BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11074
(710 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3MN8|A Chain A, Structure Of Drosophila Melanogaster Carboxypeptidase D
Isoform 1b Short
pdb|3MN8|B Chain B, Structure Of Drosophila Melanogaster Carboxypeptidase D
Isoform 1b Short
pdb|3MN8|C Chain C, Structure Of Drosophila Melanogaster Carboxypeptidase D
Isoform 1b Short
pdb|3MN8|D Chain D, Structure Of Drosophila Melanogaster Carboxypeptidase D
Isoform 1b Short
Length = 435
Score = 321 bits (822), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 174/423 (41%), Positives = 242/423 (57%), Gaps = 45/423 (10%)
Query: 319 VPSLSLLLCHVTLSTAADYYFDFDDLTGLEDADSAGIDLQRYYNSTE-LDAFILKTVKSY 377
+P+L LL + ++ A G + Q +Y S E L+ K+Y
Sbjct: 1 MPTLGLLFASIGIAVLA---MGVPHCRGYTIKEDESFLQQPHYASQEQLEDLFAGLEKAY 57
Query: 378 PHLVRAETIGKSVQGRNLWAVEITHDVDNPDGRTLMKPMFKYVANMHGDETVGYALMVFL 437
P+ + +G+S++GRNL A++I+ N R L+ P KY+ANMHGDETVG L+V++
Sbjct: 58 PNQAKVHFLGRSLEGRNLLALQISR---NTRSRNLLTPPVKYIANMHGDETVGRQLLVYM 114
Query: 438 IQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAHGVDLN 497
QYL+ + + QL+NSTDIY+VP++NPDG+A ++EG C+SL YVGR NA +DLN
Sbjct: 115 AQYLLGNHERISDLGQLVNSTDIYLVPTMNPDGYALSQEGNCESLPNYVGRGNAANIDLN 174
Query: 498 RNFPDQFEYE-----AKKVYEPETQAIMNFIYSNPFVLSGNLHGGAV------------- 539
R+FPD+ E + +PET A++N+I S PFVLS N HGGAV
Sbjct: 175 RDFPDRLEQSHVHQLRAQSRQPETAALVNWIVSKPFVLSANFHGGAVVASYPYDNSLAHN 234
Query: 540 -----------------ARDYASRNPMMAPGHACGFDFKDGITNGNYWYKVTGGMQDFNY 582
A Y+ +P+M G+ C F GITNG +WY+++GGMQDFNY
Sbjct: 235 ECCEESLTPDDRVFKQLAHTYSDNHPIMRKGNNCNDSFSGGITNGAHWYELSGGMQDFNY 294
Query: 583 VHSNCFEITMELSCCKYPKASDLKHYWAANKESLIKLIENVHRGVYGIVTDTYGNPLPSA 642
SNCFE+T+ELSCCKYP AS L W NK SL++L+ H G+ G+VTD G P+ A
Sbjct: 295 AFSNCFELTIELSCCKYPAASTLPQEWQRNKASLLQLLRQAHIGIKGLVTDASGFPIADA 354
Query: 643 IITVR-WNDKAVTVTNRGEYWRLLARGKYVVTASAPGYEPVTTEPLDVP--DTESVRLDF 699
+ V +K + + RGEYWRLL G Y V ASA GY+ + + V + E++RLDF
Sbjct: 355 NVYVAGLEEKPMRTSKRGEYWRLLTPGLYSVHASAFGYQTSAPQQVRVTNDNQEALRLDF 414
Query: 700 MLG 702
L
Sbjct: 415 KLA 417
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 63/129 (48%), Positives = 81/129 (62%), Gaps = 3/129 (2%)
Query: 172 MQDFNYVHSNCFEITMELSCCKYPKASDLKHYWAANKESLIKLIENVHRGVYGIVTDTYG 231
MQDFNY SNCFE+T+ELSCCKYP AS L W NK SL++L+ H G+ G+VTD G
Sbjct: 289 MQDFNYAFSNCFELTIELSCCKYPAASTLPQEWQRNKASLLQLLRQAHIGIKGLVTDASG 348
Query: 232 NPLPSAIITVR-WNDKAVTVTNRGEYWRLLARGKYVVTASAPGYEPVTTEPLDVP--DTE 288
P+ A + V +K + + RGEYWRLL G Y V ASA GY+ + + V + E
Sbjct: 349 FPIADANVYVAGLEEKPMRTSKRGEYWRLLTPGLYSVHASAFGYQTSAPQQVRVTNDNQE 408
Query: 289 SVRLDFMLG 297
++RLDF L
Sbjct: 409 ALRLDFKLA 417
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 96/164 (58%), Gaps = 7/164 (4%)
Query: 5 VPSLSLLLCHVTLSTAADYYFDFDDLTGLEDADSAGIDLQRYYNSTE-LDAFILKTVKSY 63
+P+L LL + ++ A G + Q +Y S E L+ K+Y
Sbjct: 1 MPTLGLLFASIGIAVLA---MGVPHCRGYTIKEDESFLQQPHYASQEQLEDLFAGLEKAY 57
Query: 64 PHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFL 123
P+ + +G+S++GRNL A++I+ + S R L+ P KY+ANMHGDETVG L+V++
Sbjct: 58 PNQAKVHFLGRSLEGRNLLALQISRNTRS---RNLLTPPVKYIANMHGDETVGRQLLVYM 114
Query: 124 IQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFAAAKEGNLNT 167
QYL+ + + QL+NSTDIY+VP++NPDG+A ++EGN +
Sbjct: 115 AQYLLGNHERISDLGQLVNSTDIYLVPTMNPDGYALSQEGNCES 158
>pdb|1UWY|A Chain A, Crystal Structure Of Human Carboxypeptidase M
Length = 426
Score = 290 bits (743), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 163/381 (42%), Positives = 221/381 (58%), Gaps = 47/381 (12%)
Query: 360 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDNPDGRTLMKPMFKY 419
Y+ ++AF+ ++Y + +IGKSV+GRNLW + + P + P FKY
Sbjct: 5 YHRQEGMEAFLKTVAQNYSSVTHLHSIGKSVKGRNLWVLVVGRF---PKEHRIGIPEFKY 61
Query: 420 VANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFAAAKEGKC 479
VANMHGDETVG L++ LI YLV DGKD IT L+NST I+I+PS+NPDGF A K+ C
Sbjct: 62 VANMHGDETVGRELLLHLIDYLVTSDGKDPEITNLINSTRIHIMPSMNPDGFEAVKKPDC 121
Query: 480 DSLDGYVGRKNAHGVDLNRNFPDQFEYEAKKVYEPETQAIMNFIYSNPFVLSGNLHGGAV 539
+GR+N + DLNRNFPD FEY +PET A+M ++ + FVLS NLHGGA+
Sbjct: 122 YY---SIGRENYNQYDLNRNFPDAFEYNNVS-RQPETVAVMKWLKTETFVLSANLHGGAL 177
Query: 540 -------------------------------ARDYASRNPMMAPGHACG--FDFKDGITN 566
A YASRNP M G C +F +G+TN
Sbjct: 178 VASYPFDNGVQATGALYSRSLTPDDDVFQYLAHTYASRNPNMKKGDECKNKMNFPNGVTN 237
Query: 567 GNYWYKVTGGMQDFNYVHSNCFEITMELSCCKYPKASDLKHYWAANKESLIKLIENVHRG 626
G WY + GGMQD+NY+ + CFEIT+ELSCCKYP+ L +W NK SLI+ I+ VH G
Sbjct: 238 GYSWYPLQGGMQDYNYIWAQCFEITLELSCCKYPREEKLPSFWNNNKASLIEYIKQVHLG 297
Query: 627 VYGIVTDTYGNPLPSAIITVRWNDKAVTV--TNR-GEYWRLLARGKYVVTASAPGYEPVT 683
V G V D GNPLP+ I+ V+ + K + TN+ GEY+ LL G Y++ + PG++P
Sbjct: 298 VKGQVFDQNGNPLPNVIVEVQ-DRKHICPYRTNKYGEYYLLLLPGSYIINVTVPGHDPHI 356
Query: 684 TE---PLDVPDTESVRLDFML 701
T+ P + +++ D +L
Sbjct: 357 TKVIIPEKSQNFSALKKDILL 377
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 76/117 (64%), Gaps = 3/117 (2%)
Query: 46 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKY 105
Y+ ++AF+ ++Y + +IGKSV+GRNLW + + P + P FKY
Sbjct: 5 YHRQEGMEAFLKTVAQNYSSVTHLHSIGKSVKGRNLWVLVVGR---FPKEHRIGIPEFKY 61
Query: 106 VANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFAAAKE 162
VANMHGDETVG L++ LI YLV DGKD IT L+NST I+I+PS+NPDGF A K+
Sbjct: 62 VANMHGDETVGRELLLHLIDYLVTSDGKDPEITNLINSTRIHIMPSMNPDGFEAVKK 118
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 61/155 (39%), Positives = 91/155 (58%), Gaps = 7/155 (4%)
Query: 169 QKRMQDFNYVHSNCFEITMELSCCKYPKASDLKHYWAANKESLIKLIENVHRGVYGIVTD 228
Q MQD+NY+ + CFEIT+ELSCCKYP+ L +W NK SLI+ I+ VH GV G V D
Sbjct: 245 QGGMQDYNYIWAQCFEITLELSCCKYPREEKLPSFWNNNKASLIEYIKQVHLGVKGQVFD 304
Query: 229 TYGNPLPSAIITVRWNDKAVTV--TNR-GEYWRLLARGKYVVTASAPGYEPVTTE---PL 282
GNPLP+ I+ V+ + K + TN+ GEY+ LL G Y++ + PG++P T+ P
Sbjct: 305 QNGNPLPNVIVEVQ-DRKHICPYRTNKYGEYYLLLLPGSYIINVTVPGHDPHITKVIIPE 363
Query: 283 DVPDTESVRLDFMLGKKNAFSIDQLKNPFIEIMTL 317
+ +++ D +L + + NP ++ L
Sbjct: 364 KSQNFSALKKDILLPFQGQLDSIPVSNPSCPMIPL 398
>pdb|1QMU|A Chain A, Duck Carboxypeptidase D Domain Ii
pdb|1H8L|A Chain A, Duck Carboxypeptidase D Domain Ii In Complex With Gemsa
Length = 380
Score = 286 bits (731), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 156/379 (41%), Positives = 226/379 (59%), Gaps = 42/379 (11%)
Query: 359 RYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDNPDGRTLMKPMFK 418
R+++ ++++ F+ + YP + R ++GKSV+ R L+ +EI+ DNP +P FK
Sbjct: 9 RHHHFSDMEIFLRRYANEYPSITRLYSVGKSVELRELYVMEIS---DNPGIHEAGEPEFK 65
Query: 419 YVANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFAAAKEGK 478
Y+ NMHG+E VG L++ LI+YL G D +T L+ ST I+I+PS+NPDG+ ++EG
Sbjct: 66 YIGNMHGNEVVGRELLLNLIEYLCKNFGTDPEVTDLVQSTRIHIMPSMNPDGYEKSQEG- 124
Query: 479 CDSLDGYVGRKNAHGVDLNRNFPDQFEYEAKKVYEPETQAIMNFIYSNPFVLSGNLHGGA 538
G VGR N++ DLNRNFPDQF ++ +PET A+M+++ + PFVLS NLHGG+
Sbjct: 125 --DRGGTVGRNNSNNYDLNRNFPDQF-FQVTDPPQPETLAVMSWLKTYPFVLSANLHGGS 181
Query: 539 ----------------------------VARDYASRNPMMAPGHACG-----FDFKDGIT 565
+A Y+ N M G C F GIT
Sbjct: 182 LVVNYPFDDDEQGIAIYSKSPDDAVFQQLALSYSKENKKMYQGSPCKDLYPTEYFPHGIT 241
Query: 566 NGNYWYKVTGGMQDFNYVHSNCFEITMELSCCKYPKASDLKHYWAANKESLIKLIENVHR 625
NG WY V GGMQD+NY+++NCFE+T+EL C KYPKA +L YW N+ SL++ I+ VHR
Sbjct: 242 NGAQWYNVPGGMQDWNYLNTNCFEVTIELGCVKYPKAEELPKYWEQNRRSLLQFIKQVHR 301
Query: 626 GVYGIVTD-TYGNPLPSAIITVRWNDKAVTVTNRGEYWRLLARGKYVVTASAPGYEPVTT 684
G++G V D T G + +A I+V + VT G+YWRLL +G Y VTASA GY+PV T
Sbjct: 302 GIWGFVLDATDGRGILNATISVADINHPVTTYKDGDYWRLLVQGTYKVTASARGYDPV-T 360
Query: 685 EPLDVPDTESVRLDFMLGK 703
+ ++V V+++F L +
Sbjct: 361 KTVEVDSKGGVQVNFTLSR 379
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/128 (47%), Positives = 88/128 (68%), Gaps = 2/128 (1%)
Query: 172 MQDFNYVHSNCFEITMELSCCKYPKASDLKHYWAANKESLIKLIENVHRGVYGIVTD-TY 230
MQD+NY+++NCFE+T+EL C KYPKA +L YW N+ SL++ I+ VHRG++G V D T
Sbjct: 253 MQDWNYLNTNCFEVTIELGCVKYPKAEELPKYWEQNRRSLLQFIKQVHRGIWGFVLDATD 312
Query: 231 GNPLPSAIITVRWNDKAVTVTNRGEYWRLLARGKYVVTASAPGYEPVTTEPLDVPDTESV 290
G + +A I+V + VT G+YWRLL +G Y VTASA GY+PV T+ ++V V
Sbjct: 313 GRGILNATISVADINHPVTTYKDGDYWRLLVQGTYKVTASARGYDPV-TKTVEVDSKGGV 371
Query: 291 RLDFMLGK 298
+++F L +
Sbjct: 372 QVNFTLSR 379
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 82/133 (61%), Gaps = 3/133 (2%)
Query: 45 RYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFK 104
R+++ ++++ F+ + YP + R ++GKSV+ R L+ +EI+ D+P +P FK
Sbjct: 9 RHHHFSDMEIFLRRYANEYPSITRLYSVGKSVELRELYVMEIS---DNPGIHEAGEPEFK 65
Query: 105 YVANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFAAAKEGN 164
Y+ NMHG+E VG L++ LI+YL G D +T L+ ST I+I+PS+NPDG+ ++EG+
Sbjct: 66 YIGNMHGNEVVGRELLLNLIEYLCKNFGTDPEVTDLVQSTRIHIMPSMNPDGYEKSQEGD 125
Query: 165 LNTKQKRMQDFNY 177
R NY
Sbjct: 126 RGGTVGRNNSNNY 138
>pdb|2NSM|A Chain A, Crystal Structure Of The Human Carboxypeptidase N
(kininase I) Catalytic Domain
Length = 439
Score = 262 bits (670), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 154/405 (38%), Positives = 222/405 (54%), Gaps = 57/405 (14%)
Query: 359 RYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDNPDGRTLMKPMFK 418
R++ +L + K P + R +IG+SV+GR+L+ +E + D+P ++P K
Sbjct: 5 RHHRYDDLVRTLYKVQNECPGITRVYSIGRSVEGRHLYVLEFS---DHPGIHEPLEPEVK 61
Query: 419 YVANMHGDETVGYALMVFLIQYLVLK-DGKDDRITQLLNSTDIYIVPSINPDGFAAAKEG 477
YV NMHG+E +G LM+ L ++L + ++ RI QL+ T I+I+PS+NPDG+ A
Sbjct: 62 YVGNMHGNEALGRELMLQLSEFLCEEFRNRNQRIVQLIQDTRIHILPSMNPDGYEVAAAQ 121
Query: 478 KCDSLDGYVGRKNAHGVDLNRNFPDQFEY------------------EAKKVYEPETQAI 519
+ VGR NA+GVDLNRNFPD Y K EPET+A+
Sbjct: 122 GPNKPGYLVGRNNANGVDLNRNFPDLNTYIYYNEKYGGPNHHLPLPDNWKSQVEPETRAV 181
Query: 520 MNFIYSNPFVLSGNLHGGAV----------------------------------ARDYAS 545
+ +++S FVLS NLHGGAV A+ Y+
Sbjct: 182 IRWMHSFNFVLSANLHGGAVVANYPYDKSFEHRVRGVRRTASTPTPDDKLFQKLAKVYSY 241
Query: 546 RNPMMAPGHACGFDFKDGITNGNYWYKVTGGMQDFNYVHSNCFEITMELSCCKYPKASDL 605
+ M G CG F DGITNG WY ++ GMQDFNY+H+NCFEIT+ELSC K+P +L
Sbjct: 242 AHGWMFQGWNCGDYFPDGITNGASWYSLSKGMQDFNYLHTNCFEITLELSCDKFPPEEEL 301
Query: 606 KHYWAANKESLIKLIENVHRGVYGIVTDTYGNPLPSAIITVRWNDKAVTVTNRGEYWRLL 665
+ W NKE+LI+ +E VH+G+ G+V D N L +A+I+V + VT + G+Y+RLL
Sbjct: 302 QREWLGNKEALIQFLEQVHQGIKGMVLDQNYNNLANAVISVSGINHDVTSGDHGDYFRLL 361
Query: 666 ARGKYVVTASAPGYEPVTTEPLDVPDTESVRLDFMLGKKNAFVTP 710
G Y V+A+APGY+P T + V E ++F L + V+P
Sbjct: 362 LPGIYTVSATAPGYDPETVT-VTVGPAEPTLVNFHLKRSIPQVSP 405
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 86/129 (66%), Gaps = 1/129 (0%)
Query: 170 KRMQDFNYVHSNCFEITMELSCCKYPKASDLKHYWAANKESLIKLIENVHRGVYGIVTDT 229
K MQDFNY+H+NCFEIT+ELSC K+P +L+ W NKE+LI+ +E VH+G+ G+V D
Sbjct: 271 KGMQDFNYLHTNCFEITLELSCDKFPPEEELQREWLGNKEALIQFLEQVHQGIKGMVLDQ 330
Query: 230 YGNPLPSAIITVRWNDKAVTVTNRGEYWRLLARGKYVVTASAPGYEPVTTEPLDVPDTES 289
N L +A+I+V + VT + G+Y+RLL G Y V+A+APGY+P T + V E
Sbjct: 331 NYNNLANAVISVSGINHDVTSGDHGDYFRLLLPGIYTVSATAPGYDPETVT-VTVGPAEP 389
Query: 290 VRLDFMLGK 298
++F L +
Sbjct: 390 TLVNFHLKR 398
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 73/121 (60%), Gaps = 5/121 (4%)
Query: 45 RYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFK 104
R++ +L + K P + R +IG+SV+GR+L+ +E + D P ++P K
Sbjct: 5 RHHRYDDLVRTLYKVQNECPGITRVYSIGRSVEGRHLYVLEFS---DHPGIHEPLEPEVK 61
Query: 105 YVANMHGDETVGYALMVFLIQYLVLK-DGKDDRITQLLNSTDIYIVPSINPDGF-AAAKE 162
YV NMHG+E +G LM+ L ++L + ++ RI QL+ T I+I+PS+NPDG+ AA +
Sbjct: 62 YVGNMHGNEALGRELMLQLSEFLCEEFRNRNQRIVQLIQDTRIHILPSMNPDGYEVAAAQ 121
Query: 163 G 163
G
Sbjct: 122 G 122
>pdb|3V38|A Chain A, Carboxypeptidase T Mutant L254n
Length = 326
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 89/190 (46%), Gaps = 34/190 (17%)
Query: 360 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDNPDGRTLMKPMFKY 419
Y+N E+ I +YP++V+ +IGKS +GR LWAV+I+ +V G +P Y
Sbjct: 9 YHNYNEMVNKINTVASNYPNIVKKFSIGKSYEGRELWAVKISDNV----GTDENEPEVLY 64
Query: 420 VANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFAAAKEGKC 479
A H E + + ++ + D RIT L+N+ +IYIV +INPDG G+
Sbjct: 65 TALHHAREHLTVEMALYTLDLFTQNYNLDSRITNLVNNREIYIVFNINPDG------GEY 118
Query: 480 DSLDGYVG--RKNAH--------GVDLNRNFPDQFE-------------YEAKKVYE-PE 515
D G RKN G DLNRN+ ++ Y + + PE
Sbjct: 119 DISSGSYKSWRKNRQPNSGSSYVGTDLNRNYGYKWGCCGGSSGSPSSETYRGRSAFSAPE 178
Query: 516 TQAIMNFIYS 525
T A+ +FI S
Sbjct: 179 TAAMRDFINS 188
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Query: 46 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKY 105
Y+N E+ I +YP++V+ +IGKS +GR LWAV+I+ +V G +P Y
Sbjct: 9 YHNYNEMVNKINTVASNYPNIVKKFSIGKSYEGRELWAVKISDNV----GTDENEPEVLY 64
Query: 106 VANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDG 156
A H E + + ++ + D RIT L+N+ +IYIV +INPDG
Sbjct: 65 TALHHAREHLTVEMALYTLDLFTQNYNLDSRITNLVNNREIYIVFNINPDG 115
>pdb|3PRT|A Chain A, Mutant Of The Carboxypeptidase T
Length = 323
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 125/314 (39%), Gaps = 64/314 (20%)
Query: 360 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDNPDGRTLMKPMFKY 419
Y+N E+ I +YP++V+ +IGKS +GR LWAV+I+ +V G +P Y
Sbjct: 9 YHNYNEMVNKINTVASNYPNIVKKFSIGKSYEGRELWAVKISDNV----GTDENEPEVLY 64
Query: 420 VANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFAAAKEGKC 479
A H E + + ++ + D RIT L+N+ +IYIV +INPDG G+
Sbjct: 65 TALHHAREHLTVEMALYTLDLFTQNYNLDSRITNLVNNREIYIVFNINPDG------GEY 118
Query: 480 DSLDGYVG--RKNAH--------GVDLNRNFPDQFE-------------YEAKKVYE-PE 515
D G RKN G DLNRN+ ++ Y + + PE
Sbjct: 119 DISSGSYKSWRKNRQPNSGSSYVGTDLNRNYGYKWGCCGGSSGSPSSETYRGRSAFSAPE 178
Query: 516 TQAIMNFIYSNPFVLSGNLHGGAVARDYASRNPMMAPGHACGFDFKDGIT---------- 565
T A+ +FI N V+ G + + ++ P D +T
Sbjct: 179 TAAMRDFI--NSRVVGGKQQIKTLITFHTYSELILYPYSYTYTDVPSDMTQDDFNVFKTM 236
Query: 566 -------------NGNYWYKVTGGMQDFNYVHSNCFEITMELSCCK-----YPKASDLKH 607
G+ Y GGM D+ Y F T E+ YP +
Sbjct: 237 ANTMAQTNGYTPQQGSDLYIADGGMDDWAYGQHKIFAFTFEMYPTSYNPGFYPPDEVIGR 296
Query: 608 YWAANKESLIKLIE 621
+ NKE+++ + E
Sbjct: 297 ETSRNKEAVLYVAE 310
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Query: 46 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKY 105
Y+N E+ I +YP++V+ +IGKS +GR LWAV+I+ +V G +P Y
Sbjct: 9 YHNYNEMVNKINTVASNYPNIVKKFSIGKSYEGRELWAVKISDNV----GTDENEPEVLY 64
Query: 106 VANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDG 156
A H E + + ++ + D RIT L+N+ +IYIV +INPDG
Sbjct: 65 TALHHAREHLTVEMALYTLDLFTQNYNLDSRITNLVNNREIYIVFNINPDG 115
>pdb|1OBR|A Chain A, Carboxypeptidase T
pdb|3V7Z|A Chain A, Carboxypeptidase T With Gemsa
pdb|4DUK|A Chain A, Carboxypeptidase T With L-benzylsuccinic Acid
Length = 326
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 89/190 (46%), Gaps = 34/190 (17%)
Query: 360 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDNPDGRTLMKPMFKY 419
Y+N E+ I +YP++V+ +IGKS +GR LWAV+I+ +V G +P Y
Sbjct: 9 YHNYNEMVNKINTVASNYPNIVKKFSIGKSYEGRELWAVKISDNV----GTDENEPEVLY 64
Query: 420 VANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFAAAKEGKC 479
A H E + + ++ + D RIT L+N+ +IYIV +INPDG G+
Sbjct: 65 TALHHAREHLTVEMALYTLDLFTQNYNLDSRITNLVNNREIYIVFNINPDG------GEY 118
Query: 480 DSLDGYVG--RKNAH--------GVDLNRNFPDQFE-------------YEAKKVYE-PE 515
D G RKN G DLNRN+ ++ Y + + PE
Sbjct: 119 DISSGSYKSWRKNRQPNSGSSYVGTDLNRNYGYKWGCCGGSSGSPSSETYRGRSAFSAPE 178
Query: 516 TQAIMNFIYS 525
T A+ +FI S
Sbjct: 179 TAAMRDFINS 188
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Query: 46 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKY 105
Y+N E+ I +YP++V+ +IGKS +GR LWAV+I+ +V G +P Y
Sbjct: 9 YHNYNEMVNKINTVASNYPNIVKKFSIGKSYEGRELWAVKISDNV----GTDENEPEVLY 64
Query: 106 VANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDG 156
A H E + + ++ + D RIT L+N+ +IYIV +INPDG
Sbjct: 65 TALHHAREHLTVEMALYTLDLFTQNYNLDSRITNLVNNREIYIVFNINPDG 115
>pdb|3QNV|A Chain A, Carboxypeptidase T
pdb|4DJL|A Chain A, Carboxypeptidase T With N-sulfamoyl-l-phenylalanine
Length = 323
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 89/190 (46%), Gaps = 34/190 (17%)
Query: 360 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDNPDGRTLMKPMFKY 419
Y+N E+ I +YP++V+ +IGKS +GR LWAV+I+ +V G +P Y
Sbjct: 9 YHNYNEMVNKINTVASNYPNIVKKFSIGKSYEGRELWAVKISDNV----GTDENEPEVLY 64
Query: 420 VANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFAAAKEGKC 479
A H E + + ++ + D RIT L+N+ +IYIV +INPDG G+
Sbjct: 65 TALHHAREHLTVEMALYTLDLFTQNYNLDSRITNLVNNREIYIVFNINPDG------GEY 118
Query: 480 DSLDGYVG--RKNAH--------GVDLNRNFPDQFE-------------YEAKKVYE-PE 515
D G RKN G DLNRN+ ++ Y + + PE
Sbjct: 119 DISSGSYKSWRKNRQPNSGSSYVGTDLNRNYGYKWGCCGGSSGSPSSETYRGRSAFSAPE 178
Query: 516 TQAIMNFIYS 525
T A+ +FI S
Sbjct: 179 TAAMRDFINS 188
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 61/111 (54%), Gaps = 4/111 (3%)
Query: 46 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKY 105
Y+N E+ I +YP++V+ +IGKS +GR LWAV+I+ +V G +P Y
Sbjct: 9 YHNYNEMVNKINTVASNYPNIVKKFSIGKSYEGRELWAVKISDNV----GTDENEPEVLY 64
Query: 106 VANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDG 156
A H E + + ++ + D RIT L+N+ +IYIV +INPDG
Sbjct: 65 TALHHAREHLTVEMALYTLDLFTQNYNLDSRITNLVNNREIYIVFNINPDG 115
>pdb|1JQG|A Chain A, Crystal Structure Of The Carboxypeptidase A From
Helicoverpa Armigera
Length = 433
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 112/276 (40%), Gaps = 44/276 (15%)
Query: 355 IDLQRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDNPDGRTLMK 414
+ + ++ E+DA++ + K +P++V GKS +GR++ + I+ + + K
Sbjct: 116 LSFDKIHSYEEVDAYLQELAKEFPNVVTVVEGGKSFEGRSIKYLRIS----TTNFQDASK 171
Query: 415 PMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDG---- 470
P+ + +H E V ++ I LV+ + D L+N+ D I+P NPDG
Sbjct: 172 PVVMMQSLLHCREWVTLPATLYAIHKLVIDVTESD----LINNIDWIILPVANPDGYVHT 227
Query: 471 FAAAKEGKCDSLDGYVGRKNAHGVDLNRNFPDQF-----------EYEAKKVY-EPETQA 518
F + + + GY+ GVDLNRNF + + + + EPE+
Sbjct: 228 FGGDRYWRKNRATGYMAGNLCMGVDLNRNFGMNWGTASSSSVCSDTFHGRSAFSEPESSV 287
Query: 519 IMNFI--YSNPFVLSGNLHGGAVARDYASRNPMMAPG----HACGFDFKDGI------TN 566
I + I + N L ++H Y N ++ H G I +N
Sbjct: 288 IRDIIAEHRNRMALYLDIHSFGSMILYGYGNGVLPSNALQLHLIGVQMAQAIDRVKWSSN 347
Query: 567 GNY--------WYKVTGGMQDFNYVHSNCFEITMEL 594
+Y Y +GG D+ + F T EL
Sbjct: 348 KDYIVGNIFHVLYAASGGASDYAMQAAAPFSYTYEL 383
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 65/131 (49%), Gaps = 8/131 (6%)
Query: 41 IDLQRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMK 100
+ + ++ E+DA++ + K +P++V GKS +GR++ + I+ + + + K
Sbjct: 116 LSFDKIHSYEEVDAYLQELAKEFPNVVTVVEGGKSFEGRSIKYLRIS----TTNFQDASK 171
Query: 101 PMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFAAA 160
P+ + +H E V ++ I LV+ + D L+N+ D I+P NPDG+
Sbjct: 172 PVVMMQSLLHCREWVTLPATLYAIHKLVIDVTESD----LINNIDWIILPVANPDGYVHT 227
Query: 161 KEGNLNTKQKR 171
G+ ++ R
Sbjct: 228 FGGDRYWRKNR 238
>pdb|1AYE|A Chain A, Human Procarboxypeptidase A2
Length = 401
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 91/238 (38%), Gaps = 13/238 (5%)
Query: 272 PGYEPVTTEPLDVPDTESVRLDFMLGKKNAFSIDQLKNPFIEIMTLIVPSLSLLLCHVTL 331
P E L + E ++LDF ++ PF+ + + V S + + +
Sbjct: 14 PSNEEQIKNLLQLEAQEHLQLDFWKSPTTPGETAHVRVPFVNVQAVKVFLESQGIAYSIM 73
Query: 332 STAADYYFDFDD---LTGLEDADSAGIDLQRYYNSTELDAFILKTVKSYPHLVRAETIGK 388
D ++ L S + Y+ E+ + V +P LV IG
Sbjct: 74 IEDVQVLLDKENEEMLFNRRRERSGNFNFGAYHTLEEISQEMDNLVAEHPGLVSKVNIGS 133
Query: 389 SVQGRNLWAVEITHDVDNPDGRTLMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKD 448
S + R + ++ + D KP A +H E V A ++ +V GKD
Sbjct: 134 SFENRPMNVLKFSTGGD--------KPAIWLDAGIHAREWVTQATALWTANKIVSDYGKD 185
Query: 449 DRITQLLNSTDIYIVPSINPDG--FAAAKEGKCDSLDGYVGRKNAHGVDLNRNFPDQF 504
IT +L++ DI+++P NPDG F+ K V GVD NRN+ F
Sbjct: 186 PSITSILDALDIFLLPVTNPDGYVFSQTKNRMWRKTRSKVSGSLCVGVDPNRNWDAGF 243
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 8/134 (5%)
Query: 38 SAGIDLQRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRT 97
S + Y+ E+ + V +P LV IG S + R + ++ + D
Sbjct: 97 SGNFNFGAYHTLEEISQEMDNLVAEHPGLVSKVNIGSSFENRPMNVLKFSTGGD------ 150
Query: 98 LMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGF 157
KP A +H E V A ++ +V GKD IT +L++ DI+++P NPDG+
Sbjct: 151 --KPAIWLDAGIHAREWVTQATALWTANKIVSDYGKDPSITSILDALDIFLLPVTNPDGY 208
Query: 158 AAAKEGNLNTKQKR 171
++ N ++ R
Sbjct: 209 VFSQTKNRMWRKTR 222
>pdb|1Z5R|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
pdb|1Z5R|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
pdb|1Z5R|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
pdb|1ZG7|A Chain A, Crystal Structure Of 2-(5-{[amino(Imino)methyl]amino}-2-
Chlorophenyl)-3-Sulfanylpropanoic Acid Bound To
Activated Porcine Pancreatic Carboxypeptidase B
pdb|1ZG7|B Chain B, Crystal Structure Of 2-(5-{[amino(Imino)methyl]amino}-2-
Chlorophenyl)-3-Sulfanylpropanoic Acid Bound To
Activated Porcine Pancreatic Carboxypeptidase B
pdb|1ZG7|C Chain C, Crystal Structure Of 2-(5-{[amino(Imino)methyl]amino}-2-
Chlorophenyl)-3-Sulfanylpropanoic Acid Bound To
Activated Porcine Pancreatic Carboxypeptidase B
pdb|1ZG8|A Chain A, Crystal Structure Of (R)-2-(3-{[amino(Imino)
Methyl]amino}phenyl)-3-Sulfanylpropanoic Acid Bound To
Activated Porcine Pancreatic Carboxypeptidase B
pdb|1ZG8|B Chain B, Crystal Structure Of (R)-2-(3-{[amino(Imino)
Methyl]amino}phenyl)-3-Sulfanylpropanoic Acid Bound To
Activated Porcine Pancreatic Carboxypeptidase B
pdb|1ZG8|C Chain C, Crystal Structure Of (R)-2-(3-{[amino(Imino)
Methyl]amino}phenyl)-3-Sulfanylpropanoic Acid Bound To
Activated Porcine Pancreatic Carboxypeptidase B
pdb|1ZG9|A Chain A, Crystal Structure Of 5-{[amino(Imino)methyl]amino}-2-
(Sulfanylmethyl)pentanoic Acid Bound To Activated
Porcine Pancreatic Carboxypeptidase B
pdb|1ZG9|B Chain B, Crystal Structure Of 5-{[amino(Imino)methyl]amino}-2-
(Sulfanylmethyl)pentanoic Acid Bound To Activated
Porcine Pancreatic Carboxypeptidase B
pdb|1ZG9|C Chain C, Crystal Structure Of 5-{[amino(Imino)methyl]amino}-2-
(Sulfanylmethyl)pentanoic Acid Bound To Activated
Porcine Pancreatic Carboxypeptidase B
pdb|2JEW|A Chain A, Crystal Structure Of ( (2s)-5-Amino-2-((1-N-Propyl-1h-
Imidazol-4-Yl)methyl)pentanoic Acid) Uk396,082 A Tafia
Inhibitor, Bound To Activated Porcine Pancreatic
Carboxypeptidaseb
pdb|2PIY|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
(S)-2-(3-Aminomethyl-Phenyl)-3-{hydroxy-
[(R)-2-Methyl-1-(3-Phenyl-Propane-1-Sulfonylamino)-
Propyl]- Phosphinoyl}-Propionic Acid {zk 528} Complex
pdb|2PIY|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
(S)-2-(3-Aminomethyl-Phenyl)-3-{hydroxy-
[(R)-2-Methyl-1-(3-Phenyl-Propane-1-Sulfonylamino)-
Propyl]- Phosphinoyl}-Propionic Acid {zk 528} Complex
pdb|2PIY|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
(S)-2-(3-Aminomethyl-Phenyl)-3-{hydroxy-
[(R)-2-Methyl-1-(3-Phenyl-Propane-1-Sulfonylamino)-
Propyl]- Phosphinoyl}-Propionic Acid {zk 528} Complex
pdb|2PIZ|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Guanidino-Phenyl)-3-[hydroxy-(3-
Phenyl-Propyl)-Phosphinoyl]-Propionic Acid Complex
pdb|2PIZ|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Guanidino-Phenyl)-3-[hydroxy-(3-
Phenyl-Propyl)-Phosphinoyl]-Propionic Acid Complex
pdb|2PIZ|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Guanidino-Phenyl)-3-[hydroxy-(3-
Phenyl-Propyl)-Phosphinoyl]-Propionic Acid Complex
pdb|2PJ0|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
[((R)-1-Benzyloxycarbonylamino-2-Methyl-
Propyl)-Hydroxy-Phosphinoyloxy]-(3-Guanidino-Phenyl)-
Acetic Acid Complex
pdb|2PJ0|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
[((R)-1-Benzyloxycarbonylamino-2-Methyl-
Propyl)-Hydroxy-Phosphinoyloxy]-(3-Guanidino-Phenyl)-
Acetic Acid Complex
pdb|2PJ0|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
[((R)-1-Benzyloxycarbonylamino-2-Methyl-
Propyl)-Hydroxy-Phosphinoyloxy]-(3-Guanidino-Phenyl)-
Acetic Acid Complex
pdb|2PJ1|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B (3-aminomethyl-phenyl)-[((r)-1-
Benzyloxycarbonylamino-2-methyl-propyl)-hydroxy-
Phosphinoyloxy]-acetic Acid Complex
pdb|2PJ1|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B (3-aminomethyl-phenyl)-[((r)-1-
Benzyloxycarbonylamino-2-methyl-propyl)-hydroxy-
Phosphinoyloxy]-acetic Acid Complex
pdb|2PJ1|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B (3-aminomethyl-phenyl)-[((r)-1-
Benzyloxycarbonylamino-2-methyl-propyl)-hydroxy-
Phosphinoyloxy]-acetic Acid Complex
pdb|2PJ2|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Aminomethyl-Phenyl)-3-[((R)-1-
Benzyloxycarbonylamino-2-Methyl-Propyl)-Hydroxy-
Phosphinoyl]-Propionic Acid Complex
pdb|2PJ2|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Aminomethyl-Phenyl)-3-[((R)-1-
Benzyloxycarbonylamino-2-Methyl-Propyl)-Hydroxy-
Phosphinoyl]-Propionic Acid Complex
pdb|2PJ2|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Aminomethyl-Phenyl)-3-[((R)-1-
Benzyloxycarbonylamino-2-Methyl-Propyl)-Hydroxy-
Phosphinoyl]-Propionic Acid Complex
pdb|2PJ3|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B (3-Guanidino-Phenyl)-{hydroxy-[(R)-2-
Methyl-1-(3-Phenyl-Propionylamino)-Propyl]-
Phosphinoyloxy}- Acetic Acid Complex
pdb|2PJ3|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B (3-Guanidino-Phenyl)-{hydroxy-[(R)-2-
Methyl-1-(3-Phenyl-Propionylamino)-Propyl]-
Phosphinoyloxy}- Acetic Acid Complex
pdb|2PJ3|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B (3-Guanidino-Phenyl)-{hydroxy-[(R)-2-
Methyl-1-(3-Phenyl-Propionylamino)-Propyl]-
Phosphinoyloxy}- Acetic Acid Complex
pdb|2PJ4|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
[((R)-Benzyloxycarbonylamino-Cyclohexyl-
Methyl)-Hydroxy-Phosphinoyloxy]-(3-Guanidino-Phenyl)-
Acetic Acid Complex
pdb|2PJ4|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
[((R)-Benzyloxycarbonylamino-Cyclohexyl-
Methyl)-Hydroxy-Phosphinoyloxy]-(3-Guanidino-Phenyl)-
Acetic Acid Complex
pdb|2PJ5|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
[((R)-1-Benzyloxycarbonylamino-Hexyl)-
Hydroxy-Phosphinoyloxy]-(3-Guanidino-Phenyl)-Acetic Acid
Complex
pdb|2PJ5|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
[((R)-1-Benzyloxycarbonylamino-Hexyl)-
Hydroxy-Phosphinoyloxy]-(3-Guanidino-Phenyl)-Acetic Acid
Complex
pdb|2PJ5|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
[((R)-1-Benzyloxycarbonylamino-Hexyl)-
Hydroxy-Phosphinoyloxy]-(3-Guanidino-Phenyl)-Acetic Acid
Complex
pdb|2PJ6|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Aminomethyl-Phenyl)-3-{hydroxy-
[(R)-2-Methyl-1-(2-Phenyl-Ethanesulfonylamino)-Propyl]-
Phosphinoyl}-Propionic Acid Complex
pdb|2PJ7|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Aminomethyl-Phenyl)-3-[((R)-1-
Benzenesulfonylamino-2-Methyl-Propyl)-Hydroxy-
Phosphinoyl]- Propionic Acid Complex
pdb|2PJ7|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Aminomethyl-Phenyl)-3-[((R)-1-
Benzenesulfonylamino-2-Methyl-Propyl)-Hydroxy-
Phosphinoyl]- Propionic Acid Complex
pdb|2PJ7|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Aminomethyl-Phenyl)-3-[((R)-1-
Benzenesulfonylamino-2-Methyl-Propyl)-Hydroxy-
Phosphinoyl]- Propionic Acid Complex
pdb|2PJ8|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Aminomethyl-Phenyl)-3-{[(R)-1-
(Biphenyl-4-Sulfonylamino)-2-Methyl-Propyl]-Hydroxy-
Phosphinoyl}-Propionic Acid Complex
pdb|2PJ8|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Aminomethyl-Phenyl)-3-{[(R)-1-
(Biphenyl-4-Sulfonylamino)-2-Methyl-Propyl]-Hydroxy-
Phosphinoyl}-Propionic Acid Complex
pdb|2PJ8|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Aminomethyl-Phenyl)-3-{[(R)-1-
(Biphenyl-4-Sulfonylamino)-2-Methyl-Propyl]-Hydroxy-
Phosphinoyl}-Propionic Acid Complex
pdb|2PJ9|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Aminomethyl-Phenyl)-3-{[(R)-1-
(Benzo[1,2,
5]thiadiazole-4-Sulfonylamino)-2-Methyl-Propyl]-
Hydroxy-Phosphinoyl}-Propionic Acid Complex
pdb|2PJA|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
3-{[(R)-1-((S)-2-Benzyloxycarbonylamino-
3-Phenyl-Propionylamino)-2-Methyl-Propyl]-Hydroxy-
Phosphinoyl}-2-(3-Guanidino-Phenyl)-Propionic Acid
Complex
pdb|2PJA|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
3-{[(R)-1-((S)-2-Benzyloxycarbonylamino-
3-Phenyl-Propionylamino)-2-Methyl-Propyl]-Hydroxy-
Phosphinoyl}-2-(3-Guanidino-Phenyl)-Propionic Acid
Complex
pdb|2PJA|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
3-{[(R)-1-((S)-2-Benzyloxycarbonylamino-
3-Phenyl-Propionylamino)-2-Methyl-Propyl]-Hydroxy-
Phosphinoyl}-2-(3-Guanidino-Phenyl)-Propionic Acid
Complex
pdb|2PJB|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
2-(3-aminomethyl-phenyl)-3-{[1-((s)-2-
Benzyloxycarbonylamino-3-phenyl-propane-1-
sulfonylamino)-2-
Methyl-propyl]-hydroxy-phosphinoyl}-propionic Acid
Complex
pdb|2PJB|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
2-(3-aminomethyl-phenyl)-3-{[1-((s)-2-
Benzyloxycarbonylamino-3-phenyl-propane-1-
sulfonylamino)-2-
Methyl-propyl]-hydroxy-phosphinoyl}-propionic Acid
Complex
pdb|2PJB|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
2-(3-aminomethyl-phenyl)-3-{[1-((s)-2-
Benzyloxycarbonylamino-3-phenyl-propane-1-
sulfonylamino)-2-
Methyl-propyl]-hydroxy-phosphinoyl}-propionic Acid
Complex
pdb|2PJC|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
({(R)-1-[(S)-2-Benzyloxycarbonylamino-3-
(4-Hydroxy-Phenyl)-Propionylamino]-2-Methyl-Propyl}-
Hydroxy-Phosphinoyloxy)-(3-Guanidino-Phenyl)-Acetic Acid
Complex
pdb|2PJC|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
({(R)-1-[(S)-2-Benzyloxycarbonylamino-3-
(4-Hydroxy-Phenyl)-Propionylamino]-2-Methyl-Propyl}-
Hydroxy-Phosphinoyloxy)-(3-Guanidino-Phenyl)-Acetic Acid
Complex
pdb|2PJC|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
({(R)-1-[(S)-2-Benzyloxycarbonylamino-3-
(4-Hydroxy-Phenyl)-Propionylamino]-2-Methyl-Propyl}-
Hydroxy-Phosphinoyloxy)-(3-Guanidino-Phenyl)-Acetic Acid
Complex
Length = 306
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 75/190 (39%), Gaps = 22/190 (11%)
Query: 352 SAGIDLQRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDNPDGRT 411
+ G ++Y N ++A+ + P L+ IG + G N++ +++ N
Sbjct: 1 TTGHSYEKYNNWETIEAWTKQVTSENPDLISRTAIGTTFLGNNIYLLKVGKPGPN----- 55
Query: 412 LMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDG- 470
KP H E + +A + ++ VL G + +T+ LN D Y++P +N DG
Sbjct: 56 --KPAIFMDCGFHAREWISHAFCQWFVREAVLTYGYESHMTEFLNKLDFYVLPVLNIDGY 113
Query: 471 -FAAAKEGKCDSLDGYVGRKNAHGVDLNRNFP-------------DQFEYEAKKVYEPET 516
+ K G D NRNF D+ + E ET
Sbjct: 114 IYTWTKNRMWRKTRSTNAGTTCIGTDPNRNFDAGWCTTGASTDPCDETYCGSAAESEKET 173
Query: 517 QAIMNFIYSN 526
+A+ +FI +N
Sbjct: 174 KALADFIRNN 183
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 55/120 (45%), Gaps = 7/120 (5%)
Query: 38 SAGIDLQRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRT 97
+ G ++Y N ++A+ + P L+ IG + G N++ +++ P+
Sbjct: 1 TTGHSYEKYNNWETIEAWTKQVTSENPDLISRTAIGTTFLGNNIYLLKVGKP--GPN--- 55
Query: 98 LMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGF 157
KP H E + +A + ++ VL G + +T+ LN D Y++P +N DG+
Sbjct: 56 --KPAIFMDCGFHAREWISHAFCQWFVREAVLTYGYESHMTEFLNKLDFYVLPVLNIDGY 113
>pdb|1ZLI|A Chain A, Crystal Structure Of The Tick Carboxypeptidase Inhibitor
In Complex With Human Carboxypeptidase B
Length = 309
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 56/120 (46%), Gaps = 7/120 (5%)
Query: 352 SAGIDLQRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDNPDGRT 411
+ G ++Y N ++A+ + P L+ IG + +GR ++ +++ N
Sbjct: 3 ATGHSYEKYNNWETIEAWTQQVATENPALISRSVIGTTFEGRAIYLLKVGKAGQN----- 57
Query: 412 LMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGF 471
KP H E + A + ++ V G++ ++T+LLN D Y++P +N DG+
Sbjct: 58 --KPAIFMDCGFHAREWISPAFCQWFVREAVRTYGREIQVTELLNKLDFYVLPVLNIDGY 115
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 56/120 (46%), Gaps = 7/120 (5%)
Query: 38 SAGIDLQRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRT 97
+ G ++Y N ++A+ + P L+ IG + +GR ++ +++ +
Sbjct: 3 ATGHSYEKYNNWETIEAWTQQVATENPALISRSVIGTTFEGRAIYLLKVGKAGQN----- 57
Query: 98 LMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGF 157
KP H E + A + ++ V G++ ++T+LLN D Y++P +N DG+
Sbjct: 58 --KPAIFMDCGFHAREWISPAFCQWFVREAVRTYGREIQVTELLNKLDFYVLPVLNIDGY 115
>pdb|3GLJ|A Chain A, A Polymorph Of Carboxypeptidase B Zymogen Structure
Length = 401
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 75/190 (39%), Gaps = 22/190 (11%)
Query: 352 SAGIDLQRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDNPDGRT 411
+ G ++Y N ++A+ + P L+ IG + G N++ +++ N
Sbjct: 96 TTGHSYEKYNNWETIEAWTKQVTSENPDLISRTAIGTTFLGNNIYLLKVGKPGPN----- 150
Query: 412 LMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDG- 470
KP H E + +A + ++ VL G + +T+ LN D Y++P +N DG
Sbjct: 151 --KPAIFMDCGFHAREWISHAFCQWFVREAVLTYGYESHMTEFLNKLDFYVLPVLNIDGY 208
Query: 471 -FAAAKEGKCDSLDGYVGRKNAHGVDLNRNFP-------------DQFEYEAKKVYEPET 516
+ K G D NRNF D+ + E ET
Sbjct: 209 IYTWTKNRMWRKTRSTNAGTTCIGTDPNRNFDAGWCTTGASTDPCDETYCGSAAESEKET 268
Query: 517 QAIMNFIYSN 526
+A+ +FI +N
Sbjct: 269 KALADFIRNN 278
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 55/120 (45%), Gaps = 7/120 (5%)
Query: 38 SAGIDLQRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRT 97
+ G ++Y N ++A+ + P L+ IG + G N++ +++ P+
Sbjct: 96 TTGHSYEKYNNWETIEAWTKQVTSENPDLISRTAIGTTFLGNNIYLLKVGKP--GPN--- 150
Query: 98 LMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGF 157
KP H E + +A + ++ VL G + +T+ LN D Y++P +N DG+
Sbjct: 151 --KPAIFMDCGFHAREWISHAFCQWFVREAVLTYGYESHMTEFLNKLDFYVLPVLNIDGY 208
>pdb|3D4U|A Chain A, Bovine Thrombin-Activatable Fibrinolysis Inhibitor (Tafia)
In Complex With Tick-Derived Carboxypeptidase Inhibitor
Length = 309
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 80/185 (43%), Gaps = 22/185 (11%)
Query: 358 QRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDNPDGRTLMKPMF 417
++Y++ E+ ++I + YP +V IG S + L+ ++++ +
Sbjct: 7 EQYHSLNEIYSWIEVMTERYPDMVEKIHIGSSYEKYPLYVLKVSKKEQRAKNAMWID--- 63
Query: 418 KYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGF-AAAKE 476
+H E + A ++ + + GK+ T LL D YI+P +N DG+ K+
Sbjct: 64 ---CGIHAREWISPAFCLWFVGSVTYYYGKEKMHTNLLKHMDFYIMPVVNVDGYDYTWKK 120
Query: 477 GKCDSLDGYVGRKNAH-GVDLNRNFPDQF-------EYEAKKVY-------EPETQAIMN 521
+ + + KNA G DLNRNF + ++Y EPE +A+ +
Sbjct: 121 DRMWRKNRSLHEKNACVGTDLNRNFASKHWCGEGASSSSCSEIYCGTYPESEPEVKAVAD 180
Query: 522 FIYSN 526
F+ N
Sbjct: 181 FLRRN 185
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/134 (20%), Positives = 59/134 (44%), Gaps = 7/134 (5%)
Query: 44 QRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMF 103
++Y++ E+ ++I + YP +V IG S + L+ ++++ +
Sbjct: 7 EQYHSLNEIYSWIEVMTERYPDMVEKIHIGSSYEKYPLYVLKVSKKEQRAKNAMWID--- 63
Query: 104 KYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGF-AAAKE 162
+H E + A ++ + + GK+ T LL D YI+P +N DG+ K+
Sbjct: 64 ---CGIHAREWISPAFCLWFVGSVTYYYGKEKMHTNLLKHMDFYIMPVVNVDGYDYTWKK 120
Query: 163 GNLNTKQKRMQDFN 176
+ K + + + N
Sbjct: 121 DRMWRKNRSLHEKN 134
>pdb|3DGV|A Chain A, Crystal Structure Of Thrombin Activatable Fibrinolysis
Inhibitor (Tafi)
pdb|3DGV|B Chain B, Crystal Structure Of Thrombin Activatable Fibrinolysis
Inhibitor (Tafi)
pdb|3DGV|C Chain C, Crystal Structure Of Thrombin Activatable Fibrinolysis
Inhibitor (Tafi)
pdb|3OSL|A Chain A, Structure Of Bovine Thrombin-Activatable Fibrinolysis
Inhibitor In Complex With Tick Carboxypeptidase
Inhibitor
pdb|3OSL|C Chain C, Structure Of Bovine Thrombin-Activatable Fibrinolysis
Inhibitor In Complex With Tick Carboxypeptidase
Inhibitor
Length = 401
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 80/185 (43%), Gaps = 22/185 (11%)
Query: 358 QRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDNPDGRTLMKPMF 417
++Y++ E+ ++I + YP +V IG S + L+ ++++ +
Sbjct: 99 EQYHSLNEIYSWIEVMTERYPDMVEKIHIGSSYEKYPLYVLKVSKKEQRAKNAMWID--- 155
Query: 418 KYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGF-AAAKE 476
+H E + A ++ + + GK+ T LL D YI+P +N DG+ K+
Sbjct: 156 ---CGIHAREWISPAFCLWFVGSVTYYYGKEKMHTNLLKHMDFYIMPVVNVDGYDYTWKK 212
Query: 477 GKCDSLDGYVGRKNAH-GVDLNRNFPDQF-------EYEAKKVY-------EPETQAIMN 521
+ + + KNA G DLNRNF + ++Y EPE +A+ +
Sbjct: 213 DRMWRKNRSLHEKNACVGTDLNRNFASKHWCGEGASSSSCSEIYCGTYPESEPEVKAVAD 272
Query: 522 FIYSN 526
F+ N
Sbjct: 273 FLRRN 277
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 51/114 (44%), Gaps = 6/114 (5%)
Query: 44 QRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMF 103
++Y++ E+ ++I + YP +V IG S + L+ ++++ +
Sbjct: 99 EQYHSLNEIYSWIEVMTERYPDMVEKIHIGSSYEKYPLYVLKVSKKEQRAKNAMWID--- 155
Query: 104 KYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGF 157
+H E + A ++ + + GK+ T LL D YI+P +N DG+
Sbjct: 156 ---CGIHAREWISPAFCLWFVGSVTYYYGKEKMHTNLLKHMDFYIMPVVNVDGY 206
>pdb|1DTD|A Chain A, Crystal Structure Of The Complex Between The Leech
Carboxypeptidase Inhibitor And The Human
Carboxypeptidase A2 (Lci-Cpa2)
Length = 303
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 8/128 (6%)
Query: 46 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKY 105
Y+ E+ + V +P LV IG S + R + ++ + D KP
Sbjct: 6 YHTLEEISQEMDNLVAEHPGLVSKVNIGSSFENRPMNVLKFSTGGD--------KPAIWL 57
Query: 106 VANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFAAAKEGNL 165
A +H E V A ++ +V GKD IT +L++ DI+++P NPDG+ ++ N
Sbjct: 58 DAGIHAREWVTQATALWTANKIVSDYGKDPSITSILDALDIFLLPVTNPDGYVFSQTKNR 117
Query: 166 NTKQKRMQ 173
++ R +
Sbjct: 118 MWRKTRSK 125
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 64/148 (43%), Gaps = 11/148 (7%)
Query: 360 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDNPDGRTLMKPMFKY 419
Y+ E+ + V +P LV IG S + R + ++ + D KP
Sbjct: 6 YHTLEEISQEMDNLVAEHPGLVSKVNIGSSFENRPMNVLKFSTGGD--------KPAIWL 57
Query: 420 VANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDG--FAAAKEG 477
A +H E V A ++ +V GKD IT +L++ DI+++P NPDG F+ K
Sbjct: 58 DAGIHAREWVTQATALWTANKIVSDYGKDPSITSILDALDIFLLPVTNPDGYVFSQTKNR 117
Query: 478 KCDSLDGYVGRKN-AHGVDLNRNFPDQF 504
V + GVD NRN+ F
Sbjct: 118 MWRKTRSKVSAGSLCVGVDPNRNWDAGF 145
>pdb|2BOA|A Chain A, Human Procarboxypeptidase A4.
pdb|2BOA|B Chain B, Human Procarboxypeptidase A4
Length = 404
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 79/186 (42%), Gaps = 20/186 (10%)
Query: 3 LIVPSLSLLLCHVTL-STAADYYFDFDDLTGLEDAD-------------SAGIDLQRYYN 48
++VPS+SL L S +Y +DL L D + S + Y++
Sbjct: 49 VLVPSVSLQAFKSFLRSQGLEYAVTIEDLQALLDNEDDEMQHNEGQERSSNNFNYGAYHS 108
Query: 49 STELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVAN 108
+ + +P L R IG S + R ++ ++ + G+ + +P A
Sbjct: 109 LEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFS------TGKGVRRPAVWLNAG 162
Query: 109 MHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFAAAKEGNLNTK 168
+H E + A ++ + +V +D IT +L DI+++P NPDG+ + N +
Sbjct: 163 IHSREWISQATAIWTARKIVSDYQRDPAITSILEKMDIFLLPVANPDGYVYTQTQNRLWR 222
Query: 169 QKRMQD 174
+ R ++
Sbjct: 223 KTRSRN 228
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 81/193 (41%), Gaps = 22/193 (11%)
Query: 295 MLGKKNAFSIDQLKNP--FIEIMTLIVPSLSLLLCHVTL-STAADYYFDFDDLTGLEDAD 351
L N ++ K+P F + ++VPS+SL L S +Y +DL L D +
Sbjct: 25 QLVNSNNLKLNFWKSPSSFNRPVDVLVPSVSLQAFKSFLRSQGLEYAVTIEDLQALLDNE 84
Query: 352 -------------SAGIDLQRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAV 398
S + Y++ + + +P L R IG S + R ++ +
Sbjct: 85 DDEMQHNEGQERSSNNFNYGAYHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVL 144
Query: 399 EITHDVDNPDGRTLMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNST 458
+ + G+ + +P A +H E + A ++ + +V +D IT +L
Sbjct: 145 KFS------TGKGVRRPAVWLNAGIHSREWISQATAIWTARKIVSDYQRDPAITSILEKM 198
Query: 459 DIYIVPSINPDGF 471
DI+++P NPDG+
Sbjct: 199 DIFLLPVANPDGY 211
>pdb|4A94|A Chain A, Structure Of The Carboxypeptidase Inhibitor From Nerita
Versicolor In Complex With Human Cpa4
pdb|4A94|B Chain B, Structure Of The Carboxypeptidase Inhibitor From Nerita
Versicolor In Complex With Human Cpa4
Length = 310
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 54/112 (48%), Gaps = 6/112 (5%)
Query: 63 YPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVF 122
+P L R IG S + R ++ ++ + G+ + +P A +H E + A ++
Sbjct: 29 FPDLARRVKIGHSFENRPMYVLKFS------TGKGVRRPAVWLNAGIHSREWISQATAIW 82
Query: 123 LIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFAAAKEGNLNTKQKRMQD 174
+ +V +D IT +L DI+++P NPDG+ + N ++ R ++
Sbjct: 83 TARKIVSDYQRDPAITSILEKMDIFLLPVANPDGYVYTQTQNRLWRKTRSRN 134
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 377 YPHLVRAETIGKSVQGRNLWAVEITHDVDNPDGRTLMKPMFKYVANMHGDETVGYALMVF 436
+P L R IG S + R ++ ++ + G+ + +P A +H E + A ++
Sbjct: 29 FPDLARRVKIGHSFENRPMYVLKFS------TGKGVRRPAVWLNAGIHSREWISQATAIW 82
Query: 437 LIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGF 471
+ +V +D IT +L DI+++P NPDG+
Sbjct: 83 TARKIVSDYQRDPAITSILEKMDIFLLPVANPDGY 117
>pdb|1KWM|A Chain A, Human Procarboxypeptidase B: Three-Dimensional Structure
And Implications For Thrombin-Activatable Fibrinolysis
Inhibitor (Tafi)
pdb|1KWM|B Chain B, Human Procarboxypeptidase B: Three-Dimensional Structure
And Implications For Thrombin-Activatable Fibrinolysis
Inhibitor (Tafi)
Length = 402
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 55/120 (45%), Gaps = 7/120 (5%)
Query: 352 SAGIDLQRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDNPDGRT 411
+ G ++Y ++A+ + P L+ IG + +GR ++ +++ N
Sbjct: 96 ATGHSYEKYNKWETIEAWTQQVATENPALISRSVIGTTFEGRAIYLLKVGKAGQN----- 150
Query: 412 LMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGF 471
KP H E + A + ++ V G++ ++T+LLN D Y++P +N DG+
Sbjct: 151 --KPAIFMDCGFHAREWISPAFCQWFVREAVRTYGREIQVTELLNKLDFYVLPVLNIDGY 208
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/120 (21%), Positives = 55/120 (45%), Gaps = 7/120 (5%)
Query: 38 SAGIDLQRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRT 97
+ G ++Y ++A+ + P L+ IG + +GR ++ +++ +
Sbjct: 96 ATGHSYEKYNKWETIEAWTQQVATENPALISRSVIGTTFEGRAIYLLKVGKAGQN----- 150
Query: 98 LMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGF 157
KP H E + A + ++ V G++ ++T+LLN D Y++P +N DG+
Sbjct: 151 --KPAIFMDCGFHAREWISPAFCQWFVREAVRTYGREIQVTELLNKLDFYVLPVLNIDGY 208
>pdb|2BO9|A Chain A, Human Carboxypeptidase A4 In Complex With Human Latexin.
pdb|2BO9|C Chain C, Human Carboxypeptidase A4 In Complex With Human Latexin
Length = 308
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 54/112 (48%), Gaps = 6/112 (5%)
Query: 63 YPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVF 122
+P L R IG S + R ++ ++ + G+ + +P A +H E + A ++
Sbjct: 27 FPDLARRVKIGHSFENRPMYVLKFS------TGKGVRRPAVWLNAGIHSREWISQATAIW 80
Query: 123 LIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFAAAKEGNLNTKQKRMQD 174
+ +V +D IT +L DI+++P NPDG+ + N ++ R ++
Sbjct: 81 TARKIVSDYQRDPAITSILEKMDIFLLPVANPDGYVYTQTQNRLWRKTRSRN 132
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 377 YPHLVRAETIGKSVQGRNLWAVEITHDVDNPDGRTLMKPMFKYVANMHGDETVGYALMVF 436
+P L R IG S + R ++ ++ + G+ + +P A +H E + A ++
Sbjct: 27 FPDLARRVKIGHSFENRPMYVLKFS------TGKGVRRPAVWLNAGIHSREWISQATAIW 80
Query: 437 LIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGF 471
+ +V +D IT +L DI+++P NPDG+
Sbjct: 81 TARKIVSDYQRDPAITSILEKMDIFLLPVANPDGY 115
>pdb|2PCU|A Chain A, Human Carboxypeptidase A4 In Complex With A Cleaved
Hexapeptide
Length = 305
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 54/112 (48%), Gaps = 6/112 (5%)
Query: 63 YPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVF 122
+P L R IG S + R ++ ++ + G+ + +P A +H E + A ++
Sbjct: 25 FPDLARRVKIGHSFENRPMYVLKFS------TGKGVRRPAVWLNAGIHSREWISQATAIW 78
Query: 123 LIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFAAAKEGNLNTKQKRMQD 174
+ +V +D IT +L DI+++P NPDG+ + N ++ R ++
Sbjct: 79 TARKIVSDYQRDPAITSILEKMDIFLLPVANPDGYVYTQTQNRLWRKTRSRN 130
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 377 YPHLVRAETIGKSVQGRNLWAVEITHDVDNPDGRTLMKPMFKYVANMHGDETVGYALMVF 436
+P L R IG S + R ++ ++ + G+ + +P A +H E + A ++
Sbjct: 25 FPDLARRVKIGHSFENRPMYVLKFS------TGKGVRRPAVWLNAGIHSREWISQATAIW 78
Query: 437 LIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGF 471
+ +V +D IT +L DI+++P NPDG+
Sbjct: 79 TARKIVSDYQRDPAITSILEKMDIFLLPVANPDGY 113
>pdb|1PYT|B Chain B, Ternary Complex Of Procarboxypeptidase A, Proproteinase E,
And Chymotrypsinogen C
pdb|3KGQ|A Chain A, Carboxypeptidase A Liganded To An Organic Small-Molecule:
Conformational Changes
Length = 309
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 9/147 (6%)
Query: 360 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDNPDGRTLMKPMFKY 419
Y+ E+ F+ V +P LV IG+S +GR ++ ++ + N +P
Sbjct: 12 YHTLDEIYDFMDLLVAEHPQLVSKLQIGRSYEGRPIYVLKFSTGGSN-------RPAIWI 64
Query: 420 VANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFA--AAKEG 477
+H E + A V+ + G+D T +L+S DI++ NPDGFA ++
Sbjct: 65 DLGIHSREWITQATGVWFAKKFTEDYGQDPSFTAILDSMDIFLEIVTNPDGFAFTHSQNR 124
Query: 478 KCDSLDGYVGRKNAHGVDLNRNFPDQF 504
GVD NRN+ F
Sbjct: 125 LWRKTRSVTSSSLCVGVDANRNWDAGF 151
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 7/126 (5%)
Query: 46 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKY 105
Y+ E+ F+ V +P LV IG+S +GR ++ ++ S G +P
Sbjct: 12 YHTLDEIYDFMDLLVAEHPQLVSKLQIGRSYEGRPIYVLKF-----STGGSN--RPAIWI 64
Query: 106 VANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFAAAKEGNL 165
+H E + A V+ + G+D T +L+S DI++ NPDGFA N
Sbjct: 65 DLGIHSREWITQATGVWFAKKFTEDYGQDPSFTAILDSMDIFLEIVTNPDGFAFTHSQNR 124
Query: 166 NTKQKR 171
++ R
Sbjct: 125 LWRKTR 130
>pdb|3FX6|A Chain A, X-Ray Crystallographic Studies On The Complex Of
Carboxypeptidase A With The Inhibitor Using Alpha-Nitro
Ketone As The Zinc-Binding Group
pdb|3FX6|C Chain C, X-Ray Crystallographic Studies On The Complex Of
Carboxypeptidase A With The Inhibitor Using Alpha-Nitro
Ketone As The Zinc-Binding Group
pdb|3FX6|E Chain E, X-Ray Crystallographic Studies On The Complex Of
Carboxypeptidase A With The Inhibitor Using Alpha-Nitro
Ketone As The Zinc-Binding Group
pdb|3FVL|A Chain A, Crystallogic Studies On The Complex Of Carboxypeptidase A
With Inhibitors Using Alpha-Hydroxy Ketone As
Zinc-Binding Group
pdb|3FVL|C Chain C, Crystallogic Studies On The Complex Of Carboxypeptidase A
With Inhibitors Using Alpha-Hydroxy Ketone As
Zinc-Binding Group
pdb|3FVL|E Chain E, Crystallogic Studies On The Complex Of Carboxypeptidase A
With Inhibitors Using Alpha-Hydroxy Ketone As
Zinc-Binding Group
Length = 307
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 9/147 (6%)
Query: 360 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDNPDGRTLMKPMFKY 419
Y+ E+ F+ V +P LV IG+S +GR ++ ++ + N +P
Sbjct: 12 YHTLDEIYDFMDLLVAEHPQLVSKLQIGRSYEGRPIYVLKFSTGGSN-------RPAIWI 64
Query: 420 VANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFA--AAKEG 477
+H E + A V+ + G+D T +L+S DI++ NPDGFA ++
Sbjct: 65 DLGIHSREWITQATGVWFAKKFTEDYGQDPSFTAILDSMDIFLEIVTNPDGFAFTHSQNR 124
Query: 478 KCDSLDGYVGRKNAHGVDLNRNFPDQF 504
GVD NRN+ F
Sbjct: 125 LWRKTRSVTSSSLCVGVDANRNWDAGF 151
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 7/126 (5%)
Query: 46 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKY 105
Y+ E+ F+ V +P LV IG+S +GR ++ ++ S G +P
Sbjct: 12 YHTLDEIYDFMDLLVAEHPQLVSKLQIGRSYEGRPIYVLKF-----STGGSN--RPAIWI 64
Query: 106 VANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFAAAKEGNL 165
+H E + A V+ + G+D T +L+S DI++ NPDGFA N
Sbjct: 65 DLGIHSREWITQATGVWFAKKFTEDYGQDPSFTAILDSMDIFLEIVTNPDGFAFTHSQNR 124
Query: 166 NTKQKR 171
++ R
Sbjct: 125 LWRKTR 130
>pdb|1HDQ|A Chain A, Crystal Structure Of Bovine Pancreatic Carboxypeptidase A
Complexed With D-N-Hydroxyaminocarbonyl Phenylalanine At
2.3 A
pdb|2CTB|A Chain A, The High Resolution Crystal Structure Of The Complex
Between Carboxypeptidase A And L-Phenyl Lactate
pdb|2CTC|A Chain A, The High Resolution Crystal Structure Of The Complex
Between Carboxypeptidase A And L-Phenyl Lactate
Length = 307
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 9/147 (6%)
Query: 360 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDNPDGRTLMKPMFKY 419
Y+ E+ F+ V +P LV IG+S +GR ++ ++ + N +P
Sbjct: 12 YHTLDEIYDFMDLLVAEHPQLVSKLQIGRSYEGRPIYVLKFSTGGSN-------RPAIWI 64
Query: 420 VANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFA--AAKEG 477
+H E + A V+ + G+D T +L+S DI++ NPDGFA ++
Sbjct: 65 DLGIHSREWITQATGVWFAKKFTEDYGQDPSFTAILDSMDIFLEIVTNPDGFAFTHSQNR 124
Query: 478 KCDSLDGYVGRKNAHGVDLNRNFPDQF 504
GVD NRN+ F
Sbjct: 125 LWRKTRSVTSSSLCVGVDANRNWDAGF 151
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 7/126 (5%)
Query: 46 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKY 105
Y+ E+ F+ V +P LV IG+S +GR ++ ++ S G +P
Sbjct: 12 YHTLDEIYDFMDLLVAEHPQLVSKLQIGRSYEGRPIYVLKF-----STGGSN--RPAIWI 64
Query: 106 VANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFAAAKEGNL 165
+H E + A V+ + G+D T +L+S DI++ NPDGFA N
Sbjct: 65 DLGIHSREWITQATGVWFAKKFTEDYGQDPSFTAILDSMDIFLEIVTNPDGFAFTHSQNR 124
Query: 166 NTKQKR 171
++ R
Sbjct: 125 LWRKTR 130
>pdb|4A37|A Chain A, Metallo-Carboxypeptidase From Pseudomonas Aeruginosa
pdb|4A37|B Chain B, Metallo-Carboxypeptidase From Pseudomonas Aeruginosa
pdb|4A38|A Chain A, Metallo-Carboxypeptidase From Pseudomonas Aureginosa In
Complex With L-Benzylsuccinic Acid
pdb|4A38|B Chain B, Metallo-Carboxypeptidase From Pseudomonas Aureginosa In
Complex With L-Benzylsuccinic Acid
pdb|4A39|A Chain A, Metallo-Carboxypeptidase From Pseudomonas Aeruginosa In
Complex With (2-Guanidinoethylmercapto)succinic Acid
pdb|4A39|B Chain B, Metallo-Carboxypeptidase From Pseudomonas Aeruginosa In
Complex With (2-Guanidinoethylmercapto)succinic Acid
Length = 388
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 55/116 (47%), Gaps = 20/116 (17%)
Query: 385 TIGKSVQGRNLWAVEITHDVDNPDGRTLMKPMFKYVANMHGDETVGYALMVFLIQYLVLK 444
+G SVQGR+ +E+ +PD + +A H E + M LI+ L
Sbjct: 148 AVGTSVQGRD---IELLRVRRHPDSHLKLW----VIAQQHPGEHMAEWFMEGLIERLQRP 200
Query: 445 DGKDDRITQLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAHGVDLNRNF 500
D D + +LL D+Y+VP++NPDG + G + R NA G DLNR +
Sbjct: 201 D--DTEMQRLLEKADLYLVPNMNPDG----------AFHGNL-RTNAAGQDLNRAW 243
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 49/106 (46%), Gaps = 13/106 (12%)
Query: 71 TIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFLIQYLVLK 130
+G SVQGR++ + + DS +A H E + M LI+ L
Sbjct: 148 AVGTSVQGRDIELLRVRRHPDS-------HLKLWVIAQQHPGEHMAEWFMEGLIERLQRP 200
Query: 131 DGKDDRITQLLNSTDIYIVPSINPDGFAAAKEGNLNTKQKRMQDFN 176
D D + +LL D+Y+VP++NPDG A GNL T QD N
Sbjct: 201 D--DTEMQRLLEKADLYLVPNMNPDG---AFHGNLRTNAA-GQDLN 240
>pdb|1CPX|A Chain A, Beta Form Of Carboxypeptidase A (Residues 3-307) From
Bovine Pancreas In An Orthorhombic Crystal Form With Two
Zinc Ions In The Active Site.
pdb|1F57|A Chain A, Carboxypeptidase A Complex With D-Cysteine At 1.75 A
pdb|1M4L|A Chain A, Structure Of Native Carboxypeptidase A At 1.25 Resolution
pdb|1ARL|A Chain A, Carboxypeptidase A With Zn Removed
pdb|2RFH|A Chain A, Crystal Structure Analysis Of
Cpa-2-Benzyl-3-Nitropropanoic Acid Complex
Length = 307
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 9/147 (6%)
Query: 360 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDNPDGRTLMKPMFKY 419
Y+ E+ F+ V +P LV IG+S +GR ++ ++ + N +P
Sbjct: 12 YHTLDEIYDFMDLLVAEHPQLVSKLQIGRSYEGRPIYVLKFSTGGSN-------RPAIWI 64
Query: 420 VANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFA--AAKEG 477
+H E + A V+ + G+D T +L+S DI++ NPDGFA ++
Sbjct: 65 DLGIHSREWITQATGVWFAKKFTEDYGQDPSFTAILDSMDIFLEIVTNPDGFAFTHSQNR 124
Query: 478 KCDSLDGYVGRKNAHGVDLNRNFPDQF 504
GVD NRN+ F
Sbjct: 125 LWRKTRSVTSSSLCVGVDANRNWDAGF 151
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 7/126 (5%)
Query: 46 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKY 105
Y+ E+ F+ V +P LV IG+S +GR ++ ++ S G +P
Sbjct: 12 YHTLDEIYDFMDLLVAEHPQLVSKLQIGRSYEGRPIYVLKF-----STGGSN--RPAIWI 64
Query: 106 VANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFAAAKEGNL 165
+H E + A V+ + G+D T +L+S DI++ NPDGFA N
Sbjct: 65 DLGIHSREWITQATGVWFAKKFTEDYGQDPSFTAILDSMDIFLEIVTNPDGFAFTHSQNR 124
Query: 166 NTKQKR 171
++ R
Sbjct: 125 LWRKTR 130
>pdb|1EE3|P Chain P, Cadmium-Substituted Bovine Pancreatic Carboxypeptidase A
(Alfa-Form) At Ph 7.5 And 2 Mm Chloride In Monoclinic
Crystal Form
pdb|1ELL|P Chain P, Cadmium-Substituted Bovine Pancreatic Carboxypeptidase A
(Alfa-Form) At Ph 7.5 And 0.25 M Chloride In Monoclinic
Crystal Form.
pdb|1ELM|P Chain P, Cadmium-Substituted Bovine Pacreatic Carboxypeptidase A
(Alfa-Form) At Ph 5.5 And 2 Mm Chloride In Monoclinic
Crystal Form.
pdb|1ZLH|A Chain A, Crystal Structure Of The Tick Carboxypeptidase Inhibitor
In Complex With Bovine Carboxypeptidase A
pdb|2ABZ|A Chain A, Crystal Structure Of C19aC43A MUTANT OF LEECH
Carboxypeptidase Inhibitor In Complex With Bovine
Carboxypeptidase A
pdb|2ABZ|B Chain B, Crystal Structure Of C19aC43A MUTANT OF LEECH
Carboxypeptidase Inhibitor In Complex With Bovine
Carboxypeptidase A
pdb|1ARM|A Chain A, Carboxypeptidase A With Zn Replaced By Hg
pdb|1YME|A Chain A, Structure Of Carboxypeptidase
pdb|3I1U|A Chain A, Carboxypeptidase A Inhibited By A Thiirane Mechanism-Based
Inactivator
pdb|3HLP|A Chain A, Carboxypeptidase A Liganded To An Organic Small-Molecule:
Conformational Changes
pdb|3HLP|B Chain B, Carboxypeptidase A Liganded To An Organic Small-Molecule:
Conformational Changes
pdb|3HUV|A Chain A, Carboxypeptidase A Liganded To An Organic Small-Molecule:
Conformational Changes
Length = 309
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 9/147 (6%)
Query: 360 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDNPDGRTLMKPMFKY 419
Y+ E+ F+ V +P LV IG+S +GR ++ ++ + N +P
Sbjct: 12 YHTLDEIYDFMDLLVAEHPQLVSKLQIGRSYEGRPIYVLKFSTGGSN-------RPAIWI 64
Query: 420 VANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFA--AAKEG 477
+H E + A V+ + G+D T +L+S DI++ NPDGFA ++
Sbjct: 65 DLGIHSREWITQATGVWFAKKFTEDYGQDPSFTAILDSMDIFLEIVTNPDGFAFTHSQNR 124
Query: 478 KCDSLDGYVGRKNAHGVDLNRNFPDQF 504
GVD NRN+ F
Sbjct: 125 LWRKTRSVTSSSLCVGVDANRNWDAGF 151
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 7/126 (5%)
Query: 46 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKY 105
Y+ E+ F+ V +P LV IG+S +GR ++ ++ S G +P
Sbjct: 12 YHTLDEIYDFMDLLVAEHPQLVSKLQIGRSYEGRPIYVLKF-----STGGSN--RPAIWI 64
Query: 106 VANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFAAAKEGNL 165
+H E + A V+ + G+D T +L+S DI++ NPDGFA N
Sbjct: 65 DLGIHSREWITQATGVWFAKKFTEDYGQDPSFTAILDSMDIFLEIVTNPDGFAFTHSQNR 124
Query: 166 NTKQKR 171
++ R
Sbjct: 125 LWRKTR 130
>pdb|1PCA|A Chain A, Three Dimensional Structure Of Porcine Pancreatic
Procarboxypeptidase A. A Comparison Of The A And B
Zymogens And Their Determinants For Inhibition And
Activation
Length = 403
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 31/204 (15%)
Query: 283 DVPDTESVRLDFMLG-KKNAFSIDQLKNPFIEIMTLIVPSLSLLLCHVTLSTAADYYFDF 341
++ D E ++LDF G + F ID ++ PF I + V L H Y
Sbjct: 26 ELEDLEHLQLDFWRGPARPGFPID-VRVPFPSIQAVKV----FLEAH-----GIRYTIMI 75
Query: 342 DDLTGLEDAD-------------SAGIDLQRYYNSTELDAFILKTVKSYPHLVRAETIGK 388
+D+ L D + ++ + Y+ E+ F+ V +P LV IG+
Sbjct: 76 EDVQLLLDEEQEQMFASQGRARTTSTFNYATYHTLEEIYDFMDILVAEHPALVSKLQIGR 135
Query: 389 SVQGRNLWAVEITHDVDNPDGRTLMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKD 448
S +GR ++ ++ + N +P + +H E + A V+ + + G++
Sbjct: 136 SYEGRPIYVLKFSTGGSN-------RPAIWIDSGIHSREWITQASGVWFAKKITENYGQN 188
Query: 449 DRITQLLNSTDIYIVPSINPDGFA 472
T +L+S DI++ NP+GFA
Sbjct: 189 SSFTAILDSMDIFLEIVTNPNGFA 212
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 7/126 (5%)
Query: 46 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKY 105
Y+ E+ F+ V +P LV IG+S +GR ++ ++ S G +P
Sbjct: 107 YHTLEEIYDFMDILVAEHPALVSKLQIGRSYEGRPIYVLKF-----STGGSN--RPAIWI 159
Query: 106 VANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFAAAKEGNL 165
+ +H E + A V+ + + G++ T +L+S DI++ NP+GFA N
Sbjct: 160 DSGIHSREWITQASGVWFAKKITENYGQNSSFTAILDSMDIFLEIVTNPNGFAFTHSDNR 219
Query: 166 NTKQKR 171
++ R
Sbjct: 220 LWRKTR 225
>pdb|1NSA|A Chain A, Three-Dimensional Structure Of Porcine Procarboxypeptidase
B: A Structural Basis Of Its Inactivity
Length = 395
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 74/190 (38%), Gaps = 22/190 (11%)
Query: 352 SAGIDLQRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDNPDGRT 411
+ G ++Y N ++A+ + P L+ IG + G N++ +++ N
Sbjct: 90 TTGHSYEKYNNWETIEAWTEQVTSKNPDLISRSAIGTTFDGDNIYLLKVGKPGSN----- 144
Query: 412 LMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDG- 470
KP H E + A + ++ V G + +T+ L++ D Y++P +N DG
Sbjct: 145 --KPAIFMDCGFHAREWISQAFCQWFVRDAVRTYGYEAHMTEFLDNLDFYVLPVLNIDGY 202
Query: 471 -FAAAKEGKCDSLDGYVGRKNAHGVDLNRNF------------PDQFEYEAKKV-YEPET 516
+ K + G D NRNF P Y E ET
Sbjct: 203 IYTWTKNRMWRKTRSTNAGSSCTGTDPNRNFNAGWCTVGASVNPCNETYCGSAAESEKET 262
Query: 517 QAIMNFIYSN 526
+A+ +FI +N
Sbjct: 263 KALADFIRNN 272
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 53/120 (44%), Gaps = 7/120 (5%)
Query: 38 SAGIDLQRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRT 97
+ G ++Y N ++A+ + P L+ IG + G N++ ++ V P
Sbjct: 90 TTGHSYEKYNNWETIEAWTEQVTSKNPDLISRSAIGTTFDGDNIYLLK----VGKPGSN- 144
Query: 98 LMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGF 157
KP H E + A + ++ V G + +T+ L++ D Y++P +N DG+
Sbjct: 145 --KPAIFMDCGFHAREWISQAFCQWFVRDAVRTYGYEAHMTEFLDNLDFYVLPVLNIDGY 202
>pdb|3FJU|A Chain A, Ascaris Suum Carboxypeptidase Inhibitor In Complex With
Human Carboxypeptidase A1
Length = 307
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 7/126 (5%)
Query: 46 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKY 105
Y+ E+ F+ V PHLV IG + +GR ++ ++ S G +P
Sbjct: 11 YHTLEEIYDFLDLLVAENPHLVSKIQIGNTYEGRPIYVLKF-----STGGS--KRPAIWI 63
Query: 106 VANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFAAAKEGNL 165
+H E V A V+ + + G+D T +L++ DI++ NPDGFA N
Sbjct: 64 DTGIHSREWVTQASGVWFAKKITQDYGQDAAFTAILDTLDIFLEIVTNPDGFAFTHSTNR 123
Query: 166 NTKQKR 171
++ R
Sbjct: 124 MWRKTR 129
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 64/152 (42%), Gaps = 19/152 (12%)
Query: 360 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDNPDGRTLMKPMFKY 419
Y+ E+ F+ V PHLV IG + +GR ++ ++ + +P
Sbjct: 11 YHTLEEIYDFLDLLVAENPHLVSKIQIGNTYEGRPIYVLKFSTGGSK-------RPAIWI 63
Query: 420 VANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFAAAKEGKC 479
+H E V A V+ + + G+D T +L++ DI++ NPDGFA
Sbjct: 64 DTGIHSREWVTQASGVWFAKKITQDYGQDAAFTAILDTLDIFLEIVTNPDGFAFTH---- 119
Query: 480 DSLDGYVGRKNAH-------GVDLNRNFPDQF 504
S + + +H GVD NRN+ F
Sbjct: 120 -STNRMWRKTRSHTAGSLCIGVDPNRNWDAGF 150
>pdb|2V77|A Chain A, Crystal Structure Of Human Carboxypeptidase A1
pdb|2V77|B Chain B, Crystal Structure Of Human Carboxypeptidase A1
Length = 309
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 7/126 (5%)
Query: 46 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKY 105
Y+ E+ F+ V PHLV IG + +GR ++ ++ S G +P
Sbjct: 12 YHTLEEIYDFLDLLVAENPHLVSKIQIGNTYEGRPIYVLKF-----STGGS--KRPAIWI 64
Query: 106 VANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFAAAKEGNL 165
+H E V A V+ + + G+D T +L++ DI++ NPDGFA N
Sbjct: 65 DTGIHSREWVTQASGVWFAKKITQDYGQDAAFTAILDTLDIFLEIVTNPDGFAFTHSTNR 124
Query: 166 NTKQKR 171
++ R
Sbjct: 125 MWRKTR 130
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 64/152 (42%), Gaps = 19/152 (12%)
Query: 360 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDNPDGRTLMKPMFKY 419
Y+ E+ F+ V PHLV IG + +GR ++ ++ + +P
Sbjct: 12 YHTLEEIYDFLDLLVAENPHLVSKIQIGNTYEGRPIYVLKFSTGGSK-------RPAIWI 64
Query: 420 VANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFAAAKEGKC 479
+H E V A V+ + + G+D T +L++ DI++ NPDGFA
Sbjct: 65 DTGIHSREWVTQASGVWFAKKITQDYGQDAAFTAILDTLDIFLEIVTNPDGFAFTH---- 120
Query: 480 DSLDGYVGRKNAH-------GVDLNRNFPDQF 504
S + + +H GVD NRN+ F
Sbjct: 121 -STNRMWRKTRSHTAGSLCIGVDPNRNWDAGF 151
>pdb|1CBX|A Chain A, Crystal Structure Of The Complex Between Carboxypeptidase
A And The Biproduct Analog Inhibitor L-Benzylsuccinate
At 2.0 Angstroms Resolution
pdb|1CPS|A Chain A, Structural Comparison Of Sulfodiimine And Sulfonamide
Inhibitors In Their Complexes With Zinc Enzymes
Length = 307
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 64/153 (41%), Gaps = 21/153 (13%)
Query: 360 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDNPDGRTLMKPMFKY 419
Y+ E+ F+ V +P LV IG+S +GR ++ ++ + N +P
Sbjct: 12 YHTLDEIYDFMDLLVAEHPQLVSKLQIGRSYEGRPIYVLKFSTGGSN-------RPAIWI 64
Query: 420 VANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFAAAKEGKC 479
+H E + A V+ + G++ T +L+S DI++ NP+GFA
Sbjct: 65 DLGIHSREWITQATGVWFAKKFTENYGQNPSFTAILDSMDIFLEIVTNPNGFAFTHS--- 121
Query: 480 DSLDGYVGRKNAH--------GVDLNRNFPDQF 504
+ + RK GVD NRN+ F
Sbjct: 122 ---ENRLWRKTRSVTSSSLCVGVDANRNWDAGF 151
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 7/126 (5%)
Query: 46 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKY 105
Y+ E+ F+ V +P LV IG+S +GR ++ ++ S G +P
Sbjct: 12 YHTLDEIYDFMDLLVAEHPQLVSKLQIGRSYEGRPIYVLKF-----STGGSN--RPAIWI 64
Query: 106 VANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFAAAKEGNL 165
+H E + A V+ + G++ T +L+S DI++ NP+GFA N
Sbjct: 65 DLGIHSREWITQATGVWFAKKFTENYGQNPSFTAILDSMDIFLEIVTNPNGFAFTHSENR 124
Query: 166 NTKQKR 171
++ R
Sbjct: 125 LWRKTR 130
>pdb|1HDU|A Chain A, Crystal Structure Of Bovine Pancreatic Carboxypeptidase A
Complexed With Aminocarbonylphenylalanine At 1.75 A
pdb|1HDU|B Chain B, Crystal Structure Of Bovine Pancreatic Carboxypeptidase A
Complexed With Aminocarbonylphenylalanine At 1.75 A
pdb|1HDU|D Chain D, Crystal Structure Of Bovine Pancreatic Carboxypeptidase A
Complexed With Aminocarbonylphenylalanine At 1.75 A
pdb|1HDU|E Chain E, Crystal Structure Of Bovine Pancreatic Carboxypeptidase A
Complexed With Aminocarbonylphenylalanine At 1.75 A
pdb|1HEE|A Chain A, Crystal Structure Of Bovine Pancreatic Carboxypeptidase A
Complexed With L-N-Hydroxyaminocarbonyl Phenylalanine At
2.3 A
pdb|1HEE|B Chain B, Crystal Structure Of Bovine Pancreatic Carboxypeptidase A
Complexed With L-N-Hydroxyaminocarbonyl Phenylalanine At
2.3 A
pdb|1HEE|D Chain D, Crystal Structure Of Bovine Pancreatic Carboxypeptidase A
Complexed With L-N-Hydroxyaminocarbonyl Phenylalanine At
2.3 A
pdb|1HEE|E Chain E, Crystal Structure Of Bovine Pancreatic Carboxypeptidase A
Complexed With L-N-Hydroxyaminocarbonyl Phenylalanine At
2.3 A
pdb|1IY7|A Chain A, Crystal Structure Of Cpa And Sulfamide-based Inhibitor
Complex
pdb|5CPA|A Chain A, Refined Crystal Structure Of Carboxypeptidase A At 1.54
Angstroms Resolution.
pdb|6CPA|A Chain A, Crystal Structure Of The Complex Of Carboxypeptidase A
With A Strongly Bound Phosphonate In A New Crystalline
Form: Comparison With Structures Of Other Complexes
pdb|7CPA|A Chain A, Comparison Of The Structures Of Three Carboxypeptidase A-
Phosphonate Complexes Determined By X-Ray
Crystallography
pdb|8CPA|A Chain A, Comparison Of The Structures Of Three Carboxypeptidase A-
Phosphonate Complexes Determined By X-Ray
Crystallography
pdb|3CPA|A Chain A, X-Ray Crystallographic Investigation Of Substrate Binding
To Carboxypeptidase A At Subzero Temperature
pdb|4CPA|A Chain A, Refined Crystal Structure Of The Potato Inhibitor Complex
Of Carboxypeptidase A At 2.5 Angstroms Resolution
pdb|4CPA|B Chain B, Refined Crystal Structure Of The Potato Inhibitor Complex
Of Carboxypeptidase A At 2.5 Angstroms Resolution
Length = 307
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 64/153 (41%), Gaps = 21/153 (13%)
Query: 360 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDNPDGRTLMKPMFKY 419
Y+ E+ F+ V +P LV IG+S +GR ++ ++ + N +P
Sbjct: 12 YHTLDEIYDFMDLLVAQHPELVSKLQIGRSYEGRPIYVLKFSTGGSN-------RPAIWI 64
Query: 420 VANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFAAAKEGKC 479
+H E + A V+ + G++ T +L+S DI++ NP+GFA
Sbjct: 65 DLGIHSREWITQATGVWFAKKFTENYGQNPSFTAILDSMDIFLEIVTNPNGFAFTHS--- 121
Query: 480 DSLDGYVGRKNAH--------GVDLNRNFPDQF 504
+ + RK GVD NRN+ F
Sbjct: 122 ---ENRLWRKTRSVTSSSLCVGVDANRNWDAGF 151
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 7/126 (5%)
Query: 46 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKY 105
Y+ E+ F+ V +P LV IG+S +GR ++ ++ S G +P
Sbjct: 12 YHTLDEIYDFMDLLVAQHPELVSKLQIGRSYEGRPIYVLKF-----STGGSN--RPAIWI 64
Query: 106 VANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFAAAKEGNL 165
+H E + A V+ + G++ T +L+S DI++ NP+GFA N
Sbjct: 65 DLGIHSREWITQATGVWFAKKFTENYGQNPSFTAILDSMDIFLEIVTNPNGFAFTHSENR 124
Query: 166 NTKQKR 171
++ R
Sbjct: 125 LWRKTR 130
>pdb|1BAV|A Chain A, Carboxypeptidase A Complexed With
2-Benzyl-3-Iodo-Propanoic Acid (Bip)
pdb|1BAV|B Chain B, Carboxypeptidase A Complexed With
2-Benzyl-3-Iodo-Propanoic Acid (Bip)
pdb|1BAV|C Chain C, Carboxypeptidase A Complexed With
2-Benzyl-3-Iodo-Propanoic Acid (Bip)
pdb|1BAV|D Chain D, Carboxypeptidase A Complexed With
2-Benzyl-3-Iodo-Propanoic Acid (Bip)
Length = 309
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 64/153 (41%), Gaps = 21/153 (13%)
Query: 360 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDNPDGRTLMKPMFKY 419
Y+ E+ F+ V +P LV IG+S +GR ++ ++ + N +P
Sbjct: 12 YHTLDEIYDFMDLLVAQHPELVSKLQIGRSYEGRPIYVLKFSTGGSN-------RPAIWI 64
Query: 420 VANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFAAAKEGKC 479
+H E + A V+ + G++ T +L+S DI++ NP+GFA
Sbjct: 65 DLGIHSREWITQATGVWFAKKFTENYGQNPSFTAILDSMDIFLEIVTNPNGFAFTHS--- 121
Query: 480 DSLDGYVGRKNAH--------GVDLNRNFPDQF 504
+ + RK GVD NRN+ F
Sbjct: 122 ---ENRLWRKTRSVTSSSLCVGVDANRNWDAGF 151
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 7/126 (5%)
Query: 46 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKY 105
Y+ E+ F+ V +P LV IG+S +GR ++ ++ S G +P
Sbjct: 12 YHTLDEIYDFMDLLVAQHPELVSKLQIGRSYEGRPIYVLKF-----STGGSN--RPAIWI 64
Query: 106 VANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFAAAKEGNL 165
+H E + A V+ + G++ T +L+S DI++ NP+GFA N
Sbjct: 65 DLGIHSREWITQATGVWFAKKFTENYGQNPSFTAILDSMDIFLEIVTNPNGFAFTHSENR 124
Query: 166 NTKQKR 171
++ R
Sbjct: 125 LWRKTR 130
>pdb|3LMS|A Chain A, Structure Of Human Activated Thrombin-Activatable
Fibrinolys Inhibitor, Tafia, In Complex With
Tick-Derived Funnelin Inh Tci
Length = 309
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 76/185 (41%), Gaps = 22/185 (11%)
Query: 358 QRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDNPDGRTLMKPMF 417
++Y++ E+ ++I + +P ++ IG S + L+ ++++ +
Sbjct: 7 EQYHSLNEIYSWIEFITERHPDMLTKIHIGSSFEKYPLYVLKVSGKEQAAKNAIWID--- 63
Query: 418 KYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDG--FAAAK 475
+H E + A ++ I ++ G + T LL D Y++P +N DG ++ K
Sbjct: 64 ---CGIHAREWISPAFCLWFIGHITQFYGIIGQYTNLLRLVDFYVMPVVNVDGYDYSWKK 120
Query: 476 EGKCDSLDGYVGRKNAHGVDLNRNFPDQFEYE-------AKKVY-------EPETQAIMN 521
+ + G DLNRNF + E + Y EPE +A+ +
Sbjct: 121 NRMWRKNRSFYANNHCIGTDLNRNFASKHWCEEGASSSSCSETYCGLYPESEPEVKAVAS 180
Query: 522 FIYSN 526
F+ N
Sbjct: 181 FLRRN 185
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/128 (18%), Positives = 58/128 (45%), Gaps = 6/128 (4%)
Query: 44 QRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMF 103
++Y++ E+ ++I + +P ++ IG S + L+ ++++ + +
Sbjct: 7 EQYHSLNEIYSWIEFITERHPDMLTKIHIGSSFEKYPLYVLKVSGKEQAAKNAIWID--- 63
Query: 104 KYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFAAAKEG 163
+H E + A ++ I ++ G + T LL D Y++P +N DG+ + +
Sbjct: 64 ---CGIHAREWISPAFCLWFIGHITQFYGIIGQYTNLLRLVDFYVMPVVNVDGYDYSWKK 120
Query: 164 NLNTKQKR 171
N ++ R
Sbjct: 121 NRMWRKNR 128
>pdb|3D66|A Chain A, Crystal Structure Of Thrombin-Activatable Fibrinolysis
Inhibitor (Tafi)
pdb|3D66|B Chain B, Crystal Structure Of Thrombin-Activatable Fibrinolysis
Inhibitor (Tafi)
pdb|3D66|C Chain C, Crystal Structure Of Thrombin-Activatable Fibrinolysis
Inhibitor (Tafi)
pdb|3D67|A Chain A, Crystal Structure Of Thrombin-Activatable Fibrinolysis
Inhibitor (Tafi) In Complex With
2-Guanidino-Ethyl-Mercaptosuccinic Acid (Gemsa)
pdb|3D67|B Chain B, Crystal Structure Of Thrombin-Activatable Fibrinolysis
Inhibitor (Tafi) In Complex With
2-Guanidino-Ethyl-Mercaptosuccinic Acid (Gemsa)
pdb|3D67|C Chain C, Crystal Structure Of Thrombin-Activatable Fibrinolysis
Inhibitor (Tafi) In Complex With
2-Guanidino-Ethyl-Mercaptosuccinic Acid (Gemsa)
Length = 424
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 76/185 (41%), Gaps = 22/185 (11%)
Query: 358 QRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDNPDGRTLMKPMF 417
++Y++ E+ ++I + +P ++ IG S + L+ ++++ +
Sbjct: 122 EQYHSLNEIYSWIEFITERHPDMLTKIHIGSSFEKYPLYVLKVSGKEQTAKNAIWID--- 178
Query: 418 KYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDG--FAAAK 475
+H E + A ++ I ++ G + T LL D Y++P +N DG ++ K
Sbjct: 179 ---CGIHAREWISPAFCLWFIGHITQFYGIIGQYTNLLRLVDFYVMPVVNVDGYDYSWKK 235
Query: 476 EGKCDSLDGYVGRKNAHGVDLNRNFPDQFEYE-------AKKVY-------EPETQAIMN 521
+ + G DLNRNF + E + Y EPE +A+ +
Sbjct: 236 NRMWRKNRSFYANNHCIGTDLNRNFASKHWCEEGASSSSCSETYCGLYPESEPEVKAVAS 295
Query: 522 FIYSN 526
F+ N
Sbjct: 296 FLRRN 300
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 24/128 (18%), Positives = 58/128 (45%), Gaps = 6/128 (4%)
Query: 44 QRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMF 103
++Y++ E+ ++I + +P ++ IG S + L+ ++++ + +
Sbjct: 122 EQYHSLNEIYSWIEFITERHPDMLTKIHIGSSFEKYPLYVLKVSGKEQTAKNAIWID--- 178
Query: 104 KYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFAAAKEG 163
+H E + A ++ I ++ G + T LL D Y++P +N DG+ + +
Sbjct: 179 ---CGIHAREWISPAFCLWFIGHITQFYGIIGQYTNLLRLVDFYVMPVVNVDGYDYSWKK 235
Query: 164 NLNTKQKR 171
N ++ R
Sbjct: 236 NRMWRKNR 243
>pdb|3D68|A Chain A, Crystal Structure Of A T325i/t329i/h333y/h335q Mutant Of
Thrombin- Activatable Fibrinolysis Inhibitor (tafi-iiyq)
pdb|3D68|B Chain B, Crystal Structure Of A T325i/t329i/h333y/h335q Mutant Of
Thrombin- Activatable Fibrinolysis Inhibitor (tafi-iiyq)
pdb|3D68|C Chain C, Crystal Structure Of A T325i/t329i/h333y/h335q Mutant Of
Thrombin- Activatable Fibrinolysis Inhibitor (tafi-iiyq)
Length = 424
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 76/185 (41%), Gaps = 22/185 (11%)
Query: 358 QRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDNPDGRTLMKPMF 417
++Y++ E+ ++I + +P ++ IG S + L+ ++++ +
Sbjct: 122 EQYHSLNEIYSWIEFITERHPDMLTKIHIGSSFEKYPLYVLKVSGKEQTAKNAIWID--- 178
Query: 418 KYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDG--FAAAK 475
+H E + A ++ I ++ G + T LL D Y++P +N DG ++ K
Sbjct: 179 ---CGIHAREWISPAFCLWFIGHITQFYGIIGQYTNLLRLVDFYVMPVVNVDGYDYSWKK 235
Query: 476 EGKCDSLDGYVGRKNAHGVDLNRNFPDQFEYE-------AKKVY-------EPETQAIMN 521
+ + G DLNRNF + E + Y EPE +A+ +
Sbjct: 236 NRMWRKNRSFYANNHCIGTDLNRNFASKHWCEEGASSSSCSETYCGLYPESEPEVKAVAS 295
Query: 522 FIYSN 526
F+ N
Sbjct: 296 FLRRN 300
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/128 (18%), Positives = 58/128 (45%), Gaps = 6/128 (4%)
Query: 44 QRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMF 103
++Y++ E+ ++I + +P ++ IG S + L+ ++++ + +
Sbjct: 122 EQYHSLNEIYSWIEFITERHPDMLTKIHIGSSFEKYPLYVLKVSGKEQTAKNAIWID--- 178
Query: 104 KYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFAAAKEG 163
+H E + A ++ I ++ G + T LL D Y++P +N DG+ + +
Sbjct: 179 ---CGIHAREWISPAFCLWFIGHITQFYGIIGQYTNLLRLVDFYVMPVVNVDGYDYSWKK 235
Query: 164 NLNTKQKR 171
N ++ R
Sbjct: 236 NRMWRKNR 243
>pdb|3L2N|A Chain A, Crystal Structure Of Putative Carboxypeptidase A
(yp_562911.1) From Shewanella Denitrificans Os-217 At
2.39 A Resolution
pdb|3L2N|B Chain B, Crystal Structure Of Putative Carboxypeptidase A
(yp_562911.1) From Shewanella Denitrificans Os-217 At
2.39 A Resolution
Length = 395
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 21/131 (16%)
Query: 370 ILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDNPDGRTLMKPMFKYVANMHGDETV 429
++ V+ +P LV E +G ++ GR+ V++ D +P +++ A H ET
Sbjct: 139 LISAVQLHP-LVSTEHLGLTLDGRDXTLVKVGDD--DPSKKSIW-----ITARQHPGETX 190
Query: 430 GYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRK 489
L+ L+ L+ D + LL+ + YIVP+ NPDG S+ G++ R
Sbjct: 191 AEWLVEGLLNQLLDNDCPTSKA--LLDKANFYIVPNXNPDG----------SVRGHL-RT 237
Query: 490 NAHGVDLNRNF 500
NA G +LNR +
Sbjct: 238 NAVGANLNREW 248
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 10/101 (9%)
Query: 56 ILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETV 115
++ V+ +P LV E +G ++ GR+ V++ D S K A H ET
Sbjct: 139 LISAVQLHP-LVSTEHLGLTLDGRDXTLVKVGDDDPS-------KKSIWITARQHPGETX 190
Query: 116 GYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDG 156
L+ L+ L+ D + LL+ + YIVP+ NPDG
Sbjct: 191 AEWLVEGLLNQLLDNDCPTSKA--LLDKANFYIVPNXNPDG 229
>pdb|3K2K|A Chain A, Crystal Structure Of Putative Carboxypeptidase
(Yp_103406.1) From Burkholderia Mallei Atcc 23344 At
2.49 A Resolution
Length = 403
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 77/176 (43%), Gaps = 23/176 (13%)
Query: 363 STELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDNPDGRTLMKPMFKYVAN 422
S E + L V+ P E +G++V+GR V + PD K +A
Sbjct: 134 SEERHSEFLGAVQQXPQASVVE-LGRTVEGRPXSLVVLG----TPDEAGAAKKKVWIIAR 188
Query: 423 MHGDETVGYALMVFLIQYLV-LKDGKDDRITQ-LLNSTDIYIVPSINPDGFAAAKEGKCD 480
H E+ + L++ LV D D + + L + YIVP+ NPDG
Sbjct: 189 QHPGESXAEWFIEGLVKRLVGWGDWSGDPVARKLYDHATFYIVPNXNPDG---------- 238
Query: 481 SLDGYVGRKNAHGVDLNRNFPDQFEYEAKKVYEPETQAIMNFIYSNPFVLSGNLHG 536
S+ G + R NA G +LNR + E +A++ PE + + I++ L ++HG
Sbjct: 239 SVHGNL-RTNAAGANLNREW---XEPDAER--SPEVLVVRDAIHAIGCDLFFDIHG 288
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 53/121 (43%), Gaps = 10/121 (8%)
Query: 49 STELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVAN 108
S E + L V+ P E +G++V+GR V + +PD K +A
Sbjct: 134 SEERHSEFLGAVQQXPQASVVE-LGRTVEGRPXSLVVLG----TPDEAGAAKKKVWIIAR 188
Query: 109 MHGDETVGYALMVFLIQYLV-LKDGKDDRITQ-LLNSTDIYIVPSINPDGFAAAKEGNLN 166
H E+ + L++ LV D D + + L + YIVP+ NPDG + GNL
Sbjct: 189 QHPGESXAEWFIEGLVKRLVGWGDWSGDPVARKLYDHATFYIVPNXNPDG---SVHGNLR 245
Query: 167 T 167
T
Sbjct: 246 T 246
>pdb|4AXV|A Chain A, Biochemical And Structural Characterization Of The Mpaa
Amidase As Part Of A Conserved Scavenging Pathway For
Peptidoglycan Derived Peptides In Gamma-Proteobacteria
Length = 243
Score = 32.3 bits (72), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 39/93 (41%), Gaps = 24/93 (25%)
Query: 420 VANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFAAAKEGKC 479
+A HGDET A + ++ L + K D ++ S NPD A + G
Sbjct: 51 LAGTHGDETASIAGLSCALRSLPAECLKHD------------VILSXNPD---ANQLGT- 94
Query: 480 DSLDGYVGRKNAHGVDLNRNFPDQFEYEAKKVY 512
R NA+ VDLNR FP Q E VY
Sbjct: 95 --------RANANQVDLNRAFPTQNWTEHGTVY 119
>pdb|2QVP|A Chain A, Crystal Structure Of A Putative Metallopeptidase
(Sama_0725) From Shewanella Amazonensis Sb2b At 2.00 A
Resolution
pdb|2QVP|B Chain B, Crystal Structure Of A Putative Metallopeptidase
(Sama_0725) From Shewanella Amazonensis Sb2b At 2.00 A
Resolution
pdb|2QVP|C Chain C, Crystal Structure Of A Putative Metallopeptidase
(Sama_0725) From Shewanella Amazonensis Sb2b At 2.00 A
Resolution
Length = 275
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 12/76 (15%)
Query: 90 VDSPDGRTLMKPMFKYVANMHGDETVG-YALMVFLIQYLVLKDGKDDRITQLLNSTDIYI 148
+ SP G+ P A HG+E+ G + L+ FL Q DG +L ++ +
Sbjct: 56 LQSP-GQKAGLPNLLISAGFHGEESAGPWGLLHFLSQL----DG------ELFKRVNLSV 104
Query: 149 VPSINPDGFAAAKEGN 164
+P +NP GFA N
Sbjct: 105 LPLVNPTGFAKGHRFN 120
>pdb|1JQP|A Chain A, Dipeptidyl Peptidase I (Cathepsin C), A Tetrameric
Cysteine Protease Of The Papain Family
Length = 438
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 545 SRNPMMAPGHACGFDFKDGITNGNYWYKVTGG-MQDFNYVHSNCFEITMELSCCKYPKAS 603
S+ P+++P +G + Y + G QDF V NCF T + CK PK +
Sbjct: 253 SQTPILSPQEVVSCSPYAQGCDGGFPYLIAGKYAQDFGVVEENCFPYTATDAPCK-PKEN 311
Query: 604 DLKHY 608
L++Y
Sbjct: 312 CLRYY 316
>pdb|2C1C|A Chain A, Structural Basis Of The Resistance Of An Insect
Carboxypeptidase To Plant Protease Inhibitors
pdb|2C1C|B Chain B, Structural Basis Of The Resistance Of An Insect
Carboxypeptidase To Plant Protease Inhibitors
Length = 312
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 15/141 (10%)
Query: 366 LDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEI-THDVDNPDGRTLMKPMFKYVANMH 424
+D ++ + YP + +S +GR + ++I T + ++ + KP+ +H
Sbjct: 12 IDEYLDYIGEKYPDVATVVNAAESFEGRPIKYIKISTTNFEDEN-----KPVIFIDGGIH 66
Query: 425 GDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFAAAKEG-----KC 479
E + + + I LV ++D LL D ++P +NPDG+ K
Sbjct: 67 AREWISPPSVTWAIHKLVEDVTEND----LLEKFDWILLPVVNPDGYKYTFTNERFWRKT 122
Query: 480 DSLDGYVGRKNAHGVDLNRNF 500
S + + G D NRNF
Sbjct: 123 RSTNNNPLSQICRGADGNRNF 143
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 26/131 (19%), Positives = 54/131 (41%), Gaps = 8/131 (6%)
Query: 52 LDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHG 111
+D ++ + YP + +S +GR + ++I+ + + KP+ +H
Sbjct: 12 IDEYLDYIGEKYPDVATVVNAAESFEGRPIKYIKIS----TTNFEDENKPVIFIDGGIHA 67
Query: 112 DETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFAAAKEGNLNTKQKR 171
E + + + I LV ++D LL D ++P +NPDG+ ++ R
Sbjct: 68 REWISPPSVTWAIHKLVEDVTEND----LLEKFDWILLPVVNPDGYKYTFTNERFWRKTR 123
Query: 172 MQDFNYVHSNC 182
+ N + C
Sbjct: 124 STNNNPLSQIC 134
>pdb|3HAE|L Chain L, Rational Development Of High-Affinity T-Cell Receptor-Like
Antibodies
pdb|3HAE|G Chain G, Rational Development Of High-Affinity T-Cell Receptor-Like
Antibodies
pdb|3HAE|N Chain N, Rational Development Of High-Affinity T-Cell Receptor-Like
Antibodies
pdb|3HAE|S Chain S, Rational Development Of High-Affinity T-Cell Receptor-Like
Antibodies
Length = 212
Score = 29.6 bits (65), Expect = 5.8, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 47/115 (40%), Gaps = 17/115 (14%)
Query: 145 DIYIVPSINPDGFAAAKEGNLNTKQ-KRMQDFNYVHSNC---------FEITMELSCCKY 194
D+ I PS PD F+ +K GN + +Q + H C F +++
Sbjct: 52 DVIIRPSGVPDRFSGSKSGNTASLTISGLQAEDEAHYYCWSFAGSYYVFGTGTDVTVLGQ 111
Query: 195 PKASDL-------KHYWAANKESLIKLIENVHRGVYGIVTDTYGNPLPSAIITVR 242
PKA+ ANK +L+ LI + + G + G+P+ + + T +
Sbjct: 112 PKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTK 166
>pdb|3BZY|B Chain B, Crystal Structure Of The Mutated Y316d Escu C-Terminal
Domain
Length = 83
Score = 29.3 bits (64), Expect = 7.1, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 27/49 (55%)
Query: 127 LVLKDGKDDRITQLLNSTDIYIVPSINPDGFAAAKEGNLNTKQKRMQDF 175
LV++ GKD + Q++ ++Y +P I A + + N++ Q +DF
Sbjct: 19 LVIETGKDAKALQIIKLAELYDIPVIEDIPLARSLDKNIHKGQYITEDF 67
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.137 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,604,423
Number of Sequences: 62578
Number of extensions: 1010194
Number of successful extensions: 3148
Number of sequences better than 100.0: 55
Number of HSP's better than 100.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 2973
Number of HSP's gapped (non-prelim): 118
length of query: 710
length of database: 14,973,337
effective HSP length: 106
effective length of query: 604
effective length of database: 8,340,069
effective search space: 5037401676
effective search space used: 5037401676
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)