Your job contains 1 sequence.
>psy11091
MEAVTCVAPDVETLVHMWKLLCMLEGTIVNVPEKNSPRKLRGEMVQVDTTNILFVASGAY
NGLDRLISRRKNEKYLGFGAPSTESAGRRAASLADLANQSAAVSAEEDNKEKDAFLKQVE
ARDLIDFGMIPEFVGRFPILVPFHSLNQELLVRILTEPKNAMIQQYQILFTMDKVDLTFS
PEALQAIARLALEKKTGARGLRAIMESLLLDSMYEVPGSDILMVHITEDTVLKNTAPSYI
RGIVFLDEVDKIGAVPGIHQLRDVGGEGVQQGMLKVSALAAFGIVFLDEVDKIGAVPGIH
QLRDVGGEGVQQGMLKVSTSYLFYRYPNTGYLWYRYPNTGYIWYRYPNTGYIWYRYPNTG
YLWTSYPNTGYLWYRYPNTGCIWYRYPKTGYLWYRYPNTGYLWYRYSR
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy11091
(408 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-040912-143 - symbol:clpx "ClpX caseinolytic... 769 2.4e-76 1
UNIPROTKB|E1BX77 - symbol:CLPX "Uncharacterized protein" ... 763 1.0e-75 1
UNIPROTKB|F1NA92 - symbol:CLPX "Uncharacterized protein" ... 763 1.0e-75 1
UNIPROTKB|F1N155 - symbol:CLPX "Uncharacterized protein" ... 756 5.7e-75 1
UNIPROTKB|E2QSS3 - symbol:CLPX "Uncharacterized protein" ... 756 5.7e-75 1
UNIPROTKB|O76031 - symbol:CLPX "ATP-dependent Clp proteas... 756 5.7e-75 1
UNIPROTKB|F1SJL5 - symbol:CLPX "Uncharacterized protein" ... 756 5.7e-75 1
RGD|1304883 - symbol:Clpx "ClpX caseinolytic peptidase X ... 756 5.7e-75 1
UNIPROTKB|Q5U2U0 - symbol:Clpx "ATP-dependent Clp proteas... 756 5.7e-75 1
MGI|MGI:1346017 - symbol:Clpx "caseinolytic peptidase X (... 755 7.3e-75 1
FB|FBgn0038745 - symbol:CG4538 species:7227 "Drosophila m... 738 4.6e-73 1
WB|WBGene00008412 - symbol:D2030.2 species:6239 "Caenorha... 495 2.6e-47 1
TIGR_CMR|CHY_0326 - symbol:CHY_0326 "ATP-dependent Clp pr... 335 8.6e-45 2
TIGR_CMR|SPO_1004 - symbol:SPO_1004 "ATP-dependent Clp pr... 325 1.6e-43 2
UNIPROTKB|P0A6H1 - symbol:clpX "ClpX" species:83333 "Esch... 341 2.5e-43 2
TIGR_CMR|CJE_0324 - symbol:CJE_0324 "ATP-dependent Clp pr... 328 3.2e-43 2
TAIR|locus:2154257 - symbol:CLPX "CLP protease regulatory... 454 5.7e-43 1
TIGR_CMR|GSU_1791 - symbol:GSU_1791 "ATP-dependent Clp pr... 301 7.5e-42 2
UNIPROTKB|P0CAU2 - symbol:clpX "ATP-dependent Clp proteas... 299 7.5e-42 2
TIGR_CMR|NSE_0753 - symbol:NSE_0753 "ATP-dependent Clp pr... 320 1.5e-41 2
UNIPROTKB|P0A528 - symbol:clpX "ATP-dependent Clp proteas... 315 1.5e-41 2
TIGR_CMR|BA_4704 - symbol:BA_4704 "ATP-dependent Clp prot... 300 2.0e-41 2
TIGR_CMR|CBU_0739 - symbol:CBU_0739 "ATP-dependent Clp pr... 318 6.6e-41 2
TIGR_CMR|SO_1795 - symbol:SO_1795 "ATP-dependent Clp prot... 325 1.7e-40 2
TIGR_CMR|ECH_0900 - symbol:ECH_0900 "ATP-dependent Clp pr... 311 1.5e-39 2
TIGR_CMR|CPS_3784 - symbol:CPS_3784 "ATP-dependent Clp pr... 308 1.5e-39 2
UNIPROTKB|Q9KQS7 - symbol:clpX "ATP-dependent Clp proteas... 310 1.9e-39 2
TIGR_CMR|VC_1921 - symbol:VC_1921 "ATP-dependent Clp prot... 310 1.9e-39 2
WB|WBGene00019461 - symbol:K07A3.3 species:6239 "Caenorha... 419 2.9e-39 1
TAIR|locus:2006942 - symbol:AT1G33360 species:3702 "Arabi... 416 1.7e-38 1
TAIR|locus:2155446 - symbol:AT5G49840 species:3702 "Arabi... 406 1.2e-37 1
TIGR_CMR|APH_0969 - symbol:APH_0969 "ATP-dependent Clp pr... 297 4.8e-37 2
SGD|S000000431 - symbol:MCX1 "Mitochondrial matrix protei... 331 1.3e-29 1
ASPGD|ASPL0000057717 - symbol:AN0349 species:162425 "Emer... 272 9.1e-29 3
TIGR_CMR|CJE_0764 - symbol:CJE_0764 "heat shock protein H... 165 2.8e-09 2
TIGR_CMR|SPO_3882 - symbol:SPO_3882 "heat shock protein H... 153 9.6e-09 2
TIGR_CMR|CBU_2012 - symbol:CBU_2012 "heat shock protein H... 152 2.2e-08 2
TIGR_CMR|CHY_1790 - symbol:CHY_1790 "heat shock protein H... 152 5.0e-08 2
DICTYBASE|DDB_G0288593 - symbol:DDB_G0288593 "ATP-depende... 140 1.1e-07 2
TIGR_CMR|APH_1074 - symbol:APH_1074 "ATP-dependent Hsl pr... 146 1.2e-07 2
TIGR_CMR|ECH_0997 - symbol:ECH_0997 "heat shock protein H... 147 1.4e-07 2
TIGR_CMR|NSE_0177 - symbol:NSE_0177 "heat shock protein H... 148 1.5e-07 2
TIGR_CMR|SO_4163 - symbol:SO_4163 "heat shock protein Hsl... 139 7.7e-07 2
TIGR_CMR|CPS_4370 - symbol:CPS_4370 "heat shock protein H... 136 2.2e-06 2
UNIPROTKB|P43773 - symbol:hslU "ATP-dependent protease AT... 135 2.3e-06 2
UNIPROTKB|Q9KNQ7 - symbol:hslU "ATP-dependent protease AT... 134 2.9e-06 2
TIGR_CMR|VC_2674 - symbol:VC_2674 "protease HslVU, ATPase... 134 2.9e-06 2
WB|WBGene00007233 - symbol:C01G10.6 species:6239 "Caenorh... 113 6.0e-06 1
UNIPROTKB|P0A6H5 - symbol:hslU species:83333 "Escherichia... 131 6.2e-06 2
WB|WBGene00007240 - symbol:C01G10.15 species:6239 "Caenor... 105 4.4e-05 1
WB|WBGene00007232 - symbol:C01G10.5 species:6239 "Caenorh... 94 0.00068 1
>ZFIN|ZDB-GENE-040912-143 [details] [associations]
symbol:clpx "ClpX caseinolytic peptidase X homolog
(E. coli)" species:7955 "Danio rerio" [GO:0051082 "unfolded protein
binding" evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
ZFIN:ZDB-GENE-040912-143 GO:GO:0005524 GO:GO:0006457 GO:GO:0017111
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1219
HOGENOM:HOG000010093 KO:K03544 PANTHER:PTHR11262:SF4 CTD:10845
HOVERGEN:HBG004940 OrthoDB:EOG46DM2G EMBL:BC081643 IPI:IPI00494396
RefSeq:NP_001004581.1 UniGene:Dr.4306 ProteinModelPortal:Q66HW5
STRING:Q66HW5 GeneID:447842 KEGG:dre:447842 NextBio:20832363
ArrayExpress:Q66HW5 Bgee:Q66HW5 Uniprot:Q66HW5
Length = 610
Score = 769 (275.8 bits), Expect = 2.4e-76, P = 2.4e-76
Identities = 155/223 (69%), Positives = 183/223 (82%)
Query: 20 LLCMLEGTIVNVPEKNSPRKLRGEMVQVDTTNILFVASGAYNGLDRLISRRKNEKYLGFG 79
LL +LEGTIVNVPEKN+ RKLRGE VQVDTTNILFVASGA+NGLDR+ISRRKNEKYLGFG
Sbjct: 360 LLKLLEGTIVNVPEKNT-RKLRGETVQVDTTNILFVASGAFNGLDRIISRRKNEKYLGFG 418
Query: 80 APSTESAGRRAASLADLANQSAA-VSAEEDNKEKDAFLKQVEARDLIDFGMIPEFVGRFP 138
PS GRRAA+ ADLAN + V A + +EKD LK VEARDLI+FGMIPEFVGR P
Sbjct: 419 TPSNMGKGRRAAAAADLANTTGGEVDAVAEIEEKDRLLKHVEARDLIEFGMIPEFVGRLP 478
Query: 139 ILVPFHSLNQELLVRILTEPKNAMIQQYQILFTMDKVDLTFSPEALQAIARLALEKKTGA 198
++VP HSL++E LVRILTEP+NA++ QYQ LF+MDK +L +P+AL+AIARLALE+KTGA
Sbjct: 479 VVVPLHSLDEETLVRILTEPRNAVVPQYQALFSMDKCELNMTPDALRAIARLALERKTGA 538
Query: 199 RGLRAIMESLLLDSMYEVPGSDILMVHITEDTVLKNTAPSYIR 241
RGLR+IME LLLD M+EVP SDI+ V +++D V P YIR
Sbjct: 539 RGLRSIMEKLLLDPMFEVPHSDIVSVDVSKDVVQGKAPPQYIR 581
Score = 170 (64.9 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 32/36 (88%), Positives = 36/36 (100%)
Query: 241 RGIVFLDEVDKIGAVPGIHQLRDVGGEGVQQGMLKV 276
+GIVFLDEVDKIG+VPGIHQLRDVGGEGVQQG+LK+
Sbjct: 328 QGIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKL 363
Score = 169 (64.5 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 32/35 (91%), Positives = 35/35 (100%)
Query: 283 GIVFLDEVDKIGAVPGIHQLRDVGGEGVQQGMLKV 317
GIVFLDEVDKIG+VPGIHQLRDVGGEGVQQG+LK+
Sbjct: 329 GIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKL 363
>UNIPROTKB|E1BX77 [details] [associations]
symbol:CLPX "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006457 "protein folding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0051082
"unfolded protein binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR013093 Pfam:PF07724 SMART:SM00382 GO:GO:0005524
GO:GO:0006457 GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 PANTHER:PTHR11262:SF4 GeneTree:ENSGT00390000017625
EMBL:AADN02038940 IPI:IPI00820856 Ensembl:ENSGALT00000038419
ArrayExpress:E1BX77 Uniprot:E1BX77
Length = 617
Score = 763 (273.6 bits), Expect = 1.0e-75, P = 1.0e-75
Identities = 153/222 (68%), Positives = 181/222 (81%)
Query: 20 LLCMLEGTIVNVPEKNSPRKLRGEMVQVDTTNILFVASGAYNGLDRLISRRKNEKYLGFG 79
LL +LEGTIVNVPEKNS RKLRGE VQVDTTNILFVASGA+NGLDR+ISRRKNEKYLGFG
Sbjct: 368 LLKLLEGTIVNVPEKNS-RKLRGETVQVDTTNILFVASGAFNGLDRIISRRKNEKYLGFG 426
Query: 80 APSTESAGRRAASLADLANQSAAVSAEEDNKEKDAFLKQVEARDLIDFGMIPEFVGRFPI 139
PS GRRAA+ ADLAN S + ED +EKD L+ VEARDLI+FGMIPEFVGR P+
Sbjct: 427 TPSNMGKGRRAAAAADLANISGESNTHEDIEEKDRLLRHVEARDLIEFGMIPEFVGRLPV 486
Query: 140 LVPFHSLNQELLVRILTEPKNAMIQQYQILFTMDKVDLTFSPEALQAIARLALEKKTGAR 199
+VP HSL+++ LVRILTEP+NA++ QYQ LF+MDK +L + +AL+AIARLALE+KTGAR
Sbjct: 487 VVPLHSLDEKTLVRILTEPRNAVVPQYQALFSMDKCELNVTEDALKAIARLALERKTGAR 546
Query: 200 GLRAIMESLLLDSMYEVPGSDILMVHITEDTVLKNTAPSYIR 241
GLR+IME LLL+ M+EVP SDI+ V + +D V P YIR
Sbjct: 547 GLRSIMEKLLLEPMFEVPNSDIVCVEVDKDVVEGKKEPGYIR 588
Score = 170 (64.9 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 32/36 (88%), Positives = 36/36 (100%)
Query: 241 RGIVFLDEVDKIGAVPGIHQLRDVGGEGVQQGMLKV 276
+GIVFLDEVDKIG+VPGIHQLRDVGGEGVQQG+LK+
Sbjct: 336 QGIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKL 371
Score = 169 (64.5 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 32/35 (91%), Positives = 35/35 (100%)
Query: 283 GIVFLDEVDKIGAVPGIHQLRDVGGEGVQQGMLKV 317
GIVFLDEVDKIG+VPGIHQLRDVGGEGVQQG+LK+
Sbjct: 337 GIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKL 371
>UNIPROTKB|F1NA92 [details] [associations]
symbol:CLPX "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006457 "protein folding" evidence=IEA] [GO:0051082
"unfolded protein binding" evidence=IEA] [GO:0004176 "ATP-dependent
peptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0009841
"mitochondrial endopeptidase Clp complex" evidence=IEA] [GO:0016504
"peptidase activator activity" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA] [GO:0051603 "proteolysis
involved in cellular protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR013093
Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
GO:GO:0006457 GO:GO:0005743 GO:GO:0016504 GO:GO:0042645
GO:GO:0051603 GO:GO:0004176 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 OMA:KSIIKEP
GO:GO:0009841 GeneTree:ENSGT00390000017625 EMBL:AADN02038940
IPI:IPI00651275 Ensembl:ENSGALT00000011804 ArrayExpress:F1NA92
Uniprot:F1NA92
Length = 630
Score = 763 (273.6 bits), Expect = 1.0e-75, P = 1.0e-75
Identities = 153/222 (68%), Positives = 181/222 (81%)
Query: 20 LLCMLEGTIVNVPEKNSPRKLRGEMVQVDTTNILFVASGAYNGLDRLISRRKNEKYLGFG 79
LL +LEGTIVNVPEKNS RKLRGE VQVDTTNILFVASGA+NGLDR+ISRRKNEKYLGFG
Sbjct: 381 LLKLLEGTIVNVPEKNS-RKLRGETVQVDTTNILFVASGAFNGLDRIISRRKNEKYLGFG 439
Query: 80 APSTESAGRRAASLADLANQSAAVSAEEDNKEKDAFLKQVEARDLIDFGMIPEFVGRFPI 139
PS GRRAA+ ADLAN S + ED +EKD L+ VEARDLI+FGMIPEFVGR P+
Sbjct: 440 TPSNMGKGRRAAAAADLANISGESNTHEDIEEKDRLLRHVEARDLIEFGMIPEFVGRLPV 499
Query: 140 LVPFHSLNQELLVRILTEPKNAMIQQYQILFTMDKVDLTFSPEALQAIARLALEKKTGAR 199
+VP HSL+++ LVRILTEP+NA++ QYQ LF+MDK +L + +AL+AIARLALE+KTGAR
Sbjct: 500 VVPLHSLDEKTLVRILTEPRNAVVPQYQALFSMDKCELNVTEDALKAIARLALERKTGAR 559
Query: 200 GLRAIMESLLLDSMYEVPGSDILMVHITEDTVLKNTAPSYIR 241
GLR+IME LLL+ M+EVP SDI+ V + +D V P YIR
Sbjct: 560 GLRSIMEKLLLEPMFEVPNSDIVCVEVDKDVVEGKKEPGYIR 601
Score = 170 (64.9 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 32/36 (88%), Positives = 36/36 (100%)
Query: 241 RGIVFLDEVDKIGAVPGIHQLRDVGGEGVQQGMLKV 276
+GIVFLDEVDKIG+VPGIHQLRDVGGEGVQQG+LK+
Sbjct: 349 QGIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKL 384
Score = 169 (64.5 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 32/35 (91%), Positives = 35/35 (100%)
Query: 283 GIVFLDEVDKIGAVPGIHQLRDVGGEGVQQGMLKV 317
GIVFLDEVDKIG+VPGIHQLRDVGGEGVQQG+LK+
Sbjct: 350 GIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKL 384
>UNIPROTKB|F1N155 [details] [associations]
symbol:CLPX "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051603 "proteolysis involved in cellular protein
catabolic process" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=IEA] [GO:0016504 "peptidase activator activity"
evidence=IEA] [GO:0009841 "mitochondrial endopeptidase Clp complex"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] [GO:0051082 "unfolded protein binding"
evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR013093
Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
GO:GO:0006457 GO:GO:0005743 GO:GO:0016504 GO:GO:0042645
GO:GO:0051603 GO:GO:0004176 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 OMA:KSIIKEP
GO:GO:0009841 GeneTree:ENSGT00390000017625 EMBL:DAAA02027858
EMBL:DAAA02027859 EMBL:DAAA02027860 IPI:IPI00696713
Ensembl:ENSBTAT00000011038 Uniprot:F1N155
Length = 607
Score = 756 (271.2 bits), Expect = 5.7e-75, P = 5.7e-75
Identities = 151/222 (68%), Positives = 182/222 (81%)
Query: 20 LLCMLEGTIVNVPEKNSPRKLRGEMVQVDTTNILFVASGAYNGLDRLISRRKNEKYLGFG 79
LL +LEGTIVNVPEKNS RKLRGE VQVDTTNILFVASGA+NGLDR+ISRRKNEKYLGFG
Sbjct: 358 LLKLLEGTIVNVPEKNS-RKLRGETVQVDTTNILFVASGAFNGLDRIISRRKNEKYLGFG 416
Query: 80 APSTESAGRRAASLADLANQSAAVSAEEDNKEKDAFLKQVEARDLIDFGMIPEFVGRFPI 139
PS GRRAA+ ADLAN+S + +D +EKD L+ VEARDLI+FGMIPEFVGR P+
Sbjct: 417 TPSNLGKGRRAAAAADLANRSGESNTHQDIEEKDRLLRHVEARDLIEFGMIPEFVGRLPV 476
Query: 140 LVPFHSLNQELLVRILTEPKNAMIQQYQILFTMDKVDLTFSPEALQAIARLALEKKTGAR 199
+VP HSL+++ LV+ILTEP+NA+I QYQ LF+MDK +L + +AL+AIARLALE+KTGAR
Sbjct: 477 VVPLHSLDEKTLVQILTEPRNAVIPQYQALFSMDKCELNVTEDALKAIARLALERKTGAR 536
Query: 200 GLRAIMESLLLDSMYEVPGSDILMVHITEDTVLKNTAPSYIR 241
GLR+IME LLL+ M+EVP SDI+ V + ++ V P YIR
Sbjct: 537 GLRSIMEKLLLEPMFEVPNSDIVCVEVDKEVVEGKKEPGYIR 578
Score = 170 (64.9 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 32/36 (88%), Positives = 36/36 (100%)
Query: 241 RGIVFLDEVDKIGAVPGIHQLRDVGGEGVQQGMLKV 276
+GIVFLDEVDKIG+VPGIHQLRDVGGEGVQQG+LK+
Sbjct: 326 QGIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKL 361
Score = 169 (64.5 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 32/35 (91%), Positives = 35/35 (100%)
Query: 283 GIVFLDEVDKIGAVPGIHQLRDVGGEGVQQGMLKV 317
GIVFLDEVDKIG+VPGIHQLRDVGGEGVQQG+LK+
Sbjct: 327 GIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKL 361
>UNIPROTKB|E2QSS3 [details] [associations]
symbol:CLPX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051603 "proteolysis involved in cellular
protein catabolic process" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=IEA] [GO:0016504 "peptidase activator activity"
evidence=IEA] [GO:0009841 "mitochondrial endopeptidase Clp complex"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] [GO:0051082 "unfolded protein binding"
evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR013093
Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
GO:GO:0006457 GO:GO:0005743 GO:GO:0016504 GO:GO:0042645
GO:GO:0051603 GO:GO:0004176 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 KO:K03544 PANTHER:PTHR11262:SF4 CTD:10845 OMA:KSIIKEP
GO:GO:0009841 GeneTree:ENSGT00390000017625 EMBL:AAEX03016215
RefSeq:XP_852508.1 Ensembl:ENSCAFT00000027135 GeneID:609344
KEGG:cfa:609344 NextBio:20894946 Uniprot:E2QSS3
Length = 633
Score = 756 (271.2 bits), Expect = 5.7e-75, P = 5.7e-75
Identities = 151/222 (68%), Positives = 182/222 (81%)
Query: 20 LLCMLEGTIVNVPEKNSPRKLRGEMVQVDTTNILFVASGAYNGLDRLISRRKNEKYLGFG 79
LL +LEGTIVNVPEKNS RKLRGE VQVDTTNILFVASGA+NGLDR+ISRRKNEKYLGFG
Sbjct: 384 LLKLLEGTIVNVPEKNS-RKLRGETVQVDTTNILFVASGAFNGLDRIISRRKNEKYLGFG 442
Query: 80 APSTESAGRRAASLADLANQSAAVSAEEDNKEKDAFLKQVEARDLIDFGMIPEFVGRFPI 139
PS GRRAA+ ADLAN+S + +D +EKD L+ VEARDLI+FGMIPEFVGR P+
Sbjct: 443 TPSNLGKGRRAAAAADLANRSGESNTHQDIEEKDRLLRHVEARDLIEFGMIPEFVGRLPV 502
Query: 140 LVPFHSLNQELLVRILTEPKNAMIQQYQILFTMDKVDLTFSPEALQAIARLALEKKTGAR 199
+VP HSL+++ LV+ILTEP+NA+I QYQ LF+MDK +L + +AL+AIARLALE+KTGAR
Sbjct: 503 VVPLHSLDEKTLVQILTEPRNAVIPQYQALFSMDKCELNVTEDALKAIARLALERKTGAR 562
Query: 200 GLRAIMESLLLDSMYEVPGSDILMVHITEDTVLKNTAPSYIR 241
GLR+IME LLL+ M+EVP SDI+ V + ++ V P YIR
Sbjct: 563 GLRSIMEKLLLEPMFEVPNSDIVCVEVDKEVVEGKKEPGYIR 604
Score = 170 (64.9 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 32/36 (88%), Positives = 36/36 (100%)
Query: 241 RGIVFLDEVDKIGAVPGIHQLRDVGGEGVQQGMLKV 276
+GIVFLDEVDKIG+VPGIHQLRDVGGEGVQQG+LK+
Sbjct: 352 QGIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKL 387
Score = 169 (64.5 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 32/35 (91%), Positives = 35/35 (100%)
Query: 283 GIVFLDEVDKIGAVPGIHQLRDVGGEGVQQGMLKV 317
GIVFLDEVDKIG+VPGIHQLRDVGGEGVQQG+LK+
Sbjct: 353 GIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKL 387
>UNIPROTKB|O76031 [details] [associations]
symbol:CLPX "ATP-dependent Clp protease ATP-binding subunit
clpX-like, mitochondrial" species:9606 "Homo sapiens" [GO:0006457
"protein folding" evidence=IEA] [GO:0051082 "unfolded protein
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0009841 "mitochondrial endopeptidase Clp complex"
evidence=IDA] [GO:0016504 "peptidase activator activity"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=NAS;IDA]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0005743 "mitochondrial
inner membrane" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0004176 "ATP-dependent peptidase activity" evidence=IDA]
[GO:0051603 "proteolysis involved in cellular protein catabolic
process" evidence=IDA] [GO:0042645 "mitochondrial nucleoid"
evidence=IDA] [GO:0010952 "positive regulation of peptidase
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0006457 GO:GO:0005743
GO:GO:0046872 GO:GO:0016504 GO:GO:0016887 GO:GO:0042645
EMBL:CH471082 GO:GO:0051603 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 EMBL:AJ006267
EMBL:AJ276980 EMBL:AJ276981 EMBL:AJ276966 EMBL:AJ276967
EMBL:AJ276968 EMBL:AJ276969 EMBL:AJ276970 EMBL:AJ276971
EMBL:AJ276972 EMBL:AJ276973 EMBL:AJ276974 EMBL:AJ276975
EMBL:AJ276976 EMBL:AJ276977 EMBL:AK292316 EMBL:BC130373
EMBL:BC136487 IPI:IPI00008728 RefSeq:NP_006651.2 UniGene:Hs.113823
ProteinModelPortal:O76031 SMR:O76031 IntAct:O76031
MINT:MINT-3002168 STRING:O76031 PhosphoSite:O76031 PaxDb:O76031
PeptideAtlas:O76031 PRIDE:O76031 Ensembl:ENST00000300107
GeneID:10845 KEGG:hsa:10845 UCSC:uc002aom.3 CTD:10845
GeneCards:GC15M065440 HGNC:HGNC:2088 HPA:HPA040262
neXtProt:NX_O76031 PharmGKB:PA26614 HOVERGEN:HBG004940
InParanoid:O76031 OMA:KSIIKEP OrthoDB:EOG46DM2G PhylomeDB:O76031
GenomeRNAi:10845 NextBio:41174 ArrayExpress:O76031 Bgee:O76031
CleanEx:HS_CLPX Genevestigator:O76031 GermOnline:ENSG00000166855
GO:GO:0009841 Uniprot:O76031
Length = 633
Score = 756 (271.2 bits), Expect = 5.7e-75, P = 5.7e-75
Identities = 151/222 (68%), Positives = 182/222 (81%)
Query: 20 LLCMLEGTIVNVPEKNSPRKLRGEMVQVDTTNILFVASGAYNGLDRLISRRKNEKYLGFG 79
LL +LEGTIVNVPEKNS RKLRGE VQVDTTNILFVASGA+NGLDR+ISRRKNEKYLGFG
Sbjct: 384 LLKLLEGTIVNVPEKNS-RKLRGETVQVDTTNILFVASGAFNGLDRIISRRKNEKYLGFG 442
Query: 80 APSTESAGRRAASLADLANQSAAVSAEEDNKEKDAFLKQVEARDLIDFGMIPEFVGRFPI 139
PS GRRAA+ ADLAN+S + +D +EKD L+ VEARDLI+FGMIPEFVGR P+
Sbjct: 443 TPSNLGKGRRAAAAADLANRSGESNTHQDIEEKDRLLRHVEARDLIEFGMIPEFVGRLPV 502
Query: 140 LVPFHSLNQELLVRILTEPKNAMIQQYQILFTMDKVDLTFSPEALQAIARLALEKKTGAR 199
+VP HSL+++ LV+ILTEP+NA+I QYQ LF+MDK +L + +AL+AIARLALE+KTGAR
Sbjct: 503 VVPLHSLDEKTLVQILTEPRNAVIPQYQALFSMDKCELNVTEDALKAIARLALERKTGAR 562
Query: 200 GLRAIMESLLLDSMYEVPGSDILMVHITEDTVLKNTAPSYIR 241
GLR+IME LLL+ M+EVP SDI+ V + ++ V P YIR
Sbjct: 563 GLRSIMEKLLLEPMFEVPNSDIVCVEVDKEVVEGKKEPGYIR 604
Score = 170 (64.9 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 32/36 (88%), Positives = 36/36 (100%)
Query: 241 RGIVFLDEVDKIGAVPGIHQLRDVGGEGVQQGMLKV 276
+GIVFLDEVDKIG+VPGIHQLRDVGGEGVQQG+LK+
Sbjct: 352 QGIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKL 387
Score = 169 (64.5 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 32/35 (91%), Positives = 35/35 (100%)
Query: 283 GIVFLDEVDKIGAVPGIHQLRDVGGEGVQQGMLKV 317
GIVFLDEVDKIG+VPGIHQLRDVGGEGVQQG+LK+
Sbjct: 353 GIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKL 387
>UNIPROTKB|F1SJL5 [details] [associations]
symbol:CLPX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051603 "proteolysis involved in cellular protein
catabolic process" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=IEA] [GO:0016504 "peptidase activator activity"
evidence=IEA] [GO:0009841 "mitochondrial endopeptidase Clp complex"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004176 "ATP-dependent peptidase
activity" evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
[GO:0051082 "unfolded protein binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR013093
Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
GO:GO:0006457 GO:GO:0005743 GO:GO:0016504 GO:GO:0042645
GO:GO:0051603 GO:GO:0004176 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 OMA:KSIIKEP
GO:GO:0009841 GeneTree:ENSGT00390000017625 EMBL:CU856492
Ensembl:ENSSSCT00000005437 Uniprot:F1SJL5
Length = 619
Score = 756 (271.2 bits), Expect = 5.7e-75, P = 5.7e-75
Identities = 151/222 (68%), Positives = 182/222 (81%)
Query: 20 LLCMLEGTIVNVPEKNSPRKLRGEMVQVDTTNILFVASGAYNGLDRLISRRKNEKYLGFG 79
LL +LEGTIVNVPEKNS RKLRGE VQVDTTNILFVASGA+NGLDR+ISRRKNEKYLGFG
Sbjct: 370 LLKLLEGTIVNVPEKNS-RKLRGETVQVDTTNILFVASGAFNGLDRIISRRKNEKYLGFG 428
Query: 80 APSTESAGRRAASLADLANQSAAVSAEEDNKEKDAFLKQVEARDLIDFGMIPEFVGRFPI 139
PS GRRAA+ ADLAN+S + +D +EKD L+ VEARDLI+FGMIPEFVGR P+
Sbjct: 429 TPSNLGKGRRAAAAADLANRSGESNTHQDIEEKDRLLRHVEARDLIEFGMIPEFVGRLPV 488
Query: 140 LVPFHSLNQELLVRILTEPKNAMIQQYQILFTMDKVDLTFSPEALQAIARLALEKKTGAR 199
+VP HSL+++ LV+ILTEP+NA+I QYQ LF+MDK +L + +AL+AIARLALE+KTGAR
Sbjct: 489 VVPLHSLDEKTLVQILTEPRNAVIPQYQALFSMDKCELNVTEDALKAIARLALERKTGAR 548
Query: 200 GLRAIMESLLLDSMYEVPGSDILMVHITEDTVLKNTAPSYIR 241
GLR+IME LLL+ M+EVP SDI+ V + ++ V P YIR
Sbjct: 549 GLRSIMEKLLLEPMFEVPNSDIVCVEVDKEVVEGKKEPGYIR 590
Score = 170 (64.9 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 32/36 (88%), Positives = 36/36 (100%)
Query: 241 RGIVFLDEVDKIGAVPGIHQLRDVGGEGVQQGMLKV 276
+GIVFLDEVDKIG+VPGIHQLRDVGGEGVQQG+LK+
Sbjct: 338 QGIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKL 373
Score = 169 (64.5 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 32/35 (91%), Positives = 35/35 (100%)
Query: 283 GIVFLDEVDKIGAVPGIHQLRDVGGEGVQQGMLKV 317
GIVFLDEVDKIG+VPGIHQLRDVGGEGVQQG+LK+
Sbjct: 339 GIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKL 373
>RGD|1304883 [details] [associations]
symbol:Clpx "ClpX caseinolytic peptidase X homolog (E. coli)"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0004176 "ATP-dependent peptidase activity"
evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA;ISO]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA;ISO]
[GO:0006200 "ATP catabolic process" evidence=ISO] [GO:0006457
"protein folding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0009841 "mitochondrial endopeptidase Clp complex"
evidence=IEA;ISO] [GO:0010952 "positive regulation of peptidase
activity" evidence=ISO] [GO:0016504 "peptidase activator activity"
evidence=IEA;ISO] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA;ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051082 "unfolded protein
binding" evidence=IEA] [GO:0051603 "proteolysis involved in
cellular protein catabolic process" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR013093 Pfam:PF07724 SMART:SM00382 RGD:1304883
GO:GO:0005524 GO:GO:0005634 GO:GO:0006457 GO:GO:0005743
GO:GO:0046872 GO:GO:0016504 GO:GO:0042645 GO:GO:0051603
GO:GO:0004176 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544 PANTHER:PTHR11262:SF4
TIGRFAMs:TIGR00382 CTD:10845 HOVERGEN:HBG004940 OMA:KSIIKEP
OrthoDB:EOG46DM2G GO:GO:0009841 GeneTree:ENSGT00390000017625
EMBL:BC085867 IPI:IPI00196478 RefSeq:NP_001007804.1
UniGene:Rn.203913 HSSP:O25926 ProteinModelPortal:Q5U2U0 SMR:Q5U2U0
STRING:Q5U2U0 PhosphoSite:Q5U2U0 PRIDE:Q5U2U0
Ensembl:ENSRNOT00000048302 GeneID:300786 KEGG:rno:300786
UCSC:RGD:1304883 InParanoid:Q5U2U0 NextBio:647505
ArrayExpress:Q5U2U0 Genevestigator:Q5U2U0 Uniprot:Q5U2U0
Length = 633
Score = 756 (271.2 bits), Expect = 5.7e-75, P = 5.7e-75
Identities = 151/222 (68%), Positives = 182/222 (81%)
Query: 20 LLCMLEGTIVNVPEKNSPRKLRGEMVQVDTTNILFVASGAYNGLDRLISRRKNEKYLGFG 79
LL +LEGTIVNVPEKNS RKLRGE VQVDTTNILFVASGA+NGLDR+ISRRKNEKYLGFG
Sbjct: 384 LLKLLEGTIVNVPEKNS-RKLRGETVQVDTTNILFVASGAFNGLDRIISRRKNEKYLGFG 442
Query: 80 APSTESAGRRAASLADLANQSAAVSAEEDNKEKDAFLKQVEARDLIDFGMIPEFVGRFPI 139
PS GRRAA+ ADLAN+S + +D +EKD L+ VEARDLI+FGMIPEFVGR P+
Sbjct: 443 TPSNLGKGRRAAAAADLANRSGESNTHQDIEEKDRLLRHVEARDLIEFGMIPEFVGRLPV 502
Query: 140 LVPFHSLNQELLVRILTEPKNAMIQQYQILFTMDKVDLTFSPEALQAIARLALEKKTGAR 199
+VP HSL+++ LV+ILTEP+NA+I QYQ LF+MDK +L + +AL+AIARLALE+KTGAR
Sbjct: 503 VVPLHSLDEKTLVQILTEPRNAVIPQYQALFSMDKCELNVTEDALKAIARLALERKTGAR 562
Query: 200 GLRAIMESLLLDSMYEVPGSDILMVHITEDTVLKNTAPSYIR 241
GLR+IME LLL+ M+EVP SDI+ V + ++ V P YIR
Sbjct: 563 GLRSIMEKLLLEPMFEVPNSDIVCVEVDKEVVEGKKEPGYIR 604
Score = 170 (64.9 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 32/36 (88%), Positives = 36/36 (100%)
Query: 241 RGIVFLDEVDKIGAVPGIHQLRDVGGEGVQQGMLKV 276
+GIVFLDEVDKIG+VPGIHQLRDVGGEGVQQG+LK+
Sbjct: 352 QGIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKL 387
Score = 169 (64.5 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 32/35 (91%), Positives = 35/35 (100%)
Query: 283 GIVFLDEVDKIGAVPGIHQLRDVGGEGVQQGMLKV 317
GIVFLDEVDKIG+VPGIHQLRDVGGEGVQQG+LK+
Sbjct: 353 GIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKL 387
>UNIPROTKB|Q5U2U0 [details] [associations]
symbol:Clpx "ATP-dependent Clp protease ATP-binding subunit
clpX-like, mitochondrial" species:10116 "Rattus norvegicus"
[GO:0004176 "ATP-dependent peptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
[GO:0009841 "mitochondrial endopeptidase Clp complex" evidence=IEA]
[GO:0016504 "peptidase activator activity" evidence=IEA]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA] [GO:0051082
"unfolded protein binding" evidence=IEA] [GO:0051603 "proteolysis
involved in cellular protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR013093
Pfam:PF07724 SMART:SM00382 RGD:1304883 GO:GO:0005524 GO:GO:0005634
GO:GO:0006457 GO:GO:0005743 GO:GO:0046872 GO:GO:0016504
GO:GO:0042645 GO:GO:0051603 GO:GO:0004176 InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093
KO:K03544 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 CTD:10845
HOVERGEN:HBG004940 OMA:KSIIKEP OrthoDB:EOG46DM2G GO:GO:0009841
GeneTree:ENSGT00390000017625 EMBL:BC085867 IPI:IPI00196478
RefSeq:NP_001007804.1 UniGene:Rn.203913 HSSP:O25926
ProteinModelPortal:Q5U2U0 SMR:Q5U2U0 STRING:Q5U2U0
PhosphoSite:Q5U2U0 PRIDE:Q5U2U0 Ensembl:ENSRNOT00000048302
GeneID:300786 KEGG:rno:300786 UCSC:RGD:1304883 InParanoid:Q5U2U0
NextBio:647505 ArrayExpress:Q5U2U0 Genevestigator:Q5U2U0
Uniprot:Q5U2U0
Length = 633
Score = 756 (271.2 bits), Expect = 5.7e-75, P = 5.7e-75
Identities = 151/222 (68%), Positives = 182/222 (81%)
Query: 20 LLCMLEGTIVNVPEKNSPRKLRGEMVQVDTTNILFVASGAYNGLDRLISRRKNEKYLGFG 79
LL +LEGTIVNVPEKNS RKLRGE VQVDTTNILFVASGA+NGLDR+ISRRKNEKYLGFG
Sbjct: 384 LLKLLEGTIVNVPEKNS-RKLRGETVQVDTTNILFVASGAFNGLDRIISRRKNEKYLGFG 442
Query: 80 APSTESAGRRAASLADLANQSAAVSAEEDNKEKDAFLKQVEARDLIDFGMIPEFVGRFPI 139
PS GRRAA+ ADLAN+S + +D +EKD L+ VEARDLI+FGMIPEFVGR P+
Sbjct: 443 TPSNLGKGRRAAAAADLANRSGESNTHQDIEEKDRLLRHVEARDLIEFGMIPEFVGRLPV 502
Query: 140 LVPFHSLNQELLVRILTEPKNAMIQQYQILFTMDKVDLTFSPEALQAIARLALEKKTGAR 199
+VP HSL+++ LV+ILTEP+NA+I QYQ LF+MDK +L + +AL+AIARLALE+KTGAR
Sbjct: 503 VVPLHSLDEKTLVQILTEPRNAVIPQYQALFSMDKCELNVTEDALKAIARLALERKTGAR 562
Query: 200 GLRAIMESLLLDSMYEVPGSDILMVHITEDTVLKNTAPSYIR 241
GLR+IME LLL+ M+EVP SDI+ V + ++ V P YIR
Sbjct: 563 GLRSIMEKLLLEPMFEVPNSDIVCVEVDKEVVEGKKEPGYIR 604
Score = 170 (64.9 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 32/36 (88%), Positives = 36/36 (100%)
Query: 241 RGIVFLDEVDKIGAVPGIHQLRDVGGEGVQQGMLKV 276
+GIVFLDEVDKIG+VPGIHQLRDVGGEGVQQG+LK+
Sbjct: 352 QGIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKL 387
Score = 169 (64.5 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 32/35 (91%), Positives = 35/35 (100%)
Query: 283 GIVFLDEVDKIGAVPGIHQLRDVGGEGVQQGMLKV 317
GIVFLDEVDKIG+VPGIHQLRDVGGEGVQQG+LK+
Sbjct: 353 GIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKL 387
>MGI|MGI:1346017 [details] [associations]
symbol:Clpx "caseinolytic peptidase X (E.coli)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=ISO;IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006457 "protein folding" evidence=IEA] [GO:0009841
"mitochondrial endopeptidase Clp complex" evidence=ISO] [GO:0010952
"positive regulation of peptidase activity" evidence=ISO]
[GO:0016504 "peptidase activator activity" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051082 "unfolded protein binding"
evidence=IEA] [GO:0051603 "proteolysis involved in cellular protein
catabolic process" evidence=ISO] InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
MGI:MGI:1346017 GO:GO:0005524 GO:GO:0005634 GO:GO:0006457
GO:GO:0005743 GO:GO:0046872 GO:GO:0016504 GO:GO:0016887
GO:GO:0042645 GO:GO:0051603 GO:GO:0004176 InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093
KO:K03544 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 CTD:10845
HOVERGEN:HBG004940 OMA:KSIIKEP OrthoDB:EOG46DM2G GO:GO:0009841
EMBL:AJ276991 EMBL:AF134983 EMBL:AC110235 IPI:IPI00119808
RefSeq:NP_035932.2 UniGene:Mm.30088 ProteinModelPortal:Q9JHS4
SMR:Q9JHS4 STRING:Q9JHS4 PhosphoSite:Q9JHS4 PaxDb:Q9JHS4
PRIDE:Q9JHS4 Ensembl:ENSMUST00000015501 GeneID:270166
KEGG:mmu:270166 UCSC:uc009qdb.1 GeneTree:ENSGT00390000017625
InParanoid:Q9JHS4 ChiTaRS:CLPX NextBio:393279 Bgee:Q9JHS4
CleanEx:MM_CLPX Genevestigator:Q9JHS4 GermOnline:ENSMUSG00000015357
Uniprot:Q9JHS4
Length = 634
Score = 755 (270.8 bits), Expect = 7.3e-75, P = 7.3e-75
Identities = 150/222 (67%), Positives = 182/222 (81%)
Query: 20 LLCMLEGTIVNVPEKNSPRKLRGEMVQVDTTNILFVASGAYNGLDRLISRRKNEKYLGFG 79
LL +LEGTIVNVPEKNS RKLRGE VQVDTTN+LFVASGA+NGLDR+ISRRKNEKYLGFG
Sbjct: 385 LLKLLEGTIVNVPEKNS-RKLRGETVQVDTTNVLFVASGAFNGLDRIISRRKNEKYLGFG 443
Query: 80 APSTESAGRRAASLADLANQSAAVSAEEDNKEKDAFLKQVEARDLIDFGMIPEFVGRFPI 139
PS GRRAA+ ADLAN+S + +D +EKD L+ VEARDLI+FGMIPEFVGR P+
Sbjct: 444 TPSNLGKGRRAAAAADLANRSGESNTHQDIEEKDRLLRHVEARDLIEFGMIPEFVGRLPV 503
Query: 140 LVPFHSLNQELLVRILTEPKNAMIQQYQILFTMDKVDLTFSPEALQAIARLALEKKTGAR 199
+VP HSL+++ LV+ILTEP+NA+I QYQ LF+MDK +L + +AL+AIARLALE+KTGAR
Sbjct: 504 VVPLHSLDEKTLVQILTEPRNAVIPQYQALFSMDKCELNVTEDALKAIARLALERKTGAR 563
Query: 200 GLRAIMESLLLDSMYEVPGSDILMVHITEDTVLKNTAPSYIR 241
GLR+IME LLL+ M+EVP SDI+ V + ++ V P YIR
Sbjct: 564 GLRSIMEKLLLEPMFEVPNSDIVCVEVDKEVVEGKKEPGYIR 605
Score = 170 (64.9 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 32/36 (88%), Positives = 36/36 (100%)
Query: 241 RGIVFLDEVDKIGAVPGIHQLRDVGGEGVQQGMLKV 276
+GIVFLDEVDKIG+VPGIHQLRDVGGEGVQQG+LK+
Sbjct: 353 QGIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKL 388
Score = 169 (64.5 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 32/35 (91%), Positives = 35/35 (100%)
Query: 283 GIVFLDEVDKIGAVPGIHQLRDVGGEGVQQGMLKV 317
GIVFLDEVDKIG+VPGIHQLRDVGGEGVQQG+LK+
Sbjct: 354 GIVFLDEVDKIGSVPGIHQLRDVGGEGVQQGLLKL 388
>FB|FBgn0038745 [details] [associations]
symbol:CG4538 species:7227 "Drosophila melanogaster"
[GO:0005739 "mitochondrion" evidence=ISS] [GO:0009368
"endopeptidase Clp complex" evidence=ISS] [GO:0004252 "serine-type
endopeptidase activity" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0006457 "protein folding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0051082 "unfolded
protein binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0006457 GO:GO:0017111
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1219
KO:K03544 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382
GeneTree:ENSGT00390000017625 HSSP:O25926 RefSeq:NP_732463.1
UniGene:Dm.2399 ProteinModelPortal:Q8IN64 SMR:Q8IN64 STRING:Q8IN64
PaxDb:Q8IN64 PRIDE:Q8IN64 EnsemblMetazoa:FBtr0083856 GeneID:42369
KEGG:dme:Dmel_CG4538 UCSC:CG4538-RB FlyBase:FBgn0038745
InParanoid:Q8IN64 OrthoDB:EOG4RBP0W GenomeRNAi:42369 NextBio:828465
ArrayExpress:Q8IN64 Bgee:Q8IN64 Uniprot:Q8IN64
Length = 673
Score = 738 (264.8 bits), Expect = 4.6e-73, P = 4.6e-73
Identities = 147/222 (66%), Positives = 179/222 (80%)
Query: 20 LLCMLEGTIVNVPEKNSPRKLRGEMVQVDTTNILFVASGAYNGLDRLISRRKNEKYLGFG 79
+L MLEGT+VNVPE+NSPRKLRGE VQVDTTNILFVASGAY GLDRLI+RR NEKYLGFG
Sbjct: 425 MLKMLEGTVVNVPERNSPRKLRGETVQVDTTNILFVASGAYTGLDRLIARRLNEKYLGFG 484
Query: 80 APSTESAGRRAASLADLANQSAAVSAEEDNKEKDAFLKQVEARDLIDFGMIPEFVGRFPI 139
PST +GRRAA QSAA + D +E+D L +V+ARDL++FGMIPEFVGRFP+
Sbjct: 485 MPSTSGSGRRAA-------QSAASPMDNDQEERDKCLTKVQARDLVEFGMIPEFVGRFPV 537
Query: 140 LVPFHSLNQELLVRILTEPKNAMIQQYQILFTMDKVDLTFSPEALQAIARLALEKKTGAR 199
+VPFHSLN +LVRILTEP+NA++ QY+ L +D+VDLTF+ +A+++IA+LA+E+ TGAR
Sbjct: 538 IVPFHSLNVSMLVRILTEPRNALVPQYKALLGLDEVDLTFTEDAVKSIAQLAMERHTGAR 597
Query: 200 GLRAIMESLLLDSMYEVPGSDILMVHITEDTVLKNTAPSYIR 241
GLR+IME LLLD M+ VPGSDI VHIT D V + P Y R
Sbjct: 598 GLRSIMEQLLLDPMFIVPGSDIRGVHITADYVKGSATPEYSR 639
Score = 176 (67.0 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 35/38 (92%), Positives = 36/38 (94%)
Query: 280 AAFGIVFLDEVDKIGAVPGIHQLRDVGGEGVQQGMLKV 317
A GIVFLDEVDKIGAVPGIHQLRDVGGEGVQQGMLK+
Sbjct: 391 AQTGIVFLDEVDKIGAVPGIHQLRDVGGEGVQQGMLKM 428
Score = 175 (66.7 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 34/35 (97%), Positives = 35/35 (100%)
Query: 242 GIVFLDEVDKIGAVPGIHQLRDVGGEGVQQGMLKV 276
GIVFLDEVDKIGAVPGIHQLRDVGGEGVQQGMLK+
Sbjct: 394 GIVFLDEVDKIGAVPGIHQLRDVGGEGVQQGMLKM 428
>WB|WBGene00008412 [details] [associations]
symbol:D2030.2 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006457
"protein folding" evidence=IEA] [GO:0051082 "unfolded protein
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR013093
Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0006457
GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544 PANTHER:PTHR11262:SF4
GeneTree:ENSGT00390000017625 HSSP:O25926 EMBL:Z73906 OMA:QMASSEL
PIR:T20353 RefSeq:NP_001021076.1 ProteinModelPortal:P90788
SMR:P90788 STRING:P90788 PaxDb:P90788 PRIDE:P90788
EnsemblMetazoa:D2030.2a.1 EnsemblMetazoa:D2030.2a.2
EnsemblMetazoa:D2030.2a.3 GeneID:172511 KEGG:cel:CELE_D2030.2
UCSC:D2030.2a.1 CTD:172511 WormBase:D2030.2a InParanoid:P90788
NextBio:875833 ArrayExpress:P90788 Uniprot:P90788
Length = 586
Score = 495 (179.3 bits), Expect = 2.6e-47, P = 2.6e-47
Identities = 100/222 (45%), Positives = 153/222 (68%)
Query: 20 LLCMLEGTIVNVPEKNSPRKLRGEMVQVDTTNILFVASGAYNGLDRLISRRKNEKYLGFG 79
LL ++EGT+VNV + + VQ+DTT+ILF+ASGA++ LD+++ RR ++K LGFG
Sbjct: 357 LLKLVEGTVVNVKSGKKGMGSQQDQVQIDTTDILFIASGAFSNLDKIVGRRLDKKALGFG 416
Query: 80 APSTESAGRRAASLADLANQSAAVSAEEDNKEKDAFLKQVEARDLIDFGMIPEFVGRFPI 139
T S R + D +N E +++D L + + DLI FGM+PE VGRFP+
Sbjct: 417 ---TSSGNVRISG--DDSNS-------EVMRKRDELLSKADQGDLISFGMVPELVGRFPV 464
Query: 140 LVPFHSLNQELLVRILTEPKNAMIQQYQILFTMDKVDLTFSPEALQAIARLALEKKTGAR 199
LVPFHS ++++LVR++TEP+N+++ Q ++ F +D VDL+FS EAL+ +A+LAL++KTGAR
Sbjct: 465 LVPFHSFDKQMLVRVMTEPQNSLLAQLKLQFGIDNVDLSFSAEALEQVAQLALDRKTGAR 524
Query: 200 GLRAIMESLLLDSMYEVPGSDILMVHITEDTVLKNTAPSYIR 241
LR+I+E+ LL++ + VPGSDI VH++ + +L Y R
Sbjct: 525 ALRSILEAALLEAKFTVPGSDIESVHVSREAILGEKEVEYSR 566
>TIGR_CMR|CHY_0326 [details] [associations]
symbol:CHY_0326 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:246194 "Carboxydothermus hydrogenoformans
Z-2901" [GO:0005524 "ATP binding" evidence=ISS] [GO:0009368
"endopeptidase Clp complex" evidence=ISS] [GO:0051082 "unfolded
protein binding" evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
GO:GO:0006457 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0017111 GO:GO:0008233
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1219
HOGENOM:HOG000010093 KO:K03544 OMA:SDLELEH ProtClustDB:PRK05342
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 RefSeq:YP_359189.1
ProteinModelPortal:Q3AF95 SMR:Q3AF95 STRING:Q3AF95 GeneID:3726618
KEGG:chy:CHY_0326 PATRIC:21273823
BioCyc:CHYD246194:GJCN-327-MONOMER Uniprot:Q3AF95
Length = 418
Score = 335 (123.0 bits), Expect = 8.6e-45, Sum P(2) = 8.6e-45
Identities = 68/128 (53%), Positives = 94/128 (73%)
Query: 116 LKQVEARDLIDFGMIPEFVGRFPILVPFHSLNQELLVRILTEPKNAMIQQYQILFTMDKV 175
LK + DL+ FG+IPEFVGR PI+V +L+++ LVRILTEPKNA+I+QYQ LF +D V
Sbjct: 278 LKHIMPEDLLKFGLIPEFVGRLPIIVTLDALDEDALVRILTEPKNALIKQYQKLFELDGV 337
Query: 176 DLTFSPEALQAIARLALEKKTGARGLRAIMESLLLDSMYEVPG-SDILMVHITEDTVLKN 234
L F +AL+AIA+ A+++ TGARGLRAI+E ++LD MYE+P DI+ +T D V++N
Sbjct: 338 TLEFEEDALRAIAQKAIKRNTGARGLRAILEEVMLDVMYEIPSRKDIIKCIVTRD-VIEN 396
Query: 235 TAPSYIRG 242
A + G
Sbjct: 397 KAKPILVG 404
Score = 153 (58.9 bits), Expect = 8.6e-45, Sum P(2) = 8.6e-45
Identities = 29/61 (47%), Positives = 42/61 (68%)
Query: 20 LLCMLEGTIVNVPEKNSPRKLRGEMVQVDTTNILFVASGAYNGLDRLISRRKNEKYLGFG 79
LL +LEGTI +VP + + E +Q+DTTNILF+ GA+ G++++I R +K LGFG
Sbjct: 204 LLKILEGTIASVPPQGGRKHPHQEFIQIDTTNILFIVGGAFEGIEKIIQNRIGKKGLGFG 263
Query: 80 A 80
A
Sbjct: 264 A 264
>TIGR_CMR|SPO_1004 [details] [associations]
symbol:SPO_1004 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0005524
"ATP binding" evidence=ISS] [GO:0009368 "endopeptidase Clp complex"
evidence=ISS] [GO:0051082 "unfolded protein binding" evidence=ISS]
HAMAP:MF_00175 InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR010603 InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724
SMART:SM00382 SMART:SM00994 GO:GO:0005524 GO:GO:0006457
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544 ProtClustDB:PRK05342
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 RefSeq:YP_166256.1
HSSP:P0A6H1 ProteinModelPortal:Q5LUP9 SMR:Q5LUP9 GeneID:3195507
KEGG:sil:SPO1004 PATRIC:23375301 OMA:YVIGQQQ Uniprot:Q5LUP9
Length = 424
Score = 325 (119.5 bits), Expect = 1.6e-43, Sum P(2) = 1.6e-43
Identities = 64/141 (45%), Positives = 98/141 (69%)
Query: 101 AAVSAEEDNKEKDAFLKQVEARDLIDFGMIPEFVGRFPILVPFHSLNQELLVRILTEPKN 160
A V A ++ + F ++E DL+ FG+IPEFVGR P+L L+++ LV ILT+PKN
Sbjct: 273 ADVRASDERGVGELFT-ELEPEDLLKFGLIPEFVGRLPVLATLEDLDEDALVTILTKPKN 331
Query: 161 AMIQQYQILFTMDKVDLTFSPEALQAIARLALEKKTGARGLRAIMESLLLDSMYEVPGSD 220
A+++QYQ LF ++ +L F+ +AL+AIA+ A+E+KTGARGLR+IME +LLD+M+++P D
Sbjct: 332 ALVKQYQRLFELEDTELDFTDDALKAIAKRAIERKTGARGLRSIMEDILLDTMFDLPSMD 391
Query: 221 -ILMVHITEDTVLKNTAPSYI 240
+ V + E+ V + P I
Sbjct: 392 NVTKVVVNEEAVTSDAQPLLI 412
Score = 151 (58.2 bits), Expect = 1.6e-43, Sum P(2) = 1.6e-43
Identities = 31/74 (41%), Positives = 46/74 (62%)
Query: 20 LLCMLEGTIVNVPEKNSPRKLRGEMVQVDTTNILFVASGAYNGLDRLISRRKNEKYLGFG 79
LL ++EGT+ +VP + + + E +QVDTTNILF+ GA+ GLD++I++R +GFG
Sbjct: 213 LLKLMEGTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDKIIAQRGKGSAMGFG 272
Query: 80 APSTESAGRRAASL 93
A S R L
Sbjct: 273 ADVRASDERGVGEL 286
>UNIPROTKB|P0A6H1 [details] [associations]
symbol:clpX "ClpX" species:83333 "Escherichia coli K-12"
[GO:0051082 "unfolded protein binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0006457 "protein folding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006950 "response to stress" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;IDA] HAMAP:MF_00175 InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
GO:GO:0006457 GO:GO:0006950 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0046872
GO:GO:0008270 EMBL:U82664 GO:GO:0017111 InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093
KO:K03544 OMA:SDLELEH ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4
TIGRFAMs:TIGR00382 EMBL:L18867 EMBL:Z23278 PIR:A48709
RefSeq:NP_414972.1 RefSeq:YP_488730.1 PDB:1OVX PDB:2DS5 PDB:2DS6
PDB:2DS7 PDB:2DS8 PDB:3HTE PDB:3HWS PDBsum:1OVX PDBsum:2DS5
PDBsum:2DS6 PDBsum:2DS7 PDBsum:2DS8 PDBsum:3HTE PDBsum:3HWS
ProteinModelPortal:P0A6H1 SMR:P0A6H1 DIP:DIP-35907N IntAct:P0A6H1
PaxDb:P0A6H1 PRIDE:P0A6H1 EnsemblBacteria:EBESCT00000004587
EnsemblBacteria:EBESCT00000004721 EnsemblBacteria:EBESCT00000004722
EnsemblBacteria:EBESCT00000015548 GeneID:12931741 GeneID:945083
KEGG:ecj:Y75_p0426 KEGG:eco:b0438 PATRIC:32116029 EchoBASE:EB0157
EcoGene:EG10159 BioCyc:EcoCyc:EG10159-MONOMER
BioCyc:ECOL316407:JW0428-MONOMER BioCyc:MetaCyc:EG10159-MONOMER
EvolutionaryTrace:P0A6H1 Genevestigator:P0A6H1 Uniprot:P0A6H1
Length = 424
Score = 341 (125.1 bits), Expect = 2.5e-43, Sum P(2) = 2.5e-43
Identities = 69/143 (48%), Positives = 96/143 (67%)
Query: 101 AAVSAEEDNKEKDAFLKQVEARDLIDFGMIPEFVGRFPILVPFHSLNQELLVRILTEPKN 160
A V A+ D + L QVE DLI FG+IPEF+GR P++ + L++E L++IL EPKN
Sbjct: 272 ATVKAKSDKASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKN 331
Query: 161 AMIQQYQILFTMDKVDLTFSPEALQAIARLALEKKTGARGLRAIMESLLLDSMYEVPG-S 219
A+ +QYQ LF ++ VDL F EAL AIA+ A+ +KTGARGLR+I+E+ LLD+MY++P
Sbjct: 332 ALTKQYQALFNLEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDLPSME 391
Query: 220 DILMVHITEDTVLKNTAPSYIRG 242
D+ V I E + + P I G
Sbjct: 392 DVEKVVIDESVIDGQSKPLLIYG 414
Score = 133 (51.9 bits), Expect = 2.5e-43, Sum P(2) = 2.5e-43
Identities = 33/81 (40%), Positives = 48/81 (59%)
Query: 20 LLCMLEGTIVNVPEKNSPRKLRGEMVQVDTTNILFVASGAYNGLDRLISRR-KNEKYLGF 78
LL ++EGT+ VP + + + E +QVDT+ ILF+ GA+ GLD++IS R + +GF
Sbjct: 211 LLKLIEGTVAAVPPQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGF 270
Query: 79 GAPSTESAGRRAASLADLANQ 99
GA T A AS +L Q
Sbjct: 271 GA--TVKAKSDKASEGELLAQ 289
>TIGR_CMR|CJE_0324 [details] [associations]
symbol:CJE_0324 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:195099 "Campylobacter jejuni RM1221"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0009368 "endopeptidase
Clp complex" evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
GO:GO:0006457 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0017111 GO:GO:0008233
InterPro:IPR025943 PROSITE:PS00676 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
OMA:SDLELEH ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4
TIGRFAMs:TIGR00382 RefSeq:YP_178344.1 ProteinModelPortal:Q5HWJ1
SMR:Q5HWJ1 STRING:Q5HWJ1 GeneID:3231086 KEGG:cjr:CJE0324
PATRIC:20042350 BioCyc:CJEJ195099:GJC0-329-MONOMER Uniprot:Q5HWJ1
Length = 407
Score = 328 (120.5 bits), Expect = 3.2e-43, Sum P(2) = 3.2e-43
Identities = 67/137 (48%), Positives = 99/137 (72%)
Query: 105 AEEDNKEKDAFLKQVEARDLIDFGMIPEFVGRFPILVPFHSLNQELLVRILTEPKNAMIQ 164
A+E+NK A L+++E DL+ FG+IPE +GR ++ + LN+E +VRILTEPKNA+I+
Sbjct: 270 AKEENK---ALLEKIEPDDLVHFGLIPELIGRLHVIASLNELNEEDMVRILTEPKNAIIK 326
Query: 165 QYQILFTMDKVDLTFSPEALQAIARLALEKKTGARGLRAIMESLLLDSMYEVPGSDILMV 224
QYQ LF +D V+L F +AL+AIA+LALE+KTGARGLR+I+E +++D M+E+P +
Sbjct: 327 QYQKLFAIDGVNLKFEEDALRAIAQLALERKTGARGLRSIIEEMMVDLMFELPEYKNYDI 386
Query: 225 HITEDTVLKNTAPSYIR 241
IT++ V N I+
Sbjct: 387 VITKEVVKDNAKALLIK 403
Score = 145 (56.1 bits), Expect = 3.2e-43, Sum P(2) = 3.2e-43
Identities = 25/59 (42%), Positives = 42/59 (71%)
Query: 20 LLCMLEGTIVNVPEKNSPRKLRGEMVQVDTTNILFVASGAYNGLDRLISRRKNEKYLGF 78
LL ++EG++VN+P K + E +Q+DT+NILFV GA++GL+ ++ R+ +K +GF
Sbjct: 208 LLKIIEGSLVNIPPKGGRKHPNQEFIQIDTSNILFVCGGAFDGLETILKRKLGDKVVGF 266
>TAIR|locus:2154257 [details] [associations]
symbol:CLPX "CLP protease regulatory subunit X"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISM;IDA] [GO:0006457 "protein
folding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0051082 "unfolded protein binding" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=IDA] [GO:0015996 "chlorophyll
catabolic process" evidence=RCA] InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 EMBL:CP002688 GO:GO:0006457
GO:GO:0006508 GO:GO:0017111 EMBL:AB013388 GO:GO:0008233
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 KO:K03544
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 HSSP:O25926
ProtClustDB:CLSN2690007 EMBL:AY035103 EMBL:AY142561 IPI:IPI00536799
RefSeq:NP_568792.1 UniGene:At.21717 ProteinModelPortal:Q9FK07
SMR:Q9FK07 STRING:Q9FK07 PRIDE:Q9FK07 EnsemblPlants:AT5G53350.1
GeneID:835416 KEGG:ath:AT5G53350 TAIR:At5g53350 InParanoid:Q9FK07
OMA:NCRSAYF PhylomeDB:Q9FK07 ArrayExpress:Q9FK07
Genevestigator:Q9FK07 Uniprot:Q9FK07
Length = 579
Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
Identities = 100/217 (46%), Positives = 148/217 (68%)
Query: 20 LLCMLEGTIVNVPEKNSPRKLRGEMVQVDTTNILFVASGAYNGLDRLISRRKNEKYLGFG 79
LL MLEGTIVNVPEK + + RG+ +Q+DT +ILF+ GA+ +++ IS R+++ +GFG
Sbjct: 322 LLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFVDIEKTISERRHDSSIGFG 381
Query: 80 APSTESAGRRAASLADLANQSAAVSAEEDNKEKDAFLKQVEARDLIDFGMIPEFVGRFPI 139
AP A RA + + AAV++ ++ VE+ DLI +G+IPEFVGRFP+
Sbjct: 382 APVR--ANMRAGGVTN-----AAVASN--------LMETVESSDLIAYGLIPEFVGRFPV 426
Query: 140 LVPFHSLNQELLVRILTEPKNAMIQQYQILFTMDKVDLTFSPEALQAIARLALEKKTGAR 199
LV +L + L+++LTEPKNA+ +QY+ ++ M+ V L F+ AL+ IAR A+ K TGAR
Sbjct: 427 LVSLSALTENQLMQVLTEPKNALGKQYKKMYQMNSVKLHFTESALRLIARKAITKNTGAR 486
Query: 200 GLRAIMESLLLDSMYEVP----GSDIL-MVHITEDTV 231
GLRA++ES+L+DSMYE+P GSD++ V + E+ V
Sbjct: 487 GLRALLESILMDSMYEIPDEGTGSDMIEAVVVDEEAV 523
>TIGR_CMR|GSU_1791 [details] [associations]
symbol:GSU_1791 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:243231 "Geobacter sulfurreducens PCA"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0009368 "endopeptidase
Clp complex" evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
GO:GO:0006457 GO:GO:0046872 GO:GO:0008270 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0017111 InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093
KO:K03544 ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4
TIGRFAMs:TIGR00382 OMA:IMFEVPS RefSeq:NP_952841.1
ProteinModelPortal:Q74C83 SMR:Q74C83 PRIDE:Q74C83 GeneID:2686411
KEGG:gsu:GSU1791 PATRIC:22026429
BioCyc:GSUL243231:GH27-1811-MONOMER Uniprot:Q74C83
Length = 417
Score = 301 (111.0 bits), Expect = 7.5e-42, Sum P(2) = 7.5e-42
Identities = 61/129 (47%), Positives = 85/129 (65%)
Query: 110 KEKDAFLKQVEARDLIDFGMIPEFVGRFPILVPFHSLNQELLVRILTEPKNAMIQQYQIL 169
K L +V DL+ FG IPEF+GR P+L L++ +V+IL EPKNA+I+QYQ L
Sbjct: 278 KRAGELLTEVTPEDLLKFGFIPEFIGRLPVLATLRELDETAMVQILKEPKNALIKQYQKL 337
Query: 170 FTMDKVDLTFSPEALQAIARLALEKKTGARGLRAIMESLLLDSMYEVPGSDILM-VHITE 228
F M+ V L F+ +L AI+R AL++KTGARGLR+I+E+ +LD MYE+P ++ V I E
Sbjct: 338 FEMEHVKLKFTDGSLVAISREALKRKTGARGLRSILENAMLDIMYEIPSQTMVKEVVINE 397
Query: 229 DTVLKNTAP 237
D + P
Sbjct: 398 DVIYNKEKP 406
Score = 159 (61.0 bits), Expect = 7.5e-42, Sum P(2) = 7.5e-42
Identities = 33/74 (44%), Positives = 46/74 (62%)
Query: 20 LLCMLEGTIVNVPEKNSPRKLRGEMVQVDTTNILFVASGAYNGLDRLISRRKNEKYLGFG 79
LL ++EGT+ +VP K + + E ++VDTTNILF+ GA+ GLD +I +R K LGFG
Sbjct: 210 LLKIIEGTVASVPPKGGRKHPQQEFLKVDTTNILFICGGAFAGLDSIIQQRIGVKKLGFG 269
Query: 80 APSTESAGRRAASL 93
A +RA L
Sbjct: 270 ADVKSKVEKRAGEL 283
>UNIPROTKB|P0CAU2 [details] [associations]
symbol:clpX "ATP-dependent Clp protease ATP-binding subunit
ClpX" species:190650 "Caulobacter crescentus CB15" [GO:0005515
"protein binding" evidence=IPI] HAMAP:MF_00175 InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
GO:GO:0006457 GO:GO:0046872 GO:GO:0008270 GO:GO:0017111
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1219
HOGENOM:HOG000010093 KO:K03544 OMA:SDLELEH ProtClustDB:PRK05342
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 EMBL:AE005673 PIR:D87492
RefSeq:NP_420768.1 ProteinModelPortal:P0CAU2 SMR:P0CAU2
IntAct:P0CAU2 PRIDE:P0CAU2 GeneID:942736 GenomeReviews:AE005673_GR
KEGG:ccr:CC_1961 PATRIC:21300930 Uniprot:P0CAU2
Length = 420
Score = 299 (110.3 bits), Expect = 7.5e-42, Sum P(2) = 7.5e-42
Identities = 57/117 (48%), Positives = 85/117 (72%)
Query: 101 AAVSAEEDNKEKDAFLKQVEARDLIDFGMIPEFVGRFPILVPFHSLNQELLVRILTEPKN 160
A V+ E+ + + L+ VE DL FG+IPEF+GR P++ L++ LV+ILTEPKN
Sbjct: 270 AKVTDPEERRTGE-ILRNVEPDDLQRFGLIPEFIGRLPVVATLEDLDEAALVKILTEPKN 328
Query: 161 AMIQQYQILFTMDKVDLTFSPEALQAIARLALEKKTGARGLRAIMESLLLDSMYEVP 217
A ++QYQ LF M+ + LTF+ +AL +A+ A+ +KTGARGLR+IME +LL++M+E+P
Sbjct: 329 AFVKQYQRLFEMENIGLTFTEDALHQVAKKAIARKTGARGLRSIMEGILLETMFELP 385
Score = 161 (61.7 bits), Expect = 7.5e-42, Sum P(2) = 7.5e-42
Identities = 32/74 (43%), Positives = 48/74 (64%)
Query: 20 LLCMLEGTIVNVPEKNSPRKLRGEMVQVDTTNILFVASGAYNGLDRLISRRKNEKYLGFG 79
LL ++EGT+ +VP + + + E +QVDTTNILF+ GA+ GL+++IS R K +GFG
Sbjct: 210 LLKIMEGTVASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLEKIISARGAAKSIGFG 269
Query: 80 APSTESAGRRAASL 93
A T+ RR +
Sbjct: 270 AKVTDPEERRTGEI 283
>TIGR_CMR|NSE_0753 [details] [associations]
symbol:NSE_0753 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:222891 "Neorickettsia sennetsu str. Miyayama"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0009368 "endopeptidase
Clp complex" evidence=ISS] [GO:0051082 "unfolded protein binding"
evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR010603 InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724
SMART:SM00382 SMART:SM00994 GO:GO:0005524 GO:GO:0006457
GO:GO:0046872 GO:GO:0008270 GO:GO:0017111 EMBL:CP000237
GenomeReviews:CP000237_GR InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382
OMA:IMFEVPS RefSeq:YP_506628.1 ProteinModelPortal:Q2GD18
STRING:Q2GD18 PRIDE:Q2GD18 GeneID:3931978 KEGG:nse:NSE_0753
PATRIC:22681511 BioCyc:NSEN222891:GHFU-764-MONOMER Uniprot:Q2GD18
Length = 400
Score = 320 (117.7 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 66/129 (51%), Positives = 92/129 (71%)
Query: 105 AEEDNKE-KDAFLKQVEARDLIDFGMIPEFVGRFPILVPFHSLNQELLVRILTEPKNAMI 163
+E +KE LK+VE DL+ FGMIPEFVGR P++ L ++ LV IL+ PKNA++
Sbjct: 265 SELQSKEVSPTILKKVEPEDLVKFGMIPEFVGRLPVIGVLDELTEDNLVEILSVPKNALV 324
Query: 164 QQYQILFTMDKVDLTFSPEALQAIARLALEKKTGARGLRAIMESLLLDSMYEVPGS-DIL 222
+QY LF MD + L+FS EAL+ +AR A+++K GARGLRAIMES+L + M+E+P + D+
Sbjct: 325 KQYVCLFGMDNIQLSFSDEALKTVARAAIKRKVGARGLRAIMESVLRNYMFELPSNKDVK 384
Query: 223 MVHITEDTV 231
+ ITED V
Sbjct: 385 TLIITEDIV 393
Score = 137 (53.3 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 26/59 (44%), Positives = 40/59 (67%)
Query: 20 LLCMLEGTIVNVPEKNSPRKLRGEMVQVDTTNILFVASGAYNGLDRLISRRKNEKYLGF 78
LL ++EGTI +VP + + E +Q+DTTNILF+ GA+ GLD +I+ R++ +GF
Sbjct: 205 LLKIMEGTIASVPPQGGRKHPNQETIQIDTTNILFICGGAFVGLDNIIANRQSINTMGF 263
Score = 45 (20.9 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 27/103 (26%), Positives = 44/103 (42%)
Query: 230 TVLKNTAPS-YIR-GIV--FLDEVDKIGAVPGIHQLRDVGGEGVQQGMLKVSALAAFG-- 283
T+LK P ++ G++ F+ + IG + + + V V + L + FG
Sbjct: 275 TILKKVEPEDLVKFGMIPEFVGRLPVIGVLDELTEDNLVEILSVPKNALVKQYVCLFGMD 334
Query: 284 ---IVFLDEVDKIGAVPGIHQLRDVGGEGVQQGMLKVSTSYLF 323
+ F DE K A I R VG G++ M V +Y+F
Sbjct: 335 NIQLSFSDEALKTVARAAIK--RKVGARGLRAIMESVLRNYMF 375
>UNIPROTKB|P0A528 [details] [associations]
symbol:clpX "ATP-dependent Clp protease ATP-binding subunit
ClpX" species:1773 "Mycobacterium tuberculosis" [GO:0005515
"protein binding" evidence=IPI] [GO:0005618 "cell wall"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] HAMAP:MF_00175
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR010603
InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724 SMART:SM00382
SMART:SM00994 GO:GO:0005524 GO:GO:0040007 GO:GO:0005618
GO:GO:0006457 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0046872 GO:GO:0008270 EMBL:BX842579
GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544 ProtClustDB:PRK05342
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 OMA:IMFEVPS PIR:H70864
RefSeq:NP_216973.1 RefSeq:NP_337018.1 RefSeq:YP_006515894.1
ProteinModelPortal:P0A528 SMR:P0A528 PRIDE:P0A528
EnsemblBacteria:EBMYCT00000001091 EnsemblBacteria:EBMYCT00000069736
GeneID:13319167 GeneID:888167 GeneID:925794 KEGG:mtc:MT2532
KEGG:mtu:Rv2457c KEGG:mtv:RVBD_2457c PATRIC:18127322
TubercuList:Rv2457c Uniprot:P0A528
Length = 426
Score = 315 (115.9 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 66/141 (46%), Positives = 96/141 (68%)
Query: 101 AAVSAEEDNKEKDAFLKQVEARDLIDFGMIPEFVGRFPILVPFHSLNQELLVRILTEPKN 160
A V ++ + D F V DLI FG+IPEF+GR P++ +L++E LV+IL+EPKN
Sbjct: 273 AEVRSKAEIDTTDHFA-DVMPEDLIKFGLIPEFIGRLPVVASVTNLDKESLVKILSEPKN 331
Query: 161 AMIQQYQILFTMDKVDLTFSPEALQAIARLALEKKTGARGLRAIMESLLLDSMYEVPG-S 219
A+++QY LF MD V+L F+ +AL+AIA A+ + TGARGLRAIME +LL MY++P
Sbjct: 332 ALVKQYIRLFEMDGVELEFTDDALEAIADQAIHRGTGARGLRAIMEEVLLPVMYDIPSRD 391
Query: 220 DILMVHITEDTVLKNTAPSYI 240
D+ V +T++TV N P+ +
Sbjct: 392 DVAKVVVTKETVQDNVLPTIV 412
Score = 142 (55.0 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 27/61 (44%), Positives = 42/61 (68%)
Query: 20 LLCMLEGTIVNVPEKNSPRKLRGEMVQVDTTNILFVASGAYNGLDRLISRRKNEKYLGFG 79
LL +LEGT +VP + + E +Q+DTTN+LF+ +GA+ GL+++I R ++ LGFG
Sbjct: 213 LLKILEGTQASVPPQGGRKHPHQEFIQIDTTNVLFIVAGAFAGLEKIIYERVGKRGLGFG 272
Query: 80 A 80
A
Sbjct: 273 A 273
>TIGR_CMR|BA_4704 [details] [associations]
symbol:BA_4704 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:198094 "Bacillus anthracis str. Ames"
[GO:0006508 "proteolysis" evidence=ISS] HAMAP:MF_00175
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR010603
InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724 SMART:SM00382
SMART:SM00994 GO:GO:0005524 GO:GO:0006457 GO:GO:0046872
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008270
GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544 ProtClustDB:PRK05342
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 RefSeq:NP_846917.1
RefSeq:YP_021352.1 RefSeq:YP_030616.1 ProteinModelPortal:Q81LB9
SMR:Q81LB9 PRIDE:Q81LB9 DNASU:1083685
EnsemblBacteria:EBBACT00000013271 EnsemblBacteria:EBBACT00000014313
EnsemblBacteria:EBBACT00000019954 GeneID:1083685 GeneID:2816065
GeneID:2851842 KEGG:ban:BA_4704 KEGG:bar:GBAA_4704 KEGG:bat:BAS4369
OMA:IMFEVPS BioCyc:BANT260799:GJAJ-4424-MONOMER
BioCyc:BANT261594:GJ7F-4572-MONOMER Uniprot:Q81LB9
Length = 419
Score = 300 (110.7 bits), Expect = 2.0e-41, Sum P(2) = 2.0e-41
Identities = 62/134 (46%), Positives = 90/134 (67%)
Query: 108 DNKEKDAFLKQVEARDLIDFGMIPEFVGRFPILVPFHSLNQELLVRILTEPKNAMIQQYQ 167
D EK L V DL+ FG+IPEF+GR P++ L+++ LV ILT+PKNA+++Q+Q
Sbjct: 274 DVNEKHV-LSHVLPEDLLRFGLIPEFIGRLPVIANLEPLDEDALVDILTKPKNALVKQFQ 332
Query: 168 ILFTMDKVDLTFSPEALQAIARLALEKKTGARGLRAIMESLLLDSMYEVPG-SDILMVHI 226
L +D V+L F AL IA+ A+E+KTGARGLR+I+E L+L+ M+E+P DI +
Sbjct: 333 KLLELDDVELEFEEGALIEIAKKAIERKTGARGLRSIIEGLMLEVMFELPSRKDIEKCIL 392
Query: 227 TEDTVLKNTAPSYI 240
T++TV N AP +
Sbjct: 393 TKETVADNAAPKLV 406
Score = 156 (60.0 bits), Expect = 2.0e-41, Sum P(2) = 2.0e-41
Identities = 28/61 (45%), Positives = 43/61 (70%)
Query: 20 LLCMLEGTIVNVPEKNSPRKLRGEMVQVDTTNILFVASGAYNGLDRLISRRKNEKYLGFG 79
LL +LEGT+ +VP + + E +Q+DTTNILF+ GA++G++ +I RR EK +GFG
Sbjct: 208 LLKILEGTVASVPPQGGRKHPHQEFIQIDTTNILFICGGAFDGIEPIIKRRLGEKVIGFG 267
Query: 80 A 80
+
Sbjct: 268 S 268
>TIGR_CMR|CBU_0739 [details] [associations]
symbol:CBU_0739 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:227377 "Coxiella burnetii RSA 493"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR010603 InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724
SMART:SM00382 SMART:SM00994 GO:GO:0005524 GO:GO:0006457
GO:GO:0046872 GO:GO:0008270 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544 OMA:SDLELEH
ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382
RefSeq:NP_819765.1 ProteinModelPortal:Q83DJ1 SMR:Q83DJ1
PRIDE:Q83DJ1 GeneID:1208630 KEGG:cbu:CBU_0739 PATRIC:17930169
BioCyc:CBUR227377:GJ7S-736-MONOMER Uniprot:Q83DJ1
Length = 422
Score = 318 (117.0 bits), Expect = 6.6e-41, Sum P(2) = 6.6e-41
Identities = 65/144 (45%), Positives = 100/144 (69%)
Query: 100 SAAVSAEED-NKEKDAFLKQVEARDLIDFGMIPEFVGRFPILVPFHSLNQELLVRILTEP 158
+A V +ED ++E +KQ E DLI +G+IPEFVGR PI+ L+++ L+RILTEP
Sbjct: 266 AAEVRPKEDFSREASKLIKQTEPGDLIKYGLIPEFVGRLPIITTLEELDEDALMRILTEP 325
Query: 159 KNAMIQQYQILFTMDKVDLTFSPEALQAIARLALEKKTGARGLRAIMESLLLDSMYEVPG 218
KNA+++QY+ LF + V++ F +AL+AIA+ A+++KTGARGLR+I+E LLD MY++PG
Sbjct: 326 KNALVKQYRKLFEFEGVEIDFREDALKAIAKRAIQQKTGARGLRSIVEHTLLDLMYDLPG 385
Query: 219 --SDILMVHITEDTVLKNTAPSYI 240
+ + V I + + + P +I
Sbjct: 386 VAAGLRKVVIDSGVIDQASPPIFI 409
Score = 133 (51.9 bits), Expect = 6.6e-41, Sum P(2) = 6.6e-41
Identities = 28/76 (36%), Positives = 46/76 (60%)
Query: 20 LLCMLEGTIVNVPEKNSPRKLRGEMVQVDTTNILFVASGAYNGLDRLISRRKNEKYLGFG 79
LL ++EGT+ ++P + + + E +QVDT+NILF+ GA+ L ++I RR ++ +GF
Sbjct: 207 LLKLIEGTVASIPPQGGRKHPQQEYLQVDTSNILFICGGAFADLHKIIQRRTDKSGIGFA 266
Query: 80 AP--STESAGRRAASL 93
A E R A+ L
Sbjct: 267 AEVRPKEDFSREASKL 282
>TIGR_CMR|SO_1795 [details] [associations]
symbol:SO_1795 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:211586 "Shewanella oneidensis MR-1"
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR010603 InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724
SMART:SM00382 SMART:SM00994 GO:GO:0005524 GO:GO:0006457
GO:GO:0046872 GO:GO:0008270 EMBL:AE014299 GenomeReviews:AE014299_GR
GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544 ProtClustDB:PRK05342
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 RefSeq:NP_717404.1
ProteinModelPortal:Q8EG18 SMR:Q8EG18 PRIDE:Q8EG18 GeneID:1169568
KEGG:son:SO_1795 PATRIC:23523213 OMA:MEMRESA Uniprot:Q8EG18
Length = 426
Score = 325 (119.5 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
Identities = 64/141 (45%), Positives = 97/141 (68%)
Query: 101 AAVSAEEDNKEKDAFLKQVEARDLIDFGMIPEFVGRFPILVPFHSLNQELLVRILTEPKN 160
A V E+D L QVE DL+ +G+IPEF+GR P++ L++E LV+IL+EPKN
Sbjct: 273 AQVKGEKDKATISETLSQVEPGDLVKYGLIPEFIGRLPVVATLTELDEEALVQILSEPKN 332
Query: 161 AMIQQYQILFTMDKVDLTFSPEALQAIARLALEKKTGARGLRAIMESLLLDSMYEVPGSD 220
A+ +QY LF M+ V+L F +AL+AIA A+ +KTGARGLR+I+E +LLD+MY++P D
Sbjct: 333 ALTKQYNALFEMEGVELEFREDALKAIAHKAMSRKTGARGLRSIVEGILLDTMYDIPSID 392
Query: 221 ILMVHITEDTVLKN-TAPSYI 240
++ + +++V+ +AP I
Sbjct: 393 GVVKAVVDESVVNGESAPILI 413
Score = 122 (48.0 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
Identities = 25/62 (40%), Positives = 41/62 (66%)
Query: 20 LLCMLEGTIVNVPEKNSPRKLRGEMVQVDTTNILFVASGAYNGLDRLISRRKNE-KYLGF 78
LL ++EGT+ VP + + + E +QVDT+ ILF+ GA+ GL+++I +R + +GF
Sbjct: 212 LLKLIEGTVAAVPPQGGRKHPQQEFLQVDTSKILFICGGAFAGLEKVIEQRAHVGSGIGF 271
Query: 79 GA 80
GA
Sbjct: 272 GA 273
>TIGR_CMR|ECH_0900 [details] [associations]
symbol:ECH_0900 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:205920 "Ehrlichia chaffeensis str. Arkansas"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0009368 "endopeptidase
Clp complex" evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
GO:GO:0006457 GO:GO:0046872 EMBL:CP000236 GenomeReviews:CP000236_GR
GO:GO:0008270 GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
OMA:SDLELEH ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4
TIGRFAMs:TIGR00382 RefSeq:YP_507694.1 ProteinModelPortal:Q2GFT9
SMR:Q2GFT9 STRING:Q2GFT9 PRIDE:Q2GFT9 GeneID:3927295
KEGG:ech:ECH_0900 PATRIC:20577200
BioCyc:ECHA205920:GJNR-903-MONOMER Uniprot:Q2GFT9
Length = 406
Score = 311 (114.5 bits), Expect = 1.5e-39, Sum P(2) = 1.5e-39
Identities = 64/138 (46%), Positives = 93/138 (67%)
Query: 104 SAEEDNKEKDAFLKQVEARDLIDFGMIPEFVGRFPILVPFHSLNQELLVRILTEPKNAMI 163
+ ++ +K KD F E DL+ FG+IPEFVGR P++ L++ L RIL EPKN+++
Sbjct: 266 NVQKVSKNKDIFC-YTEPEDLVKFGLIPEFVGRIPVITSLGELDESTLCRILVEPKNSLV 324
Query: 164 QQYQILFTMDKVDLTFSPEALQAIARLALEKKTGARGLRAIMESLLLDSMYEVPGS-DIL 222
+QY+ LF MD ++L F AL IA+ A +KTGARGLRAI+E+LLLD M+E PGS D+
Sbjct: 325 KQYKKLFEMDNINLQFDDSALSVIAKKAAVRKTGARGLRAILEALLLDLMFESPGSSDVN 384
Query: 223 MVHITEDTVLKNTAPSYI 240
V I+++ V + S++
Sbjct: 385 QVVISKEMVEELMVSSHL 402
Score = 127 (49.8 bits), Expect = 1.5e-39, Sum P(2) = 1.5e-39
Identities = 27/76 (35%), Positives = 43/76 (56%)
Query: 5 TCVAPDVETLVHMWKLLCMLEGTIVNVPEKNSPRKLRGEMVQVDTTNILFVASGAYNGLD 64
T + DV LL ++EGT+ +VP + + E +Q++T NILF+ GA++GLD
Sbjct: 190 TSITRDVSGEGVQQALLKVIEGTVSSVPPQGGRKHPHQEFIQINTDNILFIFGGAFDGLD 249
Query: 65 RLISRRKNEKYLGFGA 80
++I R +GF A
Sbjct: 250 KIIESRHRGSSMGFEA 265
>TIGR_CMR|CPS_3784 [details] [associations]
symbol:CPS_3784 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:167879 "Colwellia psychrerythraea 34H"
[GO:0005524 "ATP binding" evidence=ISS] HAMAP:MF_00175
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR010603
InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724 SMART:SM00382
SMART:SM00994 GO:GO:0005524 GO:GO:0006457 GO:GO:0046872
GO:GO:0008270 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0017111
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1219
HOGENOM:HOG000010093 KO:K03544 OMA:SDLELEH ProtClustDB:PRK05342
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 RefSeq:YP_270451.1
HSSP:P0A6H5 ProteinModelPortal:Q47XL9 SMR:Q47XL9 STRING:Q47XL9
PRIDE:Q47XL9 GeneID:3521714 KEGG:cps:CPS_3784 PATRIC:21470481
BioCyc:CPSY167879:GI48-3806-MONOMER Uniprot:Q47XL9
Length = 424
Score = 308 (113.5 bits), Expect = 1.5e-39, Sum P(2) = 1.5e-39
Identities = 58/126 (46%), Positives = 90/126 (71%)
Query: 116 LKQVEARDLIDFGMIPEFVGRFPILVPFHSLNQELLVRILTEPKNAMIQQYQILFTMDKV 175
L VE +DL+ +G+IPEF+GR P+L L++ L++IL EPKNA+ +Q+ LF M+ V
Sbjct: 288 LADVEPQDLVKYGLIPEFIGRLPVLATLRELDEAALIQILQEPKNALTKQFTALFDMENV 347
Query: 176 DLTFSPEALQAIARLALEKKTGARGLRAIMESLLLDSMYEVPGSD-ILMVHITEDTVLKN 234
+L F +AL AIAR A+++KTGARGLR+I+E++LLD+MYE+P + + + + E+T+
Sbjct: 348 ELEFRSDALHAIARKAMDRKTGARGLRSIVEAVLLDTMYELPSMENVSKIVVDENTIKGE 407
Query: 235 TAPSYI 240
+ P I
Sbjct: 408 SKPIVI 413
Score = 130 (50.8 bits), Expect = 1.5e-39, Sum P(2) = 1.5e-39
Identities = 30/78 (38%), Positives = 49/78 (62%)
Query: 20 LLCMLEGTIVNVPEKNSPRKLRGEMVQVDTTNILFVASGAYNGLDRLISRRKNEKY-LGF 78
LL ++EGT+ +VP + + + E +QVDT+ ILF+ GA+ GLD+++ +R + +GF
Sbjct: 212 LLKLIEGTVASVPPQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVVEQRNHTGTGIGF 271
Query: 79 GAPSTESAGR-RAASLAD 95
GA E G+ + SL D
Sbjct: 272 GA---EVRGKDQEISLTD 286
>UNIPROTKB|Q9KQS7 [details] [associations]
symbol:clpX "ATP-dependent Clp protease ATP-binding subunit
ClpX" species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0008233 "peptidase
activity" evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
GO:GO:0006457 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0017111 GO:GO:0008233
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1219
KO:K03544 OMA:SDLELEH ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4
TIGRFAMs:TIGR00382 PIR:F82139 RefSeq:NP_231555.1
ProteinModelPortal:Q9KQS7 SMR:Q9KQS7 PRIDE:Q9KQS7 DNASU:2613550
GeneID:2613550 KEGG:vch:VC1921 PATRIC:20082886 Uniprot:Q9KQS7
Length = 426
Score = 310 (114.2 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
Identities = 61/141 (43%), Positives = 95/141 (67%)
Query: 101 AAVSAEEDNKEKDAFLKQVEARDLIDFGMIPEFVGRFPILVPFHSLNQELLVRILTEPKN 160
A V +++++K QVE DL+ +G+IPEF+GR P+ L++ L++IL EPKN
Sbjct: 274 ADVRSKDNSKTLSELFTQVEPEDLVKYGLIPEFIGRLPVTATLTELDEAALIQILCEPKN 333
Query: 161 AMIQQYQILFTMDKVDLTFSPEALQAIARLALEKKTGARGLRAIMESLLLDSMYEVPG-S 219
A+ +QY LF ++ VDL F +AL+AIA A+++KTGARGLR+I+E++LL++MYE+P
Sbjct: 334 ALTKQYAALFELENVDLEFREDALKAIAAKAMKRKTGARGLRSILEAVLLETMYELPSME 393
Query: 220 DILMVHITEDTVLKNTAPSYI 240
++ V I E + +AP I
Sbjct: 394 EVSKVVIDESVINGESAPLLI 414
Score = 127 (49.8 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
Identities = 26/62 (41%), Positives = 41/62 (66%)
Query: 20 LLCMLEGTIVNVPEKNSPRKLRGEMVQVDTTNILFVASGAYNGLDRLISRR-KNEKYLGF 78
LL ++EGT+ +VP + + + E +QVDT+ ILF+ GA+ GLD++I +R +GF
Sbjct: 213 LLKLIEGTVASVPPQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVATGTGIGF 272
Query: 79 GA 80
GA
Sbjct: 273 GA 274
>TIGR_CMR|VC_1921 [details] [associations]
symbol:VC_1921 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:686 "Vibrio cholerae O1 biovar El Tor"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0008233 "peptidase
activity" evidence=ISS] HAMAP:MF_00175 InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR010603 InterPro:IPR013093
Pfam:PF06689 Pfam:PF07724 SMART:SM00382 SMART:SM00994 GO:GO:0005524
GO:GO:0006457 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0017111 GO:GO:0008233
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1219
KO:K03544 OMA:SDLELEH ProtClustDB:PRK05342 PANTHER:PTHR11262:SF4
TIGRFAMs:TIGR00382 PIR:F82139 RefSeq:NP_231555.1
ProteinModelPortal:Q9KQS7 SMR:Q9KQS7 PRIDE:Q9KQS7 DNASU:2613550
GeneID:2613550 KEGG:vch:VC1921 PATRIC:20082886 Uniprot:Q9KQS7
Length = 426
Score = 310 (114.2 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
Identities = 61/141 (43%), Positives = 95/141 (67%)
Query: 101 AAVSAEEDNKEKDAFLKQVEARDLIDFGMIPEFVGRFPILVPFHSLNQELLVRILTEPKN 160
A V +++++K QVE DL+ +G+IPEF+GR P+ L++ L++IL EPKN
Sbjct: 274 ADVRSKDNSKTLSELFTQVEPEDLVKYGLIPEFIGRLPVTATLTELDEAALIQILCEPKN 333
Query: 161 AMIQQYQILFTMDKVDLTFSPEALQAIARLALEKKTGARGLRAIMESLLLDSMYEVPG-S 219
A+ +QY LF ++ VDL F +AL+AIA A+++KTGARGLR+I+E++LL++MYE+P
Sbjct: 334 ALTKQYAALFELENVDLEFREDALKAIAAKAMKRKTGARGLRSILEAVLLETMYELPSME 393
Query: 220 DILMVHITEDTVLKNTAPSYI 240
++ V I E + +AP I
Sbjct: 394 EVSKVVIDESVINGESAPLLI 414
Score = 127 (49.8 bits), Expect = 1.9e-39, Sum P(2) = 1.9e-39
Identities = 26/62 (41%), Positives = 41/62 (66%)
Query: 20 LLCMLEGTIVNVPEKNSPRKLRGEMVQVDTTNILFVASGAYNGLDRLISRR-KNEKYLGF 78
LL ++EGT+ +VP + + + E +QVDT+ ILF+ GA+ GLD++I +R +GF
Sbjct: 213 LLKLIEGTVASVPPQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIEQRVATGTGIGF 272
Query: 79 GA 80
GA
Sbjct: 273 GA 274
>WB|WBGene00019461 [details] [associations]
symbol:K07A3.3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR004487 InterPro:IPR013093
Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0006457
GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1219 HOGENOM:HOG000010093 PANTHER:PTHR11262:SF4
GeneTree:ENSGT00390000017625 EMBL:FO080962 GeneID:171817
KEGG:cel:CELE_K07A3.3 CTD:171817 RefSeq:NP_001021562.1
ProteinModelPortal:Q65XY4 SMR:Q65XY4 STRING:Q65XY4 PRIDE:Q65XY4
EnsemblMetazoa:K07A3.3b UCSC:K07A3.3b WormBase:K07A3.3b
InParanoid:Q65XY4 OMA:PFHCLDK NextBio:872825 ArrayExpress:Q65XY4
Uniprot:Q65XY4
Length = 518
Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
Identities = 86/213 (40%), Positives = 140/213 (65%)
Query: 20 LLCMLEGTIVNVPEKNSPRKLRGEMVQVDTTNILFVASGAYNGLDRLISRRKNEKYLGF- 78
LL ++EG++V V + +P V +DT+NILF+ASGA++ ++ +++RR +++ LGF
Sbjct: 295 LLKLVEGSLVKVRDPLAPNS----KVTIDTSNILFIASGAFSNIEHIVARRMDKRSLGFL 350
Query: 79 GAPSTESAGRRAASLADLANQSAAVSAEEDNKEKDAFLKQVEARDLIDFGMIPEFVGRFP 138
A S G + D + E +K ++ +KQ + DLI FGMIPE VGRFP
Sbjct: 351 SATSPHKLGDQ-----DTTEKLRDSDEEIVSKARNEMIKQCDQGDLISFGMIPELVGRFP 405
Query: 139 ILVPFHSLNQELLVRILTEPKNAMIQQYQILFTMDKVDLTFSPEALQAIARLALEKKTGA 198
++VPFH L++ L+ +LTEP+ ++I Q + F + V+L FSP A++AIA +A+++KTGA
Sbjct: 406 VIVPFHCLDKTHLMSVLTEPRGSLIAQTKKFFENENVELRFSPAAIEAIAEMAVKRKTGA 465
Query: 199 RGLRAIMESLLLDSMYEVPGSDILMVHITEDTV 231
R L++I+E ++++ YEVPGSD+ V IT+ +
Sbjct: 466 RALKSIVEKAVMNAKYEVPGSDVKCVEITDQNL 498
>TAIR|locus:2006942 [details] [associations]
symbol:AT1G33360 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0006457 "protein folding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0051082 "unfolded protein binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR013093 Pfam:PF07724 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0006457 GO:GO:0006508
GO:GO:0017111 GO:GO:0008233 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 EMBL:BT015363
EMBL:BT015893 IPI:IPI00536875 RefSeq:NP_564423.3 UniGene:At.39953
ProteinModelPortal:Q66GN9 SMR:Q66GN9 STRING:Q66GN9 PaxDb:Q66GN9
PRIDE:Q66GN9 EnsemblPlants:AT1G33360.1 GeneID:840230
KEGG:ath:AT1G33360 TAIR:At1g33360 InParanoid:Q66GN9 OMA:KEICKWL
PhylomeDB:Q66GN9 ProtClustDB:CLSN2690007 Genevestigator:Q66GN9
Uniprot:Q66GN9
Length = 656
Score = 416 (151.5 bits), Expect = 1.7e-38, P = 1.7e-38
Identities = 88/198 (44%), Positives = 135/198 (68%)
Query: 20 LLCMLEGTIVNVPEKNSPRKLRGEMVQVDTTNILFVASGAYNGLDRLISRRKNEKYLGFG 79
LL +LEGTIVNVP K + + RG+ +Q+DT +ILF+ GA+ L++ I R+ + +GFG
Sbjct: 407 LLKLLEGTIVNVPGKGARKHPRGDHIQIDTKDILFICGGAFVDLEKTIVDRRQDSSIGFG 466
Query: 80 APSTESAGRRAASLADLANQSAAVSAEEDNKEKDAFLKQVEARDLIDFGMIPEFVGRFPI 139
AP A++A S A+++ + L+ VE+ DL +G+IPEFVGRFPI
Sbjct: 467 APVR-------ANMATSGVTSGAITS--------SLLESVESADLTAYGLIPEFVGRFPI 511
Query: 140 LVPFHSLNQELLVRILTEPKNAMIQQYQILFTMDKVDLTFSPEALQAIARLALEKKTGAR 199
LV +L ++ L+R+L EPKNA+ +QY+ LF+M+ V L F+ +AL+ I++ A+ K TGAR
Sbjct: 512 LVSLSALTEDQLIRVLVEPKNALGKQYKKLFSMNNVKLHFTEKALEIISKQAMVKNTGAR 571
Query: 200 GLRAIMESLLLDSMYEVP 217
GLRA++ES+L ++M+E+P
Sbjct: 572 GLRALLESILTEAMFEIP 589
>TAIR|locus:2155446 [details] [associations]
symbol:AT5G49840 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006457 "protein folding" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0051082 "unfolded protein binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR013093 Pfam:PF07724 SMART:SM00382 GO:GO:0005524
EMBL:CP002688 GO:GO:0006457 GO:GO:0006508 GO:GO:0017111
GO:GO:0008233 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
KO:K03544 PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 IPI:IPI00522644
RefSeq:NP_568714.4 UniGene:At.49150 ProteinModelPortal:F4K7F6
SMR:F4K7F6 PRIDE:F4K7F6 EnsemblPlants:AT5G49840.1 GeneID:835047
KEGG:ath:AT5G49840 OMA:ASESYNI Uniprot:F4K7F6
Length = 608
Score = 406 (148.0 bits), Expect = 1.2e-37, P = 1.2e-37
Identities = 91/202 (45%), Positives = 139/202 (68%)
Query: 20 LLCMLEGTIVNVP--EKNSPRKLRGEMVQVDTTNILFVASGAYNGLDRLISRRKNEKYLG 77
LL +LEGT+V+VP EK R RG+ +Q+DT +ILF+ GA+ L++ +S R+++ +G
Sbjct: 361 LLKLLEGTVVSVPIPEKGLRRDPRGDSIQMDTKDILFICGGAFIDLEKTVSERQHDASIG 420
Query: 78 FGAPSTESAGRRAASLADLANQSAAVSAEEDNKEKDAFLKQVEARDLIDFGMIPEFVGRF 137
FGA + R S + L+ SAAV++ + L+ +++ DL+ +G+IPEFVGR
Sbjct: 421 FGA-----SVRTNMSTSGLS--SAAVTS--------SLLESLQSEDLVAYGLIPEFVGRL 465
Query: 138 PILVPFHSLNQELLVRILTEPKNAMIQQYQILFTMDKVDLTFSPEALQAIARLALEKKTG 197
PILV +LN++ LV++LTEPK+A+ +QY+ LF M+ V L F+ A + IAR A+ K TG
Sbjct: 466 PILVSLSALNEDQLVQVLTEPKSALGKQYKKLFRMNNVQLQFTEGATRLIARKAMSKNTG 525
Query: 198 ARGLRAIMESLLLDSMYEVPGS 219
ARGLR+I+ES+L ++M+EVP S
Sbjct: 526 ARGLRSILESILTEAMFEVPDS 547
>TIGR_CMR|APH_0969 [details] [associations]
symbol:APH_0969 "ATP-dependent Clp protease, ATP-binding
subunit ClpX" species:212042 "Anaplasma phagocytophilum HZ"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0006457 "protein
folding" evidence=ISS] [GO:0009368 "endopeptidase Clp complex"
evidence=ISS] [GO:0042623 "ATPase activity, coupled" evidence=ISS]
HAMAP:MF_00175 InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR010603 InterPro:IPR013093 Pfam:PF06689 Pfam:PF07724
SMART:SM00382 SMART:SM00994 GO:GO:0005524 GO:GO:0006457
GO:GO:0046872 GO:GO:0008270 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0017111 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
RefSeq:YP_505536.1 ProteinModelPortal:Q2GJB5 SMR:Q2GJB5
STRING:Q2GJB5 PRIDE:Q2GJB5 GeneID:3930607 KEGG:aph:APH_0969
PATRIC:20950654 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
OMA:SDLELEH ProtClustDB:PRK05342 BioCyc:APHA212042:GHPM-981-MONOMER
PANTHER:PTHR11262:SF4 TIGRFAMs:TIGR00382 Uniprot:Q2GJB5
Length = 415
Score = 297 (109.6 bits), Expect = 4.8e-37, Sum P(2) = 4.8e-37
Identities = 62/133 (46%), Positives = 86/133 (64%)
Query: 86 AGRRAASLADLANQSAAVSAEEDNKEKDAFLKQVEARDLIDFGMIPEFVGRFPILVPFHS 145
A R +S+ AN + VS +D L E DL+ FG+IPEF+GR P++
Sbjct: 253 ARNRGSSMGFEANVQSMVSPTKD------VLSYAEPEDLVKFGLIPEFIGRIPVITSLGK 306
Query: 146 LNQELLVRILTEPKNAMIQQYQILFTMDKVDLTFSPEALQAIARLALEKKTGARGLRAIM 205
L++ L R+L EPKN++++QY LF MD ++L F +AL AIAR A+++ TGARGLRAIM
Sbjct: 307 LDENTLFRVLVEPKNSLVKQYAKLFEMDNLELKFDDDALMAIARKAVDRNTGARGLRAIM 366
Query: 206 ESLLLDSMYEVPG 218
ESLLLD M++ G
Sbjct: 367 ESLLLDFMFDPQG 379
Score = 122 (48.0 bits), Expect = 4.8e-37, Sum P(2) = 4.8e-37
Identities = 23/61 (37%), Positives = 38/61 (62%)
Query: 20 LLCMLEGTIVNVPEKNSPRKLRGEMVQVDTTNILFVASGAYNGLDRLISRRKNEKYLGFG 79
LL ++EGT+ +VP + + E +Q+ T NILF+ GA++GL+++I R +GF
Sbjct: 204 LLKVIEGTVSSVPPQGGRKHPHQEFIQISTDNILFIFGGAFDGLEKIIEARNRGSSMGFE 263
Query: 80 A 80
A
Sbjct: 264 A 264
>SGD|S000000431 [details] [associations]
symbol:MCX1 "Mitochondrial matrix protein" species:4932
"Saccharomyces cerevisiae" [GO:0005759 "mitochondrial matrix"
evidence=IEA;IDA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA;IDA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0051082 "unfolded protein binding"
evidence=IEA] [GO:0042026 "protein refolding" evidence=IMP]
[GO:0006457 "protein folding" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR003593
InterPro:IPR004487 InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
SGD:S000000431 GO:GO:0005524 GO:GO:0005759 EMBL:BK006936
GO:GO:0017111 GO:GO:0042026 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
PANTHER:PTHR11262:SF4 GeneTree:ENSGT00390000017625 EMBL:Z36096
PIR:S46103 RefSeq:NP_009786.1 ProteinModelPortal:P38323 SMR:P38323
DIP:DIP-6422N IntAct:P38323 MINT:MINT-4477678 STRING:P38323
PaxDb:P38323 EnsemblFungi:YBR227C GeneID:852528 KEGG:sce:YBR227C
CYGD:YBR227c OMA:QMASSEL OrthoDB:EOG4FXVH6 NextBio:971574
Genevestigator:P38323 GermOnline:YBR227C Uniprot:P38323
Length = 520
Score = 331 (121.6 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 78/203 (38%), Positives = 114/203 (56%)
Query: 33 EKNSPRKLRGEMVQVDTTNILFVASGAYNGLDR-LISRRKNEKYLGFGAPSTESAGRRAA 91
+KN + E+ VDT+NILF+ GA+ GLD+ ++ R ++ K + S ES+ +
Sbjct: 255 QKNQTTTKKDEVFVVDTSNILFMIMGAFVGLDKHIVKRIEDMKKIQKAGESVESSNSKEV 314
Query: 92 SLADLAN---QSAAVSAEEDNKEKDAFLKQVEARDLIDFGMIPEFVGRFPILVPFHSLNQ 148
+ E DN +K L DL+ FG+IPE +GR PI+ L +
Sbjct: 315 EKERAKKFRFSNTLEQVELDNGKKVCALDLTTPTDLVSFGLIPELIGRVPIITALQPLQR 374
Query: 149 ELLVRILTEPKNAMIQQYQILFTMDKVDLTFSPEALQAIARLALEKKTGARGLRAIMESL 208
+ L IL EPKNA++ QY+ +F V L + +AL+ +A+ AL++ TGARGLR IME L
Sbjct: 375 DDLFHILKEPKNALLDQYEYIFKQFGVRLCVTQKALKKVAQFALKEGTGARGLRGIMERL 434
Query: 209 LLDSMYEVPGSDILMVHITEDTV 231
LL+ Y+ PGS+I V I E TV
Sbjct: 435 LLNVNYDCPGSNIAYVLIDEATV 457
>ASPGD|ASPL0000057717 [details] [associations]
symbol:AN0349 species:162425 "Emericella nidulans"
[GO:0042026 "protein refolding" evidence=IEA] [GO:0005759
"mitochondrial matrix" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR004487
InterPro:IPR013093 Pfam:PF07724 SMART:SM00382 GO:GO:0005524
GO:GO:0006457 EMBL:BN001308 GO:GO:0006508 GO:GO:0017111
GO:GO:0008233 EMBL:AACD01000006 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 eggNOG:COG1219 HOGENOM:HOG000010093 KO:K03544
PANTHER:PTHR11262:SF4 OrthoDB:EOG4FXVH6 RefSeq:XP_657953.1
ProteinModelPortal:Q5BGI1 STRING:Q5BGI1
EnsemblFungi:CADANIAT00002357 GeneID:2876125 KEGG:ani:AN0349.2
OMA:DAMFETP Uniprot:Q5BGI1
Length = 630
Score = 272 (100.8 bits), Expect = 9.1e-29, Sum P(3) = 9.1e-29
Identities = 56/128 (43%), Positives = 80/128 (62%)
Query: 116 LKQVEARDLIDFGMIPEFVGRFPILVPFHSLNQELLVRILTEPKNAMIQQYQILFTMDKV 175
L + DL ++G IPE VGR P+ +L+Q LLVRILTEP+N+++ QY LF++ +
Sbjct: 449 LDLINQTDLQNYGFIPELVGRIPVNAALSALSQPLLVRILTEPRNSLVAQYTTLFSLSGI 508
Query: 176 DLTFSPEALQAIARLALEKKTGARGLRAIMESLLLDSMYEVPGSDILMVHITEDTVLKNT 235
+L F+ AL IA A TGAR LR ME++L D+M+E PGS + V +TE+ +
Sbjct: 509 ELRFTTPALHKIAANAFTMGTGARALRTEMETILSDAMFETPGSSVKFVLVTENVAERKE 568
Query: 236 APSYI-RG 242
P Y+ RG
Sbjct: 569 KPVYLGRG 576
Score = 102 (41.0 bits), Expect = 9.1e-29, Sum P(3) = 9.1e-29
Identities = 28/79 (35%), Positives = 42/79 (53%)
Query: 35 NSPRKLRGEMVQVDTTNILFVASGAYNGLDRLISRRKNEKYLGFGAP---STESAGRRAA 91
N P K GE+ V T NILF+ SGA+ GL +++ R + +GFG P +++ R
Sbjct: 345 NVPHK--GEVYNVRTDNILFICSGAFAGLHKVVMDRISRGSMGFGQPVRNPPQTSTDRPH 402
Query: 92 SLADLANQSAAV--SAEED 108
S ANQ + +EE+
Sbjct: 403 SYDSTANQPVPILPGSEEE 421
Score = 41 (19.5 bits), Expect = 9.1e-29, Sum P(3) = 9.1e-29
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 20 LLCMLEGTIVNVP---EKNSPR 38
LL +LEGT V V E+++PR
Sbjct: 297 LLKLLEGTTVQVQAKQERSAPR 318
>TIGR_CMR|CJE_0764 [details] [associations]
symbol:CJE_0764 "heat shock protein HslVU, ATPase subunit
HslU" species:195099 "Campylobacter jejuni RM1221" [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_00249 InterPro:IPR003593
InterPro:IPR004491 InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
GO:GO:0005524 GO:GO:0006200 GO:GO:0016887 EMBL:CP000025
GenomeReviews:CP000025_GR InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 RefSeq:YP_178773.1 ProteinModelPortal:Q5HVB2
SMR:Q5HVB2 STRING:Q5HVB2 GeneID:3230716 KEGG:cjr:CJE0764
PATRIC:20043261 eggNOG:COG1220 HOGENOM:HOG000010036 KO:K03667
OMA:KYGMIKT ProtClustDB:PRK05201 BioCyc:CJEJ195099:GJC0-780-MONOMER
GO:GO:0009376 GO:GO:0070011 PANTHER:PTHR11262:SF3
TIGRFAMs:TIGR00390 Uniprot:Q5HVB2
Length = 439
Score = 165 (63.1 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 36/92 (39%), Positives = 56/92 (60%)
Query: 129 MIPEFVGRFPILVPFHSLNQELLVRILTEPKNAMIQQYQILFTMDKVDLTFSPEALQAIA 188
+IPE GRFP+ V SL+ + L ILT PKN++++QY L + ++L F+ EA++ IA
Sbjct: 314 LIPELQGRFPLRVELDSLDDKALYEILTRPKNSLLKQYSQLLKTENLELEFNDEAIKEIA 373
Query: 189 RLALE-----KKTGARGLRAIMESLLLDSMYE 215
++A + GAR L ++E LL D +E
Sbjct: 374 KIASRANEEMQDIGARRLHTVIEKLLEDLSFE 405
Score = 41 (19.5 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 7/13 (53%), Positives = 12/13 (92%)
Query: 49 TTNILFVASGAYN 61
T +ILF+A+GA++
Sbjct: 295 TDHILFIAAGAFH 307
>TIGR_CMR|SPO_3882 [details] [associations]
symbol:SPO_3882 "heat shock protein HslVU, ATPase subunit
HslU" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_00249 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004491 InterPro:IPR013093
Pfam:PF00004 Pfam:PF07724 SMART:SM00382 GO:GO:0005524 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0006200 GO:GO:0016887
InterPro:IPR019489 SMART:SM01086 eggNOG:COG1220
HOGENOM:HOG000010036 KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201
GO:GO:0009376 GO:GO:0070011 PANTHER:PTHR11262:SF3
TIGRFAMs:TIGR00390 RefSeq:YP_169070.1 ProteinModelPortal:Q5LLP0
SMR:Q5LLP0 GeneID:3196200 KEGG:sil:SPO3882 PATRIC:23381271
Uniprot:Q5LLP0
Length = 435
Score = 153 (58.9 bits), Expect = 9.6e-09, Sum P(2) = 9.6e-09
Identities = 35/94 (37%), Positives = 52/94 (55%)
Query: 129 MIPEFVGRFPILVPFHSLNQELLVRILTEPKNAMIQQYQILFTMDKVDLTFSPEALQAIA 188
++PE GR PI V +L +E VRILTE NA+ QY L + V +TF+P+ + A+A
Sbjct: 310 LLPELQGRLPIRVELRALTEEDFVRILTETDNALTLQYTALMGTENVAVTFTPDGIAALA 369
Query: 189 RLALE-----KKTGARGLRAIMESLLLDSMYEVP 217
+A E + GAR L +ME + + + P
Sbjct: 370 HIAAEVNQSVENIGARRLYTVMERVFEELSFTAP 403
Score = 49 (22.3 bits), Expect = 9.6e-09, Sum P(2) = 9.6e-09
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 20 LLCMLEGTIVNVPEKNSPRKLRGEMVQVDTTNILFVASGAYN 61
LL ++EGT V+ K P K T +ILF+ASGA++
Sbjct: 273 LLPLIEGTTVST--KYGPIK---------TDHILFIASGAFH 303
>TIGR_CMR|CBU_2012 [details] [associations]
symbol:CBU_2012 "heat shock protein HslVU, ATPase subunit
HslU" species:227377 "Coxiella burnetii RSA 493" [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_00249 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004491 InterPro:IPR013093
Pfam:PF00004 Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0006200
GO:GO:0016887 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1220
HOGENOM:HOG000010036 KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201
GO:GO:0009376 GO:GO:0070011 PANTHER:PTHR11262:SF3
TIGRFAMs:TIGR00390 RefSeq:NP_820987.2 ProteinModelPortal:Q83A94
SMR:Q83A94 PRIDE:Q83A94 GeneID:1209925 KEGG:cbu:CBU_2012
PATRIC:17932769 BioCyc:CBUR227377:GJ7S-1986-MONOMER Uniprot:Q83A94
Length = 447
Score = 152 (58.6 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 38/110 (34%), Positives = 58/110 (52%)
Query: 129 MIPEFVGRFPILVPFHSLNQELLVRILTEPKNAMIQQYQILFTMDKVDLTFSPEALQAIA 188
++PE GRFPI V +L + VRILTEPK ++ +QY L + L+F+ + ++ +A
Sbjct: 322 LVPELQGRFPIRVELKALTADDFVRILTEPKASLTEQYTELLKTENFGLSFTKDGIKRLA 381
Query: 189 RLALE-----KKTGARGLRAIMESLLLDSMYEVPGSDILMVHITEDTVLK 233
+A + + GAR L IME LL + +E + I D V K
Sbjct: 382 EIAYQVNDRSENIGARRLHTIMERLLEEVSFEATDKQGESITIDADYVNK 431
Score = 47 (21.6 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 9/15 (60%), Positives = 13/15 (86%)
Query: 47 VDTTNILFVASGAYN 61
V T +ILF+ASGA++
Sbjct: 301 VKTDHILFIASGAFH 315
>TIGR_CMR|CHY_1790 [details] [associations]
symbol:CHY_1790 "heat shock protein HslVU, ATPase subunit
HslU" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_00249
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR004491
InterPro:IPR013093 Pfam:PF00004 Pfam:PF07724 SMART:SM00382
GO:GO:0005524 GO:GO:0006950 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0006200 GO:GO:0016887 InterPro:IPR019489 Pfam:PF10431
SMART:SM01086 eggNOG:COG1220 HOGENOM:HOG000010036 KO:K03667
OMA:KYGMIKT ProtClustDB:PRK05201 GO:GO:0009376 GO:GO:0070011
PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390 RefSeq:YP_360610.1
ProteinModelPortal:Q3AB74 SMR:Q3AB74 STRING:Q3AB74 GeneID:3728442
KEGG:chy:CHY_1790 PATRIC:21276691
BioCyc:CHYD246194:GJCN-1789-MONOMER Uniprot:Q3AB74
Length = 461
Score = 152 (58.6 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 37/94 (39%), Positives = 54/94 (57%)
Query: 129 MIPEFVGRFPILVPFHSLNQELLVRILTEPKNAMIQQYQILFTMDKVDLTFSPEALQAIA 188
+IPE GRFPI V SL E +ILT P+NA+ +QY L + V+L F+ ++L+ IA
Sbjct: 336 LIPELQGRFPIRVELKSLTVEDFKKILTVPENALTKQYVELLATEGVNLKFTEDSLEEIA 395
Query: 189 RLAL-----EKKTGARGLRAIMESLLLDSMYEVP 217
++A + GAR L I+E +L D + P
Sbjct: 396 KMAYTVNERNENIGARRLITILEKVLEDLSFNAP 429
Score = 44 (20.5 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 8/15 (53%), Positives = 13/15 (86%)
Query: 47 VDTTNILFVASGAYN 61
V T +ILF+A+GA++
Sbjct: 315 VKTDHILFIAAGAFH 329
>DICTYBASE|DDB_G0288593 [details] [associations]
symbol:DDB_G0288593 "ATP-dependent hsl protease
ATP-binding subunit hslU" species:44689 "Dictyostelium discoideum"
[GO:0070011 "peptidase activity, acting on L-amino acid peptides"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0009376 "HslUV protease complex" evidence=IEA] [GO:0006200 "ATP
catabolic process" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR004491 InterPro:IPR013093 Pfam:PF07724 SMART:SM00382
dictyBase:DDB_G0288593 GO:GO:0005524 GO:GO:0006200 GO:GO:0016887
EMBL:AAFI02000117 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1220 KO:K03667 GO:GO:0009376 GO:GO:0070011
PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390 RefSeq:XP_636662.1
ProteinModelPortal:Q54IQ2 SMR:Q54IQ2 STRING:Q54IQ2
EnsemblProtists:DDB0188012 GeneID:8626708 KEGG:ddi:DDB_G0288593
InParanoid:Q54IQ2 OMA:IAFEANA Uniprot:Q54IQ2
Length = 694
Score = 140 (54.3 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 34/88 (38%), Positives = 49/88 (55%)
Query: 129 MIPEFVGRFPILVPFHSLNQELLVRILTEPKNAMIQQYQILFTMDKVDLTFSPEALQAIA 188
+I E GR PI V L Q+ +ILTEPKN IQQ + L + + L F+ +AL +A
Sbjct: 569 LISELQGRLPIRVELKPLEQKDFYKILTEPKNNQIQQQKALLKTEDIQLEFTDDALLEVA 628
Query: 189 RLALE-----KKTGARGLRAIMESLLLD 211
++A E + GAR L I+E ++ D
Sbjct: 629 KIAFEANAQVQNLGARRLHGIIERIVED 656
Score = 59 (25.8 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 10/16 (62%), Positives = 15/16 (93%)
Query: 46 QVDTTNILFVASGAYN 61
Q+DT+ ILF+ASGA++
Sbjct: 547 QIDTSRILFIASGAFH 562
>TIGR_CMR|APH_1074 [details] [associations]
symbol:APH_1074 "ATP-dependent Hsl protease, ATP-binding
subunit HslU" species:212042 "Anaplasma phagocytophilum HZ"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR004491 InterPro:IPR013093 Pfam:PF00004 Pfam:PF07724
SMART:SM00382 GO:GO:0005524 GO:GO:0006200 GO:GO:0006508
GO:GO:0016887 EMBL:CP000235 GenomeReviews:CP000235_GR
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1220
HOGENOM:HOG000010036 KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201
GO:GO:0009376 GO:GO:0070011 PANTHER:PTHR11262:SF3
TIGRFAMs:TIGR00390 RefSeq:YP_505627.1 ProteinModelPortal:Q2GJ24
SMR:Q2GJ24 STRING:Q2GJ24 GeneID:3931122 KEGG:aph:APH_1074
PATRIC:20950902 BioCyc:APHA212042:GHPM-1080-MONOMER Uniprot:Q2GJ24
Length = 437
Score = 146 (56.5 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 35/91 (38%), Positives = 53/91 (58%)
Query: 129 MIPEFVGRFPILVPFHSLNQELLVRILTEPKNAMIQQYQILFTMDKVDLTFSPEALQAIA 188
++PE GR PI V L+++ LVRILTEP+ +++QY+ L + V + F+ + + AIA
Sbjct: 312 LLPELQGRLPIRVELQPLSRDDLVRILTEPEANLLKQYRALLETEGVTVEFTEDGIFAIA 371
Query: 189 RLALE-----KKTGARGLRAIMESLLLDSMY 214
+A + GAR L IME L+ D Y
Sbjct: 372 EIASTVNREVENIGARRLHTIMEKLMEDISY 402
Score = 46 (21.3 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 8/15 (53%), Positives = 13/15 (86%)
Query: 47 VDTTNILFVASGAYN 61
V T ++LF+ASGA++
Sbjct: 291 VTTDHVLFIASGAFH 305
>TIGR_CMR|ECH_0997 [details] [associations]
symbol:ECH_0997 "heat shock protein HslVU, ATPase subunit
HslU" species:205920 "Ehrlichia chaffeensis str. Arkansas"
[GO:0016887 "ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004491 InterPro:IPR013093
Pfam:PF00004 Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0006950
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0006200 GO:GO:0016887
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1220
HOGENOM:HOG000010036 KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201
GO:GO:0009376 GO:GO:0070011 PANTHER:PTHR11262:SF3
TIGRFAMs:TIGR00390 RefSeq:YP_507784.1 ProteinModelPortal:Q2GFJ9
SMR:Q2GFJ9 STRING:Q2GFJ9 GeneID:3927521 KEGG:ech:ECH_0997
PATRIC:20577368 BioCyc:ECHA205920:GJNR-1000-MONOMER Uniprot:Q2GFJ9
Length = 487
Score = 147 (56.8 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 33/91 (36%), Positives = 53/91 (58%)
Query: 129 MIPEFVGRFPILVPFHSLNQELLVRILTEPKNAMIQQYQILFTMDKVDLTFSPEALQAIA 188
++PE GR PI V L+++ LVRILTEP++++++QY L + + + F+ E + IA
Sbjct: 362 LLPELQGRLPIRVELKPLSKDDLVRILTEPESSLLKQYCALMKTENITIDFTDEGVSTIA 421
Query: 189 RLALE-----KKTGARGLRAIMESLLLDSMY 214
+A + GAR L I+E L+ D Y
Sbjct: 422 EIASTVNREVENIGARRLHTILEKLMEDISY 452
Score = 46 (21.3 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 8/15 (53%), Positives = 13/15 (86%)
Query: 47 VDTTNILFVASGAYN 61
+ T +ILF+ASGA++
Sbjct: 341 ITTDHILFIASGAFH 355
>TIGR_CMR|NSE_0177 [details] [associations]
symbol:NSE_0177 "heat shock protein HslVU, ATPase subunit
HslU" species:222891 "Neorickettsia sennetsu str. Miyayama"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0009376 "HslUV protease
complex" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR004491
InterPro:IPR013093 Pfam:PF00004 Pfam:PF07724 SMART:SM00382
GO:GO:0005524 GO:GO:0006950 GO:GO:0006200 GO:GO:0016887
EMBL:CP000237 GenomeReviews:CP000237_GR InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 eggNOG:COG1220 HOGENOM:HOG000010036
KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201 GO:GO:0009376
GO:GO:0070011 PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390
RefSeq:YP_506072.1 ProteinModelPortal:Q2GEM4 SMR:Q2GEM4
STRING:Q2GEM4 GeneID:3931406 KEGG:nse:NSE_0177 PATRIC:22680453
BioCyc:NSEN222891:GHFU-208-MONOMER Uniprot:Q2GEM4
Length = 472
Score = 148 (57.2 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 35/92 (38%), Positives = 56/92 (60%)
Query: 129 MIPEFVGRFPILVPFHSLNQELLVRILTEPKNAMIQQYQILFTMDKVDLTFSPEALQAIA 188
++PE GR PI V SL+ E ++RILTE ++++++QY L + V L F+ + ++AIA
Sbjct: 347 LLPELQGRLPIRVELDSLDVEDMIRILTETESSLLKQYCALLETEGVSLEFTKDGVRAIA 406
Query: 189 RLALE-----KKTGARGLRAIMESLLLDSMYE 215
A+ + GAR L IME+LL + +E
Sbjct: 407 EAAITVNNEVENIGARRLHTIMETLLEEINFE 438
Score = 44 (20.5 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 9/15 (60%), Positives = 12/15 (80%)
Query: 47 VDTTNILFVASGAYN 61
V T +ILFV SGA++
Sbjct: 326 VKTDHILFVGSGAFH 340
>TIGR_CMR|SO_4163 [details] [associations]
symbol:SO_4163 "heat shock protein HslVU, ATPase subunit
HslU" species:211586 "Shewanella oneidensis MR-1" [GO:0005524 "ATP
binding" evidence=ISS] [GO:0009376 "HslUV protease complex"
evidence=ISS] HAMAP:MF_00249 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR004491 InterPro:IPR013093 Pfam:PF00004 Pfam:PF07724
SMART:SM00382 GO:GO:0005524 GO:GO:0006200 GO:GO:0016887
EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR019489
Pfam:PF10431 SMART:SM01086 eggNOG:COG1220 HOGENOM:HOG000010036
KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201 GO:GO:0009376
GO:GO:0070011 PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390
RefSeq:NP_719692.1 ProteinModelPortal:Q8E9U9 SMR:Q8E9U9
GeneID:1171770 KEGG:son:SO_4163 PATRIC:23527956 Uniprot:Q8E9U9
Length = 440
Score = 139 (54.0 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 34/92 (36%), Positives = 52/92 (56%)
Query: 129 MIPEFVGRFPILVPFHSLNQELLVRILTEPKNAMIQQYQILFTMDKVDLTFSPEALQAIA 188
+IPE GR PI V +L + RILTEP ++ +QY L + V + F+ +++IA
Sbjct: 315 LIPELQGRLPIRVELDALTADDFKRILTEPHASLTEQYIALMATEGVIIEFTESGIESIA 374
Query: 189 RLA--LEKKT---GARGLRAIMESLLLDSMYE 215
+ A + ++T GAR L +ME L+ D YE
Sbjct: 375 KAAWQVNERTENIGARRLHTVMEKLMEDISYE 406
Score = 46 (21.3 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 9/14 (64%), Positives = 12/14 (85%)
Query: 47 VDTTNILFVASGAY 60
V T +ILF+ASGA+
Sbjct: 294 VKTDHILFIASGAF 307
>TIGR_CMR|CPS_4370 [details] [associations]
symbol:CPS_4370 "heat shock protein HslVU, ATPase subunit
HslU" species:167879 "Colwellia psychrerythraea 34H" [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_00249 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004491 InterPro:IPR013093
Pfam:PF00004 Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0006950
GO:GO:0006200 GO:GO:0016887 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 HSSP:P0A6H5
eggNOG:COG1220 HOGENOM:HOG000010036 KO:K03667 OMA:KYGMIKT
ProtClustDB:PRK05201 GO:GO:0009376 GO:GO:0070011
PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390 RefSeq:YP_271019.1
ProteinModelPortal:Q47W03 SMR:Q47W03 STRING:Q47W03 GeneID:3518888
KEGG:cps:CPS_4370 PATRIC:21471585
BioCyc:CPSY167879:GI48-4379-MONOMER Uniprot:Q47W03
Length = 443
Score = 136 (52.9 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 34/88 (38%), Positives = 50/88 (56%)
Query: 129 MIPEFVGRFPILVPFHSLNQELLVRILTEPKNAMIQQYQILFTMDKVDLTFSPEALQAIA 188
+IPE GR PI V +L + VRILTEP ++ +QY L + V +TF+ + ++AIA
Sbjct: 318 LIPELQGRLPIRVELQALTADDFVRILTEPFASLTEQYIALLATEGVSVTFTDDGIKAIA 377
Query: 189 RLALE-----KKTGARGLRAIMESLLLD 211
A + + GAR L +ME L+ D
Sbjct: 378 DSAWQVNETTENIGARRLHTMMERLVED 405
Score = 45 (20.9 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 8/14 (57%), Positives = 12/14 (85%)
Query: 47 VDTTNILFVASGAY 60
+ T +ILF+ASGA+
Sbjct: 297 IKTDHILFIASGAF 310
>UNIPROTKB|P43773 [details] [associations]
symbol:hslU "ATP-dependent protease ATPase subunit HslU"
species:71421 "Haemophilus influenzae Rd KW20" [GO:0005515 "protein
binding" evidence=IPI] HAMAP:MF_00249 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004491 InterPro:IPR013093
Pfam:PF00004 Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0006200
GO:GO:0016887 EMBL:L42023 GenomeReviews:L42023_GR
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1220
KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201 GO:GO:0009376
GO:GO:0070011 PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390
RefSeq:NP_438655.1 PDB:1G3I PDB:1G41 PDB:1IM2 PDB:1KYI PDB:1OFH
PDB:1OFI PDBsum:1G3I PDBsum:1G41 PDBsum:1IM2 PDBsum:1KYI
PDBsum:1OFH PDBsum:1OFI ProteinModelPortal:P43773 SMR:P43773
DIP:DIP-6175N IntAct:P43773 GeneID:950614 KEGG:hin:HI0497
PATRIC:20189545 EvolutionaryTrace:P43773 Uniprot:P43773
Length = 444
Score = 135 (52.6 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 33/86 (38%), Positives = 51/86 (59%)
Query: 129 MIPEFVGRFPILVPFHSLNQELLVRILTEPKNAMIQQYQILFTMDKVDLTFSPEALQAIA 188
+IPE GR PI V +L+ RILTEP ++ +QY+ L + V++ F+ +A++ IA
Sbjct: 319 LIPELQGRLPIRVELTALSAADFERILTEPHASLTEQYKALMATEGVNIAFTTDAVKKIA 378
Query: 189 RLA--LEKKT---GARGLRAIMESLL 209
A + +KT GAR L +ME L+
Sbjct: 379 EAAFRVNEKTENIGARRLHTVMERLM 404
Score = 46 (21.3 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 9/14 (64%), Positives = 12/14 (85%)
Query: 47 VDTTNILFVASGAY 60
V T +ILF+ASGA+
Sbjct: 298 VKTDHILFIASGAF 311
>UNIPROTKB|Q9KNQ7 [details] [associations]
symbol:hslU "ATP-dependent protease ATPase subunit HslU"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0008233 "peptidase
activity" evidence=ISS] HAMAP:MF_00249 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004491 InterPro:IPR013093
Pfam:PF00004 Pfam:PF07724 SMART:SM00382 GO:GO:0005524 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006200 GO:GO:0006508 GO:GO:0016887
GO:GO:0008233 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1220 KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201
GO:GO:0009376 GO:GO:0070011 PANTHER:PTHR11262:SF3
TIGRFAMs:TIGR00390 PIR:E82046 RefSeq:NP_232302.1
ProteinModelPortal:Q9KNQ7 SMR:Q9KNQ7 DNASU:2615502 GeneID:2615502
KEGG:vch:VC2674 PATRIC:20084366 Uniprot:Q9KNQ7
Length = 443
Score = 134 (52.2 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 31/86 (36%), Positives = 49/86 (56%)
Query: 129 MIPEFVGRFPILVPFHSLNQELLVRILTEPKNAMIQQYQILFTMDKVDLTFSPEALQAIA 188
+IPE GR PI V +L+ RILTEPK ++ +QY L ++VD+ F+ + ++ IA
Sbjct: 318 LIPELQGRLPIRVELEALSSNDFKRILTEPKASLTEQYVALMKTEQVDVQFTEDGIKQIA 377
Query: 189 RLALE-----KKTGARGLRAIMESLL 209
A + + GAR L ++E L+
Sbjct: 378 DAAWQVNETTENIGARRLHTVLERLM 403
Score = 46 (21.3 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 9 PDVETLVHMWKLLCMLEGTIVNVPEKNSPRKLRGEMVQVDTTNILFVASGAY 60
PDV LL ++EG+ V+ K+ MV+ D +ILF+ASGA+
Sbjct: 270 PDVSREGVQRDLLPLIEGSTVST--KHG-------MVRTD--HILFIASGAF 310
>TIGR_CMR|VC_2674 [details] [associations]
symbol:VC_2674 "protease HslVU, ATPase subunit HslU"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006508
"proteolysis" evidence=ISS] [GO:0008233 "peptidase activity"
evidence=ISS] HAMAP:MF_00249 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR004491 InterPro:IPR013093 Pfam:PF00004 Pfam:PF07724
SMART:SM00382 GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0006200 GO:GO:0006508 GO:GO:0016887 GO:GO:0008233
InterPro:IPR019489 Pfam:PF10431 SMART:SM01086 eggNOG:COG1220
KO:K03667 OMA:KYGMIKT ProtClustDB:PRK05201 GO:GO:0009376
GO:GO:0070011 PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390 PIR:E82046
RefSeq:NP_232302.1 ProteinModelPortal:Q9KNQ7 SMR:Q9KNQ7
DNASU:2615502 GeneID:2615502 KEGG:vch:VC2674 PATRIC:20084366
Uniprot:Q9KNQ7
Length = 443
Score = 134 (52.2 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 31/86 (36%), Positives = 49/86 (56%)
Query: 129 MIPEFVGRFPILVPFHSLNQELLVRILTEPKNAMIQQYQILFTMDKVDLTFSPEALQAIA 188
+IPE GR PI V +L+ RILTEPK ++ +QY L ++VD+ F+ + ++ IA
Sbjct: 318 LIPELQGRLPIRVELEALSSNDFKRILTEPKASLTEQYVALMKTEQVDVQFTEDGIKQIA 377
Query: 189 RLALE-----KKTGARGLRAIMESLL 209
A + + GAR L ++E L+
Sbjct: 378 DAAWQVNETTENIGARRLHTVLERLM 403
Score = 46 (21.3 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 9 PDVETLVHMWKLLCMLEGTIVNVPEKNSPRKLRGEMVQVDTTNILFVASGAY 60
PDV LL ++EG+ V+ K+ MV+ D +ILF+ASGA+
Sbjct: 270 PDVSREGVQRDLLPLIEGSTVST--KHG-------MVRTD--HILFIASGAF 310
>WB|WBGene00007233 [details] [associations]
symbol:C01G10.6 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] EMBL:Z81030
GeneTree:ENSGT00390000011884 PIR:T18817 RefSeq:NP_506717.1
ProteinModelPortal:Q93166 EnsemblMetazoa:C01G10.6 GeneID:182083
KEGG:cel:CELE_C01G10.6 UCSC:C01G10.6 CTD:182083 WormBase:C01G10.6
OMA:QAQAYYL NextBio:916316 Uniprot:Q93166
Length = 89
Score = 113 (44.8 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 30/76 (39%), Positives = 35/76 (46%)
Query: 341 YIWYRYP--NTGY-IWYRYPNTGYLWTSYPNTGYLWYRYPN-----TGCIWYRYPKTGYL 392
Y++Y YP N GY +Y YPN N G Y Y N TG +Y YP GY
Sbjct: 21 YLYYYYPTNNNGYQTYYYYPNNNN------NNGQNTYYYDNGNNGNTGTTYYYYPNNGYT 74
Query: 393 WYRYPNTGYLWYRYSR 408
+Y YP Y Y Y R
Sbjct: 75 YYTYPYNYY--YTYGR 88
Score = 111 (44.1 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 28/66 (42%), Positives = 33/66 (50%)
Query: 321 YLFYRYP--NTGY-LWYRYPNT----GYIWYRYPN-----TGYIWYRYPNTGYLWTSYPN 368
YL+Y YP N GY +Y YPN G Y Y N TG +Y YPN GY + +YP
Sbjct: 21 YLYYYYPTNNNGYQTYYYYPNNNNNNGQNTYYYDNGNNGNTGTTYYYYPNNGYTYYTYPY 80
Query: 369 TGYLWY 374
Y Y
Sbjct: 81 NYYYTY 86
>UNIPROTKB|P0A6H5 [details] [associations]
symbol:hslU species:83333 "Escherichia coli K-12"
[GO:0009408 "response to heat" evidence=IEP] [GO:0070011 "peptidase
activity, acting on L-amino acid peptides" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009376 "HslUV
protease complex" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IPI] [GO:0006200 "ATP catabolic process"
evidence=IEA] [GO:0016020 "membrane" evidence=IDA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] HAMAP:MF_00249 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR004491 InterPro:IPR013093
Pfam:PF00004 Pfam:PF07724 SMART:SM00382 GO:GO:0005524 GO:GO:0016020
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006200 GO:GO:0016887 GO:GO:0009408
EMBL:L19201 InterPro:IPR019489 Pfam:PF10431 SMART:SM01086
eggNOG:COG1220 HOGENOM:HOG000010036 KO:K03667 OMA:KYGMIKT
ProtClustDB:PRK05201 GO:GO:0009376 GO:GO:0070011
PANTHER:PTHR11262:SF3 TIGRFAMs:TIGR00390 PIR:JT0761
RefSeq:NP_418366.1 RefSeq:YP_491520.1 PDB:1DO0 PDB:1DO2 PDB:1E94
PDB:1G4A PDB:1G4B PDB:1HQY PDB:1HT1 PDB:1HT2 PDB:1YYF PDBsum:1DO0
PDBsum:1DO2 PDBsum:1E94 PDBsum:1G4A PDBsum:1G4B PDBsum:1HQY
PDBsum:1HT1 PDBsum:1HT2 PDBsum:1YYF ProteinModelPortal:P0A6H5
SMR:P0A6H5 DIP:DIP-31855N IntAct:P0A6H5 SWISS-2DPAGE:P0A6H5
PaxDb:P0A6H5 PRIDE:P0A6H5 EnsemblBacteria:EBESCT00000003987
EnsemblBacteria:EBESCT00000018172 GeneID:12932793 GeneID:948430
KEGG:ecj:Y75_p3256 KEGG:eco:b3931 PATRIC:32123377 EchoBASE:EB1827
EcoGene:EG11881 BioCyc:EcoCyc:EG11881-MONOMER
BioCyc:ECOL316407:JW3902-MONOMER EvolutionaryTrace:P0A6H5
Genevestigator:P0A6H5 Uniprot:P0A6H5
Length = 443
Score = 131 (51.2 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 35/106 (33%), Positives = 55/106 (51%)
Query: 129 MIPEFVGRFPILVPFHSLNQELLVRILTEPKNAMIQQYQILFTMDKVDLTFSPEALQAIA 188
+IPE GR PI V +L RILTEP ++ QY+ L + V++ F+ ++ IA
Sbjct: 318 LIPELQGRLPIRVELQALTTSDFERILTEPNASITVQYKALMATEGVNIEFTDSGIKRIA 377
Query: 189 RLALE-----KKTGARGLRAIMESLLLDSMYEVPGSDILMVHITED 229
A + + GAR L ++E L+ + Y+ SD+ +IT D
Sbjct: 378 EAAWQVNESTENIGARRLHTVLERLMEEISYDA--SDLSGQNITID 421
Score = 46 (21.3 bits), Expect = 6.2e-06, Sum P(2) = 6.2e-06
Identities = 9/14 (64%), Positives = 12/14 (85%)
Query: 47 VDTTNILFVASGAY 60
V T +ILF+ASGA+
Sbjct: 297 VKTDHILFIASGAF 310
>WB|WBGene00007240 [details] [associations]
symbol:C01G10.15 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] EMBL:Z81030
GeneTree:ENSGT00390000011884 RefSeq:NP_001021355.1
UniGene:Cel.37086 ProteinModelPortal:Q7YX84
EnsemblMetazoa:C01G10.15 GeneID:3565227 KEGG:cel:CELE_C01G10.15
UCSC:C01G10.15 CTD:3565227 WormBase:C01G10.15 OMA:TNAYYLY
NextBio:955673 Uniprot:Q7YX84
Length = 100
Score = 105 (42.0 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 32/95 (33%), Positives = 42/95 (44%)
Query: 317 VSTSYLFYRYPNTGYLWYRYPNTGYIWYRYPNTGYI-WYRYPNTGYLWTSYPNTGYLWYR 375
++T + + N YL+Y YPN GY N GY +Y YPN + N G +Y
Sbjct: 7 IATLLVLFSTANAYYLYYYYPNNGY--NNNNNNGYTTYYYYPNNN----NNNNNGQTYYY 60
Query: 376 YPNTG----CIWYRYPKTGYLWYRYPNT--GYLWY 404
Y N G C GY +Y YP+ GY Y
Sbjct: 61 YDNNGYNNGCSGCSN-NNGYTYY-YPSNSNGYTTY 93
>WB|WBGene00007232 [details] [associations]
symbol:C01G10.5 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] EMBL:Z81030
GeneTree:ENSGT00390000011884 RefSeq:NP_506718.2 UniGene:Cel.36505
EnsemblMetazoa:C01G10.5 GeneID:182082 KEGG:cel:CELE_C01G10.5
UCSC:C01G10.5 CTD:182082 WormBase:C01G10.5 OMA:PSNGYNY
NextBio:916312 Uniprot:Q93165
Length = 75
Score = 94 (38.1 bits), Expect = 0.00068, P = 0.00068
Identities = 24/60 (40%), Positives = 26/60 (43%)
Query: 318 STSYLFYRYPNTGYLWYRYPNTGYI-WYRYPNTGYIWYRYPNTGYLWTSYPNTGYLWYRY 376
S Y +Y YPN Y Y N GY +Y YPN Y Y N Y N GY Y Y
Sbjct: 18 SAYYTYYYYPNNNNNGYNY-NNGYTTYYYYPNNNNNGYYYDN------GYNNNGYTTYYY 70
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.139 0.429 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 408 408 0.00079 118 3 11 22 0.38 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 51
No. of states in DFA: 597 (63 KB)
Total size of DFA: 253 KB (2131 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 32.44u 0.14s 32.58t Elapsed: 00:00:02
Total cpu time: 32.45u 0.14s 32.59t Elapsed: 00:00:02
Start: Thu Aug 15 14:49:24 2013 End: Thu Aug 15 14:49:26 2013