECC
T ss_pred CCcEEEEC-----CC--H--HHHHHHHHHHhcCCEEEEEc
Confidence 68998853 21 1 36788889999999998854
No 392
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=88.54 E-value=5.1 Score=29.40 Aligned_cols=97 Identities=7% Similarity=-0.058 Sum_probs=58.9
Q ss_pred CcEEEEecCCCchhHHHHhhcC--CccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEec
Q psy1107 80 EGVLLEVGCGVGNFIFPLLSWS--KICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATLI 157 (218)
Q Consensus 80 ~~~vLDiGcG~G~~~~~~~~~~--~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~~ 157 (218)
..+|+=+|+| ..+..++... ... |+++|.++..++.+. . .+.++.+|..+...+....-...|.|++.
T Consensus 9 ~~~viI~G~G--~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-~------~~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 78 (234)
T 2aef_A 9 SRHVVICGWS--ESTLECLRELRGSEV-FVLAEDENVRKKVLR-S------GANFVHGDPTRVSDLEKANVRGARAVIVD 78 (234)
T ss_dssp -CEEEEESCC--HHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-T------TCEEEESCTTCHHHHHHTTCTTCSEEEEC
T ss_pred CCEEEEECCC--hHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-c------CCeEEEcCCCCHHHHHhcCcchhcEEEEc
Confidence 4578888875 5555555442 234 899999988777665 1 36788899887543322222367888863
Q ss_pred hhhcCCCcchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 158 FVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 158 ~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
.+.+.....+....+.+.|+..++.....
T Consensus 79 -----~~~d~~n~~~~~~a~~~~~~~~iia~~~~ 107 (234)
T 2aef_A 79 -----LESDSETIHCILGIRKIDESVRIIAEAER 107 (234)
T ss_dssp -----CSCHHHHHHHHHHHHHHCSSSEEEEECSS
T ss_pred -----CCCcHHHHHHHHHHHHHCCCCeEEEEECC
Confidence 23233344445556667887677765433
No 393
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=88.37 E-value=0.97 Score=35.69 Aligned_cols=96 Identities=15% Similarity=0.093 Sum_probs=60.8
Q ss_pred CCcEEEEecCC-CchhHHHHhhcCCcc-EEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccc----cCCCCCccc
Q psy1107 79 GEGVLLEVGCG-VGNFIFPLLSWSKIC-YIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDIL----NQVPHNSVD 152 (218)
Q Consensus 79 ~~~~vLDiGcG-~G~~~~~~~~~~~~~-~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~----~~~~~~~~D 152 (218)
++.+||-+|+| .|..+.++++.. .+ +|++++.++..++.++..-. ..+ .|..+.++. .......+|
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~-Ga~~Vi~~~~~~~~~~~~~~~Ga-----~~~--~~~~~~~~~~~v~~~~~g~g~D 238 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKAS-GAYPVIVSEPSDFRRELAKKVGA-----DYV--INPFEEDVVKEVMDITDGNGVD 238 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHT-TCCSEEEECSCHHHHHHHHHHTC-----SEE--ECTTTSCHHHHHHHHTTTSCEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHhCC-----CEE--ECCCCcCHHHHHHHHcCCCCCC
Confidence 77899999996 467777777653 35 89999999998888875311 111 122221110 111223689
Q ss_pred EEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEec
Q psy1107 153 IATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 153 ~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~ 190 (218)
+|+.. .. ....+..+.+.|+++|.++....
T Consensus 239 ~vid~-----~g---~~~~~~~~~~~l~~~G~iv~~g~ 268 (348)
T 2d8a_A 239 VFLEF-----SG---APKALEQGLQAVTPAGRVSLLGL 268 (348)
T ss_dssp EEEEC-----SC---CHHHHHHHHHHEEEEEEEEECCC
T ss_pred EEEEC-----CC---CHHHHHHHHHHHhcCCEEEEEcc
Confidence 99853 21 12466778899999999888653
No 394
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=88.34 E-value=0.97 Score=35.58 Aligned_cols=98 Identities=12% Similarity=-0.022 Sum_probs=62.5
Q ss_pred hcCCCcEEEEecC--CCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccc----cCCCCC
Q psy1107 76 QDVGEGVLLEVGC--GVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDIL----NQVPHN 149 (218)
Q Consensus 76 ~~~~~~~vLDiGc--G~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~----~~~~~~ 149 (218)
...++.+||-.|+ |.|..+..++... .+++++++.++..++.++.. +.. .. .|..+.++. ......
T Consensus 163 ~~~~g~~vlV~Gasg~iG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~~----ga~-~~--~d~~~~~~~~~~~~~~~~~ 234 (343)
T 2eih_A 163 GVRPGDDVLVMAAGSGVSVAAIQIAKLF-GARVIATAGSEDKLRRAKAL----GAD-ET--VNYTHPDWPKEVRRLTGGK 234 (343)
T ss_dssp CCCTTCEEEECSTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHH----TCS-EE--EETTSTTHHHHHHHHTTTT
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhc----CCC-EE--EcCCcccHHHHHHHHhCCC
Confidence 3457789999998 5777777777653 35899999999988888653 111 11 233322111 111223
Q ss_pred cccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEec
Q psy1107 150 SVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 150 ~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~ 190 (218)
.+|+++.... . ..+..+.+.|+++|.+++...
T Consensus 235 ~~d~vi~~~g----~-----~~~~~~~~~l~~~G~~v~~g~ 266 (343)
T 2eih_A 235 GADKVVDHTG----A-----LYFEGVIKATANGGRIAIAGA 266 (343)
T ss_dssp CEEEEEESSC----S-----SSHHHHHHHEEEEEEEEESSC
T ss_pred CceEEEECCC----H-----HHHHHHHHhhccCCEEEEEec
Confidence 6999986432 1 245677889999999887553
No 395
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=88.30 E-value=1.7 Score=34.40 Aligned_cols=98 Identities=15% Similarity=0.122 Sum_probs=61.5
Q ss_pred hcCCCcEEEEecC--CCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccc----cCCCCC
Q psy1107 76 QDVGEGVLLEVGC--GVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDIL----NQVPHN 149 (218)
Q Consensus 76 ~~~~~~~vLDiGc--G~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~----~~~~~~ 149 (218)
...++.+||-.|+ |.|..+..++... .+++++++.++..++.++..-. . .. .|..+.+.. ......
T Consensus 167 ~~~~g~~vlV~GasggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~ga----~-~~--~d~~~~~~~~~~~~~~~~~ 238 (351)
T 1yb5_A 167 CVKAGESVLVHGASGGVGLAACQIARAY-GLKILGTAGTEEGQKIVLQNGA----H-EV--FNHREVNYIDKIKKYVGEK 238 (351)
T ss_dssp CCCTTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTC----S-EE--EETTSTTHHHHHHHHHCTT
T ss_pred CCCCcCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHcCC----C-EE--EeCCCchHHHHHHHHcCCC
Confidence 3457789999997 4566666666543 3589999999998888765411 1 11 232222111 111223
Q ss_pred cccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEec
Q psy1107 150 SVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 150 ~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~ 190 (218)
.+|+++.... ...+..+.+.|+++|.+++...
T Consensus 239 ~~D~vi~~~G---------~~~~~~~~~~l~~~G~iv~~g~ 270 (351)
T 1yb5_A 239 GIDIIIEMLA---------NVNLSKDLSLLSHGGRVIVVGS 270 (351)
T ss_dssp CEEEEEESCH---------HHHHHHHHHHEEEEEEEEECCC
T ss_pred CcEEEEECCC---------hHHHHHHHHhccCCCEEEEEec
Confidence 6899985321 1356778899999999888653
No 396
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=88.22 E-value=2.3 Score=29.07 Aligned_cols=105 Identities=15% Similarity=0.101 Sum_probs=54.0
Q ss_pred CCCcEEEEecCCC-chhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEe
Q psy1107 78 VGEGVLLEVGCGV-GNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATL 156 (218)
Q Consensus 78 ~~~~~vLDiGcG~-G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~ 156 (218)
.+..+|+=+|+|. |......+... ...|+++|.++..++.++.. ....++..|..+........-..+|+|+.
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~-g~~V~vid~~~~~~~~~~~~-----~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~ 90 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSS-GHSVVVVDKNEYAFHRLNSE-----FSGFTVVGDAAEFETLKECGMEKADMVFA 90 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCGGGGGGSCTT-----CCSEEEESCTTSHHHHHTTTGGGCSEEEE
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhC-CCeEEEEECCHHHHHHHHhc-----CCCcEEEecCCCHHHHHHcCcccCCEEEE
Confidence 4567899998863 33322222221 25899999988765443311 12345556654432211111235788886
Q ss_pred chhhcCCCcchHHHHHHHHHHhccCCeEEEEEecCCC
Q psy1107 157 IFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLH 193 (218)
Q Consensus 157 ~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~~~ 193 (218)
. .+.......+..+.+.+.+...++....+..
T Consensus 91 ~-----~~~~~~~~~~~~~~~~~~~~~~iv~~~~~~~ 122 (155)
T 2g1u_A 91 F-----TNDDSTNFFISMNARYMFNVENVIARVYDPE 122 (155)
T ss_dssp C-----SSCHHHHHHHHHHHHHTSCCSEEEEECSSGG
T ss_pred E-----eCCcHHHHHHHHHHHHHCCCCeEEEEECCHH
Confidence 3 2222333444445555556666666554433
No 397
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=88.06 E-value=0.46 Score=37.80 Aligned_cols=100 Identities=13% Similarity=-0.025 Sum_probs=61.1
Q ss_pred hcCCCcEEEEecCC-CchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCc-ccccCCCCCcccE
Q psy1107 76 QDVGEGVLLEVGCG-VGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTED-DILNQVPHNSVDI 153 (218)
Q Consensus 76 ~~~~~~~vLDiGcG-~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~~~~~~D~ 153 (218)
...++.+||-+|+| .|..+.++++.. .++|++++.++..++.++.. +.. .++ |..+. +....+. +.+|+
T Consensus 176 ~~~~g~~VlV~GaG~vG~~~~qlak~~-Ga~Vi~~~~~~~~~~~~~~l----Ga~-~v~--~~~~~~~~~~~~~-~~~D~ 246 (360)
T 1piw_A 176 GCGPGKKVGIVGLGGIGSMGTLISKAM-GAETYVISRSSRKREDAMKM----GAD-HYI--ATLEEGDWGEKYF-DTFDL 246 (360)
T ss_dssp TCSTTCEEEEECCSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHHH----TCS-EEE--EGGGTSCHHHHSC-SCEEE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHc----CCC-EEE--cCcCchHHHHHhh-cCCCE
Confidence 45678899999986 467777777653 25899999999888888763 111 111 11111 1111122 47999
Q ss_pred EEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEec
Q psy1107 154 ATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 154 i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~ 190 (218)
|+...... + ...+..+.+.|+++|.++....
T Consensus 247 vid~~g~~--~----~~~~~~~~~~l~~~G~iv~~g~ 277 (360)
T 1piw_A 247 IVVCASSL--T----DIDFNIMPKAMKVGGRIVSISI 277 (360)
T ss_dssp EEECCSCS--T----TCCTTTGGGGEEEEEEEEECCC
T ss_pred EEECCCCC--c----HHHHHHHHHHhcCCCEEEEecC
Confidence 98643210 0 1234556789999999887653
No 398
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=87.99 E-value=0.93 Score=35.40 Aligned_cols=99 Identities=12% Similarity=0.064 Sum_probs=62.7
Q ss_pred hcCCCcEEEEec-C-CCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCccc----ccCCCCC
Q psy1107 76 QDVGEGVLLEVG-C-GVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDI----LNQVPHN 149 (218)
Q Consensus 76 ~~~~~~~vLDiG-c-G~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~----~~~~~~~ 149 (218)
...++.+||-.| + |.|..+..+++.. .+++++++.++..++.++.. +.. ..+ |..+.+. .......
T Consensus 137 ~~~~g~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~----Ga~-~~~--~~~~~~~~~~~~~~~~~~ 208 (325)
T 3jyn_A 137 QVKPGEIILFHAAAGGVGSLACQWAKAL-GAKLIGTVSSPEKAAHAKAL----GAW-ETI--DYSHEDVAKRVLELTDGK 208 (325)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHHH----TCS-EEE--ETTTSCHHHHHHHHTTTC
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc----CCC-EEE--eCCCccHHHHHHHHhCCC
Confidence 356788999998 3 3677777777653 35999999999998888754 111 111 2222111 1112234
Q ss_pred cccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 150 SVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 150 ~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
.+|+|+.. .. . ..+..+.+.|+++|.+++....
T Consensus 209 g~Dvvid~-----~g--~--~~~~~~~~~l~~~G~iv~~g~~ 241 (325)
T 3jyn_A 209 KCPVVYDG-----VG--Q--DTWLTSLDSVAPRGLVVSFGNA 241 (325)
T ss_dssp CEEEEEES-----SC--G--GGHHHHHTTEEEEEEEEECCCT
T ss_pred CceEEEEC-----CC--h--HHHHHHHHHhcCCCEEEEEecC
Confidence 69998853 21 1 3566788999999999986543
No 399
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=87.93 E-value=1.3 Score=36.46 Aligned_cols=97 Identities=13% Similarity=0.108 Sum_probs=61.9
Q ss_pred hcCCCcEEEEecC-C-CchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcc------------
Q psy1107 76 QDVGEGVLLEVGC-G-VGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDD------------ 141 (218)
Q Consensus 76 ~~~~~~~vLDiGc-G-~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~------------ 141 (218)
...++.+||=+|+ | .|..+.++++.. .+++++++.++..++.++..-. . .++ |....+
T Consensus 225 ~~~~g~~VlV~GasG~vG~~avqlak~~-Ga~vi~~~~~~~~~~~~~~lGa----~-~vi--~~~~~d~~~~~~~~~~~~ 296 (456)
T 3krt_A 225 GMKQGDNVLIWGASGGLGSYATQFALAG-GANPICVVSSPQKAEICRAMGA----E-AII--DRNAEGYRFWKDENTQDP 296 (456)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHTC----C-EEE--ETTTTTCCSEEETTEECH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHc-CCeEEEEECCHHHHHHHHhhCC----c-EEE--ecCcCcccccccccccch
Confidence 3467889999997 4 677788887654 3688999999999998876411 1 111 111100
Q ss_pred ---------cccCCCCCcccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 142 ---------ILNQVPHNSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 142 ---------~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
+........+|+|+.. .. . ..+..+.++|+++|.+++..
T Consensus 297 ~~~~~~~~~i~~~t~g~g~Dvvid~-----~G--~--~~~~~~~~~l~~~G~iv~~G 344 (456)
T 3krt_A 297 KEWKRFGKRIRELTGGEDIDIVFEH-----PG--R--ETFGASVFVTRKGGTITTCA 344 (456)
T ss_dssp HHHHHHHHHHHHHHTSCCEEEEEEC-----SC--H--HHHHHHHHHEEEEEEEEESC
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEc-----CC--c--hhHHHHHHHhhCCcEEEEEe
Confidence 0001122378988842 21 1 46788889999999998854
No 400
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=87.80 E-value=0.55 Score=37.05 Aligned_cols=99 Identities=17% Similarity=0.127 Sum_probs=61.2
Q ss_pred hcCCCcEEEEecC--CCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCc--ccccCCCCCcc
Q psy1107 76 QDVGEGVLLEVGC--GVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTED--DILNQVPHNSV 151 (218)
Q Consensus 76 ~~~~~~~vLDiGc--G~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~~~~~~ 151 (218)
...++.+||-.|+ |.|..+..+++.. .+++++++.++..++.+++. +. ..++..+ .+. .+........+
T Consensus 156 ~~~~g~~VlV~Gasg~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~----ga-~~v~~~~-~~~~~~v~~~~~~~g~ 228 (342)
T 4eye_A 156 QLRAGETVLVLGAAGGIGTAAIQIAKGM-GAKVIAVVNRTAATEFVKSV----GA-DIVLPLE-EGWAKAVREATGGAGV 228 (342)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHH----TC-SEEEESS-TTHHHHHHHHTTTSCE
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhc----CC-cEEecCc-hhHHHHHHHHhCCCCc
Confidence 3467889999997 3677777777653 35999999999888888764 11 1122111 110 01111222369
Q ss_pred cEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEec
Q psy1107 152 DIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 152 D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~ 190 (218)
|+|+..... ..+..+.+.|+++|.+++...
T Consensus 229 Dvvid~~g~---------~~~~~~~~~l~~~G~iv~~G~ 258 (342)
T 4eye_A 229 DMVVDPIGG---------PAFDDAVRTLASEGRLLVVGF 258 (342)
T ss_dssp EEEEESCC-----------CHHHHHHTEEEEEEEEEC--
T ss_pred eEEEECCch---------hHHHHHHHhhcCCCEEEEEEc
Confidence 999853211 246778889999999998653
No 401
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=87.77 E-value=1.4 Score=34.45 Aligned_cols=96 Identities=14% Similarity=0.196 Sum_probs=58.4
Q ss_pred CCCc-EEEEecC--CCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCc--ccccCCCCCccc
Q psy1107 78 VGEG-VLLEVGC--GVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTED--DILNQVPHNSVD 152 (218)
Q Consensus 78 ~~~~-~vLDiGc--G~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~~~~~~D 152 (218)
.++. +||-.|+ |.|..+.++++.. .+++++++.++..++.++..-. . .++ |..+. ..........+|
T Consensus 147 ~~g~~~VlV~Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~lGa----~-~~i--~~~~~~~~~~~~~~~~~~d 218 (328)
T 1xa0_A 147 TPERGPVLVTGATGGVGSLAVSMLAKR-GYTVEASTGKAAEHDYLRVLGA----K-EVL--AREDVMAERIRPLDKQRWA 218 (328)
T ss_dssp CGGGCCEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCTTCHHHHHHTTC----S-EEE--ECC---------CCSCCEE
T ss_pred CCCCceEEEecCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHcCC----c-EEE--ecCCcHHHHHHHhcCCccc
Confidence 4454 7999997 4677788887653 3589999999888888876411 1 111 11111 111122234689
Q ss_pred EEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEec
Q psy1107 153 IATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 153 ~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~ 190 (218)
+|+... . . ..+..+.+.|+++|.+++...
T Consensus 219 ~vid~~-----g--~--~~~~~~~~~l~~~G~~v~~G~ 247 (328)
T 1xa0_A 219 AAVDPV-----G--G--RTLATVLSRMRYGGAVAVSGL 247 (328)
T ss_dssp EEEECS-----T--T--TTHHHHHHTEEEEEEEEECSC
T ss_pred EEEECC-----c--H--HHHHHHHHhhccCCEEEEEee
Confidence 888532 1 1 246677889999999988643
No 402
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=87.77 E-value=2.2 Score=32.04 Aligned_cols=80 Identities=16% Similarity=0.160 Sum_probs=50.1
Q ss_pred CCcEEEEecC-CCc---hhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcc-cCCCceEEeccCCCcccccC-CC-----
Q psy1107 79 GEGVLLEVGC-GVG---NFIFPLLSWSKICYIHACDISPRAVNFFKLNPLY-DASKMNVFPCDVTEDDILNQ-VP----- 147 (218)
Q Consensus 79 ~~~~vLDiGc-G~G---~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~-~~~~i~~~~~d~~~~~~~~~-~~----- 147 (218)
.++++|=.|+ |.| ..+..+++.+ .+|+.++.+...++.+...... .+.++.++.+|+.+.+-... +.
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 98 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEG--ADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEK 98 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCC--CEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence 4668888887 554 2344555555 5899999988776655544322 23578999999987532111 00
Q ss_pred CCcccEEEechhh
Q psy1107 148 HNSVDIATLIFVL 160 (218)
Q Consensus 148 ~~~~D~i~~~~~l 160 (218)
-+..|+++.+..+
T Consensus 99 ~g~id~li~~Ag~ 111 (266)
T 3o38_A 99 AGRLDVLVNNAGL 111 (266)
T ss_dssp HSCCCEEEECCCC
T ss_pred hCCCcEEEECCCc
Confidence 1367998886543
No 403
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=87.73 E-value=0.63 Score=34.75 Aligned_cols=79 Identities=15% Similarity=0.147 Sum_probs=50.1
Q ss_pred CCcEEEEecCCCc---hhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCC-C-----CC
Q psy1107 79 GEGVLLEVGCGVG---NFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQV-P-----HN 149 (218)
Q Consensus 79 ~~~~vLDiGcG~G---~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~-~-----~~ 149 (218)
.++++|=.|++.| ..+..+++.+ .+|+.++.++...+.+.......+.++.++.+|+.+..-...+ . -+
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 85 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALAREG--AAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFG 85 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4567887887654 3344444444 5899999998877666554443446788999999885321110 0 13
Q ss_pred cccEEEechh
Q psy1107 150 SVDIATLIFV 159 (218)
Q Consensus 150 ~~D~i~~~~~ 159 (218)
..|+++.+..
T Consensus 86 ~id~li~~Ag 95 (253)
T 3qiv_A 86 GIDYLVNNAA 95 (253)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 6899888653
No 404
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=87.51 E-value=1.7 Score=33.12 Aligned_cols=80 Identities=13% Similarity=0.026 Sum_probs=47.1
Q ss_pred CCcEEEEecCCCc---hhHHHHhhcCCccEEEEEeC-CHHHHHHHHhCCcccCCCceEEeccCCCcccccC-CC-----C
Q psy1107 79 GEGVLLEVGCGVG---NFIFPLLSWSKICYIHACDI-SPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQ-VP-----H 148 (218)
Q Consensus 79 ~~~~vLDiGcG~G---~~~~~~~~~~~~~~v~~~D~-s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~-~~-----~ 148 (218)
.++++|=.|++.| ..+..+++.+ .+|+.++. ++...+.........+.++.++.+|+.+.+-... +. -
T Consensus 28 ~~k~~lVTGas~GIG~aia~~la~~G--~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 105 (280)
T 4da9_A 28 ARPVAIVTGGRRGIGLGIARALAASG--FDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEF 105 (280)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHH
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCC--CeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 4567787777655 2344444444 58888885 5555544443333334678999999988542111 10 1
Q ss_pred CcccEEEechhh
Q psy1107 149 NSVDIATLIFVL 160 (218)
Q Consensus 149 ~~~D~i~~~~~l 160 (218)
+..|+++.+..+
T Consensus 106 g~iD~lvnnAg~ 117 (280)
T 4da9_A 106 GRIDCLVNNAGI 117 (280)
T ss_dssp SCCCEEEEECC-
T ss_pred CCCCEEEECCCc
Confidence 368998886543
No 405
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=87.35 E-value=0.54 Score=36.32 Aligned_cols=93 Identities=11% Similarity=0.078 Sum_probs=59.8
Q ss_pred cCCCcEEEEecC--CCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCC-cccccCCCCCcccE
Q psy1107 77 DVGEGVLLEVGC--GVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTE-DDILNQVPHNSVDI 153 (218)
Q Consensus 77 ~~~~~~vLDiGc--G~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~-~~~~~~~~~~~~D~ 153 (218)
..++.+||-.|+ |.|..+..++... .+++++++.++..++.++..- .. .. .|..+ .+..... ..+|+
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~g----a~-~~--~~~~~~~~~~~~~--~~~d~ 192 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAM-GLRVLAAASRPEKLALPLALG----AE-EA--ATYAEVPERAKAW--GGLDL 192 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSGGGSHHHHHTT----CS-EE--EEGGGHHHHHHHT--TSEEE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhcC----CC-EE--EECCcchhHHHHh--cCceE
Confidence 567889999998 3677777777653 359999999998888886541 11 11 12221 1111112 36899
Q ss_pred EEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 154 ATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 154 i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
|+. .. . ..+..+.+.|+++|.++...
T Consensus 193 vid-~g-------~--~~~~~~~~~l~~~G~~v~~g 218 (302)
T 1iz0_A 193 VLE-VR-------G--KEVEESLGLLAHGGRLVYIG 218 (302)
T ss_dssp EEE-CS-------C--TTHHHHHTTEEEEEEEEEC-
T ss_pred EEE-CC-------H--HHHHHHHHhhccCCEEEEEe
Confidence 885 21 1 24677888999999988754
No 406
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=87.33 E-value=2.6 Score=33.04 Aligned_cols=97 Identities=8% Similarity=-0.084 Sum_probs=60.3
Q ss_pred CcEEEEecCCCchhHHHHhhcC--CccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEec
Q psy1107 80 EGVLLEVGCGVGNFIFPLLSWS--KICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATLI 157 (218)
Q Consensus 80 ~~~vLDiGcG~G~~~~~~~~~~--~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~~ 157 (218)
..+++=+|+ |..+..+++.. .+. ++++|.+++.++ ++. ..+.++.+|..+.+......-...|.+++.
T Consensus 115 ~~~viI~G~--G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~------~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~ 184 (336)
T 1lnq_A 115 SRHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKK-VLR------SGANFVHGDPTRVSDLEKANVRGARAVIVD 184 (336)
T ss_dssp -CEEEEESC--CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH------TTCEEEESCTTSHHHHHHTCSTTEEEEEEC
T ss_pred cCCEEEECC--cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh------CCcEEEEeCCCCHHHHHhcChhhccEEEEc
Confidence 346877776 45555555432 234 999999999888 654 257889999988654433333468888763
Q ss_pred hhhcCCCcchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 158 FVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 158 ~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
.+.+......-...+.+.|...++.....
T Consensus 185 -----~~~d~~n~~~~~~ar~~~~~~~iiar~~~ 213 (336)
T 1lnq_A 185 -----LESDSETIHCILGIRKIDESVRIIAEAER 213 (336)
T ss_dssp -----CSSHHHHHHHHHHHHTTCTTSEEEEECSS
T ss_pred -----CCccHHHHHHHHHHHHHCCCCeEEEEECC
Confidence 22233334444556677787777775533
No 407
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=87.17 E-value=0.85 Score=34.43 Aligned_cols=109 Identities=14% Similarity=0.083 Sum_probs=58.4
Q ss_pred CCcEEEEecCCCc---hhHHHHhhcCCccEEEEEeCCH---HHHHHHHhCCcccCCCceEEeccCCCcccccCC-C----
Q psy1107 79 GEGVLLEVGCGVG---NFIFPLLSWSKICYIHACDISP---RAVNFFKLNPLYDASKMNVFPCDVTEDDILNQV-P---- 147 (218)
Q Consensus 79 ~~~~vLDiGcG~G---~~~~~~~~~~~~~~v~~~D~s~---~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~-~---- 147 (218)
.++++|=.|++.| ..+..+++.+ .+|+.++.+. ..++.+.......+.++.++.+|+.+.+-...+ .
T Consensus 10 ~~k~vlVTGas~GIG~aia~~la~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 87 (262)
T 3ksu_A 10 KNKVIVIAGGIKNLGALTAKTFALES--VNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEK 87 (262)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHTTSS--CEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCC--CEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 4567887777655 2233344444 5788876543 333333332222345788999999875321111 0
Q ss_pred -CCcccEEEechhhcC------CCcchHH-----------HHHHHHHHhccCCeEEEEEe
Q psy1107 148 -HNSVDIATLIFVLSA------IHPNKFS-----------TVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 148 -~~~~D~i~~~~~l~~------~~~~~~~-----------~~l~~~~~~Lk~gG~li~~~ 189 (218)
-+..|+++.+..+.. .+++++. .+.+.+...++++|.++...
T Consensus 88 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~is 147 (262)
T 3ksu_A 88 EFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIA 147 (262)
T ss_dssp HHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEEC
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEe
Confidence 146899887654322 2223333 23344455566778777654
No 408
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=87.17 E-value=2.3 Score=32.01 Aligned_cols=75 Identities=11% Similarity=0.081 Sum_probs=47.3
Q ss_pred CCcEEEEecCCCc---hhHHHHhhcCCccEEEEEeCCH--HHHHHHHhCCcccCCCceEEeccCCCcccc-cCCCCCccc
Q psy1107 79 GEGVLLEVGCGVG---NFIFPLLSWSKICYIHACDISP--RAVNFFKLNPLYDASKMNVFPCDVTEDDIL-NQVPHNSVD 152 (218)
Q Consensus 79 ~~~~vLDiGcG~G---~~~~~~~~~~~~~~v~~~D~s~--~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~-~~~~~~~~D 152 (218)
.++++|=-|.+.| ..+..+++.+ ++|+..|.+. +..+.... .+.+..++.+|+.+..-. ..+..+..|
T Consensus 8 ~GKvalVTGas~GIG~aiA~~la~~G--a~Vvi~~r~~~~~~~~~~~~----~g~~~~~~~~Dv~d~~~v~~~~~~g~iD 81 (247)
T 4hp8_A 8 EGRKALVTGANTGLGQAIAVGLAAAG--AEVVCAARRAPDETLDIIAK----DGGNASALLIDFADPLAAKDSFTDAGFD 81 (247)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTT--CEEEEEESSCCHHHHHHHHH----TTCCEEEEECCTTSTTTTTTSSTTTCCC
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHcC--CEEEEEeCCcHHHHHHHHHH----hCCcEEEEEccCCCHHHHHHHHHhCCCC
Confidence 4667777777666 2344555555 5888888764 33333332 346788999999886432 224456899
Q ss_pred EEEechh
Q psy1107 153 IATLIFV 159 (218)
Q Consensus 153 ~i~~~~~ 159 (218)
+++.+..
T Consensus 82 iLVNNAG 88 (247)
T 4hp8_A 82 ILVNNAG 88 (247)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 9988553
No 409
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=87.13 E-value=1.1 Score=34.21 Aligned_cols=79 Identities=13% Similarity=0.098 Sum_probs=47.9
Q ss_pred CCcEEEEecCCCc---hhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCC-----CCCc
Q psy1107 79 GEGVLLEVGCGVG---NFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQV-----PHNS 150 (218)
Q Consensus 79 ~~~~vLDiGcG~G---~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~-----~~~~ 150 (218)
.++++|=.|++.| ..+..+++.+ .+|+.++.++...+.+.......+.++.++.+|+.+......+ ..+.
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~ 109 (275)
T 4imr_A 32 RGRTALVTGSSRGIGAAIAEGLAGAG--AHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAP 109 (275)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTT--CEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 4667787776554 2333444444 5899999887665554443333356788999999875321110 0146
Q ss_pred ccEEEechh
Q psy1107 151 VDIATLIFV 159 (218)
Q Consensus 151 ~D~i~~~~~ 159 (218)
.|+++.+..
T Consensus 110 iD~lvnnAg 118 (275)
T 4imr_A 110 VDILVINAS 118 (275)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 899888654
No 410
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=86.95 E-value=1.8 Score=33.28 Aligned_cols=108 Identities=13% Similarity=0.113 Sum_probs=61.5
Q ss_pred CCcEEEEecCCC-ch----hHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccC-CC-----
Q psy1107 79 GEGVLLEVGCGV-GN----FIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQ-VP----- 147 (218)
Q Consensus 79 ~~~~vLDiGcG~-G~----~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~-~~----- 147 (218)
.++++|=.|++. .. .+..+++.+ .+|+.++.+....+.+....... ..+.++.+|+.+.+-... +.
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G--~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~ 105 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQG--AEVALTYLSETFKKRVDPLAESL-GVKLTVPCDVSDAESVDNMFKVLAEE 105 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTT--CEEEEEESSGGGHHHHHHHHHHH-TCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCC--CEEEEEeCChHHHHHHHHHHHhc-CCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 456888888754 23 344444544 58999998875544443332222 346788999988532111 00
Q ss_pred CCcccEEEechhhc----------CCCcchHH-----------HHHHHHHHhccCCeEEEEEe
Q psy1107 148 HNSVDIATLIFVLS----------AIHPNKFS-----------TVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 148 ~~~~D~i~~~~~l~----------~~~~~~~~-----------~~l~~~~~~Lk~gG~li~~~ 189 (218)
-+..|+++.+..+. ..+.+++. .+++.+...++.+|.++...
T Consensus 106 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~is 168 (296)
T 3k31_A 106 WGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLS 168 (296)
T ss_dssp HSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred cCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEE
Confidence 14689998865432 12223333 23344566667788887754
No 411
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=86.75 E-value=0.42 Score=32.43 Aligned_cols=44 Identities=9% Similarity=0.009 Sum_probs=30.8
Q ss_pred cCCCCCcccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEE
Q psy1107 144 NQVPHNSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILF 187 (218)
Q Consensus 144 ~~~~~~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~ 187 (218)
-.++...||.|+....-..-...-...++..+...|||||.|..
T Consensus 53 VsLp~stYD~V~~lt~~~~~~~~l~r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 53 ITLENAKYETVHYLTPEAQTDIKFPKKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp CCCCSSSCCSEEEECCCSSCSCCCCHHHHHHHHTTCCTTCCEEC
T ss_pred ccCCcccccEEEEecCCccchhhcCHHHHHHHHHHhCCCCEEEe
Confidence 35677899999874322211012247899999999999999886
No 412
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=86.54 E-value=1.5 Score=33.13 Aligned_cols=79 Identities=9% Similarity=0.016 Sum_probs=48.3
Q ss_pred CCcEEEEecCCCc---hhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcc-cCCCceEEeccCCCcccccCC------CC
Q psy1107 79 GEGVLLEVGCGVG---NFIFPLLSWSKICYIHACDISPRAVNFFKLNPLY-DASKMNVFPCDVTEDDILNQV------PH 148 (218)
Q Consensus 79 ~~~~vLDiGcG~G---~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~-~~~~i~~~~~d~~~~~~~~~~------~~ 148 (218)
.++++|=.|++.| ..+..+++.+ .+|+.++-+...++.+...... .+.++.++.+|+.+.+-...+ .-
T Consensus 19 ~~k~vlVTGas~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 96 (266)
T 4egf_A 19 DGKRALITGATKGIGADIARAFAAAG--ARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAF 96 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 4567777776654 2333444444 5899999988776655443322 346789999999885421110 01
Q ss_pred CcccEEEechh
Q psy1107 149 NSVDIATLIFV 159 (218)
Q Consensus 149 ~~~D~i~~~~~ 159 (218)
+..|+++.+..
T Consensus 97 g~id~lv~nAg 107 (266)
T 4egf_A 97 GGLDVLVNNAG 107 (266)
T ss_dssp TSCSEEEEECC
T ss_pred CCCCEEEECCC
Confidence 36898887654
No 413
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=86.49 E-value=0.63 Score=36.75 Aligned_cols=99 Identities=11% Similarity=0.115 Sum_probs=61.7
Q ss_pred hcCCCcEEEEecC--CCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCC-ccccc---CCCCC
Q psy1107 76 QDVGEGVLLEVGC--GVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTE-DDILN---QVPHN 149 (218)
Q Consensus 76 ~~~~~~~vLDiGc--G~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~-~~~~~---~~~~~ 149 (218)
...++.+||-.|+ |.|..+..++... ..++++++.++...+.++.. +.. .. .|..+ .++.. ....+
T Consensus 166 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~V~~~~~~~~~~~~~~~~----g~~-~~--~d~~~~~~~~~~~~~~~~~ 237 (347)
T 2hcy_A 166 NLMAGHWVAISGAAGGLGSLAVQYAKAM-GYRVLGIDGGEGKEELFRSI----GGE-VF--IDFTKEKDIVGAVLKATDG 237 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECSTTHHHHHHHT----TCC-EE--EETTTCSCHHHHHHHHHTS
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHC-CCcEEEEcCCHHHHHHHHHc----CCc-eE--EecCccHhHHHHHHHHhCC
Confidence 3457789999998 3667776666543 35899999888888877654 111 11 24331 11110 11112
Q ss_pred cccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEec
Q psy1107 150 SVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 150 ~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~ 190 (218)
.+|+++.... ....+..+.+.|+++|.+++...
T Consensus 238 ~~D~vi~~~g--------~~~~~~~~~~~l~~~G~iv~~g~ 270 (347)
T 2hcy_A 238 GAHGVINVSV--------SEAAIEASTRYVRANGTTVLVGM 270 (347)
T ss_dssp CEEEEEECSS--------CHHHHHHHTTSEEEEEEEEECCC
T ss_pred CCCEEEECCC--------cHHHHHHHHHHHhcCCEEEEEeC
Confidence 6899885321 12467888899999999888654
No 414
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=86.34 E-value=1.8 Score=32.58 Aligned_cols=79 Identities=18% Similarity=0.142 Sum_probs=46.5
Q ss_pred CCcEEEEecCCCc---hhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCccc--CCCceEEeccCCCcccccC-CC-----
Q psy1107 79 GEGVLLEVGCGVG---NFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYD--ASKMNVFPCDVTEDDILNQ-VP----- 147 (218)
Q Consensus 79 ~~~~vLDiGcG~G---~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~--~~~i~~~~~d~~~~~~~~~-~~----- 147 (218)
.++++|=.|++.| ..+..+++.+ .+|++++.++...+.+....... +.++.++.+|+.+.+-... +.
T Consensus 12 ~~k~vlVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 89 (267)
T 1iy8_A 12 TDRVVLITGGGSGLGRATAVRLAAEG--AKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER 89 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 3567887776554 2333444444 58999999887665443322211 3568888999987532111 10
Q ss_pred CCcccEEEechh
Q psy1107 148 HNSVDIATLIFV 159 (218)
Q Consensus 148 ~~~~D~i~~~~~ 159 (218)
-+.+|+++.+..
T Consensus 90 ~g~id~lv~nAg 101 (267)
T 1iy8_A 90 FGRIDGFFNNAG 101 (267)
T ss_dssp HSCCSEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 135798888654
No 415
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=86.18 E-value=2.8 Score=31.77 Aligned_cols=109 Identities=11% Similarity=0.069 Sum_probs=60.9
Q ss_pred CCcEEEEecCCCc---hhHHHHhhcCCccEEEEEeCC-HHHHHHHHhCCcccCCCceEEeccCCCcccccC-CC-----C
Q psy1107 79 GEGVLLEVGCGVG---NFIFPLLSWSKICYIHACDIS-PRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQ-VP-----H 148 (218)
Q Consensus 79 ~~~~vLDiGcG~G---~~~~~~~~~~~~~~v~~~D~s-~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~-~~-----~ 148 (218)
.++++|=.|++.| ..+..+++.+ .+|+.++.+ ....+.........+.++.++.+|+.+.+-... +. -
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G--~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (271)
T 3v2g_A 30 AGKTAFVTGGSRGIGAAIAKRLALEG--AAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEAL 107 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCC--CEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 5678888887665 2344444444 578887554 343333333223334678899999987532111 00 1
Q ss_pred CcccEEEechhhcC------CCcchHH-----------HHHHHHHHhccCCeEEEEEe
Q psy1107 149 NSVDIATLIFVLSA------IHPNKFS-----------TVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 149 ~~~D~i~~~~~l~~------~~~~~~~-----------~~l~~~~~~Lk~gG~li~~~ 189 (218)
+..|+++.+..+.. .+++++. .+++.+.+.++++|.++...
T Consensus 108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~is 165 (271)
T 3v2g_A 108 GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIG 165 (271)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 36899888654322 2223333 33455567777788777654
No 416
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=86.04 E-value=3.2 Score=37.84 Aligned_cols=83 Identities=17% Similarity=0.087 Sum_probs=54.3
Q ss_pred CCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCc-------cc----ccCC
Q psy1107 78 VGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTED-------DI----LNQV 146 (218)
Q Consensus 78 ~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~-------~~----~~~~ 146 (218)
.+..+++|+.||.|.++.-+...+-.-.+.++|+++.+.+..+.+.. +..++..|+.+. ++ ...+
T Consensus 538 ~~~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N~p----~~~~~~~DI~~l~~~~~~~di~~~~~~~l 613 (1002)
T 3swr_A 538 LPKLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNP----GSTVFTEDCNILLKLVMAGETTNSRGQRL 613 (1002)
T ss_dssp CCCEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHHCT----TSEEECSCHHHHHHHHHHTCSBCTTCCBC
T ss_pred CCCCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCC----CCccccccHHHHhhhccchhhhhhhhhhc
Confidence 35679999999999999888777631268899999999988877643 334444443210 00 0112
Q ss_pred C-CCcccEEEechhhcCCC
Q psy1107 147 P-HNSVDIATLIFVLSAIH 164 (218)
Q Consensus 147 ~-~~~~D~i~~~~~l~~~~ 164 (218)
+ .+.+|+|+....-..++
T Consensus 614 p~~~~vDll~GGpPCQ~FS 632 (1002)
T 3swr_A 614 PQKGDVEMLCGGPPCQGFS 632 (1002)
T ss_dssp CCTTTCSEEEECCCCTTCC
T ss_pred ccCCCeeEEEEcCCCcchh
Confidence 2 34789999866544443
No 417
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=85.96 E-value=0.54 Score=35.72 Aligned_cols=48 Identities=21% Similarity=0.390 Sum_probs=31.8
Q ss_pred CcccEEEechh----hcCCCc-ch----HHHHHHHHHHhccCCeEEEEEecCCCchh
Q psy1107 149 NSVDIATLIFV----LSAIHP-NK----FSTVVKNLFIMLKSGGIILFRDYGLHDMA 196 (218)
Q Consensus 149 ~~~D~i~~~~~----l~~~~~-~~----~~~~l~~~~~~Lk~gG~li~~~~~~~~~~ 196 (218)
++||+|+++.- .||... +| ...+-..+.+.|+|||.+++..|+..|-.
T Consensus 210 grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~aYGyADR~ 266 (324)
T 3trk_A 210 GRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAYGYADRT 266 (324)
T ss_dssp CCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEECCCCSHH
T ss_pred CceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEeecccccc
Confidence 68999998542 122210 01 12333566789999999999999988754
No 418
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=85.50 E-value=2.8 Score=31.30 Aligned_cols=76 Identities=13% Similarity=-0.008 Sum_probs=45.5
Q ss_pred CCcEEEEecCCCc---hhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccC-CC-----CC
Q psy1107 79 GEGVLLEVGCGVG---NFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQ-VP-----HN 149 (218)
Q Consensus 79 ~~~~vLDiGcG~G---~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~-~~-----~~ 149 (218)
.++++|=.|++.| ..+..+++.+ .+|+.++.++...+...... +.++.++.+|+.+.+-... +. -+
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 78 (254)
T 1hdc_A 4 SGKTVIITGGARGLGAEAARQAVAAG--ARVVLADVLDEEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEFG 78 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHh---CCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 3467777776544 2233344444 58999999887766554443 2467888899887532111 10 13
Q ss_pred cccEEEechh
Q psy1107 150 SVDIATLIFV 159 (218)
Q Consensus 150 ~~D~i~~~~~ 159 (218)
..|+++.+..
T Consensus 79 ~iD~lv~nAg 88 (254)
T 1hdc_A 79 SVDGLVNNAG 88 (254)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 6898887654
No 419
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=85.43 E-value=3 Score=31.73 Aligned_cols=77 Identities=18% Similarity=0.188 Sum_probs=48.0
Q ss_pred CCcEEEEecCCCc---hhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccC-CC-----CC
Q psy1107 79 GEGVLLEVGCGVG---NFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQ-VP-----HN 149 (218)
Q Consensus 79 ~~~~vLDiGcG~G---~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~-~~-----~~ 149 (218)
.++++|=.|++.| ..+..+++.+ .+|+++|.++...+.+.... +.++.++.+|+.+.+-... +. -+
T Consensus 28 ~gk~vlVTGas~gIG~aia~~la~~G--~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 102 (277)
T 3gvc_A 28 AGKVAIVTGAGAGIGLAVARRLADEG--CHVLCADIDGDAADAAATKI---GCGAAACRVDVSDEQQIIAMVDACVAAFG 102 (277)
T ss_dssp TTCEEEETTTTSTHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHHHH---CSSCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHc---CCcceEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4567787777655 2344444444 58999999887766554432 4578889999987532111 00 13
Q ss_pred cccEEEechhh
Q psy1107 150 SVDIATLIFVL 160 (218)
Q Consensus 150 ~~D~i~~~~~l 160 (218)
..|+++.+..+
T Consensus 103 ~iD~lvnnAg~ 113 (277)
T 3gvc_A 103 GVDKLVANAGV 113 (277)
T ss_dssp SCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68998876543
No 420
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=85.41 E-value=0.51 Score=38.65 Aligned_cols=43 Identities=19% Similarity=0.156 Sum_probs=31.7
Q ss_pred CcEEEEecCCCchhHHHHhhcC----C-ccEEEEEeCCHHHHHHHHhC
Q psy1107 80 EGVLLEVGCGVGNFIFPLLSWS----K-ICYIHACDISPRAVNFFKLN 122 (218)
Q Consensus 80 ~~~vLDiGcG~G~~~~~~~~~~----~-~~~v~~~D~s~~~~~~~~~~ 122 (218)
..+|+|+|.|+|.++..++... + ..++..+|+|+...+.-++.
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~ 185 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRET 185 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHH
Confidence 5799999999999887776431 1 23899999999765544443
No 421
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=85.39 E-value=1.5 Score=33.19 Aligned_cols=109 Identities=15% Similarity=0.083 Sum_probs=59.7
Q ss_pred CCcEEEEecCCCc---hhHHHHhhcCCccEEEEEe-CCHHHHHHHHhCCcccCCCceEEeccCCCcccccCC-C-----C
Q psy1107 79 GEGVLLEVGCGVG---NFIFPLLSWSKICYIHACD-ISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQV-P-----H 148 (218)
Q Consensus 79 ~~~~vLDiGcG~G---~~~~~~~~~~~~~~v~~~D-~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~-~-----~ 148 (218)
.++++|=.|++.| ..+..+++.+ .+++..+ -+....+.........+.++.++.+|+.+.+-...+ . -
T Consensus 26 ~~k~~lVTGas~GIG~aia~~la~~G--~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 103 (267)
T 3u5t_A 26 TNKVAIVTGASRGIGAAIAARLASDG--FTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAF 103 (267)
T ss_dssp -CCEEEEESCSSHHHHHHHHHHHHHT--CEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCC--CEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4567887877665 2344455555 4777663 344444433333233345788999999875321111 0 1
Q ss_pred CcccEEEechhhcCC------CcchHH-----------HHHHHHHHhccCCeEEEEEe
Q psy1107 149 NSVDIATLIFVLSAI------HPNKFS-----------TVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 149 ~~~D~i~~~~~l~~~------~~~~~~-----------~~l~~~~~~Lk~gG~li~~~ 189 (218)
+..|+++.+..+... +++++. .+++.+.+.++++|.++...
T Consensus 104 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 161 (267)
T 3u5t_A 104 GGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMS 161 (267)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 368998886543322 222232 23445566677788877754
No 422
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=85.26 E-value=6 Score=25.95 Aligned_cols=98 Identities=14% Similarity=0.018 Sum_probs=51.9
Q ss_pred CcEEEEecCCCchhHHHHhhcC--CccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEec
Q psy1107 80 EGVLLEVGCGVGNFIFPLLSWS--KICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATLI 157 (218)
Q Consensus 80 ~~~vLDiGcG~G~~~~~~~~~~--~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~~ 157 (218)
..+|+=+|+| ..+..++... ...+++++|.++..++.+.... .+.++.+|..+........-..+|+|+..
T Consensus 4 ~m~i~IiG~G--~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~-----~~~~~~~d~~~~~~l~~~~~~~~d~vi~~ 76 (140)
T 1lss_A 4 GMYIIIAGIG--RVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI-----DALVINGDCTKIKTLEDAGIEDADMYIAV 76 (140)
T ss_dssp -CEEEEECCS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-----SSEEEESCTTSHHHHHHTTTTTCSEEEEC
T ss_pred CCEEEEECCC--HHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhc-----CcEEEEcCCCCHHHHHHcCcccCCEEEEe
Confidence 3578888875 4444443221 1258999999988776665321 24455666654322111112358988864
Q ss_pred hhhcCCCcchHHHHHHHHHHhccCCeEEEEEec
Q psy1107 158 FVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 158 ~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~ 190 (218)
.+.......+..+.+.+.++ .+++...
T Consensus 77 -----~~~~~~~~~~~~~~~~~~~~-~ii~~~~ 103 (140)
T 1lss_A 77 -----TGKEEVNLMSSLLAKSYGIN-KTIARIS 103 (140)
T ss_dssp -----CSCHHHHHHHHHHHHHTTCC-CEEEECS
T ss_pred -----eCCchHHHHHHHHHHHcCCC-EEEEEec
Confidence 22223334444555667775 4555443
No 423
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=85.17 E-value=1.2 Score=34.82 Aligned_cols=97 Identities=19% Similarity=0.223 Sum_probs=59.2
Q ss_pred CCCc-EEEEecC--CCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEe-ccCCCcccccCCCCCcccE
Q psy1107 78 VGEG-VLLEVGC--GVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFP-CDVTEDDILNQVPHNSVDI 153 (218)
Q Consensus 78 ~~~~-~vLDiGc--G~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~-~d~~~~~~~~~~~~~~~D~ 153 (218)
.++. +||-.|+ |.|..+.++++.. .+++++++.++..++.+++. +.. ..+. .+... ..........+|+
T Consensus 148 ~~g~~~VlV~Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~l----Ga~-~v~~~~~~~~-~~~~~~~~~~~d~ 220 (330)
T 1tt7_A 148 SPEKGSVLVTGATGGVGGIAVSMLNKR-GYDVVASTGNREAADYLKQL----GAS-EVISREDVYD-GTLKALSKQQWQG 220 (330)
T ss_dssp CGGGCCEEEESTTSHHHHHHHHHHHHH-TCCEEEEESSSSTHHHHHHH----TCS-EEEEHHHHCS-SCCCSSCCCCEEE
T ss_pred CCCCceEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc----CCc-EEEECCCchH-HHHHHhhcCCccE
Confidence 4454 8999997 3677777777653 25899999988888887653 111 1111 11100 0111222346898
Q ss_pred EEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEec
Q psy1107 154 ATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 154 i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~ 190 (218)
|+.. .. . ..+..+.+.|+++|.+++...
T Consensus 221 vid~-----~g--~--~~~~~~~~~l~~~G~iv~~G~ 248 (330)
T 1tt7_A 221 AVDP-----VG--G--KQLASLLSKIQYGGSVAVSGL 248 (330)
T ss_dssp EEES-----CC--T--HHHHHHHTTEEEEEEEEECCC
T ss_pred EEEC-----Cc--H--HHHHHHHHhhcCCCEEEEEec
Confidence 8853 22 1 357788899999999988653
No 424
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=85.13 E-value=2.9 Score=31.42 Aligned_cols=72 Identities=17% Similarity=0.177 Sum_probs=46.8
Q ss_pred cEEEEecCCCc---hhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCC------CCCcc
Q psy1107 81 GVLLEVGCGVG---NFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQV------PHNSV 151 (218)
Q Consensus 81 ~~vLDiGcG~G---~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~------~~~~~ 151 (218)
++||=-|++.| ..+..+++.+ ++|+.+|.++...+...+. ..++.++.+|+.+.+-...+ .-++.
T Consensus 3 K~vlVTGas~GIG~aia~~la~~G--a~V~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~i 76 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEAG--DKVCFIDIDEKRSADFAKE----RPNLFYFHGDVADPLTLKKFVEYAMEKLQRI 76 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHTT----CTTEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEecCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHh----cCCEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 46777777766 3344555555 6899999998877665543 34688899999885321110 01578
Q ss_pred cEEEech
Q psy1107 152 DIATLIF 158 (218)
Q Consensus 152 D~i~~~~ 158 (218)
|+++.+.
T Consensus 77 DiLVNNA 83 (247)
T 3ged_A 77 DVLVNNA 83 (247)
T ss_dssp CEEEECC
T ss_pred CEEEECC
Confidence 9888754
No 425
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=85.04 E-value=0.91 Score=31.61 Aligned_cols=55 Identities=18% Similarity=0.154 Sum_probs=40.2
Q ss_pred CCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCC
Q psy1107 79 GEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTE 139 (218)
Q Consensus 79 ~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~ 139 (218)
-..-|||+|-|+|..-..+.+..|+.+|+++|-.- +....-.+..-.++.+|+.+
T Consensus 40 ~~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR~~------~~hp~~~P~~e~~ilGdi~~ 94 (174)
T 3iht_A 40 LSGPVYELGLGNGRTYHHLRQHVQGREIYVFERAV------ASHPDSTPPEAQLILGDIRE 94 (174)
T ss_dssp CCSCEEEECCTTCHHHHHHHHHCCSSCEEEEESSC------CCCGGGCCCGGGEEESCHHH
T ss_pred CCCceEEecCCCChhHHHHHHhCCCCcEEEEEeee------ccCCCCCCchHheecccHHH
Confidence 45789999999999999999999999999999411 11111223456777787765
No 426
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=84.92 E-value=2.3 Score=33.87 Aligned_cols=95 Identities=18% Similarity=0.150 Sum_probs=59.1
Q ss_pred CCCcEEEEecCC--CchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccc---cCCCCCccc
Q psy1107 78 VGEGVLLEVGCG--VGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDIL---NQVPHNSVD 152 (218)
Q Consensus 78 ~~~~~vLDiGcG--~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~---~~~~~~~~D 152 (218)
.++.+||=.|++ .|..+.++++.. .++++++. ++..++.++..-. .+++ |..+.++. .....+.+|
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~-Ga~Vi~~~-~~~~~~~~~~lGa-----~~vi--~~~~~~~~~~v~~~t~g~~d 233 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLS-GYIPIATC-SPHNFDLAKSRGA-----EEVF--DYRAPNLAQTIRTYTKNNLR 233 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEE-CGGGHHHHHHTTC-----SEEE--ETTSTTHHHHHHHHTTTCCC
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHC-CCEEEEEe-CHHHHHHHHHcCC-----cEEE--ECCCchHHHHHHHHccCCcc
Confidence 567899999983 788888888764 35888875 8888888876521 1122 22221111 111223589
Q ss_pred EEEechhhcCCCcchHHHHHHHHHHhc-cCCeEEEEEe
Q psy1107 153 IATLIFVLSAIHPNKFSTVVKNLFIML-KSGGIILFRD 189 (218)
Q Consensus 153 ~i~~~~~l~~~~~~~~~~~l~~~~~~L-k~gG~li~~~ 189 (218)
+|+-. .. -...+..+.+.| +++|.+++..
T Consensus 234 ~v~d~-----~g---~~~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 234 YALDC-----IT---NVESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp EEEES-----SC---SHHHHHHHHHHSCTTCEEEEESS
T ss_pred EEEEC-----CC---chHHHHHHHHHhhcCCCEEEEEe
Confidence 98842 21 124567777888 6999988754
No 427
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=84.62 E-value=1 Score=35.62 Aligned_cols=98 Identities=14% Similarity=0.061 Sum_probs=61.0
Q ss_pred hcCCCcEEEEecC--CCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCccccc---CCCCCc
Q psy1107 76 QDVGEGVLLEVGC--GVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILN---QVPHNS 150 (218)
Q Consensus 76 ~~~~~~~vLDiGc--G~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~---~~~~~~ 150 (218)
...++.+||-.|+ |.|..+..+++.. .++|++++.++..++.+++.- .. .. .|..+.+... ......
T Consensus 164 ~~~~g~~VlV~Gg~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~lG----a~-~~--~~~~~~~~~~~~~~~~~~g 235 (353)
T 4dup_A 164 GLTEGESVLIHGGTSGIGTTAIQLARAF-GAEVYATAGSTGKCEACERLG----AK-RG--INYRSEDFAAVIKAETGQG 235 (353)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHHT----CS-EE--EETTTSCHHHHHHHHHSSC
T ss_pred CCCCCCEEEEEcCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcC----CC-EE--EeCCchHHHHHHHHHhCCC
Confidence 3467889998853 3677777777653 358999999999988887641 11 11 1222211100 011346
Q ss_pred ccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEec
Q psy1107 151 VDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 151 ~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~ 190 (218)
+|+++... .. ..+..+.+.|+++|.+++...
T Consensus 236 ~Dvvid~~-----g~----~~~~~~~~~l~~~G~iv~~g~ 266 (353)
T 4dup_A 236 VDIILDMI-----GA----AYFERNIASLAKDGCLSIIAF 266 (353)
T ss_dssp EEEEEESC-----CG----GGHHHHHHTEEEEEEEEECCC
T ss_pred ceEEEECC-----CH----HHHHHHHHHhccCCEEEEEEe
Confidence 89988532 11 246677889999999888653
No 428
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=84.57 E-value=1.7 Score=34.03 Aligned_cols=98 Identities=10% Similarity=0.071 Sum_probs=61.2
Q ss_pred hcCCCcEEEEecC--CCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCccccc----CCCCC
Q psy1107 76 QDVGEGVLLEVGC--GVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILN----QVPHN 149 (218)
Q Consensus 76 ~~~~~~~vLDiGc--G~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~----~~~~~ 149 (218)
...++.+||-.|+ |.|..+..++... .+++++++.++..++.++.. +.. .. .|..+.+... .....
T Consensus 142 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~~----g~~-~~--~d~~~~~~~~~i~~~~~~~ 213 (333)
T 1wly_A 142 KVKPGDYVLIHAAAGGMGHIMVPWARHL-GATVIGTVSTEEKAETARKL----GCH-HT--INYSTQDFAEVVREITGGK 213 (333)
T ss_dssp CCCTTCEEEETTTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHH----TCS-EE--EETTTSCHHHHHHHHHTTC
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc----CCC-EE--EECCCHHHHHHHHHHhCCC
Confidence 3457789999995 5677777776553 35999999999888877653 111 11 2332221110 11123
Q ss_pred cccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEec
Q psy1107 150 SVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 150 ~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~ 190 (218)
.+|+++.... . ..+..+.+.|+++|.+++...
T Consensus 214 ~~d~vi~~~g-------~--~~~~~~~~~l~~~G~iv~~g~ 245 (333)
T 1wly_A 214 GVDVVYDSIG-------K--DTLQKSLDCLRPRGMCAAYGH 245 (333)
T ss_dssp CEEEEEECSC-------T--TTHHHHHHTEEEEEEEEECCC
T ss_pred CCeEEEECCc-------H--HHHHHHHHhhccCCEEEEEec
Confidence 6899885421 1 356778889999999888653
No 429
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=84.56 E-value=2 Score=32.29 Aligned_cols=80 Identities=9% Similarity=-0.096 Sum_probs=44.4
Q ss_pred CCcEEEEecCCCchhHHHHhhcC--CccEEEEEeC-CHHHHHHHHhCCcccCCCceEEeccCCCcccccC-CC-----CC
Q psy1107 79 GEGVLLEVGCGVGNFIFPLLSWS--KICYIHACDI-SPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQ-VP-----HN 149 (218)
Q Consensus 79 ~~~~vLDiGcG~G~~~~~~~~~~--~~~~v~~~D~-s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~-~~-----~~ 149 (218)
++++||=.|+ +|..+..+++.. ...++++++- ++...+.........+.++.++.+|+.+.+-... +. -+
T Consensus 20 ~~k~vlItGa-sggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 98 (274)
T 1ja9_A 20 AGKVALTTGA-GRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFG 98 (274)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCC-CchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 3567776665 455554444331 1258888887 6655544333222224568889999987532111 11 02
Q ss_pred cccEEEechh
Q psy1107 150 SVDIATLIFV 159 (218)
Q Consensus 150 ~~D~i~~~~~ 159 (218)
.+|+++....
T Consensus 99 ~~d~vi~~Ag 108 (274)
T 1ja9_A 99 GLDFVMSNSG 108 (274)
T ss_dssp CEEEEECCCC
T ss_pred CCCEEEECCC
Confidence 5898887553
No 430
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=84.09 E-value=2.5 Score=33.42 Aligned_cols=97 Identities=8% Similarity=0.102 Sum_probs=60.8
Q ss_pred hcCCC--cEEEEecC--CCchhHHHHhhcCCcc-EEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccc----cCC
Q psy1107 76 QDVGE--GVLLEVGC--GVGNFIFPLLSWSKIC-YIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDIL----NQV 146 (218)
Q Consensus 76 ~~~~~--~~vLDiGc--G~G~~~~~~~~~~~~~-~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~----~~~ 146 (218)
...++ .+||-.|+ |.|..+..++... .+ +|++++.++..++.++.... .. . ..|..+.+.. ...
T Consensus 155 ~~~~g~~~~vlI~GasggiG~~~~~~a~~~-Ga~~Vi~~~~~~~~~~~~~~~~g---~~-~--~~d~~~~~~~~~~~~~~ 227 (357)
T 2zb4_A 155 HITAGSNKTMVVSGAAGACGSVAGQIGHFL-GCSRVVGICGTHEKCILLTSELG---FD-A--AINYKKDNVAEQLRESC 227 (357)
T ss_dssp CCCTTSCCEEEESSTTBHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSC---CS-E--EEETTTSCHHHHHHHHC
T ss_pred CCCCCCccEEEEECCCcHHHHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHcC---Cc-e--EEecCchHHHHHHHHhc
Confidence 34567 89999997 3566666666543 35 89999999988888775321 11 1 1233222111 111
Q ss_pred CCCcccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 147 PHNSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 147 ~~~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
.. .+|+++.. .. ...+..+.+.|+++|.+++..
T Consensus 228 ~~-~~d~vi~~-----~G----~~~~~~~~~~l~~~G~iv~~G 260 (357)
T 2zb4_A 228 PA-GVDVYFDN-----VG----GNISDTVISQMNENSHIILCG 260 (357)
T ss_dssp TT-CEEEEEES-----CC----HHHHHHHHHTEEEEEEEEECC
T ss_pred CC-CCCEEEEC-----CC----HHHHHHHHHHhccCcEEEEEC
Confidence 22 68988853 21 156788889999999988754
No 431
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=83.92 E-value=2.4 Score=32.24 Aligned_cols=110 Identities=15% Similarity=0.146 Sum_probs=57.0
Q ss_pred CCcEEEEecCCCchhHHHHhhcC--CccEEEEEeCCHHH-HHHHHhCCcccCCCceEEeccCCCcccccC-CC-----CC
Q psy1107 79 GEGVLLEVGCGVGNFIFPLLSWS--KICYIHACDISPRA-VNFFKLNPLYDASKMNVFPCDVTEDDILNQ-VP-----HN 149 (218)
Q Consensus 79 ~~~~vLDiGcG~G~~~~~~~~~~--~~~~v~~~D~s~~~-~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~-~~-----~~ 149 (218)
+++++|=.|++.| ++..++... ...+|++++.+... .+.+.......+.++.++.+|+.+..-... +. -+
T Consensus 28 ~~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 106 (283)
T 1g0o_A 28 EGKVALVTGAGRG-IGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFG 106 (283)
T ss_dssp TTCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 3567777766544 444444321 12588888876532 222222112224568888999887531111 00 13
Q ss_pred cccEEEechhhcCC------CcchHH-----------HHHHHHHHhccCCeEEEEEe
Q psy1107 150 SVDIATLIFVLSAI------HPNKFS-----------TVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 150 ~~D~i~~~~~l~~~------~~~~~~-----------~~l~~~~~~Lk~gG~li~~~ 189 (218)
..|+++.+..+... +++++. .+++.+.+.++.+|.++...
T Consensus 107 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 163 (283)
T 1g0o_A 107 KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMG 163 (283)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEEC
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 67988886543322 223332 23344556666778777654
No 432
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=83.86 E-value=4.5 Score=30.29 Aligned_cols=78 Identities=9% Similarity=-0.020 Sum_probs=49.9
Q ss_pred CCcEEEEecCCC--c---hhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC-CCceEEeccCCCcccccC-C-----
Q psy1107 79 GEGVLLEVGCGV--G---NFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA-SKMNVFPCDVTEDDILNQ-V----- 146 (218)
Q Consensus 79 ~~~~vLDiGcG~--G---~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~-~----- 146 (218)
+++++|=-|+++ | ..+..+++.+ ++|+.++.++...+.+.+.....+ .++.++.+|+.+.+-... +
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~G--a~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLG--AKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGK 82 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTT--CEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 567888888543 3 2345555555 689999998877766665544333 578899999987532110 0
Q ss_pred CCCcccEEEech
Q psy1107 147 PHNSVDIATLIF 158 (218)
Q Consensus 147 ~~~~~D~i~~~~ 158 (218)
.-+..|+++.+.
T Consensus 83 ~~G~iD~lvnnA 94 (256)
T 4fs3_A 83 DVGNIDGVYHSI 94 (256)
T ss_dssp HHCCCSEEEECC
T ss_pred HhCCCCEEEecc
Confidence 115789888754
No 433
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=83.78 E-value=3.3 Score=32.94 Aligned_cols=70 Identities=17% Similarity=0.106 Sum_probs=41.3
Q ss_pred cCCCcEEEEecCC-CchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEE
Q psy1107 77 DVGEGVLLEVGCG-VGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIAT 155 (218)
Q Consensus 77 ~~~~~~vLDiGcG-~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~ 155 (218)
..+..+|+=+||| .|......+... ..++..|.+...++.++.. +..+..|+.+.+-....- ...|+|+
T Consensus 13 ~g~~mkilvlGaG~vG~~~~~~L~~~--~~v~~~~~~~~~~~~~~~~-------~~~~~~d~~d~~~l~~~~-~~~DvVi 82 (365)
T 3abi_A 13 EGRHMKVLILGAGNIGRAIAWDLKDE--FDVYIGDVNNENLEKVKEF-------ATPLKVDASNFDKLVEVM-KEFELVI 82 (365)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHTTT--SEEEEEESCHHHHHHHTTT-------SEEEECCTTCHHHHHHHH-TTCSEEE
T ss_pred cCCccEEEEECCCHHHHHHHHHHhcC--CCeEEEEcCHHHHHHHhcc-------CCcEEEecCCHHHHHHHH-hCCCEEE
Confidence 3456789999996 444433333222 4889999999988877643 344566776543211111 2578888
Q ss_pred e
Q psy1107 156 L 156 (218)
Q Consensus 156 ~ 156 (218)
.
T Consensus 83 ~ 83 (365)
T 3abi_A 83 G 83 (365)
T ss_dssp E
T ss_pred E
Confidence 6
No 434
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=83.74 E-value=0.64 Score=36.94 Aligned_cols=96 Identities=10% Similarity=0.021 Sum_probs=57.5
Q ss_pred CCcEEEEecCC-CchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEec
Q psy1107 79 GEGVLLEVGCG-VGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATLI 157 (218)
Q Consensus 79 ~~~~vLDiGcG-~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~~ 157 (218)
++.+||-+|+| .|..+.++++.. .+++++++.++..++.+++.... . .++ |..+.+...... +.+|+|+..
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~-Ga~Vi~~~~~~~~~~~~~~~lGa--~--~vi--~~~~~~~~~~~~-~g~D~vid~ 251 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAM-GHHVTVISSSNKKREEALQDLGA--D--DYV--IGSDQAKMSELA-DSLDYVIDT 251 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHH-TCEEEEEESSTTHHHHHHTTSCC--S--CEE--ETTCHHHHHHST-TTEEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHHcCC--c--eee--ccccHHHHHHhc-CCCCEEEEC
Confidence 77899999986 566777777653 35899999998888887733221 1 111 111111111111 268998853
Q ss_pred hhhcCCCcchHHHHHHHHHHhccCCeEEEEEec
Q psy1107 158 FVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 158 ~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~ 190 (218)
..-. ..+..+.+.|+++|.++....
T Consensus 252 ~g~~--------~~~~~~~~~l~~~G~iv~~G~ 276 (357)
T 2cf5_A 252 VPVH--------HALEPYLSLLKLDGKLILMGV 276 (357)
T ss_dssp CCSC--------CCSHHHHTTEEEEEEEEECSC
T ss_pred CCCh--------HHHHHHHHHhccCCEEEEeCC
Confidence 2110 124556789999999888653
No 435
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=83.54 E-value=1.6 Score=33.95 Aligned_cols=98 Identities=10% Similarity=-0.007 Sum_probs=60.6
Q ss_pred hcCCCcEEEEecC--CCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccc----cCCCCC
Q psy1107 76 QDVGEGVLLEVGC--GVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDIL----NQVPHN 149 (218)
Q Consensus 76 ~~~~~~~vLDiGc--G~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~----~~~~~~ 149 (218)
...++.+||-.|+ |.|..+..++... .+++++++.++..++.++.. +.. .. .|..+.+.. ......
T Consensus 137 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-G~~V~~~~~~~~~~~~~~~~----g~~-~~--~~~~~~~~~~~~~~~~~~~ 208 (327)
T 1qor_A 137 EIKPDEQFLFHAAAGGVGLIACQWAKAL-GAKLIGTVGTAQKAQSALKA----GAW-QV--INYREEDLVERLKEITGGK 208 (327)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHHH----TCS-EE--EETTTSCHHHHHHHHTTTC
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHc----CCC-EE--EECCCccHHHHHHHHhCCC
Confidence 3457789999984 4666666666543 25899999999888887653 111 11 232222111 112223
Q ss_pred cccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEec
Q psy1107 150 SVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 150 ~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~ 190 (218)
.+|+++.... ...+..+.+.|+++|.+++...
T Consensus 209 ~~D~vi~~~g---------~~~~~~~~~~l~~~G~iv~~g~ 240 (327)
T 1qor_A 209 KVRVVYDSVG---------RDTWERSLDCLQRRGLMVSFGN 240 (327)
T ss_dssp CEEEEEECSC---------GGGHHHHHHTEEEEEEEEECCC
T ss_pred CceEEEECCc---------hHHHHHHHHHhcCCCEEEEEec
Confidence 6899986421 1356778889999999888653
No 436
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=83.47 E-value=6.9 Score=25.75 Aligned_cols=96 Identities=18% Similarity=0.146 Sum_probs=49.6
Q ss_pred CcEEEEecCCCchhHHHHhhcC--CccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEec
Q psy1107 80 EGVLLEVGCGVGNFIFPLLSWS--KICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATLI 157 (218)
Q Consensus 80 ~~~vLDiGcG~G~~~~~~~~~~--~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~~ 157 (218)
..+|+=+|+| ..+..++... ...+++++|.++...+.+... ...++.+|..+........-..+|+|+..
T Consensus 6 ~~~v~I~G~G--~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~------~~~~~~~d~~~~~~l~~~~~~~~d~vi~~ 77 (144)
T 2hmt_A 6 NKQFAVIGLG--RFGGSIVKELHRMGHEVLAVDINEEKVNAYASY------ATHAVIANATEENELLSLGIRNFEYVIVA 77 (144)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTT------CSEEEECCTTCHHHHHTTTGGGCSEEEEC
T ss_pred CCcEEEECCC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh------CCEEEEeCCCCHHHHHhcCCCCCCEEEEC
Confidence 3568888874 4444444321 124789999988765543321 23455667655322222212368988863
Q ss_pred hhhcCCCcc-hHHHHHHHHHHhccCCeEEEEEe
Q psy1107 158 FVLSAIHPN-KFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 158 ~~l~~~~~~-~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
. +.. .....+....+.+.+. .+++..
T Consensus 78 ~-----~~~~~~~~~~~~~~~~~~~~-~ii~~~ 104 (144)
T 2hmt_A 78 I-----GANIQASTLTTLLLKELDIP-NIWVKA 104 (144)
T ss_dssp C-----CSCHHHHHHHHHHHHHTTCS-EEEEEC
T ss_pred C-----CCchHHHHHHHHHHHHcCCC-eEEEEe
Confidence 2 211 2222334444555665 555544
No 437
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=83.45 E-value=2.7 Score=30.77 Aligned_cols=79 Identities=13% Similarity=0.055 Sum_probs=47.1
Q ss_pred CcEEEEecCCCc---hhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCc-ccCCCceEEeccCCCcccccC-CCC-----C
Q psy1107 80 EGVLLEVGCGVG---NFIFPLLSWSKICYIHACDISPRAVNFFKLNPL-YDASKMNVFPCDVTEDDILNQ-VPH-----N 149 (218)
Q Consensus 80 ~~~vLDiGcG~G---~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~-~~~~~i~~~~~d~~~~~~~~~-~~~-----~ 149 (218)
.+++|=.|++.| ..+..+++.+ .+|+.++-+...++.+..... ..+.++.++.+|+.+.+-... +.. +
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 79 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDG--YALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFG 79 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence 346776776544 2333444444 589999988876655543322 234678899999988542111 111 3
Q ss_pred cccEEEechhh
Q psy1107 150 SVDIATLIFVL 160 (218)
Q Consensus 150 ~~D~i~~~~~l 160 (218)
..|+++.+..+
T Consensus 80 ~id~li~~Ag~ 90 (235)
T 3l77_A 80 DVDVVVANAGL 90 (235)
T ss_dssp SCSEEEECCCC
T ss_pred CCCEEEECCcc
Confidence 68998886544
No 438
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=83.42 E-value=2.5 Score=31.82 Aligned_cols=108 Identities=14% Similarity=0.123 Sum_probs=60.3
Q ss_pred CCcEEEEecC-CCchhHHHHhhcC--CccEEEEEeCCHHH-HHHHHhCCcccCCCceEEeccCCCcccccC-CC-----C
Q psy1107 79 GEGVLLEVGC-GVGNFIFPLLSWS--KICYIHACDISPRA-VNFFKLNPLYDASKMNVFPCDVTEDDILNQ-VP-----H 148 (218)
Q Consensus 79 ~~~~vLDiGc-G~G~~~~~~~~~~--~~~~v~~~D~s~~~-~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~-~~-----~ 148 (218)
.++++|=.|+ |+|.++..++... ...+|+.++.++.. ++...... +.++.++.+|+.+.+-... +. -
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 82 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL---PAKAPLLELDVQNEEHLASLAGRVTEAI 82 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTS---SSCCCEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhc---CCCceEEEccCCCHHHHHHHHHHHHHHh
Confidence 3567888887 3565555555431 22588888887644 34443332 3467888999987532111 00 0
Q ss_pred C---cccEEEechhhcC-----------CCcchHHH-----------HHHHHHHhccCCeEEEEEe
Q psy1107 149 N---SVDIATLIFVLSA-----------IHPNKFST-----------VVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 149 ~---~~D~i~~~~~l~~-----------~~~~~~~~-----------~l~~~~~~Lk~gG~li~~~ 189 (218)
+ .+|+++.+..+.. .+++++.. +.+.+.+.++++|.++...
T Consensus 83 g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 148 (269)
T 2h7i_A 83 GAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMD 148 (269)
T ss_dssp CTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEc
Confidence 2 6899887654322 22233332 3344555666678777654
No 439
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=83.34 E-value=4.9 Score=30.46 Aligned_cols=76 Identities=18% Similarity=0.102 Sum_probs=47.3
Q ss_pred CCcEEEEecCCCc---hhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccC-CC-----CC
Q psy1107 79 GEGVLLEVGCGVG---NFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQ-VP-----HN 149 (218)
Q Consensus 79 ~~~~vLDiGcG~G---~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~-~~-----~~ 149 (218)
.++++|=.|++.| ..+..+++.+ .+|+.+|.++..++..... .+.++.++.+|+.+.+-... +. -+
T Consensus 26 ~~k~vlVTGas~GIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 100 (277)
T 4dqx_A 26 NQRVCIVTGGGSGIGRATAELFAKNG--AYVVVADVNEDAAVRVANE---IGSKAFGVRVDVSSAKDAESMVEKTTAKWG 100 (277)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHHH---HCTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHH---hCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4567887777655 2344444444 5899999988766655433 24578889999987532111 10 13
Q ss_pred cccEEEechh
Q psy1107 150 SVDIATLIFV 159 (218)
Q Consensus 150 ~~D~i~~~~~ 159 (218)
..|+++.+..
T Consensus 101 ~iD~lv~nAg 110 (277)
T 4dqx_A 101 RVDVLVNNAG 110 (277)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 6898888654
No 440
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=83.31 E-value=5.3 Score=30.97 Aligned_cols=95 Identities=21% Similarity=0.186 Sum_probs=58.2
Q ss_pred hhcCCCcEEEEec-CC-CchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcc-cccCCCCCcc
Q psy1107 75 NQDVGEGVLLEVG-CG-VGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDD-ILNQVPHNSV 151 (218)
Q Consensus 75 ~~~~~~~~vLDiG-cG-~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~~~~~~ 151 (218)
....++.+||=+| +| .|..+.++++.. .+++++++ ++...+.+++. +.. .. .|..+.+ +.... ..+
T Consensus 148 ~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~-Ga~vi~~~-~~~~~~~~~~l----Ga~-~~--i~~~~~~~~~~~~--~g~ 216 (321)
T 3tqh_A 148 AEVKQGDVVLIHAGAGGVGHLAIQLAKQK-GTTVITTA-SKRNHAFLKAL----GAE-QC--INYHEEDFLLAIS--TPV 216 (321)
T ss_dssp TTCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEE-CHHHHHHHHHH----TCS-EE--EETTTSCHHHHCC--SCE
T ss_pred cCCCCCCEEEEEcCCcHHHHHHHHHHHHc-CCEEEEEe-ccchHHHHHHc----CCC-EE--EeCCCcchhhhhc--cCC
Confidence 4456788999986 54 678888888764 35888887 55557777653 111 11 1222211 11111 368
Q ss_pred cEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 152 DIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 152 D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
|+|+.. .. -. .+..+.+.|+++|.++...
T Consensus 217 D~v~d~-----~g---~~-~~~~~~~~l~~~G~iv~~g 245 (321)
T 3tqh_A 217 DAVIDL-----VG---GD-VGIQSIDCLKETGCIVSVP 245 (321)
T ss_dssp EEEEES-----SC---HH-HHHHHGGGEEEEEEEEECC
T ss_pred CEEEEC-----CC---cH-HHHHHHHhccCCCEEEEeC
Confidence 988842 21 12 2377889999999988754
No 441
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=83.29 E-value=3.3 Score=30.54 Aligned_cols=78 Identities=14% Similarity=0.083 Sum_probs=44.1
Q ss_pred cEEEEecCCCchhHHHHhhcC--CccEEEEEeCCHHHHHHHHhCC-cccCCCceEEeccCCCcccccC-CC-----CCcc
Q psy1107 81 GVLLEVGCGVGNFIFPLLSWS--KICYIHACDISPRAVNFFKLNP-LYDASKMNVFPCDVTEDDILNQ-VP-----HNSV 151 (218)
Q Consensus 81 ~~vLDiGcG~G~~~~~~~~~~--~~~~v~~~D~s~~~~~~~~~~~-~~~~~~i~~~~~d~~~~~~~~~-~~-----~~~~ 151 (218)
+++|=.|++ |..+..++... ...+|++++-++..++...... ...+.++.++.+|+.+.+-... +. -+.+
T Consensus 3 k~vlItGas-ggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (250)
T 2cfc_A 3 RVAIVTGAS-SGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI 81 (250)
T ss_dssp CEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 466766654 44444444321 1258999998887665543322 2223468888999987532111 10 0357
Q ss_pred cEEEechh
Q psy1107 152 DIATLIFV 159 (218)
Q Consensus 152 D~i~~~~~ 159 (218)
|+++....
T Consensus 82 d~li~~Ag 89 (250)
T 2cfc_A 82 DVLVNNAG 89 (250)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 98887653
No 442
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=83.27 E-value=3 Score=32.94 Aligned_cols=98 Identities=11% Similarity=0.019 Sum_probs=60.1
Q ss_pred hcCCCcEEEEecC--CCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCccc----ccCCCCC
Q psy1107 76 QDVGEGVLLEVGC--GVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDI----LNQVPHN 149 (218)
Q Consensus 76 ~~~~~~~vLDiGc--G~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~----~~~~~~~ 149 (218)
...++.+||-.|+ |.|..+..++... .+++++++.++..++.++.. +.. .. .|..+.+. .......
T Consensus 159 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~----g~~-~~--~~~~~~~~~~~~~~~~~~~ 230 (354)
T 2j8z_A 159 NVQAGDYVLIHAGLSGVGTAAIQLTRMA-GAIPLVTAGSQKKLQMAEKL----GAA-AG--FNYKKEDFSEATLKFTKGA 230 (354)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHH----TCS-EE--EETTTSCHHHHHHHHTTTS
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHc----CCc-EE--EecCChHHHHHHHHHhcCC
Confidence 3456789999984 4666666666553 35899999999888888543 111 11 22222211 1112223
Q ss_pred cccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEec
Q psy1107 150 SVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 150 ~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~ 190 (218)
.+|+++.... . ..+..+.+.|+++|.+++...
T Consensus 231 ~~d~vi~~~G-------~--~~~~~~~~~l~~~G~iv~~G~ 262 (354)
T 2j8z_A 231 GVNLILDCIG-------G--SYWEKNVNCLALDGRWVLYGL 262 (354)
T ss_dssp CEEEEEESSC-------G--GGHHHHHHHEEEEEEEEECCC
T ss_pred CceEEEECCC-------c--hHHHHHHHhccCCCEEEEEec
Confidence 6899885421 1 145667889999999888653
No 443
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=83.12 E-value=4 Score=33.73 Aligned_cols=98 Identities=11% Similarity=0.061 Sum_probs=60.0
Q ss_pred CcEEEEecCCCchhHHHHhhcC--CccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEec
Q psy1107 80 EGVLLEVGCGVGNFIFPLLSWS--KICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATLI 157 (218)
Q Consensus 80 ~~~vLDiGcG~G~~~~~~~~~~--~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~~ 157 (218)
.++|+=+||| ..+..+++.. .+..|+.+|.++..++.+.... .+..+.+|.++.+.+....-...|++++.
T Consensus 3 ~M~iiI~G~G--~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~-----~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~ 75 (461)
T 4g65_A 3 AMKIIILGAG--QVGGTLAENLVGENNDITIVDKDGDRLRELQDKY-----DLRVVNGHASHPDVLHEAGAQDADMLVAV 75 (461)
T ss_dssp CEEEEEECCS--HHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS-----SCEEEESCTTCHHHHHHHTTTTCSEEEEC
T ss_pred cCEEEEECCC--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc-----CcEEEEEcCCCHHHHHhcCCCcCCEEEEE
Confidence 4677777776 3444444332 2348999999999998876542 46788899988765443333468988762
Q ss_pred hhhcCCCcchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 158 FVLSAIHPNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 158 ~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
.+.+...-+...+.+.+-+.-..+..-
T Consensus 76 -----t~~De~Nl~~~~~Ak~~~~~~~~iar~ 102 (461)
T 4g65_A 76 -----TNTDETNMAACQVAFTLFNTPNRIARI 102 (461)
T ss_dssp -----CSCHHHHHHHHHHHHHHHCCSSEEEEC
T ss_pred -----cCChHHHHHHHHHHHHhcCCccceeEe
Confidence 122333444455555555554455543
No 444
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=82.96 E-value=3 Score=33.10 Aligned_cols=96 Identities=15% Similarity=0.069 Sum_probs=57.4
Q ss_pred CCcEEEEecCC-CchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEec
Q psy1107 79 GEGVLLEVGCG-VGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATLI 157 (218)
Q Consensus 79 ~~~~vLDiGcG-~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~~ 157 (218)
++.+||-+|+| .|..+.++++.. .+++++++.++..++.+.+.... . .++ |..+.+...... +.+|+|+..
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~lGa---~-~v~--~~~~~~~~~~~~-~~~D~vid~ 258 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAF-GSKVTVISTSPSKKEEALKNFGA---D-SFL--VSRDQEQMQAAA-GTLDGIIDT 258 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCGGGHHHHHHTSCC---S-EEE--ETTCHHHHHHTT-TCEEEEEEC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhcCC---c-eEE--eccCHHHHHHhh-CCCCEEEEC
Confidence 67899999986 466677776653 35899999999888887633221 1 111 222111111111 368999854
Q ss_pred hhhcCCCcchHHHHHHHHHHhccCCeEEEEEec
Q psy1107 158 FVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 158 ~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~ 190 (218)
.... ..+..+.+.|+++|.++....
T Consensus 259 ~g~~--------~~~~~~~~~l~~~G~iv~~g~ 283 (366)
T 1yqd_A 259 VSAV--------HPLLPLFGLLKSHGKLILVGA 283 (366)
T ss_dssp CSSC--------CCSHHHHHHEEEEEEEEECCC
T ss_pred CCcH--------HHHHHHHHHHhcCCEEEEEcc
Confidence 2211 123456678999999887653
No 445
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=82.89 E-value=2.7 Score=31.43 Aligned_cols=80 Identities=13% Similarity=0.022 Sum_probs=45.4
Q ss_pred CCcEEEEecCCCchhHHHHhhcC--CccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccC-CC------CC
Q psy1107 79 GEGVLLEVGCGVGNFIFPLLSWS--KICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQ-VP------HN 149 (218)
Q Consensus 79 ~~~~vLDiGcG~G~~~~~~~~~~--~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~-~~------~~ 149 (218)
.+++||=.|++ |.++..+++.. ...+|++++-++..++.........+.++.++.+|+.+..-... +. .+
T Consensus 13 ~~k~vlITGas-ggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 91 (266)
T 1xq1_A 13 KAKTVLVTGGT-KGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGG 91 (266)
T ss_dssp TTCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 34577766654 44444444321 12589999988776554433322223568888999887532111 10 14
Q ss_pred cccEEEechh
Q psy1107 150 SVDIATLIFV 159 (218)
Q Consensus 150 ~~D~i~~~~~ 159 (218)
.+|+++....
T Consensus 92 ~id~li~~Ag 101 (266)
T 1xq1_A 92 KLDILINNLG 101 (266)
T ss_dssp CCSEEEEECC
T ss_pred CCcEEEECCC
Confidence 6898887553
No 446
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=82.79 E-value=10 Score=35.78 Aligned_cols=82 Identities=17% Similarity=0.103 Sum_probs=53.3
Q ss_pred CCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCc-------cc----ccCCC
Q psy1107 79 GEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTED-------DI----LNQVP 147 (218)
Q Consensus 79 ~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~-------~~----~~~~~ 147 (218)
+..+++|+.||.|.++.-+...+-.-.+.++|+++.+.+..+.+.. ...++..|+... ++ ...++
T Consensus 850 ~~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~~ty~~N~p----~~~~~~~DI~~l~~~~~~gdi~~~~~~~lp 925 (1330)
T 3av4_A 850 PKLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNP----GTTVFTEDCNVLLKLVMAGEVTNSLGQRLP 925 (1330)
T ss_dssp CCEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHHHHHHHHCT----TSEEECSCHHHHHHHHTTTCSBCSSCCBCC
T ss_pred CCceEEecccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCC----CCcEeeccHHHHhHhhhccchhhhhhhhcc
Confidence 4578999999999999888776631258899999999988877642 233444443210 00 01122
Q ss_pred -CCcccEEEechhhcCCC
Q psy1107 148 -HNSVDIATLIFVLSAIH 164 (218)
Q Consensus 148 -~~~~D~i~~~~~l~~~~ 164 (218)
.+.+|+|+.......++
T Consensus 926 ~~~~vDvl~GGpPCQ~FS 943 (1330)
T 3av4_A 926 QKGDVEMLCGGPPCQGFS 943 (1330)
T ss_dssp CTTTCSEEEECCCCTTTC
T ss_pred ccCccceEEecCCCcccc
Confidence 24689999866555554
No 447
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=82.72 E-value=2.4 Score=31.93 Aligned_cols=79 Identities=11% Similarity=0.010 Sum_probs=44.6
Q ss_pred CCcEEEEecCCCchhHHHHh----hcCCccEEEEE-eCCHHHHHHHHhCCcccCCCceEEeccCCCcccccC-CC-----
Q psy1107 79 GEGVLLEVGCGVGNFIFPLL----SWSKICYIHAC-DISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQ-VP----- 147 (218)
Q Consensus 79 ~~~~vLDiGcG~G~~~~~~~----~~~~~~~v~~~-D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~-~~----- 147 (218)
+..++|=.|++.| ++..++ +.+ .+|+.+ ..+....+.........+.++.++.+|+.+..-... +.
T Consensus 25 ~~k~vlITGas~g-IG~a~a~~l~~~G--~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 101 (272)
T 4e3z_A 25 DTPVVLVTGGSRG-IGAAVCRLAARQG--WRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQ 101 (272)
T ss_dssp CSCEEEETTTTSH-HHHHHHHHHHHTT--CEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCC--CEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 4557776766544 444443 434 467665 566665555444333334678899999987532111 00
Q ss_pred CCcccEEEechhh
Q psy1107 148 HNSVDIATLIFVL 160 (218)
Q Consensus 148 ~~~~D~i~~~~~l 160 (218)
-+..|+++.+..+
T Consensus 102 ~g~id~li~nAg~ 114 (272)
T 4e3z_A 102 FGRLDGLVNNAGI 114 (272)
T ss_dssp HSCCCEEEECCCC
T ss_pred CCCCCEEEECCCC
Confidence 0367988876543
No 448
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=82.67 E-value=9.9 Score=28.45 Aligned_cols=76 Identities=11% Similarity=0.030 Sum_probs=46.7
Q ss_pred CcEEEEecCCCc---hhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccC-CC-----CCc
Q psy1107 80 EGVLLEVGCGVG---NFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQ-VP-----HNS 150 (218)
Q Consensus 80 ~~~vLDiGcG~G---~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~-~~-----~~~ 150 (218)
++++|=.|++.| ..+..+++.+ .+|++++-++..++.+.+... .++.++.+|+.+.+-... +. -+.
T Consensus 6 ~k~vlITGas~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 80 (263)
T 2a4k_A 6 GKTILVTGAASGIGRAALDLFAREG--ASLVAVDREERLLAEAVAALE---AEAIAVVADVSDPKAVEAVFAEALEEFGR 80 (263)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHTCC---SSEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHhc---CceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 457777776544 2333344444 589999998877766655432 467888999987532111 10 135
Q ss_pred ccEEEechhh
Q psy1107 151 VDIATLIFVL 160 (218)
Q Consensus 151 ~D~i~~~~~l 160 (218)
.|+++.+..+
T Consensus 81 iD~lvnnAg~ 90 (263)
T 2a4k_A 81 LHGVAHFAGV 90 (263)
T ss_dssp CCEEEEGGGG
T ss_pred CcEEEECCCC
Confidence 7999886644
No 449
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=82.65 E-value=1.6 Score=32.70 Aligned_cols=78 Identities=14% Similarity=0.136 Sum_probs=46.1
Q ss_pred CCcEEEEecCCCchhHHHH----hhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccC-CC------
Q psy1107 79 GEGVLLEVGCGVGNFIFPL----LSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQ-VP------ 147 (218)
Q Consensus 79 ~~~~vLDiGcG~G~~~~~~----~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~-~~------ 147 (218)
.++++|=.|++.| .+..+ ++.+ .+|++++-++..++.........+.++.++.+|+.+.+-... +.
T Consensus 8 ~~k~vlVTGas~g-iG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (260)
T 2ae2_A 8 EGCTALVTGGSRG-IGYGIVEELASLG--ASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF 84 (260)
T ss_dssp TTCEEEEESCSSH-HHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 3567887776544 44343 4444 589999988876654433222223468888999987531111 10
Q ss_pred CCcccEEEechh
Q psy1107 148 HNSVDIATLIFV 159 (218)
Q Consensus 148 ~~~~D~i~~~~~ 159 (218)
.+..|+++.+..
T Consensus 85 ~g~id~lv~~Ag 96 (260)
T 2ae2_A 85 HGKLNILVNNAG 96 (260)
T ss_dssp TTCCCEEEECCC
T ss_pred CCCCCEEEECCC
Confidence 146899888654
No 450
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=82.65 E-value=1.4 Score=35.05 Aligned_cols=92 Identities=12% Similarity=0.149 Sum_probs=55.9
Q ss_pred CcEEEEecCC-CchhHHHHhhcCCccEEEEEeCCH---HHHHHHHhCCcccCCCceEEeccCCCcccccCC--CCCcccE
Q psy1107 80 EGVLLEVGCG-VGNFIFPLLSWSKICYIHACDISP---RAVNFFKLNPLYDASKMNVFPCDVTEDDILNQV--PHNSVDI 153 (218)
Q Consensus 80 ~~~vLDiGcG-~G~~~~~~~~~~~~~~v~~~D~s~---~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~--~~~~~D~ 153 (218)
+.+||-+|+| .|..+..++... .++|++++.++ ...+.++.. + .... | .+ ++...+ ....+|+
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~~~~----g--a~~v--~-~~-~~~~~~~~~~~~~d~ 249 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTY-GLEVWMANRREPTEVEQTVIEET----K--TNYY--N-SS-NGYDKLKDSVGKFDV 249 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHH-TCEEEEEESSCCCHHHHHHHHHH----T--CEEE--E-CT-TCSHHHHHHHCCEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCccchHHHHHHHHh----C--Ccee--c-hH-HHHHHHHHhCCCCCE
Confidence 7899999984 355566666543 25899999987 777777643 1 1111 2 21 111110 1146899
Q ss_pred EEechhhcCCCcchHHHHH-HHHHHhccCCeEEEEEec
Q psy1107 154 ATLIFVLSAIHPNKFSTVV-KNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 154 i~~~~~l~~~~~~~~~~~l-~~~~~~Lk~gG~li~~~~ 190 (218)
|+.... .+ ..+ ..+.+.|+++|.+++...
T Consensus 250 vid~~g---~~-----~~~~~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 250 IIDATG---AD-----VNILGNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp EEECCC---CC-----THHHHHHGGGEEEEEEEEECSC
T ss_pred EEECCC---Ch-----HHHHHHHHHHHhcCCEEEEEec
Confidence 985321 11 245 778899999999888653
No 451
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=82.61 E-value=1.9 Score=32.67 Aligned_cols=77 Identities=13% Similarity=0.015 Sum_probs=44.4
Q ss_pred CcEEEEecCCCchhHHHH----hhcCCccEEEEEeCCHHHHHHHHhCC---cccCCCceEEeccCCCcccccC-CC----
Q psy1107 80 EGVLLEVGCGVGNFIFPL----LSWSKICYIHACDISPRAVNFFKLNP---LYDASKMNVFPCDVTEDDILNQ-VP---- 147 (218)
Q Consensus 80 ~~~vLDiGcG~G~~~~~~----~~~~~~~~v~~~D~s~~~~~~~~~~~---~~~~~~i~~~~~d~~~~~~~~~-~~---- 147 (218)
++++|=.|++. ..+..+ ++.+ .+|++++-++..++.+.... ...+.++.++.+|+.+.+-... +.
T Consensus 6 ~k~vlVTGas~-gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (278)
T 1spx_A 6 EKVAIITGSSN-GIGRATAVLFAREG--AKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG 82 (278)
T ss_dssp TCEEEETTTTS-HHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCc-hHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHH
Confidence 45677666654 444444 3444 58999998887665543322 1122467888999987532111 11
Q ss_pred -CCcccEEEechh
Q psy1107 148 -HNSVDIATLIFV 159 (218)
Q Consensus 148 -~~~~D~i~~~~~ 159 (218)
-+..|+++.+..
T Consensus 83 ~~g~id~lv~~Ag 95 (278)
T 1spx_A 83 KFGKLDILVNNAG 95 (278)
T ss_dssp HHSCCCEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 136898887653
No 452
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=82.35 E-value=1.9 Score=32.12 Aligned_cols=80 Identities=14% Similarity=0.080 Sum_probs=46.0
Q ss_pred CCcEEEEecCCCchhHHHHhhcC--CccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccC-CC-----CCc
Q psy1107 79 GEGVLLEVGCGVGNFIFPLLSWS--KICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQ-VP-----HNS 150 (218)
Q Consensus 79 ~~~~vLDiGcG~G~~~~~~~~~~--~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~-~~-----~~~ 150 (218)
.++++|=.|++ |.++..++... ...+|++++.++...+.........+.++.++.+|+.+.+-... +. .+.
T Consensus 12 ~~k~vlItGas-ggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (260)
T 3awd_A 12 DNRVAIVTGGA-QNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGR 90 (260)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 45678877765 44444444321 12589999988766554433222224578899999987532111 11 135
Q ss_pred ccEEEechh
Q psy1107 151 VDIATLIFV 159 (218)
Q Consensus 151 ~D~i~~~~~ 159 (218)
+|+++....
T Consensus 91 id~vi~~Ag 99 (260)
T 3awd_A 91 VDILVACAG 99 (260)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 798887654
No 453
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=82.24 E-value=1.9 Score=32.61 Aligned_cols=80 Identities=10% Similarity=0.045 Sum_probs=47.3
Q ss_pred CCcEEEEecCCCc---hhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccC-C------CC
Q psy1107 79 GEGVLLEVGCGVG---NFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQ-V------PH 148 (218)
Q Consensus 79 ~~~~vLDiGcG~G---~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~-~------~~ 148 (218)
.++++|=.|++.| ..+..+++.+ .+|++++-++..++.+.......+.++.++.+|+.+.+-... + -.
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 97 (273)
T 1ae1_A 20 KGTTALVTGGSKGIGYAIVEELAGLG--ARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFD 97 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCcchHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 3567887776544 2233334444 589999998876655433322224568889999987532111 0 01
Q ss_pred CcccEEEechhh
Q psy1107 149 NSVDIATLIFVL 160 (218)
Q Consensus 149 ~~~D~i~~~~~l 160 (218)
+..|+++.+...
T Consensus 98 g~id~lv~nAg~ 109 (273)
T 1ae1_A 98 GKLNILVNNAGV 109 (273)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCcEEEECCCC
Confidence 468998886543
No 454
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=81.46 E-value=1.4 Score=33.97 Aligned_cols=46 Identities=24% Similarity=0.316 Sum_probs=30.9
Q ss_pred CcccEEEechhhc--CCC-c--ch----HHHHHHHHHHhccCCeEEEEEecCCCc
Q psy1107 149 NSVDIATLIFVLS--AIH-P--NK----FSTVVKNLFIMLKSGGIILFRDYGLHD 194 (218)
Q Consensus 149 ~~~D~i~~~~~l~--~~~-~--~~----~~~~l~~~~~~Lk~gG~li~~~~~~~~ 194 (218)
+++|+|++.+... +.. . .| ...+++.+..+|+|||.+++-.|+..|
T Consensus 205 ~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~KvyggaD 259 (320)
T 2hwk_A 205 PKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYGYAD 259 (320)
T ss_dssp CCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECCCCS
T ss_pred CcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEecCCc
Confidence 5799999965322 111 1 11 112456678999999999999998884
No 455
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=81.20 E-value=18 Score=28.78 Aligned_cols=94 Identities=12% Similarity=0.046 Sum_probs=57.9
Q ss_pred CCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC---CCceEEeccCCCcccccCCCCCcccEEE
Q psy1107 79 GEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA---SKMNVFPCDVTEDDILNQVPHNSVDIAT 155 (218)
Q Consensus 79 ~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~---~~i~~~~~d~~~~~~~~~~~~~~~D~i~ 155 (218)
...+||.++.+.|.++..++... ++.+.-|..+...++.+...++ ..+.+... . ... ...+|+|+
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~~----~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~--~-----~~~-~~~~~~v~ 105 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEHK----PYSIGDSYISELATRENLRLNGIDESSVKFLDS--T-----ADY-PQQPGVVL 105 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGGC----CEEEESCHHHHHHHHHHHHHTTCCGGGSEEEET--T-----SCC-CSSCSEEE
T ss_pred CCCCEEEECCCCCHHHHhhccCC----ceEEEhHHHHHHHHHHHHHHcCCCccceEeccc--c-----ccc-ccCCCEEE
Confidence 44689999999999987776543 2334334544444444433322 12444322 1 122 23789888
Q ss_pred echhhcCCCc--chHHHHHHHHHHhccCCeEEEEEe
Q psy1107 156 LIFVLSAIHP--NKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 156 ~~~~l~~~~~--~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
. .+|+ +.....+..+...|.+|+.+++..
T Consensus 106 ~-----~lpk~~~~l~~~L~~l~~~l~~~~~i~~~g 136 (375)
T 4dcm_A 106 I-----KVPKTLALLEQQLRALRKVVTSDTRIIAGA 136 (375)
T ss_dssp E-----ECCSCHHHHHHHHHHHHTTCCTTSEEEEEE
T ss_pred E-----EcCCCHHHHHHHHHHHHhhCCCCCEEEEEe
Confidence 5 3443 456677788889999999998765
No 456
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=80.73 E-value=0.92 Score=34.34 Aligned_cols=57 Identities=14% Similarity=0.126 Sum_probs=32.7
Q ss_pred eEEeccCCCcccccCCCCCcccEEEechhhcCC--------Cc----chHHHHHHHHHHhccCCeEEEEEe
Q psy1107 131 NVFPCDVTEDDILNQVPHNSVDIATLIFVLSAI--------HP----NKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 131 ~~~~~d~~~~~~~~~~~~~~~D~i~~~~~l~~~--------~~----~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
.++++|..+. ...++.+++|+|++.-....- .. +.....+..+.++|+|+|.+++..
T Consensus 6 ~l~~gD~~~~--l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~ 74 (260)
T 1g60_A 6 KIHQMNCFDF--LDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFN 74 (260)
T ss_dssp SEEECCHHHH--HHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEechHHHH--HHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEc
Confidence 3455554331 123445578888774322111 00 134567788899999999988863
No 457
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=80.50 E-value=3.3 Score=33.84 Aligned_cols=101 Identities=14% Similarity=0.097 Sum_probs=61.1
Q ss_pred hcCCCcEEEEecC-C-CchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCC--------------
Q psy1107 76 QDVGEGVLLEVGC-G-VGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTE-------------- 139 (218)
Q Consensus 76 ~~~~~~~vLDiGc-G-~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~-------------- 139 (218)
...++.+||=.|+ | .|..+..+++.. .+++++++.++..++.+++.-.. .-+.....|+..
T Consensus 217 ~~~~g~~VlV~GasG~iG~~a~qla~~~-Ga~vi~~~~~~~~~~~~~~lGa~--~~i~~~~~~~~~~~~~~~~~~~~~~~ 293 (447)
T 4a0s_A 217 QMKQGDIVLIWGASGGLGSYAIQFVKNG-GGIPVAVVSSAQKEAAVRALGCD--LVINRAELGITDDIADDPRRVVETGR 293 (447)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTTCC--CEEEHHHHTCCTTGGGCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhcCCC--EEEecccccccccccccccccchhhh
Confidence 3467889999997 3 567777777653 36899999999999988764110 001111111100
Q ss_pred ---cccccCCCCCcccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 140 ---DDILNQVPHNSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 140 ---~~~~~~~~~~~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
..+.... ...+|+|+.. .. . ..+..+.+.|+++|.+++..
T Consensus 294 ~~~~~v~~~~-g~g~Dvvid~-----~G--~--~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 294 KLAKLVVEKA-GREPDIVFEH-----TG--R--VTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHHHH-SSCCSEEEEC-----SC--H--HHHHHHHHHSCTTCEEEESC
T ss_pred HHHHHHHHHh-CCCceEEEEC-----CC--c--hHHHHHHHHHhcCCEEEEEe
Confidence 0000001 2368998853 21 1 35677888999999998865
No 458
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=80.06 E-value=2.4 Score=33.02 Aligned_cols=80 Identities=14% Similarity=0.128 Sum_probs=49.1
Q ss_pred CCcEEEEecCCCc---hhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccC--CCceEEeccCCCcccccC-C-----C
Q psy1107 79 GEGVLLEVGCGVG---NFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDA--SKMNVFPCDVTEDDILNQ-V-----P 147 (218)
Q Consensus 79 ~~~~vLDiGcG~G---~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~-~-----~ 147 (218)
.+.+||=.|++.| .++..+++.+ .+|++++.++..++.+.......+ .++.++.+|+.+..-... + .
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~G--~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 84 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQG--CKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEAR 84 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence 3567888887655 2334444444 589999999887666554433222 278889999988532111 0 0
Q ss_pred CCcccEEEechhh
Q psy1107 148 HNSVDIATLIFVL 160 (218)
Q Consensus 148 ~~~~D~i~~~~~l 160 (218)
.+..|+++.+..+
T Consensus 85 ~g~id~lv~nAg~ 97 (319)
T 3ioy_A 85 FGPVSILCNNAGV 97 (319)
T ss_dssp TCCEEEEEECCCC
T ss_pred CCCCCEEEECCCc
Confidence 1368999886643
No 459
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=79.99 E-value=3.8 Score=30.57 Aligned_cols=77 Identities=14% Similarity=0.041 Sum_probs=40.9
Q ss_pred CCcEEEEecCCCc---hhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccC-CC-----CC
Q psy1107 79 GEGVLLEVGCGVG---NFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQ-VP-----HN 149 (218)
Q Consensus 79 ~~~~vLDiGcG~G---~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~-~~-----~~ 149 (218)
.++++|=.|++.| ..+..+++.+ .+|+.++.++...+..... .+.++.++.+|+.+.+-... +. -+
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 80 (257)
T 3tpc_A 6 KSRVFIVTGASSGLGAAVTRMLAQEG--ATVLGLDLKPPAGEEPAAE---LGAAVRFRNADVTNEADATAALAFAKQEFG 80 (257)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTT--CEEEEEESSCC---------------CEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCC--CEEEEEeCChHHHHHHHHH---hCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4567887777655 2344444444 5899998877655444332 23578899999987532111 00 13
Q ss_pred cccEEEechhh
Q psy1107 150 SVDIATLIFVL 160 (218)
Q Consensus 150 ~~D~i~~~~~l 160 (218)
..|+++.+...
T Consensus 81 ~id~lv~nAg~ 91 (257)
T 3tpc_A 81 HVHGLVNCAGT 91 (257)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68988876543
No 460
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=79.96 E-value=0.9 Score=35.65 Aligned_cols=58 Identities=19% Similarity=0.239 Sum_probs=36.1
Q ss_pred ceEE-eccCCCcccccCCCCCcccEEEechhhcCC------C---cchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 130 MNVF-PCDVTEDDILNQVPHNSVDIATLIFVLSAI------H---PNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 130 i~~~-~~d~~~~~~~~~~~~~~~D~i~~~~~l~~~------~---~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
..++ ++|.... ...++.+++|+|++.-..... . .......+..+.++|+|+|.+++..
T Consensus 39 ~~l~i~gD~l~~--L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~ 106 (319)
T 1eg2_A 39 RHVYDVCDCLDT--LAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFG 106 (319)
T ss_dssp EEEEEECCHHHH--HHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ceEEECCcHHHH--HHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 4455 7776542 123556689999884332111 0 0134567788899999999998864
No 461
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=79.88 E-value=2.6 Score=32.00 Aligned_cols=80 Identities=18% Similarity=0.098 Sum_probs=46.7
Q ss_pred CCcEEEEecCCCc---hhHHHHhhcCCccEEEEEeCC------------HHHHHHHHhCCcccCCCceEEeccCCCcccc
Q psy1107 79 GEGVLLEVGCGVG---NFIFPLLSWSKICYIHACDIS------------PRAVNFFKLNPLYDASKMNVFPCDVTEDDIL 143 (218)
Q Consensus 79 ~~~~vLDiGcG~G---~~~~~~~~~~~~~~v~~~D~s------------~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~ 143 (218)
.++++|=.|++.| ..+..+++.+ .+|+.+|.+ ...++.........+.++.++.+|+.+.+-.
T Consensus 9 ~~k~~lVTGas~gIG~a~a~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 86 (281)
T 3s55_A 9 EGKTALITGGARGMGRSHAVALAEAG--ADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAAL 86 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCC--CeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHH
Confidence 4567888887655 2344444444 589998875 4444433332233346788999999875321
Q ss_pred cC-CC-----CCcccEEEechhh
Q psy1107 144 NQ-VP-----HNSVDIATLIFVL 160 (218)
Q Consensus 144 ~~-~~-----~~~~D~i~~~~~l 160 (218)
.. +. -+..|+++.+..+
T Consensus 87 ~~~~~~~~~~~g~id~lv~nAg~ 109 (281)
T 3s55_A 87 ESFVAEAEDTLGGIDIAITNAGI 109 (281)
T ss_dssp HHHHHHHHHHHTCCCEEEECCCC
T ss_pred HHHHHHHHHhcCCCCEEEECCCC
Confidence 11 10 1368998886543
No 462
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=79.37 E-value=4.2 Score=30.66 Aligned_cols=77 Identities=12% Similarity=0.014 Sum_probs=46.8
Q ss_pred CCcEEEEecCCCc---hhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCC-C-----CC
Q psy1107 79 GEGVLLEVGCGVG---NFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQV-P-----HN 149 (218)
Q Consensus 79 ~~~~vLDiGcG~G---~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~-~-----~~ 149 (218)
.++++|=.|++.| ..+..+++.+ .+|+.+|.+...++...... +.++.++.+|+.+..-...+ . -+
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 84 (271)
T 3tzq_B 10 ENKVAIITGACGGIGLETSRVLARAG--ARVVLADLPETDLAGAAASV---GRGAVHHVVDLTNEVSVRALIDFTIDTFG 84 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEECTTSCHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHHHHh---CCCeEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4567887777655 2344444444 58999998876655544322 45688889999875321111 0 13
Q ss_pred cccEEEechhh
Q psy1107 150 SVDIATLIFVL 160 (218)
Q Consensus 150 ~~D~i~~~~~l 160 (218)
..|+++.+...
T Consensus 85 ~id~lv~nAg~ 95 (271)
T 3tzq_B 85 RLDIVDNNAAH 95 (271)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68988886543
No 463
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=79.36 E-value=1.8 Score=34.10 Aligned_cols=94 Identities=14% Similarity=0.104 Sum_probs=59.8
Q ss_pred hcCCCcEEEEecC-C-CchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccc----cCCCCC
Q psy1107 76 QDVGEGVLLEVGC-G-VGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDIL----NQVPHN 149 (218)
Q Consensus 76 ~~~~~~~vLDiGc-G-~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~----~~~~~~ 149 (218)
...++.+||-+|+ | .|..+..+++.. .++++++ .++..++.+++. +.. . .| ...+.. ......
T Consensus 147 ~~~~g~~VlV~Ga~g~iG~~~~q~a~~~-Ga~Vi~~-~~~~~~~~~~~l----Ga~--~--i~-~~~~~~~~~~~~~~~~ 215 (343)
T 3gaz_A 147 QVQDGQTVLIQGGGGGVGHVAIQIALAR-GARVFAT-ARGSDLEYVRDL----GAT--P--ID-ASREPEDYAAEHTAGQ 215 (343)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEE-ECHHHHHHHHHH----TSE--E--EE-TTSCHHHHHHHHHTTS
T ss_pred CCCCCCEEEEecCCCHHHHHHHHHHHHC-CCEEEEE-eCHHHHHHHHHc----CCC--E--ec-cCCCHHHHHHHHhcCC
Confidence 4467889999994 3 677777777653 3589999 888888888754 111 1 12 111111 111223
Q ss_pred cccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 150 SVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 150 ~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
.+|+|+.. .. . ..+..+.+.|+++|.+++..
T Consensus 216 g~D~vid~-----~g--~--~~~~~~~~~l~~~G~iv~~g 246 (343)
T 3gaz_A 216 GFDLVYDT-----LG--G--PVLDASFSAVKRFGHVVSCL 246 (343)
T ss_dssp CEEEEEES-----SC--T--HHHHHHHHHEEEEEEEEESC
T ss_pred CceEEEEC-----CC--c--HHHHHHHHHHhcCCeEEEEc
Confidence 68998853 22 1 46778888999999988753
No 464
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=79.04 E-value=6.6 Score=28.95 Aligned_cols=78 Identities=10% Similarity=0.103 Sum_probs=48.1
Q ss_pred cCCCcEEEEecCCCc---hhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccC-C-CCCcc
Q psy1107 77 DVGEGVLLEVGCGVG---NFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQ-V-PHNSV 151 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G---~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~-~-~~~~~ 151 (218)
..++++||=.|++.| ..+..+++.+ .+|+.++.+...++...... ..++.+..+|+.+...... + ..+..
T Consensus 11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G--~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~i 85 (249)
T 3f9i_A 11 DLTGKTSLITGASSGIGSAIARLLHKLG--SKVIISGSNEEKLKSLGNAL---KDNYTIEVCNLANKEECSNLISKTSNL 85 (249)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHH---CSSEEEEECCTTSHHHHHHHHHTCSCC
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHHHHh---ccCccEEEcCCCCHHHHHHHHHhcCCC
Confidence 345678887777654 2334444444 58999999887766655432 2467888899887532111 1 11468
Q ss_pred cEEEechh
Q psy1107 152 DIATLIFV 159 (218)
Q Consensus 152 D~i~~~~~ 159 (218)
|+++.+..
T Consensus 86 d~li~~Ag 93 (249)
T 3f9i_A 86 DILVCNAG 93 (249)
T ss_dssp SEEEECCC
T ss_pred CEEEECCC
Confidence 99888654
No 465
>1ej6_A Lambda2; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_U
Probab=78.81 E-value=6.7 Score=35.85 Aligned_cols=97 Identities=21% Similarity=0.251 Sum_probs=62.7
Q ss_pred cCCCcEEEEecCCCchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEe
Q psy1107 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATL 156 (218)
Q Consensus 77 ~~~~~~vLDiGcG~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~ 156 (218)
......+||+|.|.=.-...+.- ++..++.+|+.|-+ +..........|++.|.....+... ..+|++.|
T Consensus 819 ~~~~~~~lDlGTGPE~RiLsLiP--~~~pvtm~D~RP~a-----e~~~~w~~~T~f~~~DyL~~~~~~~---~~~D~vt~ 888 (1289)
T 1ej6_A 819 VYDGDVVLDLGTGPEAKILELIP--ATSPVTCVDIRPTA-----QPSGCWNVRTTFLELDYLSDGWITG---VRGDIVTC 888 (1289)
T ss_dssp CCTTCCEEEESCCSSCGGGGTSC--TTSCEEEEESSCCC-----SCSTTBSSCEEEEESCTTSSSCGGG---CCCSEEEE
T ss_pred ecccceEEEccCCCcceeeeecC--CCCceEEecccCch-----hhhccccccceeeEccccccceeec---CCCcEEEE
Confidence 55678999999987544433332 45689999997754 3333333568999999988655433 36899999
Q ss_pred chhhcCCC---cchHHHHHHHHHHhccCCe
Q psy1107 157 IFVLSAIH---PNKFSTVVKNLFIMLKSGG 183 (218)
Q Consensus 157 ~~~l~~~~---~~~~~~~l~~~~~~Lk~gG 183 (218)
.+.+...- --.....++++.+.+++.|
T Consensus 889 i~SLGAA~A~a~~tl~~~~~q~l~~~~~~~ 918 (1289)
T 1ej6_A 889 MLSLGAAAAGKSMTFDAAFQQLIKVLSKST 918 (1289)
T ss_dssp CSCHHHHHHHHTCCHHHHHHHHHHHHHTSC
T ss_pred EeechhhhhccCCcHHHHHHHHHHHHHhcC
Confidence 66554321 0145667777776665544
No 466
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=78.78 E-value=11 Score=27.80 Aligned_cols=73 Identities=16% Similarity=0.174 Sum_probs=44.6
Q ss_pred cEEEEecCCCc---hhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCC-C-----CCcc
Q psy1107 81 GVLLEVGCGVG---NFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQV-P-----HNSV 151 (218)
Q Consensus 81 ~~vLDiGcG~G---~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~-~-----~~~~ 151 (218)
+++|=.|++.| ..+..+++.+ .+|+.+|.++...+...... .++.++.+|+.+.+-...+ . -+..
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 76 (247)
T 3dii_A 3 RGVIVTGGGHGIGKQICLDFLEAG--DKVCFIDIDEKRSADFAKER----PNLFYFHGDVADPLTLKKFVEYAMEKLQRI 76 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHTTC----TTEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHhc----ccCCeEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence 46776776554 2334444444 58999999988776665432 3566889999875321111 0 1368
Q ss_pred cEEEechh
Q psy1107 152 DIATLIFV 159 (218)
Q Consensus 152 D~i~~~~~ 159 (218)
|+++.+..
T Consensus 77 d~lv~nAg 84 (247)
T 3dii_A 77 DVLVNNAC 84 (247)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 98887653
No 467
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=78.65 E-value=3 Score=31.13 Aligned_cols=76 Identities=14% Similarity=0.077 Sum_probs=44.3
Q ss_pred cEEEEecCCCchhHHHH----hhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccC-CC-----CCc
Q psy1107 81 GVLLEVGCGVGNFIFPL----LSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQ-VP-----HNS 150 (218)
Q Consensus 81 ~~vLDiGcG~G~~~~~~----~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~-~~-----~~~ 150 (218)
+++|=.|++.| .+..+ ++.+ .+|++++.++...+.........+.++.++.+|+.+.+-... +. -+.
T Consensus 3 k~vlVTGas~g-IG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 79 (256)
T 1geg_A 3 KVALVTGAGQG-IGKAIALRLVKDG--FAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGG 79 (256)
T ss_dssp CEEEEETTTSH-HHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred CEEEEECCCCh-HHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 45666665544 44444 4444 589999988876554433322223568888999987532111 10 136
Q ss_pred ccEEEechh
Q psy1107 151 VDIATLIFV 159 (218)
Q Consensus 151 ~D~i~~~~~ 159 (218)
+|+++.+..
T Consensus 80 id~lv~nAg 88 (256)
T 1geg_A 80 FDVIVNNAG 88 (256)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 899888653
No 468
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=78.41 E-value=10 Score=23.89 Aligned_cols=69 Identities=13% Similarity=0.077 Sum_probs=41.8
Q ss_pred CcEEEEecCCCchhHHHHhhc---CCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEe
Q psy1107 80 EGVLLEVGCGVGNFIFPLLSW---SKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATL 156 (218)
Q Consensus 80 ~~~vLDiGcG~G~~~~~~~~~---~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~ 156 (218)
..+|+=+|+ |..+..++.. ....+++++|.++...+.+.. ..+.+..+|+.+.......- ..+|+|+.
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~------~~~~~~~~d~~~~~~~~~~~-~~~d~vi~ 75 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLNR------MGVATKQVDAKDEAGLAKAL-GGFDAVIS 75 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHT------TTCEEEECCTTCHHHHHHHT-TTCSEEEE
T ss_pred cCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHh------CCCcEEEecCCCHHHHHHHH-cCCCEEEE
Confidence 468898998 4444444332 222589999999988777652 24566777776632111111 25798886
Q ss_pred c
Q psy1107 157 I 157 (218)
Q Consensus 157 ~ 157 (218)
.
T Consensus 76 ~ 76 (118)
T 3ic5_A 76 A 76 (118)
T ss_dssp C
T ss_pred C
Confidence 4
No 469
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=78.35 E-value=4.8 Score=30.01 Aligned_cols=79 Identities=14% Similarity=0.098 Sum_probs=49.7
Q ss_pred CCcEEEEecCCCc---hhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccC-CC-----CC
Q psy1107 79 GEGVLLEVGCGVG---NFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQ-VP-----HN 149 (218)
Q Consensus 79 ~~~~vLDiGcG~G---~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~-~~-----~~ 149 (218)
.++++|=.|++.| ..+..+++.+ .+|+.++.++..++.+.......+.++.++.+|+.+.+-... +. -+
T Consensus 5 ~~k~vlVTGas~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 82 (257)
T 3imf_A 5 KEKVVIITGGSSGMGKGMATRFAKEG--ARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFG 82 (257)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 3567777776554 2334444444 589999999888777665544445678999999987532111 00 13
Q ss_pred cccEEEechh
Q psy1107 150 SVDIATLIFV 159 (218)
Q Consensus 150 ~~D~i~~~~~ 159 (218)
..|+++.+..
T Consensus 83 ~id~lv~nAg 92 (257)
T 3imf_A 83 RIDILINNAA 92 (257)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 6898887654
No 470
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=78.18 E-value=2.2 Score=33.62 Aligned_cols=81 Identities=15% Similarity=-0.000 Sum_probs=44.2
Q ss_pred CCcEEEEecCCCchhHHHHhhcC----CccEEEEEeCCHHHHHHH---HhC----CcccCCCceEEeccCCCcccccCCC
Q psy1107 79 GEGVLLEVGCGVGNFIFPLLSWS----KICYIHACDISPRAVNFF---KLN----PLYDASKMNVFPCDVTEDDILNQVP 147 (218)
Q Consensus 79 ~~~~vLDiGcG~G~~~~~~~~~~----~~~~v~~~D~s~~~~~~~---~~~----~~~~~~~i~~~~~d~~~~~~~~~~~ 147 (218)
.+.+||=.| |+|.++..++... ...+|++++-++...... ... ....+..+.++.+|+.+........
T Consensus 9 ~~~~vlVTG-atG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~ 87 (362)
T 3sxp_A 9 ENQTILITG-GAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLE 87 (362)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHT
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhh
Confidence 356777776 5566655554431 346899998654311110 000 0112246788999998754322222
Q ss_pred CCcccEEEechhh
Q psy1107 148 HNSVDIATLIFVL 160 (218)
Q Consensus 148 ~~~~D~i~~~~~l 160 (218)
...+|+|+.....
T Consensus 88 ~~~~D~vih~A~~ 100 (362)
T 3sxp_A 88 KLHFDYLFHQAAV 100 (362)
T ss_dssp TSCCSEEEECCCC
T ss_pred ccCCCEEEECCcc
Confidence 3468999876543
No 471
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=78.13 E-value=2.7 Score=31.89 Aligned_cols=78 Identities=14% Similarity=0.079 Sum_probs=45.3
Q ss_pred CCcEEEEecCCCchhHHHH----hhcCCccEEEEEeCCHHHHHHHHhCCcccCC---CceEEeccCCCcccccC-CC---
Q psy1107 79 GEGVLLEVGCGVGNFIFPL----LSWSKICYIHACDISPRAVNFFKLNPLYDAS---KMNVFPCDVTEDDILNQ-VP--- 147 (218)
Q Consensus 79 ~~~~vLDiGcG~G~~~~~~----~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~---~i~~~~~d~~~~~~~~~-~~--- 147 (218)
.++++|=.|++.| .+..+ ++.+ .+|++++-++..++.........+. ++.++.+|+.+.+-... +.
T Consensus 5 ~~k~vlVTGas~g-IG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 81 (280)
T 1xkq_A 5 SNKTVIITGSSNG-IGRTTAILFAQEG--ANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTL 81 (280)
T ss_dssp TTCEEEETTCSSH-HHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCh-HHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHH
Confidence 3456777766544 44444 4444 5899999988766554433222222 68889999987532111 10
Q ss_pred --CCcccEEEechh
Q psy1107 148 --HNSVDIATLIFV 159 (218)
Q Consensus 148 --~~~~D~i~~~~~ 159 (218)
-+..|+++.+..
T Consensus 82 ~~~g~iD~lv~nAg 95 (280)
T 1xkq_A 82 KQFGKIDVLVNNAG 95 (280)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HhcCCCCEEEECCC
Confidence 136899888654
No 472
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=78.04 E-value=3.3 Score=31.02 Aligned_cols=78 Identities=14% Similarity=0.066 Sum_probs=42.2
Q ss_pred CCcEEEEecCCC-chhHHHHhhcC--CccEEEEEeCCH---HHHHHHHhCCcccCCCceEEeccCCCcccccC------C
Q psy1107 79 GEGVLLEVGCGV-GNFIFPLLSWS--KICYIHACDISP---RAVNFFKLNPLYDASKMNVFPCDVTEDDILNQ------V 146 (218)
Q Consensus 79 ~~~~vLDiGcG~-G~~~~~~~~~~--~~~~v~~~D~s~---~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~------~ 146 (218)
.++++|=.|+++ |..+..++... ...+|+.++-++ ..++..... . ....++.+|+.+.+-... -
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~---~-~~~~~~~~D~~~~~~v~~~~~~~~~ 83 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQ---L-GSDIVLQCDVAEDASIDTMFAELGK 83 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHH---T-TCCCEEECCTTCHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHh---c-CCcEEEEccCCCHHHHHHHHHHHHH
Confidence 346788788652 55554444331 125888888776 222222211 1 234778899887531110 1
Q ss_pred CCCcccEEEechhh
Q psy1107 147 PHNSVDIATLIFVL 160 (218)
Q Consensus 147 ~~~~~D~i~~~~~l 160 (218)
.-+..|+++.+..+
T Consensus 84 ~~g~iD~lv~~Ag~ 97 (265)
T 1qsg_A 84 VWPKFDGFVHSIGF 97 (265)
T ss_dssp TCSSEEEEEECCCC
T ss_pred HcCCCCEEEECCCC
Confidence 11468998886643
No 473
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=78.03 E-value=5.5 Score=29.85 Aligned_cols=78 Identities=12% Similarity=0.056 Sum_probs=50.7
Q ss_pred CCcEEEEecCCCc---hhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccC-C-----CCC
Q psy1107 79 GEGVLLEVGCGVG---NFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQ-V-----PHN 149 (218)
Q Consensus 79 ~~~~vLDiGcG~G---~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~-~-----~~~ 149 (218)
.++++|=.|++.| ..+..+++.+ .+|+.++.+...++.+.......+.++.++.+|+.+.+-... + .-+
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 87 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCAEQG--ADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYG 87 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCc--CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4568888887665 2344445544 589999999887766655444445678999999988532111 0 013
Q ss_pred cccEEEech
Q psy1107 150 SVDIATLIF 158 (218)
Q Consensus 150 ~~D~i~~~~ 158 (218)
..|+++.+.
T Consensus 88 ~id~lv~nA 96 (264)
T 3ucx_A 88 RVDVVINNA 96 (264)
T ss_dssp CCSEEEECC
T ss_pred CCcEEEECC
Confidence 689998765
No 474
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=78.01 E-value=19 Score=26.85 Aligned_cols=65 Identities=17% Similarity=0.074 Sum_probs=44.4
Q ss_pred cEEEEecCCCchhHHHHhhcC--CccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEech
Q psy1107 81 GVLLEVGCGVGNFIFPLLSWS--KICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATLIF 158 (218)
Q Consensus 81 ~~vLDiGcG~G~~~~~~~~~~--~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~~~ 158 (218)
.+||=.|+ |..+..++... ...+|++++-++........ ..+.++.+|+.+.+ -..+|+|+...
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~D~~d~~------~~~~d~vi~~a 71 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA------SGAEPLLWPGEEPS------LDGVTHLLIST 71 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH------TTEEEEESSSSCCC------CTTCCEEEECC
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh------CCCeEEEecccccc------cCCCCEEEECC
Confidence 58999995 77776666542 12589999988766554443 35888899988732 23689888755
Q ss_pred h
Q psy1107 159 V 159 (218)
Q Consensus 159 ~ 159 (218)
.
T Consensus 72 ~ 72 (286)
T 3ius_A 72 A 72 (286)
T ss_dssp C
T ss_pred C
Confidence 4
No 475
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=77.98 E-value=4.8 Score=30.16 Aligned_cols=80 Identities=21% Similarity=0.173 Sum_probs=44.9
Q ss_pred CCcEEEEecCCCc---hhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcc--cCCCceEEeccCCCcccccC-CC-----
Q psy1107 79 GEGVLLEVGCGVG---NFIFPLLSWSKICYIHACDISPRAVNFFKLNPLY--DASKMNVFPCDVTEDDILNQ-VP----- 147 (218)
Q Consensus 79 ~~~~vLDiGcG~G---~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~--~~~~i~~~~~d~~~~~~~~~-~~----- 147 (218)
.++++|=.|++.| ..+..+++.+ .+|++++.++...+.+...... .+.++.++.+|+.+.+-... +.
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 83 (267)
T 2gdz_A 6 NGKVALVTGAAQGIGRAFAEALLLKG--AKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDH 83 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCC--CEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHH
Confidence 3457787776544 2333344444 5899999887665443322111 12467888999987531111 00
Q ss_pred CCcccEEEechhh
Q psy1107 148 HNSVDIATLIFVL 160 (218)
Q Consensus 148 ~~~~D~i~~~~~l 160 (218)
-+..|+++.+...
T Consensus 84 ~g~id~lv~~Ag~ 96 (267)
T 2gdz_A 84 FGRLDILVNNAGV 96 (267)
T ss_dssp HSCCCEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 1357988876543
No 476
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=77.17 E-value=3.2 Score=30.99 Aligned_cols=80 Identities=8% Similarity=0.042 Sum_probs=50.2
Q ss_pred CCcEEEEecCCCc---hhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCC-----CCc
Q psy1107 79 GEGVLLEVGCGVG---NFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVP-----HNS 150 (218)
Q Consensus 79 ~~~~vLDiGcG~G---~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~-----~~~ 150 (218)
+++++|=.|++.| ..+..+++.+ .+|+.++.++..++.+.......+.++.++.+|+.+.+-...+- .+.
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~ 83 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAEG--FTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAP 83 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHTT--CEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCC
Confidence 4567887777665 2344444444 58999998887766555443333567899999998853211100 046
Q ss_pred ccEEEechhh
Q psy1107 151 VDIATLIFVL 160 (218)
Q Consensus 151 ~D~i~~~~~l 160 (218)
.|+++.+..+
T Consensus 84 id~lv~nAg~ 93 (252)
T 3h7a_A 84 LEVTIFNVGA 93 (252)
T ss_dssp EEEEEECCCC
T ss_pred ceEEEECCCc
Confidence 8998876543
No 477
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=77.02 E-value=2.9 Score=31.52 Aligned_cols=80 Identities=9% Similarity=0.033 Sum_probs=43.8
Q ss_pred CCcEEEEecCCCc---hhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccC-CC-----CC
Q psy1107 79 GEGVLLEVGCGVG---NFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQ-VP-----HN 149 (218)
Q Consensus 79 ~~~~vLDiGcG~G---~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~-~~-----~~ 149 (218)
.++++|=.|++.| .++..+++.+ .+|++++-+....+.........+.++.++.+|+.+..-... +. -+
T Consensus 33 ~~k~vlITGasggIG~~la~~L~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 110 (279)
T 3ctm_A 33 KGKVASVTGSSGGIGWAVAEAYAQAG--ADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFG 110 (279)
T ss_dssp TTCEEEETTTTSSHHHHHHHHHHHHT--CEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhC
Confidence 4567777776544 2333344444 488888876544333322212223568888999987532111 11 03
Q ss_pred cccEEEechhh
Q psy1107 150 SVDIATLIFVL 160 (218)
Q Consensus 150 ~~D~i~~~~~l 160 (218)
.+|+++.....
T Consensus 111 ~id~li~~Ag~ 121 (279)
T 3ctm_A 111 TIDVFVANAGV 121 (279)
T ss_dssp CCSEEEECGGG
T ss_pred CCCEEEECCcc
Confidence 58998886543
No 478
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=76.96 E-value=2.7 Score=32.33 Aligned_cols=80 Identities=14% Similarity=0.018 Sum_probs=45.4
Q ss_pred CCcEEEEecCCCchhHHHHhhcC--CccEEEEEeCCHHHHHHHHhCCcccCC---CceEEeccCCCcccccC-CC-----
Q psy1107 79 GEGVLLEVGCGVGNFIFPLLSWS--KICYIHACDISPRAVNFFKLNPLYDAS---KMNVFPCDVTEDDILNQ-VP----- 147 (218)
Q Consensus 79 ~~~~vLDiGcG~G~~~~~~~~~~--~~~~v~~~D~s~~~~~~~~~~~~~~~~---~i~~~~~d~~~~~~~~~-~~----- 147 (218)
.++++|=.|++. .++..++... ...+|++++.++..++.........+. ++.++.+|+.+..-... +.
T Consensus 25 ~~k~vlVTGas~-gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 103 (297)
T 1xhl_A 25 SGKSVIITGSSN-GIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAK 103 (297)
T ss_dssp TTCEEEETTCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHh
Confidence 456777666654 4444444321 125899999988766554332222222 67888999987532111 10
Q ss_pred CCcccEEEechh
Q psy1107 148 HNSVDIATLIFV 159 (218)
Q Consensus 148 ~~~~D~i~~~~~ 159 (218)
-+.+|+++.+..
T Consensus 104 ~g~iD~lvnnAG 115 (297)
T 1xhl_A 104 FGKIDILVNNAG 115 (297)
T ss_dssp HSCCCEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 136898888654
No 479
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=76.83 E-value=3.9 Score=32.55 Aligned_cols=97 Identities=16% Similarity=0.150 Sum_probs=57.6
Q ss_pred cCCCcEEEEec-CC-CchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCC-CCCcccE
Q psy1107 77 DVGEGVLLEVG-CG-VGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQV-PHNSVDI 153 (218)
Q Consensus 77 ~~~~~~vLDiG-cG-~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~-~~~~~D~ 153 (218)
..++.+||=.| +| .|..+.++++.. .+++++++ ++...+.+++. +.. .++ |..+.++...+ ....+|+
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~-Ga~Vi~~~-~~~~~~~~~~l----Ga~-~v~--~~~~~~~~~~~~~~~g~D~ 251 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAW-DAHVTAVC-SQDASELVRKL----GAD-DVI--DYKSGSVEEQLKSLKPFDF 251 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEE-CGGGHHHHHHT----TCS-EEE--ETTSSCHHHHHHTSCCBSE
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhC-CCEEEEEe-ChHHHHHHHHc----CCC-EEE--ECCchHHHHHHhhcCCCCE
Confidence 45678999998 34 677787887653 35899888 67777777654 111 111 22221111100 1136899
Q ss_pred EEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEe
Q psy1107 154 ATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRD 189 (218)
Q Consensus 154 i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 189 (218)
|+.. .. .....+..+.+.|+++|.++...
T Consensus 252 vid~-----~g--~~~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 252 ILDN-----VG--GSTETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp EEES-----SC--TTHHHHGGGGBCSSSCCEEEESC
T ss_pred EEEC-----CC--ChhhhhHHHHHhhcCCcEEEEeC
Confidence 8853 21 11134566778899999988754
No 480
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=76.81 E-value=22 Score=26.86 Aligned_cols=89 Identities=19% Similarity=0.149 Sum_probs=51.8
Q ss_pred cEEEEecCCC-c-hhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEech
Q psy1107 81 GVLLEVGCGV-G-NFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATLIF 158 (218)
Q Consensus 81 ~~vLDiGcG~-G-~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~~~ 158 (218)
.+|.=||+|. | .++..++..++..+|+++|.++..++.+... +. ......|..+ .. ...|+|+.
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~----g~-~~~~~~~~~~-----~~--~~aDvVil-- 72 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALER----GI-VDEATADFKV-----FA--ALADVIIL-- 72 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHT----TS-CSEEESCTTT-----TG--GGCSEEEE--
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHc----CC-cccccCCHHH-----hh--cCCCEEEE--
Confidence 5788899884 2 2334444444345899999999887776542 10 0011112111 11 25688885
Q ss_pred hhcCCCcchHHHHHHHHHHh-ccCCeEEE
Q psy1107 159 VLSAIHPNKFSTVVKNLFIM-LKSGGIIL 186 (218)
Q Consensus 159 ~l~~~~~~~~~~~l~~~~~~-Lk~gG~li 186 (218)
.+++.....++..+... ++++.+++
T Consensus 73 ---avp~~~~~~v~~~l~~~~l~~~~ivi 98 (290)
T 3b1f_A 73 ---AVPIKKTIDFIKILADLDLKEDVIIT 98 (290)
T ss_dssp ---CSCHHHHHHHHHHHHTSCCCTTCEEE
T ss_pred ---cCCHHHHHHHHHHHHhcCCCCCCEEE
Confidence 34555556777777777 88776554
No 481
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=76.56 E-value=2.4 Score=32.17 Aligned_cols=79 Identities=10% Similarity=0.024 Sum_probs=46.1
Q ss_pred CCcEEEEecCCCc---hhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCC-----CCc
Q psy1107 79 GEGVLLEVGCGVG---NFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVP-----HNS 150 (218)
Q Consensus 79 ~~~~vLDiGcG~G---~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~-----~~~ 150 (218)
.++++|=.|++.| ..+..+++.+ .+|++++-++...+.+... ...+.++.++.+|+.+.+-...+. .+.
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G--~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~ 106 (273)
T 3uf0_A 30 AGRTAVVTGAGSGIGRAIAHGYARAG--AHVLAWGRTDGVKEVADEI-ADGGGSAEAVVADLADLEGAANVAEELAATRR 106 (273)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESSTHHHHHHHHH-HTTTCEEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCC--CEEEEEcCHHHHHHHHHHH-HhcCCcEEEEEecCCCHHHHHHHHHHHHhcCC
Confidence 4678888887655 3344444445 5888888554433333322 223457888999998753211110 146
Q ss_pred ccEEEechhh
Q psy1107 151 VDIATLIFVL 160 (218)
Q Consensus 151 ~D~i~~~~~l 160 (218)
.|+++.+..+
T Consensus 107 iD~lv~nAg~ 116 (273)
T 3uf0_A 107 VDVLVNNAGI 116 (273)
T ss_dssp CCEEEECCCC
T ss_pred CcEEEECCCC
Confidence 8998886543
No 482
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=76.41 E-value=6.1 Score=29.99 Aligned_cols=79 Identities=9% Similarity=-0.035 Sum_probs=44.0
Q ss_pred CCcEEEEecCCCc---hhHHHHhhcCCccEEEEEeCCH-HHHHHHHhCCc-ccCCCceEEeccCCC----cccccC-CC-
Q psy1107 79 GEGVLLEVGCGVG---NFIFPLLSWSKICYIHACDISP-RAVNFFKLNPL-YDASKMNVFPCDVTE----DDILNQ-VP- 147 (218)
Q Consensus 79 ~~~~vLDiGcG~G---~~~~~~~~~~~~~~v~~~D~s~-~~~~~~~~~~~-~~~~~i~~~~~d~~~----~~~~~~-~~- 147 (218)
.++++|=.|++.| ..+..+++.+ .+|++++.++ ..++.+..... ..+.++.++.+|+.+ ..-... +.
T Consensus 22 ~~k~~lVTGas~gIG~aia~~L~~~G--~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~ 99 (288)
T 2x9g_A 22 EAPAAVVTGAAKRIGRAIAVKLHQTG--YRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINS 99 (288)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHHT--CEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCC--CeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHH
Confidence 3567777776544 2333344444 5888888876 54443332221 223578889999987 321110 00
Q ss_pred ----CCcccEEEechh
Q psy1107 148 ----HNSVDIATLIFV 159 (218)
Q Consensus 148 ----~~~~D~i~~~~~ 159 (218)
-+..|+++.+..
T Consensus 100 ~~~~~g~iD~lvnnAG 115 (288)
T 2x9g_A 100 CFRAFGRCDVLVNNAS 115 (288)
T ss_dssp HHHHHSCCCEEEECCC
T ss_pred HHHhcCCCCEEEECCC
Confidence 136898888654
No 483
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=76.38 E-value=10 Score=28.10 Aligned_cols=61 Identities=15% Similarity=0.026 Sum_probs=36.7
Q ss_pred CcEEEEecCCCchhHHHHhhcC-----CccEEEEEeCCHHHHHHHHhCCccc--CCCceEEeccCCCcc
Q psy1107 80 EGVLLEVGCGVGNFIFPLLSWS-----KICYIHACDISPRAVNFFKLNPLYD--ASKMNVFPCDVTEDD 141 (218)
Q Consensus 80 ~~~vLDiGcG~G~~~~~~~~~~-----~~~~v~~~D~s~~~~~~~~~~~~~~--~~~i~~~~~d~~~~~ 141 (218)
++++|=.|++.| ++..++... ...+|++++.++..++.+....... +.++.++.+|+.+.+
T Consensus 6 ~k~~lVTGas~g-IG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~ 73 (259)
T 1oaa_A 6 CAVCVLTGASRG-FGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEA 73 (259)
T ss_dssp SEEEEESSCSSH-HHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHH
T ss_pred CcEEEEeCCCCh-HHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHH
Confidence 456776666544 443443321 2468999999887665544332211 346888899998753
No 484
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=76.20 E-value=4 Score=30.78 Aligned_cols=77 Identities=12% Similarity=0.070 Sum_probs=42.6
Q ss_pred CCcEEEEecCC-CchhHHHHhhcC--CccEEEEEeCCHH---HHHHHHhCCcccCCCceEEeccCCCcccccC-C-----
Q psy1107 79 GEGVLLEVGCG-VGNFIFPLLSWS--KICYIHACDISPR---AVNFFKLNPLYDASKMNVFPCDVTEDDILNQ-V----- 146 (218)
Q Consensus 79 ~~~~vLDiGcG-~G~~~~~~~~~~--~~~~v~~~D~s~~---~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~-~----- 146 (218)
.++++|=.|++ +|..+..++... ...+|+.++-++. .++..... . ..+.++.+|+.+..-... +
T Consensus 5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~---~-~~~~~~~~D~~~~~~v~~~~~~~~~ 80 (275)
T 2pd4_A 5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQE---L-NSPYVYELDVSKEEHFKSLYNSVKK 80 (275)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHH---T-TCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh---c-CCcEEEEcCCCCHHHHHHHHHHHHH
Confidence 35678888875 254554444331 2358988887764 22222211 1 237788899987532111 0
Q ss_pred CCCcccEEEechh
Q psy1107 147 PHNSVDIATLIFV 159 (218)
Q Consensus 147 ~~~~~D~i~~~~~ 159 (218)
.-+..|+++.+..
T Consensus 81 ~~g~id~lv~nAg 93 (275)
T 2pd4_A 81 DLGSLDFIVHSVA 93 (275)
T ss_dssp HTSCEEEEEECCC
T ss_pred HcCCCCEEEECCc
Confidence 0136899888654
No 485
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=76.18 E-value=9.3 Score=28.72 Aligned_cols=78 Identities=12% Similarity=0.146 Sum_probs=44.6
Q ss_pred CCcEEEEecCCCchhHHHHh----hcCCccEEEEEeCCHHHHHHHHhCCccc--CCCceEEeccCCCcccccC-CC----
Q psy1107 79 GEGVLLEVGCGVGNFIFPLL----SWSKICYIHACDISPRAVNFFKLNPLYD--ASKMNVFPCDVTEDDILNQ-VP---- 147 (218)
Q Consensus 79 ~~~~vLDiGcG~G~~~~~~~----~~~~~~~v~~~D~s~~~~~~~~~~~~~~--~~~i~~~~~d~~~~~~~~~-~~---- 147 (218)
+++++|=.|++. .++..++ +.+ .+|++++-++..++......... +.++.++.+|+.+.+-... +.
T Consensus 31 ~~k~vlVTGasg-gIG~~la~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 107 (279)
T 1xg5_A 31 RDRLALVTGASG-GIGAAVARALVQQG--LKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRS 107 (279)
T ss_dssp TTCEEEEESTTS-HHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCc-hHHHHHHHHHHHCC--CEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHH
Confidence 356778777654 4444443 334 58999998876655443322211 1357788899987532111 10
Q ss_pred -CCcccEEEechh
Q psy1107 148 -HNSVDIATLIFV 159 (218)
Q Consensus 148 -~~~~D~i~~~~~ 159 (218)
-+.+|+++....
T Consensus 108 ~~g~iD~vi~~Ag 120 (279)
T 1xg5_A 108 QHSGVDICINNAG 120 (279)
T ss_dssp HHCCCSEEEECCC
T ss_pred hCCCCCEEEECCC
Confidence 135898887654
No 486
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=75.88 E-value=5.9 Score=29.99 Aligned_cols=79 Identities=15% Similarity=0.133 Sum_probs=49.2
Q ss_pred CCcEEEEecCCCc---hhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccC-CC-----CC
Q psy1107 79 GEGVLLEVGCGVG---NFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQ-VP-----HN 149 (218)
Q Consensus 79 ~~~~vLDiGcG~G---~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~-~~-----~~ 149 (218)
.++++|=.|++.| ..+..+++.+ .+|++++.++..++.+.......+.++.++.+|+.+.+-... +. -+
T Consensus 23 ~~k~~lVTGas~GIG~aia~~la~~G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 100 (279)
T 3sju_A 23 RPQTAFVTGVSSGIGLAVARTLAARG--IAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFG 100 (279)
T ss_dssp --CEEEEESTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4668888887655 2344444444 589999998877666554443345678899999987532111 00 13
Q ss_pred cccEEEechh
Q psy1107 150 SVDIATLIFV 159 (218)
Q Consensus 150 ~~D~i~~~~~ 159 (218)
..|+++.+..
T Consensus 101 ~id~lv~nAg 110 (279)
T 3sju_A 101 PIGILVNSAG 110 (279)
T ss_dssp SCCEEEECCC
T ss_pred CCcEEEECCC
Confidence 6898887654
No 487
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=75.83 E-value=7.3 Score=29.58 Aligned_cols=80 Identities=16% Similarity=0.123 Sum_probs=50.4
Q ss_pred CCcEEEEecCCCc---hhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccC-CC-----CC
Q psy1107 79 GEGVLLEVGCGVG---NFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQ-VP-----HN 149 (218)
Q Consensus 79 ~~~~vLDiGcG~G---~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~-~~-----~~ 149 (218)
+++++|=.|++.| ..+..+++.+ .+|+.++.+...++.+.......+.++.++.+|+.+.+-... +. -+
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G--~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 104 (283)
T 3v8b_A 27 PSPVALITGAGSGIGRATALALAADG--VTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFG 104 (283)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 4567887777655 2334444444 589999999887766655444445678899999987532111 00 13
Q ss_pred cccEEEechhh
Q psy1107 150 SVDIATLIFVL 160 (218)
Q Consensus 150 ~~D~i~~~~~l 160 (218)
..|+++.+..+
T Consensus 105 ~iD~lVnnAg~ 115 (283)
T 3v8b_A 105 HLDIVVANAGI 115 (283)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68988876543
No 488
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=75.69 E-value=3.4 Score=30.88 Aligned_cols=78 Identities=15% Similarity=0.056 Sum_probs=44.9
Q ss_pred CcEEEEecCCCc---hhHHHHhhcCCccEEEEEeC-CHHHHHHHHhCCcccCCCceEEeccCCCcccccC-CC-----CC
Q psy1107 80 EGVLLEVGCGVG---NFIFPLLSWSKICYIHACDI-SPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQ-VP-----HN 149 (218)
Q Consensus 80 ~~~vLDiGcG~G---~~~~~~~~~~~~~~v~~~D~-s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~-~~-----~~ 149 (218)
.+++|=.|++.| ..+..+++.+ .++++++- +....+.........+.++.++.+|+.+.+-... +. -+
T Consensus 7 ~k~vlVTGas~gIG~~~a~~l~~~G--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 84 (264)
T 3i4f_A 7 VRHALITAGTKGLGKQVTEKLLAKG--YSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFG 84 (264)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHTT--CEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred cCEEEEeCCCchhHHHHHHHHHHCC--CEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 456776766554 2334444444 47887754 4455555554444444678999999988532111 10 13
Q ss_pred cccEEEechh
Q psy1107 150 SVDIATLIFV 159 (218)
Q Consensus 150 ~~D~i~~~~~ 159 (218)
..|+++.+..
T Consensus 85 ~id~lv~~Ag 94 (264)
T 3i4f_A 85 KIDFLINNAG 94 (264)
T ss_dssp CCCEEECCCC
T ss_pred CCCEEEECCc
Confidence 6898887654
No 489
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=75.57 E-value=5.1 Score=29.88 Aligned_cols=80 Identities=10% Similarity=0.106 Sum_probs=50.0
Q ss_pred CCcEEEEecCCCc---hhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccC-CC-----CC
Q psy1107 79 GEGVLLEVGCGVG---NFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQ-VP-----HN 149 (218)
Q Consensus 79 ~~~~vLDiGcG~G---~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~-~~-----~~ 149 (218)
.++++|=.|++.| ..+..+++.+ .+|+.++.+....+.........+.++.++.+|+.+.+-... +. -+
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 88 (256)
T 3gaf_A 11 NDAVAIVTGAAAGIGRAIAGTFAKAG--ASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFG 88 (256)
T ss_dssp TTCEEEECSCSSHHHHHHHHHHHHHT--CEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4567777776655 2344444445 589999998877666555444345678899999988532111 00 13
Q ss_pred cccEEEechhh
Q psy1107 150 SVDIATLIFVL 160 (218)
Q Consensus 150 ~~D~i~~~~~l 160 (218)
..|+++.+...
T Consensus 89 ~id~lv~nAg~ 99 (256)
T 3gaf_A 89 KITVLVNNAGG 99 (256)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68998886543
No 490
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=75.39 E-value=2.4 Score=33.44 Aligned_cols=97 Identities=16% Similarity=0.126 Sum_probs=54.1
Q ss_pred hhcCCCcEEEEecC-C-CchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccc---cCCCCC
Q psy1107 75 NQDVGEGVLLEVGC-G-VGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDIL---NQVPHN 149 (218)
Q Consensus 75 ~~~~~~~~vLDiGc-G-~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~---~~~~~~ 149 (218)
....++.+||=.|+ | .|..+.++++......+++++ +....+.++ . . . ..++. ...++. .....+
T Consensus 138 ~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~-~-g---a-~~~~~---~~~~~~~~~~~~~~~ 207 (349)
T 4a27_A 138 ANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK-D-S---V-THLFD---RNADYVQEVKRISAE 207 (349)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG-G-G---S-SEEEE---TTSCHHHHHHHHCTT
T ss_pred cCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH-c-C---C-cEEEc---CCccHHHHHHHhcCC
Confidence 34567889999998 3 577787887654345888888 555666665 2 1 1 11211 111110 111234
Q ss_pred cccEEEechhhcCCCcchHHHHHHHHHHhccCCeEEEEEec
Q psy1107 150 SVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDY 190 (218)
Q Consensus 150 ~~D~i~~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~ 190 (218)
.+|+|+-. .. . ..+..+.+.|+++|.+++...
T Consensus 208 g~Dvv~d~-----~g--~--~~~~~~~~~l~~~G~~v~~G~ 239 (349)
T 4a27_A 208 GVDIVLDC-----LC--G--DNTGKGLSLLKPLGTYILYGS 239 (349)
T ss_dssp CEEEEEEE-----CC-----------CTTEEEEEEEEEEC-
T ss_pred CceEEEEC-----CC--c--hhHHHHHHHhhcCCEEEEECC
Confidence 79999853 21 1 123667899999999998653
No 491
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=74.58 E-value=8.2 Score=29.20 Aligned_cols=80 Identities=14% Similarity=0.059 Sum_probs=42.9
Q ss_pred CCcEEEEecCCC-chhHHHHhhcC--CccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccC-C-----CCC
Q psy1107 79 GEGVLLEVGCGV-GNFIFPLLSWS--KICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQ-V-----PHN 149 (218)
Q Consensus 79 ~~~~vLDiGcG~-G~~~~~~~~~~--~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~-~-----~~~ 149 (218)
.++++|=.|+++ |.++..++... ...+|++++-++...+.+....... ..+.++.+|+.+.+-... + .-+
T Consensus 20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 98 (285)
T 2p91_A 20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGF-GSDLVVKCDVSLDEDIKNLKKFLEENWG 98 (285)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHT-TCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 456788888752 55554444331 2258998888764222222111111 236788899987532111 0 013
Q ss_pred cccEEEechh
Q psy1107 150 SVDIATLIFV 159 (218)
Q Consensus 150 ~~D~i~~~~~ 159 (218)
..|+++.+..
T Consensus 99 ~iD~lv~~Ag 108 (285)
T 2p91_A 99 SLDIIVHSIA 108 (285)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 6899888654
No 492
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=73.94 E-value=14 Score=27.71 Aligned_cols=67 Identities=19% Similarity=0.244 Sum_probs=42.3
Q ss_pred cEEEEecCCCchhHHHHhhcC--CccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEech
Q psy1107 81 GVLLEVGCGVGNFIFPLLSWS--KICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATLIF 158 (218)
Q Consensus 81 ~~vLDiGcG~G~~~~~~~~~~--~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~~~ 158 (218)
.+||=.|+ |..+..++... .+.+|++++-++.. ...++.++.+|+.+.........+.+|+|+...
T Consensus 4 ~~ilVtGa--G~iG~~l~~~L~~~g~~V~~~~r~~~~----------~~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~a 71 (286)
T 3gpi_A 4 SKILIAGC--GDLGLELARRLTAQGHEVTGLRRSAQP----------MPAGVQTLIADVTRPDTLASIVHLRPEILVYCV 71 (286)
T ss_dssp CCEEEECC--SHHHHHHHHHHHHTTCCEEEEECTTSC----------CCTTCCEEECCTTCGGGCTTGGGGCCSEEEECH
T ss_pred CcEEEECC--CHHHHHHHHHHHHCCCEEEEEeCCccc----------cccCCceEEccCCChHHHHHhhcCCCCEEEEeC
Confidence 57888884 77766665441 22488888765432 235788999999875433332233589988755
Q ss_pred h
Q psy1107 159 V 159 (218)
Q Consensus 159 ~ 159 (218)
.
T Consensus 72 ~ 72 (286)
T 3gpi_A 72 A 72 (286)
T ss_dssp H
T ss_pred C
Confidence 3
No 493
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=73.77 E-value=2.5 Score=35.70 Aligned_cols=48 Identities=17% Similarity=0.339 Sum_probs=32.1
Q ss_pred CcccEEEechh----hcCCCc-c----hHHHHHHHHHHhccCCeEEEEEecCCCchh
Q psy1107 149 NSVDIATLIFV----LSAIHP-N----KFSTVVKNLFIMLKSGGIILFRDYGLHDMA 196 (218)
Q Consensus 149 ~~~D~i~~~~~----l~~~~~-~----~~~~~l~~~~~~Lk~gG~li~~~~~~~~~~ 196 (218)
++||+|+++.- .||... + ....+-..+...|+|||.+++..|+.-|-.
T Consensus 220 ~ryDlvfvn~~t~yr~HHyqQCeDHa~~l~ml~~~al~~l~pGGt~v~~~YGyADr~ 276 (670)
T 4gua_A 220 ARYDLVFINIGTKYRNHHFQQCEDHAATLKTLSRSALNCLNPGGTLVVKSYGYADRN 276 (670)
T ss_dssp CCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCCSHH
T ss_pred CcccEEEEecCCCcccchHHHHHHHHHHHHHHhHHHHhhcCCCceEEEEEeeccccc
Confidence 68999998532 122210 0 122344667899999999999999987754
No 494
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=73.61 E-value=3.7 Score=31.35 Aligned_cols=80 Identities=6% Similarity=-0.017 Sum_probs=45.9
Q ss_pred CCcEEEEecCCCchhHHHHhhcC--CccEEEEEeCCHHHHHHHHhCCcc-----cCCCceEEeccCCCcccccC-CC---
Q psy1107 79 GEGVLLEVGCGVGNFIFPLLSWS--KICYIHACDISPRAVNFFKLNPLY-----DASKMNVFPCDVTEDDILNQ-VP--- 147 (218)
Q Consensus 79 ~~~~vLDiGcG~G~~~~~~~~~~--~~~~v~~~D~s~~~~~~~~~~~~~-----~~~~i~~~~~d~~~~~~~~~-~~--- 147 (218)
.+.+||=.|++ |.++..++... ...+|++++-+...++.+...... .+.++.++.+|+.+..-... +.
T Consensus 17 ~~k~vlVTGas-ggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 95 (303)
T 1yxm_A 17 QGQVAIVTGGA-TGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL 95 (303)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHH
Confidence 35678877765 44444444321 225899999887665544332111 23578899999987532111 11
Q ss_pred --CCcccEEEechh
Q psy1107 148 --HNSVDIATLIFV 159 (218)
Q Consensus 148 --~~~~D~i~~~~~ 159 (218)
-+.+|+++....
T Consensus 96 ~~~g~id~li~~Ag 109 (303)
T 1yxm_A 96 DTFGKINFLVNNGG 109 (303)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 035899887654
No 495
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=73.53 E-value=6.9 Score=32.66 Aligned_cols=92 Identities=17% Similarity=0.131 Sum_probs=54.7
Q ss_pred cCCCcEEEEecCC-CchhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEE
Q psy1107 77 DVGEGVLLEVGCG-VGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIAT 155 (218)
Q Consensus 77 ~~~~~~vLDiGcG-~G~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~ 155 (218)
..++.+|+=+|+| .|......+... ..+|+++|.++...+.+... + ..+ .++.+ . + ...|+|+
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~-Ga~Viv~d~~~~~~~~A~~~----G--a~~--~~l~e--~---l--~~aDvVi 334 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQ-GARVSVTEIDPINALQAMME----G--FDV--VTVEE--A---I--GDADIVV 334 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHT----T--CEE--CCHHH--H---G--GGCSEEE
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc----C--CEE--ecHHH--H---H--hCCCEEE
Confidence 4578899999986 444444444432 35999999999887777643 1 111 12111 1 1 2579988
Q ss_pred echhhcCCCcchHHHHHHHHHHhccCCeEEEEEecC
Q psy1107 156 LIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYG 191 (218)
Q Consensus 156 ~~~~l~~~~~~~~~~~l~~~~~~Lk~gG~li~~~~~ 191 (218)
..-...++ +-....+.+|+||+++.....
T Consensus 335 ~atgt~~~-------i~~~~l~~mk~ggilvnvG~~ 363 (494)
T 3ce6_A 335 TATGNKDI-------IMLEHIKAMKDHAILGNIGHF 363 (494)
T ss_dssp ECSSSSCS-------BCHHHHHHSCTTCEEEECSSS
T ss_pred ECCCCHHH-------HHHHHHHhcCCCcEEEEeCCC
Confidence 74221111 112566778999988876544
No 496
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=73.43 E-value=13 Score=27.48 Aligned_cols=73 Identities=16% Similarity=0.114 Sum_probs=42.5
Q ss_pred CCcEEEEecCCCc---hhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCC-----CCCc
Q psy1107 79 GEGVLLEVGCGVG---NFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQV-----PHNS 150 (218)
Q Consensus 79 ~~~~vLDiGcG~G---~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~-----~~~~ 150 (218)
.++++|=.|++.| ..+..+++.+ .+|+.++.+...... . .+.++.++.+|+.+.+-...+ ..+.
T Consensus 8 ~~k~vlVTGas~gIG~aia~~l~~~G--~~V~~~~r~~~~~~~--~----~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~ 79 (257)
T 3tl3_A 8 RDAVAVVTGGASGLGLATTKRLLDAG--AQVVVLDIRGEDVVA--D----LGDRARFAAADVTDEAAVASALDLAETMGT 79 (257)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHHT--CEEEEEESSCHHHHH--H----TCTTEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred cCCEEEEeCCCCHHHHHHHHHHHHCC--CEEEEEeCchHHHHH--h----cCCceEEEECCCCCHHHHHHHHHHHHHhCC
Confidence 3567888887655 3344445555 588888875443222 1 135788999999875321110 0146
Q ss_pred ccEEEechh
Q psy1107 151 VDIATLIFV 159 (218)
Q Consensus 151 ~D~i~~~~~ 159 (218)
.|+++.+..
T Consensus 80 id~lv~nAg 88 (257)
T 3tl3_A 80 LRIVVNCAG 88 (257)
T ss_dssp EEEEEECGG
T ss_pred CCEEEECCC
Confidence 899988654
No 497
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=73.43 E-value=26 Score=26.23 Aligned_cols=91 Identities=20% Similarity=0.168 Sum_probs=52.0
Q ss_pred EEEEecCCC-ch-hHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccCCCCCcccEEEechh
Q psy1107 82 VLLEVGCGV-GN-FIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATLIFV 159 (218)
Q Consensus 82 ~vLDiGcG~-G~-~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~~~~~D~i~~~~~ 159 (218)
+|.=||+|. |. ++..++..+...+|+++|.++..++.+... +..... ..|.. ..... ..|+|+.
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~----g~~~~~-~~~~~-----~~~~~-~aDvVil--- 68 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL----GIIDEG-TTSIA-----KVEDF-SPDFVML--- 68 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT----TSCSEE-ESCGG-----GGGGT-CCSEEEE---
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHC----CCcccc-cCCHH-----HHhcC-CCCEEEE---
Confidence 677788873 32 233333334223799999999888777643 111011 11111 11110 4688885
Q ss_pred hcCCCcchHHHHHHHHHHhccCCeEEEEE
Q psy1107 160 LSAIHPNKFSTVVKNLFIMLKSGGIILFR 188 (218)
Q Consensus 160 l~~~~~~~~~~~l~~~~~~Lk~gG~li~~ 188 (218)
.+++.....++..+...++++..++..
T Consensus 69 --avp~~~~~~v~~~l~~~l~~~~iv~~~ 95 (281)
T 2g5c_A 69 --SSPVRTFREIAKKLSYILSEDATVTDQ 95 (281)
T ss_dssp --CSCHHHHHHHHHHHHHHSCTTCEEEEC
T ss_pred --cCCHHHHHHHHHHHHhhCCCCcEEEEC
Confidence 355556667788888888998865543
No 498
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=73.25 E-value=6.1 Score=29.51 Aligned_cols=78 Identities=14% Similarity=0.064 Sum_probs=42.8
Q ss_pred CCcEEEEecCC-CchhHHHHh----hcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccC-CC-----
Q psy1107 79 GEGVLLEVGCG-VGNFIFPLL----SWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQ-VP----- 147 (218)
Q Consensus 79 ~~~~vLDiGcG-~G~~~~~~~----~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~-~~----- 147 (218)
.++++|=.|++ +|..+..++ +.+ .+|++++-++...+.+....... ..+.++.+|+.+.+-... +.
T Consensus 7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~ 83 (261)
T 2wyu_A 7 SGKKALVMGVTNQRSLGFAIAAKLKEAG--AEVALSYQAERLRPEAEKLAEAL-GGALLFRADVTQDEELDALFAGVKEA 83 (261)
T ss_dssp TTCEEEEESCCSSSSHHHHHHHHHHHHT--CEEEEEESCGGGHHHHHHHHHHT-TCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHHHHHHhc-CCcEEEECCCCCHHHHHHHHHHHHHH
Confidence 35678888876 254544444 334 58988888764222222111111 236788899987532111 10
Q ss_pred CCcccEEEechh
Q psy1107 148 HNSVDIATLIFV 159 (218)
Q Consensus 148 ~~~~D~i~~~~~ 159 (218)
-+..|+++.+..
T Consensus 84 ~g~iD~lv~~Ag 95 (261)
T 2wyu_A 84 FGGLDYLVHAIA 95 (261)
T ss_dssp HSSEEEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 136898888654
No 499
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=73.01 E-value=6.8 Score=28.84 Aligned_cols=80 Identities=15% Similarity=0.117 Sum_probs=49.5
Q ss_pred CCcEEEEecCCCc---hhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCcccCCCceEEeccCCCcccccC------CCCC
Q psy1107 79 GEGVLLEVGCGVG---NFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQ------VPHN 149 (218)
Q Consensus 79 ~~~~vLDiGcG~G---~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~------~~~~ 149 (218)
.++++|=.|++.| ..+..+++.+ .+|++++-++...+.........+.++.++.+|+.+..-... -..+
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~~G--~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALASKG--ATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENL 81 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTT--CEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 3557777776544 2344444444 589999998877666555444345678899999987532110 0123
Q ss_pred cccEEEechhh
Q psy1107 150 SVDIATLIFVL 160 (218)
Q Consensus 150 ~~D~i~~~~~l 160 (218)
..|+++.+..+
T Consensus 82 ~id~li~~Ag~ 92 (247)
T 3lyl_A 82 AIDILVNNAGI 92 (247)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68998886543
No 500
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=72.84 E-value=4.6 Score=30.12 Aligned_cols=78 Identities=8% Similarity=0.009 Sum_probs=44.6
Q ss_pred CCcEEEEecCCCc---hhHHHHhhcCCccEEEEEeCCHHHHHHHHhCCccc--CCCceEEeccCCCcccccC-CC-----
Q psy1107 79 GEGVLLEVGCGVG---NFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYD--ASKMNVFPCDVTEDDILNQ-VP----- 147 (218)
Q Consensus 79 ~~~~vLDiGcG~G---~~~~~~~~~~~~~~v~~~D~s~~~~~~~~~~~~~~--~~~i~~~~~d~~~~~~~~~-~~----- 147 (218)
.++++|=.|++.| ..+..+++.+ .+|++++.++...+......... +.++.++.+|+.+.+-... +.
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 83 (260)
T 2z1n_A 6 QGKLAVVTAGSSGLGFASALELARNG--ARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDL 83 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence 3467777776544 2233334444 58999998887655443322111 2268888999987532111 11
Q ss_pred CCcccEEEechh
Q psy1107 148 HNSVDIATLIFV 159 (218)
Q Consensus 148 ~~~~D~i~~~~~ 159 (218)
-+ .|+++.+..
T Consensus 84 ~g-id~lv~~Ag 94 (260)
T 2z1n_A 84 GG-ADILVYSTG 94 (260)
T ss_dssp TC-CSEEEECCC
T ss_pred cC-CCEEEECCC
Confidence 13 898888654
Done!