BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11095
(102 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O15943|CADN_DROME Neural-cadherin OS=Drosophila melanogaster GN=CadN PE=1 SV=2
Length = 3097
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 83/88 (94%), Positives = 88/88 (100%)
Query: 12 TWADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQET 71
TWADIKVNHPLDYE+IKEYNLTIRVENNGAQQLASEATV+I+LEDVNDEIPLFTEREQET
Sbjct: 1247 TWADIKVNHPLDYESIKEYNLTIRVENNGAQQLASEATVYIMLEDVNDEIPLFTEREQET 1306
Query: 72 VLEGEPIGSKVTQVNAIDKDGTFPNNQL 99
VLEGEPIG+KVTQVNAIDKDGTFPNNQ+
Sbjct: 1307 VLEGEPIGTKVTQVNAIDKDGTFPNNQV 1334
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLF---TEREQETV 72
I V LDYET + Y L + +N + TV I ++DVND P+F T R Q T
Sbjct: 1469 IYVAGALDYETRRRYELRLAASDNLKENY---TTVIIHVKDVNDNPPVFERPTYRTQITE 1525
Query: 73 LEGEPIGSKVTQVNAIDKDGTFPNN 97
+ + +V QV A D D P N
Sbjct: 1526 EDDRNLPKRVLQVTATDGDKDRPQN 1550
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 14 ADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVL 73
+ + LD E + + + I ++G+ + AT+ +I++D+ND P F + + +
Sbjct: 1916 GSVTIQRSLDREVVPRHQVKILAIDDGSPPKTATATLTVIVQDINDNAPKFLKDYRPVLP 1975
Query: 74 EGEPIGSKVTQVNAIDKD 91
E P KV ++ A D D
Sbjct: 1976 EHVPP-RKVVEILATDDD 1992
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 9/72 (12%)
Query: 29 EYNLTIRVENNGAQQLASEATVH-------IILEDVNDEIPLFTEREQ--ETVLEGEPIG 79
+Y L + ++G+ + + T+H + + DVND P+F + V EG P G
Sbjct: 926 KYELNVTAMDDGSCCVNGDQTIHTSTAVVVVFITDVNDNKPVFKDCSTYYPKVEEGAPNG 985
Query: 80 SKVTQVNAIDKD 91
S V +V A D+D
Sbjct: 986 SPVIKVVATDED 997
Score = 32.7 bits (73), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 8/82 (9%)
Query: 16 IKVNHPLDYETIKE---YNLTIRV-ENNGAQQLASEATVHIILEDVNDEIPLF--TEREQ 69
+K+ LD+E +++ Y+L + E++G + + T+ + DVND P F + +
Sbjct: 706 VKLAKELDFEDLRQPHVYSLIVTATEDSGGFSTSVDLTIRVT--DVNDNAPKFELPDYQA 763
Query: 70 ETVLEGEPIGSKVTQVNAIDKD 91
V E P+G+ + +V A+D D
Sbjct: 764 HNVDEDIPLGTSILRVKAMDSD 785
Score = 32.3 bits (72), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 31 NLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQ-ETVLEGEPIGSKVTQVNAID 89
++T++ + G L + + + DVND PLF ++ E V + IG+ + +V+A D
Sbjct: 1045 SVTVKATDQGDPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDASIGTNILRVSASD 1104
Query: 90 KDG 92
+D
Sbjct: 1105 EDA 1107
Score = 32.3 bits (72), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 39/84 (46%), Gaps = 4/84 (4%)
Query: 12 TWADIKVNHPLDYETI---KEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTERE 68
T +I V PLD + ++ T+ ++ G + L A V + L+D+ND P+F +
Sbjct: 1575 TTGEIFVLKPLDRDQPNGRPQWRFTVFAQDEGGEGLVGYADVQVNLKDINDNAPIFPQGV 1634
Query: 69 Q-ETVLEGEPIGSKVTQVNAIDKD 91
V E G V + A+D D
Sbjct: 1635 YFGNVTENGTAGMVVMTMTAVDYD 1658
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 24/38 (63%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVND 59
D E KEY + I ++++G+ + +T+ +I+ DVND
Sbjct: 2041 FDREQQKEYMIPIVIKDHGSPAMTGTSTLTVIIGDVND 2078
>sp|Q24298|CADE_DROME DE-cadherin OS=Drosophila melanogaster GN=shg PE=1 SV=2
Length = 1507
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 6/91 (6%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVLEG 75
I + LDYE I +Y LT+ V N +L +E + I +EDVND IP +TE + T+LE
Sbjct: 366 ISLGKTLDYEAITDYTLTMIVRN--THELGTEHQIKIQVEDVNDNIPYYTEVKSGTILEN 423
Query: 76 EPIGSKVTQVNAIDKDGTFPNN----QLLDN 102
EP G+ V QV A D DGT NN +L DN
Sbjct: 424 EPPGTPVMQVRAFDMDGTSANNIVSFELADN 454
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVLEG 75
I VN LDYETI EY L +R + TV I +EDVND P+F + T+LE
Sbjct: 578 ITVNQKLDYETITEYELKVRAFDGIYDDYT---TVVIKIEDVNDNPPVFKQDYSVTILEE 634
Query: 76 EPIGSKVTQVNAIDKD 91
+ V A D D
Sbjct: 635 TTYDDCILTVEAYDPD 650
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 27/44 (61%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVND 59
+ N D E KEY + IR+ ++G + ++ + +H+++ DVND
Sbjct: 790 LHANVQFDREAQKEYFIPIRISDSGVPRQSAVSILHLVIGDVND 833
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 32 LTIRVENNGAQQLASEATVHIILEDVNDEIPLFTE-REQETVLEGEPIGSKVTQVNAIDK 90
+T++ +NG L T ++ +ED+ND P F + R E++ E + V ++A D
Sbjct: 163 VTVQATDNGLPPLDDVCTFNVTIEDINDNAPAFNKARYDESMSENAQPDAVVMTISASDF 222
Query: 91 DGTFPNNQLLD 101
D NN L++
Sbjct: 223 DDG--NNSLVE 231
>sp|P33450|FAT_DROME Cadherin-related tumor suppressor OS=Drosophila melanogaster GN=ft
PE=1 SV=3
Length = 5147
Score = 62.0 bits (149), Expect = 9e-10, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 52/86 (60%), Gaps = 3/86 (3%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVL-E 74
I + LDY+ I+EY+L I V++ G L+S A + IIL DVND P+F +E + E
Sbjct: 3286 IVIQQQLDYDLIQEYHLNITVQDLGYHPLSSVAMLTIILTDVNDNPPVFNHKEYHCYIPE 3345
Query: 75 GEPIGSKVTQVNAIDKDGTFPNNQLL 100
+P+G+ V Q +A DKD P N ++
Sbjct: 3346 NKPVGTFVFQAHAADKDS--PKNAII 3369
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVL-E 74
++VN LD E I +YNLT+ + G + A + I + DVND P+F + E VL E
Sbjct: 446 VRVNGVLDREEIGKYNLTVVAMDQGTPARTTTAHLIIDVNDVNDHEPVFEKSEYSAVLSE 505
Query: 75 GEPIGSKVTQVNAIDKD 91
P GS V + A D+D
Sbjct: 506 LAPTGSFVASITATDED 522
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQET-VLEGEPIGS 80
LDYE ++ Y L ++ ++NG L++ TV+ + D+ND P+F + V E PI +
Sbjct: 1985 LDYEEVQHYILIVQAQDNGQPSLSTTITVYCNVLDLNDNAPIFDPMSYSSEVFENVPIAT 2044
Query: 81 KVTQVNAIDKDGTFPNNQLLD 101
+V V+A D D NN L++
Sbjct: 2045 EVVTVSAKDIDSG--NNGLIE 2063
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/86 (38%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQL--ASEATVHIILEDVNDEIPLFTEREQETVL 73
I V LD ET LT+ +N G+ + EA V I ++D ND T+
Sbjct: 3496 IYVARHLDRETQNRVVLTVMAKNYGSIRGNDTDEAQVIISIQDGNDPPEFIKHYYTSTIS 3555
Query: 74 EGEPIGSKVTQVNAIDKDGTFPNNQL 99
E P+G+KVT V AIDKD NNQ
Sbjct: 3556 EAAPVGTKVTTVKAIDKDVRTQNNQF 3581
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/85 (38%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Query: 14 ADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFT-EREQETV 72
+I LD E YNL I + G ATVHI LEDVND P FT E +
Sbjct: 3601 GEISTASRLDREETSTYNLVIGAIDTGLPPQTGSATVHIELEDVNDNGPTFTPEGLNGYI 3660
Query: 73 LEGEPIGSKVTQVNAIDKDGTFPNN 97
E EP G+ + + A D D P N
Sbjct: 3661 SENEPAGTSIMTLIASDPD--LPRN 3683
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 14 ADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFT-EREQETV 72
DI + PLD E EY LT+ + G+ L V + ++D+ND P+F + TV
Sbjct: 2441 GDIALLKPLDREQQSEYTLTLVAMDTGSPPLTGTGIVRVEVQDINDNDPVFELQSYHATV 2500
Query: 73 LEGEPIGSKVTQVNAIDKD 91
E P G+ V A DKD
Sbjct: 2501 RENLPSGTHVLTPRATDKD 2519
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 22 LDYETIKEYNLTIR--VENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVLEGEPIG 79
L Y + ++Y T + + + Q+L+S V I+++DVNDE+P+F + ++E I
Sbjct: 2123 LKYRSPRKYQQTRQEFLAHQKQQRLSSTVKVTILIKDVNDEVPVFISANETAIMENVAIN 2182
Query: 80 SKVTQVNAIDKD 91
+ V V A+D D
Sbjct: 2183 TVVIAVKAVDND 2194
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 18 VNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTERE-QETVLEGE 76
++ PLDYE I Y L I + G L++ ++++ D ND P+F + EG
Sbjct: 1443 LHKPLDYEDITSYTLNITASDCGTPSLSTTVLYNVLVVDDNDNPPIFPSTAIVRQIKEGI 1502
Query: 77 PIGSKVTQVNAIDKD 91
P+ + + V A D D
Sbjct: 1503 PLKTPIVTVTADDPD 1517
Score = 39.3 bits (90), Expect = 0.008, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 21 PLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVL-EGEPIG 79
PLD E L+I + G + + +I+ D NDE P F++REQ L E P
Sbjct: 556 PLDREIRDTVELSISARDGGPNPKFAYTQLKVIILDENDEAPQFSQREQNVTLGEDAPPQ 615
Query: 80 SKVTQVNAIDKD 91
+ V + A D D
Sbjct: 616 TIVALMTATDHD 627
Score = 39.3 bits (90), Expect = 0.008, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 8/90 (8%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLA---SEATVHIILEDVNDEIPLFTEREQ-ET 71
++V L+YE + Y+LT+R E+ + A +E T++I+ D+ND P F +
Sbjct: 2335 VRVAKNLNYERLSRYSLTVRAEDCALENPAGDTAELTINIL--DINDNRPTFLDSPYLAR 2392
Query: 72 VLEGE--PIGSKVTQVNAIDKDGTFPNNQL 99
V+E P G V VNA D D N+Q+
Sbjct: 2393 VMENTVPPNGGYVLTVNAYDADTPPLNSQV 2422
Score = 38.9 bits (89), Expect = 0.009, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVL-E 74
I + P+ Y L +R + G + E V I++ N + P F+ + ++ E
Sbjct: 3181 ITLVKPIQVPPNTRYELVVRATDRGVPPQSDETRVVIVVTGENMDTPRFSVNSYQVIVPE 3240
Query: 75 GEPIGSKVTQVNAIDKDGTFPNNQL 99
EP+GS + V A D D T PN L
Sbjct: 3241 NEPVGSTILTVGATDDD-TGPNGML 3264
Score = 38.5 bits (88), Expect = 0.012, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 22 LDYETIKEYNLTIRVENNGAQQ-LASEATVHIILEDVNDEIPLFTEREQE-TVLEGEPIG 79
LD E+ + ++L + ++ + L+S A++ I++ D ND P FT+ E +VLE P G
Sbjct: 1341 LDRESQEIHHLIVVAKDAALKHPLSSNASITIVVLDENDNAPEFTQSSSEVSVLETSPTG 1400
Query: 80 SKVTQVNAIDKD 91
+++ + A D D
Sbjct: 1401 TELMRFRASDAD 1412
Score = 38.1 bits (87), Expect = 0.016, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 32/70 (45%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVLEGEPIGSK 81
LD E I +Y + + G + A+V + L D ND P FT V E IGS
Sbjct: 2871 LDREEIGDYAFVVEAVDQGVPHMTGTASVLLHLLDKNDNPPKFTRLFSLNVTENAEIGSF 2930
Query: 82 VTQVNAIDKD 91
V +V + D D
Sbjct: 2931 VIRVTSSDLD 2940
Score = 38.1 bits (87), Expect = 0.016, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Query: 12 TWADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTERE-QE 70
T ++V LD E Y L I + G ++E+ + I + D ND P+F ++
Sbjct: 2226 TDGQLRVVDALDRELRSSYLLNITARDRGEPPQSTESQLLIRILDENDNSPVFDPKQYSA 2285
Query: 71 TVLEGEPIGSKVTQVNAIDKD 91
+V E IG+ V QV+A D D
Sbjct: 2286 SVAENASIGAMVLQVSATDVD 2306
Score = 35.8 bits (81), Expect = 0.086, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
Query: 18 VNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE-TVLEGE 76
+N LD ET +Y L IRV ++G Q + AT+ + D ND PLF + + E
Sbjct: 1879 LNDTLDRETKSKYELRIRV-SDGVQYTEAYATIQV--SDTNDNPPLFEDTVYSFDIPENA 1935
Query: 77 PIGSKVTQVNAIDKD 91
G +V Q+ A D D
Sbjct: 1936 QRGYQVGQIVARDAD 1950
Score = 35.0 bits (79), Expect = 0.14, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 11/81 (13%)
Query: 22 LDYETIKEYNLTIRVENNGAQ----QLASEATVHIILEDVNDEIPLFTEREQETVLEGEP 77
+D E+I + LT+ V + AQ QL++E V +I+ED+ND P+F +L +
Sbjct: 1556 IDRESIDTFRLTV-VATDRAQPSERQLSTEKLVTVIVEDINDNAPVFVSM-NAAILPPKF 1613
Query: 78 IGSK-----VTQVNAIDKDGT 93
SK V QV+A D D +
Sbjct: 1614 STSKGSSTAVMQVHAKDADSS 1634
Score = 34.7 bits (78), Expect = 0.18, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Query: 18 VNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTERE-QETVLEGE 76
V PLD E Y LT+ + G +S V I + D ND P FT ++ E
Sbjct: 1107 VRAPLDREERDYYALTVSCRDAGQPSRSSVVPVVIHVIDENDNAPQFTNSTFTFSIPENA 1166
Query: 77 PIGSKVTQVNAIDKD 91
P + V ++ A+D+D
Sbjct: 1167 PADTFVGKLTAVDRD 1181
Score = 33.9 bits (76), Expect = 0.27, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 32 LTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE-TVLEGEPIGSKVTQVNAIDK 90
L V +NG +L + V +I+ DVND P F T+ EG G+ +T V D
Sbjct: 1246 LEATVSDNGIPRLQDKVKVKVIVTDVNDNAPEFLRAPYHVTISEGASEGTHITHVFTQDA 1305
Query: 91 D 91
D
Sbjct: 1306 D 1306
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 9/75 (12%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTERE-----QETVLEGE 76
LD E+ Y L I + G+ V++ + DVND P+F + ET L G
Sbjct: 228 LDRESRGSYQLNISARDGGSPPRFGYLQVNVTILDVNDNPPIFDHSDYNVSLNETALPGT 287
Query: 77 PIGSKVTQVNAIDKD 91
P V V A D D
Sbjct: 288 P----VVTVMASDND 298
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 30 YNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVLEGEPI-GSKVTQVNAI 88
Y LT+ +NG L SE V+I + D ++ P F + E L + + G ++ +V+A
Sbjct: 3090 YALTVLATDNGKPPLYSECLVNINIVDAHNNPPKFEQAEYLAPLPQDAVRGQRIVRVHAN 3149
Query: 89 DK 90
DK
Sbjct: 3150 DK 3151
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASE-ATVHIILEDVNDEIPLFTER 67
+ PLD E + +Y +++ + GA S ATV + + DVND P F R
Sbjct: 659 LTTRRPLDREKMSQYEISVIARDQGAPTPQSATATVWLNVADVNDNDPQFYPR 711
>sp|Q9HCU4|CELR2_HUMAN Cadherin EGF LAG seven-pass G-type receptor 2 OS=Homo sapiens
GN=CELSR2 PE=1 SV=1
Length = 2923
Score = 60.1 bits (144), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/79 (41%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLAS-EATVHIILEDVNDEIPLFTERE-QETVL 73
+ V PLDYET KEY L +R ++ G L++ V + + D+ND P+F Q TVL
Sbjct: 456 LDVVSPLDYETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVL 515
Query: 74 EGEPIGSKVTQVNAIDKDG 92
E P+G V V AID D
Sbjct: 516 ESVPLGYLVLHVQAIDADA 534
Score = 49.3 bits (116), Expect = 8e-06, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVL-E 74
I V LD E + Y+ + ++G L + A+V + + DVND P FT+ E L E
Sbjct: 562 ISVAAELDREEVDFYSFGVEARDHGTPALTASASVSVTVLDVNDNNPTFTQPEYTVRLNE 621
Query: 75 GEPIGSKVTQVNAIDKDG 92
+G+ V V+A+D+D
Sbjct: 622 DAAVGTSVVTVSAVDRDA 639
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLF-TEREQETVLEGEPIGS 80
LDYE Y L I +NG Q + + I++ DVND P F + Q +V E P +
Sbjct: 773 LDYEDQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFT 832
Query: 81 KVTQVNAIDKD 91
V Q++A D+D
Sbjct: 833 SVLQISATDRD 843
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTERE-QETVLEGEPIGS 80
LD ET + + +++G + ++ AT+ I++ D ND P+F ++E +E++ E +G
Sbjct: 247 LDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLEVGY 306
Query: 81 KVTQVNAIDKDGTFPNNQLL 100
+V V A D D PN +L
Sbjct: 307 EVLTVRATDGDAP-PNANIL 325
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 11/83 (13%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQ--QLASEATVHIILEDVNDEIPLFTERE----- 68
I+ P+D E ++ Y LT+ + G ++ A V + +ED ND P F+E+
Sbjct: 349 IRTRGPVDREEVESYQLTVEASDQGRDPGPRSTTAAVFLSVEDDNDNAPQFSEKRYVVQV 408
Query: 69 QETVLEGEPIGSKVTQVNAIDKD 91
+E V G P V +V A D+D
Sbjct: 409 REDVTPGAP----VLRVTASDRD 427
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQET-VLEGEPIGS 80
LD E + +Y L + G + V + + DVND P+F + E + V E PIG
Sbjct: 879 LDRENVAQYVLRAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGL 938
Query: 81 KVTQVNAIDKD-GTFPNNQLL 100
V +V A D D GT N Q++
Sbjct: 939 AVARVTATDPDEGT--NAQIM 957
Score = 32.7 bits (73), Expect = 0.67, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTERE 68
LDYE EY L I+ + L S ATVH+ L D ND P+ E
Sbjct: 984 LDYEDRPEYVLVIQAT---SAPLVSRATVHVRLLDRNDNPPVLGNFE 1027
>sp|Q9V5N8|STAN_DROME Protocadherin-like wing polarity protein stan OS=Drosophila
melanogaster GN=stan PE=1 SV=4
Length = 3579
Score = 59.3 bits (142), Expect = 6e-09, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 14 ADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLF-TEREQETV 72
D+ + PLDYE+++ Y L IR ++ G+ ++ + + + D ND P F T + QE+V
Sbjct: 639 GDVSLVKPLDYESVRSYRLVIRAQDGGSPSRSNTTQLLVNVIDANDNAPRFYTSQFQESV 698
Query: 73 LEGEPIGSKVTQVNAIDKD 91
LE P+G + +V A D D
Sbjct: 699 LENVPVGYNIIRVQAYDSD 717
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/77 (38%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLF-TEREQETVLE 74
I N PLD ET Y LT+ ++ G L+ V I + DVND P F + Q ++LE
Sbjct: 959 IVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEIGVTDVNDNAPAFKSPLYQASILE 1018
Query: 75 GEPIGSKVTQVNAIDKD 91
+G+ V QV A D D
Sbjct: 1019 DALVGTSVIQVAASDPD 1035
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 12 TWADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLF-TEREQE 70
T I+ N LD E++ ++LT + G+ L+S V I LEDVND P F +++
Sbjct: 1061 TSGTIRTNKGLDRESVAVFHLTAIAVDKGSPPLSSTVEVQIRLEDVNDSPPTFASDKITL 1120
Query: 71 TVLEGEPIGSKVTQVNAIDKD 91
V E P+GS V +++A D D
Sbjct: 1121 YVPENSPVGSVVGEIHAHDPD 1141
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTERE-QETVLE 74
I + LDY+ K + LT+ ++G + + ATVHI + D N+ P+F +V E
Sbjct: 851 ITIAQSLDYKQEKRFLLTVAATDSGGR--SDTATVHINITDANNFAPIFENAPYSASVFE 908
Query: 75 GEPIGSKVTQVNAIDKD 91
P+G+ V V+A D D
Sbjct: 909 DAPVGTTVLVVSATDSD 925
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 21 PLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE-TVLEGEPIG 79
PLD E + + ++ G ++ ++V I ++DVND P F + E V E +P G
Sbjct: 751 PLDREEQGRFAFQVVAKDGGVPPKSASSSVVITVQDVNDNDPAFNPKYYEANVGEDQPPG 810
Query: 80 SKVTQVNAIDKD 91
+ VT V A D D
Sbjct: 811 TPVTTVTATDPD 822
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLF-TEREQETVLEGEPIGS 80
LD E + + + ++ + T+ + + D ND P F E+ + ++ EG +GS
Sbjct: 422 LDRELMDVHYFRVVATDDSFPPRSGTTTLQVNVLDCNDHSPTFEAEQFEASIREGATVGS 481
Query: 81 KVTQVNAIDKD 91
V + A D+D
Sbjct: 482 TVITLRATDQD 492
>sp|Q9NYQ7|CELR3_HUMAN Cadherin EGF LAG seven-pass G-type receptor 3 OS=Homo sapiens
GN=CELSR3 PE=1 SV=2
Length = 3312
Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 6/82 (7%)
Query: 14 ADIKVNHPLDYETIKEYNLTIRVENNGAQQLASE---ATVHIILEDVNDEIPLFTERE-Q 69
+I+V PLD+E +EY L IR ++ G L++ A++ ++ D+ND IP+F Q
Sbjct: 600 GEIQVVAPLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVV--DINDHIPIFVSTPFQ 657
Query: 70 ETVLEGEPIGSKVTQVNAIDKD 91
+VLE P+G V + A+D D
Sbjct: 658 VSVLENAPLGHSVIHIQAVDAD 679
Score = 53.9 bits (128), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVL-E 74
+ V+ PLD E+++ Y + ++G+ L++ A+V + + DVND P FT +E L E
Sbjct: 708 VSVSGPLDRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNE 767
Query: 75 GEPIGSKVTQVNAIDKDG 92
+G+ V V A+D+D
Sbjct: 768 DAAVGTSVVSVTAVDRDA 785
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE-TVLE 74
I + PLDYE Y L I +NG Q A V +++ DVND P F V E
Sbjct: 913 ITLQAPLDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSE 972
Query: 75 GEPIGSKVTQVNAIDKDG 92
P + V Q++A D+D
Sbjct: 973 DAPPFTSVLQISATDRDA 990
Score = 50.1 bits (118), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQET-VLEGEPIGS 80
LD E + Y LT + G L + ++ ++++DVND P+F E E V E +GS
Sbjct: 1025 LDREAVSVYELTAYAVDRGVPPLRTPVSIQVMVQDVNDNAPVFPAEEFEVRVKENSIVGS 1084
Query: 81 KVTQVNAIDKDGTFPNNQLL 100
V Q+ A+D D PN ++
Sbjct: 1085 VVAQITAVDPDEG-PNAHIM 1103
Score = 42.7 bits (99), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTERE-QETVLE 74
I+ LD E+++ + L + +++G+ +L++ V + + D ND P+F + + +ET+ E
Sbjct: 385 IRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHSPVFEQAQYRETLRE 444
Query: 75 GEPIGSKVTQVNAIDKDGTFPNNQL 99
G + Q+ A D D PN L
Sbjct: 445 NVEEGYPILQLRATDGDAP-PNANL 468
Score = 34.7 bits (78), Expect = 0.19, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATV--HIILEDVNDEIPLFTE-REQETV 72
I + +D E ++ Y L + + G + ATV HI + D ND P F+E R V
Sbjct: 495 ISTSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQV 554
Query: 73 LEGEPIGSKVTQVNAIDKD 91
E + V +V A D+D
Sbjct: 555 REDVRPHTVVLRVTATDRD 573
Score = 32.7 bits (73), Expect = 0.61, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLF 64
LDYE +EY + ++ + L S ATVH+ L D ND P+
Sbjct: 1130 LDYEARQEYVIVVQAT---SAPLVSRATVHVRLVDQNDNSPVL 1169
>sp|O35161|CELR1_MOUSE Cadherin EGF LAG seven-pass G-type receptor 1 OS=Mus musculus
GN=Celsr1 PE=2 SV=3
Length = 3034
Score = 57.8 bits (138), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/93 (36%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Query: 2 NLNFLCYLLFTWADIKVNHPLDYETIKEYNLTIRVENNGAQQLA-SEATVHIILEDVNDE 60
NL YL + V +PLD+E I+EY L I+ ++ G L S V + + DVND
Sbjct: 517 NLKGQFYLHSLSGSLDVINPLDFEAIREYTLRIKAQDGGRPPLINSSGLVSVQVLDVNDN 576
Query: 61 IPLFTERE-QETVLEGEPIGSKVTQVNAIDKDG 92
P+F Q VLE P+G V + A+D D
Sbjct: 577 APIFVSSPFQAAVLENVPLGHSVLHIQAVDADA 609
Score = 53.1 bits (126), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLF-TEREQETVLEGEPIGS 80
LDYE Y L I ++NG Q + ++ I++ D ND P F + Q +V E P +
Sbjct: 865 LDYEDQAAYTLAITAQDNGIPQKSDTTSLEILILDANDNAPRFLRDFYQGSVFEDAPPST 924
Query: 81 KVTQVNAIDKDGTFPNNQLL 100
V QV+A D+D + PN +LL
Sbjct: 925 SVLQVSATDRD-SGPNGRLL 943
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVL-E 74
I V LD E ++ Y+ + ++G+ ++S A+V I + DVND P+FT+ E L E
Sbjct: 654 ITVCAELDREEVEHYSFGVEAVDHGSPAMSSSASVSITVLDVNDNDPMFTQPVYELRLNE 713
Query: 75 GEPIGSKVTQVNAIDKDG 92
+GS V + A D+D
Sbjct: 714 DAAVGSSVLTLRARDRDA 731
Score = 46.2 bits (108), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 8 YLLFTWADIKVNHPLDYETIKEYNL-TIRVENNGAQQLASEATVHIILEDVNDEIPLFTE 66
Y+ T I+ LD E + YNL + V+ L++ + + + D+ND P+F +
Sbjct: 957 YIEPTSGVIRTQRRLDRENVAVYNLWALAVDRGSPNPLSASVGIQVSVLDINDNPPVFEK 1016
Query: 67 REQET-VLEGEPIGSKVTQVNAIDKDGTFPNNQLL 100
E E V E P+GS V ++ A D D PN Q++
Sbjct: 1017 DELELFVEENSPVGSVVARIRANDPDEG-PNAQIM 1050
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQ--LASEATVHIILEDVNDEIPLFTE-REQETV 72
++ +D E EY L + + G L++ ATVHI++ED ND P F+E R V
Sbjct: 424 VRTRAVVDREEAAEYQLLVEANDQGRNPGPLSASATVHIVVEDENDNYPQFSEKRYVVQV 483
Query: 73 LEGEPIGSKVTQVNAIDKD 91
E + + V +V A D+D
Sbjct: 484 PEDVAVNTAVLRVQATDRD 502
Score = 36.6 bits (83), Expect = 0.042, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTERE-QETVLEGEPIGS 80
LD ET + L + ++G+ + ++ + + + D ND P+F + E +E + E +G
Sbjct: 326 LDRETKDTHVLKVSAVDHGSPRRSAATYLTVTVSDTNDHSPVFEQSEYRERIRENLEVGY 385
Query: 81 KVTQVNAIDKDGTFPNN 97
+V + A D D P+N
Sbjct: 386 EVLTIRATDGDA--PSN 400
Score = 35.8 bits (81), Expect = 0.078, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 21 PLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE-TVLEGEPIG 79
PLDY+ ++Y L + ++G + + A V I + D N P+F +V E P+G
Sbjct: 764 PLDYKQERQYVLAV-TASDGTR--SHTAQVFINVTDANTHRPVFQSSHYTVSVSEDRPVG 820
Query: 80 SKVTQVNAIDKD 91
+ + ++A D+D
Sbjct: 821 TSIATISATDED 832
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Query: 14 ADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIP 62
D++ LD+E ++Y L ++ + L S ATVHI L D ND P
Sbjct: 1069 GDLRALVELDFEVRRDYMLVVQAT---SAPLVSRATVHIRLLDQNDNPP 1114
>sp|Q9NYQ6|CELR1_HUMAN Cadherin EGF LAG seven-pass G-type receptor 1 OS=Homo sapiens
GN=CELSR1 PE=1 SV=1
Length = 3014
Score = 55.8 bits (133), Expect = 7e-08, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLA-SEATVHIILEDVNDEIPLFTERE-QETVL 73
+ V +PLD+E +++Y+L+I+ ++ G L S V + + DVND P+F Q TVL
Sbjct: 516 LDVINPLDFEDVQKYSLSIKAQDGGRPPLINSSGVVSVQVLDVNDNEPIFVSSPFQATVL 575
Query: 74 EGEPIGSKVTQVNAIDKD 91
E P+G V + A+D D
Sbjct: 576 ENVPLGYPVVHIQAVDAD 593
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFT-EREQETVLEGEPIGS 80
LDYE Y LTI ++NG Q + T+ I++ D ND P F + Q ++ E P +
Sbjct: 850 LDYENQVAYTLTIMAQDNGIPQKSDTTTLEILILDANDNAPQFLWDFYQGSIFEDAPPST 909
Query: 81 KVTQVNAIDKDGTFPNNQLL 100
+ QV+A D+D + PN +LL
Sbjct: 910 SILQVSATDRD-SGPNGRLL 928
Score = 48.5 bits (114), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 8 YLLFTWADIKVNHPLDYETIKEYNL-TIRVENNGAQQLASEATVHIILEDVNDEIPLFTE 66
Y+ T I+ LD E + YNL + V+ L++ + + + D+ND P+F +
Sbjct: 942 YIEPTSGVIRTQRRLDRENVAVYNLWALAVDRGSPTPLSASVEIQVTILDINDNAPMFEK 1001
Query: 67 REQET-VLEGEPIGSKVTQVNAIDKDGTFPNNQLL 100
E E V E P+GS V ++ A D D PN Q++
Sbjct: 1002 DELELFVEENNPVGSVVAKIRANDPDEG-PNAQIM 1035
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 22 LDYETIKEYNLTIRVENNGAQQ--LASEATVHIILEDVNDEIPLFTEREQET-VLEGEPI 78
LD E EY L + + G L++ ATV+I +ED ND P F+E+ V E +
Sbjct: 415 LDREEAAEYQLLVEANDQGRNPGPLSATATVYIEVEDENDNYPQFSEQNYVVQVPEDVGL 474
Query: 79 GSKVTQVNAIDKD 91
+ V +V A D+D
Sbjct: 475 NTAVLRVQATDRD 487
Score = 37.4 bits (85), Expect = 0.030, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVL-E 74
I V LD E ++ Y+ + ++G+ ++S +V I + DVND P+FT+ E L E
Sbjct: 639 ITVCAELDREEVEHYSFGVEAVDHGSPPMSSSTSVSITVLDVNDNDPVFTQPTYELRLNE 698
Query: 75 GEPIGSKVTQVNAIDKDG 92
+GS V + A D+D
Sbjct: 699 DAAVGSSVLTLQARDRDA 716
Score = 36.2 bits (82), Expect = 0.057, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTERE-QETVLE 74
+ + LD ET + + L ++ + ++ + ++++D ND P+F + E +E V E
Sbjct: 305 VSTDSVLDRETKETHVLRVKAVDYSTPPRSATTYITVLVKDTNDHSPVFEQSEYRERVRE 364
Query: 75 GEPIGSKVTQVNAIDKDGTFPNN 97
+G +V + A D+D N
Sbjct: 365 NLEVGYEVLTIRASDRDSPINAN 387
Score = 36.2 bits (82), Expect = 0.057, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 14 ADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTE 66
D++ LD+E +EY L ++ + L S ATVHI+L D ND P+ +
Sbjct: 1054 GDLRAMVELDFEVRREYVLVVQAT---SAPLVSRATVHILLVDQNDNPPVLPD 1103
Score = 32.3 bits (72), Expect = 0.77, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 21 PLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE-TVLEGEPIG 79
PLDY+ ++Y L + ++G + + A V I + D N P+F +V E P+G
Sbjct: 749 PLDYKQEQQYVLAV-TASDGTR--SHTAHVLINVTDANTHRPVFQSSHYTVSVSEDRPVG 805
Query: 80 SKVTQVNAIDKD 91
+ + ++A D+D
Sbjct: 806 TSIATLSANDED 817
>sp|Q91ZI0|CELR3_MOUSE Cadherin EGF LAG seven-pass G-type receptor 3 OS=Mus musculus
GN=Celsr3 PE=2 SV=2
Length = 3301
Score = 55.8 bits (133), Expect = 8e-08, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 14 ADIKVNHPLDYETIKEYNLTIRVENNGAQQLASE---ATVHIILEDVNDEIPLFTERE-Q 69
+I+V PLD+E +EY L IR ++ G L++ A++ ++ D+ND P+F Q
Sbjct: 591 GEIQVMAPLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVV--DINDHAPIFVSTPFQ 648
Query: 70 ETVLEGEPIGSKVTQVNAIDKD 91
+VLE P+G V + A+D D
Sbjct: 649 VSVLENAPLGHSVIHIQAVDAD 670
Score = 53.9 bits (128), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVL-E 74
+ V+ PLD E+++ Y + ++G+ L++ A+V + + DVND P FT +E L E
Sbjct: 699 VSVSGPLDRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNE 758
Query: 75 GEPIGSKVTQVNAIDKDG 92
+G+ V V A+D+D
Sbjct: 759 DAAVGTSVVSVTAVDRDA 776
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE-TVLE 74
I + PLDYE Y L I +NG Q A V +++ DVND P F V E
Sbjct: 904 ITLQAPLDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSE 963
Query: 75 GEPIGSKVTQVNAIDKDG 92
P + V Q++A D+D
Sbjct: 964 DAPPFTSVLQISATDRDA 981
Score = 49.3 bits (116), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQET-VLEGEPIGS 80
LD E + Y LT + G L + ++ + ++DVND P+F E E V E +GS
Sbjct: 1016 LDREAVPVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGS 1075
Query: 81 KVTQVNAIDKDGTFPNNQLL 100
V Q+ A+D D PN ++
Sbjct: 1076 VVAQITAVDPDDG-PNAHIM 1094
Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTERE-QETVLE 74
I+ LD E+++ + L + +++G+ +L++ V + + D ND P+F + + +ET+ E
Sbjct: 376 IRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQYRETLRE 435
Query: 75 GEPIGSKVTQVNAIDKDGTFPNNQL 99
G + Q+ A D D PN L
Sbjct: 436 NVEEGYPILQLRATDGDAP-PNANL 459
Score = 35.8 bits (81), Expect = 0.078, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Query: 21 PLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVL-EGEPIG 79
PLDY+ + + L + + + L VHI + D N P+F + E P+G
Sbjct: 809 PLDYKQERYFKLVLTASD---RALHDHCYVHINITDANTHRPVFQSAHYSVSMNEDRPVG 865
Query: 80 SKVTQVNAIDKD 91
S V ++A D D
Sbjct: 866 STVVVISASDDD 877
Score = 35.4 bits (80), Expect = 0.096, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATV--HIILEDVNDEIPLFTE-REQETV 72
I + +D E ++ Y L + + G + ATV HI + D ND P F+E R V
Sbjct: 486 ISTSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQV 545
Query: 73 LEGEPIGSKVTQVNAIDKD 91
E + V +V A DKD
Sbjct: 546 REDVRPHTVVLRVTATDKD 564
Score = 32.7 bits (73), Expect = 0.61, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLF 64
LDYE +EY + ++ + L S ATVH+ L D ND P+
Sbjct: 1121 LDYEARQEYVIVVQAT---SAPLVSRATVHVRLVDQNDNSPVL 1160
>sp|Q9R0M0|CELR2_MOUSE Cadherin EGF LAG seven-pass G-type receptor 2 OS=Mus musculus
GN=Celsr2 PE=1 SV=2
Length = 2920
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/80 (42%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLAS-EATVHIILEDVND-EIPLFTERE-QETV 72
+ V PLDYET KEY L IR ++ G L++ V + + D+ND P+F Q TV
Sbjct: 456 LDVVSPLDYETTKEYTLRIRAQDGGRPPLSNVSGLVTVQVLDINDIRPPIFVSTPFQATV 515
Query: 73 LEGEPIGSKVTQVNAIDKDG 92
LE P+G V V AID D
Sbjct: 516 LESVPLGYLVLHVQAIDADA 535
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLF-TEREQETVLEGEPIGS 80
LDYE Y L I +NG Q + + I++ DVND P F + Q TV E P +
Sbjct: 774 LDYEDQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGTVYEDVPPFT 833
Query: 81 KVTQVNAIDKD 91
V Q+ A D+D
Sbjct: 834 SVLQILATDRD 844
Score = 47.0 bits (110), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVL-E 74
I V LD E + Y+ + ++G L + A+V + + DVND P FT+ E L E
Sbjct: 563 ISVAAELDREEVDFYSFGVEARDHGTPALTASASVSVTILDVNDNNPTFTQPEYTVRLNE 622
Query: 75 GEPIGSKVTQVNAIDK 90
+G+ V V+A+D+
Sbjct: 623 DAAVGTSVVTVSAVDR 638
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTERE-QETVLEGEPIGS 80
LD ET + + +++G + ++ AT+ I++ D ND P+F ++E +E++ E +G
Sbjct: 247 LDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLEVGY 306
Query: 81 KVTQVNAIDKDGTFPNNQLL 100
+V V A D D PN +L
Sbjct: 307 EVLTVRATDGDAP-PNANIL 325
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 11/83 (13%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQ--QLASEATVHIILEDVNDEIPLFTERE----- 68
I+ P+D E ++ Y LT+ + G +S A V + +ED ND P F+E+
Sbjct: 349 IRTRGPVDREEVESYKLTVEASDQGRDPGPRSSTAIVFLSVEDDNDNAPQFSEKRYVVQV 408
Query: 69 QETVLEGEPIGSKVTQVNAIDKD 91
+E V G P V +V A D+D
Sbjct: 409 REDVTPGAP----VLRVTASDRD 427
Score = 36.6 bits (83), Expect = 0.046, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQET-VLEGEPIGS 80
LD E + +Y L + G + V + + D ND P+F + E + V E PIG
Sbjct: 880 LDRENVAQYVLRAYAVDKGMPPARTPMEVTVTVLDGNDNPPVFEQDEFDVFVEENSPIGL 939
Query: 81 KVTQVNAIDKD-GTFPNNQLL 100
V +V A D D GT N Q++
Sbjct: 940 AVARVTATDPDEGT--NAQIM 958
Score = 32.7 bits (73), Expect = 0.67, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTERE 68
LDYE EY L I+ + L S ATVH+ L D ND P+ E
Sbjct: 985 LDYEDRPEYVLVIQAT---SAPLVSRATVHVRLLDRNDNPPVLGNFE 1028
>sp|O88278|CELR3_RAT Cadherin EGF LAG seven-pass G-type receptor 3 OS=Rattus norvegicus
GN=Celsr3 PE=2 SV=1
Length = 3313
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 6/82 (7%)
Query: 14 ADIKVNHPLDYETIKEYNLTIRVENNGAQQLASE---ATVHIILEDVNDEIPLFTERE-Q 69
+I+V PLD+E +EY L IR ++ G L++ A++ ++ D+ND P+F Q
Sbjct: 591 GEIQVMAPLDFEAEREYALRIRAQDAGRPPLSNNTGLASIQVV--DINDHSPIFVSTPFQ 648
Query: 70 ETVLEGEPIGSKVTQVNAIDKD 91
+VLE P+G V + A+D D
Sbjct: 649 VSVLENAPLGHSVIHIQAVDAD 670
Score = 53.9 bits (128), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVL-E 74
+ V+ PLD E+++ Y + ++G+ L++ A+V + + DVND P FT +E L E
Sbjct: 699 VSVSGPLDRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHLRLNE 758
Query: 75 GEPIGSKVTQVNAIDKDG 92
+G+ V V A+D+D
Sbjct: 759 DAAVGTSVVSVTAVDRDA 776
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE-TVLE 74
I + PLDYE Y L I +NG Q A V +++ DVND P F V E
Sbjct: 904 ITLQAPLDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSE 963
Query: 75 GEPIGSKVTQVNAIDKDG 92
P + V Q++A D+D
Sbjct: 964 DAPPFTSVLQISATDRDA 981
Score = 49.3 bits (116), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQET-VLEGEPIGS 80
LD E + Y LT + G L + ++ + ++DVND P+F E E V E +GS
Sbjct: 1016 LDREAVPVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKENSIVGS 1075
Query: 81 KVTQVNAIDKDGTFPNNQLL 100
V Q+ A+D D PN ++
Sbjct: 1076 VVAQITAVDPDDG-PNAHIM 1094
Score = 43.1 bits (100), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTERE-QETVLE 74
I+ LD E+++ + L + +++G+ +L++ V + + D ND P+F + + +ET+ E
Sbjct: 376 IRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQYRETLRE 435
Query: 75 GEPIGSKVTQVNAIDKDGTFPNNQL 99
G + Q+ A D D PN L
Sbjct: 436 NVEEGYPILQLRATDGDAP-PNANL 459
Score = 35.8 bits (81), Expect = 0.078, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Query: 21 PLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVL-EGEPIG 79
PLDY+ + + L + + + L VHI + D N P+F + E P+G
Sbjct: 809 PLDYKQERYFKLVLTASD---RALHDHCYVHINITDANTHRPVFQSAHYSVSMNEDRPVG 865
Query: 80 SKVTQVNAIDKD 91
S V ++A D D
Sbjct: 866 STVVVISASDDD 877
Score = 35.4 bits (80), Expect = 0.096, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATV--HIILEDVNDEIPLFTE-REQETV 72
I + +D E ++ Y L + + G + ATV HI + D ND P F+E R V
Sbjct: 486 ISTSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSEKRYVAQV 545
Query: 73 LEGEPIGSKVTQVNAIDKD 91
E + V +V A DKD
Sbjct: 546 REDVRPHTVVLRVTATDKD 564
Score = 32.7 bits (73), Expect = 0.61, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLF 64
LDYE +EY + ++ + L S ATVH+ L D ND P+
Sbjct: 1121 LDYEARQEYVIVVQAT---SAPLVSRATVHVRLVDQNDNSPVL 1160
>sp|Q9HC56|PCDH9_HUMAN Protocadherin-9 OS=Homo sapiens GN=PCDH9 PE=1 SV=2
Length = 1237
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 13 WADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQET- 71
W + V LD E Y + I+VE+ G Q +S A + + + DVND P+F E + E
Sbjct: 201 WPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQVTVSDVNDNRPVFKEGQVEVH 260
Query: 72 VLEGEPIGSKVTQVNAIDKD 91
+ E P+G+ V Q++A D D
Sbjct: 261 IPENAPVGTSVIQLHATDAD 280
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE-TVLEGEPIGS 80
LDYE KE++ I ++G L A V + LED ND P+F + E +V E G
Sbjct: 427 LDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSENNRRGL 486
Query: 81 KVTQVNAIDKD 91
+T ++A D+D
Sbjct: 487 YLTTISATDED 497
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTERE-QETVLEGEPIGS 80
D E + + T+ +NG L S+A V + + D ND P FT Q V E P S
Sbjct: 530 FDREEQERFIFTVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYS 589
Query: 81 KVTQVNAIDKDG 92
V + D D
Sbjct: 590 TVGVITVTDADA 601
>sp|Q19319|CADH4_CAEEL Cadherin-4 OS=Caenorhabditis elegans GN=cdh-4 PE=1 SV=3
Length = 4292
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 14 ADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQET-V 72
D+ ++ +DYE IK+YNL + ++ G L SEA + I +ED ND P F + V
Sbjct: 3240 GDVLISQSIDYEKIKKYNLKVIAKDGGRPPLRSEALLEIHVEDENDHAPTFDDCNMTALV 3299
Query: 73 LEGEPIGSKVTQVNAIDKDGTFPNN 97
EGE IG ++ + + D DG P N
Sbjct: 3300 QEGEAIGHRLLKFSVSDLDG--PKN 3322
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 2/81 (2%)
Query: 14 ADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVL 73
D+ + LDYE ++Y+L + V + +Q++SEA +++EDVNDE+P F + +
Sbjct: 2236 GDVTITGQLDYEKTQKYDLKL-VATSSGKQVSSEAEFIVLIEDVNDEMPEFIRSDVSAKI 2294
Query: 74 EGEPI-GSKVTQVNAIDKDGT 93
I G +T ++A D D T
Sbjct: 2295 SDSAITGQFITIMSATDMDTT 2315
Score = 45.8 bits (107), Expect = 7e-05, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 21 PLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLF-TEREQETVLEGEPIG 79
PLD+ET+ LT+ +++G L +EA V I + D ND P F E+ V E G
Sbjct: 3137 PLDFETLSALKLTVVAKDSGVPPLETEAQVEISVMDENDNAPKFEKEKYVGKVKENSKSG 3196
Query: 80 SKVTQVNAIDKD 91
KV V A+D D
Sbjct: 3197 EKVLTVKALDVD 3208
Score = 33.1 bits (74), Expect = 0.48, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 20 HPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDE---IPLFTEREQETVLEGE 76
+PLDY +NL+I V ++G L++ +H+ L D+ I ++ +V E
Sbjct: 888 YPLDYHKTPFFNLSIEVADHGDPILSTSCHLHVELVDIAHNHLAIEFDDVAKEASVYENS 947
Query: 77 PIGSKVTQVNA 87
IG++V + A
Sbjct: 948 EIGTEVIMIEA 958
Score = 32.3 bits (72), Expect = 0.99, Method: Composition-based stats.
Identities = 18/70 (25%), Positives = 34/70 (48%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVLEGEPIGSK 81
LD E L ++ +++ + + A V + +E++NDE P+F + + IG+
Sbjct: 1942 LDREKSAIIRLVVQAKSHEKNPVMARALVVVGIENINDETPIFMGTPYDITIGHSDIGTV 2001
Query: 82 VTQVNAIDKD 91
V + ID D
Sbjct: 2002 VLEPKVIDND 2011
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQET-VLE 74
I V+ L+Y K Y + + VE+ ++ S T+ +I D+ND+ P F T + E
Sbjct: 2423 IHVSRVLNYHRDKRYQIPLVVEDATGRRAFSTLTLSVI--DINDKPPFFVLPFYSTSISE 2480
Query: 75 GEPIGSKVTQVNAIDKD 91
G V V+A D D
Sbjct: 2481 SAKEGDTVMMVSATDDD 2497
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 30 YNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTER--EQETVLEGEPIGSKVTQVNA 87
YN + +G + +E V I + D ND P+F+ + Q ++ G+P G + +V+A
Sbjct: 458 YNFKVIASLHGINEKLAEKDVSIEILDSNDHAPVFSAKWMRQTPIVIGKP-GDVLVKVDA 516
Query: 88 IDKD 91
D+D
Sbjct: 517 TDQD 520
Score = 31.6 bits (70), Expect = 1.7, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVLEGEPIGSK 81
LD E E+ L + + + G QL S V + + D ND P FT+ + + G K
Sbjct: 1114 LDREKQSEHELWVSICDGGEPQLCSNVIVIVNVLDENDNSPTFTQAIHHYSVRSKFAG-K 1172
Query: 82 VTQVNAIDKD 91
+ ++ A+D D
Sbjct: 1173 LCRIFAVDAD 1182
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 4/79 (5%)
Query: 14 ADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQ-ETV 72
++ V PLDYE + ++V+ + S AT + + D ND P F V
Sbjct: 1420 GNVIVMEPLDYEAARRIRAVVQVQQ---ANMKSFATFSVNINDENDNSPYFVGHTAFAFV 1476
Query: 73 LEGEPIGSKVTQVNAIDKD 91
E + + + V A DKD
Sbjct: 1477 DESDTVDDVLATVTAFDKD 1495
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVLEG 75
+ V LD E I Y L R + G ++ I++ DVND P F E+E+ +
Sbjct: 2731 LTVASQLDREKIDHYKLIARATDEGG--FNTDLPFTIVVSDVNDSPPQF-EKEEFNIDLH 2787
Query: 76 EPIGSKVTQVNAIDKDGTFPNN 97
P S + + D D + PNN
Sbjct: 2788 LPSTSPILHFSIKDDDLS-PNN 2808
>sp|Q5DRE0|PCDB1_PANTR Protocadherin beta-1 OS=Pan troglodytes GN=PCDHB1 PE=3 SV=1
Length = 818
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 13 WADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTE---REQ 69
+A++ +N PLD E E NLTI + G+ + A +H+++ DVND +P F+ R Q
Sbjct: 191 YAELVLNKPLDREKQPEVNLTITAVDGGSPPKSGTAHIHVVVLDVNDHVPQFSRLVYRAQ 250
Query: 70 ETVLEGEPIGSKVTQVNAIDKD 91
V E P GS V V A+D D
Sbjct: 251 --VSENSPNGSLVATVTAVDLD 270
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 19 NHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQ-ETVLEGEP 77
+ LD E + YN+T+ + G L++E + +++ DVND P+F E TV E
Sbjct: 407 DRSLDREEVSGYNITLVAMDTGPPSLSAETMIEVLISDVNDNPPIFREDSYILTVRENNS 466
Query: 78 IGSKVTQVNAIDKD 91
+ +V+A D D
Sbjct: 467 PAVFIGKVHAEDLD 480
Score = 38.1 bits (87), Expect = 0.016, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 7/77 (9%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVL-------E 74
+DYE I+++ ++ + G L+S+ TV +++ D ND P+ Q L
Sbjct: 520 MDYEAIQDFQFVVKATDGGFLSLSSQVTVRVVVLDDNDNRPMILYPLQNGTLPCNDLVPR 579
Query: 75 GEPIGSKVTQVNAIDKD 91
G VT+V A+D D
Sbjct: 580 SAEAGYLVTKVVAVDGD 596
>sp|Q9Y5F3|PCDB1_HUMAN Protocadherin beta-1 OS=Homo sapiens GN=PCDHB1 PE=2 SV=2
Length = 818
Score = 53.9 bits (128), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 13 WADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTE---REQ 69
+A++ +N PLD E E NLTI + G+ + A +H+++ DVND +P F+ R Q
Sbjct: 191 YAELVLNKPLDREEQPEVNLTITAVDGGSPPKSGTAHIHVVVLDVNDHVPQFSRLVYRAQ 250
Query: 70 ETVLEGEPIGSKVTQVNAIDKD 91
V E P GS V V A+D D
Sbjct: 251 --VSENSPNGSLVATVTAVDLD 270
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 19 NHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQ-ETVLEGEP 77
+ LD E + YN+TI + G L++E + +++ DVND P+F E TV E
Sbjct: 407 DRSLDREEVSGYNITIVAMDTGPPSLSAETMIEVLISDVNDNPPIFREDSYILTVRENNS 466
Query: 78 IGSKVTQVNAIDKD 91
+ +V+A D D
Sbjct: 467 PAVFIGKVHAEDLD 480
Score = 38.1 bits (87), Expect = 0.017, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 7/77 (9%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVL-------E 74
+DYE I+++ ++ + G L+S+ TV +++ D ND P+ Q L
Sbjct: 520 MDYEAIQDFQFVVKATDGGFLSLSSQVTVRVVVLDDNDNRPMILYPLQNGTLPCNDLVPR 579
Query: 75 GEPIGSKVTQVNAIDKD 91
G VT+V A+D D
Sbjct: 580 SAEAGYLVTKVVAVDGD 596
>sp|Q8TDW7|FAT3_HUMAN Protocadherin Fat 3 OS=Homo sapiens GN=FAT3 PE=2 SV=2
Length = 4589
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVL-E 74
+KV LD E + Y+L ++ ++G ++S ATV+I + DVND P+FT V+ E
Sbjct: 3398 VKVKKKLDRERVSGYSLLVQAVDSGIPAMSSTATVNIDISDVNDNSPVFTPANYTAVIQE 3457
Query: 75 GEPIGSKVTQVNAIDKD 91
+P+G+ + Q+ D+D
Sbjct: 3458 NKPVGTSILQLVVTDRD 3474
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 51/93 (54%), Gaps = 8/93 (8%)
Query: 11 FTWADIKVNHPLDYETIKEYNLTIRVEN--NGAQQLASEATVHIILEDVNDEIPLFTERE 68
F +KV PLDYE Y LTIR + GA+ +E TV +++ DVND P+F +
Sbjct: 2235 FDTGVLKVVSPLDYEVTSAYKLTIRASDALTGAR---AEVTVDLLVNDVNDNPPIFDQPT 2291
Query: 69 QETVL-EGEPIGSKVTQVNAIDKDGTFPNNQLL 100
T L E IG+ V QV +ID D NN+++
Sbjct: 2292 YNTTLSEASLIGTPVLQVVSIDADSE--NNKMV 2322
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILE--DVNDEIPLFTEREQETV-LEGEPI 78
LD+ETI ++ + V ++G+ QL +E+ V + +E DVND P+FT+ ET+ L +
Sbjct: 1839 LDHETIAHFHFHVHVRDSGSPQLTAESPVEVNIEVTDVNDNPPVFTQAVFETILLLPTYV 1898
Query: 79 GSKVTQVNAIDKDGTFP 95
G +V +V+A D D P
Sbjct: 1899 GVEVLKVSATDPDSEVP 1915
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQET-VLEGEPIGS 80
LD+E ++ L +R ++G L+SE VHI + DVND P+F + E+ V E P G
Sbjct: 2352 LDHELVQHCTLKVRSIDSGFPSLSSEVLVHIYISDVNDNPPVFNQLIYESYVSELAPRGH 2411
Query: 81 KVTQVNAIDKDGT 93
VT V A D D +
Sbjct: 2412 FVTCVQASDADSS 2424
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVL-E 74
I V+ LDYE K + L + ++ G L++ ATV+I L DVND P F++ V+ E
Sbjct: 3293 ISVSEVLDYELCKRFYLVVEAKDGGTPALSAVATVNINLTDVNDNPPKFSQDVYSAVISE 3352
Query: 75 GEPIGSKVTQVNAIDKDGTFPNNQL 99
+G V + A D D PN Q+
Sbjct: 3353 DALVGDSVILLIAEDVDSQ-PNGQI 3376
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 20 HPLDYETIKEYNLTIRV-ENNGAQQLASEATVHIILEDVNDEIPLFTEREQ-ETVLEGEP 77
PLD E YN+++R + + Q L+S TV I + D+ND P+F R+ TV E
Sbjct: 3191 QPLDREQQSSYNISVRATDQSPGQSLSSLTTVTITVLDINDNPPVFERRDYLVTVPEDTS 3250
Query: 78 IGSKVTQVNAIDKD 91
G++V V A KD
Sbjct: 3251 PGTQVLAVFATSKD 3264
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 10 LFTWADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTER-E 68
+ T ADI LD ET+ Y LT+ + G L S V+I +EDVND PL +E
Sbjct: 1099 VITAADI-----LDRETMGSYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIY 1153
Query: 69 QETVLEGEPIGSKVTQVNAIDKDGT 93
V+E P V Q+ A D D +
Sbjct: 1154 YPVVMENSPKDVSVIQIQAEDPDSS 1178
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQET-VLE 74
+KV P+D E Y L I + + G Q +S + I +ED ND P+F + +LE
Sbjct: 783 LKVLMPMDREHTDLYLLNITIYDLGNPQKSSWRLLTINVEDANDNSPVFIQDSYSVNILE 842
Query: 75 GEPIGSKVTQVNAIDKD 91
IG+++ QV A DKD
Sbjct: 843 SSGIGTEIIQVEARDKD 859
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQET-VLEGEPIGS 80
LD E I Y+L + + G + ++ +H+ILEDVND P+F+ T V E +
Sbjct: 3091 LDRERIPVYSLMAKATDGGGR--FCQSNIHLILEDVNDNPPVFSSDHYNTCVYENTATKA 3148
Query: 81 KVTQVNAIDKD 91
+T+V A+D D
Sbjct: 3149 LLTRVQAVDPD 3159
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 6/95 (6%)
Query: 2 NLNFLCYLL--FTWADIKVNHPLDYETIKE-YNLTIRVENNGAQ-QLASEATVHIILEDV 57
+LN L +++ FT I LD+E+ E Y +R + G+ + SE V I + +V
Sbjct: 513 SLNLLPFVINQFTGV-ISTTEELDFESSPEIYRFIVRASDWGSPYRHESEVNVTIRIGNV 571
Query: 58 NDEIPLFTEREQETVLEGE-PIGSKVTQVNAIDKD 91
ND PLF + + V+ + P+G +T V+AID D
Sbjct: 572 NDNSPLFEKVACQGVISYDFPVGGHITAVSAIDID 606
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 50 VHIILEDVNDEIPLFTEREQETV-LEGEPIGSKVTQVNAIDKD 91
V I + D+ND P+F +T+ +EG P+G+K+TQV AID D
Sbjct: 2800 VDIKVLDLNDNKPVFETSSYDTIIMEGMPVGTKLTQVRAIDMD 2842
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE-TVLEGEPIGS 80
LD+E ++ L I V + + A V + +ED ND P FT E +V E +GS
Sbjct: 1524 LDHEAQDKHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEASVFESAALGS 1583
Query: 81 KVTQVNAIDKD 91
V QV A+DKD
Sbjct: 1584 AVLQVTALDKD 1594
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 16 IKVNHPLDYETIKEYNLTI--RVENNGAQQLASEATVHIILEDVNDEIPLFTEREQET-V 72
+ V LD E+ Y+L I R + QQL S T+ + L+DVND P F V
Sbjct: 886 VYVADQLDRESKANYSLKIEARDKAESGQQLFSVVTLKVFLDDVNDCSPAFIPSSYSVKV 945
Query: 73 LEGEPIGSKVTQVNAIDKD 91
LE P+G+ + + D D
Sbjct: 946 LEDLPVGTVIAWLETHDPD 964
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 22 LDYETIKEYNLTIRVENNG-AQQLASEATVHIILEDVNDEIPLFT-EREQETVLEGEPIG 79
LD+ET + ++ + G A L+S A V + + D+ND P+F E + V E +P G
Sbjct: 2881 LDHETDPTFTFSVVASDLGEAFSLSSTALVSVRVTDINDNAPVFAQEVYRGNVKESDPPG 2940
Query: 80 SKVTQVNAIDKDGTFPNNQL 99
V ++ D+D + N Q+
Sbjct: 2941 EVVAVLSTWDRDTSDVNRQV 2960
Score = 36.2 bits (82), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVL-E 74
I LDYE Y L I+ N +AS ATV+I + D ND P+F + L E
Sbjct: 1723 ITTQKALDYERTSSYQLIIQATNMAG--MASNATVNIQIVDENDNAPVFLFSQYSGSLSE 1780
Query: 75 GEPIGSKVTQVN 86
PI S V ++
Sbjct: 1781 AAPINSIVRSLD 1792
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 47 EATVHIILEDVNDEIPLFTEREQETVL-EGEPIGSKVTQVNAIDKD 91
+A V I +ED ND P F + + + E P+G+ V V+A DKD
Sbjct: 455 KAQVTISIEDANDHTPEFQQPLYDAYVNESVPVGTSVLTVSASDKD 500
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNG---AQQLASEATVHIILEDVNDEIPLFTERE-QET 71
I+++ LDYE + YNLT+R ++ G + S V ++ + N P F + +
Sbjct: 992 IRLSKELDYEKQQFYNLTVRAKDKGRPVSLSSVSFVEVEVVDVNENLHTPYFPDFAVVGS 1051
Query: 72 VLEGEPIGSKVTQVNAIDKD 91
V E IG+ V QV A D+D
Sbjct: 1052 VKENSRIGTSVLQVTARDED 1071
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVLEGE-PIGS 80
LD E E +++I V + TV +I+ D ND P F E + + G
Sbjct: 2558 LDRENPLEGDVSIFVRALDGGGRTTFCTVRVIVVDENDNAPQFMTVEYRASVRADVGRGH 2617
Query: 81 KVTQVNAIDKD 91
VTQV AID D
Sbjct: 2618 LVTQVQAIDPD 2628
>sp|Q6KEQ9|PC11X_PIG Protocadherin-11 X-linked OS=Sus scrofa GN=PCDH11X PE=2 SV=1
Length = 1117
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE-TVLEGEPIGS 80
LD E Y + I+VE+ G Q +S A + + + D ND P+F E E E ++ E P+GS
Sbjct: 207 LDREEKDTYVMKIKVEDGGFPQRSSTAILQVSVADTNDNRPVFKENEIEVSIPENAPVGS 266
Query: 81 KVTQVNAIDKD 91
VTQ++A D D
Sbjct: 267 SVTQLHATDAD 277
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE-TVLEGEPIGS 80
LDYE+ +EY + + + G L + + I ++D ND P+FT+ +V E G+
Sbjct: 424 LDYESTREYAIKLLAADAGKPPLNQSSMLLIKVKDENDNAPVFTQPFLSLSVPENNSPGT 483
Query: 81 KVTQVNAIDKDG 92
++T+++A+D D
Sbjct: 484 QLTKISAMDADS 495
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTERE 68
LD E ++Y+ T+ ++NG L + ATV + + D ND P+FT E
Sbjct: 528 LDREKQEKYSFTVLAKDNGMPPLMTNATVLVTVLDQNDNSPVFTHNE 574
Score = 32.7 bits (73), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVLEG 75
I+ N D E + Y ++ E+ G +S A V I + DVND P+F E
Sbjct: 625 IQPNISFDREKQESYTFYVKAEDGGRISRSSTAKVTINVVDVNDNKPVFVVPSSNYSFEL 684
Query: 76 EP----IGSKVTQVNAIDKD 91
P G+ V V AID D
Sbjct: 685 VPPSTNPGTVVFTVVAIDND 704
>sp|Q14517|FAT1_HUMAN Protocadherin Fat 1 OS=Homo sapiens GN=FAT1 PE=1 SV=2
Length = 4588
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 14 ADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVL 73
++KV LD ETI Y LT++ +NG+ + TV+I + DVND P+F+ ++
Sbjct: 3390 GEVKVTKLLDRETISGYTLTVQASDNGSPPRVNTTTVNIDVSDVNDNAPVFSRGNYSVII 3449
Query: 74 -EGEPIGSKVTQVNAIDKDGT 93
E +P+G V Q+ D+D +
Sbjct: 3450 QENKPVGFSVLQLVVTDEDSS 3470
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Query: 11 FTWADIKVNHPLDYETIKEYNLTIRVENN--GAQQLASEATVHIILEDVNDEIPLFTERE 68
F I V PLD+E Y L+IR ++ GA +E V II++D+ND P+F ++
Sbjct: 2231 FNTGVINVIAPLDFEAHPAYKLSIRATDSLTGAH---AEVFVDIIVDDINDNPPVFAQQS 2287
Query: 69 QETVL-EGEPIGSKVTQVNAIDKD 91
L E IG+ V QV A D D
Sbjct: 2288 YAVTLSEASVIGTSVVQVRATDSD 2311
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVL-EGEPIGS 80
LDYE+ EY LT+ + G L+ ATV++ + D+ND P+F++ TV+ E +
Sbjct: 3293 LDYESSHEYYLTVEATDGGTPSLSDVATVNVNVTDINDNTPVFSQDTYTTVISEDAVLEQ 3352
Query: 81 KVTQVNAIDKDGTFPNNQ 98
V V A D DG P+N
Sbjct: 3353 SVITVMADDADG--PSNS 3368
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 7 CYLL-FTWADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFT 65
C+++ +K+ PLD ET +Y L I V + G Q A+ +H+++ D ND P F
Sbjct: 764 CFMIDMETGMLKILSPLDRETTDKYTLNITVYDLGIPQKAAWRLLHVVVVDANDNPPEFL 823
Query: 66 EREQET-VLEGEPIGSKVTQVNAIDKD 91
+ V E + + S++ QV A DKD
Sbjct: 824 QESYFVEVSEDKEVHSEIIQVEATDKD 850
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQET-VLEGEPIGS 80
LDYE +++ + +R + G L+S+ V + + D+ND PLF ++ E + E P G
Sbjct: 2348 LDYEQSRQHTIFVRAVDGGMPTLSSDVIVTVDVTDLNDNPPLFEQQIYEARISEHAPHGH 2407
Query: 81 KVTQVNAIDKDGT 93
VT V A D D +
Sbjct: 2408 FVTCVKAYDADSS 2420
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 14 ADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE-TV 72
++K + PLD E Y+L +R + G + +A++ + LEDVND P F+ TV
Sbjct: 3077 GELKTSTPLDREEQAVYHLLVRATDGGGR--FCQASIVLTLEDVNDNAPEFSADPYAITV 3134
Query: 73 LEGEPIGSKVTQVNAIDKDGTFPNNQLL 100
E G+ +T+V A D D N ++L
Sbjct: 3135 FENTEPGTLLTRVQATDADAGL-NRKIL 3161
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTERE-QETVLEGEPIGS 80
LD+E + ++ LT+ V + + A + + + D ND P FT + V E +GS
Sbjct: 1520 LDHEAVHQHTLTVMVRDQDVPVKRNFARIVVNVSDTNDHAPWFTASSYKGRVYESAAVGS 1579
Query: 81 KVTQVNAIDKD 91
V QV A+DKD
Sbjct: 1580 VVLQVTALDKD 1590
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 7/89 (7%)
Query: 16 IKVNHPLDYETIKEYNLTI--RVENNGAQQLASEATVHIILEDVNDEIPLFTEREQET-V 72
+K+ LD+ET K Y +I R + + +AS V I ++D ND P+F E +
Sbjct: 2760 LKLEKSLDHETTKWYQFSILARCTQDDHEMVAS-VDVSIQVKDANDNSPVFESSPYEAFI 2818
Query: 73 LEGEPIGSKVTQVNAIDKD-GTFPNNQLL 100
+E P GS+V Q+ A D D GT N Q++
Sbjct: 2819 VENLPGGSRVIQIRASDADSGT--NGQVM 2845
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNG-AQQLASEATVHIILEDVNDEIPLFTERE-QETVL 73
I++ PLD E Y L+++ + G ++L + TV + + D+ND P+F RE TV
Sbjct: 3181 IQLEKPLDRELQAVYTLSLKAVDQGLPRRLTATGTVIVSVLDINDNPPVFEYREYGATVS 3240
Query: 74 EGEPIGSKVTQVNAIDKD 91
E +G++V QV A +D
Sbjct: 3241 EDILVGTEVLQVYAASRD 3258
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 22 LDYETIKEYNLTIRVENNGAQ-QLASEATVHIILEDVNDEIPLFT-EREQETVLEGEPIG 79
LD+E Y + + ++G + QL+S A V + + DVND P FT E + TV E +P G
Sbjct: 2875 LDHEKRDNYQIKVVASDHGEKIQLSSTAIVDVTVTDVNDSPPRFTAEIYKGTVSEDDPQG 2934
Query: 80 SKVTQVNAIDKDGTFPNNQL 99
+ ++ D D N Q+
Sbjct: 2935 GVIAILSTTDADSEEINRQV 2954
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTER-EQETVLE 74
I+ + LD E+ Y LT+ + G L+S ++I +EDVND P +E ++E
Sbjct: 1091 IETSDRLDRESTSHYWLTVFATDQGVVPLSSFIEIYIEVEDVNDNAPQTSEPVYYPEIME 1150
Query: 75 GEPIGSKVTQVNAIDKDGTFPNNQLL 100
P V Q+ A D D + N++L+
Sbjct: 1151 NSPKDVSVVQIEAFDPDSS-SNDKLM 1175
Score = 35.8 bits (81), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVL-E 74
I V PLD E YNLT+ +G + ++ + +I D ND P F+ + E V+ E
Sbjct: 1411 IIVAKPLDAEQKSNYNLTVEA-TDGTTTILTQVFIKVI--DTNDHRPQFSTSKYEVVIPE 1467
Query: 75 GEPIGSKVTQVNAIDKD 91
+++ Q++A+D+D
Sbjct: 1468 DTAPETEILQISAVDQD 1484
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQ-QLASEATVHIILEDVNDEI--PLFTE-REQET 71
+++ LD+E + YNLT+R ++ G L+S V + + DVN+ + P+F+ E+ T
Sbjct: 983 VRIVQQLDFEKKQVYNLTVRAKDKGKPVSLSSTCYVEVEVVDVNENLHPPVFSSFVEKGT 1042
Query: 72 VLEGEPIGSKVTQVNAIDKDG 92
V E P+GS V V+A D+D
Sbjct: 1043 VKEDAPVGSLVMTVSAHDEDA 1063
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 3/79 (3%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQ--QLASEATVHIILEDVNDEIPLFTEREQET-V 72
+ + PLD E E++L I + + QL S V + LEDVND P F V
Sbjct: 877 VNIARPLDRELQHEHSLKIEARDQAREEPQLFSTVVVKVSLEDVNDNPPTFIPPNYRVKV 936
Query: 73 LEGEPIGSKVTQVNAIDKD 91
E P G+ + + A D D
Sbjct: 937 REDLPEGTVIMWLEAHDPD 955
Score = 32.7 bits (73), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 14 ADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVL 73
IK LD EY+L ++ + G+ ++ +V I + ++ P FT +E L
Sbjct: 1617 GSIKTAKELDRSNQAEYDLMVKATDKGSPPMSEITSVRIFVTIADNASPKFTSKEYSVEL 1676
Query: 74 -EGEPIGSKVTQVNA 87
E IGS V V A
Sbjct: 1677 SETVSIGSFVGMVTA 1691
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQET-VLEGEPIGS 80
LD ET E +++R+ A + TV++IL D ND P F + E + G+
Sbjct: 2554 LDRETPAEKVISVRLMAKDAGGKVAFCTVNVILTDDNDNAPQFRATKYEVNIGSSAAKGT 2613
Query: 81 KVTQVNAIDKD 91
V +V A D D
Sbjct: 2614 SVVKVLASDAD 2624
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTERE 68
LD+ET+ Y L I+ N L++ TV + L+D ND P+F + E
Sbjct: 1725 LDFETLPIYTLIIQGTNMAG--LSTNTTVLVHLQDENDNAPVFMQAE 1769
>sp|Q9H251|CAD23_HUMAN Cadherin-23 OS=Homo sapiens GN=CDH23 PE=1 SV=2
Length = 3354
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 12 TWADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTERE-QE 70
+ + N +DYE + N T+R +NG+ A+E V++ + D+ND P+F + QE
Sbjct: 2350 SAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLEIVDINDNNPIFDQPSYQE 2409
Query: 71 TVLEGEPIGSKVTQVNAIDKD-GTF 94
V E P+G+ + V A D D G F
Sbjct: 2410 AVFEDVPVGTIILTVTATDADSGNF 2434
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 12 TWADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEA---TVHIILEDVNDEIPLFTERE 68
T + VN PLD E I EY LTI V++N + + I L D ND PLFT+
Sbjct: 1904 TTGIVTVNRPLDRERIPEYKLTISVKDNPENPRIARRDYDLLLIFLSDENDNHPLFTKST 1963
Query: 69 -QETVLEGEPIGSKVTQVN----AIDKD 91
Q V+E P G+ +T +N A+D D
Sbjct: 1964 YQAEVMENSPAGTPLTVLNGPILALDAD 1991
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVL-EGEPIGS 80
LDYE I+ + LTI + G ++ ++++ DVND +P F + L E EP +
Sbjct: 521 LDYELIQRFTLTIIARDGGGEETTGRVRINVL--DVNDNVPTFQKDAYVGALRENEPSVT 578
Query: 81 KVTQVNAIDKDGTFPNNQL 99
++ ++ A D+D PNNQ+
Sbjct: 579 QLVRLRATDEDSP-PNNQI 596
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 16 IKVNHPLDYETIKEYNLTIRV-ENNGAQQLASEATVHIILEDVNDEIPLFTEREQET-VL 73
+ V LDYET + Y LT+ + + + L++ A + II+ DV D P+F T +
Sbjct: 187 VTVIRELDYETTQAYQLTVNATDQDKTRPLSTLANLAIIITDVQDMDPIFINLPYSTNIY 246
Query: 74 EGEPIGSKVTQVNAIDKDGTFPNN 97
E P G+ V + AID+D P
Sbjct: 247 EHSPPGTTVRIITAIDQDKGRPRG 270
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 4/89 (4%)
Query: 5 FLCYLLFTWADIKV-NHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPL 63
FL +L+ I+V N +D E + Y LT+ + G L+ A V I+++D+ND P
Sbjct: 2116 FLIHLV--TGVIRVGNATIDREEQESYRLTVVATDRGTVPLSGTAIVTILIDDINDSRPE 2173
Query: 64 FTEREQE-TVLEGEPIGSKVTQVNAIDKD 91
F Q +VLE G+ + + AID D
Sbjct: 2174 FLNPIQTVSVLESAEPGTVIANITAIDHD 2202
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE-TVLEGEPIGS 80
LD ETI YNLTI + G L+S V I + D+ND P+ T+ E P+ S
Sbjct: 1809 LDRETIAFYNLTICARDRGMPPLSSTMLVGIRVLDINDNDPVLLNLPMNITISENSPVSS 1868
Query: 81 KVTQVNAIDKD 91
V V A D D
Sbjct: 1869 FVAHVLASDAD 1879
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 20 HPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQET--VLEGEP 77
PLD E + L + N+ + S V + +ED+NDE P+FT+++ + E
Sbjct: 1164 RPLDRERNSSHVLIVEAYNHDLGPMRSSVRVIVYVEDINDEAPVFTQQQYSRLGLRETAG 1223
Query: 78 IGSKVTQVNAIDKD 91
IG+ V V A D+D
Sbjct: 1224 IGTSVIVVQATDRD 1237
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 22 LDYETIKEYNLTIRVENNG--AQQLASEATVHIILEDVNDEIPLFTEREQE-TVLEGEPI 78
LD ET Y L + +NG ++ ATV + + DVND P+F + E +V E P
Sbjct: 1058 LDRETTAAYMLILEAIDNGPVGKRHTGTATVFVTVLDVNDNRPIFLQSSYEASVPEDIPE 1117
Query: 79 GSKVTQVNAIDKD 91
G + Q+ A D D
Sbjct: 1118 GHSILQLKATDAD 1130
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 12 TWADIKVNHPLDYETIKEYNLTIRVENNGAQQLAS--EATVHIILE--DVNDEIPLFTER 67
T DI V LD E Y LT ++N ++ E +V ++++ DVND P F++
Sbjct: 2453 TTGDIYVLSSLDREKKDHYILTALAKDNPGDVASNRRENSVQVVIQVLDVNDCRPQFSKP 2512
Query: 68 EQET-VLEGEPIGSKVTQVNAIDKDGTFPNNQL 99
+ T V E EP G+ V + A D+D PN +L
Sbjct: 2513 QFSTSVYENEPAGTSVITMMATDQD-EGPNGEL 2544
Score = 36.6 bits (83), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 14 ADIKVNHPLDYETIKEYNLTIRVENNGA--QQLASEATVHIILEDVNDEIPLFTEREQET 71
+I LD ET EY L +R + G Q ATV+I L D+ND P + +
Sbjct: 726 GEITTTSLLDRETKSEYILIVRAVDGGVGHNQKTGIATVNITLLDINDNHPTWKDAPYYI 785
Query: 72 -VLEGEPIGSKVTQVNAIDKD 91
++E P S VT V A+D D
Sbjct: 786 NLVEMTPPDSDVTTVVAVDPD 806
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVL-E 74
I+V PLDYET+ Y+ + N A V I L + ND P+F++ L E
Sbjct: 413 IRVAIPLDYETVDRYDFDL-FANESVPDHVGYAKVKITLINENDNRPIFSQPLYNISLYE 471
Query: 75 GEPIGSKVTQVNAIDKD-GTF 94
+G+ V V A D D GTF
Sbjct: 472 NVTVGTSVLTVLATDNDAGTF 492
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 21 PLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVLEGEP--I 78
P D E Y+L VE+ G L++ V++ + D ND P+F + E +L+ P +
Sbjct: 1591 PPDRERQSFYHLVATVEDEGTPTLSATTHVYVTIVDENDNAPMFQQPHYEVLLDEGPDTL 1650
Query: 79 GSKVTQVNAIDKD 91
+ + + A+D D
Sbjct: 1651 NTSLITIQALDLD 1663
Score = 35.8 bits (81), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIP-LFTEREQETVLEGEPIGS 80
LD E I EY L + + G +S +T+ I + DVNDE P F +V E P
Sbjct: 953 LDRERIAEYQLRVVASDAGTPTKSSTSTLTIHVLDVNDETPTFFPAVYNVSVSEDVPREF 1012
Query: 81 KVTQVNAIDKD 91
+V +N D D
Sbjct: 1013 RVVWLNCTDND 1023
Score = 35.8 bits (81), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPL--FTEREQETVL 73
I V +D E Y LT+ V ++G ++ S V+I + D ND P FT ++
Sbjct: 1371 ITVQGLVDREKGDFYTLTV-VADDGGPKVDSTVKVYITVLDENDNSPRFDFTSDSAVSIP 1429
Query: 74 EGEPIGSKVTQVNAIDKDG 92
E P+G +V V A D D
Sbjct: 1430 EDCPVGQRVATVKAWDPDA 1448
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 50 VHIILEDVNDEIPLFTEREQET-VLEGEPIGSKVTQVNAIDKDGTFPNNQLL 100
V ++LED+ND+ P FT+ E V +GS++ QV A+D D NN L+
Sbjct: 2832 VRVVLEDINDQPPRFTKAEYTAGVATDAKVGSELIQVLALDAD--IGNNSLV 2881
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Query: 18 VNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQET-VLEGE 76
+ PLD ET E+ + V + Q V+I + DVND P F + + E
Sbjct: 89 LRQPLDRETKSEFTVEFSVSD---HQGVITRKVNIQVGDVNDNAPTFHNQPYSVRIPENT 145
Query: 77 PIGSKVTQVNAIDKD 91
P+G+ + VNA D D
Sbjct: 146 PVGTPIFIVNATDPD 160
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Query: 14 ADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVL 73
++ V PLD E + Y L + + G + + + + D+ND P+ V
Sbjct: 1477 GEVFVARPLDREELDHYILQVVASDRGTPPRKKDHILQVTILDINDNPPVIESPFGYNVS 1536
Query: 74 EGEPI--GSKVTQVNAIDKD 91
E + G+ V QV A D+D
Sbjct: 1537 VNENVGGGTAVVQVRATDRD 1556
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Query: 13 WADIKVNHPLDYETIKE--YNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQ- 69
+ I V+ PLDYE I LT+ + G L S V I + D ND P F++
Sbjct: 618 YGVISVSRPLDYEQISNGLIYLTVMAMDAGNPPLNSTVPVTIEVFDENDNPPTFSKPAYF 677
Query: 70 ETVLEGEPIGSKVTQVNAIDKD 91
+V+E G+ V +NA D D
Sbjct: 678 VSVVENIMAGATVLFLNATDLD 699
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVL-- 73
+ PL ++ ++++LT+ + G L + + + DVND P+F T+L
Sbjct: 2565 VTTQRPL--QSYEKFSLTVVATDGGEPPLWGTTMLLVEVIDVNDNRPVFVRPPNGTILHI 2622
Query: 74 -EGEPIGSKVTQVNAIDKD 91
E P+ S V +V A DKD
Sbjct: 2623 REEIPLRSNVYEVYATDKD 2641
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 43 QLASEATVHIILEDVNDEIPLFTERE-QETVLEGEPIGSKVTQVNAIDKD 91
+ S ATV + L D+ND P F VLEG P G + QV AID D
Sbjct: 869 KATSSATVFVNLLDLNDNDPTFQNLPFVAEVLEGIPAGVSIYQVVAIDLD 918
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 10/85 (11%)
Query: 22 LDYE-TIKEYNLTIRVENNG---AQQLASEATVHIILEDVNDEIPLFTEREQET---VLE 74
LDYE + Y L + + + +L S TV + + D+ND +P F R+ E V E
Sbjct: 1698 LDYEISHGRYTLIVTATDQCPILSHRLTSTTTVLVNVNDINDNVPTF-PRDYEGPFEVTE 1756
Query: 75 GEPIGSKVTQVNAIDKDGTFPNNQL 99
G+P G +V A D+D + PN Q+
Sbjct: 1757 GQP-GPRVWTFLAHDRD-SGPNGQV 1779
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 9/87 (10%)
Query: 14 ADIKVNHPLDYETIKEYNLTIRVENNGA-----QQLASEATVHIILEDVNDEIPLFTE-- 66
+ V P++ E + Y +T+ V +N + A + + + DVND P F
Sbjct: 2238 GSVMVKSPMNRELVATYEVTLSVIDNASDLPERSVSVPNAKLTVNVLDVNDNTPQFKPFG 2297
Query: 67 --REQETVLEGEPIGSKVTQVNAIDKD 91
E +LEG G+ + V A+D D
Sbjct: 2298 ITYYMERILEGATPGTTLIAVAAVDPD 2324
>sp|Q8R508|FAT3_RAT Protocadherin Fat 3 OS=Rattus norvegicus GN=Fat3 PE=1 SV=1
Length = 4555
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVL-E 74
+KV LD E + Y+L I+ ++G ++S TV+I + DVND P+FT V+ E
Sbjct: 3397 VKVKKKLDRERVSGYSLLIQAVDSGIPAMSSTTTVNIDISDVNDNSPVFTPANYTAVIQE 3456
Query: 75 GEPIGSKVTQVNAIDKD 91
+P+G+ + Q+ D+D
Sbjct: 3457 NKPVGTSILQLVVTDRD 3473
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 8/93 (8%)
Query: 11 FTWADIKVNHPLDYETIKEYNLTIRVEN--NGAQQLASEATVHIILEDVNDEIPLFTERE 68
F +KV PLDYE + Y LT+R + GA+ +E TV ++++DVND P+F +
Sbjct: 2234 FDTGVLKVISPLDYEVMSVYKLTVRASDALTGAR---AEVTVDLLVDDVNDNPPVFDQPT 2290
Query: 69 QETVL-EGEPIGSKVTQVNAIDKDGTFPNNQLL 100
T L E IG+ V Q+ + D D NN L+
Sbjct: 2291 YNTTLSESSLIGTPVLQLVSTDADSG--NNNLV 2321
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILE--DVNDEIPLFTEREQETV-LEGEPI 78
LD+E I ++ + V ++G QL +E+ V + +E DVND P+FT+ ETV L +
Sbjct: 1838 LDHEVIAHFHFHVHVRDSGNPQLTAESPVEVNIEVTDVNDNPPVFTQAVFETVLLLPTYV 1897
Query: 79 GSKVTQVNAIDKDGTFP 95
G +V +V+A D D P
Sbjct: 1898 GVEVLKVSATDPDSEVP 1914
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQET-VLEGEPIGS 80
LD+E ++ L + +NG L+SE V I + DVND P+F + E+ V E P G
Sbjct: 2351 LDHELVQHCTLKVTATDNGFPSLSSEVLVQIYISDVNDNPPVFNQLIYESYVSELAPRGH 2410
Query: 81 KVTQVNAIDKDGT 93
VT V A D D +
Sbjct: 2411 FVTCVQASDADSS 2423
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVLEG 75
I V LDYE K + L + ++ G L++ ATV I L DVND P F++ V+
Sbjct: 3292 ISVLEALDYEMCKRFYLVVEAKDGGTPALSTAATVSIDLTDVNDNPPRFSQDVYSAVISE 3351
Query: 76 EPI-GSKVTQVNAIDKDGTFPNNQL 99
+ + G V + A D D PN Q+
Sbjct: 3352 DALEGDSVILLIAEDVDSK-PNGQI 3375
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 16 IKVNHPLDYETIKEYNLTIRV-ENNGAQQLASEATVHIILEDVNDEIPLFTEREQ-ETVL 73
I + PLD E YN+++R + + Q L+S +V I + D+ND P+F R+ TV
Sbjct: 3186 IVLEQPLDREQQSSYNISVRATDQSPGQSLSSLTSVTITVLDINDNPPVFERRDYLVTVP 3245
Query: 74 EGEPIGSKVTQVNAIDKD 91
E +G++V V A KD
Sbjct: 3246 EDTSLGTQVLSVFATSKD 3263
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE-TVLE 74
+KV P+D E Y L I + + G Q +S + + +ED ND P+F + ++LE
Sbjct: 782 LKVLMPMDREHTDLYVLNITIYDLGKPQKSSWRLLTVNVEDANDNSPVFLQDSYSVSILE 841
Query: 75 GEPIGSKVTQVNAIDKD 91
IG+++ QV A DKD
Sbjct: 842 SSSIGTEIIQVEARDKD 858
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Query: 10 LFTWADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTER-E 68
+ T ADI LD ET Y LT+ + G L S V+I +EDVND PL +E
Sbjct: 1098 VITAADI-----LDRETTASYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIY 1152
Query: 69 QETVLEGEPIGSKVTQVNAIDKD 91
V+E P V Q+ A D D
Sbjct: 1153 YPVVMENSPKDVSVIQIQAEDPD 1175
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTERE-QETVLEGEPIGS 80
LD E + YNL R + G + +S TV ++LEDVND P+F+ V E +
Sbjct: 3090 LDRERVPVYNLIARATDGGGRFCSS--TVLLLLEDVNDNPPVFSSNHYTACVYENTATKA 3147
Query: 81 KVTQVNAIDKD 91
+T+V A+D D
Sbjct: 3148 LLTRVQAVDPD 3158
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 2 NLNFLCYLL--FTWADIKVNHPLDYETIKE-YNLTIRVENNGAQ-QLASEATVHIILEDV 57
+LN L + + FT I LD+E+ E Y +R + G+ + SE V I + +V
Sbjct: 512 SLNLLPFAINQFTGV-ISTTEELDFESSPETYRFIVRASDWGSPYRHESEVNVTIRVGNV 570
Query: 58 NDEIPLFTEREQETVLEGE-PIGSKVTQVNAIDKD 91
ND PLF + + V+ + P+G +T ++AID D
Sbjct: 571 NDNSPLFEKVACQGVISYDFPVGGHITAISAIDID 605
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 50 VHIILEDVNDEIPLFTEREQETV-LEGEPIGSKVTQVNAIDKD 91
V + + D+ND P+F ET+ +EG P+G+K+ QV AID D
Sbjct: 2799 VDVKVLDLNDNKPVFETSSYETIIMEGMPVGTKLAQVRAIDTD 2841
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 22 LDYETIKEYNLTI--RVENNGAQQLASEATVHIILEDVNDEIPLFTEREQET-VLEGEPI 78
LD E+ Y+L I R + QQL S T+ I L+DVND P F VLE P+
Sbjct: 891 LDRESKANYSLKIEARDKAESGQQLFSVVTLKIFLDDVNDCSPAFIPSSYSVKVLEDLPV 950
Query: 79 GSKVTQVNAIDKD 91
G+ + + D D
Sbjct: 951 GTVIAWLETQDPD 963
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE-TVLEGEPIGS 80
LD+E ++ L I V + + A V + +ED ND P FT E +V E +GS
Sbjct: 1523 LDHEAQDKHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEASVFESAALGS 1582
Query: 81 KVTQVNAIDKD 91
V QV A+DKD
Sbjct: 1583 VVLQVTALDKD 1593
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 22 LDYETIKEYNLTIRVENNG-AQQLASEATVHIILEDVNDEIPLFT-EREQETVLEGEPIG 79
LD+ET ++ + + G A L+S A V + + D+ND P+F E + V E +P G
Sbjct: 2880 LDHETDPTFSFFVVASDLGEAFSLSSMALVSVKVTDINDNAPVFAHEVYRGNVKESDPPG 2939
Query: 80 SKVTQVNAIDKDGTFPNNQL 99
V ++ +DKD + N Q+
Sbjct: 2940 EVVAVLSTLDKDTSNINRQV 2959
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 46 SEATVHIILEDVNDEIPLFTEREQETVL-EGEPIGSKVTQVNAIDKD 91
++A V I +ED ND P F E ET + E P+G+ V V+A DKD
Sbjct: 453 AKAQVTIGIEDANDHTPEFQETLYETFVNESVPVGTNVLTVSASDKD 499
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVL-E 74
I LDYE Y L I+ N +AS ATV + + D ND P+F + L E
Sbjct: 1722 ITTRRALDYEHTSSYQLIIQATNMAG--MASNATVSVQVVDENDNPPVFLFSQYSGSLSE 1779
Query: 75 GEPIGSKVTQVN 86
PI S V ++
Sbjct: 1780 AAPINSLVRSLD 1791
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVND---EIPLFTERE-QET 71
I+++ LDYE + YNLT+R ++ G S + + + P F + +
Sbjct: 991 IRLSKELDYEKQQFYNLTVRAKDKGRPVSLSSISFVEVEVVDVNENLHTPYFPDFAVVGS 1050
Query: 72 VLEGEPIGSKVTQVNAIDKD 91
V E IG+ V QV A D+D
Sbjct: 1051 VKENSRIGTSVLQVTAHDED 1070
Score = 29.3 bits (64), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Query: 8 YLLFTWADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTER 67
+L+ + I LD E E +++I + + TV +I+ D ND P F
Sbjct: 2543 FLIDSNGQIITTERLDRENPLEGDISIYLRALDGGGRTTFCTVRVIVVDENDNAPQFMTL 2602
Query: 68 EQETVLEGE-PIGSKVTQVNAIDKD 91
E + + G VTQV A+D D
Sbjct: 2603 EYRASVRADVGRGHLVTQVQALDPD 2627
>sp|Q9NYQ8|FAT2_HUMAN Protocadherin Fat 2 OS=Homo sapiens GN=FAT2 PE=1 SV=2
Length = 4349
Score = 52.4 bits (124), Expect = 8e-07, Method: Composition-based stats.
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVL-E 74
IKV P+D+E+ K Y + + + S +V+I + DVND P+F + VL E
Sbjct: 2749 IKVRKPMDHESTKLYQIDVMAHCLQNTDVVSLVSVNIQVGDVNDNRPVFEADPYKAVLTE 2808
Query: 75 GEPIGSKVTQVNAIDKD 91
P+G+ V QV AIDKD
Sbjct: 2809 NMPVGTSVIQVTAIDKD 2825
Score = 49.3 bits (116), Expect = 7e-06, Method: Composition-based stats.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQET-VLE 74
+ V PLDYE+ ++ T+R + SEATV +++EDVND P F++ T + E
Sbjct: 2225 LTVTGPLDYESKTKHVFTVRATDTALGSF-SEATVEVLVEDVNDNPPTFSQLVYTTSISE 2283
Query: 75 GEPIGSKVTQVNAIDKD 91
G P + V Q+ A D+D
Sbjct: 2284 GLPAQTPVIQLLASDQD 2300
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 14 ADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTERE-QETV 72
+++V LD E Y+L +R ++G L + + I + DVND P F + TV
Sbjct: 3376 GELQVAKALDREQASSYSLKLRATDSGQPPLHEDTDIAIQVADVNDNPPRFFQLNYSTTV 3435
Query: 73 LEGEPIGSKVTQVNAIDKDGTFPNN 97
E PIGSKV Q+ D D P N
Sbjct: 3436 QENSPIGSKVLQLILSDPDS--PEN 3458
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 18 VNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQET-VLEGE 76
VN LD+ET +Y L+I + L+ TV + + DVN+ P F + T VLE
Sbjct: 3275 VNASLDFETSPKYFLSIECSRKSSSSLSDVTTVMVNITDVNEHRPQFPQDPYSTRVLENA 3334
Query: 77 PIGSKVTQVNAIDKDG 92
+G + V+A D+DG
Sbjct: 3335 LVGDVILTVSATDEDG 3350
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTERE-QETVLE 74
I+ PLD E Y LT+ + G+ L+S V+I + D ND P ++ ++ E
Sbjct: 1089 IQTLAPLDREFASYYWLTVLAVDRGSVPLSSVTEVYIEVTDANDNPPQMSQAVFYPSIQE 1148
Query: 75 GEPIGSKVTQVNAIDKDGT 93
P+G+ V Q++A D D +
Sbjct: 1149 DAPVGTSVLQLDAWDPDSS 1167
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE-TVLEGEPIGS 80
LDYE + +++ +R + G L E V + + D+ND P F + + E V E G
Sbjct: 2337 LDYEAQQHFHVKVRAMDKGDPPLTGETLVVVNVSDINDNPPEFRQPQYEANVSELATCGH 2396
Query: 81 KVTQVNAIDKD 91
V +V AID D
Sbjct: 2397 LVLKVQAIDPD 2407
Score = 38.9 bits (89), Expect = 0.011, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 22 LDYETIKEYNLTIRVENNGAQ-QLASEATVHIILEDVNDEIPLFTERE-QETVLEGEPIG 79
LD ET + Y+ + ++G QL+S+A V + + D ND P F E + +V+E G
Sbjct: 2863 LDCETCQTYHFHVVAYDHGQTIQLSSQALVQVSITDENDNAPRFASEEYRGSVVENSEPG 2922
Query: 80 SKVTQVNAIDKDGTFPNNQL 99
V + +D D + N Q+
Sbjct: 2923 ELVATLKTLDADISEQNRQV 2942
Score = 37.7 bits (86), Expect = 0.019, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVLE-GEPIGS 80
D E + L + V +N Q ++ V + +EDVND P F T+++ G G
Sbjct: 2028 FDREQQDTHELAVEVRDNRTPQRVAQGLVRVSIEDVNDNPPKFKHLPYYTIIQDGTEPGD 2087
Query: 81 KVTQVNAIDKD 91
+ QV+A D+D
Sbjct: 2088 VLFQVSATDED 2098
Score = 37.0 bits (84), Expect = 0.034, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 12 TWADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHI-ILEDVNDEIPLFTEREQE 70
T I + PLD YNLT+ V +G++ +A++ VHI ++ ++N P F E E
Sbjct: 1398 TTGSIVIARPLDTRRRSNYNLTVEV-TDGSRTIATQ--VHIFMIANINHHRPQFLETRYE 1454
Query: 71 TVLEGEPI-GSKVTQVNAIDKD 91
+ + + G ++ +V AID+D
Sbjct: 1455 VRVPQDTVPGVELLRVQAIDQD 1476
Score = 36.2 bits (82), Expect = 0.058, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTE-REQETVLE 74
+ V PLDYE Y L + V + G Q +S + + ++D ND P F Q T+ E
Sbjct: 772 LTVAAPLDYEATNFYILNVTVYDLGTPQKSSWKLLTVNVKDWNDNAPRFPPGGYQLTISE 831
Query: 75 GEPIGSKVTQVNAIDKD 91
+G+ + ++ D D
Sbjct: 832 DTEVGTTIAELTTKDAD 848
Score = 35.8 bits (81), Expect = 0.074, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILE--DVNDEIPLFTEREQETVLEGEPI- 78
+DYE++ + + V + G+ L + +I+ DVND P F+E+ E + G PI
Sbjct: 1828 MDYESMPSFQFCVYVHDQGSPVLFAPRPAQVIIHVRDVNDSPPRFSEQIYEVAIVG-PIH 1886
Query: 79 -GSKVTQVNAIDKD 91
G ++ V A D+D
Sbjct: 1887 PGMELLMVRASDED 1900
Score = 33.9 bits (76), Expect = 0.29, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Query: 14 ADIKVNHPLDYETIKEYNLTI--RVENNGAQQLASEATVHIILEDVNDEIP-LFTEREQE 70
++ V LD E+ Y L + R + + QL S + I LEDVND P TE +
Sbjct: 873 GELVVTGHLDRESEPRYILKVEARDQPSKGHQLFSVTDLIITLEDVNDNSPQCITEHNRL 932
Query: 71 TVLEGEPIGSKVTQVNAIDKD 91
V E P G+ +T ++A D D
Sbjct: 933 KVPEDLPPGTVLTFLDASDPD 953
Score = 33.1 bits (74), Expect = 0.56, Method: Composition-based stats.
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 13/95 (13%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQET-VLE 74
I + LD + LT++ E+ G+ Q ATV I + + P+F++ E + E
Sbjct: 1612 ITLAQKLDQANHAPHTLTVKAEDQGSPQWHDLATVIIHVYPSDRSAPIFSKSEYFVEIPE 1671
Query: 75 GEPIGSKVTQVNAI------------DKDGTFPNN 97
P+GS + V+A+ +KDG F N
Sbjct: 1672 SIPVGSPILLVSAMSPSEVTYELREGNKDGVFSMN 1706
Score = 32.7 bits (73), Expect = 0.76, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTER 67
LD E E+ L + V +NG L S + V + + DVND P+F+ +
Sbjct: 1200 LDRENKDEHILEVTVLDNGEPSLKSTSRVVVGILDVNDNPPIFSHK 1245
Score = 32.3 bits (72), Expect = 0.84, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Query: 14 ADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEI---PLFTEREQE 70
DI + P DY+ + +Y+L + + G L SE V + + + ++ + P + R E
Sbjct: 2123 GDISLKKPFDYQALNKYHLKVIARDGGTPSLQSEEEVLVTVRNKSNPLFQSPYYKVRVPE 2182
Query: 71 TVLEGEPI 78
+ PI
Sbjct: 2183 NITLYTPI 2190
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIP-LFTEREQETVLEGEPIGS 80
LD E +NL + + G + ++ T+H+ EDVND P F V + + +
Sbjct: 3073 LDRERKDVFNLVAKATDGGGRSCQADITLHV--EDVNDNAPRFFPSHCAVAVFDNTTVKT 3130
Query: 81 KVTQVNAIDKD 91
V V A D D
Sbjct: 3131 PVAVVFARDPD 3141
>sp|Q8BNA6|FAT3_MOUSE Protocadherin Fat 3 OS=Mus musculus GN=Fat3 PE=1 SV=2
Length = 4555
Score = 52.4 bits (124), Expect = 9e-07, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVL-E 74
+KV LD E + Y+L I+ ++G ++S TV+I + DVND P+FT V+ E
Sbjct: 3397 VKVKKKLDRERVSGYSLLIQAVDSGIPAMSSTTTVNIDISDVNDNSPVFTPANYTAVIQE 3456
Query: 75 GEPIGSKVTQVNAIDKD 91
+P+G+ + Q+ D+D
Sbjct: 3457 NKPVGTSILQLVVTDRD 3473
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 8/88 (9%)
Query: 16 IKVNHPLDYETIKEYNLTIRVEN--NGAQQLASEATVHIILEDVNDEIPLFTEREQETVL 73
+KV PLDYE Y LT+R + GA+ +E TV ++++D+ND P+F + T L
Sbjct: 2239 LKVISPLDYEVTSVYKLTVRASDALTGAR---AEVTVDLLVDDINDNPPVFDQPTYNTTL 2295
Query: 74 -EGEPIGSKVTQVNAIDKDGTFPNNQLL 100
E IG+ V Q+ + D D NN+L+
Sbjct: 2296 SESSLIGTPVLQLVSTDADSG--NNKLV 2321
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILE--DVNDEIPLFTEREQETVLEGEP-I 78
LD+E I ++ + V ++G QL +E+ V + +E DVND P+FT+ ETVL I
Sbjct: 1838 LDHEAIAHFHFHVHVRDSGNPQLTAESPVEVNIEVTDVNDNPPVFTQAVFETVLLLPTYI 1897
Query: 79 GSKVTQVNAIDKDGTFP 95
G +V +V+A D D P
Sbjct: 1898 GVEVLKVSATDPDSEVP 1914
Score = 47.0 bits (110), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNG-AQQLASEATVHIILEDVNDEIPLFTEREQ-ETVL 73
I + PLD E YN+++R + Q L+S A+V I + D+ND P+F R+ TV
Sbjct: 3186 IVLEQPLDREQQSSYNISVRATDQSPGQSLSSLASVTITVLDINDNPPVFERRDYLVTVP 3245
Query: 74 EGEPIGSKVTQVNAIDKD 91
E +G++V V A KD
Sbjct: 3246 EDTSLGTQVLSVFATSKD 3263
Score = 45.8 bits (107), Expect = 7e-05, Method: Composition-based stats.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVLEG 75
I V LDYET + + L + ++ G L++ ATV I L DVND P F++ V+
Sbjct: 3292 ISVLEALDYETCRRFYLVVEAKDGGTPALSTAATVSIDLTDVNDNPPRFSQDVYSAVISE 3351
Query: 76 EPI-GSKVTQVNAIDKDGTFPNNQL 99
+ + G V + A D D PN Q+
Sbjct: 3352 DALEGDSVILLIAEDVDSK-PNGQI 3375
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQET-VLEGEPIGS 80
LD+E ++ L + +NG L+SE V I + DVND P+F + E+ V E P G
Sbjct: 2351 LDHELVQHCTLKVTATDNGFPSLSSEVLVQIYISDVNDNPPVFNQLIYESYVSELAPRGH 2410
Query: 81 KVTQVNAIDKDGT 93
VT V A D D +
Sbjct: 2411 FVTCVQASDADSS 2423
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE-TVLE 74
+KV P+D E Y L I + + G Q +S + + +ED ND P+F + ++LE
Sbjct: 782 LKVLMPMDREHTDLYVLNITIYDLGKPQKSSWRLLTVNVEDANDNNPVFLQDSYSVSILE 841
Query: 75 GEPIGSKVTQVNAIDKD 91
IG+++ QV A DKD
Sbjct: 842 SSSIGTEIIQVEARDKD 858
Score = 42.4 bits (98), Expect = 8e-04, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTER-EQETVLEGEPIGS 80
LD ET Y LT+ + G L S V+I +EDVND PL +E V+E P
Sbjct: 1105 LDRETTASYWLTVYATDRGVVPLYSTIEVYIEVEDVNDNAPLTSEPIYYPVVMENSPKDV 1164
Query: 81 KVTQVNAIDKD 91
V Q+ A D D
Sbjct: 1165 SVIQIQAEDPD 1175
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE-TVLEGEPIGS 80
LD+E ++ L I V + + A V + +ED ND P FT E +V E +GS
Sbjct: 1523 LDHEAQDKHILNIMVRDQEFPYRRNLARVIVNVEDANDHSPYFTNPLYEASVFESAALGS 1582
Query: 81 KVTQVNAIDKD 91
V QV A+DKD
Sbjct: 1583 VVLQVTALDKD 1593
Score = 38.9 bits (89), Expect = 0.009, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 14 ADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQET-V 72
++K LD E + YNL R + G + +S +V ++LEDVND P+F+ V
Sbjct: 3082 GELKTLAVLDRERVPVYNLIARATDGGGRFCSS--SVLLLLEDVNDNPPVFSSNHYTACV 3139
Query: 73 LEGEPIGSKVTQVNAIDKD 91
E + +T+V A+D D
Sbjct: 3140 YENTATKALLTRVQAMDPD 3158
Score = 38.5 bits (88), Expect = 0.012, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 50 VHIILEDVNDEIPLFTEREQETV-LEGEPIGSKVTQVNAIDKD 91
V + + D+ND P+F ET+ +EG P+G+K+ QV AID D
Sbjct: 2799 VDVKVLDLNDNKPVFETSTYETIIMEGMPVGTKLAQVRAIDMD 2841
Score = 38.1 bits (87), Expect = 0.016, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 22 LDYETIKEYNLTI--RVENNGAQQLASEATVHIILEDVNDEIPLFTEREQET-VLEGEPI 78
LD E+ Y+L I R + QQL S T+ I L+DVND P F VLE P+
Sbjct: 891 LDRESKANYSLKIEARDKAESGQQLFSVVTLKIFLDDVNDCSPAFIPSSYSVKVLEDLPV 950
Query: 79 GSKVTQVNAIDKD 91
G+ + + D D
Sbjct: 951 GTVIAWLETQDPD 963
Score = 37.7 bits (86), Expect = 0.019, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 22 LDYETIKEYNLTIRVENNG-AQQLASEATVHIILEDVNDEIPLFT-EREQETVLEGEPIG 79
LD+ET ++ + + G A L+S A V + + D+ND P+F E + V E +P G
Sbjct: 2880 LDHETDPAFSFFVVASDLGEAFSLSSMALVSVKVTDINDNAPVFAHEVYRGNVKESDPPG 2939
Query: 80 SKVTQVNAIDKDGTFPNNQL 99
V ++ +DKD + N Q+
Sbjct: 2940 EVVAVLSTLDKDTSNINRQV 2959
Score = 37.4 bits (85), Expect = 0.028, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 16 IKVNHPLDYETIKE-YNLTIRVENNGAQ-QLASEATVHIILEDVNDEIPLFTEREQETVL 73
I LD+E+ E Y +R + G+ + SE V I + +VND PLF + + V+
Sbjct: 527 ISTTEELDFESSPETYRFIVRASDWGSPYRHESEVNVTIRVGNVNDNSPLFEKVACQGVI 586
Query: 74 EGE-PIGSKVTQVNAIDKD 91
+ P+G +T ++AID D
Sbjct: 587 SYDFPVGGHITAISAIDID 605
Score = 34.7 bits (78), Expect = 0.19, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVL-E 74
I LDYE Y L I+ N +AS AT+ + + D ND P+F + L E
Sbjct: 1722 ITTRRALDYEHTSSYQLIIQATNMAG--MASNATISVQIVDENDNPPVFLFSQYSGSLSE 1779
Query: 75 GEPIGSKVTQVN 86
PI S V ++
Sbjct: 1780 AAPINSIVRSLD 1791
Score = 33.1 bits (74), Expect = 0.57, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 46 SEATVHIILEDVNDEIPLFTEREQET-VLEGEPIGSKVTQVNAIDKD 91
++A V I +ED ND P F E ET V E +G+ V V+A DKD
Sbjct: 453 AKAQVTIGIEDANDHTPEFQEALYETFVNESVRVGTNVLTVSASDKD 499
Score = 30.4 bits (67), Expect = 3.1, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNG---AQQLASEATVHIILEDVNDEIPLFTERE-QET 71
I+++ LDYE + YNLT+R ++ G + S V ++ + N P F + +
Sbjct: 991 IRLSKELDYEKQQFYNLTVRAKDKGRPVSLSSVSFVEVEVVDVNENLHTPYFPDFAVVGS 1050
Query: 72 VLEGEPIGSKVTQVNAIDKD 91
V E IG+ V QV A D+D
Sbjct: 1051 VKENSRIGTSVLQVTAHDED 1070
>sp|Q6V0I7|FAT4_HUMAN Protocadherin Fat 4 OS=Homo sapiens GN=FAT4 PE=1 SV=2
Length = 4981
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 8 YLLFTWADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTER 67
+ L ++ V LD ET + + L I ++G+ L T+++I++DVND +P F +
Sbjct: 2308 FTLSASGELGVTQSLDRETKERFVLMITATDSGSPALTGTGTINVIVDDVNDNVPTFASK 2367
Query: 68 EQ-ETVLEGEPIGSKVTQVNAIDKDGT 93
T+ E P G+ V VNA D D +
Sbjct: 2368 AYFTTIPEDAPTGTDVLLVNASDADAS 2394
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 40/78 (51%)
Query: 14 ADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVL 73
+I+ PLD E + Y LTI+ + G+ ++ V I + D ND P F++ V
Sbjct: 2723 GEIRSVRPLDREKVSHYVLTIKSSDKGSPSQSTSVKVMINILDENDNAPRFSQIFSAHVP 2782
Query: 74 EGEPIGSKVTQVNAIDKD 91
E P+G VT+V D+D
Sbjct: 2783 ENSPLGYTVTRVTTSDED 2800
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 8/90 (8%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENN-------GAQQLASEATVHIILEDVNDEIPLFTERE 68
IKV LD E I YNLT+ V +N Q +S A++ I + D+ND P+F+++
Sbjct: 420 IKVASALDRERIPSYNLTVSVSDNYGAPPGAAVQARSSVASLVIFVNDINDHPPVFSQQV 479
Query: 69 QETVLEGE-PIGSKVTQVNAIDKDGTFPNN 97
L E P GS V+ ++A D D N
Sbjct: 480 YRVNLSEEAPPGSYVSGISATDGDSGLNAN 509
Score = 46.6 bits (109), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVLEG 75
I V LD ET+ YNL++ ++G A++ + LED+ND P+ T E E V+E
Sbjct: 3462 ITVTAELDRETLPIYNLSVLAVDSGTPSATGSASLLVTLEDINDNGPMLTVSEGE-VMEN 3520
Query: 76 EPIGSKVTQVNAIDKDGTFPNNQ 98
+ G+ V + + D D P NQ
Sbjct: 3521 KRPGTLVMTLQSTDPD--LPPNQ 3541
Score = 45.8 bits (107), Expect = 8e-05, Method: Composition-based stats.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVLEG 75
+ ++ PLD+E I++Y + I + G +S + I + DVND P+F E + +
Sbjct: 2621 VSISQPLDFEKIQKYVVWIEARDGGFPPFSSYEKLDITVLDVNDNAPIFKEDPFISEILE 2680
Query: 76 EPIGSKVTQVNAIDKDGTFPNNQL 99
K+ V+A+DKD + PN QL
Sbjct: 2681 NLSPRKILTVSAMDKD-SGPNGQL 2703
Score = 45.1 bits (105), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 21 PLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVL-EGEPIG 79
PLD Y + I + G QL+S + + + DVND P+F + E L E EP+
Sbjct: 954 PLDVHA-GSYQIEILASDMGVPQLSSSVILTVYVHDVNDNSPVFDQLSYEVTLSESEPVN 1012
Query: 80 SKVTQVNAIDKD 91
S+ +V A DKD
Sbjct: 1013 SRFFKVQASDKD 1024
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQET-VLEGEPIGS 80
LDYE + Y LT+R E+ G Q + V+ + DVND P+F+ T ++E P+GS
Sbjct: 1904 LDYEVQQYYILTVRAEDGGGQ--FTTIRVYFNILDVNDNPPIFSLNSYSTSLMENLPVGS 1961
Query: 81 KVTQVNAIDKDGTFPNNQL 99
V N D D N+QL
Sbjct: 1962 TVLVFNVTDADDGI-NSQL 1979
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Query: 10 LFTWADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQ 69
+F + + LD E Y L + + + L++ V +ILEDVND PLF
Sbjct: 1046 IFPDGQLYIKSELDRELQDRYVLMVVASDRAVEPLSATVNVTVILEDVNDNRPLFNSTNY 1105
Query: 70 ETVLEGEP-IGSKVTQVNAIDKD 91
E E GS V +V+A+DKD
Sbjct: 1106 TFYFEEEQRAGSFVGKVSAVDKD 1128
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLF-TEREQETVLEGEPIGS 80
LD E +Y L + VE+ G + V++ ++D+ND P+F + Q V E +GS
Sbjct: 208 LDREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVGS 267
Query: 81 KVTQVNAIDKD 91
V QV A D D
Sbjct: 268 SVLQVAAADAD 278
Score = 42.7 bits (99), Expect = 7e-04, Method: Composition-based stats.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 16 IKVNHPLDYETIKEYNLTIRVEN---NGAQQLASEATVHIILEDVNDEIPLFTEREQETV 72
+KV LD E+ YNL ++V + A + S A V IIL DVND P F + +
Sbjct: 2000 LKVLKALDRESQSFYNLVVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTFLSPKLTYI 2059
Query: 73 LEGEPIGSKVTQVNAIDKDGTFPNNQL 99
E PI + V + A D D + PN+ +
Sbjct: 2060 PENTPIDTVVFKAQATDPD-SGPNSYI 2085
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 6/90 (6%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTER------EQ 69
I V PLD+E ++Y+LT++ + G L A I L DVND P+ R
Sbjct: 305 ITVREPLDFEARRQYSLTVQAMDRGVPSLTGRAEALIQLLDVNDNDPVVKFRYFPATSRY 364
Query: 70 ETVLEGEPIGSKVTQVNAIDKDGTFPNNQL 99
+V E +G+ V + D D N +
Sbjct: 365 ASVDENAQVGTVVALLTVTDADSPAANGNI 394
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 4/79 (5%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVLEG 75
I V PLD E Y+LT++ + G+ +TV I+L D+ND +P+F E +V
Sbjct: 2211 ITVAKPLDREKTPTYHLTVQATDRGSTPRTDTSTVSIVLLDINDFVPVF-ELSPYSVNVP 2269
Query: 76 EPIGS---KVTQVNAIDKD 91
E +G+ + QV A D D
Sbjct: 2270 ENLGTLPRTILQVVARDDD 2288
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQ-ETVLEGEPIGS 80
LDYE +++ +TI + G +V + + DVND P+F + TVLE P G+
Sbjct: 3152 LDYELCQKHEMTISAIDGGWVARTGYCSVTVNVIDVNDNSPVFLSDDYFPTVLENAPSGT 3211
Query: 81 KVTQVNAIDKD 91
V +NA D D
Sbjct: 3212 TVIHLNATDAD 3222
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE-TVLEGEPIGS 80
LD+ET + Y+LT++ N ++ S ATV+I L+ N+ +P F + + E P G+
Sbjct: 3256 LDFETKQSYHLTVKAFNVPDEERCSFATVNIQLKGTNEYVPRFVSKLYYFEISEAAPKGT 3315
Query: 81 KVTQVNAIDKD 91
V +V A D+D
Sbjct: 3316 IVGEVFASDRD 3326
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQET-VLEGEPIGS 80
LDYE Y+L I+ ++G L S T++I + D ND P F + VLE IG
Sbjct: 1273 LDYEATPAYSLVIQAVDSGTIPLNSTCTLNIDILDENDNTPSFPKSTLFVDVLENMRIGE 1332
Query: 81 KVTQVNAIDKD 91
V+ V A D D
Sbjct: 1333 LVSSVTATDSD 1343
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQ-ETVLEGEPIGS 80
LD+ET Y L I ++ G +S +V I + D ND P F + ++++E PIG+
Sbjct: 1378 LDFETQSLYKLNITAKDQGRPPRSSTMSVVIHVRDFNDNPPSFPPGDIFKSIVENIPIGT 1437
Query: 81 KVTQVNAIDKDGTFPNNQL 99
V V A D D N QL
Sbjct: 1438 SVISVTAHDPDADI-NGQL 1455
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 14 ADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQET-V 72
++++ LD E + Y LT+ + G L+S V +++ D+ND P+F + + +
Sbjct: 2104 GEVRLTGELDREEVSNYTLTVVATDKGQPSLSSSTEVVVMVLDINDNNPIFAQALYKVEI 2163
Query: 73 LEGEPIGSKVTQVNAIDKD 91
E G+ + QV A D D
Sbjct: 2164 NENTLTGTDIIQVFAADGD 2182
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTERE--QETVLEGEPIG 79
LD E + L I + G S A + + L DVNDE P+F++ E +V+E P G
Sbjct: 540 LDRELASQIVLNISARDQGVHPKVSYAQLVVTLLDVNDEKPVFSQPEGYDVSVVENAPTG 599
Query: 80 SKVTQVNAIDKD 91
+++ + A D D
Sbjct: 600 TELLMLRATDGD 611
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE-TVLE 74
I V L + + + +T+ ++ G L+S+ATVHI + + N P F++ T+ E
Sbjct: 3041 ISVASSLISDLNQNFFITVTAKDKGNPPLSSQATVHITVTEENYHTPEFSQSHMSATIPE 3100
Query: 75 GEPIGSKVTQVNAIDKDG 92
IGS V V+A D+D
Sbjct: 3101 SHSIGSIVRTVSARDRDA 3118
Score = 37.7 bits (86), Expect = 0.021, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQ-ETVLEGEPIGS 80
LD E Y+L + + G+ +S A +++ L D+ND P+F + + E EP GS
Sbjct: 647 LDREEQAFYSLLVLATDLGSPPQSSMARINVSLLDINDNSPVFYPVQYFAHIKENEPGGS 706
Query: 81 KVTQVNAIDKD 91
+T V+A D D
Sbjct: 707 YITTVSATDPD 717
Score = 37.7 bits (86), Expect = 0.022, Method: Composition-based stats.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Query: 14 ADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE-TV 72
DI ++ PL+ E Y + + ++G V I + D+ND P F+
Sbjct: 2825 GDIVISRPLNREDTDRYRIRVSAHDSG---WTVSTDVTIFVTDINDNAPRFSRTSYYLDC 2881
Query: 73 LEGEPIGSKVTQVNAIDKD 91
E IGSKVTQV A D D
Sbjct: 2882 PELTEIGSKVTQVFATDPD 2900
Score = 37.0 bits (84), Expect = 0.038, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 30 YNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVL-EGEPIGSKVTQVNAI 88
YNL + + G ++ S + IIL+ ++ P+FT+ + T+L EGEPIG+ V + A
Sbjct: 1597 YNLIVSATDLGPERRKSTTELTIILQGLDG--PVFTQPKYITILKEGEPIGTNVISIEAA 1654
Query: 89 DKDGT 93
G+
Sbjct: 1655 SPRGS 1659
Score = 36.2 bits (82), Expect = 0.066, Method: Composition-based stats.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLAS--EATVHIILEDVNDEIPLFTEREQET-V 72
I V+ LD E + +L + +N G+ + A E TV++ + D ND P+FT +
Sbjct: 3355 IYVSGILDREKEERVSLKVLAKNFGSIRGADIDEVTVNVTVLDANDP-PIFTLNIYSVQI 3413
Query: 73 LEGEPIGSKVTQVNAIDKD 91
EG PIG+ VT V+A D D
Sbjct: 3414 SEGVPIGTHVTFVSAFDSD 3432
Score = 35.8 bits (81), Expect = 0.086, Method: Composition-based stats.
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 14 ADIKVNHPLDYETIKE------YNLTIRVENNG-AQQLASEATVHIILEDVNDEIPLF-T 65
+I H D E++ ++ T+ + G Q L +ATVH+ ++D+ND P F
Sbjct: 1153 GEITNTHQFDRESLMRRRGTAVFSFTVIATDQGIPQPLKDQATVHVYMKDINDNAPKFLK 1212
Query: 66 EREQETVLEGEPIGSKVTQVNAIDKD 91
+ Q T+ E ++V +V+A D D
Sbjct: 1213 DFYQATISESAANLTQVLRVSASDVD 1238
Score = 35.4 bits (80), Expect = 0.10, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 36 VENNGAQQLASEATVHIILEDVNDEIPLF-TEREQETVLEGEPIGSKVTQVNAIDKD 91
+E + A A V I L+D+ND P+F T+ TV E GSK+ Q+ A+D D
Sbjct: 1712 IEKSTAFPRTQRAEVEITLQDINDNPPVFPTDMLDLTVEENIGDGSKIMQLTAMDAD 1768
Score = 33.9 bits (76), Expect = 0.31, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 27 IKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQET-VLEGEPIGSKVTQV 85
I ++ + + G L SE TV I + D ND P F + + T V + +G+K+ +V
Sbjct: 2946 INRHSFIVTSSDRGKPSLISETTVTINIVDSNDNAPQFLKSKYFTPVTKNVKVGTKLIRV 3005
Query: 86 NAID 89
AID
Sbjct: 3006 TAID 3009
Score = 33.5 bits (75), Expect = 0.42, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 29/52 (55%)
Query: 8 YLLFTWADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVND 59
+ L T + +D E I ++ L++ +++G Q++S TVHI + D ND
Sbjct: 3558 FSLSTAGVLSTTREIDREQIADFYLSVVTKDSGVPQMSSTGTVHITVIDQND 3609
Score = 32.3 bits (72), Expect = 0.88, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 22 LDYETIKEYNLTIRVENNGAQQ-LASEATVHIILEDVNDEIPLFTEREQETVLEGEPI-G 79
LD ET Y L + + G+ + L+S +V + + DVND P F T + + G
Sbjct: 2423 LDRETKDNYTLVVVCSDAGSPEPLSSSTSVLVTVTDVNDNPPRFQHHPYVTHIPSPTLPG 2482
Query: 80 SKVTQVNAIDKDGTFPNNQL 99
S V V D D PN++L
Sbjct: 2483 SFVFAVTVTDAD-IGPNSEL 2501
Score = 31.2 bits (69), Expect = 1.8, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGA---QQLASEATVHIILEDVNDEIPLFTEREQETV 72
I N +D E + LT++ + + + V I++ D+ND +P+F +
Sbjct: 1478 IYTNAEIDREFANLFELTVKANDQAVPIETRRYALKNVTILVTDLNDNVPMFISQNALAA 1537
Query: 73 LEGEPIGSKVTQVNAIDKD 91
IGS +T + A D D
Sbjct: 1538 DPSAVIGSVLTTIMAADPD 1556
Score = 30.4 bits (67), Expect = 3.2, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 14 ADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVL 73
D+ LD E +Y+L +R ++ G Q +S+ ++I + DVND P F+ +
Sbjct: 1794 GDLIATRRLDRERRSKYSLLVRADD-GLQ--SSDMRINITVSDVNDHTPKFSRPVYSFDI 1850
Query: 74 EGEPI-GSKVTQVNAIDKD 91
+ I GS V + A D D
Sbjct: 1851 PEDTIPGSLVAAILATDDD 1869
Score = 30.4 bits (67), Expect = 3.7, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE-TVLE 74
I LD E Y L I + G Q ++A V I + D D P+F++ V E
Sbjct: 745 ISTRMALDREEKTAYQLQIVATDGGNLQSPNQAIVTITVLDTQDNPPVFSQVAYSFVVFE 804
Query: 75 GEPIGSKVTQVNAIDKD 91
+G V V+A D
Sbjct: 805 NVALGYHVGSVSASTMD 821
>sp|Q9VW71|FAT2_DROME Fat-like cadherin-related tumor suppressor homolog OS=Drosophila
melanogaster GN=kug PE=2 SV=2
Length = 4705
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 12 TWADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQ-E 70
T +++N PLD E Y L I ++ G+ L+SEA V+++++DVND P+F +E
Sbjct: 925 TTGCLRLNKPLDREKQDNYALHITAKDGGSPVLSSEALVYVLVDDVNDNAPVFGVQEYIF 984
Query: 71 TVLEGEPIGSKVTQVNAIDKD 91
V E P G+ + + A+D+D
Sbjct: 985 KVREDLPRGTVLAVIEAVDED 1005
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQET-VLE 74
I+++ LD ETI +NLT++ E+ G +L S ATV + + D+ND P F+ R+ +LE
Sbjct: 3241 IRLHKSLDRETISLFNLTVKAEDCGVPKLHSIATVAVNILDINDNPPEFSMRQYSCKILE 3300
Query: 75 GEPIGSKVTQVNAIDKD 91
G++V +V A D
Sbjct: 3301 NATHGTEVCKVYATSID 3317
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVL-E 74
I +N +DYE+IK +NLT++ N A+ +HI+ D ND IP F + E L E
Sbjct: 1766 IVINGNIDYESIKVFNLTVKGTNMAAESSCQNIIIHIL--DANDNIPYFVQNEYVGALPE 1823
Query: 75 GEPIGSKVTQVNAIDKD 91
IGS V +V+ KD
Sbjct: 1824 SAAIGSYVLKVHDSSKD 1840
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 12 TWADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTER-EQE 70
T D+ +N LDYE K Y LTI+ + G L++ A V+I + D+ND P F + +
Sbjct: 3342 TTGDLVLNATLDYEMSKFYFLTIQAIDGGTPPLSNNAYVNISILDINDNSPTFLQNLYRI 3401
Query: 71 TVLEGEPIGSKVTQVNAIDKDG 92
V E +GSK+ V A D+D
Sbjct: 3402 NVNEDIFVGSKILDVKATDEDS 3423
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 14 ADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTER-EQETV 72
++ V LD+E ++ L + V++ GA + A + + + D ND P FT + Q V
Sbjct: 1559 GNVIVTQRLDFEKTAQHILIVFVKDQGAPGKRNYAKIIVNVHDHNDHHPEFTAKIIQSKV 1618
Query: 73 LEGEPIGSKVTQVNAIDKDG 92
E IGSK+ +V AID+D
Sbjct: 1619 PESAAIGSKLAEVRAIDRDS 1638
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 31/59 (52%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVLE 74
I V+ PLD ETI Y L I+ + G Q + ++I + D ND P+F+ VL+
Sbjct: 3451 ISVSRPLDRETISHYTLEIQACDQGDPQRCNSVPININILDTNDNAPIFSSSNYSVVLQ 3509
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNG--AQQLASEATVHIILEDVNDEIPLFTEREQE-TV 72
+KV LD ET +Y L V++ Q+ SE + I + D+ND +P+F+ + +V
Sbjct: 3137 LKVASALDRETTPKYKLVAHVQDGKDFTQECFSE--IIITVNDINDNMPIFSMAQYRVSV 3194
Query: 73 LEGEPIGSKVTQVNAIDKD 91
E + + +T+V+A+DKD
Sbjct: 3195 PEDAQLNTLITKVHAMDKD 3213
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 48/106 (45%), Gaps = 20/106 (18%)
Query: 6 LCYLLFTWADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHII------------ 53
L Y+ T ++ + PLDYE IK +++ + V+++G+ L+S + V I
Sbjct: 2388 LFYIDVTDGNLYLKTPLDYEQIKYHHIVVNVKDHGSPSLSSRSNVFITGRILCRFISYKL 2447
Query: 54 -------LEDVNDEIPLFTEREQETVLEGEPI-GSKVTQVNAIDKD 91
++D+ND P F E T + + G V A DKD
Sbjct: 2448 IYDSIIPVKDLNDNAPCFVEPSYFTKVSVAAVRGQFVALPKAYDKD 2493
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 12 TWADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILE--DVNDEIPLFTEREQ 69
T I++ LDYET Y + V + G +L S T H+ + +VND P+F ERE
Sbjct: 1875 TTGAIELLRQLDYETNAGYTFDVTVSDMGKPKLHSTTTAHVTIRVINVNDCPPVFNEREL 1934
Query: 70 ETVL 73
L
Sbjct: 1935 NVTL 1938
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 16 IKVNHPLDYETIKE-YNLTIRVENNG-AQQLASEATVHIILEDVNDEIPLFTEREQ--ET 71
+K LD+ET+K Y L IR + G + +E + I+++D+ND P F ER
Sbjct: 560 VKTTSLLDFETMKRNYELIIRASDWGLPYRRQTEIKLSIVVKDINDNRPQF-ERVNCYGK 618
Query: 72 VLEGEPIGSKVTQVNAIDKDG 92
V + P+G++V +AID D
Sbjct: 619 VTKSAPMGTEVFVTSAIDFDA 639
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQET-VLEGEPIGS 80
LD E E+ L + + +NG+ L+S + + + + D+ND P F +R + V +
Sbjct: 1254 LDRENQAEHILEVAISDNGSPVLSSTSRIVVSVLDINDNSPEFDQRVYKVQVPSSATVNQ 1313
Query: 81 KVTQVNAIDKDG 92
+ QV+AID D
Sbjct: 1314 SIFQVHAIDSDS 1325
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Query: 12 TWADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLF-TEREQE 70
T+ I + L+ I+EY L ++ + G L+S+ VHII+ ++ P F T
Sbjct: 1662 TFGIITLAGNLNINKIQEYMLQVKAVDLGNPPLSSQIPVHIIVTMSENDPPKFPTNNIAI 1721
Query: 71 TVLEGEPIGSKVTQVNAIDKDGTFPN 96
+ E PIG+ VTQV A F N
Sbjct: 1722 EIFENLPIGTFVTQVTARSSSSIFFN 1747
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 11 FTWADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIP-LFTEREQ 69
+ I V + LDYE I ++++IR + + +E + + + DVND P + ++
Sbjct: 2286 YNTGSIFVVNELDYEKISSHDVSIRA-TDSLSGVYAEVVLSVSIMDVNDCYPEIESDIYN 2344
Query: 70 ETVLEGEPIGSKVTQVNAIDKDG 92
T+ E G+++ ++NA D D
Sbjct: 2345 LTIPENASFGTQILKINATDNDS 2367
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDE--IPLFTEREQE-TV 72
I+ LDYE + +NL + + G L S+ ++ I++ DVN+ P F + E V
Sbjct: 1035 IRTQGYLDYENKQVHNLIVSAIDGGDPSLTSDMSIVIMIIDVNENRFAPEFDDFVYEGKV 1094
Query: 73 LEGEPIGSKVTQVNAIDKD 91
E +P G+ V V A D D
Sbjct: 1095 KENKPKGTFVMNVTARDMD 1113
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 22 LDYETIKEYNLTIRV--ENNGAQQLASEATVHIILEDVNDEIPLFTEREQE-TVLEGEPI 78
LD E Y LT+ + N + S A V I ++D+ND P+F + ++ E
Sbjct: 460 LDAEKKSSYTLTVSAIDQANVGSRKQSSAKVKISVQDMNDNDPIFENVNKVISINENNLA 519
Query: 79 GSKVTQVNAIDKDG 92
GS V ++ A D+D
Sbjct: 520 GSFVVKLTAKDRDS 533
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Query: 14 ADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQET-V 72
+I ++ LDYET + YNLTI V +G + V +I D+ND P F + +
Sbjct: 1456 GNILLSKYLDYETQQSYNLTISV-TDGTFTAFTNLLVQVI--DINDNPPQFAKDVYHVNI 1512
Query: 73 LEGEPIGSKVTQVNAIDKD 91
E S + Q++A D+D
Sbjct: 1513 SENIEEESVIMQLHATDRD 1531
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLF 64
LD E EYN + +NG + ++ V I + D ND P+F
Sbjct: 2941 LDREVQSEYNFKVIAADNGHPKHDAKVPVTIKIVDYNDNAPVF 2983
>sp|Q6X862|PC11X_GORGO Protocadherin-11 X-linked OS=Gorilla gorilla gorilla GN=PCDH11X
PE=3 SV=1
Length = 1347
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE-TVLEGEPIGS 80
LD E Y + ++VE+ G Q +S A + + + D ND P+F E E E ++ E P+G+
Sbjct: 207 LDREKKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGT 266
Query: 81 KVTQVNAIDKD 91
VTQ++A D D
Sbjct: 267 SVTQLHATDAD 277
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTER-EQETVLEGEPIGS 80
LDYE+ KEY + + + G L A + I ++D ND P+FT+ ++ E G
Sbjct: 424 LDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGI 483
Query: 81 KVTQVNAIDKDGTFPNNQL 99
++T+V+A D D + PN ++
Sbjct: 484 QLTKVSATDAD-SGPNAEI 501
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLF----TEREQET 71
I+ N D E + Y ++ E+ G +S A V I + DVND P+F + E
Sbjct: 625 IRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNYSYEL 684
Query: 72 VLEGEPIGSKVTQVNAIDKD 91
VL G+ V QV A+D D
Sbjct: 685 VLPSTNPGTVVFQVIAVDND 704
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTERE 68
LD E +Y TI ++NG L S TV + + D ND P+FT E
Sbjct: 528 LDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNE 574
>sp|Q5DRA9|PCDGE_PANTR Protocadherin gamma-B2 OS=Pan troglodytes GN=PCDHGB2 PE=3 SV=1
Length = 931
Score = 51.6 bits (122), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/79 (39%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQET-VLEGEPIGS 80
LD E I EYNLTI + G L+S V + + DVND P+F + V E P G+
Sbjct: 410 LDREEIPEYNLTITATDGGKPPLSSSIIVTLHISDVNDNAPVFQQTSYMVHVAENNPPGA 469
Query: 81 KVTQVNAIDKDGTFPNNQL 99
+ Q++A D D PN Q+
Sbjct: 470 SIAQISASDPD-LGPNGQV 487
Score = 33.9 bits (76), Expect = 0.33, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 13 WADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETV 72
+ ++ + H LD E + L + + G + + + + D ND P+F++
Sbjct: 191 YPELILQHSLDREEHSLHQLVLTAVDGGDPPQSGTTQIRVKVTDANDNPPVFSQDVYRVT 250
Query: 73 L-EGEPIGSKVTQVNAIDKD 91
L E P G V QV A D+D
Sbjct: 251 LREDVPPGFFVLQVTATDRD 270
Score = 32.3 bits (72), Expect = 0.95, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 26/41 (63%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIP 62
D+E ++ + LT++ + G+ L++ ++ +++ D+ND P
Sbjct: 520 FDHEQLRAFELTLQARDQGSPALSANVSLRVLVGDLNDNAP 560
>sp|Q96TA0|PCDBI_HUMAN Putative protocadherin beta-18 OS=Homo sapiens GN=PCDHB18 PE=5 SV=1
Length = 734
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 20 HPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQET-VLEGEPI 78
HPLD E EYN+TI V + G +L +E + +++ DVND P+FT+ V E
Sbjct: 354 HPLDREVRNEYNITITVTDLGTPRLKTEHNITVLVSDVNDNAPIFTQTSYTLFVRENNSP 413
Query: 79 GSKVTQVNAIDKD 91
+ V+A D+D
Sbjct: 414 ALHIGSVSATDRD 426
Score = 38.5 bits (88), Expect = 0.013, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 7/77 (9%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQ-------ETVLE 74
LDYE ++E+ + ++G+ L+SE V +++ D ND P Q E V
Sbjct: 466 LDYEALQEFGFRVGAADHGSPALSSEVLVRVLVLDANDNSPFVLYPLQNGSAPCTELVPR 525
Query: 75 GEPIGSKVTQVNAIDKD 91
G VT+V A+D D
Sbjct: 526 AAEPGYLVTKVVAVDGD 542
>sp|Q9BZA7|PC11X_HUMAN Protocadherin-11 X-linked OS=Homo sapiens GN=PCDH11X PE=2 SV=1
Length = 1347
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE-TVLEGEPIGS 80
LD E Y + ++VE+ G Q +S A + + + D ND P+F E E E ++ E P+G+
Sbjct: 207 LDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGT 266
Query: 81 KVTQVNAIDKD 91
VTQ++A D D
Sbjct: 267 SVTQLHATDAD 277
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTER-EQETVLEGEPIGS 80
LDYE+ KEY + + + G L A + I ++D ND P+FT+ ++ E G
Sbjct: 424 LDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGI 483
Query: 81 KVTQVNAIDKDGTFPNNQL 99
++T+V+A+D D + PN ++
Sbjct: 484 QLTKVSAMDAD-SGPNAKI 501
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLF----TEREQET 71
I+ N D E + Y ++ E+ G +S A V I + DVND P+F + E
Sbjct: 625 IRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNCSYEL 684
Query: 72 VLEGEPIGSKVTQVNAIDKD 91
VL G+ V QV A+D D
Sbjct: 685 VLPSTNPGTVVFQVIAVDND 704
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTERE 68
LD E +Y TI ++NG L S TV + + D ND P+FT E
Sbjct: 528 LDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNE 574
>sp|Q9BZA8|PC11Y_HUMAN Protocadherin-11 Y-linked OS=Homo sapiens GN=PCDH11Y PE=1 SV=1
Length = 1340
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE-TVLEGEPIGS 80
LD E Y + ++VE+ G Q +S A + + + D ND P+F E E E ++ E P+G+
Sbjct: 239 LDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGT 298
Query: 81 KVTQVNAIDKD 91
VTQ++A D D
Sbjct: 299 SVTQLHATDAD 309
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTER-EQETVLEGEPIGS 80
LDYE+ KEY + + + G L A + I ++D ND P+FT+ ++ E G
Sbjct: 456 LDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGI 515
Query: 81 KVTQVNAIDKDGTFPNNQL 99
++ +V+A D D + PN ++
Sbjct: 516 QLMKVSATDAD-SGPNAEI 533
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFT----EREQET 71
I+ N D E + Y ++ E+ G +S A V I + DVND P+F E
Sbjct: 657 IRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPYNYSYEL 716
Query: 72 VLEGEPIGSKVTQVNAIDKD 91
VL G+ V QV A+D D
Sbjct: 717 VLPSTNPGTVVFQVIAVDND 736
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE-TVLEGEPIGS 80
LD E +Y TI ++NG L S TV + + D ND P+FT E + V E P
Sbjct: 560 LDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNEYKFYVPENLPRHG 619
Query: 81 KVTQVNAIDKD 91
V + D D
Sbjct: 620 TVGLITVTDPD 630
>sp|Q71M42|PC11X_PANTR Protocadherin-11 X-linked OS=Pan troglodytes GN=PCDH11X PE=3 SV=1
Length = 1347
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE-TVLEGEPIGS 80
LD E Y + ++VE+ G Q +S A + + + D ND P+F E E E ++ E P+G+
Sbjct: 207 LDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGT 266
Query: 81 KVTQVNAIDKD 91
VTQ++A D D
Sbjct: 267 SVTQLHATDAD 277
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTER-EQETVLEGEPIGS 80
LDYE+ KEY + + + G L A + I ++D ND P+FT+ ++ E G
Sbjct: 424 LDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGI 483
Query: 81 KVTQVNAIDKDGTFPNNQL 99
++T+V+A D D + PN ++
Sbjct: 484 QLTKVSATDAD-SGPNAEI 501
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLF----TEREQET 71
I+ N D E + Y ++ E+ G +S A V I + DVND P+F + E
Sbjct: 625 IRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNYSYEL 684
Query: 72 VLEGEPIGSKVTQVNAIDKD 91
VL G+ V QV A+D D
Sbjct: 685 VLPSTNPGTVVFQVMAVDND 704
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTERE 68
LD E +Y TI ++NG L S TV + + D ND P+FT E
Sbjct: 528 LDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNE 574
>sp|Q6WYY1|PC11X_PANPA Protocadherin-11 X-linked OS=Pan paniscus GN=PCDH11X PE=3 SV=1
Length = 1347
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE-TVLEGEPIGS 80
LD E Y + ++VE+ G Q +S A + + + D ND P+F E E E ++ E P+G+
Sbjct: 207 LDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGT 266
Query: 81 KVTQVNAIDKD 91
VTQ++A D D
Sbjct: 267 SVTQLHATDAD 277
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTER-EQETVLEGEPIGS 80
LDYE+ KEY + + + G L A + I ++D ND P+FT+ ++ E G
Sbjct: 424 LDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGI 483
Query: 81 KVTQVNAIDKDGTFPNNQL 99
++T+V+A D D + PN ++
Sbjct: 484 QLTKVSATDAD-SGPNAEI 501
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLF----TEREQET 71
I+ N D E + Y ++ E+ G +S A V I + DVND P+F + E
Sbjct: 625 IRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNYSYEL 684
Query: 72 VLEGEPIGSKVTQVNAIDKD 91
VL G+ V QV A+D D
Sbjct: 685 VLPSTNPGTVVFQVMAVDND 704
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTERE 68
LD E +Y TI ++NG L S TV + + D ND P+FT E
Sbjct: 528 LDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNE 574
>sp|Q6WXV7|PC11X_PONPY Protocadherin-11 X-linked OS=Pongo pygmaeus GN=PCDH11X PE=3 SV=1
Length = 1347
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE-TVLEGEPIGS 80
LD E Y + ++VE+ G Q +S A + + + D ND P+F E E E ++ E P+G+
Sbjct: 207 LDREEKDTYVMKVKVEDGGFPQRSSTAILQVSVTDTNDNHPVFKETEIEVSIPENAPVGT 266
Query: 81 KVTQVNAIDKD 91
VTQ++A D D
Sbjct: 267 SVTQLHATDAD 277
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTER-EQETVLEGEPIGS 80
LDYE+ KEY + + + G L A + I ++D ND P+FT+ ++ E G
Sbjct: 424 LDYESTKEYAIKLLAADAGKPPLNQSAMLFIKVKDENDNAPVFTQSFVTVSIPENNSPGI 483
Query: 81 KVTQVNAIDKDGTFPNNQL 99
++T+V+A D D + PN ++
Sbjct: 484 QLTKVSATDAD-SGPNAEI 501
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLF----TEREQET 71
I+ N D E + Y ++ E+ G +S A V I + DVND P+F + E
Sbjct: 625 IRPNISFDREKQESYTFYVKAEDGGRVSRSSSAKVTINVVDVNDNKPVFIVPPSNYSYEL 684
Query: 72 VLEGEPIGSKVTQVNAIDKD 91
VL G+ V QV A+D D
Sbjct: 685 VLPSTNPGTVVFQVIAVDND 704
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTERE 68
LD E +Y TI ++NG L S TV + + D ND P+FT E
Sbjct: 528 LDREKEDKYLFTILAKDNGVPPLTSNVTVFVSIIDQNDNSPVFTHNE 574
>sp|Q5F226|FAT2_MOUSE Protocadherin Fat 2 OS=Mus musculus GN=Fat2 PE=2 SV=1
Length = 4351
Score = 50.8 bits (120), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQET-VLE 74
+ V PLDYE+ ++ T+R + SEATV +++ED+ND P F++ T V E
Sbjct: 2225 LTVTGPLDYESKNKHVFTVRATDTALGSF-SEATVEVLVEDINDNPPTFSQLVYSTSVSE 2283
Query: 75 GEPIGSKVTQVNAIDKD 91
G P + V Q+ A D+D
Sbjct: 2284 GSPAQTPVIQLLASDQD 2300
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQET-VLE 74
++V LD+E Y+L IR ++G L + V + + DVND P F + T V E
Sbjct: 3380 LQVAKALDWEQTPSYSLRIRATDSGQPPLHEDTEVAVEVVDVNDNPPRFFQLNYSTAVQE 3439
Query: 75 GEPIGSKVTQVNAIDKDGTFPNN 97
PIG KV Q+ D D P N
Sbjct: 3440 NSPIGIKVLQLILDDPDS--PQN 3460
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVLE-GEPIGS 80
D E + + + V +N + ++A V + +EDVND IP F TV++ G G
Sbjct: 2028 FDREQQDTHEVAVEVRDNRVPRRVAQALVRVSVEDVNDNIPEFQHLPYYTVIQDGTEPGD 2087
Query: 81 KVTQVNAIDKD 91
+ QV+A DKD
Sbjct: 2088 VLFQVSATDKD 2098
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 21 PLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTERE-QETVLEGEPIG 79
PLD E Y LT+ + G+ L++ V+I + D+ND IP + +V E P+G
Sbjct: 1094 PLDREFTPYYWLTVLAVDRGSVPLSAVTEVYIEVTDINDNIPSMSRPVFYPSVKEDAPLG 1153
Query: 80 SKVTQVNAIDKD 91
+ V Q+ A D D
Sbjct: 1154 TSVLQLEAWDPD 1165
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 16 IKVNHPLDYETIKEYNLTIRVE-NNGAQQLASEATVHIILEDVNDEIPLFTEREQETVL- 73
+KV +D+E+ K Y + + + L S +V+I +EDVND P+F + L
Sbjct: 2750 LKVKKAMDHESTKWYQIDLMAHCPHEDTDLVSLVSVNIQVEDVNDNRPVFEADPYKAFLT 2809
Query: 74 EGEPIGSKVTQVNAIDKD 91
E P G+ V QV A D+D
Sbjct: 2810 ENMPGGTTVIQVTANDQD 2827
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE-TVLEGEPIGS 80
LDYE + + + +R + G L E V + + D+ND P F E + E V E G
Sbjct: 2337 LDYEAHQHFRVKVRATDRGDPPLTGETLVVVNVSDINDNPPEFREPQYEANVSELATCGH 2396
Query: 81 KVTQVNAIDKD 91
V +V A+D D
Sbjct: 2397 LVLKVQALDPD 2407
Score = 37.7 bits (86), Expect = 0.022, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 16 IKVNHPLDYETIKE-YNLTIRVENNGAQ-QLASEATVHIILEDVNDEIPLFTEREQETVL 73
I +DYE +K Y +R + G+ + E +V + L+++ND P+F E L
Sbjct: 514 ISTTKSMDYELMKRIYTFRVRASDWGSPFRQEKEVSVSLRLKNLNDNQPMFEEVNCTVSL 573
Query: 74 -EGEPIGSKVTQVNAIDKD 91
+ P+G + V+AID D
Sbjct: 574 RQDAPVGKSIMAVSAIDMD 592
Score = 37.0 bits (84), Expect = 0.036, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTER-------EQETVLE 74
LD E EY L + V++NG L S + V + + DVND P+F+ + E+ + L
Sbjct: 1200 LDRENKDEYVLEVTVQDNGDPPLRSTSRVVVCVLDVNDNSPMFSHKLFNVRLSERLSPLS 1259
Query: 75 GEPI 78
EP+
Sbjct: 1260 PEPV 1263
Score = 37.0 bits (84), Expect = 0.039, Method: Composition-based stats.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILE--DVNDEIPLFTEREQETVL 73
+ + LDYET + +I V + G L + + +I+ DVND P F+E+ E +
Sbjct: 1822 LTITSELDYETTPLFQFSIYVHDQGTPILFAPRSARVIIHVRDVNDSPPRFSEQIYEVAV 1881
Query: 74 EGEPI--GSKVTQVNAIDKD 91
EPI G ++ V A D D
Sbjct: 1882 V-EPIHPGMELLTVQAEDND 1900
Score = 36.6 bits (83), Expect = 0.044, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 18 VNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFT-EREQETVLEGE 76
VN LD+ET +Y L+I + L+ T+ I + DVN+ P FT + VLE
Sbjct: 3277 VNGSLDFETNPKYFLSIECSRKSSSSLSDVTTIVINVTDVNEHHPRFTHDLYTVRVLENA 3336
Query: 77 PIGSKVTQVNAIDKDG 92
+G + V+A D DG
Sbjct: 3337 IVGDVILTVSASDDDG 3352
Score = 36.2 bits (82), Expect = 0.055, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIP-LFTEREQETVLEGEPIGS 80
LD E YNL + + G Q +E T+HI EDVND P F V + + +
Sbjct: 3075 LDRERKDVYNLVAKATDGGGQSCQAEVTLHI--EDVNDNAPRFFPSHCAVAVFDNTTVKT 3132
Query: 81 KVTQVNAIDKD 91
V V A D D
Sbjct: 3133 PVAVVFARDPD 3143
Score = 35.4 bits (80), Expect = 0.10, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 22 LDYETIKEYNLTIRVENNGAQ-QLASEATVHIILEDVNDEIPLF-TEREQETVLEGEPIG 79
LD ET + Y + ++G QL+S+A V + + D ND P F +E + +V+E G
Sbjct: 2865 LDCETQQTYRFYVVAFDHGQTIQLSSQALVEVSITDENDNPPRFASEDYRGSVVENNEPG 2924
Query: 80 SKVTQVNAIDKDGTFPNNQL 99
V + +D D + N Q+
Sbjct: 2925 ELVATLKTLDADISEQNRQV 2944
Score = 35.4 bits (80), Expect = 0.12, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 14 ADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLF 64
DI + P DY+ + +Y+L + + G L +E VH+ + N PLF
Sbjct: 2123 GDISLKKPFDYQALNKYHLRVTARDAGTPPLQTEVEVHVTVR--NKSNPLF 2171
Score = 34.7 bits (78), Expect = 0.16, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 14 ADIKVNHPLDYETIKEYNLTI--RVENNGAQQLASEATVHIILEDVNDEIP-LFTEREQE 70
++ V LD E+ +Y L R + QL S V + LED+ND P TE
Sbjct: 873 GELVVTGQLDRESEPQYILKAEARDQPTKGHQLFSVTDVIVTLEDINDNPPQCITEHSSL 932
Query: 71 TVLEGEPIGSKVTQVNAIDKD 91
V E P+G+ +T ++A D D
Sbjct: 933 KVPEDMPLGTVLTFLDASDPD 953
Score = 33.5 bits (75), Expect = 0.41, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTE-REQETVLE 74
+ V LDYET Y L + V + G +S + + ++D ND+ P F Q T+ E
Sbjct: 772 LTVAAALDYETTSFYVLNVTVYDLGTPPKSSWKLLTVTVKDWNDKPPRFPPGGYQLTISE 831
Query: 75 GEPIGSKVTQVNAIDKD 91
+G+ V ++ D D
Sbjct: 832 DTEVGTTVAELKTRDTD 848
Score = 32.0 bits (71), Expect = 1.3, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQET-VLE 74
I V LD+ + + LT++ E+ G+ Q A V + + + P+F++ E + E
Sbjct: 1612 ITVAQRLDHVHLNRHALTVKAEDQGSPQRHDLAMVVVHVHPSDSSAPIFSKDEYFIEIPE 1671
Query: 75 GEPIGSKVTQVNA 87
PIGS + ++A
Sbjct: 1672 SVPIGSPILLISA 1684
Score = 30.4 bits (67), Expect = 3.2, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 12 TWADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIIL-EDVNDEIPLFTEREQE 70
T I + PLD YNLT+ V +G +A++ VHI++ ++N P F + +
Sbjct: 1398 TTGSIVIARPLDTRRKSSYNLTVEV-TDGFHTIATQ--VHILMIANINHHRPQFLQDHYD 1454
Query: 71 TVLEGEPI-GSKVTQVNAIDKD 91
+ + + G ++ +V A D+D
Sbjct: 1455 IRVPQDTLPGVELLRVQATDQD 1476
>sp|Q9UN71|PCDGG_HUMAN Protocadherin gamma-B4 OS=Homo sapiens GN=PCDHGB4 PE=2 SV=1
Length = 923
Score = 50.8 bits (120), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 13 WADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETV 72
+ ++ + PLD E K Y+LT+ + GA L+S A +H+++ D ND P+F++
Sbjct: 191 YPEMVLKTPLDREKQKSYHLTLTALDFGAPPLSSTAQIHVLVTDANDNAPVFSQDVYRVS 250
Query: 73 L-EGEPIGSKVTQVNAIDKD 91
L E G+ V QV A D+D
Sbjct: 251 LSENVYPGTTVLQVTATDQD 270
Score = 49.3 bits (116), Expect = 7e-06, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQET-VLEGEPIGS 80
LD E EYN+T+ + G L+S +++ + + DVND P+F++ V E P G+
Sbjct: 408 LDREQNPEYNITVTATDRGKPPLSSSSSITLHIGDVNDNAPVFSQSSYIVHVAENNPPGA 467
Query: 81 KVTQVNAIDKDGTFPNNQL 99
++QV A D D PN Q+
Sbjct: 468 SISQVRASDPD-LGPNGQV 485
Score = 35.8 bits (81), Expect = 0.077, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 14 ADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIP-LFTEREQETV 72
+I V + LD+E +KEY++ + + G + ++ TV + + D ND P + + +
Sbjct: 297 GEITVLNTLDFEEVKEYSIVLEARDGGG--MIAQCTVEVEVIDENDNAPEVIFQSLPNLI 354
Query: 73 LEGEPIGSKVTQVNAIDKD 91
+E +G+ + + DKD
Sbjct: 355 MEDAELGTHIALLKVRDKD 373
Score = 32.3 bits (72), Expect = 0.82, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 26/41 (63%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIP 62
D+E ++ + LT++ + G+ L++ ++ ++++D ND P
Sbjct: 518 FDHEQLRAFELTLQARDQGSPALSANVSLRVLVDDRNDNAP 558
>sp|Q5DRA8|PCDGG_PANTR Protocadherin gamma-B4 OS=Pan troglodytes GN=PCDHGB4 PE=3 SV=1
Length = 923
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 13 WADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETV 72
+ ++ + PLD E K Y+LT+ + GA L+S A +H+++ D ND P+F++
Sbjct: 191 YPEMVLKTPLDREKQKSYHLTLTALDFGAPPLSSTAQIHVLVTDANDNAPVFSQDIYRVS 250
Query: 73 L-EGEPIGSKVTQVNAIDKD 91
L E G+ V QV A D+D
Sbjct: 251 LSENVYPGTTVLQVTATDQD 270
Score = 50.1 bits (118), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQET-VLEGEPIGS 80
LD E EYN+T+ + G L+S +++ + + DVND P+F++ V E P G+
Sbjct: 408 LDREQNPEYNITVTARDRGKPPLSSSSSITLHIGDVNDNAPVFSQSSYIVHVAENNPPGA 467
Query: 81 KVTQVNAIDKDGTFPNNQL 99
++QV+A D D PN Q+
Sbjct: 468 SISQVSASDPD-LGPNGQV 485
Score = 35.8 bits (81), Expect = 0.077, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 14 ADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIP-LFTEREQETV 72
+I V + LD+E +KEY++ + + G + ++ TV + + D ND P + + +
Sbjct: 297 GEITVLNTLDFEEVKEYSIVLEARDGGG--MIAQCTVEVEVIDENDNAPEVIFQSLPNLI 354
Query: 73 LEGEPIGSKVTQVNAIDKD 91
+E +G+ + + DKD
Sbjct: 355 MEDAELGTHIALLKVRDKD 373
Score = 32.3 bits (72), Expect = 0.82, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 26/41 (63%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIP 62
D+E ++ + LT++ + G+ L++ ++ ++++D ND P
Sbjct: 518 FDHEQLRAFELTLQARDQGSPALSANVSLRVLVDDRNDNAP 558
>sp|Q9Y5G2|PCDGE_HUMAN Protocadherin gamma-B2 OS=Homo sapiens GN=PCDHGB2 PE=2 SV=1
Length = 931
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQET-VLEGEPIGS 80
LD E I EYNLTI + G L+S V + + DVND P+F + V E P G+
Sbjct: 410 LDREEIPEYNLTITATDGGKPPLSSSIIVTLHISDVNDNAPVFQQTSYMVHVAENNPPGA 469
Query: 81 KVTQVNAIDKD 91
+ Q++A D D
Sbjct: 470 SIAQISASDPD 480
Score = 34.3 bits (77), Expect = 0.22, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 13 WADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETV 72
+ ++ + H LD E + L + + G + + I + D ND P+F++
Sbjct: 191 YPELILKHSLDREEHSLHQLVLTAVDGGDPPQSGTTQIRIKVTDANDNPPVFSQDVYRVT 250
Query: 73 L-EGEPIGSKVTQVNAIDKD 91
L E P G V QV A D+D
Sbjct: 251 LREDVPPGFFVLQVTATDRD 270
Score = 32.3 bits (72), Expect = 0.92, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 26/41 (63%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIP 62
D+E ++ + LT++ + G+ L++ ++ +++ D+ND P
Sbjct: 520 FDHEQLRAFELTLQARDQGSPALSANVSLRVLVGDLNDNAP 560
>sp|O88277|FAT2_RAT Protocadherin Fat 2 OS=Rattus norvegicus GN=Fat2 PE=1 SV=1
Length = 4351
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQET-VLE 74
+ V PLDYE+ ++ T+R + SEATV +++ED+ND P F++ T V E
Sbjct: 2225 LTVTGPLDYESKNKHVFTVRATDTALGSF-SEATVEVLVEDINDNPPTFSQLVYTTSVSE 2283
Query: 75 GEPIGSKVTQVNAIDKD 91
G P + V Q+ A D+D
Sbjct: 2284 GSPAQTPVIQLLASDQD 2300
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 21 PLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTERE-QETVLEGEPIG 79
PLD E Y LT+ + G+ L++ V+I + D+ND IP + +VLE P+G
Sbjct: 1094 PLDREFTPYYWLTVLAVDRGSVPLSAVTEVYIEVTDINDNIPSMSRPVFYPSVLEDAPLG 1153
Query: 80 SKVTQVNAIDKDGT 93
+ V Q+ A D D +
Sbjct: 1154 TSVLQLEAWDPDSS 1167
Score = 42.7 bits (99), Expect = 6e-04, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 3/83 (3%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQET-VLE 74
++V LD+E Y+L +R ++G L + V + + DVND P F + T V E
Sbjct: 3380 LQVAKALDWEQTPSYSLRLRATDSGQPPLHEDTEVAVEVVDVNDNPPRFFQLNYSTSVQE 3439
Query: 75 GEPIGSKVTQVNAIDKDGTFPNN 97
PIG KV Q+ D D P N
Sbjct: 3440 NSPIGIKVLQLILDDPDS--PQN 3460
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVLE-GEPIGS 80
D E + + + V +N Q ++A V + +EDVND IP F TV++ G G
Sbjct: 2028 FDREQQDTHEVAVEVRDNRVPQRVAQALVRVSVEDVNDNIPEFQHLPYYTVIQDGTEPGD 2087
Query: 81 KVTQVNAIDKD 91
+ QV+A DKD
Sbjct: 2088 VLFQVSATDKD 2098
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE-TVLEGEPIGS 80
LDYET + + + +R + G L E V + + D+ND P F E + E V E G
Sbjct: 2337 LDYETHQHFRVKVRAMDKGDPPLTGETLVVVNVSDINDNPPKFREPQYEANVSELATCGH 2396
Query: 81 KVTQVNAIDKD 91
V +V A+D D
Sbjct: 2397 LVLKVQALDPD 2407
Score = 40.8 bits (94), Expect = 0.002, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 16 IKVNHPLDYETIKE-YNLTIRVENNGAQ-QLASEATVHIILEDVNDEIPLFTEREQETVL 73
I P+DYE +K Y +R + G+ + E +V + L+++ND P+F E L
Sbjct: 514 ISTTKPMDYELMKRIYTFRVRASDWGSPFRQEKEVSVSLRLKNLNDNQPMFEEVNCTVSL 573
Query: 74 EGE-PIGSKVTQVNAIDKD 91
+ P+G + V+AID D
Sbjct: 574 RQDVPVGKSIMAVSAIDMD 592
Score = 39.3 bits (90), Expect = 0.008, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 16 IKVNHPLDYETIKEYNLTIRVE-NNGAQQLASEATVHIILEDVNDEIPLFTEREQETVL- 73
+KV +D+E+ K Y + + + L S +V I +EDVND P+F + L
Sbjct: 2750 LKVRKAMDHESTKWYQIDLMAHCPHEDTDLVSLVSVSIQVEDVNDNRPVFEADPYKAFLT 2809
Query: 74 EGEPIGSKVTQVNAIDKD 91
E P G+ V QV A D+D
Sbjct: 2810 ENMPGGTTVIQVTANDQD 2827
Score = 37.4 bits (85), Expect = 0.025, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTER-------EQETVLE 74
LD E EY L + V++NG L S + V + + DVND P+F+ + E+ + L
Sbjct: 1200 LDRENKDEYVLEVTVQDNGDPSLRSTSRVVVCILDVNDNPPMFSHKLFNVRLSERLSPLS 1259
Query: 75 GEPI 78
EP+
Sbjct: 1260 PEPV 1263
Score = 36.6 bits (83), Expect = 0.042, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 18 VNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFT-EREQETVLEGE 76
VN LD+ET +Y L+I + L+ T+ I + DVN+ P FT + VLE
Sbjct: 3277 VNGSLDFETNPKYFLSIECSRKSSSSLSDVTTIVINVTDVNEHHPRFTHDLYTVRVLENA 3336
Query: 77 PIGSKVTQVNAIDKDG 92
+G + V+A D DG
Sbjct: 3337 VVGDVILTVSASDDDG 3352
Score = 36.6 bits (83), Expect = 0.051, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIP-LFTEREQETVLEGEPIGS 80
LD E YNL + + G Q +E T+HI EDVND P F V + + +
Sbjct: 3075 LDRERKDVYNLVAKATDGGGQSCQAEVTLHI--EDVNDNAPRFFPSHCDVAVFDNTTVKT 3132
Query: 81 KVTQVNAIDKD 91
V V A D D
Sbjct: 3133 PVAVVFARDPD 3143
Score = 35.4 bits (80), Expect = 0.098, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 22 LDYETIKEYNLTIRVENNGAQ-QLASEATVHIILEDVNDEIPLF-TEREQETVLEGEPIG 79
LD ET + Y + ++G QL+S+A V + + D ND P F +E + +V+E G
Sbjct: 2865 LDCETQQTYRFYVVAFDHGQTIQLSSQALVEVSITDENDNPPRFASEDYRGSVVENNEPG 2924
Query: 80 SKVTQVNAIDKDGTFPNNQL 99
V + +D D + N Q+
Sbjct: 2925 ELVATLKTLDADVSDQNRQV 2944
Score = 34.7 bits (78), Expect = 0.16, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 14 ADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLF 64
DI + P DY+ + +Y+L + ++G L +E VH+ + N PLF
Sbjct: 2123 GDISLKKPFDYQALNKYHLRVIARDSGIPPLQTEVEVHVTVR--NKSNPLF 2171
Score = 33.9 bits (76), Expect = 0.29, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Query: 14 ADIKVNHPLDYETIKEYNLTI--RVENNGAQQLASEATVHIILEDVNDEIP-LFTEREQE 70
++ V LD E+ +Y L R + QL S + + LED+ND P TE +
Sbjct: 873 GELVVTGHLDRESESQYILKAEARDQPTKGHQLFSVTDLIVTLEDINDNPPQCITEHRRL 932
Query: 71 TVLEGEPIGSKVTQVNAIDKD 91
V E P+G+ +T ++A D D
Sbjct: 933 KVPEDMPLGTVLTFLDASDPD 953
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTE-REQETVLEGEPIGS 80
LDYET Y L + V + G +S + + ++D ND P F Q T+ E +G+
Sbjct: 778 LDYETTSFYVLNVTVYDLGTPPKSSWKLLTVTVKDWNDNPPRFPPGGYQLTISEDTEVGT 837
Query: 81 KVTQVNAIDKD 91
+ ++ D D
Sbjct: 838 TIAELKTEDAD 848
Score = 31.6 bits (70), Expect = 1.7, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 12 TWADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHI-ILEDVNDEIPLFTEREQE 70
T I + PLD YNLT+ V +G +A++ VHI ++ ++N P F + E
Sbjct: 1398 TTGSIVIARPLDTRRKSSYNLTVEV-TDGFHTIATQ--VHIFMIANINHHRPQFLQDHYE 1454
Query: 71 TVLEGEPI-GSKVTQVNAIDKD 91
+ + + G ++ +V A D+D
Sbjct: 1455 IRVPQDTLPGVELLRVQATDQD 1476
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILE--DVNDEIPLFTEREQETVLEGEPI- 78
LD+E + I V + G L + + +I+ DVND P F+E+ E + EPI
Sbjct: 1828 LDFEDTPLFQFNIYVHDQGTPILFAPRSAKVIIHVRDVNDSPPRFSEQIYEVAVV-EPIH 1886
Query: 79 -GSKVTQVNAIDKD 91
G + V A D D
Sbjct: 1887 PGMGLLTVQAEDND 1900
>sp|P58365|CAD23_RAT Cadherin-23 OS=Rattus norvegicus GN=Cdh23 PE=2 SV=1
Length = 3317
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 12 TWADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTERE-QE 70
+ + N +DYE + N T+R +NG+ A+E V++ + D+ND P+F + QE
Sbjct: 2348 SAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLEIVDINDNNPIFDQLSYQE 2407
Query: 71 TVLEGEPIGSKVTQVNAIDKD-GTF 94
V E +G+ + +V A D D G F
Sbjct: 2408 AVFEDVAVGTVILRVTATDADSGNF 2432
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHII---LEDVNDEIPLFTERE-QET 71
+ VN PLD E I EY LT+ V++N + ++ L D ND PLFTE Q
Sbjct: 1906 VTVNRPLDRERIPEYRLTVSVKDNPENPRIARKDFDLLLVSLADENDNHPLFTEGTYQAE 1965
Query: 72 VLEGEPIGSKVTQVN----AIDKD 91
V+E P G+ +T +N A+D D
Sbjct: 1966 VMENSPAGTPLTVLNGPILALDAD 1989
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 19 NHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE-TVLEGEP 77
N +D E + Y LT+ + G L+ ATV I+++D+ND P F Q +VLE
Sbjct: 2127 NATIDREEQESYRLTVVATDRGTVPLSGTATVTILIDDINDSRPEFLNPIQTVSVLESTE 2186
Query: 78 IGSKVTQVNAIDKD 91
G+ + V AID D
Sbjct: 2187 PGTVIANVTAIDLD 2200
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE-TVLEGEPIGS 80
LD ETI YNLTI + G L+S V I + D+ND P+ T+ E P+ S
Sbjct: 1807 LDRETIAFYNLTICARDRGVPPLSSTMLVGIRVLDINDNDPVLLNLPMNITISENSPVSS 1866
Query: 81 KVTQVNAIDKD 91
V V A D D
Sbjct: 1867 FVAHVLASDAD 1877
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 16 IKVNHPLDYETIKEYNLTIRV-ENNGAQQLASEATVHIILEDVNDEIPLFTEREQET-VL 73
+ V LDYE + Y LT+ + + + L++ A + II+ DV D P+F T +
Sbjct: 187 VTVIRELDYEVTQAYQLTVNATDQDKTRPLSTLANLAIIITDVQDMDPIFINLPYSTNIY 246
Query: 74 EGEPIGSKVTQVNAIDKDGTFPNN 97
E P G+ V + A+D+D P
Sbjct: 247 EHSPPGTTVRVITAVDQDKGRPRG 270
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVL-EGEPIGS 80
LDYE I+ + LT+ + G ++ ++++ DVND +P F + L E EP +
Sbjct: 519 LDYELIQRFTLTVIARDGGGEETTGRVRINVL--DVNDNVPTFQKDAYVGALRENEPSVT 576
Query: 81 KVTQVNAIDKDGTFPNN 97
++ ++ A D+D PNN
Sbjct: 577 QLVRLRATDEDSP-PNN 592
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTERE--QETVL 73
++ PLD E + L N+ + S V + +EDVNDE P+FT+++ + +
Sbjct: 1158 VRGPRPLDRERNSSHVLMAEAYNHDLGPMRSSVRVIVYVEDVNDEAPVFTQQQYNRLGLR 1217
Query: 74 EGEPIGSKVTQVNAIDKD 91
E IG+ V V A D+D
Sbjct: 1218 ETAGIGTSVIVVRATDRD 1235
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 21 PLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVLEGEP--I 78
P D E Y+L + VE+ G L++ V++ + D ND P+F + E VL+ P +
Sbjct: 1589 PPDRERQNFYHLVVTVEDEGTPTLSATTHVYVTIVDENDNAPVFQQPHYEVVLDEGPDTV 1648
Query: 79 GSKVTQVNAIDKD 91
+ + V A+D D
Sbjct: 1649 NTSLITVQALDLD 1661
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 22 LDYETIKEYNLTIRVENNG--AQQLASEATVHIILEDVNDEIPLFTEREQE-TVLEGEPI 78
LD ET Y L + +N ++ ATV + + DVND P+F + E +V E P
Sbjct: 1056 LDRETTAAYTLVLEAIDNVPVGKRRTGTATVFVTVLDVNDNRPIFLQSSYEASVPEDIPE 1115
Query: 79 GSKVTQVNAIDKD 91
G + Q+ A D D
Sbjct: 1116 GHSIVQLKATDAD 1128
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVL-E 74
I+V PLDYET+ Y+ + N A V I L + ND P+F++ L E
Sbjct: 411 IRVAIPLDYETVDRYDFDL-FANESVPDHVGYAKVKITLINENDNRPIFSQPLYNVSLYE 469
Query: 75 GEPIGSKVTQVNAIDKD-GTF 94
+G+ V V A D D GTF
Sbjct: 470 NITVGTSVLTVLATDNDVGTF 490
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIP-LFTEREQETVLEGEPIGS 80
LD E I EY L + + G +S +T+ I + DVNDE P F +V E P
Sbjct: 951 LDRERIAEYQLRVVASDAGTPTKSSTSTLTIRVLDVNDETPTFFPAVYNVSVSEDVPREF 1010
Query: 81 KVTQVNAIDKD 91
+V +N D D
Sbjct: 1011 RVVWLNCTDND 1021
Score = 35.8 bits (81), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 14 ADIKVNHPLDYETIKEYNLTIRVENNGA--QQLASEATVHIILEDVNDEIPLFTEREQET 71
+I LD ET EY L +R + G Q ATV++ L D+ND P + +
Sbjct: 724 GEITTTSLLDRETKAEYILIVRAVDGGVGHNQKTGIATVNVTLLDINDNHPTWKDAPYYI 783
Query: 72 -VLEGEPIGSKVTQVNAIDKD 91
++E P S VT V A+D D
Sbjct: 784 NLVEMTPPDSDVTTVVAVDPD 804
Score = 35.4 bits (80), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLF--TEREQETVL 73
I V +D E Y LT+ V ++G ++ S V++ + D ND P F T +V
Sbjct: 1369 ITVKGLVDREKGDFYTLTV-VADDGGPKVDSTVKVYVTVLDENDNSPRFDFTSDSAISVP 1427
Query: 74 EGEPIGSKVTQVNAIDKDG 92
E P+G +V V A D D
Sbjct: 1428 EDCPVGQRVATVKARDPDA 1446
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 50 VHIILEDVNDEIPLFTEREQET-VLEGEPIGSKVTQVNAIDKDGTFPNNQLL 100
V ++LED+ND+ P FT+ E V +GS++ QV A+D D NN L+
Sbjct: 2830 VRVVLEDINDQPPRFTKAEYTAGVATDAKVGSELIQVLALDAD--IGNNSLV 2879
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Query: 18 VNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQET-VLEGE 76
+ PLD ET E+ + V + Q V+I + DVND P F + + E
Sbjct: 89 LRQPLDRETKSEFTVEFSVSD---HQGVITRKVNIQVGDVNDNAPTFHNQPYSVRIPENT 145
Query: 77 PIGSKVTQVNAIDKD 91
P+G+ + VNA D D
Sbjct: 146 PVGTPIFIVNATDPD 160
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 21 PLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTERE-QETVLEGEPIG 79
P++ E +++ +++ + S ATV + L D+ND P F VLEG P G
Sbjct: 845 PVEAELMRKIIVSVTDCGRPPLKATSSATVFVNLLDLNDNDPTFQNLPFVAEVLEGTPAG 904
Query: 80 SKVTQVNAIDKD 91
V QV AID D
Sbjct: 905 VSVYQVVAIDLD 916
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 14 ADIKVNHPLDYETIKEYNLTIRVENNGAQQLAS--EATVHIILE--DVNDEIPLFTEREQ 69
DI V LD E Y LT ++N ++ E +V +++ DVND P F++ +
Sbjct: 2453 GDIYVLSSLDREKKDHYILTALAKDNPGDVASNRRENSVQVVIRVLDVNDCRPQFSKPQF 2512
Query: 70 ET-VLEGEPIGSKVTQVNAIDKD 91
T V E EP G+ V + A D+D
Sbjct: 2513 STSVYENEPAGTSVITMLATDQD 2535
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVL-- 73
+ PL ++ + +NLT+ + G L + + + DVND P+F T+L
Sbjct: 2563 VTTQRPL--QSYERFNLTVVATDGGEPPLWGTTMLLVEVIDVNDNRPVFVRPPNGTILHI 2620
Query: 74 -EGEPIGSKVTQVNAIDKD 91
E P+ S V +V A DKD
Sbjct: 2621 KEEIPLRSNVYEVYATDKD 2639
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Query: 14 ADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVL 73
++ V PLD E + Y L I + G + + + + DVND P+ V
Sbjct: 1475 GEVFVAKPLDREELDHYILKIVASDRGTPPRKKDHILQVTILDVNDNPPVIESPFGYNVS 1534
Query: 74 EGEPI--GSKVTQVNAIDKD 91
E + G+ V QV A D+D
Sbjct: 1535 VNENVGGGTSVVQVRATDRD 1554
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 13 WADIKVNHPLDYETIKE--YNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQ- 69
+ I V+ PLDYE I LT+ ++ G L S V I + D ND P F++
Sbjct: 616 YGVISVSRPLDYEQIPNGLIYLTVMAKDAGNPPLYSTVPVTIEVFDENDNPPTFSKPAYF 675
Query: 70 ETVLEGEPIGSKVTQVNAIDKD 91
+V+E G+ V +NA D D
Sbjct: 676 VSVVENIMAGATVLFLNATDLD 697
Score = 32.3 bits (72), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 9/87 (10%)
Query: 14 ADIKVNHPLDYETIKEYNLTIRVENNGA-----QQLASEATVHIILEDVNDEIPLFTE-- 66
+ V PL+ E + Y +T+ V +N + A + + + DVND P F
Sbjct: 2236 GSVIVKSPLNRELVATYEVTLSVIDNASDLPERSVSVPNAKLTVNILDVNDNTPQFKPFG 2295
Query: 67 --REQETVLEGEPIGSKVTQVNAIDKD 91
E VLEG G+ + V A+D D
Sbjct: 2296 ITYYTERVLEGATPGTTLIAVAAVDPD 2322
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 10/85 (11%)
Query: 22 LDYE-TIKEYNLTIRVENNG---AQQLASEATVHIILEDVNDEIPLFTEREQET---VLE 74
LDYE + Y L + + + +L S TV + + D+ND +P F R+ E V E
Sbjct: 1696 LDYEISHGRYTLIVTATDQCPILSHRLTSTTTVLVNVNDINDNVPTF-PRDYEGPFDVTE 1754
Query: 75 GEPIGSKVTQVNAIDKDGTFPNNQL 99
G+P G +V A D+D + PN Q+
Sbjct: 1755 GQP-GPRVWTFLAHDRD-SGPNGQV 1777
>sp|Q99PF4|CAD23_MOUSE Cadherin-23 OS=Mus musculus GN=Cdh23 PE=1 SV=2
Length = 3354
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 12 TWADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTERE-QE 70
+ + N +DYE + N T+R +NG+ A+E V++ + D+ND P+F + QE
Sbjct: 2350 SAGKVIANRTVDYEEVHWLNFTVRASDNGSPPRAAEIPVYLEIVDINDNNPIFDQPSYQE 2409
Query: 71 TVLEGEPIGSKVTQVNAIDKD-GTF 94
V E +G+ + +V A D D G F
Sbjct: 2410 AVFEDIAVGTVILRVTATDADSGNF 2434
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 8/88 (9%)
Query: 12 TWADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHII---LEDVNDEIPLFTERE 68
T + VN PLD E I EY LT+ V++N + ++ L D ND PLFTE
Sbjct: 1904 TTGIVTVNRPLDRERIPEYRLTVSVKDNPENPRIARKDFDLLLVSLADENDNHPLFTEGT 1963
Query: 69 -QETVLEGEPIGSKVTQVN----AIDKD 91
Q V+E P G+ +T +N A+D D
Sbjct: 1964 YQAEVMENSPAGTPLTVLNGPILALDAD 1991
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 20 HPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTERE--QETVLEGEP 77
PLD E + L + N+ + S V + +EDVNDE P+FT+++ + + E
Sbjct: 1164 RPLDRERNSSHVLMVEAYNHDLGPMRSSVRVIVYVEDVNDEAPVFTQQQYNRLGLRETAG 1223
Query: 78 IGSKVTQVNAIDKD 91
IG+ V V A DKD
Sbjct: 1224 IGTSVIVVRATDKD 1237
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE-TVLEGEPIGS 80
LD ETI YNLTI + G L+S V I + D+ND P+ T+ E P+ S
Sbjct: 1809 LDRETIAFYNLTICARDRGVPPLSSTMLVGIRVLDINDNDPVLLNLPMNVTISENSPVSS 1868
Query: 81 KVTQVNAIDKD 91
V V A D D
Sbjct: 1869 FVAHVLASDAD 1879
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 22 LDYETIKEYNLTIRVENNG--AQQLASEATVHIILEDVNDEIPLFTEREQE-TVLEGEPI 78
LD ET Y L + +NG ++ ATV + + DVND P+F + E +V E P
Sbjct: 1058 LDRETTAAYTLVLEAIDNGPVGKRRTGTATVFVTVLDVNDNRPIFLQSSYEASVPEDIPE 1117
Query: 79 GSKVTQVNAIDKD 91
G + Q+ A D D
Sbjct: 1118 GHSIVQLKATDAD 1130
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVL-EGEPIGS 80
LDYE I+ + LT+ + G ++ ++++ DVND +P F + L E EP +
Sbjct: 521 LDYELIQRFTLTVIARDGGGEETTGRVRINVL--DVNDNVPTFQKDAYVGALRENEPSVT 578
Query: 81 KVTQVNAIDKDGTFPNN 97
++ ++ A D+D PNN
Sbjct: 579 QLVRLRATDEDSP-PNN 594
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 19 NHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE-TVLEGEP 77
N +D E + Y LT+ + G L+ A V I+++D+ND P F Q +VLE
Sbjct: 2129 NATIDREEQESYRLTVVATDRGTVPLSGTAIVTILIDDINDSRPEFLNPIQTVSVLESAE 2188
Query: 78 IGSKVTQVNAIDKD 91
G+ + V AID D
Sbjct: 2189 PGTIIANVTAIDLD 2202
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 16 IKVNHPLDYETIKEYNLTIRV-ENNGAQQLASEATVHIILEDVNDEIPLFTEREQET-VL 73
+ V LDYE + Y LT+ + + + L++ A + II+ D+ D P+F T +
Sbjct: 187 VTVIQELDYEVTQAYQLTVNATDQDKTRPLSTLANLAIIITDMQDMDPIFINLPYSTNIY 246
Query: 74 EGEPIGSKVTQVNAIDKDGTFPNN 97
E P G+ V + A+D+D P
Sbjct: 247 EHSPPGTTVRVITAVDQDKGRPRG 270
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 21 PLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVLEGEP--I 78
P D E Y+L + VE+ G L++ V++ + D ND P+F + E VL+ P I
Sbjct: 1591 PPDRERQNFYHLVVTVEDEGTPTLSATTHVYVTIVDENDNAPVFQQPHYEVVLDEGPDTI 1650
Query: 79 GSKVTQVNAIDKD 91
+ + V A+D D
Sbjct: 1651 NTSLITVQALDLD 1663
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVL-E 74
I+V PLDYET+ Y+ + N A V I L + ND P+F++ L E
Sbjct: 413 IRVAIPLDYETVDRYDFDL-FANESVPDHVGYAKVKITLINENDNRPIFSQPLYNVSLYE 471
Query: 75 GEPIGSKVTQVNAIDKD-GTF 94
+G+ V V A D D GTF
Sbjct: 472 NITVGTSVLTVLATDNDVGTF 492
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPL--FTEREQETVL 73
I V +D E Y LT+ V ++G ++ S V+I + D ND P FT +V
Sbjct: 1371 ITVKGLVDREKGDFYTLTV-VADDGGPKVDSTVKVYITVLDENDNSPRFDFTSDSAISVP 1429
Query: 74 EGEPIGSKVTQVNAIDKDG 92
E P+G +V V A D D
Sbjct: 1430 EDCPVGQRVATVKARDPDA 1448
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Query: 14 ADIKVNHPLDYETIKEYNLTIRVENNGA--QQLASEATVHIILEDVNDEIPLFTEREQET 71
+I LD ET EY L +R + G Q ATV++ L D+ND P + +
Sbjct: 726 GEITTTSLLDRETKSEYILIVRAVDGGVGHNQKTGIATVNVTLLDINDNHPTWKDAPYYI 785
Query: 72 -VLEGEPIGSKVTQVNAIDKD 91
++E P S VT V A+D D
Sbjct: 786 NLVEMTPPDSDVTTVVAVDPD 806
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIP-LFTEREQETVLEGEPIGS 80
LD E I EY L + + G +S +T+ + + DVNDE P F +V E P
Sbjct: 953 LDRERIAEYQLRVVASDAGTPTKSSTSTLTVRVLDVNDETPTFFPAVYNVSVSEDVPREF 1012
Query: 81 KVTQVNAIDKD 91
+V +N D D
Sbjct: 1013 RVVWLNCTDND 1023
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 50 VHIILEDVNDEIPLFTEREQET-VLEGEPIGSKVTQVNAIDKDGTFPNNQLL 100
V ++LED+ND+ P FT+ E V +GS++ QV A+D D NN L+
Sbjct: 2832 VRVVLEDINDQPPRFTKAEYTAGVATDAKVGSELIQVLALDAD--IGNNSLV 2881
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 13 WADIKVNHPLDYETIKE--YNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQ- 69
+ I V+ PLDYE I LT+ ++ G L S V I + D ND P F++
Sbjct: 618 YGVISVSRPLDYEQIPNGLIYLTVMAKDAGNPPLYSTVPVTIEVFDENDNPPTFSKPAYF 677
Query: 70 ETVLEGEPIGSKVTQVNAIDKD 91
+VLE G+ V +NA D D
Sbjct: 678 VSVLENIMAGATVLFLNATDLD 699
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 14 ADIKVNHPLDYETIKEYNLTIRVENNGAQQLAS--EATVHIILE--DVNDEIPLFTEREQ 69
DI V LD E Y LT ++N ++ E +V +++ DVND P F++ +
Sbjct: 2455 GDISVLSSLDREKKDHYILTALAKDNPGDVASNRRENSVQVVIRVLDVNDCRPQFSKPQF 2514
Query: 70 ET-VLEGEPIGSKVTQVNAIDKD 91
T V E EP G+ V + A D+D
Sbjct: 2515 STSVYENEPAGTSVITMLATDQD 2537
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Query: 18 VNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQET-VLEGE 76
+ PLD ET E+ + V + Q V+I + DVND P F + + E
Sbjct: 89 LRQPLDRETKSEFTVEFSVSD---HQGVITRKVNIQVGDVNDNAPTFHNQPYSVRIPENT 145
Query: 77 PIGSKVTQVNAIDKD 91
P+G+ + VNA D D
Sbjct: 146 PVGTPIFIVNATDPD 160
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 21 PLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTERE-QETVLEGEPIG 79
P++ E +++ +++ + S ATV + L D+ND P F +LEG P G
Sbjct: 847 PVEAELMRKIIVSVTDCGRPPLKATSSATVFVNLLDLNDNDPTFRNLPFVAEILEGTPAG 906
Query: 80 SKVTQVNAIDKD 91
V QV AID D
Sbjct: 907 VSVYQVVAIDLD 918
Score = 33.1 bits (74), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Query: 14 ADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVL 73
++ V PLD E + Y L + + G + + + + DVND P+ V
Sbjct: 1477 GEVFVAKPLDREELDHYILKVVASDRGTPPRKKDHILQVTILDVNDNPPVIESPFGYNVS 1536
Query: 74 EGEPI--GSKVTQVNAIDKD 91
E + G+ V QV A D+D
Sbjct: 1537 VNENVGGGTSVVQVRATDRD 1556
Score = 32.7 bits (73), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 9/87 (10%)
Query: 14 ADIKVNHPLDYETIKEYNLTIRVENNGA-----QQLASEATVHIILEDVNDEIPLFTE-- 66
+ V PL+ E + Y +T+ V +N + A + + + DVND P F
Sbjct: 2238 GSVMVKSPLNRELVATYEVTLSVIDNASDLPEHSVSVPNAKLTVNILDVNDNTPQFKPFG 2297
Query: 67 --REQETVLEGEPIGSKVTQVNAIDKD 91
E VLEG G+ + V A+D D
Sbjct: 2298 ITYYTERVLEGATPGTTLIAVAAVDPD 2324
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 10/85 (11%)
Query: 22 LDYE-TIKEYNLTIRVENNG---AQQLASEATVHIILEDVNDEIPLFTEREQET---VLE 74
LDYE + Y L + + + +L S TV + + D+ND +P F R+ E V E
Sbjct: 1698 LDYEISHGRYTLIVTATDQCPILSHRLTSTTTVLVNVNDINDNVPTF-PRDYEGPFDVTE 1756
Query: 75 GEPIGSKVTQVNAIDKDGTFPNNQL 99
G+P G +V A D+D + PN Q+
Sbjct: 1757 GQP-GPRVWTFLAHDRD-SGPNGQV 1779
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVL-- 73
+ PL ++ + +NLT+ + G L + + + DVND P+F T+L
Sbjct: 2565 VTTQRPL--QSYERFNLTVVATDGGEPPLWGTTMLLVEVIDVNDNRPVFVRPPNGTILHI 2622
Query: 74 -EGEPIGSKVTQVNAIDKD 91
E P+ S V +V A D D
Sbjct: 2623 KEEIPLRSNVYEVYATDND 2641
>sp|Q6V1P9|PCD23_HUMAN Protocadherin-23 OS=Homo sapiens GN=DCHS2 PE=2 SV=1
Length = 2916
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 21 PLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE-TVLEGEPIG 79
PLDYE ++ LT+ ++G L+S T+ + + DVNDE P+F + E +V E + G
Sbjct: 1226 PLDYEMKTQHILTVLALDDGTPALSSSQTLTVTVLDVNDEAPVFKQHLYEASVKENQNPG 1285
Query: 80 SKVTQVNAIDKDG 92
VT+V A+D+D
Sbjct: 1286 EFVTRVEALDRDS 1298
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 20 HPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQET-VLEGEPI 78
H LD E + L I ++G L+S A + I + DVND P F+ T V E P+
Sbjct: 2166 HSLDREASASHELVILASDSGCPPLSSTAVISIQVLDVNDNPPNFSSLSYHTHVKESTPL 2225
Query: 79 GSKVTQVNAIDKD 91
GS +T V+A D+D
Sbjct: 2226 GSHITVVSANDRD 2238
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Query: 14 ADIKVNHPLDYETIKEYNL-TIRVENNGAQQLASEATVHIILEDVNDEIPLFT-EREQET 71
D+ ++ LDYET Y I +++ L+S + I +ED ND P F E +
Sbjct: 1004 GDLFLSKELDYETTSHYLFRVITTDHSKNLSLSSTVFLSIDVEDQNDHSPSFQDELIVIS 1063
Query: 72 VLEGEPIGSKVTQVNAIDKDGTFPNNQL 99
V E PIG+ V NA D DG+F N+++
Sbjct: 1064 VEENVPIGTLVYVFNAKDDDGSFLNSRI 1091
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVLEGEPIGSK 81
LDYE Y+L ++ + G +L++ + + + D+ND P F E + E G
Sbjct: 1850 LDYELTSSYSLIVQATDKGMPRLSNTTVIKVQVTDINDNAPAFLPSEAVEITEDSLPGVI 1909
Query: 82 VTQVNAIDKD 91
VT V+ D D
Sbjct: 1910 VTHVSVHDVD 1919
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 21 PLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVL-EGEPIG 79
PLDYE + ++ LT++ + + S A V + + D ND P F ++ E PI
Sbjct: 2272 PLDYEKMTKFTLTVQASDAEKKHF-SFAVVFVSVLDDNDHAPQFMFSSFSCIVPENLPIS 2330
Query: 80 SKVTQVNAIDKDG 92
S + +NA+D D
Sbjct: 2331 STICSINALDFDA 2343
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTE----REQET-VLEGE 76
LD E + +T+ V + G+ + V++ + D+ND P F + +E VLEG+
Sbjct: 797 LDREHRGHHEMTVLVTDRGSPPRNATMAVYVSVTDINDNRPFFPQCLPGKELHVKVLEGQ 856
Query: 77 PIGSKVTQVNAIDKD 91
P+ VT V A D D
Sbjct: 857 PVNMLVTTVFAKDPD 871
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 4/69 (5%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTER-EQETVLEGEPIGS 80
LD+E + EY L I++ ++ +E + + + DVND P+F++ Q TV E P+G
Sbjct: 1953 LDFEEMTEYELLIQISDSVHY---TEGALVVRVLDVNDNPPVFSQDFYQVTVPESIPVGY 2009
Query: 81 KVTQVNAID 89
V ++A D
Sbjct: 2010 SVLTLSATD 2018
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 2/78 (2%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE-TVLE 74
I+ PLD+ET LT++ + G+ S V+I + DVND P F E + +
Sbjct: 433 IRTRKPLDHETQPVVVLTVQAQ-LGSAPACSSTEVNITVMDVNDNHPAFLRTSDEIRISQ 491
Query: 75 GEPIGSKVTQVNAIDKDG 92
P G+ + A D+D
Sbjct: 492 TTPPGTALYLARAEDRDS 509
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Query: 14 ADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLF-TEREQETV 72
++ LD E I + L I + G +S + + + D ND P F T Q +V
Sbjct: 1428 GELSTTRALDREQISNFTLVILCSDLGDPPRSSVIHLQVRVLDANDHSPSFPTLYYQSSV 1487
Query: 73 LEGEPIGSKVTQVNAIDKD 91
E +G+ V ++A+DKD
Sbjct: 1488 REDAEVGTVVLVLSAVDKD 1506
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Query: 22 LDYETIKEYNLTIRVEN---NGAQQLASEATVHIILEDVNDEIPLFTEREQETVLEGEPI 78
LD E+I LT+ + N + T I++ DVND P F V E +
Sbjct: 1120 LDRESIPTVILTVTASDQAVNVTDRRLRSLTAQIVILDVNDHNPTFISFPNAHVKEDVTV 1179
Query: 79 GSKVTQVNAIDKD 91
GS V + A D D
Sbjct: 1180 GSLVHHITAHDPD 1192
Score = 28.9 bits (63), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 44 LASEATVHIILEDVNDEIPLFTEREQETVL--EGEPIGSKVTQVNAIDKDG 92
L+++A V + LEDVND P+F T + E +P G+++ V A D+D
Sbjct: 157 LSAQAFVRVDLEDVNDNHPVFNPSTYVTSISDETQP-GTEIINVLATDQDS 206
>sp|Q9Y5G1|PCDGF_HUMAN Protocadherin gamma-B3 OS=Homo sapiens GN=PCDHGB3 PE=2 SV=3
Length = 929
Score = 49.3 bits (116), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQET-VLEGEPIGS 80
LD E I EYN+TI + G L+S T+ + + DVND +P+F + V E P G+
Sbjct: 410 LDREQIPEYNVTITATDKGNPPLSSSKTITLHILDVNDNVPVFHQASYTVHVAENNPPGA 469
Query: 81 KVTQVNAIDKD 91
+ V A D D
Sbjct: 470 SIAHVRASDPD 480
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 13 WADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTE-REQET 71
+ ++ + PLD E ++L + + G + + +I+ D ND P+FT+ +
Sbjct: 191 YPELVLKAPLDREEQPHHHLVLTAVDGGEPSRSCTTQIRVIVADANDNPPVFTQDMYRVN 250
Query: 72 VLEGEPIGSKVTQVNAIDKD 91
V E P GS V +V AID D
Sbjct: 251 VAENLPAGSSVLKVMAIDMD 270
Score = 34.3 bits (77), Expect = 0.23, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 10/82 (12%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTE----REQETVLE--- 74
D+E ++ + LT++ + G+ L++ ++ ++++D ND PL E + +
Sbjct: 520 FDHEQLRAFELTLQARDQGSPTLSANVSLRVLVDDRNDNAPLVLYPALGPEGSALFDMVP 579
Query: 75 --GEPIGSKVTQVNAIDKDGTF 94
EP G VT+V A+D D +
Sbjct: 580 RSAEP-GYLVTKVVAVDADSGY 600
>sp|Q08174|PCDH1_HUMAN Protocadherin-1 OS=Homo sapiens GN=PCDH1 PE=1 SV=2
Length = 1060
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVL-EGEPIGS 80
LD E Y+LTI+V++ G+ AS A + + + D ND P F E L E PIG
Sbjct: 238 LDRERWDSYDLTIKVQDGGSPPRASSALLRVTVLDTNDNAPKFERPSYEAELSENSPIGH 297
Query: 81 KVTQVNAIDKD 91
V QV A D D
Sbjct: 298 SVIQVKANDSD 308
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVL-E 74
++ PLDYE +K+Y + I ++G L+S ++ + + DVND P+FT+ E E
Sbjct: 458 LQTTTPLDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDNAPVFTQSVTEVAFPE 517
Query: 75 GEPIGSKVTQVNAIDKD 91
G + ++ A D D
Sbjct: 518 NNKPGEVIAEITASDAD 534
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 40/87 (45%), Gaps = 5/87 (5%)
Query: 10 LFTWA----DIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFT 65
LFT + +I+V LD E + Y L + + G+ L ATV + + D ND P F
Sbjct: 554 LFTISPETGEIQVKTSLDREQRESYELKVVAADRGSPSLQGTATVLVNVLDCNDNDPKFM 613
Query: 66 EREQE-TVLEGEPIGSKVTQVNAIDKD 91
+V+E P S V V ID D
Sbjct: 614 LSGYNFSVMENMPALSPVGMVTVIDGD 640
>sp|Q24292|DS_DROME Protein dachsous OS=Drosophila melanogaster GN=ds PE=1 SV=3
Length = 3503
Score = 48.9 bits (115), Expect = 8e-06, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 13 WADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTE-REQET 71
+ D++++ LD ET Y+L I + G L TV+I ++DVND P+F + R T
Sbjct: 182 YLDLQISGFLDRETTPGYSLLIEALDGGTPPLRGFMTVNITIQDVNDNQPIFNQSRYFAT 241
Query: 72 VLEGEPIGSKVTQVNAIDKDG 92
V E +G+ V QV A D D
Sbjct: 242 VPENATVGTSVLQVYASDTDA 262
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 14 ADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE--T 71
+I PLD E + Y+L + + G ++ V I + DVND P + +++ +
Sbjct: 1153 GEISTREPLDRELRELYDLVVEARDQGTPVRSARVPVRIHVSDVNDNAPEIADPQEDVVS 1212
Query: 72 VLEGEPIGSKVTQVNAIDKD 91
V E +P G++V +V A+D+D
Sbjct: 1213 VREEQPPGTEVVRVRAVDRD 1232
Score = 45.8 bits (107), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE-TVLEGEPIGS 80
LDYE+ + + L + + G L++ T+ + ++DVND P+F + E V E I +
Sbjct: 941 LDYESSQRHTLIVTATDGGVPSLSTNLTILVDVQDVNDNPPVFEKDEYSVNVSESRSINA 1000
Query: 81 KVTQVNAIDKD 91
++ QVNA D D
Sbjct: 1001 QIIQVNASDLD 1011
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVLEG 75
++ N LD E Y L I + G Q+ AT+ + + DVND P F TV E
Sbjct: 2327 VRTNIVLDREIRDIYKLKIIATDEGVPQMTGTATIRVQIVDVNDNQPTFPPNNLVTVSEA 2386
Query: 76 EPIGSKVTQVNAIDKDGTFP 95
+G+ +T ++A D D T+P
Sbjct: 2387 TELGAVITSISANDVD-TYP 2405
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTER-EQETVLEGEPIGS 80
+D ET LT+ + G L+S ATV + + DVND P+F + +V E EP+G
Sbjct: 516 IDCETEPVPQLTVVARDGGVPPLSSTATVLVTIHDVNDNEPIFDQSFYNVSVAENEPVGR 575
Query: 81 KVTQVNAIDKD 91
+ +V+A D D
Sbjct: 576 CILKVSASDPD 586
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Query: 21 PLDYETIKEYNLTIRVENNGA-QQLASEATVHIILEDVNDEIPLFT-EREQETVLEGEPI 78
PLD E Y L I+ + G + + I +ED ND P F + +V E P+
Sbjct: 1855 PLDREQHSRYTLQIQASDRGQPKSRQGHCNITIFVEDQNDNAPRFKLSKYTGSVQEDAPL 1914
Query: 79 GSKVTQVNAIDKD 91
G+ V Q++A+D D
Sbjct: 1915 GTSVVQISAVDAD 1927
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 18 VNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTER-EQETVLEGE 76
V+ PLD E + Y L++ + G L + ++ + + DVND P F + V+E
Sbjct: 405 VHLPLDREIVSNYTLSVVATDKGTPPLHASKSIFLRITDVNDNPPEFEQDLYHANVMEVA 464
Query: 77 PIGSKVTQVNAIDKD 91
G+ V QV A D+D
Sbjct: 465 DPGTSVLQVLAHDRD 479
Score = 37.0 bits (84), Expect = 0.033, Method: Composition-based stats.
Identities = 30/77 (38%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 18 VNHPLDYET-IKEYNLTIRVENNGAQQ-LASEATVHIILEDVNDEIPLFTEREQETVL-E 74
VN+ LDY++ K Y L IR ++ Q+ L S + L D ND P F E L E
Sbjct: 2761 VNNRLDYDSGAKSYELIIRACDSHHQRPLCSLQPFRLELHDENDNEPKFPLTEYVHFLAE 2820
Query: 75 GEPIGSKVTQVNAIDKD 91
EP+GS V + +A D D
Sbjct: 2821 NEPVGSSVFRAHASDLD 2837
Score = 36.6 bits (83), Expect = 0.046, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 44 LASEATVHIILEDVNDEIPLFTERE-QETVLEGEPIGSKVTQVNAIDKDG 92
LAS A + I LED ND P F++++ TV EG G+ V QV+A D D
Sbjct: 2249 LASYAELVIELEDENDNSPKFSQKQFVATVSEGNNKGTFVAQVHAFDSDA 2298
Score = 36.2 bits (82), Expect = 0.060, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 10/86 (11%)
Query: 16 IKVNHPLDYETIKEYNLTIRV---ENNGAQQLASEATVHIILEDVNDEIPLFTEREQET- 71
+ + PLD+E ++EY L ++ +N ++L + TV + + D ND P F
Sbjct: 1498 LSLQAPLDFEAVQEYLLIVQALDQSSNVTERLQTSVTVRLRILDANDHAPHFVSPNSSGG 1557
Query: 72 ------VLEGEPIGSKVTQVNAIDKD 91
+ + IG V + A+D+D
Sbjct: 1558 KTASLFISDATRIGEVVAHIVAVDED 1583
Score = 36.2 bits (82), Expect = 0.066, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIP-----LFTEREQE 70
I +N LD+ET + + L + +++G Q L + A V I + DVND P ++
Sbjct: 292 IYINKALDFETKELHELVVVAKDHGEQPLETTAFVSIRVTDVNDNQPTINVIFLSDDASP 351
Query: 71 TVLEGEPIGSKVTQVNAIDKD 91
+ E G V +++ D D
Sbjct: 352 KISESAQPGEFVARISVHDPD 372
Score = 35.0 bits (79), Expect = 0.14, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE-TVLE 74
I + PLD ET Y LT+ +NG ++ V + + D ND P F + + E + E
Sbjct: 1052 IYLRAPLDRETRDRYQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEE 1111
Query: 75 GEPIGSKVTQVNAIDKD 91
GS V V A D D
Sbjct: 1112 NLRRGSVVGVVTASDLD 1128
Score = 33.5 bits (75), Expect = 0.38, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 14 ADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVL 73
+I + LD+E Y + + G L++ A + + L DVND P+F RE + L
Sbjct: 614 GEICIAGELDFERRSSYEFPVLATDRGG--LSTTAMIKMQLTDVNDNRPVFYPREYKVSL 671
Query: 74 EGEPIGS 80
P S
Sbjct: 672 RESPKAS 678
Score = 32.7 bits (73), Expect = 0.63, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 14 ADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLF-TEREQETV 72
+I++ PLD+E + L I+ G + V+I +EDVND P F + +V
Sbjct: 829 GNIRIAKPLDHEAKSQVLLNIQA-TLGEPPVYGHTQVNIEVEDVNDNAPEFEASMVRISV 887
Query: 73 LEGEPIGSKVTQVNAIDKD 91
E +G+ + +A DKD
Sbjct: 888 PESAELGAPLYAAHAHDKD 906
Score = 29.3 bits (64), Expect = 7.0, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 23 DYETIKEYNLTIRVENNGAQQ-LASEATVHIILEDVNDEIPLFTER-EQETVLEGEPIGS 80
D E +NL I +++G + S +H+I++ ++ P F + + T+LE P GS
Sbjct: 1624 DVEKGGRFNLIIGAKDHGQPEPKKSSLNLHLIVQGSHNNPPRFLQAVYRATILENVPSGS 1683
Query: 81 KVTQVNA 87
V QV A
Sbjct: 1684 FVLQVTA 1690
>sp|Q2PZL6|FAT4_MOUSE Protocadherin Fat 4 OS=Mus musculus GN=Fat4 PE=1 SV=2
Length = 4981
Score = 48.9 bits (115), Expect = 9e-06, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 40/78 (51%)
Query: 14 ADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVL 73
+I+ PLD E I Y LT++ + G+ ++ V I + D ND P F++ V
Sbjct: 2725 GEIRSIRPLDREKISHYELTVKSSDKGSPSQSTSVKVIISILDENDNAPRFSQIFSAYVS 2784
Query: 74 EGEPIGSKVTQVNAIDKD 91
E P+G VT+V D+D
Sbjct: 2785 ENSPLGYTVTRVTTSDED 2802
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/79 (40%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQET-VLEGEPIGS 80
LDYET + Y LT+R E+ G Q A +I+ DVND P+F+ T ++E P+GS
Sbjct: 1904 LDYETQQYYILTVRAEDGGGQSTTIRAYFNIL--DVNDNPPVFSMSSYSTSLMENLPLGS 1961
Query: 81 KVTQVNAIDKDGTFPNNQL 99
V N D D N+QL
Sbjct: 1962 TVLVFNVTDADDGV-NSQL 1979
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/90 (38%), Positives = 48/90 (53%), Gaps = 8/90 (8%)
Query: 16 IKVNHPLDYETIKEYNLTIRV-ENNGA------QQLASEATVHIILEDVNDEIPLFTERE 68
IKV LD E I YNLT+ V +N+GA Q +S A++ I + D+ND P+F ++
Sbjct: 420 IKVASALDRERIPSYNLTVSVSDNSGAPPTAEVQARSSVASLVIFVNDINDHPPVFEQQV 479
Query: 69 QETVLEGE-PIGSKVTQVNAIDKDGTFPNN 97
L E P GS V+ V+A D D N
Sbjct: 480 YRVNLSEEVPPGSYVSGVSATDGDSGLNAN 509
Score = 47.4 bits (111), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVLEG 75
I V LD E++ YNLT+ ++G A++ + LED+ND P+ T E E VLE
Sbjct: 3464 ITVTSGLDRESLPVYNLTVLAVDSGTPSATGSASLVVTLEDINDNGPVLTVSEGE-VLEN 3522
Query: 76 EPIGSKVTQVNAIDKDGTFPNNQ 98
+ G+ V + + D D P NQ
Sbjct: 3523 KRPGTLVMTLQSTDPD--LPPNQ 3543
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLF-TEREQETVLEGEPIGS 80
LD E +Y L + VE+ G + V++ ++D+ND P+F + Q V E +GS
Sbjct: 208 LDREVTPQYQLLVEVEDKGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVGS 267
Query: 81 KVTQVNAIDKD 91
V QV A D D
Sbjct: 268 SVLQVAAADAD 278
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVLEG 75
+ ++ PLD+E I++Y + I + G +S + I + D+ND P F E + +
Sbjct: 2623 VSISQPLDFEKIQKYVVWIEARDGGFPPFSSYEKLDITVLDINDNAPTFEEDPFVSEILE 2682
Query: 76 EPIGSKVTQVNAIDKDGTFPNNQL 99
K+ V+A DKD + PN QL
Sbjct: 2683 NLSPRKILTVSATDKD-SGPNGQL 2705
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Query: 10 LFTWADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQ 69
+F + + LD E Y L + + + L++ V ++LEDVND PLF
Sbjct: 1046 IFPDGQLYIKSELDRELQDRYVLLVVASDRAVEPLSATVNVTVLLEDVNDNRPLFNSTNY 1105
Query: 70 ETVLEGEP-IGSKVTQVNAIDKD 91
E E GS V +V+A+DKD
Sbjct: 1106 TFYFEEEQRAGSFVGKVSAVDKD 1128
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 6/90 (6%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTER------EQ 69
I V PLD+E ++Y+LT++ + G L A I L DVND P+ R
Sbjct: 305 ITVREPLDFEARRQYSLTVQATDRGVPSLTGRAEAFIQLLDVNDNDPVVKFRYFPATSRY 364
Query: 70 ETVLEGEPIGSKVTQVNAIDKDGTFPNNQL 99
+V E +G+ V + D D N +
Sbjct: 365 ASVDENAQVGTVVALLTVTDADSPAANGNI 394
Score = 42.4 bits (98), Expect = 8e-04, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 30 YNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVL-EGEPIGSKVTQVNAI 88
Y + I + G QL+S + + + DVND P+F + E L E EP+ S+ +V A
Sbjct: 962 YQVEIVASDMGVPQLSSSILLTVYVHDVNDNPPVFDQISYEVTLSESEPVNSRFFKVQAS 1021
Query: 89 DKD 91
DKD
Sbjct: 1022 DKD 1024
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Query: 16 IKVNHPLDYETIKEYNLTIRVEN---NGAQQLASEATVHIILEDVNDEIPLFTEREQETV 72
+K LD E+ YNL I+V + + S A V IIL DVND P+F + +
Sbjct: 2000 LKTLKALDRESQSFYNLVIQVHDLPQPPTSRFTSTAQVSIILLDVNDNPPMFLSPKLTYI 2059
Query: 73 LEGEPIGSKVTQVNAIDKDGTFPNNQL 99
E PI + V + A D D + PN+ +
Sbjct: 2060 PENTPIDTVVFKAQATDPD-SGPNSYI 2085
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQET-VLEGEPIGS 80
LDYE Y+L I+ ++GA L S T+ I + D ND P F + VLE IG
Sbjct: 1273 LDYEATSAYSLLIQAVDSGAIPLNSTCTLSIDILDENDNTPSFPKSTLFVDVLENMRIGE 1332
Query: 81 KVTQVNAIDKD 91
V+ V A D D
Sbjct: 1333 LVSSVTATDSD 1343
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 32/87 (36%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVLEG 75
I V LD ET Y LT++ + G+ TV I L D+ND +P+F E +V
Sbjct: 2211 ITVAKSLDRETTPAYTLTVQATDRGSSPRTDSCTVAITLLDMNDFVPVF-ELSPYSVNVP 2269
Query: 76 EPIGS---KVTQVNAIDKDGTFPNNQL 99
E +G+ + QV A D D PN+QL
Sbjct: 2270 ENLGTLPRAILQVVARDDDQG-PNSQL 2295
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTERE-QETVLEGEPIGS 80
LDYE ++ +TI + G ++ + + DVND P+F E TV+E P G+
Sbjct: 3154 LDYEMSSKHEMTISATDGGWVARTGYCSLTVSVIDVNDNSPVFVPDEFFPTVMENAPSGT 3213
Query: 81 KVTQVNAIDKD 91
V +NA D D
Sbjct: 3214 TVIHLNATDAD 3224
Score = 40.8 bits (94), Expect = 0.003, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTERE--QETVLEGEPIG 79
LD E + L I + G S A + + + DVNDE P+F++ E + +V+E P G
Sbjct: 540 LDRELASQIVLNISARDQGVHPKVSYAQLVVTVLDVNDEKPVFSQPEGYEVSVVENAPTG 599
Query: 80 SKVTQVNAIDKD 91
+++ + A D+D
Sbjct: 600 TELLVLGATDRD 611
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 14 ADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQET-V 72
++ + LD E + Y+LT+ + G L+S V +++ D+ND P+F + +
Sbjct: 2104 GEVHLTGELDREEVSNYSLTVVATDKGQPPLSSSTEVVVMVLDINDNNPVFAQAMYRVQI 2163
Query: 73 LEGEPIGSKVTQVNAIDKD 91
E G+ + QV+A D D
Sbjct: 2164 KENILTGTDIIQVSAADND 2182
Score = 40.0 bits (92), Expect = 0.005, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQ-ETVLEGEPIGS 80
LD E Y L+I + G+ +S A V++ L D+ND P+F + + E EP GS
Sbjct: 647 LDREEQAFYCLSILATDLGSPPQSSTAQVNVSLLDINDNSPVFYPVQYFAHIQENEPGGS 706
Query: 81 KVTQVNAIDKD 91
VT V+A D D
Sbjct: 707 YVTTVSATDPD 717
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQ-ETVLEGEPIGS 80
LD+ET Y L I ++ G +S +V I + D ND P F + ++++E P+G+
Sbjct: 1378 LDFETQSLYKLNITAKDQGRPPRSSTMSVVIQVRDFNDNPPSFPPGDIFKSIVENIPLGT 1437
Query: 81 KVTQVNAIDKDGTFPNNQL 99
V V A D D N QL
Sbjct: 1438 SVISVTAHDPDADI-NGQL 1455
Score = 38.5 bits (88), Expect = 0.012, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 31/57 (54%)
Query: 8 YLLFTWADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLF 64
++L +++V LD E + L + + G+ L T++II++D+ND +P F
Sbjct: 2308 FVLTASGELRVTQSLDREARDHFVLVVTAADAGSPALTGTGTINIIVDDINDNVPTF 2364
Score = 38.5 bits (88), Expect = 0.013, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE-TVLEGEPIGS 80
LD+ET + Y+LT++ N ++ S ATV I L+ N+ +P F + V E G+
Sbjct: 3258 LDFETKQSYHLTVKAFNVPDEEKCSFATVDIQLKGTNEYVPRFVSKLYYFEVSEAASRGT 3317
Query: 81 KVTQVNAIDKD 91
V +V A D+D
Sbjct: 3318 AVGEVFASDRD 3328
Score = 37.7 bits (86), Expect = 0.023, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 14 ADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVL 73
DI ++ PL+ E Y + + ++G V I + D+ND P F+
Sbjct: 2827 GDIVISRPLNREDTDRYRIRVSAHDSG---WTVSTDVTIFVTDINDNTPRFSRPSYYLDC 2883
Query: 74 EGEP-IGSKVTQVNAIDKD 91
P +GS+VTQV+A D D
Sbjct: 2884 PELPELGSRVTQVSATDPD 2902
Score = 37.0 bits (84), Expect = 0.038, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 31 NLTIRV--ENNGAQQLASEATVHIILEDVNDEIPLFTERE-QETVLEGEPIGSKVTQVNA 87
N IRV ++ G L+S+A VHI + + N P F++ T+ E IGS V V+A
Sbjct: 3056 NFLIRVTAKDKGNPPLSSQAVVHITVTEENYHTPEFSQNHISATIPESHSIGSVVRTVSA 3115
Query: 88 IDKD 91
D+D
Sbjct: 3116 RDRD 3119
Score = 37.0 bits (84), Expect = 0.038, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 30 YNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVL-EGEPIGSKVTQVNAI 88
YNL + + G ++ S + +IL+ ++ P+FT+ + T+L EGEPIG+ V + A
Sbjct: 1597 YNLIVSATDLGPERRKSTTELTVILQGLDG--PVFTQTKYITILKEGEPIGTNVISIEAA 1654
Query: 89 DKDGT 93
G+
Sbjct: 1655 SPRGS 1659
Score = 36.6 bits (83), Expect = 0.049, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 14 ADIKVNHPLDYETIKE------YNLTIRVENNG-AQQLASEATVHIILEDVNDEIPLF-T 65
+I H D E++ ++ T+ + G Q L +ATVH+ ++D+ND P F
Sbjct: 1153 GEITSTHKFDRESLMRRRGTAVFSFTVTAMDRGLPQPLKDQATVHVYMKDINDNAPKFLK 1212
Query: 66 EREQETVLEGEPIGSKVTQVNAIDKD 91
+ Q TV E ++V +V+A D D
Sbjct: 1213 DFYQATVSETATNLTQVLRVSASDVD 1238
Score = 36.2 bits (82), Expect = 0.064, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 36 VENNGAQQLASEATVHIILEDVNDEIPLF-TEREQETVLEGEPIGSKVTQVNAIDKD 91
+E + A A V I L+D+ND P+F T+ TV E GSK+ Q+ A+D D
Sbjct: 1712 IEKSSAFPRTQRAEVEITLQDINDNPPVFPTDTLDLTVEENIGDGSKIMQLTAMDAD 1768
Score = 35.4 bits (80), Expect = 0.097, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLAS--EATVHIILEDVNDEIPLF---TEREQE 70
I V+ LD E + +L + +N G + A E TV+I + D ND P+F T R Q
Sbjct: 3357 IYVSGLLDREKEERVSLKVLAKNFGNIRGADIDEVTVNITVLDANDP-PVFSLSTYRVQ- 3414
Query: 71 TVLEGEPIGSKVTQVNAIDKD 91
+ EG PIG+ VT V+A D D
Sbjct: 3415 -ISEGVPIGTHVTFVSAFDSD 3434
Score = 35.0 bits (79), Expect = 0.14, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 8 YLLFTWADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVND 59
+ L T + +D E I ++ L++ ++GA Q++S TVHI + D ND
Sbjct: 3560 FSLSTAGVLSTTREIDREQIADFYLSVVTRDSGAPQMSSTGTVHITVLDQND 3611
Score = 32.7 bits (73), Expect = 0.72, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 27 IKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQET-VLEGEPIGSKVTQV 85
I ++ + + G L SE TV I D ND P F + + T V + +G+K+ +V
Sbjct: 2948 INRHSFIVTASDRGNPSLLSETTVTINTVDSNDNPPQFLQNKYFTPVTKNVKVGTKLIKV 3007
Query: 86 NAID 89
A+D
Sbjct: 3008 TAVD 3011
Score = 30.8 bits (68), Expect = 2.8, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 14 ADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE-TV 72
D+ LD E +Y+L +R ++ G Q +S+ ++I + DVND P F+ +
Sbjct: 1794 GDLIATKRLDREHRSKYSLLVRADD-GLQ--SSDMRINITISDVNDHTPRFSRPVYSFDI 1850
Query: 73 LEGEPIGSKVTQVNAIDKD 91
E GS V + A D D
Sbjct: 1851 PEDTTPGSLVAAILATDDD 1869
Score = 30.4 bits (67), Expect = 3.4, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE-TVLE 74
I LD E Y L + + G Q ++A V + + D D P+F++ V E
Sbjct: 745 ISTKMALDREEKTAYQLQVVATDGGNLQSPNQAIVTVTVLDTQDNPPVFSQAAYSFVVFE 804
Query: 75 GEPIGSKVTQVNAIDKD 91
+G V V+A D
Sbjct: 805 NVALGYHVGSVSATTMD 821
Score = 29.3 bits (64), Expect = 6.8, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Query: 22 LDYETIKEYNLTIRVENNGA---QQLASEATVHIILEDVNDEIPLFTEREQETVLEGEPI 78
+D E + LT++ + + + V I++ D+ND +P+F + I
Sbjct: 1484 IDREFANLFELTVKANDQAVPIETRRYALKNVTILVTDLNDNVPMFISQNALAADPSAMI 1543
Query: 79 GSKVTQVNAIDKD 91
GS +T + A D D
Sbjct: 1544 GSVLTTIMAADPD 1556
>sp|Q5DRD4|PCDBI_PANTR Protocadherin beta-18 OS=Pan troglodytes GN=PCDHB18 PE=3 SV=1
Length = 788
Score = 48.9 bits (115), Expect = 9e-06, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 20 HPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQET-VLEGEPI 78
HPLD E EYN+TI V + G +L ++ + +++ DVND P FT+ V E
Sbjct: 408 HPLDREVRNEYNITITVTDLGTPRLKTQHNITVLVSDVNDNAPAFTQTSYTLFVRENNSP 467
Query: 79 GSKVTQVNAIDKD 91
+ V+A D+D
Sbjct: 468 ALHIGSVSATDRD 480
Score = 37.0 bits (84), Expect = 0.032, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQ-------ETVLE 74
LDYE ++ + + + G+ L+SEA V +++ D ND P Q E V
Sbjct: 520 LDYEALQAFEFHVGATDRGSPALSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPR 579
Query: 75 GEPIGSKVTQVNAIDKD 91
G VT+V A+D D
Sbjct: 580 AAEPGYLVTKVVAVDGD 596
Score = 34.7 bits (78), Expect = 0.19, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 13 WADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQET- 71
+ ++ ++ LD E + +LT+ + G+ + +++++ D+ND P F + E
Sbjct: 191 YPELVLDQSLDREKESQLSLTLTAVDGGSPPRSGTTLINVVVLDINDNAPEFEKPVYEVH 250
Query: 72 VLEGEPIGSKVTQVNAIDKDG 92
V E P+ S + + +A D D
Sbjct: 251 VPESSPLDSLIIKASATDLDA 271
>sp|P33150|CAD13_CHICK Cadherin-13 OS=Gallus gallus GN=CDH13 PE=1 SV=1
Length = 712
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 14 ADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQ-ETV 72
D+ V PLD E I Y L + V + + + + I + D ND P+F E V
Sbjct: 195 GDVSVTRPLDREAIANYELEVEVTDLSGKIIDGPVRLDISVIDQNDNRPMFKEGPYVGHV 254
Query: 73 LEGEPIGSKVTQVNAIDKDGTFPNNQLL 100
+EG P G+ V ++ A D D +N LL
Sbjct: 255 MEGSPTGTTVMRMTAFDADDPSTDNALL 282
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 45/87 (51%), Gaps = 16/87 (18%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNG------AQQLASEATVHIILEDVNDEIPLF----- 64
+ V PLDYE + L I+VEN A +S ATV I +EDVN E P+F
Sbjct: 424 LSVVKPLDYEISAFHTLLIKVENEDPLIPDIAYGPSSTATVQITVEDVN-EGPVFHPNPM 482
Query: 65 TEREQETVLEGEPIGSKVTQVNAIDKD 91
T +QE + PIGS V VNA D D
Sbjct: 483 TVTKQENI----PIGSIVLTVNATDPD 505
Score = 35.8 bits (81), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 22 LDYETIK--EYNLTIRVENNGAQQ--LASEATVHIILEDVNDEIPLFTERE-QETVLEG 75
LD ET++ +Y L I ++ G L AT I+++D ND P FT++E Q TV EG
Sbjct: 317 LDRETMETPKYELVIEAKDMGGHDVGLTGTATATILIDDKNDHPPEFTKKEFQATVKEG 375
>sp|O95206|PCDH8_HUMAN Protocadherin-8 OS=Homo sapiens GN=PCDH8 PE=2 SV=2
Length = 1070
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/85 (38%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Query: 8 YLLFTWADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTER 67
YL+ T A LD E I EYNLT+ E+ GA L + + + D ND PLFT
Sbjct: 447 YLVVTAAS------LDRERIAEYNLTLVAEDRGAPPLRTVRPYTVRVGDENDNAPLFTRP 500
Query: 68 EQE-TVLEGEPIGSKVTQVNAIDKD 91
E +V E P G+ + V A D+D
Sbjct: 501 VYEVSVRENNPPGAYLATVAARDRD 525
Score = 37.7 bits (86), Expect = 0.019, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 27/43 (62%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLF 64
DYET+++ ++ I+ + G+ QL+S A V + + D ND P+
Sbjct: 567 FDYETLRQLDVRIQASDGGSPQLSSSALVQVRVLDQNDHAPVL 609
Score = 35.8 bits (81), Expect = 0.082, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Query: 14 ADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETV- 72
AD+ + LD E+ Y+L + ++ G ++ A + + + D ND P F + V
Sbjct: 195 ADLVLLQELDRESQAAYSLELVAQDGGRPPRSATAALSVRVLDANDHSPAFPQGAVAEVE 254
Query: 73 -LEGEPIGSKVTQVNAIDKD 91
E P+GS + ++A D D
Sbjct: 255 LAEDAPVGSLLLDLDAADPD 274
Score = 34.3 bits (77), Expect = 0.23, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 21 PLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIP 62
P+DYE Y L +R ++ G A+ V + + DVND P
Sbjct: 311 PVDYERQDTYELDVRAQDRGPGPRAATCKVIVRIRDVNDNAP 352
>sp|Q5DRE9|PCDA3_PANTR Protocadherin alpha-3 OS=Pan troglodytes GN=PCDHA3 PE=3 SV=1
Length = 950
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 18 VNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQET-VLEGE 76
++ PLD E++ Y L + + G+ L + A+V + + DVND P F++ E V E
Sbjct: 409 LDSPLDRESVSAYELVVTARDGGSPSLWATASVSVEVADVNDNAPAFSQSEYTVFVKENN 468
Query: 77 PIGSKVTQVNAIDKDG 92
P G + V+A D D
Sbjct: 469 PPGCHIFTVSARDADA 484
Score = 38.1 bits (87), Expect = 0.015, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIP-LFTEREQETVLE 74
I V +D+E K Y + + + G ++ TV + + D+ND +P L VLE
Sbjct: 302 ISVKGNIDFEESKSYEIQVEATDKGNPPMSDHCTVLLEIVDINDNVPELVIHSLSLPVLE 361
Query: 75 GEPIGSKVTQVNAIDKD 91
P+ + + ++ D+D
Sbjct: 362 DSPLSTVIALISVSDRD 378
Score = 35.0 bits (79), Expect = 0.14, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTERE--QETVLEGEPIG 79
L+ E ++ L I + G +L + I + DVND P F ER + +LE P G
Sbjct: 200 LNREDTPKHYLLITAIDGGKPELTGTTQLKITVLDVNDNAPAF-ERTIYKVRLLENAPNG 258
Query: 80 SKVTQVNAIDKD 91
+ V VNA D D
Sbjct: 259 TLVVTVNATDLD 270
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 33/83 (39%), Gaps = 8/83 (9%)
Query: 20 HPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIP-LFTER-------EQET 71
PLD+E ++ + + G L S T+ + + D ND P L R E
Sbjct: 521 QPLDHEELELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPALLMPRVGGIGGAVSEL 580
Query: 72 VLEGEPIGSKVTQVNAIDKDGTF 94
V G V +V A+D D +
Sbjct: 581 VPRSVGAGHVVAKVRAVDADSGY 603
>sp|O75309|CAD16_HUMAN Cadherin-16 OS=Homo sapiens GN=CDH16 PE=1 SV=1
Length = 829
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 14 ADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE-TV 72
++ V LD E EY L +R +N+ + A+ +H+++ D ND +P+ R+ ++
Sbjct: 286 GNLYVTRELDREAQAEYLLQVRAQNSHGEDYAAPLELHVLVMDENDNVPICPPRDPTVSI 345
Query: 73 LEGEPIGSKVTQVNAIDKDGT-FPNNQLL 100
E P G++VT+++A D D PN+ ++
Sbjct: 346 PELSPPGTEVTRLSAEDADAPGSPNSHVV 374
Score = 30.0 bits (66), Expect = 4.9, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 18 VNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTE 66
V LD E EY L + +E L V + ++D ND++P F++
Sbjct: 80 VTRALDREEQAEYQLQVTLEMQDGHVLWGPQPVLVHVKDENDQVPHFSQ 128
>sp|Q9Y5H8|PCDA3_HUMAN Protocadherin alpha-3 OS=Homo sapiens GN=PCDHA3 PE=2 SV=1
Length = 950
Score = 47.8 bits (112), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 18 VNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQET-VLEGE 76
++ PLD E++ Y L + + G+ L + A+V + + DVND P F++ E V E
Sbjct: 409 LDSPLDRESVSAYELVVTARDGGSPSLWATASVSVEVADVNDNAPAFSQSEYTVFVKENN 468
Query: 77 PIGSKVTQVNAIDKDG 92
P G + V+A D D
Sbjct: 469 PPGCHIFTVSARDADA 484
Score = 38.9 bits (89), Expect = 0.009, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIP-LFTEREQETVLE 74
I V +D+E K Y + + + G ++ TV + + D+ND +P L + VLE
Sbjct: 302 ISVKGNIDFEESKSYEIQVEATDKGNPPMSDHCTVLLEIVDINDNVPELVIQSLSLPVLE 361
Query: 75 GEPIGSKVTQVNAIDKD 91
P+ + + ++ D+D
Sbjct: 362 DSPLSTVIALISVSDRD 378
Score = 35.0 bits (79), Expect = 0.14, Method: Composition-based stats.
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Query: 22 LDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTERE--QETVLEGEPIG 79
L+ E ++ L I + G +L + I + DVND P F ER + +LE P G
Sbjct: 200 LNREDTPKHYLLITAIDGGKPELTGTTQLKITVLDVNDNAPAF-ERTIYKVRLLENAPNG 258
Query: 80 SKVTQVNAIDKD 91
+ V VNA D D
Sbjct: 259 TLVVTVNATDLD 270
Score = 30.8 bits (68), Expect = 2.7, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 33/83 (39%), Gaps = 8/83 (9%)
Query: 20 HPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIP-LFTER-------EQET 71
PLD+E ++ + + G L S T+ + + D ND P L R E
Sbjct: 521 QPLDHEELELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPALLMPRVGGIGGAVSEL 580
Query: 72 VLEGEPIGSKVTQVNAIDKDGTF 94
V G V +V A+D D +
Sbjct: 581 VPRSVGAGHVVAKVRAVDADSGY 603
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.135 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,573,694
Number of Sequences: 539616
Number of extensions: 1360955
Number of successful extensions: 4610
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 282
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 2877
Number of HSP's gapped (non-prelim): 1538
length of query: 102
length of database: 191,569,459
effective HSP length: 71
effective length of query: 31
effective length of database: 153,256,723
effective search space: 4750958413
effective search space used: 4750958413
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 55 (25.8 bits)