BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1109
(79 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|110671416|gb|ABG81959.1| putative mitochondrial cytochrome oxidase subunit VIa [Diaphorina
citri]
Length = 105
Score = 164 bits (415), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 77/78 (98%), Positives = 78/78 (100%)
Query: 1 MASRLGQMMMRKFSTSPAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEE 60
MASRLGQMMMRKFSTSPAMKS+AGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEE
Sbjct: 1 MASRLGQMMMRKFSTSPAMKSAAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEE 60
Query: 61 HHVRPEFVKREYLYIRNR 78
HHVRPEFVKREYLYIRNR
Sbjct: 61 HHVRPEFVKREYLYIRNR 78
>gi|442753217|gb|JAA68768.1| Putative cytochrome c oxidase subunit via/cox13 [Ixodes ricinus]
Length = 111
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 1 MASRLGQMMMRKFSTSP---AMKSSAGNPD--AVKLWRNLTYFGALPCCALVGVYVYLEH 55
MAS +R FS+S A AGN A K+WRNLT+F A P L + YL
Sbjct: 1 MASMNFAQFLRYFSSSAIRYAKPGEAGNAHLAAQKMWRNLTFFVAFPAIGLCALNAYLAE 60
Query: 56 QAEEEHHVRPEFVKREYLYIRNR 78
Q +H RPEF K EYLYIR +
Sbjct: 61 QEHHKHFHRPEFKKYEYLYIRTK 83
>gi|158296406|ref|XP_316821.4| AGAP000851-PA [Anopheles gambiae str. PEST]
gi|157015281|gb|EAA12143.4| AGAP000851-PA [Anopheles gambiae str. PEST]
Length = 110
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 3 SRLGQMMMRKFSTSPAMKSSAGNPDAV--------KLWRNLTYFGALPCCALVGVYVYLE 54
S + ++ R S S + G P AV K+W+ L++F A+P L + YL+
Sbjct: 2 SLVSHILRRSISQSIVRNAEVGGPSAVAGHEAGGYKVWKKLSFFVAVPAVGLCMLNAYLK 61
Query: 55 HQAEEEHHVRPEFVKREYLYIRNR 78
HQ EE H RPEFVK E+L IRN+
Sbjct: 62 HQ-EEHGHPRPEFVKYEHLRIRNK 84
>gi|242002136|ref|XP_002435711.1| cytochrome C oxidase, subunit VIa/COX13, putative [Ixodes
scapularis]
gi|215499047|gb|EEC08541.1| cytochrome C oxidase, subunit VIa/COX13, putative [Ixodes
scapularis]
Length = 111
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 1 MASRLGQMMMRKFSTSP---AMKSSAGNPD--AVKLWRNLTYFGALPCCALVGVYVYLEH 55
MAS +R FS+S A AG+ A K+WRNLT+F A P L + YL
Sbjct: 1 MASMNFAQFLRYFSSSAIRYAKPGEAGSAHLAAQKMWRNLTFFVAFPAIGLCALNAYLAE 60
Query: 56 QAEEEHHVRPEFVKREYLYIRNR 78
+ +H RPEF K EYLYIR +
Sbjct: 61 KEHHKHFHRPEFKKYEYLYIRTK 83
>gi|321471482|gb|EFX82455.1| hypothetical protein DAPPUDRAFT_302522 [Daphnia pulex]
Length = 111
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 1 MASRLGQMMMRKFSTSPAMKSSA---GNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQA 57
MA+ LG+++ R +T+ A G+ D K+WRNLT+ ALP AL + VYL
Sbjct: 1 MATVLGKVISRGIATTRVANGQAAVSGHHDGWKIWRNLTFLVALPGVALCMLNVYLG-LD 59
Query: 58 EEEHHVRPEFVKREYLYIRNR 78
+ E H P FV EY+ IRN+
Sbjct: 60 DVEAHSAPPFVPYEYMRIRNK 80
>gi|221102584|ref|XP_002153881.1| PREDICTED: cytochrome c oxidase subunit 6A1, mitochondrial-like
[Hydra magnipapillata]
Length = 120
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 18 AMKSSAGNPDAV-KLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYIR 76
AM S + +A KLW+ LT FGALP ALVG +V E H RPEF+ +L IR
Sbjct: 34 AMASEIAHAEATAKLWKRLTLFGALPLIALVGYHVMTTEAEHEAHFHRPEFIPYSHLRIR 93
Query: 77 NR 78
N+
Sbjct: 94 NK 95
>gi|91088963|ref|XP_974027.1| PREDICTED: similar to CG17280 CG17280-PA [Tribolium castaneum]
gi|270012806|gb|EFA09254.1| hypothetical protein TcasGA2_TC006519 [Tribolium castaneum]
Length = 112
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 22 SAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYIRNR 78
S G+ K+WRN+T+F A P AL V YL H + HH RP FVK EYL IR +
Sbjct: 30 SGGHEGGYKVWRNMTFFVAFPAIALCAVNCYLAHYS--GHHERPPFVKYEYLRIRTK 84
>gi|391344497|ref|XP_003746534.1| PREDICTED: cytochrome c oxidase subunit 6A1, mitochondrial-like
[Metaseiulus occidentalis]
Length = 102
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 1 MASRLGQMMMRKFSTSPAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEE 60
MAS LG++ R ST A+K + A LW+ L+ F ALP +VG+ YL +
Sbjct: 1 MASILGRVARRFAST--AVKDHQDHEAAALLWKRLSLFVALPAVVIVGINTYLHELEHHK 58
Query: 61 HHVRPEFVKREYLYIRNR 78
H RPEF+ E+L I N+
Sbjct: 59 HEQRPEFIPCEHLGIINK 76
>gi|118791154|ref|XP_319592.3| AGAP008850-PA [Anopheles gambiae str. PEST]
gi|116117463|gb|EAA15129.3| AGAP008850-PA [Anopheles gambiae str. PEST]
Length = 86
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 17 PAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYIR 76
PA SS G K W+ +T+ A+P L+ + Y EHQ E H RP+F++ EYL IR
Sbjct: 3 PAPSSSRG----YKFWKKITFMVAMPLVGLIALNTYTEHQKEHAHRSRPKFIEYEYLRIR 58
Query: 77 NR 78
+
Sbjct: 59 TK 60
>gi|239789640|dbj|BAH71432.1| ACYPI23643 [Acyrthosiphon pisum]
Length = 118
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Query: 2 ASRLGQMMMRKFSTSPAMKSSAGNPDAVK---LWRNLTYFGALPCCALVGVYVYLEHQAE 58
A R + +M + T+ +KS + +P+ ++ LW+ +TYF LP C L +Y H
Sbjct: 12 AGRQLRAIMDEQFTADKLKSHS-SPEVLQGLSLWKKVTYFIGLPGCLLASIYCINGHLEH 70
Query: 59 EEHHVRPEFVKREYLYIRNR 78
E+H RPEFV E+L IR R
Sbjct: 71 EKHSSRPEFVPYEHLRIRTR 90
>gi|307207908|gb|EFN85469.1| Cytochrome c oxidase polypeptide 6A1, mitochondrial [Harpegnathos
saltator]
Length = 104
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 2/77 (2%)
Query: 3 SRLGQMMMRKFSTSPAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHH 62
+R+ + RK+S S + + S + +A LW+ L++F A P L + YL HQA H
Sbjct: 5 TRVVRTFTRKYS-SASTEGSTHSKNAEILWKRLSFFVAFPAIGLAMLNSYLNHQA-HHHD 62
Query: 63 VRPEFVKREYLYIRNRN 79
RPEF+ ++L IRN++
Sbjct: 63 ERPEFIPYDHLRIRNKS 79
>gi|346466541|gb|AEO33115.1| hypothetical protein [Amblyomma maculatum]
Length = 129
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 9 MMRKFSTSPAMKSSAGNPDA----VKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVR 64
+ R FS S + G + +LW+ LTYF A P AL G+ VYL + +H+ R
Sbjct: 30 VFRNFSKSAVRFAEHGGEQSHEAGEQLWKRLTYFVAFPAIALCGINVYLAEKEHAKHYHR 89
Query: 65 PEFVKREYLYIRNR 78
PE+ EYL++R++
Sbjct: 90 PEYRPYEYLHVRSK 103
>gi|157135376|ref|XP_001656628.1| cytochrome c oxidase, subunit VIA, putative [Aedes aegypti]
gi|94468508|gb|ABF18103.1| cytochrome c oxidase subunit VIa/COX13 [Aedes aegypti]
gi|108881257|gb|EAT45482.1| AAEL003234-PA [Aedes aegypti]
Length = 109
Score = 51.6 bits (122), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 45/84 (53%), Gaps = 10/84 (11%)
Query: 3 SRLGQMMMRKFSTSPAMKSSAGNPDAV--------KLWRNLTYFGALPCCALVGVYVYLE 54
S + +++R S S A + G P AV K W+ L++F ALP L + YL+
Sbjct: 2 SLVNHVLLRAISQSAARNAVTG-PSAVAGHGGGGYKTWKKLSFFVALPAVGLCMLNAYLK 60
Query: 55 HQAEEEHHVRPEFVKREYLYIRNR 78
HQ E H RPEF+ E++ IRN+
Sbjct: 61 HQ-EHHGHPRPEFIPYEHMRIRNK 83
>gi|195121986|ref|XP_002005493.1| GI20495 [Drosophila mojavensis]
gi|193910561|gb|EDW09428.1| GI20495 [Drosophila mojavensis]
Length = 109
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 4 RLGQMMMRKFSTSPAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHV 63
++G + R S + A+ + K+W+ L++F A+P L + YL+HQ EE H
Sbjct: 12 QIGVIAARNMSGTAAVAGE--HSGGYKVWKRLSFFVAMPAVGLCMLNAYLKHQ-EEHDHP 68
Query: 64 RPEFVKREYLYIRNR 78
RPEFVK EYL R +
Sbjct: 69 RPEFVKYEYLRRREK 83
>gi|167859902|gb|ACA04896.1| cytochrome c oxidase subunit VI [Microplitis mediator]
Length = 123
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 47/85 (55%), Gaps = 7/85 (8%)
Query: 1 MASRL---GQMMMRKFSTSPAMKSSAGNPDAV----KLWRNLTYFGALPCCALVGVYVYL 53
MAS+L G+++ R + T + P V KLW+NLT+F ALP L + Y+
Sbjct: 4 MASKLAFAGRVLARNYVTDMSFVPGYHRPKNVEKSCKLWKNLTFFVALPSVLLGMINSYM 63
Query: 54 EHQAEEEHHVRPEFVKREYLYIRNR 78
+ EEE RPE++ +++YI N+
Sbjct: 64 LTKEEEETIQRPEYIPYDHMYIMNK 88
>gi|260908362|gb|ACX53902.1| cytochrome c oxidase subunit VIa/COX13 [Rhipicephalus sanguineus]
Length = 108
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 1 MASRLGQMMMRKFSTSPAMKSSAGNPDAVK----LWRNLTYFGALPCCALVGVYVYLEHQ 56
MAS Q R FS S A S G+ + LW+ L+ F A P AL G+ VYL
Sbjct: 1 MASLTLQQAFRNFSKSAARFSRHGDAHSHAAGELLWKRLSIFVAFPAXALCGINVYLAEV 60
Query: 57 AEEEHHVRPEFVKREYLYIRNR 78
+H RPE+ EY++IR +
Sbjct: 61 EHMKHSHRPEYHPYEYIHIRTK 82
>gi|298160948|ref|NP_001177150.1| cytochrome c oxidase subunit VIa polypeptide 1 [Sus scrofa]
Length = 109
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 8/76 (10%)
Query: 4 RLGQMMMRKFSTSPAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLE-HQAEEEHH 62
R Q+ +R+ P S+ G + ++W+ LTYF ALP + + V+L+ H AEEE
Sbjct: 14 RRSQLQLRR----PMSSSAHGEEGSARMWKTLTYFVALPGVGVSMLNVFLKSHHAEEE-- 67
Query: 63 VRPEFVKREYLYIRNR 78
RPEFV +L IR++
Sbjct: 68 -RPEFVPYPHLRIRSK 82
>gi|387015402|gb|AFJ49820.1| Cytochrome c oxidase subunit 6A1, mitochondrial-like [Crotalus
adamanteus]
Length = 106
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 4 RLGQMMMRKFSTSPAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHV 63
R G R ST+ A + G A ++W+ L++ ALP AL + YL+ +E+HH
Sbjct: 12 RAGPGWKRALSTAAAEEKHHG---ADRIWKILSFVVALPAVALCQLNCYLK---KEKHHE 65
Query: 64 RPEFVKREYLYIRNR 78
RPEF+ ++LYIR +
Sbjct: 66 RPEFIPYKHLYIRTK 80
>gi|146746652|gb|ABQ43785.1| mitochondrial cytochrome c oxidase subunit VIa [Bombyx mori]
Length = 108
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 31 LWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYIRNR 78
LW+ +++F A P AL + YL HQ EEHH RP FV EY+ IR +
Sbjct: 35 LWKRMSFFVAFPAIALGMLNAYLAHQ--EEHHERPPFVPYEYMRIRTK 80
>gi|283046818|ref|NP_001164354.1| cytochrome c oxidase subunit 6A1, mitochondrial precursor
[Oryctolagus cuniculus]
gi|14194538|sp|Q9TTT7.1|CX6A1_RABIT RecName: Full=Cytochrome c oxidase subunit 6A1, mitochondrial;
AltName: Full=Cytochrome c oxidase polypeptide
VIa-liver; Flags: Precursor
gi|6467962|gb|AAF13255.1|AF198089_1 cytochrome oxidase subunit VIa [Oryctolagus cuniculus]
Length = 109
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 3 SRLGQMMMR-KFSTSPAMKSSA-GNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEE 60
SR+ Q++ R + M S A G + ++W+ LTYF ALP + + VYL+ EE
Sbjct: 7 SRVSQLLGRSRLQVGRPMSSGAHGEEGSARMWKALTYFVALPGVGVSMLNVYLKSHHEE- 65
Query: 61 HHVRPEFVKREYLYIRNR 78
H RPEF+ +L IR++
Sbjct: 66 -HERPEFIAYPHLRIRSK 82
>gi|332016579|gb|EGI57460.1| Cytochrome c oxidase subunit 6A1, mitochondrial [Acromyrmex
echinatior]
Length = 107
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 3 SRLGQMMMRKFSTS-PAMKSSAGNPDAVKL-WRNLTYFGALPCCALVGVYVYLEHQAEEE 60
++ + RK+ST+ P + G + +L W+ L+YF P AL + YL HQA +
Sbjct: 5 TKFARSFSRKYSTAAPKFGGTHGVTEQTQLLWKRLSYFVGFPAIALAMLNCYLNHQAHHD 64
Query: 61 HHVRPEFVKREYLYIRNR 78
RPEFV E+L +R +
Sbjct: 65 DE-RPEFVAYEHLRMRTK 81
>gi|125809378|ref|XP_001361094.1| GA14437 [Drosophila pseudoobscura pseudoobscura]
gi|195154665|ref|XP_002018242.1| GL16869 [Drosophila persimilis]
gi|54636267|gb|EAL25670.1| GA14437 [Drosophila pseudoobscura pseudoobscura]
gi|194114038|gb|EDW36081.1| GL16869 [Drosophila persimilis]
Length = 109
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 7/84 (8%)
Query: 1 MASRLGQMMMRKFSTSPA--MKSSAG----NPDAVKLWRNLTYFGALPCCALVGVYVYLE 54
M++ L + R+F + A M +A + K+W+ L++F A+P L + YL+
Sbjct: 1 MSAILNHAIRRQFGATAARNMSGTAAVAGEHSGGYKVWKRLSFFVAVPAVGLCMLNAYLK 60
Query: 55 HQAEEEHHVRPEFVKREYLYIRNR 78
HQ EE H R EFVK +YL R +
Sbjct: 61 HQ-EEHDHPRQEFVKYDYLRRREK 83
>gi|195026046|ref|XP_001986169.1| GH21206 [Drosophila grimshawi]
gi|193902169|gb|EDW01036.1| GH21206 [Drosophila grimshawi]
Length = 109
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 4 RLGQMMMRKFSTSPAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHV 63
++G R S + A+ + K+W+ L++F A+P L + YL+HQ EE H
Sbjct: 12 QIGTTAARNMSGTAAVAGE--HSGGYKVWKRLSFFVAVPAVGLCMLNAYLKHQ-EEHGHP 68
Query: 64 RPEFVKREYLYIRNR 78
R EFVK EYL R +
Sbjct: 69 RQEFVKYEYLRRREK 83
>gi|77736544|ref|NP_036946.1| cytochrome c oxidase subunit 6A1, mitochondrial precursor [Rattus
norvegicus]
gi|1352174|sp|P10818.2|CX6A1_RAT RecName: Full=Cytochrome c oxidase subunit 6A1, mitochondrial;
AltName: Full=Cytochrome c oxidase polypeptide
VIa-liver; Flags: Precursor
gi|149063563|gb|EDM13886.1| cytochrome c oxidase, subunit VIa, polypeptide 1 [Rattus
norvegicus]
Length = 111
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 2 ASRLGQMMMRKFS--TSPAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEE 59
ASR+ ++ R P + G + ++W+ LTYF ALP + + V+L+ + EE
Sbjct: 8 ASRVSGLLGRALPRVGRPMSSGAHGEEGSARIWKALTYFVALPGVGVSMLNVFLKSRHEE 67
Query: 60 EHHVRPEFVKREYLYIRNR 78
H RPEFV +L IR +
Sbjct: 68 --HERPEFVAYPHLRIRTK 84
>gi|332373668|gb|AEE61975.1| unknown [Dendroctonus ponderosae]
Length = 112
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 1 MASRLGQMMMRKFSTSPAMKSSAGNPDAV--------KLWRNLTYFGALPCCALVGVYVY 52
MA+ L + R F TS AV K W+ LT+F A P L V Y
Sbjct: 1 MAAVLNHALRRFFQTSAQRAVQIEGHSAVSGIHEGGYKPWKKLTFFVAFPSIILCAVNCY 60
Query: 53 LEHQAEEEHHVRPEFVKREYLYIRNR 78
+ HQ +H +FVK EYL IR++
Sbjct: 61 MVHQDHAKHPHEKKFVKYEYLAIRSK 86
>gi|357630612|gb|EHJ78614.1| mitochondrial cytochrome c oxidase subunit VIa [Danaus plexippus]
Length = 96
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 30 KLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYIRNR 78
+LW+ L+ F A+P L + YL HQ EEHH RP FV EYL +R +
Sbjct: 22 QLWKRLSIFVAVPAIGLGMLNAYLAHQ--EEHHERPPFVAFEYLRVRTK 68
>gi|871526|emb|CAA51286.1| cytochrome-c oxidase [Rattus norvegicus]
Length = 98
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 2 ASRLGQMMMRKFS--TSPAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEE 59
ASR+ ++ R P + G + ++W+ LTYF ALP + + V+L+ + EE
Sbjct: 8 ASRVSGLLGRALPRVGRPMSSGAHGEEGSARIWKALTYFVALPGVGVSMLNVFLKSRHEE 67
Query: 60 EHHVRPEFVKREYLYIRNR 78
H RPEFV +L IR +
Sbjct: 68 --HERPEFVAYPHLRIRTK 84
>gi|402860137|ref|XP_003894491.1| PREDICTED: cytochrome c oxidase subunit 6A1, mitochondrial-like
[Papio anubis]
Length = 109
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 17 PAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLE-HQAEEEHHVRPEFVKREYLYI 75
P + + G ++ ++W+ LT+F ALP A+ + VYL+ H E E RPEF+ +L I
Sbjct: 23 PMLSGAHGEEESARMWKTLTFFVALPGVAVSMLNVYLKSHHGEHE---RPEFIAYPHLRI 79
Query: 76 RNR 78
R +
Sbjct: 80 RTK 82
>gi|426247380|ref|XP_004017464.1| PREDICTED: cytochrome c oxidase subunit 6A1, mitochondrial-like
[Ovis aries]
Length = 109
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Query: 2 ASRLGQMMMR-KFSTSPAMKSSA-GNPDAVKLWRNLTYFGALPCCALVGVYVYLE-HQAE 58
SR+ ++ R + S M S A G + ++W+ LTYF ALP + + V+L+ H E
Sbjct: 6 GSRVSGLLGRSRLQLSRCMSSGAHGEEGSARMWKALTYFVALPGVGVSMLNVFLKSHHGE 65
Query: 59 EEHHVRPEFVKREYLYIRNR 78
EE RPEFV +L IR++
Sbjct: 66 EE---RPEFVAYPHLRIRSK 82
>gi|194214241|ref|XP_001488716.2| PREDICTED: cytochrome c oxidase subunit 6A1, mitochondrial-like
[Equus caballus]
Length = 109
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 6/80 (7%)
Query: 2 ASRLGQMMMRKFST--SPAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLE-HQAE 58
ASR+ ++ R + P + G + ++W+ LTYF ALP + + V+L+ HQ E
Sbjct: 6 ASRVSGLLGRSRAQLGRPMSSGAHGEEGSARMWKALTYFVALPGVGVSMLNVFLKSHQGE 65
Query: 59 EEHHVRPEFVKREYLYIRNR 78
E RPEFV +L IR++
Sbjct: 66 HE---RPEFVAYPHLRIRSK 82
>gi|348585405|ref|XP_003478462.1| PREDICTED: cytochrome c oxidase subunit 6A1, mitochondrial-like
[Cavia porcellus]
Length = 110
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 5/78 (6%)
Query: 3 SRLGQMMMR-KFSTSPAMKSSA-GNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEE 60
SR+ +++ R + M S A G+ + ++W+ LT+F ALP A+ + V+L+ EEE
Sbjct: 9 SRVSRLLGRSRLQVGRLMSSGAHGHEGSARMWKALTFFVALPGVAVSMLNVFLKSHHEEE 68
Query: 61 HHVRPEFVKREYLYIRNR 78
RPEF+ +L IR +
Sbjct: 69 ---RPEFIAYPHLRIRTK 83
>gi|195455757|ref|XP_002074853.1| GK23279 [Drosophila willistoni]
gi|194170938|gb|EDW85839.1| GK23279 [Drosophila willistoni]
Length = 109
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 30 KLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYIRNR 78
K+W+ L++F A+P L + YL+HQ EE H R EFVK EYL R +
Sbjct: 36 KVWKRLSFFVAVPAVGLCMLNAYLKHQ-EEHDHPRQEFVKYEYLRRREK 83
>gi|390468269|ref|XP_002753141.2| PREDICTED: cytochrome c oxidase subunit 6A1, mitochondrial-like
[Callithrix jacchus]
Length = 108
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Query: 1 MASRLGQMMMRKFSTSPAMKSSAGNPD--AVKLWRNLTYFGALPCCALVGVYVYLEHQAE 58
+ASRL +++ R SSA + + ++W+ LT+F ALP + + VYL+ Q E
Sbjct: 5 VASRLSRLLGRSRPQVGRPMSSAAHSGEGSARMWKILTFFVALPGVGVSMLNVYLKSQKE 64
Query: 59 EEHHVRPEFVKREYLYIRNR 78
E RPEFV +L IR +
Sbjct: 65 HE---RPEFVAYPHLRIRTK 81
>gi|20130301|ref|NP_611805.1| levy [Drosophila melanogaster]
gi|7291601|gb|AAF47024.1| levy [Drosophila melanogaster]
gi|17944459|gb|AAL48119.1| RH03295p [Drosophila melanogaster]
gi|220949164|gb|ACL87125.1| levy-PA [synthetic construct]
gi|220958324|gb|ACL91705.1| levy-PA [synthetic construct]
Length = 109
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 1 MASRLGQMMMRKFSTSPA--MKSSAG----NPDAVKLWRNLTYFGALPCCALVGVYVYLE 54
M++ L + R+F S A M +A + K+W+ L++F A+P L + YL+
Sbjct: 1 MSAILNHAIRRQFGASAARNMSGTAAVAGEHSGGYKVWKRLSFFVAVPAVGLCMLNAYLK 60
Query: 55 HQAEEEHHVRPEFVKREYLYIRNR 78
HQ EE R EFVK +YL R +
Sbjct: 61 HQ-EEHDKPRQEFVKYDYLRRREK 83
>gi|157111562|ref|XP_001651621.1| cytochrome c oxidase, subunit VIA, putative [Aedes aegypti]
gi|108883795|gb|EAT48020.1| AAEL000929-PA [Aedes aegypti]
Length = 111
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 14 STSPAMKSSAGNP-DAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREY 72
T+ A+ ++G+ K W+NL+ F A P L V +++H +EE RPEFV E+
Sbjct: 22 GTTAAIPGASGSGHGGYKKWKNLSLFVAFPAVGLAMVNAFVQHSSEERE--RPEFVPYEH 79
Query: 73 LYIRNR 78
+ IR +
Sbjct: 80 MRIRTK 85
>gi|195384171|ref|XP_002050791.1| GJ22345 [Drosophila virilis]
gi|194145588|gb|EDW61984.1| GJ22345 [Drosophila virilis]
Length = 109
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 30 KLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYIRNR 78
K+W+ L++F A+P L + YL+HQ EE H R EFVK +YL R +
Sbjct: 36 KVWKRLSFFVAMPAVGLCMLNAYLKHQ-EEHDHPRQEFVKYDYLRRREK 83
>gi|118150776|ref|NP_001071299.1| cytochrome c oxidase subunit 6A1, mitochondrial precursor [Bos
taurus]
gi|358421694|ref|XP_003585081.1| PREDICTED: cytochrome c oxidase subunit 6A1, mitochondrial-like
[Bos taurus]
gi|226694158|sp|P13182.3|CX6A1_BOVIN RecName: Full=Cytochrome c oxidase subunit 6A1, mitochondrial;
AltName: Full=Cytochrome c oxidase polypeptide
VIa-liver; AltName: Full=Cytochrome c oxidase subunit
SSG; Flags: Precursor
gi|89994099|gb|AAI14183.1| Cytochrome c oxidase subunit VIa polypeptide 1 [Bos taurus]
gi|296478453|tpg|DAA20568.1| TPA: cytochrome c oxidase subunit 6A1, mitochondrial precursor
[Bos taurus]
gi|440909517|gb|ELR59417.1| Cytochrome c oxidase subunit 6A1, mitochondrial [Bos grunniens
mutus]
Length = 109
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 5 LGQMMMRKFSTSPAMKSSA-GNPDAVKLWRNLTYFGALPCCALVGVYVYLE-HQAEEEHH 62
G + + S M S A G + ++W+ LTYF ALP + + V+L+ H EEE
Sbjct: 10 FGLLGRSRLQLSRCMSSGAHGEEGSARMWKALTYFVALPGVGVSMLNVFLKSHHGEEE-- 67
Query: 63 VRPEFVKREYLYIRNR 78
RPEFV +L IR++
Sbjct: 68 -RPEFVAYPHLRIRSK 82
>gi|194885378|ref|XP_001976426.1| GG22865 [Drosophila erecta]
gi|190659613|gb|EDV56826.1| GG22865 [Drosophila erecta]
Length = 109
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 1 MASRLGQMMMRKFSTSPA--MKSSAG----NPDAVKLWRNLTYFGALPCCALVGVYVYLE 54
M++ L + R+F + A M +A + K+W+ L++F A+P L + YL+
Sbjct: 1 MSAILNHAIRRQFGATAARNMSGTAAVAGEHSGGYKVWKRLSFFVAVPAVGLCMLNAYLK 60
Query: 55 HQAEEEHHVRPEFVKREYLYIRNR 78
HQ EE R EFVK EYL R +
Sbjct: 61 HQ-EEHDKPRQEFVKYEYLRRREK 83
>gi|410340805|gb|JAA39349.1| cytochrome c oxidase subunit VIa polypeptide 1 [Pan troglodytes]
Length = 109
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 17 PAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLE-HQAEEEHHVRPEFVKREYLYI 75
P + G + ++W+ LT+F ALP A+ + VYL+ H E E RPEF+ +L I
Sbjct: 23 PMSSGAHGGEGSARMWKTLTFFVALPGVAVSMLNVYLKSHHGEHE---RPEFIAYPHLRI 79
Query: 76 RNR 78
R +
Sbjct: 80 RTK 82
>gi|344295213|ref|XP_003419308.1| PREDICTED: cytochrome c oxidase subunit 6A1, mitochondrial-like
[Loxodonta africana]
Length = 109
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 1 MASRLGQMMMRKFST--SPAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLE-HQA 57
++SR+ +++R P + G + ++W+ LT+F ALP + + V+L+ H
Sbjct: 5 VSSRVSGLLLRSRPQLRRPMASRARGEEGSARMWKALTFFVALPGVGISMLNVFLKSHHG 64
Query: 58 EEEHHVRPEFVKREYLYIRNR 78
EEE RPEFV +L IR++
Sbjct: 65 EEE---RPEFVAYPHLRIRSK 82
>gi|403281523|ref|XP_003932234.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit C,
mitochondrial isoform 2 [Saimiri boliviensis
boliviensis]
Length = 190
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 1 MASRLGQMMMRKFST--SPAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAE 58
+ SRL +++ R P ++ + ++W+ LT+F ALP + + VYL+ Q E
Sbjct: 5 VTSRLSRLLGRSRPQLGRPMSSAAESGEGSARMWKMLTFFVALPGVGVCMLNVYLKSQKE 64
Query: 59 EEHHVRPEFVKREYLYIRNRN 79
H RPEFV +L IR +
Sbjct: 65 ---HERPEFVAYPHLRIRTKG 82
>gi|444723182|gb|ELW63843.1| Cytochrome c oxidase subunit 6A1, mitochondrial [Tupaia
chinensis]
Length = 109
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 17 PAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYIR 76
P + G + ++W+ LTYF ALP + + V+L+ EE H RPEF+ +L IR
Sbjct: 23 PMSSGAHGEEGSARMWKALTYFVALPGVGVSMLNVFLKSHHEE--HERPEFIAYPHLRIR 80
Query: 77 NR 78
++
Sbjct: 81 SK 82
>gi|148222617|ref|NP_001089622.1| cytochrome c oxidase subunit 6a polypeptide 1 [Xenopus laevis]
gi|71051873|gb|AAH99297.1| MGC116489 protein [Xenopus laevis]
Length = 111
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 42/70 (60%), Gaps = 9/70 (12%)
Query: 11 RKFSTSPAMKSSAGNPDAVKLWRNLTYFGALPCCA--LVGVYVYLEHQAEEEHHVRPEFV 68
R FS + A + AG AV+ W+ L+ ALP A ++ VY+ ++H +EE RPEFV
Sbjct: 20 RLFSAAAAEQEHAG---AVRTWKILSAVVALPGVAVCMLNVYLKMQHHSEE----RPEFV 72
Query: 69 KREYLYIRNR 78
E+L IR++
Sbjct: 73 PYEHLRIRSK 82
>gi|380014020|ref|XP_003691042.1| PREDICTED: cytochrome c oxidase subunit 6A1, mitochondrial-like
[Apis florea]
Length = 114
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 28 AVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYIRNR 78
+KLW+ +T+F A P L V YL+HQ EE PEF+ YL I N+
Sbjct: 36 TIKLWKGVTFFVAFPLIGLAMVNCYLKHQ-EEHSKPPPEFIHYPYLKIMNK 85
>gi|53933242|ref|NP_001005592.1| cytochrome c oxidase subunit 6A1, mitochondrial [Danio rerio]
gi|51980454|gb|AAH81530.1| Cytochrome c oxidase subunit VIa polypeptide 1 [Danio rerio]
gi|182889330|gb|AAI64950.1| Cox6a1 protein [Danio rerio]
Length = 108
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 4 RLGQMMMRK--FSTSPAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEH 61
RL Q + + + S + ++A +A K W+ LT+ ALP A+ + +YL Q H
Sbjct: 6 RLSQKLFKSAALTQSRQLSAAAHGENAAKTWKILTFVVALPGVAVCMLNMYLRSQ---HH 62
Query: 62 HVRPEFVKREYLYIRNR 78
H +PEFV +L IR++
Sbjct: 63 HEQPEFVPYSHLRIRSK 79
>gi|426374366|ref|XP_004054045.1| PREDICTED: cytochrome c oxidase subunit 6A1, mitochondrial-like
isoform 1 [Gorilla gorilla gorilla]
gi|426374368|ref|XP_004054046.1| PREDICTED: cytochrome c oxidase subunit 6A1, mitochondrial-like
isoform 2 [Gorilla gorilla gorilla]
Length = 109
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 17 PAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLE-HQAEEEHHVRPEFVKREYLYI 75
P + G + ++W+ LT+F ALP A+ + VYL+ H E E RPEF+ +L I
Sbjct: 23 PMSSGAHGEEGSARMWKTLTFFVALPGVAVSMLNVYLKSHHGEHE---RPEFIAYPHLRI 79
Query: 76 RNR 78
R +
Sbjct: 80 RTK 82
>gi|17999528|ref|NP_004364.2| cytochrome c oxidase subunit 6A1, mitochondrial [Homo sapiens]
gi|332840574|ref|XP_003339284.1| PREDICTED: cytochrome c oxidase subunit 6A1, mitochondrial-like
isoform 2 [Pan troglodytes]
gi|6166030|sp|P12074.4|CX6A1_HUMAN RecName: Full=Cytochrome c oxidase subunit 6A1, mitochondrial;
AltName: Full=Cytochrome c oxidase polypeptide
VIa-liver; AltName: Full=Cytochrome c oxidase subunit
VIA-liver; Short=COX VIa-L; Flags: Precursor
gi|14043466|gb|AAH07723.1| Cytochrome c oxidase subunit VIa polypeptide 1 [Homo sapiens]
gi|47682364|gb|AAH70186.1| Cytochrome c oxidase subunit VIa polypeptide 1 [Homo sapiens]
gi|81294351|gb|AAI07862.1| Cytochrome c oxidase subunit VIa polypeptide 1 [Homo sapiens]
gi|123992846|gb|ABM84025.1| cytochrome c oxidase subunit VIa polypeptide 1 [synthetic
construct]
gi|123999658|gb|ABM87370.1| cytochrome c oxidase subunit VIa polypeptide 1 [synthetic
construct]
gi|189065224|dbj|BAG34947.1| unnamed protein product [Homo sapiens]
gi|377549890|emb|CCF23108.1| cytochrome c oxidase subunit VIa polypeptide 1 [Homo sapiens]
Length = 109
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 17 PAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLE-HQAEEEHHVRPEFVKREYLYI 75
P + G + ++W+ LT+F ALP A+ + VYL+ H E E RPEF+ +L I
Sbjct: 23 PMSSGAHGEEGSARMWKTLTFFVALPGVAVSMLNVYLKSHHGEHE---RPEFIAYPHLRI 79
Query: 76 RNR 78
R +
Sbjct: 80 RTK 82
>gi|426352983|ref|XP_004043981.1| PREDICTED: cytochrome c oxidase subunit 6A1, mitochondrial-like
[Gorilla gorilla gorilla]
Length = 109
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 17 PAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLE-HQAEEEHHVRPEFVKREYLYI 75
P + G + ++W+ LT+F ALP A+ + VYL+ H E E RPEF+ +L I
Sbjct: 23 PMSSGAHGEEGSARMWKTLTFFVALPGVAVSMLNVYLKSHHGEHE---RPEFIAYPHLRI 79
Query: 76 RNR 78
R +
Sbjct: 80 RTK 82
>gi|397496219|ref|XP_003818939.1| PREDICTED: cytochrome c oxidase subunit 6A1, mitochondrial-like
[Pan paniscus]
Length = 109
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 17 PAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYIR 76
P + G + ++W+ LT+F ALP A+ + VYL+ E H RPEF+ +L IR
Sbjct: 23 PMSSGAHGEEGSARMWKTLTFFVALPGVAVSMLNVYLKSHHGE--HQRPEFIAYPHLRIR 80
Query: 77 NR 78
+
Sbjct: 81 TK 82
>gi|195552203|ref|XP_002076395.1| GD15452 [Drosophila simulans]
gi|124014116|gb|ABM88308.1| mitochondrial cytochrome c oxidase subunit 6A isoform 1
[Drosophila simulans]
gi|124014118|gb|ABM88309.1| mitochondrial cytochrome c oxidase subunit 6A isoform 1
[Drosophila simulans]
gi|124014120|gb|ABM88310.1| mitochondrial cytochrome c oxidase subunit 6A isoform 1
[Drosophila simulans]
gi|124014122|gb|ABM88311.1| mitochondrial cytochrome c oxidase subunit 6A isoform 1
[Drosophila simulans]
gi|124014124|gb|ABM88312.1| mitochondrial cytochrome c oxidase subunit 6A isoform 1
[Drosophila simulans]
gi|124014126|gb|ABM88313.1| mitochondrial cytochrome c oxidase subunit 6A isoform 1
[Drosophila simulans]
gi|124014128|gb|ABM88314.1| mitochondrial cytochrome c oxidase subunit 6A isoform 1
[Drosophila simulans]
gi|124014130|gb|ABM88315.1| mitochondrial cytochrome c oxidase subunit 6A isoform 1
[Drosophila simulans]
gi|194202044|gb|EDX15620.1| GD15452 [Drosophila simulans]
Length = 109
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 1 MASRLGQMMMRKFSTSPA--MKSSAG----NPDAVKLWRNLTYFGALPCCALVGVYVYLE 54
M++ L + R+F + A M +A + K+W+ L++F A+P L + YL+
Sbjct: 1 MSAILNHAIRRQFGATAARNMSGTAAVAGEHSGGYKVWKRLSFFVAVPAVGLCMLNAYLK 60
Query: 55 HQAEEEHHVRPEFVKREYLYIRNR 78
HQ EE R EFVK +YL R +
Sbjct: 61 HQ-EEHDKPRQEFVKYDYLRRREK 83
>gi|195347126|ref|XP_002040105.1| GM16024 [Drosophila sechellia]
gi|194135454|gb|EDW56970.1| GM16024 [Drosophila sechellia]
Length = 109
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 1 MASRLGQMMMRKFSTSPA--MKSSAG----NPDAVKLWRNLTYFGALPCCALVGVYVYLE 54
M++ L + R+F + A M +A + K+W+ L++F A+P L + YL+
Sbjct: 1 MSAILNHAIRRQFGATAARNMSGTAAVAGEHSGGYKVWKRLSFFVAVPAVGLCMLNAYLK 60
Query: 55 HQAEEEHHVRPEFVKREYLYIRNR 78
HQ EE R EFVK +YL R +
Sbjct: 61 HQ-EEHDKPRQEFVKYDYLRRREK 83
>gi|110755333|ref|XP_001121817.1| PREDICTED: cytochrome c oxidase subunit 6A1, mitochondrial [Apis
mellifera]
Length = 114
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 28 AVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYIRNR 78
++KLW+++T+F A P L YL+HQ EE PEFV YL I N+
Sbjct: 36 SIKLWKSITFFVAFPIIGLAMANCYLKHQ-EEHSKPPPEFVHYPYLKIMNK 85
>gi|397524929|ref|XP_003832433.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit C,
mitochondrial isoform 2 [Pan paniscus]
Length = 191
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 17 PAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLE-HQAEEEHHVRPEFVKREYLYI 75
P + G + ++W+ LT+F ALP A+ + VYL+ H E H RPEF+ +L I
Sbjct: 23 PMSSGAHGEEGSARMWKTLTFFVALPGVAVSMLNVYLKSHHGE---HERPEFIAYPHLRI 79
Query: 76 RNRN 79
R +
Sbjct: 80 RTKG 83
>gi|90820016|gb|ABD98765.1| putative mitochondrial cytochrome c oxidase subunit VI a
polypeptide 1 [Graphocephala atropunctata]
Length = 113
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 1 MASRLGQMMMRKFSTSPA-MKSSAGNPD----AVKLWRNLTYFGALPCCALVGVYVYLEH 55
MA ++ ++FSTS + S G P+ VKLW+NL+ F +P L V +
Sbjct: 1 MAGLASFVLRKQFSTSSRRLMSHGGTPEELEAGVKLWKNLSLFVGIPAVGLCMVNTVI-- 58
Query: 56 QAEEEHHVRPEFVKREYLYIRNR 78
+EE H PEF E++ +R +
Sbjct: 59 STKEEDHTPPEFHAYEHMRMRTK 81
>gi|290578534|gb|ADD51163.1| cytochrome c oxidase subunit VIa [Apis mellifera]
Length = 95
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 28 AVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYIRNR 78
++KLW+++T+F A P L YL+HQ EE PEFV YL I N+
Sbjct: 36 SMKLWKSITFFVAFPMIGLAMANCYLKHQ-EEHSKPPPEFVHYPYLKIMNK 85
>gi|156402503|ref|XP_001639630.1| predicted protein [Nematostella vectensis]
gi|156226759|gb|EDO47567.1| predicted protein [Nematostella vectensis]
Length = 117
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 15/90 (16%)
Query: 1 MASR-LGQMMMRKFSTSPAMKSSAGNP---------DAVKLWRNLTYFGALPCCALVGVY 50
MASR +++ R+ +SP ++ +K WRN++ F A+P +G+
Sbjct: 1 MASRQFARLLARRLHSSPKSRTPLKEEYITEEIHAEGTMKTWRNVSAFVAIPA---IGIC 57
Query: 51 VYLEHQAEEEHH--VRPEFVKREYLYIRNR 78
+Y ++ E+EHH RP+FV+ +L IR++
Sbjct: 58 IYNAYKLEQEHHHHPRPDFVEYSHLRIRSK 87
>gi|209733996|gb|ACI67867.1| Cytochrome c oxidase polypeptide VIa, mitochondrial precursor
[Salmo salar]
Length = 113
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 4 RLGQMMMRKFSTSPAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHV 63
R + R+ S S A S G A + W+ L++ ALP A+ + +YL+ Q HHV
Sbjct: 13 RSSMIQTRQLSASAA--HSHGEQTA-RTWKILSFVVALPGVAVCMLNMYLKMQQHAAHHV 69
Query: 64 RPEFVKREYLYIRNR 78
PEFV +L IR++
Sbjct: 70 EPEFVPYSHLRIRSK 84
>gi|119618596|gb|EAW98190.1| cytochrome c oxidase subunit VIa polypeptide 1, isoform CRA_a [Homo
sapiens]
gi|119618597|gb|EAW98191.1| cytochrome c oxidase subunit VIa polypeptide 1, isoform CRA_a [Homo
sapiens]
Length = 152
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 17 PAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLE-HQAEEEHHVRPEFVKREYLYI 75
P + G + ++W+ LT+F ALP A+ + VYL+ H E E RPEF+ +L I
Sbjct: 66 PMSSGAHGEEGSARMWKTLTFFVALPGVAVSMLNVYLKSHHGEHE---RPEFIAYPHLRI 122
Query: 76 RNR 78
R +
Sbjct: 123 RTK 125
>gi|297493734|gb|ADI40589.1| cytochrome c oxidase subunit VIa polypeptide 1 [Miniopterus
schreibersii]
Length = 88
Score = 43.1 bits (100), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 19 MKSSA-GNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYIRN 77
M S A G + ++W+ LTYF ALP + + V+L+ EE H RPEF+ +L IR
Sbjct: 15 MSSGAHGEEGSARMWKALTYFVALPGVGVSMLNVFLKSHHEE--HERPEFIAYPHLRIRT 72
Query: 78 R 78
+
Sbjct: 73 K 73
>gi|402887867|ref|XP_003907302.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit C,
mitochondrial isoform 2 [Papio anubis]
Length = 191
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Query: 17 PAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLE-HQAEEEHHVRPEFVKREYLYI 75
P + G + ++W+ LT+F ALP A+ + VYL+ H E H RPEF+ +L I
Sbjct: 23 PMSSGAHGEEGSARMWKTLTFFVALPGVAVSMLNVYLKSHHGE---HERPEFIAYPHLRI 79
Query: 76 RNRN 79
R +
Sbjct: 80 RTKG 83
>gi|296487595|tpg|DAA29708.1| TPA: cytochrome c oxidase subunit 6A1, mitochondrial-like [Bos
taurus]
Length = 109
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 2 ASRLGQMMMRK-FSTSPAMKSSA-GNPDAVKLWRNLTYFGALPCCALVGVYVYLE-HQAE 58
SR+ ++ R S M S G + ++W+ LTYF ALP + + V+L+ H E
Sbjct: 6 GSRVSGLLGRSGLQLSRCMSSGTHGEEGSARIWKALTYFVALPGVGVSMLNVFLKSHHGE 65
Query: 59 EEHHVRPEFVKREYLYIRNR 78
EE RPEFV +L IR++
Sbjct: 66 EE---RPEFVAYPHLRIRSK 82
>gi|354497471|ref|XP_003510843.1| PREDICTED: cytochrome c oxidase subunit 6A1, mitochondrial-like
[Cricetulus griseus]
Length = 155
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 2 ASRLGQMMMRKFS--TSPAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEE 59
ASR+ ++ R P + G + ++W+ LTYF ALP + + V+L+ + E
Sbjct: 52 ASRMSGLLSRALPRVGRPMSSGAHGEEGSARMWKALTYFVALPGVGVSMLNVFLKSRHAE 111
Query: 60 EHHVRPEFVKREYLYIRNR 78
H RPEFV +L IR +
Sbjct: 112 --HERPEFVAYPHLRIRTK 128
>gi|195489200|ref|XP_002092636.1| GE14301 [Drosophila yakuba]
gi|38048357|gb|AAR10081.1| similar to Drosophila melanogaster CG17280, partial [Drosophila
yakuba]
gi|194178737|gb|EDW92348.1| GE14301 [Drosophila yakuba]
Length = 109
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 1 MASRLGQMMMRKFSTSPA--MKSSAG----NPDAVKLWRNLTYFGALPCCALVGVYVYLE 54
M++ L + R+F + A M +A + K+W+ L++F A+P L + YL+
Sbjct: 1 MSAILNHAIRRQFGATAARNMSGTAAVAGEHSGGYKVWKRLSFFVAVPAVGLCMLNAYLK 60
Query: 55 HQAEEEHHVRPEFVKREYLYIRNR 78
HQ EE R EFVK +YL R +
Sbjct: 61 HQ-EEHDKPRQEFVKYDYLRRREK 83
>gi|410976738|ref|XP_003994770.1| PREDICTED: cytochrome c oxidase subunit 6A1, mitochondrial-like
[Felis catus]
Length = 109
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 6/80 (7%)
Query: 2 ASRLGQMMMRKFST-SPAMKSSA-GNPDAVKLWRNLTYFGALPCCALVGVYVYLE-HQAE 58
ASR ++ R + +M S A G + ++W+ LTYF ALP + + V+L+ H E
Sbjct: 6 ASRFSGLLGRSGAQRGRSMSSGAHGEEGSARMWKALTYFVALPGVGVSMLNVFLKSHHGE 65
Query: 59 EEHHVRPEFVKREYLYIRNR 78
E RPEFV +L IR++
Sbjct: 66 HE---RPEFVAYPHLRIRSK 82
>gi|440903707|gb|ELR54332.1| hypothetical protein M91_17018 [Bos grunniens mutus]
Length = 109
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 2 ASRLGQMMMRK-FSTSPAMKSSA-GNPDAVKLWRNLTYFGALPCCALVGVYVYLE-HQAE 58
SR+ ++ R S M S G + ++W+ LTYF ALP + + V+L+ H E
Sbjct: 6 GSRVSGLLGRSGLQLSRCMSSGTHGEEGSARMWKALTYFVALPGVGVSMLNVFLKSHHGE 65
Query: 59 EEHHVRPEFVKREYLYIRNR 78
EE RPEFV +L IR++
Sbjct: 66 EE---RPEFVAYPHLRIRSK 82
>gi|297493738|gb|ADI40591.1| cytochrome c oxidase subunit VIa polypeptide 1 [Rousettus
leschenaultii]
Length = 94
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 17 PAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYIR 76
P + G + ++W+ LTYF ALP A+ + V+L+ + E H RPEF+ +L IR
Sbjct: 15 PMSSGAHGEEGSARMWKALTYFVALPGVAVSMLNVFLKSRHGE--HERPEFIAYPHLRIR 72
Query: 77 NR 78
++
Sbjct: 73 SK 74
>gi|332262554|ref|XP_003280327.1| PREDICTED: cytochrome c oxidase subunit 6A1, mitochondrial-like
isoform 2 [Nomascus leucogenys]
Length = 88
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 17 PAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLE-HQAEEEHHVRPEFVKREYLYI 75
P + G + ++W+ LT+F ALP A+ + VYL+ H E E RPEF+ +L I
Sbjct: 23 PMSSGAHGEEGSARMWKTLTFFVALPGVAVSMLNVYLKSHHGEHE---RPEFIAYPHLRI 79
Query: 76 R 76
R
Sbjct: 80 R 80
>gi|225715662|gb|ACO13677.1| Cytochrome c oxidase polypeptide VIa, mitochondrial precursor
[Esox lucius]
Length = 111
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 3 SRLGQMMMR-KFSTSPAMKSSAGN---PDAVKLWRNLTYFGALPCCALVGVYVYLEHQAE 58
R+ Q ++R S S + SA + A + W+ L++ ALP A+ + +YL+
Sbjct: 5 GRISQALLRYSLSQSRQLSVSAAHGHGEKAARTWKILSFVVALPGVAVCMLNMYLKMHEH 64
Query: 59 EEHHVRPEFVKREYLYIRNR 78
HHV PEFV +L IR++
Sbjct: 65 AAHHVEPEFVPYSHLRIRSK 84
>gi|209734560|gb|ACI68149.1| Cytochrome c oxidase polypeptide VIa, mitochondrial precursor
[Salmo salar]
Length = 113
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 4 RLGQMMMRKFSTSPAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHV 63
R + R+ S S A S G A W+ L++ ALP A+ + +YL+ Q HHV
Sbjct: 13 RSSMIQTRQLSASAA--HSHGEQTATT-WKILSFVVALPGVAVCMLNMYLKMQQHAAHHV 69
Query: 64 RPEFVKREYLYIRNR 78
PEFV +L IR++
Sbjct: 70 EPEFVPYSHLRIRSK 84
>gi|126324377|ref|XP_001376841.1| PREDICTED: cytochrome c oxidase subunit 6A1, mitochondrial-like
[Monodelphis domestica]
Length = 109
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 30 KLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYIRNR 78
+LW+ LT+F ALP A+ + YL+ +EHH RP FV +L IR +
Sbjct: 37 RLWKTLTFFVALPGVAVSMLNAYLK---SKEHHERPSFVPYPHLRIRTK 82
>gi|194755104|ref|XP_001959832.1| GF13063 [Drosophila ananassae]
gi|190621130|gb|EDV36654.1| GF13063 [Drosophila ananassae]
Length = 109
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 5 LGQMMMRKFSTSPAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVR 64
LG R S + A+ + + K+W+ L++F A+P L + YL+HQ EE R
Sbjct: 13 LGATAARNMSGTAAV--AGEHSGGYKVWKRLSFFVAVPAVGLCMLNAYLKHQ-EEHDKPR 69
Query: 65 PEFVKREYLYIRNR 78
EFVK +YL R +
Sbjct: 70 QEFVKYDYLRRREK 83
>gi|332262552|ref|XP_003280326.1| PREDICTED: cytochrome c oxidase subunit 6A1, mitochondrial-like
isoform 1 [Nomascus leucogenys]
Length = 109
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 17 PAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLE-HQAEEEHHVRPEFVKREYLYI 75
P + G + ++W+ LT+F ALP A+ + VYL+ H E E RPEF+ +L I
Sbjct: 23 PMSSGAHGEEGSARMWKTLTFFVALPGVAVSMLNVYLKSHHGEHE---RPEFIAYPHLRI 79
Query: 76 RNR 78
R +
Sbjct: 80 RPK 82
>gi|164422311|gb|ABY55253.1| cytochrome c oxidase subunit VIa polypeptide 1 [Oncorhynchus
masou formosanus]
Length = 136
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 4 RLGQMMMRKFSTSPAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHV 63
R + R+ S S A S G A + W+ L++ ALP A+ + +YL+ Q HHV
Sbjct: 13 RSSIIQTRQLSASAA--HSHGEQTA-RTWKILSFVVALPGVAVCMLNMYLKMQRHAAHHV 69
Query: 64 RPEFVKREYLYIRNR 78
PEFV +L IR++
Sbjct: 70 EPEFVPYSHLRIRSK 84
>gi|6680988|ref|NP_031774.1| cytochrome c oxidase subunit 6A1, mitochondrial [Mus musculus]
gi|567766|gb|AAA53066.1| cytochrome c oxidase [Mus musculus]
gi|12832359|dbj|BAB22073.1| unnamed protein product [Mus musculus]
gi|13277855|gb|AAH03807.1| Cytochrome c oxidase, subunit VI a, polypeptide 1 [Mus musculus]
gi|26386158|dbj|BAB31662.2| unnamed protein product [Mus musculus]
gi|56078778|gb|AAH52816.1| Cytochrome c oxidase, subunit VI a, polypeptide 1 [Mus musculus]
gi|74151378|dbj|BAE38808.1| unnamed protein product [Mus musculus]
gi|148687915|gb|EDL19862.1| cytochrome c oxidase, subunit VI a, polypeptide 1 [Mus musculus]
gi|1094404|prf||2106151A cytochrome c oxidase:SUBUNIT=VIa
Length = 112
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 2 ASRLGQMMMRKFST--SPAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEE 59
ASR+ + + R P + G + ++W+ LTYF ALP + + V+L+ + EE
Sbjct: 9 ASRVSRPLGRALPGLRRPMSSGAHGEEGSARMWKALTYFVALPGVGVSMLNVFLKSRHEE 68
Query: 60 EHHVRPEFVKREYLYIRNR 78
H RP FV +L IR +
Sbjct: 69 --HERPPFVAYPHLRIRTK 85
>gi|1352173|sp|P43024.2|CX6A1_MOUSE RecName: Full=Cytochrome c oxidase subunit 6A1, mitochondrial;
AltName: Full=Cytochrome c oxidase polypeptide
VIa-liver; Flags: Precursor
Length = 111
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 2 ASRLGQMMMRKFST--SPAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEE 59
ASR+ + + R P + G + ++W+ LTYF ALP + + V+L+ + EE
Sbjct: 8 ASRVSRPLGRALPGLRRPMSSGAHGEEGSARMWKALTYFVALPGVGVSMLNVFLKSRHEE 67
Query: 60 EHHVRPEFVKREYLYIRNR 78
H RP FV +L IR +
Sbjct: 68 --HERPPFVAYPHLRIRTK 84
>gi|60826475|gb|AAX36759.1| cytochrome c oxidase subunit VIa polypeptide 1 [synthetic
construct]
Length = 87
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 5/62 (8%)
Query: 19 MKSSA-GNPDAVKLWRNLTYFGALPCCALVGVYVYLE-HQAEEEHHVRPEFVKREYLYIR 76
M S A G + ++W+ LT+F ALP A+ + VYL+ H E E RPEF+ +L IR
Sbjct: 1 MSSGAHGEEGSARMWKTLTFFVALPGVAVSMLNVYLKSHHGEHE---RPEFIAYPHLRIR 57
Query: 77 NR 78
+
Sbjct: 58 TK 59
>gi|281340835|gb|EFB16419.1| hypothetical protein PANDA_020893 [Ailuropoda melanoleuca]
Length = 108
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Query: 3 SRLGQMMMRKFST-SPAMKSSA-GNPDAVKLWRNLTYFGALPCCALVGVYVYLE-HQAEE 59
SRL ++ R + +M S A G + ++W+ LTYF ALP + + V+L+ H E
Sbjct: 6 SRLSGLLGRPGAQLGRSMSSGAHGEEGSARMWKALTYFVALPGVGVSMLNVFLKSHHGEH 65
Query: 60 EHHVRPEFVKREYLYIRNR 78
E RPEFV +L IR++
Sbjct: 66 E---RPEFVAYPHLRIRSK 81
>gi|60826499|gb|AAX36760.1| cytochrome c oxidase subunit VIa polypeptide 1 [synthetic
construct]
gi|61365434|gb|AAX42707.1| cytochrome c oxidase subunit VIa polypeptide 1 [synthetic
construct]
Length = 87
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 5/62 (8%)
Query: 19 MKSSA-GNPDAVKLWRNLTYFGALPCCALVGVYVYLE-HQAEEEHHVRPEFVKREYLYIR 76
M S A G + ++W+ LT+F ALP A+ + VYL+ H E E RPEF+ +L IR
Sbjct: 1 MSSGAHGEEGSARMWKTLTFFVALPGVAVSMLNVYLKSHHGEHE---RPEFIAYPHLRIR 57
Query: 77 NR 78
+
Sbjct: 58 TK 59
>gi|30153|emb|CAA33392.1| unnamed protein product [Homo sapiens]
gi|4099125|gb|AAD00554.1| cytochrome c oxidase subunit VIa [Homo sapiens]
gi|60814619|gb|AAX36309.1| cytochrome c oxidase subunit VIa polypeptide 1 [synthetic
construct]
gi|60814640|gb|AAX36310.1| cytochrome c oxidase subunit VIa polypeptide 1 [synthetic
construct]
gi|61355442|gb|AAX41140.1| cytochrome c oxidase subunit VIa polypeptide 1 [synthetic
construct]
Length = 86
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 5/62 (8%)
Query: 19 MKSSA-GNPDAVKLWRNLTYFGALPCCALVGVYVYLE-HQAEEEHHVRPEFVKREYLYIR 76
M S A G + ++W+ LT+F ALP A+ + VYL+ H E E RPEF+ +L IR
Sbjct: 1 MSSGAHGEEGSARMWKTLTFFVALPGVAVSMLNVYLKSHHGEHE---RPEFIAYPHLRIR 57
Query: 77 NR 78
+
Sbjct: 58 TK 59
>gi|441630080|ref|XP_004089503.1| PREDICTED: cytochrome c oxidase subunit 6A1, mitochondrial-like
[Nomascus leucogenys]
Length = 109
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 17 PAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLE-HQAEEEHHVRPEFVKREYLYI 75
P + G + ++W+ LT+F ALP A+ + VYL+ H E E RPEF+ +L I
Sbjct: 23 PMSSGAHGEEGSARMWKTLTFFVALPGVAVSMLNVYLKSHHGEHE---RPEFIAYPHLRI 79
Query: 76 R 76
R
Sbjct: 80 R 80
>gi|818021|emb|CAA31067.1| cytochrome c oxidase subunit VIa (85 AA) [Rattus norvegicus]
Length = 85
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 24 GNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYIRNR 78
G + ++W+ LTYF ALP + + V+L+ + EE H RPEFV +L IR +
Sbjct: 6 GEEGSARIWKALTYFVALPGVGVSMLNVFLKSRHEE--HERPEFVAYPHLRIRTK 58
>gi|402911360|ref|XP_003918301.1| PREDICTED: cytochrome c oxidase subunit 6A1, mitochondrial-like
[Papio anubis]
Length = 109
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 17 PAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLE-HQAEEEHHVRPEFVKREYLYI 75
P + G + ++W+ LT+F ALP A+ + VYL+ H E E RP+F+ +L I
Sbjct: 23 PMSSGTHGEEGSARMWKTLTFFVALPGVAVSMLNVYLKSHHGERE---RPQFIAYPHLRI 79
Query: 76 RNR 78
R +
Sbjct: 80 RTK 82
>gi|383857026|ref|XP_003704007.1| PREDICTED: cytochrome c oxidase subunit 6A1, mitochondrial-like
[Megachile rotundata]
Length = 107
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 4 RLGQM--MMRKFSTSPAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEH 61
++GQ R+ PA ++ K+WRN+T F LP L + YL+ + +H
Sbjct: 7 KIGQFGHAFRRGIVRPASEAHTPGEAGEKMWRNITLFVGLPSLILSSINCYLQ---KNDH 63
Query: 62 HVRPEFVKREYLYIRNR 78
RPE + Y+ I NR
Sbjct: 64 PPRPEIIDYPYMKILNR 80
>gi|355564742|gb|EHH21242.1| hypothetical protein EGK_04259 [Macaca mulatta]
Length = 109
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 17 PAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLE-HQAEEEHHVRPEFVKREYLYI 75
P + G + ++W+ LT+F ALP A+ + VYL+ H E E RP+F+ +L I
Sbjct: 23 PVSSGAHGEEGSARMWKTLTFFVALPGVAVSMLNVYLKSHHGEHE---RPKFIAYPHLRI 79
Query: 76 RNR 78
R +
Sbjct: 80 RTK 82
>gi|297493732|gb|ADI40588.1| cytochrome c oxidase subunit VIa polypeptide 1 [Scotophilus
kuhlii]
Length = 88
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 17 PAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLE-HQAEEEHHVRPEFVKREYLYI 75
P + G + +LW+ LTYF ALP + + V+L+ H E E RPEF+ +L I
Sbjct: 14 PMSSGAHGEEGSARLWKALTYFVALPGVGVSMLNVFLKSHHGEHE---RPEFIAYPHLRI 70
Query: 76 RNR 78
R +
Sbjct: 71 RTK 73
>gi|355786586|gb|EHH66769.1| hypothetical protein EGM_03822 [Macaca fascicularis]
Length = 114
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 17 PAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLE-HQAEEEHHVRPEFVKREYLYI 75
P + G + ++W+ LT+F ALP A+ + VYL+ H E E RP+F+ +L I
Sbjct: 28 PVSSGAHGEEGSARMWKTLTFFVALPGVAVSMLNVYLKSHHGEHE---RPKFIAYPHLRI 84
Query: 76 RNR 78
R +
Sbjct: 85 RTK 87
>gi|417395773|gb|JAA44929.1| Putative cytochrome c oxidase subunit 6a1 mitochondrial [Desmodus
rotundus]
Length = 109
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 24 GNPDAVKLWRNLTYFGALPCCALVGVYVYLE-HQAEEEHHVRPEFVKREYLYIRNR 78
G + ++WR LTYF ALP + + V+L+ H E E RPEFV +L IR++
Sbjct: 30 GEEGSARMWRALTYFVALPGVGVSMLNVFLKSHHGEHE---RPEFVAYPHLRIRSK 82
>gi|195146604|ref|XP_002014274.1| GL19036 [Drosophila persimilis]
gi|194106227|gb|EDW28270.1| GL19036 [Drosophila persimilis]
Length = 149
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 20 KSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYIRNRN 79
K SA + +KLWR+++ F LP A++ + V+ H+ E EH PEFV ++Y R +
Sbjct: 25 KESAHSGGGMKLWRSISLFAVLPMVAILTLLVFSTHK-EHEH---PEFVYYPFMYKRTKT 80
>gi|73995307|ref|XP_534704.2| PREDICTED: cytochrome c oxidase subunit 6A1, mitochondrial-like
isoform 2 [Canis lupus familiaris]
gi|345790934|ref|XP_003433433.1| PREDICTED: cytochrome c oxidase subunit 6A1, mitochondrial-like
isoform 1 [Canis lupus familiaris]
Length = 110
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 5/63 (7%)
Query: 18 AMKSSA-GNPDAVKLWRNLTYFGALPCCALVGVYVYLE-HQAEEEHHVRPEFVKREYLYI 75
+M S A G + ++W+ LTYF ALP + + V+L+ H E E RPEF+ +L I
Sbjct: 24 SMSSGAHGEEGSARMWKALTYFVALPGVGVSMLNVFLKSHHGEHE---RPEFIAYPHLRI 80
Query: 76 RNR 78
R++
Sbjct: 81 RSK 83
>gi|395833924|ref|XP_003789967.1| PREDICTED: cytochrome c oxidase subunit 6A1, mitochondrial-like
[Otolemur garnettii]
Length = 108
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 17 PAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYIR 76
P + G + ++WR LT+F ALP + + V+L+ + E H RPEF+ +L IR
Sbjct: 22 PMSSGAHGEEGSARMWRALTFFVALPGVGVSMLNVFLKSRHGE--HERPEFIPYSHLRIR 79
Query: 77 NR 78
+
Sbjct: 80 TK 81
>gi|225705046|gb|ACO08369.1| Cytochrome c oxidase polypeptide VIa, mitochondrial precursor
[Oncorhynchus mykiss]
Length = 161
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 4 RLGQMMMRK-FSTSPAMKSSAGNPDA---VKLWRNLTYFGALPCCALVGVYVYLEHQAEE 59
R+ Q ++R + + ++A + A + W+ L++ ALP A+ + +YL+ Q
Sbjct: 6 RISQTLLRSSLIQTRQLSATAAHGHAEQTARTWKILSFVVALPGVAVCMLNMYLKMQHHA 65
Query: 60 EHHVRPEFVKREYLYIRNR 78
HHV PEFV +L IR++
Sbjct: 66 AHHVEPEFVPYSHLRIRSK 84
>gi|225705586|gb|ACO08639.1| Cytochrome c oxidase polypeptide VIa, mitochondrial precursor
[Oncorhynchus mykiss]
Length = 113
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 4 RLGQMMMRK-FSTSPAMKSSAGNPDA---VKLWRNLTYFGALPCCALVGVYVYLEHQAEE 59
R+ Q ++R + + ++A + A + W+ L++ ALP A+ + +YL+ Q
Sbjct: 6 RISQTLLRSSLIQTRQLSATAAHGHAEQTARTWKILSFVVALPGVAVCMLNMYLKMQHHA 65
Query: 60 EHHVRPEFVKREYLYIRNR 78
HHV PEFV +L IR++
Sbjct: 66 AHHVEPEFVPYSHLRIRSK 84
>gi|431914269|gb|ELK15527.1| Cytochrome c oxidase subunit 6A1, mitochondrial [Pteropus alecto]
Length = 110
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 17 PAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLE-HQAEEEHHVRPEFVKREYLYI 75
P + G + ++W+ LTYF ALP + + V+L+ H E E RPEF+ +L I
Sbjct: 24 PMSSGAHGEEGSARMWKALTYFVALPGVGVSMLNVFLKSHHGEHE---RPEFIAYPHLRI 80
Query: 76 RNR 78
R++
Sbjct: 81 RSK 83
>gi|297693176|ref|XP_002823912.1| PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit C,
mitochondrial isoform 1 [Pongo abelii]
Length = 191
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 17 PAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYIR 76
P + G + ++W+ LT+ ALP A+ + VYL+ + E H RPEF+ +L IR
Sbjct: 23 PMSSGAHGEEGSARMWKTLTFLVALPGVAVSMLNVYLKSRHGE--HERPEFIAYPHLRIR 80
Query: 77 NRN 79
+
Sbjct: 81 TKG 83
>gi|209735732|gb|ACI68735.1| Cytochrome c oxidase polypeptide VIa, mitochondrial precursor
[Salmo salar]
gi|223646160|gb|ACN09838.1| Cytochrome c oxidase polypeptide VIa, mitochondrial precursor
[Salmo salar]
gi|223672007|gb|ACN12185.1| Cytochrome c oxidase polypeptide VIa, mitochondrial precursor
[Salmo salar]
Length = 113
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%)
Query: 27 DAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYIRNR 78
+ W+ L++ ALP A+ + +YL+ Q HHV PEFV +L IR++
Sbjct: 33 QTARTWKILSFVVALPGVAVCMLNMYLKMQHHAAHHVEPEFVPYSHLRIRSK 84
>gi|301790885|ref|XP_002930447.1| PREDICTED: cytochrome c oxidase subunit 6A1, mitochondrial-like
[Ailuropoda melanoleuca]
Length = 170
Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 6/79 (7%)
Query: 3 SRLGQMMMRKFST-SPAMKSSA-GNPDAVKLWRNLTYFGALPCCALVGVYVYLE-HQAEE 59
SRL ++ R + +M S A G + ++W+ LTYF ALP + + V+L+ H E
Sbjct: 68 SRLSGLLGRPGAQLGRSMSSGAHGEEGSARMWKALTYFVALPGVGVSMLNVFLKSHHGEH 127
Query: 60 EHHVRPEFVKREYLYIRNR 78
E RPEFV +L IR++
Sbjct: 128 E---RPEFVAYPHLRIRSK 143
>gi|62858031|ref|NP_001016543.1| cytochrome c oxidase subunit 6a polypeptide 1 [Xenopus (Silurana)
tropicalis]
gi|89271881|emb|CAJ83526.1| cytochrome c oxidase subunit VIa polypeptide 1 [Xenopus
(Silurana) tropicalis]
gi|171847245|gb|AAI61502.1| cytochrome c oxidase subunit 6a polypeptide 1 [Xenopus (Silurana)
tropicalis]
Length = 111
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 11 RKFSTSPAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKR 70
R FS + + + AG AV+ W+ LTY ALP A+ + YL+ Q H PEF+
Sbjct: 20 RLFSAAASEQEHAG---AVRTWKILTYVVALPGVAVCMLNAYLKMQHHS--HENPEFIPY 74
Query: 71 EYLYIRNR 78
E+L IR +
Sbjct: 75 EHLRIRTK 82
>gi|344249204|gb|EGW05308.1| Cytochrome c oxidase subunit 6A1, mitochondrial [Cricetulus
griseus]
Length = 94
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 19 MKSSA-GNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYIRN 77
M S A G + ++W+ LTYF ALP + + V+L+ + E H RPEFV +L IR
Sbjct: 1 MSSGAHGEEGSARMWKALTYFVALPGVGVSMLNVFLKSRHAE--HERPEFVAYPHLRIRT 58
Query: 78 R 78
+
Sbjct: 59 K 59
>gi|390464278|ref|XP_002749255.2| PREDICTED: cytochrome c oxidase subunit 6A1, mitochondrial-like
[Callithrix jacchus]
Length = 108
Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 1 MASRLGQMMMRKFST--SPAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAE 58
+AS+L +++ R P ++ + ++W+ LT F ALP + + VYL+ Q E
Sbjct: 5 VASQLSRLLGRSRPQLGRPMSSAAHSGEGSARMWKILTLFVALPGVGVSMLNVYLKSQKE 64
Query: 59 EEHHVRPEFVKREYLYIRNR 78
E RPEFV +L IR +
Sbjct: 65 HE---RPEFVAYPHLRIRTK 81
>gi|475707|gb|AAA17836.1| cytochrome c oxidase subunit VIaL [Mus musculus]
gi|4090852|gb|AAC98895.1| cytochrome C oxidase subunit VIa homolog [Homo sapiens]
Length = 86
Score = 40.8 bits (94), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 19 MKSSA-GNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYIRN 77
M S A G + ++W+ LTYF ALP + + V+L+ + EE H RP FV +L IR
Sbjct: 1 MSSGAHGEEGSARMWKALTYFVALPGVGVSMLNVFLKSRHEE--HERPPFVAYPHLRIRT 58
Query: 78 R 78
+
Sbjct: 59 K 59
>gi|351702218|gb|EHB05137.1| Cytochrome c oxidase subunit 6A1, mitochondrial, partial
[Heterocephalus glaber]
Length = 108
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 2 ASRLGQMMMRKFSTSPAMKSSA--GNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEE 59
ASR+ +++ R + SS G + ++W+ LTYF ALP + + V+L+ + +
Sbjct: 5 ASRVSRLLGRSRPQVGRIMSSGAHGEQGSARMWKALTYFVALPGVGVSMLNVFLKSRHGK 64
Query: 60 EHHVRPEFVKREYLYIRNR 78
E RPEF+ +L IR +
Sbjct: 65 EE--RPEFIAYPHLRIRTK 81
>gi|288856324|ref|NP_001165814.1| cytochrome c oxidase subunit 6A1, mitochondrial [Nasonia
vitripennis]
Length = 104
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 21 SSAGNPDAVK----LWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYIR 76
SS G+P ++ +WRNL+ FG L + VYL EEH PEF+ E+L IR
Sbjct: 21 SSHGDPQKIQAAYNMWRNLSLFGVPVVLTLGFLNVYL----NEEHEEPPEFIPYEHLRIR 76
Query: 77 NR 78
+
Sbjct: 77 TK 78
>gi|355769243|gb|EHH62796.1| hypothetical protein EGM_19383 [Macaca fascicularis]
Length = 106
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 17 PAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYIR 76
P + + G ++ ++W+ LT+F ALP A+ + VYL + HH EF+ +L IR
Sbjct: 23 PMLSGAHGEEESARMWKTLTFFVALPGVAVSMLNVYL-----KSHHGEHEFIAYPHLRIR 77
Query: 77 NR 78
+
Sbjct: 78 TK 79
>gi|197128995|gb|ACH45493.1| putative cytochrome c oxidase subunit VIa polypeptide 1
[Taeniopygia guttata]
Length = 113
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 30 KLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYIRNR 78
++W+ LT+ ALP A+ + YL+ Q HH RPEFV +L IR +
Sbjct: 37 RMWKTLTFLVALPGVAVCMLNCYLKAQ---HHHERPEFVPYSHLRIRTK 82
>gi|297263671|ref|XP_002808040.1| PREDICTED: LOW QUALITY PROTEIN: cytochrome c oxidase subunit 6A1,
mitochondrial-like [Macaca mulatta]
Length = 152
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 17 PAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLE-HQAEEEHHVRPEFVKREYLYI 75
P + G + ++W+ LT+F ALP A+ + VYL+ H E E R EF+ +L I
Sbjct: 66 PVSSGAHGEEGSARMWKTLTFFVALPGVAVSMLNVYLKSHHGEHE---RSEFIAYPHLRI 122
Query: 76 RNR 78
R +
Sbjct: 123 RTK 125
>gi|242012085|ref|XP_002426771.1| cytochrome c oxidase polypeptide Via isoform 1, putative
[Pediculus humanus corporis]
gi|212510953|gb|EEB14033.1| cytochrome c oxidase polypeptide Via isoform 1, putative
[Pediculus humanus corporis]
Length = 116
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 15/83 (18%)
Query: 7 QMMMRKFSTSPAMKSSAGNP----------DAVKLWRNLTYFGALPCCALVGVYVYLEHQ 56
Q+++R T+ A+ S P + LW+ F +P AL V +E
Sbjct: 7 QLLLRNIYTNRAVLDSLKEPLKVEGISKYAETASLWKKTFIFACIPILALCTFSVMIE-- 64
Query: 57 AEEEHHVRPEFVKREYLYIRNRN 79
EH RPEFVK YL IR +
Sbjct: 65 ---EHPERPEFVKYSYLRIRKKK 84
>gi|350537313|ref|NP_001233186.1| cytochrome c oxidase subunit 6A1, mitochondrial [Taeniopygia
guttata]
gi|197128999|gb|ACH45497.1| putative cytochrome c oxidase subunit VIa polypeptide 1
[Taeniopygia guttata]
gi|197129005|gb|ACH45503.1| putative cytochrome c oxidase subunit VIa polypeptide 1
[Taeniopygia guttata]
gi|197129008|gb|ACH45506.1| putative cytochrome c oxidase subunit VIa polypeptide 1
[Taeniopygia guttata]
Length = 108
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 30 KLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYIRNR 78
++W+ LT+ ALP A+ + YL+ Q HH RPEFV +L IR +
Sbjct: 37 RMWKTLTFLVALPGVAVCMLNCYLKAQ---HHHERPEFVPYSHLRIRTK 82
>gi|284795350|ref|NP_001087350.2| cytochrome c oxidase subunit 6a polypeptide 1 [Xenopus laevis]
Length = 110
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 1 MAS--RLGQMMMRKFSTSPAMKSSAGNPD---AVKLWRNLTYFGALPCCALVGVYVYLEH 55
MAS RL ++ R + S+A + AV+ W+ L+Y ALP A+ + VYL+
Sbjct: 1 MASLGRLSGILRRSLPIRGRLFSAAAEQEHAGAVRTWKILSYVVALPGVAVCMLNVYLKM 60
Query: 56 QAEEEHHVRPEFVKREYLYIRNR 78
Q H PEF+ E+L IR +
Sbjct: 61 QHHS--HENPEFIPYEHLRIRTK 81
>gi|198475974|ref|XP_002132232.1| GA25317 [Drosophila pseudoobscura pseudoobscura]
gi|198137490|gb|EDY69634.1| GA25317 [Drosophila pseudoobscura pseudoobscura]
Length = 221
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 20 KSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYIRNRN 79
K S + +KLWR+++ F LP A++ + V+ H+ E EH PEFV ++Y R +
Sbjct: 97 KESTHSGGGMKLWRSISLFAVLPMVAILTLLVFSTHK-EHEH---PEFVYYPFMYKRTKT 152
>gi|403276822|ref|XP_003930082.1| PREDICTED: cytochrome c oxidase subunit 6A2, mitochondrial-like
[Saimiri boliviensis boliviensis]
Length = 96
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Query: 8 MMMRKFSTSPAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEF 67
+ +R S A + G+ A + WR LT+ ALP AL + YL H RPEF
Sbjct: 3 LPLRPLSRGLASAAKEGHGGAGRTWRLLTFVLALPSVALCTLNAYL----HSGHRPRPEF 58
Query: 68 VKREYLYIRNR 78
+ +L IR +
Sbjct: 59 IAYPHLRIRTK 69
>gi|341889608|gb|EGT45543.1| hypothetical protein CAEBREN_09745 [Caenorhabditis brenneri]
Length = 129
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 24 GNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYIRNR 78
N +A + W+ + Y ++PC AL + +H+ H RPE V+ +L +RN+
Sbjct: 43 ANQNASETWKKIFYIASIPCLALTMYAAFKDHKKHMSHE-RPEHVEYAFLNVRNK 96
>gi|308485615|ref|XP_003105006.1| CRE-TAG-174 protein [Caenorhabditis remanei]
gi|308257327|gb|EFP01280.1| CRE-TAG-174 protein [Caenorhabditis remanei]
Length = 128
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 25 NPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYIRNR 78
N +A + W+ + Y ++PC AL + +H+ H RPE V+ +L +RN+
Sbjct: 44 NQNASETWKKIFYIASIPCLALTMYAAFKDHKKHMSHE-RPEHVEYAFLNVRNK 96
>gi|403158109|ref|XP_003307448.2| hypothetical protein PGTG_00398 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375163683|gb|EFP74442.2| hypothetical protein PGTG_00398 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 127
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 11/71 (15%)
Query: 18 AMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVY---------LEHQAEEEHHVRPEFV 68
A+KS A + + +LWR +TY+ A P L V Y LEH EE PE +
Sbjct: 40 AIKSHAAS--SSELWRKITYYVAFPSIVLALVNAYNLAKEHEHHLEHIKEENGGELPERI 97
Query: 69 KREYLYIRNRN 79
+YL IRN++
Sbjct: 98 HYDYLNIRNKS 108
>gi|170035890|ref|XP_001845799.1| cytochrome c oxidase, subunit VIA [Culex quinquefasciatus]
gi|167878398|gb|EDS41781.1| cytochrome c oxidase, subunit VIA [Culex quinquefasciatus]
Length = 119
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 30 KLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYIRNR 78
K W+ L+ F ALP AL AEE H RPEFV E+L IR +
Sbjct: 35 KTWKQLSLFVALPAVALAMANAISSVTAEE--HERPEFVPYEHLRIRTK 81
>gi|197128998|gb|ACH45496.1| putative cytochrome c oxidase subunit VIa polypeptide 1
[Taeniopygia guttata]
Length = 108
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 30 KLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYIRNR 78
++W+ LT+ ALP A+ + YL+ Q HH RPEFV +L IR +
Sbjct: 37 RMWKTLTFVVALPGVAVCMLNCYLKAQ---HHHERPEFVPYSHLRIRTK 82
>gi|197128987|gb|ACH45485.1| putative cytochrome c oxidase subunit VIa polypeptide 1
[Taeniopygia guttata]
gi|197128988|gb|ACH45486.1| putative cytochrome c oxidase subunit VIa polypeptide 1
[Taeniopygia guttata]
gi|197128989|gb|ACH45487.1| putative cytochrome c oxidase subunit VIa polypeptide 1
[Taeniopygia guttata]
gi|197128990|gb|ACH45488.1| putative cytochrome c oxidase subunit VIa polypeptide 1
[Taeniopygia guttata]
gi|197128991|gb|ACH45489.1| putative cytochrome c oxidase subunit VIa polypeptide 1
[Taeniopygia guttata]
gi|197128992|gb|ACH45490.1| putative cytochrome c oxidase subunit VIa polypeptide 1
[Taeniopygia guttata]
gi|197128996|gb|ACH45494.1| putative cytochrome c oxidase subunit VIa polypeptide 1
[Taeniopygia guttata]
gi|197129000|gb|ACH45498.1| putative cytochrome c oxidase subunit VIa polypeptide 1
[Taeniopygia guttata]
gi|197129001|gb|ACH45499.1| putative cytochrome c oxidase subunit VIa polypeptide 1
[Taeniopygia guttata]
gi|197129002|gb|ACH45500.1| putative cytochrome c oxidase subunit VIa polypeptide 1
[Taeniopygia guttata]
gi|197129003|gb|ACH45501.1| putative cytochrome c oxidase subunit VIa polypeptide 1
[Taeniopygia guttata]
gi|197129004|gb|ACH45502.1| putative cytochrome c oxidase subunit VIa polypeptide 1
[Taeniopygia guttata]
gi|197129006|gb|ACH45504.1| putative cytochrome c oxidase subunit VIa polypeptide 1
[Taeniopygia guttata]
gi|197129007|gb|ACH45505.1| putative cytochrome c oxidase subunit VIa polypeptide 1
[Taeniopygia guttata]
Length = 108
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 30 KLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYIRNR 78
++W+ LT+ ALP A+ + YL+ Q HH RPEFV +L IR +
Sbjct: 37 RMWKTLTFVVALPGVAVCMLNCYLKAQ---HHHERPEFVPYSHLRIRTK 82
>gi|281351909|gb|EFB27493.1| hypothetical protein PANDA_007208 [Ailuropoda melanoleuca]
Length = 108
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 3 SRLGQMMMRKFSTSPAMKSSA--GNPDAVKLWRNLTYFGALPCCALVGVYVYLE-HQAEE 59
SRL ++ R + SS G + W+ LTYF ALP + + V+L+ H E
Sbjct: 6 SRLSGLLGRPGAQLGRSTSSGAHGEEGSACTWKALTYFVALPGVGVSMLNVFLKSHHGEH 65
Query: 60 EHHVRPEFVKREYLYIRNR 78
E RPEFV +L IR++
Sbjct: 66 E---RPEFVAYPHLRIRSK 81
>gi|301766568|ref|XP_002918711.1| PREDICTED: cytochrome c oxidase subunit 6A1, mitochondrial-like
[Ailuropoda melanoleuca]
Length = 111
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 3 SRLGQMMMRKFSTSPAMKSSA--GNPDAVKLWRNLTYFGALPCCALVGVYVYLE-HQAEE 59
SRL ++ R + SS G + W+ LTYF ALP + + V+L+ H E
Sbjct: 9 SRLSGLLGRPGAQLGRSTSSGAHGEEGSACTWKALTYFVALPGVGVSMLNVFLKSHHGEH 68
Query: 60 EHHVRPEFVKREYLYIRNR 78
E RPEFV +L IR++
Sbjct: 69 E---RPEFVAYPHLRIRSK 84
>gi|50756677|ref|XP_415270.1| PREDICTED: cytochrome c oxidase subunit 6A1, mitochondrial
[Gallus gallus]
Length = 108
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 21 SSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYIRNR 78
S+A +LW+ L++ ALP + + YL+ Q E E RPEF++ +L IR++
Sbjct: 26 SAAHEGGGARLWKTLSFVVALPAVGVCMLNCYLKAQHEHE---RPEFIRYAHLRIRSK 80
>gi|327282644|ref|XP_003226052.1| PREDICTED: cytochrome c oxidase subunit 6A1, mitochondrial-like
[Anolis carolinensis]
Length = 144
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 1 MASRLGQMMMRKFSTSPAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEE 60
+A+ Q +R+F ++ A G+ + W+ L++ ALP A+ + YL+ Q E
Sbjct: 45 VAAPAPQAGLRRFLSATAGHGEGGS---ARTWKILSFVVALPGVAVCMLNCYLKAQHE-- 99
Query: 61 HHVRPEFVKREYLYIRNR 78
H RPEF+ +L IR +
Sbjct: 100 -HERPEFIPYSHLRIRTK 116
>gi|324521446|gb|ADY47857.1| Cytochrome c oxidase subunit 6A [Ascaris suum]
Length = 132
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 10/76 (13%)
Query: 3 SRLGQMMMRKFSTSPAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHH 62
+ G+ + ++ T+ A K + W+ + ++ ++PC AL Y +HQ +
Sbjct: 35 DQFGKGLNQQLKTAEATKQT---------WKKIFFWCSIPCLALTMYAAYADHQ-KHRSK 84
Query: 63 VRPEFVKREYLYIRNR 78
RPE+V+ YL +RN+
Sbjct: 85 PRPEYVEYPYLNVRNK 100
>gi|162817|gb|AAA30437.1| cytochrome c oxidase subunit VIa, partial [Bos taurus]
gi|228239|prf||1801237A cytochrome c oxidase:SUBUNIT=VIa
Length = 85
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 24 GNPDAVKLWRNLTYFGALPCCALVGVYVYLE-HQAEEEHHVRPEFVKREYLYIRNR 78
G + ++W+ LT F ALP + + V+++ H EEE RPEFV +L IR++
Sbjct: 6 GEEGSARMWKALTLFVALPGVGVSMLNVFMKSHHGEEE---RPEFVAYPHLRIRSK 58
>gi|442749233|gb|JAA66776.1| Putative cytochrome c oxidase subunit via/cox13 [Ixodes ricinus]
Length = 76
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 32/74 (43%), Gaps = 5/74 (6%)
Query: 1 MASRLGQMMMRKFSTSP---AMKSSAGNP--DAVKLWRNLTYFGALPCCALVGVYVYLEH 55
MAS +R FS+S A AGN A K+WRNLT+F A P L + YL
Sbjct: 1 MASMNFAQFLRYFSSSAIRYAKPGEAGNAHFAAQKMWRNLTFFVAFPAIGLCALNAYLAE 60
Query: 56 QAEEEHHVRPEFVK 69
Q P K
Sbjct: 61 QDTTTRLTYPTRTK 74
>gi|351694667|gb|EHA97585.1| Cytochrome c oxidase subunit 6A1, mitochondrial [Heterocephalus
glaber]
Length = 86
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 21 SSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYIRNR 78
+ G + +W+ LTYF ALP + + V+L+ + EE RPEF+ +L IR +
Sbjct: 4 GTHGEQGSAHMWKPLTYFVALPGVGVSMLNVFLKSRHGEEE--RPEFIAYPHLRIRTK 59
>gi|149618312|ref|XP_001510407.1| PREDICTED: cytochrome c oxidase subunit 6A1, mitochondrial-like,
partial [Ornithorhynchus anatinus]
Length = 75
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 30 KLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYIRNR 78
++W+ LTYF ALP + + YL+ Q + H RPEF+ +L IR++
Sbjct: 1 RMWKLLTYFVALPGVGISMLNAYLKEQ-QHSGHERPEFIPYTHLRIRSK 48
>gi|308322101|gb|ADO28188.1| mitochondrial cytochrome c oxidase subunit 6a1 [Ictalurus
furcatus]
Length = 109
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 4 RLGQMMMRKFS---TSPAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEE 60
R Q ++R S T ++A K W+ LT+ ALP + + +L +A+
Sbjct: 6 RFSQTLLRSVSAVQTRQLSAAAAHGEQGSKTWKLLTFLVALPGVGVCMLNTFL--KAQHH 63
Query: 61 HHVRPEFVKREYLYIRNR 78
H RPEF+ +L IR++
Sbjct: 64 SHERPEFIPYTHLRIRSK 81
>gi|268576208|ref|XP_002643084.1| C. briggsae CBR-TAG-174 protein [Caenorhabditis briggsae]
Length = 128
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 25 NPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYIRNR 78
N A + W+ + Y ++PC AL + +H+ H RPE V+ +L +RN+
Sbjct: 44 NHSASETWKKIFYIASIPCLALTMYAAFKDHKKHMSHE-RPEHVEYAFLNVRNK 96
>gi|432874947|ref|XP_004072598.1| PREDICTED: cytochrome c oxidase subunit 6A, mitochondrial-like
[Oryzias latipes]
Length = 118
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 28 AVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYIRNR 78
+ K W+ LT+ ALP A+ + +L+ Q E H +PEFV +L IR++
Sbjct: 41 SAKTWKILTFIVALPGVAVCMLNTFLKEQHHE--HTQPEFVPYSHLRIRSK 89
>gi|85112355|ref|XP_964326.1| hypothetical protein NCU01962 [Neurospora crassa OR74A]
gi|28926104|gb|EAA35090.1| hypothetical protein NCU01962 [Neurospora crassa OR74A]
gi|336463553|gb|EGO51793.1| hypothetical protein NEUTE1DRAFT_118541 [Neurospora tetrasperma
FGSC 2508]
Length = 136
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 16/89 (17%)
Query: 7 QMMMRKFSTSPAMKSSAG----NPDAVK--------LWRNLTYFGALPCCALVGVYVYLE 54
Q + R+F+++PA +S +AVK LWR ++ +G P AL G Y
Sbjct: 23 QTVQRRFASTPANESGKNAFVREREAVKQHAAETTELWRKISLYGIPPALALAGYNAYTL 82
Query: 55 HQAEEEH--HVRPEFVKREYLY--IRNRN 79
+ EH H+ P + EY Y IR RN
Sbjct: 83 YNEHWEHWSHLPPLEERTEYPYQNIRTRN 111
>gi|449281599|gb|EMC88646.1| Cytochrome c oxidase subunit 6A1, mitochondrial, partial [Columba
livia]
Length = 73
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 30 KLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYIRNR 78
+LW+ LT+ ALP A+ + YL+ Q E E RPEFV +L IR +
Sbjct: 2 RLWKTLTFVVALPGVAVCMLNCYLKAQHEHE---RPEFVPYAHLRIRTK 47
>gi|195146602|ref|XP_002014273.1| GL19037 [Drosophila persimilis]
gi|194106226|gb|EDW28269.1| GL19037 [Drosophila persimilis]
Length = 226
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 16 SPAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYI 75
+P + + +K WRN++ F LP ++ V V+ H+ H PEFV ++Y
Sbjct: 47 NPPKEKEPAHGGGMKRWRNISLFAVLPLVVILTVLVFSTHK----EHEHPEFVYFPFMYK 102
Query: 76 RNR 78
R +
Sbjct: 103 RTK 105
>gi|198475972|ref|XP_002132231.1| GA25318 [Drosophila pseudoobscura pseudoobscura]
gi|198137489|gb|EDY69633.1| GA25318 [Drosophila pseudoobscura pseudoobscura]
Length = 226
Score = 38.1 bits (87), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Query: 16 SPAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYI 75
+P + + +K WRN++ F LP ++ V V+ H+ H PEFV ++Y
Sbjct: 47 NPPKEKEPAHGGGMKRWRNISLFAVLPLVVILTVLVFSTHK----EHEHPEFVYFPFMYK 102
Query: 76 RNR 78
R +
Sbjct: 103 RTK 105
>gi|322782944|gb|EFZ10662.1| hypothetical protein SINV_07313 [Solenopsis invicta]
Length = 114
Score = 37.7 bits (86), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 5/50 (10%)
Query: 31 LWRNLTYFGALPCCALVGVYVYLEHQAEEEHH--VRPEFVKREYLYIRNR 78
LW+ L++F P L V YL HQA HH RPEF+ +++ +R +
Sbjct: 42 LWKRLSFFVGFPAICLAMVNCYLNHQA---HHGDERPEFIAYDHMRVRTK 88
>gi|52345674|ref|NP_001004884.1| cytochrome c oxidase subunit VIa polypeptide 2 [Xenopus
(Silurana) tropicalis]
gi|49670632|gb|AAH75281.1| MGC88918 protein [Xenopus (Silurana) tropicalis]
Length = 105
Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 1 MASRLGQMMMRKFSTSPAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEE 60
+ +R+ +M R+ S A + A A + W+ L++ ALP A+ + +L+ Q
Sbjct: 4 LGARMSSLMFRRQMASEAHEEGA---KAARTWKILSFTVALPGVAVCMLNAWLKKQHHP- 59
Query: 61 HHVRPEFVKREYLYIRNR 78
H RP+FV ++L IR +
Sbjct: 60 -HERPKFVAYDHLRIRTK 76
>gi|332030527|gb|EGI70215.1| Cytochrome c oxidase subunit 6A1, mitochondrial [Acromyrmex
echinatior]
Length = 166
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 25 NPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYIRNR 78
+P V WR L F ALP A+ +Y +HQ EE R F YLY R +
Sbjct: 75 DPRKVIFWRMLCLFVALPIVAITSAIIYTQHQ-EEAKKPREPFQNLPYLYRRTK 127
>gi|307185713|gb|EFN71629.1| Cytochrome c oxidase polypeptide 6A1, mitochondrial [Camponotus
floridanus]
Length = 70
Score = 37.7 bits (86), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Query: 10 MRKFSTSPAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVK 69
+ ++ + + + ++ LW+ +++F +P L + YL HQA RPEFV
Sbjct: 1 INEYYITVILVCTYLTEQSLLLWKRISFFVGVPAICLAMLNCYLNHQAHHNDE-RPEFVA 59
Query: 70 REYLYIRNR 78
E++ IR +
Sbjct: 60 YEHMRIRTK 68
>gi|149248024|ref|XP_001528399.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146448353|gb|EDK42741.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 133
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 10/76 (13%)
Query: 4 RLGQMMMRKFSTSPAMKSSAGNPDAVKLWRNLTYFGALPCCALVGV---YVYLEHQAEEE 60
+LG+ M+++ T N LW+ LTYF A+P LV + V +EH E
Sbjct: 34 KLGEQFMKQYETKVHHSEGITN-----LWKKLTYFVAIPAILLVAIPVGKVEMEHAKHRE 88
Query: 61 H--HVRPEFVKREYLY 74
H H+ E ++Y Y
Sbjct: 89 HQRHMSDEEWPQQYEY 104
>gi|197128993|gb|ACH45491.1| putative cytochrome c oxidase subunit VIa polypeptide 1
[Taeniopygia guttata]
gi|197128997|gb|ACH45495.1| putative cytochrome c oxidase subunit VIa polypeptide 1
[Taeniopygia guttata]
Length = 71
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 31 LWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYIRNR 78
+W+ LT+ ALP A+ + YL+ Q HH RPEFV +L IR +
Sbjct: 1 MWKTLTFVVALPGVAVCMLNCYLKAQ---HHHERPEFVPYSHLRIRTK 45
>gi|326929962|ref|XP_003211122.1| PREDICTED: cytochrome c oxidase subunit 6A1, mitochondrial
[Meleagris gallopavo]
Length = 119
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 5 LGQMMMRKFSTSPAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVR 64
L Q M R + P +K + +LW+ L++ ALP + + YL+ Q + E R
Sbjct: 24 LRQRMRR---SVPQLKVRQAVAEHSRLWKTLSFVVALPAVGVCMLNCYLKAQHKHE---R 77
Query: 65 PEFVKREYLYIRNR 78
PEF++ +L IR +
Sbjct: 78 PEFIRYAHLRIRTK 91
>gi|340712271|ref|XP_003394685.1| PREDICTED: cytochrome c oxidase subunit 6A1, mitochondrial-like
[Bombus terrestris]
Length = 113
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 27 DAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYIRNR 78
D VK+++ +TYF +P + V Y++ EE H PEF++ Y+ I N+
Sbjct: 35 DTVKIFKLITYFVGIPLLGVSMVNCYIK-VLEENHEPAPEFIQYPYMKIMNK 85
>gi|348584368|ref|XP_003477944.1| PREDICTED: cytochrome c oxidase subunit 6A2, mitochondrial-like
[Cavia porcellus]
Length = 96
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Query: 7 QMMMRKFSTSPAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPE 66
+ + R F++ A K G A + WR LT+ ALP AL + +L H RPE
Sbjct: 6 RALSRGFAS--AAKGDHGGTGA-RTWRTLTFLLALPSVALCTLNAWL----HSSHSERPE 58
Query: 67 FVKREYLYIRNR 78
F+ +L IR +
Sbjct: 59 FIPYHHLRIRTK 70
>gi|195376147|ref|XP_002046858.1| GJ13119 [Drosophila virilis]
gi|194154016|gb|EDW69200.1| GJ13119 [Drosophila virilis]
Length = 311
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Query: 30 KLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYIRNR 78
K W+ ++ G LP A++ V V+ H+ EE RPE+ +LY+R +
Sbjct: 112 KKWQKISLMGGLPLIAILTVLVFTSHKEEE----RPEYRHWSHLYLRGK 156
>gi|336264662|ref|XP_003347107.1| hypothetical protein SMAC_05406 [Sordaria macrospora k-hell]
gi|380093802|emb|CCC08766.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 136
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 16/89 (17%)
Query: 7 QMMMRKFSTSPAMKSSAG----NPDAVK--------LWRNLTYFGALPCCALVGVYVYLE 54
Q + R+F+++PA + +AVK LWR ++ +G P AL G Y
Sbjct: 23 QTVQRRFASTPATGTGKNAFVREREAVKQHAAETTELWRKISLYGIPPALALAGYNAYTL 82
Query: 55 HQAEEEH--HVRPEFVKREYLY--IRNRN 79
+ EH H+ P + EY Y IR RN
Sbjct: 83 YNEHWEHWSHLPPLEERTEYPYQNIRTRN 111
>gi|17553574|ref|NP_498082.1| Protein TAG-174 [Caenorhabditis elegans]
gi|2493854|sp|Q20779.1|COX6A_CAEEL RecName: Full=Probable cytochrome c oxidase subunit 6A,
mitochondrial; AltName: Full=Cytochrome c oxidase
polypeptide VIa; Flags: Precursor
gi|351059826|emb|CCD67407.1| Protein TAG-174 [Caenorhabditis elegans]
Length = 128
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 27 DAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYIRNR 78
+A + W+ + + ++PC AL + +H+ H RPE V+ +L +RN+
Sbjct: 46 NASETWKKIFFIASIPCLALTMYAAFKDHKKHMSHE-RPEHVEYAFLNVRNK 96
>gi|308324401|gb|ADO29335.1| mitochondrial cytochrome c oxidase subunit 6a1 [Ictalurus
punctatus]
Length = 109
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 5/78 (6%)
Query: 4 RLGQMMMRKFS---TSPAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEE 60
R Q ++R S T ++A K W+ LT+ ALP + + +L +A+
Sbjct: 6 RFSQTLLRSVSAVQTRQLSAAAAHGEQGSKTWKLLTFLVALPGVGVCMLNTFL--KAQHH 63
Query: 61 HHVRPEFVKREYLYIRNR 78
H +PEF+ +L IR++
Sbjct: 64 SHEQPEFIPYTHLRIRSK 81
>gi|51593516|gb|AAH78597.1| MGC85529 protein [Xenopus laevis]
Length = 97
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 4 RLGQMMMRKFSTSPAMKSSAGNPD---AVKLWRNLTYFGALPCCALVGVYVYLEHQAEEE 60
RL ++ R + S+A + AV+ W+ L+Y ALP A+ + VYL+ Q
Sbjct: 6 RLSGILRRSLPIRGRLFSAAAEQEHAGAVRTWKILSYVVALPGVAVCMLNVYLKMQ--HH 63
Query: 61 HHVRPEFVKREYLYIRNRN 79
H PEF+ E+L R+
Sbjct: 64 SHENPEFIPYEHLRSAQRD 82
>gi|195126038|ref|XP_002007481.1| GI12974 [Drosophila mojavensis]
gi|193919090|gb|EDW17957.1| GI12974 [Drosophila mojavensis]
Length = 218
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 31 LWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYIRNR 78
+W+ +T ALP A++ V V H H RPEF K ++Y+R +
Sbjct: 1 MWQRITLMCALPLIAILSVLVLTGHH----EHERPEFKKWGHMYVRTK 44
>gi|345798213|ref|XP_003434412.1| PREDICTED: cytochrome c oxidase subunit 6A1, mitochondrial-like
[Canis lupus familiaris]
Length = 192
Score = 36.2 bits (82), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 28 AVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYIRN 77
+ + W+ LTYF ALP + + +L+ E H RPEF+ +L+IR+
Sbjct: 117 SARTWKALTYFVALPSVGVSMLNRFLKLHHRE--HKRPEFIAYPHLHIRS 164
>gi|475705|gb|AAA17835.1| cytochrome c oxidase subunit VIaH [Mus musculus]
Length = 97
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Query: 14 STSPAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYL 73
S + A K G A WR LT+ ALP AL + ++ HH RPEF+ +L
Sbjct: 11 SMASAAKGDHGGAGA-NTWRLLTFVLALPSVALCSLNCWMH----AGHHERPEFIPYHHL 65
Query: 74 YIRNR 78
IR +
Sbjct: 66 RIRTK 70
>gi|158517820|ref|NP_036944.2| cytochrome c oxidase subunit 6A2, mitochondrial precursor [Rattus
norvegicus]
gi|149067639|gb|EDM17191.1| cytochrome c oxidase, subunit VIa, polypeptide 2, isoform CRA_a
[Rattus norvegicus]
Length = 97
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Query: 14 STSPAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYL 73
S + A K G A WR LT+ ALP AL + ++ HH RPEF+ +L
Sbjct: 11 SMASASKGDHGGAGA-NTWRLLTFVLALPSVALCSLNCWMH----AGHHERPEFIPYHHL 65
Query: 74 YIRNR 78
IR +
Sbjct: 66 RIRTK 70
>gi|351702217|gb|EHB05136.1| Cytochrome c oxidase subunit 6A1, mitochondrial, partial
[Heterocephalus glaber]
Length = 76
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 28 AVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYIRNR 78
++W+ LTYF ALP + + V+L+ + +E RPEF+ +L IR +
Sbjct: 1 TARMWKALTYFVALPGVGVSMLNVFLKSRHGKEE--RPEFIAYPHLRIRTK 49
>gi|395816130|ref|XP_003781564.1| PREDICTED: cytochrome c oxidase subunit 6A1, mitochondrial-like
[Otolemur garnettii]
Length = 136
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 30 KLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYIRNR 78
++WR LT+F LP + + VYL+ + E H RPEF+ +L IR +
Sbjct: 35 RMWRALTFFVTLPRVGVSMLNVYLKSRQGE--HERPEFIPYCHLRIRTK 81
>gi|322696796|gb|EFY88583.1| cytochrome c oxidase subunit VIa, putative [Metarhizium acridum
CQMa 102]
Length = 129
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 26/104 (25%)
Query: 1 MASRLGQMMMRKFST---SPAMK----SSAGN-------------PDAVKLWRNLTYFGA 40
+ASRL +F+T +PA + +SA N + +LW+ ++ +G
Sbjct: 2 LASRLVTRNASRFATQLRAPAQRRLASTSAENEFIKERQHIKEHAKETTELWKKISIYGV 61
Query: 41 LPCCALVGV---YVYLEHQAEEEHHVRPEFVKREYLY--IRNRN 79
+PC AL G Y++ EH E H+ P + EY Y IR +N
Sbjct: 62 IPCLALAGANAWYLWKEHW-EHWSHMPPLEERTEYPYQNIRTKN 104
>gi|291387223|ref|XP_002710446.1| PREDICTED: cytochrome c oxidase subunit VIa polypeptide 1-like
[Oryctolagus cuniculus]
Length = 108
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Query: 2 ASRLGQMMMRKFSTSPAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEH 61
S + Q++ R P + GN + + YF L + VYL+ EE
Sbjct: 7 GSMVSQLLGRSCLCRPMSSGTHGNEGSAPKQKAPNYFVKLCSMGESMLNVYLKSHHEE-- 64
Query: 62 HVRPEFVKREYLYIRNR 78
H RPEF+ YL+IR+R
Sbjct: 65 HWRPEFIAYHYLHIRSR 81
>gi|326433427|gb|EGD78997.1| cytochrome c oxidase polypeptide VIa [Salpingoeca sp. ATCC 50818]
Length = 157
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 6/47 (12%)
Query: 32 WRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYIRNR 78
+RN++ F A+P C L+G ++ AE EH PEFV EY ++R R
Sbjct: 86 YRNISLFVAIPACLLIGFKSFV--LAEHEH--APEFV--EYDHLRKR 126
>gi|83816956|ref|NP_034073.2| cytochrome c oxidase subunit 6A2, mitochondrial precursor [Mus
musculus]
gi|2506313|sp|P43023.2|CX6A2_MOUSE RecName: Full=Cytochrome c oxidase subunit 6A2, mitochondrial;
AltName: Full=Cytochrome c oxidase polypeptide
VIa-heart; Short=COXVIAH; Flags: Precursor
gi|1015972|gb|AAC52280.1| cytochrome C oxidase VIa heart isoform [Mus musculus]
gi|1813482|gb|AAB41683.1| cytochrome C oxidase subunit VIa heart isoform [Mus musculus]
gi|12832540|dbj|BAB22151.1| unnamed protein product [Mus musculus]
gi|148685689|gb|EDL17636.1| cytochrome c oxidase, subunit VI a, polypeptide 2 [Mus musculus]
Length = 97
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Query: 14 STSPAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYL 73
S + A K G A WR LT+ ALP AL + ++ HH RPEF+ +L
Sbjct: 11 SMASAAKGDHGGAGA-NTWRLLTFVLALPGVALCSLNCWMH----AGHHERPEFIPYHHL 65
Query: 74 YIRNR 78
IR +
Sbjct: 66 RIRTK 70
>gi|1352170|sp|P10817.3|CX6A2_RAT RecName: Full=Cytochrome c oxidase subunit 6A2, mitochondrial;
AltName: Full=Cytochrome c oxidase polypeptide
VIa-heart; Short=COXVIAH; Flags: Precursor
Length = 94
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Query: 14 STSPAMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYL 73
S + A K G A WR LT+ ALP AL + ++ HH RPEF+ +L
Sbjct: 8 SMASASKGDHGGAGA-NTWRLLTFVLALPSVALCSLNCWMH----AGHHERPEFIPYHHL 62
Query: 74 YIRNR 78
IR +
Sbjct: 63 RIRTK 67
>gi|350405125|ref|XP_003487333.1| PREDICTED: cytochrome c oxidase subunit 6A1, mitochondrial-like
[Bombus impatiens]
Length = 113
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 27 DAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYIRNRN 79
D VK+++ +TYF +P + V Y++ EE H PEF+ Y+ + N+
Sbjct: 35 DTVKIFKFITYFVGVPLLGVAMVNCYIK-ILEESHEPAPEFIHYPYMKVMNKG 86
>gi|88705770|ref|ZP_01103479.1| copper homeostasis protein (lipoprotein) [Congregibacter
litoralis KT71]
gi|88699841|gb|EAQ96951.1| copper homeostasis protein (lipoprotein) [Congregibacter
litoralis KT71]
Length = 238
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 29/56 (51%)
Query: 20 KSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYI 75
+++ P A L ++ G LPC GV +L+ E H+R E+V RE+L +
Sbjct: 20 QAAGAEPSAFALEVPASFKGRLPCADCPGVLWHLDLWPERRFHLRREYVDREHLAV 75
>gi|296233354|ref|XP_002761982.1| PREDICTED: cytochrome c oxidase subunit 6A2, mitochondrial
[Callithrix jacchus]
Length = 97
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Query: 18 AMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYIRN 77
A K G A + WR LT+ ALP AL + YL H RPEF+ +L IR
Sbjct: 15 AAKEGHGGTGA-RTWRLLTFVLALPSVALCTLNAYL----HSGHRPRPEFIAYPHLRIRT 69
Query: 78 R 78
+
Sbjct: 70 K 70
>gi|47217580|emb|CAG02507.1| unnamed protein product [Tetraodon nigroviridis]
Length = 108
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 6/79 (7%)
Query: 4 RLGQMMMRKFSTSPAMKSSAGNPD----AVKLWRNLTYFGALPCCALVGVYVYLEHQAEE 59
+L ++++R T + SA + + K W+ L++ ALP A+ + +L+ Q+
Sbjct: 6 QLARVLLRSAVTQSRRQFSAAAAEHGEHSAKTWKILSFVVALPGVAVCMLNTFLKEQSHS 65
Query: 60 EHHVRPEFVKREYLYIRNR 78
H +PEFV +L IR++
Sbjct: 66 --HEQPEFVPYSHLRIRSK 82
>gi|55985|emb|CAA31068.1| unnamed protein product [Rattus norvegicus]
Length = 86
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 5/61 (8%)
Query: 18 AMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYIRN 77
A K G A WR LT+ ALP AL + ++ HH RPEF+ +L IR
Sbjct: 4 ASKGDHGGAGA-NTWRLLTFVLALPSVALCSLNCWMH----AGHHERPEFIPYHHLRIRT 58
Query: 78 R 78
+
Sbjct: 59 K 59
>gi|322709549|gb|EFZ01125.1| cytochrome c oxidase subunit VIa, putative [Metarhizium anisopliae
ARSEF 23]
Length = 129
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 27 DAVKLWRNLTYFGALPCCALVGV---YVYLEHQAEEEHHVRPEFVKREYLY--IRNRN 79
+ +LW+ ++ +G +PC AL G Y++ EH E H+ P + EY Y IR +N
Sbjct: 48 ETTELWKKISIYGVIPCLALAGANAWYLWKEHW-EHWSHMPPLEERIEYPYQNIRTKN 104
>gi|7670597|gb|AAF66165.1| cytochrome c oxidase subunit VIa [Meleagris gallopavo]
Length = 86
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 30 KLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYIRNR 78
+LW+ L++ ALP + + YL+ Q + E RPEF++ +L IR +
Sbjct: 13 RLWKTLSFVVALPAVGVCMLNCYLKAQHKHE---RPEFIRYAHLRIRTK 58
>gi|260835122|ref|XP_002612558.1| hypothetical protein BRAFLDRAFT_219549 [Branchiostoma floridae]
gi|229297936|gb|EEN68567.1| hypothetical protein BRAFLDRAFT_219549 [Branchiostoma floridae]
Length = 85
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 28 AVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEHHVRPEFVKREYLYIRNRN 79
+ LW+ ++ F ALP + + YL+ + E H RPEF +L IR++
Sbjct: 7 GMDLWKKMSVFIALPALTICMLNAYLK-EKEHHEHPRPEFQAYAHLRIRSKG 57
>gi|320592590|gb|EFX05020.1| cytochrome c oxidase subunit [Grosmannia clavigera kw1407]
Length = 124
Score = 34.7 bits (78), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Query: 18 AMKSSAGNPDAVKLWRNLTYFGALPCCALVGVYVYLEHQAEEEH--HVRPEFVKREYLY- 74
A+K AG + +LWR ++ +G +PC G+ Y H H+ P + EY Y
Sbjct: 36 AVKEHAG--ASAELWRKISIYGTIPCLIGAGINAYFLWNDHWNHWNHMPPLEERTEYSYQ 93
Query: 75 -IRNRN 79
IR RN
Sbjct: 94 NIRTRN 99
>gi|255724030|ref|XP_002546944.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240134835|gb|EER34389.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 137
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 7/59 (11%)
Query: 27 DAVKLWRNLTYFGALPCCALVGVYV------YLEHQAEEEHHVRPEF-VKREYLYIRNR 78
D KLWR LTY A+P LV + V + EH+ + H E+ + +Y IR++
Sbjct: 55 DITKLWRKLTYLVAIPAVLLVAIPVGKVELEHAEHRKHQAHMTDDEWPTQYDYQNIRSK 113
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.323 0.134 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,203,717,054
Number of Sequences: 23463169
Number of extensions: 40379035
Number of successful extensions: 111640
Number of sequences better than 100.0: 175
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 149
Number of HSP's that attempted gapping in prelim test: 111506
Number of HSP's gapped (non-prelim): 177
length of query: 79
length of database: 8,064,228,071
effective HSP length: 50
effective length of query: 29
effective length of database: 6,891,069,621
effective search space: 199841019009
effective search space used: 199841019009
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 69 (31.2 bits)