Your job contains 1 sequence.
>psy1108
MASRLGQMMMRKFSTSPAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEE
HHVRPEFVKREYLYIRNRN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy1108
(79 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|F1RJI7 - symbol:COX6A1 "Cytochrome c oxidase su... 115 4.8e-07 1
FB|FBgn0034877 - symbol:levy "levy" species:7227 "Drosoph... 109 2.1e-06 1
UNIPROTKB|P13182 - symbol:COX6A1 "Cytochrome c oxidase su... 106 4.3e-06 1
RGD|2384 - symbol:Cox6a1 "cytochrome c oxidase, subunit V... 106 4.3e-06 1
UNIPROTKB|F1MBC7 - symbol:F1MBC7 "Cytochrome c oxidase su... 103 9.0e-06 1
ZFIN|ZDB-GENE-030131-7715 - symbol:cox6a1 "cytochrome c o... 103 9.0e-06 1
UNIPROTKB|P12074 - symbol:COX6A1 "Cytochrome c oxidase su... 101 1.5e-05 1
UNIPROTKB|Q5T8I0 - symbol:COX6A1P2 "Protein COX6A1P2" spe... 101 1.5e-05 1
MGI|MGI:103099 - symbol:Cox6a1 "cytochrome c oxidase subu... 98 3.0e-05 1
UNIPROTKB|H0YIV9 - symbol:H0YIV9 "Uncharacterized protein... 97 4.2e-05 1
UNIPROTKB|J9P8X9 - symbol:LOC477508 "Cytochrome c oxidase... 97 0.00012 1
UNIPROTKB|E1C3B2 - symbol:COX6A1 "Cytochrome c oxidase su... 88 0.00035 1
RGD|2385 - symbol:Cox6a2 "cytochrome c oxidase subunit VI... 86 0.00057 1
UNIPROTKB|P10817 - symbol:Cox6a2 "Cytochrome c oxidase su... 86 0.00057 1
WB|WBGene00006519 - symbol:tag-174 species:6239 "Caenorha... 86 0.00057 1
UNIPROTKB|J9NWS5 - symbol:LOC100686830 "Uncharacterized p... 85 0.00072 1
MGI|MGI:104649 - symbol:Cox6a2 "cytochrome c oxidase subu... 84 0.00093 1
>UNIPROTKB|F1RJI7 [details] [associations]
symbol:COX6A1 "Cytochrome c oxidase subunit 6A,
mitochondrial" species:9823 "Sus scrofa" [GO:0005751 "mitochondrial
respiratory chain complex IV" evidence=IEA] [GO:0004129
"cytochrome-c oxidase activity" evidence=IEA] InterPro:IPR001349
InterPro:IPR018507 Pfam:PF02046 PIRSF:PIRSF000277 ProDom:PD006036
PROSITE:PS01329 GO:GO:0004129 GO:GO:0005751 KO:K02266
Gene3D:4.10.95.10 PANTHER:PTHR11504 SUPFAM:SSF81411
GeneTree:ENSGT00390000002756 CTD:1337 OMA:NAYLKHQ EMBL:CU468509
RefSeq:NP_001177150.1 UniGene:Ssc.16681 Ensembl:ENSSSCT00000010859
GeneID:100152232 KEGG:ssc:100152232 Uniprot:F1RJI7
Length = 109
Score = 115 (45.5 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 29/76 (38%), Positives = 44/76 (57%)
Query: 4 RLGQMMMRKFSTSPAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLE-HQAEEEHH 62
R Q+ +R+ P S+ G + ++W+ LTYF ALP + + V+L+ H AEEE
Sbjct: 14 RRSQLQLRR----PMSSSAHGEEGSARMWKTLTYFVALPGVGVSMLNVFLKSHHAEEE-- 67
Query: 63 VRPEFVKREYLYIRNR 78
RPEFV +L IR++
Sbjct: 68 -RPEFVPYPHLRIRSK 82
>FB|FBgn0034877 [details] [associations]
symbol:levy "levy" species:7227 "Drosophila melanogaster"
[GO:0004129 "cytochrome-c oxidase activity" evidence=ISS;IMP]
[GO:0005751 "mitochondrial respiratory chain complex IV"
evidence=IC;ISS] [GO:0006123 "mitochondrial electron transport,
cytochrome c to oxygen" evidence=ISS;IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0030234 "enzyme regulator activity"
evidence=IMP] InterPro:IPR001349 Pfam:PF02046 PIRSF:PIRSF000277
ProDom:PD006036 EMBL:AE013599 GO:GO:0008340 GO:GO:0030234
GO:GO:0005811 GO:GO:0004129 GO:GO:0006123 GO:GO:0005751
eggNOG:NOG279259 KO:K02266 Gene3D:4.10.95.10 PANTHER:PTHR11504
SUPFAM:SSF81411 GeneTree:ENSGT00390000002756 OMA:NAYLKHQ
EMBL:AY070648 RefSeq:NP_611805.1 UniGene:Dm.30932 SMR:Q9W1N3
STRING:Q9W1N3 EnsemblMetazoa:FBtr0072061 GeneID:37728
KEGG:dme:Dmel_CG17280 UCSC:CG17280-RA CTD:37728 FlyBase:FBgn0034877
InParanoid:Q9W1N3 OrthoDB:EOG46T1HZ ChiTaRS:levy GenomeRNAi:37728
NextBio:805107 Uniprot:Q9W1N3
Length = 109
Score = 109 (43.4 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 30/84 (35%), Positives = 44/84 (52%)
Query: 1 MASRLGQMMMRKFSTSPAMKSS-----AG-NPDAVKLWRNLTYFGALPCCALVGVYVYLE 54
M++ L + R+F S A S AG + K+W+ L++F A+P L + YL+
Sbjct: 1 MSAILNHAIRRQFGASAARNMSGTAAVAGEHSGGYKVWKRLSFFVAVPAVGLCMLNAYLK 60
Query: 55 HQAEEEHHVRPEFVKREYLYIRNR 78
HQ EE R EFVK +YL R +
Sbjct: 61 HQ-EEHDKPRQEFVKYDYLRRREK 83
>UNIPROTKB|P13182 [details] [associations]
symbol:COX6A1 "Cytochrome c oxidase subunit 6A1,
mitochondrial" species:9913 "Bos taurus" [GO:0005751 "mitochondrial
respiratory chain complex IV" evidence=IEA] [GO:0004129
"cytochrome-c oxidase activity" evidence=IEA] InterPro:IPR001349
InterPro:IPR018507 Pfam:PF02046 PIRSF:PIRSF000277 ProDom:PD006036
PROSITE:PS01329 GO:GO:0004129 GO:GO:0005751 eggNOG:NOG279259
HOGENOM:HOG000193965 KO:K02266 Gene3D:4.10.95.10 PANTHER:PTHR11504
SUPFAM:SSF81411 GeneTree:ENSGT00390000002756 EMBL:BC114182
EMBL:M38520 IPI:IPI00715456 PIR:S18314 RefSeq:NP_001071299.1
RefSeq:XP_003585081.1 UniGene:Bt.7193 ProteinModelPortal:P13182
SMR:P13182 STRING:P13182 PRIDE:P13182 Ensembl:ENSBTAT00000016993
GeneID:100851363 GeneID:282199 KEGG:bta:100851363 KEGG:bta:282199
CTD:1337 HOVERGEN:HBG060482 InParanoid:P13182 OMA:NAYLKHQ
OrthoDB:EOG4N04GG NextBio:20806024 Uniprot:P13182
Length = 109
Score = 106 (42.4 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 30/79 (37%), Positives = 45/79 (56%)
Query: 3 SRLGQMMMR-KFSTSPAMKSSA-GNPDAVKLWRNLTYFGALPCCALVGVYVYLE-HQAEE 59
SR+ ++ R + S M S A G + ++W+ LTYF ALP + + V+L+ H EE
Sbjct: 7 SRVFGLLGRSRLQLSRCMSSGAHGEEGSARMWKALTYFVALPGVGVSMLNVFLKSHHGEE 66
Query: 60 EHHVRPEFVKREYLYIRNR 78
E RPEFV +L IR++
Sbjct: 67 E---RPEFVAYPHLRIRSK 82
>RGD|2384 [details] [associations]
symbol:Cox6a1 "cytochrome c oxidase, subunit VIa, polypeptide 1"
species:10116 "Rattus norvegicus" [GO:0004129 "cytochrome-c oxidase
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0005751 "mitochondrial respiratory chain complex IV"
evidence=IEA] InterPro:IPR001349 InterPro:IPR018507 Pfam:PF02046
PIRSF:PIRSF000277 ProDom:PD006036 PROSITE:PS01329 RGD:2384
GO:GO:0004129 GO:GO:0005751 eggNOG:NOG279259 HOGENOM:HOG000193965
KO:K02266 Gene3D:4.10.95.10 PANTHER:PTHR11504 SUPFAM:SSF81411
GeneTree:ENSGT00390000002756 CTD:1337 HOVERGEN:HBG060482 OMA:NAYLKHQ
OrthoDB:EOG4N04GG EMBL:X72757 EMBL:X12553 IPI:IPI00194042 PIR:S01156
PIR:S65379 RefSeq:NP_036946.1 UniGene:Rn.880
ProteinModelPortal:P10818 SMR:P10818 STRING:P10818 PRIDE:P10818
Ensembl:ENSRNOT00000001545 GeneID:25282 KEGG:rno:25282 UCSC:RGD:2384
InParanoid:P10818 NextBio:606005 Genevestigator:P10818
GermOnline:ENSRNOG00000001170 Uniprot:P10818
Length = 111
Score = 106 (42.4 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 2 ASRLGQMMMRKFS-TSPAMKSSA-GNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEE 59
ASR+ ++ R M S A G + ++W+ LTYF ALP + + V+L+ + EE
Sbjct: 8 ASRVSGLLGRALPRVGRPMSSGAHGEEGSARIWKALTYFVALPGVGVSMLNVFLKSRHEE 67
Query: 60 EHHVRPEFVKREYLYIRNR 78
H RPEFV +L IR +
Sbjct: 68 --HERPEFVAYPHLRIRTK 84
>UNIPROTKB|F1MBC7 [details] [associations]
symbol:F1MBC7 "Cytochrome c oxidase subunit 6A,
mitochondrial" species:9913 "Bos taurus" [GO:0005751 "mitochondrial
respiratory chain complex IV" evidence=IEA] [GO:0004129
"cytochrome-c oxidase activity" evidence=IEA] InterPro:IPR001349
InterPro:IPR018507 Pfam:PF02046 PIRSF:PIRSF000277 ProDom:PD006036
PROSITE:PS01329 GO:GO:0004129 GO:GO:0005751 Gene3D:4.10.95.10
PANTHER:PTHR11504 SUPFAM:SSF81411 GeneTree:ENSGT00390000002756
OMA:CMANAYM EMBL:DAAA02013686 IPI:IPI00708079 PRIDE:F1MBC7
Ensembl:ENSBTAT00000010543 NextBio:20870756 Uniprot:F1MBC7
Length = 109
Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 3 SRLGQMMMRK-FSTSPAMKSSA-GNPDAVKLWRNLTYFGALPCCALVGVYVYLE-HQAEE 59
SR+ ++ R S M S G + ++W+ LTYF ALP + + V+L+ H EE
Sbjct: 7 SRVSGLLGRSGLQLSRCMSSGTHGEEGSARIWKALTYFVALPGVGVSMLNVFLKSHHGEE 66
Query: 60 EHHVRPEFVKREYLYIRNR 78
E RPEFV +L IR++
Sbjct: 67 E---RPEFVAYPHLRIRSK 82
>ZFIN|ZDB-GENE-030131-7715 [details] [associations]
symbol:cox6a1 "cytochrome c oxidase subunit VIa
polypeptide 1" species:7955 "Danio rerio" [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0005751
"mitochondrial respiratory chain complex IV" evidence=IEA]
[GO:0004129 "cytochrome-c oxidase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001349 InterPro:IPR018507 Pfam:PF02046
PIRSF:PIRSF000277 ProDom:PD006036 PROSITE:PS01329
ZFIN:ZDB-GENE-030131-7715 GO:GO:0004129 GO:GO:0005751 KO:K02266
Gene3D:4.10.95.10 PANTHER:PTHR11504 SUPFAM:SSF81411 CTD:1337
HOVERGEN:HBG060482 EMBL:BC081530 IPI:IPI00773169
RefSeq:NP_001005592.1 UniGene:Dr.7906 ProteinModelPortal:Q642I9
SMR:Q642I9 STRING:Q642I9 PRIDE:Q642I9 GeneID:335774 KEGG:dre:335774
InParanoid:Q642I9 NextBio:20811022 ArrayExpress:Q642I9 Bgee:Q642I9
Uniprot:Q642I9
Length = 108
Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 26/77 (33%), Positives = 42/77 (54%)
Query: 4 RLGQMMMRK--FSTSPAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEH 61
RL Q + + + S + ++A +A K W+ LT+ ALP A+ + +YL Q H
Sbjct: 6 RLSQKLFKSAALTQSRQLSAAAHGENAAKTWKILTFVVALPGVAVCMLNMYLRSQ---HH 62
Query: 62 HVRPEFVKREYLYIRNR 78
H +PEFV +L IR++
Sbjct: 63 HEQPEFVPYSHLRIRSK 79
>UNIPROTKB|P12074 [details] [associations]
symbol:COX6A1 "Cytochrome c oxidase subunit 6A1,
mitochondrial" species:9606 "Homo sapiens" [GO:0004129
"cytochrome-c oxidase activity" evidence=IEA] [GO:0005751
"mitochondrial respiratory chain complex IV" evidence=IEA]
[GO:0006091 "generation of precursor metabolites and energy"
evidence=TAS] [GO:0005743 "mitochondrial inner membrane"
evidence=TAS] [GO:0022904 "respiratory electron transport chain"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] Reactome:REACT_111217 InterPro:IPR001349
InterPro:IPR018507 Pfam:PF02046 PIRSF:PIRSF000277 ProDom:PD006036
PROSITE:PS01329 GO:GO:0005743 GO:GO:0044281 GO:GO:0004129
GO:GO:0022904 GO:GO:0005751 eggNOG:NOG279259 HOGENOM:HOG000193965
KO:K02266 Gene3D:4.10.95.10 PANTHER:PTHR11504 SUPFAM:SSF81411
CTD:1337 HOVERGEN:HBG060482 OMA:NAYLKHQ OrthoDB:EOG4N04GG
EMBL:AK312009 EMBL:AL021546 EMBL:BC007723 EMBL:BC070186
EMBL:BC107861 EMBL:X15341 IPI:IPI00021793 RefSeq:NP_004364.2
UniGene:Hs.369624 ProteinModelPortal:P12074 SMR:P12074
IntAct:P12074 STRING:P12074 PhosphoSite:P12074 DMDM:6166030
SWISS-2DPAGE:P12074 PaxDb:P12074 PRIDE:P12074 DNASU:1337
Ensembl:ENST00000229379 GeneID:1337 KEGG:hsa:1337 UCSC:uc001tyf.1
GeneCards:GC12P120875 HGNC:HGNC:2277 MIM:602072 neXtProt:NX_P12074
PharmGKB:PA26794 InParanoid:P12074 PhylomeDB:P12074 ChiTaRS:COX6A1
GenomeRNAi:1337 NextBio:5431 ArrayExpress:P12074 Bgee:P12074
CleanEx:HS_COX6A1 Genevestigator:P12074 GermOnline:ENSG00000111775
Uniprot:P12074
Length = 109
Score = 101 (40.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 25/62 (40%), Positives = 36/62 (58%)
Query: 19 MKSSA-GNPDAVKLWRNLTYFGALPCCALVGVYVYLE-HQAEEEHHVRPEFVKREYLYIR 76
M S A G + ++W+ LT+F ALP A+ + VYL+ H E H RPEF+ +L IR
Sbjct: 24 MSSGAHGEEGSARMWKTLTFFVALPGVAVSMLNVYLKSHHGE---HERPEFIAYPHLRIR 80
Query: 77 NR 78
+
Sbjct: 81 TK 82
>UNIPROTKB|Q5T8I0 [details] [associations]
symbol:COX6A1P2 "Protein COX6A1P2" species:9606 "Homo
sapiens" [GO:0004129 "cytochrome-c oxidase activity" evidence=IEA]
[GO:0005751 "mitochondrial respiratory chain complex IV"
evidence=IEA] InterPro:IPR001349 InterPro:IPR018507 Pfam:PF02046
PIRSF:PIRSF000277 ProDom:PD006036 PROSITE:PS01329 GO:GO:0004129
GO:GO:0005751 HOGENOM:HOG000193965 Gene3D:4.10.95.10
PANTHER:PTHR11504 SUPFAM:SSF81411 HOVERGEN:HBG060482 EMBL:AL160264
IPI:IPI00176681 SMR:Q5T8I0 STRING:Q5T8I0 Ensembl:ENST00000423336
HGNC:HGNC:35239 OMA:CMANAYM Uniprot:Q5T8I0
Length = 109
Score = 101 (40.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 25/62 (40%), Positives = 36/62 (58%)
Query: 19 MKSSA-GNPDAVKLWRNLTYFGALPCCALVGVYVYLE-HQAEEEHHVRPEFVKREYLYIR 76
M S A G + ++W+ LT+F ALP A+ + VYL+ H E H RPEF+ +L IR
Sbjct: 24 MSSGAHGEEGSARMWKTLTFFVALPGVAVSMLNVYLKSHHGE---HERPEFIAYPHLRIR 80
Query: 77 NR 78
+
Sbjct: 81 TK 82
>MGI|MGI:103099 [details] [associations]
symbol:Cox6a1 "cytochrome c oxidase subunit VIa polypeptide
1" species:10090 "Mus musculus" [GO:0004129 "cytochrome-c oxidase
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0005751 "mitochondrial respiratory chain complex IV"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR001349
InterPro:IPR018507 Pfam:PF02046 PIRSF:PIRSF000277 ProDom:PD006036
PROSITE:PS01329 MGI:MGI:103099 GO:GO:0005739 GO:GO:0004129
GO:GO:0005751 eggNOG:NOG279259 KO:K02266 Gene3D:4.10.95.10
PANTHER:PTHR11504 SUPFAM:SSF81411 CTD:1337 HOVERGEN:HBG060482
OMA:NAYLKHQ OrthoDB:EOG4N04GG ChiTaRS:COX6A1 EMBL:L06465
EMBL:U08440 IPI:IPI00121443 RefSeq:NP_031774.1 UniGene:Mm.43415
ProteinModelPortal:P43024 SMR:P43024 IntAct:P43024 STRING:P43024
PhosphoSite:P43024 SWISS-2DPAGE:P43024 PaxDb:P43024 PRIDE:P43024
GeneID:12861 KEGG:mmu:12861 InParanoid:P43024 NextBio:282424
Bgee:P43024 CleanEx:MM_COX6A1 Genevestigator:P43024
GermOnline:ENSMUSG00000041697 Uniprot:P43024
Length = 111
Score = 98 (39.6 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 26/79 (32%), Positives = 41/79 (51%)
Query: 2 ASRLGQMMMRKFS--TSPAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEE 59
ASR+ + + R P + G + ++W+ LTYF ALP + + V+L+ + EE
Sbjct: 8 ASRVSRPLGRALPGLRRPMSSGAHGEEGSARMWKALTYFVALPGVGVSMLNVFLKSRHEE 67
Query: 60 EHHVRPEFVKREYLYIRNR 78
H RP FV +L IR +
Sbjct: 68 --HERPPFVAYPHLRIRTK 84
>UNIPROTKB|H0YIV9 [details] [associations]
symbol:H0YIV9 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0004129 "cytochrome-c oxidase activity" evidence=IEA]
[GO:0005751 "mitochondrial respiratory chain complex IV"
evidence=IEA] [GO:0006450 "regulation of translational fidelity"
evidence=IEA] HAMAP:MF_00122 InterPro:IPR001349 InterPro:IPR003837
Pfam:PF02046 Pfam:PF02686 ProDom:PD006036 GO:GO:0004129
GO:GO:0005751 Gene3D:4.10.95.10 SUPFAM:SSF81411 GO:GO:0006450
EMBL:AL021546 TIGRFAMs:TIGR00135 HGNC:HGNC:25068 ChiTaRS:GATC
Ensembl:ENST00000551806 Uniprot:H0YIV9
Length = 168
Score = 97 (39.2 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 22/56 (39%), Positives = 33/56 (58%)
Query: 24 GNPDAVKLWRNLTYFGALPCCALVGVYVYLE-HQAEEEHHVRPEFVKREYLYIRNR 78
G + ++W+ LT+F ALP A+ + VYL+ H E H RPEF+ +L IR +
Sbjct: 7 GEEGSARMWKTLTFFVALPGVAVSMLNVYLKSHHGE---HERPEFIAYPHLRIRTK 59
>UNIPROTKB|J9P8X9 [details] [associations]
symbol:LOC477508 "Cytochrome c oxidase subunit 6A,
mitochondrial" species:9615 "Canis lupus familiaris" [GO:0005751
"mitochondrial respiratory chain complex IV" evidence=IEA]
[GO:0004129 "cytochrome-c oxidase activity" evidence=IEA]
InterPro:IPR001349 InterPro:IPR018507 Pfam:PF02046 ProDom:PD006036
PROSITE:PS01329 GO:GO:0004129 GO:GO:0005751 Gene3D:4.10.95.10
PANTHER:PTHR11504 SUPFAM:SSF81411 GeneTree:ENSGT00390000002756
EMBL:AAEX03014735 Ensembl:ENSCAFT00000044210 Uniprot:J9P8X9
Length = 233
Score = 97 (39.2 bits), Expect = 0.00012, P = 0.00012
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 18 AMKSSA-GNPDAVKLWRNLTYFGALPCCALVGVYVYLE-HQAEEEHHVRPEFVKREYLYI 75
+M S A G + ++W+ LTYF ALP + + V+L+ H E H RPEF+ +L I
Sbjct: 147 SMSSGAHGEEGSARMWKALTYFVALPGVGVSMLNVFLKSHHGE---HERPEFIAYPHLRI 203
Query: 76 RNR 78
R++
Sbjct: 204 RSK 206
>UNIPROTKB|E1C3B2 [details] [associations]
symbol:COX6A1 "Cytochrome c oxidase subunit 6A,
mitochondrial" species:9031 "Gallus gallus" [GO:0004129
"cytochrome-c oxidase activity" evidence=IEA] [GO:0005751
"mitochondrial respiratory chain complex IV" evidence=IEA]
InterPro:IPR001349 InterPro:IPR018507 Pfam:PF02046
PIRSF:PIRSF000277 ProDom:PD006036 PROSITE:PS01329 GO:GO:0004129
GO:GO:0005751 KO:K02266 Gene3D:4.10.95.10 PANTHER:PTHR11504
SUPFAM:SSF81411 GeneTree:ENSGT00390000002756 CTD:1337 OMA:NAYLKHQ
EMBL:AADN02043204 IPI:IPI00583550 RefSeq:XP_415270.1 PRIDE:E1C3B2
Ensembl:ENSGALT00000011661 GeneID:416978 KEGG:gga:416978
NextBio:20820364 Uniprot:E1C3B2
Length = 108
Score = 88 (36.0 bits), Expect = 0.00035, P = 0.00035
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 21 SSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYIRNR 78
S+A +LW+ L++ ALP + + YL+ Q E H RPEF++ +L IR++
Sbjct: 26 SAAHEGGGARLWKTLSFVVALPAVGVCMLNCYLKAQHE---HERPEFIRYAHLRIRSK 80
>RGD|2385 [details] [associations]
symbol:Cox6a2 "cytochrome c oxidase subunit VIa polypeptide 2"
species:10116 "Rattus norvegicus" [GO:0004129 "cytochrome-c oxidase
activity" evidence=IEA;TAS] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0005751 "mitochondrial respiratory chain complex IV"
evidence=IEA] InterPro:IPR001349 InterPro:IPR018507 Pfam:PF02046
PIRSF:PIRSF000277 ProDom:PD006036 PROSITE:PS01329 RGD:2385
GO:GO:0004129 GO:GO:0005751 Gene3D:4.10.95.10 PANTHER:PTHR11504
SUPFAM:SSF81411 OrthoDB:EOG4N04GG eggNOG:NOG280964 EMBL:X12554
IPI:IPI00231504 PIR:S01157 UniGene:Rn.5119 ProteinModelPortal:P10817
SMR:P10817 STRING:P10817 PhosphoSite:P10817 UCSC:RGD:2385
InParanoid:P10817 NextBio:605987 Genevestigator:P10817
GermOnline:ENSRNOG00000019851 Uniprot:P10817
Length = 94
Score = 86 (35.3 bits), Expect = 0.00057, P = 0.00057
Identities = 24/65 (36%), Positives = 32/65 (49%)
Query: 14 STSPAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYL 73
S + A K G A WR LT+ ALP AL + ++ H HH RPEF+ +L
Sbjct: 8 SMASASKGDHGGAGA-NTWRLLTFVLALPSVALCSLNCWM-HAG---HHERPEFIPYHHL 62
Query: 74 YIRNR 78
IR +
Sbjct: 63 RIRTK 67
>UNIPROTKB|P10817 [details] [associations]
symbol:Cox6a2 "Cytochrome c oxidase subunit 6A2,
mitochondrial" species:10116 "Rattus norvegicus" [GO:0005751
"mitochondrial respiratory chain complex IV" evidence=IEA]
InterPro:IPR001349 InterPro:IPR018507 Pfam:PF02046
PIRSF:PIRSF000277 ProDom:PD006036 PROSITE:PS01329 RGD:2385
GO:GO:0004129 GO:GO:0005751 Gene3D:4.10.95.10 PANTHER:PTHR11504
SUPFAM:SSF81411 OrthoDB:EOG4N04GG eggNOG:NOG280964 EMBL:X12554
IPI:IPI00231504 PIR:S01157 UniGene:Rn.5119
ProteinModelPortal:P10817 SMR:P10817 STRING:P10817
PhosphoSite:P10817 UCSC:RGD:2385 InParanoid:P10817 NextBio:605987
Genevestigator:P10817 GermOnline:ENSRNOG00000019851 Uniprot:P10817
Length = 94
Score = 86 (35.3 bits), Expect = 0.00057, P = 0.00057
Identities = 24/65 (36%), Positives = 32/65 (49%)
Query: 14 STSPAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYL 73
S + A K G A WR LT+ ALP AL + ++ H HH RPEF+ +L
Sbjct: 8 SMASASKGDHGGAGA-NTWRLLTFVLALPSVALCSLNCWM-HAG---HHERPEFIPYHHL 62
Query: 74 YIRNR 78
IR +
Sbjct: 63 RIRTK 67
>WB|WBGene00006519 [details] [associations]
symbol:tag-174 species:6239 "Caenorhabditis elegans"
[GO:0004129 "cytochrome-c oxidase activity" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0005751 "mitochondrial respiratory chain complex IV"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0008340 "determination
of adult lifespan" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR001349 InterPro:IPR018507 Pfam:PF02046
PIRSF:PIRSF000277 ProDom:PD006036 PROSITE:PS01329 GO:GO:0005739
GO:GO:0008340 GO:GO:0040010 GO:GO:0000003 GO:GO:0004129
EMBL:FO080874 GO:GO:0005751 eggNOG:NOG279259 HOGENOM:HOG000193965
KO:K02266 Gene3D:4.10.95.10 PANTHER:PTHR11504 SUPFAM:SSF81411
GeneTree:ENSGT00390000002756 PIR:E88449 RefSeq:NP_498082.1
ProteinModelPortal:Q20779 SMR:Q20779 MINT:MINT-3386538
STRING:Q20779 PaxDb:Q20779 EnsemblMetazoa:F54D8.2.1
EnsemblMetazoa:F54D8.2.2 EnsemblMetazoa:F54D8.2.3
EnsemblMetazoa:F54D8.2.4 EnsemblMetazoa:F54D8.2.5
EnsemblMetazoa:F54D8.2.6 EnsemblMetazoa:F54D8.2.7 GeneID:175693
KEGG:cel:CELE_F54D8.2 UCSC:F54D8.2.1 CTD:175693 WormBase:F54D8.2
InParanoid:Q20779 OMA:CLALTMY NextBio:889244 Uniprot:Q20779
Length = 128
Score = 86 (35.3 bits), Expect = 0.00057, P = 0.00057
Identities = 15/52 (28%), Positives = 29/52 (55%)
Query: 27 DAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYIRNR 78
+A + W+ + + ++PC AL + +H+ H RPE V+ +L +RN+
Sbjct: 46 NASETWKKIFFIASIPCLALTMYAAFKDHKKHMSHE-RPEHVEYAFLNVRNK 96
>UNIPROTKB|J9NWS5 [details] [associations]
symbol:LOC100686830 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005751 "mitochondrial respiratory
chain complex IV" evidence=IEA] [GO:0004129 "cytochrome-c oxidase
activity" evidence=IEA] InterPro:IPR001349 Pfam:PF02046
PIRSF:PIRSF000277 ProDom:PD006036 GO:GO:0004129 GO:GO:0005751
Gene3D:4.10.95.10 PANTHER:PTHR11504 SUPFAM:SSF81411
GeneTree:ENSGT00390000002756 OMA:NAYLKHQ EMBL:AAEX03002577
Ensembl:ENSCAFT00000043111 Uniprot:J9NWS5
Length = 114
Score = 85 (35.0 bits), Expect = 0.00073, P = 0.00072
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 24 GNPDAVKLWRNLTYFGALPCCALVGVYVYLE-HQAEEEHHVRPEFVKREYLYIRN 77
G + + W+ LTYF ALP + + +L+ H E H RPEF+ +L+IR+
Sbjct: 35 GEEGSARTWKALTYFVALPSVGVSMLNRFLKLHHRE---HKRPEFIAYPHLHIRS 86
>MGI|MGI:104649 [details] [associations]
symbol:Cox6a2 "cytochrome c oxidase subunit VIa polypeptide
2" species:10090 "Mus musculus" [GO:0004129 "cytochrome-c oxidase
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0005751 "mitochondrial respiratory chain complex IV"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR001349
InterPro:IPR018507 Pfam:PF02046 PIRSF:PIRSF000277 ProDom:PD006036
PROSITE:PS01329 MGI:MGI:104649 GO:GO:0005739 GO:GO:0004129
GO:GO:0005751 HOGENOM:HOG000193965 KO:K02266 Gene3D:4.10.95.10
PANTHER:PTHR11504 SUPFAM:SSF81411 GeneTree:ENSGT00390000002756
HOVERGEN:HBG060482 OrthoDB:EOG4N04GG CTD:1339 eggNOG:NOG280964
OMA:CTLNSWL EMBL:U08439 EMBL:U34801 EMBL:U63716 EMBL:AK002506
IPI:IPI00320238 PIR:I49360 RefSeq:NP_034073.2 UniGene:Mm.43824
ProteinModelPortal:P43023 SMR:P43023 STRING:P43023
PhosphoSite:P43023 PaxDb:P43023 PRIDE:P43023
Ensembl:ENSMUST00000033049 GeneID:12862 KEGG:mmu:12862
UCSC:uc009jyi.1 InParanoid:P43023 NextBio:282428 Bgee:P43023
CleanEx:MM_COX6A2 Genevestigator:P43023
GermOnline:ENSMUSG00000030785 Uniprot:P43023
Length = 97
Score = 84 (34.6 bits), Expect = 0.00093, P = 0.00093
Identities = 24/65 (36%), Positives = 32/65 (49%)
Query: 14 STSPAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYL 73
S + A K G A WR LT+ ALP AL + ++ H HH RPEF+ +L
Sbjct: 11 SMASAAKGDHGGAGA-NTWRLLTFVLALPGVALCSLNCWM-HAG---HHERPEFIPYHHL 65
Query: 74 YIRNR 78
IR +
Sbjct: 66 RIRTK 70
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.134 0.416 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 79 79 0.00091 102 3 11 22 0.50 28
29 0.39 30
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 17
No. of states in DFA: 561 (60 KB)
Total size of DFA: 109 KB (2073 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:04
No. of threads or processors used: 24
Search cpu time: 9.96u 0.06s 10.02t Elapsed: 00:00:20
Total cpu time: 9.96u 0.06s 10.02t Elapsed: 00:00:24
Start: Thu Aug 15 14:18:18 2013 End: Thu Aug 15 14:18:42 2013