BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11075
(195 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3MN8|A Chain A, Structure Of Drosophila Melanogaster Carboxypeptidase D
Isoform 1b Short
pdb|3MN8|B Chain B, Structure Of Drosophila Melanogaster Carboxypeptidase D
Isoform 1b Short
pdb|3MN8|C Chain C, Structure Of Drosophila Melanogaster Carboxypeptidase D
Isoform 1b Short
pdb|3MN8|D Chain D, Structure Of Drosophila Melanogaster Carboxypeptidase D
Isoform 1b Short
Length = 435
Score = 148 bits (373), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 118/191 (61%), Gaps = 13/191 (6%)
Query: 5 VPSLSLLLCHVTLSTAADYYFDFDDLTGLEDADSAGIDLQRYYNSTE-LDAFILKTVKSY 63
+P+L LL + ++ A G + Q +Y S E L+ K+Y
Sbjct: 1 MPTLGLLFASIGIAVLA---MGVPHCRGYTIKEDESFLQQPHYASQEQLEDLFAGLEKAY 57
Query: 64 PHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFL 123
P+ + +G+S++GRNL A++I+ + S R L+ P KY+ANMHGDETVG L+V++
Sbjct: 58 PNQAKVHFLGRSLEGRNLLALQISRNTRS---RNLLTPPVKYIANMHGDETVGRQLLVYM 114
Query: 124 IQYLVLKDGKDDRIT---KLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAHGV 180
QYL+ G +RI+ +L+NSTDIY+VP++NPDG+A ++EG C+SL YVGR NA +
Sbjct: 115 AQYLL---GNHERISDLGQLVNSTDIYLVPTMNPDGYALSQEGNCESLPNYVGRGNAANI 171
Query: 181 DLNRNFPDQFE 191
DLNR+FPD+ E
Sbjct: 172 DLNRDFPDRLE 182
>pdb|1UWY|A Chain A, Crystal Structure Of Human Carboxypeptidase M
Length = 426
Score = 140 bits (353), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 72/147 (48%), Positives = 94/147 (63%), Gaps = 6/147 (4%)
Query: 46 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKY 105
Y+ ++AF+ ++Y + +IGKSV+GRNLW + + P + P FKY
Sbjct: 5 YHRQEGMEAFLKTVAQNYSSVTHLHSIGKSVKGRNLWVLVVGR---FPKEHRIGIPEFKY 61
Query: 106 VANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKC 165
VANMHGDETVG L++ LI YLV DGKD IT L+NST I+I+PS+NPDGF A K+ C
Sbjct: 62 VANMHGDETVGRELLLHLIDYLVTSDGKDPEITNLINSTRIHIMPSMNPDGFEAVKKPDC 121
Query: 166 DSLDGYVGRKNAHGVDLNRNFPDQFEY 192
+GR+N + DLNRNFPD FEY
Sbjct: 122 YYS---IGRENYNQYDLNRNFPDAFEY 145
>pdb|1QMU|A Chain A, Duck Carboxypeptidase D Domain Ii
pdb|1H8L|A Chain A, Duck Carboxypeptidase D Domain Ii In Complex With Gemsa
Length = 380
Score = 126 bits (317), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 95/146 (65%), Gaps = 6/146 (4%)
Query: 45 RYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFK 104
R+++ ++++ F+ + YP + R ++GKSV+ R L+ +EI+ D+P +P FK
Sbjct: 9 RHHHFSDMEIFLRRYANEYPSITRLYSVGKSVELRELYVMEIS---DNPGIHEAGEPEFK 65
Query: 105 YVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGK 164
Y+ NMHG+E VG L++ LI+YL G D +T L+ ST I+I+PS+NPDG+ ++EG
Sbjct: 66 YIGNMHGNEVVGRELLLNLIEYLCKNFGTDPEVTDLVQSTRIHIMPSMNPDGYEKSQEG- 124
Query: 165 CDSLDGYVGRKNAHGVDLNRNFPDQF 190
G VGR N++ DLNRNFPDQF
Sbjct: 125 --DRGGTVGRNNSNNYDLNRNFPDQF 148
>pdb|2NSM|A Chain A, Crystal Structure Of The Human Carboxypeptidase N
(kininase I) Catalytic Domain
Length = 439
Score = 108 bits (269), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/145 (39%), Positives = 87/145 (60%), Gaps = 4/145 (2%)
Query: 45 RYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFK 104
R++ +L + K P + R +IG+SV+GR+L+ +E + D P ++P K
Sbjct: 5 RHHRYDDLVRTLYKVQNECPGITRVYSIGRSVEGRHLYVLEFS---DHPGIHEPLEPEVK 61
Query: 105 YVANMHGDETVGYALMVFLIQYLVLK-DGKDDRITKLLNSTDIYIVPSINPDGFAAAKEG 163
YV NMHG+E +G LM+ L ++L + ++ RI +L+ T I+I+PS+NPDG+ A
Sbjct: 62 YVGNMHGNEALGRELMLQLSEFLCEEFRNRNQRIVQLIQDTRIHILPSMNPDGYEVAAAQ 121
Query: 164 KCDSLDGYVGRKNAHGVDLNRNFPD 188
+ VGR NA+GVDLNRNFPD
Sbjct: 122 GPNKPGYLVGRNNANGVDLNRNFPD 146
>pdb|1OBR|A Chain A, Carboxypeptidase T
pdb|3V7Z|A Chain A, Carboxypeptidase T With Gemsa
pdb|4DUK|A Chain A, Carboxypeptidase T With L-benzylsuccinic Acid
Length = 326
Score = 74.7 bits (182), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 75/151 (49%), Gaps = 20/151 (13%)
Query: 46 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKY 105
Y+N E+ I +YP++V+ +IGKS +GR LWAV+I+ +V G +P Y
Sbjct: 9 YHNYNEMVNKINTVASNYPNIVKKFSIGKSYEGRELWAVKISDNV----GTDENEPEVLY 64
Query: 106 VANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKC 165
A H E + + ++ + D RIT L+N+ +IYIV +INPDG G+
Sbjct: 65 TALHHAREHLTVEMALYTLDLFTQNYNLDSRITNLVNNREIYIVFNINPDG------GEY 118
Query: 166 DSLDGYV--GRKNAH--------GVDLNRNF 186
D G RKN G DLNRN+
Sbjct: 119 DISSGSYKSWRKNRQPNSGSSYVGTDLNRNY 149
>pdb|3QNV|A Chain A, Carboxypeptidase T
pdb|4DJL|A Chain A, Carboxypeptidase T With N-sulfamoyl-l-phenylalanine
Length = 323
Score = 74.7 bits (182), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 75/151 (49%), Gaps = 20/151 (13%)
Query: 46 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKY 105
Y+N E+ I +YP++V+ +IGKS +GR LWAV+I+ +V G +P Y
Sbjct: 9 YHNYNEMVNKINTVASNYPNIVKKFSIGKSYEGRELWAVKISDNV----GTDENEPEVLY 64
Query: 106 VANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKC 165
A H E + + ++ + D RIT L+N+ +IYIV +INPDG G+
Sbjct: 65 TALHHAREHLTVEMALYTLDLFTQNYNLDSRITNLVNNREIYIVFNINPDG------GEY 118
Query: 166 DSLDGYV--GRKNAH--------GVDLNRNF 186
D G RKN G DLNRN+
Sbjct: 119 DISSGSYKSWRKNRQPNSGSSYVGTDLNRNY 149
>pdb|3PRT|A Chain A, Mutant Of The Carboxypeptidase T
Length = 323
Score = 74.7 bits (182), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 75/151 (49%), Gaps = 20/151 (13%)
Query: 46 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKY 105
Y+N E+ I +YP++V+ +IGKS +GR LWAV+I+ +V G +P Y
Sbjct: 9 YHNYNEMVNKINTVASNYPNIVKKFSIGKSYEGRELWAVKISDNV----GTDENEPEVLY 64
Query: 106 VANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKC 165
A H E + + ++ + D RIT L+N+ +IYIV +INPDG G+
Sbjct: 65 TALHHAREHLTVEMALYTLDLFTQNYNLDSRITNLVNNREIYIVFNINPDG------GEY 118
Query: 166 DSLDGYV--GRKNAH--------GVDLNRNF 186
D G RKN G DLNRN+
Sbjct: 119 DISSGSYKSWRKNRQPNSGSSYVGTDLNRNY 149
>pdb|3V38|A Chain A, Carboxypeptidase T Mutant L254n
Length = 326
Score = 74.7 bits (182), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 75/151 (49%), Gaps = 20/151 (13%)
Query: 46 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKY 105
Y+N E+ I +YP++V+ +IGKS +GR LWAV+I+ +V G +P Y
Sbjct: 9 YHNYNEMVNKINTVASNYPNIVKKFSIGKSYEGRELWAVKISDNV----GTDENEPEVLY 64
Query: 106 VANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKC 165
A H E + + ++ + D RIT L+N+ +IYIV +INPDG G+
Sbjct: 65 TALHHAREHLTVEMALYTLDLFTQNYNLDSRITNLVNNREIYIVFNINPDG------GEY 118
Query: 166 DSLDGYV--GRKNAH--------GVDLNRNF 186
D G RKN G DLNRN+
Sbjct: 119 DISSGSYKSWRKNRQPNSGSSYVGTDLNRNY 149
>pdb|1JQG|A Chain A, Crystal Structure Of The Carboxypeptidase A From
Helicoverpa Armigera
Length = 433
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 12/150 (8%)
Query: 41 IDLQRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMK 100
+ + ++ E+DA++ + K +P++V GKS +GR++ + I+ + + + K
Sbjct: 116 LSFDKIHSYEEVDAYLQELAKEFPNVVTVVEGGKSFEGRSIKYLRIS----TTNFQDASK 171
Query: 101 PMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDG---- 156
P+ + +H E V ++ I LV+ + D L+N+ D I+P NPDG
Sbjct: 172 PVVMMQSLLHCREWVTLPATLYAIHKLVIDVTESD----LINNIDWIILPVANPDGYVHT 227
Query: 157 FAAAKEGKCDSLDGYVGRKNAHGVDLNRNF 186
F + + + GY+ GVDLNRNF
Sbjct: 228 FGGDRYWRKNRATGYMAGNLCMGVDLNRNF 257
>pdb|1AYE|A Chain A, Human Procarboxypeptidase A2
Length = 401
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 64/151 (42%), Gaps = 10/151 (6%)
Query: 38 SAGIDLQRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRT 97
S + Y+ E+ + V +P LV IG S + R + ++ + D
Sbjct: 97 SGNFNFGAYHTLEEISQEMDNLVAEHPGLVSKVNIGSSFENRPMNVLKFSTGGD------ 150
Query: 98 LMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDG- 156
KP A +H E V A ++ +V GKD IT +L++ DI+++P NPDG
Sbjct: 151 --KPAIWLDAGIHAREWVTQATALWTANKIVSDYGKDPSITSILDALDIFLLPVTNPDGY 208
Query: 157 -FAAAKEGKCDSLDGYVGRKNAHGVDLNRNF 186
F+ K V GVD NRN+
Sbjct: 209 VFSQTKNRMWRKTRSKVSGSLCVGVDPNRNW 239
>pdb|1Z5R|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
pdb|1Z5R|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
pdb|1Z5R|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
pdb|1ZG7|A Chain A, Crystal Structure Of 2-(5-{[amino(Imino)methyl]amino}-2-
Chlorophenyl)-3-Sulfanylpropanoic Acid Bound To
Activated Porcine Pancreatic Carboxypeptidase B
pdb|1ZG7|B Chain B, Crystal Structure Of 2-(5-{[amino(Imino)methyl]amino}-2-
Chlorophenyl)-3-Sulfanylpropanoic Acid Bound To
Activated Porcine Pancreatic Carboxypeptidase B
pdb|1ZG7|C Chain C, Crystal Structure Of 2-(5-{[amino(Imino)methyl]amino}-2-
Chlorophenyl)-3-Sulfanylpropanoic Acid Bound To
Activated Porcine Pancreatic Carboxypeptidase B
pdb|1ZG8|A Chain A, Crystal Structure Of (R)-2-(3-{[amino(Imino)
Methyl]amino}phenyl)-3-Sulfanylpropanoic Acid Bound To
Activated Porcine Pancreatic Carboxypeptidase B
pdb|1ZG8|B Chain B, Crystal Structure Of (R)-2-(3-{[amino(Imino)
Methyl]amino}phenyl)-3-Sulfanylpropanoic Acid Bound To
Activated Porcine Pancreatic Carboxypeptidase B
pdb|1ZG8|C Chain C, Crystal Structure Of (R)-2-(3-{[amino(Imino)
Methyl]amino}phenyl)-3-Sulfanylpropanoic Acid Bound To
Activated Porcine Pancreatic Carboxypeptidase B
pdb|1ZG9|A Chain A, Crystal Structure Of 5-{[amino(Imino)methyl]amino}-2-
(Sulfanylmethyl)pentanoic Acid Bound To Activated
Porcine Pancreatic Carboxypeptidase B
pdb|1ZG9|B Chain B, Crystal Structure Of 5-{[amino(Imino)methyl]amino}-2-
(Sulfanylmethyl)pentanoic Acid Bound To Activated
Porcine Pancreatic Carboxypeptidase B
pdb|1ZG9|C Chain C, Crystal Structure Of 5-{[amino(Imino)methyl]amino}-2-
(Sulfanylmethyl)pentanoic Acid Bound To Activated
Porcine Pancreatic Carboxypeptidase B
pdb|2JEW|A Chain A, Crystal Structure Of ( (2s)-5-Amino-2-((1-N-Propyl-1h-
Imidazol-4-Yl)methyl)pentanoic Acid) Uk396,082 A Tafia
Inhibitor, Bound To Activated Porcine Pancreatic
Carboxypeptidaseb
pdb|2PIY|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
(S)-2-(3-Aminomethyl-Phenyl)-3-{hydroxy-
[(R)-2-Methyl-1-(3-Phenyl-Propane-1-Sulfonylamino)-
Propyl]- Phosphinoyl}-Propionic Acid {zk 528} Complex
pdb|2PIY|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
(S)-2-(3-Aminomethyl-Phenyl)-3-{hydroxy-
[(R)-2-Methyl-1-(3-Phenyl-Propane-1-Sulfonylamino)-
Propyl]- Phosphinoyl}-Propionic Acid {zk 528} Complex
pdb|2PIY|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
(S)-2-(3-Aminomethyl-Phenyl)-3-{hydroxy-
[(R)-2-Methyl-1-(3-Phenyl-Propane-1-Sulfonylamino)-
Propyl]- Phosphinoyl}-Propionic Acid {zk 528} Complex
pdb|2PIZ|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Guanidino-Phenyl)-3-[hydroxy-(3-
Phenyl-Propyl)-Phosphinoyl]-Propionic Acid Complex
pdb|2PIZ|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Guanidino-Phenyl)-3-[hydroxy-(3-
Phenyl-Propyl)-Phosphinoyl]-Propionic Acid Complex
pdb|2PIZ|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Guanidino-Phenyl)-3-[hydroxy-(3-
Phenyl-Propyl)-Phosphinoyl]-Propionic Acid Complex
pdb|2PJ0|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
[((R)-1-Benzyloxycarbonylamino-2-Methyl-
Propyl)-Hydroxy-Phosphinoyloxy]-(3-Guanidino-Phenyl)-
Acetic Acid Complex
pdb|2PJ0|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
[((R)-1-Benzyloxycarbonylamino-2-Methyl-
Propyl)-Hydroxy-Phosphinoyloxy]-(3-Guanidino-Phenyl)-
Acetic Acid Complex
pdb|2PJ0|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
[((R)-1-Benzyloxycarbonylamino-2-Methyl-
Propyl)-Hydroxy-Phosphinoyloxy]-(3-Guanidino-Phenyl)-
Acetic Acid Complex
pdb|2PJ1|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B (3-aminomethyl-phenyl)-[((r)-1-
Benzyloxycarbonylamino-2-methyl-propyl)-hydroxy-
Phosphinoyloxy]-acetic Acid Complex
pdb|2PJ1|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B (3-aminomethyl-phenyl)-[((r)-1-
Benzyloxycarbonylamino-2-methyl-propyl)-hydroxy-
Phosphinoyloxy]-acetic Acid Complex
pdb|2PJ1|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B (3-aminomethyl-phenyl)-[((r)-1-
Benzyloxycarbonylamino-2-methyl-propyl)-hydroxy-
Phosphinoyloxy]-acetic Acid Complex
pdb|2PJ2|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Aminomethyl-Phenyl)-3-[((R)-1-
Benzyloxycarbonylamino-2-Methyl-Propyl)-Hydroxy-
Phosphinoyl]-Propionic Acid Complex
pdb|2PJ2|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Aminomethyl-Phenyl)-3-[((R)-1-
Benzyloxycarbonylamino-2-Methyl-Propyl)-Hydroxy-
Phosphinoyl]-Propionic Acid Complex
pdb|2PJ2|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Aminomethyl-Phenyl)-3-[((R)-1-
Benzyloxycarbonylamino-2-Methyl-Propyl)-Hydroxy-
Phosphinoyl]-Propionic Acid Complex
pdb|2PJ3|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B (3-Guanidino-Phenyl)-{hydroxy-[(R)-2-
Methyl-1-(3-Phenyl-Propionylamino)-Propyl]-
Phosphinoyloxy}- Acetic Acid Complex
pdb|2PJ3|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B (3-Guanidino-Phenyl)-{hydroxy-[(R)-2-
Methyl-1-(3-Phenyl-Propionylamino)-Propyl]-
Phosphinoyloxy}- Acetic Acid Complex
pdb|2PJ3|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B (3-Guanidino-Phenyl)-{hydroxy-[(R)-2-
Methyl-1-(3-Phenyl-Propionylamino)-Propyl]-
Phosphinoyloxy}- Acetic Acid Complex
pdb|2PJ4|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
[((R)-Benzyloxycarbonylamino-Cyclohexyl-
Methyl)-Hydroxy-Phosphinoyloxy]-(3-Guanidino-Phenyl)-
Acetic Acid Complex
pdb|2PJ4|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
[((R)-Benzyloxycarbonylamino-Cyclohexyl-
Methyl)-Hydroxy-Phosphinoyloxy]-(3-Guanidino-Phenyl)-
Acetic Acid Complex
pdb|2PJ5|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
[((R)-1-Benzyloxycarbonylamino-Hexyl)-
Hydroxy-Phosphinoyloxy]-(3-Guanidino-Phenyl)-Acetic Acid
Complex
pdb|2PJ5|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
[((R)-1-Benzyloxycarbonylamino-Hexyl)-
Hydroxy-Phosphinoyloxy]-(3-Guanidino-Phenyl)-Acetic Acid
Complex
pdb|2PJ5|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
[((R)-1-Benzyloxycarbonylamino-Hexyl)-
Hydroxy-Phosphinoyloxy]-(3-Guanidino-Phenyl)-Acetic Acid
Complex
pdb|2PJ6|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Aminomethyl-Phenyl)-3-{hydroxy-
[(R)-2-Methyl-1-(2-Phenyl-Ethanesulfonylamino)-Propyl]-
Phosphinoyl}-Propionic Acid Complex
pdb|2PJ7|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Aminomethyl-Phenyl)-3-[((R)-1-
Benzenesulfonylamino-2-Methyl-Propyl)-Hydroxy-
Phosphinoyl]- Propionic Acid Complex
pdb|2PJ7|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Aminomethyl-Phenyl)-3-[((R)-1-
Benzenesulfonylamino-2-Methyl-Propyl)-Hydroxy-
Phosphinoyl]- Propionic Acid Complex
pdb|2PJ7|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Aminomethyl-Phenyl)-3-[((R)-1-
Benzenesulfonylamino-2-Methyl-Propyl)-Hydroxy-
Phosphinoyl]- Propionic Acid Complex
pdb|2PJ8|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Aminomethyl-Phenyl)-3-{[(R)-1-
(Biphenyl-4-Sulfonylamino)-2-Methyl-Propyl]-Hydroxy-
Phosphinoyl}-Propionic Acid Complex
pdb|2PJ8|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Aminomethyl-Phenyl)-3-{[(R)-1-
(Biphenyl-4-Sulfonylamino)-2-Methyl-Propyl]-Hydroxy-
Phosphinoyl}-Propionic Acid Complex
pdb|2PJ8|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Aminomethyl-Phenyl)-3-{[(R)-1-
(Biphenyl-4-Sulfonylamino)-2-Methyl-Propyl]-Hydroxy-
Phosphinoyl}-Propionic Acid Complex
pdb|2PJ9|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B 2-(3-Aminomethyl-Phenyl)-3-{[(R)-1-
(Benzo[1,2,
5]thiadiazole-4-Sulfonylamino)-2-Methyl-Propyl]-
Hydroxy-Phosphinoyl}-Propionic Acid Complex
pdb|2PJA|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
3-{[(R)-1-((S)-2-Benzyloxycarbonylamino-
3-Phenyl-Propionylamino)-2-Methyl-Propyl]-Hydroxy-
Phosphinoyl}-2-(3-Guanidino-Phenyl)-Propionic Acid
Complex
pdb|2PJA|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
3-{[(R)-1-((S)-2-Benzyloxycarbonylamino-
3-Phenyl-Propionylamino)-2-Methyl-Propyl]-Hydroxy-
Phosphinoyl}-2-(3-Guanidino-Phenyl)-Propionic Acid
Complex
pdb|2PJA|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
3-{[(R)-1-((S)-2-Benzyloxycarbonylamino-
3-Phenyl-Propionylamino)-2-Methyl-Propyl]-Hydroxy-
Phosphinoyl}-2-(3-Guanidino-Phenyl)-Propionic Acid
Complex
pdb|2PJB|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
2-(3-aminomethyl-phenyl)-3-{[1-((s)-2-
Benzyloxycarbonylamino-3-phenyl-propane-1-
sulfonylamino)-2-
Methyl-propyl]-hydroxy-phosphinoyl}-propionic Acid
Complex
pdb|2PJB|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
2-(3-aminomethyl-phenyl)-3-{[1-((s)-2-
Benzyloxycarbonylamino-3-phenyl-propane-1-
sulfonylamino)-2-
Methyl-propyl]-hydroxy-phosphinoyl}-propionic Acid
Complex
pdb|2PJB|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
2-(3-aminomethyl-phenyl)-3-{[1-((s)-2-
Benzyloxycarbonylamino-3-phenyl-propane-1-
sulfonylamino)-2-
Methyl-propyl]-hydroxy-phosphinoyl}-propionic Acid
Complex
pdb|2PJC|A Chain A, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
({(R)-1-[(S)-2-Benzyloxycarbonylamino-3-
(4-Hydroxy-Phenyl)-Propionylamino]-2-Methyl-Propyl}-
Hydroxy-Phosphinoyloxy)-(3-Guanidino-Phenyl)-Acetic Acid
Complex
pdb|2PJC|B Chain B, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
({(R)-1-[(S)-2-Benzyloxycarbonylamino-3-
(4-Hydroxy-Phenyl)-Propionylamino]-2-Methyl-Propyl}-
Hydroxy-Phosphinoyloxy)-(3-Guanidino-Phenyl)-Acetic Acid
Complex
pdb|2PJC|C Chain C, Crystal Structure Of Activated Porcine Pancreatic
Carboxypeptidase B
({(R)-1-[(S)-2-Benzyloxycarbonylamino-3-
(4-Hydroxy-Phenyl)-Propionylamino]-2-Methyl-Propyl}-
Hydroxy-Phosphinoyloxy)-(3-Guanidino-Phenyl)-Acetic Acid
Complex
Length = 306
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 62/151 (41%), Gaps = 9/151 (5%)
Query: 38 SAGIDLQRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRT 97
+ G ++Y N ++A+ + P L+ IG + G N++ +++ P+
Sbjct: 1 TTGHSYEKYNNWETIEAWTKQVTSENPDLISRTAIGTTFLGNNIYLLKVGKP--GPN--- 55
Query: 98 LMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDG- 156
KP H E + +A + ++ VL G + +T+ LN D Y++P +N DG
Sbjct: 56 --KPAIFMDCGFHAREWISHAFCQWFVREAVLTYGYESHMTEFLNKLDFYVLPVLNIDGY 113
Query: 157 -FAAAKEGKCDSLDGYVGRKNAHGVDLNRNF 186
+ K G D NRNF
Sbjct: 114 IYTWTKNRMWRKTRSTNAGTTCIGTDPNRNF 144
>pdb|3GLJ|A Chain A, A Polymorph Of Carboxypeptidase B Zymogen Structure
Length = 401
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 62/151 (41%), Gaps = 9/151 (5%)
Query: 38 SAGIDLQRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRT 97
+ G ++Y N ++A+ + P L+ IG + G N++ +++ P+
Sbjct: 96 TTGHSYEKYNNWETIEAWTKQVTSENPDLISRTAIGTTFLGNNIYLLKVGKP--GPN--- 150
Query: 98 LMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDG- 156
KP H E + +A + ++ VL G + +T+ LN D Y++P +N DG
Sbjct: 151 --KPAIFMDCGFHAREWISHAFCQWFVREAVLTYGYESHMTEFLNKLDFYVLPVLNIDGY 208
Query: 157 -FAAAKEGKCDSLDGYVGRKNAHGVDLNRNF 186
+ K G D NRNF
Sbjct: 209 IYTWTKNRMWRKTRSTNAGTTCIGTDPNRNF 239
>pdb|1ZLI|A Chain A, Crystal Structure Of The Tick Carboxypeptidase Inhibitor
In Complex With Human Carboxypeptidase B
Length = 309
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 64/151 (42%), Gaps = 9/151 (5%)
Query: 38 SAGIDLQRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRT 97
+ G ++Y N ++A+ + P L+ IG + +GR ++ +++ +
Sbjct: 3 ATGHSYEKYNNWETIEAWTQQVATENPALISRSVIGTTFEGRAIYLLKVGKAGQN----- 57
Query: 98 LMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDG- 156
KP H E + A + ++ V G++ ++T+LLN D Y++P +N DG
Sbjct: 58 --KPAIFMDCGFHAREWISPAFCQWFVREAVRTYGREIQVTELLNKLDFYVLPVLNIDGY 115
Query: 157 -FAAAKEGKCDSLDGYVGRKNAHGVDLNRNF 186
+ K + G D NRNF
Sbjct: 116 IYTWTKSRFWRKTRSTHTGSSCIGTDPNRNF 146
>pdb|1DTD|A Chain A, Crystal Structure Of The Complex Between The Leech
Carboxypeptidase Inhibitor And The Human
Carboxypeptidase A2 (Lci-Cpa2)
Length = 303
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 64/148 (43%), Gaps = 11/148 (7%)
Query: 46 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKY 105
Y+ E+ + V +P LV IG S + R + ++ + D KP
Sbjct: 6 YHTLEEISQEMDNLVAEHPGLVSKVNIGSSFENRPMNVLKFSTGGD--------KPAIWL 57
Query: 106 VANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDG--FAAAKEG 163
A +H E V A ++ +V GKD IT +L++ DI+++P NPDG F+ K
Sbjct: 58 DAGIHAREWVTQATALWTANKIVSDYGKDPSITSILDALDIFLLPVTNPDGYVFSQTKNR 117
Query: 164 KCDSLDGYVGRKN-AHGVDLNRNFPDQF 190
V + GVD NRN+ F
Sbjct: 118 MWRKTRSKVSAGSLCVGVDPNRNWDAGF 145
>pdb|3D4U|A Chain A, Bovine Thrombin-Activatable Fibrinolysis Inhibitor (Tafia)
In Complex With Tick-Derived Carboxypeptidase Inhibitor
Length = 309
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 67/148 (45%), Gaps = 8/148 (5%)
Query: 44 QRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMF 103
++Y++ E+ ++I + YP +V IG S + L+ ++++ +
Sbjct: 7 EQYHSLNEIYSWIEVMTERYPDMVEKIHIGSSYEKYPLYVLKVSKKEQRAKNAMWID--- 63
Query: 104 KYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGF-AAAKE 162
+H E + A ++ + + GK+ T LL D YI+P +N DG+ K+
Sbjct: 64 ---CGIHAREWISPAFCLWFVGSVTYYYGKEKMHTNLLKHMDFYIMPVVNVDGYDYTWKK 120
Query: 163 GKCDSLDGYVGRKNAH-GVDLNRNFPDQ 189
+ + + KNA G DLNRNF +
Sbjct: 121 DRMWRKNRSLHEKNACVGTDLNRNFASK 148
>pdb|3DGV|A Chain A, Crystal Structure Of Thrombin Activatable Fibrinolysis
Inhibitor (Tafi)
pdb|3DGV|B Chain B, Crystal Structure Of Thrombin Activatable Fibrinolysis
Inhibitor (Tafi)
pdb|3DGV|C Chain C, Crystal Structure Of Thrombin Activatable Fibrinolysis
Inhibitor (Tafi)
pdb|3OSL|A Chain A, Structure Of Bovine Thrombin-Activatable Fibrinolysis
Inhibitor In Complex With Tick Carboxypeptidase
Inhibitor
pdb|3OSL|C Chain C, Structure Of Bovine Thrombin-Activatable Fibrinolysis
Inhibitor In Complex With Tick Carboxypeptidase
Inhibitor
Length = 401
Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 67/148 (45%), Gaps = 8/148 (5%)
Query: 44 QRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMF 103
++Y++ E+ ++I + YP +V IG S + L+ ++++ +
Sbjct: 99 EQYHSLNEIYSWIEVMTERYPDMVEKIHIGSSYEKYPLYVLKVSKKEQRAKNAMWID--- 155
Query: 104 KYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGF-AAAKE 162
+H E + A ++ + + GK+ T LL D YI+P +N DG+ K+
Sbjct: 156 ---CGIHAREWISPAFCLWFVGSVTYYYGKEKMHTNLLKHMDFYIMPVVNVDGYDYTWKK 212
Query: 163 GKCDSLDGYVGRKNAH-GVDLNRNFPDQ 189
+ + + KNA G DLNRNF +
Sbjct: 213 DRMWRKNRSLHEKNACVGTDLNRNFASK 240
>pdb|2BOA|A Chain A, Human Procarboxypeptidase A4.
pdb|2BOA|B Chain B, Human Procarboxypeptidase A4
Length = 404
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 72/169 (42%), Gaps = 20/169 (11%)
Query: 3 LIVPSLSLLLCHVTL-STAADYYFDFDDLTGL-------------EDADSAGIDLQRYYN 48
++VPS+SL L S +Y +DL L ++ S + Y++
Sbjct: 49 VLVPSVSLQAFKSFLRSQGLEYAVTIEDLQALLDNEDDEMQHNEGQERSSNNFNYGAYHS 108
Query: 49 STELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVAN 108
+ + +P L R IG S + R ++ ++ + G+ + +P A
Sbjct: 109 LEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFS------TGKGVRRPAVWLNAG 162
Query: 109 MHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGF 157
+H E + A ++ + +V +D IT +L DI+++P NPDG+
Sbjct: 163 IHSREWISQATAIWTARKIVSDYQRDPAITSILEKMDIFLLPVANPDGY 211
>pdb|4A37|A Chain A, Metallo-Carboxypeptidase From Pseudomonas Aeruginosa
pdb|4A37|B Chain B, Metallo-Carboxypeptidase From Pseudomonas Aeruginosa
pdb|4A38|A Chain A, Metallo-Carboxypeptidase From Pseudomonas Aureginosa In
Complex With L-Benzylsuccinic Acid
pdb|4A38|B Chain B, Metallo-Carboxypeptidase From Pseudomonas Aureginosa In
Complex With L-Benzylsuccinic Acid
pdb|4A39|A Chain A, Metallo-Carboxypeptidase From Pseudomonas Aeruginosa In
Complex With (2-Guanidinoethylmercapto)succinic Acid
pdb|4A39|B Chain B, Metallo-Carboxypeptidase From Pseudomonas Aeruginosa In
Complex With (2-Guanidinoethylmercapto)succinic Acid
Length = 388
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 54/116 (46%), Gaps = 20/116 (17%)
Query: 71 TIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFLIQYLVLK 130
+G SVQGR+ +E+ PD + +A H E + M LI+ L
Sbjct: 148 AVGTSVQGRD---IELLRVRRHPDSHLKLW----VIAQQHPGEHMAEWFMEGLIERLQRP 200
Query: 131 DGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAHGVDLNRNF 186
D D + +LL D+Y+VP++NPDG + G + R NA G DLNR +
Sbjct: 201 D--DTEMQRLLEKADLYLVPNMNPDG----------AFHGNL-RTNAAGQDLNRAW 243
>pdb|4A94|A Chain A, Structure Of The Carboxypeptidase Inhibitor From Nerita
Versicolor In Complex With Human Cpa4
pdb|4A94|B Chain B, Structure Of The Carboxypeptidase Inhibitor From Nerita
Versicolor In Complex With Human Cpa4
Length = 310
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 63 YPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVF 122
+P L R IG S + R ++ ++ + G+ + +P A +H E + A ++
Sbjct: 29 FPDLARRVKIGHSFENRPMYVLKFS------TGKGVRRPAVWLNAGIHSREWISQATAIW 82
Query: 123 LIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGF 157
+ +V +D IT +L DI+++P NPDG+
Sbjct: 83 TARKIVSDYQRDPAITSILEKMDIFLLPVANPDGY 117
>pdb|2PCU|A Chain A, Human Carboxypeptidase A4 In Complex With A Cleaved
Hexapeptide
Length = 305
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 63 YPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVF 122
+P L R IG S + R ++ ++ + G+ + +P A +H E + A ++
Sbjct: 25 FPDLARRVKIGHSFENRPMYVLKFS------TGKGVRRPAVWLNAGIHSREWISQATAIW 78
Query: 123 LIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGF 157
+ +V +D IT +L DI+++P NPDG+
Sbjct: 79 TARKIVSDYQRDPAITSILEKMDIFLLPVANPDGY 113
>pdb|2BO9|A Chain A, Human Carboxypeptidase A4 In Complex With Human Latexin.
pdb|2BO9|C Chain C, Human Carboxypeptidase A4 In Complex With Human Latexin
Length = 308
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 63 YPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVF 122
+P L R IG S + R ++ ++ + G+ + +P A +H E + A ++
Sbjct: 27 FPDLARRVKIGHSFENRPMYVLKFS------TGKGVRRPAVWLNAGIHSREWISQATAIW 80
Query: 123 LIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGF 157
+ +V +D IT +L DI+++P NPDG+
Sbjct: 81 TARKIVSDYQRDPAITSILEKMDIFLLPVANPDGY 115
>pdb|1KWM|A Chain A, Human Procarboxypeptidase B: Three-Dimensional Structure
And Implications For Thrombin-Activatable Fibrinolysis
Inhibitor (Tafi)
pdb|1KWM|B Chain B, Human Procarboxypeptidase B: Three-Dimensional Structure
And Implications For Thrombin-Activatable Fibrinolysis
Inhibitor (Tafi)
Length = 402
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 63/151 (41%), Gaps = 9/151 (5%)
Query: 38 SAGIDLQRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRT 97
+ G ++Y ++A+ + P L+ IG + +GR ++ +++ +
Sbjct: 96 ATGHSYEKYNKWETIEAWTQQVATENPALISRSVIGTTFEGRAIYLLKVGKAGQN----- 150
Query: 98 LMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDG- 156
KP H E + A + ++ V G++ ++T+LLN D Y++P +N DG
Sbjct: 151 --KPAIFMDCGFHAREWISPAFCQWFVREAVRTYGREIQVTELLNKLDFYVLPVLNIDGY 208
Query: 157 -FAAAKEGKCDSLDGYVGRKNAHGVDLNRNF 186
+ K + G D NRNF
Sbjct: 209 IYTWTKSRFWRKTRSTHTGSSCIGTDPNRNF 239
>pdb|1NSA|A Chain A, Three-Dimensional Structure Of Porcine Procarboxypeptidase
B: A Structural Basis Of Its Inactivity
Length = 395
Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 61/151 (40%), Gaps = 9/151 (5%)
Query: 38 SAGIDLQRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRT 97
+ G ++Y N ++A+ + P L+ IG + G N++ ++ V P
Sbjct: 90 TTGHSYEKYNNWETIEAWTEQVTSKNPDLISRSAIGTTFDGDNIYLLK----VGKPGSN- 144
Query: 98 LMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDG- 156
KP H E + A + ++ V G + +T+ L++ D Y++P +N DG
Sbjct: 145 --KPAIFMDCGFHAREWISQAFCQWFVRDAVRTYGYEAHMTEFLDNLDFYVLPVLNIDGY 202
Query: 157 -FAAAKEGKCDSLDGYVGRKNAHGVDLNRNF 186
+ K + G D NRNF
Sbjct: 203 IYTWTKNRMWRKTRSTNAGSSCTGTDPNRNF 233
>pdb|1HDQ|A Chain A, Crystal Structure Of Bovine Pancreatic Carboxypeptidase A
Complexed With D-N-Hydroxyaminocarbonyl Phenylalanine At
2.3 A
pdb|2CTB|A Chain A, The High Resolution Crystal Structure Of The Complex
Between Carboxypeptidase A And L-Phenyl Lactate
pdb|2CTC|A Chain A, The High Resolution Crystal Structure Of The Complex
Between Carboxypeptidase A And L-Phenyl Lactate
Length = 307
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 62/147 (42%), Gaps = 9/147 (6%)
Query: 46 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKY 105
Y+ E+ F+ V +P LV IG+S +GR ++ ++ S G +P
Sbjct: 12 YHTLDEIYDFMDLLVAEHPQLVSKLQIGRSYEGRPIYVLKF-----STGGSN--RPAIWI 64
Query: 106 VANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFA--AAKEG 163
+H E + A V+ + G+D T +L+S DI++ NPDGFA ++
Sbjct: 65 DLGIHSREWITQATGVWFAKKFTEDYGQDPSFTAILDSMDIFLEIVTNPDGFAFTHSQNR 124
Query: 164 KCDSLDGYVGRKNAHGVDLNRNFPDQF 190
GVD NRN+ F
Sbjct: 125 LWRKTRSVTSSSLCVGVDANRNWDAGF 151
>pdb|1PYT|B Chain B, Ternary Complex Of Procarboxypeptidase A, Proproteinase E,
And Chymotrypsinogen C
pdb|3KGQ|A Chain A, Carboxypeptidase A Liganded To An Organic Small-Molecule:
Conformational Changes
Length = 309
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 62/147 (42%), Gaps = 9/147 (6%)
Query: 46 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKY 105
Y+ E+ F+ V +P LV IG+S +GR ++ ++ S G +P
Sbjct: 12 YHTLDEIYDFMDLLVAEHPQLVSKLQIGRSYEGRPIYVLKF-----STGGSN--RPAIWI 64
Query: 106 VANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFA--AAKEG 163
+H E + A V+ + G+D T +L+S DI++ NPDGFA ++
Sbjct: 65 DLGIHSREWITQATGVWFAKKFTEDYGQDPSFTAILDSMDIFLEIVTNPDGFAFTHSQNR 124
Query: 164 KCDSLDGYVGRKNAHGVDLNRNFPDQF 190
GVD NRN+ F
Sbjct: 125 LWRKTRSVTSSSLCVGVDANRNWDAGF 151
>pdb|3FX6|A Chain A, X-Ray Crystallographic Studies On The Complex Of
Carboxypeptidase A With The Inhibitor Using Alpha-Nitro
Ketone As The Zinc-Binding Group
pdb|3FX6|C Chain C, X-Ray Crystallographic Studies On The Complex Of
Carboxypeptidase A With The Inhibitor Using Alpha-Nitro
Ketone As The Zinc-Binding Group
pdb|3FX6|E Chain E, X-Ray Crystallographic Studies On The Complex Of
Carboxypeptidase A With The Inhibitor Using Alpha-Nitro
Ketone As The Zinc-Binding Group
pdb|3FVL|A Chain A, Crystallogic Studies On The Complex Of Carboxypeptidase A
With Inhibitors Using Alpha-Hydroxy Ketone As
Zinc-Binding Group
pdb|3FVL|C Chain C, Crystallogic Studies On The Complex Of Carboxypeptidase A
With Inhibitors Using Alpha-Hydroxy Ketone As
Zinc-Binding Group
pdb|3FVL|E Chain E, Crystallogic Studies On The Complex Of Carboxypeptidase A
With Inhibitors Using Alpha-Hydroxy Ketone As
Zinc-Binding Group
Length = 307
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 62/147 (42%), Gaps = 9/147 (6%)
Query: 46 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKY 105
Y+ E+ F+ V +P LV IG+S +GR ++ ++ S G +P
Sbjct: 12 YHTLDEIYDFMDLLVAEHPQLVSKLQIGRSYEGRPIYVLKF-----STGGSN--RPAIWI 64
Query: 106 VANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFA--AAKEG 163
+H E + A V+ + G+D T +L+S DI++ NPDGFA ++
Sbjct: 65 DLGIHSREWITQATGVWFAKKFTEDYGQDPSFTAILDSMDIFLEIVTNPDGFAFTHSQNR 124
Query: 164 KCDSLDGYVGRKNAHGVDLNRNFPDQF 190
GVD NRN+ F
Sbjct: 125 LWRKTRSVTSSSLCVGVDANRNWDAGF 151
>pdb|1EE3|P Chain P, Cadmium-Substituted Bovine Pancreatic Carboxypeptidase A
(Alfa-Form) At Ph 7.5 And 2 Mm Chloride In Monoclinic
Crystal Form
pdb|1ELL|P Chain P, Cadmium-Substituted Bovine Pancreatic Carboxypeptidase A
(Alfa-Form) At Ph 7.5 And 0.25 M Chloride In Monoclinic
Crystal Form.
pdb|1ELM|P Chain P, Cadmium-Substituted Bovine Pacreatic Carboxypeptidase A
(Alfa-Form) At Ph 5.5 And 2 Mm Chloride In Monoclinic
Crystal Form.
pdb|1ZLH|A Chain A, Crystal Structure Of The Tick Carboxypeptidase Inhibitor
In Complex With Bovine Carboxypeptidase A
pdb|2ABZ|A Chain A, Crystal Structure Of C19aC43A MUTANT OF LEECH
Carboxypeptidase Inhibitor In Complex With Bovine
Carboxypeptidase A
pdb|2ABZ|B Chain B, Crystal Structure Of C19aC43A MUTANT OF LEECH
Carboxypeptidase Inhibitor In Complex With Bovine
Carboxypeptidase A
pdb|1ARM|A Chain A, Carboxypeptidase A With Zn Replaced By Hg
pdb|1YME|A Chain A, Structure Of Carboxypeptidase
pdb|3I1U|A Chain A, Carboxypeptidase A Inhibited By A Thiirane Mechanism-Based
Inactivator
pdb|3HLP|A Chain A, Carboxypeptidase A Liganded To An Organic Small-Molecule:
Conformational Changes
pdb|3HLP|B Chain B, Carboxypeptidase A Liganded To An Organic Small-Molecule:
Conformational Changes
pdb|3HUV|A Chain A, Carboxypeptidase A Liganded To An Organic Small-Molecule:
Conformational Changes
Length = 309
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 62/147 (42%), Gaps = 9/147 (6%)
Query: 46 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKY 105
Y+ E+ F+ V +P LV IG+S +GR ++ ++ S G +P
Sbjct: 12 YHTLDEIYDFMDLLVAEHPQLVSKLQIGRSYEGRPIYVLKF-----STGGSN--RPAIWI 64
Query: 106 VANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFA--AAKEG 163
+H E + A V+ + G+D T +L+S DI++ NPDGFA ++
Sbjct: 65 DLGIHSREWITQATGVWFAKKFTEDYGQDPSFTAILDSMDIFLEIVTNPDGFAFTHSQNR 124
Query: 164 KCDSLDGYVGRKNAHGVDLNRNFPDQF 190
GVD NRN+ F
Sbjct: 125 LWRKTRSVTSSSLCVGVDANRNWDAGF 151
>pdb|1CPX|A Chain A, Beta Form Of Carboxypeptidase A (Residues 3-307) From
Bovine Pancreas In An Orthorhombic Crystal Form With Two
Zinc Ions In The Active Site.
pdb|1F57|A Chain A, Carboxypeptidase A Complex With D-Cysteine At 1.75 A
pdb|1M4L|A Chain A, Structure Of Native Carboxypeptidase A At 1.25 Resolution
pdb|1ARL|A Chain A, Carboxypeptidase A With Zn Removed
pdb|2RFH|A Chain A, Crystal Structure Analysis Of
Cpa-2-Benzyl-3-Nitropropanoic Acid Complex
Length = 307
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 62/147 (42%), Gaps = 9/147 (6%)
Query: 46 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKY 105
Y+ E+ F+ V +P LV IG+S +GR ++ ++ S G +P
Sbjct: 12 YHTLDEIYDFMDLLVAEHPQLVSKLQIGRSYEGRPIYVLKF-----STGGSN--RPAIWI 64
Query: 106 VANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFA--AAKEG 163
+H E + A V+ + G+D T +L+S DI++ NPDGFA ++
Sbjct: 65 DLGIHSREWITQATGVWFAKKFTEDYGQDPSFTAILDSMDIFLEIVTNPDGFAFTHSQNR 124
Query: 164 KCDSLDGYVGRKNAHGVDLNRNFPDQF 190
GVD NRN+ F
Sbjct: 125 LWRKTRSVTSSSLCVGVDANRNWDAGF 151
>pdb|3FJU|A Chain A, Ascaris Suum Carboxypeptidase Inhibitor In Complex With
Human Carboxypeptidase A1
Length = 307
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 65/152 (42%), Gaps = 19/152 (12%)
Query: 46 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKY 105
Y+ E+ F+ V PHLV IG + +GR ++ ++ S G +P
Sbjct: 11 YHTLEEIYDFLDLLVAENPHLVSKIQIGNTYEGRPIYVLKF-----STGGS--KRPAIWI 63
Query: 106 VANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKC 165
+H E V A V+ + + G+D T +L++ DI++ NPDGFA
Sbjct: 64 DTGIHSREWVTQASGVWFAKKITQDYGQDAAFTAILDTLDIFLEIVTNPDGFAFTH---- 119
Query: 166 DSLDGYVGRKNAH-------GVDLNRNFPDQF 190
S + + +H GVD NRN+ F
Sbjct: 120 -STNRMWRKTRSHTAGSLCIGVDPNRNWDAGF 150
>pdb|2V77|A Chain A, Crystal Structure Of Human Carboxypeptidase A1
pdb|2V77|B Chain B, Crystal Structure Of Human Carboxypeptidase A1
Length = 309
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 65/152 (42%), Gaps = 19/152 (12%)
Query: 46 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKY 105
Y+ E+ F+ V PHLV IG + +GR ++ ++ S G +P
Sbjct: 12 YHTLEEIYDFLDLLVAENPHLVSKIQIGNTYEGRPIYVLKF-----STGGS--KRPAIWI 64
Query: 106 VANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKC 165
+H E V A V+ + + G+D T +L++ DI++ NPDGFA
Sbjct: 65 DTGIHSREWVTQASGVWFAKKITQDYGQDAAFTAILDTLDIFLEIVTNPDGFAFTH---- 120
Query: 166 DSLDGYVGRKNAH-------GVDLNRNFPDQF 190
S + + +H GVD NRN+ F
Sbjct: 121 -STNRMWRKTRSHTAGSLCIGVDPNRNWDAGF 151
>pdb|1PCA|A Chain A, Three Dimensional Structure Of Porcine Pancreatic
Procarboxypeptidase A. A Comparison Of The A And B
Zymogens And Their Determinants For Inhibition And
Activation
Length = 403
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 65/153 (42%), Gaps = 21/153 (13%)
Query: 46 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKY 105
Y+ E+ F+ V +P LV IG+S +GR ++ ++ + + +P
Sbjct: 107 YHTLEEIYDFMDILVAEHPALVSKLQIGRSYEGRPIYVLKFSTGGSN-------RPAIWI 159
Query: 106 VANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKC 165
+ +H E + A V+ + + G++ T +L+S DI++ NP+GFA
Sbjct: 160 DSGIHSREWITQASGVWFAKKITENYGQNSSFTAILDSMDIFLEIVTNPNGFAFTHS--- 216
Query: 166 DSLDGYVGRKNAH--------GVDLNRNFPDQF 190
D + RK G D NRN+ F
Sbjct: 217 ---DNRLWRKTRSKASGSLCVGSDSNRNWDAGF 246
>pdb|3LMS|A Chain A, Structure Of Human Activated Thrombin-Activatable
Fibrinolys Inhibitor, Tafia, In Complex With
Tick-Derived Funnelin Inh Tci
Length = 309
Score = 43.5 bits (101), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/148 (20%), Positives = 64/148 (43%), Gaps = 8/148 (5%)
Query: 44 QRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMF 103
++Y++ E+ ++I + +P ++ IG S + L+ ++++ + +
Sbjct: 7 EQYHSLNEIYSWIEFITERHPDMLTKIHIGSSFEKYPLYVLKVSGKEQAAKNAIWID--- 63
Query: 104 KYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDG--FAAAK 161
+H E + A ++ I ++ G + T LL D Y++P +N DG ++ K
Sbjct: 64 ---CGIHAREWISPAFCLWFIGHITQFYGIIGQYTNLLRLVDFYVMPVVNVDGYDYSWKK 120
Query: 162 EGKCDSLDGYVGRKNAHGVDLNRNFPDQ 189
+ + G DLNRNF +
Sbjct: 121 NRMWRKNRSFYANNHCIGTDLNRNFASK 148
>pdb|1CBX|A Chain A, Crystal Structure Of The Complex Between Carboxypeptidase
A And The Biproduct Analog Inhibitor L-Benzylsuccinate
At 2.0 Angstroms Resolution
pdb|1CPS|A Chain A, Structural Comparison Of Sulfodiimine And Sulfonamide
Inhibitors In Their Complexes With Zinc Enzymes
Length = 307
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 21/153 (13%)
Query: 46 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKY 105
Y+ E+ F+ V +P LV IG+S +GR ++ ++ S G +P
Sbjct: 12 YHTLDEIYDFMDLLVAEHPQLVSKLQIGRSYEGRPIYVLKF-----STGGSN--RPAIWI 64
Query: 106 VANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKC 165
+H E + A V+ + G++ T +L+S DI++ NP+GFA
Sbjct: 65 DLGIHSREWITQATGVWFAKKFTENYGQNPSFTAILDSMDIFLEIVTNPNGFAFTHS--- 121
Query: 166 DSLDGYVGRKNAH--------GVDLNRNFPDQF 190
+ + RK GVD NRN+ F
Sbjct: 122 ---ENRLWRKTRSVTSSSLCVGVDANRNWDAGF 151
>pdb|1BAV|A Chain A, Carboxypeptidase A Complexed With
2-Benzyl-3-Iodo-Propanoic Acid (Bip)
pdb|1BAV|B Chain B, Carboxypeptidase A Complexed With
2-Benzyl-3-Iodo-Propanoic Acid (Bip)
pdb|1BAV|C Chain C, Carboxypeptidase A Complexed With
2-Benzyl-3-Iodo-Propanoic Acid (Bip)
pdb|1BAV|D Chain D, Carboxypeptidase A Complexed With
2-Benzyl-3-Iodo-Propanoic Acid (Bip)
Length = 309
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 21/153 (13%)
Query: 46 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKY 105
Y+ E+ F+ V +P LV IG+S +GR ++ ++ S G +P
Sbjct: 12 YHTLDEIYDFMDLLVAQHPELVSKLQIGRSYEGRPIYVLKF-----STGGSN--RPAIWI 64
Query: 106 VANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKC 165
+H E + A V+ + G++ T +L+S DI++ NP+GFA
Sbjct: 65 DLGIHSREWITQATGVWFAKKFTENYGQNPSFTAILDSMDIFLEIVTNPNGFAFTHS--- 121
Query: 166 DSLDGYVGRKNAH--------GVDLNRNFPDQF 190
+ + RK GVD NRN+ F
Sbjct: 122 ---ENRLWRKTRSVTSSSLCVGVDANRNWDAGF 151
>pdb|3L2N|A Chain A, Crystal Structure Of Putative Carboxypeptidase A
(yp_562911.1) From Shewanella Denitrificans Os-217 At
2.39 A Resolution
pdb|3L2N|B Chain B, Crystal Structure Of Putative Carboxypeptidase A
(yp_562911.1) From Shewanella Denitrificans Os-217 At
2.39 A Resolution
Length = 395
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 21/131 (16%)
Query: 56 ILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETV 115
++ V+ +P LV E +G ++ GR+ V++ D P +++ A H ET
Sbjct: 139 LISAVQLHP-LVSTEHLGLTLDGRDXTLVKVGDD--DPSKKSIW-----ITARQHPGETX 190
Query: 116 GYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRK 175
L+ L+ L+ D + LL+ + YIVP+ NPDG S+ G++ R
Sbjct: 191 AEWLVEGLLNQLLDNDCPTSK--ALLDKANFYIVPNXNPDG----------SVRGHL-RT 237
Query: 176 NAHGVDLNRNF 186
NA G +LNR +
Sbjct: 238 NAVGANLNREW 248
>pdb|3D66|A Chain A, Crystal Structure Of Thrombin-Activatable Fibrinolysis
Inhibitor (Tafi)
pdb|3D66|B Chain B, Crystal Structure Of Thrombin-Activatable Fibrinolysis
Inhibitor (Tafi)
pdb|3D66|C Chain C, Crystal Structure Of Thrombin-Activatable Fibrinolysis
Inhibitor (Tafi)
pdb|3D67|A Chain A, Crystal Structure Of Thrombin-Activatable Fibrinolysis
Inhibitor (Tafi) In Complex With
2-Guanidino-Ethyl-Mercaptosuccinic Acid (Gemsa)
pdb|3D67|B Chain B, Crystal Structure Of Thrombin-Activatable Fibrinolysis
Inhibitor (Tafi) In Complex With
2-Guanidino-Ethyl-Mercaptosuccinic Acid (Gemsa)
pdb|3D67|C Chain C, Crystal Structure Of Thrombin-Activatable Fibrinolysis
Inhibitor (Tafi) In Complex With
2-Guanidino-Ethyl-Mercaptosuccinic Acid (Gemsa)
Length = 424
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/148 (20%), Positives = 64/148 (43%), Gaps = 8/148 (5%)
Query: 44 QRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMF 103
++Y++ E+ ++I + +P ++ IG S + L+ ++++ + +
Sbjct: 122 EQYHSLNEIYSWIEFITERHPDMLTKIHIGSSFEKYPLYVLKVSGKEQTAKNAIWID--- 178
Query: 104 KYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDG--FAAAK 161
+H E + A ++ I ++ G + T LL D Y++P +N DG ++ K
Sbjct: 179 ---CGIHAREWISPAFCLWFIGHITQFYGIIGQYTNLLRLVDFYVMPVVNVDGYDYSWKK 235
Query: 162 EGKCDSLDGYVGRKNAHGVDLNRNFPDQ 189
+ + G DLNRNF +
Sbjct: 236 NRMWRKNRSFYANNHCIGTDLNRNFASK 263
>pdb|3K2K|A Chain A, Crystal Structure Of Putative Carboxypeptidase
(Yp_103406.1) From Burkholderia Mallei Atcc 23344 At
2.49 A Resolution
Length = 403
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 18/140 (12%)
Query: 49 STELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVAN 108
S E + L V+ P E +G++V+GR V + +PD K +A
Sbjct: 134 SEERHSEFLGAVQQXPQASVVE-LGRTVEGRPXSLVVLG----TPDEAGAAKKKVWIIAR 188
Query: 109 MHGDETVGYALMVFLIQYLV-LKDGKDDRIT-KLLNSTDIYIVPSINPDGFAAAKEGKCD 166
H E+ + L++ LV D D + KL + YIVP+ NPDG
Sbjct: 189 QHPGESXAEWFIEGLVKRLVGWGDWSGDPVARKLYDHATFYIVPNXNPDG---------- 238
Query: 167 SLDGYVGRKNAHGVDLNRNF 186
S+ G + R NA G +LNR +
Sbjct: 239 SVHGNL-RTNAAGANLNREW 257
>pdb|3D68|A Chain A, Crystal Structure Of A T325i/t329i/h333y/h335q Mutant Of
Thrombin- Activatable Fibrinolysis Inhibitor (tafi-iiyq)
pdb|3D68|B Chain B, Crystal Structure Of A T325i/t329i/h333y/h335q Mutant Of
Thrombin- Activatable Fibrinolysis Inhibitor (tafi-iiyq)
pdb|3D68|C Chain C, Crystal Structure Of A T325i/t329i/h333y/h335q Mutant Of
Thrombin- Activatable Fibrinolysis Inhibitor (tafi-iiyq)
Length = 424
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/148 (20%), Positives = 64/148 (43%), Gaps = 8/148 (5%)
Query: 44 QRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMF 103
++Y++ E+ ++I + +P ++ IG S + L+ ++++ + +
Sbjct: 122 EQYHSLNEIYSWIEFITERHPDMLTKIHIGSSFEKYPLYVLKVSGKEQTAKNAIWID--- 178
Query: 104 KYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDG--FAAAK 161
+H E + A ++ I ++ G + T LL D Y++P +N DG ++ K
Sbjct: 179 ---CGIHAREWISPAFCLWFIGHITQFYGIIGQYTNLLRLVDFYVMPVVNVDGYDYSWKK 235
Query: 162 EGKCDSLDGYVGRKNAHGVDLNRNFPDQ 189
+ + G DLNRNF +
Sbjct: 236 NRMWRKNRSFYANNHCIGTDLNRNFASK 263
>pdb|1HDU|A Chain A, Crystal Structure Of Bovine Pancreatic Carboxypeptidase A
Complexed With Aminocarbonylphenylalanine At 1.75 A
pdb|1HDU|B Chain B, Crystal Structure Of Bovine Pancreatic Carboxypeptidase A
Complexed With Aminocarbonylphenylalanine At 1.75 A
pdb|1HDU|D Chain D, Crystal Structure Of Bovine Pancreatic Carboxypeptidase A
Complexed With Aminocarbonylphenylalanine At 1.75 A
pdb|1HDU|E Chain E, Crystal Structure Of Bovine Pancreatic Carboxypeptidase A
Complexed With Aminocarbonylphenylalanine At 1.75 A
pdb|1HEE|A Chain A, Crystal Structure Of Bovine Pancreatic Carboxypeptidase A
Complexed With L-N-Hydroxyaminocarbonyl Phenylalanine At
2.3 A
pdb|1HEE|B Chain B, Crystal Structure Of Bovine Pancreatic Carboxypeptidase A
Complexed With L-N-Hydroxyaminocarbonyl Phenylalanine At
2.3 A
pdb|1HEE|D Chain D, Crystal Structure Of Bovine Pancreatic Carboxypeptidase A
Complexed With L-N-Hydroxyaminocarbonyl Phenylalanine At
2.3 A
pdb|1HEE|E Chain E, Crystal Structure Of Bovine Pancreatic Carboxypeptidase A
Complexed With L-N-Hydroxyaminocarbonyl Phenylalanine At
2.3 A
pdb|1IY7|A Chain A, Crystal Structure Of Cpa And Sulfamide-based Inhibitor
Complex
pdb|5CPA|A Chain A, Refined Crystal Structure Of Carboxypeptidase A At 1.54
Angstroms Resolution.
pdb|6CPA|A Chain A, Crystal Structure Of The Complex Of Carboxypeptidase A
With A Strongly Bound Phosphonate In A New Crystalline
Form: Comparison With Structures Of Other Complexes
pdb|7CPA|A Chain A, Comparison Of The Structures Of Three Carboxypeptidase A-
Phosphonate Complexes Determined By X-Ray
Crystallography
pdb|8CPA|A Chain A, Comparison Of The Structures Of Three Carboxypeptidase A-
Phosphonate Complexes Determined By X-Ray
Crystallography
pdb|3CPA|A Chain A, X-Ray Crystallographic Investigation Of Substrate Binding
To Carboxypeptidase A At Subzero Temperature
pdb|4CPA|A Chain A, Refined Crystal Structure Of The Potato Inhibitor Complex
Of Carboxypeptidase A At 2.5 Angstroms Resolution
pdb|4CPA|B Chain B, Refined Crystal Structure Of The Potato Inhibitor Complex
Of Carboxypeptidase A At 2.5 Angstroms Resolution
Length = 307
Score = 43.1 bits (100), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 21/153 (13%)
Query: 46 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKY 105
Y+ E+ F+ V +P LV IG+S +GR ++ ++ S G +P
Sbjct: 12 YHTLDEIYDFMDLLVAQHPELVSKLQIGRSYEGRPIYVLKF-----STGGSN--RPAIWI 64
Query: 106 VANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKC 165
+H E + A V+ + G++ T +L+S DI++ NP+GFA
Sbjct: 65 DLGIHSREWITQATGVWFAKKFTENYGQNPSFTAILDSMDIFLEIVTNPNGFAFTHS--- 121
Query: 166 DSLDGYVGRKNAH--------GVDLNRNFPDQF 190
+ + RK GVD NRN+ F
Sbjct: 122 ---ENRLWRKTRSVTSSSLCVGVDANRNWDAGF 151
>pdb|2QVP|A Chain A, Crystal Structure Of A Putative Metallopeptidase
(Sama_0725) From Shewanella Amazonensis Sb2b At 2.00 A
Resolution
pdb|2QVP|B Chain B, Crystal Structure Of A Putative Metallopeptidase
(Sama_0725) From Shewanella Amazonensis Sb2b At 2.00 A
Resolution
pdb|2QVP|C Chain C, Crystal Structure Of A Putative Metallopeptidase
(Sama_0725) From Shewanella Amazonensis Sb2b At 2.00 A
Resolution
Length = 275
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 24/98 (24%)
Query: 90 VDSPDGRTLMKPMFKYVANMHGDETVG-YALMVFLIQYLVLKDGKDDRITKLLNSTDIYI 148
+ SP G+ P A HG+E+ G + L+ FL Q DG+ L ++ +
Sbjct: 56 LQSP-GQKAGLPNLLISAGFHGEESAGPWGLLHFLSQL----DGE------LFKRVNLSV 104
Query: 149 VPSINPDGFAAAKEGKCDSLDGYVGRKNAHGVDLNRNF 186
+P +NP GFA R N G + NR F
Sbjct: 105 LPLVNPTGFAKGH------------RFNELGENPNRGF 130
>pdb|4AXV|A Chain A, Biochemical And Structural Characterization Of The Mpaa
Amidase As Part Of A Conserved Scavenging Pathway For
Peptidoglycan Derived Peptides In Gamma-Proteobacteria
Length = 243
Score = 31.6 bits (70), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 53/124 (42%), Gaps = 33/124 (26%)
Query: 66 LVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFLIQ 125
L+ + GKSV G L + V+S + R L+ +A HGDET A + ++
Sbjct: 20 LITPTSYGKSVLGAPL--LYFPAQVES-NSRGLI------LAGTHGDETASIAGLSCALR 70
Query: 126 YLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAHGVDLNRN 185
L + K D ++ S NPD A + G R NA+ VDLNR
Sbjct: 71 SLPAECLKHD------------VILSXNPD---ANQLGT---------RANANQVDLNRA 106
Query: 186 FPDQ 189
FP Q
Sbjct: 107 FPTQ 110
>pdb|2C1C|A Chain A, Structural Basis Of The Resistance Of An Insect
Carboxypeptidase To Plant Protease Inhibitors
pdb|2C1C|B Chain B, Structural Basis Of The Resistance Of An Insect
Carboxypeptidase To Plant Protease Inhibitors
Length = 312
Score = 31.2 bits (69), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 57/140 (40%), Gaps = 13/140 (9%)
Query: 52 LDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHG 111
+D ++ + YP + +S +GR + ++I+ + + KP+ +H
Sbjct: 12 IDEYLDYIGEKYPDVATVVNAAESFEGRPIKYIKIS----TTNFEDENKPVIFIDGGIHA 67
Query: 112 DETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEG-----KCD 166
E + + + I LV ++D LL D ++P +NPDG+ K
Sbjct: 68 REWISPPSVTWAIHKLVEDVTEND----LLEKFDWILLPVVNPDGYKYTFTNERFWRKTR 123
Query: 167 SLDGYVGRKNAHGVDLNRNF 186
S + + G D NRNF
Sbjct: 124 STNNNPLSQICRGADGNRNF 143
>pdb|1CPB|B Chain B, Structure Of Carboxypeptidase B At 2.8 Angstroms
Resolution
Length = 217
Score = 27.7 bits (60), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Query: 137 ITKLLNSTDIYIVPSINPDG--FAAAKEGKCDSLDGYVGRKNAHGVDLNRNF 186
+T+ L+ D Y++P +N DG + + G DLNRNF
Sbjct: 4 MTEFLDKLDFYVLPVVNIDGYIYTWTTNRMWRKTRSTRAGSSCTGTDLNRNF 55
>pdb|1DUB|A Chain A, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|1DUB|B Chain B, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|1DUB|C Chain C, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|1DUB|D Chain D, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|1DUB|E Chain E, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|1DUB|F Chain F, 2-Enoyl-Coa Hydratase, Data Collected At 100 K, Ph 6.5
pdb|2DUB|A Chain A, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
pdb|2DUB|B Chain B, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
pdb|2DUB|C Chain C, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
pdb|2DUB|D Chain D, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
pdb|2DUB|E Chain E, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
pdb|2DUB|F Chain F, Enoyl-Coa Hydratase Complexed With Octanoyl-Coa
Length = 261
Score = 27.7 bits (60), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 30 LTGLEDADSAGIDLQRYYNSTELDAFILKTVKSYPHLVR 68
LTG E A +AG D++ N T D + K + + H+ R
Sbjct: 58 LTGGEKAFAAGADIKEMQNRTFQDCYSGKFLSHWDHITR 96
>pdb|1MJ3|A Chain A, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
pdb|1MJ3|B Chain B, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
pdb|1MJ3|C Chain C, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
pdb|1MJ3|D Chain D, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
pdb|1MJ3|E Chain E, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
pdb|1MJ3|F Chain F, Crystal Structure Analysis Of Rat Enoyl-Coa Hydratase In
Complex With Hexadienoyl-Coa
Length = 260
Score = 27.7 bits (60), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 30 LTGLEDADSAGIDLQRYYNSTELDAFILKTVKSYPHLVR 68
LTG E A +AG D++ N T D + K + + H+ R
Sbjct: 57 LTGGEKAFAAGADIKEMQNRTFQDCYSGKFLSHWDHITR 95
>pdb|1EY3|A Chain A, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
pdb|1EY3|B Chain B, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
pdb|1EY3|C Chain C, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
pdb|1EY3|D Chain D, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
pdb|1EY3|E Chain E, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
pdb|1EY3|F Chain F, Structure Of Enoyl-Coa Hydratase Complexed With The
Substrate Dac-Coa
Length = 258
Score = 27.7 bits (60), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 30 LTGLEDADSAGIDLQRYYNSTELDAFILKTVKSYPHLVR 68
LTG E A +AG D++ N T D + K + + H+ R
Sbjct: 55 LTGGEKAFAAGADIKEMQNRTFQDCYSGKFLSHWDHITR 93
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.138 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,101,256
Number of Sequences: 62578
Number of extensions: 252467
Number of successful extensions: 624
Number of sequences better than 100.0: 61
Number of HSP's better than 100.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 539
Number of HSP's gapped (non-prelim): 61
length of query: 195
length of database: 14,973,337
effective HSP length: 94
effective length of query: 101
effective length of database: 9,091,005
effective search space: 918191505
effective search space used: 918191505
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 49 (23.5 bits)