RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy11077
(97 letters)
>3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family,
hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB:
3cn7_A*
Length = 226
Score = 136 bits (343), Expect = 5e-42
Identities = 36/97 (37%), Positives = 61/97 (62%), Gaps = 1/97 (1%)
Query: 1 MPVTLNGGYPMPSWFDLISLDVNAKEDETGIKRAAQKIHSIIDKEVSAGIPSDRIVIGGF 60
VT+NGG+ MPSW+D+++ DE + +A ++ ++ID++ + GI ++RI++ GF
Sbjct: 64 QAVTVNGGWVMPSWYDILAFSPARAIDEDQLNASADQVIALIDEQRAKGIAAERIILAGF 123
Query: 61 SQGGALALYSAL-TYPKKLAGVVALSCWLPMHKSFPA 96
SQGGA+ L++A Y + L GV+ALS + P
Sbjct: 124 SQGGAVVLHTAFRRYAQPLGGVLALSTYAPTFDDLAL 160
>1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine
hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo
sapiens} SCOP: c.69.1.14
Length = 232
Score = 134 bits (338), Expect = 3e-41
Identities = 61/95 (64%), Positives = 78/95 (82%)
Query: 1 MPVTLNGGYPMPSWFDLISLDVNAKEDETGIKRAAQKIHSIIDKEVSAGIPSDRIVIGGF 60
PVTLN MPSWFD+I L +++EDE+GIK+AA+ I ++ID+EV GIPS+RI++GGF
Sbjct: 61 RPVTLNMNVAMPSWFDIIGLSPDSQEDESGIKQAAENIKALIDQEVKNGIPSNRIILGGF 120
Query: 61 SQGGALALYSALTYPKKLAGVVALSCWLPMHKSFP 95
SQGGAL+LY+ALT +KLAGV ALSCWLP+ SFP
Sbjct: 121 SQGGALSLYTALTTQQKLAGVTALSCWLPLRASFP 155
>1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP:
c.69.1.14 PDB: 1aur_A*
Length = 218
Score = 129 bits (326), Expect = 1e-39
Identities = 33/98 (33%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 1 MPVTLNGGYPMPSWFDLISLDVNAKEDETGIKRAAQKIHSIIDKEVSAGIPSDRIVIGGF 60
PVT+NGGY MPSW+D+ ++ ++ +A+ + +I+ + GI + RI + GF
Sbjct: 54 RPVTINGGYEMPSWYDIKAMSPARSISLEELEVSAKMVTDLIEAQKRTGIDASRIFLAGF 113
Query: 61 SQGGALALYSALT-YPKKLAGVVALSCWLPMHKSFPAI 97
SQGGA+ ++A + L GV+ALS + P +
Sbjct: 114 SQGGAVVFHTAFINWQGPLGGVIALSTYAPTFGDELEL 151
>3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold,
hydrolase; 1.72A {Homo sapiens}
Length = 239
Score = 129 bits (327), Expect = 2e-39
Identities = 32/96 (33%), Positives = 47/96 (48%)
Query: 1 MPVTLNGGYPMPSWFDLISLDVNAKEDETGIKRAAQKIHSIIDKEVSAGIPSDRIVIGGF 60
T G WFD + + E I Q + +ID+EV +GI +RI+IGGF
Sbjct: 66 RSYTPMKGGISNVWFDRFKITNDCPEHLESIDVMCQVLTDLIDEEVKSGIKKNRILIGGF 125
Query: 61 SQGGALALYSALTYPKKLAGVVALSCWLPMHKSFPA 96
S GG +A++ A + +AGV ALS +L +
Sbjct: 126 SMGGCMAMHLAYRNHQDVAGVFALSSFLNKASAVYQ 161
>3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase,
copper homeostasis, malic acid; 1.88A {Lactococcus
lactis subsp}
Length = 209
Score = 80.2 bits (198), Expect = 2e-20
Identities = 14/91 (15%), Positives = 28/91 (30%), Gaps = 6/91 (6%)
Query: 2 PVTLNGGYPMPSWFDLISLDVNAKE--DETGIKRAAQKIHSIIDKEVSA-GIPSDRIVIG 58
+ G + +F L L KE D + + + + +++
Sbjct: 51 RINEQG---VNRYFKLRGLGGFTKENFDLESLDEETDWLTDEVSLLAEKHDLDVHKMIAI 107
Query: 59 GFSQGGALALYSALTYPKKLAGVVALSCWLP 89
G+S G +AL L ++A
Sbjct: 108 GYSNGANVALNMFLRGKINFDKIIAFHGMQL 138
>2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088,
agrobacterium tumefaciens STR. C58 structural genomics,
PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP:
c.69.1.14
Length = 251
Score = 77.3 bits (190), Expect = 5e-19
Identities = 16/90 (17%), Positives = 29/90 (32%), Gaps = 4/90 (4%)
Query: 2 PVTLNGGYPMPSWFDLISLDVNAKEDETGIKRAAQKIHSIIDKEVSAGIPSDRIVIGGFS 61
PV + +F V D ++RA K+ I + ++ GFS
Sbjct: 94 PVGDVSEHGAARFFRRTGEGV---YDMVDLERATGKMADFIK-ANREHYQAGPVIGLGFS 149
Query: 62 QGGALALYSALTYPKKLAGVVALSCWLPMH 91
G + + P+ V + +P
Sbjct: 150 NGANILANVLIEQPELFDAAVLMHPLIPFE 179
>3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural
genomics, joint CE structural genomics, JCSG, protein
structure initiative; 1.75A {Mesorhizobium loti} SCOP:
c.69.1.14
Length = 223
Score = 75.7 bits (186), Expect = 1e-18
Identities = 14/89 (15%), Positives = 26/89 (29%), Gaps = 7/89 (7%)
Query: 2 PVTLNGGYPMPSWFDLISLDVNAKEDETGIKRAAQKIHSIIDKEVSA-GIPSDRIVIGGF 60
+ G+ WF+ I ++ I + ++ G+ D G+
Sbjct: 65 RIPQEDGF---RWFERIDPTRF---EQKSILAETAAFAAFTNEAAKRHGLNLDHATFLGY 118
Query: 61 SQGGALALYSALTYPKKLAGVVALSCWLP 89
S G L L +P + L
Sbjct: 119 SNGANLVSSLMLLHPGIVRLAALLRPMPV 147
>2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct
initiative, midwest center for structural genomics,
MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP:
c.69.1.14
Length = 226
Score = 73.3 bits (180), Expect = 1e-17
Identities = 21/96 (21%), Positives = 36/96 (37%), Gaps = 7/96 (7%)
Query: 2 PVTLNGGYPMPSWFDLISLDVNAKEDETGIKRAAQKIHSIIDKEVSA-GIPSDRIVIGGF 60
V NG MP +F ++ + DE + ++++ +D+ + IV G+
Sbjct: 73 NVLENG---MPRFFRRLAEGI---FDEEDLIFRTKELNEFLDEAAKEYKFDRNNIVAIGY 126
Query: 61 SQGGALALYSALTYPKKLAGVVALSCWLPMHKSFPA 96
S G +A Y L G V +P A
Sbjct: 127 SNGANIAASLLFHYENALKGAVLHHPMVPRRGMQLA 162
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase,
cinnamoyl/Fe esterase, hydroxycinammates, extracellular;
HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A*
3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Length = 270
Score = 46.7 bits (111), Expect = 1e-07
Identities = 14/67 (20%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
Query: 28 ETGIKRAAQKIHSIIDKEVSAGIPSDRIVIGGFSQGGALALYSALTYPKKLAGVVALSCW 87
+ + ++I++ V I + G +QGG +A A YP + VV L+
Sbjct: 95 NMTVLNEIEDANAILN-YVKTDPHVRNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPA 153
Query: 88 LPMHKSF 94
+
Sbjct: 154 ATLKGDA 160
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Length = 251
Score = 44.2 bits (105), Expect = 7e-07
Identities = 11/58 (18%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Query: 28 ETGIKRAAQKIHSIIDKEVSAGIPSDRIVIGGFSQGGALALYSALTYPKKLAGVVALS 85
+ + + I +++D I + G SQGG + +A + ++ LS
Sbjct: 76 DHTLFKWLTNILAVVD-YAKKLDFVTDIYMAGHSQGGLSVMLAAAMERDIIKALIPLS 132
>2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone
biosynthesis, lyase; 1.94A {Staphylococcus aureus}
Length = 269
Score = 40.0 bits (94), Expect = 2e-05
Identities = 15/79 (18%), Positives = 34/79 (43%), Gaps = 12/79 (15%)
Query: 15 FDLISLDV-------NAKEDETGIKRAAQKIHSIIDKEVSAGIPSDRIVIGGFSQGGALA 67
+ +I++D+ ++ ++ + I+DK I + G+S GG +A
Sbjct: 43 YHVITIDLPGHGEDQSSMDETWNFDYITTLLDRILDK---YKD--KSITLFGYSMGGRVA 97
Query: 68 LYSALTYPKKLAGVVALSC 86
LY A+ ++ ++ S
Sbjct: 98 LYYAINGHIPISNLILEST 116
>3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga
maritima} PDB: 3doi_A
Length = 380
Score = 40.1 bits (93), Expect = 2e-05
Identities = 13/59 (22%), Positives = 23/59 (38%), Gaps = 1/59 (1%)
Query: 34 AAQKIHSIIDKEVSA-GIPSDRIVIGGFSQGGALALYSALTYPKKLAGVVALSCWLPMH 91
+ II K + I +RI I G S GG + + +P+ A + + +
Sbjct: 243 PLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFPELFAAAIPICGGGDVS 301
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad,
rotation; 1.60A {Lactobacillus rhamnosus} PDB: 3dlt_A
3dyi_A 3dyv_A 3e1g_A
Length = 251
Score = 39.9 bits (93), Expect = 2e-05
Identities = 13/44 (29%), Positives = 18/44 (40%)
Query: 53 DRIVIGGFSQGGALALYSALTYPKKLAGVVALSCWLPMHKSFPA 96
++ + G S GG A+ + T P AG V S LP
Sbjct: 93 AKVFVFGLSLGGIFAMKALETLPGITAGGVFSSPILPGKHHLVP 136
>3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron
aquisition, structural genomics, PSI-2, protein
structure initiative; HET: CIT; 1.80A {Shigella flexneri
2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A*
3c8h_A 3mga_A*
Length = 403
Score = 38.8 bits (90), Expect = 7e-05
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 53 DRIVIGGFSQGGALALYSALTYPKKLAGVVALS 85
DR V+ G S GG ALY+ L +P++ V++ S
Sbjct: 276 DRTVVAGQSFGGLSALYAGLHWPERFGCVLSQS 308
>3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration
switch protein, hydrolase ACTI lyase; 2.20A {Vibrio
vulnificus} PDB: 3our_A
Length = 415
Score = 38.8 bits (90), Expect = 8e-05
Identities = 8/38 (21%), Positives = 15/38 (39%)
Query: 48 AGIPSDRIVIGGFSQGGALALYSALTYPKKLAGVVALS 85
+ R+ + GF GG + + +K+ V L
Sbjct: 259 PYVDHHRVGLIGFRFGGNAMVRLSFLEQEKIKACVILG 296
>3e0x_A Lipase-esterase related protein; APC60309, clostridium
acetobutylicum ATCC 824, structural genomics, PSI-2;
HET: MSE; 1.45A {Clostridium acetobutylicum}
Length = 245
Score = 37.7 bits (88), Expect = 1e-04
Identities = 14/61 (22%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Query: 25 KEDETGIKRAAQKIHSIIDKEVSAGIPSDRIVIGGFSQGGALALYSALTYPKKLAGVVAL 84
+ + + + + I I + G+S GGA+ L AL + VV+L
Sbjct: 57 GQCPSTVYGYIDNVANFIT-NSEVTKHQKNITLIGYSMGGAIVLGVALKKLPNVRKVVSL 115
Query: 85 S 85
S
Sbjct: 116 S 116
>3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7;
2.10A {Thermoanaerobacterium SP}
Length = 346
Score = 37.5 bits (87), Expect = 2e-04
Identities = 16/87 (18%), Positives = 29/87 (33%), Gaps = 3/87 (3%)
Query: 7 GGYPMPSWFDLISLDVNAKEDETGIKRAAQKIHSIIDKEVSAG-IPSDRIVIGGFSQGGA 65
GG + I ++ D + + ++ + DR+ + G SQGG
Sbjct: 153 GGVTGNTLNGHIIRGLDDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGG 212
Query: 66 LALYSALTYP--KKLAGVVALSCWLPM 90
L+L A P +K+
Sbjct: 213 LSLACAALEPRVRKVVSEYPFLSDYKR 239
>3nwo_A PIP, proline iminopeptidase; structural genomics, seattle
structural genomics center for infectious disease,
ssgcid, mycobac smegmatis; 1.90A {Mycobacterium
smegmatis}
Length = 330
Score = 37.4 bits (87), Expect = 2e-04
Identities = 9/44 (20%), Positives = 16/44 (36%), Gaps = 1/44 (2%)
Query: 53 DRIVIGGFSQGGALALYSALTYPKKLAGVVALSCWLPMHKSFPA 96
+R + G S GG L A+ P L + + + +
Sbjct: 126 ERYHVLGQSWGGMLGAEIAVRQPSGLVSLA-ICNSPASMRLWSE 168
>3ksr_A Putative serine hydrolase; catalytic triad, structural genomics,
JOIN for structural genomics, JCSG; 2.69A {Xanthomonas
campestris PV}
Length = 290
Score = 37.1 bits (86), Expect = 2e-04
Identities = 7/35 (20%), Positives = 14/35 (40%)
Query: 49 GIPSDRIVIGGFSQGGALALYSALTYPKKLAGVVA 83
+ + I + G S GG L+ P + + +
Sbjct: 97 YVDAHSIAVVGLSYGGYLSALLTRERPVEWLALRS 131
>1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl
esterase, ferulic acid esterase, FAE_XYNZ, XYNZ,
structural genomics; 1.75A {Clostridium thermocellum}
SCOP: c.69.1.2 PDB: 1jt2_A*
Length = 268
Score = 37.1 bits (86), Expect = 3e-04
Identities = 14/49 (28%), Positives = 18/49 (36%), Gaps = 4/49 (8%)
Query: 51 PSDRIVIGGFSQGGALALYSALTYPKKLAGVVALSC---WLPMHKSFPA 96
R I G S GG + LT K A + +S P + FP
Sbjct: 144 REHR-AIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAPNTYPNERLFPD 191
>3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase
fold, carboxylesterase, Ser- hydrolase; 2.00A
{Streptococcus mutans}
Length = 292
Score = 36.5 bits (84), Expect = 5e-04
Identities = 10/55 (18%), Positives = 16/55 (29%), Gaps = 5/55 (9%)
Query: 31 IKRAAQKIHSIIDKEVSAGIPSDRIVIGGFSQGGALALYSALTYPKKLAGVVALS 85
++ I I + ++ S GG AL K G + L
Sbjct: 93 LRDWVNAILMIFEH---FKF--QSYLLCVHSIGGFAALQIMNQSSKACLGFIGLE 142
>1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive
mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP:
c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A*
Length = 297
Score = 35.8 bits (82), Expect = 7e-04
Identities = 17/87 (19%), Positives = 28/87 (32%), Gaps = 10/87 (11%)
Query: 1 MPVTLNGGYPMPSWFDLISLDVNAKEDETGIKRAAQKIHSIIDKEVSAGIPSDR--IVIG 58
P G +++ +V I K + + GI + R G
Sbjct: 112 TPTFNGGNCTAQNFYQEFRQNV--------IPFVESKYSTYAESTTPQGIAASRMHRGFG 163
Query: 59 GFSQGGALALYSALTYPKKLAGVVALS 85
GF+ GG Y + +A + LS
Sbjct: 164 GFAMGGLTTWYVMVNCLDYVAYFMPLS 190
>3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2,
structural genomics, protein structure initiative,
midwest for structural genomics; 2.00A {Oenococcus oeni}
Length = 272
Score = 35.1 bits (81), Expect = 0.001
Identities = 14/57 (24%), Positives = 19/57 (33%), Gaps = 5/57 (8%)
Query: 26 EDETGIKRAAQKIHSIIDKEVSAGIPSDRIVIGGFSQGGALALYSALTYPKKLAGVV 82
T I +I + G R ++ G S GG LA A + GV
Sbjct: 67 SPSTSDNVLETLIEAIEEII---GA--RRFILYGHSYGGYLAQAIAFHLKDQTLGVF 118
>3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase
fold, hydrolase; 1.20A {Bacillus SP}
Length = 270
Score = 35.2 bits (81), Expect = 0.001
Identities = 11/30 (36%), Positives = 13/30 (43%)
Query: 53 DRIVIGGFSQGGALALYSALTYPKKLAGVV 82
I + G S GG L LY A +P V
Sbjct: 109 QTIFVTGLSMGGTLTLYLAEHHPDICGIVP 138
>2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase;
alpha/beta hydrolase, META-cleavage pathway; 2.1A
{Arthrobacter nicotinovorans} SCOP: c.69.1.41
Length = 386
Score = 35.0 bits (80), Expect = 0.002
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 48 AGIPSDRIVIGGFSQGGALALYSALTYPKKLAGVVALS 85
I +D I + G S GG AL SA P +LA ++
Sbjct: 218 EAIRNDAIGVLGRSLGGNYALKSAACEP-RLAACISWG 254
>2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo
sapiens} PDB: 2oci_A* 2ock_A 2ocl_A
Length = 254
Score = 34.6 bits (80), Expect = 0.002
Identities = 10/35 (28%), Positives = 17/35 (48%)
Query: 53 DRIVIGGFSQGGALALYSALTYPKKLAGVVALSCW 87
++ + G+S GG AL +A YP + +V
Sbjct: 94 KKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGAN 128
>2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase,
putative lipase; HET: CME CSO; 1.90A {Saccharomyces
cerevisiae} PDB: 2y6v_A*
Length = 398
Score = 34.3 bits (78), Expect = 0.003
Identities = 9/47 (19%), Positives = 16/47 (34%)
Query: 38 IHSIIDKEVSAGIPSDRIVIGGFSQGGALALYSALTYPKKLAGVVAL 84
+ + S V+ G S GG AL + P ++ +
Sbjct: 122 LKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNLFHLLILI 168
>3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center
for structural genomics, JCSG, protein structure INI
PSI-2; 2.12A {Shewanella oneidensis}
Length = 331
Score = 34.2 bits (78), Expect = 0.003
Identities = 9/34 (26%), Positives = 16/34 (47%)
Query: 52 SDRIVIGGFSQGGALALYSALTYPKKLAGVVALS 85
+ V+ G S GG +A+ + T + +AL
Sbjct: 136 NGINVLVGHSFGGLVAMEALRTDRPLFSAYLALD 169
>3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure
initiative, PSI-2, structural midwest center for
structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus
anthracis}
Length = 278
Score = 33.9 bits (78), Expect = 0.003
Identities = 11/59 (18%), Positives = 21/59 (35%), Gaps = 5/59 (8%)
Query: 31 IKRAAQKIHSIIDKEVSAGIPSDRIVIGGFSQGGALALYSALTYPKKLAGVVALSCWLP 89
+ + + +I + I ++ G S GG LAL A + L ++
Sbjct: 74 MTETIKDLEAIREA---LYI--NKWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAAS 127
>1iup_A META-cleavage product hydrolase; aromatic compounds, cumene,
isopropylbenzene, META-cleavage compound hydrolase;
1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB:
1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A
2d0d_A
Length = 282
Score = 33.8 bits (78), Expect = 0.003
Identities = 10/35 (28%), Positives = 20/35 (57%)
Query: 53 DRIVIGGFSQGGALALYSALTYPKKLAGVVALSCW 87
++ I G + GG LA+ +AL Y +++ +V +
Sbjct: 95 EKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAA 129
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural
genomics, joint center structural genomics, JCSG; HET:
MSE; 1.50A {Pseudomonas aeruginosa}
Length = 315
Score = 34.0 bits (78), Expect = 0.003
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 53 DRIVIGGFSQGGALALYSALTYPKKLAGVVALS 85
R + G S GG LA AL YP+++ +V ++
Sbjct: 114 ARASVIGHSMGGMLATRYALLYPRQVERLVLVN 146
>1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta
hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP:
c.69.1.29 PDB: 1r1d_A* 4diu_A
Length = 247
Score = 34.0 bits (78), Expect = 0.003
Identities = 8/39 (20%), Positives = 16/39 (41%)
Query: 51 PSDRIVIGGFSQGGALALYSALTYPKKLAGVVALSCWLP 89
++I + G S GG +L T P + + ++
Sbjct: 84 GYEKIAVAGLSLGGVFSLKLGYTVPIEGIVTMCAPMYIK 122
>1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI,
protei structure initiative; HET: MSE 3OH; 1.70A
{Escherichia coli} SCOP: c.69.1.26
Length = 258
Score = 33.8 bits (78), Expect = 0.004
Identities = 11/30 (36%), Positives = 20/30 (66%)
Query: 53 DRIVIGGFSQGGALALYSALTYPKKLAGVV 82
D+ + G+S GG +A ALT+P+++ +V
Sbjct: 74 DKAIWLGWSLGGLVASQIALTHPERVRALV 103
>2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism;
1.90A {Burkholderia xenovorans}
Length = 266
Score = 33.4 bits (77), Expect = 0.006
Identities = 7/35 (20%), Positives = 12/35 (34%)
Query: 53 DRIVIGGFSQGGALALYSALTYPKKLAGVVALSCW 87
R G S GG + A + ++ V +
Sbjct: 92 ARANFCGLSMGGLTGVALAARHADRIERVALCNTA 126
>3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure
initiative, MI center for structural genomics, MCSG;
HET: MES; 2.25A {Pseudomonas aeruginosa}
Length = 266
Score = 33.0 bits (76), Expect = 0.006
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 53 DRIVIGGFSQGGALALYSALTYPKKLAGVVALSCW 87
R G S GG + + AL P+++ +V +
Sbjct: 93 RRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTS 127
>3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold
seven-stranded beta-sandwich, structural genomics,
structural genomics consortium, SGC; 2.40A {Homo
sapiens}
Length = 422
Score = 33.3 bits (75), Expect = 0.007
Identities = 8/46 (17%), Positives = 14/46 (30%)
Query: 49 GIPSDRIVIGGFSQGGALALYSALTYPKKLAGVVALSCWLPMHKSF 94
+ I + G S G + L A A V + + +
Sbjct: 221 QVKGPGIGLLGISLGADICLSMASFLKNVSATVSINGSGISGNTAI 266
>3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase,
hydrolase; 1.90A {Mycobacterium tuberculosis} PDB:
3e3a_A 3hys_A 3hzo_A
Length = 293
Score = 33.1 bits (76), Expect = 0.007
Identities = 6/35 (17%), Positives = 14/35 (40%)
Query: 53 DRIVIGGFSQGGALALYSALTYPKKLAGVVALSCW 87
+ G S G +A + P+ ++ V ++
Sbjct: 110 APARVVGVSMGAFIAQELMVVAPELVSSAVLMATR 144
>1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1
interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23
Length = 210
Score = 32.6 bits (74), Expect = 0.008
Identities = 7/33 (21%), Positives = 12/33 (36%)
Query: 53 DRIVIGGFSQGGALALYSALTYPKKLAGVVALS 85
V+ S G +L +L G V ++
Sbjct: 103 GPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVA 135
>1j1i_A META cleavage compound hydrolase; carbazole degradation, META
cleavage product hydrolase, histidine tagged protein,
alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP:
c.69.1.10
Length = 296
Score = 32.7 bits (75), Expect = 0.008
Identities = 12/59 (20%), Positives = 23/59 (38%), Gaps = 4/59 (6%)
Query: 28 ETGIKRAAQKIHSIIDKEVSAGIPSDRIVIGGFSQGGALALYSALTYPKKLAGVVALSC 86
E R + +H I ++ I G S GGA L ++ + + + +V +
Sbjct: 85 EYTQDRRIRHLHDFIKA---MNF-DGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGS 139
>1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta
hydrolase fold; 2.10A {Escherichia coli}
Length = 289
Score = 32.7 bits (75), Expect = 0.009
Identities = 8/30 (26%), Positives = 17/30 (56%)
Query: 53 DRIVIGGFSQGGALALYSALTYPKKLAGVV 82
+I + G S GG ++ L +P+++ +V
Sbjct: 107 AKIHLLGNSMGGHSSVAFTLKWPERVGKLV 136
>2yys_A Proline iminopeptidase-related protein; TTHA1809, structural
genomics, unknown function; 2.20A {Thermus thermophilus}
Length = 286
Score = 32.8 bits (75), Expect = 0.009
Identities = 5/30 (16%), Positives = 12/30 (40%)
Query: 53 DRIVIGGFSQGGALALYSALTYPKKLAGVV 82
+R + G +AL +P+ ++
Sbjct: 95 ERFGLLAHGFGAVVALEVLRRFPQAEGAIL 124
>2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond
hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia
xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A*
3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A
Length = 286
Score = 32.7 bits (75), Expect = 0.009
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 5/56 (8%)
Query: 27 DETGIKRAAQKIHSIIDKEVSAGIPSDRIVIGGFSQGGALALYSALTYPKKLAGVV 82
DE A+ + ++D I DR + G + GGA AL AL YP ++ ++
Sbjct: 83 DEQRGLVNARAVKGLMDA---LDI--DRAHLVGNAMGGATALNFALEYPDRIGKLI 133
>1r3d_A Conserved hypothetical protein VC1974; structural genomics,
hydrolase, NYSGXRC, NEW YORK SGX research center for
structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP:
c.69.1.35
Length = 264
Score = 32.7 bits (75), Expect = 0.010
Identities = 10/75 (13%), Positives = 23/75 (30%), Gaps = 8/75 (10%)
Query: 15 FDLISLDV-----NAKEDETGIKRAAQKIHSIIDKEVSAGIPSDRIVIGGFSQGGALALY 69
++LD+ N + A + I + +++ G+S GG L ++
Sbjct: 44 CAALTLDLPGHGTNPERHCDNFAEAVEMIEQTVQAH---VTSEVPVILVGYSLGGRLIMH 100
Query: 70 SALTYPKKLAGVVAL 84
+
Sbjct: 101 GLAQGAFSRLNLRGA 115
>2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway,
coenzyme A, structure-functi studies, alpha-beta
hydrolase fold; 1.65A {Haemophilus influenzae} SCOP:
c.69.1.40
Length = 377
Score = 32.7 bits (75), Expect = 0.011
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 49 GIPSDRIVIGGFSQGGALALYSALTYPKKLAGVVALSC 86
GI + +IGG S GG A A+ YP + +V L
Sbjct: 151 GISHLKAIIGG-SFGGMQANQWAIDYPDFMDNIVNLCS 187
>3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix
bundle, structural genomics protein structure
initiative; HET: PGE; 2.12A {Streptococcus mutans}
Length = 405
Score = 32.4 bits (73), Expect = 0.012
Identities = 10/49 (20%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Query: 48 AGIPSDRIVIGGFSQGGALALYSALTYPKKLAGVVALSCWLPMHKSFPA 96
P+++I I GFS GG + ++ +A + + + F
Sbjct: 223 YQAPTEKIAIAGFSGGGYFTAQAVEKDK-RIKAWIASTPIYDVAEVFRI 270
>1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha
sandwich, PSI, protein structure initiative; 1.50A
{Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A
3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B*
Length = 318
Score = 32.4 bits (74), Expect = 0.013
Identities = 11/44 (25%), Positives = 15/44 (34%), Gaps = 2/44 (4%)
Query: 49 GIPSDRIVIGGFSQGGALALYSALTYPKKLAGVVALS--CWLPM 90
+ RI + G SQGG L + +A A V
Sbjct: 169 EVDETRIGVTGGSQGGGLTIAAAALSDIPKAAVADYPYLSNFER 212
>3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured
bacterium} PDB: 3dnm_A
Length = 322
Score = 32.3 bits (74), Expect = 0.013
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 6/54 (11%)
Query: 49 GIPSDRIVIGGFSQGGALALYSALT-----YPKKLAGVVALSCWLPMHKSFPAI 97
+DRI+I G S GG L S L P AG+V LS ++ + S +
Sbjct: 145 AGSADRIIIAGDSAGGGLTTASMLKAKEDGLP-MPAGLVMLSPFVDLTLSRWSN 197
>1g66_A Acetyl xylan esterase II; serine hydrolase, acetyl xylopyranose,
hydrolase; 0.90A {Penicillium purpurogenum} SCOP:
c.69.1.30 PDB: 1bs9_A 2axe_A*
Length = 207
Score = 32.0 bits (72), Expect = 0.014
Identities = 15/59 (25%), Positives = 23/59 (38%), Gaps = 5/59 (8%)
Query: 9 YPMPSWFDLISLDVNAKEDETGIKRAAQKIHSIIDKEVSAGIPSDRIVIGGFSQGGALA 67
YP + GI A ++S + PS +IV+ G+SQGG +
Sbjct: 43 YPACGGQSSCGGASYSSSVAQGIAAVASAVNSFNSQ-----CPSTKIVLVGYSQGGEIM 96
>2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B-
hydrolase fold, acyltransferase, acetyl coenzyme A,
antibiotic biosynthesis; HET: COA; 2.2A {Acremonium
chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A*
Length = 444
Score = 32.4 bits (74), Expect = 0.014
Identities = 10/38 (26%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 49 GIPSDRIVIGGFSQGGALALYSALTYPKKLAGVVALSC 86
G+ V+G S GG L A P+ + +V ++
Sbjct: 197 GVRQIAAVVGA-SMGGMHTLEWAFFGPEYVRKIVPIAT 233
>2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa
transferase; 2.20A {Leptospira interrogans} SCOP:
c.69.1.40
Length = 366
Score = 32.2 bits (74), Expect = 0.015
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 49 GIPSDRIVIGGFSQGGALALYSALTYPKKLAGVVALSC 86
GI V GG S GG AL ++ YP L+ + ++
Sbjct: 142 GIEKLFCVAGG-SMGGMQALEWSIAYPNSLSNCIVMAS 178
>2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST
initiative, midwest center for structural genomics,
MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579}
Length = 275
Score = 32.2 bits (73), Expect = 0.015
Identities = 10/53 (18%), Positives = 17/53 (32%), Gaps = 2/53 (3%)
Query: 35 AQKIHSIIDKEVSAGIPSDRIVIGGFSQGGALALYSALTYPKKLAGVVALSCW 87
+++ I+K I + + G GG AL+ T S
Sbjct: 136 EEELKPQIEKNFE--IDKGKQTLFGHXLGGLFALHILFTNLNAFQNYFISSPS 186
>2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center
for structural genomics, JCSG, protein structure INI
PSI-2; HET: MSE; 1.92A {Anabaena variabilis}
Length = 223
Score = 32.2 bits (73), Expect = 0.015
Identities = 10/37 (27%), Positives = 16/37 (43%)
Query: 48 AGIPSDRIVIGGFSQGGALALYSALTYPKKLAGVVAL 84
++ G S GG AL +A P+ + VV+
Sbjct: 109 PDTQHLKVGYFGASTGGGAALVAAAERPETVQAVVSR 145
>3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for
structu genomics, MCSG, alpha-beta hydrolase fold,
hydrolase; 2.00A {Oleispira antarctica}
Length = 282
Score = 31.8 bits (73), Expect = 0.016
Identities = 4/33 (12%), Positives = 13/33 (39%)
Query: 53 DRIVIGGFSQGGALALYSALTYPKKLAGVVALS 85
+ I G S +A ++ +++ + +
Sbjct: 98 VNVSIIGHSVSSIIAGIASTHVGDRISDITMIC 130
>2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR
family, developmental protei differentiation,
neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus
musculus} PDB: 2xmq_A 2xmr_A 2xms_A
Length = 286
Score = 32.0 bits (72), Expect = 0.017
Identities = 8/34 (23%), Positives = 15/34 (44%)
Query: 53 DRIVIGGFSQGGALALYSALTYPKKLAGVVALSC 86
I+ G G + AL +P + G+V ++
Sbjct: 111 STIIGVGVGAGAYILSRYALNHPDTVEGLVLINI 144
>3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal
hydrolase; HET: PE4; 1.76A {Thermobifida alba}
Length = 306
Score = 32.0 bits (72), Expect = 0.018
Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Query: 31 IKRAAQKIHSIIDKEVSAGIPSDRIVIGGFSQGGALALYSALTYPKKLAGVVALSCWLPM 90
+ A + + V I + R+ + G S GG L A P L + L+ W +
Sbjct: 145 LNAALDYMLTDASSAVRNRIDASRLAVMGHSMGGGGTLRLASQRP-DLKAAIPLTPW-HL 202
Query: 91 HKSFPAI 97
+KS+ I
Sbjct: 203 NKSWRDI 209
>3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog,
hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas
fluorescens} PDB: 1va4_A 3hi4_A 3hea_A
Length = 271
Score = 31.9 bits (73), Expect = 0.020
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 53 DRIVIGGFSQGGAL-ALYSALTYPKKLAGVVALSCWLP 89
+ + GFS GG A Y A ++AG+V L P
Sbjct: 86 KEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTP 123
>2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural
genomics, joint center for structural genomics, JCSG;
HET: MSE PGE; 1.96A {Bacillus subtilis}
Length = 306
Score = 31.6 bits (72), Expect = 0.023
Identities = 8/33 (24%), Positives = 15/33 (45%)
Query: 53 DRIVIGGFSQGGALALYSALTYPKKLAGVVALS 85
++ + G S GG + L P+++ LS
Sbjct: 134 EKSHMIGLSLGGLHTMNFLLRMPERVKSAAILS 166
>1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged
active site, prolyl peptidase; 1.80A {Thermoplasma
acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A
1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A*
1xqx_A* 1xqy_A 1xqv_A
Length = 293
Score = 31.4 bits (72), Expect = 0.024
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Query: 53 DRIVIGGFSQGGALAL-YSALTYPKKLAGVV 82
+++ + G S GGALAL Y A+ Y L G++
Sbjct: 97 EKVFLMGSSYGGALALAY-AVKYQDHLKGLI 126
>1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune
system; 1.71A {Mycobacterium tuberculosis} SCOP:
c.69.1.3
Length = 280
Score = 31.4 bits (71), Expect = 0.024
Identities = 9/37 (24%), Positives = 16/37 (43%)
Query: 49 GIPSDRIVIGGFSQGGALALYSALTYPKKLAGVVALS 85
G+ G +QGG A+ A +P + ++S
Sbjct: 108 GLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMS 144
>2rau_A Putative esterase; NP_343859.1, putative lipase, structural
genomics, joint CEN structural genomics, JCSG; HET: PG4
UNL; 1.85A {Sulfolobus solfataricus P2}
Length = 354
Score = 31.5 bits (70), Expect = 0.026
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 38 IHSIIDKEVSAGIPSDRIVIGGFSQGGALAL-YSALTYPKKLAGVVALS 85
I ++ + +RI + G S GG AL YS+L + + G++ L
Sbjct: 130 IKEVVSF-IKRDSGQERIYLAGESFGGIAALNYSSLYWKNDIKGLILLD 177
>3ff1_A Glucose-6-phosphate isomerase; alpha beta, rossmann fold,
gluconeogenesis, glycolysis, structural genomics; HET:
G6Q; 1.65A {Staphylococcus aureus subsp} PDB: 3ifs_A*
Length = 446
Score = 31.6 bits (72), Expect = 0.028
Identities = 19/74 (25%), Positives = 28/74 (37%), Gaps = 9/74 (12%)
Query: 5 LNGGYPMPSWFDLISLDVNAKEDETG-IKRAAQKIHSIIDKEVSAGIPSDRIVIGGFSQG 63
G + + L V+ ++E I A+++I D V G IGG S
Sbjct: 38 HEGTGAGSDFLGWVDLPVDYDKEEFSRIVEASKRIKENSDVLVVIG-------IGG-SYL 89
Query: 64 GALALYSALTYPKK 77
GA A LT +
Sbjct: 90 GARAAIEMLTSSFR 103
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold,
2-arachidonyl-glycerol, M associated, hydrolase,
hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A
{Homo sapiens} PDB: 3jw8_A 3jwe_A*
Length = 303
Score = 31.1 bits (71), Expect = 0.031
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 55 IVIGGFSQGGALALYSALTYPKKLAGVVALSCWLPMHKSFP 95
+ + G S GGA+A+ +A P AG+V +S + +
Sbjct: 116 VFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESA 156
>3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural
genomics, PSI-biology, NEW YORK structural genomi
research consortium; 2.10A {Escherichia coli SE11}
Length = 268
Score = 31.1 bits (71), Expect = 0.031
Identities = 7/35 (20%), Positives = 18/35 (51%)
Query: 53 DRIVIGGFSQGGALALYSALTYPKKLAGVVALSCW 87
+ + G + G + + AL YP + +++++ W
Sbjct: 82 EHYAVVGHALGALVGMQLALDYPASVTVLISVNGW 116
>3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase;
2.20A {Unidentified}
Length = 309
Score = 31.2 bits (71), Expect = 0.034
Identities = 6/27 (22%), Positives = 12/27 (44%)
Query: 63 GGALALYSALTYPKKLAGVVALSCWLP 89
G + + A P ++A V + +P
Sbjct: 106 GSVIGMRHARLNPDRVAAVAFMEALVP 132
>2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold;
1.90A {Plesiocystis pacifica}
Length = 297
Score = 30.9 bits (70), Expect = 0.035
Identities = 7/37 (18%), Positives = 17/37 (45%)
Query: 53 DRIVIGGFSQGGALALYSALTYPKKLAGVVALSCWLP 89
+R+ + GG L L + P+ + ++ ++ L
Sbjct: 115 ERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTALA 151
>1qoz_A AXE, acetyl xylan esterase; hydrolase, xylan degradation; HET:
NAG; 1.90A {Trichoderma reesei} SCOP: c.69.1.30
Length = 207
Score = 30.8 bits (69), Expect = 0.037
Identities = 13/59 (22%), Positives = 18/59 (30%), Gaps = 5/59 (8%)
Query: 9 YPMPSWFDLISLDVNAKEDETGIKRAAQKIHSIIDKEVSAGIPSDRIVIGGFSQGGALA 67
YP A G AA I P ++V+ G+SQG +
Sbjct: 43 YPACGGQASCGGISYANSVVNGTNAAAAAI-----NNFHNSCPDTQLVLVGYSQGAQIF 96
>1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase,
polyketide, tailoring enzyme, structural proteomics in
europe, spine; HET: AKT 1PE; 1.45A {Streptomyces
purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A*
Length = 298
Score = 31.0 bits (70), Expect = 0.044
Identities = 9/35 (25%), Positives = 15/35 (42%)
Query: 53 DRIVIGGFSQGGALALYSALTYPKKLAGVVALSCW 87
DR + G S G + AL + +L+ + L
Sbjct: 94 DRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGG 128
>3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine
esterase; 2.20A {Homo sapiens}
Length = 342
Score = 30.8 bits (70), Expect = 0.046
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 55 IVIGGFSQGGALALYSALTYPKKLAGVVALSCWLPMHKSFPA 96
+ + G S GGA+A+ +A P AG+V +S P+ + P
Sbjct: 134 VFLLGHSMGGAIAILTAAERPGHFAGMVLIS---PLVLANPE 172
>3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta
hydrolase, PLP degradation, E-2-
(acetamidomethylene)succinate; 2.26A {Mesorhizobium
loti}
Length = 314
Score = 30.5 bits (69), Expect = 0.051
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 53 DRIVIGGFSQGGALALYSALTYPKKLAGVVALS 85
++ G S G ++ +A YP + VVA+
Sbjct: 134 GHAILVGHSLGARNSVTAAAKYPDLVRSVVAID 166
>1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta
hydrolase, signaling protein; 2.50A {Bacillus subtilis}
PDB: 1wpr_A*
Length = 271
Score = 30.7 bits (70), Expect = 0.051
Identities = 6/30 (20%), Positives = 14/30 (46%)
Query: 53 DRIVIGGFSQGGALALYSALTYPKKLAGVV 82
V G S G + + +++ P+ + +V
Sbjct: 90 KETVFVGHSVGALIGMLASIRRPELFSHLV 119
>1b0z_A Protein (phosphoglucose isomerase); autocrinefactor, neuroleukin,
crystallography motility; 2.30A {Geobacillus
stearothermophilus} SCOP: c.80.1.2 PDB: 1c7q_A* 1c7r_A*
2pgi_A
Length = 445
Score = 30.4 bits (69), Expect = 0.055
Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 10/70 (14%)
Query: 8 GYPMPSWFDLISLDVNAKEDETGIKRAAQKIHSIIDKEVSAGIPSDRIVIGGFSQGGALA 67
G W D K + + IK+AA++I + D V G IGG S GA A
Sbjct: 40 GSDFLGWVDWPIRY--DKNEFSRIKQAAERIRNHSDALVVIG-------IGG-SYLGARA 89
Query: 68 LYSALTYPKK 77
AL++
Sbjct: 90 AIEALSHTFH 99
>3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured
bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A*
3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A
Length = 322
Score = 30.3 bits (69), Expect = 0.060
Identities = 13/54 (24%), Positives = 20/54 (37%), Gaps = 6/54 (11%)
Query: 49 GIPSDRIVIGGFSQGGALALYSALT-----YPKKLAGVVALSCWLPMHKSFPAI 97
G + I G S GG L L ++ P A + +S W M + +
Sbjct: 145 GFKPQHLSISGDSAGGGLVLAVLVSARDQGLP-MPASAIPISPWADMTCTNDSF 197
>3h04_A Uncharacterized protein; protein with unknown function, structural
genomics, MCSG, PS protein structure initiative; 1.90A
{Staphylococcus aureus subsp}
Length = 275
Score = 30.2 bits (68), Expect = 0.061
Identities = 9/41 (21%), Positives = 16/41 (39%), Gaps = 2/41 (4%)
Query: 44 KEVSAGIPSDRIVIGGFSQGGALALYSALTYPKKLAGVVAL 84
+ + + I G S G L+L A + + GV+
Sbjct: 87 DAIQSQYSNCPIFTFGRSSGAYLSLLIARD--RDIDGVIDF 125
>2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular
permutation, hydrolase; HET: NAG RB3; 1.66A
{Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A*
Length = 318
Score = 30.6 bits (68), Expect = 0.063
Identities = 6/41 (14%), Positives = 14/41 (34%)
Query: 49 GIPSDRIVIGGFSQGGALALYSALTYPKKLAGVVALSCWLP 89
+ + + + G + GG +A + Y + P
Sbjct: 7 NVNPNSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGP 47
>2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK;
1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A*
2wug_A* 2vf2_A
Length = 291
Score = 30.4 bits (69), Expect = 0.063
Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 5/56 (8%)
Query: 27 DETGIKRAAQKIHSIIDKEVSAGIPSDRIVIGGFSQGGALALYSALTYPKKLAGVV 82
+ AA + + D+ G+ R+ + G + GG A+ AL YP + +V
Sbjct: 85 HGQFNRYAAMALKGLFDQ---LGL--GRVPLVGNALGGGTAVRFALDYPARAGRLV 135
>3o0d_A YALI0A20350P, triacylglycerol lipase; alpha/beta-hydrolase, lipids
binding, glycosylation, extracellular, hydrolase; HET:
NAG; 1.70A {Yarrowia lipolytica}
Length = 301
Score = 30.4 bits (68), Expect = 0.064
Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Query: 29 TGIKRAAQKIHSIIDKEVSAGI---PSDRIVIGGFSQGGALALYSAL 72
G ++ ++ I ++ + I P +I + G S GGA AL +
Sbjct: 127 NGFIQSYNNTYNQIGPKLDSVIEQYPDYQIAVTGHSLGGAAALLFGI 173
>2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB:
3cxu_A*
Length = 328
Score = 30.1 bits (68), Expect = 0.070
Identities = 8/38 (21%), Positives = 16/38 (42%)
Query: 49 GIPSDRIVIGGFSQGGALALYSALTYPKKLAGVVALSC 86
+++ + G +A + L P K+ +V LS
Sbjct: 100 APNEEKVFVVAHDWGALIAWHLCLFRPDKVKALVNLSV 137
>3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus
subsp}
Length = 326
Score = 30.0 bits (68), Expect = 0.074
Identities = 11/50 (22%), Positives = 20/50 (40%), Gaps = 6/50 (12%)
Query: 44 KEVSAGIPSDRIVIGGFSQGGALALYSALTYPKKL-----AGVVALSCWL 88
++ + + +V+ G GGALAL S + + +S L
Sbjct: 155 DQLVSEVGHQNVVVMGDGSGGALAL-SFVQSLLDNQQPLPNKLYLISPIL 203
>1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta
hydrolase fold, mutant M99T; 1.50A {Streptomyces
aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A
Length = 277
Score = 29.9 bits (68), Expect = 0.076
Identities = 10/39 (25%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Query: 53 DRIVIGGFSQGGALAL-YSALTYPKKLAGVVALSCWLPM 90
V+ GFS G Y + ++A V L+ P
Sbjct: 90 QDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPF 128
>3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta
hydrolase, alternative splicing, hydrolase,
mitochondrion, polymorphism, serine esterase; 2.10A
{Homo sapiens}
Length = 446
Score = 30.1 bits (67), Expect = 0.080
Identities = 10/37 (27%), Positives = 13/37 (35%)
Query: 51 PSDRIVIGGFSQGGALALYSALTYPKKLAGVVALSCW 87
+ + G S+GG L L A A VV
Sbjct: 239 KGPGVGLLGISKGGELCLSMASFLKGITAAVVINGSV 275
>3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610,
O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A
{Bacillus anthracis str}
Length = 377
Score = 30.0 bits (68), Expect = 0.086
Identities = 11/38 (28%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 49 GIPSDRIVIGGFSQGGALALYSALTYPKKLAGVVALSC 86
GI V+G S GG +A A+ YP + ++ +
Sbjct: 144 GIARLHAVMGP-SAGGMIAQQWAVHYPHMVERMIGVIT 180
>3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase
BPO-A2 and matrix...; protein design, bionanotechnology;
3.00A {Streptomyces aureofaciens} PDB: 4d9j_A
Length = 456
Score = 30.2 bits (68), Expect = 0.087
Identities = 11/39 (28%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Query: 53 DRIVIGGFSQGGAL-ALYSALTYPKKLAGVVALSCWLPM 90
V+ GFS G A Y + ++A V L+ P
Sbjct: 91 QDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEPF 129
>1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI,
protein structure initiative, TB structural genomics
consortium, TBSGC; 2.70A {Mycobacterium tuberculosis}
SCOP: c.69.1.3
Length = 304
Score = 29.8 bits (67), Expect = 0.094
Identities = 8/33 (24%), Positives = 15/33 (45%)
Query: 53 DRIVIGGFSQGGALALYSALTYPKKLAGVVALS 85
+ G S + AL A+ +P++ A+S
Sbjct: 119 TGSAVVGLSMAASSALTLAIYHPQQFVYAGAMS 151
>1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate
inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa}
SCOP: c.69.1.18
Length = 285
Score = 29.6 bits (66), Expect = 0.099
Identities = 10/57 (17%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Query: 29 TGIKRAAQKIHSIIDKEVSAGIPSDRIVIGGFSQGGALALYSALTYPKKLAGVVALS 85
+ +++ ++ E+ A ++ + G S GG Y A P +A ++
Sbjct: 51 DTSEVRGEQLLQQVE-EIVALSGQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSVG 106
>1tia_A Lipase; hydrolase(carboxylic esterase); 2.10A {Penicillium
camemberti} SCOP: c.69.1.17
Length = 279
Score = 29.9 bits (67), Expect = 0.10
Identities = 14/58 (24%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Query: 30 GIKRAAQKIHSIIDKEVSAGI---PSDRIVIGGFSQGGALALYSALTYPKKLAGVVAL 84
G + + + I KE+ + P+ +V+ G S G A+A +A K L
Sbjct: 111 GFWSSWKLVRDDIIKELKEVVAQNPNYELVVVGHSLGAAVATLAATDLRGKGYPSAKL 168
>1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus
subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A*
2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A
3qmm_A
Length = 181
Score = 29.7 bits (67), Expect = 0.11
Identities = 14/57 (24%), Positives = 21/57 (36%), Gaps = 3/57 (5%)
Query: 31 IKRAAQKIHSIIDKEVSAGIPSDRIVIGGFSQGGALALY--SALTYPKKLAGVVALS 85
+ + +V + ++ I S GGA LY L K+A VV L
Sbjct: 48 NYNNGPVLSRFVQ-KVLDETGAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLG 103
>3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family,
catalytic triad, kinetics, proposed reaction mechanism;
HET: MSE; 2.01A {Agrobacterium tumefaciens}
Length = 278
Score = 29.6 bits (66), Expect = 0.11
Identities = 11/36 (30%), Positives = 15/36 (41%)
Query: 50 IPSDRIVIGGFSQGGALALYSALTYPKKLAGVVALS 85
R I G S GG A+ AL P++ A +
Sbjct: 137 ADMSRQSIFGHSMGGHGAMTIALKNPERFKSCSAFA 172
>3ngm_A Extracellular lipase; secret lipase, hydrolase; 2.80A {Gibberella
zeae}
Length = 319
Score = 29.6 bits (66), Expect = 0.12
Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Query: 28 ETGIKRAAQKIHSIIDKEVSAGI---PSDRIVIGGFSQGGALALYSAL 72
+G + A +I + V+ PS ++V G S GGA+A +
Sbjct: 108 HSGFQNAWNEISAAATAAVAKARKANPSFKVVSVGHSLGGAVATLAGA 155
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A
4ao8_A
Length = 259
Score = 29.5 bits (65), Expect = 0.12
Identities = 8/61 (13%), Positives = 17/61 (27%), Gaps = 1/61 (1%)
Query: 24 AKEDETGIKRAAQKIHSIIDKEVSAGIPSDRIVIGGFSQGGALALYSALTYPKKLAGVVA 83
+ G + +D + A G S G + L + + ++
Sbjct: 120 MWHEGGGTAAVIADWAAALD-FIEAEEGPRPTGWWGLSMGTMMGLPVTASDKRIKVALLG 178
Query: 84 L 84
L
Sbjct: 179 L 179
>3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like
hydrolase, structural genomi center for structural
genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm
1728}
Length = 207
Score = 29.4 bits (66), Expect = 0.12
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Query: 31 IKRAAQKIHSIIDKEVSAGIPSDRIVIGGFSQGGALALYSALTYPKKLAGVVALSCWLPM 90
+K AA+ I + + G+ R VI G S GG + + + L YP + G++A++
Sbjct: 83 LKHAAEFIRDYLK---ANGV--ARSVIMGASMGGGMVIMTTLQYPDIVDGIIAVAPAWVE 137
Query: 91 H 91
Sbjct: 138 S 138
>3bxp_A Putative lipase/esterase; putative carboxylesterase, structural
genomics, joint center structural genomics, JCSG; HET:
EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A*
Length = 277
Score = 29.4 bits (66), Expect = 0.13
Identities = 7/26 (26%), Positives = 11/26 (42%)
Query: 49 GIPSDRIVIGGFSQGGALALYSALTY 74
+ RI++ GFS GG +
Sbjct: 105 HVDCQRIILAGFSAGGHVVATYNGVA 130
>3r0v_A Alpha/beta hydrolase fold protein; structural genomics,
PSI-biology, protein structure initiati alpha/beta
hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus}
Length = 262
Score = 29.2 bits (66), Expect = 0.13
Identities = 8/44 (18%), Positives = 13/44 (29%)
Query: 53 DRIVIGGFSQGGALALYSALTYPKKLAGVVALSCWLPMHKSFPA 96
+ G S G L+L +A + V + P
Sbjct: 87 GAAFVFGMSSGAGLSLLAAASGLPITRLAVFEPPYAVDDSRPPV 130
>1tgl_A Triacyl-glycerol acylhydrolase; carboxylic esterase; 1.90A
{Rhizomucor miehei} SCOP: c.69.1.17 PDB: 4tgl_A 5tgl_A*
3tgl_A
Length = 269
Score = 29.5 bits (66), Expect = 0.13
Identities = 13/48 (27%), Positives = 21/48 (43%), Gaps = 3/48 (6%)
Query: 28 ETGIKRAAQKIHSIIDKEVSAGI---PSDRIVIGGFSQGGALALYSAL 72
G + ++ + + V PS ++ + G S GGA AL AL
Sbjct: 108 HKGFLDSYGEVQNELVATVLDQFKQYPSYKVAVTGHSLGGATALLCAL 155
>1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI,
protein structure initiative, TB structural genomics
consortium; 1.50A {Mycobacterium tuberculosis} SCOP:
c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A*
Length = 280
Score = 29.4 bits (66), Expect = 0.14
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 57 IGGFSQGGALALYSALTYPKKLAGVVALS 85
G S G AL A YP++ +LS
Sbjct: 118 AVGLSMSGGSALILAAYYPQQFPYAASLS 146
>2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO
PSI-2, protein structure initiative, midwest center for
STR genomics, MCSG; 1.65A {Enterococcus faecalis}
Length = 274
Score = 29.4 bits (66), Expect = 0.14
Identities = 9/40 (22%), Positives = 12/40 (30%), Gaps = 3/40 (7%)
Query: 49 GIPSDRIVIGGFSQGGALALYSAL---TYPKKLAGVVALS 85
I + + G S GG L L T +V
Sbjct: 92 IIQNQSFGLCGRSAGGYLMLQLTKQLQTLNLTPQFLVNFY 131
>1lgy_A Lipase, triacylglycerol lipase; hydrolase (carboxylic ester); 2.20A
{Rhizopus niveus} SCOP: c.69.1.17 PDB: 1tic_A
Length = 269
Score = 29.1 bits (65), Expect = 0.17
Identities = 10/48 (20%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Query: 28 ETGIKRAAQKIHSIIDKEVSAGI---PSDRIVIGGFSQGGALALYSAL 72
G + +++ + V + P+ ++++ G S GGA AL + +
Sbjct: 109 HAGFLSSYEQVVNDYFPVVQEQLTAHPTYKVIVTGHSLGGAQALLAGM 156
>1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase);
PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10
Length = 285
Score = 28.8 bits (65), Expect = 0.20
Identities = 9/30 (30%), Positives = 15/30 (50%)
Query: 53 DRIVIGGFSQGGALALYSALTYPKKLAGVV 82
++ I G S GGA+ L + P++ V
Sbjct: 103 EKSHIVGNSMGGAVTLQLVVEAPERFDKVA 132
>1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A
{Streptomyces lividans} SCOP: c.69.1.12
Length = 275
Score = 28.8 bits (65), Expect = 0.20
Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
Query: 53 DRIVIGGFSQGGAL-ALYSALTYPKKLAGVVALSCWLPM 90
V G S GG A Y A P ++A V +S P+
Sbjct: 88 RGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPV 126
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta
propeller, hydrolase, oligop SIZE selectivity; HET: GOL;
1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A*
1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Length = 582
Score = 29.0 bits (65), Expect = 0.21
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 46 VSAGIPSDRIVIGGFSQGGALALYSALTYPKKLAGVVA 83
+G+ + I G+S GG + L + P VA
Sbjct: 431 RESGLA-SELYIMGYSYGGYMTLCALTMKPGLFKAGVA 467
>1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free
haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12
PDB: 1hl7_A*
Length = 279
Score = 28.9 bits (65), Expect = 0.21
Identities = 11/38 (28%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 53 DRIVIGGFSQGGAL-ALYSALTYPKKLAGVVALSCWLP 89
+V+ GFS G A Y A +++A + L+ P
Sbjct: 90 RDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEP 127
>3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A
{Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A*
Length = 316
Score = 28.8 bits (65), Expect = 0.21
Identities = 9/38 (23%), Positives = 14/38 (36%)
Query: 53 DRIVIGGFSQGGALALYSALTYPKKLAGVVALSCWLPM 90
+ G ALA + A P + G+ + PM
Sbjct: 95 TSAYLVAQDWGTALAFHLAARRPDFVRGLAFMEFIRPM 132
>3g7n_A Lipase; hydrolase fold, hydrolase; HET: 1PE; 1.30A {Penicillium
expansum}
Length = 258
Score = 28.7 bits (64), Expect = 0.23
Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 3/47 (6%)
Query: 29 TGIKRAAQKIHSIIDKEVSAGI---PSDRIVIGGFSQGGALALYSAL 72
G+ R +H I EV A I P + G S GGAL + +
Sbjct: 97 RGVHRPWSAVHDTIITEVKALIAKYPDYTLEAVGHSLGGALTSIAHV 143
>3bjr_A Putative carboxylesterase; structural genomics, joint center for
structural genomics, J protein structure initiative,
PSI-2; 2.09A {Lactobacillus plantarum WCFS1}
Length = 283
Score = 28.7 bits (64), Expect = 0.23
Identities = 8/37 (21%), Positives = 16/37 (43%)
Query: 49 GIPSDRIVIGGFSQGGALALYSALTYPKKLAGVVALS 85
I +I GFS GG + + ++A + ++
Sbjct: 120 HIDPQQITPAGFSVGGHIVALYNDYWATRVATELNVT 156
>3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase,
catalysis, protonation state, AB initio calculations,
substrate bindin; 1.05A {Hevea brasiliensis} SCOP:
c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A
3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A
7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A
1dwp_A ...
Length = 257
Score = 28.9 bits (64), Expect = 0.23
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 51 PSDRIVIGGFSQGGALALYSALTYPKKLAGVVALSCWLP 89
P +++++ G S GG +A Y +K+A V + LP
Sbjct: 70 PGEKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLP 108
>1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural
genomics, riken structural genomics/proteomics
initiative, RSGI; 1.60A {Thermus thermophilus} SCOP:
c.69.1.27
Length = 238
Score = 28.6 bits (63), Expect = 0.24
Identities = 6/42 (14%), Positives = 12/42 (28%)
Query: 50 IPSDRIVIGGFSQGGALALYSALTYPKKLAGVVALSCWLPMH 91
+ + G S G +A + + + PM
Sbjct: 102 RFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMK 143
>3nuz_A Putative acetyl xylan esterase; structural genomics, joint center
for structural genomics, J protein structure initiative,
PSI-biology; 2.30A {Bacteroides fragilis}
Length = 398
Score = 28.6 bits (63), Expect = 0.25
Identities = 9/43 (20%), Positives = 14/43 (32%), Gaps = 2/43 (4%)
Query: 52 SDRIVIGGFSQGGALALYSALTYPKKLAGVVALSCWLPMHKSF 94
DRIV+ GFS G + + +L +
Sbjct: 229 KDRIVVSGFSLGTEPMMVLGTLDTS--IYAFVYNDFLCQTQER 269
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase,
hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F}
PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Length = 267
Score = 28.4 bits (63), Expect = 0.26
Identities = 11/39 (28%), Positives = 22/39 (56%)
Query: 53 DRIVIGGFSQGGALALYSALTYPKKLAGVVALSCWLPMH 91
++I++ G + GG + T+P+K++ V LS +P
Sbjct: 81 EKIILVGHALGGLAISKAMETFPEKISVAVFLSGLMPGP 119
>1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic
acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET:
2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D
1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A
2es4_A 1tah_B 1qge_D 1qge_E
Length = 320
Score = 28.5 bits (63), Expect = 0.30
Identities = 13/68 (19%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Query: 18 ISLDVNAKEDETGIKRAAQKIHSIIDKEVSAGIPSDRIVIGGFSQGGALALYSALTYPKK 77
+++ + + G +++ + + V A + ++ + G SQGG + Y A P
Sbjct: 45 YVANLSGFQSDDGPNGRGEQLLAYVK-TVLAATGATKVNLVGHSQGGLTSRYVAAVAPDL 103
Query: 78 LAGVVALS 85
+A V +
Sbjct: 104 VASVTTIG 111
>3uue_A LIP1, secretory lipase (family 3); LID-domain, hydrolase; HET: NAG
BMA MAN; 1.45A {Malassezia globosa} PDB: 3uuf_A*
Length = 279
Score = 28.4 bits (63), Expect = 0.30
Identities = 12/56 (21%), Positives = 21/56 (37%), Gaps = 3/56 (5%)
Query: 28 ETGIKRAAQKIHSIIDKEVSAGI---PSDRIVIGGFSQGGALALYSALTYPKKLAG 80
G ++A + I V R+ + G S G A+ L A+ ++ G
Sbjct: 110 MHGFQQAYNDLMDDIFTAVKKYKKEKNEKRVTVIGHSLGAAMGLLCAMDIELRMDG 165
>1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A
{Streptomyces aureofaciens} SCOP: c.69.1.12
Length = 274
Score = 28.5 bits (64), Expect = 0.30
Identities = 9/38 (23%), Positives = 12/38 (31%), Gaps = 1/38 (2%)
Query: 53 DRIVIGGFSQGGALAL-YSALTYPKKLAGVVALSCWLP 89
+ + S GG Y +L V LS P
Sbjct: 86 RDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPP 123
>1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A
{Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A
1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A
2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A
Length = 310
Score = 28.2 bits (63), Expect = 0.32
Identities = 7/37 (18%), Positives = 14/37 (37%)
Query: 53 DRIVIGGFSQGGALALYSALTYPKKLAGVVALSCWLP 89
I + GG L L + P + ++ ++ L
Sbjct: 116 RNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAXLM 152
>2ory_A Lipase; alpha/beta hydrolase, hydrolase; 2.20A {Photobacterium SP}
Length = 346
Score = 28.2 bits (62), Expect = 0.35
Identities = 11/67 (16%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
Query: 6 NGGYPMPSWFDLISLDVNAKEDETGIKRAAQKIHSIIDKEVSAGIPSDRIVIGGFSQGGA 65
+ + + ++ I + I +++++ +I + G S+GGA
Sbjct: 120 GRILKISESTSYGLKTLQKLKPKSHIPGENKTILQFLNEKIGPE-GKAKICVTGHSKGGA 178
Query: 66 LALYSAL 72
L+ AL
Sbjct: 179 LSSTLAL 185
>1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP:
c.69.1.16
Length = 262
Score = 28.1 bits (62), Expect = 0.35
Identities = 11/49 (22%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Query: 43 DKEVSAGIPSDRIVIGGFSQGGALALYSALTYPKKLAGVVALSCWLPMH 91
V + + R+ + G S GG +L +A + L + L+ W
Sbjct: 113 RSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRT-SLKAAIPLTGWNTDK 160
>1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR
structure initiative, PSI, joint center for structural
GENO hydrolase; 2.10A {Thermotoga maritima} SCOP:
c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A*
Length = 337
Score = 28.3 bits (63), Expect = 0.35
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Query: 49 GIPSDRIVIGGFSQGGALALYSALTYP--KKLAGVVALSCWLP 89
+ +RIVI G SQGG +AL + K L V C
Sbjct: 188 QVDQERIVIAGGSQGGGIALAVSALSKKAKALLCDVPFLCHFR 230
>3qpd_A Cutinase 1; alpha-beta hydrolase fold, esterase, hydrolase, mono-
phosphorylated serine residue, secreted, phosphorylated
Ser residue; HET: SEP; 1.57A {Aspergillus oryzae} PDB:
3gbs_A
Length = 187
Score = 28.0 bits (62), Expect = 0.36
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 51 PSDRIVIGGFSQGGALALYSALTYPKKLAGVVA 83
P +IV GG+SQG A+ + + +
Sbjct: 91 PDTQIVAGGYSQGTAVMNGAIKRLSADVQDKIK 123
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich,
structural genomics, PSI-2, prote structure initiative;
1.74A {Klebsiella pneumoniae subsp}
Length = 241
Score = 28.0 bits (63), Expect = 0.36
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 49 GIPSDRIVIGGFSQGGALALYSALTYPKKLAGV 81
G + R++I GF GG + A P+ A V
Sbjct: 111 GGDAHRLLITGFCWGGRITWLYAAHNPQLKAAV 143
>1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region;
esterase, lipase, serine hydrolase, structural genomics;
HET: LI5; 1.70A {Saccharomyces cerevisiae}
Length = 243
Score = 28.3 bits (62), Expect = 0.37
Identities = 17/95 (17%), Positives = 28/95 (29%), Gaps = 18/95 (18%)
Query: 1 MPVTLNGGYPMPSWFDLISLDVNAKEDETGIKRAAQKIHSIIDKEVSAGIPSDRIVIGGF 60
TL+ ++ + E I + + I P D IV G
Sbjct: 62 WQATLDADVNRAWFYH------SEISHELDISEGLKSVVDHIKAN----GPYDGIV--GL 109
Query: 61 SQGGALALY------SALTYPKKLAGVVALSCWLP 89
SQG AL+ + + V +S +
Sbjct: 110 SQGAALSSIITNKISELVPDHPQFKVSVVISGYSF 144
>1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane
dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase;
0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB:
1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A
1iz8_A* 1k5p_A 1k63_A 1k6e_A
Length = 302
Score = 28.2 bits (63), Expect = 0.38
Identities = 8/39 (20%), Positives = 16/39 (41%)
Query: 52 SDRIVIGGFSQGGALALYSALTYPKKLAGVVALSCWLPM 90
DR+V+ G AL A + +++ G+ +
Sbjct: 99 GDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMP 137
>3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint
center for structural genomics, JCSG; HET: MSE; 1.90A
{Bacteroides vulgatus atcc 8482}
Length = 391
Score = 28.3 bits (62), Expect = 0.39
Identities = 11/42 (26%), Positives = 14/42 (33%), Gaps = 1/42 (2%)
Query: 50 IPSDRIVIGGFSQGGALALYSALTYPKKLAGVVALSCWLPMH 91
I DRIVI GFS G + + + V
Sbjct: 222 IRKDRIVISGFSLGTEPMMVLGVLDK-DIYAFVYNDFLCQTQ 262
>1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13
Length = 305
Score = 28.1 bits (62), Expect = 0.39
Identities = 7/71 (9%), Positives = 21/71 (29%), Gaps = 4/71 (5%)
Query: 27 DETGIKRAAQKIHSIIDKEVSAGIPSDRIVIGGFSQGGALALYSALTYPKKLAGVVALSC 86
DE + + ++ + G I + S +A +L+ ++
Sbjct: 82 DEFTMTTGKNSLCTVYHWLQTKGTQ--NIGLIAASLSARVAYEVI--SDLELSFLITAVG 137
Query: 87 WLPMHKSFPAI 97
+ + +
Sbjct: 138 VVNLRDTLEKA 148
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase,
decarboxylase, sulfate elimination, terminal alkene
production; 1.68A {Lyngbya majuscula 19L}
Length = 286
Score = 28.1 bits (63), Expect = 0.41
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 53 DRIVIGGFSQGGALALYSALTYPKKLAGVVALSCWLPM 90
+++ G S G LA A PKK+ ++ + LP
Sbjct: 95 QPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLPA 132
>3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural
genomics CEN infectious disease, tuberculosis, O LIPW,
heroin esterase; 1.75A {Mycobacterium marinum}
Length = 317
Score = 28.0 bits (63), Expect = 0.43
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 49 GIPSDRIVIGGFSQGGALALYSAL 72
G + R+ + G S G LA A
Sbjct: 154 GFDARRLAVAGSSAGATLAAGLAH 177
>1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold,
epoxide degradation, epichlorohydrin; 2.10A
{Agrobacterium tumefaciens} SCOP: c.69.1.11
Length = 294
Score = 28.0 bits (63), Expect = 0.44
Identities = 2/28 (7%), Positives = 5/28 (17%)
Query: 63 GGALALYSALTYPKKLAGVVALSCWLPM 90
+ Y ++ P
Sbjct: 109 AAIVLHKFIRKYSDRVIKAAIFDPIQPD 136
>3aja_A Putative uncharacterized protein; alpha-beta hydrolase, serine
esterase, cutinase, lipase, HYD; 2.90A {Mycobacterium
smegmatis}
Length = 302
Score = 28.0 bits (61), Expect = 0.47
Identities = 12/56 (21%), Positives = 20/56 (35%), Gaps = 5/56 (8%)
Query: 28 ETGIKRAAQKIHSIIDKEVSAGIPSDRIVIGGFSQGGALALYSALTYPKKLAGVVA 83
G++ + + +++ P VI GFSQG +A A V
Sbjct: 113 AEGMRTTVKAM-----TDMNDRCPLTSYVIAGFSQGAVIAGDIASDIGNGRGPVDE 163
>3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural
genomics, protein structure initiative, PSI-2; HET: MSE;
1.50A {Novosphingobium aromaticivorans}
Length = 285
Score = 27.7 bits (62), Expect = 0.47
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 53 DRIVIGGFSQGGALALYSALTYPKKLAGVV 82
+R V G S GG L + A P ++A V
Sbjct: 97 ERFVAIGTSLGGLLTMLLAAANPARIAAAV 126
>3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP,
serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo
sapiens}
Length = 446
Score = 28.0 bits (61), Expect = 0.48
Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Query: 31 IKRAAQKIHSIID--KEVSAGIPSDRIVIGGFSQGGALALYSALTYPKKLAGVVALS 85
++A +I K G + ++ G S GG LA + + YP + G +A S
Sbjct: 102 SEQALADFAELIKHLKRTIPGAENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAAS 158
>1tib_A Lipase; hydrolase(carboxylic esterase); 1.84A {Thermomyces
lanuginosus} SCOP: c.69.1.17 PDB: 1dt3_A 1dt5_A 1du4_A
1ein_A* 1dte_A 4dyh_A* 4ea6_A 1gt6_A*
Length = 269
Score = 27.9 bits (62), Expect = 0.49
Identities = 12/48 (25%), Positives = 21/48 (43%), Gaps = 3/48 (6%)
Query: 28 ETGIKRAAQKIHSIIDKEVSAGI---PSDRIVIGGFSQGGALALYSAL 72
G + + + + ++V + P R+V G S GGALA +
Sbjct: 110 HDGFTSSWRSVADTLRQKVEDAVREHPDYRVVFTGHSLGGALATVAGA 157
>2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural
genomics, PSI, structure initiative; 2.00A {Pseudomonas
aeruginosa}
Length = 367
Score = 27.7 bits (61), Expect = 0.51
Identities = 10/35 (28%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 53 DRIVIGGFSQGGALALYSALTYPKKLAGVVALSCW 87
+RI + G G +AL A+ K++ VV + +
Sbjct: 171 ERIGVIGICGWGGMALN-AVAVDKRVKAVVTSTMY 204
>3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2,
protein structure initiative; 3.20A {Lactococcus lactis
subsp}
Length = 276
Score = 27.9 bits (62), Expect = 0.53
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 49 GIPSDRIVIGGFSQGGALALYSALT 73
I +++ + G S GG LA + +
Sbjct: 115 QINPEQVFLLGCSAGGHLAAWYGNS 139
>1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP:
c.69.1.2 PDB: 1lzk_A
Length = 323
Score = 27.6 bits (62), Expect = 0.56
Identities = 11/19 (57%), Positives = 12/19 (63%)
Query: 49 GIPSDRIVIGGFSQGGALA 67
GI RI +GG S GG LA
Sbjct: 148 GIDPSRIAVGGQSAGGGLA 166
>2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase,
luciferase, oxidoreductase; 1.40A {Renilla reniformis}
PDB: 2pse_A 2psj_A* 2psh_A 2psf_A
Length = 318
Score = 27.4 bits (61), Expect = 0.67
Identities = 9/45 (20%), Positives = 21/45 (46%)
Query: 52 SDRIVIGGFSQGGALALYSALTYPKKLAGVVALSCWLPMHKSFPA 96
+I+ G G ALA + A + ++ +V + + + +S+
Sbjct: 110 PKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVVDVIESWDE 154
>2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural
mycobacterium tuberculosis structural proteomics
project, X hydrolase; 2.10A {Mycobacterium tuberculosis}
PDB: 2zjf_A*
Length = 356
Score = 27.3 bits (60), Expect = 0.69
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 53 DRIVIGGFSQGGALALYSALTYPKKLAGVVALS 85
++ + G G +A A +P + AGVV +S
Sbjct: 96 EQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGIS 128
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces
morookaensis} PDB: 3azp_A 3azq_A
Length = 662
Score = 27.5 bits (61), Expect = 0.71
Identities = 10/32 (31%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Query: 53 DRIVIGGFSQGGALALYSALTYPKKLAGVVAL 84
R+ + G S GG A S+L A L
Sbjct: 503 ARLAVRGGSAGGWTAA-SSLVSTDVYACGTVL 533
>2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid
indole alkaloids, PNAE, hydrolase, serine esterase; HET:
CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A*
Length = 264
Score = 27.2 bits (60), Expect = 0.74
Identities = 13/46 (28%), Positives = 26/46 (56%)
Query: 46 VSAGIPSDRIVIGGFSQGGALALYSALTYPKKLAGVVALSCWLPMH 91
+++ P +++V+ G S GG + TYP+K++ V +S +P
Sbjct: 72 MASIPPDEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAMMPDP 117
>3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG,
P structure initiative; 1.80A {Listeria innocua}
Length = 254
Score = 27.1 bits (59), Expect = 0.80
Identities = 7/56 (12%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Query: 22 VNAKEDETGIKRAAQKIHSIIDKEVSAGIPSDRIVIGGFSQGGALALYSALTYPKK 77
++++ ++ + + +++ + ++ G S GG Y A Y
Sbjct: 64 FGFEQNQATPDDWSKWLKIAM-EDLKSRYGFTQMDGVGHSNGGLALTYYAEDYAGD 118
>1uwc_A Feruloyl esterase A; hydrolase, serine esterase, xylan degradation;
HET: NAG FER; 1.08A {Aspergillus niger} SCOP: c.69.1.17
PDB: 1uza_A* 2hl6_A* 2ix9_A* 1usw_A* 2bjh_A*
Length = 261
Score = 27.2 bits (60), Expect = 0.83
Identities = 8/48 (16%), Positives = 16/48 (33%), Gaps = 3/48 (6%)
Query: 28 ETGIKRAAQKIHSIIDKEVSAGI---PSDRIVIGGFSQGGALALYSAL 72
G + ++ V P + + G S G ++A +A
Sbjct: 97 HGGYYIGWISVQDQVESLVKQQASQYPDYALTVTGHSLGASMAALTAA 144
>2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic
DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38
PDB: 2gzr_A*
Length = 278
Score = 27.3 bits (60), Expect = 0.86
Identities = 8/36 (22%), Positives = 11/36 (30%), Gaps = 1/36 (2%)
Query: 50 IPSDRIVIGGFSQGGALALYSALTYPKKLAGVVALS 85
I R + G S GG L + + S
Sbjct: 138 IDRQRRGLWGHSYGGLFVLD-SWLSSSYFRSYYSAS 172
>1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate
complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12
Length = 273
Score = 26.9 bits (60), Expect = 0.86
Identities = 11/45 (24%), Positives = 16/45 (35%), Gaps = 1/45 (2%)
Query: 53 DRIVIGGFSQGGALAL-YSALTYPKKLAGVVALSCWLPMHKSFPA 96
V+ GFS GG Y ++A +S P+ A
Sbjct: 86 RDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTEA 130
>2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei
structural genomics consortium, TBSGC, hydrolase; 1.19A
{Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A
Length = 297
Score = 27.0 bits (60), Expect = 0.89
Identities = 7/39 (17%), Positives = 15/39 (38%)
Query: 52 SDRIVIGGFSQGGALALYSALTYPKKLAGVVALSCWLPM 90
D +V+ G AL A + ++ G+ + +
Sbjct: 98 GDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVTP 136
>3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine
structural genomics, center for structural genomics of
INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella
typhimurium}
Length = 326
Score = 26.9 bits (60), Expect = 0.92
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 49 GIPSDRIVIGGFSQGGALALYSAL 72
+ ++I G S G LAL SAL
Sbjct: 156 SLNVEKIGFAGDSAGAMLALASAL 179
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism,
detoxification, magnesium, metal-binding, peroxisome;
HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P*
1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A*
1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Length = 555
Score = 27.2 bits (60), Expect = 0.92
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 63 GGALALYSALTYPKKLAGVVALSC 86
GG L Y AL YP+++ V +L+
Sbjct: 337 GGMLVWYMALFYPERVRAVASLNT 360
>1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida}
PDB: 4dgq_A
Length = 276
Score = 26.8 bits (60), Expect = 1.1
Identities = 10/39 (25%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Query: 53 DRIVIGGFSQGGALALYSALTYP-KKLAGVVALSCWLPM 90
V G S GG + +P K+A V ++ P+
Sbjct: 89 QGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAVPPL 127
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR
methyltransferase; 1.78A {Carboxydothermus
hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Length = 271
Score = 26.8 bits (60), Expect = 1.1
Identities = 7/35 (20%), Positives = 14/35 (40%), Gaps = 4/35 (11%)
Query: 27 DETGIKRAAQK----IHSIIDKEVSAGIPSDRIVI 57
+E G+ + A ++ + GIP + I
Sbjct: 134 NEKGVPKDANDRSQLAMELVANADAHGIPMTELYI 168
>2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase,
biodegradation, catal; HET: PG4; 1.20A {Paucimonas
lemoignei} PDB: 2vtv_A* 2x76_A
Length = 342
Score = 26.8 bits (58), Expect = 1.2
Identities = 11/67 (16%), Positives = 23/67 (34%), Gaps = 3/67 (4%)
Query: 21 DVNAKEDETGIKRAAQKIHSIIDKEVSAGIPSDRIVIGGFSQGGALALY--SALTYPKKL 78
+ + + I + IDK V A ++ I S G +++L +
Sbjct: 97 EQGSAQYNYHSSTKYAIIKTFIDK-VKAYTGKSQVDIVAHSMGVSMSLATLQYYNNWTSV 155
Query: 79 AGVVALS 85
+ L+
Sbjct: 156 RKFINLA 162
>3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A
{Escherichia coli} PDB: 3bf8_A
Length = 255
Score = 26.6 bits (59), Expect = 1.3
Identities = 8/32 (25%), Positives = 14/32 (43%)
Query: 53 DRIVIGGFSQGGALALYSALTYPKKLAGVVAL 84
D+ G S GG + P ++ +VA+
Sbjct: 81 DKATFIGHSMGGKAVMALTALAPDRIDKLVAI 112
>3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT
peroxidase, oxidoreductase; 1.74A {Bacillus anthracis
str}
Length = 281
Score = 26.6 bits (59), Expect = 1.3
Identities = 9/39 (23%), Positives = 14/39 (35%), Gaps = 1/39 (2%)
Query: 53 DRIVIGGFSQGGALAL-YSALTYPKKLAGVVALSCWLPM 90
+ + GFS GG Y + ++ VV P
Sbjct: 94 QNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPY 132
>2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A
{Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A*
Length = 484
Score = 26.8 bits (58), Expect = 1.3
Identities = 12/63 (19%), Positives = 23/63 (36%), Gaps = 5/63 (7%)
Query: 21 DVNAKEDETGIKRAAQKIHSIIDKEVSAGIPSDRIVIGGFSQGGALALYSALTYPKKLAG 80
+ +K E I ++ +ID+ A +D++ + G S G + Y
Sbjct: 97 KILSKSRERLIDETFSRLDRVIDE-ALAESGADKVDLVGHSMGTFFLVR----YVNSSPE 151
Query: 81 VVA 83
A
Sbjct: 152 RAA 154
>3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading
enzyme, RICE, virulence, innate immune responses,
pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A
3h2k_A* 3h2h_A 3h2i_A
Length = 397
Score = 26.8 bits (58), Expect = 1.3
Identities = 13/64 (20%), Positives = 25/64 (39%), Gaps = 5/64 (7%)
Query: 27 DETGIKRAAQKIHSIIDKEVSAGIPSDRIVIGGFSQGGALALYSALTYPKKLAGVVALSC 86
RAA+ + + S ++++ G+SQGG A+ + L+ L
Sbjct: 147 ATIDAMRAARSVLQHLKTP-----LSGKVMLSGYSQGGHTAMATQREIEAHLSKEFHLVA 201
Query: 87 WLPM 90
P+
Sbjct: 202 SAPI 205
>2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A
virulence facto LUNG infection; HET: MSE; 1.7A
{Streptococcus pneumoniae}
Length = 263
Score = 26.6 bits (59), Expect = 1.4
Identities = 8/33 (24%), Positives = 13/33 (39%), Gaps = 1/33 (3%)
Query: 53 DRIVIGGFSQGGALALYSALTYPKKLAGVVALS 85
++ I G S GG AL + + + S
Sbjct: 117 EKTFIAGLSMGGYGCFKLAL-TTNRFSHAASFS 148
>1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida
antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A*
1tcc_A*
Length = 317
Score = 26.3 bits (57), Expect = 1.5
Identities = 11/58 (18%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Query: 31 IKRAAQKIHSIIDKEVSAGIPSDRIVIGGFSQGGALALYSALTYP---KKLAGVVALS 85
+ + + + I + AG ++++ + +SQGG +A + +P K+ ++A +
Sbjct: 76 TQVNTEYMVNAIT-ALYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFA 132
>2wir_A Pesta, alpha/beta hydrolase fold-3 domain protein; tertiary
alcohol; 2.00A {Pyrobaculum calidifontis} PDB: 2yh2_A
3zwq_A
Length = 313
Score = 26.5 bits (59), Expect = 1.6
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 49 GIPSDRIVIGGFSQGGALALYSAL 72
G+ + +I + G S GG LA +A+
Sbjct: 145 GVDNGKIAVAGDSAGGNLAAVTAI 168
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR
methyltransferase; carbon dioxide fixation, cobalamin,
methyltatrahydrofolate; 2.20A {Moorella thermoacetica}
SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A*
2ogy_A*
Length = 262
Score = 26.4 bits (59), Expect = 1.6
Identities = 7/35 (20%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Query: 27 DETGI-KRAAQKI---HSIIDKEVSAGIPSDRIVI 57
++TGI K + ++ ++ G+P + + I
Sbjct: 125 NKTGIPKDSDTRLAFAMELVAAADEFGLPMEDLYI 159
>3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic
residues, glycoprotein, hydrolase, lipid degradation,
zymogen, disulf; HET: NAG BTB; 1.49A {Candida
antarctica} PDB: 3icw_A*
Length = 316
Score = 26.3 bits (57), Expect = 1.6
Identities = 11/58 (18%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Query: 31 IKRAAQKIHSIIDKEVSAGIPSDRIVIGGFSQGGALALYSALTYP---KKLAGVVALS 85
+ + + + I + AG ++++ + +SQGG +A + +P K+ ++A +
Sbjct: 110 TQVNTEYMVNAIT-TLYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFA 166
>2yij_A Phospholipase A1-iigamma; hydrolase; 2.00A {Arabidopsis thaliana}
Length = 419
Score = 26.2 bits (57), Expect = 1.6
Identities = 11/37 (29%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Query: 36 QKIHSIIDKEVSAGIPSDRIVIGGFSQGGALALYSAL 72
+++ +++K I I G S G ALA SA
Sbjct: 214 REVGRLLEKY---KDEEVSITICGHSLGAALATLSAT 247
>2czq_A Cutinase-like protein; alpha/beta hydrolase fold, hydrolase; HET:
CIT; 1.05A {Cryptococcus SP}
Length = 205
Score = 26.2 bits (57), Expect = 1.7
Identities = 9/38 (23%), Positives = 17/38 (44%), Gaps = 5/38 (13%)
Query: 30 GIKRAAQKIHSIIDKEVSAGIPSDRIVIGGFSQGGALA 67
G ++I+S + P+ ++ G+SQG A
Sbjct: 59 GTADIIRRINSGLAA-----NPNVCYILQGYSQGAAAT 91
>2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the
alpha/beta superfamily, structural genomics; HET: MSE
TLA P6G; 1.35A {Xanthomonas campestris PV}
Length = 176
Score = 26.0 bits (57), Expect = 1.7
Identities = 9/46 (19%), Positives = 15/46 (32%), Gaps = 2/46 (4%)
Query: 46 VSAGIPSDRIVIGGFSQGGALALYSALTYPKKLAGVVALSCWLPMH 91
A +V+ G S G +A +L P + + M
Sbjct: 67 ARAATEKGPVVLAGSSLGSYIAAQVSLQVP--TRALFLMVPPTKMG 110
>3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain,
catalytic triad (A His272, Glu130), mutant, I135F,
haloalkanes; 0.95A {Rhodococcus SP} PDB: 3fwh_A 3fbw_A
3rlt_A 3rk4_A 1bn6_A 1bn7_A 1cqw_A 2v9z_A
Length = 299
Score = 26.1 bits (58), Expect = 1.9
Identities = 8/37 (21%), Positives = 17/37 (45%)
Query: 53 DRIVIGGFSQGGALALYSALTYPKKLAGVVALSCWLP 89
+ +V+ G AL + A P+++ G+ + P
Sbjct: 98 EEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRP 134
>3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase;
1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A
3pi6_A
Length = 301
Score = 26.1 bits (58), Expect = 2.0
Identities = 4/27 (14%), Positives = 9/27 (33%)
Query: 63 GGALALYSALTYPKKLAGVVALSCWLP 89
G + +A +V + +P
Sbjct: 107 GIWNTYPMVVKNQADIARLVYMEAPIP 133
>3fwu_A Macrophage migration inhibitory factor-like protein; homotrimer,
tautomerase, cytokine; 1.80A {Leishmania major}
Length = 133
Score = 25.7 bits (56), Expect = 2.0
Identities = 12/62 (19%), Positives = 24/62 (38%), Gaps = 11/62 (17%)
Query: 3 VTLNGGYPMPSWFD-------LISLDVNAKEDETGIKRAAQKIHSIIDKEVSAGIPSDRI 55
+T + PM F + ++ + ++ + + I KE GI +DRI
Sbjct: 61 MTFHDSTPM--HFFGSTDPVACVRVEALGGYGPSEPEKVTSIVTAAITKEC--GIVADRI 116
Query: 56 VI 57
+
Sbjct: 117 FV 118
>3qpa_A Cutinase; alpha-beta hydrolase fold, esterase, hydrolase, mono-
phosphorylated serine residue, secreted; HET: MIR; 0.85A
{Nectria haematococca} PDB: 3qpc_A* 1cex_A 1oxm_A*
1cui_A 1cus_A 2cut_A 1cuj_A 1cuy_A 1xzl_A* 1xzk_A*
1xzm_A* 1cuh_A 1cuu_A 3esc_A* 1cua_A* 3esa_A* 3esb_A*
3ef3_A* 3esd_A* 1cux_A ...
Length = 197
Score = 25.8 bits (56), Expect = 2.1
Identities = 13/76 (17%), Positives = 24/76 (31%), Gaps = 7/76 (9%)
Query: 8 GYPMPSWFDLISLDVNAKEDETGIKRAAQKIHSIIDKEVSAGIPSDRIVIGGFSQGGALA 67
G + +L I+ ++ + P ++ GG+ QG ALA
Sbjct: 59 GGAYRATLGDNALPRGT--SSAAIREMLGLF-----QQANTKCPDATLIAGGYXQGAALA 111
Query: 68 LYSALTYPKKLAGVVA 83
S + +A
Sbjct: 112 AASIEDLDSAIRDKIA 127
>1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE;
2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2
Length = 311
Score = 26.1 bits (58), Expect = 2.1
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 49 GIPSDRIVIGGFSQGGALALYSAL 72
I +I +GG S GG LA ++
Sbjct: 148 RIDPSKIFVGGDSAGGNLAAAVSI 171
>2wkb_A Macrophage migration inhibitory factor; cytokine; HET: CME; 1.78A
{Plasmodium berghei} PDB: 3gad_A 3gac_A 2wkf_A*
Length = 125
Score = 25.7 bits (56), Expect = 2.3
Identities = 8/63 (12%), Positives = 18/63 (28%), Gaps = 13/63 (20%)
Query: 3 VTLNGGYPM-------PS-WFDLISLDVNAKEDETGIKRAAQKIHSIIDKEVSAGIPSDR 54
+ + + L S+ + + A KI I+ + + R
Sbjct: 40 SNYDYQKNLRFSGSNEGYCFVRLTSIGGINRSN---NSLLADKITKILSNHL--SVKPRR 94
Query: 55 IVI 57
+ I
Sbjct: 95 VYI 97
>2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme,
hydrolase, HSL, alpha/beta hydrolase fold; 2.3A
{Uncultured archaeon}
Length = 311
Score = 25.7 bits (57), Expect = 2.3
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 49 GIPSDRIVIGGFSQGGALALYSAL 72
G+ DRI + G S GG LA ++
Sbjct: 142 GVDPDRIAVAGDSAGGNLAAVVSI 165
>3n2o_A ADC, biosynthetic arginine decarboxylase; lyase; HET: PLP; 2.30A
{Vibrio vulnificus}
Length = 648
Score = 25.6 bits (56), Expect = 2.8
Identities = 4/52 (7%), Positives = 14/52 (26%), Gaps = 1/52 (1%)
Query: 9 YPMPSWFDLISLDVNAKEDETG-IKRAAQKIHSIIDKEVSAGIPSDRIVIGG 59
L+ + ++ ++ + + + G +GG
Sbjct: 243 ENQLDTLQLVHFHLGSQMANIRDVRNGVNESARFYCELRTLGANITYFDVGG 294
>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold,
cyanogenesis; 2.50A {Arabidopsis thaliana}
Length = 258
Score = 25.7 bits (56), Expect = 3.0
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 53 DRIVIGGFSQGGALALYSALTYPKKLAGVVALSCWLP 89
+ +++ GFS GG +A +P K+ +V L+ +LP
Sbjct: 73 EEVILVGFSFGGINIALAADIFPAKIKVLVFLNAFLP 109
>3kan_A D-dopachrome tautomerase; immune response, cytokine,
cytokine-inhibitor C; HET: RW1; 1.13A {Homo sapiens}
PDB: 1dpt_A* 3ker_A*
Length = 117
Score = 25.3 bits (55), Expect = 3.0
Identities = 8/44 (18%), Positives = 18/44 (40%), Gaps = 4/44 (9%)
Query: 14 WFDLISLDVNAKEDETGIKRAAQKIHSIIDKEVSAGIPSDRIVI 57
+ S+ V ++ + + + KE+ + DRI+I
Sbjct: 58 QLSISSIGVVGTAEDN--RSHSAHFFEFLTKEL--ALGQDRILI 97
>2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A
{Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A
1qz3_A
Length = 310
Score = 25.3 bits (56), Expect = 3.3
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 49 GIPSDRIVIGGFSQGGALALYSAL 72
+ RI +GG S GG LA +++
Sbjct: 143 HLDPARIAVGGDSAGGNLAAVTSI 166
>1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation,
pancreas, glycoprotein, chimeric; 2.01A {Cavia
porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B*
1n8s_A
Length = 432
Score = 25.3 bits (55), Expect = 3.6
Identities = 9/61 (14%), Positives = 19/61 (31%), Gaps = 1/61 (1%)
Query: 31 IKRAAQKIHSIIDK-EVSAGIPSDRIVIGGFSQGGALALYSALTYPKKLAGVVALSCWLP 89
I+ ++ ++ S + + I G S G A + + + L P
Sbjct: 123 IRVVGAEVAYLVQVLSTSLNYAPENVHIIGHSLGAHTAGEAGKRLNGLVGRITGLDPAEP 182
Query: 90 M 90
Sbjct: 183 Y 183
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl
oligopeptidase family, serine PR proline-specific
peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas
gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Length = 706
Score = 25.4 bits (56), Expect = 3.7
Identities = 10/34 (29%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Query: 52 SDRIVIGGFSQGGALALYSALTYPK--KLAGVVA 83
+DRI + G+S GG + LT+ K+
Sbjct: 568 ADRIGVHGWSYGGFMTTNLMLTHGDVFKVGVAGG 601
>3b64_A Macrophage migration inhibitory factor-like protein; cytokine,
MIF, LM1740MIF, lmmif, unknown function; 1.03A
{Leishmania major}
Length = 112
Score = 24.8 bits (54), Expect = 3.7
Identities = 12/62 (19%), Positives = 24/62 (38%), Gaps = 11/62 (17%)
Query: 3 VTLNGGYPMPSWFD-------LISLDVNAKEDETGIKRAAQKIHSIIDKEVSAGIPSDRI 55
+T + PM F + ++ + ++ + + I KE GI +DRI
Sbjct: 40 MTFHDSTPM--HFFGSTDPVACVRVEALGGYGPSEPEKVTSIVTAAITKEC--GIVADRI 95
Query: 56 VI 57
+
Sbjct: 96 FV 97
>2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase,
alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter
nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A*
Length = 276
Score = 25.1 bits (55), Expect = 3.8
Identities = 4/38 (10%), Positives = 13/38 (34%), Gaps = 1/38 (2%)
Query: 53 DRIVIGGFSQGGALAL-YSALTYPKKLAGVVALSCWLP 89
+ + S GG + + P++ + + +
Sbjct: 93 ETFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDWLMW 130
>1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein,
structural genomics, protein structure initiative, PSI;
HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB:
1y7i_A* 1y7h_A*
Length = 273
Score = 25.3 bits (55), Expect = 3.8
Identities = 10/39 (25%), Positives = 21/39 (53%)
Query: 53 DRIVIGGFSQGGALALYSALTYPKKLAGVVALSCWLPMH 91
+++++ G S GG + YP+K+ V L+ ++P
Sbjct: 73 EKVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDS 111
>3hc7_A Gene 12 protein, GP12; alpha/beta sandwich, cell adhesion; 2.00A
{Mycobacterium phage D29}
Length = 254
Score = 25.1 bits (54), Expect = 3.9
Identities = 8/40 (20%), Positives = 14/40 (35%), Gaps = 5/40 (12%)
Query: 28 ETGIKRAAQKIHSIIDKEVSAGIPSDRIVIGGFSQGGALA 67
E G+ +I + P + G+SQG +
Sbjct: 54 EKGVAELILQI-----ELKLDADPYADFAMAGYSQGAIVV 88
>2zf8_A MOTY, component of sodium-driven polar flagellar motor; beta
barrel, 2-layer sandwich, flagellum, structural protein;
2.85A {Vibrio alginolyticus}
Length = 278
Score = 25.3 bits (55), Expect = 3.9
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 4/29 (13%)
Query: 32 KRAAQKIHSIIDKEVSAGIPSDRIVIGGF 60
+RA S+ D S G+P DRI + G+
Sbjct: 218 RRAE----SLRDYFQSLGLPEDRIQVQGY 242
>3fwt_A Macrophage migration inhibitory factor-like protein; homotrimer,
tautomerase, cytokine; 1.90A {Leishmania major}
Length = 133
Score = 24.9 bits (54), Expect = 4.2
Identities = 13/63 (20%), Positives = 25/63 (39%), Gaps = 13/63 (20%)
Query: 3 VTLNGGYPM-------PS-WFDLISLDVNAKEDETGIKRAAQKIHSIIDKEVSAGIPSDR 54
+ P+ P+ + + S + + K +I + I KE GIP++R
Sbjct: 61 TAFSDKTPISFQGSTAPAAYVRVESWG---EYAPSKPKMMTPRIAAAITKEC--GIPAER 115
Query: 55 IVI 57
I +
Sbjct: 116 IYV 118
>1vkh_A Putative serine hydrolase; structural genomics, joint center
structural genomics, JCSG, protein structure initiative,
PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae}
SCOP: c.69.1.32
Length = 273
Score = 25.0 bits (54), Expect = 4.2
Identities = 4/21 (19%), Positives = 5/21 (23%)
Query: 53 DRIVIGGFSQGGALALYSALT 73
I + G S G
Sbjct: 114 TNINMVGHSVGATFIWQILAA 134
>3dcn_A Cutinase, cutin hydrolase; catalytic triad, secreted, serine
esterase; 1.90A {Glomerella cingulata} PDB: 3dd5_A
3dea_A*
Length = 201
Score = 25.0 bits (54), Expect = 4.4
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 51 PSDRIVIGGFSQGGALALYSALTYPKKLAGVVA 83
P+ IV GG+SQG A+ S + +
Sbjct: 103 PNAAIVSGGYSQGTAVMAGSISGLSTTIKNQIK 135
>1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A,
alpha/beta hydrolase family; 1.85A {Bacillus subtilis}
SCOP: c.69.1.2
Length = 361
Score = 25.1 bits (55), Expect = 4.4
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 53 DRIVIGGFSQGGALALYSAL 72
+V+ G S GG LA+ + L
Sbjct: 185 SGVVVQGESGGGNLAIATTL 204
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase
6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG
NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1
c.69.1.24
Length = 723
Score = 25.2 bits (55), Expect = 4.5
Identities = 6/30 (20%), Positives = 10/30 (33%)
Query: 52 SDRIVIGGFSQGGALALYSALTYPKKLAGV 81
R+ + G GG L+ Y +
Sbjct: 577 RTRVAVFGKDYGGYLSTYILPAKGENQGQT 606
>3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat
esterase family 15 (CE-15), N-linked glycosylation,
secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina}
Length = 375
Score = 25.2 bits (54), Expect = 4.5
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 48 AGIPSDRIVIGGFSQGGALALYSA 71
A I + +I + G S+ G A+ +
Sbjct: 180 ARIDTTKIGVTGCSRNGKGAMVAG 203
>3d7q_A XISI protein-like; structural genomics, joint center for
structural genomics, J protein structure initiative,
PSI-2; 2.30A {Nostoc punctiforme pcc 73102}
Length = 112
Score = 24.7 bits (54), Expect = 4.9
Identities = 7/20 (35%), Positives = 9/20 (45%)
Query: 39 HSIIDKEVSAGIPSDRIVIG 58
I + + GI IVIG
Sbjct: 78 ADIALELMEMGIDKQDIVIG 97
>2nwv_A XISI protein-like; YP_323822.1, structural genomics, PSI-2,
structure initiative, joint center for structural
genomics; 1.85A {Anabaena variabilis} SCOP: d.326.1.1
Length = 114
Score = 24.7 bits (54), Expect = 4.9
Identities = 4/20 (20%), Positives = 10/20 (50%)
Query: 39 HSIIDKEVSAGIPSDRIVIG 58
I + + G+ ++ IV+
Sbjct: 80 EGIATELMRLGVTNNDIVLA 99
>2nlv_A XISI protein-like; XISI-like protein, structural genomics, joint
center for STR genomics, JCSG, protein structure
initiative, PSI-2; HET: MSE; 1.30A {Anabaena
variabilis} SCOP: d.326.1.1
Length = 112
Score = 24.3 bits (53), Expect = 5.2
Identities = 6/20 (30%), Positives = 12/20 (60%)
Query: 39 HSIIDKEVSAGIPSDRIVIG 58
+ ++ V G+P + IV+G
Sbjct: 78 RNPAEELVMMGVPREDIVLG 97
>1x0u_A Hypothetical methylmalonyl-COA decarboxylase ALPH; lyase; 2.20A
{Sulfolobus tokodaii}
Length = 522
Score = 24.8 bits (55), Expect = 5.2
Identities = 10/31 (32%), Positives = 13/31 (41%), Gaps = 4/31 (12%)
Query: 35 AQKIHSIIDKEVSAGIPSDRIVIGGFSQGGA 65
A KI + + G P V+G GGA
Sbjct: 112 ANKIVRAYELALKVGAP----VVGINDSGGA 138
>2nvm_A FDXN element excision controlling factor XISI; YP_321976.1,
structural genomics, PSI-2, protein structure
initiative; 2.19A {Anabaena variabilis atcc 29413} SCOP:
d.326.1.1
Length = 126
Score = 24.5 bits (53), Expect = 5.3
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 39 HSIIDKEVSAGIPSDRIVIG 58
+I+D+ + AGIP I++G
Sbjct: 92 LAIVDEMLVAGIPQTDIILG 111
>2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas
mendocina}
Length = 258
Score = 25.0 bits (54), Expect = 5.5
Identities = 6/40 (15%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Query: 50 IPSDRIVIGGFSQGGALALYSALTYPKKLAGVVALSCWLP 89
+ + R+ G SQGG ++ + ++ + +
Sbjct: 115 LNTGRVGTSGHSQGGGGSIMAG--QDTRVRTTAPIQPYTL 152
>3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP}
Length = 291
Score = 24.9 bits (55), Expect = 5.5
Identities = 6/24 (25%), Positives = 11/24 (45%)
Query: 63 GGALALYSALTYPKKLAGVVALSC 86
G +A AL +P ++ + L
Sbjct: 106 GARVAHRLALDHPHRVKKLALLDI 129
>3djh_A Macrophage migration inhibitory factor; homotrimer, cytokine,
inflammatory response, isomerase, phosphoprotein; 1.25A
{Homo sapiens} PDB: 1ca7_A* 1ljt_A* 2ooh_A* 2ooz_A*
3b9s_A* 2oow_A* 3ce4_A 3dji_A* 3ijg_A* 3ijj_A* 1gd0_A*
1gcz_A* 3jsf_A* 3jsg_A* 3jtu_A* 3l5p_A* 3l5r_A* 3l5s_A*
3l5t_A* 3l5u_A* ...
Length = 114
Score = 24.5 bits (53), Expect = 5.6
Identities = 4/26 (15%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
Query: 32 KRAAQKIHSIIDKEVSAGIPSDRIVI 57
+ ++ + ++ + + I DR+ I
Sbjct: 73 RSYSKLLCGLLAERL--RISPDRVYI 96
>1hfo_A Migration inhibitory factor; tautomerase; 1.65A {Trichinella
spiralis} SCOP: d.80.1.3
Length = 113
Score = 24.2 bits (52), Expect = 6.5
Identities = 6/26 (23%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Query: 32 KRAAQKIHSIIDKEVSAGIPSDRIVI 57
+ + K+ ++ ++ GIP +R+ I
Sbjct: 73 RDHSAKLFDHLNTKL--GIPKNRMYI 96
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics,
unknown function, glycosidase, hydrolase, manganese,
metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Length = 450
Score = 24.7 bits (53), Expect = 6.5
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 56 VIGGFSQGGALALYSALTYPKKLAGVVAL 84
IGG SQG A +L S L+ ++++G VAL
Sbjct: 10 YIGGGSQGWARSLMSDLSIDERMSGTVAL 38
>1uiz_A MIF, macrophage migration inhibitory factor; cytokine,
tautomerase; 2.50A {Xenopus laevis} SCOP: d.80.1.3
Length = 115
Score = 24.1 bits (52), Expect = 6.7
Identities = 12/63 (19%), Positives = 23/63 (36%), Gaps = 13/63 (20%)
Query: 3 VTLNGGYPM-------PS-WFDLISLDVNAKEDETGIKRAAQKIHSIIDKEVSAGIPSDR 54
+ + M P L S+ K K + + I+ K++ IP++R
Sbjct: 40 IHIVPDQIMSFGDSTDPCAVCSLCSIG---KIGGPQNKSYTKLLCDILTKQL--NIPANR 94
Query: 55 IVI 57
+ I
Sbjct: 95 VYI 97
>3t5s_A Gilaa.00834.A, macrophage migration inhibitory factor; ssgcid,
structural genomics, seattle structural genomics CEN
infectious disease; 2.30A {Giardia lamblia}
Length = 135
Score = 24.2 bits (52), Expect = 6.9
Identities = 3/26 (11%), Positives = 9/26 (34%), Gaps = 2/26 (7%)
Query: 32 KRAAQKIHSIIDKEVSAGIPSDRIVI 57
+ I + + + +R+ I
Sbjct: 95 PSISAAITGCLTQHF--KVKPERVYI 118
>3n6r_B Propionyl-COA carboxylase, beta subunit; protein complex,
biotin-dependent carboxylase, ligase; HET: BTI; 3.20A
{Roseobacter denitrificans}
Length = 531
Score = 24.4 bits (54), Expect = 7.1
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 4/31 (12%)
Query: 35 AQKIHSIIDKEVSAGIPSDRIVIGGFSQGGA 65
++KI I+D + G P VIG GGA
Sbjct: 126 SKKICKIMDMAMQNGAP----VIGINDSGGA 152
>2bzr_A Propionyl-COA carboxylase beta chain 5; fatty acid biosynthesis,
accase, ligase, transferase; 2.2A {Mycobacterium
tuberculosis} PDB: 2a7s_A
Length = 548
Score = 24.5 bits (54), Expect = 7.6
Identities = 8/31 (25%), Positives = 13/31 (41%), Gaps = 4/31 (12%)
Query: 35 AQKIHSIIDKEVSAGIPSDRIVIGGFSQGGA 65
+KI + + + G P +IG GA
Sbjct: 129 GEKIVKVQELAIKTGRP----LIGINDGAGA 155
>3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A
{Mycobacterium tuberculosis}
Length = 330
Score = 24.3 bits (53), Expect = 7.6
Identities = 8/30 (26%), Positives = 12/30 (40%)
Query: 53 DRIVIGGFSQGGALALYSALTYPKKLAGVV 82
+ G S GG A+ A P + +V
Sbjct: 146 GAEFVVGMSLGGLTAIRLAAMAPDLVGELV 175
>3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase;
2.60A {Pseudomonas putida}
Length = 264
Score = 24.4 bits (53), Expect = 7.7
Identities = 6/44 (13%), Positives = 12/44 (27%), Gaps = 1/44 (2%)
Query: 53 DRIVIGGFSQGGALALYSALTY-PKKLAGVVALSCWLPMHKSFP 95
+ S G + + +L + + L H F
Sbjct: 87 RDFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLLQPHPGFW 130
>3iav_A Propionyl-COA carboxylase complex B subunit; accase, pccase, ACC,
PCC, CT, carboxyltransfe polyketide, fatty acid, PKS,
FAS; 1.75A {Streptomyces coelicolor} PDB: 1xnw_A 3ib9_A*
3ibb_A 3mfm_C 1xny_A* 1xnv_A* 1xo6_A
Length = 530
Score = 24.5 bits (54), Expect = 8.2
Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 4/31 (12%)
Query: 35 AQKIHSIIDKEVSAGIPSDRIVIGGFSQGGA 65
QKI ++D + G P V+G GGA
Sbjct: 118 GQKIVKVMDFALKTGCP----VVGINDSGGA 144
>3arx_A Chitinase A; TIM barrel, inhibitor complex, glycosidase, hydrolase,
hydro hydrolase inhibitor complex; HET: POY; 1.16A
{Vibrio harveyi} PDB: 3aro_A* 3arp_A* 3arr_A* 3arv_A*
3arw_A* 3arq_A* 3ary_A* 3arz_A* 3b8s_A 3b9e_A 3b9a_A*
3b9d_A 3as2_A* 3ars_A* 3art_A* 3as0_A* 3as1_A* 3aru_A*
3as3_A*
Length = 584
Score = 24.5 bits (53), Expect = 8.4
Identities = 9/50 (18%), Positives = 19/50 (38%)
Query: 9 YPMPSWFDLISLDVNAKEDETGIKRAAQKIHSIIDKEVSAGIPSDRIVIG 58
Y E+ K A + I ++ G+P++++V+G
Sbjct: 387 YCGSFMRPGQCDGGGVDENGEPYKGPAYTADNGIQLLLAQGVPANKLVLG 436
>2os5_A Acemif; macrophage migration inhibitory factor, cytokine,
nematode,; 1.60A {Ancylostoma ceylanicum} PDB: 3rf4_A*
3rf5_A*
Length = 119
Score = 23.7 bits (51), Expect = 8.7
Identities = 7/26 (26%), Positives = 12/26 (46%), Gaps = 2/26 (7%)
Query: 32 KRAAQKIHSIIDKEVSAGIPSDRIVI 57
R QKI + +P D+++I
Sbjct: 74 IRHTQKITQFCQDTL--KLPKDKVII 97
>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain
duplication, multienzyme complex, transcarboxylase; HET:
MCA; 1.90A {Propionibacterium freudenreichii} SCOP:
c.14.1.4 c.14.1.4 PDB: 1on9_A*
Length = 523
Score = 24.4 bits (54), Expect = 8.7
Identities = 6/31 (19%), Positives = 14/31 (45%), Gaps = 4/31 (12%)
Query: 35 AQKIHSIIDKEVSAGIPSDRIVIGGFSQGGA 65
+ K+ +++ + G P + + GGA
Sbjct: 116 STKVVETMEQALLTGTP----FLFFYDSGGA 142
>2xcz_A Possible ATLS1-like light-inducible protein; cytokine,
tautomerase, immune system, cyanobacterium; 1.64A
{Prochlorococcus marinus}
Length = 115
Score = 23.7 bits (51), Expect = 9.2
Identities = 8/26 (30%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
Query: 32 KRAAQKIHSIIDKEVSAGIPSDRIVI 57
+ ++ + I++ + GIP+DRI I
Sbjct: 74 QEVSELVCGHIEQNL--GIPADRIYI 97
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer
[decarboxylating]; alpha and beta protein (A/B) class;
HET: MES; 2.30A {Methanocaldococcus jannaschii}
Length = 183
Score = 24.1 bits (53), Expect = 9.6
Identities = 8/39 (20%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
Query: 45 EVSAGIPSDRIVIGGFSQGGALALYSALTYPKKLAGVVA 83
+V + ++ IGG + + KK+ +VA
Sbjct: 94 DVLDKLEFNKAFIGG---TKNIEKIIEILDKKKINHIVA 129
>1vrg_A Propionyl-COA carboxylase, beta subunit; TM0716, structural joint
center for structural genomics, JCSG, protein structu
initiative, PSI; HET: MSE; 2.30A {Thermotoga maritima}
SCOP: c.14.1.4 c.14.1.4
Length = 527
Score = 24.1 bits (53), Expect = 9.7
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 4/31 (12%)
Query: 35 AQKIHSIIDKEVSAGIPSDRIVIGGFSQGGA 65
A+KI ++D + GIP VIG GGA
Sbjct: 119 AKKIVKLLDLALKMGIP----VIGINDSGGA 145
>4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural
genomics, joint cente structural genomics, JCSG; HET:
MSE; 1.15A {Legionella pneumophila subsp}
Length = 377
Score = 24.1 bits (51), Expect = 9.8
Identities = 8/39 (20%), Positives = 19/39 (48%), Gaps = 5/39 (12%)
Query: 33 RAAQKIHSIIDKEVSAGIPSDRIVIGGFSQGGALALYSA 71
AA+++ + + SD++ + G+S+GG +
Sbjct: 146 FAAKELANRLHYP-----ISDKLYLAGYSEGGFSTIVMF 179
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.319 0.137 0.416
Gapped
Lambda K H
0.267 0.0636 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 1,539,849
Number of extensions: 84645
Number of successful extensions: 509
Number of sequences better than 10.0: 1
Number of HSP's gapped: 499
Number of HSP's successfully gapped: 230
Length of query: 97
Length of database: 6,701,793
Length adjustment: 63
Effective length of query: 34
Effective length of database: 4,942,770
Effective search space: 168054180
Effective search space used: 168054180
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 51 (23.6 bits)