RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy11074
(710 letters)
>d1uwya2 c.56.5.1 (A:1-296) Carboxypeptidase M, catalytic domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 296
Score = 225 bits (575), Expect = 7e-69
Identities = 133/299 (44%), Positives = 172/299 (57%), Gaps = 40/299 (13%)
Query: 359 RYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDNPDGRTLMKPMFK 418
Y+ ++AF+ ++Y + +IGKSV+GRNLW + + P + P FK
Sbjct: 4 NYHRQEGMEAFLKTVAQNYSSVTHLHSIGKSVKGRNLWVLVVG---RFPKEHRIGIPEFK 60
Query: 419 YVANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFAAAKEGK 478
YVANMHGDETVG L++ LI YLV DGKD IT L+NST I+I+PS+NPDGF A K+
Sbjct: 61 YVANMHGDETVGRELLLHLIDYLVTSDGKDPEITNLINSTRIHIMPSMNPDGFEAVKKPD 120
Query: 479 CDSLDGYVGRKNAHGVDLNRNFPDQFEYEAKKVYEPETQAIMNFIYSNPFVLSGNLHGGA 538
C G +N + DLNRNFPD FEY +PET A+M ++ + FVLS NLHGGA
Sbjct: 121 CYYSIGR---ENYNQYDLNRNFPDAFEYNNVSR-QPETVAVMKWLKTETFVLSANLHGGA 176
Query: 539 -------------------------------VARDYASRNPMMAPGHAC--GFDFKDGIT 565
+A YASRNP M G C +F +G+T
Sbjct: 177 LVASYPFDNGVQATGALYSRSLTPDDDVFQYLAHTYASRNPNMKKGDECKNKMNFPNGVT 236
Query: 566 NGNYWYKVTGGMQDFNYVHSNCFEITMELSCCKYPKASDLKHYWAANKESLIKLIENVH 624
NG WY + GGMQD+NY+ + CFEIT+ELSCCKYP+ L +W NK SLI+ I+ VH
Sbjct: 237 NGYSWYPLQGGMQDYNYIWAQCFEITLELSCCKYPREEKLPSFWNNNKASLIEYIKQVH 295
Score = 96.4 bits (239), Expect = 2e-22
Identities = 66/221 (29%), Positives = 100/221 (45%), Gaps = 17/221 (7%)
Query: 45 RYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFK 104
Y+ ++AF+ ++Y + +IGKSV+GRNLW + + P + P FK
Sbjct: 4 NYHRQEGMEAFLKTVAQNYSSVTHLHSIGKSVKGRNLWVLVVG---RFPKEHRIGIPEFK 60
Query: 105 YVANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFAAAKEGN 164
YVANMHGDETVG L++ LI YLV DGKD IT L+NST I+I+PS+NPDGF A K+ +
Sbjct: 61 YVANMHGDETVGRELLLHLIDYLVTSDGKDPEITNLINSTRIHIMPSMNPDGFEAVKKPD 120
Query: 165 LNTKQKRMQDFNYVHSNCFEITMELSCCKYPKASDLKHYWAANKESLIKLIENVHRGVYG 224
R Y + F E + +++K ++ V
Sbjct: 121 CYYSIGRENYNQYDLNRNFPDAFEYNNV----------SRQPETVAVMKWLKT-ETFVLS 169
Query: 225 IVTDTYGNPLP---SAIITVRWNDKAVTVTNRGEYWRLLAR 262
+ + ++T + ++ LA
Sbjct: 170 ANLHGGALVASYPFDNGVQATGALYSRSLTPDDDVFQYLAH 210
Score = 81.4 bits (200), Expect = 2e-17
Identities = 28/48 (58%), Positives = 36/48 (75%)
Query: 172 MQDFNYVHSNCFEITMELSCCKYPKASDLKHYWAANKESLIKLIENVH 219
MQD+NY+ + CFEIT+ELSCCKYP+ L +W NK SLI+ I+ VH
Sbjct: 248 MQDYNYIWAQCFEITLELSCCKYPREEKLPSFWNNNKASLIEYIKQVH 295
>d1h8la2 c.56.5.1 (A:4-304) Carboxypeptidase D, catalytic domain
{Crested duck (Lophonetta specularioides) [TaxId: 8836]}
Length = 301
Score = 207 bits (528), Expect = 3e-62
Identities = 120/300 (40%), Positives = 173/300 (57%), Gaps = 40/300 (13%)
Query: 359 RYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDNPDGRTLMKPMFK 418
R+++ ++++ F+ + YP + R ++GKSV+ R L+ +EI+ DNP +P FK
Sbjct: 9 RHHHFSDMEIFLRRYANEYPSITRLYSVGKSVELRELYVMEIS---DNPGIHEAGEPEFK 65
Query: 419 YVANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFAAAKEGK 478
Y+ NMHG+E VG L++ LI+YL G D +T L+ ST I+I+PS+NPDG+ ++EG
Sbjct: 66 YIGNMHGNEVVGRELLLNLIEYLCKNFGTDPEVTDLVQSTRIHIMPSMNPDGYEKSQEGD 125
Query: 479 CDSLDGYVGRKNAHGVDLNRNFPDQFEYEAKKVYEPETQAIMNFIYSNPFVLSGNLHGG- 537
G N++ DLNRNFPDQF ++ +PET A+M+++ + PFVLS NLHGG
Sbjct: 126 RGGTVGR---NNSNNYDLNRNFPDQF-FQVTDPPQPETLAVMSWLKTYPFVLSANLHGGS 181
Query: 538 ---------------------------AVARDYASRNPMMAPGHAC-----GFDFKDGIT 565
+A Y+ N M G C F GIT
Sbjct: 182 LVVNYPFDDDEQGIAIYSKSPDDAVFQQLALSYSKENKKMYQGSPCKDLYPTEYFPHGIT 241
Query: 566 NGNYWYKVTGGMQDFNYVHSNCFEITMELSCCKYPKASDLKHYWAANKESLIKLIENVHR 625
NG WY V GGMQD+NY+++NCFE+T+EL C KYPKA +L YW N+ SL++ I+ VHR
Sbjct: 242 NGAQWYNVPGGMQDWNYLNTNCFEVTIELGCVKYPKAEELPKYWEQNRRSLLQFIKQVHR 301
Score = 97.7 bits (242), Expect = 5e-23
Identities = 47/152 (30%), Positives = 82/152 (53%), Gaps = 11/152 (7%)
Query: 45 RYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFK 104
R+++ ++++ F+ + YP + R ++GKSV+ R L+ +EI+ D+P +P FK
Sbjct: 9 RHHHFSDMEIFLRRYANEYPSITRLYSVGKSVELRELYVMEIS---DNPGIHEAGEPEFK 65
Query: 105 YVANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFAAAKEGN 164
Y+ NMHG+E VG L++ LI+YL G D +T L+ ST I+I+PS+NPDG+ +
Sbjct: 66 YIGNMHGNEVVGRELLLNLIEYLCKNFGTDPEVTDLVQSTRIHIMPSMNPDGYEKS---- 121
Query: 165 LNTKQKRMQDFNYVHSNCFEITMELSCCKYPK 196
Q+ + +N + +
Sbjct: 122 ----QEGDRGGTVGRNNSNNYDLNRNFPDQFF 149
Score = 77.2 bits (189), Expect = 4e-16
Identities = 28/49 (57%), Positives = 39/49 (79%)
Query: 172 MQDFNYVHSNCFEITMELSCCKYPKASDLKHYWAANKESLIKLIENVHR 220
MQD+NY+++NCFE+T+EL C KYPKA +L YW N+ SL++ I+ VHR
Sbjct: 253 MQDWNYLNTNCFEVTIELGCVKYPKAEELPKYWEQNRRSLLQFIKQVHR 301
>d1obra_ c.56.5.2 (A:) Carboxypeptidase T {Thermoactinomyces
vulgaris [TaxId: 2026]}
Length = 323
Score = 166 bits (421), Expect = 1e-46
Identities = 74/320 (23%), Positives = 116/320 (36%), Gaps = 49/320 (15%)
Query: 356 DLQRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDNPDGRTLMKP 415
Y+N E+ I +YP++V+ +IGKS +GR LWAV+I+ +V + +P
Sbjct: 5 YDSGYHNYNEMVNKINTVASNYPNIVKKFSIGKSYEGRELWAVKISDNVGTDEN----EP 60
Query: 416 MFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFAAAK 475
Y A H E + + ++ + D RIT L+N+ +IYIV +INPDG
Sbjct: 61 EVLYTALHHAREHLTVEMALYTLDLFTQNYNLDSRITNLVNNREIYIVFNINPDGGEYDI 120
Query: 476 EGKCDSLDGYVGRKN----AHGVDLNRNFPDQFEYEAKKVYEP--------------ETQ 517
+ N G DLNRN+ ++ P ET
Sbjct: 121 SSGSYKSWRKNRQPNSGSSYVGTDLNRNYGYKWGCCGGSSGSPSSETYRGRSAFSAPETA 180
Query: 518 AIMNFIYS------NPFVLSGNLHGGA-------------VARDYASRNPMMAPGHACGF 558
A+ +FI S H + V D + + A
Sbjct: 181 AMRDFINSRVVGGKQQIKTLITFHTYSELILYPYGYTYTDVPSDMTQDDFNVFKTMANTM 240
Query: 559 DFKDGITNGNY--WYKVTGGMQDFNYVHSNCFEITMELSCCK-----YPKASDLKHYWAA 611
+G T Y G M D+ Y F T E+ YP + +
Sbjct: 241 AQTNGYTPQQASDLYITDGDMTDWAYGQHKIFAFTFEMYPTSYNPGFYPPDEVIGRETSR 300
Query: 612 NKESLIKLIENVHRGVYGIV 631
NKE+++ + E Y ++
Sbjct: 301 NKEAVLYVAEKA-DCPYSVI 319
Score = 96.1 bits (238), Expect = 3e-22
Identities = 41/142 (28%), Positives = 68/142 (47%), Gaps = 5/142 (3%)
Query: 42 DLQRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKP 101
Y+N E+ I +YP++V+ +IGKS +GR LWAV+I+ +V + + +P
Sbjct: 5 YDSGYHNYNEMVNKINTVASNYPNIVKKFSIGKSYEGRELWAVKISDNVGTDEN----EP 60
Query: 102 MFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFAAAK 161
Y A H E + + ++ + D RIT L+N+ +IYIV +INPDG
Sbjct: 61 EVLYTALHHAREHLTVEMALYTLDLFTQNYNLDSRITNLVNNREIYIVFNINPDGGEYDI 120
Query: 162 EGNLNTKQKRMQDFNYVHSNCF 183
++ + N S+
Sbjct: 121 SSGSYKSWRKNRQPNS-GSSYV 141
Score = 56.1 bits (134), Expect = 5e-09
Identities = 13/60 (21%), Positives = 23/60 (38%), Gaps = 6/60 (10%)
Query: 172 MQDFNYVHSNCFEITMELSCCK-----YPKASDLKHYWAANKESLIKLIENVHRGVYGIV 226
M D+ Y F T E+ YP + + NKE+++ + E Y ++
Sbjct: 261 MTDWAYGQHKIFAFTFEMYPTSYNPGFYPPDEVIGRETSRNKEAVLYVAEKA-DCPYSVI 319
>d1m4la_ c.56.5.1 (A:) Carboxypeptidase A {Cow (Bos taurus) [TaxId:
9913]}
Length = 307
Score = 154 bits (389), Expect = 1e-42
Identities = 60/314 (19%), Positives = 108/314 (34%), Gaps = 55/314 (17%)
Query: 352 SAGIDLQRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDNPDGRT 411
+ + Y+ E+ F+ V +P LV IG+S +GR ++ ++ + N
Sbjct: 4 TNTFNYATYHTLDEIYDFMDLLVAEHPQLVSKLQIGRSYEGRPIYVLKFSTGGSN----- 58
Query: 412 LMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGF 471
+P +H E + A V+ + G+D T +L+S DI++ NPDGF
Sbjct: 59 --RPAIWIDLGIHSREWITQATGVWFAKKFTEDYGQDPSFTAILDSMDIFLEIVTNPDGF 116
Query: 472 AAAKEGKCDSLDG--YVGRKNAHGVDLNRNFPDQFEYE-------------AKKVYEPET 516
A GVD NRN+ F E E
Sbjct: 117 AFTHSQNRLWRKTRSVTSSSLCVGVDANRNWDAGFGKAGASSSPCSETYHGKYANSEVEV 176
Query: 517 QAIMNFIYSN-PFVLSGNLHGGA----------------------VARDYASRNPMMAPG 553
++I++F+ + F ++H + VA+ + +
Sbjct: 177 KSIVDFVKDHGNFKAFLSIHSYSQLLLYPYGYTTQSIPDKTELNQVAKSAVAALKSL--- 233
Query: 554 HACGFDFKDGITNGNYWYKVTGGMQDFNYVHSNCFEITMELSCCK----YPKASDLKHYW 609
G +K G Y+ +GG D++Y + T EL AS +
Sbjct: 234 --YGTSYKYGSI-ITTIYQASGGSIDWSYNQGIKYSFTFELRDTGRYGFLLPASQIIPTA 290
Query: 610 AANKESLIKLIENV 623
++ ++E+
Sbjct: 291 QETWLGVLTIMEHT 304
Score = 91.8 bits (227), Expect = 6e-21
Identities = 34/148 (22%), Positives = 61/148 (41%), Gaps = 10/148 (6%)
Query: 38 SAGIDLQRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRT 97
+ + Y+ E+ F+ V +P LV IG+S +GR ++ ++ + +
Sbjct: 4 TNTFNYATYHTLDEIYDFMDLLVAEHPQLVSKLQIGRSYEGRPIYVLKFSTGGSN----- 58
Query: 98 LMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGF 157
+P +H E + A V+ + G+D T +L+S DI++ NPDGF
Sbjct: 59 --RPAIWIDLGIHSREWITQATGVWFAKKFTEDYGQDPSFTAILDSMDIFLEIVTNPDGF 116
Query: 158 AAAKEGNLNTKQKRMQDFNYVHSNCFEI 185
A N ++ R S C +
Sbjct: 117 AFTHSQNRLWRKTRS---VTSSSLCVGV 141
Score = 42.1 bits (98), Expect = 1e-04
Identities = 8/51 (15%), Positives = 17/51 (33%), Gaps = 4/51 (7%)
Query: 172 MQDFNYVHSNCFEITMELSCCK----YPKASDLKHYWAANKESLIKLIENV 218
D++Y + T EL AS + ++ ++E+
Sbjct: 254 SIDWSYNQGIKYSFTFELRDTGRYGFLLPASQIIPTAQETWLGVLTIMEHT 304
>d1ayea1 c.56.5.1 (A:1-309) Carboxypeptidase A {Human (Homo sapiens)
[TaxId: 9606]}
Length = 307
Score = 153 bits (387), Expect = 4e-42
Identities = 65/314 (20%), Positives = 109/314 (34%), Gaps = 46/314 (14%)
Query: 352 SAGIDLQRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDNPDGRT 411
S + Y+ E+ + V +P LV IG S + R + ++ + D
Sbjct: 3 SGNFNFGAYHTLEEISQEMDNLVAEHPGLVSKVNIGSSFENRPMNVLKFSTGGD------ 56
Query: 412 LMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGF 471
KP A +H E V A ++ +V GKD IT +L++ DI+++P NPDG+
Sbjct: 57 --KPAIWLDAGIHAREWVTQATALWTANKIVSDYGKDPSITSILDALDIFLLPVTNPDGY 114
Query: 472 AAAKEGKCDSLDG--YVGRKNAHGVDLNRNFPDQFEYEAKKVY-------------EPET 516
++ V GVD NRN+ F E E
Sbjct: 115 VFSQTKNRMWRKTRSKVSGSLCVGVDPNRNWDAGFGGPGASSNPCSDSYHGPSANSEVEV 174
Query: 517 QAIMNFIYSNP-FVLSGNLHGGAVAR----DYASRNPMM-------------APGHACGF 558
++I++FI S+ LH + Y + G
Sbjct: 175 KSIVDFIKSHGKVKAFIILHSYSQLLMFPYGYKCTKLDDFDELSEVAQKAAQSLRSLHGT 234
Query: 559 DFKDGITNGNYWYKVTGGMQDFNYVHSNCFEITMEL---SCCKY-PKASDLKHYWAANKE 614
+K G + Y+ +GG D++Y + + EL + A +
Sbjct: 235 KYKVG-PICSVIYQASGGSIDWSYDYGIKYSFAFELRDTGRYGFLLPARQILPTAEETWL 293
Query: 615 SLIKLIENVHRGVY 628
L ++E+V Y
Sbjct: 294 GLKAIMEHVRDHPY 307
Score = 92.6 bits (229), Expect = 3e-21
Identities = 37/146 (25%), Positives = 61/146 (41%), Gaps = 11/146 (7%)
Query: 38 SAGIDLQRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRT 97
S + Y+ E+ + V +P LV IG S + R + ++ + D
Sbjct: 3 SGNFNFGAYHTLEEISQEMDNLVAEHPGLVSKVNIGSSFENRPMNVLKFSTGGD------ 56
Query: 98 LMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGF 157
KP A +H E V A ++ +V GKD IT +L++ DI+++P NPDG+
Sbjct: 57 --KPAIWLDAGIHAREWVTQATALWTANKIVSDYGKDPSITSILDALDIFLLPVTNPDGY 114
Query: 158 AAAKEGNLNTKQKRMQDFNYVHSNCF 183
++ N + R S C
Sbjct: 115 VFSQTKN---RMWRKTRSKVSGSLCV 137
Score = 39.8 bits (92), Expect = 7e-04
Identities = 9/56 (16%), Positives = 18/56 (32%), Gaps = 4/56 (7%)
Query: 172 MQDFNYVHSNCFEITMEL---SCCKY-PKASDLKHYWAANKESLIKLIENVHRGVY 223
D++Y + + EL + A + L ++E+V Y
Sbjct: 252 SIDWSYDYGIKYSFAFELRDTGRYGFLLPARQILPTAEETWLGLKAIMEHVRDHPY 307
>d2bo9a1 c.56.5.1 (A:4-307) Carboxypeptidase A {Human (Homo sapiens)
[TaxId: 9606]}
Length = 305
Score = 148 bits (375), Expect = 1e-40
Identities = 56/316 (17%), Positives = 106/316 (33%), Gaps = 54/316 (17%)
Query: 352 SAGIDLQRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDNPDGRT 411
S + Y++ + + +P L R IG S + R ++ ++ + G+
Sbjct: 1 SNNFNYGAYHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFS------TGKG 54
Query: 412 LMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGF 471
+ +P A +H E + A ++ + +V +D IT +L DI+++P NPDG+
Sbjct: 55 VRRPAVWLNAGIHSREWISQATAIWTARKIVSDYQRDPAITSILEKMDIFLLPVANPDGY 114
Query: 472 AAAKEGKCDSLDG--YVGRKNAHGVDLNRNFPDQFEYE-------------AKKVYEPET 516
+ + G D NRN+ F + E E
Sbjct: 115 VYTQTQNRLWRKTRSRNPGSSCIGADPNRNWNASFAGKGASDNPCSEVYHGPHANSEVEV 174
Query: 517 QAIMNFIYSNP-FVLSGNLHGGA----------------------VARDYASRNPMMAPG 553
+++++FI + F +LH + VAR A ++
Sbjct: 175 KSVVDFIQKHGNFKGFIDLHSYSQLLMYPYGYSVKKAPDAEELDKVARLAAKALASVSG- 233
Query: 554 HACGFDFKDGITNGNYWYKVTGGMQDFNYVHSNCFEITMELS---CCKY-PKASDLKHYW 609
Y +G D+ Y + F T EL + A+ +
Sbjct: 234 -----TEYQVGPTCTTVYPASGSSIDWAYDNGIKFAFTFELRDTGTYGFLLPANQIIPTA 288
Query: 610 AANKESLIKLIENVHR 625
L ++E+V
Sbjct: 289 EETWLGLKTIMEHVRD 304
Score = 91.1 bits (225), Expect = 1e-20
Identities = 31/146 (21%), Positives = 62/146 (42%), Gaps = 9/146 (6%)
Query: 38 SAGIDLQRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRT 97
S + Y++ + + +P L R IG S + R ++ ++ + G+
Sbjct: 1 SNNFNYGAYHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFS------TGKG 54
Query: 98 LMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGF 157
+ +P A +H E + A ++ + +V +D IT +L DI+++P NPDG+
Sbjct: 55 VRRPAVWLNAGIHSREWISQATAIWTARKIVSDYQRDPAITSILEKMDIFLLPVANPDGY 114
Query: 158 AAAKEGNLNTKQKRMQDFNYVHSNCF 183
+ N ++ R S+C
Sbjct: 115 VYTQTQNRLWRKTR---SRNPGSSCI 137
Score = 37.2 bits (85), Expect = 0.006
Identities = 10/53 (18%), Positives = 18/53 (33%), Gaps = 4/53 (7%)
Query: 172 MQDFNYVHSNCFEITMELS---CCKY-PKASDLKHYWAANKESLIKLIENVHR 220
D+ Y + F T EL + A+ + L ++E+V
Sbjct: 252 SIDWAYDNGIKFAFTFELRDTGTYGFLLPANQIIPTAEETWLGLKTIMEHVRD 304
>d1jqga1 c.56.5.1 (A:1-310) Carboxypeptidase A {Cotton bollworm
(Helicoverpa armigera) [TaxId: 29058]}
Length = 317
Score = 136 bits (342), Expect = 5e-36
Identities = 61/285 (21%), Positives = 107/285 (37%), Gaps = 46/285 (16%)
Query: 349 DADSAGIDLQRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDNPD 408
++ + + + ++ E+DA++ + K +P++V GKS +GR++ + I+ +
Sbjct: 1 NSTRSRLSFDKIHSYEEVDAYLQELAKEFPNVVTVVEGGKSFEGRSIKYLRIS----TTN 56
Query: 409 GRTLMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINP 468
+ KP+ + +H E V ++ I LV D + L+N+ D I+P NP
Sbjct: 57 FQDASKPVVMMQSLLHCREWVTLPATLYAIHKLV----IDVTESDLINNIDWIILPVANP 112
Query: 469 DGFAAAKEGKCDSL----DGYVGRKNAHGVDLNRNFPDQFEYEAKKVY------------ 512
DG+ G GY+ GVDLNRNF + +
Sbjct: 113 DGYVHTFGGDRYWRKNRATGYMAGNLCMGVDLNRNFGMNWGTASSSSVCSDTFHGRSAFS 172
Query: 513 EPETQAIMNFI--YSNPFVLSGNLHGGAVARDYASRNPMMAPGHA--------------- 555
EPE+ I + I + N L ++H Y N ++
Sbjct: 173 EPESSVIRDIIAEHRNRMALYLDIHSFGSMILYGYGNGVLPSNALQLHLIGVQMAQAIDR 232
Query: 556 ----CGFDFKDGITNGNYWYKVTGGMQDFNYVHSNCFEITMELSC 596
D+ G + Y +GG D+ + F T EL
Sbjct: 233 VKWSSNKDYIVGNIF-HVLYAASGGASDYAMQAAAPFSYTYELPA 276
Score = 96.0 bits (238), Expect = 3e-22
Identities = 33/154 (21%), Positives = 71/154 (46%), Gaps = 9/154 (5%)
Query: 35 DADSAGIDLQRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPD 94
++ + + + ++ E+DA++ + K +P++V GKS +GR++ + I+ + +
Sbjct: 1 NSTRSRLSFDKIHSYEEVDAYLQELAKEFPNVVTVVEGGKSFEGRSIKYLRIS----TTN 56
Query: 95 GRTLMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINP 154
+ KP+ + +H E V ++ I LV D + L+N+ D I+P NP
Sbjct: 57 FQDASKPVVMMQSLLHCREWVTLPATLYAIHKLV----IDVTESDLINNIDWIILPVANP 112
Query: 155 DGFAAAKEGNLNTKQKRMQDFNYVHSNCFEITME 188
DG+ G+ ++ R + C + +
Sbjct: 113 DGYVHTFGGDRYWRKNR-ATGYMAGNLCMGVDLN 145
>d2c1ca1 c.56.5.1 (A:7-309) Carboxypeptidase B {Corn earworm
(Helicoverpa zea) [TaxId: 7113]}
Length = 312
Score = 129 bits (324), Expect = 1e-33
Identities = 48/284 (16%), Positives = 88/284 (30%), Gaps = 52/284 (18%)
Query: 355 IDLQRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDNPDGRTLMK 414
+ Y +D ++ + YP + +S +GR + ++I+ + K
Sbjct: 1 LPYDNYQELEVIDEYLDYIGEKYPDVATVVNAAESFEGRPIKYIKIS----TTNFEDENK 56
Query: 415 PMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFAAA 474
P+ +H E + + + I LV +D LL D ++P +NPDG+
Sbjct: 57 PVIFIDGGIHAREWISPPSVTWAIHKLV----EDVTENDLLEKFDWILLPVVNPDGYKYT 112
Query: 475 KE-----GKCDSLDGYVGRKNAHGVDLNRNFPDQFEYEAKKVY-------------EPET 516
K S + + G D NRNF + E ET
Sbjct: 113 FTNERFWRKTRSTNNNPLSQICRGADGNRNFDFVWNSIGTSNSPCSDIYAGTSAFSEVET 172
Query: 517 QAIMNFIYSNP--FVLSGNLHGG----------------------AVARDYASRNPMMAP 552
+ + + ++ + L +H V AS A
Sbjct: 173 RVVRDILHEHLARMALYLTMHSFGSMILYPWGHDGSLSQNALGLHTVGVAMASVIQSNAL 232
Query: 553 GHACGFDFKDGITNGNYWYKVTGGMQDFNYVHSNCFEITMELSC 596
+ + G + Y + G +D+ + T EL
Sbjct: 233 PNFPPYTV--GNSALVIGYYIAGSSEDYAHSIGVPLSYTYELPG 274
Score = 89.8 bits (222), Expect = 4e-20
Identities = 27/143 (18%), Positives = 55/143 (38%), Gaps = 8/143 (5%)
Query: 41 IDLQRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMK 100
+ Y +D ++ + YP + +S +GR + ++I+ + + K
Sbjct: 1 LPYDNYQELEVIDEYLDYIGEKYPDVATVVNAAESFEGRPIKYIKIS----TTNFEDENK 56
Query: 101 PMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFAAA 160
P+ +H E + + + I LV +D LL D ++P +NPDG+
Sbjct: 57 PVIFIDGGIHAREWISPPSVTWAIHKLV----EDVTENDLLEKFDWILLPVVNPDGYKYT 112
Query: 161 KEGNLNTKQKRMQDFNYVHSNCF 183
++ R + N + C
Sbjct: 113 FTNERFWRKTRSTNNNPLSQICR 135
>d1z5ra1 c.56.5.1 (A:6-308) Carboxypeptidase B {Pig (Sus scrofa)
[TaxId: 9823]}
Length = 304
Score = 127 bits (319), Expect = 4e-33
Identities = 55/313 (17%), Positives = 98/313 (31%), Gaps = 56/313 (17%)
Query: 354 GIDLQRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDNPDGRTLM 413
G ++Y N ++A+ + P L+ IG + G N++ +++ N
Sbjct: 1 GHSYEKYNNWETIEAWTKQVTSENPDLISRTAIGTTFLGNNIYLLKVGKPGPN------- 53
Query: 414 KPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFAA 473
KP H E + +A + ++ VL G + +T+ LN D Y++P +N DG+
Sbjct: 54 KPAIFMDCGFHAREWISHAFCQWFVREAVLTYGYESHMTEFLNKLDFYVLPVLNIDGYIY 113
Query: 474 AKEGKCDSLDG--YVGRKNAHGVDLNRNFPDQFEYEAKKVY-------------EPETQA 518
G D NRNF + E ET+A
Sbjct: 114 TWTKNRMWRKTRSTNAGTTCIGTDPNRNFDAGWCTTGASTDPCDETYCGSAAESEKETKA 173
Query: 519 IMNFIYSNP--FVLSGNLHGGA----------------------VARDYASRNPMMAPGH 554
+ +FI +N +H + +A+ +
Sbjct: 174 LADFIRNNLSSIKAYLTIHSYSQMILYPYSYDYKLPENNAELNNLAKAAVKELATL---- 229
Query: 555 ACGFDFKDGITNGNYWYKVTGGMQDFNYVHSNCFEITMEL----SCCKYPKASDLKHYWA 610
G + G Y GG D+ Y + T EL S ++
Sbjct: 230 -YGTKYTYG-PGATTIYPAAGGSDDWAYDQGIKYSFTFELRDKGRYGFILPESQIQATCE 287
Query: 611 ANKESLIKLIENV 623
++ + V
Sbjct: 288 ETMLAIKYVTNYV 300
Score = 83.7 bits (206), Expect = 3e-18
Identities = 30/144 (20%), Positives = 59/144 (40%), Gaps = 10/144 (6%)
Query: 40 GIDLQRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLM 99
G ++Y N ++A+ + P L+ IG + G N++ +++ +
Sbjct: 1 GHSYEKYNNWETIEAWTKQVTSENPDLISRTAIGTTFLGNNIYLLKVGKPGPN------- 53
Query: 100 KPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFAA 159
KP H E + +A + ++ VL G + +T+ LN D Y++P +N DG+
Sbjct: 54 KPAIFMDCGFHAREWISHAFCQWFVREAVLTYGYESHMTEFLNKLDFYVLPVLNIDGYIY 113
Query: 160 AKEGNLNTKQKRMQDFNYVHSNCF 183
N ++ R + C
Sbjct: 114 TWTKNRMWRKTR---STNAGTTCI 134
Score = 30.2 bits (67), Expect = 0.83
Identities = 7/51 (13%), Positives = 14/51 (27%), Gaps = 4/51 (7%)
Query: 172 MQDFNYVHSNCFEITMEL----SCCKYPKASDLKHYWAANKESLIKLIENV 218
D+ Y + T EL S ++ ++ + V
Sbjct: 250 SDDWAYDQGIKYSFTFELRDKGRYGFILPESQIQATCEETMLAIKYVTNYV 300
>d1h8la1 b.3.2.1 (A:305-383) Carboxypeptidase D C-terminal domain
{Crested duck (Lophonetta specularioides) [TaxId: 8836]}
Length = 79
Score = 47.5 bits (112), Expect = 1e-07
Identities = 33/77 (42%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 221 GVYGIVTD-TYGNPLPSAIITVRWNDKAVTVTNRGEYWRLLARGKYVVTASAPGYEPVTT 279
G++G V D T G + +A I+V + VT G+YWRLL +G Y VTASA GY+PVT
Sbjct: 1 GIWGFVLDATDGRGILNATISVADINHPVTTYKDGDYWRLLVQGTYKVTASARGYDPVTK 60
Query: 280 EPLDVPDTESVRLDFML 296
++V V+++F L
Sbjct: 61 T-VEVDSKGGVQVNFTL 76
Score = 47.5 bits (112), Expect = 1e-07
Identities = 33/77 (42%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 626 GVYGIVTD-TYGNPLPSAIITVRWNDKAVTVTNRGEYWRLLARGKYVVTASAPGYEPVTT 684
G++G V D T G + +A I+V + VT G+YWRLL +G Y VTASA GY+PVT
Sbjct: 1 GIWGFVLDATDGRGILNATISVADINHPVTTYKDGDYWRLLVQGTYKVTASARGYDPVTK 60
Query: 685 EPLDVPDTESVRLDFML 701
++V V+++F L
Sbjct: 61 T-VEVDSKGGVQVNFTL 76
>d1uwya1 b.3.2.1 (A:297-403) Carboxypeptidase M C-terminal domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 107
Score = 44.8 bits (105), Expect = 2e-06
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Query: 221 GVYGIVTDTYGNPLPSAIITVR--WNDKAVTVTNRGEYWRLLARGKYVVTASAPGYEPVT 278
GV G V D GNPLP+ I+ V+ + GEY+ LL G Y++ + PG++P
Sbjct: 1 GVKGQVFDQNGNPLPNVIVEVQDRKHICPYRTNKYGEYYLLLLPGSYIINVTVPGHDPHI 60
Query: 279 TE---PLDVPDTESVRLDFMLGKKNAFSIDQLKNPFIEIMTL 317
T+ P + +++ D +L + + NP ++ L
Sbjct: 61 TKVIIPEKSQNFSALKKDILLPFQGQLDSIPVSNPSCPMIPL 102
Score = 44.4 bits (104), Expect = 2e-06
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 626 GVYGIVTDTYGNPLPSAIITVR--WNDKAVTVTNRGEYWRLLARGKYVVTASAPGYEPVT 683
GV G V D GNPLP+ I+ V+ + GEY+ LL G Y++ + PG++P
Sbjct: 1 GVKGQVFDQNGNPLPNVIVEVQDRKHICPYRTNKYGEYYLLLLPGSYIINVTVPGHDPHI 60
Query: 684 TE---PLDVPDTESVRLDFML 701
T+ P + +++ D +L
Sbjct: 61 TKVIIPEKSQNFSALKKDILL 81
>d1yw4a1 c.56.5.7 (A:2-332) Succinylglutamate desuccinylase AstE
{Chromobacterium violaceum [TaxId: 536]}
Length = 331
Score = 37.3 bits (86), Expect = 0.004
Identities = 25/189 (13%), Positives = 42/189 (22%), Gaps = 53/189 (28%)
Query: 405 DNPDGRTLMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVP 464
D +++ +HG+ET ++ ++ D L +V
Sbjct: 41 DARGADSVL-----LSCGVHGNETAPIEVVDGMLT---------DIAAGQLALNCRLLVM 86
Query: 465 SINPDGFAAAKEGKCDSLDGYVGRKNAHGVDLNRNFP-----DQFEYEAKKVYEPETQAI 519
N D Y D+NR F E+ + E E
Sbjct: 87 FANLDAIRQGVR--------YGNY------DMNRLFNGAHARHPELPESVRAAELE-TLA 131
Query: 520 MNFI-------------------YSNPFVLSGNLHGGAVARDYASRNPMMAPGHACGFDF 560
F F + LH G + A
Sbjct: 132 AEFFAGARARKLHYDLHTAIRGSVFEKFAIYPFLHDGRTHKREQLAWLQRCGIEAVLLHT 191
Query: 561 KDGITNGNY 569
+ T +
Sbjct: 192 QPANTFSYF 200
Score = 32.7 bits (74), Expect = 0.12
Identities = 11/79 (13%), Positives = 24/79 (30%), Gaps = 17/79 (21%)
Query: 91 DSPDGRTLMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVP 150
D+ +++ +HG+ET ++ ++ D L +V
Sbjct: 41 DARGADSVL-----LSCGVHGNETAPIEVVDGMLT---------DIAAGQLALNCRLLVM 86
Query: 151 SINPDGFAAAK---EGNLN 166
N D ++N
Sbjct: 87 FANLDAIRQGVRYGNYDMN 105
>d2g9da1 c.56.5.7 (A:3-342) Succinylglutamate desuccinylase AstE
{Vibrio cholerae [TaxId: 666]}
Length = 340
Score = 37.3 bits (86), Expect = 0.006
Identities = 15/104 (14%), Positives = 33/104 (31%), Gaps = 28/104 (26%)
Query: 399 EITHDVDNPDGRTLMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNST 458
E+ + + ++ +HGDET + L+ + DD ++
Sbjct: 41 EVIPAQTDAATKNMV-----ISCGIHGDETAP----MELLDKWI-----DDIVSGFQPVA 86
Query: 459 DIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAHGVDLNRNFPD 502
+ + +P ++ + +LNR F D
Sbjct: 87 ERCLFIMAHPQATVRHVR--------FIEQ------NLNRLFDD 116
Score = 34.2 bits (78), Expect = 0.041
Identities = 14/85 (16%), Positives = 27/85 (31%), Gaps = 17/85 (20%)
Query: 85 EITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNST 144
E+ + ++ +HGDET + L+ + DD ++
Sbjct: 41 EVIPAQTDAATKNMV-----ISCGIHGDETAP----MELLDKWI-----DDIVSGFQPVA 86
Query: 145 DIYIVPSINPDGFAAAK---EGNLN 166
+ + +P E NLN
Sbjct: 87 ERCLFIMAHPQATVRHVRFIEQNLN 111
>d1yw6a1 c.56.5.7 (A:1-322) Succinylglutamate desuccinylase AstE
{Escherichia coli [TaxId: 562]}
Length = 322
Score = 36.6 bits (84), Expect = 0.009
Identities = 31/206 (15%), Positives = 58/206 (28%), Gaps = 46/206 (22%)
Query: 420 VANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFAAAKEGKC 479
A +HG+ET V ++ L+ + +V NP K
Sbjct: 49 SAGIHGNETAP----VEMLDALL-----GAISHGEIPLRWRLLVILGNPPALKQGKRYC- 98
Query: 480 DSLDGYVGRKNAHGVDLNRNFPDQFE--------YEAKKVYEPETQAIMNFIYSNPFVLS 531
D+NR F +++ A+++ + S + L
Sbjct: 99 -------------HSDMNRMFGGRWQLFAESGETCRARELEQCLEDFYDQGKESVRWHLD 145
Query: 532 GNLHGGAVARDYASRNPMMAPGHACGFDFKD---------GITNGNYWYKVTGGMQDFNY 582
LH S +P + + G+ + + G F+
Sbjct: 146 --LHTAI----RGSLHPQFGVLPQRDIPWDEKFLTWLGAAGLEALVFHQEPGGTFTHFSA 199
Query: 583 VHSNCFEITMELSCCKYPKASDLKHY 608
H T+EL +DL+ +
Sbjct: 200 RHFGALACTLELGKALPFGQNDLRQF 225
Score = 31.2 bits (70), Expect = 0.38
Identities = 12/64 (18%), Positives = 21/64 (32%), Gaps = 12/64 (18%)
Query: 106 VANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFAAAK---E 162
A +HG+ET V ++ L+ + +V NP K
Sbjct: 49 SAGIHGNETAP----VEMLDALL-----GAISHGEIPLRWRLLVILGNPPALKQGKRYCH 99
Query: 163 GNLN 166
++N
Sbjct: 100 SDMN 103
>d2bcoa1 c.56.5.7 (A:4-342) Succinylglutamate desuccinylase AstE
{Vibrio parahaemolyticus [TaxId: 670]}
Length = 339
Score = 33.4 bits (76), Expect = 0.090
Identities = 26/233 (11%), Positives = 57/233 (24%), Gaps = 48/233 (20%)
Query: 399 EITHDVDNPDGRTLMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNST 458
E+ + + + ++ +HGDET + L+ ++ D +
Sbjct: 40 EVIPENPTQETKNII-----ISCGIHGDETAP----MELVDSII-----KDIESGFQKVD 85
Query: 459 DIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAHGVDLNRNFP-----DQFEYEAKKVYE 513
+ +P+ A ++ +LNR F E +
Sbjct: 86 ARCLFIIAHPESTLAHTR--------FLEE------NLNRLFDEKEHEPTKELAIADTLK 131
Query: 514 PETQAIMNFIYSNPFVLSGNLHGGAVARDYASRNPMMAPGHACGFDFKD----------G 563
+ LH S++ A +
Sbjct: 132 LLVRDFYQDTEPKTRWHLD-LHCAIR----GSKHYTFAVSPKTRHPVRSKALVDFLDSAH 186
Query: 564 ITNGNYWYKVTGGMQDFNYVHSNCFEITMELSCCKYPKASDLKHYWAANKESL 616
I + ++ + + +TMEL + L A +
Sbjct: 187 IEAVLLSNSPSSTFSWYSAENYSAQALTMELGRVARIGENALDRLTAFDLALR 239
Score = 32.3 bits (73), Expect = 0.20
Identities = 14/85 (16%), Positives = 30/85 (35%), Gaps = 17/85 (20%)
Query: 85 EITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNST 144
E+ + + + + ++ +HGDET + L+ ++ D +
Sbjct: 40 EVIPENPTQETKNII-----ISCGIHGDETAP----MELVDSII-----KDIESGFQKVD 85
Query: 145 DIYIVPSINPDGFAAAK---EGNLN 166
+ +P+ A E NLN
Sbjct: 86 ARCLFIIAHPESTLAHTRFLEENLN 110
>d2gu2a1 c.56.5.7 (A:4-310) Aspartoacylase AspA {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 307
Score = 31.8 bits (72), Expect = 0.24
Identities = 15/82 (18%), Positives = 23/82 (28%), Gaps = 24/82 (29%)
Query: 420 VANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFAAAKEGKC 479
HG+E G VFL+ + + ++ + NP
Sbjct: 13 FGGTHGNELTG----VFLVTHWL------KNGAEVHRAGLEVKPFITNPRAVEKCTR--- 59
Query: 480 DSLDGYVGRKNAHGVDLNRNFP 501
Y+ DLNR F
Sbjct: 60 -----YIDC------DLNRVFD 70
Score = 29.9 bits (67), Expect = 1.1
Identities = 11/64 (17%), Positives = 20/64 (31%), Gaps = 13/64 (20%)
Query: 106 VANMHGDETVGYALMVFLIQYLVLKDGKDDRITQLLNSTDIYIVPSINPDGFAAAK---E 162
HG+E G VFL+ + + ++ + NP +
Sbjct: 13 FGGTHGNELTG----VFLVTHWL------KNGAEVHRAGLEVKPFITNPRAVEKCTRYID 62
Query: 163 GNLN 166
+LN
Sbjct: 63 CDLN 66
>d1cwva1 b.1.14.1 (A:503-596) Invasin {Yersinia pseudotuberculosis
[TaxId: 633]}
Length = 94
Score = 29.0 bits (65), Expect = 0.46
Identities = 15/58 (25%), Positives = 18/58 (31%), Gaps = 9/58 (15%)
Query: 225 IVTDTYGNPLPSAIITVRWNDKA------VTVTNRGEYWRLLAR---GKYVVTASAPG 273
V D G PL + + N+ A G L G VVTA G
Sbjct: 25 TVADFEGKPLAGQEVVITTNNGALPNKITEKTDANGVARIALTNTTDGVTVVTAEVEG 82
Score = 29.0 bits (65), Expect = 0.46
Identities = 15/58 (25%), Positives = 18/58 (31%), Gaps = 9/58 (15%)
Query: 630 IVTDTYGNPLPSAIITVRWNDKA------VTVTNRGEYWRLLAR---GKYVVTASAPG 678
V D G PL + + N+ A G L G VVTA G
Sbjct: 25 TVADFEGKPLAGQEVVITTNNGALPNKITEKTDANGVARIALTNTTDGVTVVTAEVEG 82
>d1s5ja2 e.8.1.1 (A:450-864) Family B DNA polymerase {Sulfolobus
solfataricus [TaxId: 2287]}
Length = 415
Score = 31.1 bits (69), Expect = 0.54
Identities = 19/131 (14%), Positives = 35/131 (26%), Gaps = 19/131 (14%)
Query: 188 ELSCCKYPKASDLKHYWAANKESLIKLIENVHRGVYGIVTDTYGNPLPSAIITVRWNDKA 247
++ K +K + K L E + + D Y P +
Sbjct: 297 DVKEIKRKIVDVVKGSYEKLKNKGYNLDELAFKVMLSKPLDAYKKNTPQHVKAALQLRPF 356
Query: 248 VTVTNRGEYWRLLARGKYVVTASAPGYEPVTTEPLDVPDTESVRLDFMLGKKNAFSIDQL 307
+ YV S G +PV + D E ++ L
Sbjct: 357 GVNVLPRD------IIYYVKVRSKDGVKPVQLAKVTEIDAE-------------KYLEAL 397
Query: 308 KNPFIEIMTLI 318
++ F +I+
Sbjct: 398 RSTFEQILRAF 408
>d1o1za_ c.1.18.3 (A:) Hypothetical protein TM1621 {Thermotoga
maritima [TaxId: 2336]}
Length = 226
Score = 29.3 bits (64), Expect = 1.3
Identities = 11/61 (18%), Positives = 23/61 (37%), Gaps = 4/61 (6%)
Query: 169 QKRMQDFNYVHSNCFEITMELSCCKYPKASDLK-HYWAANKESLIKLIENVHRGVYGIVT 227
+K +V FE+ + + + + W N + + I R + G++T
Sbjct: 160 EKERPYSLHVPYQAFELEYAVEVLRSFRKKGIVIFVWTLNDPEIYRKIR---REIDGVIT 216
Query: 228 D 228
D
Sbjct: 217 D 217
Score = 28.5 bits (62), Expect = 2.3
Identities = 13/86 (15%), Positives = 30/86 (34%), Gaps = 4/86 (4%)
Query: 549 MMAPGHACGFDFKDGITNGNYWYKVTGGMQDFNYVHSNCFEITMELSCCKYPKASDLK-H 607
+ D ++ + N+ +V +V FE+ + + + +
Sbjct: 135 FKGTKYGYLIDEENYGSIENFVERVEKERPYSLHVPYQAFELEYAVEVLRSFRKKGIVIF 194
Query: 608 YWAANKESLIKLIENVHRGVYGIVTD 633
W N + + I R + G++TD
Sbjct: 195 VWTLNDPEIYRKIR---REIDGVITD 217
>d2giaa1 d.18.1.4 (A:56-221) Guide RNA binding protein gBP25
{Trypanosoma brucei [TaxId: 5691]}
Length = 166
Score = 28.1 bits (62), Expect = 2.4
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Query: 233 PLPSAIITVRWNDKAVTVTNRGEYWRLLARGKYVV 267
LP A V WND+ ++ RG R+L R +VV
Sbjct: 15 QLPPAFDVVHWNDEDIS---RGHLLRVLHRDTFVV 46
Score = 28.1 bits (62), Expect = 2.4
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
Query: 638 PLPSAIITVRWNDKAVTVTNRGEYWRLLARGKYVV 672
LP A V WND+ ++ RG R+L R +VV
Sbjct: 15 QLPPAFDVVHWNDEDIS---RGHLLRVLHRDTFVV 46
>d1nxma_ b.82.1.1 (A:) dTDP-4-dehydrorhamnose 3,5-epimerase RmlC
{Streptococcus suis [TaxId: 1307]}
Length = 194
Score = 28.3 bits (62), Expect = 2.9
Identities = 8/101 (7%), Positives = 24/101 (23%), Gaps = 2/101 (1%)
Query: 554 HACGFDFKDGITNGNYWYKVTGGMQDFNYVHSNCFEITMELSCCKYPKASDLKHYWAANK 613
+ G+ + ++ K +
Sbjct: 62 SFSRKNVLRGLHAEPWDKYISVADGGKVLGTWVDLREGETFGNTYQTVIDASKSIFVPRG 121
Query: 614 ES-LIKLIENVHRGVYGIVTDTYGNPLPSAIITVRWNDKAV 653
+ +++ + Y +V D + L V + D ++
Sbjct: 122 VANGFQVLSDFVAYSY-LVNDYWALELKPKYAFVNYADPSL 161
>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate
reductoisomerase {Zymomonas mobilis [TaxId: 542]}
Length = 150
Score = 27.8 bits (61), Expect = 3.1
Identities = 17/132 (12%), Positives = 30/132 (22%), Gaps = 21/132 (15%)
Query: 495 DLNRNFPDQFEYE---AKKVYEPETQAIMNFIYSNPFVLSGNLHGGAVARDYASRNPMMA 551
DL D+++ A + + A + ++ D +
Sbjct: 20 DLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVI-----ADPSLYNDLKEALAGSS 74
Query: 552 PGHACGFDFKDGITNGNYWYKVTGGMQDFNYVHSNCFEITMELSCCKYPKASDLKHYWAA 611
A G D M + T+ K A
Sbjct: 75 VEAAAGADALVEA----AMMGADWTMAAII--GCAGLKATLAAIRKG-------KTVALA 121
Query: 612 NKESLIKLIENV 623
NKE + I +
Sbjct: 122 NKEDMRTPIGHT 133
>d2c2ia1 d.38.1.4 (A:2-150) Hypothetical protein Rv0130
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 149
Score = 26.6 bits (58), Expect = 6.4
Identities = 9/101 (8%), Positives = 21/101 (20%), Gaps = 9/101 (8%)
Query: 570 WYKVTGGM--------QDFNYVHSNCFEITMELSCCKYPKASDLKHYWAANKESLIKLIE 621
W +T D ++H + + + +
Sbjct: 22 WVTITQEEVNLFADATGDHQWIHVDPERAAAGPFGTTIAHGFMTLALLPRLQHQMYTVKG 81
Query: 622 NVHRGVYGIVTDTYGNP-LPSAIITVRWNDKAVTVTNRGEY 661
YG+ + P + + + V G
Sbjct: 82 VKLAINYGLNKVRFPAPVPVGSRVRATSSLVGVEDLGNGTV 122
Score = 26.2 bits (57), Expect = 8.8
Identities = 7/84 (8%), Positives = 18/84 (21%), Gaps = 1/84 (1%)
Query: 174 DFNYVHSNCFEITMELSCCKYPKASDLKHYWAANKESLIKLIENVHRGVYGIVTDTYGNP 233
D ++H + + + + YG+ + P
Sbjct: 39 DHQWIHVDPERAAAGPFGTTIAHGFMTLALLPRLQHQMYTVKGVKLAINYGLNKVRFPAP 98
Query: 234 -LPSAIITVRWNDKAVTVTNRGEY 256
+ + + V G
Sbjct: 99 VPVGSRVRATSSLVGVEDLGNGTV 122
>d1poca_ a.133.1.1 (A:) Phospholipase A2 {European honeybee (Apis
mellifera) [TaxId: 7460]}
Length = 134
Score = 26.4 bits (58), Expect = 7.8
Identities = 4/19 (21%), Positives = 11/19 (57%)
Query: 175 FNYVHSNCFEITMELSCCK 193
FN + + C+++ ++ C
Sbjct: 88 FNLIDTKCYKLEHPVTGCG 106
Score = 26.4 bits (58), Expect = 7.8
Identities = 4/19 (21%), Positives = 11/19 (57%)
Query: 580 FNYVHSNCFEITMELSCCK 598
FN + + C+++ ++ C
Sbjct: 88 FNLIDTKCYKLEHPVTGCG 106
>d1ejda_ d.68.2.2 (A:) UDP-N-acetylglucosamine enolpyruvyl
transferase (EPT, MurA, MurZ) {Enterobacter cloacae
[TaxId: 550]}
Length = 419
Score = 27.1 bits (59), Expect = 9.1
Identities = 10/106 (9%), Positives = 19/106 (17%), Gaps = 7/106 (6%)
Query: 506 YEAKKVYEPETQAIMNFIYSN---PFVLSGNLHGGAVARDYAS----RNPMMAPGHACGF 558
+ ++G L G + D S M A A G
Sbjct: 120 RPVDLHIFGLEKLGAEIKLEEGYVKASVNGRLKGAHIVMDKVSVGATVTIMSAATLAEGT 179
Query: 559 DFKDGITNGNYWYKVTGGMQDFNYVHSNCFEITMELSCCKYPKASD 604
+ + S + + +
Sbjct: 180 TIIENAAREPEIVDTANFLVALGAKISGQGTDRITIEGVERLGGGV 225
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.137 0.414
Gapped
Lambda K H
0.267 0.0630 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,753,560
Number of extensions: 134223
Number of successful extensions: 395
Number of sequences better than 10.0: 1
Number of HSP's gapped: 358
Number of HSP's successfully gapped: 64
Length of query: 710
Length of database: 2,407,596
Length adjustment: 92
Effective length of query: 618
Effective length of database: 1,144,436
Effective search space: 707261448
Effective search space used: 707261448
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (25.6 bits)