RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy1107
(218 letters)
>d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine
N-methyltransferase, PNMTase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 263
Score = 84.9 bits (209), Expect = 1e-20
Identities = 31/208 (14%), Positives = 53/208 (25%), Gaps = 44/208 (21%)
Query: 43 NKKKYWDLFYKRNETKFFKDR---NWTVNEFHEFVNQDVGEGV-LLEVGCGVGNFIFPLL 98
+ Y Y W + + G L+++G G ++ LL
Sbjct: 14 EPRAYLRNNYAPPRGDLCNPNGVGPWKLRCLAQTFATGEVSGRTLIDIGSGPT--VYQLL 71
Query: 99 SWSKICY-IHACDISPRAVNFF-----KLNPLYDASKM---------------------- 130
S I D + ++ S
Sbjct: 72 SACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLR 131
Query: 131 ----NVFPCDVTEDDILNQVP--HNSVDIATLIFVLSAIHPN--KFSTVVKNLFIMLKSG 182
V P DV + L D F L A+ P+ F + ++ +L+ G
Sbjct: 132 ARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPG 191
Query: 183 GIILFRDY--GLHDMAQMRFKPGHKISE 208
G +L +A +SE
Sbjct: 192 GHLLLIGALEESWYLAGEARLTVVPVSE 219
>d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase,
INMT {Human (Homo sapiens) [TaxId: 9606]}
Length = 257
Score = 65.5 bits (158), Expect = 1e-13
Identities = 27/205 (13%), Positives = 57/205 (27%), Gaps = 41/205 (20%)
Query: 43 NKKKYWDLFYKRNETKFFKD--RNWTVNEFHEFVNQDVGEG-VLLEVGCGVGNFIFPLLS 99
+ Y +Y + + + + + H+ +G L+++G G I+ +L+
Sbjct: 12 LPRDYLATYYSFDGSPSPEAEMLKFNLECLHKTFGPGGLQGDTLIDIGSGPT--IYQVLA 69
Query: 100 WSKIC-YIHACDISPRAVNFFKLNPLYD-------------------------------A 127
I D + R + + A
Sbjct: 70 ACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRA 129
Query: 128 SKMNVFPCDVTEDDILNQVPHNSVDIATLIFVLSAIHPNK--FSTVVKNLFIMLKSGGII 185
+ V CDV + L D + + + + + NL +LK GG +
Sbjct: 130 AVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHL 189
Query: 186 LFRDYGLHD--MAQMRFKPGHKISE 208
+ M R + +
Sbjct: 190 VTTVTLRLPSYMVGKREFSCVALEK 214
>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone
methyltransferase Dot1l {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 406
Score = 53.2 bits (127), Expect = 5e-09
Identities = 27/197 (13%), Positives = 61/197 (30%), Gaps = 20/197 (10%)
Query: 9 NSVVAPILTDDLNKNLERQNSRLVSKHVAEEIEQNK--KKYWDLFYKRNETKFFKDRNWT 66
N ++ I + +LE + + + + + K K F + +
Sbjct: 141 NKMIREIPRQRIIDHLETIDK--IPRSFIHDFLHIVYTRSIHPQANKLKHYKAFSN--YV 196
Query: 67 VNEF-HEFVNQ-----DVGEG-VLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNF- 118
E F++ + +G +++G GVGN + C+I A +
Sbjct: 197 YGELLPNFLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLT 256
Query: 119 ------FKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATLIFVLSAIHPNKFSTVV 172
K ++N + + + N + +I V + + + V
Sbjct: 257 ILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVAELIPQCDVILVNNFLFDEDLNKKV 316
Query: 173 KNLFIMLKSGGIILFRD 189
+ + K G I+
Sbjct: 317 EKILQTAKVGCKIISLK 333
>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone
methyltransferase Dot1l {Human (Homo sapiens) [TaxId:
9606]}
Length = 328
Score = 52.2 bits (124), Expect = 9e-09
Identities = 16/110 (14%), Positives = 42/110 (38%), Gaps = 5/110 (4%)
Query: 82 VLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVF-----PCD 136
+ +++G GVG + + + + + + + + + + M +
Sbjct: 154 LFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYT 213
Query: 137 VTEDDILNQVPHNSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIIL 186
+ D L++ + ++IFV + + +K F +K GG I+
Sbjct: 214 LERGDFLSEEWRERIANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIV 263
>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 292
Score = 47.2 bits (111), Expect = 4e-07
Identities = 27/183 (14%), Positives = 62/183 (33%), Gaps = 20/183 (10%)
Query: 46 KYWDLFYKRNETKFFKDRNWTVNEFHEFVNQDVGEGVLLEVGCGVGNFIFPLLSWSKICY 105
+ W L+ ++ + + W + + V L+V CG G L+ +
Sbjct: 28 RVWQLYIGDTRSRTAEYKAWLLGLLRQHGCHRV-----LDVACGTGVDSIMLV--EEGFS 80
Query: 106 IHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDIL----NQVPHNSVDIATLIF--- 158
+ + D S + + + + + E + L + + D +
Sbjct: 81 VTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAVICLGNSF 140
Query: 159 ---VLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLHDMAQMRFKPGHKISENLYMRQD 215
S ++ +KN+ M++ GG+++ + P K N+Y + D
Sbjct: 141 AHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRNYDYILSTGCAPPGK---NIYYKSD 197
Query: 216 KTR 218
T+
Sbjct: 198 LTK 200
>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB
{Salmonella typhimurium [TaxId: 90371]}
Length = 198
Score = 46.5 bits (109), Expect = 4e-07
Identities = 23/162 (14%), Positives = 39/162 (24%), Gaps = 9/162 (5%)
Query: 54 RNETKFFKDRNWT--VNEFHEFVNQDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDI 111
R+E F + T ++ + V G L++GCG G L + +
Sbjct: 4 RDENYFTEKYGLTRTHSDVLAAA-KVVAPGRTLDLGCGNGRNSLYLAANGYDVTAWDKNP 62
Query: 112 SPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATLIFVLSAIHPNKFSTV 171
+ A + T D V+ + +
Sbjct: 63 ASMANLERIKAAEGLDNLQTDLVDLNTLT------FDGEYDFILSTVVMMFLEAQTIPGL 116
Query: 172 VKNLFIMLKSGGIILFRDYGLHDMAQMRFKPGHKISENLYMR 213
+ N+ K GG L E R
Sbjct: 117 IANMQRCTKPGGYNLIVAAMDTPDFPCTVGFPFAFKEGELRR 158
>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus
cereus [TaxId: 1396]}
Length = 281
Score = 41.8 bits (97), Expect = 3e-05
Identities = 24/147 (16%), Positives = 50/147 (34%), Gaps = 18/147 (12%)
Query: 45 KKYWDLFYKRNETKFFKDRNWTVNEFHEFVNQDVGEGVLLEVGCGVGNFIFPLLS-WSKI 103
K DL+Y + F + W + + +++ GCG G L+ +
Sbjct: 3 KNTRDLYYNDDYVSFLVNTVWKITK----------PVHIVDYGCGYGYLGLVLMPLLPEG 52
Query: 104 CYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATLIFVLSAI 163
D + + ++ + + E D ++ DIA L +
Sbjct: 53 SKYTGIDSGETLLAEA-----RELFRLLPYDSEFLEGDATEIELNDKYDIAICHAFL--L 105
Query: 164 HPNKFSTVVKNLFIMLKSGGIILFRDY 190
H T+++ + +K GG I+ +
Sbjct: 106 HMTTPETMLQKMIHSVKKGGKIICFEP 132
>d1af7a2 c.66.1.8 (A:92-284) Chemotaxis receptor methyltransferase
CheR, C-terminal domain {Salmonella typhimurium [TaxId:
90371]}
Length = 193
Score = 41.0 bits (95), Expect = 3e-05
Identities = 17/169 (10%), Positives = 36/169 (21%), Gaps = 38/169 (22%)
Query: 55 NETKFFKDRNWTVNEFHEFVNQDVGEGVLLEVGCGVGNFIFPLLSW--------SKICYI 106
N T FF++ + E + GE + G + + +
Sbjct: 1 NLTAFFREAH-HFPILAEHARRRHGEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKV 59
Query: 107 HACDISPRAVNFFKLNPLYDASKMNVFP-----------------------------CDV 137
A DI + + + + P
Sbjct: 60 FASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGLVRVRQELANYVEFSS 119
Query: 138 TEDDILNQVPHNSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIIL 186
D V+ +++ +LK G++
Sbjct: 120 VNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLF 168
>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus
halodurans [TaxId: 86665]}
Length = 231
Score = 41.2 bits (95), Expect = 4e-05
Identities = 16/118 (13%), Positives = 35/118 (29%), Gaps = 7/118 (5%)
Query: 83 LLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDI 142
+L+V G G+ + + A D++ + + + + + E
Sbjct: 19 VLDVATGGGHVANAFA--PFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP 76
Query: 143 LNQVPHNSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLHDMAQMRF 200
+ V H ++ V + +LK GG +L D +
Sbjct: 77 FTDERFHIVTCRIAAH-----HFPNPASFVSEAYRVLKKGGQLLLVDNSAPENDAFDV 129
>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305
{Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Length = 251
Score = 40.9 bits (94), Expect = 5e-05
Identities = 23/143 (16%), Positives = 49/143 (34%), Gaps = 10/143 (6%)
Query: 46 KYWDLFYKRNETKFFKDRNWTVNEFHEFVNQDVGEGVLLEVGCGVGNFIFPLLSWSKICY 105
+Y+D Y+R + + ++ F E ++V +L++ CG G
Sbjct: 10 EYYDTIYRRRIERVKAEIDFVEEIFKEDAKREVRR--VLDLACGTGIPTLE-------LA 60
Query: 106 IHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATLIF-VLSAIH 164
++ ++ L +K + + D+L N D T+ F +
Sbjct: 61 ERGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFKNEFDAVTMFFSTIMYFD 120
Query: 165 PNKFSTVVKNLFIMLKSGGIILF 187
+ + LK GG+ +
Sbjct: 121 EEDLRKLFSKVAEALKPGGVFIT 143
>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis
[TaxId: 1423]}
Length = 234
Score = 40.7 bits (94), Expect = 5e-05
Identities = 18/118 (15%), Positives = 36/118 (30%), Gaps = 7/118 (5%)
Query: 83 LLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDI 142
+L++G G G+ + D + ++ + K
Sbjct: 20 VLDIGAGAGHTALAFS--PYVQECIGVDATK---EMVEVASSFAQEKGVENVRFQQGTAE 74
Query: 143 LNQVPHNSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLHDMAQMRF 200
P +S DI T + H + V+ + +LK G L D+ + +
Sbjct: 75 SLPFPDDSFDIITCRYAAH--HFSDVRKAVREVARVLKQDGRFLLVDHYAPEDPVLDE 130
>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli
[TaxId: 562]}
Length = 245
Score = 39.2 bits (90), Expect = 2e-04
Identities = 19/113 (16%), Positives = 33/113 (29%), Gaps = 6/113 (5%)
Query: 83 LLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDI 142
+L++G G G + D+S K +D
Sbjct: 37 ILDLGSGSGEMLCTWARDHG-ITGTGIDMSSLFTAQAKRRAEE---LGVSERVHFIHNDA 92
Query: 143 LNQVPHNSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLHDM 195
V + D+A + F+ + L LK GGI+L + +
Sbjct: 93 AGYVANEKCDVAACVGAT--WIAGGFAGAEELLAQSLKPGGIMLIGEPYWRQL 143
>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT)
{Archaeon Methanobacterium thermoautotrophicum [TaxId:
145262]}
Length = 186
Score = 38.3 bits (88), Expect = 2e-04
Identities = 23/118 (19%), Positives = 44/118 (37%), Gaps = 9/118 (7%)
Query: 82 VLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDD 141
V ++VGCG G ++ ++A D +P A++ ++N NV + D
Sbjct: 36 VAVDVGCGTGGVTLE--LAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTL--MEGDA 91
Query: 142 ILNQVPHNSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLHDMAQMR 199
+DIA + + +++ + LK GG I+ L +
Sbjct: 92 PEALCKIPDIDIAVVGGSGGELQE-----ILRIIKDKLKPGGRIIVTAILLETKFEAM 144
>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus
fulgidus [TaxId: 2234]}
Length = 209
Score = 38.5 bits (89), Expect = 2e-04
Identities = 17/105 (16%), Positives = 32/105 (30%), Gaps = 6/105 (5%)
Query: 82 VLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDD 141
+L +G G + L I+A + S + L + + + D
Sbjct: 59 RVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEK-----LLELVRERNNIIPLLFDA 113
Query: 142 ILNQVPHNSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIIL 186
V+ LI+ N+ + N LK G ++
Sbjct: 114 SKPWKYSGIVEKVDLIY-QDIAQKNQIEILKANAEFFLKEKGEVV 157
>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia
coli [TaxId: 562]}
Length = 268
Score = 37.6 bits (86), Expect = 5e-04
Identities = 18/123 (14%), Positives = 36/123 (29%), Gaps = 17/123 (13%)
Query: 77 DVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCD 136
D +L++GCG G + D+S A+ +
Sbjct: 82 DDKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRL 141
Query: 137 VTEDDILNQVPHNSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLHDMA 196
D S+D I+ + L ++K GG ++ G +
Sbjct: 142 PFSD--------TSMDAIIRIYAPCKA---------EELARVVKPGGWVITATPGPRHLM 184
Query: 197 QMR 199
+++
Sbjct: 185 ELK 187
>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus
jannaschii [TaxId: 2190]}
Length = 230
Score = 35.5 bits (81), Expect = 0.002
Identities = 21/122 (17%), Positives = 38/122 (31%), Gaps = 10/122 (8%)
Query: 84 LEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDIL 143
L +G G + + ++A + +PR + + D
Sbjct: 79 LYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDA-----CAERENIIPILGDANK 133
Query: 144 NQVPHNSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIIL----FRDYGLHDMAQMR 199
Q N V+ +I+ A ++KN LK GG + R + +
Sbjct: 134 PQEYANIVEKVDVIYEDVAQPNQA-EILIKNAKWFLKKGGYGMIAIKARSIDVTKDPKEI 192
Query: 200 FK 201
FK
Sbjct: 193 FK 194
>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon
Pyrococcus horikoshii [TaxId: 53953]}
Length = 226
Score = 34.7 bits (78), Expect = 0.005
Identities = 23/167 (13%), Positives = 50/167 (29%), Gaps = 10/167 (5%)
Query: 46 KYWDLFYKRNETKFFKDRNWTVNEFHEFVNQDVGEGVLLEVGCGVGNFIFPLLSWSKICY 105
+ + + N ++ +++ + G +L++ CGVG F F L +
Sbjct: 7 RVFPTYTDINSQEYRSRIETLEPLLMKYMKKR---GKVLDLACGVGGFSFLLEDYGFEVV 63
Query: 106 IHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATLIFVLSAIHP 165
A + D + D I + P
Sbjct: 64 GVDIS------EDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSIVHFEP 117
Query: 166 NKFSTVVKNLFIMLKSGGIILFRDYGLHDMAQMRFKPGHKISENLYM 212
+ + V K + +LK G + L ++ R K + + ++
Sbjct: 118 LELNQVFKEVRRVLKPSGKFIMYFTDLRELLP-RLKESLVVGQKYWI 163
>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 280
Score = 34.6 bits (78), Expect = 0.006
Identities = 16/116 (13%), Positives = 33/116 (28%), Gaps = 14/116 (12%)
Query: 83 LLEVGCGVGNFIFPLLS------WSKICYIHACDISPRAVNFFKL------NPLYDASKM 130
+L +G G G +LS + S + +K N
Sbjct: 44 ILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKISNLENVKFAW 103
Query: 131 NVFPCDVTEDDILNQVPHNSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIIL 186
+ + +L + D +I +L + +K +L + +L
Sbjct: 104 HKETSSEYQSRMLEKKELQKWDFIHMIQMLYYVK--DIPATLKFFHSLLGTNAKML 157
>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371
{Clostridium acetobutylicum [TaxId: 1488]}
Length = 246
Score = 34.2 bits (77), Expect = 0.007
Identities = 24/142 (16%), Positives = 46/142 (32%), Gaps = 9/142 (6%)
Query: 46 KYWDLFYKRNETKFFKDRNWTVNEFHEFVNQDVGEGVLLEVGCGVGNFIFPLLSWSKICY 105
+D + + + W+ + V ++ L++ CG GN L K
Sbjct: 8 HIYDKLIRAD----VDYKKWSDFIIEKCVENNLVFDDYLDLACGTGNLTENLC--PKFKN 61
Query: 106 IHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATLIFVLSAIHP 165
A D+S ++ + K + D++ N + L I
Sbjct: 62 TWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNL---NINRKFDLITCCLDSTNYIIDS 118
Query: 166 NKFSTVVKNLFIMLKSGGIILF 187
+ K + LK GG+ +F
Sbjct: 119 DDLKKYFKAVSNHLKEGGVFIF 140
>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas
syringae [TaxId: 317]}
Length = 201
Score = 33.5 bits (75), Expect = 0.010
Identities = 12/140 (8%), Positives = 30/140 (21%), Gaps = 12/140 (8%)
Query: 83 LLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFK----------LNPLYDASKMNV 132
+L CG + L ++ ++S AV + +
Sbjct: 24 VLVPLCGKSQDMSWLSGQG--YHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPG 81
Query: 133 FPCDVTEDDILNQVPHNSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGL 192
+ L + A+ + V++L ++ L
Sbjct: 82 IEIWCGDFFALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEY 141
Query: 193 HDMAQMRFKPGHKISENLYM 212
+ +
Sbjct: 142 DQALLEGPPFSVPQTWLHRV 161
>d1yzha1 c.66.1.53 (A:8-211) tRNA (guanine-N(7)-)-methyltransferase
TrmB {Streptococcus pneumoniae [TaxId: 1313]}
Length = 204
Score = 32.9 bits (74), Expect = 0.016
Identities = 21/113 (18%), Positives = 38/113 (33%), Gaps = 7/113 (6%)
Query: 82 VLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDD 141
+ +EVG G G F+ + + DI +V + L+ + + N+ V D
Sbjct: 34 IHVEVGSGKGAFVSGMAKQNPDINYIGIDIQK-SVLSYALDKVLEVGVPNIKLLWVDGSD 92
Query: 142 ILNQVPHNSVDIATLIFVLSAIHPNKFS------TVVKNLFIMLKSGGIILFR 188
+ + +D L F T + +L G I F+
Sbjct: 93 LTDYFEDGEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFK 145
>d1i4wa_ c.66.1.24 (A:) Transcription factor sc-mtTFB {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 322
Score = 32.3 bits (73), Expect = 0.036
Identities = 15/93 (16%), Positives = 31/93 (33%), Gaps = 4/93 (4%)
Query: 83 LLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDI 142
+L++ GVG + + F LN ++ S + + D +
Sbjct: 47 VLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKF--LNAKFEGSPLQILKRDPYDWST 104
Query: 143 LNQVPHNSVDIATLIFVLSAIHPNKFSTVVKNL 175
+ + + + V S+ H N V N+
Sbjct: 105 YSNLIDE--ERIFVPEVQSSDHINDKFLTVANV 135
>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa
(LmjF30.0810) {Leishmania major [TaxId: 5664]}
Length = 254
Score = 31.1 bits (69), Expect = 0.080
Identities = 22/184 (11%), Positives = 46/184 (25%), Gaps = 15/184 (8%)
Query: 38 EEIEQNKKKYWDLFYKRNET---KFFKDRNWTVNEFHEFVNQ--DVGEGVLLEVGCGVGN 92
+ +YW + + F+ G L+ G G+G
Sbjct: 47 KGWYGKALEYWRTVPATVSGVLGGMDHVHDVDIEGSRNFIASLPGHGTSRALDCGAGIGR 106
Query: 93 FIFPLLSWSKIC-YIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSV 151
L +K+ + + + +P N+
Sbjct: 107 ITKNL--LTKLYATTDLLEPVKHMLEEA-----KRELAGMPVGKFILASMETATLPPNTY 159
Query: 152 DIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLHDMAQM--RFKPGHKISEN 209
D+ + + + F K+ L G I F++ + + S+
Sbjct: 160 DLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFLVDKEDSSLTRSDI 219
Query: 210 LYMR 213
Y R
Sbjct: 220 HYKR 223
>d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase
TrmB {Bacillus subtilis [TaxId: 1423]}
Length = 204
Score = 29.5 bits (65), Expect = 0.25
Identities = 18/113 (15%), Positives = 35/113 (30%), Gaps = 7/113 (6%)
Query: 82 VLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDD 141
+ +EVG G G FI + + ++ + + D+ NV ++ D
Sbjct: 32 IHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAV-QKVKDSEAQNVKLLNIDADT 90
Query: 142 ILNQVPHNSVDIATLIFVLSAIHPNKFSTVVKN------LFIMLKSGGIILFR 188
+ + V L F + ++ GG I F+
Sbjct: 91 LTDVFEPGEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFK 143
>d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase
TM1293 {Thermotoga maritima [TaxId: 2336]}
Length = 208
Score = 29.3 bits (64), Expect = 0.28
Identities = 22/156 (14%), Positives = 44/156 (28%), Gaps = 19/156 (12%)
Query: 46 KYWDLFYKRNETKFFKDRNWTVNEFHEFVNQDVGEGVLLEVGCGVGNFIFPLLSWSKICY 105
++ F E F R ++E + V + EG +E+G G G F P
Sbjct: 4 HIFERFVNEYERWFLVHRFAYLSEL-QAVKCLLPEGRGVEIGVGTGRFAVP---LKIKIG 59
Query: 106 IHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATLIFVLSAIHP 165
+ + S R + ++ E +
Sbjct: 60 V---EPSERMAEIARKRGVFVLKGTAENLPLKDESFDFALMVTTI------------CFV 104
Query: 166 NKFSTVVKNLFIMLKSGGIILFRDYGLHDMAQMRFK 201
+ +K + +LK GG ++ ++
Sbjct: 105 DDPERALKEAYRILKKGGYLIVGIVDRESFLGREYE 140
>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia
carotovora [TaxId: 554]}
Length = 225
Score = 28.7 bits (63), Expect = 0.49
Identities = 14/76 (18%), Positives = 26/76 (34%), Gaps = 6/76 (7%)
Query: 64 NWTVNEFHEFV----NQDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFF 119
N+ + H F+ G LLE+G G+F L I + S A++
Sbjct: 1 NFDFDVMHPFMVRAFTPFFRPGNLLELGSFKGDFTSRLQ--EHFNDITCVEASEEAISHA 58
Query: 120 KLNPLYDASKMNVFPC 135
+ + ++
Sbjct: 59 QGRLKDGITYIHSRFE 74
>d2bm8a1 c.66.1.50 (A:2-233) Cephalosporin hydroxylase CmcI
{Streptomyces clavuligerus [TaxId: 1901]}
Length = 232
Score = 28.2 bits (62), Expect = 0.60
Identities = 16/108 (14%), Positives = 35/108 (32%), Gaps = 4/108 (3%)
Query: 82 VLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDD 141
++E+G G + +KI I I P D + + D ++
Sbjct: 83 TIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASDMENITLHQGDCSDLT 142
Query: 142 ILNQVPHNSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRD 189
+ + + + H N F+ + + +L+ G + D
Sbjct: 143 TFEHLREMAHPL----IFIDNAHANTFNIMKWAVDHLLEEGDYFIIED 186
>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon
Methanococcus jannaschii [TaxId: 2190]}
Length = 194
Score = 28.1 bits (61), Expect = 0.61
Identities = 14/108 (12%), Positives = 29/108 (26%), Gaps = 5/108 (4%)
Query: 80 EGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTE 139
+ +L++GCG G L + ++ + V
Sbjct: 53 DDDILDLGCGYGVIGIALADE----VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVH 108
Query: 140 DDILNQVPHNSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILF 187
D+ V + + A +++ +LK G I
Sbjct: 109 SDLYENVKDRKYNKIITNPPIRAGKEVLH-RIIEEGKELLKDNGEIWV 155
>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 324
Score = 28.6 bits (63), Expect = 0.63
Identities = 19/123 (15%), Positives = 38/123 (30%), Gaps = 19/123 (15%)
Query: 77 DVGEG-VLLEVGCGVGNFIFPLLSW-SKICYIHACDISPRAV-----NFFKLNPLYDASK 129
D+ G +LE G G G L + + ++ N+ + S
Sbjct: 95 DINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSH 154
Query: 130 MNVFPCDVT-----EDDILNQVPHNSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGI 184
+ +P +V + + D L ++P+ + + LK GG+
Sbjct: 155 VEEWPDNVDFIHKDISGATEDIKSLTFD----AVALDMLNPHV---TLPVFYPHLKHGGV 207
Query: 185 ILF 187
Sbjct: 208 CAV 210
>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 316
Score = 28.2 bits (62), Expect = 0.65
Identities = 18/124 (14%), Positives = 39/124 (31%), Gaps = 6/124 (4%)
Query: 75 NQDVGEG-VLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVF 133
N+ + + V+L+VG G G + + S + A+K++
Sbjct: 28 NRHLFKDKVVLDVGSGTGILCMFAAKAGA-RKVIGIECSS---ISDYAVKIVKANKLDHV 83
Query: 134 PCDVTED-DILNQVPHNSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGL 192
+ + + I + + + +TV+ L G+I L
Sbjct: 84 VTIIKGKVEEVELPVEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFPDRATL 143
Query: 193 HDMA 196
+ A
Sbjct: 144 YVTA 147
>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase
{Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}
Length = 252
Score = 28.4 bits (62), Expect = 0.66
Identities = 9/38 (23%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 83 LLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFK 120
+L++GCG G + + I + DI+ ++N +
Sbjct: 28 VLDLGCGKGGDLLKYER-AGIGEYYGVDIAEVSINDAR 64
>d1qama_ c.66.1.24 (A:) rRNA adenine dimethylase {Bacillus subtilis,
Ermc' [TaxId: 1423]}
Length = 235
Score = 26.4 bits (57), Expect = 2.5
Identities = 17/148 (11%), Positives = 43/148 (29%), Gaps = 5/148 (3%)
Query: 59 FFKDRNWTVNEFHEFVNQDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNF 118
F ++ +++ + + + + E+G G G+F L+ D
Sbjct: 3 FITSKH-NIDKIMTNIRLNEHDNIF-EIGSGKGHFTLELVQRCNFVTAIEIDHKLCKTTE 60
Query: 119 FKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATLIFVLSAIHPNKFSTVVKNLFIM 178
K L D V D+ + + I F ++ ++++
Sbjct: 61 NK---LVDHDNFQVLNKDILQFKFPKNQSYKIFGNIPYNISTDIIRKIVFDSIADEIYLI 117
Query: 179 LKSGGIILFRDYGLHDMAQMRFKPGHKI 206
++ G + + + I
Sbjct: 118 VEYGFAKRLLNTKRSLALFLMAEVDISI 145
>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389
{Thermotoga maritima [TaxId: 2336]}
Length = 246
Score = 26.7 bits (57), Expect = 2.6
Identities = 18/156 (11%), Positives = 41/156 (26%), Gaps = 17/156 (10%)
Query: 46 KYWDLFYKRNETKFFKDRNWTVNEFHEFVNQDVGEGVLLEVGCGVGNFIFPLLSWSKICY 105
+ +D Y+ + K + + E++ +L++G G G + L
Sbjct: 14 RAYDSMYETPKWKLY--HRLIGSFLEEYLKNP---CRVLDLGGGTGKWSLFLQERGFEVV 68
Query: 106 IHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATLIFVLSAIHP 165
+ V K +K P + A L +
Sbjct: 69 LVDPSKEMLEVAREKGVKNVVEAKAEDLPF------------PSGAFEAVLALGDVLSYV 116
Query: 166 NKFSTVVKNLFIMLKSGGIILFRDYGLHDMAQMRFK 201
+ +L G+++ + Q +
Sbjct: 117 ENKDKAFSEIRRVLVPDGLLIATVDNFYTFLQQMIE 152
>d1yuba_ c.66.1.24 (A:) rRNA adenine dimethylase {Streptococcus
pneumoniae, Ermam [TaxId: 1313]}
Length = 245
Score = 26.0 bits (56), Expect = 3.3
Identities = 14/75 (18%), Positives = 26/75 (34%), Gaps = 2/75 (2%)
Query: 59 FFKDRNWTVNEFHEFVNQDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNF 118
F +N+ + +N + V E+G G G+ L SK D ++
Sbjct: 11 FLTSEK-VLNQIIKQLNLKETDTVY-EIGTGKGHLTTKLAKISKQVTSIELDSHLFNLSS 68
Query: 119 FKLNPLYDASKMNVF 133
KL + ++
Sbjct: 69 EKLKLNTRVTLIHQD 83
>d1zq9a1 c.66.1.24 (A:36-313) Probable dimethyladenosine transferase
{Human (Homo sapiens) [TaxId: 9606]}
Length = 278
Score = 26.0 bits (56), Expect = 3.5
Identities = 26/132 (19%), Positives = 45/132 (34%), Gaps = 8/132 (6%)
Query: 82 VLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYDASKMNVFPCDVTEDD 141
V+LEVG G GN LL K + AC++ PR V + D
Sbjct: 24 VVLEVGPGTGNMTVKLL--EKAKKVVACELDPRLVAELHKRVQGTPVASKLQVL---VGD 78
Query: 142 ILNQVPHNSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIILFRDYGLHDMAQMRFK 201
+L + L + F + + ++ R++ L +A+ K
Sbjct: 79 VLKTDLPFFDTC---VANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDK 135
Query: 202 PGHKISENLYMR 213
++S N +
Sbjct: 136 LYCRLSINTQLL 147
>d1au7a2 a.35.1.1 (A:5-76) Pit-1 {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 72
Score = 24.4 bits (53), Expect = 4.4
Identities = 9/40 (22%), Positives = 14/40 (35%), Gaps = 2/40 (5%)
Query: 85 EVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPL 124
VG + S + IC +S + N KL +
Sbjct: 25 NVGEALAAVHGSEFSQTTICRFENLQLSFK--NACKLKAI 62
>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 328
Score = 25.6 bits (55), Expect = 4.8
Identities = 22/116 (18%), Positives = 44/116 (37%), Gaps = 10/116 (8%)
Query: 75 NQDVGEG-VLLEVGCGVGNFIFPLLSWSKICYIHACDISP---RAVNFFKLNPLYDASKM 130
N+D+ + ++L+VGCG G ++ D+S A +LN + K+
Sbjct: 33 NKDLFKDKIVLDVGCGTGILSMFAAKHGA-KHVIGVDMSSIIEMAKELVELNGF--SDKI 89
Query: 131 NVFPCDVTEDDILNQVPHNSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIIL 186
+ + + + + F+L + + TV+ L GG+I
Sbjct: 90 TLLRGKLEDVHLPFPKVDIIISEWMGYFLL---YESMMDTVLYARDHYLVEGGLIF 142
>d1qyra_ c.66.1.24 (A:) High level kasugamycin resistance protein
KsgA {Escherichia coli [TaxId: 562]}
Length = 252
Score = 25.3 bits (54), Expect = 6.5
Identities = 12/105 (11%), Positives = 30/105 (28%), Gaps = 2/105 (1%)
Query: 59 FFKDRNWTVNEFHEFVNQDVGEGVLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNF 118
F D+ ++ +N G+ ++ E+G G+ P+ + D A
Sbjct: 3 FLNDQF-VIDSIVSAINPQKGQAMV-EIGPGLAALTEPVGERLDQLTVIELDRDLAARLQ 60
Query: 119 FKLNPLYDASKMNVFPCDVTEDDILNQVPHNSVDIATLIFVLSAI 163
+ ++ ++ L + +S
Sbjct: 61 THPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVFGNLPYNISTP 105
>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase
3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 311
Score = 24.9 bits (53), Expect = 8.8
Identities = 17/114 (14%), Positives = 36/114 (31%), Gaps = 6/114 (5%)
Query: 75 NQDVGEG-VLLEVGCGVGNFIFPLLSWSKICYIHACDISPRAVNFFKLNPLYD-ASKMNV 132
N + + V+L+VGCG G + + + D S + L + +
Sbjct: 30 NPHIFKDKVVLDVGCGTGILSM-FAAKAGAKKVLGVDQSEILYQAMDIIRLNKLEDTITL 88
Query: 133 FPCDVTEDDILNQVPHNSVDIATLIFVLSAIHPNKFSTVVKNLFIMLKSGGIIL 186
+ E ++ I + + + +V+ L GG +
Sbjct: 89 IKGKIEE---VHLPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 139
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.322 0.138 0.419
Gapped
Lambda K H
0.267 0.0559 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 803,050
Number of extensions: 36578
Number of successful extensions: 131
Number of sequences better than 10.0: 1
Number of HSP's gapped: 115
Number of HSP's successfully gapped: 48
Length of query: 218
Length of database: 2,407,596
Length adjustment: 82
Effective length of query: 136
Effective length of database: 1,281,736
Effective search space: 174316096
Effective search space used: 174316096
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (23.8 bits)