RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy11077
(97 letters)
>d1fj2a_ c.69.1.14 (A:) Acyl protein thioesterase 1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 229
Score = 59.3 bits (142), Expect = 9e-13
Identities = 61/95 (64%), Positives = 78/95 (82%)
Query: 1 MPVTLNGGYPMPSWFDLISLDVNAKEDETGIKRAAQKIHSIIDKEVSAGIPSDRIVIGGF 60
PVTLN MPSWFD+I L +++EDE+GIK+AA+ I ++ID+EV GIPS+RI++GGF
Sbjct: 59 RPVTLNMNVAMPSWFDIIGLSPDSQEDESGIKQAAENIKALIDQEVKNGIPSNRIILGGF 118
Query: 61 SQGGALALYSALTYPKKLAGVVALSCWLPMHKSFP 95
SQGGAL+LY+ALT +KLAGV ALSCWLP+ SFP
Sbjct: 119 SQGGALSLYTALTTQQKLAGVTALSCWLPLRASFP 153
>d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374
{Mesorhizobium loti [TaxId: 381]}
Length = 209
Score = 40.4 bits (93), Expect = 6e-06
Identities = 13/87 (14%), Positives = 24/87 (27%), Gaps = 1/87 (1%)
Query: 6 NGGYPMPSWFDLISLDVNAKEDETGIKRAAQKIHSIIDKEVSA-GIPSDRIVIGGFSQGG 64
G P F + ++ I + ++ G+ D G+S G
Sbjct: 56 RGRIPQEDGFRWFERIDPTRFEQKSILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGA 115
Query: 65 ALALYSALTYPKKLAGVVALSCWLPMH 91
L L +P + L +
Sbjct: 116 NLVSSLMLLHPGIVRLAALLRPMPVLD 142
>d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase
{Penicillium funiculosum [TaxId: 28572]}
Length = 318
Score = 40.0 bits (93), Expect = 1e-05
Identities = 6/41 (14%), Positives = 14/41 (34%)
Query: 49 GIPSDRIVIGGFSQGGALALYSALTYPKKLAGVVALSCWLP 89
+ + + + G + GG +A + Y + P
Sbjct: 7 NVNPNSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGP 47
>d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis
[TaxId: 1773]}
Length = 280
Score = 34.1 bits (77), Expect = 0.001
Identities = 18/86 (20%), Positives = 30/86 (34%), Gaps = 6/86 (6%)
Query: 1 MPVTLNGGYPMPSWFDLISLDVNAKE-DETGIKRAAQKIHSIIDKEVSAGIPSDRIVIGG 59
MPV + + S N ET + +++ + + G+ G
Sbjct: 66 MPVGGQSSFYTDWYQPSQSNGQNYTYKWETFL---TREMPAWLQANK--GVSPTGNAAVG 120
Query: 60 FSQGGALALYSALTYPKKLAGVVALS 85
S G AL A YP++ +LS
Sbjct: 121 LSMSGGSALILAAYYPQQFPYAASLS 146
>d1r88a_ c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 267
Score = 33.7 bits (76), Expect = 0.002
Identities = 8/33 (24%), Positives = 14/33 (42%)
Query: 53 DRIVIGGFSQGGALALYSALTYPKKLAGVVALS 85
G +QGG A+ A +P + ++S
Sbjct: 105 GGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMS 137
>gi|115385463|ref|XP_001209278.1|(7-278:285) hypothetical protein
ATEG_09976 [Aspergillus terreus NIH2624]
gi|114187725|gb|EAU29425.1| hypothetical protein
ATEG_09976 [Aspergillus terreus NIH2624] E=1e-100
s/c=1.35 id=66% cov=100%
Length = 272
Score = 33.1 bits (75), Expect = 0.003
Identities = 10/46 (21%), Positives = 19/46 (41%), Gaps = 3/46 (6%)
Query: 30 GIKRAAQKIHSIIDKEVSAGI---PSDRIVIGGFSQGGALALYSAL 72
G + + + K + + P +V+ G S G A+A +A
Sbjct: 111 GFWTSWTNVRDSVMKHLKETMAANPDYELVVVGHSLGAAVATLAAA 156
>d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis
[TaxId: 1773]}
Length = 288
Score = 32.3 bits (72), Expect = 0.006
Identities = 8/33 (24%), Positives = 15/33 (45%)
Query: 53 DRIVIGGFSQGGALALYSALTYPKKLAGVVALS 85
+ G S + AL A+ +P++ A+S
Sbjct: 119 TGSAVVGLSMAASSALTLAIYHPQQFVYAGAMS 151
>d1qoza_ c.69.1.30 (A:) Acetylxylan esterase {Trichoderma reesei
[TaxId: 51453]}
Length = 207
Score = 31.6 bits (71), Expect = 0.009
Identities = 15/82 (18%), Positives = 23/82 (28%), Gaps = 5/82 (6%)
Query: 8 GYPMPSWFDLISLDVNAKEDETGIKRAAQKIHSIIDKEVSAGIPSDRIVIGGFSQGGALA 67
YP A G AA I P ++V+ G+SQG +
Sbjct: 42 VYPACGGQASCGGISYANSVVNGTNAAAAAI-----NNFHNSCPDTQLVLVGYSQGAQIF 96
Query: 68 LYSALTYPKKLAGVVALSCWLP 89
+ G+ + L
Sbjct: 97 DNALCGGGDPGEGITNTAVPLT 118
>d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]}
Length = 285
Score = 30.5 bits (68), Expect = 0.020
Identities = 10/41 (24%), Positives = 17/41 (41%)
Query: 45 EVSAGIPSDRIVIGGFSQGGALALYSALTYPKKLAGVVALS 85
E+ A ++ + G S GG Y A P +A ++
Sbjct: 66 EIVALSGQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSVG 106
>d1cexa_ c.69.1.30 (A:) Cutinase {Fungus (Fusarium solani), subsp.
pisi [TaxId: 169388]}
Length = 197
Score = 30.3 bits (68), Expect = 0.022
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Query: 30 GIKRAAQKIHSIIDKEVSAGIPSDRIVIGGFSQGGALALYSALTYP----KKLAGVV 82
G AA + + ++ + P ++ GG+SQG ALA S K+AG V
Sbjct: 73 GTSSAAIREMLGLFQQANTKCPDATLIAGGYSQGAALAAASIEDLDSAIRDKIAGTV 129
>d1g66a_ c.69.1.30 (A:) Acetylxylan esterase {Penicillium
purpurogenum [TaxId: 28575]}
Length = 207
Score = 29.3 bits (65), Expect = 0.058
Identities = 14/60 (23%), Positives = 22/60 (36%), Gaps = 5/60 (8%)
Query: 8 GYPMPSWFDLISLDVNAKEDETGIKRAAQKIHSIIDKEVSAGIPSDRIVIGGFSQGGALA 67
YP + GI A + ++ PS +IV+ G+SQGG +
Sbjct: 42 NYPACGGQSSCGGASYSSSVAQGIAAVASAV-----NSFNSQCPSTKIVLVGYSQGGEIM 96
>d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida
antarctica), form b [TaxId: 34362]}
Length = 317
Score = 28.5 bits (63), Expect = 0.11
Identities = 11/58 (18%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Query: 31 IKRAAQKIHSIIDKEVSAGIPSDRIVIGGFSQGGALALYSALTYP---KKLAGVVALS 85
+ + + + I + AG ++++ + +SQGG +A + +P K+ ++A +
Sbjct: 76 TQVNTEYMVNAIT-ALYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFA 132
>d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus
thermophilus [TaxId: 274]}
Length = 238
Score = 28.2 bits (61), Expect = 0.12
Identities = 6/44 (13%), Positives = 12/44 (27%)
Query: 48 AGIPSDRIVIGGFSQGGALALYSALTYPKKLAGVVALSCWLPMH 91
+ + G S G +A + + + PM
Sbjct: 100 ERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMK 143
>d1jjfa_ c.69.1.2 (A:) Feruloyl esterase domain of the cellulosomal
xylanase z {Clostridium thermocellum [TaxId: 1515]}
Length = 255
Score = 27.0 bits (58), Expect = 0.31
Identities = 12/54 (22%), Positives = 19/54 (35%)
Query: 38 IHSIIDKEVSAGIPSDRIVIGGFSQGGALALYSALTYPKKLAGVVALSCWLPMH 91
+ I+ S + I G S GG + LT K A + +S +
Sbjct: 120 LIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAPNTY 173
>d2nvma1 d.326.1.1 (A:2-118) XisI {Anabaena variabilis [TaxId:
1172]}
Length = 117
Score = 25.6 bits (56), Expect = 0.71
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 39 HSIIDKEVSAGIPSDRIVIG 58
+I+D+ + AGIP I++G
Sbjct: 90 LAIVDEMLVAGIPQTDIILG 109
>d2nlva1 d.326.1.1 (A:1-111) Hypothetical protein Ava3825
{Anabaena variabilis [TaxId: 1172]}
Length = 111
Score = 25.8 bits (57), Expect = 0.72
Identities = 6/20 (30%), Positives = 12/20 (60%)
Query: 39 HSIIDKEVSAGIPSDRIVIG 58
+ ++ V G+P + IV+G
Sbjct: 77 RNPAEELVMMGVPREDIVLG 96
>d2nwva1 d.326.1.1 (A:2-113) Hypothetical protein Ava3320
{Anabaena variabilis [TaxId: 1172]}
Length = 112
Score = 25.4 bits (56), Expect = 0.88
Identities = 4/20 (20%), Positives = 10/20 (50%)
Query: 39 HSIIDKEVSAGIPSDRIVIG 58
I + + G+ ++ IV+
Sbjct: 78 EGIATELMRLGVTNNDIVLA 97
>d1txda1 a.87.1.1 (A:766-999) Rho guanine nucleotide exchange
factor 12 {Human (Homo sapiens), gamma isoform [TaxId:
9606]}
Length = 234
Score = 25.5 bits (55), Expect = 1.2
Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
Query: 12 PSWFDLISLDVNAKEDETGIKRAAQK-IHSIIDKEVS 47
P+W L+S +V IKR Q+ I+ + E +
Sbjct: 2 PNWQQLVSREVLLGLKPCEIKR--QEVINELFYTERA 36
>d1hfoa_ d.80.1.3 (A:) Microphage migration inhibition factor
(MIF) {Trichinella spiralis [TaxId: 6334]}
Length = 113
Score = 25.1 bits (55), Expect = 1.2
Identities = 11/63 (17%), Positives = 26/63 (41%), Gaps = 13/63 (20%)
Query: 3 VTLNGGYPM-------PS-WFDLISLDVNAKEDETGIKRAAQKIHSIIDKEVSAGIPSDR 54
V +N + P+ + L+S+ + + K+ ++ ++ GIP +R
Sbjct: 39 VHINTDQQLSFGGSTNPAAFGTLMSIGGIEPSR---NRDHSAKLFDHLNTKL--GIPKNR 93
Query: 55 IVI 57
+ I
Sbjct: 94 MYI 96
>d1dpta_ d.80.1.3 (A:) D-dopachrome tautomerase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 117
Score = 25.2 bits (55), Expect = 1.2
Identities = 8/44 (18%), Positives = 18/44 (40%), Gaps = 4/44 (9%)
Query: 14 WFDLISLDVNAKEDETGIKRAAQKIHSIIDKEVSAGIPSDRIVI 57
+ S+ V ++ + + + KE+ + DRI+I
Sbjct: 58 QLSISSIGVVGTAEDN--RSHSAHFFEFLTKEL--ALGQDRILI 97
>d1bu8a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 338
Score = 25.1 bits (54), Expect = 1.6
Identities = 7/55 (12%), Positives = 16/55 (29%)
Query: 41 IIDKEVSAGIPSDRIVIGGFSQGGALALYSALTYPKKLAGVVALSCWLPMHKSFP 95
+ G + + + G S G + + + + L P + P
Sbjct: 134 VQVLSTEMGYSPENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAEPCFQGLP 188
>d1lgya_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizopus niveus
[TaxId: 4844]}
Length = 265
Score = 24.8 bits (53), Expect = 2.2
Identities = 14/79 (17%), Positives = 31/79 (39%), Gaps = 9/79 (11%)
Query: 3 VTLNGGYPMPSWFDLISLDVNAKEDETGIK------RAAQKIHSII---DKEVSAGIPSD 53
+ G S I + + + G K + +++ + +E P+
Sbjct: 74 LVFRGTNSFRSAITDIVFNFSDYKPVKGAKVHAGFLSSYEQVVNDYFPVVQEQLTAHPTY 133
Query: 54 RIVIGGFSQGGALALYSAL 72
++++ G S GGA AL + +
Sbjct: 134 KVIVTGHSLGGAQALLAGM 152
>d1n62b2 d.133.1.1 (B:147-809) Carbon monoxide (CO) dehydrogenase
molybdoprotein {Oligotropha carboxidovorans, formerly
Pseudomonas carboxydovorans [TaxId: 40137]}
Length = 663
Score = 25.0 bits (53), Expect = 2.3
Identities = 6/22 (27%), Positives = 13/22 (59%)
Query: 56 VIGGFSQGGALALYSALTYPKK 77
V GG ++ A+A+ + Y ++
Sbjct: 553 VHGGLTEAFAVAMGQEIRYDEQ 574
>d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio
harveyi [TaxId: 669]}
Length = 302
Score = 24.1 bits (51), Expect = 3.2
Identities = 5/51 (9%), Positives = 13/51 (25%), Gaps = 2/51 (3%)
Query: 27 DETGIKRAAQKIHSIIDKEVSAGIPSDRIVIGGFSQGGALALYSALTYPKK 77
DE + + ++ + + I + S +A
Sbjct: 79 DEFTMTTGKNSLCTVYHWLQT--KGTQNIGLIAASLSARVAYEVISDLELS 127
>d1uiza_ d.80.1.3 (A:) Microphage migration inhibition factor
(MIF) {African clawed frog (Xenopus laevis) [TaxId:
8355]}
Length = 115
Score = 23.6 bits (51), Expect = 3.5
Identities = 7/26 (26%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Query: 32 KRAAQKIHSIIDKEVSAGIPSDRIVI 57
K + + I+ K++ IP++R+ I
Sbjct: 74 KSYTKLLCDILTKQL--NIPANRVYI 97
>d1w9pa1 c.1.8.5 (A:39-298,A:361-433) Chitinase 1 {Aspergillus
fumigatus [TaxId: 5085]}
Length = 333
Score = 24.0 bits (51), Expect = 3.8
Identities = 10/46 (21%), Positives = 20/46 (43%)
Query: 13 SWFDLISLDVNAKEDETGIKRAAQKIHSIIDKEVSAGIPSDRIVIG 58
S+ L N D + + +D + G+P+++IV+G
Sbjct: 212 SFSSLSGHQANVYNDTSNPLSTPFNTQTALDLYRAGGVPANKIVLG 257
>d1kwfa_ a.102.1.2 (A:) CelA cellulase {Clostridium thermocellum
[TaxId: 1515]}
Length = 363
Score = 23.8 bits (51), Expect = 4.3
Identities = 10/68 (14%), Positives = 18/68 (26%)
Query: 3 VTLNGGYPMPSWFDLISLDVNAKEDETGIKRAAQKIHSIIDKEVSAGIPSDRIVIGGFSQ 62
N Y P+W+ + + + Q + + G+ D G
Sbjct: 177 SVTNPSYFAPAWYKVYAQYTGDTRWNQVADKCYQIVEEVKKYNNGTGLVPDWCTASGTPA 236
Query: 63 GGALALYS 70
G Y
Sbjct: 237 SGQSYDYK 244
>d1t3qb2 d.133.1.1 (B:166-786) Quinoline 2-oxidoreductase large
subunit QorL {Pseudomonas putida [TaxId: 303]}
Length = 621
Score = 23.8 bits (50), Expect = 4.4
Identities = 5/19 (26%), Positives = 8/19 (42%)
Query: 56 VIGGFSQGGALALYSALTY 74
+ GG +Q L + Y
Sbjct: 514 IRGGIAQAIGQTLLEEVIY 532
>d1v97a5 d.133.1.1 (A:695-1332) Xanthine oxidase, C-terminal domain
{Cow (Bos taurus) [TaxId: 9913]}
Length = 638
Score = 24.1 bits (51), Expect = 4.4
Identities = 8/19 (42%), Positives = 8/19 (42%)
Query: 56 VIGGFSQGGALALYSALTY 74
V G F QG L L Y
Sbjct: 501 VEGAFVQGLGLFTLEELHY 519
>d1rm6a2 d.133.1.1 (A:134-769) 4-hydroxybenzoyl-CoA reductase alpha
subunit HrcA, C-terminal domain {Thauera aromatica
[TaxId: 59405]}
Length = 636
Score = 23.8 bits (50), Expect = 4.6
Identities = 6/19 (31%), Positives = 6/19 (31%)
Query: 56 VIGGFSQGGALALYSALTY 74
GG G AL Y
Sbjct: 530 TQGGVWMGMGQALSEETVY 548
>d1ffvb2 d.133.1.1 (B:147-803) Carbon monoxide (CO) dehydrogenase
molybdoprotein {Hydrogenophaga pseudoflava [TaxId:
47421]}
Length = 657
Score = 23.8 bits (50), Expect = 4.8
Identities = 5/19 (26%), Positives = 12/19 (63%)
Query: 56 VIGGFSQGGALALYSALTY 74
+ GG ++G A+A+ + +
Sbjct: 547 IHGGLTEGYAVAMGQQMPF 565
>d1lzla_ c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [TaxId:
1831]}
Length = 317
Score = 23.3 bits (48), Expect = 6.7
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 49 GIPSDRIVIGGFSQGGALALYSALTYP 75
GI RI +GG S GG LA + L
Sbjct: 147 GIDPSRIAVGGQSAGGGLAAGTVLKAR 173
>d1jrob2 d.133.1.1 (B:124-777) Xanthine dehydrogenase chain B,
C-terminal domain {Rhodobacter capsulatus [TaxId: 1061]}
Length = 654
Score = 23.3 bits (49), Expect = 7.2
Identities = 4/19 (21%), Positives = 7/19 (36%)
Query: 56 VIGGFSQGGALALYSALTY 74
+ G + QG L +
Sbjct: 541 IEGAYVQGAGWLTTEELVW 559
>d2ivya1 d.58.58.1 (A:2-89) Hypothetical protein SSO1404
{Sulfolobus solfataricus [TaxId: 2287]}
Length = 88
Score = 22.5 bits (48), Expect = 8.5
Identities = 4/31 (12%), Positives = 12/31 (38%)
Query: 27 DETGIKRAAQKIHSIIDKEVSAGIPSDRIVI 57
+ + +K + I +++ I+I
Sbjct: 41 NSSRLKDVEAGLKIIGNRKKLQEDERFFILI 71
>d1vlba4 d.133.1.1 (A:311-907) Aldehyde oxidoreductase
{Desulfovibrio gigas [TaxId: 879]}
Length = 597
Score = 23.1 bits (48), Expect = 8.5
Identities = 9/22 (40%), Positives = 11/22 (50%)
Query: 56 VIGGFSQGGALALYSALTYPKK 77
+ GG +QG LAL KK
Sbjct: 498 IYGGLAQGIGLALSEDFEDIKK 519
>d1ll7a1 c.1.8.5 (A:36-292,A:355-427) Chitinase 1 {Fungus
(Coccidioides immitis) [TaxId: 5501]}
Length = 330
Score = 22.9 bits (48), Expect = 9.2
Identities = 6/21 (28%), Positives = 13/21 (61%)
Query: 38 IHSIIDKEVSAGIPSDRIVIG 58
+ + AG+P+++IV+G
Sbjct: 234 SDKAVKDYIKAGVPANKIVLG 254
>d1vf8a1 c.1.8.5 (A:1-245,A:316-372) Chitinase-like lectin ym1,
saccharide binding domain {Mouse (Mus musculus) [TaxId:
10090]}
Length = 302
Score = 22.8 bits (48), Expect = 9.6
Identities = 6/21 (28%), Positives = 12/21 (57%)
Query: 38 IHSIIDKEVSAGIPSDRIVIG 58
+ SII G S+++++G
Sbjct: 222 VDSIISYWKDHGAASEKLIVG 242
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.137 0.416
Gapped
Lambda K H
0.267 0.0413 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 367,082
Number of extensions: 14801
Number of successful extensions: 91
Number of sequences better than 10.0: 1
Number of HSP's gapped: 91
Number of HSP's successfully gapped: 46
Length of query: 97
Length of database: 2,407,596
Length adjustment: 59
Effective length of query: 38
Effective length of database: 1,597,526
Effective search space: 60705988
Effective search space used: 60705988
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 47 (22.7 bits)