Query psy11075
Match_columns 195
No_of_seqs 112 out of 1242
Neff 8.1
Searched_HMMs 29240
Date Fri Aug 16 17:24:26 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11075.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11075hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dgv_A TAFI, carboxypeptidase 100.0 2.4E-42 8.2E-47 298.6 18.8 185 2-192 47-244 (401)
2 1kwm_A Procarboxypeptidase B; 100.0 3.4E-40 1.2E-44 285.9 19.6 184 2-192 53-245 (402)
3 1aye_A PCPA2, procarboxypeptid 100.0 3.4E-40 1.2E-44 285.7 19.6 183 2-192 48-245 (401)
4 2boa_A Carboxypeptidase A4; me 100.0 1.3E-39 4.4E-44 282.4 19.2 185 2-192 48-248 (404)
5 3mn8_A LP15968P; catalytic dom 100.0 8.9E-40 3.1E-44 285.6 15.1 155 35-192 29-183 (435)
6 1jqg_A Carboxypeptidase A; Pro 100.0 3.9E-39 1.3E-43 281.5 18.1 183 2-192 62-263 (433)
7 1pca_A Procarboxypeptidase A P 100.0 1E-40 3.6E-45 289.0 2.7 183 2-191 49-247 (403)
8 3v38_A Carboxypeptidase T; hyd 100.0 5.9E-38 2E-42 264.9 16.6 145 44-192 7-155 (326)
9 1dtd_A Carboxypeptidase A2; ca 100.0 1.6E-37 5.3E-42 260.1 16.4 144 41-192 1-147 (303)
10 1m4l_A Carboxypeptidase A; met 100.0 1.8E-37 6.3E-42 260.1 16.6 146 40-192 6-153 (307)
11 1z5r_A Procarboxypeptidase B; 100.0 2.1E-37 7.2E-42 259.6 16.7 146 40-192 3-150 (306)
12 2bo9_A Carboxypeptidase A4; me 100.0 8E-37 2.8E-41 256.3 17.1 147 40-192 4-152 (308)
13 3prt_A Carboxypeptidase T; hyd 100.0 1.3E-36 4.5E-41 256.5 16.9 147 42-192 5-155 (323)
14 1h8l_A Carboxypeptidase GP180 100.0 6.7E-37 2.3E-41 263.5 14.9 142 44-191 8-149 (380)
15 3d4u_A Tafia, carboxypeptidase 100.0 2E-36 6.9E-41 253.9 14.3 147 40-192 3-152 (309)
16 1uwy_A Carboxypeptidase M; met 100.0 1.1E-35 3.6E-40 259.4 16.7 142 44-191 3-144 (426)
17 2c1c_A Carboxypeptidase B; ins 100.0 9.7E-36 3.3E-40 250.1 15.6 144 41-192 1-149 (312)
18 2nsm_A Carboxypeptidase N cata 100.0 7.6E-35 2.6E-39 254.9 13.2 140 43-188 3-146 (439)
19 3k2k_A Putative carboxypeptida 100.0 2.9E-31 9.9E-36 229.5 10.1 134 38-188 124-259 (403)
20 3l2n_A Peptidase M14, carboxyp 100.0 2.8E-30 9.5E-35 222.8 9.8 129 38-188 122-250 (395)
21 4a37_A Metallo-carboxypeptidas 100.0 6.6E-30 2.3E-34 220.3 10.0 129 38-188 117-245 (388)
22 2qvp_A Uncharacterized protein 100.0 2.5E-30 8.6E-35 213.6 5.4 119 44-191 16-135 (275)
23 3b2y_A Metallopeptidase contai 99.9 3.4E-24 1.2E-28 176.9 9.9 117 44-191 20-136 (275)
24 4axv_A MPAA; hydrolase; HET: M 99.9 1.9E-24 6.6E-29 175.3 4.3 95 62-189 16-110 (243)
25 3fmc_A Putative succinylglutam 99.6 2.2E-15 7.7E-20 128.8 8.6 101 67-191 6-109 (368)
26 2qj8_A MLR6093 protein; struct 99.6 8.4E-15 2.9E-19 123.6 9.8 88 72-190 24-114 (332)
27 3cdx_A Succinylglutamatedesucc 99.5 1.1E-14 3.9E-19 123.9 8.0 81 79-190 41-122 (354)
28 3na6_A Succinylglutamate desuc 99.4 2.4E-13 8.1E-18 114.7 7.3 82 79-191 37-119 (331)
29 1yw6_A Succinylglutamate desuc 99.4 3.7E-13 1.3E-17 113.7 7.4 110 50-191 4-116 (335)
30 2bco_A Succinylglutamate desuc 99.4 1E-13 3.6E-18 117.8 3.4 112 51-192 6-122 (350)
31 1yw4_A Succinylglutamate desuc 99.1 4.5E-11 1.6E-15 101.1 5.6 69 100-191 46-114 (341)
32 2gu2_A ASPA protein; aspartoac 99.0 9.7E-11 3.3E-15 98.0 3.7 66 99-189 9-75 (312)
33 3nh4_A Aspartoacylase-2; merca 98.8 2.8E-09 9.7E-14 89.5 4.1 68 99-191 19-87 (327)
34 1vjq_A Designed protein; struc 84.9 0.22 7.4E-06 32.3 0.4 36 2-37 42-78 (79)
35 1bde_A VPR protein; AIDS, HIV, 58.7 4.5 0.00015 22.0 1.4 20 110-129 2-21 (35)
36 2gjf_A Designed protein; proca 37.2 9.6 0.00033 24.1 0.7 27 3-29 51-78 (78)
37 3a4c_A DNA replication factor 30.5 1E+02 0.0034 21.0 4.9 31 43-73 47-77 (106)
38 1s12_A Hypothetical protein TM 23.2 1.1E+02 0.0036 20.1 4.0 23 49-71 67-89 (94)
39 2idl_A Hypothetical protein; c 21.4 1.1E+02 0.0039 20.8 4.0 24 49-72 91-114 (117)
40 2g0i_A Hypothetical protein SM 21.4 1.1E+02 0.0038 21.9 4.1 24 49-72 120-143 (145)
No 1
>3dgv_A TAFI, carboxypeptidase B2; blood coagulation, fibrinolysis, protein S glycoprotein, hydrolase, metal-binding, metalloprotease, PR secreted, zymogen; HET: NAG NDG FUL BMA; 2.50A {Bos taurus} PDB: 3osl_A 3d68_A* 3d66_A* 3d67_A*
Probab=100.00 E-value=2.4e-42 Score=298.63 Aligned_cols=185 Identities=19% Similarity=0.288 Sum_probs=164.9
Q ss_pred eeeccchhh-hhhhhccCCCceeEEecCChhhHHHhccC---------CCCCCCCCCHHHHHHHHHHHHHHCCCcEEEEE
Q psy11075 2 TLIVPSLSL-LLCHVTLSTAADYYFDFDDLTGLEDADSA---------GIDLQRYYNSTELDAFILKTVKSYPHLVRAET 71 (195)
Q Consensus 2 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~y~t~~ei~~~l~~l~~~~p~~v~~~~ 71 (195)
-|+||+-.+ -+...+...+++|+++++|++++++++.. .++|..|++|+||.++|++|+++||+++++.+
T Consensus 47 dv~v~~~~~~~~~~~l~~~~~~~~v~i~d~~~~i~~~~~~~~~~~~~~~~~~~~Y~t~~ei~~~l~~L~~~~p~~v~~~~ 126 (401)
T 3dgv_A 47 HFFVNASDVSNVKAHLNASRIPFRVLVENVEDLIRQQTSNDTISPRASSSYYEQYHSLNEIYSWIEVMTERYPDMVEKIH 126 (401)
T ss_dssp EEEEEGGGHHHHHHHHHHTTCCEEEEESCHHHHHHHHTTTSSSSCTTCTTGGGSCCCHHHHHHHHHHHHHHCTTTEEEEE
T ss_pred EEEECHHHHHHHHHHHHHcCCeEEEEhHHHHHHHHHhhhhhcccccccCCCccccCCHHHHHHHHHHHHHHCCCcEEEEE
Confidence 478888766 44555567899999999999999997753 36789999999999999999999999999999
Q ss_pred ccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHHHHHHHHHhcCCChHHHHhhccceEEEEec
Q psy11075 72 IGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPS 151 (195)
Q Consensus 72 iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~~~~L~~~~~~d~~~~~ll~~~~l~iiP~ 151 (195)
+|+|++||+|++++|++. + ...||.|++.||+||+||+|+++++++++.|+.+|+.|+.++.+|++++|+|+|+
T Consensus 127 iG~S~eGR~i~~l~is~~---~---~~~kp~v~i~~giHg~E~ig~~~~l~~~~~L~~~y~~d~~~~~ll~~~~i~ivP~ 200 (401)
T 3dgv_A 127 IGSSYEKYPLYVLKVSKK---E---QRAKNAMWIDCGIHAREWISPAFCLWFVGSVTYYYGKEKMHTNLLKHMDFYIMPV 200 (401)
T ss_dssp EEECTTCCEEEEEEECCC---C---SSCCEEEEEEECSSTTCTHHHHHHHHHHHHHHHHTTTSHHHHHHHHHEEEEEESC
T ss_pred cccCCCCCEEEEEEecCC---C---CCCCcEEEEeCCCCCCCCccHHHHHHHHHhhhhhccCCHHHHHHHhCCeEEEEEe
Confidence 999999999999999984 1 2358999999999999999999999999999999989999999999999999999
Q ss_pred cCcccchhhhccCCCCC--CCCCCCCCCccccCCCCCCc-CCCc
Q psy11075 152 INPDGFAAAKEGKCDSL--DGYVGRKNAHGVDLNRNFPD-QFEY 192 (195)
Q Consensus 152 ~NPDG~~~~~~~~~~~~--~~~~~r~n~~GvDlNRnf~~-~w~~ 192 (195)
+||||+++++++++.|+ ++...+.||+||||||||++ +|+.
T Consensus 201 ~NPDG~~~~~~~~r~wrknR~~~~~~n~~GvDLNRNf~~~~w~~ 244 (401)
T 3dgv_A 201 VNVDGYDYTWKKDRMWRKNRSLHEKNACVGTDLNRNFASKHWCG 244 (401)
T ss_dssp SCHHHHHHHHHTCTTCCSCCCCCTTCSSCCCCGGGCSCCTTTTS
T ss_pred eccchhhheeccCcceeecccCCCCCCCCCCChhhcCCcccccc
Confidence 99999999999988765 33445679999999999999 9964
No 2
>1kwm_A Procarboxypeptidase B; hydrolase; HET: CIT; 1.60A {Homo sapiens} SCOP: c.56.5.1 d.58.3.1 PDB: 3glj_A 1nsa_A 1pba_A
Probab=100.00 E-value=3.4e-40 Score=285.86 Aligned_cols=184 Identities=20% Similarity=0.309 Sum_probs=162.1
Q ss_pred eeeccchhh-hhhhhccCCCceeEEecCChhhHHHhccC------CCCCCCCCCHHHHHHHHHHHHHHCCCcEEEEEccc
Q psy11075 2 TLIVPSLSL-LLCHVTLSTAADYYFDFDDLTGLEDADSA------GIDLQRYYNSTELDAFILKTVKSYPHLVRAETIGK 74 (195)
Q Consensus 2 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~y~t~~ei~~~l~~l~~~~p~~v~~~~iG~ 74 (195)
.|+||+-.+ -+...+...+++|++.++|+++.++++.. .++|..|++|+|+.++|++|+++||+++++.++|+
T Consensus 53 ~v~v~~~~~~~~~~~l~~~~~~~~~~i~d~~~~i~~~~~~~~~~~~~~~~~y~t~~ei~~~l~~l~~~~p~~v~~~~iG~ 132 (402)
T 1kwm_A 53 DFRVKAEDTVTVENVLKQNELQYKVLISNLRNVVEAQFDSRVRATGHSYEKYNKWETIEAWTQQVATENPALISRSVIGT 132 (402)
T ss_dssp EEEECGGGHHHHHHHHHHTTCCEEEEESCHHHHHHHTCCCCCCSSSCCTTSCCCHHHHHHHHHHHHHHCTTTEEEEEEEE
T ss_pred EEEECHHHHHHHHHHHHHcCCeEEEEhhhHHHHHHHhcccccccCCCCcCCCCCHHHHHHHHHHHHHHCCCcEEEEEccc
Confidence 478888765 33444456799999999999999998743 36789999999999999999999999999999999
Q ss_pred cCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHHHHHHHHHhcCCChHHHHhhccceEEEEeccCc
Q psy11075 75 SVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINP 154 (195)
Q Consensus 75 S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NP 154 (195)
|++||+|++++|+++ ..+||.|+|+||+||+||+|+++++++++.|+.+|..|+.++.+|++++|+|||++||
T Consensus 133 S~eGR~i~~l~i~~~-------~~~kp~v~i~agiHg~E~~g~~~~~~li~~L~~~y~~d~~~~~ll~~~~~~ivP~~NP 205 (402)
T 1kwm_A 133 TFEGRAIYLLKVGKA-------GQNKPAIFMDCGFHAREWISPAFCQWFVREAVRTYGREIQVTELLNKLDFYVLPVLNI 205 (402)
T ss_dssp CTTSCEEEEEEESCC-------CTTCCEEEEECCSSTTCTHHHHHHHHHHHHHHHHTTTSHHHHHHHHHCEEEEESCSCH
T ss_pred CCCCCceEEEEeCCC-------CCCCceEEEecCCCCCccchHHHHHHHHHHHHHHhcCCHHHHHHHhCCeEEEEeeeCC
Confidence 999999999999973 1468999999999999999999999999999999988999999999999999999999
Q ss_pred ccchhhhccCCCCCCC--CCCCCCCccccCCCCCCcCCCc
Q psy11075 155 DGFAAAKEGKCDSLDG--YVGRKNAHGVDLNRNFPDQFEY 192 (195)
Q Consensus 155 DG~~~~~~~~~~~~~~--~~~r~n~~GvDlNRnf~~~w~~ 192 (195)
||+++.+++++.|+.. ...+.||.|+||||||+++|..
T Consensus 206 DG~~~~~~~~r~wrk~R~~~~~~~~~GvDLNRnf~~~w~~ 245 (402)
T 1kwm_A 206 DGYIYTWTKSRFWRKTRSTHTGSSCIGTDPNRNFDAGWCE 245 (402)
T ss_dssp HHHHHHHHTCTTCCSCCCCCSSCCCCCCCGGGCSSSSTTS
T ss_pred cchhhcccccceeeccCCCCCCCCCcCcccccCCccccCC
Confidence 9999999888876542 2234689999999999999974
No 3
>1aye_A PCPA2, procarboxypeptidase A2; serine protease, zymogen, hydrolase; 1.80A {Homo sapiens} SCOP: c.56.5.1 d.58.3.1 PDB: 1o6x_A
Probab=100.00 E-value=3.4e-40 Score=285.69 Aligned_cols=183 Identities=25% Similarity=0.330 Sum_probs=162.3
Q ss_pred eeeccchhh-hhhhhccCCCceeEEecCChhhHHHhcc------------CCCCCCCCCCHHHHHHHHHHHHHHCCCcEE
Q psy11075 2 TLIVPSLSL-LLCHVTLSTAADYYFDFDDLTGLEDADS------------AGIDLQRYYNSTELDAFILKTVKSYPHLVR 68 (195)
Q Consensus 2 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~y~t~~ei~~~l~~l~~~~p~~v~ 68 (195)
-|+||+-.+ -+...+...+++|++.++|+++.++++. ..++|..|++|+|+.++|++|+++||++++
T Consensus 48 ~v~v~~~~~~~~~~~l~~~~~~~~~~i~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~y~t~~ei~~~l~~l~~~~p~~v~ 127 (401)
T 1aye_A 48 HVRVPFVNVQAVKVFLESQGIAYSIMIEDVQVLLDKENEEMLFNRRRERSGNFNFGAYHTLEEISQEMDNLVAEHPGLVS 127 (401)
T ss_dssp EEEECGGGHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHHHHHHHHHTTTSCCCSSSCCCHHHHHHHHHHHHHHCTTTEE
T ss_pred EEEECHHHHHHHHHHHHHcCCeEEEEehhHHHHHHHhcchhcccccccccccCCCCCCCCHHHHHHHHHHHHHHCCCcEE
Confidence 367888766 3344455789999999999999988652 347899999999999999999999999999
Q ss_pred EEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHHHHHHHHHhcCCChHHHHhhccceEEE
Q psy11075 69 AETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYI 148 (195)
Q Consensus 69 ~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~~~~L~~~~~~d~~~~~ll~~~~l~i 148 (195)
+.++|+|++||+|++++|+++ .+||+|+|+||+||+||+|+++++++++.|+.+|+.|+.++.+|++++|+|
T Consensus 128 ~~~iG~S~eGR~i~~l~i~~~--------~~kp~v~i~agiHg~E~~g~~~~~~l~~~L~~~y~~d~~~~~ll~~~~~~i 199 (401)
T 1aye_A 128 KVNIGSSFENRPMNVLKFSTG--------GDKPAIWLDAGIHAREWVTQATALWTANKIVSDYGKDPSITSILDALDIFL 199 (401)
T ss_dssp EEEEEECTTSCEEEEEEECSS--------SSCCEEEEEECSSTTCHHHHHHHHHHHHHHHHHTTTSHHHHHHHHHCEEEE
T ss_pred EEEcccCCCCCeeEEEEecCC--------CCCceEEEecccCCCccccHHHHHHHHHHHHHHhCCCHHHHHHHhcCeEEE
Confidence 999999999999999999973 168999999999999999999999999999999988999999999999999
Q ss_pred EeccCcccchhhhccCCCCCC--CCCCCCCCccccCCCCCCcCCCc
Q psy11075 149 VPSINPDGFAAAKEGKCDSLD--GYVGRKNAHGVDLNRNFPDQFEY 192 (195)
Q Consensus 149 iP~~NPDG~~~~~~~~~~~~~--~~~~r~n~~GvDlNRnf~~~w~~ 192 (195)
||++||||+++.+++++.|+. ....|.||.|+||||||+++|+.
T Consensus 200 vP~~NPDG~~~~~~~~r~wrk~R~~~~~~n~~GvDLNRnfp~~w~~ 245 (401)
T 1aye_A 200 LPVTNPDGYVFSQTKNRMWRKTRSKVSGSLCVGVDPNRNWDAGFGG 245 (401)
T ss_dssp ESCSCHHHHHHHHHTCTTCCSCCCBCTTCSCBCCCGGGCSSSSTTS
T ss_pred EeeEcCCCceecccccceeccCCCCCCCCcccccccccCCcccccc
Confidence 999999999999988887653 33456899999999999999973
No 4
>2boa_A Carboxypeptidase A4; metalloprocarboxypeptidase, X-RAY zymogen, metalloprotease, exopropeptidase, hydrolase; HET: NAG; 2.20A {Homo sapiens} SCOP: c.56.5.1 d.58.3.1
Probab=100.00 E-value=1.3e-39 Score=282.36 Aligned_cols=185 Identities=23% Similarity=0.370 Sum_probs=162.4
Q ss_pred eeeccchhh-hhhhhccCCCceeEEecCChhhHHHhcc-------------CCCCCCCCCCHHHHHHHHHHHHHHCCCcE
Q psy11075 2 TLIVPSLSL-LLCHVTLSTAADYYFDFDDLTGLEDADS-------------AGIDLQRYYNSTELDAFILKTVKSYPHLV 67 (195)
Q Consensus 2 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~y~t~~ei~~~l~~l~~~~p~~v 67 (195)
-|+||+-.+ -+...+...+++|++.++|+++.++++. ..++|..|++|+||.++|++|+++||+++
T Consensus 48 ~~~v~~~~~~~~~~~l~~~~~~~~~~i~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~y~~~~ei~~~l~~l~~~~p~~v 127 (404)
T 2boa_A 48 DVLVPSVSLQAFKSFLRSQGLEYAVTIEDLQALLDNEDDEMQHNEGQERSSNNFNYGAYHSLEAIYHEMDNIAADFPDLA 127 (404)
T ss_dssp EEEECGGGHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHHHHHHHHHHHHHCCCCSSSCCCHHHHHHHHHHHHHHSTTTE
T ss_pred EEEECHHHHHHHHHHHHHcCCeEEEEehhHHHHHHHhhhhhhhhhccccccCCCCCCCCCCHHHHHHHHHHHHHHCCCce
Confidence 378888766 3344555789999999999999888662 45889999999999999999999999999
Q ss_pred EEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHHHHHHHHHhcCCChHHHHhhccceEE
Q psy11075 68 RAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIY 147 (195)
Q Consensus 68 ~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~~~~L~~~~~~d~~~~~ll~~~~l~ 147 (195)
++.++|+|++||+|++++|+++ + ..+||.|+|.||+||+||+|+++++++++.|+.+|+.|+.++.+|++++|+
T Consensus 128 ~~~~iG~S~eGR~i~~l~i~~~---~---~~~kp~v~i~agiHg~E~~g~~~~~~li~~L~~~y~~d~~~~~ll~~~~~~ 201 (404)
T 2boa_A 128 RRVKIGHSFENRPMYVLKFSTG---K---GVRRPAVWLNAGIHSREWISQATAIWTARKIVSDYQRDPAITSILEKMDIF 201 (404)
T ss_dssp EEEEEEECTTCCEEEEEEECSS---T---TSCCCEEEEEECSSTTCHHHHHHHHHHHHHHHHSTTTSHHHHHHHHHCEEE
T ss_pred EEEEeccCCCCCeeEEEEeccC---C---CCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHHhhcCCHHHHHHHhCCeEE
Confidence 9999999999999999999963 1 246899999999999999999999999999999998899999999999999
Q ss_pred EEeccCcccchhhhccCCCCCC--CCCCCCCCccccCCCCCCcCCCc
Q psy11075 148 IVPSINPDGFAAAKEGKCDSLD--GYVGRKNAHGVDLNRNFPDQFEY 192 (195)
Q Consensus 148 iiP~~NPDG~~~~~~~~~~~~~--~~~~r~n~~GvDlNRnf~~~w~~ 192 (195)
|||++||||+++.+++++.|+. ....+.||.|+||||||++.|+.
T Consensus 202 ivP~~NPDG~~~~~~~~r~wrk~R~~~~~~~~~GvDLNRnf~~~w~~ 248 (404)
T 2boa_A 202 LLPVANPDGYVYTQTQNRLWRKTRSRNPGSSCIGADPNRNWNASFAG 248 (404)
T ss_dssp EESCSCHHHHHHHHHTCTTCCSCCCBCTTSSCBCCCGGGCSSSSTTC
T ss_pred EEeeecCcchhhcccccceeecCCCCCCCCCCccccccCCCCccccC
Confidence 9999999999999988887653 22334689999999999999973
No 5
>3mn8_A LP15968P; catalytic domain of alpha/beta-hydrolase fold, C-terminal, A transthyretin-like domain, hydrolase; HET: NAG GEM; 2.70A {Drosophila melanogaster}
Probab=100.00 E-value=8.9e-40 Score=285.64 Aligned_cols=155 Identities=43% Similarity=0.813 Sum_probs=140.9
Q ss_pred HhccCCCCCCCCCCHHHHHHHHHHHHHHCCCcEEEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCc
Q psy11075 35 DADSAGIDLQRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDET 114 (195)
Q Consensus 35 ~~~~~~~~~~~y~t~~ei~~~l~~l~~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~ 114 (195)
.+......|..|++|+||.++|++|+++||+++++.++|+|++||+|++++|++. ++.+...||.|+++||+||+|+
T Consensus 29 ~~~~~~~~~~~Y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~eGR~i~~l~is~~---~~~~~~~kp~v~i~~giHg~E~ 105 (435)
T 3mn8_A 29 KEDESFLQQPHYASQEQLEDLFAGLEKAYPNQAKVHFLGRSLEGRNLLALQISRN---TRSRNLLTPPVKYIANMHGDET 105 (435)
T ss_dssp CCCCGGGSSCCCCCHHHHHHHHHHHHHHSTTTEEEEEEEECTTSCEEEEEEECSC---TTSCCTTCCEEEEECCSSTTCC
T ss_pred CChhhccCCCCCCCHHHHHHHHHHHHHHCCCcEEEEEeeEccCCCEEEEEEEeCC---CCccccCCCEEEEEecCCCCCh
Confidence 3444455788899999999999999999999999999999999999999999984 2333457899999999999999
Q ss_pred hhHHHHHHHHHHHHHhcCCChHHHHhhccceEEEEeccCcccchhhhccCCCCCCCCCCCCCCccccCCCCCCcCCCc
Q psy11075 115 VGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAHGVDLNRNFPDQFEY 192 (195)
Q Consensus 115 ~g~~~~l~~~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w~~ 192 (195)
+|++++++++++|+.+|.+|+.++++|++++|+|+|++||||+++.++++|.|+++..+|.||+||||||||+++|+.
T Consensus 106 ~g~~~~l~l~~~L~~~y~~d~~~~~ll~~~~i~ivP~~NPDG~~~~~~~~r~~~~~~~~R~n~~GvDLNRnf~~~w~~ 183 (435)
T 3mn8_A 106 VGRQLLVYMAQYLLGNHERISDLGQLVNSTDIYLVPTMNPDGYALSQEGNCESLPNYVGRGNAANIDLNRDFPDRLEQ 183 (435)
T ss_dssp HHHHHHHHHHHHHHHHTTTCHHHHHHHHHCEEEEESCSCHHHHHTSCTTCSSCCGGGTTTSCTTCCCGGGCSCCTTC-
T ss_pred hHHHHHHHHHHHHHHhccCCHHHHHhhhCeEEEEEeCcCCChhhhhccCccccCCCCCCCccccCCCcccCCCcccCc
Confidence 999999999999999998899999999999999999999999999999998887777789999999999999999964
No 6
>1jqg_A Carboxypeptidase A; Pro-protein, hydrolase; 2.50A {Helicoverpa armigera} SCOP: c.56.5.1 d.58.3.1
Probab=100.00 E-value=3.9e-39 Score=281.46 Aligned_cols=183 Identities=22% Similarity=0.389 Sum_probs=158.0
Q ss_pred eeeccchhh-hhhhhccCCCceeEEecCChhhHHHhc--------------cCCCCCCCCCCHHHHHHHHHHHHHHCCCc
Q psy11075 2 TLIVPSLSL-LLCHVTLSTAADYYFDFDDLTGLEDAD--------------SAGIDLQRYYNSTELDAFILKTVKSYPHL 66 (195)
Q Consensus 2 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~y~t~~ei~~~l~~l~~~~p~~ 66 (195)
.|+||+-.+ -+...+...+++|++.++|++++++++ ...++|..|++|+|+.++|++|+++||++
T Consensus 62 dv~v~~~~~~~~~~~l~~~~~~~~v~i~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~y~t~~ei~~~l~~l~~~~p~~ 141 (433)
T 1jqg_A 62 KVLVPKFKREIFENFLKQSGVQYKLEVENVKEQLELEDQLLAAAAAKSNSTRSRLSFDKIHSYEEVDAYLQELAKEFPNV 141 (433)
T ss_dssp EEEECGGGHHHHHHHHHHHTCEEEEEESCTHHHHHHHHHHHHHHHHHCCCCSSCCCSSSCCCHHHHHHHHHHHHHHCTTT
T ss_pred EEEECHHHHHHHHHHHHHcCCeEEEEehhHHHHHHhhchhcchhhccccccccccCcCCcCCHHHHHHHHHHHHHHCCCc
Confidence 578888876 444555578999999999999999876 34578999999999999999999999999
Q ss_pred EEEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHHHHHHHHHhcCCChHHHHhhccceE
Q psy11075 67 VRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDI 146 (195)
Q Consensus 67 v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~~~~L~~~~~~d~~~~~ll~~~~l 146 (195)
+++.++|+|++||+|++++|+++ +.+..+||.|+|+||+||+||+|+++++++++.|+.++. + ..+|++++|
T Consensus 142 v~~~~iG~S~eGR~i~~l~i~~~----~~~~~~kp~v~i~agiHg~E~~g~~~~~~li~~L~~~~~-~---~~ll~~~~i 213 (433)
T 1jqg_A 142 VTVVEGGKSFEGRSIKYLRISTT----NFQDASKPVVMMQSLLHCREWVTLPATLYAIHKLVIDVT-E---SDLINNIDW 213 (433)
T ss_dssp EEEEEEEECTTCCEEEEEEECTT----TTCCTTSCEEEEEECSSTTCTTHHHHHHHHHHHHHTSCC-C---THHHHSCEE
T ss_pred EEEEeceECCCCCeEEEEEecCC----CCCCCCCCEEEEecCcCCCchhhHHHHHHHHHHHHhccc-c---HHHHhcceE
Confidence 99999999999999999999973 112356899999999999999999999999999999876 4 478999999
Q ss_pred EEEeccCcccchhhhccCCCCCCCC----CCCCCCccccCCCCCCcCCCc
Q psy11075 147 YIVPSINPDGFAAAKEGKCDSLDGY----VGRKNAHGVDLNRNFPDQFEY 192 (195)
Q Consensus 147 ~iiP~~NPDG~~~~~~~~~~~~~~~----~~r~n~~GvDlNRnf~~~w~~ 192 (195)
+|+|++||||+++.+++++.|+... ..+.+|.|+||||||+++|+.
T Consensus 214 ~ivP~~NPDG~~~~~~~~r~wrk~R~~~~~~~~~~~GvDLNRnf~~~w~~ 263 (433)
T 1jqg_A 214 IILPVANPDGYVHTFGGDRYWRKNRATGYMAGNLCMGVDLNRNFGMNWGT 263 (433)
T ss_dssp EEESCSCHHHHHHHHSSCTTCCSCCCCSSSGGGSSCCCCGGGCSSTTTTS
T ss_pred EEEeeecCccchhcccCccccccCCCCCCCCCCCCcCcccccCCccccCC
Confidence 9999999999999998888765422 123479999999999999974
No 7
>1pca_A Procarboxypeptidase A PCPA; hydrolase(C-terminal peptidase); HET: CIT; 2.00A {Sus scrofa} SCOP: d.58.3.1 PDB: 1pyt_A
Probab=100.00 E-value=1e-40 Score=289.03 Aligned_cols=183 Identities=22% Similarity=0.309 Sum_probs=28.1
Q ss_pred eeeccchhh-hhhhhccCCCceeEEecCChhhHHHhcc-------------CCCCCCCCCCHHHHHHHHHHHHHHCCCcE
Q psy11075 2 TLIVPSLSL-LLCHVTLSTAADYYFDFDDLTGLEDADS-------------AGIDLQRYYNSTELDAFILKTVKSYPHLV 67 (195)
Q Consensus 2 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~y~t~~ei~~~l~~l~~~~p~~v 67 (195)
-|+||+-.+ -+...+...+++|++.++|+++.++++. ..++|..|++|+|+.++|++|+++||+++
T Consensus 49 ~v~v~~~~~~~~~~~l~~~~~~~~~~i~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~y~~~~ei~~~l~~l~~~~p~~v 128 (403)
T 1pca_A 49 DVRVPFPSIQAVKVFLEAHGIRYTIMIEDVQLLLDEEQEQMFASQGRARTTSTFNYATYHTLEEIYDFMDILVAEHPALV 128 (403)
T ss_dssp EEEECGGGHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHHHHHTCCC---------------------------------
T ss_pred EEEeCHHHHHHHHHHHHHcCCeEEEEecchHHHHHHhhhhhcccccccccccccCccCCCCHHHHHHHHHHHHHHCCCcE
Confidence 367888765 3344455889999999999999998653 24679999999999999999999999999
Q ss_pred EEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHHHHHHHHHhcCCChHHHHhhccceEE
Q psy11075 68 RAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIY 147 (195)
Q Consensus 68 ~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~~~~L~~~~~~d~~~~~ll~~~~l~ 147 (195)
++.++|+|++||+|++++|+++ ..+||.|+|+||+||+||+|+++++++++.|+.+|+.|+.++.+|++++|+
T Consensus 129 ~~~~iG~S~eGR~i~~l~i~~~-------~~~kp~v~i~agiHg~E~~g~~~~~~l~~~L~~~y~~d~~~~~ll~~~~~~ 201 (403)
T 1pca_A 129 SKLQIGRSYEGRPIYVLKFSTG-------GSNRPAIWIDSGIHSREWITQASGVWFAKKITENYGQNSSFTAILDSMDIF 201 (403)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEeccCCCCCeEEEEEeCCC-------CCCCCEEEEecCCCCCchhhHHHHHHHHHHHHHhccCCHHHHHHHhCCcEE
Confidence 9999999999999999999973 246899999999999999999999999999999988889999999999999
Q ss_pred EEeccCcccchhhhccCCCCC--CCCCCCCCCccccCCCCCCcCCC
Q psy11075 148 IVPSINPDGFAAAKEGKCDSL--DGYVGRKNAHGVDLNRNFPDQFE 191 (195)
Q Consensus 148 iiP~~NPDG~~~~~~~~~~~~--~~~~~r~n~~GvDlNRnf~~~w~ 191 (195)
|+|++||||+++.+++++.|+ +...+|.||.|+||||||+++|+
T Consensus 202 ivP~~NPDG~~~~~~~~r~wrk~R~~~~~~n~~GvDLNRnfp~~w~ 247 (403)
T 1pca_A 202 LEIVTNPNGFAFTHSDNRLWRKTRSKASGSLCVGSDSNRNWDAGFG 247 (403)
T ss_dssp ----------------------------------------------
T ss_pred EEeeecCCcceecccCccceeccCCCCCCCcccCcccccCCccccc
Confidence 999999999999988887665 33456789999999999999997
No 8
>3v38_A Carboxypeptidase T; hydrolase; HET: GOL; 1.50A {Thermoactinomyces vulgaris} PDB: 1obr_A 3qnv_A 3prt_A
Probab=100.00 E-value=5.9e-38 Score=264.91 Aligned_cols=145 Identities=31% Similarity=0.454 Sum_probs=128.4
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCcEEEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHHH
Q psy11075 44 QRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFL 123 (195)
Q Consensus 44 ~~y~t~~ei~~~l~~l~~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~ 123 (195)
..|++|+||.++|++|+++||+++++.++|+|+|||+|++++|++..+ ....||.|+|.||+||+||+|+++++++
T Consensus 7 ~~Y~ty~ei~~~l~~L~~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~----~~~~kp~v~i~~giHa~E~i~~~~~~~~ 82 (326)
T 3v38_A 7 SGYHNYNEMVNKINTVASNYPNIVKKFSIGKSYEGRELWAVKISDNVG----TDENEPEVLYTALHHAREHLTVEMALYT 82 (326)
T ss_dssp TTSCCHHHHHHHHHHHHHHCTTTEEEEEEEECTTSCEEEEEEECTTTT----SCCCCCEEEEEECSSTTCTHHHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHHHCCCCEEEEEeeEccCCCEEEEEEEecCCC----CCCCCCEEEEEcccCCCChhHHHHHHHH
Confidence 689999999999999999999999999999999999999999997421 1346899999999999999999999999
Q ss_pred HHHHHHhcCCChHHHHhhccceEEEEeccCcccchhhhccC--CCCC--CCCCCCCCCccccCCCCCCcCCCc
Q psy11075 124 IQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGK--CDSL--DGYVGRKNAHGVDLNRNFPDQFEY 192 (195)
Q Consensus 124 ~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~--~~~~--~~~~~r~n~~GvDlNRnf~~~w~~ 192 (195)
++.|+.+|..|+.++.+|++++|+|+|++||||+++.++.+ +.|+ ++.....+|+||||||||+++|+.
T Consensus 83 ~~~L~~~y~~d~~~~~ll~~~~~~ivP~~NPDG~~~~~~~~~~r~WRknR~~~~~~~~~GvDLNRNf~~~w~~ 155 (326)
T 3v38_A 83 LDLFTQNYNLDSRITNLVNNREIYIVFNINPDGGEYDISSGSYKSWRKNRQPNSGSSYVGTDLNRNYGYKWGC 155 (326)
T ss_dssp HHHHHHTTTTSHHHHHHHHHCEEEEECCSCHHHHHHHHTTSSCCCCCSCSCCCTTCSCCCCCGGGCSSTTTTC
T ss_pred HHHHHHHhccCHHHHHHHhCceEEEEeeecCChhhccccCCccccccccCCCCCCCCcCccccccCCCccccc
Confidence 99999999889999999999999999999999999988643 4443 333334569999999999999974
No 9
>1dtd_A Carboxypeptidase A2; carboxypeptidase A2, leech carboxypeptidase inhibitor, hydrolase/hydrolase inhibitor complex; HET: GLU; 1.65A {Homo sapiens} SCOP: c.56.5.1
Probab=100.00 E-value=1.6e-37 Score=260.09 Aligned_cols=144 Identities=26% Similarity=0.342 Sum_probs=131.9
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCcEEEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHH
Q psy11075 41 IDLQRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALM 120 (195)
Q Consensus 41 ~~~~~y~t~~ei~~~l~~l~~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~ 120 (195)
++|..|++|+||.++|++|+++||+++++.++|+|++||+|++++|++. ..||.|+|+||+||+|++|++++
T Consensus 1 ~~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~l~i~~~--------~~~p~v~i~agiHg~E~~g~~~~ 72 (303)
T 1dtd_A 1 FNFGAYHTLEEISQEMDNLVAEHPGLVSKVNIGSSFENRPMNVLKFSTG--------GDKPAIWLDAGIHAREWVTQATA 72 (303)
T ss_dssp CCTTSCCCHHHHHHHHHHHHHHCTTTEEEEEEEECTTCCEEEEEEECCS--------SSCCEEEEECCSSTTCHHHHHHH
T ss_pred CCcCCCCCHHHHHHHHHHHHHHCCCceEEEeCcccCCCCeEEEEEEeCC--------CCCcEEEEEcccccCccccHHHH
Confidence 4689999999999999999999999999999999999999999999872 35899999999999999999999
Q ss_pred HHHHHHHHHhcCCChHHHHhhccceEEEEeccCcccchhhhccCCCCCCCCCC---CCCCccccCCCCCCcCCCc
Q psy11075 121 VFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVG---RKNAHGVDLNRNFPDQFEY 192 (195)
Q Consensus 121 l~~~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~~~~~---r~n~~GvDlNRnf~~~w~~ 192 (195)
+++++.|+.+|+.|+.++.+|++++|+|||++||||+++.+++++.|+..... +.||.|+||||||+++|+.
T Consensus 73 ~~l~~~L~~~y~~~~~~~~ll~~~~~~ivP~~NPDG~~~~~~~~~~wr~~r~~~~~~~~~~GvDLNRnfp~~w~~ 147 (303)
T 1dtd_A 73 LWTANKIVSDYGKDPSITSILDALDIFLLPVTNPDGYVFSQTKNRMWRKTRSKVSAGSLCVGVDPNRNWDAGFGG 147 (303)
T ss_dssp HHHHHHHHHHTTTSHHHHHHHHHCEEEEESCSCHHHHHHHHHTCTTCCSCCCBCTTTCSCBCCCGGGCSSSSTTC
T ss_pred HHHHHHHHHHhcCCHHHHHHHhCCeEEEEecccCccceeeeccccccccCCCCCCCCCCCcCcccCCCCCCcCcc
Confidence 99999999999889999999999999999999999999998888876543221 4589999999999999974
No 10
>1m4l_A Carboxypeptidase A; metalloproteinase, metalloexoproteinase, hydrolase; 1.25A {Bos taurus} SCOP: c.56.5.1 PDB: 1cpx_A 1arl_A 1f57_A 2rfh_A* 3i1u_A* 1arm_A 1ell_P 1elm_P 1ee3_P 1zlh_A 2abz_A 3hlp_A 3huv_A 1yme_A* 3fvl_A* 3fx6_A* 2ctc_A* 1hdq_A 2ctb_A* 3kgq_A* ...
Probab=100.00 E-value=1.8e-37 Score=260.13 Aligned_cols=146 Identities=25% Similarity=0.352 Sum_probs=134.4
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCCcEEEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHH
Q psy11075 40 GIDLQRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYAL 119 (195)
Q Consensus 40 ~~~~~~y~t~~ei~~~l~~l~~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~ 119 (195)
.++|..|++|+|+.++|++|+++||+++++.++|+|++||+|++++|++. ...||.|+|+||+||+|++|+++
T Consensus 6 ~~~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~eGr~i~~l~i~~~-------~~~~p~v~i~agiHg~E~~g~~~ 78 (307)
T 1m4l_A 6 TFNYATYHTLDEIYDFMDLLVAEHPQLVSKLQIGRSYEGRPIYVLKFSTG-------GSNRPAIWIDLGIHSREWITQAT 78 (307)
T ss_dssp TSCTTSCCCHHHHHHHHHHHHHHCTTTEEEEEEEECTTSCEEEEEEECSS-------CSSCCEEEEEECSSTTCHHHHHH
T ss_pred CCCccCCCCHHHHHHHHHHHHHHCCCceEEEeCcccCCCCeEEEEEEECC-------CCCCcEEEEEcccccCcccCHHH
Confidence 47899999999999999999999999999999999999999999999973 24689999999999999999999
Q ss_pred HHHHHHHHHHhcCCChHHHHhhccceEEEEeccCcccchhhhccCCCCC--CCCCCCCCCccccCCCCCCcCCCc
Q psy11075 120 MVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSL--DGYVGRKNAHGVDLNRNFPDQFEY 192 (195)
Q Consensus 120 ~l~~~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~--~~~~~r~n~~GvDlNRnf~~~w~~ 192 (195)
++++++.|+.+|+.|+.++.+|++++|+|||++||||+++.+++++.|+ +...+|.||.|+||||||+++|+.
T Consensus 79 ~~~l~~~L~~~y~~d~~~~~ll~~~~~~ivP~~NPDG~~~~~~~~r~wrk~r~~~~~~n~~GvDLNRnf~~~w~~ 153 (307)
T 1m4l_A 79 GVWFAKKFTEDYGQDPSFTAILDSMDIFLEIVTNPDGFAFTHSQNRLWRKTRSVTSSSLCVGVDANRNWDAGFGK 153 (307)
T ss_dssp HHHHHHHHHHHTTTSHHHHHHHHHCEEEEESCSCHHHHHHHHHTCTTCCSCCCBCTTCSCBCCCGGGCSSSSTTS
T ss_pred HHHHHHHHHHHhcCCHHHHHHHhcceEEEEecccCccceeeecCCcceecCCCCCCCCcccCCCCCCCCCccCcC
Confidence 9999999999998899999999999999999999999999988887664 334567899999999999999974
No 11
>1z5r_A Procarboxypeptidase B; exopeptidase, hydrolase; 1.40A {Sus scrofa} SCOP: c.56.5.1 PDB: 1zg7_A* 1zg8_A* 1zg9_A* 2jew_A* 2piy_A* 2piz_A* 2pj0_A* 2pj1_A* 2pj2_A* 2pj3_A* 2pj4_A* 2pj5_A* 2pj6_A* 2pj7_A* 2pj8_A* 2pj9_A* 2pja_A* 2pjb_A* 2pjc_A* 1zli_A ...
Probab=100.00 E-value=2.1e-37 Score=259.57 Aligned_cols=146 Identities=23% Similarity=0.380 Sum_probs=133.9
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCCcEEEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHH
Q psy11075 40 GIDLQRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYAL 119 (195)
Q Consensus 40 ~~~~~~y~t~~ei~~~l~~l~~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~ 119 (195)
.++|..|++|+|+.++|++|+++||+++++.++|+|++||+|++++|++. ...||.|+|+||+||+|++|+++
T Consensus 3 ~~~~~~y~~~~e~~~~l~~l~~~~p~~~~~~~iG~S~eGr~i~~l~i~~~-------~~~~p~v~i~agiHg~E~~g~~~ 75 (306)
T 1z5r_A 3 GHSYEKYNNWETIEAWTKQVTSENPDLISRTAIGTTFLGNNIYLLKVGKP-------GPNKPAIFMDCGFHAREWISHAF 75 (306)
T ss_dssp CCCTTSCCCHHHHHHHHHHHHHHCTTTEEEEEEEECTTSCEEEEEEESCC-------CSSCCEEEEECCSSTTCHHHHHH
T ss_pred CCCcccCCCHHHHHHHHHHHHHHCCCceEEEeccccCCCCeeEEEEeCCC-------CCCCceEEEEecccccchhhHHH
Confidence 46899999999999999999999999999999999999999999999873 14689999999999999999999
Q ss_pred HHHHHHHHHHhcCCChHHHHhhccceEEEEeccCcccchhhhccCCCCCC--CCCCCCCCccccCCCCCCcCCCc
Q psy11075 120 MVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLD--GYVGRKNAHGVDLNRNFPDQFEY 192 (195)
Q Consensus 120 ~l~~~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~--~~~~r~n~~GvDlNRnf~~~w~~ 192 (195)
++++++.|+.+|..|+.++.+|++++|+|||++||||+++.+++++.|+. ....|.||.|+||||||++.|..
T Consensus 76 ~~~l~~~L~~~~~~d~~~~~ll~~~~~~ivP~~NPDG~~~~~~~~~~wrk~r~~~~~~~~~GvDLNRnf~~~w~~ 150 (306)
T 1z5r_A 76 CQWFVREAVLTYGYESHMTEFLNKLDFYVLPVLNIDGYIYTWTKNRMWRKTRSTNAGTTCIGTDPNRNFDAGWCT 150 (306)
T ss_dssp HHHHHHHHHHHTTTSHHHHHHHHHCEEEEESCSCHHHHHHHHHTCTTCCSCCCBCTTSSCBCCCGGGCSSSSTTS
T ss_pred HHHHHHHHHHhhccCHHHHHHHhcCcEEEEeeeCCchhhheeccccccccCCCCCCCCCccCCccCCCCCCCCCC
Confidence 99999999999988999999999999999999999999999988877653 23346789999999999999964
No 12
>2bo9_A Carboxypeptidase A4; metallocarboxypeptidase, X-RAY endogenous protein inhibitor, metalloprotease carboxypeptidase, hydrolase; HET: NAG; 1.6A {Homo sapiens} SCOP: c.56.5.1 PDB: 4a94_A 2pcu_A*
Probab=100.00 E-value=8e-37 Score=256.26 Aligned_cols=147 Identities=21% Similarity=0.349 Sum_probs=132.9
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCCcEEEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHH
Q psy11075 40 GIDLQRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYAL 119 (195)
Q Consensus 40 ~~~~~~y~t~~ei~~~l~~l~~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~ 119 (195)
.++|..|++|+|+.++|++|+++||+++++.++|+|++||+|++++|++. + ...||.|+|+||+||+|++|+++
T Consensus 4 ~~~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~eGr~i~~l~i~~~---~---~~~~p~v~i~agiHg~E~~g~~~ 77 (308)
T 2bo9_A 4 NFNYGAYHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFSTG---K---GVRRPAVWLNAGIHSREWISQAT 77 (308)
T ss_dssp SCCTTSCCCHHHHHHHHHHHHHHSTTTEEEEEEEECTTCCEEEEEEECSS---T---TSCCCEEEEEECSSTTCHHHHHH
T ss_pred CCCcccCCCHHHHHHHHHHHHHHCCCcEEEEeccccCCCCeEEEEEecCC---C---CCCCceEEEEccccCcchhhHHH
Confidence 46899999999999999999999999999999999999999999999973 1 24689999999999999999999
Q ss_pred HHHHHHHHHHhcCCChHHHHhhccceEEEEeccCcccchhhhccCCCCCC--CCCCCCCCccccCCCCCCcCCCc
Q psy11075 120 MVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLD--GYVGRKNAHGVDLNRNFPDQFEY 192 (195)
Q Consensus 120 ~l~~~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~--~~~~r~n~~GvDlNRnf~~~w~~ 192 (195)
++++++.|+.+|+.|+.++.+|++++|+|||++||||+++.+++++.|+. ....+.||.|+||||||+..|..
T Consensus 78 ~~~l~~~L~~~y~~d~~~~~ll~~~~i~ivP~~NPDG~~~~~~~~r~wr~~r~~~~~~~~~GvDLNRnf~~~w~~ 152 (308)
T 2bo9_A 78 AIWTARKIVSDYQRDPAITSILEKMDIFLLPVANPDGYVYTQTQNRLWRKTRSRNPGSSCIGADPNRNWNASFAG 152 (308)
T ss_dssp HHHHHHHHHHHTTTSHHHHHHHHHCEEEEESCSCHHHHHHHHHTCTTCCSCCCBCTTCSSBCCCGGGCSSSSTTS
T ss_pred HHHHHHHHHHhhcCCHHHHHHHhcCeEEEEecccCccceeeeccccceecCCCCCCCCCccCCcCCCCCccccCC
Confidence 99999999999988999999999999999999999999999888876643 22334579999999999999973
No 13
>3prt_A Carboxypeptidase T; hydrolase; 1.66A {Thermoactinomyces vulgaris} PDB: 1obr_A 3qnv_A
Probab=100.00 E-value=1.3e-36 Score=256.55 Aligned_cols=147 Identities=31% Similarity=0.430 Sum_probs=127.7
Q ss_pred CCCCCCCHHHHHHHHHHHHHHCCCcEEEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHH
Q psy11075 42 DLQRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMV 121 (195)
Q Consensus 42 ~~~~y~t~~ei~~~l~~l~~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l 121 (195)
.+..|++|+||.++|++|+++||+++++.++|+|++||+|++++|++.++ ....||.|+|+||+||+|++|+++++
T Consensus 5 ~~~~y~~y~ei~~~l~~l~~~~p~~~~~~~iG~S~eGR~i~~l~i~~~~~----~~~~kp~v~i~~giHg~E~~g~~~~~ 80 (323)
T 3prt_A 5 YDSGYHNYNEMVNKINTVASNYPNIVKKFSIGKSYEGRELWAVKISDNVG----TDENEPEVLYTALHHAREHLTVEMAL 80 (323)
T ss_dssp GGTTSCCHHHHHHHHHHHHHHCTTTEEEEEEEECTTSCEEEEEEECTTTT----SCCSSCEEEEEECSSTTCTHHHHHHH
T ss_pred ccCCCCCHHHHHHHHHHHHHHCCCcEEEEeceeccCCCceEEEEecCCCC----CCCCCceEEEecccCcCccccHHHHH
Confidence 35789999999999999999999999999999999999999999997421 12468999999999999999999999
Q ss_pred HHHHHHHHhcCCChHHHHhhccceEEEEeccCcccchhhhcc--CCCCC--CCCCCCCCCccccCCCCCCcCCCc
Q psy11075 122 FLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEG--KCDSL--DGYVGRKNAHGVDLNRNFPDQFEY 192 (195)
Q Consensus 122 ~~~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~--~~~~~--~~~~~r~n~~GvDlNRnf~~~w~~ 192 (195)
++++.|+.+|+.|+.++++|++++|+|||++||||+++.++. ++.|+ +......+|.||||||||+++|+.
T Consensus 81 ~l~~~L~~~y~~d~~~~~ll~~~~~~ivP~~NPDG~~~~~~~~~~r~wR~nr~~~~~~~~~GvDLNRnf~~~w~~ 155 (323)
T 3prt_A 81 YTLDLFTQNYNLDSRITNLVNNREIYIVFNINPDGGEYDISSGSYKSWRKNRQPNSGSSYVGTDLNRNYGYKWGC 155 (323)
T ss_dssp HHHHHHHHTTTTSHHHHHHHTTCEEEEECCSCHHHHHHHHTTSSCCCCCSCSCCCTTCSCCCCCGGGCSSTTTTS
T ss_pred HHHHHHHHHhcCCHHHHHHHhCCeEEEEeeecCchheeeeccCCccccccCCCCCCCCcccccccccCCCcccCC
Confidence 999999999988999999999999999999999999997654 23332 222223458899999999999975
No 14
>1h8l_A Carboxypeptidase GP180 residues 503-882; hydrolase, zinc-dependent protease; HET: NAG BMA NDG GEM; 2.6A {Lophonetta specularioides} SCOP: b.3.2.1 c.56.5.1 PDB: 1qmu_A*
Probab=100.00 E-value=6.7e-37 Score=263.51 Aligned_cols=142 Identities=42% Similarity=0.721 Sum_probs=131.5
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCcEEEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHHH
Q psy11075 44 QRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFL 123 (195)
Q Consensus 44 ~~y~t~~ei~~~l~~l~~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~ 123 (195)
..|++|+||.++|++|+++||+++++.++|+|++||+|++++|++. ++.+..+||.|+++||+||+|+.|+++++++
T Consensus 8 ~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~eGr~i~~l~i~~~---~~~~~~~~p~v~i~~giHg~E~~g~~~~~~l 84 (380)
T 1h8l_A 8 FRHHHFSDMEIFLRRYANEYPSITRLYSVGKSVELRELYVMEISDN---PGIHEAGEPEFKYIGNMHGNEVVGRELLLNL 84 (380)
T ss_dssp CSCCCHHHHHHHHHHHHHHCTTTEEEEEEEECTTCCEEEEEEESSS---TTCCCTTCCEEEEECCSSTTCCHHHHHHHHH
T ss_pred CccCCHHHHHHHHHHHHHHCCCcEEEEECCcCCCCCEEEEEEEcCC---CccccCCCceEEEEcccCCCchhHHHHHHHH
Confidence 5899999999999999999999999999999999999999999873 2333457899999999999999999999999
Q ss_pred HHHHHHhcCCChHHHHhhccceEEEEeccCcccchhhhccCCCCCCCCCCCCCCccccCCCCCCcCCC
Q psy11075 124 IQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAHGVDLNRNFPDQFE 191 (195)
Q Consensus 124 ~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w~ 191 (195)
++.|+.+|+.|+.++.+|++++|+|+|++||||+++.+++++.|++ +|.||.|+||||||++.|.
T Consensus 85 ~~~L~~~y~~~~~~~~ll~~~~~~ivP~~NPDG~~~~~~~~~~w~k---~R~n~~GvDLNRnf~~~~~ 149 (380)
T 1h8l_A 85 IEYLCKNFGTDPEVTDLVQSTRIHIMPSMNPDGYEKSQEGDRGGTV---GRNNSNNYDLNRNFPDQFF 149 (380)
T ss_dssp HHHHHHHTTTCHHHHHHHHHCEEEEESCSCHHHHHTCCTTCSSCCT---TTSCTTSCCGGGCSCCSSS
T ss_pred HHHHHHhhCCCHHHHHHHhccEEEEEeccCCccceecccCCCCccC---CCCCCCCCcccCCCccccc
Confidence 9999999989999999999999999999999999999888877655 7899999999999999994
No 15
>3d4u_A Tafia, carboxypeptidase B2; protease-inhibitor complex, glycoprotein, hydrolase, metal-binding, metalloprotease, protease, secret zymogen; 1.70A {Bos taurus} PDB: 3lms_A
Probab=100.00 E-value=2e-36 Score=253.87 Aligned_cols=147 Identities=22% Similarity=0.350 Sum_probs=124.4
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCCcEEEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHH
Q psy11075 40 GIDLQRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYAL 119 (195)
Q Consensus 40 ~~~~~~y~t~~ei~~~l~~l~~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~ 119 (195)
.++|..|++|+|+.++|++|+++||+++++.++|+|++||+|++++|++. + ..+||.|+|+||+||+|++|+++
T Consensus 3 ~~~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~eGr~i~~l~i~~~---~---~~~~p~v~i~agiHg~E~~g~~~ 76 (309)
T 3d4u_A 3 SSYYEQYHSLNEIYSWIEVMTERYPDMVEKIHIGSSYEKYPLYVLKVSKK---E---QRAKNAMWIDCGIHAREWISPAF 76 (309)
T ss_dssp -CGGGSCCCHHHHHHHHHHHHHHSTTTEEEEEEEECTTCCEEEEEEECCC-----------CEEEEECCSSTTCTHHHHH
T ss_pred CCCcccCCCHHHHHHHHHHHHHHCCCceEEEeccccCCCCeeEEEEeCCC---C---CCCCceEEEEeccCCcchhhHHH
Confidence 36789999999999999999999999999999999999999999999962 1 24689999999999999999999
Q ss_pred HHHHHHHHHHhcCCChHHHHhhccceEEEEeccCcccchhhhccCCCCCCC--CCCCCCCccccCCCCCCc-CCCc
Q psy11075 120 MVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLDG--YVGRKNAHGVDLNRNFPD-QFEY 192 (195)
Q Consensus 120 ~l~~~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~~--~~~r~n~~GvDlNRnf~~-~w~~ 192 (195)
++++++.|+.+|+.|+.++.+|++++|+|||++||||+++.+++++.|+.. ...+.||.|+||||||+. .|..
T Consensus 77 ~~~l~~~L~~~~~~d~~~~~ll~~~~~~ivP~~NPDG~~~~~~~~~~wr~~R~~~~~~~~~GvDLNRnf~~~~w~~ 152 (309)
T 3d4u_A 77 CLWFVGSVTYYYGKEKMHTNLLKHMDFYIMPVVNVDGYDYTWKKDRMWRKNRSLHEKNACVGTDLNRNFASKHWCG 152 (309)
T ss_dssp HHHHHHHHHHSTTC-----CCSTTCEEEEESCSCHHHHHHHHHTCTTCCSCCCCCTTCSSCCCCGGGCSCCTTTTS
T ss_pred HHHHHHHHHHhhccCHHHHHHHhcCeEEEEeeeccchhheeecccceeecCCCCCCCCCCcCccccCCCChhhcCC
Confidence 999999999998888999999999999999999999999998888766432 223357999999999999 9963
No 16
>1uwy_A Carboxypeptidase M; metallopeptidase, GPI-anchor, metalloprotease, zinc, lipoprotein, hydrolase, structural proteomics in europe, spine; HET: NAG; 3.0A {Homo sapiens} SCOP: b.3.2.1 c.56.5.1
Probab=100.00 E-value=1.1e-35 Score=259.39 Aligned_cols=142 Identities=50% Similarity=0.840 Sum_probs=130.9
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCcEEEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHHH
Q psy11075 44 QRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFL 123 (195)
Q Consensus 44 ~~y~t~~ei~~~l~~l~~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~ 123 (195)
..|++|+||.++|++|+++||+++++.++|+|++||+|++++|++. ++.+..+||.|+++||+||+|+.|+++++++
T Consensus 3 f~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~eGr~i~~l~i~~~---~~~~~~~~p~v~i~agiHg~E~~g~~~~~~l 79 (426)
T 1uwy_A 3 FNYHRQEGMEAFLKTVAQNYSSVTHLHSIGKSVKGRNLWVLVVGRF---PKEHRIGIPEFKYVANMHGDETVGRELLLHL 79 (426)
T ss_dssp SSCCCHHHHHHHHHHHHHHTTTSEEEEEEEECTTSCEEEEEEESSS---TTSCBTTBCEEEEEECCSTTCCHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHCCCcEEEEEccccCCCCEEEEEEEcCC---CccccCCCceEEEecccCCCChhHHHHHHHH
Confidence 4799999999999999999999999999999999999999999974 2233457899999999999999999999999
Q ss_pred HHHHHHhcCCChHHHHhhccceEEEEeccCcccchhhhccCCCCCCCCCCCCCCccccCCCCCCcCCC
Q psy11075 124 IQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAHGVDLNRNFPDQFE 191 (195)
Q Consensus 124 ~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w~ 191 (195)
+++|+.+|+.|+.++.+|++++|+|+|++||||+++.+++++.|+ .+|.||.|+||||||++.|.
T Consensus 80 ~~~L~~~y~~d~~~~~ll~~~~i~ivP~~NPDG~~~~~~~~~~w~---~~R~n~~GvDLNRnf~~~w~ 144 (426)
T 1uwy_A 80 IDYLVTSDGKDPEITNLINSTRIHIMPSMNPDGFEAVKKPDCYYS---IGRENYNQYDLNRNFPDAFE 144 (426)
T ss_dssp HHHHHHHTTTSHHHHHHHHHCEEEEESCSCHHHHHHCSSCCSSCC---SCSSCTTSCCTTSCSCCSSS
T ss_pred HHHHHHhhcCCHHHHHHhcCcEEEEEEeeccchhheeeccCcccC---CCCCCCcCCCCCCCCCCCCC
Confidence 999999998899999999999999999999999999988887664 57889999999999999984
No 17
>2c1c_A Carboxypeptidase B; insect, metalloprotease, insensitive, plant inhibitors, hydrolase; 2.3A {Helicoverpa zea} SCOP: c.56.5.1
Probab=100.00 E-value=9.7e-36 Score=250.08 Aligned_cols=144 Identities=20% Similarity=0.278 Sum_probs=127.1
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCcEEEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHH
Q psy11075 41 IDLQRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALM 120 (195)
Q Consensus 41 ~~~~~y~t~~ei~~~l~~l~~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~ 120 (195)
++|..|++|+||.++|++|+++||+++++.++|+|++||+|++++|++. ......||.|+|+||+||+|++|++++
T Consensus 1 ~~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~eGr~i~~l~i~~~----~~~~~~~p~v~i~agiHg~E~~g~~~~ 76 (312)
T 2c1c_A 1 LPYDNYQELEVIDEYLDYIGEKYPDVATVVNAAESFEGRPIKYIKISTT----NFEDENKPVIFIDGGIHAREWISPPSV 76 (312)
T ss_dssp CCCSSCCCHHHHHHHHHHHHHHCTTTEEEEEEEECTTSCEEEEEEECTT----TTCCTTSCEEEEEECSSTTCTTHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCceEEEecccCCCCCeEEEEEecCC----CccCCCCCEEEEEeccCCCccccHHHH
Confidence 4689999999999999999999999999999999999999999999974 122356899999999999999999999
Q ss_pred HHHHHHHHHhcCCChHHHHhhccceEEEEeccCcccchhhhccCCCCCCCCC-----CCCCCccccCCCCCCcCCCc
Q psy11075 121 VFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYV-----GRKNAHGVDLNRNFPDQFEY 192 (195)
Q Consensus 121 l~~~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~~~~-----~r~n~~GvDlNRnf~~~w~~ 192 (195)
+++++.|+.++. + .++|++++|+|||++||||+++.+++++.|+.... +|.||.|+||||||+++|..
T Consensus 77 ~~l~~~L~~~~~-~---~~ll~~~~~~ivP~~NPDG~~~~~~~~~~wr~~R~~~~~~~~~~~~GvDLNRnf~~~w~~ 149 (312)
T 2c1c_A 77 TWAIHKLVEDVT-E---NDLLEKFDWILLPVVNPDGYKYTFTNERFWRKTRSTNNNPLSQICRGADGNRNFDFVWNS 149 (312)
T ss_dssp HHHHHHHHTSCC-C---THHHHHCEEEEESCSCHHHHHHHHHTCTTCCSCCCCCSSGGGGTSCCCCGGGCSSSSTTS
T ss_pred HHHHHHHHHhcc-c---HHHHhcCcEEEEecccCccceeeecccccccccCCCCCCCccccccCCCcccCCCcCCCC
Confidence 999999999876 4 47899999999999999999999888876643221 23679999999999999974
No 18
>2nsm_A Carboxypeptidase N catalytic chain; caroxypeptidase, zinc peptidase, transthyretin-like domain, processing, peptide modification, hydrolase; HET: NAG; 2.10A {Homo sapiens}
Probab=100.00 E-value=7.6e-35 Score=254.90 Aligned_cols=140 Identities=41% Similarity=0.684 Sum_probs=125.4
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCCcEEEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHH
Q psy11075 43 LQRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVF 122 (195)
Q Consensus 43 ~~~y~t~~ei~~~l~~l~~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~ 122 (195)
+..|++|+||.++|++|+++||+++++.++|+|++||+|++++|++. ++.+..+||.|+|+||+||+|++|++++++
T Consensus 3 ~~~y~~y~ei~~~l~~l~~~~p~~~~~~~iG~S~eGR~i~~l~i~~~---~~~~~~~kp~v~i~~giHg~E~~g~~~~~~ 79 (439)
T 2nsm_A 3 AFRHHRYDDLVRTLYKVQNECPGITRVYSIGRSVEGRHLYVLEFSDH---PGIHEPLEPEVKYVGNMHGNEALGRELMLQ 79 (439)
T ss_dssp CSSCCCHHHHHHHHHHHHHHSGGGEEEEEEEECTTSCEEEEEEECSS---TTSCCTTCCEEEEEECSSTTCCHHHHHHHH
T ss_pred CCCcCCHHHHHHHHHHHHHHCCCceEEEecCccCCCCEEEEEEECCC---CCccccCCceEEEecccCCCcHHHHHHHHH
Confidence 57899999999999999999999999999999999999999999973 333345789999999999999999999999
Q ss_pred HHHHHHHhcC-CChHHHHhhccceEEEEeccCcccchhhhcc---CCCCCCCCCCCCCCccccCCCCCCc
Q psy11075 123 LIQYLVLKDG-KDDRITKLLNSTDIYIVPSINPDGFAAAKEG---KCDSLDGYVGRKNAHGVDLNRNFPD 188 (195)
Q Consensus 123 ~~~~L~~~~~-~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~---~~~~~~~~~~r~n~~GvDlNRnf~~ 188 (195)
|++.|+.+|. +|+.++.+|++++|+|+|++||||+++..+. ++.|+ .+|.||+|+||||||++
T Consensus 80 l~~~L~~~y~~~d~~~~~ll~~~~i~ivP~~NPDG~~~~~~~~~~~~~wr---~~R~n~~GvDLNRnf~~ 146 (439)
T 2nsm_A 80 LSEFLCEEFRNRNQRIVQLIQDTRIHILPSMNPDGYEVAAAQGPNKPGYL---VGRNNANGVDLNRNFPD 146 (439)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHCEEEEESCSCHHHHHHHHHTTTTCCTTT---TTCSCTTSCCGGGCSCC
T ss_pred HHHHHHHhhccCCHHHHHHHhCceEEEEeCcCCChHHhhcccCCccCccc---CCccCCCCCcccccCcc
Confidence 9999999885 4899999999999999999999999997542 33333 47899999999999998
No 19
>3k2k_A Putative carboxypeptidase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; 2.49A {Burkholderia mallei atcc 23344}
Probab=99.97 E-value=2.9e-31 Score=229.51 Aligned_cols=134 Identities=25% Similarity=0.323 Sum_probs=119.8
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHHHHCCCcEEEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhH
Q psy11075 38 SAGIDLQRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGY 117 (195)
Q Consensus 38 ~~~~~~~~y~t~~ei~~~l~~l~~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~ 117 (195)
...++|..++||+++.++|+++++ +| .+++.++|+|++||+|++++|++.. ....+||.|+|+||+||+|+.|+
T Consensus 124 ~~~fa~~~pytY~~~~~~l~~l~~-~p-~v~~~~iG~S~eGR~I~~l~I~~~~----~~~~~kp~V~i~agiHg~E~~g~ 197 (403)
T 3k2k_A 124 SIHYAYFEPYSEERHSEFLGAVQQ-MP-QASVVELGRTVEGRPMSLVVLGTPD----EAGAAKKKVWIIARQHPGESMAE 197 (403)
T ss_dssp EEEEESSCCCCHHHHHHHHHHHTT-ST-TEEEEEEEECTTSCEEEEEEECCCC--------CCEEEEEEECSSTTCTHHH
T ss_pred cEEEEccCCCCHHHHHHHHHHHhh-CC-CeEEEEeccCCCCCEEEEEEEeCCC----CcCCCCCEEEEEeccCCCCccHH
Confidence 345789999999999999999984 77 6999999999999999999999841 12346899999999999999999
Q ss_pred HHHHHHHHHHHH--hcCCChHHHHhhccceEEEEeccCcccchhhhccCCCCCCCCCCCCCCccccCCCCCCc
Q psy11075 118 ALMVFLIQYLVL--KDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAHGVDLNRNFPD 188 (195)
Q Consensus 118 ~~~l~~~~~L~~--~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~ 188 (195)
++++.+++.|+. +|+.|+.++.+|++++|+|||++||||+++. .+|.||.|+||||||+.
T Consensus 198 ~~~~~ll~~L~~~~~y~~d~~~~~Ll~~~~~~ivP~lNPDG~~~~-----------~~R~n~~GvDLNRnf~~ 259 (403)
T 3k2k_A 198 WFIEGLVKRLVGWGDWSGDPVARKLYDHATFYIVPNMNPDGSVHG-----------NLRTNAAGANLNREWME 259 (403)
T ss_dssp HHHHHHHHHHTTCGGGTTCCHHHHHHHHEEEEEESCSCHHHHHTT-----------CSSCCTTSCCGGGCSSS
T ss_pred HHHHHHHHHHHhccccccCHHHHHHhhccEEEEEeccCchHHhhc-----------ccccCCCCCCccccccc
Confidence 999999999998 7778899999999999999999999999986 27999999999999995
No 20
>3l2n_A Peptidase M14, carboxypeptidase A; putative carboxypeptidase A, structural genomics, joint CENT structural genomics, JCSG; 2.39A {Shewanella denitrificans}
Probab=99.96 E-value=2.8e-30 Score=222.83 Aligned_cols=129 Identities=29% Similarity=0.365 Sum_probs=117.1
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHHHHCCCcEEEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhH
Q psy11075 38 SAGIDLQRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGY 117 (195)
Q Consensus 38 ~~~~~~~~y~t~~ei~~~l~~l~~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~ 117 (195)
...++|..++||+++.++|+++++ +| .+++.++|+|++||+|++++|+++ ..+||.|+|+|++||+|+.|.
T Consensus 122 ~~~fay~~pyty~~~~~~l~~l~~-~~-~v~~~~iG~S~eGR~i~~l~i~~~-------~~~kp~V~i~agiHg~E~~g~ 192 (395)
T 3l2n_A 122 AIQIAYFTPYSYERHLDLISAVQL-HP-LVSTEHLGLTLDGRDMTLVKVGDD-------DPSKKSIWITARQHPGETMAE 192 (395)
T ss_dssp EEEEESSCCCCHHHHHHHHHHGGG-ST-TEEEEEEEECTTSCEEEEEEESCC-------CTTSEEEEEEECSSTTCTHHH
T ss_pred cEEEEecCCCCHHHHHHHHHHHhc-CC-ceEEEEEEEcCCCCEEEEEEEecC-------CCCCcEEEEEcccCCCCchHH
Confidence 345788999999999999999985 66 699999999999999999999973 136899999999999999999
Q ss_pred HHHHHHHHHHHHhcCCChHHHHhhccceEEEEeccCcccchhhhccCCCCCCCCCCCCCCccccCCCCCCc
Q psy11075 118 ALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAHGVDLNRNFPD 188 (195)
Q Consensus 118 ~~~l~~~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~ 188 (195)
++++.+++.|+. ..|+.++.+|++++|+|||++||||+++. .+|+||.|+||||||+.
T Consensus 193 ~~~~~ll~~L~~--~~d~~~~~ll~~~~~~ivP~~NPDG~~~~-----------~~R~n~~GvDLNRnf~g 250 (395)
T 3l2n_A 193 WLVEGLLNQLLD--NDCPTSKALLDKANFYIVPNMNPDGSVRG-----------HLRTNAVGANLNREWQT 250 (395)
T ss_dssp HHHHHHHHHHTC--TTSHHHHHHHHHEEEEEESCSCHHHHHTT-----------CSSCCTTSCCGGGCSSS
T ss_pred HHHHHHHHHHhh--cCCHHHHHHhhCcEEEEEeccCCchhhhc-----------ccccccCCCCcccccCC
Confidence 999999999987 36889999999999999999999999986 27999999999999995
No 21
>4a37_A Metallo-carboxypeptidase; metallo-protease, hydrolase; 1.60A {Pseudomonas aeruginosa} PDB: 4a38_A 4a39_A*
Probab=99.96 E-value=6.6e-30 Score=220.26 Aligned_cols=129 Identities=26% Similarity=0.370 Sum_probs=117.0
Q ss_pred cCCCCCCCCCCHHHHHHHHHHHHHHCCCcEEEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhH
Q psy11075 38 SAGIDLQRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGY 117 (195)
Q Consensus 38 ~~~~~~~~y~t~~ei~~~l~~l~~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~ 117 (195)
...++|..++||+++.++|++++ ++| .+++.++|+|.+||+|++++|++. ..+||.|+|+||+||+|+.|.
T Consensus 117 ~~~fa~~~pyty~~~~~~l~~l~-~~p-~v~~~~iG~S~eGR~i~~l~i~~~-------~~~kp~v~i~agiHg~E~~g~ 187 (388)
T 4a37_A 117 EVRFAYFEPYSRERHARLVERAL-GIE-GVERLAVGTSVQGRDIELLRVRRH-------PDSHLKLWVIAQQHPGEHMAE 187 (388)
T ss_dssp CEEEESSCCCCHHHHHHHHHHHT-TST-TEEEEEEEECTTSCEEEEEEECCC-------TTCCEEEEEEECSSTTCTHHH
T ss_pred cEEEEccCCCCHHHHHHHHHHHH-hCC-CcEEEEeeecCCCCeEEEEEEecC-------CCCCcEEEEEcccCCCCchHH
Confidence 34578899999999999999998 467 699999999999999999999973 136899999999999999999
Q ss_pred HHHHHHHHHHHHhcCCChHHHHhhccceEEEEeccCcccchhhhccCCCCCCCCCCCCCCccccCCCCCCc
Q psy11075 118 ALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAHGVDLNRNFPD 188 (195)
Q Consensus 118 ~~~l~~~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~ 188 (195)
++++.+++.|+. ..|+.++.++++++|+|||++||||+++. .+|.||.|+||||||+.
T Consensus 188 ~~~~~li~~L~~--~~d~~~~~ll~~~~~~ivP~~NPDG~~~~-----------~~R~n~~GvDLNRnf~~ 245 (388)
T 4a37_A 188 WFMEGLIERLQR--PDDTEMQRLLEKADLYLVPNMNPDGAFHG-----------NLRTNAAGQDLNRAWLE 245 (388)
T ss_dssp HHHHHHHHHTTC--SSCHHHHHHHHHEEEEEESCSCHHHHHTT-----------CSSCCTTSCCGGGCSSS
T ss_pred HHHHHHHHHHhh--CCCHHHHhhhcCeEEEEEeccCchHHHhc-----------CCcccCCCcCCCCCCCC
Confidence 999999999987 36889999999999999999999999985 27999999999999985
No 22
>2qvp_A Uncharacterized protein; putative metallopeptidase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 2.00A {Shewanella amazonensis}
Probab=99.96 E-value=2.5e-30 Score=213.64 Aligned_cols=119 Identities=22% Similarity=0.313 Sum_probs=107.4
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCc-EEEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHH
Q psy11075 44 QRYYNSTELDAFILKTVKSYPHL-VRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVF 122 (195)
Q Consensus 44 ~~y~t~~ei~~~l~~l~~~~p~~-v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~ 122 (195)
..+++|+||.++|++|+++||++ +++.++|+|+ ||||+++++++. ..++|.|+|+||+||+|+.|++++++
T Consensus 16 ~~~~~~~ei~~~l~~l~~~~p~~~~~~~~iG~S~-grpl~~~~~~~~-------~~~~p~v~i~~giHg~E~~g~~~~~~ 87 (275)
T 2qvp_A 16 IFECQSTDIQRFYSLLAIETERLGLGSKILGQAG-HHPLYLLQSPGQ-------KAGLPNLLISAGFHGEESAGPWGLLH 87 (275)
T ss_dssp TTTEETTCHHHHHHHHHHHHHHHTCEEEEEEEET-TEEEEEEECSSC-------CTTSCEEEEEECSSTTCTHHHHHHHH
T ss_pred CccCCHHHHHHHHHHHHHHCCCCceEEEEecccC-CceeEEEECCCC-------CCCCcEEEEEccCCCCcHHHHHHHHH
Confidence 56689999999999999999999 9999999999 999998776542 24689999999999999999999999
Q ss_pred HHHHHHHhcCCChHHHHhhccceEEEEeccCcccchhhhccCCCCCCCCCCCCCCccccCCCCCCcCCC
Q psy11075 123 LIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAHGVDLNRNFPDQFE 191 (195)
Q Consensus 123 ~~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w~ 191 (195)
+++.|+ ..++++.+|+|+|++||||+++. +|.||.|+||||||+++|.
T Consensus 88 l~~~l~---------~~~l~~~~~~ivP~~NPdG~~~~------------~R~n~~g~DlNR~f~~~~~ 135 (275)
T 2qvp_A 88 FLSQLD---------GELFKRVNLSVLPLVNPTGFAKG------------HRFNELGENPNRGFFIENG 135 (275)
T ss_dssp HHHHCC---------SGGGGTCEEEEECCSCHHHHHHT------------CSSCTTSCCTTSCCEEETT
T ss_pred HHHHHH---------HHHhcCCeEEEEECcChHHhhcc------------cccCCCCccCCCCCCcccc
Confidence 999987 24678999999999999999986 7899999999999998886
No 23
>3b2y_A Metallopeptidase containing CO-catalytic metalloa site; metallopeptidase containing CO-catalytic metalloactive site; 1.74A {Shewanella denitrificans OS217} PDB: 3ieh_A*
Probab=99.90 E-value=3.4e-24 Score=176.93 Aligned_cols=117 Identities=21% Similarity=0.303 Sum_probs=95.3
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCcEEEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHHH
Q psy11075 44 QRYYNSTELDAFILKTVKSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFL 123 (195)
Q Consensus 44 ~~y~t~~ei~~~l~~l~~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~ 123 (195)
-.|.+++++.+.|.+.+++.. ++...+|.+ +|+||.+++.+.. ..+||+|+++||+||+|+.|+++++.+
T Consensus 20 ~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~-~~~pl~~i~~~~~-------~~~~p~v~i~~giHg~E~~g~~~~~~~ 89 (275)
T 3b2y_A 20 CQSNDIDAFYAQLAEEVNRLG--LKKNTLGSV-DSFAINLYQSASQ-------RSDLPSLLISSGFHGEEAAGPWGMLHF 89 (275)
T ss_dssp EETTCHHHHHHHHHHHHHHHT--CEEEEEEEE-TTEEEEEEECSSC-------CTTSCEEEEEECSSTTCTHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHhccccc--eEEEEeecc-CCeeEEEEECCCC-------CCCCCEEEEEeccCCCcHHHHHHHHHH
Confidence 446788888888888777653 567777877 6899987755431 246899999999999999999999999
Q ss_pred HHHHHHhcCCChHHHHhhccceEEEEeccCcccchhhhccCCCCCCCCCCCCCCccccCCCCCCcCCC
Q psy11075 124 IQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAHGVDLNRNFPDQFE 191 (195)
Q Consensus 124 ~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w~ 191 (195)
+++|. ..++++++|+|+|++||||++.. .|.||.|+||||||+..|.
T Consensus 90 ~~~l~---------~~ll~~~~i~ivP~~NPdG~~~~------------~R~n~~gvDLNRnf~~~~~ 136 (275)
T 3b2y_A 90 LRGLQ---------PALFERVNLSLLPLVNPTGFKAG------------HRFNRFGENPNRGFTLENG 136 (275)
T ss_dssp HHHCC---------GGGGGTCEEEEECCSCHHHHHTT------------SSSCTTSCCTTSCCCC---
T ss_pred HHHHh---------HHHHcCceEEEEeCCChhHhhcC------------ccCCCCCCccCcCCCCCCC
Confidence 99982 37889999999999999999964 6889999999999999874
No 24
>4axv_A MPAA; hydrolase; HET: MSE; 2.17A {Vibrio harveyi}
Probab=99.89 E-value=1.9e-24 Score=175.29 Aligned_cols=95 Identities=32% Similarity=0.359 Sum_probs=84.8
Q ss_pred HCCCcEEEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHHHHHHHHHhcCCChHHHHhh
Q psy11075 62 SYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLL 141 (195)
Q Consensus 62 ~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~~~~L~~~~~~d~~~~~ll 141 (195)
+++.+++..++|+|.+||||++++++. .+||+++|+||+||+|+.|.++++.+++.|+.
T Consensus 16 r~~~~~~~~~~G~S~~g~pl~~~~~~~---------~~~~~~l~~~g~Hg~E~~g~~~~~~~~~~l~~------------ 74 (243)
T 4axv_A 16 RAAFLITPTSYGKSVLGAPLLYFPAQV---------ESNSRGLILAGTHGDETASIAGLSCALRSLPA------------ 74 (243)
T ss_dssp TTSCSSCCEEEEECTTSCEEEEBCCCS---------CCTTCCEEEECSSTTCCHHHHHHHHHHHHSCG------------
T ss_pred hcCCccCeeeeeecCCCCcEEEEECCC---------CCCCEEEEECCcCCCCHHHHHHHHHHHHhhhh------------
Confidence 467889999999999999999988765 25789999999999999999999999998875
Q ss_pred ccceEEEEeccCcccchhhhccCCCCCCCCCCCCCCccccCCCCCCcC
Q psy11075 142 NSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAHGVDLNRNFPDQ 189 (195)
Q Consensus 142 ~~~~l~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~ 189 (195)
++..++|||++||||++.. .|.|++|+|||||||..
T Consensus 75 ~~~~~~~ip~~Npdg~~~~------------~r~~~~g~dlNR~fp~~ 110 (243)
T 4axv_A 75 ECLKHDVILSMNPDANQLG------------TRANANQVDLNRAFPTQ 110 (243)
T ss_dssp GGCCSEEESCSCHHHHHTT------------CSSCTTSBCGGGCSCCT
T ss_pred cCceEEEEEeEcccchhhc------------cccCCCCCChhhcCCCC
Confidence 3567899999999999875 79999999999999964
No 25
>3fmc_A Putative succinylglutamate desuccinylase / aspart; S genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Shewanella amazonensis} PDB: 3lwu_A*
Probab=99.59 E-value=2.2e-15 Score=128.78 Aligned_cols=101 Identities=27% Similarity=0.325 Sum_probs=79.4
Q ss_pred EEEEEccccCCCceeeE--EEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHHHHHHHHHhcCCChHHHHhhccc
Q psy11075 67 VRAETIGKSVQGRNLWA--VEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNST 144 (195)
Q Consensus 67 v~~~~iG~S~~Gr~i~~--~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~~~~L~~~~~~d~~~~~ll~~~ 144 (195)
++...++++++|+++.+ .+++.. ...|+|+|+||+||+|+.|.+++..+++.|.... .+.
T Consensus 6 ~~~~~~~~~~~G~~~~~~v~~~~g~--------~~gp~v~i~agiHG~E~~G~~~~~~l~~~l~~~~----------~~g 67 (368)
T 3fmc_A 6 KHEVRVGELAAGQPLSLPVYRFKGK--------GAGPSVYIQANVHGAEVQGNAVIYQLMKLLEHYE----------LLG 67 (368)
T ss_dssp EEEEEEEECTTSCEEEEEEEEECCC--------SSCCCEEEEECSSTTCTHHHHHHHHHHHHHTTSC----------BSS
T ss_pred EEEEEcccCCCCCeeEEEEEEEeCC--------CCCCEEEEECCCCCCCHHHHHHHHHHHHhhhhhc----------cCC
Confidence 68889999999997654 555541 2568999999999999999999999999985321 245
Q ss_pred eEEEEeccCcccchhhhccCCCCCCCCCCCCCC-ccccCCCCCCcCCC
Q psy11075 145 DIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNA-HGVDLNRNFPDQFE 191 (195)
Q Consensus 145 ~l~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~-~GvDlNRnf~~~w~ 191 (195)
.++++|++||+|++...... ..+|.+. .|+||||+||..+.
T Consensus 68 ~i~ivP~~Np~g~~~~~~~~------~~~R~~~~d~~DLNR~Fpg~~~ 109 (368)
T 3fmc_A 68 DISLVPLANPLGINQKSGEF------TLGRFDPITGVNWNREYLDHGF 109 (368)
T ss_dssp CEEEECSCCHHHHTCEETTE------ECCSBCTTTCCBGGGCCCCCCS
T ss_pred CEEEEECcCHHHHHhhCccc------cccccCCCCCCCCCCCCCCCcc
Confidence 79999999999998753211 1247776 89999999998765
No 26
>2qj8_A MLR6093 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.00A {Mesorhizobium loti}
Probab=99.57 E-value=8.4e-15 Score=123.58 Aligned_cols=88 Identities=28% Similarity=0.354 Sum_probs=70.0
Q ss_pred ccccCCC--ceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHHHHHHHHHhcCCChHHHHhhccceEEEE
Q psy11075 72 IGKSVQG--RNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIV 149 (195)
Q Consensus 72 iG~S~~G--r~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~~~~L~~~~~~d~~~~~ll~~~~l~ii 149 (195)
++.+..| ..+++++++.. .+|+|+|+||+||+|+.|.+++..+++.|... ..+..++++
T Consensus 24 ~~~~~~~~~~~~pv~~~~~~---------~gp~v~i~agiHG~E~~g~~~~~~ll~~l~~~----------~~~~~~~iv 84 (332)
T 2qj8_A 24 VPKGADCEALSLPVFSCNRG---------EGPSLLITGGNHGNELQGPILARRLVKWLPEA----------QRCGRIIIV 84 (332)
T ss_dssp ECCCSSSCCEEEEEEEEEES---------SSCEEEEEECSSTTCCHHHHHHHHHHHHHHHH----------BCSEEEEEE
T ss_pred CccCCCCCccceeEEEEeCC---------CCCEEEEECCCCCCCHHHHHHHHHHHHhhhhh----------ccCcEEEEE
Confidence 3444333 46777777652 24899999999999999999999999998753 136789999
Q ss_pred eccCcccchhhhccCCCCCCCCCCCCC-CccccCCCCCCcCC
Q psy11075 150 PSINPDGFAAAKEGKCDSLDGYVGRKN-AHGVDLNRNFPDQF 190 (195)
Q Consensus 150 P~~NPDG~~~~~~~~~~~~~~~~~r~n-~~GvDlNRnf~~~w 190 (195)
|++||||++.. .|.+ +.|+||||+|+...
T Consensus 85 P~~Np~g~~~~------------~R~~~~~~~DLNR~f~~~~ 114 (332)
T 2qj8_A 85 PEINPLAVQAW------------TRNTPIDGKNLNRVFPGRS 114 (332)
T ss_dssp SCSCHHHHHHT------------CSSCTTTCCCTTTTTTCCT
T ss_pred eCcCHHHHHhC------------cCCCccCCCcccccCCCCC
Confidence 99999999985 6777 49999999999743
No 27
>3cdx_A Succinylglutamatedesuccinylase/aspartoacylase; structural genomics, PSI-2, protein structure initiative; 2.10A {Rhodobacter sphaeroides 2}
Probab=99.53 E-value=1.1e-14 Score=123.86 Aligned_cols=81 Identities=21% Similarity=0.325 Sum_probs=65.8
Q ss_pred ceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHHHHHHHHHhcCCChHHHHhhccceEEEEeccCcccch
Q psy11075 79 RNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFA 158 (195)
Q Consensus 79 r~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~ 158 (195)
..+++++++.. ..|+|+|+||+||+|+.|.+++..+++.|.... .+.+|+|||++||||++
T Consensus 41 ~~~pv~~~~~~---------~gp~v~i~agiHG~E~~g~~~~~~ll~~l~~~~----------~~g~l~ivP~~Np~g~~ 101 (354)
T 3cdx_A 41 VEIPITVVKNG---------SGPTVLLTGGVHGDEYEGQIAISDLARRLRPEE----------VQGRVIMLPAVNMPAIQ 101 (354)
T ss_dssp EEEEEEEEEES---------SCCEEEEEECSSTTCCHHHHHHHHHHHHCCGGG----------CSEEEEEESCSCHHHHH
T ss_pred eccCEEEEeCC---------CCCEEEEECCCCCCCHHHHHHHHHHHHHhhhcc----------cCCEEEEEECcCHHHHH
Confidence 35666666652 248999999999999999999999999985421 25679999999999999
Q ss_pred hhhccCCCCCCCCCCCCCC-ccccCCCCCCcCC
Q psy11075 159 AAKEGKCDSLDGYVGRKNA-HGVDLNRNFPDQF 190 (195)
Q Consensus 159 ~~~~~~~~~~~~~~~r~n~-~GvDlNRnf~~~w 190 (195)
.. .|.|+ .|+||||+|+..+
T Consensus 102 ~~------------~R~~~~~~~DLNR~f~~~~ 122 (354)
T 3cdx_A 102 SD------------TRLSPVDGRDINRCFPGDP 122 (354)
T ss_dssp HT------------CSSCTTTCCCGGGSTTCCT
T ss_pred hh------------CCCCCCCCccccccCCCCC
Confidence 85 67775 8999999999754
No 28
>3na6_A Succinylglutamate desuccinylase/aspartoacylase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.00A {Ruegeria SP}
Probab=99.42 E-value=2.4e-13 Score=114.74 Aligned_cols=82 Identities=24% Similarity=0.257 Sum_probs=66.8
Q ss_pred ceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHHHHHHHHHhcCCChHHHHhhccceEEEEeccCcccch
Q psy11075 79 RNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFA 158 (195)
Q Consensus 79 r~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~ 158 (195)
-.+++..+..+ ..|+|+|+||+||+|+.|.+++..+++.|.... ....++++|++||+|+.
T Consensus 37 ~~~pv~~~~~g---------~gp~v~i~agiHG~E~~G~~~~~~l~~~l~~~~----------~~g~~~ivP~~Np~g~~ 97 (331)
T 3na6_A 37 VMIPITVIQNG---------AGKTALLTGANHGDEYEGPVALQELAATTRAED----------VTGRLIIVPYFNYPAFR 97 (331)
T ss_dssp EEEEEEEEEES---------SCCEEEEECCSSTTCCHHHHHHHHHHHHCCGGG----------CSEEEEEESCSSHHHHH
T ss_pred eEeeEEEEecC---------CCCEEEEECCCCCCCHHHHHHHHHHHHHhhHHh----------cCCcEEEEECcCHHHHH
Confidence 35777777762 158999999999999999999999998875421 24569999999999998
Q ss_pred hhhccCCCCCCCCCCCCCC-ccccCCCCCCcCCC
Q psy11075 159 AAKEGKCDSLDGYVGRKNA-HGVDLNRNFPDQFE 191 (195)
Q Consensus 159 ~~~~~~~~~~~~~~~r~n~-~GvDlNRnf~~~w~ 191 (195)
.. .|.+. .|+||||+|+....
T Consensus 98 ~~------------~R~~~~~~~DLNR~Fp~~~~ 119 (331)
T 3na6_A 98 AS------------ARTSPIDRGNLNRAFPGRPD 119 (331)
T ss_dssp TT------------SSSCTTTCCCGGGCTTCCTT
T ss_pred hC------------cccCCCCCCchHhhCCCCCC
Confidence 75 68887 99999999997654
No 29
>1yw6_A Succinylglutamate desuccinylase; alpha-beta protein., structural genomics, PSI, protein structure initiative; 3.10A {Escherichia coli} SCOP: c.56.5.7
Probab=99.40 E-value=3.7e-13 Score=113.71 Aligned_cols=110 Identities=21% Similarity=0.261 Sum_probs=75.9
Q ss_pred HHHHHHHH-HHHHHCCCcEEEEEccc--cCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHHHHHH
Q psy11075 50 TELDAFIL-KTVKSYPHLVRAETIGK--SVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFLIQY 126 (195)
Q Consensus 50 ~ei~~~l~-~l~~~~p~~v~~~~iG~--S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~~~~ 126 (195)
+++.++|. .|+.++|........|. ++.|+.+ +.+++. ...+|+|+|+||+||+|..|.+++..+++.
T Consensus 4 ~~~~~fl~~~l~~~~~~~~~~~~~~~~~~~~g~gv--~~~~p~-------~~~gp~v~i~agiHGnE~~G~~~~~~ll~~ 74 (335)
T 1yw6_A 4 DPMDNFLALTLTGKKPVITEREINGVRWRWLGDGV--LELTPL-------TPPQGALVISAGIHGNETAPVEMLDALLGA 74 (335)
T ss_dssp CHHHHHHHHHHHCCCCSBCEEESSSEEEEEEETTE--EEEEES-------SCCSCEEEEEECSSSSCCHHHHHHHHHHHH
T ss_pred CchhhHHHHHhcCCCcccccccCCCeEEEEecCcE--EEecCC-------CCCCCEEEEEcCCCCCCHHHHHHHHHHHHh
Confidence 57888888 68888885322113343 4555554 444442 123689999999999999999999999999
Q ss_pred HHHhcCCChHHHHhhccceEEEEeccCcccchhhhccCCCCCCCCCCCCCCccccCCCCCCcCCC
Q psy11075 127 LVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAHGVDLNRNFPDQFE 191 (195)
Q Consensus 127 L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w~ 191 (195)
|.... +..+.. +++|++||+|+... .|.+ +.||||+|+..+.
T Consensus 75 l~~~~--------~~~~~~-v~vp~~Np~g~~~~------------~R~~--~~DLNR~Fpg~~~ 116 (335)
T 1yw6_A 75 ISHGE--------IPLRWR-LLVILGNPPALKQG------------KRYC--HSDMNRMFGGRWQ 116 (335)
T ss_dssp HHTTS--------SCCCSE-EEEECCSHHHHTSC------------CC-----CCSTTSSSSSSC
T ss_pred hhhcc--------ccCceE-EEEEccCHHHHHhC------------CCCC--CCCcccccCCccc
Confidence 86421 122333 45799999999874 4554 6899999998764
No 30
>2bco_A Succinylglutamate desuccinylase; NESG, VPR14, structural genomics, PSI, protein structure initiative; 2.33A {Vibrio parahaemolyticus} SCOP: c.56.5.7 PDB: 2g9d_A
Probab=99.39 E-value=1e-13 Score=117.75 Aligned_cols=112 Identities=19% Similarity=0.130 Sum_probs=85.3
Q ss_pred HHHHHHH-HHH---HHCCCcEEEEEccccCCCceeeEEEEeecCCCCCCCCCCcceEEEeecccCCCchhHHHHHHHHHH
Q psy11075 51 ELDAFIL-KTV---KSYPHLVRAETIGKSVQGRNLWAVEITHDVDSPDGRTLMKPMFKYVANMHGDETVGYALMVFLIQY 126 (195)
Q Consensus 51 ei~~~l~-~l~---~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~~~~k~~v~i~~g~Hg~E~~g~~~~l~~~~~ 126 (195)
++.++|. .|+ .+.|. .+....|.+++.+...++.+++.. ....+|+|+|+||+||+|..|.+++..+++.
T Consensus 6 ~~~~fl~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~p~~-----~~~~gp~vlI~aGiHGnE~~G~~~~~~ll~~ 79 (350)
T 2bco_A 6 FRQSFLTDTLDVHIDVAPA-EQVLSNGVQLKLYQRGVLEVIPEN-----PTQETKNIIISCGIHGDETAPMELVDSIIKD 79 (350)
T ss_dssp SSSCHHHHHHCSCC-CCCE-EEECTTSCEEEEEETTEEEEECSS-----CCTTCCEEEEEECSSTTBCHHHHHHHHHHHH
T ss_pred hhHhHHHHHhhhccCCCcc-ccccCCceEEEEECCeEEEEeCCc-----cCCCCCEEEEEcCCCCCcHhHHHHHHHHHHH
Confidence 3456677 466 56674 555567888888888899998731 1123689999999999999999999999999
Q ss_pred HHHhcCCChHHHHhhccceEEEEecc-CcccchhhhccCCCCCCCCCCCCCCccccCCCCCCcCCCc
Q psy11075 127 LVLKDGKDDRITKLLNSTDIYIVPSI-NPDGFAAAKEGKCDSLDGYVGRKNAHGVDLNRNFPDQFEY 192 (195)
Q Consensus 127 L~~~~~~d~~~~~ll~~~~l~iiP~~-NPDG~~~~~~~~~~~~~~~~~r~n~~GvDlNRnf~~~w~~ 192 (195)
|.... ....+.++|++ ||+|+... .|.+ +.||||+|+..+..
T Consensus 80 l~~~~----------~~g~~~vvp~~~Np~a~~~~------------~R~~--~~DLNR~Fpg~~~g 122 (350)
T 2bco_A 80 IESGF----------QKVDARCLFIIAHPESTLAH------------TRFL--EENLNRLFDEKEHE 122 (350)
T ss_dssp HHTTC----------SCCCSEEEEEECCHHHHHTT------------SSCS--SSCGGGCSSSSCCC
T ss_pred hHhhc----------cCceEEEEEEeCCHHHHHhC------------CccC--CCCCCCCCCCCCCC
Confidence 86421 23567889999 99999875 5655 89999999987763
No 31
>1yw4_A Succinylglutamate desuccinylase; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.00A {Chromobacterium violaceum} SCOP: c.56.5.7
Probab=99.12 E-value=4.5e-11 Score=101.13 Aligned_cols=69 Identities=19% Similarity=0.190 Sum_probs=57.2
Q ss_pred cceEEEeecccCCCchhHHHHHHHHHHHHHhcCCChHHHHhhccceEEEEeccCcccchhhhccCCCCCCCCCCCCCCcc
Q psy11075 100 KPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSINPDGFAAAKEGKCDSLDGYVGRKNAHG 179 (195)
Q Consensus 100 k~~v~i~~g~Hg~E~~g~~~~l~~~~~L~~~~~~d~~~~~ll~~~~l~iiP~~NPDG~~~~~~~~~~~~~~~~~r~n~~G 179 (195)
.|+|+|+||+||+|..|.+++..+++.+.... +..+.++. +|++||.|+... .|. .+
T Consensus 46 gp~v~i~agiHGnE~~G~~~~~~l~~~l~~~~--------l~~~g~v~-vp~~Np~a~~~~------------~R~--~~ 102 (341)
T 1yw4_A 46 ADSVLLSCGVHGNETAPIEVVDGMLTDIAAGQ--------LALNCRLL-VMFANLDAIRQG------------VRY--GN 102 (341)
T ss_dssp SCEEEEEECSSTTCCHHHHHHHHHHHHHHHTS--------SCCCSEEE-EEECCHHHHHHT------------SSC--SS
T ss_pred CCEEEEECCCCCCchHHHHHHHHHHHhhhhhc--------ccCceEEE-EEEECHHHHHhc------------CCC--Cc
Confidence 58999999999999999999999999987531 12356676 999999999885 565 68
Q ss_pred ccCCCCCCcCCC
Q psy11075 180 VDLNRNFPDQFE 191 (195)
Q Consensus 180 vDlNRnf~~~w~ 191 (195)
.||||.|+..+.
T Consensus 103 ~DlNR~Fpg~~~ 114 (341)
T 1yw4_A 103 YDMNRLFNGAHA 114 (341)
T ss_dssp SCGGGSTTTGGG
T ss_pred CCcCcCCCcccc
Confidence 999999998654
No 32
>2gu2_A ASPA protein; aspartoacylase family, aminoacylase-2, ACY-2, ACY2_RAT, STRU genomics, PSI, protein structure initiative; HET: MSE; 1.80A {Rattus norvegicus} SCOP: c.56.5.7 PDB: 2q4z_A 2i3c_A 2q51_A 2o4h_A* 2o53_A
Probab=99.03 E-value=9.7e-11 Score=97.96 Aligned_cols=66 Identities=23% Similarity=0.295 Sum_probs=52.1
Q ss_pred CcceEEEeecccCCCchhHHHHHHHHHHHHHhcCCChHHHHhhccceEEEEecc-CcccchhhhccCCCCCCCCCCCCCC
Q psy11075 99 MKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPSI-NPDGFAAAKEGKCDSLDGYVGRKNA 177 (195)
Q Consensus 99 ~k~~v~i~~g~Hg~E~~g~~~~l~~~~~L~~~~~~d~~~~~ll~~~~l~iiP~~-NPDG~~~~~~~~~~~~~~~~~r~n~ 177 (195)
..|+|+|+||+||+|..|.+++..+++.+ ..+.+-++.++|++ ||+|+... .|.
T Consensus 9 ~gp~v~I~agiHGnE~~G~~~~~~l~~~~-----------~~~~~g~v~vvP~~~Np~a~~~~------------~R~-- 63 (312)
T 2gu2_A 9 PIKKIAIFGGTHGNELTGVFLVTHWLKNG-----------AEVHRAGLEVKPFITNPRAVEKC------------TRY-- 63 (312)
T ss_dssp CCCEEEEEECSSTTCHHHHHHHHHHHHCG-----------GGGCCTTCEEEEEESCHHHHHTT------------SSC--
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHhCc-----------hhhccCeEEEEEeCCCHHHHHhC------------CCC--
Confidence 35789999999999999999776554332 13344679999999 99999874 565
Q ss_pred ccccCCCCCCcC
Q psy11075 178 HGVDLNRNFPDQ 189 (195)
Q Consensus 178 ~GvDlNRnf~~~ 189 (195)
.+.||||.|+..
T Consensus 64 ~~~DLNR~Fpg~ 75 (312)
T 2gu2_A 64 IDCDLNRVFDLE 75 (312)
T ss_dssp SSSCGGGCCSHH
T ss_pred cCCCcccCCCCc
Confidence 789999999864
No 33
>3nh4_A Aspartoacylase-2; mercapturates, hydrolase; 2.00A {Mus musculus} SCOP: c.56.5.0 PDB: 3nh5_A 3nfz_A 3nh8_A*
Probab=98.79 E-value=2.8e-09 Score=89.47 Aligned_cols=68 Identities=26% Similarity=0.255 Sum_probs=53.5
Q ss_pred CcceEEEeecccCCCchhHHHHHHHHHHHHHhcCCChHHHHhhccceEEEEec-cCcccchhhhccCCCCCCCCCCCCCC
Q psy11075 99 MKPMFKYVANMHGDETVGYALMVFLIQYLVLKDGKDDRITKLLNSTDIYIVPS-INPDGFAAAKEGKCDSLDGYVGRKNA 177 (195)
Q Consensus 99 ~k~~v~i~~g~Hg~E~~g~~~~l~~~~~L~~~~~~d~~~~~ll~~~~l~iiP~-~NPDG~~~~~~~~~~~~~~~~~r~n~ 177 (195)
..|+|+|+||+||+|..|.+++..+++.... . ..-.+.++|+ .||.|+... .|..
T Consensus 19 ~gp~v~i~agiHGnE~~Gi~~~~~l~~~~~~----------~-~~g~v~~~p~~~Np~a~~~~------------~R~~- 74 (327)
T 3nh4_A 19 PLLRVAVTGGTHGNEMCGVYLARYWLQNPGE----------L-QRPSFSAMPVLANPAATAAC------------CRYL- 74 (327)
T ss_dssp CCCSEEEEECSSTTCHHHHHHHHHHHHCGGG----------G-EETTEEEEEEESCHHHHHHT------------SSCS-
T ss_pred CCCEEEEEecccCCchHHHHHHHHHHhcchh----------h-cCCcEEEEEeccCHHHHHhc------------CCCC-
Confidence 4588999999999999999999988876311 1 2345888887 999999875 4654
Q ss_pred ccccCCCCCCcCCC
Q psy11075 178 HGVDLNRNFPDQFE 191 (195)
Q Consensus 178 ~GvDlNRnf~~~w~ 191 (195)
..||||.|+-.+.
T Consensus 75 -~~DLNR~Fpg~~~ 87 (327)
T 3nh4_A 75 -DRDLNRSCTLTFL 87 (327)
T ss_dssp -SSCGGGCCSHHHH
T ss_pred -CCCcccCCCCccc
Confidence 5799999997654
No 34
>1vjq_A Designed protein; structural genomics, engineered protein, PSI, protein struct initiative, structural genomics of pathogenic protozoa CONS SGPP; 2.10A {} SCOP: k.43.1.1
Probab=84.92 E-value=0.22 Score=32.26 Aligned_cols=36 Identities=6% Similarity=0.061 Sum_probs=26.2
Q ss_pred eeeccchhh-hhhhhccCCCceeEEecCChhhHHHhc
Q psy11075 2 TLIVPSLSL-LLCHVTLSTAADYYFDFDDLTGLEDAD 37 (195)
Q Consensus 2 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 (195)
-||||+-.+ -+...+...+++|++.++|+++++++.
T Consensus 42 di~V~p~~~~~f~~~L~~~~i~~~v~i~dvq~~i~~~ 78 (79)
T 1vjq_A 42 VILIPSDMVEWFLEMLKAKGIPFTVYVEEGGSENKYF 78 (79)
T ss_dssp EEEECGGGHHHHHHHHHHTTCCEEEEEEEEEC-----
T ss_pred EEEECHHHHHHHHHHHHHCCCcEEEEehhHHHHHhhh
Confidence 478999866 556677789999999999999998753
No 35
>1bde_A VPR protein; AIDS, HIV, viral protein, VPR fragment, helix; NMR {Synthetic} SCOP: j.11.1.1 PDB: 1dsj_A
Probab=58.70 E-value=4.5 Score=21.98 Aligned_cols=20 Identities=25% Similarity=0.446 Sum_probs=17.4
Q ss_pred cCCCchhHHHHHHHHHHHHH
Q psy11075 110 HGDETVGYALMVFLIQYLVL 129 (195)
Q Consensus 110 Hg~E~~g~~~~l~~~~~L~~ 129 (195)
||+-|.|+++++.+++.++-
T Consensus 2 yGDTw~GveaiiriLQq~Lf 21 (35)
T 1bde_A 2 YGDTWAGVEAIIRILQQLLF 21 (35)
T ss_dssp CCHHHHHHHHHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHH
Confidence 78889999999999988764
No 36
>2gjf_A Designed protein; procarboxypeptidase, de novo protein; NMR {}
Probab=37.23 E-value=9.6 Score=24.05 Aligned_cols=27 Identities=7% Similarity=0.242 Sum_probs=16.5
Q ss_pred eeccchhh-hhhhhccCCCceeEEecCC
Q psy11075 3 LIVPSLSL-LLCHVTLSTAADYYFDFDD 29 (195)
Q Consensus 3 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 29 (195)
||||+-.+ -+...+...+++|++.++|
T Consensus 51 I~V~p~~~~~f~~~L~~~~I~y~Vlied 78 (78)
T 2gjf_A 51 ILIPSDMVEWFLEMLKAKGIPFTVYVEE 78 (78)
T ss_dssp EEECTTSHHHHHHHHHHHTCCEEEEEEC
T ss_pred EEECHHHHHHHHHHHHHCCCcEEEEeCC
Confidence 66776654 4445555667777777654
No 37
>3a4c_A DNA replication factor CDT1; alpha-beta structure, cell cycle, DNA- binding, nucleus, phosphoprotein, proto-oncogene, UBL conjugation; HET: DNA; 1.89A {Mus musculus} PDB: 2rqq_A*
Probab=30.48 E-value=1e+02 Score=21.04 Aligned_cols=31 Identities=13% Similarity=0.205 Sum_probs=29.0
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCCcEEEEEcc
Q psy11075 43 LQRYYNSTELDAFILKTVKSYPHLVRAETIG 73 (195)
Q Consensus 43 ~~~y~t~~ei~~~l~~l~~~~p~~v~~~~iG 73 (195)
|..-.+..||.+.++.|++--|+++++..+-
T Consensus 47 yr~~ls~~EmE~hl~lL~ellPdWls~~~vR 77 (106)
T 3a4c_A 47 CQTALSPGEMEKHLVLLAELLPDWLSLHRIR 77 (106)
T ss_dssp SCCSCCHHHHHHHHHHHHHHCTTTEEEEEET
T ss_pred hhccCCHHHHHHHHHHHHHhCcchheeeeee
Confidence 7888999999999999999999999998885
No 38
>1s12_A Hypothetical protein TM1457; crystal, structural genomics, PSI, berkeley structural genomics center, BSGC, protein structure initiative; 2.00A {Thermotoga maritima} SCOP: d.64.2.1
Probab=23.20 E-value=1.1e+02 Score=20.12 Aligned_cols=23 Identities=13% Similarity=0.258 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHCCCcEEEEE
Q psy11075 49 STELDAFILKTVKSYPHLVRAET 71 (195)
Q Consensus 49 ~~ei~~~l~~l~~~~p~~v~~~~ 71 (195)
.+.+.--|+.++++||+.+++.+
T Consensus 67 l~~~~~gL~~i~~~Y~~yI~i~e 89 (94)
T 1s12_A 67 LAAMVRSLKELEQKFPSQIRVEV 89 (94)
T ss_dssp HHHHHHHHHHHHHHSTTTEEEEE
T ss_pred HHHHHHHHHHHHHhCcCcEEEEE
Confidence 78889999999999999999843
No 39
>2idl_A Hypothetical protein; conserved hypothetical, MCSG, PSI2, MAD, structural genomics structure initiative; 1.70A {Streptococcus pneumoniae} SCOP: d.64.2.1
Probab=21.42 E-value=1.1e+02 Score=20.82 Aligned_cols=24 Identities=13% Similarity=0.152 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHCCCcEEEEEc
Q psy11075 49 STELDAFILKTVKSYPHLVRAETI 72 (195)
Q Consensus 49 ~~ei~~~l~~l~~~~p~~v~~~~i 72 (195)
.+.+.--|+.++++||+.+++...
T Consensus 91 l~~~~~gL~~i~~~Yp~yI~i~~~ 114 (117)
T 2idl_A 91 FESFFLGMANLSENYSEFVQTRVI 114 (117)
T ss_dssp HHHHHHHHHHHHHHTTTTEEEEEE
T ss_pred HHHHHHHHHHHHHhCcccEEEEEE
Confidence 566778889999999999988654
No 40
>2g0i_A Hypothetical protein SMU.848; 2-layer (alpha-beta)-sandwich, unknown function; 1.85A {Streptococcus mutans} SCOP: d.64.2.1 PDB: 2g0j_A
Probab=21.41 E-value=1.1e+02 Score=21.94 Aligned_cols=24 Identities=17% Similarity=0.139 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHCCCcEEEEEc
Q psy11075 49 STELDAFILKTVKSYPHLVRAETI 72 (195)
Q Consensus 49 ~~ei~~~l~~l~~~~p~~v~~~~i 72 (195)
.+.+.--|+.++++||+.+++...
T Consensus 120 Letm~lgL~~I~e~Yp~yIki~~~ 143 (145)
T 2g0i_A 120 FEAFLLGITNLAENSPEFVTAKIM 143 (145)
T ss_dssp HHHHHHHHHHHHHHCTTTEEEEEE
T ss_pred HHHHHHHHHHHHHhCcccEEEEEe
Confidence 566777888999999999998654
Done!