Query psy11075
Match_columns 195
No_of_seqs 112 out of 1242
Neff 8.1
Searched_HMMs 46136
Date Fri Aug 16 17:24:01 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11075.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/11075hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2650|consensus 100.0 1.5E-43 3.3E-48 304.8 15.1 184 3-192 67-264 (418)
2 cd03870 M14_CPA Peptidase M14 100.0 9.2E-40 2E-44 273.8 15.6 144 42-192 2-147 (301)
3 cd03871 M14_CPB Peptidase M14 100.0 7.3E-40 1.6E-44 274.2 14.9 144 42-192 2-147 (300)
4 cd03872 M14_CPA6 Carboxypeptid 100.0 7.4E-40 1.6E-44 273.8 14.4 143 45-193 1-145 (300)
5 cd06247 M14_CPO Peptidase M14 100.0 1.3E-39 2.7E-44 272.4 15.3 144 43-192 1-146 (298)
6 cd06246 M14_CPB2 Peptidase M14 100.0 1.6E-39 3.6E-44 272.3 15.5 145 43-193 2-148 (300)
7 cd03863 M14_CPD_II The second 100.0 2.8E-39 6.1E-44 277.7 15.9 142 44-191 4-145 (375)
8 cd03868 M14_CPD_I The first ca 100.0 1.1E-38 2.4E-43 274.9 16.5 143 46-192 1-143 (372)
9 cd06245 M14_CPD_III The third 100.0 9.5E-39 2.1E-43 273.7 15.0 140 45-190 1-140 (363)
10 cd06248 M14_CPA_CPB_like Pepti 100.0 1.7E-38 3.6E-43 267.0 15.0 146 43-192 1-148 (304)
11 cd03869 M14_CPX_like Peptidase 100.0 2.9E-38 6.3E-43 272.3 16.1 146 44-192 3-153 (405)
12 cd03867 M14_CPZ Peptidase M14- 100.0 4.3E-38 9.2E-43 272.7 15.6 143 46-191 1-144 (395)
13 cd03866 M14_CPM Peptidase M14 100.0 3E-38 6.5E-43 271.9 14.3 142 44-192 3-144 (376)
14 cd03859 M14_CPT Peptidase M14- 100.0 1.5E-37 3.2E-42 260.5 15.2 145 44-192 2-152 (295)
15 cd03865 M14_CPE_H Peptidase M1 100.0 3.5E-37 7.6E-42 265.6 15.5 143 44-189 3-146 (402)
16 cd06905 Peptidase_M14-like_8 A 100.0 6.5E-37 1.4E-41 261.5 15.9 122 43-167 1-123 (360)
17 cd03864 M14_CPN Peptidase M14 100.0 6.7E-37 1.4E-41 264.1 15.8 142 46-190 1-143 (392)
18 cd03858 M14_CP_N-E_like Carbox 100.0 7.2E-37 1.6E-41 264.0 15.9 141 46-192 1-142 (374)
19 smart00631 Zn_pept Zn_pept. 100.0 4.2E-36 9.2E-41 249.8 15.6 141 46-192 1-141 (277)
20 cd06227 Peptidase_M14-like_2 A 100.0 1.1E-35 2.5E-40 245.8 14.3 137 46-193 2-143 (272)
21 cd03860 M14_CP_A-B_like The Pe 100.0 1.6E-35 3.5E-40 248.1 15.3 139 46-192 1-141 (294)
22 PF00246 Peptidase_M14: Zinc c 100.0 9.7E-34 2.1E-38 235.5 13.8 134 52-192 1-134 (279)
23 cd06226 M14_CPT_like Peptidase 100.0 4.6E-33 1E-37 232.3 13.0 129 63-193 1-140 (293)
24 cd06242 Peptidase_M14-like_1_5 100.0 8.7E-32 1.9E-36 222.4 13.7 132 46-195 2-133 (268)
25 cd06237 M14_Nna1_like_3 A bact 100.0 1.4E-31 3E-36 218.4 12.7 128 44-195 5-132 (244)
26 cd06234 M14_Nna1_like_1 A bact 100.0 9.7E-31 2.1E-35 215.1 12.3 127 40-188 4-130 (263)
27 KOG2649|consensus 100.0 2.1E-30 4.4E-35 222.9 13.6 144 43-192 66-209 (500)
28 cd06908 M14_AGBL4_like Peptida 100.0 2.4E-30 5.3E-35 212.4 12.3 117 56-188 1-117 (261)
29 cd06228 Peptidase_M14-like_3 A 100.0 3.4E-30 7.4E-35 217.2 10.4 113 73-192 7-136 (332)
30 cd06239 Peptidase_M14-like_1_2 100.0 7.9E-29 1.7E-33 200.3 11.1 113 59-195 2-114 (231)
31 cd06229 M14_Endopeptidase_I Pe 100.0 4.8E-29 1E-33 205.1 10.0 108 75-192 1-127 (255)
32 cd06241 Peptidase_M14-like_1_4 100.0 1.1E-28 2.3E-33 203.9 11.6 136 54-195 1-141 (266)
33 cd03856 M14_Nna1_like Peptidas 100.0 1.3E-28 2.9E-33 203.6 12.2 127 43-194 7-136 (269)
34 cd06235 M14_Nna1_like_2 Subgro 99.9 1E-27 2.2E-32 197.3 11.5 111 63-188 9-119 (258)
35 cd06243 Peptidase_M14-like_1_6 99.9 1.1E-27 2.5E-32 194.2 10.5 110 72-195 1-110 (236)
36 cd06244 Peptidase_M14-like_1_7 99.9 5.3E-27 1.1E-31 192.2 9.1 112 72-195 1-149 (268)
37 cd06238 Peptidase_M14-like_1_1 99.9 5.3E-27 1.1E-31 193.9 8.6 122 72-195 1-156 (271)
38 cd06907 M14_AGBL2-3_like Pepti 99.9 2.1E-26 4.6E-31 188.3 11.8 113 64-191 11-123 (261)
39 cd06236 M14_AGBL5_like Peptida 99.9 6.5E-26 1.4E-30 189.1 11.6 110 66-188 15-142 (304)
40 cd03857 Peptidase_M14-like_1 P 99.9 7.8E-26 1.7E-30 183.0 10.4 109 72-195 1-111 (226)
41 cd06240 Peptidase_M14-like_1_3 99.9 2.1E-25 4.5E-30 184.1 9.2 126 68-195 1-158 (273)
42 cd03862 Peptidase_M14-like_7 A 99.9 6.6E-25 1.4E-29 181.6 10.3 96 77-191 8-103 (273)
43 cd06906 M14_Nna1 Peptidase M14 99.9 5.8E-24 1.3E-28 174.8 10.8 118 57-188 5-126 (278)
44 PRK10602 murein peptide amidas 99.9 3.4E-24 7.3E-29 173.7 7.3 94 67-193 15-109 (237)
45 cd06231 Peptidase_M14-like_4 A 99.9 2.5E-21 5.3E-26 157.4 9.4 95 66-188 14-109 (236)
46 cd06232 Peptidase_M14-like_5 P 99.8 3.2E-21 6.9E-26 154.0 6.8 117 47-192 2-122 (240)
47 cd06904 M14_MpaA_like Peptidas 99.8 7.7E-20 1.7E-24 143.0 6.4 69 103-192 1-69 (178)
48 cd00596 Peptidase_M14_like The 99.8 1.3E-19 2.7E-24 143.3 6.0 75 103-191 1-75 (196)
49 cd06233 Peptidase_M14-like_6 P 99.7 6.6E-16 1.4E-20 128.1 10.8 119 47-193 3-125 (283)
50 KOG3641|consensus 99.6 9E-16 1.9E-20 134.5 6.6 132 37-188 370-503 (650)
51 COG2866 Predicted carboxypepti 99.5 4E-14 8.6E-19 122.1 7.7 103 66-189 120-223 (374)
52 cd06250 M14_PaAOTO_like An unc 99.4 5.6E-13 1.2E-17 114.7 9.1 99 71-189 4-105 (359)
53 cd06255 M14_ASTE_ASPA_like_5 A 99.3 7.5E-12 1.6E-16 105.1 7.7 86 73-188 3-91 (293)
54 cd06251 M14_ASTE_ASPA_like_1 A 99.3 6.7E-12 1.5E-16 105.1 6.4 82 80-191 8-89 (287)
55 PF10994 DUF2817: Protein of u 99.2 1.6E-10 3.5E-15 98.5 10.7 116 47-190 3-122 (341)
56 cd06254 M14_ASTE_ASPA_like_4 A 99.2 4.5E-11 9.8E-16 100.1 6.8 83 79-191 4-88 (288)
57 cd06230 M14_ASTE_ASPA_like The 99.1 5E-11 1.1E-15 98.0 5.5 65 103-190 1-65 (252)
58 cd06252 M14_ASTE_ASPA_like_2 A 99.1 2.2E-10 4.7E-15 97.2 7.0 83 78-191 21-104 (316)
59 cd06253 M14_ASTE_ASPA_like_3 A 99.1 3.5E-10 7.5E-15 95.2 7.1 74 100-189 19-93 (298)
60 PF04952 AstE_AspA: Succinylgl 99.0 3E-10 6.6E-15 94.9 6.1 67 101-189 3-70 (292)
61 TIGR02994 ectoine_eutE ectoine 99.0 8.6E-10 1.9E-14 93.8 7.2 80 79-189 35-115 (325)
62 COG3608 Predicted deacylase [G 98.7 3.4E-08 7.3E-13 83.4 6.5 67 99-187 47-114 (331)
63 PRK02259 aspartoacylase; Provi 98.6 3.1E-08 6.6E-13 83.1 4.7 66 101-190 3-68 (288)
64 cd06256 M14_ASTE_ASPA_like_6 A 98.6 6.3E-08 1.4E-12 82.5 6.1 67 101-190 35-101 (327)
65 PRK05324 succinylglutamate des 98.6 7.5E-08 1.6E-12 82.1 6.1 71 99-192 46-116 (329)
66 cd06909 M14_ASPA Aspartoacylas 98.6 5.2E-08 1.1E-12 81.4 4.9 67 101-191 1-67 (282)
67 TIGR03242 arg_catab_astE succi 98.6 9.7E-08 2.1E-12 81.2 5.4 69 99-190 40-108 (319)
68 cd06910 M14_ASTE_ASPA_like_7 A 98.5 1E-07 2.2E-12 79.3 5.2 66 101-190 1-71 (272)
69 cd03855 M14_ASTE Peptidase M14 98.5 3.3E-07 7.1E-12 78.0 7.4 71 98-191 40-110 (322)
70 COG2988 Succinylglutamate desu 97.0 0.00074 1.6E-08 56.1 4.1 69 102-193 45-113 (324)
71 PF02244 Propep_M14: Carboxype 93.0 0.084 1.8E-06 34.7 2.4 36 2-37 37-73 (74)
72 PF09892 DUF2119: Uncharacteri 92.7 0.18 3.9E-06 39.5 4.1 45 101-158 7-51 (193)
73 COG4073 Uncharacterized protei 91.4 0.14 3.1E-06 39.3 2.1 41 104-157 18-58 (198)
74 KOG3641|consensus 72.6 1.9 4E-05 39.4 1.3 41 133-188 152-192 (650)
75 PF07454 SpoIIP: Stage II spor 34.1 2.6E+02 0.0057 23.2 7.7 76 44-127 138-214 (268)
76 PF05127 Helicase_RecD: Helica 33.4 44 0.00096 26.0 2.8 31 99-129 113-143 (177)
77 PF12444 Sox_N: Sox developmen 30.1 37 0.0008 23.2 1.6 17 135-151 64-80 (84)
78 TIGR02867 spore_II_P stage II 24.9 3.5E+02 0.0076 21.4 7.7 71 46-128 63-133 (196)
79 COG4271 Predicted nucleotide-b 22.6 2.8E+02 0.0061 22.3 5.5 61 97-161 79-152 (233)
80 PF13174 TPR_6: Tetratricopept 22.5 1.2E+02 0.0026 15.2 2.7 18 48-65 15-32 (33)
81 PF06067 DUF932: Domain of unk 20.8 4.4E+02 0.0096 21.1 6.7 36 46-83 11-46 (239)
82 PF04327 DUF464: Protein of un 20.5 1.6E+02 0.0035 20.4 3.5 21 49-69 83-103 (103)
83 cd05313 NAD_bind_2_Glu_DH NAD( 20.2 2.1E+02 0.0046 23.6 4.6 27 106-132 7-33 (254)
No 1
>KOG2650|consensus
Probab=100.00 E-value=1.5e-43 Score=304.85 Aligned_cols=184 Identities=29% Similarity=0.417 Sum_probs=166.4
Q ss_pred eeccchhh-hhhhhccCCCceeEEecCChhhHHHhccCC----------CCCCCCCCHHHHHHHHHHHHHHCCCcEEEEE
Q psy11075 3 LIVPSLSL-LLCHVTLSTAADYYFDFDDLTGLEDADSAG----------IDLQRYYNSTELDAFILKTVKSYPHLVRAET 71 (195)
Q Consensus 3 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~y~t~~ei~~~l~~l~~~~p~~v~~~~ 71 (195)
|||++..+ -+-..+.+.+++|.+.+.|+++.++++... +.|..|+++++|.+||+.|+++||++|++..
T Consensus 67 i~V~~~~~~~~~~~L~~~~i~~~v~i~d~q~~i~~~~~~~~~~~~~~~~~~~~~Y~~le~I~~~l~~l~~~~P~~v~~~~ 146 (418)
T KOG2650|consen 67 ILVPPEDLAAFKAFLKSANISYEVLIEDLQKLIDEERVEVRLRNRRSNDFNWERYHSLEEIYEWLDNLAERYPDLVSLIH 146 (418)
T ss_pred EEECHHHHHHHHHHHHhcCCceEEEhhhHHHHHHHHhhhccccccccccccHHHhcCHHHHHHHHHHHHHhCCCceEEEE
Confidence 67777755 556677799999999999999999988653 7899999999999999999999999999999
Q ss_pred ccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHHHHHHHHHhcCCChHHHHhhccceEEEEec
Q psy11075 72 IGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPS 151 (195)
Q Consensus 72 iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~~~~L~~~~~~d~~~~~ll~~~~l~iiP~ 151 (195)
+|+|+|||+|.+++|+.+. ...||+|||.||+|||||+++.++++++++|+..|+.|+.++++|++++|+|+|+
T Consensus 147 IG~s~EgR~i~~lkIs~~~------~~~k~~I~id~GiHAREWIspAta~~~i~qLv~~y~~~~~~~~ll~~~dwyI~Pv 220 (418)
T KOG2650|consen 147 IGRSYEGRPLKVLKISGGD------NRNKKAIFIDAGIHAREWISPATALWFINQLVSSYGRDPAVTKLLDKLDWYILPV 220 (418)
T ss_pred cccccCCceEEEEEecCCC------CCCCceEEEecchhHHhhccHHHHHHHHHHHHhhhccCHHHHHHHhcCcEEEEee
Confidence 9999999999999999841 3578999999999999999999999999999999999999999999999999999
Q ss_pred cCcccchhhhccCCCCCCC--CCC-CCCCccccCCCCCCcCCCc
Q psy11075 152 INPDGFAAAKEGKCDSLDG--YVG-RKNAHGVDLNRNFPDQFEY 192 (195)
Q Consensus 152 ~NPDG~~~~~~~~~~~~~~--~~~-r~n~~GvDlNRnf~~~w~~ 192 (195)
+|||||+|+++.+|.|++. ... ...|.||||||||+++|+.
T Consensus 221 ~NPDGYeYS~t~~R~WRKnRs~~~~~~~C~GvDlNRNfd~~W~~ 264 (418)
T KOG2650|consen 221 VNPDGYEYSRTTDRLWRKNRSPNGCASRCIGVDLNRNFDFHWGG 264 (418)
T ss_pred ecCCcceeeecccccccccCCCCCCCCeeeCCCCCCCccCcCCC
Confidence 9999999999999987643 333 2359999999999999987
No 2
>cd03870 M14_CPA Peptidase M14 Carboxypeptidase (CP) A (CPA) belongs to the A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPA enzymes generally favor hydrophobic residues. A/B subfamily enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The procarboxypeptidase A (PCPA) is produced by the exocrine pancreas and stored as a stable zymogen in the pancreatic granules until secretion into the digestive tract occurs. This subfamily includes CPA1, CPA2 and CPA4 forms. Within these A forms, there are slightly different specificities, with CPA1 preferring aliphatic and small aromatic residues, and CPA2 p
Probab=100.00 E-value=9.2e-40 Score=273.80 Aligned_cols=144 Identities=25% Similarity=0.349 Sum_probs=132.7
Q ss_pred CCCCCCCHHHHHHHHHHHHHHCCCcEEEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHH
Q psy11075 42 DLQRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMV 121 (195)
Q Consensus 42 ~~~~y~t~~ei~~~l~~l~~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l 121 (195)
+|..|++++|+.++|++|+++||+++++.++|+|+|||+|++++|++. ...||.|+|.||+||+||+|+++++
T Consensus 2 ~~~~Y~~~~ei~~~l~~L~~~~p~~v~~~~iG~S~eGR~I~~l~is~~-------~~~kp~v~i~~giHarE~i~~~~~l 74 (301)
T cd03870 2 NYATYHTLDEIYDFMDLLVAEHPNLVSKLQIGRSYEGRPIYVLKFSTG-------GSNRPAIWIDAGIHSREWITQATGV 74 (301)
T ss_pred CccccCCHHHHHHHHHHHHHHCCCceEEEecccCCCCCeEEEEEEecC-------CCCCceEEEeccccccchhhHHHHH
Confidence 689999999999999999999999999999999999999999999873 1268999999999999999999999
Q ss_pred HHHHHHHHhcCCChHHHHhhccceEEEEeccCcccchhhhccCCCCC--CCCCCCCCCccccCCCCCCcCCCc
Q psy11075 122 FLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSL--DGYVGRKNAHGVDLNRNFPDQFEY 192 (195)
Q Consensus 122 ~~~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~--~~~~~r~n~~GvDlNRnf~~~w~~ 192 (195)
++++.|+.+|+.|+.++++|++++|+|||++||||++++++.++.|+ +......+|+||||||||+++|+.
T Consensus 75 ~~~~~L~~~~~~d~~~~~lLd~~~i~ivP~~NPDG~~~s~~~~r~wrknr~~~~~~~~~GVDLNRNf~~~w~~ 147 (301)
T cd03870 75 WFAKKITEDYGQDPSFTAILDSMDIFLEIVTNPDGYVFTHSQNRLWRKTRSVTSGSLCVGVDPNRNWDAGFGG 147 (301)
T ss_pred HHHHHHHHhcccCHHHHHHHHhCcEEEEeeecCchhhheecccceeecCCCCCCCCCccccccccCCCcccCc
Confidence 99999999998899999999999999999999999999988877654 444566789999999999999974
No 3
>cd03871 M14_CPB Peptidase M14 Carboxypeptidase B (CPB) belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Carboxypeptidase B (CPB) enzymes only cleave the basic residues lysine or arginine. A/B subfamily enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The procarboxypeptidase B (PCPB) is produced by the exocrine pancreas and stored as stable zymogen in the pancreatic granules until secretion into the digestive tract occurs. PCPB has been reported to be a good serum marker for the diagnosis of acute pancreatitis and graft rejection in pancreas transplant recipients.
Probab=100.00 E-value=7.3e-40 Score=274.16 Aligned_cols=144 Identities=22% Similarity=0.375 Sum_probs=131.9
Q ss_pred CCCCCCCHHHHHHHHHHHHHHCCCcEEEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHH
Q psy11075 42 DLQRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMV 121 (195)
Q Consensus 42 ~~~~y~t~~ei~~~l~~l~~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l 121 (195)
.|++|++|+||.++|++|+++||+++++.+||+|+|||+|++++|++. ...||.|+|.||+|||||+|+++++
T Consensus 2 ~~~~Y~~~~ei~~~l~~la~~~p~~v~~~~IG~S~eGR~i~~l~i~~~-------~~~kp~v~i~~giHarE~i~~~~~l 74 (300)
T cd03871 2 SYEKYNNWETIEAWTEQVASENPDLISRSQIGTTFEGRPIYLLKVGKP-------GVNKPAIFMDCGFHAREWISPAFCQ 74 (300)
T ss_pred CccccCCHHHHHHHHHHHHHHCCCceEEEEeeeCCCCCeeEEEEEccC-------CCCCCeEEEeccccccccccHHHHH
Confidence 589999999999999999999999999999999999999999999973 2358999999999999999999999
Q ss_pred HHHHHHHHhcCCChHHHHhhccceEEEEeccCcccchhhhccCCCCC--CCCCCCCCCccccCCCCCCcCCCc
Q psy11075 122 FLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSL--DGYVGRKNAHGVDLNRNFPDQFEY 192 (195)
Q Consensus 122 ~~~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~--~~~~~r~n~~GvDlNRnf~~~w~~ 192 (195)
++++.|+..|++|+.++++|++++|+|||++||||++++++.++.|+ +......+|.||||||||+++|+.
T Consensus 75 ~~i~~l~~~y~~d~~~~~lL~~~~~~ivP~~NPDG~~~s~~~~r~wrknr~~~~~~~c~GVDLNRNf~~~w~~ 147 (300)
T cd03871 75 WFVREAVRTYGREAIMTELLDKLDFYVLPVLNIDGYIYTWTKNRMWRKTRSTNAGSSCIGTDPNRNFNAGWCT 147 (300)
T ss_pred HHHHHHHHHccCCHHHHHHHHcCeEEEEEeecCCcCeeeeccCHHHHHhcCCCCCCCccccccCcCCCCccCC
Confidence 99999999998899999999999999999999999999998887654 334445568999999999999975
No 4
>cd03872 M14_CPA6 Carboxypeptidase (CP) A6 (CPA6, also known as CPAH; EC 3.4.17.1), belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPA6 prefers large hydrophobic C-terminal amino acids as well as histidine, while peptides with a penultimate glycine or proline are very poorly cleaved. Several neuropeptides are processed by CPA6, including Met- and Leu-enkephalin, angiotensin I, and neurotensin. CPA6 converts enkephalin and neurotensin into forms known to be inactive toward their receptors, but converts inactive angiotensin I into the biologically active angiotensin II. Thus, CPA6 plays a possible role in the regulation of neuropeptides in the extracellular environment within the olfactory bulb where it is highly expresse
Probab=100.00 E-value=7.4e-40 Score=273.79 Aligned_cols=143 Identities=24% Similarity=0.336 Sum_probs=131.0
Q ss_pred CCCCHHHHHHHHHHHHHHCCCcEEEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHHHH
Q psy11075 45 RYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFLI 124 (195)
Q Consensus 45 ~y~t~~ei~~~l~~l~~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~~ 124 (195)
.|++++|+.++|++|+++||+++++.++|+|+|||+|++++|+.. ....||.|+|.||+|||||+|++++++++
T Consensus 1 ~Y~~~~ei~~~l~~L~~~~p~~v~l~~iG~S~EGR~i~~l~i~~~------~~~~k~~i~i~~giHarEwi~~~~~~~~i 74 (300)
T cd03872 1 VYHPLEEIESWMFYMNKTHSDLVHLFSIGKSYEGRSLYVLKLGKR------TRSYKKAVWIDCGIHAREWIGPAFCQWFV 74 (300)
T ss_pred CCCCHHHHHHHHHHHHHHCCCceEEEEeeecCCCCceEEEEEecC------CCCCCCeEEEecccccccccCHHHHHHHH
Confidence 389999999999999999999999999999999999999999873 12368999999999999999999999999
Q ss_pred HHHHHhcCCChHHHHhhccceEEEEeccCcccchhhhccCCCCC--CCCCCCCCCccccCCCCCCcCCCcc
Q psy11075 125 QYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSL--DGYVGRKNAHGVDLNRNFPDQFEYE 193 (195)
Q Consensus 125 ~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~--~~~~~r~n~~GvDlNRnf~~~w~~~ 193 (195)
++|+.+|..|+.++++|++++|+|||++|||||++++++++.|+ ++...+.+|+||||||||+++|+.+
T Consensus 75 ~~Ll~~~~~d~~~~~lL~~~~~~ivP~vNPDGy~ys~~~~r~wrknR~~~~~~~c~GVDLNRNf~~~w~~~ 145 (300)
T cd03872 75 KEALNSYQTDPAMKKMLNQLYFYVMPVFNVDGYHYSWTNDRFWRKTRSKNSRYQCRGVDANRNWKVKWCDE 145 (300)
T ss_pred HHHHHhccCChHHHHHHhhCeEEEEeeecCCcceeeeccchhhhccCCCCCCCCccccccccccCcccCCC
Confidence 99999998899999999999999999999999999999887654 4455678899999999999999753
No 5
>cd06247 M14_CPO Peptidase M14 carboxypeptidase (CP) O (CPO, also known as metallocarboxypeptidase C; EC 3.4.17.) belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPO has not been well characterized as yet, and little is known about it. Based on modeling studies, CPO has been suggested to have specificity for acidic residues rather than aliphatic/aromatic residues as in A-like enzymes or basic residues as in B-like enzymes. It remains to be demonstrated that CPO is functional as an MCP.
Probab=100.00 E-value=1.3e-39 Score=272.36 Aligned_cols=144 Identities=21% Similarity=0.309 Sum_probs=131.3
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCCcEEEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHH
Q psy11075 43 LQRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVF 122 (195)
Q Consensus 43 ~~~y~t~~ei~~~l~~l~~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~ 122 (195)
|..|++|+|+.++|++|+++||+++++.++|+|+|||+|++++|++. ....||.|++.||+|||||+|++++++
T Consensus 1 ~~~Y~~~~ei~~~l~~L~~~~p~~v~l~~iG~S~EgR~I~~l~i~~~------~~~~k~~i~i~~giHarEwi~~~~~l~ 74 (298)
T cd06247 1 YTKYHPMDEIYNWMDQIKEKYSELVSQHYLGCTYELRPMYYLKIGWP------SDKPKKIIWMDCGIHAREWISPAFCQW 74 (298)
T ss_pred CCCcCCHHHHHHHHHHHHHHCCCcEEEEeceECcCCceEEEEEeecC------CCCCCcEEEEeccccccccccHHHHHH
Confidence 67899999999999999999999999999999999999999999863 123578999999999999999999999
Q ss_pred HHHHHHHhcCCChHHHHhhccceEEEEeccCcccchhhhccCCCCCC--CCCCCCCCccccCCCCCCcCCCc
Q psy11075 123 LIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLD--GYVGRKNAHGVDLNRNFPDQFEY 192 (195)
Q Consensus 123 ~~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~--~~~~r~n~~GvDlNRnf~~~w~~ 192 (195)
++++|+.+|..|+.++++|++++|+|||++|||||++.++.++.|++ ....+.+|+||||||||+++|+.
T Consensus 75 ~i~~Ll~~y~~d~~~~~ll~~~~i~ivP~~NPDGy~ys~~~~r~wRknr~~~~~~~c~GVDLNRNf~~~w~~ 146 (298)
T cd06247 75 FVKEILQNYKTDPILRKVLKNVDFYVLPVLNIDGYIYTWTTDRLWRKNRSPHNNGTCYGVDLNRNFNSQWCS 146 (298)
T ss_pred HHHHHHHHhccCHHHHHHHhcCeEEEEeeecCCcceEEecccceecccCCCCCCCCccccccccCCCCcccc
Confidence 99999999988999999999999999999999999999988876654 33445689999999999999974
No 6
>cd06246 M14_CPB2 Peptidase M14 Carboxypeptidase (CP) B2 (CPB2, also known as plasma carboxypeptidase B, carboxypeptidase U, and CPU), belongs to the carboxpeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPB2 enzyme displays B-like activity; it only cleaves the basic residues lysine or arginine. It is produced and secreted by the liver as the inactive precursor, procarboxypeptidase U or PCPB2, commonly referred to as thrombin-activatable fibrinolysis inhibitor (TAFI). It circulates in plasma as a zymogen bound to plasminogen, and the active enzyme, TAFIa, inhibits fibrinolysis. It is highly regulated, increased TAFI concentrations are thought to increase the risk of thrombosis and coronary artery disease by reducing fibrinolytic activity whil
Probab=100.00 E-value=1.6e-39 Score=272.31 Aligned_cols=145 Identities=22% Similarity=0.348 Sum_probs=132.1
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCCcEEEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHH
Q psy11075 43 LQRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVF 122 (195)
Q Consensus 43 ~~~y~t~~ei~~~l~~l~~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~ 122 (195)
|.+|++++|+.++|++|+++||+++++.++|+|+|||+|++++|++. . ...||.|+|.||+||+||+|++++++
T Consensus 2 ~~~Y~~~~ei~~~l~~l~~~~p~~v~~~~iG~S~egR~I~~l~is~~---~---~~~k~~v~i~~giHarE~i~~~~~l~ 75 (300)
T cd06246 2 YEQYHSLNEIYSWIEFITERHSDMLEKIHIGSSFEKRPLYVLKVSGK---E---QTAKNAIWIDCGIHAREWISPAFCLW 75 (300)
T ss_pred CCccCCHHHHHHHHHHHHHHCCCcEEEEecccCCCCCeEEEEEEeCC---C---CCCCCeEEEecccCccchhhHHHHHH
Confidence 78999999999999999999999999999999999999999999873 1 34689999999999999999999999
Q ss_pred HHHHHHHhcCCChHHHHhhccceEEEEeccCcccchhhhccCCCCC--CCCCCCCCCccccCCCCCCcCCCcc
Q psy11075 123 LIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSL--DGYVGRKNAHGVDLNRNFPDQFEYE 193 (195)
Q Consensus 123 ~~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~--~~~~~r~n~~GvDlNRnf~~~w~~~ 193 (195)
+++.|+..|+.|+.++++|++++|+|+|++||||+++++++++.|+ +......+|+||||||||+++|+.+
T Consensus 76 ~i~~Ll~~~~~d~~~~~lL~~~~i~ivP~~NPDG~~~~~~~~r~wRknr~~~~~~~~~GVDLNRNf~~~w~~~ 148 (300)
T cd06246 76 FVGHATQFYGIDGQMTNLLRHMDFYIMPVMNVDGYDYTWKKNRMWRKNRSFYANSHCIGTDLNRNFDAKWCCE 148 (300)
T ss_pred HHHHHHHHhcCCHHHHHHHHhCeEEEEEeecCCceeEEEeccceeecCCCCCCCCCccCcccccccccccCCC
Confidence 9999999888899999999999999999999999999998887655 3344557899999999999999753
No 7
>cd03863 M14_CPD_II The second carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3.4.17.22), domain II. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, while the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally ac
Probab=100.00 E-value=2.8e-39 Score=277.67 Aligned_cols=142 Identities=42% Similarity=0.733 Sum_probs=131.6
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCcEEEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHHH
Q psy11075 44 QRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFL 123 (195)
Q Consensus 44 ~~y~t~~ei~~~l~~l~~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~ 123 (195)
..||+|+||.++|++|+++||+++++.++|+|+|||+|++++|++. ++...++||.|+++|++||+||+|++++++|
T Consensus 4 f~~h~y~ei~~~l~~l~~~~P~i~~l~~IG~S~eGR~I~~l~Is~~---~~~~~~~kp~v~~~g~iHg~E~ig~~~~l~l 80 (375)
T cd03863 4 FRHHHFSDMEIFLRRYANEYPSITRLYSVGKSVELRELYVMEISDN---PGIHEPGEPEFKYIGNMHGNEVVGRELLLNL 80 (375)
T ss_pred CccCCHHHHHHHHHHHHHHCCCcEEEEEcccCCccceEEEEEEecC---CCcccCCCCeEEEEccccCCcHHHHHHHHHH
Confidence 3569999999999999999999999999999999999999999973 3333457999999999999999999999999
Q ss_pred HHHHHHhcCCChHHHHhhccceEEEEeccCcccchhhhccCCCCCCCCCCCCCCccccCCCCCCcCCC
Q psy11075 124 IQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAHGVDLNRNFPDQFE 191 (195)
Q Consensus 124 ~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w~ 191 (195)
+++||.+|+.|+.++++|++++|+|+|++||||+++.+++++.|+ .+|.|++|||||||||++|.
T Consensus 81 i~~L~~~y~~d~~v~~ll~~~~i~IvP~~NPDG~e~~~~~~~~~~---~~R~n~~GVDLNRNfp~~~~ 145 (375)
T cd03863 81 IEYLCKNFGTDPEVTDLVQSTRIHIMPSMNPDGYEKSQEGDRGGT---VGRNNSNNYDLNRNFPDQFF 145 (375)
T ss_pred HHHHHHhccCCHHHHHHHhCCEEEEEeccCCchHHheecCCcccc---cccccCCCcccccCCccccc
Confidence 999999998999999999999999999999999999999888764 37999999999999999995
No 8
>cd03868 M14_CPD_I The first carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3.4.17.22), domain I. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally active at p
Probab=100.00 E-value=1.1e-38 Score=274.90 Aligned_cols=143 Identities=53% Similarity=0.967 Sum_probs=130.7
Q ss_pred CCCHHHHHHHHHHHHHHCCCcEEEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHHHHH
Q psy11075 46 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFLIQ 125 (195)
Q Consensus 46 y~t~~ei~~~l~~l~~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~~~ 125 (195)
|++|+||.++|++|+++||+++++.++|+|++||+|++++|++. +......||.|+++||+||+||+|++++++|++
T Consensus 1 Y~~y~ei~~~l~~l~~~~p~~~~l~~iG~S~eGR~i~~l~is~~---~~~~~~~kp~v~~~~~iH~~E~ig~~~~l~l~~ 77 (372)
T cd03868 1 YHHYEELTDLLHSLAKKYPNIARLHSIGRSVEGRELWVLRITDN---VNRREPGEPMFKYVGNMHGDETVGRQVLIYLAQ 77 (372)
T ss_pred CCCHHHHHHHHHHHHHHCCCcEEEEeccccCCCceEEEEEEecC---CCCCCCCCCeEEEECCcCCCcHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999984 223345799999999999999999999999999
Q ss_pred HHHHhcCCChHHHHhhccceEEEEeccCcccchhhhccCCCCCCCCCCCCCCccccCCCCCCcCCCc
Q psy11075 126 YLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAHGVDLNRNFPDQFEY 192 (195)
Q Consensus 126 ~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w~~ 192 (195)
.||.+|..|+.++++|++++|+|+|++||||+++.++++| ++.+..+|.||+||||||||+++|+.
T Consensus 78 ~L~~~y~~d~~~~~ll~~~~~~ivP~~NPDG~~~~~~~~~-~~~~~~~R~n~~GvDLNRnf~~~~~~ 143 (372)
T cd03868 78 YLLENYGGDERVTELVNTTDIYLMPSMNPDGFERSQEGDC-SCGGYGGRENANNVDLNRNFPDQFEG 143 (372)
T ss_pred HHHHhcccCHHHHHHHhCCEEEEEeeeCCchHHhhcccCc-cccCCCccCCCCCccCCCCCCcccCC
Confidence 9999998899999999999999999999999999988775 33445689999999999999999964
No 9
>cd06245 M14_CPD_III The third carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3.4.17.22), domain III. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally active a
Probab=100.00 E-value=9.5e-39 Score=273.67 Aligned_cols=140 Identities=37% Similarity=0.684 Sum_probs=128.0
Q ss_pred CCCCHHHHHHHHHHHHHHCCCcEEEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHHHH
Q psy11075 45 RYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFLI 124 (195)
Q Consensus 45 ~y~t~~ei~~~l~~l~~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~~ 124 (195)
+||+|+||.++|++|+++||+++++.++|+|+|||+|++++|++. ++...++||.|+++||+||+||+|++++++++
T Consensus 1 ~Yh~y~ei~~~l~~l~~~~p~i~~l~~IG~S~eGR~l~~l~Is~~---~~~~~~~kp~v~~~~giHg~E~ig~e~~l~l~ 77 (363)
T cd06245 1 RYHHYKELSEFLRGLTLNYPHITNLTSLGQSVEFRPILSLEISNK---PNNSEPEEPKIRFVAGIHGNAPVGTELLLALA 77 (363)
T ss_pred CCCCHHHHHHHHHHHHHHCCCceEEEEeeecCCCceEEEEEecCC---CCCCCCCCCEEEEECCccCCcHHHHHHHHHHH
Confidence 599999999999999999999999999999999999999999974 33344579999999999999999999999999
Q ss_pred HHHHHhcCCChHHHHhhccceEEEEeccCcccchhhhccCCCCCCCCCCCCCCccccCCCCCCcCC
Q psy11075 125 QYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAHGVDLNRNFPDQF 190 (195)
Q Consensus 125 ~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w 190 (195)
++||..|+.|+.++++|++++|+|+|++||||+++.+++++.+ ..+|.||+||||||||+++|
T Consensus 78 ~~L~~~y~~d~~v~~ll~~~~i~ivP~~NPDG~e~~~~~~~~~---~~~r~na~GvDLNRNf~~~~ 140 (363)
T cd06245 78 EFLCMNYGKNPAVTKLIDRTRIVIVPSLNPDGREKAQEKQCTS---KEGHTNAHGKDLDTDFTSNA 140 (363)
T ss_pred HHHHHHccCCHHHHHHHhCCEEEEEeccCCchHHHeecCCCcc---cCCCCCcccccCCCCCCccc
Confidence 9999999899999999999999999999999999988766422 24789999999999999986
No 10
>cd06248 M14_CPA_CPB_like Peptidase M14 Carboxypeptidase A/B-like subfamily: This is one of two main M14 carboxypeptidase subfamilies, defined by sequence and structural homology, the other being N/E. Carboxypeptidases (CPs) hydrolyze single, C-terminal amino acids from polypeptide chains. They have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Majority of the proteins in this subfamily have not been characterized as yet. The A/B enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; the proenzymes are called procarboxypeptidases. These enzymes exhibit distinct substrate specificity pattern; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. There are nine members in the A/B family: CPA1, CPA2, CPA3, CPA4, CPA5,
Probab=100.00 E-value=1.7e-38 Score=266.96 Aligned_cols=146 Identities=25% Similarity=0.378 Sum_probs=131.0
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCCcEEEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHH
Q psy11075 43 LQRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVF 122 (195)
Q Consensus 43 ~~~y~t~~ei~~~l~~l~~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~ 122 (195)
|+.|++|+|+.++|++|+++||+++++.++|+|+|||+|++++|++.. . ....||.|+++||+||+||+|++++++
T Consensus 1 ~~~Y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~I~~~~---~-~~~~k~~v~i~~giHarE~~~~~~~l~ 76 (304)
T cd06248 1 FDSYHPLEDHLQWLRDLQAAFPNNSELFTIGKSYEGRTILGLHIWGSG---G-EKGSKPAIVIHGTVHAREWISTMTVEY 76 (304)
T ss_pred CCccCCHHHHHHHHHHHHHHCCCceEEeceEECCCCCeEEEEEEecCC---C-CCCCCcEEEEECCcCcCccccHHHHHH
Confidence 678999999999999999999999999999999999999999999731 1 134689999999999999999999999
Q ss_pred HHHHHHHhcCCChHHHHhhccceEEEEeccCcccchhhhccCCCCCC--CCCCCCCCccccCCCCCCcCCCc
Q psy11075 123 LIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLD--GYVGRKNAHGVDLNRNFPDQFEY 192 (195)
Q Consensus 123 ~~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~--~~~~r~n~~GvDlNRnf~~~w~~ 192 (195)
++++|+.+|..|+.++++|++++|+|+|++||||+++.++.++.|++ ......+|.||||||||+++|+.
T Consensus 77 ~~~~L~~~~~~d~~~~~ll~~~~i~ivP~~NPDG~~~~~~~~~~wRknr~~~~~~~~~GVDLNRNf~~~w~~ 148 (304)
T cd06248 77 LAYQLLTGYGSDATVTALLDKFDFYIIPVVNPDGFVYTQTSDRLWRKNRQPTSGSSCVGTDLNRNWPYKWDG 148 (304)
T ss_pred HHHHHHHhhccCHHHHHHHHhCcEEEEeeecCchhhhhccchhhhhhcCCCCCCCCceeecCCCCCCCcccC
Confidence 99999999888999999999999999999999999999888876543 23334579999999999999974
No 11
>cd03869 M14_CPX_like Peptidase M14-like domain of carboxypeptidase (CP)-like protein X (CPX), CPX forms a distinct subgroup of the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Proteins belonging to this subgroup include CP-like protein X1 (CPX1), CP-like protein X2 (CPX2), and aortic CP-like protein (ACLP) and its isoform adipocyte enhancer binding protein-1 (AEBP1). AEBP1 is a truncated form of ACLP, which may arise from alternative splicing of the gene. These proteins are inactive towards standard CP substrates because they lack one or more critical active site and substrate-binding residues that are necessary for activity. They may function as binding proteins rather than as active CPs or display catalytic activity toward other substrates. Pro
Probab=100.00 E-value=2.9e-38 Score=272.26 Aligned_cols=146 Identities=34% Similarity=0.598 Sum_probs=129.3
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCcEEEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHHH
Q psy11075 44 QRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFL 123 (195)
Q Consensus 44 ~~y~t~~ei~~~l~~l~~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~ 123 (195)
..||+|+||.++|++|+++||+++++.+||+|+|||+|++++|++. ++.+..+||.|++.|++||+||+|+++++++
T Consensus 3 f~yh~y~em~~~L~~la~~yP~i~~l~sIGkS~EGR~L~~l~Is~~---~~~~~~~kP~v~~~g~iHgrE~ig~~~~l~l 79 (405)
T cd03869 3 FKHHNYKDMRQLMKVVNEMCPNITRIYNIGKSYQGLKLYAMEISDN---PGEHELGEPEFRYVAGMHGNEVLGRELLLLL 79 (405)
T ss_pred CccCCHHHHHHHHHHHHHHCCCceEEEEeEECcCCceEEEEEEecC---CccccCCCCeEEEEcccCCCcHHHHHHHHHH
Confidence 3579999999999999999999999999999999999999999973 3344457999999999999999999999999
Q ss_pred HHHHHHhc-CCChHHHHhhccceEEEEeccCcccchhhhccCCCCCCCCCCCCCCccccCCCCCC----cCCCc
Q psy11075 124 IQYLVLKD-GKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAHGVDLNRNFP----DQFEY 192 (195)
Q Consensus 124 ~~~L~~~~-~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~----~~w~~ 192 (195)
++.||.+| ..|+.++++|++++|+|+|++|||||+++.++.+..+.+..+|.||+||||||||| ++|+.
T Consensus 80 i~~L~~~y~~~d~~v~~Ll~~~~i~IvP~~NPDG~e~s~~~~~~~~~Wrk~R~na~GVDLNRNFp~~~~~~W~~ 153 (405)
T cd03869 80 MQFLCQEYLAGNPRVVHLVEETRIHLLPSMNPDGYEKAYEAGSELGGWALGRWTEEGIDINHNFPDLNTILWEA 153 (405)
T ss_pred HHHHHHhhhcCCHHHHHHHhcCeEEEEeeeCCchhhhhhhcCccccccccCccCCCCccccCCCcccccccccc
Confidence 99999998 57999999999999999999999999998876543223345789999999999999 47863
No 12
>cd03867 M14_CPZ Peptidase M14-like domain of carboxypeptidase (CP) Z (CPZ), CPZ belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPZ is a secreted Zn-dependent enzyme whose biological function is largely unknown. Unlike other members of the N/E subfamily, CPZ has a bipartite structure, which consists of an N-terminal cysteine-rich domain (CRD) whose sequence is similar to Wnt-binding proteins, and a C-terminal CP catalytic domain that removes C-terminal Arg residues from substrates. CPZ is enriched in the extracellular matrix and is widely distributed during early embryogenesis. That the CRD of CPZ can bind to Wnt4 suggests that CPZ plays a role in Wnt signaling.
Probab=100.00 E-value=4.3e-38 Score=272.72 Aligned_cols=143 Identities=36% Similarity=0.643 Sum_probs=128.8
Q ss_pred CCCHHHHHHHHHHHHHHCCCcEEEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHHHHH
Q psy11075 46 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFLIQ 125 (195)
Q Consensus 46 y~t~~ei~~~l~~l~~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~~~ 125 (195)
||+|+||.++|++|+++||+++++.++|+|+|||+|++++|++. ++.....||.|++.||+||+||+|++++++|++
T Consensus 1 y~~y~ei~~~l~~la~~~p~~~~~~~iG~S~EGR~i~~l~is~~---~~~~~~~kp~v~i~~giHg~E~ig~~~~~~l~~ 77 (395)
T cd03867 1 HHSYSQMVSVLKRTAARCSHIARTYSIGRSFEGRDLLVIEFSSN---PGQHELLEPEVKYIGNMHGNEVLGRELLIYLAQ 77 (395)
T ss_pred CCCHHHHHHHHHHHHHhCCCceEEEEccccCCCceEEEEEeccC---CCcccccCCeEEEEccccCCcHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999874 333345689999999999999999999999999
Q ss_pred HHHHhc-CCChHHHHhhccceEEEEeccCcccchhhhccCCCCCCCCCCCCCCccccCCCCCCcCCC
Q psy11075 126 YLVLKD-GKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAHGVDLNRNFPDQFE 191 (195)
Q Consensus 126 ~L~~~~-~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w~ 191 (195)
.||.+| ..|+.++++|++++|+|+|++||||+++..+.++....+..+|.||+||||||||++.|+
T Consensus 78 ~L~~~~~~~d~~v~~ll~~~~i~ivP~~NPDG~e~~~~~~~~~~~wr~~R~n~~GvDLNRNf~~~~~ 144 (395)
T cd03867 78 FLCSEYLLGNQRIQTLINTTRIHLLPSMNPDGYEAAASEGAGYNGWTNGRQNAQNIDLNRNFPDLTS 144 (395)
T ss_pred HHHHhhhcCCHHHHHHhhCcEEEEEeccCCchHHhhhhcCccccccccCCcCCCCcccccCCCcchh
Confidence 999987 578999999999999999999999999998776532334468999999999999999985
No 13
>cd03866 M14_CPM Peptidase M14 Carboxypeptidase (CP) M (CPM) belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPM is an extracellular glycoprotein, bound to cell membranes via a glycosyl-phosphatidylinositol on the C-terminus of the protein. It specifically removes C-terminal basic residues such as lysine and arginine from peptides and proteins. The highest levels of CPM have been found in human lung and placenta, but significant amounts are present in kidney, blood vessels, intestine, brain, and peripheral nerves. CPM has also been found in soluble form in various body fluids, including amniotic fluid, seminal plasma and urine. Due to its wide distribution in a variety of tissues, it is believed that it plays an important role in the cont
Probab=100.00 E-value=3e-38 Score=271.88 Aligned_cols=142 Identities=49% Similarity=0.832 Sum_probs=128.8
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCcEEEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHHH
Q psy11075 44 QRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFL 123 (195)
Q Consensus 44 ~~y~t~~ei~~~l~~l~~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~ 123 (195)
..|++|+||.++|++|+++||+++++.++|+|+|||+|++++|++. ++.....||.|+++|++||+||+|+++++++
T Consensus 3 ~~Y~~~~ei~~~l~~l~~~~p~i~~l~~IG~S~eGR~i~~l~ig~~---~~~~~~~~P~v~~~~~iHg~E~ig~~~~l~l 79 (376)
T cd03866 3 FNYHNTEQMEAYLKDVNKNYPSITHLHSIGQSVEGRELWVLVLGRF---PREHRIGIPEFKYVANMHGNEVVGRELLLHL 79 (376)
T ss_pred cccCCHHHHHHHHHHHHHhCCCcEEEEEeeccCCCceEEEEEeccC---CccccCCCCeEEEEcccCCCcHHHHHHHHHH
Confidence 5799999999999999999999999999999999999999999974 2333457899999999999999999999999
Q ss_pred HHHHHHhcCCChHHHHhhccceEEEEeccCcccchhhhccCCCCCCCCCCCCCCccccCCCCCCcCCCc
Q psy11075 124 IQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAHGVDLNRNFPDQFEY 192 (195)
Q Consensus 124 ~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w~~ 192 (195)
++.||.+|..|+.++++|++++|+|+|++||||+++.. .+|.|+ .+|.||+||||||||+++|+.
T Consensus 80 ~~~L~~~y~~d~~i~~lL~~~~i~ivP~~NPDG~e~~~-~~~~~~---~~R~N~~GvDLNRnf~~~w~~ 144 (376)
T cd03866 80 IDYLVTSYGSDPVITRLLNSTRIHIMPSMNPDGFEASK-PDCYYS---VGRYNKNGYDLNRNFPDAFEE 144 (376)
T ss_pred HHHHHHhcCCCHHHHHHHhCCEEEEEeccCCchhhhcc-cccccc---cccccCCCcccCcCchhhhcc
Confidence 99999999889999999999999999999999999984 455443 489999999999999999954
No 14
>cd03859 M14_CPT Peptidase M14-like domain of carboxypeptidase (CP) T (CPT), CPT belongs to the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPT has moderate similarity to CPA and CPB, and exhibits dual-substrate specificity by cleaving C-terminal hydrophobic amino acid residues like CPA and C-terminal positively charged residues like CPB. CPA and CPB are M14 family peptidases but do not belong to this CPT group. The substrate specificity difference between CPT and CPA and CPB is ascribed to a few amino acid substitutions at the substrate-binding pocket while the spatial organization of the binding site remains the same as in all Zn-CPs. CPT has increased thermal stability in presence of Ca2+ ions, and two disulfide bridges which give an additional stabilization factor.
Probab=100.00 E-value=1.5e-37 Score=260.55 Aligned_cols=145 Identities=31% Similarity=0.569 Sum_probs=128.5
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCcEEEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHHH
Q psy11075 44 QRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFL 123 (195)
Q Consensus 44 ~~y~t~~ei~~~l~~l~~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~ 123 (195)
..|+||+||.++|++|+++||+++++.++|+|++||+|++++|++.+ .....||+|+|+|++||+|++|+++++++
T Consensus 2 ~~y~~y~ei~~~l~~l~~~~p~~v~~~~iG~S~eGR~i~~l~i~~~~----~~~~~kp~i~i~~~iH~~E~~g~~~~l~~ 77 (295)
T cd03859 2 RGYHNYLEMVDELNAAAAAYPNLTKVKSIGKSYEGRDIIAVKISDNV----ATDENKPEVLYTSTHHAREWLSLEMAIYL 77 (295)
T ss_pred CCCCCHHHHHHHHHHHHHHCCCceEEEeeeecCCCCeEEEEEEecCC----CCCCCCCEEEEECCcCccchhhHHHHHHH
Confidence 57999999999999999999999999999999999999999999842 12346899999999999999999999999
Q ss_pred HHHHHHhcCCChHHHHhhccceEEEEeccCcccchhhhc--cCCCCCCC--CC--CCCCCccccCCCCCCcCCCc
Q psy11075 124 IQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKE--GKCDSLDG--YV--GRKNAHGVDLNRNFPDQFEY 192 (195)
Q Consensus 124 ~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~--~~~~~~~~--~~--~r~n~~GvDlNRnf~~~w~~ 192 (195)
++.|+.++..|+.++++|++++|+|||++||||+++.++ .++.|+.. .. .+.||+||||||||+++|+.
T Consensus 78 i~~L~~~~~~d~~~~~lL~~~~i~ivP~~NPDG~~~~~~~~~~~~wrkn~~~~~~~~~~~~GvDLNRNf~~~w~~ 152 (295)
T cd03859 78 MHYLLENYGKDPRIQNLVDNRELWFVPVVNPDGYEYDETTGGYRSWRKNRRDNSGDISSSDGVDLNRNYGYKWGY 152 (295)
T ss_pred HHHHHHhhccCHHHHHHHhcCeEEEEeeeCCCcceEEeeccCccceeccCCCCCCCcCcceeecCCCCCCcccCC
Confidence 999999987899999999999999999999999999987 45444322 11 14689999999999999986
No 15
>cd03865 M14_CPE_H Peptidase M14 Carboxypeptidase (CP) E (CPE, also known as carboxypeptidase H, and enkephalin convertase; EC 3.4.17.10) belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPE is an important enzyme responsible for the proteolytic processing of prohormone intermediates (such as pro-insulin, pro-opiomelanocortin, or pro-gonadotropin-releasing hormone) by specifically removing C-terminal basic residues. In addition, it has been proposed that the regulated secretory pathway (RSP) of the nervous and endocrine systems utilizes membrane-bound CPE as a sorting receptor. A naturally occurring point mutation in CPE reduces the stability of the enzyme and causes its degradation, leading to an accumulation of numerous neuroendocrine pe
Probab=100.00 E-value=3.5e-37 Score=265.59 Aligned_cols=143 Identities=41% Similarity=0.700 Sum_probs=126.9
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCcEEEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHHH
Q psy11075 44 QRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFL 123 (195)
Q Consensus 44 ~~y~t~~ei~~~l~~l~~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~ 123 (195)
..||+|+||.++|++|+++||+++++.++|+|+|||+|++++|++. ++.+.++||.|+++|++||+||+|.++++++
T Consensus 3 f~Yh~y~e~~~~L~~l~~~~p~i~~l~~IG~S~eGR~I~~l~Is~~---~~~~~~~kP~v~i~g~iHg~E~ig~~~~l~l 79 (402)
T cd03865 3 FEYHRYPELREALVSVWLQCPSISRIYTVGRSFEGRELLVIEMSDN---PGEHEPGEPEFKYIGNMHGNEAVGRELLIYL 79 (402)
T ss_pred cccCCHHHHHHHHHHHHHHCCCceEEEecccccCCCeEEEEEeecC---CCCCCCCCCEEEEECCcCCCcHHHHHHHHHH
Confidence 4799999999999999999999999999999999999999999973 3444567999999999999999999999999
Q ss_pred HHHHHHhcC-CChHHHHhhccceEEEEeccCcccchhhhccCCCCCCCCCCCCCCccccCCCCCCcC
Q psy11075 124 IQYLVLKDG-KDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAHGVDLNRNFPDQ 189 (195)
Q Consensus 124 ~~~L~~~~~-~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~ 189 (195)
+++||.+|. .|+.+++||++++|+|+|++||||+++..+..+..+.+..+|.||+|||||||||.+
T Consensus 80 ~~~L~~~y~~~d~~v~~LLd~~~i~IvP~~NPDG~e~~~~~~~~~~~w~~~R~Na~GvDLNRNFp~~ 146 (402)
T cd03865 80 AQYLCNEYQKGNETIINLIHSTRIHIMPSLNPDGFEKAASQPGELKDWFVGRSNAQGIDLNRNFPDL 146 (402)
T ss_pred HHHHHHhcccCCHHHHHHHhcCEEEEEeeeCCchHHhhhhcCccccchhhhcccccCcccCCCCCcc
Confidence 999999984 589999999999999999999999998765432222234579999999999999975
No 16
>cd06905 Peptidase_M14-like_8 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe
Probab=100.00 E-value=6.5e-37 Score=261.47 Aligned_cols=122 Identities=36% Similarity=0.615 Sum_probs=111.4
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCCcEEEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHH
Q psy11075 43 LQRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVF 122 (195)
Q Consensus 43 ~~~y~t~~ei~~~l~~l~~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~ 122 (195)
|..|++|+||.++|++|+++||+++++.++|+|+|||+|++++|++.. ......||.|+|.||+||+||+|++++++
T Consensus 1 ~~~Y~ty~ei~~~L~~La~~~P~lv~l~~IG~S~EGR~I~~l~Is~~~---~~~~~~Kp~I~i~~giHarEwig~~~~l~ 77 (360)
T cd06905 1 FSRYYRYDELTAALQAWASAYPQLCSLESIGKSYEGRDIWLLTLTNQA---TGPDREKPAFWIDANIHATEVTGSAVALY 77 (360)
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCceEEEEeeecCCCCceEEEEecCCC---CCCCCCCcEEEEecCCCCCchHHHHHHHH
Confidence 578999999999999999999999999999999999999999998742 12235799999999999999999999999
Q ss_pred HHHHHHHhcCCChHHHHhhccceEEEEeccCcccchhhhc-cCCCC
Q psy11075 123 LIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKE-GKCDS 167 (195)
Q Consensus 123 ~~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~-~~~~~ 167 (195)
+++.|+.+|..++.++++|++++|+|||++||||++++.+ +++.|
T Consensus 78 li~~Ll~~y~~d~~i~~lLd~~~~~IvP~vNPDG~e~~~~~~~r~w 123 (360)
T cd06905 78 VIQTLLNGYGSDPEVTRLLDGYTFYILPRLNPDGAEQALTHPPYVR 123 (360)
T ss_pred HHHHHHHhccCCHHHHHHHhcCeEEEEeeeCCChheEEeecccccc
Confidence 9999999988899999999999999999999999999887 55543
No 17
>cd03864 M14_CPN Peptidase M14 Carboxypeptidase N (CPN, also known as kininase I, creatine kinase conversion factor, plasma carboxypeptidase B, arginine carboxypeptidase, and protaminase; EC 3.4.17.3) is an extracellular glycoprotein synthesized in the liver and released into the blood, where it is present in high concentrations. CPN belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPN plays an important role in protecting the body from excessive buildup of potentially deleterious peptides that normally act as local autocrine or paracrine hormones. It specifically removes C-terminal basic residues. As CPN can cleave lysine more avidly than arginine residues it is also called lysine carboxypeptidase. CPN substrates inclu
Probab=100.00 E-value=6.7e-37 Score=264.14 Aligned_cols=142 Identities=39% Similarity=0.644 Sum_probs=127.5
Q ss_pred CCCHHHHHHHHHHHHHHCCCcEEEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHHHHH
Q psy11075 46 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFLIQ 125 (195)
Q Consensus 46 y~t~~ei~~~l~~l~~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~~~ 125 (195)
||+|++|.++|++|+++||+++++.+||+|++||+|++++|++. ++.+...||.|+++|++||+|++|.++++++++
T Consensus 1 ~h~y~em~~~L~~l~~~yP~i~~l~sIG~SveGR~i~~l~is~~---~~~~~~~kp~v~~~g~iHg~E~ig~e~ll~l~~ 77 (392)
T cd03864 1 HHRYDDLVRALYAVQNECPYITRIYSIGRSVEGRHLYVLEFSDN---PGIHEPLEPEFKYVGNMHGNEVLGRELLIQLSE 77 (392)
T ss_pred CCCHHHHHHHHHHHHHHCCCeEEEEEeeeccCCceEEEEEecCC---CccccCCCCEEEEEcccCCCcHHHHHHHHHHHH
Confidence 79999999999999999999999999999999999999999983 333455789999999999999999999999999
Q ss_pred HHHHhcC-CChHHHHhhccceEEEEeccCcccchhhhccCCCCCCCCCCCCCCccccCCCCCCcCC
Q psy11075 126 YLVLKDG-KDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAHGVDLNRNFPDQF 190 (195)
Q Consensus 126 ~L~~~~~-~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w 190 (195)
.||.+|. +|+.++++|++++|+|+|++||||+++..++.+..+....+|.|++|||||||||..|
T Consensus 78 ~L~~~y~~~d~~v~~lL~~~~i~ivP~~NPDG~e~~~~~~~~~~~~~~~R~Na~GVDLNRNFp~~~ 143 (392)
T cd03864 78 FLCEEYRNGNERITRLIQDTRIHILPSMNPDGYEVAARQGPEFNGYLVGRNNANGVDLNRNFPDLN 143 (392)
T ss_pred HHHHhcccCCHHHHHHHhcCeEEEEeeeCCchHHhhhccCCCcCccccccccccCcccccCCCccc
Confidence 9999984 5899999999999999999999999998765544333446899999999999999765
No 18
>cd03858 M14_CP_N-E_like Carboxypeptidase (CP) N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. The N/E subfamily includes eight members, of which five (CPN, CPE, CPM, CPD, CPZ) are considered enzymatically active, while the other three are non-active (CPX1, PCX2, ACLP/AEBP1) and lack the critical active site and substrate-binding residues considered necessary for CP activity. These non-active members may function as binding proteins or display catalytic activity towards other substrates. Unlike the A/B CP subfamily, enzymes belonging to the N/E subfamily are not produced as inactive precursors that require proteolysis to produce the active form; rather, they rely on their substrate specificity and subcellular compartmentalization to prevent inappr
Probab=100.00 E-value=7.2e-37 Score=264.01 Aligned_cols=141 Identities=52% Similarity=0.888 Sum_probs=129.6
Q ss_pred CCCHHHHHHHHHHHHHHCCCcEEEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHHHHH
Q psy11075 46 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFLIQ 125 (195)
Q Consensus 46 y~t~~ei~~~l~~l~~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~~~ 125 (195)
|++|+||.++|++|+++||+++++.++|+|++||+|++++|++. +......||.|+|+||+||+|++|++++++|++
T Consensus 1 Y~~y~ei~~~l~~l~~~~p~~~~~~~iG~S~eGR~i~~l~i~~~---~~~~~~~kp~v~i~agiH~~E~~g~~~~~~l~~ 77 (374)
T cd03858 1 YHNYAELESFLKEVAANYPNITRLYSIGKSVQGRDLWVLEISDN---PGVHEPGEPEFKYVGNMHGNEVVGRELLLRLAQ 77 (374)
T ss_pred CCCHHHHHHHHHHHHHhCCCceEEEEcccCCCCCEEEEEEEecC---CCCCCCCCceEEEeccccCCchhHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999984 222234789999999999999999999999999
Q ss_pred HHHHhcC-CChHHHHhhccceEEEEeccCcccchhhhccCCCCCCCCCCCCCCccccCCCCCCcCCCc
Q psy11075 126 YLVLKDG-KDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAHGVDLNRNFPDQFEY 192 (195)
Q Consensus 126 ~L~~~~~-~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w~~ 192 (195)
.|+.+|. +|+.++++|++++|+|+|++||||+++.++++|.|+ .+|.|++||||||||++.|..
T Consensus 78 ~L~~~~~~~d~~~~~ll~~~~~~ivP~~NPDG~~~~~~~~~~w~---~~R~n~~GvDLNRnf~~~~~~ 142 (374)
T cd03858 78 YLCENYGAGDPRITRLVDNTRIHIMPSMNPDGYEKAAEGDCGGL---TGRYNANGVDLNRNFPDLFFT 142 (374)
T ss_pred HHHHHhccCCHHHHHHHhCCEEEEEcccCCchhhhhcccCCccc---ccCCCCcceecccCCCccccc
Confidence 9999886 899999999999999999999999999988887664 378999999999999999964
No 19
>smart00631 Zn_pept Zn_pept.
Probab=100.00 E-value=4.2e-36 Score=249.76 Aligned_cols=141 Identities=40% Similarity=0.653 Sum_probs=126.8
Q ss_pred CCCHHHHHHHHHHHHHHCCCcEEEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHHHHH
Q psy11075 46 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFLIQ 125 (195)
Q Consensus 46 y~t~~ei~~~l~~l~~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~~~ 125 (195)
|+||+|+.++|++|+++||+++++..+|+|.+||+|++++|++.. ...||.|+|+|++||+|+.|+++++.+++
T Consensus 1 y~ty~e~~~~l~~l~~~~~~~v~~~~iG~S~~Gr~i~~~~i~~~~------~~~k~~v~i~a~~Hg~E~~g~~~~~~~i~ 74 (277)
T smart00631 1 YHSYEEIEAWLKELAARYPDLVRLVSIGKSVEGRPIWVLKISDGG------SHNKPAIFIDAGIHAREWIGPATALYLIN 74 (277)
T ss_pred CCCHHHHHHHHHHHHHHCCCceEEEeceecCCCCceEEEEEeCCC------CCCCcEEEEECCccccccccHHHHHHHHH
Confidence 799999999999999999999999999999999999999999841 23589999999999999999999999999
Q ss_pred HHHHhcCCChHHHHhhccceEEEEeccCcccchhhhccCCCCCCCCCCCCCCccccCCCCCCcCCCc
Q psy11075 126 YLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAHGVDLNRNFPDQFEY 192 (195)
Q Consensus 126 ~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w~~ 192 (195)
.|+.++..|+.++.+|++++|+|||++||||+++.+.+++.|+.......|++||||||||++.|+.
T Consensus 75 ~L~~~~~~~~~~~~ll~~~~i~ivP~~NPDG~~~~~~~~~~wr~~r~~~~~~~GvDLNRnf~~~w~~ 141 (277)
T smart00631 75 QLLENYGRDPRITKLLDKTDIYIVPVLNPDGYEYTHTGDRLWRKNRSPNSNCRGVDLNRNFPFHWGK 141 (277)
T ss_pred HHHHhcccCHHHHHHHHcCcEEEEEeecCchhhheecccccccCCCCCCCCCcCcccCCCCCCCCCC
Confidence 9999887789999999999999999999999999888777654422222489999999999999965
No 20
>cd06227 Peptidase_M14-like_2 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe
Probab=100.00 E-value=1.1e-35 Score=245.77 Aligned_cols=137 Identities=25% Similarity=0.350 Sum_probs=123.2
Q ss_pred CCC-HHHHHHHHHHHHHHCCCcEEEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHHHH
Q psy11075 46 YYN-STELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFLI 124 (195)
Q Consensus 46 y~t-~~ei~~~l~~l~~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~~ 124 (195)
||+ ++||.++|++|+++||+ ++...+|+|++||+|+++++++. .+. ...|+.|+|.||+||+||+|++++++|+
T Consensus 2 Yh~~~~ei~~~l~~l~~~~p~-~~~~~ig~S~egr~i~~i~~~~~---~~~-~~~k~~i~i~agiHarE~i~~~~~l~li 76 (272)
T cd06227 2 YHTATDEINEEADALVKNIRL-SRLGELIESVKVRNFSSITLNPN---GDP-SKKKVKALLLFGEHARELISPETGLHLL 76 (272)
T ss_pred ccCCHHHHHHHHHHHHHHCCC-cEEeeeeeccCCceeeEEEecCC---CCC-CCCCCEEEEECCccCCchhhHHHHHHHH
Confidence 899 99999999999999999 89999999999999999999973 111 1468999999999999999999999999
Q ss_pred HHHHHhcCC----ChHHHHhhccceEEEEeccCcccchhhhccCCCCCCCCCCCCCCccccCCCCCCcCCCcc
Q psy11075 125 QYLVLKDGK----DDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAHGVDLNRNFPDQFEYE 193 (195)
Q Consensus 125 ~~L~~~~~~----d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w~~~ 193 (195)
++|+.++.. ++.++++|++++|+|||++||||+++.+++++ .+|+|++||||||||++.|+.+
T Consensus 77 ~~L~~~~~~~~~~~~~~~~lL~~~~i~ivP~~NPDG~~~~~~~~~------~wR~N~~GVDLNRNf~~~w~~~ 143 (272)
T cd06227 77 SNLCGELAETFDWGDLLKNILDNFDLKIIPNENPDGRKKVESGNY------CLRENENGVDLNRNYGADWGFK 143 (272)
T ss_pred HHHHHhcccccchhHHHHHHHhcCcEEEEeccCCchheeEeccCc------ccccCCccccccccCCcccccC
Confidence 999998743 37899999999999999999999999877765 3899999999999999999754
No 21
>cd03860 M14_CP_A-B_like The Peptidase M14 Carboxypeptidase (CP) A/B subfamily is one of two main M14 CP subfamilies defined by sequence and structural homology, the other being the N/E subfamily. CPs hydrolyze single, C-terminal amino acids from polypeptide chains. They have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. There are nine members in the A/B family: CPA1, CPA2, CPA3, CPA4, CPA5, CPA6, CPB, CPO and CPU. CPA1, CPA2 and CPB are produced by the
Probab=100.00 E-value=1.6e-35 Score=248.13 Aligned_cols=139 Identities=32% Similarity=0.441 Sum_probs=124.7
Q ss_pred CCCHHHHHHHHHHHHHHCCCcEEEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHHHHH
Q psy11075 46 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFLIQ 125 (195)
Q Consensus 46 y~t~~ei~~~l~~l~~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~~~ 125 (195)
|+||+||.++|++|+++||+++++.++|+|.+||+|++++|++.+ ...||.|+|+|++||+|++|+++++++++
T Consensus 1 Y~ty~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~l~i~~~~------~~~k~~v~i~~~~Hg~E~~g~~~~~~~~~ 74 (294)
T cd03860 1 YHTYDEIYAWLDELAQKYPDLVTVETIGRSYEGRPIKGVKISNGG------RSNKPAIFIDAGIHAREWISPATALYIIN 74 (294)
T ss_pred CCCHHHHHHHHHHHHHHCCCceEEEeeeeCCCCCeEEEEEEecCC------CCCCcEEEEECCcCcCccccHHHHHHHHH
Confidence 899999999999999999999999999999999999999999841 34689999999999999999999999999
Q ss_pred HHHHhcCCChHHHHhhccceEEEEeccCcccchhhhccCCCCCC--CCCCCCCCccccCCCCCCcCCCc
Q psy11075 126 YLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLD--GYVGRKNAHGVDLNRNFPDQFEY 192 (195)
Q Consensus 126 ~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~--~~~~r~n~~GvDlNRnf~~~w~~ 192 (195)
.|+.++. +.++.+|++++|+|||++||||+++.++.++.|++ ....+.+|+||||||||++.|+.
T Consensus 75 ~L~~~~~--~~~~~ll~~~~i~iiP~~NPDG~~~~~~~~~~wrknr~~~~~~~~~GvDLNRnf~~~w~~ 141 (294)
T cd03860 75 QLVESYD--PEVTDLLDNYDWYILPVANPDGYEYTHTTDRLWRKNRSPNSGGGCVGVDLNRNFDYHWGG 141 (294)
T ss_pred HHHHccC--HHHHHHHHcCeEEEEeeecCCchhhhccccchhcccCCCCCCCCceeeccCCCCCCCCcc
Confidence 9998643 68899999999999999999999998887776543 23335779999999999999975
No 22
>PF00246 Peptidase_M14: Zinc carboxypeptidase This is family M14 in the peptidase classification. ; InterPro: IPR000834 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of sequences contain a diverse range of gene families, which include metallopeptidases belonging to MEROPS peptidase family M14 (carboxypeptidase A, clan MC), subfamilies M14A and M14B. The carboxypeptidase A family can be divided into two subfamilies: carboxypeptidase H (regulatory) and carboxypeptidase A (digestive) []. Members of the H family have longer C-termini than those of family A [], and carboxypeptidase M (a member of the H family) is bound to the membrane by a glycosylphosphatidylinositol anchor, unlike the majority of the M14 family, which are soluble []. The zinc ligands have been determined as two histidines and a glutamate, and the catalytic residue has been identified as a C-terminal glutamate, but these do not form the characteristic metalloprotease HEXXH motif [, ]. Members of the carboxypeptidase A family are synthesised as inactive molecules with propeptides that must be cleaved to activate the enzyme. Structural studies of carboxypeptidases A and B reveal the propeptide to exist as a globular domain, followed by an extended alpha-helix; this shields the catalytic site, without specifically binding to it, while the substrate-binding site is blocked by making specific contacts [, ]. Other examples of protein families in this entry include: Intron maturase Putative mitochondrial processing peptidase alpha subunit Superoxide dismutase [Mn] (1.15.1.1 from EC) Asparagine synthetase [glutamine-hydrolysing] 3 (6.3.5.4 from EC) Glucose-6-phosphate isomerase (5.3.1.9 from EC) ; GO: 0004181 metallocarboxypeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 3DGV_A 3OSL_C 3D4U_A 2NSM_A 1QMU_A 1H8L_A 2PJ2_A 2PJ9_A 1ZG8_A 1Z5R_A ....
Probab=100.00 E-value=9.7e-34 Score=235.51 Aligned_cols=134 Identities=37% Similarity=0.673 Sum_probs=114.4
Q ss_pred HHHHHHHHHHHCCCcEEEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHHHHHHHHHhc
Q psy11075 52 LDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFLIQYLVLKD 131 (195)
Q Consensus 52 i~~~l~~l~~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~~~~L~~~~ 131 (195)
|.++|++|+++||+++++.++|+|.+||+|++++|++.. ......||.|+|+||+||+|+.|+++++.+++.|+..|
T Consensus 1 i~~~l~~l~~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~---~~~~~~k~~v~i~~~~Hg~E~~g~~~~l~~~~~L~~~~ 77 (279)
T PF00246_consen 1 INAYLDALAARYPDIVRLESIGKSYEGRPIYALTIGSNS---NGSDPGKPTVLIIAGIHGNEWIGSEALLYLIEELLSGY 77 (279)
T ss_dssp HHHHHHHHHHHSTTTEEEEEEEE-TTS-EEEEEEESSST---TTTSTTSEEEEEEE-SSTT-THHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHCCCcEEEEEeeECCCCCeEEEEEeeccc---ccccccccceEEEecccccccCchHHHHHHHHHhhccc
Confidence 678999999999999999999999999999999999842 23456899999999999999999999999999999987
Q ss_pred CCChHHHHhhccceEEEEeccCcccchhhhccCCCCCCCCCCCCCCccccCCCCCCcCCCc
Q psy11075 132 GKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAHGVDLNRNFPDQFEY 192 (195)
Q Consensus 132 ~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w~~ 192 (195)
+++.++.+|++++|+|||++||||+++.+..++.|.. .|.|++||||||||+..|+.
T Consensus 78 -~~~~~~~ll~~~~i~iiP~~NPDG~~~~~~~~~~w~~---~R~n~~GvDlNRnf~~~w~~ 134 (279)
T PF00246_consen 78 -DDPEVKELLDNVVIYIIPMVNPDGYEYGTSGDRGWRK---NRSNANGVDLNRNFPYQWNE 134 (279)
T ss_dssp -TSHHHHHHHHHEEEEEES-SSHHHHHHHHHT-TTCCS---TSSBTTS--GGGSSSSSTTS
T ss_pred -cchhhhhhcccceEEEEeeecccceeeeeeccccccc---ccccccccccccccCccccc
Confidence 8899999999999999999999999999887765544 59999999999999999944
No 23
>cd06226 M14_CPT_like Peptidase M14-like domain of an uncharacterized group of Peptidase M14 Carboxypeptidase (CP) T (CPT)-like proteins. This group belongs to the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPT exhibits dual-substrate specificity by cleaving C-terminal hydrophobic amino acid residues and C-terminal positively charged residues. However, CPT does not belong to this CPT-like group.
Probab=100.00 E-value=4.6e-33 Score=232.34 Aligned_cols=129 Identities=29% Similarity=0.398 Sum_probs=109.9
Q ss_pred CCCcEEEEEccccC------CCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHHHHHHHHHhcCCChH
Q psy11075 63 YPHLVRAETIGKSV------QGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDR 136 (195)
Q Consensus 63 ~p~~v~~~~iG~S~------~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~~~~L~~~~~~d~~ 136 (195)
||+++++.+||+|+ +||+|++++|++.... .....||.|+|.|++||+||+|+++++++++.|+..|..|+.
T Consensus 1 ~p~~~~~~~iG~S~~~~~~~eGR~I~~l~ig~~~~~--~~~~~kp~v~i~~~iHarE~ig~~~~l~~i~~L~~~~~~d~~ 78 (293)
T cd06226 1 YPNLAQWVDIGDSWDKPGGPAGYDIRALKLTNKATN--SPTGPKPVFFIMGAIHAREYTTAELVLRFAEDLLEGYGTDAD 78 (293)
T ss_pred CCcceEEEEeeEecccCcccCCceEEEEEEecCCCC--cCCCCCCEEEEECCcCCCcHHHHHHHHHHHHHHHHhcccCHH
Confidence 69999999999999 9999999999984211 134579999999999999999999999999999999888999
Q ss_pred HHHhhccceEEEEeccCcccchhhhccC-CCCCCC----CCCCCCCccccCCCCCCcCCCcc
Q psy11075 137 ITKLLNSTDIYIVPSINPDGFAAAKEGK-CDSLDG----YVGRKNAHGVDLNRNFPDQFEYE 193 (195)
Q Consensus 137 ~~~ll~~~~l~iiP~~NPDG~~~~~~~~-~~~~~~----~~~r~n~~GvDlNRnf~~~w~~~ 193 (195)
++++|++++|+|||++||||+++++++. +++++. ..++.|++||||||||+++|+..
T Consensus 79 v~~lL~~~~i~ivP~~NPDG~~~~~~~~~wRkNr~~~~~~~~~~n~~GVDLNRNf~~~w~~~ 140 (293)
T cd06226 79 ATWLLDYHEIHVVPIVNPDGRKIAEQGLSQRKNANTSGGSNCSGSSYGVDLNRNYSFGWGGA 140 (293)
T ss_pred HHHHHhcCeEEEEecccCCcceeeccCcceeccCCCCCCCCccccccccccccCCCCcCCcC
Confidence 9999999999999999999999887632 222221 12567789999999999999753
No 24
>cd06242 Peptidase_M14-like_1_5 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th
Probab=99.98 E-value=8.7e-32 Score=222.43 Aligned_cols=132 Identities=24% Similarity=0.311 Sum_probs=116.4
Q ss_pred CCCHHHHHHHHHHHHHHCCCcEEEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHHHHH
Q psy11075 46 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFLIQ 125 (195)
Q Consensus 46 y~t~~ei~~~l~~l~~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~~~ 125 (195)
+.+|+|+.++|++|++++|.+.++.++|+|.|||+|++++|++..+. .....||.|+|.||+||+|+.|+++++.+++
T Consensus 2 ~t~y~e~~~~l~~La~~~~~i~~~~~iG~S~eGR~i~~l~is~~~~~--~~~~~kp~V~i~~giHg~E~~g~~a~l~ll~ 79 (268)
T cd06242 2 PTSHEEMESFMKSLASKNDWMSYHSDIGKSEEGRSIPYVYLSTSKSS--SSSSKKLRVWLQGGVHGNEPAGDEAALALLG 79 (268)
T ss_pred CCCHHHHHHHHHHHHHHCCCeEEEEECccccCCceeEEEEEecCCcc--ccCCCCCEEEEECCcCCCCHHHHHHHHHHHH
Confidence 67999999999999999999766999999999999999999984211 1245789999999999999999999999999
Q ss_pred HHHHhcCCChHHHHhhccceEEEEeccCcccchhhhccCCCCCCCCCCCCCCccccCCCCCCcCCCcccC
Q psy11075 126 YLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAHGVDLNRNFPDQFEYEAK 195 (195)
Q Consensus 126 ~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w~~~~~ 195 (195)
+|+.+ +...++|++++|+|+|++||||+++. +|.||.|+||||||...-++|+|
T Consensus 80 ~L~~~----~~~~~lL~~~~i~ivP~~NPDG~~~~------------~R~na~g~DlNRD~~~~~~pEtr 133 (268)
T cd06242 80 KLDNN----PKWASVLEKIDIIVLPRYNPDGSAYF------------QRTLATGYDPNRDHTKLARQQTR 133 (268)
T ss_pred HHHhC----chHHHHHhcCeEEEEeccCcchhhhc------------cccCCcCcccCCCCCcccCHHHH
Confidence 99874 23458999999999999999999986 69999999999999988777764
No 25
>cd06237 M14_Nna1_like_3 A bacterial subgroup of the Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP),-like proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins (such as alpha-tubulin in eukaryotes) to remove a C-terminal tyrosine. Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal domain might act as a folding domain.
Probab=99.97 E-value=1.4e-31 Score=218.42 Aligned_cols=128 Identities=27% Similarity=0.410 Sum_probs=114.9
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCcEEEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHHH
Q psy11075 44 QRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFL 123 (195)
Q Consensus 44 ~~y~t~~ei~~~l~~l~~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~ 123 (195)
+.-.+++++.+++++|++. +.+++.++|+|++||||+++++++. ..||.|++.|++||+|++|+++++.|
T Consensus 5 ~~~~~~~~i~~~l~~L~~~--~~v~~~~iG~S~eGR~i~~l~ig~~--------~~k~~v~i~~~iH~~E~~g~~~~~~~ 74 (244)
T cd06237 5 QELIDNQDVKDWVDSLIKQ--PFVELELLGLSTQGRPLKALERGNP--------DSKEWIVVISRQHPPEVTGALAMKAF 74 (244)
T ss_pred eeeCCHHHHHHHHHHHhcC--CCeEEEEeeEcCCCCEEEEEEecCC--------CCCceEEEEcCcCCCcHHHHHHHHHH
Confidence 3457899999999999765 6799999999999999999999863 35799999999999999999999999
Q ss_pred HHHHHHhcCCChHHHHhhccceEEEEeccCcccchhhhccCCCCCCCCCCCCCCccccCCCCCCcCCCcccC
Q psy11075 124 IQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAHGVDLNRNFPDQFEYEAK 195 (195)
Q Consensus 124 ~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w~~~~~ 195 (195)
++.|+. +++.++.+|++++|+|+|++||||+++. .+|+|++||||||||....++|+|
T Consensus 75 ~~~l~~---~~~~~~~ll~~~~i~ivP~~NPDG~~~~-----------~wR~N~~GvDLNRnw~~~sepEt~ 132 (244)
T cd06237 75 IETLLS---DSELAKKFRAKYNVLLVPNMNPDGVDLG-----------HWRHNANGIDLNRDWSNFNQPETR 132 (244)
T ss_pred HHHHHh---CCHHHHHHHHhCEEEEEEeeCcchhhcC-----------CccCCCCCcCCCCCCCCCCCHHHH
Confidence 999986 4456799999999999999999999975 379999999999999998888875
No 26
>cd06234 M14_Nna1_like_1 A bacterial subgroup of the Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP)-like proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins (such as alpha-tubulin in eukaryotes) to remove a C-terminal tyrosine. Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal domain might act as a folding domain.
Probab=99.97 E-value=9.7e-31 Score=215.13 Aligned_cols=127 Identities=29% Similarity=0.357 Sum_probs=114.4
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCCcEEEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHH
Q psy11075 40 GIDLQRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYAL 119 (195)
Q Consensus 40 ~~~~~~y~t~~ei~~~l~~l~~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~ 119 (195)
.+.|...++|+++.++++++++. ..++..++|+|.+||+|++++|++. ..+||.|+|.|++||+|++|.++
T Consensus 4 ~~ay~~Pys~~~~~~~l~~~~~~--~~v~~~~iG~S~eGR~i~~l~I~~~-------~~~k~~V~i~a~iH~~E~~g~~~ 74 (263)
T cd06234 4 YFAYFAPYSYERHLALIARAQGA--PDVRLEVLGQTVQGRDIDLLTFGEP-------GPGKKKLWIIARQHPGETMAEWF 74 (263)
T ss_pred EEEEeCCCCHHHHHHHHHHHhcC--CCeEEEEEEEcCCCCeEEEEEEccC-------CCCCCEEEEECCCCCCcHHHHHH
Confidence 45678889999999999999873 4699999999999999999999872 23689999999999999999999
Q ss_pred HHHHHHHHHHhcCCChHHHHhhccceEEEEeccCcccchhhhccCCCCCCCCCCCCCCccccCCCCCCc
Q psy11075 120 MVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAHGVDLNRNFPD 188 (195)
Q Consensus 120 ~l~~~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~ 188 (195)
+..+++.|+.+ .|+.++++|++++|+|||++||||+.+. .+|.||+|+||||||..
T Consensus 75 ~~~ll~~L~~~--~d~~~~~ll~~~~~~IvP~~NPDG~~~g-----------~~R~n~~GvDLNRnw~~ 130 (263)
T cd06234 75 MEGLLERLLDP--DDAVARALLEKAVFYVVPNMNPDGSARG-----------HLRTNAAGANLNREWAE 130 (263)
T ss_pred HHHHHHHHhhc--CCHHHHHHHhcCEEEEEeeecchhhhhc-----------CCccCCCCCCCCCCCCC
Confidence 99999999974 5788999999999999999999999986 26899999999999974
No 27
>KOG2649|consensus
Probab=99.97 E-value=2.1e-30 Score=222.87 Aligned_cols=144 Identities=47% Similarity=0.768 Sum_probs=135.3
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCCcEEEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHH
Q psy11075 43 LQRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVF 122 (195)
Q Consensus 43 ~~~y~t~~ei~~~l~~l~~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~ 122 (195)
.-.||+|++|.++|+++.++||.+.++.++|+|+|||+++++.|++ .++.+..++|.+-++|++||+|..|.+.++.
T Consensus 66 ~f~hh~y~~m~~~l~~~~~~~p~itrlYSiGkSv~Gr~L~Vle~sd---~PgeH~~gePEfKyv~nmHGnE~vGRElll~ 142 (500)
T KOG2649|consen 66 TFGHHNYDDLEKALKDFTKRCPNITRLYSIGKSVEGRELWVIEISD---RPGEHEPGEPEFKYIGNMHGNEVVGRELLLR 142 (500)
T ss_pred cCCCCCHHHHHHHHHHHHhhCCcceeeeeccccccCceEEEEEcCC---CCCcccCCCCcceeeeeccccccccHHHHHH
Confidence 3679999999999999999999999999999999999999999999 6888899999999999999999999999999
Q ss_pred HHHHHHHhcCCChHHHHhhccceEEEEeccCcccchhhhccCCCCCCCCCCCCCCccccCCCCCCcCCCc
Q psy11075 123 LIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAHGVDLNRNFPDQFEY 192 (195)
Q Consensus 123 ~~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w~~ 192 (195)
+++.||.+|.+|+.+++|+.++.|+|+|.+|||||+....+++.|. .+|.|++|+|||||||.++..
T Consensus 143 L~e~Lc~~y~~n~~i~~Lv~~trIHlmPSmNPDGyE~a~~~~~~~~---~GR~Nang~DLNrnFPd~~~~ 209 (500)
T KOG2649|consen 143 LAEYLCDNYGKDPRITQLVNNTRIHIMPSMNPDGYEIAKRGDRGWA---TGRNNANGVDLNRNFPDQFRL 209 (500)
T ss_pred HHHHHHHhcCCChHHHHHHhhceEEEecccCcchhhhhhcccccce---ecccCccccchhccCcccccc
Confidence 9999999999999999999999999999999999999988766443 489999999999999997653
No 28
>cd06908 M14_AGBL4_like Peptidase M14-like domain of ATP/GTP binding protein_like (AGBL)-4, and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This eukaryotic subgroup includes the human AGBL4 and the mouse cytosolic carboxypeptidase (CCP)-6. ATP/GTP binding protein (AGTPBP-1/Nna1)-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Mutations in AGTPBP-1/Nna1 cause Purkinje cell degeneration (pcd). AGTPBP-1/Nna1 however does not belong to this subgroup. AGTPBP-1/Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal
Probab=99.97 E-value=2.4e-30 Score=212.42 Aligned_cols=117 Identities=28% Similarity=0.272 Sum_probs=105.0
Q ss_pred HHHHHHHCCCcEEEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHHHHHHHHHhcCCCh
Q psy11075 56 ILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDD 135 (195)
Q Consensus 56 l~~l~~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~~~~L~~~~~~d~ 135 (195)
|++|++++|++++...+|+|++||+|++++|++..+ .....+||.|+|.|++||+|+.|+++++++++.|+. .|+
T Consensus 1 l~~l~~~~p~~~~~~~iG~S~eGR~i~~l~It~~~~--~~~~~~k~~I~i~ariHp~E~~~s~~~~~li~~L~~---~~~ 75 (261)
T cd06908 1 LDALEKRSLDYFRREQLGQSVQKRRLDLLTIDSPDN--LREDSEKKVIFITARVHPGESPSSYVCQGLIDFLVS---NHP 75 (261)
T ss_pred ChHHHhhCCCcEEEEEeEEcCCCCeeEEEEEcCCCc--cccCCCCcEEEEECCcCCCChHHHHHHHHHHHHHhh---CCH
Confidence 467899999999999999999999999999998421 122347899999999999999999999999999997 478
Q ss_pred HHHHhhccceEEEEeccCcccchhhhccCCCCCCCCCCCCCCccccCCCCCCc
Q psy11075 136 RITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAHGVDLNRNFPD 188 (195)
Q Consensus 136 ~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~ 188 (195)
.++.++++++|+|||++||||+++. ..|.||.|+||||||..
T Consensus 76 ~~~~L~~~~~~~IvP~~NPDGv~~g-----------n~R~~~~G~DLNR~w~~ 117 (261)
T cd06908 76 IAKVLREHLVFKIVPMLNPDGVFLG-----------NYRCSLMGHDLNRHWHD 117 (261)
T ss_pred HHHHHHHhCcEEEEeeecCcceeec-----------CCcCcCcCcCCCCCCCC
Confidence 9999999999999999999999986 37999999999999984
No 29
>cd06228 Peptidase_M14-like_3 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe
Probab=99.96 E-value=3.4e-30 Score=217.23 Aligned_cols=113 Identities=19% Similarity=0.331 Sum_probs=98.2
Q ss_pred cccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHHHHHHHHHhcC------------CChHHHHh
Q psy11075 73 GKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDG------------KDDRITKL 140 (195)
Q Consensus 73 G~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~~~~L~~~~~------------~d~~~~~l 140 (195)
++|+|||+|++++|+.. . ...||.|+|.||+|||||++++++++|+++|+..|. .|+.++.+
T Consensus 7 ~~S~EgR~I~~l~I~~~---~---~~~kp~V~i~ggiHAREwis~~~~l~~i~~Ll~~y~~~~~~~yg~~~~~d~~v~~l 80 (332)
T cd06228 7 HKTYEGRTPHGAKIGAG---T---LTSRYGALFIGGVHARERGSPDNLIYFVSDLLNARKAGRGIKYGGRTYTAADVKAI 80 (332)
T ss_pred CCCCCCCeeEEEEEeCC---C---CCCCCEEEEEccccccchhhHHHHHHHHHHHHHhhhccccccccccccccHHHHHH
Confidence 79999999999999973 1 246899999999999999999999999999999873 47889999
Q ss_pred hccceEEEEeccCcccchhhhccCCCCCCCC--CC---CCCCccccCCCCCCcCCCc
Q psy11075 141 LNSTDIYIVPSINPDGFAAAKEGKCDSLDGY--VG---RKNAHGVDLNRNFPDQFEY 192 (195)
Q Consensus 141 l~~~~l~iiP~~NPDG~~~~~~~~~~~~~~~--~~---r~n~~GvDlNRnf~~~w~~ 192 (195)
|+ ++|+|||++|||||+++++.+++|+++. .. ..+|.||||||||+++|+.
T Consensus 81 L~-~~i~IvP~vNPDGy~~s~~~~r~WRKNr~~~~~~~~~~c~GVDLNRNf~~~W~~ 136 (332)
T cd06228 81 LD-AGIVVFPLVNPDGRAHDQTANSCWRKNRNPASAGPNPSSVGVDINRNFDFLWDF 136 (332)
T ss_pred Hh-CeEEEEEeecCcchhheeccchhhhccCCCCcccccCcccccccCCCCCCCcCc
Confidence 99 9999999999999999998887665432 22 2389999999999999973
No 30
>cd06239 Peptidase_M14-like_1_2 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th
Probab=99.96 E-value=7.9e-29 Score=200.30 Aligned_cols=113 Identities=35% Similarity=0.544 Sum_probs=102.7
Q ss_pred HHHHCCCcEEEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHHHHHHHHHhcCCChHHH
Q psy11075 59 TVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRIT 138 (195)
Q Consensus 59 l~~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~~~~L~~~~~~d~~~~ 138 (195)
+.+++|+.+++..+|+|.+||||++++|++ +||+|++.|++||+|+.|+++++.|++.|+.+ .++.++
T Consensus 2 ~~~~~p~~v~~~~iG~S~eGrpI~~l~ig~----------g~~~vli~agiHG~E~~g~~all~ll~~L~~~--~~~~~~ 69 (231)
T cd06239 2 LLEKLPAKFKVEVIGKSVEGRPIYSVKFGS----------GKIKILLWSQMHGNESTTTKALLDLLNFLGTS--KDQEAK 69 (231)
T ss_pred hHHHCCCeeEEEEeeECCCCCeEEEEEEcC----------CCcEEEEEeccCCCCHHHHHHHHHHHHHHHHC--CCHHHH
Confidence 456789999999999999999999999997 37899999999999999999999999999974 445568
Q ss_pred HhhccceEEEEeccCcccchhhhccCCCCCCCCCCCCCCccccCCCCCCcCCCcccC
Q psy11075 139 KLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAHGVDLNRNFPDQFEYEAK 195 (195)
Q Consensus 139 ~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w~~~~~ 195 (195)
.+|++++|+|||++||||++.. +|.|++|+||||||+..-++|+|
T Consensus 70 ~ll~~~~v~iiP~lNPDG~~~~------------~R~N~~GvDLNRdf~~~s~PEtr 114 (231)
T cd06239 70 KILDEVTLVIIPMLNPDGAEAY------------TRVNANGVDLNRDAQDLSQPESR 114 (231)
T ss_pred HHHhCCEEEEEeccCccHHHHc------------ccCCCcCCcCCCCCCCCChHHHH
Confidence 9999999999999999999874 79999999999999988777764
No 31
>cd06229 M14_Endopeptidase_I Peptidase M14-like domain of Gamma-D-glutamyl-L-diamino acid endopeptidase 1 (also known as Gamma-D-glutamyl-meso-diaminopimelate peptidase I, and Endopeptidase I (ENP1); EC 3.4.19.11). ENP1 is a member of the M14 family of metallocarboxypeptidases (MCPs). However it has an exceptional type of activity of hydrolyzing the gamma-D-Glu-(L)meso-diaminopimelic acid (gamma-D-Glu-Dap) bond of L-Ala-gamma-D-Glu-(L)meso-diaminopimelic acid and L-Ala-gamma-D-Glu-(L)meso-diaminopimelic acid(L)-D-Ala peptides. ENP1has a different substrate specificity and cellular role than MpaA (MpaA does not belong to this group). ENP1 hydrolyzes the gamma-D-Glu-Dap bond of MurNAc-tripeptide and MurNAc-tetrapeptide, as well as the amide bond of free tripeptide and tetrapeptide . ENP1 is active on spore cortex peptidoglycan, and is produced at stage IV of sporulation in forespore and spore integuments.
Probab=99.96 E-value=4.8e-29 Score=205.14 Aligned_cols=108 Identities=31% Similarity=0.446 Sum_probs=92.3
Q ss_pred cCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHHHHHHHHHhcCC-----ChHHHHhhccceEEEE
Q psy11075 75 SVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGK-----DDRITKLLNSTDIYIV 149 (195)
Q Consensus 75 S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~~~~L~~~~~~-----d~~~~~ll~~~~l~ii 149 (195)
|++||+|++++|++. +|.|+|.||+||+||+|++++++++++|+..|.. ++.++++|++++|+||
T Consensus 1 S~eGR~I~~~~ig~~----------~~~v~i~agiHarE~~~~~~~l~~i~~L~~~~~~~~~~~~~~~~~lL~~~~i~iv 70 (255)
T cd06229 1 SVLGRDIYEVKLGNG----------PKTVFYNASFHAREWITTLLLMKFIEEYARAYENNEKLGGYDLRELLENVTICFV 70 (255)
T ss_pred CCCCceeeEEEEcCC----------CceEEEECCccccchhhHHHHHHHHHHHHHHhccCccccchhHHHHHhcCeEEEE
Confidence 789999999999973 3789999999999999999999999999998743 4567999999999999
Q ss_pred eccCcccchhhhccCC----------CCC--CC--CCCCCCCccccCCCCCCcCCCc
Q psy11075 150 PSINPDGFAAAKEGKC----------DSL--DG--YVGRKNAHGVDLNRNFPDQFEY 192 (195)
Q Consensus 150 P~~NPDG~~~~~~~~~----------~~~--~~--~~~r~n~~GvDlNRnf~~~w~~ 192 (195)
|++||||+++.+++.. .|+ +. ..+|.||+||||||||++.|+.
T Consensus 71 P~~NPDG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~GVDLNRNf~~~w~~ 127 (255)
T cd06229 71 PMVNPDGVEIVQNGPYAIRNYYLELLVINAGSINFKEWKANARGVDLNRNFPAGWEK 127 (255)
T ss_pred eCccCCchheeeecccccccchhhhHHhhcCCCcccccccCCcccccCCCCCCCCCc
Confidence 9999999999887532 111 11 2348899999999999999975
No 32
>cd06241 Peptidase_M14-like_1_4 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th
Probab=99.96 E-value=1.1e-28 Score=203.87 Aligned_cols=136 Identities=26% Similarity=0.382 Sum_probs=111.4
Q ss_pred HHHHHHHHHCCCcEEEEEccccCCCceeeEEEEeecCCC-C-CCCCCCcceEEEeecccCCCchhHHHHHHHHHHHHHhc
Q psy11075 54 AFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDS-P-DGRTLMKPMFKYVANMHGDETVGYALMVFLIQYLVLKD 131 (195)
Q Consensus 54 ~~l~~l~~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~-~-~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~~~~L~~~~ 131 (195)
+|+++|++++| .+++.++|+|.+||+|++++|+..... + .....+||+|+|+||+||+|+.|.++++.++++|+.+.
T Consensus 1 a~~~~La~~~~-~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~~~~~kp~v~i~agiH~~E~~G~~a~~~ll~~L~~~~ 79 (266)
T cd06241 1 AFLERLAAASP-LIRLESFGKTPEGRPLHLLVLSKDGAFTPEEAKRSGKPVVLVQAGIHAGEIDGKDAGLMLLRDLADGK 79 (266)
T ss_pred CHHHHHHHhCC-ceEEEEeEeCCCCCeeEEEEEecCCccchhhhcccCCCEEEEeCCcCCCCchHHHHHHHHHHHHHhcc
Confidence 47899999986 489999999999999999999974210 0 11235799999999999999999999999999999742
Q ss_pred CCChHHHHhhccceEEEEeccCcccchhhhccCCCCCC---CCCCCCCCccccCCCCCCcCCCcccC
Q psy11075 132 GKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLD---GYVGRKNAHGVDLNRNFPDQFEYEAK 195 (195)
Q Consensus 132 ~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~---~~~~r~n~~GvDlNRnf~~~w~~~~~ 195 (195)
. .++|++++|+|||++||||+++.....+...+ ...+|.|++|+||||||+..-++|+|
T Consensus 80 --~---~~ll~~~~i~ivP~~NpDG~~~~~~~~r~~q~gp~~~~~R~na~g~DLNRdf~~~~~pEtr 141 (266)
T cd06241 80 --K---DALLDKVVLVFIPVFNVDGHERRSPYNRTNQNGPEEYGWRGNARNLNLNRDFIKLDAPEMR 141 (266)
T ss_pred --h---HHHHhCCEEEEEeCCCccHHHhcccccccccCCCCccCceecccceecCCCCcccCCHHHH
Confidence 1 28999999999999999999987655443322 24689999999999999987777764
No 33
>cd03856 M14_Nna1_like Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP), and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This subfamily includes the human AGTPBP-1 and AGBL -2, -3, -4, and -5, and the mouse Nna1/CCP-1 and CCP -2 through -6. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Nna1 is widely expressed in the developing and adult nervous systems, including cerebellar Purkinje and granule neurons, miral cells of the olfactory bulb and retinal photoreceptors. Nna1 is also induced in axotomized motor neurons. M
Probab=99.96 E-value=1.3e-28 Score=203.56 Aligned_cols=127 Identities=22% Similarity=0.209 Sum_probs=111.7
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCCcEEEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHH
Q psy11075 43 LQRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVF 122 (195)
Q Consensus 43 ~~~y~t~~ei~~~l~~l~~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~ 122 (195)
+....+|.+....++.++ ++.+++.++|+|.+||+|++++++. ..+||.|+|+|++||+|++|++++++
T Consensus 7 ~~~~~~y~~~~~l~~sl~---~~~v~l~~IG~s~egr~i~~~~~~~--------~~~k~~i~i~a~iH~~E~~~~~~~~~ 75 (269)
T cd03856 7 AHANQIYDRRLALCESLQ---GNSCDLLTITSPPEGNDIKYEHLCS--------FANKKYIFLIARVHPGETNASWVMKG 75 (269)
T ss_pred hcCCcCHHHHHHHHHHhc---CCceeEEEeccCCCCccccceeccC--------CCCCcEEEEEcCcCCCchHHHHHHHH
Confidence 345578889999998887 7779999999999999999988865 24689999999999999999999999
Q ss_pred HHHHHHHhcCCChHHHHhhccceEEEEeccCcccchhhhccCCCCCCCCCCCCCCccccCCCCCCc---CCCccc
Q psy11075 123 LIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAHGVDLNRNFPD---QFEYEA 194 (195)
Q Consensus 123 ~~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~---~w~~~~ 194 (195)
+++.|+. .++.++.+|++++|+|||++||||+++. .+|+||.|+||||||.. ...+|+
T Consensus 76 li~~Ll~---~~~~~~~ll~~~~~~ivP~~NPDG~~~g-----------~~R~n~~G~DLNR~~~~p~~~~~pE~ 136 (269)
T cd03856 76 FLEFLLS---DNPTAQSLRESFVFKIVPMLNPDGVIRG-----------NYRCSLSGVDLNRQWQNPSPDLHPEI 136 (269)
T ss_pred HHHHHHh---CCHHHHHHHhcCeEEEEeeeCCcccccc-----------CCcCCCCCCCcCCCCCCCCCCCCCCH
Confidence 9999987 3456899999999999999999999875 37999999999999997 566664
No 34
>cd06235 M14_Nna1_like_2 Subgroup of the Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP), and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This eukaryotic subgroup includes the human Nna1/AGTPBP-1 and AGBL -2, -3, -4, and -5, and the mouse Nna1/CCP-1 and CCP -2 through -6. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Nna1 is widely expressed in the developing and adult nervous systems, including cerebellar Purkinje and granule neurons, miral cells of the olfactory bulb and retinal photoreceptors. Nna1 is also induc
Probab=99.95 E-value=1e-27 Score=197.31 Aligned_cols=111 Identities=22% Similarity=0.266 Sum_probs=97.0
Q ss_pred CCCcEEEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHHHHHHHHHhcCCChHHHHhhc
Q psy11075 63 YPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLN 142 (195)
Q Consensus 63 ~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~~~~L~~~~~~d~~~~~ll~ 142 (195)
.+..++...+|+|.+||+|++++|++.... .....+||.|+|+|++||+|+.|+++++.+++.|+. .++.+..+++
T Consensus 9 ~~~~~~~~~iG~S~eGr~i~~l~i~~~~~~-~~~~~~k~~V~i~a~iH~~E~~~s~~~~~ll~~Ll~---~~~~~~~Ll~ 84 (258)
T cd06235 9 NNQYLKRKILCTTLGGLPVPLLTITSPSSK-SIPIKKKKVIVITARQHPGETNSSFVMQGFIDFLLS---DSPEAQYLRE 84 (258)
T ss_pred CCCceEEEEeEEcCCCCeeeEEEEeCCccc-ccccCCCcEEEEECCcCCCChHHHHHHHHHHHHHhc---CCHHHHHHHh
Confidence 467899999999999999999999974211 122357899999999999999999999999999986 4577899999
Q ss_pred cceEEEEeccCcccchhhhccCCCCCCCCCCCCCCccccCCCCCCc
Q psy11075 143 STDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAHGVDLNRNFPD 188 (195)
Q Consensus 143 ~~~l~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~ 188 (195)
+++|+|||++||||+.+. .+|.|++|+||||||..
T Consensus 85 ~~~~~iiPm~NPDG~~~g-----------~~R~n~~GvDLNR~w~~ 119 (258)
T cd06235 85 NFIFKIIPMLNPDGVIHG-----------NYRCSLSGIDLNRQWKN 119 (258)
T ss_pred ccEEEEEccccccceeec-----------CCcCCCCCCCcCCCCCC
Confidence 999999999999999874 37999999999999986
No 35
>cd06243 Peptidase_M14-like_1_6 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th
Probab=99.95 E-value=1.1e-27 Score=194.20 Aligned_cols=110 Identities=32% Similarity=0.504 Sum_probs=96.6
Q ss_pred ccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHHHHHHHHHhcCCChHHHHhhccceEEEEec
Q psy11075 72 IGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPS 151 (195)
Q Consensus 72 iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~~~~L~~~~~~d~~~~~ll~~~~l~iiP~ 151 (195)
+|+|+|||||++++|++.++.......+||.|++++|+||+|++|+++++.++++|+. ..++.++.+|++++|+|+|+
T Consensus 1 iG~S~eGRpi~~l~i~~~~~~~~~~~~~~p~v~i~~giHG~E~~G~~a~l~ll~~L~~--~~~~~~~~lL~~~~i~ivP~ 78 (236)
T cd06243 1 IGTSQRGRPIHLVRVGFAEGPSALDIANRPTVLLVGTQHGDEPAGREALLIIARDLAF--GEDEELVPLLHQTTVLFVPT 78 (236)
T ss_pred CccCCCCCeeEEEEEecCCCccccccCCCCEEEEECCcCCCChHHHHHHHHHHHHHHh--cCCHHHHHHHhcceEEEEeC
Confidence 6999999999999999853222223457899999999999999999999999999987 46788999999999999999
Q ss_pred cCcccchhhhccCCCCCCCCCCCCCCccccCCCCCCcCCCcccC
Q psy11075 152 INPDGFAAAKEGKCDSLDGYVGRKNAHGVDLNRNFPDQFEYEAK 195 (195)
Q Consensus 152 ~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w~~~~~ 195 (195)
+||||+++. +|.|+.|+||||||+..-++|+|
T Consensus 79 ~NPDG~~~~------------~R~n~~g~DlNRd~~~~~~pEt~ 110 (236)
T cd06243 79 ANPDGREAD------------TRSNADGIDINRDHLLLNTPEAQ 110 (236)
T ss_pred cCccHhhcC------------CcCCCCCcccCCCCCCCCCHHHH
Confidence 999999985 79999999999999988888764
No 36
>cd06244 Peptidase_M14-like_1_7 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th
Probab=99.94 E-value=5.3e-27 Score=192.17 Aligned_cols=112 Identities=32% Similarity=0.352 Sum_probs=96.4
Q ss_pred ccccCCCceeeEEEEeecCC---------------CC--------CCCCCCcceEEEeecccCCCchhHHHHHHHHHHHH
Q psy11075 72 IGKSVQGRNLWAVEITHDVD---------------SP--------DGRTLMKPMFKYVANMHGDETVGYALMVFLIQYLV 128 (195)
Q Consensus 72 iG~S~~Gr~i~~~~i~~~~~---------------~~--------~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~~~~L~ 128 (195)
+|+|.|||+++++.|++.+. ++ ......|+.|++++++||+|++|+++++.+++.|+
T Consensus 1 iGkS~eGR~l~~~~Is~~~a~ld~~~~~~~~l~l~dp~~~~~~~~~~~~~~~k~v~~~~~iHg~E~~g~~a~l~ll~~L~ 80 (268)
T cd06244 1 AGKSAEGRDIPVVVVAKPEAAVDKYENETLPLMLENPPELADKIEDGTIEDYKPPIINNNIHPDETPGIDAQTELIEELA 80 (268)
T ss_pred CCcCCCCCeeEEEEEeCcHHHHHHHHHHhhhhhhcCcccchhhhccccccccCeEEEEeCcCCCCHHHHHHHHHHHHHHH
Confidence 69999999999999999741 01 00133567788889999999999999999999999
Q ss_pred HhcCC--------------ChHHHHhhccceEEEEeccCcccchhhhccCCCCCCCCCCCCCCccccCCCCCCcCCCccc
Q psy11075 129 LKDGK--------------DDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAHGVDLNRNFPDQFEYEA 194 (195)
Q Consensus 129 ~~~~~--------------d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w~~~~ 194 (195)
.++.. ++.++.+|+++.|+|+|++||||+++. +|.|++|+||||||.++-++|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~i~~lL~~~~i~i~P~~NPDG~~~~------------~R~Na~G~DLNRD~~~~sqpEt 148 (268)
T cd06244 81 QEDEIEFNTTDADGNEVTETLDVDDLLEKVIFLFNVTENPDGRVAG------------TRENANGFDLNRDNSFQTQPET 148 (268)
T ss_pred hcccccccccccccccccCCHHHHHHHhcCEEEEEecccCCcceee------------eecCCCccccCCCCCcccCHHH
Confidence 86532 788999999999999999999999874 8999999999999999988887
Q ss_pred C
Q psy11075 195 K 195 (195)
Q Consensus 195 ~ 195 (195)
|
T Consensus 149 ~ 149 (268)
T cd06244 149 Q 149 (268)
T ss_pred H
Confidence 5
No 37
>cd06238 Peptidase_M14-like_1_1 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. T
Probab=99.94 E-value=5.3e-27 Score=193.88 Aligned_cols=122 Identities=24% Similarity=0.241 Sum_probs=99.8
Q ss_pred ccccCCCceeeEEEEeecCCCC---------------C----CCCCCcceEEEeecccCCCchhHHHHHHHHHHHHHhcC
Q psy11075 72 IGKSVQGRNLWAVEITHDVDSP---------------D----GRTLMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDG 132 (195)
Q Consensus 72 iG~S~~Gr~i~~~~i~~~~~~~---------------~----~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~~~~L~~~~~ 132 (195)
+|+|+|||+|.+++|++..+.. . .....||.|+|.+++||+|++|++++++++++|+..
T Consensus 1 ~G~s~egR~l~~~~I~s~~n~~~l~~~~~~~~~la~p~~~~~~~~~~~~~v~i~~~iH~~E~~g~~~~l~l~~~L~~~-- 78 (271)
T cd06238 1 YGRTHEGRPLLLATITSPENIARLDQIREDHLALADPAATSSLISDQPVVVWLGYSVHGNEISGTEAALLTAYHLAAA-- 78 (271)
T ss_pred CCcCCCCCeeEEEEEeCHHHHHhHHHHHHHHHHhcCccccccccccCCcEEEEECCcCCCChHHHHHHHHHHHHHHHc--
Confidence 5999999999999999864321 0 123468899999999999999999999999999984
Q ss_pred CChHHHHhhccceEEEEeccCcccchhhh-----------ccCCCCC----CCCCCCCCCccccCCCCCCcCCCcccC
Q psy11075 133 KDDRITKLLNSTDIYIVPSINPDGFAAAK-----------EGKCDSL----DGYVGRKNAHGVDLNRNFPDQFEYEAK 195 (195)
Q Consensus 133 ~d~~~~~ll~~~~l~iiP~~NPDG~~~~~-----------~~~~~~~----~~~~~r~n~~GvDlNRnf~~~w~~~~~ 195 (195)
.++.++++|++++|+|+|++||||++... +.++.++ .+..+|.||+|+||||||...-++|+|
T Consensus 79 ~~~~~~~ll~~~~i~i~P~~NPDG~~r~~~w~~~~~~~~~~~d~~~r~~~~~wp~~R~n~~g~DLNRD~~~~s~pEtr 156 (271)
T cd06238 79 QGDEIEALLDNAVVLIDPMQNPDGRDRFVNWYNSNRGMVPSADPQDREHNEPWPGGRTNHYWFDLNRDWLPLTQPESR 156 (271)
T ss_pred CCHHHHHHHhcCEEEEEeccCCCHHHHHHHhhhhccCCccccchhhhhcccCCccccccccCcccccccccccCHHHH
Confidence 67889999999999999999999999532 1122221 223579999999999999999998875
No 38
>cd06907 M14_AGBL2-3_like Peptidase M14-like domain of ATP/GTP binding protein_like (AGBL)-2, and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This subgroup includes the human AGBL-2, and -3, and the mouse cytosolic carboxypeptidase (CCPs)-2, and -3. ATP/GTP binding protein (AGTPBP-1/Nna1)-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Mutations in AGTPBP-1/Nna1 cause Purkinje cell degeneration (pcd). AGTPBP-1/Nna1 however does not belong to this subgroup. AGTPBP-1/Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N
Probab=99.94 E-value=2.1e-26 Score=188.31 Aligned_cols=113 Identities=23% Similarity=0.353 Sum_probs=98.8
Q ss_pred CCcEEEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHHHHHHHHHhcCCChHHHHhhcc
Q psy11075 64 PHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNS 143 (195)
Q Consensus 64 p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~~~~L~~~~~~d~~~~~ll~~ 143 (195)
++.++..++|+|++||+|++++|++..+.. .....||.|+|.|++||+|+.|.+++..+++.|+. .++.++.++++
T Consensus 11 ~~~~~~~~lg~S~eGR~i~~LtIt~~~~~~-~~~~~K~~I~I~ariHp~E~~~s~~~~gll~~L~~---~~~~a~~Lr~~ 86 (261)
T cd06907 11 SKFCKLRVLCRTLAGNTVYLLTITSPSSNP-SLAAAKKAVVLTARVHPGETNASWMMKGFLDFLTS---NSPDAQLLRDT 86 (261)
T ss_pred CCceEEEEEEECCCCCeeeEEEEcCCCccc-cccCCCCEEEEECCcCCChHHHHHHHHHHHHHHhc---CCHHHHHHHhc
Confidence 567999999999999999999998742211 12347999999999999999999999999999985 57899999999
Q ss_pred ceEEEEeccCcccchhhhccCCCCCCCCCCCCCCccccCCCCCCcCCC
Q psy11075 144 TDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAHGVDLNRNFPDQFE 191 (195)
Q Consensus 144 ~~l~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w~ 191 (195)
++|+||||+||||+... ..|.++.|+||||||...|.
T Consensus 87 ~~f~IvPmlNPDGv~~G-----------~~R~~~~G~DLNR~w~~p~~ 123 (261)
T cd06907 87 FIFKIVPMLNPDGVIVG-----------NYRCSLAGRDLNRNYKTPLK 123 (261)
T ss_pred CCEEEEEeecCcccccc-----------CCcCCCcCCCCCcCCCCCCc
Confidence 99999999999999976 37999999999999998774
No 39
>cd06236 M14_AGBL5_like Peptidase M14-like domain of ATP/GTP binding protein_like (AGBL)-5, and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This eukaryotic subgroup includes the human AGBL5 and the mouse cytosolic carboxypeptidase (CCP)-5. ATP/GTP binding protein (AGTPBP-1/Nna1)-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Mutations in AGTPBP-1/Nna1 cause Purkinje cell degeneration (pcd). AGTPBP-1/Nna1 however does not belong to this subgroup. AGTPBP-1/Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal
Probab=99.93 E-value=6.5e-26 Score=189.08 Aligned_cols=110 Identities=25% Similarity=0.324 Sum_probs=96.0
Q ss_pred cEEEEEccccCCCceeeEEEEeecCCCCC------------------CCCCCcceEEEeecccCCCchhHHHHHHHHHHH
Q psy11075 66 LVRAETIGKSVQGRNLWAVEITHDVDSPD------------------GRTLMKPMFKYVANMHGDETVGYALMVFLIQYL 127 (195)
Q Consensus 66 ~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~------------------~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~~~~L 127 (195)
+++...+|+|.+||+|++++|++..+... ....+||.|||.|++||+|+.|+++++++++.|
T Consensus 15 y~~~~~Lg~S~eGR~i~lLtITs~~~~~~~~~~~~~~l~~~~~~~~~~~~~~K~~V~I~ariHp~E~~~s~~~~~ll~~L 94 (304)
T cd06236 15 YYHREVLCYSLEGRRIDLLTITSCHGKLEQREPRLEGLFPDRKTPRPHFFFGKPVVFISSRVHPGETPSSFVFNGFLKFL 94 (304)
T ss_pred EEEEEEeEECCCCCceEEEEEecCcccccccccccccccccccccccccccCCcEEEEECCcCCCCchHHHHHHHHHHHH
Confidence 58889999999999999999998532110 123579999999999999999999999999999
Q ss_pred HHhcCCChHHHHhhccceEEEEeccCcccchhhhccCCCCCCCCCCCCCCccccCCCCCCc
Q psy11075 128 VLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAHGVDLNRNFPD 188 (195)
Q Consensus 128 ~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~ 188 (195)
+.+ .|+.+..++++++|+|||++||||+++. .+|.||.|+||||+|..
T Consensus 95 l~~--~d~~a~~L~~~~~~~IvPmlNPDGv~~g-----------~~R~~~~G~DLNR~y~~ 142 (304)
T cd06236 95 LNK--DDPRAALLRRRFVFKLIPMLNPDGVYRG-----------HYRTDTRGVNLNRVYLN 142 (304)
T ss_pred HhC--CCHHHHHHHhCCeEEEEEeEcccccccC-----------ccccCCcCCCcCcCCCC
Confidence 974 5788999999999999999999999986 37999999999999874
No 40
>cd03857 Peptidase_M14-like_1 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The
Probab=99.93 E-value=7.8e-26 Score=183.04 Aligned_cols=109 Identities=37% Similarity=0.536 Sum_probs=94.1
Q ss_pred ccccCCCceeeEEEEeecCCCC--CCCCCCcceEEEeecccCCCchhHHHHHHHHHHHHHhcCCChHHHHhhccceEEEE
Q psy11075 72 IGKSVQGRNLWAVEITHDVDSP--DGRTLMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIV 149 (195)
Q Consensus 72 iG~S~~Gr~i~~~~i~~~~~~~--~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~~~~L~~~~~~d~~~~~ll~~~~l~ii 149 (195)
+|+|.|||||++++|++..+.. +....+||+|++.||+||+|+.|+++++.++++|+.+ +.....+|++++|+||
T Consensus 1 iG~S~eGRpi~~~~i~~~~~~~~~~~~~~~k~~v~i~~giHg~E~~g~~a~~~l~~~l~~~---~~~~~~ll~~~~i~iv 77 (226)
T cd03857 1 IGKSVEGRPLWMVTLTTAEGMKKRALAKEGKPRVWIDAQIHGNESAGSDALLELLRQLASA---SDEEAKMLENIVIVLI 77 (226)
T ss_pred CccCCCCCeEEEEEEeCCccccccccccCCCcEEEEECCcCCCCchHHHHHHHHHHHHHhC---CHHHHHHHhCCEEEEE
Confidence 6999999999999999853211 1234578999999999999999999999999999863 4455899999999999
Q ss_pred eccCcccchhhhccCCCCCCCCCCCCCCccccCCCCCCcCCCcccC
Q psy11075 150 PSINPDGFAAAKEGKCDSLDGYVGRKNAHGVDLNRNFPDQFEYEAK 195 (195)
Q Consensus 150 P~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w~~~~~ 195 (195)
|++||||++.. +|.|++|+||||||+..-++|+|
T Consensus 78 P~~NPDG~~~~------------~R~n~~g~DLNRd~~~~~~pEt~ 111 (226)
T cd03857 78 PRANPDGAALF------------TRENANGLDLNRDFLKLTQPETR 111 (226)
T ss_pred eccCCChHHhc------------cccCCCcccCCCCCCCcCCHHHH
Confidence 99999999986 79999999999999998777764
No 41
>cd06240 Peptidase_M14-like_1_3 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. T
Probab=99.92 E-value=2.1e-25 Score=184.11 Aligned_cols=126 Identities=22% Similarity=0.174 Sum_probs=99.6
Q ss_pred EEEEccccCCCceeeEEEEeecCCCC------------------------CCCCCCcceEEEeecccCCCchhHHHHHHH
Q psy11075 68 RAETIGKSVQGRNLWAVEITHDVDSP------------------------DGRTLMKPMFKYVANMHGDETVGYALMVFL 123 (195)
Q Consensus 68 ~~~~iG~S~~Gr~i~~~~i~~~~~~~------------------------~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~ 123 (195)
++.++|+|+|||+|++++|++.++.. ......||.|+|.+++||+|++|+++++++
T Consensus 1 ~l~~iGkS~EGR~l~~~~Iss~~n~~~ld~~~~~~~~la~~~~~~~~~a~~~~~~~kp~v~i~~~iHg~E~~g~ea~l~l 80 (273)
T cd06240 1 KLVEIGKTEEGRPQIMAAISSPENLAKLDHYKAILRKLADPRGLTEEQARALIAEGKPIVWIDGGLHSTETGGPQMLMEL 80 (273)
T ss_pred CeeEeecCCCCCeEEEEEeeChhHhhhHHHHHHHHhhhhccccccchhhhhhhccCCCEEEEECCcCCCchHHHHHHHHH
Confidence 36789999999999999999864310 012356899999999999999999999999
Q ss_pred HHHHHHhcCCChHHHHhhccceEEEEeccCcccchhhhccCC-CCC-------CCCCCCCCCccccCCCCCCcCCCcccC
Q psy11075 124 IQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKC-DSL-------DGYVGRKNAHGVDLNRNFPDQFEYEAK 195 (195)
Q Consensus 124 ~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~-~~~-------~~~~~r~n~~GvDlNRnf~~~w~~~~~ 195 (195)
++.|+.+ .|+.++++|++++|+|+|++||||++....-.+ ... .....+.+..|+||||||-..-.+|+|
T Consensus 81 ~~~L~~~--~d~~~~~lLd~~~i~i~P~~NPDG~er~~~w~~~~~~~~~~~~~~~~~~~~~y~g~DlNRD~~~~~~~et~ 158 (273)
T cd06240 81 AYRLATE--EDPEIKRILDNVIVLIVPVANPDGRDRVVDWYMRTLGPPKRDRSPLPPLYGKYVGHDNNRDGYMNQQETTN 158 (273)
T ss_pred HHHHHhc--CCHHHHHHHhcCEEEEEeCcCCCHHHHhhhhhhhccCCcccCCCCcccccCccCCcCCCcccchhcCHHHH
Confidence 9999874 789999999999999999999999988542111 100 011226778999999999887666653
No 42
>cd03862 Peptidase_M14-like_7 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe
Probab=99.92 E-value=6.6e-25 Score=181.56 Aligned_cols=96 Identities=28% Similarity=0.457 Sum_probs=86.9
Q ss_pred CCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHHHHHHHHHhcCCChHHHHhhccceEEEEeccCccc
Q psy11075 77 QGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDG 156 (195)
Q Consensus 77 ~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG 156 (195)
...||++++|++. ...||+|+++||+||+|++|++++++++++|+..|..|+.++++|++++|+|||++||||
T Consensus 8 ~~~pi~~v~ig~~-------~~~~p~v~i~~giHg~E~ig~~~~l~~l~~L~~~~~~d~~~~~ll~~~~i~ivP~vNPdG 80 (273)
T cd03862 8 LRFPIYALELGSP-------DPKAPVLGLVGGVHGLERIGTQVLLAFLESLLERLRWDKLLQELLEKVRLVFLPLVNPVG 80 (273)
T ss_pred CcceeEEEEecCC-------CCCCCEEEEEcCcCCCcHHHHHHHHHHHHHHHHhccccHHHHHHHhCCeEEEEeccCcCH
Confidence 4568888888863 245799999999999999999999999999999988899999999999999999999999
Q ss_pred chhhhccCCCCCCCCCCCCCCccccCCCCCCcCCC
Q psy11075 157 FAAAKEGKCDSLDGYVGRKNAHGVDLNRNFPDQFE 191 (195)
Q Consensus 157 ~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w~ 191 (195)
+... +|.|++||||||||++.|+
T Consensus 81 ~~~~------------~R~n~~GVDLNRNfp~~~~ 103 (273)
T cd03862 81 MALK------------TRSNGNGVDLMRNAPVDAE 103 (273)
T ss_pred HHhc------------ccCCCCCcccCCCCCCCcc
Confidence 8764 7899999999999999986
No 43
>cd06906 M14_Nna1 Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP), and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This eukaryotic subgroup includes the mouse Nna1/CCP-1, and -4 proteins, and the human Nna1/AGTPBP-1 protein. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Nna1 is widely expressed in the developing and adult nervous systems, including cerebellar Purkinje and granule neurons, miral cells of the olfactory bulb and retinal photoreceptors. Nna1 is also induced in axotomized motor neurons. Mutations in Nna
Probab=99.91 E-value=5.8e-24 Score=174.76 Aligned_cols=118 Identities=23% Similarity=0.235 Sum_probs=99.2
Q ss_pred HHHHHHCCCcEEEEEccccCCCceeeEEEEeecCCCC----CCCCCCcceEEEeecccCCCchhHHHHHHHHHHHHHhcC
Q psy11075 57 LKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSP----DGRTLMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDG 132 (195)
Q Consensus 57 ~~l~~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~----~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~~~~L~~~~~ 132 (195)
+......+.+++...+++|.+||++++++|++.++.. ......||.|+|.|++|++|..|.+++..++..|+.
T Consensus 5 ~~~~~~~~~y~~~~~Lc~Tl~G~~v~lltIt~~~~~~~~~~~~~~~~kp~I~I~ARvHPgEt~~Swi~~g~l~~L~~--- 81 (278)
T cd06906 5 ESLHDPQQIYFRQQVLCETLGGNSCPLLTITAMPESNYYEHICQFRNRPYIFLSARVHPGETNASWVMKGTLEFLMS--- 81 (278)
T ss_pred hhhcCCcccEEeeecceeccCCCceeEEEEeCCCccccccccccccCCcEEEEEcccCCCcchHHHHHHHHHHHHhC---
Confidence 3333344567999999999999999999999843211 011247899999999999999999999999998875
Q ss_pred CChHHHHhhccceEEEEeccCcccchhhhccCCCCCCCCCCCCCCccccCCCCCCc
Q psy11075 133 KDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAHGVDLNRNFPD 188 (195)
Q Consensus 133 ~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~ 188 (195)
.|+.++.|+++++|+||||+||||+.+. ..|+|..|+||||||..
T Consensus 82 ~d~~a~~Lr~~~~f~IvPmlNPDGvv~G-----------n~Rc~~~G~DLNR~w~~ 126 (278)
T cd06906 82 SSPTAQSLRESYIFKIVPMLNPDGVING-----------NHRCSLSGEDLNRQWQS 126 (278)
T ss_pred CCHHHHHHHHhCcEEEEeeecCccceec-----------ccccCCCCCCCCCCCCC
Confidence 6899999999999999999999999876 38999999999999974
No 44
>PRK10602 murein peptide amidase A; Provisional
Probab=99.90 E-value=3.4e-24 Score=173.74 Aligned_cols=94 Identities=31% Similarity=0.401 Sum_probs=81.5
Q ss_pred EEEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHHHHHHHHHhcCCChHHHHhhccceE
Q psy11075 67 VRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDI 146 (195)
Q Consensus 67 v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~~~~L~~~~~~d~~~~~ll~~~~l 146 (195)
+...++|+|++||||++++++.. +|+.++++||+||+|+.|+++++++++.|..+ ...+
T Consensus 15 ~~~~~iG~S~egrpi~~l~~~~~---------~~~~vli~agiHG~E~~g~~~~~~l~~~l~~~------------~~~~ 73 (237)
T PRK10602 15 PGTEHYGRSLLGAPLLWFPAPAA---------SRESGLILAGTHGDETASVVTLSCALRTLTPS------------LRRH 73 (237)
T ss_pred ccccccccccCCCceEEEEcCCC---------CCceEEEEecCCCCcHHHHHHHHHHHHhhhhh------------ccce
Confidence 57889999999999999988752 47889999999999999999999999988752 2357
Q ss_pred EEEeccCcccchhhhccCCCCCCCCCCCCCCccccCCCCCCc-CCCcc
Q psy11075 147 YIVPSINPDGFAAAKEGKCDSLDGYVGRKNAHGVDLNRNFPD-QFEYE 193 (195)
Q Consensus 147 ~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~-~w~~~ 193 (195)
.|||++||||+++. .|.||+|+|||||||. .|..+
T Consensus 74 ~iipvvNPDG~~~~------------~R~n~~GvDLNRnFp~~~w~~~ 109 (237)
T PRK10602 74 HVVLAVNPDGCQLG------------LRANANGVDLNRNFPAANWKEG 109 (237)
T ss_pred EEEEEECccccccc------------cccCCCCCchhhcCCCcccccc
Confidence 89999999999886 7899999999999997 77543
No 45
>cd06231 Peptidase_M14-like_4 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe
Probab=99.85 E-value=2.5e-21 Score=157.36 Aligned_cols=95 Identities=27% Similarity=0.395 Sum_probs=83.6
Q ss_pred cEEEEEccccCC-CceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHHHHHHHHHhcCCChHHHHhhccc
Q psy11075 66 LVRAETIGKSVQ-GRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNST 144 (195)
Q Consensus 66 ~v~~~~iG~S~~-Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~~~~L~~~~~~d~~~~~ll~~~ 144 (195)
.+++..+|+... +++|+++++.+. ..+||+|+|+||+||+|++|+++++.|+++++. .+++++
T Consensus 14 ~~~~~~~g~~~~~~~pL~~l~~~~~-------~~~~p~vlI~gGiHG~E~~G~~a~l~~l~~l~~---------~~l~~~ 77 (236)
T cd06231 14 RLDVREYGQLAYQSYPLYALKSRGW-------DSDLPRVLITAGIHGDEPAGPLGALEFLRAAAL---------ELAQDV 77 (236)
T ss_pred ceEEEEccccccCCeeEEEEEcCCC-------CCCCCEEEEECCCCCCcHHHHHHHHHHHHHHHH---------HHhcCC
Confidence 378899998766 999999998763 236899999999999999999999999999874 267889
Q ss_pred eEEEEeccCcccchhhhccCCCCCCCCCCCCCCccccCCCCCCc
Q psy11075 145 DIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAHGVDLNRNFPD 188 (195)
Q Consensus 145 ~l~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~ 188 (195)
.|+|+|++||||++.. .|.|+.|+||||||+.
T Consensus 78 ~i~ivP~vNPdG~~~~------------~R~n~~g~DLNR~F~~ 109 (236)
T cd06231 78 NLSVYPCINPSGFEAI------------TRWNRNGIDPNRSFRS 109 (236)
T ss_pred eEEEEECcChhHHhcC------------ccCCCCCccccCCCCC
Confidence 9999999999999875 7899999999999995
No 46
>cd06232 Peptidase_M14-like_5 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The
Probab=99.84 E-value=3.2e-21 Score=154.04 Aligned_cols=117 Identities=21% Similarity=0.200 Sum_probs=92.3
Q ss_pred CCHHHHHHHHHHHHHHCCCcEEEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHHHHHH
Q psy11075 47 YNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFLIQY 126 (195)
Q Consensus 47 ~t~~ei~~~l~~l~~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~~~~ 126 (195)
.++.+|...|.+|-.. .+ --+|+|||+|++++|+. +||.|+|.||+||+||+|+.++++|+++
T Consensus 2 ~~~~~i~~~l~~~~g~-----~~--~a~S~EGR~I~~l~i~~----------~Kp~I~I~gGvHarEwig~~~al~fi~~ 64 (240)
T cd06232 2 LSAGQIAYELAVLPGI-----EF--AARSRQGRPVTGRYVAG----------LDHPVVISAGQHANETSGVVGALRAAEA 64 (240)
T ss_pred CCHHHHHHHHhhcCCc-----cc--cccccCCCeeeEEEecC----------CCcEEEEeCCcCCCcchhHHHHHHHHHH
Confidence 4677777777776421 11 35799999999999943 4899999999999999999999999999
Q ss_pred HHHhcCCChHHHHhhccceEEEEeccCcccchhhhccCCCCCCC---CCCCCCCccccCC-CCCCcCCCc
Q psy11075 127 LVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLDG---YVGRKNAHGVDLN-RNFPDQFEY 192 (195)
Q Consensus 127 L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~~---~~~r~n~~GvDlN-Rnf~~~w~~ 192 (195)
|++ +++++|+|+|++|||||++.. ..+.|++. -..|.|+.|.|+| |++....+.
T Consensus 65 L~~-----------~~~~n~~I~P~vNPDGYe~~~-~L~r~nP~~~hHaaR~~A~g~D~~fr~~~~~~Es 122 (240)
T cd06232 65 LAA-----------RPGAHFALIPLENPDGYALHE-RLRAEHPRHMHHAARYTALGDDLEYREFPPFGER 122 (240)
T ss_pred Hhc-----------cCCceEEEEEeeCCcHHHhhc-hhhccCcccccchhhhcccCCCcccccCCcchHH
Confidence 985 578999999999999999853 11233322 1359999999999 998876443
No 47
>cd06904 M14_MpaA_like Peptidase M14-like domain of Escherichia coli Murein Peptide Amidase A (MpaA) and related proteins. MpaA is a member of the M14 family of metallocarboxypeptidases (MCPs), however it has an exceptional type of activity, it hydrolyzes the gamma-D-glutamyl-meso-diaminopimelic acid (gamma-D-Glu-Dap) bond in murein peptides. MpaA is specific for cleavage of the gamma-D-Glu-Dap bond of free murein tripeptide; it may also cleave murein tetrapeptide. MpaA has a different substrate specificity and cellular role than endopeptidase I, ENP1 (ENP1 does not belong to this group). MpaA works on free murein peptide in the recycling pathway.
Probab=99.80 E-value=7.7e-20 Score=142.95 Aligned_cols=69 Identities=38% Similarity=0.574 Sum_probs=62.8
Q ss_pred EEEeecccCCCchhHHHHHHHHHHHHHhcCCChHHHHhhccceEEEEeccCcccchhhhccCCCCCCCCCCCCCCccccC
Q psy11075 103 FKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAHGVDL 182 (195)
Q Consensus 103 v~i~~g~Hg~E~~g~~~~l~~~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDl 182 (195)
|+|+||+||+|+.|..+++.+++.|+.. .|++.+|+|||++||||++.. +|.|++|+||
T Consensus 1 vli~agiHG~E~~g~~~~~~l~~~l~~~---------~l~~~~i~ivP~~NPdG~~~~------------~R~n~~gvDL 59 (178)
T cd06904 1 VLIIGGIHGDEPASVSDLEELLRILPGL---------ILRGLSWYVIPVLNPDGLLRA------------TRCNANGVDL 59 (178)
T ss_pred CEEEeccCCCCHHHHHHHHHHHHHHHHH---------hhcCCeEEEEeCcCccHHhhC------------cccCCCCcCh
Confidence 6899999999999999999999999863 277899999999999999984 7899999999
Q ss_pred CCCCCcCCCc
Q psy11075 183 NRNFPDQFEY 192 (195)
Q Consensus 183 NRnf~~~w~~ 192 (195)
|||||+.|.+
T Consensus 60 NRnFp~~~~~ 69 (178)
T cd06904 60 NRNFPTKDWP 69 (178)
T ss_pred hhcCCccccc
Confidence 9999998854
No 48
>cd00596 Peptidase_M14_like The M14 family of metallocarboxypeptidases (MCPs) are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring
Probab=99.79 E-value=1.3e-19 Score=143.32 Aligned_cols=75 Identities=45% Similarity=0.774 Sum_probs=67.7
Q ss_pred EEEeecccCCCchhHHHHHHHHHHHHHhcCCChHHHHhhccceEEEEeccCcccchhhhccCCCCCCCCCCCCCCccccC
Q psy11075 103 FKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAHGVDL 182 (195)
Q Consensus 103 v~i~~g~Hg~E~~g~~~~l~~~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDl 182 (195)
|+|+||+||+|+.|+++++.++++|+..+... +.++++.+|+|+|++||||++.. .+|.|.+|+||
T Consensus 1 v~i~ag~Hg~E~~g~~~~~~~~~~l~~~~~~~---~~l~~~~~i~iiP~~NPdG~~~~-----------~~R~n~~g~Dl 66 (196)
T cd00596 1 VLIIAGIHGNETIGVEAALALLRRLLSNYGRD---TKLLENGRLLVVPVLNPDGYEAV-----------NWRKNANGVDL 66 (196)
T ss_pred CEEECCcCCCcHHHHHHHHHHHHHHHHcCcch---HHHHhCCeEEEEeCcccccceee-----------eEEeCCCCcCc
Confidence 68999999999999999999999999865322 88999999999999999999983 17999999999
Q ss_pred CCCCCcCCC
Q psy11075 183 NRNFPDQFE 191 (195)
Q Consensus 183 NRnf~~~w~ 191 (195)
||||+..|.
T Consensus 67 NR~f~~~~~ 75 (196)
T cd00596 67 NRNFPGLWG 75 (196)
T ss_pred cCCCCCccc
Confidence 999999985
No 49
>cd06233 Peptidase_M14-like_6 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The
Probab=99.66 E-value=6.6e-16 Score=128.09 Aligned_cols=119 Identities=24% Similarity=0.269 Sum_probs=93.0
Q ss_pred CCHHHHHHHHHHHHHHCCCcEEEEEccc-cCCCc--eeeEEEEeecCCCCCCCCCCcceEEEeecccCCC-chhHHHHHH
Q psy11075 47 YNSTELDAFILKTVKSYPHLVRAETIGK-SVQGR--NLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDE-TVGYALMVF 122 (195)
Q Consensus 47 ~t~~ei~~~l~~l~~~~p~~v~~~~iG~-S~~Gr--~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E-~~g~~~~l~ 122 (195)
.+|++-.+.+.+.+++..-.++...+.. -..|. +|+++.++.. ...+++++++|+||.| .+|+.+++.
T Consensus 3 ~sY~eAR~kFl~aA~~aga~~~~~~~~~~gp~g~~l~i~v~~~g~~--------~~~~~l~i~sGvHG~Eg~~Gs~~~~~ 74 (283)
T cd06233 3 QSYAEAREKFLAAAKAAGAALESYVHPLLGPDGEALAIDVARLGPA--------DAKRLLVITSGTHGVEGFCGSAIQLA 74 (283)
T ss_pred ccHHHHHHHHHHHHHHcCccceeeeccCCCCCCceeeeeEEEEcCC--------CCCcEEEEEecccCCcccchHHHHHH
Confidence 4789999999988887655455544432 22343 5888888773 2356999999999999 799999999
Q ss_pred HHHHHHHhcCCChHHHHhhccceEEEEeccCcccchhhhccCCCCCCCCCCCCCCccccCCCCCCcCCCcc
Q psy11075 123 LIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAHGVDLNRNFPDQFEYE 193 (195)
Q Consensus 123 ~~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w~~~ 193 (195)
+++++.. ..+..+..+++||++||.|+... .|.|.+||||||||....++-
T Consensus 75 ll~~~~~--------~~~~~~~~vi~vh~vNP~Gf~~~------------~R~nedgvDLNRnf~d~~~~~ 125 (283)
T cd06233 75 LLRELLP--------RSLPAGVAVLLVHALNPYGFAHL------------RRVNENNVDLNRNFLDFSAPL 125 (283)
T ss_pred HHHhcch--------hhccCCceEEEEeCcCHHHHhhc------------ccCCCCCCChhhcccccCCCC
Confidence 9988764 24556889999999999999875 789999999999998876653
No 50
>KOG3641|consensus
Probab=99.61 E-value=9e-16 Score=134.50 Aligned_cols=132 Identities=23% Similarity=0.270 Sum_probs=115.2
Q ss_pred ccCCCCCCCCCCHHHHHHHHHHHHHHCC--CcEEEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCc
Q psy11075 37 DSAGIDLQRYYNSTELDAFILKTVKSYP--HLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDET 114 (195)
Q Consensus 37 ~~~~~~~~~y~t~~ei~~~l~~l~~~~p--~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~ 114 (195)
....++|...+||..+.-+++.|++..+ -..+...+++|..||++.+++|+.. ....+|.|+++|.+|++|.
T Consensus 370 d~cyfaYhypyTy~~l~~hLn~les~~~~~~yfr~dVl~~tl~g~~~~l~tI~~a------e~~~~~~IfLSaRVHpgeT 443 (650)
T KOG3641|consen 370 DTCYFAYHYPYTYSQLQCHLNGLESPKNPAFYFRYDVLLFTLVGRAMALATIDMA------ECAPRPVIFLSARVHPGET 443 (650)
T ss_pred ceEEEeeccCccHHHHHhhhhcccCCCCcCcccchheeeeeecCCccceEEeeHh------hcCCcceEEEecccCCCCC
Confidence 5566899999999999999999998655 2577888999999999999999942 2346899999999999999
Q ss_pred hhHHHHHHHHHHHHHhcCCChHHHHhhccceEEEEeccCcccchhhhccCCCCCCCCCCCCCCccccCCCCCCc
Q psy11075 115 VGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAHGVDLNRNFPD 188 (195)
Q Consensus 115 ~g~~~~l~~~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~ 188 (195)
.+.+++-.+++.|.. .++.+..|.+.+.|.|+||+||||.... +.|+.-.|.||||-|..
T Consensus 444 nsSwvmkGilefl~s---~~p~aq~LRe~~vFKI~PMLNPDGV~~G-----------nyRCSL~G~DLNR~w~t 503 (650)
T KOG3641|consen 444 NSSWVMKGILEFLVS---NSPLAQGLRESYVFKIVPMLNPDGVIVG-----------NYRCSLMGLDLNRMWST 503 (650)
T ss_pred cHHHHHHHHHHHhhc---CCcHHHhhhhheeEecccccCCCceecc-----------cceeccccchhhhhcCC
Confidence 999999999999986 5677788999999999999999998775 47999999999999865
No 51
>COG2866 Predicted carboxypeptidase [Amino acid transport and metabolism]
Probab=99.50 E-value=4e-14 Score=122.11 Aligned_cols=103 Identities=35% Similarity=0.531 Sum_probs=80.3
Q ss_pred cEEEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHHHHHHHHHhcCC-ChHHHHhhccc
Q psy11075 66 LVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGK-DDRITKLLNST 144 (195)
Q Consensus 66 ~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~~~~L~~~~~~-d~~~~~ll~~~ 144 (195)
++....+|+|.+||+...+..... ...+++++++++.|++ |..++..++..|+..+.+ +..++.+++++
T Consensus 120 ~~~~~~~g~sv~GR~~~~i~~~~~-------~~~~~~i~~~~~~H~~---g~~~~~~~~~~li~r~~~~~~~~~~lld~~ 189 (374)
T COG2866 120 LVELELIGRSVEGRDDPLITFPES-------NPEHKTILITAGQHAR---GEKMVEWFLYNLILRYLDPDVQVRKLLDRA 189 (374)
T ss_pred cceeeecCccccccccceeeecCC-------CCccceeeEecccccC---ccHHHHHHHHHHHHHhcCccchhhhhhccc
Confidence 567888999999995333333321 2357899999999996 555555666666665533 47889999999
Q ss_pred eEEEEeccCcccchhhhccCCCCCCCCCCCCCCccccCCCCCCcC
Q psy11075 145 DIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAHGVDLNRNFPDQ 189 (195)
Q Consensus 145 ~l~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~ 189 (195)
.++++|.+||||+++.. .|.|++|+||||+|+..
T Consensus 190 ~~~vvp~~NpDG~~~~~-----------lr~na~~~dLnr~~~~~ 223 (374)
T COG2866 190 DLHVVPNVNPDGSDLGN-----------LRTNANGVDLNRNFIAP 223 (374)
T ss_pred cEEEecccCCchhhhcc-----------cccccCccchhhhccCC
Confidence 99999999999999973 69999999999999664
No 52
>cd06250 M14_PaAOTO_like An uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the the M14 family of metallocarboxypeptidases. This subgroup includes Pseudomonas aeruginosa AotO and related proteins. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD. The gene encoding
Probab=99.43 E-value=5.6e-13 Score=114.71 Aligned_cols=99 Identities=28% Similarity=0.434 Sum_probs=72.9
Q ss_pred EccccCCC--ceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHHHHHHHHHhcCCChHHHHhhccceEEE
Q psy11075 71 TIGKSVQG--RNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYI 148 (195)
Q Consensus 71 ~iG~S~~G--r~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~~~~L~~~~~~d~~~~~ll~~~~l~i 148 (195)
.++++..| +.|++.+++.. ...|+|+|+||+||+|+.|..++..+++.|......+ -+ +-++++
T Consensus 4 ~~~~~~~g~~~~ipv~~~~g~--------~~gp~v~i~agiHGdE~~G~~~~~~L~~~l~~~~~~~-----~l-~G~v~i 69 (359)
T cd06250 4 PLPSPAPGTERELTVFRFGGA--------GAGPKVYIQASLHADELPGMLVLHHLIELLKKLEAEG-----RI-LGEITL 69 (359)
T ss_pred ecccCCCCCeEEEEEEEEeCC--------CCCCEEEEEeccccCchHHHHHHHHHHHHHhhhcccc-----cc-CceEEE
Confidence 44556566 46888888752 1258999999999999999999999999998642111 13 447999
Q ss_pred EeccCcccchhhhccCCCCCCCCCCCCC-CccccCCCCCCcC
Q psy11075 149 VPSINPDGFAAAKEGKCDSLDGYVGRKN-AHGVDLNRNFPDQ 189 (195)
Q Consensus 149 iP~~NPDG~~~~~~~~~~~~~~~~~r~n-~~GvDlNRnf~~~ 189 (195)
||++||+|++....... .+|.+ ..|.||||.||..
T Consensus 70 vP~~Np~g~~~~~~~~~------~~R~~p~dg~dlNR~FPg~ 105 (359)
T cd06250 70 VPVANPIGLNQRLGGFH------LGRFDLASGTNFNRDFPDL 105 (359)
T ss_pred EeCcChHHHHhhccccc------cccccCCCCCccCcCCCCc
Confidence 99999999977432211 24544 5899999999974
No 53
>cd06255 M14_ASTE_ASPA_like_5 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=99.29 E-value=7.5e-12 Score=105.06 Aligned_cols=86 Identities=28% Similarity=0.377 Sum_probs=67.3
Q ss_pred cccCCCce--eeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHHHHHHHHHhcCCChHHHHhhccceEEEEe
Q psy11075 73 GKSVQGRN--LWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVP 150 (195)
Q Consensus 73 G~S~~Gr~--i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~~~~L~~~~~~d~~~~~ll~~~~l~iiP 150 (195)
++...|.+ |+++.+... ...|+++|+||+||+|..|.+++..+++.|... .+ +-.++++|
T Consensus 3 ~~~~~g~~~~~pv~~~~g~--------~~gp~v~i~agvHG~E~~G~~~~~~l~~~l~~~---------~~-~g~~~~vp 64 (293)
T cd06255 3 GTMADGSAVALPVTILRGA--------EPGPTLWLHAQVHGNEYNGTQAIVDLYRSLDPA---------AL-KGRLVALP 64 (293)
T ss_pred ccCCCCCccceeEEEEeCC--------CCCCEEEEEcccCCCcHHHHHHHHHHHHhCCHh---------hc-CCeEEEEe
Confidence 45556665 666667652 234899999999999999999999999887431 12 34778999
Q ss_pred ccCcccchhhhccCCCCCCCCCCCCCC-ccccCCCCCCc
Q psy11075 151 SINPDGFAAAKEGKCDSLDGYVGRKNA-HGVDLNRNFPD 188 (195)
Q Consensus 151 ~~NPDG~~~~~~~~~~~~~~~~~r~n~-~GvDlNRnf~~ 188 (195)
++||.|+... .|.+. .+.||||.||-
T Consensus 65 ~~N~~a~~~~------------~R~~p~d~~dlNR~fpg 91 (293)
T cd06255 65 TANPTALDAR------------TRMSPFDELDLNRTFPG 91 (293)
T ss_pred CcCHHHHHhh------------cccCCCCCCCcccCCCC
Confidence 9999999875 67776 89999999985
No 54
>cd06251 M14_ASTE_ASPA_like_1 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=99.27 E-value=6.7e-12 Score=105.07 Aligned_cols=82 Identities=28% Similarity=0.335 Sum_probs=64.4
Q ss_pred eeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHHHHHHHHHhcCCChHHHHhhccceEEEEeccCcccchh
Q psy11075 80 NLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAA 159 (195)
Q Consensus 80 ~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~ 159 (195)
.|+++.+... ...|+++|+||+||+|+.|..++..+++.|... . .+-+++++|++||.|+..
T Consensus 8 ~~pv~~~~g~--------~~gp~v~i~~giHGdE~~G~~~~~~l~~~l~~~---------~-~~g~v~~vp~~Np~a~~~ 69 (287)
T cd06251 8 SIPVHVIRGK--------KPGPTLLLTAAIHGDELNGVEIIRRLLRQLDPK---------T-LRGTVIAVPVVNVFGFLN 69 (287)
T ss_pred eeeEEEEeCC--------CCCCEEEEEcCccCCchhHHHHHHHHHhcCCcc---------c-CceEEEEEeCCCHHHHHh
Confidence 3577777662 134899999999999999999999888877431 1 234788999999999987
Q ss_pred hhccCCCCCCCCCCCCCCccccCCCCCCcCCC
Q psy11075 160 AKEGKCDSLDGYVGRKNAHGVDLNRNFPDQFE 191 (195)
Q Consensus 160 ~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w~ 191 (195)
. .|.+..|.||||+||-...
T Consensus 70 ~------------~R~~~d~~dlNR~fpg~~~ 89 (287)
T cd06251 70 Q------------SRYLPDRRDLNRSFPGSKN 89 (287)
T ss_pred c------------cccCCCccCHhhcCCCCCC
Confidence 5 5777789999999986543
No 55
>PF10994 DUF2817: Protein of unknown function (DUF2817); InterPro: IPR021259 This family of proteins has no known function.
Probab=99.19 E-value=1.6e-10 Score=98.51 Aligned_cols=116 Identities=22% Similarity=0.231 Sum_probs=89.7
Q ss_pred CCHHHHHHHHHHHHHHCCCcEEEEEccc-cCCCc--eeeEEEEeecCCCCCCCCCCcceEEEeecccCCC-chhHHHHHH
Q psy11075 47 YNSTELDAFILKTVKSYPHLVRAETIGK-SVQGR--NLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDE-TVGYALMVF 122 (195)
Q Consensus 47 ~t~~ei~~~l~~l~~~~p~~v~~~~iG~-S~~Gr--~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E-~~g~~~~l~ 122 (195)
.+|++-.+.+.+.+++.+-.++...+-. -.+|. .+.+..+++. ..+..+++++|.||=| ..|+.+-..
T Consensus 3 ~sY~~AR~~Fl~aA~~~ga~~~~~~~p~~G~~ge~L~~Dva~lg~~--------~a~~lLv~~SGtHGVEGf~GSaiQ~~ 74 (341)
T PF10994_consen 3 QSYAEARERFLAAAEAAGAKLESYPHPLRGPDGEDLATDVAWLGPK--------DASRLLVLTSGTHGVEGFAGSAIQIA 74 (341)
T ss_pred ccHHHHHHHHHHHHHHcCCcceeeeCCCCCCCCCcceeEEEEecCC--------CCCeEEEEEecCCcccccccHHHHHH
Confidence 4789999999999888776556555532 24444 4666677762 2345899999999999 778877788
Q ss_pred HHHHHHHhcCCChHHHHhhccceEEEEeccCcccchhhhccCCCCCCCCCCCCCCccccCCCCCCcCC
Q psy11075 123 LIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAHGVDLNRNFPDQF 190 (195)
Q Consensus 123 ~~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w 190 (195)
+++.... ..+.+++.+++|-.+||.|+.+. .|.|.++|||||||-...
T Consensus 75 ~L~~~~~--------~~~~~~~avllVHAlNPyGfa~~------------RR~nE~NVDLNRNfldf~ 122 (341)
T PF10994_consen 75 LLREDLA--------RSLPAGVAVLLVHALNPYGFAWL------------RRVNENNVDLNRNFLDFS 122 (341)
T ss_pred HHHcccc--------cccCCCCeEEEEEccCcccccee------------eccCCcCcCcccccCccc
Confidence 8877632 45667899999999999999986 799999999999998543
No 56
>cd06254 M14_ASTE_ASPA_like_4 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=99.18 E-value=4.5e-11 Score=100.11 Aligned_cols=83 Identities=25% Similarity=0.253 Sum_probs=64.5
Q ss_pred ceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHHHHHHHHHhcCCChHHHHhhccceEEEEeccCcccch
Q psy11075 79 RNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFA 158 (195)
Q Consensus 79 r~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~ 158 (195)
-.+++.++... ...|+|+|+||+||+|..|..++..+++.|-.. . .+-.++++|++||.|+.
T Consensus 4 ~~~pv~~~~g~--------~~gp~v~i~agvHG~E~~G~~~~~~l~~~l~~~---------~-~~g~v~~vp~~N~~a~~ 65 (288)
T cd06254 4 LAIPVTLINGV--------NPGPTLAITAGVHGGEYPGIQALQKLAREIDPA---------K-LSGTLIIVHVLNLSGFY 65 (288)
T ss_pred ccccEEEEeCC--------CCCCEEEEEecccCCchhHHHHHHHHHHhCCcc---------c-CeEEEEEEeCcCHHHHH
Confidence 35677777763 235899999999999999999999998887321 1 25679999999999988
Q ss_pred hhhccCCCCCCCCCCC--CCCccccCCCCCCcCCC
Q psy11075 159 AAKEGKCDSLDGYVGR--KNAHGVDLNRNFPDQFE 191 (195)
Q Consensus 159 ~~~~~~~~~~~~~~~r--~n~~GvDlNRnf~~~w~ 191 (195)
.. .| ....|.||||.||....
T Consensus 66 ~~------------~r~~~~~d~~dlNR~fpg~~~ 88 (288)
T cd06254 66 AR------------TPYIVPEDGKNLNRVFPGDKD 88 (288)
T ss_pred hc------------CcccCCCCCCchhhcCCCCCC
Confidence 64 23 34588999999997654
No 57
>cd06230 M14_ASTE_ASPA_like The Peptidase M14 Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily belongs to the M14 family of metallocarboxypeptidases (MCPs), and includes ASTE, which catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) which cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=99.15 E-value=5e-11 Score=98.01 Aligned_cols=65 Identities=29% Similarity=0.363 Sum_probs=54.5
Q ss_pred EEEeecccCCCchhHHHHHHHHHHHHHhcCCChHHHHhhccceEEEEeccCcccchhhhccCCCCCCCCCCCCCCccccC
Q psy11075 103 FKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAHGVDL 182 (195)
Q Consensus 103 v~i~~g~Hg~E~~g~~~~l~~~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDl 182 (195)
|+|+||+||+|..|.+++..+++++.... ..+.+++++|++||+|+... .|.+. .||
T Consensus 1 v~i~agiHG~E~~g~~~~~~l~~~~~~~~---------~l~g~v~~vp~~N~~g~~~~------------~R~~~--~DL 57 (252)
T cd06230 1 VAVVGGVHGNEPCGVQAIRRLLAELDEGQ---------ALRGPVKLVPAANPLALEAG------------QRYLD--RDL 57 (252)
T ss_pred CEEEcccCCCcHHHHHHHHHHHHHHhhhc---------ccccEEEEEeCcCHHHHHhC------------CCCCC--cCC
Confidence 58999999999999999999999887521 23567899999999999875 56655 999
Q ss_pred CCCCCcCC
Q psy11075 183 NRNFPDQF 190 (195)
Q Consensus 183 NRnf~~~w 190 (195)
||+|+..-
T Consensus 58 NR~fpg~~ 65 (252)
T cd06230 58 NRIFPGDP 65 (252)
T ss_pred CCCCCCCC
Confidence 99999754
No 58
>cd06252 M14_ASTE_ASPA_like_2 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=99.09 E-value=2.2e-10 Score=97.22 Aligned_cols=83 Identities=24% Similarity=0.280 Sum_probs=66.5
Q ss_pred CceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHHHHHHHHHhcCCChHHHHhhccceEEEEeccCcccc
Q psy11075 78 GRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGF 157 (195)
Q Consensus 78 Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~ 157 (195)
.-.|++.+|... . -|+|+|+||+||+|..|..++..++++|... . .+-.++++|++||-|+
T Consensus 21 ~~~iPv~v~~g~--------~-gp~v~I~aGiHGdE~~G~~~~~~L~~~l~~~---------~-l~G~vi~vP~~Np~a~ 81 (316)
T cd06252 21 TVMIPITVIKNG--------D-GPTVLLTGGNHGDEYEGQIALLRLARRLDPE---------E-VRGRVIILPALNFPAV 81 (316)
T ss_pred ceEeeEEEEeCC--------C-CCEEEEEccCCCCchHHHHHHHHHHHhCChh---------h-CeEEEEEEeCCCHHHH
Confidence 457888888763 1 4799999999999999999999999887431 1 2458999999999999
Q ss_pred hhhhccCCCCCCCCCCCCCC-ccccCCCCCCcCCC
Q psy11075 158 AAAKEGKCDSLDGYVGRKNA-HGVDLNRNFPDQFE 191 (195)
Q Consensus 158 ~~~~~~~~~~~~~~~~r~n~-~GvDlNRnf~~~w~ 191 (195)
... .|.+. .|.||||.||...+
T Consensus 82 ~~~------------~R~~p~D~~DLNR~Fpg~~~ 104 (316)
T cd06252 82 QAG------------TRTSPIDGGNLNRVFPGDPD 104 (316)
T ss_pred Hhc------------cccCCCCCCcHHhhCCCCCC
Confidence 775 57664 58999999997544
No 59
>cd06253 M14_ASTE_ASPA_like_3 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=99.06 E-value=3.5e-10 Score=95.22 Aligned_cols=74 Identities=28% Similarity=0.451 Sum_probs=59.3
Q ss_pred cceEEEeecccCCCchhHHHHHHHHHHHHHhcCCChHHHHhhccceEEEEeccCcccchhhhccCCCCCCCCCCCCCC-c
Q psy11075 100 KPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNA-H 178 (195)
Q Consensus 100 k~~v~i~~g~Hg~E~~g~~~~l~~~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~-~ 178 (195)
.|+|+|+||+||+|..|..++..+++.|....... ...-+-++++||++||.|+... .|.+. .
T Consensus 19 gp~v~i~agvHGdE~~G~~~~~~L~~~l~~~~~~~----~~~l~g~v~~vP~~N~~a~~~~------------~R~~p~d 82 (298)
T cd06253 19 EKRICIVGGIHGDELQGLYICSLLIRFLKELEKRG----PLKLNGIVDVIPSVNPLGLNLG------------TRFWPTD 82 (298)
T ss_pred CcEEEEEccCccchHHHHHHHHHHHHHHhhhhccc----ccccCceEEEEeCcCHHHHHHh------------hCcCCCC
Confidence 58999999999999999999999999997531100 1123778999999999998875 56553 6
Q ss_pred cccCCCCCCcC
Q psy11075 179 GVDLNRNFPDQ 189 (195)
Q Consensus 179 GvDlNRnf~~~ 189 (195)
|.||||.||..
T Consensus 83 ~~dlNR~Fpg~ 93 (298)
T cd06253 83 NSDINRMFPGD 93 (298)
T ss_pred CCcccccCCCC
Confidence 89999999964
No 60
>PF04952 AstE_AspA: Succinylglutamate desuccinylase / Aspartoacylase family; InterPro: IPR007036 This family describes both succinylglutamate desuccinylase that catalyses the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway and also includes aspartoacylase 3.5.1.15 from EC which cleaves acylaspartate into a fatty acid and aspartate. Mutations in P45381 from SWISSPROT lead to Canavan disease [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0008152 metabolic process; PDB: 3CDX_A 3FMC_A 3NA6_A 2BCO_B 3B2Y_A 3LWU_A 3IEH_A 2QVP_B 2G9D_A 1YW4_A ....
Probab=99.05 E-value=3e-10 Score=94.90 Aligned_cols=67 Identities=36% Similarity=0.510 Sum_probs=56.1
Q ss_pred ceEEEeecccCCCchhHHHHHHHHHHHHHhcCCChHHHHhhccceEEEEeccCcccchhhhccCCCCCCCCCCCCCC-cc
Q psy11075 101 PMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNA-HG 179 (195)
Q Consensus 101 ~~v~i~~g~Hg~E~~g~~~~l~~~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~-~G 179 (195)
|+++|+||+||+|+.|..++..++++|.... .+-.++++|+.||.|+... .|... .|
T Consensus 3 p~l~i~agvHGnE~~G~~a~~~L~~~l~~~~----------~~G~~~~vp~~N~~a~~~~------------~R~~~~d~ 60 (292)
T PF04952_consen 3 PTLLITAGVHGNEYNGIEALQRLLRELDPAD----------LSGTVIIVPVANPPAFRQG------------TRFVPIDG 60 (292)
T ss_dssp -EEEEEE-SSTTBCHHHHHHHHHHHHHHGGG----------CTCEEEEEEESSHHHHHHT------------SSSSTTTS
T ss_pred CEEEEEcCcccChHHHHHHHHHHHhcchhcc----------cCCceEEEEEeCHHHHHhc------------cccCCCCC
Confidence 7999999999999999999999999986531 3568999999999999986 46555 89
Q ss_pred ccCCCCCCcC
Q psy11075 180 VDLNRNFPDQ 189 (195)
Q Consensus 180 vDlNRnf~~~ 189 (195)
.||||.|+-.
T Consensus 61 ~dLNR~Fpg~ 70 (292)
T PF04952_consen 61 RDLNRCFPGD 70 (292)
T ss_dssp SBGGGSTTHH
T ss_pred CCHHHhCCCC
Confidence 9999999853
No 61
>TIGR02994 ectoine_eutE ectoine utilization protein EutE. Members of this family, part of the succinylglutamate desuccinylase / aspartoacylase family (pfam04952), belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it the operon is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida.
Probab=99.00 E-value=8.6e-10 Score=93.82 Aligned_cols=80 Identities=29% Similarity=0.333 Sum_probs=62.1
Q ss_pred ceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHHHHHHHHHhcCCChHHHHhhccceEEEEeccCcccch
Q psy11075 79 RNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFA 158 (195)
Q Consensus 79 r~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~ 158 (195)
-.|++..|... ..|+++|+||+||+|..|..++..+++.|-.. . -+-++++||++||-|+.
T Consensus 35 ~~ipv~vi~~~---------~gp~v~i~agvHGdE~~G~~~~~~L~~~l~~~---------~-l~G~v~~vP~~N~~g~~ 95 (325)
T TIGR02994 35 VMIPITVIKNG---------IGPTALLTGGNHGDEYEGPIALFELARTLDAE---------D-VSGRIIIVPAMNYPAFR 95 (325)
T ss_pred EEeeEEEEeCC---------CCCEEEEEeccCCCchHHHHHHHHHHhhCChh---------h-CcEEEEEEcCCCHHHHH
Confidence 35666666541 24899999999999999999999999888431 1 24569999999999987
Q ss_pred hhhccCCCCCCCCCCCCCC-ccccCCCCCCcC
Q psy11075 159 AAKEGKCDSLDGYVGRKNA-HGVDLNRNFPDQ 189 (195)
Q Consensus 159 ~~~~~~~~~~~~~~~r~n~-~GvDlNRnf~~~ 189 (195)
.. .|.+. .|.||||.||-.
T Consensus 96 ~~------------~r~~p~d~~nlNR~fPG~ 115 (325)
T TIGR02994 96 AG------------TRTSPIDRGNLNRSFPGR 115 (325)
T ss_pred hh------------CCCCCCCCCccCCCCCCC
Confidence 75 45443 789999999853
No 62
>COG3608 Predicted deacylase [General function prediction only]
Probab=98.70 E-value=3.4e-08 Score=83.37 Aligned_cols=67 Identities=37% Similarity=0.494 Sum_probs=56.3
Q ss_pred CcceEEEeecccCCCchhHHHHHHHHHHHHHhcCCChHHHHhhccceEEEEeccCcccchhhhccCCCCCCCCCCCCCC-
Q psy11075 99 MKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNA- 177 (195)
Q Consensus 99 ~k~~v~i~~g~Hg~E~~g~~~~l~~~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~- 177 (195)
+-|+++|+||.||+|..|+.++..++++|-.. + =.-+++|||.+||-++... +|.+.
T Consensus 47 ~gp~~~l~ag~HGdEl~G~~al~~Li~~L~~a--------~--i~GtV~iVP~aN~~a~~~~------------~R~~p~ 104 (331)
T COG3608 47 PGPSVLLQAGVHGDELPGVIALRRLIPALDPA--------D--ISGTVIIVPIANPPAFEAQ------------GRFSPG 104 (331)
T ss_pred CCCEEEEEecccccccchHHHHHHHHHhcCHh--------h--cCceEEEEeccCHHHHHhh------------cccCCC
Confidence 35899999999999999999999999999542 1 2468999999999988875 55554
Q ss_pred ccccCCCCCC
Q psy11075 178 HGVDLNRNFP 187 (195)
Q Consensus 178 ~GvDlNRnf~ 187 (195)
.+.|+||+||
T Consensus 105 d~~N~NR~fP 114 (331)
T COG3608 105 DDTNLNRAFP 114 (331)
T ss_pred CCCcccccCC
Confidence 7899999999
No 63
>PRK02259 aspartoacylase; Provisional
Probab=98.64 E-value=3.1e-08 Score=83.09 Aligned_cols=66 Identities=26% Similarity=0.198 Sum_probs=51.6
Q ss_pred ceEEEeecccCCCchhHHHHHHHHHHHHHhcCCChHHHHhhccceEEEEeccCcccchhhhccCCCCCCCCCCCCCCccc
Q psy11075 101 PMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAHGV 180 (195)
Q Consensus 101 ~~v~i~~g~Hg~E~~g~~~~l~~~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~~Gv 180 (195)
++|+|+||+||+|..|++++..+++.+... . .....+++|+.||.++... .|.. ..
T Consensus 3 ~~v~i~aGvHGnE~~Gv~~v~~l~~~~~~~--------~--~~g~~i~~~i~Np~A~~~~------------~Ry~--~~ 58 (288)
T PRK02259 3 NRVAIVGGTHGNEITGIYLVKKWQQQPNLI--------N--RKGLEVQTVIGNPEAIEAG------------RRYI--DR 58 (288)
T ss_pred cEEEEEcCccCChhHHHHHHHHHHhccccc--------c--cCccEEEEEeeCHHHHHhC------------CCCC--cc
Confidence 579999999999999999998888776431 1 2345678899999998875 4543 37
Q ss_pred cCCCCCCcCC
Q psy11075 181 DLNRNFPDQF 190 (195)
Q Consensus 181 DlNRnf~~~w 190 (195)
||||.|+-..
T Consensus 59 DLNR~Fpg~~ 68 (288)
T PRK02259 59 DLNRSFRLDL 68 (288)
T ss_pred cCCCCCCCcc
Confidence 9999999753
No 64
>cd06256 M14_ASTE_ASPA_like_6 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=98.62 E-value=6.3e-08 Score=82.50 Aligned_cols=67 Identities=22% Similarity=0.283 Sum_probs=52.4
Q ss_pred ceEEEeecccCCCchhHHHHHHHHHHHHHhcCCChHHHHhhccceEEEEeccCcccchhhhccCCCCCCCCCCCCCCccc
Q psy11075 101 PMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAHGV 180 (195)
Q Consensus 101 ~~v~i~~g~Hg~E~~g~~~~l~~~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~~Gv 180 (195)
|+|+|+||+||+|..|.+++..+++++-.. . +... .++++.||-++... .|....|.
T Consensus 35 p~v~I~aGvHGNE~~Gi~al~~ll~~~~~~--------~-~~~~--~~l~i~Np~A~~~~------------~R~~~d~~ 91 (327)
T cd06256 35 PPLFVSTLLHGNEPTGLQAVQRLLKALEAR--------P-LPRS--LLLFIGNVAAALAG------------VRRLDGQP 91 (327)
T ss_pred CeEEEEccccCCcHHHHHHHHHHHHhCChh--------h-cCCc--EEEEEeCHHHHHhC------------cccCCCCC
Confidence 799999999999999999999888877431 1 2333 44556999999764 56666688
Q ss_pred cCCCCCCcCC
Q psy11075 181 DLNRNFPDQF 190 (195)
Q Consensus 181 DlNRnf~~~w 190 (195)
||||.|+-..
T Consensus 92 DLNR~Fpg~~ 101 (327)
T cd06256 92 DYNRCWPGPY 101 (327)
T ss_pred CccCCCCCCC
Confidence 9999999654
No 65
>PRK05324 succinylglutamate desuccinylase; Provisional
Probab=98.60 E-value=7.5e-08 Score=82.12 Aligned_cols=71 Identities=27% Similarity=0.293 Sum_probs=54.0
Q ss_pred CcceEEEeecccCCCchhHHHHHHHHHHHHHhcCCChHHHHhhccceEEEEeccCcccchhhhccCCCCCCCCCCCCCCc
Q psy11075 99 MKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAH 178 (195)
Q Consensus 99 ~k~~v~i~~g~Hg~E~~g~~~~l~~~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~~ 178 (195)
..|.|+|+||+||+|..|.+++..+++.+.... + ....-+++|+.||.++... .|..
T Consensus 46 ~gp~v~IsaGvHGNE~~Gi~~l~~Ll~~l~~~~--------~-~~~~~v~~i~~Np~A~~~~------------~R~v-- 102 (329)
T PRK05324 46 STKALVLSAGIHGNETAPIELLDQLVRDLLAGE--------L-PLRARLLVILGNPPAMRAG------------KRYL-- 102 (329)
T ss_pred CCCeEEEECCcccCcHHHHHHHHHHHHhhhccc--------c-ccCceEEEEecCHHHHHhC------------cccC--
Confidence 457999999999999999999999999887521 1 1122355568999999874 4544
Q ss_pred cccCCCCCCcCCCc
Q psy11075 179 GVDLNRNFPDQFEY 192 (195)
Q Consensus 179 GvDlNRnf~~~w~~ 192 (195)
..||||.|+-.+..
T Consensus 103 d~DLNR~FpG~~~~ 116 (329)
T PRK05324 103 DEDLNRLFGGRHQQ 116 (329)
T ss_pred CCCcccCCCCCcCC
Confidence 46999999977653
No 66
>cd06909 M14_ASPA Aspartoacylase (ASPA) belongs to the Succinylglutamate desuccinylase/aspartoacylase subfamily of the M14 family of metallocarboxypeptidases. ASPA (also known as aminoacylase 2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=98.60 E-value=5.2e-08 Score=81.41 Aligned_cols=67 Identities=25% Similarity=0.173 Sum_probs=50.7
Q ss_pred ceEEEeecccCCCchhHHHHHHHHHHHHHhcCCChHHHHhhccceEEEEeccCcccchhhhccCCCCCCCCCCCCCCccc
Q psy11075 101 PMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAHGV 180 (195)
Q Consensus 101 ~~v~i~~g~Hg~E~~g~~~~l~~~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~~Gv 180 (195)
+.|+|+||+||+|..|++++..+++.+... .......+.|+.||.++... .|.. ..
T Consensus 1 ~~v~I~aGvHGnE~~Gv~~v~~l~~~~~~~----------~~~~~~v~~~i~Np~A~~~~------------~Ry~--d~ 56 (282)
T cd06909 1 KRVAIVGGTHGNELTGVYLVKKWLQQPELI----------QRPSLEVHPVIANPRAVEAC------------RRYI--DT 56 (282)
T ss_pred CeEEEEcCccCChHHHHHHHHHHHhccccc----------ccCCeEEEEEecCHHHHHhC------------CccC--CC
Confidence 369999999999999999998888776431 12334566677899998764 5644 58
Q ss_pred cCCCCCCcCCC
Q psy11075 181 DLNRNFPDQFE 191 (195)
Q Consensus 181 DlNRnf~~~w~ 191 (195)
||||.|+-...
T Consensus 57 DLNR~Fpg~~~ 67 (282)
T cd06909 57 DLNRCFTLENL 67 (282)
T ss_pred CCCCCCCCCcc
Confidence 99999997543
No 67
>TIGR03242 arg_catab_astE succinylglutamate desuccinylase. Members of this protein family are succinylglutamate desuccinylase, the fifth and final enzyme of the arginine succinyltransferase (AST) pathway for arginine catabolism. This model excludes the related protein aspartoacylase.
Probab=98.55 E-value=9.7e-08 Score=81.16 Aligned_cols=69 Identities=23% Similarity=0.305 Sum_probs=52.2
Q ss_pred CcceEEEeecccCCCchhHHHHHHHHHHHHHhcCCChHHHHhhccceEEEEeccCcccchhhhccCCCCCCCCCCCCCCc
Q psy11075 99 MKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAH 178 (195)
Q Consensus 99 ~k~~v~i~~g~Hg~E~~g~~~~l~~~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~~ 178 (195)
.-|.|+|+||+||+|..|.+++..+++.+... .+.-+..+.++ +.||.++... .|..
T Consensus 40 ~gp~v~IsaGvHGNE~~Gi~~l~~ll~~l~~~--------~~~~~~~l~~i-~~Np~A~~~~------------~R~~-- 96 (319)
T TIGR03242 40 PQKSLVISAGIHGNETAPIEILEQLLGDIAAG--------KLPLRVRLLVI-LGNPPAMRTG------------KRYL-- 96 (319)
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHhhhhhc--------cccCCceEEEE-EcCHHHHHhC------------cccC--
Confidence 35789999999999999999999999988642 11123445444 7999999864 4543
Q ss_pred cccCCCCCCcCC
Q psy11075 179 GVDLNRNFPDQF 190 (195)
Q Consensus 179 GvDlNRnf~~~w 190 (195)
..||||.|+-..
T Consensus 97 ~~DLNR~FpG~~ 108 (319)
T TIGR03242 97 HDDLNRMFGGRY 108 (319)
T ss_pred CCCccCCCCCcc
Confidence 369999999655
No 68
>cd06910 M14_ASTE_ASPA_like_7 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.
Probab=98.55 E-value=1e-07 Score=79.34 Aligned_cols=66 Identities=20% Similarity=0.200 Sum_probs=48.4
Q ss_pred ceEEEeecccCCCchhHHHHHHHHHHHHHhcCCChHHHHhhccceEEEEeccCcccchhhhccCCCCCCCCCCCCCC---
Q psy11075 101 PMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNA--- 177 (195)
Q Consensus 101 ~~v~i~~g~Hg~E~~g~~~~l~~~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~--- 177 (195)
|+|+|+||+||+|..|.+++..+++.- + . .+.. ++.++ +.||-++... .|.+.
T Consensus 1 P~v~isagvHGnE~~Gi~al~~l~~~~-------~--~-~l~G-~li~~-~~N~~A~~~~------------~~~~p~~~ 56 (272)
T cd06910 1 PHVMINALVHGNEICGAIALDALLREG-------L--R-PRRG-RLTLA-FANVAAYARF------------DPNNPTAS 56 (272)
T ss_pred CEEEEEcCcccChHHHHHHHHHHHhCc-------c--c-ccCC-CEEEE-EECHHHHHhc------------ccCCCccc
Confidence 789999999999999999999888631 0 1 1333 45555 7999998754 23332
Q ss_pred --ccccCCCCCCcCC
Q psy11075 178 --HGVDLNRNFPDQF 190 (195)
Q Consensus 178 --~GvDlNRnf~~~w 190 (195)
.+.||||.||-.+
T Consensus 57 R~~~~dLNR~Fpg~~ 71 (272)
T cd06910 57 RFVDEDMNRVWSPDV 71 (272)
T ss_pred ccCCCCcCCCCCCcc
Confidence 2579999999765
No 69
>cd03855 M14_ASTE Peptidase M14 Succinylglutamate desuccinylase (ASTE, also known as N-succinyl-L-glutamate amidohydrolase, N2-succinylglutamate desuccinylase, and SGDS; EC 3.5.1.96) belongs to the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily of the M14 family of metallocarboxypeptidases. This group includes succinylglutamate desuccinylase that catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway. It hydrolyzes N-succinyl-L-glutamate to succinate and L-glutamate.
Probab=98.50 E-value=3.3e-07 Score=78.04 Aligned_cols=71 Identities=24% Similarity=0.268 Sum_probs=54.0
Q ss_pred CCcceEEEeecccCCCchhHHHHHHHHHHHHHhcCCChHHHHhhccceEEEEeccCcccchhhhccCCCCCCCCCCCCCC
Q psy11075 98 LMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNA 177 (195)
Q Consensus 98 ~~k~~v~i~~g~Hg~E~~g~~~~l~~~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~ 177 (195)
...|.|+|+||+||+|..|.+++..+++.+.... +......++|+.||.++... .|..
T Consensus 40 ~~gp~v~IsaGvHGNE~~Gi~~l~~ll~~l~~~~---------l~~~~~v~~~~~Np~A~~~~------------~R~~- 97 (322)
T cd03855 40 PATKAIVISAGVHGNETAPIEILNQLIKDLLAGE---------LPLAHRLLFIFGNPPAMRAG------------ERFV- 97 (322)
T ss_pred CCCCeEEEEccccCCchhHHHHHHHHHHhhhhcc---------ccCCeEEEEEeeCHHHHHhC------------cccC-
Confidence 3457899999999999999999999999887521 11223456778999998774 4533
Q ss_pred ccccCCCCCCcCCC
Q psy11075 178 HGVDLNRNFPDQFE 191 (195)
Q Consensus 178 ~GvDlNRnf~~~w~ 191 (195)
..||||.|+-...
T Consensus 98 -d~DLNR~FpG~~~ 110 (322)
T cd03855 98 -DENLNRLFSGRHQ 110 (322)
T ss_pred -CCCccCCCCCCcc
Confidence 3599999997655
No 70
>COG2988 Succinylglutamate desuccinylase [Amino acid transport and metabolism]
Probab=97.04 E-value=0.00074 Score=56.08 Aligned_cols=69 Identities=26% Similarity=0.171 Sum_probs=48.8
Q ss_pred eEEEeecccCCCchhHHHHHHHHHHHHHhcCCChHHHHhhccceEEEEeccCcccchhhhccCCCCCCCCCCCCCCcccc
Q psy11075 102 MFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAHGVD 181 (195)
Q Consensus 102 ~v~i~~g~Hg~E~~g~~~~l~~~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvD 181 (195)
.+.|+||+||+|..+.+++-.++..+...+- | -.....+ -+-||--.... .| ..--|
T Consensus 45 ~lvIsaGiHGNEtapvEll~kl~~~~~ag~~--p------~a~r~L~-ilgNP~Ai~~g------------kR--YieqD 101 (324)
T COG2988 45 SLVISAGIHGNETAPVELLDKLQQKISAGQL--P------LAWRCLV-ILGNPPAIAAG------------KR--YIEQD 101 (324)
T ss_pred ceEEEecccCCccCcHHHHHHHHhhhhhccc--C------cceeEEE-EecCcHHHHhc------------hH--HHhhh
Confidence 6999999999999999999999988877531 1 0223333 37788765443 12 23469
Q ss_pred CCCCCCcCCCcc
Q psy11075 182 LNRNFPDQFEYE 193 (195)
Q Consensus 182 lNRnf~~~w~~~ 193 (195)
|||-|+..|+.-
T Consensus 102 lNR~F~gr~q~~ 113 (324)
T COG2988 102 LNRMFGGRPQSF 113 (324)
T ss_pred HHHHhCCCcccC
Confidence 999998877753
No 71
>PF02244 Propep_M14: Carboxypeptidase activation peptide; InterPro: IPR003146 Peptide proteinase inhibitors can be found as single domain proteins or as single or multiple domains within proteins; these are referred to as either simple or compound inhibitors, respectively. In many cases they are synthesised as part of a larger precursor protein, either as a prepropeptide or as an N-terminal domain associated with an inactive peptidase or zymogen. This domain prevents access of the substrate to the active site. Removal of the N-terminal inhibitor domain either by interaction with a second peptidase or by autocatalytic cleavage activates the zymogen. Other inhibitors interact direct with proteinases using a simple noncovalent lock and key mechanism; while yet others use a conformational change-based trapping mechanism that depends on their structural and thermodynamic properties. The peptidases are synthesised as inactive molecules, zymogens, with propeptides that must be removed by proteolytic cleavage to activate the enzyme. Structural studies of carboxypeptidases A and B reveal the propeptide to exist as a globular domain, followed by an extended alpha-helix; this shields the catalytic site, without specifically binding to it, while the substrate-binding site is blocked by making specific contacts [, ]. Members of this propeptide family are found in the metallocarboxypeptidases: A1, A2 [], A3, A4, A5, A6, U, insect gut carboxypeptidase and B [], and and are associated with peptidases belonging to MEROPS peptidase family M14A. Carboxypeptidases are found in abundance in pancreatic secretions. The pro-segment moiety (activation peptide) accounts for up to a quarter of the total length of the peptidase.; GO: 0004180 carboxypeptidase activity, 0006508 proteolysis; PDB: 3D68_C 3D67_B 3D66_A 1PBA_A 3GLJ_A 1NSA_A 1KWM_A 2BOA_B 1PYT_A 1JQG_A ....
Probab=93.03 E-value=0.084 Score=34.71 Aligned_cols=36 Identities=19% Similarity=0.310 Sum_probs=29.2
Q ss_pred eeeccchhh-hhhhhccCCCceeEEecCChhhHHHhc
Q psy11075 2 TLIVPSLSL-LLCHVTLSTAADYYFDFDDLTGLEDAD 37 (195)
Q Consensus 2 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 (195)
-||||+-.+ -+...+...++.|.+.++|++++++++
T Consensus 37 dv~V~p~~~~~f~~~L~~~~i~~~v~i~dvq~~Id~E 73 (74)
T PF02244_consen 37 DVMVPPEKLEEFEELLKEHGIEYEVLIEDVQKLIDEE 73 (74)
T ss_dssp EEEEEGGGHHHHHHHHHHTT-EEEEEES-HHHHHHHH
T ss_pred EEEECHHHHHHHHHHHHHCCCcEEEEeHHHHHHHHhc
Confidence 489999877 567777799999999999999999876
No 72
>PF09892 DUF2119: Uncharacterized protein conserved in archaea (DUF2119); InterPro: IPR019218 This entry represents a family of hypothetical archaeal proteins of unknown function.
Probab=92.67 E-value=0.18 Score=39.52 Aligned_cols=45 Identities=22% Similarity=0.391 Sum_probs=30.9
Q ss_pred ceEEEeecccCCCchhHHHHHHHHHHHHHhcCCChHHHHhhccceEEEEeccCcccch
Q psy11075 101 PMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFA 158 (195)
Q Consensus 101 ~~v~i~~g~Hg~E~~g~~~~l~~~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~ 158 (195)
|+=+++||+||+|+--+.-++ +.|..+ .+.+-.+.|+|+++ +|-.
T Consensus 7 p~rLFvgGlHG~Egk~t~~iL---~~l~~~---------~~~~G~l~i~plv~-~~kY 51 (193)
T PF09892_consen 7 PKRLFVGGLHGDEGKDTSPIL---KRLKPN---------DFNNGNLIIIPLVE-NSKY 51 (193)
T ss_pred ceEEEEeeccCcchhhHHHHH---HHhCcc---------cccCceEEEEeCCC-CCCc
Confidence 889999999999997766555 444321 23347899999444 4543
No 73
>COG4073 Uncharacterized protein conserved in archaea [Function unknown]
Probab=91.37 E-value=0.14 Score=39.33 Aligned_cols=41 Identities=17% Similarity=0.388 Sum_probs=30.4
Q ss_pred EEeecccCCCchhHHHHHHHHHHHHHhcCCChHHHHhhccceEEEEeccCcccc
Q psy11075 104 KYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGF 157 (195)
Q Consensus 104 ~i~~g~Hg~E~~g~~~~l~~~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~ 157 (195)
+++||+||+|+-.++-++. ++.+-. .|-++.|+|.+|+--|
T Consensus 18 lfV~GlHGdEgk~te~ilr-l~~~~~------------~ng~l~Vip~v~n~~Y 58 (198)
T COG4073 18 LFVGGLHGDEGKATEPILR-LRVLPE------------ENGVLRVIPKVENGPY 58 (198)
T ss_pred EEEeeccCcccchhhhhhh-hcccCc------------cCceEEEEeccCCCCc
Confidence 8999999999999988886 333321 4578899997665544
No 74
>KOG3641|consensus
Probab=72.59 E-value=1.9 Score=39.43 Aligned_cols=41 Identities=32% Similarity=0.490 Sum_probs=26.3
Q ss_pred CChHHHHhhccceEEEEeccCcccchhhhccCCCCCCCCCCCCCCccccCCCCCCc
Q psy11075 133 KDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAHGVDLNRNFPD 188 (195)
Q Consensus 133 ~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~ 188 (195)
+|+....|++-+.+ ||++||||+... ..|.++|..||.+.+
T Consensus 152 dde~~~~l~~~~v~--Vp~l~P~~~~~~-------------~~~trsV~e~~~~~~ 192 (650)
T KOG3641|consen 152 DDERNQTLRRLFVF--VPMLNPDGVVRG-------------HYNTRSVNENRQYLK 192 (650)
T ss_pred cchhhhhHhhheee--eeccCCcEEEEE-------------eeeccccccccceec
Confidence 34444555543333 999999999875 233378888877644
No 75
>PF07454 SpoIIP: Stage II sporulation protein P (SpoIIP); InterPro: IPR010897 This family contains the bacterial stage II sporulation protein P (SpoIIP) (approximately 350 residues long). It has been shown that a block in polar cytokinesis in Bacillus subtilis is mediated partly by transcription of spoIID, spoIIM and spoIIP. This inhibition of polar division is involved in the locking in of asymmetry after the formation of a polar septum during sporulation []. SpoIIP is one of the three genes (spoIID, spoIIM and spoIIP, [, , ]), under the control of sigma E, that have been shown to be essential for the engulfment of the forespore by the mother cell. Their products are involved in degradation of the septal peptidoglycan and mutations in spoIID, spoIIM or spoIIP block sporulation at morphological stage II, prior to the stage of engulfment. These three genes are absolutely conserved (sometimes even duplicated) in all endospore formers [].
Probab=34.12 E-value=2.6e+02 Score=23.25 Aligned_cols=76 Identities=13% Similarity=0.024 Sum_probs=50.3
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCcEEEEEccccCCC-ceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHH
Q psy11075 44 QRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQG-RNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVF 122 (195)
Q Consensus 44 ~~y~t~~ei~~~l~~l~~~~p~~v~~~~iG~S~~G-r~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~ 122 (195)
..-.+|..-...++++-+++|++--+..+-+.-.. +.....+|... .-....|++|+-|++=..-...+..
T Consensus 138 ~y~~sY~~Sr~tv~~~l~~~p~i~~~iDiHRDs~~~~~~~t~~InG~--------~~Aki~fVvG~~np~~~~N~~fA~~ 209 (268)
T PF07454_consen 138 SYNQSYKRSRETVKKALKENPDIKVVIDIHRDSVPDREKTTTTINGK--------NYAKIMFVVGRDNPNWEKNLAFAKQ 209 (268)
T ss_pred hhHHHHHHHHHHHHHHHHHCCCceEEEEecCCCCCccccceEEECCE--------EeeEEEEEEcCCCCCHHHHHHHHHH
Confidence 44467888899999999999997666777665444 77777777662 2235678888887764333333333
Q ss_pred HHHHH
Q psy11075 123 LIQYL 127 (195)
Q Consensus 123 ~~~~L 127 (195)
+...+
T Consensus 210 l~~~~ 214 (268)
T PF07454_consen 210 LHAKL 214 (268)
T ss_pred HHHHH
Confidence 33333
No 76
>PF05127 Helicase_RecD: Helicase; InterPro: IPR007807 This domain is about 350 amino acid residues long and appears to have a P-loop motif, suggesting this is an ATPase. This domain is often N-terminal to a GCN5-related N-acetyltransferase domain IPR000182 from INTERPRO and C-terminal to IPR013562 from INTERPRO.; PDB: 2ZPA_B.
Probab=33.45 E-value=44 Score=26.02 Aligned_cols=31 Identities=19% Similarity=0.308 Sum_probs=24.5
Q ss_pred CcceEEEeecccCCCchhHHHHHHHHHHHHH
Q psy11075 99 MKPMFKYVANMHGDETVGYALMVFLIQYLVL 129 (195)
Q Consensus 99 ~k~~v~i~~g~Hg~E~~g~~~~l~~~~~L~~ 129 (195)
..+.|++.+.+||-|-+|--..+.|++.|-.
T Consensus 113 ~~~~vv~stTi~GYEGtGRgF~lkf~~~L~~ 143 (177)
T PF05127_consen 113 RFPRVVFSTTIHGYEGTGRGFSLKFLKQLKK 143 (177)
T ss_dssp CSSEEEEEEEBSSTTBB-HHHHHHHHCT---
T ss_pred hCCEEEEEeeccccccCCceeeeehhhhccc
Confidence 4578999999999999999999999988853
No 77
>PF12444 Sox_N: Sox developmental protein N terminal ; InterPro: IPR022151 This domain family is found in eukaryotes, and is typically between 69 and 88 amino acids in length. The family is found in association with PF00505 from PFAM. There are two conserved sequence motifs: YDW and PVR. This family contains Sox8, Sox9 and Sox10 proteins which have structural similarity. Sox proteins are involved in developmental processes.
Probab=30.15 E-value=37 Score=23.17 Aligned_cols=17 Identities=29% Similarity=0.563 Sum_probs=15.0
Q ss_pred hHHHHhhccceEEEEec
Q psy11075 135 DRITKLLNSTDIYIVPS 151 (195)
Q Consensus 135 ~~~~~ll~~~~l~iiP~ 151 (195)
.++.++|+.++|.+|||
T Consensus 64 dAVsqVLkGYDWtLVPm 80 (84)
T PF12444_consen 64 DAVSQVLKGYDWTLVPM 80 (84)
T ss_pred HHHHHHhccCCceeeec
Confidence 46788999999999998
No 78
>TIGR02867 spore_II_P stage II sporulation protein P. Stage II sporulation protein P is a protein of the endospore formation program in a number of lineages in the Firmicutes (low-GC Gram-positive bacteria). It is expressed in the mother cell compartment, under control of Sigma-E. SpoIIP, along with SpoIIM and SpoIID, is one of three major proteins involved in engulfment of the forespore by the mother cell. This protein family is named for the single member in Bacillus subtilis, although most sporulating bacteria have two members.
Probab=24.92 E-value=3.5e+02 Score=21.38 Aligned_cols=71 Identities=11% Similarity=0.011 Sum_probs=43.7
Q ss_pred CCCHHHHHHHHHHHHHHCCCcEEEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHHHHH
Q psy11075 46 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFLIQ 125 (195)
Q Consensus 46 y~t~~ei~~~l~~l~~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~~~ 125 (195)
-.+|..-.+.++++-+++|++-=+..+-+.-..+.....+|... .-.+..|++|.-|++- +.-+.|+.
T Consensus 63 ~~sY~~Sr~tv~~~l~~~p~i~~viDiHRDs~~~~~~t~~inG~--------~~Aki~fVvG~~np~~----~~N~~fA~ 130 (196)
T TIGR02867 63 EQSYDRSRETVKKALKENKDLKYIIDLHRDSVRRKKTTVNINGE--------SVAKVMFVIGKNNPHF----EKNLQLAN 130 (196)
T ss_pred HHHHHHHHHHHHHHHHHCCCceEEEEeecCCCCCCcceEEECCE--------EEEEEEEEEcCCCCCH----HHHHHHHH
Confidence 35678888888888889998766677766544455555555541 1223467777666544 34444554
Q ss_pred HHH
Q psy11075 126 YLV 128 (195)
Q Consensus 126 ~L~ 128 (195)
.|-
T Consensus 131 ~l~ 133 (196)
T TIGR02867 131 KLH 133 (196)
T ss_pred HHH
Confidence 443
No 79
>COG4271 Predicted nucleotide-binding protein containing TIR -like domain [Transcription]
Probab=22.59 E-value=2.8e+02 Score=22.28 Aligned_cols=61 Identities=18% Similarity=0.214 Sum_probs=32.3
Q ss_pred CCCcceEEEeecccCCCchhHHHHHHHHHHHHHh--c-C----CC----hHHHHhhccceEEEEeccCcc--cchhhh
Q psy11075 97 TLMKPMFKYVANMHGDETVGYALMVFLIQYLVLK--D-G----KD----DRITKLLNSTDIYIVPSINPD--GFAAAK 161 (195)
Q Consensus 97 ~~~k~~v~i~~g~Hg~E~~g~~~~l~~~~~L~~~--~-~----~d----~~~~~ll~~~~l~iiP~~NPD--G~~~~~ 161 (195)
.+.++.||++.|+.+ ++......|+++.... + + .. +.+.+-++++.|-|+ +.-|| ||....
T Consensus 79 ~p~~kkvFvv~ghd~---iArael~allrd~~l~~vi~d~~~~~g~~ile~lek~i~~v~FAi~-latPDDkgy~~~~ 152 (233)
T COG4271 79 MPNLKKVFVVSGHDA---IARAELEALLRDWKLEPVILDGLFSEGQTILESLEKYIAEVKFAIV-LATPDDKGYRAVH 152 (233)
T ss_pred cCCceeEEEEeccHH---HHHHHHHHHhhccccceEEecCcccccHHHHHHHHHHhhhceEEEE-EecCccccccccc
Confidence 345558999777766 4433333444322111 0 0 11 244555667777766 67787 665444
No 80
>PF13174 TPR_6: Tetratricopeptide repeat; PDB: 3QKY_A 2XEV_A 3URZ_B 2Q7F_A.
Probab=22.46 E-value=1.2e+02 Score=15.20 Aligned_cols=18 Identities=22% Similarity=0.495 Sum_probs=14.9
Q ss_pred CHHHHHHHHHHHHHHCCC
Q psy11075 48 NSTELDAFILKTVKSYPH 65 (195)
Q Consensus 48 t~~ei~~~l~~l~~~~p~ 65 (195)
.+++-...++++.+.||+
T Consensus 15 ~~~~A~~~~~~~~~~~P~ 32 (33)
T PF13174_consen 15 DYDEAIEYFQRLIKRYPD 32 (33)
T ss_dssp HHHHHHHHHHHHHHHSTT
T ss_pred CHHHHHHHHHHHHHHCcC
Confidence 467788889999999986
No 81
>PF06067 DUF932: Domain of unknown function (DUF932); InterPro: IPR017686 Members of this uncharacterised protein are found in various Mycobacterium phage genomes, in Streptomyces coelicolor Plasmid SCP1 and in bacterial genomes near various markers that suggest lateral gene transfer. The function of this protein is unknown.
Probab=20.77 E-value=4.4e+02 Score=21.06 Aligned_cols=36 Identities=19% Similarity=0.149 Sum_probs=28.5
Q ss_pred CCCHHHHHHHHHHHHHHCCCcEEEEEccccCCCceeeE
Q psy11075 46 YYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWA 83 (195)
Q Consensus 46 y~t~~ei~~~l~~l~~~~p~~v~~~~iG~S~~Gr~i~~ 83 (195)
+..+.|+.+.++.|..+. + +...+.|....||..++
T Consensus 11 ~iqn~e~~~~~~~L~~~g-~-~~~et~g~lr~Grr~~~ 46 (239)
T PF06067_consen 11 PIQNEEVFEFVDDLREEG-G-PVYETAGSLRGGRRVFV 46 (239)
T ss_pred EECHHHHHHHHHHHHhcC-C-CeEEEeccccCCceEEE
Confidence 566788889999999875 4 68888888877887666
No 82
>PF04327 DUF464: Protein of unknown function (DUF464); InterPro: IPR007422 This entry is represented by Bacteriophage Cp-1, Orf13. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches.; PDB: 2IDL_A 2G0J_D 2G0I_B 2P92_B 1S12_C.
Probab=20.50 E-value=1.6e+02 Score=20.43 Aligned_cols=21 Identities=14% Similarity=0.189 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHHCCCcEEE
Q psy11075 49 STELDAFILKTVKSYPHLVRA 69 (195)
Q Consensus 49 ~~ei~~~l~~l~~~~p~~v~~ 69 (195)
.+.+...|+.++++||+.+++
T Consensus 83 l~~~~~gL~~i~~~Yp~~Iki 103 (103)
T PF04327_consen 83 LETLLLGLKSIEEQYPDYIKI 103 (103)
T ss_dssp HHHHHHHHHHHHHHTTTTEEE
T ss_pred HHHHHHHHHHHHHHhhhhccC
Confidence 456777888999999998874
No 83
>cd05313 NAD_bind_2_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 2. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia asimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids t
Probab=20.16 E-value=2.1e+02 Score=23.62 Aligned_cols=27 Identities=4% Similarity=-0.040 Sum_probs=22.4
Q ss_pred eecccCCCchhHHHHHHHHHHHHHhcC
Q psy11075 106 VANMHGDETVGYALMVFLIQYLVLKDG 132 (195)
Q Consensus 106 ~~g~Hg~E~~g~~~~l~~~~~L~~~~~ 132 (195)
.||.+||+..+..-+.+.++..+...+
T Consensus 7 ~GGs~gR~~aTg~Gv~~~~~~~~~~~~ 33 (254)
T cd05313 7 WGGSLIRPEATGYGLVYFVEEMLKDRN 33 (254)
T ss_pred CCCCCCCCchhHHHHHHHHHHHHHhcC
Confidence 399999998888888888888877653
Done!