BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11080
(90 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O44390|ACO11_TRINI Acyl-CoA Delta(11) desaturase OS=Trichoplusia ni GN=D11DS PE=1 SV=2
Length = 349
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 54/89 (60%), Positives = 66/89 (74%)
Query: 2 GWHNYHHVFPWDYKTSELGTYGTNFTTAFIDFFARIGWAYDLKTVSSDMVRTRAQRTGDG 61
G+HNYHHVFPWDY+T+ELG N TT FIDF A GWAYDLK+VS D+++ RA+RTGDG
Sbjct: 261 GFHNYHHVFPWDYRTAELGNNFLNLTTLFIDFCAWFGWAYDLKSVSEDIIKQRAKRTGDG 320
Query: 62 SHGDVWGWGDKDMSAEDKQDATVVHPKSE 90
S G +WGW DKDM + K A + + K E
Sbjct: 321 SSGVIWGWDDKDMDRDIKSKANIFYAKKE 349
>sp|Q6US81|ACO11_SPOLI Acyl-CoA Delta(11) desaturase OS=Spodoptera littoralis PE=1 SV=1
Length = 338
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
Query: 2 GWHNYHHVFPWDYKTSELGTYGTNFTTAFIDFFARIGWAYDLKTVSSDMVRTRAQRTGDG 61
G+HNYHHVFPWDY+ +ELG NF T FIDFFA IGWAYDLKTVS +M++ R++RTGDG
Sbjct: 258 GFHNYHHVFPWDYRAAELGNNSLNFPTKFIDFFAWIGWAYDLKTVSKEMIKQRSKRTGDG 317
Query: 62 SHGDVWGWGDKDMSAEDKQD 81
+ ++WG D D + ED ++
Sbjct: 318 T--NLWGLEDVD-TPEDLKN 334
>sp|Q8ISS3|ACO11_CHORO Acyl-CoA Delta(11) desaturase OS=Choristoneura rosaceana PE=1 SV=1
Length = 335
Score = 94.4 bits (233), Expect = 2e-19, Method: Composition-based stats.
Identities = 40/60 (66%), Positives = 49/60 (81%)
Query: 3 WHNYHHVFPWDYKTSELGTYGTNFTTAFIDFFARIGWAYDLKTVSSDMVRTRAQRTGDGS 62
+HNYHHVFPWDY+ SELG G N+T FIDFFA IGWAYDLKT S + +++R +RTGDG+
Sbjct: 260 FHNYHHVFPWDYRASELGNIGMNWTAKFIDFFAWIGWAYDLKTASDENIKSRMKRTGDGT 319
>sp|P13516|ACOD1_MOUSE Acyl-CoA desaturase 1 OS=Mus musculus GN=Scd1 PE=1 SV=2
Length = 355
Score = 72.4 bits (176), Expect = 8e-13, Method: Composition-based stats.
Identities = 36/62 (58%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 2 GWHNYHHVFPWDYKTSELGTYGTNFTTAFIDFFARIGWAYDLKTVSSDMVRTRAQRTGDG 61
G+HNYHH FP+DY SE + NFTT FID A +G AYD K VS V R +RTGDG
Sbjct: 292 GFHNYHHTFPFDYSASEY-RWHINFTTFFIDCMAALGLAYDRKKVSKATVLARIKRTGDG 350
Query: 62 SH 63
SH
Sbjct: 351 SH 352
>sp|P07308|ACOD1_RAT Acyl-CoA desaturase 1 OS=Rattus norvegicus GN=Scd1 PE=2 SV=2
Length = 358
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 36/62 (58%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 2 GWHNYHHVFPWDYKTSELGTYGTNFTTAFIDFFARIGWAYDLKTVSSDMVRTRAQRTGDG 61
G+HNYHH FP+DY SE + NFTT FID A +G AYD K VS V R +RTGDG
Sbjct: 295 GFHNYHHAFPYDYSASEY-RWHINFTTFFIDCMAALGLAYDRKKVSKAAVLARIKRTGDG 353
Query: 62 SH 63
SH
Sbjct: 354 SH 355
>sp|Q92038|ACOD_CYPCA Acyl-CoA desaturase OS=Cyprinus carpio PE=2 SV=2
Length = 327
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 39/62 (62%)
Query: 2 GWHNYHHVFPWDYKTSELGTYGTNFTTAFIDFFARIGWAYDLKTVSSDMVRTRAQRTGDG 61
G+HNYHH FP+DY TSE G T FID +G A + K VS + V RAQRTGDG
Sbjct: 263 GFHNYHHTFPFDYATSEFGCKLNLTTCCFIDLMCFLGLAREPKRVSREAVLARAQRTGDG 322
Query: 62 SH 63
SH
Sbjct: 323 SH 324
>sp|Q64420|ACOD_MESAU Acyl-CoA desaturase OS=Mesocricetus auratus GN=SCD PE=2 SV=1
Length = 354
Score = 69.7 bits (169), Expect = 5e-12, Method: Composition-based stats.
Identities = 35/61 (57%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 2 GWHNYHHVFPWDYKTSELGTYGTNFTTAFIDFFARIGWAYDLKTVSSDMVRTRAQRTGDG 61
G+HNYHH FP+DY SE + NFTT FID A +G AYD K VS V R +RTGDG
Sbjct: 291 GFHNYHHAFPYDYSASEY-RWHINFTTFFIDCMAALGLAYDRKKVSKAAVLARIKRTGDG 349
Query: 62 S 62
S
Sbjct: 350 S 350
>sp|P13011|ACOD2_MOUSE Acyl-CoA desaturase 2 OS=Mus musculus GN=Scd2 PE=2 SV=2
Length = 358
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 2 GWHNYHHVFPWDYKTSELGTYGTNFTTAFIDFFARIGWAYDLKTVSSDMVRTRAQRTGDG 61
G+HNYHH FP+DY SE + NFTT FID A +G AYD K VS V R +RTGDG
Sbjct: 295 GFHNYHHAFPYDYSASEY-RWHINFTTFFIDCMALLGLAYDRKRVSRAAVLARIKRTGDG 353
Query: 62 S 62
S
Sbjct: 354 S 354
>sp|O00767|ACOD_HUMAN Acyl-CoA desaturase OS=Homo sapiens GN=SCD PE=1 SV=2
Length = 359
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 2 GWHNYHHVFPWDYKTSELGTYGTNFTTAFIDFFARIGWAYDLKTVSSDMVRTRAQRTGDG 61
G+HNYHH FP+DY SE + NFTT FID A +G AYD K VS + R +RTGDG
Sbjct: 296 GFHNYHHSFPYDYSASEY-RWHINFTTFFIDCMAALGLAYDRKKVSKAAILARIKRTGDG 354
Query: 62 SH 63
++
Sbjct: 355 NY 356
>sp|O62849|ACOD_SHEEP Acyl-CoA desaturase OS=Ovis aries GN=SCD PE=2 SV=1
Length = 359
Score = 65.9 bits (159), Expect = 7e-11, Method: Composition-based stats.
Identities = 34/62 (54%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 2 GWHNYHHVFPWDYKTSELGTYGTNFTTAFIDFFARIGWAYDLKTVSSDMVRTRAQRTGDG 61
G+HNYHH FP+DY SE + NFTT FID A IG AYD K VS V R +RTG+
Sbjct: 296 GFHNYHHTFPYDYSASEY-RWHINFTTFFIDCMAAIGLAYDRKKVSKAAVLGRMKRTGEE 354
Query: 62 SH 63
S+
Sbjct: 355 SY 356
>sp|Q9TT94|ACOD_BOVIN Acyl-CoA desaturase OS=Bos taurus GN=SCD PE=2 SV=2
Length = 359
Score = 65.5 bits (158), Expect = 9e-11, Method: Composition-based stats.
Identities = 33/62 (53%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 2 GWHNYHHVFPWDYKTSELGTYGTNFTTAFIDFFARIGWAYDLKTVSSDMVRTRAQRTGDG 61
G+HNYHH FP+DY SE + NFTT FID A IG AYD K VS + R +RTG+
Sbjct: 296 GFHNYHHTFPYDYSASEY-RWHINFTTFFIDCMAAIGLAYDRKKVSKAAILARIKRTGEE 354
Query: 62 SH 63
S+
Sbjct: 355 SY 356
>sp|Q6P7B9|ACOD2_RAT Acyl-CoA desaturase 2 OS=Rattus norvegicus GN=Scd2 PE=2 SV=1
Length = 358
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 2 GWHNYHHVFPWDYKTSELGTYGTNFTTAFIDFFARIGWAYDLKTVSSDMVRTRAQRTGDG 61
G+HNYHH FP+DY SE + NFTT FID A +G AYD K VS V R +RTG+
Sbjct: 295 GFHNYHHAFPYDYSASEY-RWHINFTTFFIDCMALLGLAYDRKRVSKAAVLARIKRTGEE 353
Query: 62 S 62
S
Sbjct: 354 S 354
>sp|Q95MI7|ACOD_CAPHI Acyl-CoA desaturase OS=Capra hircus GN=SCD PE=2 SV=1
Length = 359
Score = 64.3 bits (155), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/61 (54%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 2 GWHNYHHVFPWDYKTSELGTYGTNFTTAFIDFFARIGWAYDLKTVSSDMVRTRAQRTGDG 61
G+HNYHH FP+DY SE + NFTT FID A IG AYD K VS R +RTG+
Sbjct: 296 GFHNYHHTFPYDYSASEY-RWHINFTTFFIDCMAAIGLAYDRKKVSKAAALARMKRTGEE 354
Query: 62 S 62
S
Sbjct: 355 S 355
>sp|Q2KIA4|SCD5_BOVIN Stearoyl-CoA desaturase 5 OS=Bos taurus GN=SCD5 PE=2 SV=1
Length = 335
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 2 GWHNYHHVFPWDYKTSELGTYGTNFTTAFIDFFARIGWAYDLKTVSSDMVRTRAQRTGDG 61
G+HNYHH FP+DY SE G N TT FIDF +G A D K + M+ R RTGDG
Sbjct: 275 GFHNYHHTFPFDYSASEFGL-NFNPTTWFIDFMCWLGLATDRKRATKQMIEARKARTGDG 333
Query: 62 S 62
S
Sbjct: 334 S 334
>sp|Q86SK9|SCD5_HUMAN Stearoyl-CoA desaturase 5 OS=Homo sapiens GN=SCD5 PE=2 SV=2
Length = 330
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/61 (50%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 2 GWHNYHHVFPWDYKTSELGTYGTNFTTAFIDFFARIGWAYDLKTVSSDMVRTRAQRTGDG 61
G+HNYHH FP+DY SE G N TT FIDF +G A D K + M+ R RTGD
Sbjct: 270 GFHNYHHTFPFDYSASEFG-LNFNPTTWFIDFMCWLGLATDRKRATKPMIEARKARTGDS 328
Query: 62 S 62
S
Sbjct: 329 S 329
>sp|O02858|ACOD_PIG Acyl-CoA desaturase (Fragment) OS=Sus scrofa GN=SCD PE=2 SV=1
Length = 334
Score = 53.1 bits (126), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/46 (56%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 2 GWHNYHHVFPWDYKTSELGTYGTNFTTAFIDFFARIGWAYDLKTVS 47
G+HNYHH FP+DY SE + N TT FID A +G AYD K VS
Sbjct: 285 GFHNYHHTFPYDYSASEY-RWHINLTTFFIDCMAALGLAYDRKKVS 329
>sp|P21147|ACO1_YEAST Acyl-CoA desaturase 1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=OLE1 PE=1 SV=2
Length = 510
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Query: 2 GWHNYHHVFPWDYKTSELGTYGTNFTTAFIDFFARIGWAYDLKTVSSD-----MVRTRAQ 56
G+HN+HH FP DY+ + + Y + T I + +G AYDLK S + +++ +
Sbjct: 333 GYHNFHHEFPTDYRNA-IKWYQYDPTKVIIYLTSLVGLAYDLKKFSQNAIEEALIQQEQK 391
Query: 57 RTGDGSHGDVWGWGDKDMSAEDKQ 80
+ WG D+ DKQ
Sbjct: 392 KINKKKAKINWGPVLTDLPMWDKQ 415
>sp|O94523|ACO1_SCHPO Probable acyl-CoA desaturase OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPCC1281.06c PE=3 SV=1
Length = 479
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 2 GWHNYHHVFPWDYKTSELGTYGTNFTTAFIDFFARIGWAYDLKTVSSDMVR 52
G HNYHH FP DY+ L Y + T FI + G AY+L T + ++
Sbjct: 282 GNHNYHHAFPNDYRNG-LRWYEYDPTKIFIYIASLFGLAYNLNTFPDNEIQ 331
>sp|Q12618|ACO1_AJECA Acyl-CoA desaturase OS=Ajellomyces capsulatus GN=OLE1 PE=3 SV=1
Length = 476
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Query: 2 GWHNYHHVFPWDYKTS-ELGTYGTNFTTAFIDFFARIGWAYDLKTVSSDMV-RTRAQR 57
G+HN+HH FP DY+ + E Y T +I + ++G AYDLK ++ + + R Q+
Sbjct: 273 GYHNFHHEFPSDYRNAIEWHQYDPTKWTIWI--WKQLGLAYDLKQFRANEIEKGRVQQ 328
>sp|Q0W0J2|HIS7_UNCMA Imidazoleglycerol-phosphate dehydratase OS=Uncultured methanogenic
archaeon RC-I GN=hisB PE=3 SV=1
Length = 192
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 9 VFPWDYKTSELGTYGTNFTTAFIDFFAR 36
VF D++ ++G Y T T FID FAR
Sbjct: 116 VFKADFRQPKIGDYSTAMTRHFIDSFAR 143
>sp|O34722|YFMG_BACSU Uncharacterized protein YfmG OS=Bacillus subtilis (strain 168)
GN=yfmG PE=4 SV=1
Length = 487
Score = 30.0 bits (66), Expect = 4.7, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Query: 22 YGTNFTTAFIDFFARIGWA-YDLKTVSSDMVRTRAQRTGDGSHGDVWGWGDK 72
Y N IDF+ +A Y K + ++ +A R G G+VW WGDK
Sbjct: 290 YLDNHPVTGIDFYDAFAYARYKGKELPTEFQWEKAAR---GEKGNVWPWGDK 338
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.454
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,819,298
Number of Sequences: 539616
Number of extensions: 1165802
Number of successful extensions: 2177
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 2145
Number of HSP's gapped (non-prelim): 24
length of query: 90
length of database: 191,569,459
effective HSP length: 60
effective length of query: 30
effective length of database: 159,192,499
effective search space: 4775774970
effective search space used: 4775774970
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)