Query psy11095
Match_columns 102
No_of_seqs 154 out of 1265
Neff 9.1
Searched_HMMs 29240
Date Fri Aug 16 17:50:46 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11095.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11095hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qrb_A Cadherin-1; cell adhesi 99.9 1.7E-24 5.9E-29 141.5 12.7 87 7-93 50-138 (213)
2 2qvi_A Cadherin-2; beta barrel 99.9 8.2E-25 2.8E-29 143.4 10.9 95 6-100 49-146 (215)
3 3k5r_A Cadherin 13; mouse, str 99.9 7.7E-25 2.6E-29 143.6 9.9 96 6-101 49-147 (218)
4 3ppe_A Vascular endothelial ca 99.9 1E-23 3.4E-28 137.1 12.9 96 6-101 45-144 (203)
5 2a4e_A Cadherin-11; dimer, cal 99.9 2.8E-23 9.5E-28 136.1 13.1 94 6-99 47-145 (215)
6 3lnd_A CDH6 protein, cadherin 99.9 1.5E-23 5.2E-28 136.5 8.4 94 7-100 47-145 (207)
7 3mvs_A Cadherin-23, otocadheri 99.9 6.2E-22 2.1E-26 129.1 10.8 91 6-100 53-145 (210)
8 3q2w_A Cadherin-2; cell adhesi 99.9 6.6E-22 2.2E-26 144.3 12.0 94 7-100 50-146 (559)
9 2a62_A Cadherin-8; extracellul 99.9 1.3E-21 4.4E-26 134.8 11.2 95 6-100 153-252 (322)
10 1l3w_A EP-cadherin, C-cadherin 99.9 7.1E-21 2.4E-25 138.6 12.7 94 7-100 56-153 (546)
11 2x2u_A Proto-oncogene tyrosine 99.8 4.4E-23 1.5E-27 137.5 -0.3 93 6-99 56-174 (246)
12 3q2v_A Cadherin-1; cell adhesi 99.8 5.6E-21 1.9E-25 139.2 10.4 87 7-93 50-138 (550)
13 3ubf_A Neural-cadherin; cell a 99.8 1.6E-20 5.5E-25 128.8 11.5 90 5-94 41-139 (316)
14 2a62_A Cadherin-8; extracellul 99.8 2.3E-21 7.9E-26 133.5 6.2 88 6-93 47-136 (322)
15 1q55_A EP-cadherin, C-cadherin 99.8 3.2E-20 1.1E-24 141.1 12.7 94 7-100 205-302 (880)
16 3ubh_A Neural-cadherin; cell a 99.8 8.7E-20 3E-24 129.2 13.2 91 4-94 45-144 (419)
17 3ubh_A Neural-cadherin; cell a 99.8 2.5E-19 8.4E-24 126.9 12.0 92 6-99 263-360 (419)
18 1l3w_A EP-cadherin, C-cadherin 99.8 7.9E-20 2.7E-24 133.1 8.6 94 6-100 167-264 (546)
19 3ubf_A Neural-cadherin; cell a 99.8 2.4E-19 8.1E-24 123.0 10.5 85 6-91 152-242 (316)
20 3q2v_A Cadherin-1; cell adhesi 99.8 2.8E-18 9.7E-23 125.0 14.2 88 11-99 277-368 (550)
21 3q2w_A Cadherin-2; cell adhesi 99.8 1.4E-18 4.6E-23 126.9 10.7 87 7-94 161-253 (559)
22 1q55_A EP-cadherin, C-cadherin 99.8 5.9E-19 2E-23 134.2 8.6 94 6-100 316-413 (880)
23 4apx_B Protocadherin-15, otoca 99.8 3.5E-18 1.2E-22 113.7 9.1 95 6-101 63-169 (242)
24 1ncg_A N-cadherin; cell adhesi 99.7 8.1E-18 2.8E-22 99.8 7.0 59 6-64 51-110 (110)
25 2yqg_A Desmoglein-2, HDGC; cad 99.7 1.4E-17 4.8E-22 100.6 7.5 61 6-66 62-122 (123)
26 2yst_A Protocadherin-7; BH-PCD 99.6 2.5E-15 8.6E-20 90.0 7.2 57 6-62 62-119 (119)
27 2x2u_A Proto-oncogene tyrosine 99.6 1.1E-14 3.8E-19 96.9 7.6 62 5-66 183-246 (246)
28 1wyj_A Protocadherin beta 14; 99.5 4.7E-15 1.6E-19 89.7 3.6 62 6-70 55-121 (125)
29 3k6f_A T-cadherin; cell adhesi 99.4 8.1E-13 2.8E-17 76.9 7.7 51 6-56 49-100 (100)
30 2a4e_A Cadherin-11; dimer, cal 99.4 5.9E-13 2E-17 87.0 7.5 58 6-63 154-215 (215)
31 2omz_B Epithelial-cadherin; le 99.4 7.8E-13 2.7E-17 77.7 7.3 51 7-57 54-105 (105)
32 3k6i_A T-cadherin; cell adhesi 99.4 1.4E-12 4.9E-17 75.7 8.2 50 7-56 49-99 (99)
33 3k6d_A T-cadherin; cell adhesi 99.4 1.2E-12 4E-17 76.1 7.7 51 6-56 48-99 (99)
34 1zvn_A Mn-cadherin; strand dim 99.4 2.4E-12 8.3E-17 74.9 7.6 51 6-56 47-99 (99)
35 1zxk_A Cadherin-8; strand dime 99.4 2.3E-12 7.9E-17 74.8 7.3 50 7-56 47-98 (98)
36 2ee0_A Protocadherin-9; Ca dom 99.4 1.9E-13 6.6E-18 81.3 2.3 49 52-100 2-51 (114)
37 3mvs_A Cadherin-23, otocadheri 99.3 8.3E-12 2.8E-16 81.1 9.4 57 5-61 152-210 (210)
38 2yst_A Protocadherin-7; BH-PCD 99.3 5.8E-13 2E-17 79.6 1.6 47 52-99 2-49 (119)
39 2ee0_A Protocadherin-9; Ca dom 99.3 1.8E-11 6.2E-16 72.7 7.3 51 6-58 63-114 (114)
40 3ppe_A Vascular endothelial ca 99.0 2.3E-09 7.8E-14 69.3 8.4 51 6-56 151-203 (203)
41 3qrb_A Cadherin-1; cell adhesi 99.0 2.2E-09 7.7E-14 69.6 7.0 51 6-56 161-213 (213)
42 3lnd_A CDH6 protein, cadherin 98.9 3.3E-09 1.1E-13 68.6 6.0 51 6-56 153-207 (207)
43 2qvi_A Cadherin-2; beta barrel 98.9 4.8E-09 1.6E-13 68.3 6.0 52 5-56 159-215 (215)
44 1wuz_A Pcdha4 protein, CNR-EC1 98.9 1.2E-08 4.2E-13 59.4 7.0 50 6-60 47-103 (103)
45 3k5r_A Cadherin 13; mouse, str 98.8 2.1E-08 7.1E-13 65.3 8.2 51 6-56 160-218 (218)
46 4apx_B Protocadherin-15, otoca 98.7 3.7E-08 1.3E-12 65.3 6.7 50 7-56 183-237 (242)
47 2yqg_A Desmoglein-2, HDGC; cad 96.6 6.3E-05 2.2E-09 44.7 -3.4 43 57-100 5-48 (123)
48 3k6d_A T-cadherin; cell adhesi 96.1 0.0026 8.7E-08 36.2 1.8 23 70-92 7-31 (99)
49 1zvn_A Mn-cadherin; strand dim 96.1 0.0022 7.5E-08 36.6 1.5 29 70-101 8-38 (99)
50 3k6f_A T-cadherin; cell adhesi 95.9 0.0053 1.8E-07 34.9 2.7 23 70-92 8-32 (100)
51 1zxk_A Cadherin-8; strand dime 95.8 0.0033 1.1E-07 35.8 1.5 29 70-101 7-37 (98)
52 3k6i_A T-cadherin; cell adhesi 95.6 0.009 3.1E-07 33.9 2.9 23 70-92 7-31 (99)
53 1wyj_A Protocadherin beta 14; 94.8 0.0083 2.8E-07 35.6 1.0 23 70-93 15-37 (125)
54 1wuz_A Pcdha4 protein, CNR-EC1 91.7 0.011 3.7E-07 33.8 -2.0 23 70-93 7-29 (103)
55 1ncg_A N-cadherin; cell adhesi 87.6 0.26 8.9E-06 28.2 1.7 21 70-93 9-31 (110)
56 2omz_B Epithelial-cadherin; le 80.5 1 3.5E-05 25.4 2.1 18 70-87 11-30 (105)
57 2kpn_A Bacillolysin; solution 78.8 7 0.00024 22.2 6.1 41 16-58 47-87 (103)
58 2yhg_A SDE_182CT, cellulose-bi 75.6 15 0.0005 26.3 7.2 40 14-54 397-436 (437)
59 2yrl_A KIAA1837 protein; PKD d 74.8 8.9 0.0003 21.4 6.0 31 26-58 67-97 (102)
60 1op4_A Neural-cadherin; beta s 71.8 15 0.0005 22.6 5.9 34 7-41 78-111 (159)
61 3pdd_A Glycoside hydrolase, fa 70.8 16 0.00055 22.7 6.1 60 26-92 59-122 (190)
62 2y72_A Collagenase, collagenas 56.6 21 0.0007 19.0 4.9 30 24-55 55-84 (85)
63 3pe9_A Fibronectin(III)-like m 38.7 51 0.0017 18.3 4.8 29 27-56 60-88 (98)
64 2w1n_A O-GLCNACASE NAGJ; hexos 36.3 89 0.003 20.5 5.0 28 25-53 208-235 (238)
65 3v9f_A Two-component system se 28.2 85 0.0029 23.3 4.5 28 27-54 747-774 (781)
66 3ott_A Two-component system se 27.5 57 0.002 24.1 3.5 29 27-55 719-747 (758)
67 1fjj_A Hypothetical 17.1 kDa p 24.6 88 0.003 18.8 3.4 20 75-94 39-58 (159)
68 4a2l_A BT_4663, two-component 24.4 86 0.0029 23.3 4.0 28 27-54 753-780 (795)
69 1fux_A Hypothetical 19.5 kDa p 23.5 94 0.0032 18.9 3.4 20 75-94 40-59 (166)
70 1wgo_A VPS10 domain-containing 22.9 1.1E+02 0.0039 17.8 3.5 29 24-55 90-118 (123)
71 2dmk_A Midline 2 isoform 2; mi 22.9 1.1E+02 0.0036 17.0 3.6 18 25-42 88-105 (127)
72 2gzq_A Phosphatidylethanolamin 22.4 1.1E+02 0.0038 19.1 3.7 21 75-95 71-91 (200)
73 3n08_A Putative phosphatidylet 22.2 69 0.0024 19.3 2.6 20 75-94 36-55 (153)
74 2lv4_A Putative outer membrane 20.8 39 0.0013 20.1 1.2 31 31-61 49-79 (146)
No 1
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=99.92 E-value=1.7e-24 Score=141.47 Aligned_cols=87 Identities=30% Similarity=0.428 Sum_probs=81.6
Q ss_pred cEEECC-ceeEEEcCcCCcccCCEEEEEEEEEECCCCCceeeEEEEEEEecCCCCCcEeecCcce-EEeCCCCCCcEEEE
Q psy11095 7 CYLLFT-WADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE-TVLEGEPIGSKVTQ 84 (102)
Q Consensus 7 ~f~~~~-~G~i~~~~~LD~E~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d~Nd~~P~f~~~~~~-~v~E~~~~g~~v~~ 84 (102)
.|.+++ +|.|++.++||||....|.|.|.|.|.+++++++.+.|+|.|.|+|||+|.|....|. .|+|+.++|+.|++
T Consensus 50 ~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~ 129 (213)
T 3qrb_A 50 VFIIERETGWLKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGAVPGTSVMK 129 (213)
T ss_dssp SEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTSCBCSCCEEEEEEEECCSCCCCEESCSEEEEEEETTCCTTCEEEE
T ss_pred eEEEECCCCEEEECCccCcccCceEEEEEEEEeCCCCcccceEEEEEEEEEccCCCCccCCCceEEEEECCCCCCcEEEE
Confidence 555654 6999999999999999999999999999988889999999999999999999998886 99999999999999
Q ss_pred EEEEeCCCC
Q psy11095 85 VNAIDKDGT 93 (102)
Q Consensus 85 v~a~D~D~~ 93 (102)
+.|+|+|.+
T Consensus 130 v~A~D~D~~ 138 (213)
T 3qrb_A 130 VSATDADDD 138 (213)
T ss_dssp CCEECCSCT
T ss_pred EEEEeCCCC
Confidence 999999998
No 2
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=99.92 E-value=8.2e-25 Score=143.38 Aligned_cols=95 Identities=27% Similarity=0.362 Sum_probs=85.5
Q ss_pred ccEEEC-CceeEEEcCcCCcccCCEEEEEEEEEECCCCCceeeEEEEEEEecCCCCCcEeecCcce-EEeCCCCCCcEEE
Q psy11095 6 LCYLLF-TWADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE-TVLEGEPIGSKVT 83 (102)
Q Consensus 6 ~~f~~~-~~G~i~~~~~LD~E~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d~Nd~~P~f~~~~~~-~v~E~~~~g~~v~ 83 (102)
..|.++ .+|.|+++++||||....|.|.|.|.|.+++++++.+.|.|.|.|+|||+|.|....|. .|+|+.++|+.|+
T Consensus 49 ~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~ 128 (215)
T 2qvi_A 49 GIFIINPISGQLSVTKPLDRELIARFHLRAHAVDINGNQVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTYVM 128 (215)
T ss_dssp SSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTTCCCEEEEEEEEEEECCCCCCCBCSSSEEEEEECSSCCTTCEEE
T ss_pred CcEEEeCCccEEEECcccCcccCCeEEEEEEEEECCCCceeeeEEEEEEEeECCCCCCcccCceeEEEEeCCCCCCCEEE
Confidence 456666 57999999999999999999999999999998999999999999999999999998886 9999999999999
Q ss_pred EEEEEeCCCC-CCCceEE
Q psy11095 84 QVNAIDKDGT-FPNNQLL 100 (102)
Q Consensus 84 ~v~a~D~D~~-~~~~~~~ 100 (102)
++.|+|+|.+ +.|+.+.
T Consensus 129 ~v~A~D~D~~~g~n~~i~ 146 (215)
T 2qvi_A 129 TVTAIDADDPNALNGMLR 146 (215)
T ss_dssp ECCCBCSSCTTSTTTCCC
T ss_pred EEEEEeCCCCCCCCcEEE
Confidence 9999999984 4555543
No 3
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=99.92 E-value=7.7e-25 Score=143.58 Aligned_cols=96 Identities=28% Similarity=0.431 Sum_probs=85.9
Q ss_pred ccEEECC-ceeEEEcCcCCcccCCEEEEEEEEEECCCCCceeeEEEEEEEecCCCCCcEeecCcce-EEeCCCCCCcEEE
Q psy11095 6 LCYLLFT-WADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE-TVLEGEPIGSKVT 83 (102)
Q Consensus 6 ~~f~~~~-~G~i~~~~~LD~E~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d~Nd~~P~f~~~~~~-~v~E~~~~g~~v~ 83 (102)
..|.+++ +|.|++.++||||....|.|.|.|.|.+++++++.+.|+|.|.|+|||+|.|....|. .|+|+.++|+.|+
T Consensus 49 ~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~ 128 (218)
T 3k5r_A 49 GTFRINENTGSVSVTRTLDRETIATYQLYVETTDASGKTLEGPVPLEVIVIDQNDNRPIFREGPYIGHVMEGSPTGTTVM 128 (218)
T ss_dssp TSEEECTTTCEEEECSCCCTTTCSEEEEEEEEECSSSCEEEEEEEEEEEEECTTCCCCCCCSCSEEEEEETTCCTTCEEE
T ss_pred CeEEEeCCceEEEECCcCCcccCCEEEEEEEEEECCCCceeeeEEEEEEEEeCCCCCCcccCCceEEEEECCCCCCCEEE
Confidence 4566665 7999999999999999999999999999988999999999999999999999998886 9999999999999
Q ss_pred EEEEEeCCCC-CCCceEEe
Q psy11095 84 QVNAIDKDGT-FPNNQLLD 101 (102)
Q Consensus 84 ~v~a~D~D~~-~~~~~~~~ 101 (102)
+|.|+|+|.+ +.|+.+.+
T Consensus 129 ~v~A~D~D~~~g~n~~i~Y 147 (218)
T 3k5r_A 129 RMTAFDADDPATDNALLRY 147 (218)
T ss_dssp ECCCSCSSSSCGGGGCEEE
T ss_pred EEEEEeCCCCCCCCcEEEE
Confidence 9999999994 35555543
No 4
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=99.91 E-value=1e-23 Score=137.10 Aligned_cols=96 Identities=26% Similarity=0.311 Sum_probs=83.6
Q ss_pred ccEEECCceeEEEcCcCCcccCCEEEEEEEEEECCCC-CceeeEEEEEEEecCCCCCcEeecCcce-EEeCCCCCCcEEE
Q psy11095 6 LCYLLFTWADIKVNHPLDYETIKEYNLTIRVENNGAQ-QLASEATVHIILEDVNDEIPLFTEREQE-TVLEGEPIGSKVT 83 (102)
Q Consensus 6 ~~f~~~~~G~i~~~~~LD~E~~~~~~l~v~a~d~~~~-~~~~~~~v~i~v~d~Nd~~P~f~~~~~~-~v~E~~~~g~~v~ 83 (102)
.|.+.+.+|.|+++++||||....|.|.|.|.|.+.+ ++++.+.++|.|.|+|||+|.|....|. .|+|+.++|+.|+
T Consensus 45 ~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~g~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~ 124 (203)
T 3ppe_A 45 IFKVQGYDGDIYAFERLDREKKAEYELTAHIIDRRNNRSLEPPSKFIIKVSDINDNAPIFVQKIFNGSVPEMSRLGTSVT 124 (203)
T ss_dssp TEEEETTTTEEEESSCCCTTTCCEEEEEEEEEETTTTEECSCCEEEEEEEECCCCCCCEESCSEEEEEEETTCCTTCEEE
T ss_pred eEEEECCcCEEEECccccccccceEEEEEEEEECCCCCcccceEEEEEEEcCCCCCCCCccCCccEEEEeccCCCCcEEE
Confidence 4555556799999999999999999999999999876 5788899999999999999999999886 9999999999999
Q ss_pred EEEEEeCCCC--CCCceEEe
Q psy11095 84 QVNAIDKDGT--FPNNQLLD 101 (102)
Q Consensus 84 ~v~a~D~D~~--~~~~~~~~ 101 (102)
++.|+|+|.+ +.|+.+.+
T Consensus 125 ~v~A~D~D~~~~g~n~~i~Y 144 (203)
T 3ppe_A 125 KVTAEDADDPTVAGHATVTY 144 (203)
T ss_dssp ECCEECCSCTTSSSTTCEEE
T ss_pred EEEEEcCCCcCCCCceEEEE
Confidence 9999999963 24554443
No 5
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=99.91 E-value=2.8e-23 Score=136.14 Aligned_cols=94 Identities=23% Similarity=0.341 Sum_probs=82.8
Q ss_pred ccEEECC-ceeEEEcCcCCcccCCEEEEEEEEEECCC-CCceeeEEEEEEEecCCCCCcEeecCcce-EEeCCCCCCcEE
Q psy11095 6 LCYLLFT-WADIKVNHPLDYETIKEYNLTIRVENNGA-QQLASEATVHIILEDVNDEIPLFTEREQE-TVLEGEPIGSKV 82 (102)
Q Consensus 6 ~~f~~~~-~G~i~~~~~LD~E~~~~~~l~v~a~d~~~-~~~~~~~~v~i~v~d~Nd~~P~f~~~~~~-~v~E~~~~g~~v 82 (102)
..|.+++ +|.|++.++||||....|.|.|.|.|.+. +++++.+.|.|.|.|+|||+|.|.+..|. .|+|+.++|+.|
T Consensus 47 ~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~Gt~v 126 (215)
T 2a4e_A 47 TIFVIDDKSGNIHATKTLDREERAQYTLMAQAVDRDTNRPLEPPSEFIVKVQDINDNPPEFLHEIYHANVPERSNVGTSV 126 (215)
T ss_dssp TTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTTCCEEEEEEEEEEEEECCCCCCCEESSSSEEEEEETTCCTTCEE
T ss_pred CeEEEECCceEEEECCccCCccCCEEEEEEEEEECCCCCcccccEEEEEEEeeCCCCCCCccCCceEEEEECCCCCCCEE
Confidence 3566665 79999999999999999999999999875 56888899999999999999999998886 999999999999
Q ss_pred EEEEEEeCCCC--CCCceE
Q psy11095 83 TQVNAIDKDGT--FPNNQL 99 (102)
Q Consensus 83 ~~v~a~D~D~~--~~~~~~ 99 (102)
+++.|+|+|.+ +.|+.+
T Consensus 127 ~~v~A~D~D~~~~G~n~~i 145 (215)
T 2a4e_A 127 IQVTASDADDPTYGNSAKL 145 (215)
T ss_dssp EECCEECSSCTTTCSSSCC
T ss_pred EEEEEEECCCCCCCCceEE
Confidence 99999999973 244443
No 6
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=99.90 E-value=1.5e-23 Score=136.49 Aligned_cols=94 Identities=28% Similarity=0.373 Sum_probs=78.6
Q ss_pred cEEECC-ceeEEEcCcCCcccCCEEEEEEEEEECC-CCCceeeEEEEEEEecCCCCCcEeecCcce-EEeCCCCCCcEEE
Q psy11095 7 CYLLFT-WADIKVNHPLDYETIKEYNLTIRVENNG-AQQLASEATVHIILEDVNDEIPLFTEREQE-TVLEGEPIGSKVT 83 (102)
Q Consensus 7 ~f~~~~-~G~i~~~~~LD~E~~~~~~l~v~a~d~~-~~~~~~~~~v~i~v~d~Nd~~P~f~~~~~~-~v~E~~~~g~~v~ 83 (102)
.|.+++ +|.|++.++||||....|.|.|.|.|.+ .+++++.+.+.|.|.|+|||+|.|.+..|. .|+|+.++|+.|+
T Consensus 47 ~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~ 126 (207)
T 3lnd_A 47 LFIINENTGDIQATKRLDREEKPVYILRAQAVNRRTGRPVEPESEFIIKIHDINDNEPIFTKDVYTATVPEMADVGTFVV 126 (207)
T ss_dssp TEEECTTTCEEEECSCCCGGGCCEEEC----CBSSSCCCCSCCCCCEEEEECCSCCCCEESCSEEEEEEESSCCTTCEEE
T ss_pred eEEEECCceEEEECCCcCcccCCEEEEEEEEEECCCCCccccEEEEEEEECccCCCCCccCCCceEEEEeCCCCCCCEEE
Confidence 566655 7999999999999999999999999987 467888899999999999999999998886 9999999999999
Q ss_pred EEEEEeCCCC--CCCceEE
Q psy11095 84 QVNAIDKDGT--FPNNQLL 100 (102)
Q Consensus 84 ~v~a~D~D~~--~~~~~~~ 100 (102)
++.|+|+|.+ +.++.+.
T Consensus 127 ~v~A~D~D~~~~g~n~~i~ 145 (207)
T 3lnd_A 127 QVTATDADDPTYGNSAKVV 145 (207)
T ss_dssp ECCEECSSCTTSSSTTCCE
T ss_pred EEEEEeCCCCCCCCCcEEE
Confidence 9999999983 2444443
No 7
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=99.87 E-value=6.2e-22 Score=129.13 Aligned_cols=91 Identities=26% Similarity=0.392 Sum_probs=79.6
Q ss_pred ccEEECC-ceeEEEcCcCCcccCCEEEEEEEEEECCCCCceeeEEEEEEEecCCCCCcEeecCcce-EEeCCCCCCcEEE
Q psy11095 6 LCYLLFT-WADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE-TVLEGEPIGSKVT 83 (102)
Q Consensus 6 ~~f~~~~-~G~i~~~~~LD~E~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d~Nd~~P~f~~~~~~-~v~E~~~~g~~v~ 83 (102)
.+|.+++ +|.|+++++||||....|.|.|.|.|.++ ...+.+.|.|.|+|||+|.|....|. .|+|+.++|+.|+
T Consensus 53 ~~F~Id~~tG~i~~~~~LD~E~~~~y~l~v~a~D~~~---~~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~gt~v~ 129 (210)
T 3mvs_A 53 RFFAVEPDTGVVWLRQPLDRETKSEFTVEFSVSDHQG---VITRKVNIQVGDVNDNAPTFHNQPYSVRIPENTPVGTPIF 129 (210)
T ss_dssp HHEEECTTTCEEEESSCCCTTTCCEEEEEEEEECSSC---EEEEEEEEEEECCCCCCCEECSCSEEEEEETTCCTTCEEE
T ss_pred CcEEEeCCCCEEEECCccCCcccceEEEEEEEEeCCC---CEEEEEEEEEEeCCCCCCcCCCceEEEEEECCCCCCCEEE
Confidence 3566665 69999999999999999999999999765 35678999999999999999998886 9999999999999
Q ss_pred EEEEEeCCCCCCCceEE
Q psy11095 84 QVNAIDKDGTFPNNQLL 100 (102)
Q Consensus 84 ~v~a~D~D~~~~~~~~~ 100 (102)
++.|+|+|.|. ++.+.
T Consensus 130 ~v~A~D~D~g~-n~~v~ 145 (210)
T 3mvs_A 130 IVNATDPDLGA-GGSVL 145 (210)
T ss_dssp ECCEECCSSGG-GGCEE
T ss_pred EEEEEeCCCCC-CceEE
Confidence 99999999984 44443
No 8
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=99.87 E-value=6.6e-22 Score=144.30 Aligned_cols=94 Identities=28% Similarity=0.382 Sum_probs=84.8
Q ss_pred cEEEC-CceeEEEcCcCCcccCCEEEEEEEEEECCCCCceeeEEEEEEEecCCCCCcEeecCcce-EEeCCCCCCcEEEE
Q psy11095 7 CYLLF-TWADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE-TVLEGEPIGSKVTQ 84 (102)
Q Consensus 7 ~f~~~-~~G~i~~~~~LD~E~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d~Nd~~P~f~~~~~~-~v~E~~~~g~~v~~ 84 (102)
.|.++ .+|.|++.++||||....|.|.+.|.|.+++.++..+.++|.|.|+|||+|.|.+..|. .|+|++++|+.|++
T Consensus 50 ~F~id~~tG~l~~~~~LDrE~~~~y~l~v~a~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~Gt~v~~ 129 (559)
T 3q2w_A 50 IFIINPISGQLSVTKPLDRELIARFHLRAHAVDINGNQVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTYVMT 129 (559)
T ss_dssp SEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTSCEEEEEEEEEEEEECCCCCCCEESCSEEEEEEETTCCTTCEEEE
T ss_pred eEEEeCCceEEEECCccCCCCCceEEEEEEEEECCCCccceeEEEEEEEEeCCCCCCccCCCeeEEEEeCCCCCCcEEEE
Confidence 45555 57999999999999999999999999999888889999999999999999999999886 99999999999999
Q ss_pred EEEEeCCCC-CCCceEE
Q psy11095 85 VNAIDKDGT-FPNNQLL 100 (102)
Q Consensus 85 v~a~D~D~~-~~~~~~~ 100 (102)
+.|+|+|.+ +.|+.+.
T Consensus 130 v~A~D~D~g~~~n~~v~ 146 (559)
T 3q2w_A 130 VTAIDADDPNALNGMLR 146 (559)
T ss_dssp CCEECSSCTTSGGGCCE
T ss_pred EEEEcCCCCCCCceEEE
Confidence 999999987 3455443
No 9
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=99.87 E-value=1.3e-21 Score=134.77 Aligned_cols=95 Identities=26% Similarity=0.334 Sum_probs=83.8
Q ss_pred ccEEECC-ceeEEEc-CcCCcccCCEEEEEEEEEECCCCC--ceeeEEEEEEEecCCCCCcEeecCcce-EEeCCCCCCc
Q psy11095 6 LCYLLFT-WADIKVN-HPLDYETIKEYNLTIRVENNGAQQ--LASEATVHIILEDVNDEIPLFTEREQE-TVLEGEPIGS 80 (102)
Q Consensus 6 ~~f~~~~-~G~i~~~-~~LD~E~~~~~~l~v~a~d~~~~~--~~~~~~v~i~v~d~Nd~~P~f~~~~~~-~v~E~~~~g~ 80 (102)
.+|.+++ +|.|+++ ++||||....|.|.|.|+|.+.++ +++.+.|+|.|.|+|||+|.|.+..|. .|+|+.++|+
T Consensus 153 ~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~a~D~g~p~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt 232 (322)
T 2a62_A 153 PYFSIEPETAIIKTALPNMDREAKEEYLVVIQAKDMGGHSGGLSGTTTLTVTLTDVNDNPPKFAQSLYHFSVPEDVVLGT 232 (322)
T ss_dssp TTEEECTTTCCEEECSSCCCGGGCSEEEEEEEEEESCSSSSCCBCCEEEEEEECCCCCCCCCCSCSEEEEEECSCCSSCC
T ss_pred CCEEEecCCCEEEecccCCCcccCCeEEEEEEEEECCCCCCCceeEEEEEEEEEecCCCCCeecCCCceeEeECCCCCCc
Confidence 4667765 6999998 899999999999999999998774 889999999999999999999998886 9999999999
Q ss_pred EEEEEEEEeCCCCCCCceEE
Q psy11095 81 KVTQVNAIDKDGTFPNNQLL 100 (102)
Q Consensus 81 ~v~~v~a~D~D~~~~~~~~~ 100 (102)
.|+++.|+|+|.+..+...|
T Consensus 233 ~v~~v~A~D~D~g~n~~i~Y 252 (322)
T 2a62_A 233 AIGRVKANDQDIGENAQSSY 252 (322)
T ss_dssp EEEEEECCCSSCGGGTCCEE
T ss_pred EEEEEEEEeCCCCCCceEEE
Confidence 99999999999984333333
No 10
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=99.86 E-value=7.1e-21 Score=138.56 Aligned_cols=94 Identities=27% Similarity=0.340 Sum_probs=84.4
Q ss_pred cEEEC-CceeEEEcCcCCcccCCEEEEEEEEEECCCCCceeeEEEEEEEecCCCCCcEeecCcce-EEeCCCCCCcEEEE
Q psy11095 7 CYLLF-TWADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE-TVLEGEPIGSKVTQ 84 (102)
Q Consensus 7 ~f~~~-~~G~i~~~~~LD~E~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d~Nd~~P~f~~~~~~-~v~E~~~~g~~v~~ 84 (102)
.|.++ .+|.|+++++||||....|.|.+.|.|.++++++..+.|+|.|.|+|||+|.|....|. .|+|+.++|+.|++
T Consensus 56 ~F~Id~~tG~l~~~~~LDrE~~~~y~l~v~A~D~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~gt~v~~ 135 (546)
T 1l3w_A 56 VFRIEWETGWMLVTRPLDREEYDKYVLSSHAVSENGSPVEEPMEITINVIDQNDNRPKFTQDVFRGSVREGVQPGTQVMA 135 (546)
T ss_dssp SEEECTTTCEEEECSCCCTTTCCEEEEEEEEEESSSCBCSCCEEEEEEEECCSCCCCEESSSCEEEEEETTCCSSEEEEE
T ss_pred eEEEeCCccEEEECCcCCcccCceEEEEEEEEeCCCCcccceEEEEEEEEecccCcCEecCceeEEEEECCCCCCCEEEE
Confidence 56666 57999999999999999999999999999888888899999999999999999999886 99999999999999
Q ss_pred EEEEeCCCCC--CCceEE
Q psy11095 85 VNAIDKDGTF--PNNQLL 100 (102)
Q Consensus 85 v~a~D~D~~~--~~~~~~ 100 (102)
+.|+|+|.+. .|+.+.
T Consensus 136 v~A~D~D~g~~~~n~~v~ 153 (546)
T 1l3w_A 136 VSATDEDDNIDSLNGVLS 153 (546)
T ss_dssp CCEECCSCCSSSSTTCCE
T ss_pred EEEEcCCCCCCCCCCEEE
Confidence 9999999982 444443
No 11
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=99.85 E-value=4.4e-23 Score=137.54 Aligned_cols=93 Identities=12% Similarity=0.080 Sum_probs=78.9
Q ss_pred ccEEEC-CceeEEEcCcCCcccCCEE------------EEEEEEEECCCC--CceeeEEEEEEEecCCCCCcE-------
Q psy11095 6 LCYLLF-TWADIKVNHPLDYETIKEY------------NLTIRVENNGAQ--QLASEATVHIILEDVNDEIPL------- 63 (102)
Q Consensus 6 ~~f~~~-~~G~i~~~~~LD~E~~~~~------------~l~v~a~d~~~~--~~~~~~~v~i~v~d~Nd~~P~------- 63 (102)
..|.++ .+|.|+++++||||....| .|+|.|+|.+.+ ++++.+.|.|.|.|+|||+|.
T Consensus 56 ~~F~Id~~tG~i~~~~~LDrE~~~~y~~~~~G~p~~~~~l~V~a~D~g~~~~~~~~~~~v~I~V~DvNDn~P~~~~~~~~ 135 (246)
T 2x2u_A 56 NWIRIQEDTGLLYLQRSLDHSSWEKLSVRNRGFPLLTVYLKVFLSPTSLREGECQWPGCARVYFSFFNTSFPACSSLKPR 135 (246)
T ss_dssp CSEEECTTTCEEEESSCBCHHHHHHHHHTSTTSCCCEEEEEEECC-------CCCTTTEEEEEEEEESSCCCCGGGCCHH
T ss_pred CEEEECCCcEEEEECCcCChhHhhhhccccCCCcccceEEEEEEEcCCCCCCcccceEEEEEEEEECCCCCCcccccccc
Confidence 456666 5699999999999999999 999999998877 678889999999999999999
Q ss_pred ---eecCcce-EEeCCCCCCcEEEEEEEEeCCCCCCCceE
Q psy11095 64 ---FTEREQE-TVLEGEPIGSKVTQVNAIDKDGTFPNNQL 99 (102)
Q Consensus 64 ---f~~~~~~-~v~E~~~~g~~v~~v~a~D~D~~~~~~~~ 99 (102)
|.+..|. .|+|+.++|+.|+++.|+|+|.| .|+.+
T Consensus 136 ~~~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g-~n~~i 174 (246)
T 2x2u_A 136 ELCFPETRPSFRIRENRPPGTFHQFRLLPVQFLC-PQISV 174 (246)
T ss_dssp HHHSCSSCCCEEEEBTSCCCEEEECSCHHHHHHC-TTSCE
T ss_pred ccccCCCcEEEEEECCCCCCcEEEEEEEEcCCCC-CCcEE
Confidence 9998876 99999999999999999999998 44444
No 12
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=99.85 E-value=5.6e-21 Score=139.20 Aligned_cols=87 Identities=30% Similarity=0.428 Sum_probs=81.2
Q ss_pred cEEEC-CceeEEEcCcCCcccCCEEEEEEEEEECCCCCceeeEEEEEEEecCCCCCcEeecCcce-EEeCCCCCCcEEEE
Q psy11095 7 CYLLF-TWADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE-TVLEGEPIGSKVTQ 84 (102)
Q Consensus 7 ~f~~~-~~G~i~~~~~LD~E~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d~Nd~~P~f~~~~~~-~v~E~~~~g~~v~~ 84 (102)
.|.++ .+|.|+++++||||....|.|.+.|.|.+++.++..+.++|.|.|+|||+|.|.+..|. .|+|++++|+.|++
T Consensus 50 ~F~Id~~tG~l~~~~~LDrE~~~~y~l~v~a~d~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~E~~~~Gt~v~~ 129 (550)
T 3q2v_A 50 VFIIERETGWLKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGAVPGTSVMK 129 (550)
T ss_dssp SEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTSCBCSCCEEEEEEEECCSCCCCCBSCSEEEEEEETTCCTTCEEEE
T ss_pred eEEEeCCceEEEECCccCcccCCeeEEEEEEEeCCCCcccceEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCCEEEE
Confidence 45555 57999999999999999999999999998888888899999999999999999999886 99999999999999
Q ss_pred EEEEeCCCC
Q psy11095 85 VNAIDKDGT 93 (102)
Q Consensus 85 v~a~D~D~~ 93 (102)
+.|+|+|.+
T Consensus 130 v~A~D~D~g 138 (550)
T 3q2v_A 130 VSATDADDD 138 (550)
T ss_dssp CCBCCCSCT
T ss_pred EEEEeCCCC
Confidence 999999988
No 13
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=99.84 E-value=1.6e-20 Score=128.78 Aligned_cols=90 Identities=26% Similarity=0.339 Sum_probs=75.0
Q ss_pred CccEEECCceeEEEcCcCCcccC-----CEEEEEEEEEECCCC-CceeeEEEEEEEecCCCCCcEeecCc--ce-EEeCC
Q psy11095 5 FLCYLLFTWADIKVNHPLDYETI-----KEYNLTIRVENNGAQ-QLASEATVHIILEDVNDEIPLFTERE--QE-TVLEG 75 (102)
Q Consensus 5 ~~~f~~~~~G~i~~~~~LD~E~~-----~~~~l~v~a~d~~~~-~~~~~~~v~i~v~d~Nd~~P~f~~~~--~~-~v~E~ 75 (102)
..+|.++++|.|+++++||||.. ..|.|.+.|.|.+.+ ++++.+.|+|.|.|+|||+|.|.... |. .|+|+
T Consensus 41 ~~~F~i~~tG~l~~~~~LD~E~~~~~~~~~~~l~v~a~d~~~~~~~s~~~~v~I~V~DvNDn~P~F~~~~~~y~~~v~En 120 (316)
T 3ubf_A 41 NPWVTVETNGAVRVKKKWDYEELGPEKTIDFWVIITNMGHNAGIKYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLN 120 (316)
T ss_dssp CSSEEECTTSEEEESSCCCGGGSCTTCEEEEEEEEEC-------CCCEEEEEEEEEECTTCCCCEECCSSSSEEEEECTT
T ss_pred CCeEEECCCeEEEECCccChhhcccccceEEEEEEEEcCCCCCCcccceEEEEEEEEECCCCCCccCCCCCCEEEEEeCC
Confidence 45678878999999999999994 478888888887765 57889999999999999999999875 55 99999
Q ss_pred CCCCcEEEEEEEEeCCCCC
Q psy11095 76 EPIGSKVTQVNAIDKDGTF 94 (102)
Q Consensus 76 ~~~g~~v~~v~a~D~D~~~ 94 (102)
.++|+.|+++.|+|+|.+.
T Consensus 121 ~~~gt~v~~v~A~D~D~g~ 139 (316)
T 3ubf_A 121 APPNTPVFTLQARDPDTDH 139 (316)
T ss_dssp CCTTCEEEECCEECSSTTC
T ss_pred CCCCCEEEEEEEECCCCCC
Confidence 9999999999999999883
No 14
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=99.84 E-value=2.3e-21 Score=133.51 Aligned_cols=88 Identities=30% Similarity=0.345 Sum_probs=79.0
Q ss_pred ccEEECCceeEEEcCcCCcccCCEEEEEEEEEECCC-CCceeeEEEEEEEecCCCCCcEeecCcce-EEeCCCCCCcEEE
Q psy11095 6 LCYLLFTWADIKVNHPLDYETIKEYNLTIRVENNGA-QQLASEATVHIILEDVNDEIPLFTEREQE-TVLEGEPIGSKVT 83 (102)
Q Consensus 6 ~~f~~~~~G~i~~~~~LD~E~~~~~~l~v~a~d~~~-~~~~~~~~v~i~v~d~Nd~~P~f~~~~~~-~v~E~~~~g~~v~ 83 (102)
.|.+...+|.|++.++||||....|.|.|.|.|.++ ++++..+.+.|.|.|+|||+|.|....|. .|+|+.++|+.|+
T Consensus 47 ~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~ 126 (322)
T 2a62_A 47 IFQINDITGDIHAIKRLDREEKAEYTLTAQAVDFETNKPLEPPSEFIIKVQDINDNAPEFLNGPYHATVPEMSILGTSVT 126 (322)
T ss_dssp TEEEETTTTEEEECSCCCTTTCSBCCEEEEEECTTTCSEEEEEEEECEECCCCSCSCBCCSSSEEEEEECSSCCTTCBCC
T ss_pred cEEEeCCcCEEEEeccCCcccccEEEEEEEEEECCCCCcccceEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCCEEE
Confidence 344445679999999999999999999999999875 45778899999999999999999998886 9999999999999
Q ss_pred EEEEEeCCCC
Q psy11095 84 QVNAIDKDGT 93 (102)
Q Consensus 84 ~v~a~D~D~~ 93 (102)
++.|+|+|.+
T Consensus 127 ~v~A~D~D~~ 136 (322)
T 2a62_A 127 NVTATDADDP 136 (322)
T ss_dssp CCCCCBCSCS
T ss_pred EEEEEeCCCC
Confidence 9999999973
No 15
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=99.84 E-value=3.2e-20 Score=141.12 Aligned_cols=94 Identities=27% Similarity=0.340 Sum_probs=84.5
Q ss_pred cEEEC-CceeEEEcCcCCcccCCEEEEEEEEEECCCCCceeeEEEEEEEecCCCCCcEeecCcce-EEeCCCCCCcEEEE
Q psy11095 7 CYLLF-TWADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE-TVLEGEPIGSKVTQ 84 (102)
Q Consensus 7 ~f~~~-~~G~i~~~~~LD~E~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d~Nd~~P~f~~~~~~-~v~E~~~~g~~v~~ 84 (102)
.|.++ .+|.|+++++||||....|.|.+.|.|.++++++..+.|+|.|.|+|||+|.|.+..|. .|+|+.++|+.|++
T Consensus 205 ~F~Id~~tG~l~~~~~LDrE~~~~y~l~v~A~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~Gt~V~~ 284 (880)
T 1q55_A 205 VFRIEWETGWMLVTRPLDREEYDKYVLSSHAVSENGSPVEEPMEITINVIDQNDNRPKFTQDVFRGSVREGVQPGTQVMA 284 (880)
T ss_dssp SEEECTTTCEEEECSCCCTTTCCEEEEEEEEEESSSCBCSCCEEEEEEEECCSCCCCEESSSCEEEEEETTCCSSEEEEE
T ss_pred EEEEECCcCEEEECCccCccccCccEEEEEEEECCCCceeeeEEEEEEEEecCCCCCCccCCcEEEEEeCCCCCCceeEE
Confidence 56666 57999999999999999999999999999888888999999999999999999999886 99999999999999
Q ss_pred EEEEeCCCCC--CCceEE
Q psy11095 85 VNAIDKDGTF--PNNQLL 100 (102)
Q Consensus 85 v~a~D~D~~~--~~~~~~ 100 (102)
+.|+|+|.+. .|+.+.
T Consensus 285 v~AtD~D~g~~~~N~~v~ 302 (880)
T 1q55_A 285 VSATDEDDNIDSLNGVLS 302 (880)
T ss_dssp CCEECCSCCSSSSTTCCE
T ss_pred EEEEcCCCCCCCcCcEEE
Confidence 9999999982 455443
No 16
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=99.83 E-value=8.7e-20 Score=129.23 Aligned_cols=91 Identities=26% Similarity=0.375 Sum_probs=79.0
Q ss_pred CCccEEECCceeEEEcCcCCcccC---CEEEEEEEEEECCCC---CceeeEEEEEEEecCCCCCcEeecCc--ce-EEeC
Q psy11095 4 NFLCYLLFTWADIKVNHPLDYETI---KEYNLTIRVENNGAQ---QLASEATVHIILEDVNDEIPLFTERE--QE-TVLE 74 (102)
Q Consensus 4 ~~~~f~~~~~G~i~~~~~LD~E~~---~~~~l~v~a~d~~~~---~~~~~~~v~i~v~d~Nd~~P~f~~~~--~~-~v~E 74 (102)
+..+|.++.+|.|+++++||||.. ..|.+.|.|+|.+.+ +++..+.|+|.|.|+|||+|.|.... |. .|+|
T Consensus 45 ~~~~f~v~~tG~i~~~~~LD~E~~~~~~~~~~~V~a~d~g~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~~~~~~~v~E 124 (419)
T 3ubh_A 45 DNPWVTVETNGAVRVKKKWDYEELGPEKTIDFWVIITNMGHNAGIKYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQL 124 (419)
T ss_dssp CCSSEEECTTSEEEESSCCCGGGSCTTCEEEEEEEEEC--CCSSSCCEEEEEEEEEEECCCCSCCEECCSSSSCEEEECT
T ss_pred CCccEEECCCcEEEECCccCccccCccceEEEEEEEEeCCCCCCCCCcceEEEEEEEEECCCCCCcccCCCCcEEEEEeC
Confidence 445666668999999999999997 689999999998754 57788999999999999999999875 54 8999
Q ss_pred CCCCCcEEEEEEEEeCCCCC
Q psy11095 75 GEPIGSKVTQVNAIDKDGTF 94 (102)
Q Consensus 75 ~~~~g~~v~~v~a~D~D~~~ 94 (102)
+.++|+.|+++.|+|+|.+.
T Consensus 125 ~~~~gt~v~~v~A~D~D~g~ 144 (419)
T 3ubh_A 125 NAPPNTPVFTLQARDPDTDH 144 (419)
T ss_dssp TCCTTCEEEECCEECSSTTC
T ss_pred CCCCCCEEEEEEEECCCCCc
Confidence 99999999999999999873
No 17
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=99.81 E-value=2.5e-19 Score=126.91 Aligned_cols=92 Identities=25% Similarity=0.447 Sum_probs=79.6
Q ss_pred ccEEEC-CceeEEEcCcCCcccCC---EEEEEEEEEECCCCCceeeEEEEEEEecCCCCCcEeecCcce--EEeCCCCCC
Q psy11095 6 LCYLLF-TWADIKVNHPLDYETIK---EYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE--TVLEGEPIG 79 (102)
Q Consensus 6 ~~f~~~-~~G~i~~~~~LD~E~~~---~~~l~v~a~d~~~~~~~~~~~v~i~v~d~Nd~~P~f~~~~~~--~v~E~~~~g 79 (102)
..|.++ .+|.|++.++||||... .|.|.|.|+|.+ +++++.+.|+|.|.|+|||+|.|..+.|. .|+|+.++|
T Consensus 263 ~~F~I~~~tG~i~~~~~LD~E~~~~~~~y~l~V~a~dd~-~~~s~~~~v~I~V~DvNDn~P~f~~~~~~~~~v~E~~~~g 341 (419)
T 3ubh_A 263 GTFNIGPTSGIVKLAKELDFEDLRQPHVYSLIVTATEDS-GGFSTSVDLTIRVTDVNDNAPKFELPDYQAHNVDEDIPLG 341 (419)
T ss_dssp SSEEECTTTCEEEECSCCCTTCTTSCSEEEEEEEEECTT-TSCEEEEEEEEEEECCCCCCCEESSSEEEEEEEETTCCTT
T ss_pred CcEEEECCCCEEEECcccCccccccccEEEEEEEEEeCC-CCcEEEEEEEEEEEccCCCCCcccCCcceeEEecCCCCCC
Confidence 456665 57999999999999875 799999999754 35788899999999999999999988774 699999999
Q ss_pred cEEEEEEEEeCCCCCCCceE
Q psy11095 80 SKVTQVNAIDKDGTFPNNQL 99 (102)
Q Consensus 80 ~~v~~v~a~D~D~~~~~~~~ 99 (102)
+.|++|.|+|+|.| .|+.+
T Consensus 342 t~v~~v~A~D~D~g-~n~~v 360 (419)
T 3ubh_A 342 TSILRVKAMDSDSG-SNAEI 360 (419)
T ss_dssp CEEEECCEECSSCG-GGGCE
T ss_pred CEEEEEEEEeCCCC-CCCEE
Confidence 99999999999998 44444
No 18
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=99.81 E-value=7.9e-20 Score=133.08 Aligned_cols=94 Identities=27% Similarity=0.342 Sum_probs=82.3
Q ss_pred ccEEEC-CceeEEEc-CcCCcccCCEEEEEEEEEECCCCCceeeEEEEEEEecCCCCCcEeecCcce-EEeCCCCCCcEE
Q psy11095 6 LCYLLF-TWADIKVN-HPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE-TVLEGEPIGSKV 82 (102)
Q Consensus 6 ~~f~~~-~~G~i~~~-~~LD~E~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d~Nd~~P~f~~~~~~-~v~E~~~~g~~v 82 (102)
..|.++ .+|.|++. ++||||....|.|.|.|+|.+++++++.+.|+|.|.|+|||+|.|....|. .|+|+ ++|+.|
T Consensus 167 ~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En-~~gt~v 245 (546)
T 1l3w_A 167 NLFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGAGLSVEGKAIIQITDANDNAPIFDPKTYTALVPEN-EIGFEV 245 (546)
T ss_dssp CSEEECTTTCEEEECSCCCCTTTCCEEEEEEEEEHHHHTSCEEECCEEEEEECCCCCCCCBSCSEEEEEEESS-SCCCEE
T ss_pred CcEEEeCCCceEEEeccCCCcccCceEEEEEEEEECCCCCcceEEEEEEEEeecCCCCCccccccceEEEEeC-CCCCEE
Confidence 456665 46999995 789999999999999999998888999999999999999999999999886 99999 999999
Q ss_pred EEEEEEeCCCC-CCCceEE
Q psy11095 83 TQVNAIDKDGT-FPNNQLL 100 (102)
Q Consensus 83 ~~v~a~D~D~~-~~~~~~~ 100 (102)
+++.|+|+|.+ +.++.+.
T Consensus 246 ~~v~A~D~D~~~g~n~~v~ 264 (546)
T 1l3w_A 246 QRLSVTDLDMPGTPAWQAV 264 (546)
T ss_dssp EEECBCCCSCTTSTTSCEE
T ss_pred EEEEEEeCCCCCCCCcEEE
Confidence 99999999942 3455443
No 19
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=99.81 E-value=2.4e-19 Score=122.97 Aligned_cols=85 Identities=13% Similarity=0.150 Sum_probs=75.0
Q ss_pred ccEEEC-CceeEEEcCcCCcccCCEEEEEEEEEECCC----CCceeeEEEEEEEecCCCCCcEeecCcce-EEeCCCCCC
Q psy11095 6 LCYLLF-TWADIKVNHPLDYETIKEYNLTIRVENNGA----QQLASEATVHIILEDVNDEIPLFTEREQE-TVLEGEPIG 79 (102)
Q Consensus 6 ~~f~~~-~~G~i~~~~~LD~E~~~~~~l~v~a~d~~~----~~~~~~~~v~i~v~d~Nd~~P~f~~~~~~-~v~E~~~~g 79 (102)
..|.++ .+|.|++.++||||....|.|.|.|+|.++ +++++.+.++|.|.| |||+|.|.+..|. .|+|+.++|
T Consensus 152 ~~F~Id~~tG~i~~~~~lD~e~~~~y~l~V~A~D~g~~~~~~~~~~~~~v~I~V~d-nDn~P~F~~~~y~~~v~En~~~g 230 (316)
T 3ubf_A 152 GRFEVDERSGVVRTRGTDLFQLDMEYVLYVKAEDQNGKVDDRRFQSTPEERLSIVG-GKRAPQFYMPSYEAEIPENQKKD 230 (316)
T ss_dssp SCEEECTTTCEEEECSSCCCCTTCEEEEEEEEEESCC-------CBCCCEEEEEEE-SCCCCEESSSSEEEEEETTCCTT
T ss_pred CEEEEECCccEEEECCcCCcccCcEEEEEEEEEeCCCCCCCccccceEEEEEEEEc-CCCCCEEcCCCceEEEeCCCCCC
Confidence 345555 579999999999999999999999999875 357788899999999 9999999999886 999999999
Q ss_pred cEEEEEEEEeCC
Q psy11095 80 SKVTQVNAIDKD 91 (102)
Q Consensus 80 ~~v~~v~a~D~D 91 (102)
+.|+++.|+|+|
T Consensus 231 t~v~~v~A~D~D 242 (316)
T 3ubf_A 231 SDIISIKAKSFA 242 (316)
T ss_dssp CEEEECCEECTT
T ss_pred CEEEEEEEEeCC
Confidence 999999999998
No 20
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=99.79 E-value=2.8e-18 Score=124.98 Aligned_cols=88 Identities=30% Similarity=0.397 Sum_probs=78.5
Q ss_pred CCceeEEEcCcCCcccCCEEEEEEEEEECCC---CCceeeEEEEEEEecCCCCCcEeecCcce-EEeCCCCCCcEEEEEE
Q psy11095 11 FTWADIKVNHPLDYETIKEYNLTIRVENNGA---QQLASEATVHIILEDVNDEIPLFTEREQE-TVLEGEPIGSKVTQVN 86 (102)
Q Consensus 11 ~~~G~i~~~~~LD~E~~~~~~l~v~a~d~~~---~~~~~~~~v~i~v~d~Nd~~P~f~~~~~~-~v~E~~~~g~~v~~v~ 86 (102)
..+|.|++.++||||....|.|.|.|+|.+. +.+++.+.|+|.|.|+|| +|.|....|. .|+|+.++|+.|+++.
T Consensus 277 ~~tG~i~~~~~LD~E~~~~y~l~V~a~D~~~~~~~~~~~~~~v~I~V~DvND-~P~f~~~~~~~~v~E~~~~gt~v~~v~ 355 (550)
T 3q2v_A 277 TNDGILKTAKGLDFEAKQQYILHVRVENEEPFEGSLVPSTATVTVDVVDVNE-APIFMPAERRVEVPEDFGVGQEITSYT 355 (550)
T ss_dssp TCCEEEEESSCCCTTTCSEEEEEEEEEESSCCCSSCCCEEEEEEEEEECCCC-CCEESSSSCEEEEETTCCSSCEEEECC
T ss_pred CccEEEEecccCCccccceEEEEEEEEeCCCCCCCccceEEEEEEEEEecCC-CCeEcCcceEEEEecCCCCCCEEEEEe
Confidence 4679999999999999999999999999873 457889999999999999 9999998876 9999999999999999
Q ss_pred EEeCCCCCCCceE
Q psy11095 87 AIDKDGTFPNNQL 99 (102)
Q Consensus 87 a~D~D~~~~~~~~ 99 (102)
|+|+|.+..+...
T Consensus 356 A~D~D~g~n~~i~ 368 (550)
T 3q2v_A 356 AREPDTFMDQKIT 368 (550)
T ss_dssp EECCCCSTTCCCE
T ss_pred CCCCCCCCCCCEE
Confidence 9999998443333
No 21
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=99.78 E-value=1.4e-18 Score=126.86 Aligned_cols=87 Identities=29% Similarity=0.355 Sum_probs=78.0
Q ss_pred cEEEC-CceeEEEcC-cCCcccCCEEEEEEEEEECCC---CCceeeEEEEEEEecCCCCCcEeecCcce-EEeCCCCCCc
Q psy11095 7 CYLLF-TWADIKVNH-PLDYETIKEYNLTIRVENNGA---QQLASEATVHIILEDVNDEIPLFTEREQE-TVLEGEPIGS 80 (102)
Q Consensus 7 ~f~~~-~~G~i~~~~-~LD~E~~~~~~l~v~a~d~~~---~~~~~~~~v~i~v~d~Nd~~P~f~~~~~~-~v~E~~~~g~ 80 (102)
.|.++ .+|.|++.+ +||||....|.|.|+|+|.++ +++++.+.|+|.|.|+|||+|.|....|. .|+|+. +|+
T Consensus 161 ~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~A~D~~g~p~~~~s~t~~v~I~V~DvNDn~P~f~~~~y~~~V~En~-~g~ 239 (559)
T 3q2w_A 161 MFTINNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSNTATAVITVTDVNDNPPEFTAMTFYGEVPENR-VDV 239 (559)
T ss_dssp CEEECTTTCEEEECCSCCCTTTCCEEEEEEEEEHHHHCTTTCCEEEEEEEEEEECCSCSCCEESSSEEEEEEESSC-SSE
T ss_pred eEEEeCCceEEEEEeccCCcccCCEEEEEEEEEECCCCCCCCccceEEEEEEEEeCCCCCCccccccceeEecCCC-CCc
Confidence 45555 579999988 899999999999999999754 35889999999999999999999999886 999997 899
Q ss_pred EEEEEEEEeCCCCC
Q psy11095 81 KVTQVNAIDKDGTF 94 (102)
Q Consensus 81 ~v~~v~a~D~D~~~ 94 (102)
.|+++.|+|+|.+.
T Consensus 240 ~v~~v~a~D~D~~~ 253 (559)
T 3q2w_A 240 IVANLTVTDKDQPH 253 (559)
T ss_dssp EEEEEEEECCSCTT
T ss_pred EEEEEEEEcCCCCC
Confidence 99999999999873
No 22
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=99.78 E-value=5.9e-19 Score=134.24 Aligned_cols=94 Identities=27% Similarity=0.342 Sum_probs=82.3
Q ss_pred ccEEEC-CceeEEEc-CcCCcccCCEEEEEEEEEECCCCCceeeEEEEEEEecCCCCCcEeecCcce-EEeCCCCCCcEE
Q psy11095 6 LCYLLF-TWADIKVN-HPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE-TVLEGEPIGSKV 82 (102)
Q Consensus 6 ~~f~~~-~~G~i~~~-~~LD~E~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d~Nd~~P~f~~~~~~-~v~E~~~~g~~v 82 (102)
..|.++ .+|.|++. ++||||....|.|.|.|+|.+++++++.+.|+|.|.|+|||+|.|....|. .|+|+ ++|+.|
T Consensus 316 ~~F~Id~~tG~I~~~~~~LDrE~~~~y~l~V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En-~~gt~V 394 (880)
T 1q55_A 316 NLFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGAGLSVEGKAIIQITDANDNAPIFDPKTYTALVPEN-EIGFEV 394 (880)
T ss_dssp CSEEECTTTCEEEECSCCCCTTTCCEEEEEEEEEHHHHTSCEEECCEEEEEECCCCCCCCBSCSEEEEEEESS-SCCCEE
T ss_pred CeEEEccCCccEEEecccCCHHHcceeEEEEEEEECCCCCccceeEEEEEEEeccCCCCCccccceEEEeecC-CCCcEE
Confidence 356665 46999996 689999999999999999998888999999999999999999999999886 99999 999999
Q ss_pred EEEEEEeCCCC-CCCceEE
Q psy11095 83 TQVNAIDKDGT-FPNNQLL 100 (102)
Q Consensus 83 ~~v~a~D~D~~-~~~~~~~ 100 (102)
+++.|+|+|.+ +.++.+.
T Consensus 395 ~~v~A~D~D~~~g~n~~v~ 413 (880)
T 1q55_A 395 QRLSVTDLDMPGTPAWQAV 413 (880)
T ss_dssp EEECBCCCSCTTSTTSCEE
T ss_pred EEEEEECCCCCCCCCceEE
Confidence 99999999953 3455443
No 23
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*
Probab=99.76 E-value=3.5e-18 Score=113.69 Aligned_cols=95 Identities=24% Similarity=0.213 Sum_probs=73.1
Q ss_pred ccEEEC-CceeEEEc---CcCCcccCCEEEEEEEEEECC--CCCceeeEEEEEEEecCCCCCcEeecCcce-EEeCCCCC
Q psy11095 6 LCYLLF-TWADIKVN---HPLDYETIKEYNLTIRVENNG--AQQLASEATVHIILEDVNDEIPLFTEREQE-TVLEGEPI 78 (102)
Q Consensus 6 ~~f~~~-~~G~i~~~---~~LD~E~~~~~~l~v~a~d~~--~~~~~~~~~v~i~v~d~Nd~~P~f~~~~~~-~v~E~~~~ 78 (102)
.+|.++ .+|.+++. +.||||....|.+.+.+.+.. .......+.|+|.|.|+|||+|.|.+..|. .|+|+.++
T Consensus 63 ~~f~id~~tg~~~l~~t~~~LDrE~~~~~~~~~~~v~~~~~~~~~~~~~~V~I~V~DvNDn~P~F~~~~y~~~v~En~~~ 142 (242)
T 4apx_B 63 YWVLLDPVKQMLFLNSTGRVLDRDPPMNIHSIVVQVQCVNKKVGTVIYHEVRIVVRDRNDNSPTFKHESYYATVNELTPV 142 (242)
T ss_dssp GCEEEETTTTEEEECCTTSCCCCSTTTCCCEEEEEEEEEETTTCCEEEEEEEEEEECCCCCCCEESSSCEEEEEETTCCT
T ss_pred ceEEECCCCCEEEEEecCCceeccCCCceEEEEEEEEeECCCCCeEEEEEEEEEEEeCCCCCCcccceeeeeEeeeccCC
Confidence 345555 56998875 579999987776555544432 223556678999999999999999999886 99999999
Q ss_pred CcEEEE-----EEEEeCCCCCCCceEEe
Q psy11095 79 GSKVTQ-----VNAIDKDGTFPNNQLLD 101 (102)
Q Consensus 79 g~~v~~-----v~a~D~D~~~~~~~~~~ 101 (102)
|+.|++ +.|+|+|.| .|+.+.|
T Consensus 143 Gt~v~~~~~~~v~A~D~D~g-~N~~v~Y 169 (242)
T 4apx_B 143 GTTIFTGFSGDNGATDIDDG-PNGQIEY 169 (242)
T ss_dssp TCEEECTTTTTTSEECCSSG-GGGCEEE
T ss_pred CCEEEEeeecccccccCCCC-cCCceEE
Confidence 999986 789999998 5555433
No 24
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A
Probab=99.73 E-value=8.1e-18 Score=99.84 Aligned_cols=59 Identities=24% Similarity=0.383 Sum_probs=45.7
Q ss_pred ccEEEC-CceeEEEcCcCCcccCCEEEEEEEEEECCCCCceeeEEEEEEEecCCCCCcEe
Q psy11095 6 LCYLLF-TWADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLF 64 (102)
Q Consensus 6 ~~f~~~-~~G~i~~~~~LD~E~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d~Nd~~P~f 64 (102)
..|.++ .+|.|+++++||||..+.|.|.|.|+|.+.+++++.+.|.|.|.|+|||+|.|
T Consensus 51 ~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D~g~p~~~~~~~v~I~V~DvNDn~P~F 110 (110)
T 1ncg_A 51 GIFIINPISGQLSVTKPLDRELIARFHLRAHAVDINGNQVENPIDIVINVIDMNDNRPEF 110 (110)
T ss_dssp TSEEECTTTCEEEECSCCCTTTCCEEEEEEEEECTTSCBCSCCEEEEEEEC---------
T ss_pred CEEEEECCCCEEEECCcCCcccCCeEEEEEEEEECCCCceeeEEEEEEEEEECCCCCCCC
Confidence 355565 57999999999999999999999999999998999999999999999999987
No 25
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.73 E-value=1.4e-17 Score=100.61 Aligned_cols=61 Identities=21% Similarity=0.260 Sum_probs=55.4
Q ss_pred ccEEECCceeEEEcCcCCcccCCEEEEEEEEEECCCCCceeeEEEEEEEecCCCCCcEeec
Q psy11095 6 LCYLLFTWADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTE 66 (102)
Q Consensus 6 ~~f~~~~~G~i~~~~~LD~E~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d~Nd~~P~f~~ 66 (102)
.|.+...+|.|+++++||||....|.|.|.|.|.+.+++++.+.|.|.|.|+|||+|.|.+
T Consensus 62 ~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D~g~p~~~~~~~v~I~V~DvNDn~P~F~~ 122 (123)
T 2yqg_A 62 IFVFNKDTGELNVTSILDREETPFFLLTGYALDARGNNVEKPLELRIKVLDINDNEPVFTQ 122 (123)
T ss_dssp SEEEETTTTEEEECSCCBTTTBSEEEEEEEEECTTCCEEEEEECCEEEEECTTCCCCCCCC
T ss_pred CEEEeCCcCEEEECcccCcccCceEEEEEEEEECCCCceEEEEEEEEEEEEcCCCCCEeCC
Confidence 3444455799999999999999999999999999998899999999999999999999975
No 26
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.60 E-value=2.5e-15 Score=90.01 Aligned_cols=57 Identities=25% Similarity=0.336 Sum_probs=52.7
Q ss_pred ccEEECC-ceeEEEcCcCCcccCCEEEEEEEEEECCCCCceeeEEEEEEEecCCCCCc
Q psy11095 6 LCYLLFT-WADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIP 62 (102)
Q Consensus 6 ~~f~~~~-~G~i~~~~~LD~E~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d~Nd~~P 62 (102)
..|.+++ +|.|+++++||||....|.|.|.|+|.+.+++++.+.|+|.|.|+|||+|
T Consensus 62 ~~F~Id~~tG~I~~~~~LD~E~~~~y~l~V~A~D~g~p~~s~~~~v~I~V~DvNDn~P 119 (119)
T 2yst_A 62 RLLRLDETSGWLSVLHRIDREEVNQLRFTVMARDRGQPPKTDKATVVLNIKDENDNVP 119 (119)
T ss_dssp HHEEECTTTCEEEECSCCCTTTCSEEEEEEEECCSBTTBCCEEEEEEEEEECSTTCCC
T ss_pred cEEEEeCCceEEEECccCCcccCCEEEEEEEEEECCCCCcEEEEEEEEEEEeccCCCC
Confidence 3566665 79999999999999999999999999999989999999999999999998
No 27
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=99.56 E-value=1.1e-14 Score=96.87 Aligned_cols=62 Identities=19% Similarity=0.229 Sum_probs=53.1
Q ss_pred CccEEEC-CceeEEEcCcCCcccCCEEEEEEEEEE-CCCCCceeeEEEEEEEecCCCCCcEeec
Q psy11095 5 FLCYLLF-TWADIKVNHPLDYETIKEYNLTIRVEN-NGAQQLASEATVHIILEDVNDEIPLFTE 66 (102)
Q Consensus 5 ~~~f~~~-~~G~i~~~~~LD~E~~~~~~l~v~a~d-~~~~~~~~~~~v~i~v~d~Nd~~P~f~~ 66 (102)
...|.++ .+|.|++.++||||....|.|.|.|+| .++|++++.+.|+|.|.|+|||+|.|..
T Consensus 183 ~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~d~dg~p~~ss~~~v~I~V~DvNDn~P~F~~ 246 (246)
T 2x2u_A 183 GLPFRSAPDSLEVSTRWALDREQREKYELVAVCTVHAGAREEVVMVPFPVTVYDEDDSAPEFEN 246 (246)
T ss_dssp TSSEECCTTCCEEEESSCBCTTTCSEEEEEEEEEEC---CCEEEEEEEEEEEECSSCCSCCCCC
T ss_pred CCCEEEECCcCEEEeCCccCccccceEEEEEEEEecCCCCcceEEEEEEEEEEEeCCCCCccCC
Confidence 3556666 469999999999999999999999998 5668899999999999999999999963
No 28
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}
Probab=99.53 E-value=4.7e-15 Score=89.74 Aligned_cols=62 Identities=26% Similarity=0.264 Sum_probs=52.1
Q ss_pred ccEEEC-CceeEEEcCcCCcccC----CEEEEEEEEEECCCCCceeeEEEEEEEecCCCCCcEeecCcce
Q psy11095 6 LCYLLF-TWADIKVNHPLDYETI----KEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQE 70 (102)
Q Consensus 6 ~~f~~~-~~G~i~~~~~LD~E~~----~~~~l~v~a~d~~~~~~~~~~~v~i~v~d~Nd~~P~f~~~~~~ 70 (102)
.+|.++ .+|.|+++++||||.. ..|.|.+.|.+.. +. ..+.|.|.|.|+|||+|.|.++.|.
T Consensus 55 ~~F~Id~~tG~i~~~~~LDRE~~c~~~~~y~l~v~a~~~~--p~-~~~~V~I~V~DvNDN~P~F~~~~y~ 121 (125)
T 1wyj_A 55 QLLQLEQKSGNLLLKEKLDREELCGSTNPCILHFQVLLKS--PV-QFIQGEIQLQDVNDHAPEFMEDESG 121 (125)
T ss_dssp CSEEECSSSSEEEESSCCCSTTTCTTCSSCCBCCEEEETT--TT-EEECCCEEECCCCCCCCCCCCCCCC
T ss_pred CeEEEECCccEEEECccccchhhcccCCcEEEEEEEEECC--CC-eEEEEEEEEEEccCCCCcCCCcEEE
Confidence 456666 4799999999999999 9999999999732 23 4778999999999999999988663
No 29
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus}
Probab=99.42 E-value=8.1e-13 Score=76.95 Aligned_cols=51 Identities=22% Similarity=0.364 Sum_probs=45.9
Q ss_pred ccEEEC-CceeEEEcCcCCcccCCEEEEEEEEEECCCCCceeeEEEEEEEec
Q psy11095 6 LCYLLF-TWADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILED 56 (102)
Q Consensus 6 ~~f~~~-~~G~i~~~~~LD~E~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d 56 (102)
..|.++ .+|.|+++++||||....|.|.|.|+|.|++++++.+.|.|.|+|
T Consensus 49 ~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D~g~p~l~~~~~v~I~V~D 100 (100)
T 3k6f_A 49 GTFRINENTGSVSVTRTLDRETIATYQLYVETTDASGKTLEGPVPLEVIVID 100 (100)
T ss_dssp TSEEECTTTCEEEECSCCCTTTCSEEEEEEEEECTTCCEEEEEEEEEEEEEC
T ss_pred CEEEEECCCCEEEECcccCCcCCCEEEEEEEEEECCCCcccceEEEEEEEEC
Confidence 345555 579999999999999999999999999999999999999999986
No 30
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=99.42 E-value=5.9e-13 Score=86.99 Aligned_cols=58 Identities=21% Similarity=0.274 Sum_probs=45.6
Q ss_pred ccEEECC-ceeEEEc-CcCCcccCCEEEEEEEEEECCCC--CceeeEEEEEEEecCCCCCcE
Q psy11095 6 LCYLLFT-WADIKVN-HPLDYETIKEYNLTIRVENNGAQ--QLASEATVHIILEDVNDEIPL 63 (102)
Q Consensus 6 ~~f~~~~-~G~i~~~-~~LD~E~~~~~~l~v~a~d~~~~--~~~~~~~v~i~v~d~Nd~~P~ 63 (102)
.+|.+++ +|.|+++ ++||||....|.|.|.|+|.+.+ ++++.+.|+|.|.|+|||+|.
T Consensus 154 ~~F~Id~~tG~I~~~~~~LD~E~~~~y~l~V~A~D~g~~~~~~s~~~~v~I~V~DvNDn~P~ 215 (215)
T 2a4e_A 154 PYFSVEAQTGIIRTALPNMDREAKEEYHVVIQAKDMGGHMGGLSGTTKVTITLTDDYKDDDK 215 (215)
T ss_dssp TTEEECTTTCEEEECSSCCCSSSCSEEEEEEEEETTTTCTTCCEEEEEEEEEEEC-------
T ss_pred CcEEEeCCccEEEEcccCCCcccCCEEEEEEEEEECCCCCCCceeEEEEEEEEEECCCCCCC
Confidence 4566665 6999999 89999999999999999999876 588999999999999999994
No 31
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B
Probab=99.41 E-value=7.8e-13 Score=77.67 Aligned_cols=51 Identities=22% Similarity=0.334 Sum_probs=46.4
Q ss_pred cEEECC-ceeEEEcCcCCcccCCEEEEEEEEEECCCCCceeeEEEEEEEecC
Q psy11095 7 CYLLFT-WADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDV 57 (102)
Q Consensus 7 ~f~~~~-~G~i~~~~~LD~E~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d~ 57 (102)
.|.+++ +|.|+++++||||..+.|.|+|.|+|.+.+++++.+.|.|.|.|+
T Consensus 54 ~F~Id~~tG~I~~~~~LDrE~~~~y~l~V~A~D~g~p~~~~~~~v~I~V~Dv 105 (105)
T 2omz_B 54 VFIIERETGWLKVTEPLDRERIATYTLFSHAVSSNGNAVEDPMEILITVTDQ 105 (105)
T ss_dssp SEEECTTTCEEEECSCCCTTTCCEEEEEEEEECTTSCBSSCCEEEEEEEEC-
T ss_pred EEEEeCCCCEEEECccCCcCCCCeEEEEEEEEECCCCceeeEEEEEEEEEeC
Confidence 566665 799999999999999999999999999999999999999999985
No 32
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus}
Probab=99.41 E-value=1.4e-12 Score=75.74 Aligned_cols=50 Identities=24% Similarity=0.423 Sum_probs=45.5
Q ss_pred cEEEC-CceeEEEcCcCCcccCCEEEEEEEEEECCCCCceeeEEEEEEEec
Q psy11095 7 CYLLF-TWADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILED 56 (102)
Q Consensus 7 ~f~~~-~~G~i~~~~~LD~E~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d 56 (102)
.|.++ .+|.|+++++||||....|.|.|.|+|.|++++++.+.|.|.|+|
T Consensus 49 ~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~A~D~g~~~l~~~~~v~I~V~D 99 (99)
T 3k6i_A 49 IFRINEISGDVSVTRPLDREAIANYELEVEVTDLSGKIIDGPVRLDISVID 99 (99)
T ss_dssp SEEECTTTCEEEECSCCCTTTCCEEEEEEEEEETTSCEEEEEEEEEEEEEC
T ss_pred EEEEECCCcEEEECcccCCccCCEEEEEEEEEECCCCceeeeEEEEEEEEC
Confidence 45555 579999999999999999999999999999999999999999986
No 33
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A
Probab=99.41 E-value=1.2e-12 Score=76.13 Aligned_cols=51 Identities=18% Similarity=0.376 Sum_probs=45.8
Q ss_pred ccEEEC-CceeEEEcCcCCcccCCEEEEEEEEEECCCCCceeeEEEEEEEec
Q psy11095 6 LCYLLF-TWADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILED 56 (102)
Q Consensus 6 ~~f~~~-~~G~i~~~~~LD~E~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d 56 (102)
..|.++ .+|.|+++++||||..+.|.|.|.|.|.+++++++.+.|+|.|.|
T Consensus 48 ~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D~g~~~l~~~~~v~I~V~D 99 (99)
T 3k6d_A 48 GIFKINENSGEVSVTKALDREAIPSYQLQVETTDENGKTIEGPVDLEILVID 99 (99)
T ss_dssp TSEEECTTTCEEEECSCCCTTTCCEEEEEEEEECTTCCEEEEEEEEEEEEEC
T ss_pred CEEEEECCceEEEECcCCCcccCceEEEEEEEEECCCCceeeEEEEEEEEEC
Confidence 345555 569999999999999999999999999999999999999999986
No 34
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus}
Probab=99.38 E-value=2.4e-12 Score=74.86 Aligned_cols=51 Identities=20% Similarity=0.320 Sum_probs=45.6
Q ss_pred ccEEECC-ceeEEEcCcCCcccCCEEEEEEEEEECC-CCCceeeEEEEEEEec
Q psy11095 6 LCYLLFT-WADIKVNHPLDYETIKEYNLTIRVENNG-AQQLASEATVHIILED 56 (102)
Q Consensus 6 ~~f~~~~-~G~i~~~~~LD~E~~~~~~l~v~a~d~~-~~~~~~~~~v~i~v~d 56 (102)
..|.+++ +|.|++.++||||..+.|.|+|.|+|.| ++++++.+.|.|.|.|
T Consensus 47 ~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D~G~~p~l~~~~~v~I~V~D 99 (99)
T 1zvn_A 47 IVFTIDDTTGDIHAIQRLDREERSQYTLRAQALDRRTGRPMEPESEFIIKIQD 99 (99)
T ss_dssp TTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTTCCBSSCCEEEEEEEEC
T ss_pred ceEEEeCCCCCEEECeecCCccCCeEEEEEEEEECCCCCCcceeEEEEEEEeC
Confidence 3466665 7999999999999999999999999998 5889999999999986
No 35
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A
Probab=99.37 E-value=2.3e-12 Score=74.81 Aligned_cols=50 Identities=24% Similarity=0.293 Sum_probs=45.0
Q ss_pred cEEECC-ceeEEEcCcCCcccCCEEEEEEEEEECCC-CCceeeEEEEEEEec
Q psy11095 7 CYLLFT-WADIKVNHPLDYETIKEYNLTIRVENNGA-QQLASEATVHIILED 56 (102)
Q Consensus 7 ~f~~~~-~G~i~~~~~LD~E~~~~~~l~v~a~d~~~-~~~~~~~~v~i~v~d 56 (102)
.|.+++ +|.|+++++||||..+.|.|+|.|+|.|. +++++.+.|.|.|.|
T Consensus 47 ~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~A~D~g~~~~l~~~~~v~I~V~D 98 (98)
T 1zxk_A 47 IFQINDITGDIHAIKRLDREEKAEYTLTAQAVDFETNKPLEPPSEFIIKVQD 98 (98)
T ss_dssp TEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTTCCBSSCCEEEEEEECC
T ss_pred EEEEECCccEEEECccCCCcCCCeEEEEEEEEECCCCCCcceeEEEEEEEEC
Confidence 566664 79999999999999999999999999987 778999999999976
No 36
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.36 E-value=1.9e-13 Score=81.26 Aligned_cols=49 Identities=29% Similarity=0.336 Sum_probs=42.2
Q ss_pred EEEecCCCCCcEeecCcce-EEeCCCCCCcEEEEEEEEeCCCCCCCceEE
Q psy11095 52 IILEDVNDEIPLFTEREQE-TVLEGEPIGSKVTQVNAIDKDGTFPNNQLL 100 (102)
Q Consensus 52 i~v~d~Nd~~P~f~~~~~~-~v~E~~~~g~~v~~v~a~D~D~~~~~~~~~ 100 (102)
+.|.|+|||+|.|.+..|. .|+|+.++|+.|++++|+|+|.|..+...|
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y 51 (114)
T 2ee0_A 2 SSGSSGNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRY 51 (114)
T ss_dssp CCCCCCCCCCCCCSCSEEEEEEETTCCTTCEEEECCCCSCSSCCCSCCEE
T ss_pred CeEeeCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCcEEEE
Confidence 4689999999999999886 999999999999999999999984333333
No 37
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=99.34 E-value=8.3e-12 Score=81.09 Aligned_cols=57 Identities=25% Similarity=0.376 Sum_probs=50.7
Q ss_pred CccEEEC-CceeEEEcCcCCcccCCEEEEEEEEEECCC-CCceeeEEEEEEEecCCCCC
Q psy11095 5 FLCYLLF-TWADIKVNHPLDYETIKEYNLTIRVENNGA-QQLASEATVHIILEDVNDEI 61 (102)
Q Consensus 5 ~~~f~~~-~~G~i~~~~~LD~E~~~~~~l~v~a~d~~~-~~~~~~~~v~i~v~d~Nd~~ 61 (102)
..+|.++ .+|.|++.++||||....|.|.|.|+|.++ +++++.+.++|.|.|+||++
T Consensus 152 ~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~a~D~g~~~~~s~~~~v~I~V~DvND~~ 210 (210)
T 3mvs_A 152 SPFFAIDSARGIVTVIQELDYEVTQAYQLTVNATDQDKTRPLSTLANLAIIITDMQDMD 210 (210)
T ss_dssp CSSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEECCSSSCCEEEEEEEEEEECCCCCC
T ss_pred CCCEEEeCCcEEEEECCcCCCcccceEEEEEEEEECCCCCCCEEEEEEEEEEEccCCCC
Confidence 3456666 579999999999999999999999999884 67899999999999999986
No 38
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.29 E-value=5.8e-13 Score=79.62 Aligned_cols=47 Identities=28% Similarity=0.280 Sum_probs=41.6
Q ss_pred EEEecCCCCCcEeecCcce-EEeCCCCCCcEEEEEEEEeCCCCCCCceE
Q psy11095 52 IILEDVNDEIPLFTEREQE-TVLEGEPIGSKVTQVNAIDKDGTFPNNQL 99 (102)
Q Consensus 52 i~v~d~Nd~~P~f~~~~~~-~v~E~~~~g~~v~~v~a~D~D~~~~~~~~ 99 (102)
++|.|+|||+|.|.+..|. .|+|+.++|+.|+++.|+|+|.| .++.+
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g-~n~~i 49 (119)
T 2yst_A 2 SSGSSGNDNSPRFEKSVYEADLAENSAPGTPILQLRAADLDVG-VNGQI 49 (119)
T ss_dssp CCCCCSCCCCCCCSSSEEEEEEETTCCTTCEEEECCCCCSSSS-CCSCC
T ss_pred CeEecCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCC-CCCeE
Confidence 4589999999999999886 99999999999999999999998 44443
No 39
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.27 E-value=1.8e-11 Score=72.66 Aligned_cols=51 Identities=27% Similarity=0.281 Sum_probs=45.2
Q ss_pred ccEEECC-ceeEEEcCcCCcccCCEEEEEEEEEECCCCCceeeEEEEEEEecCC
Q psy11095 6 LCYLLFT-WADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVN 58 (102)
Q Consensus 6 ~~f~~~~-~G~i~~~~~LD~E~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d~N 58 (102)
..|.+++ +|.|+++++||||....|.|.|.|+|.+.++ +.+.|+|.|+|+|
T Consensus 63 ~~F~Id~~tG~I~~~~~LD~E~~~~y~l~V~A~D~g~~~--~~~~v~I~V~DvN 114 (114)
T 2ee0_A 63 RLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTP--ARATVTINVTDVN 114 (114)
T ss_dssp HHEEECTTTCEEEECSCCCTTTCSEEEEEEEEESSSSSC--EEEEEEEEEECCC
T ss_pred ceEEEeCCeeEEEECccCCcccCcEEEEEEEEEECCCCc--eEEEEEEEEEECC
Confidence 3566664 7999999999999999999999999998875 7789999999997
No 40
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=99.00 E-value=2.3e-09 Score=69.26 Aligned_cols=51 Identities=25% Similarity=0.277 Sum_probs=45.7
Q ss_pred ccEEECCceeEEEc-CcCCcccCCEEEEEEEEEEC-CCCCceeeEEEEEEEec
Q psy11095 6 LCYLLFTWADIKVN-HPLDYETIKEYNLTIRVENN-GAQQLASEATVHIILED 56 (102)
Q Consensus 6 ~~f~~~~~G~i~~~-~~LD~E~~~~~~l~v~a~d~-~~~~~~~~~~v~i~v~d 56 (102)
.+|.++.+|.|+++ ++||||....|.|.|.|+|. |.|++++.+.|+|+|.|
T Consensus 151 ~~F~I~~tG~i~~~~~~LD~E~~~~y~l~V~A~D~~G~p~~s~t~~v~I~V~D 203 (203)
T 3ppe_A 151 EYFTVDDSGVIFTARADLDRESQSAYEIIVKAKDALGLTGESSTATVIIRLTD 203 (203)
T ss_dssp TTEEECTTSEEEESCSCCCTTTCSEEEEEEEEEETTCCCCSSSEEEEEEEEEC
T ss_pred CcEEEeCCeEEEECCcCCCcccCCEEEEEEEEEeCCCCCCCeEEEEEEEEEEC
Confidence 46777777999999 99999999999999999998 66778999999999986
No 41
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=98.95 E-value=2.2e-09 Score=69.65 Aligned_cols=51 Identities=22% Similarity=0.267 Sum_probs=45.4
Q ss_pred ccEEEC-CceeEEEc-CcCCcccCCEEEEEEEEEECCCCCceeeEEEEEEEec
Q psy11095 6 LCYLLF-TWADIKVN-HPLDYETIKEYNLTIRVENNGAQQLASEATVHIILED 56 (102)
Q Consensus 6 ~~f~~~-~~G~i~~~-~~LD~E~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d 56 (102)
..|.++ .+|.|++. ++||||....|.|.|.|+|.+.+++++.+.|+|.|.|
T Consensus 161 ~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~A~D~g~~~~s~t~~v~I~V~D 213 (213)
T 3qrb_A 161 NMFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGEGLSTTAKAVITVKD 213 (213)
T ss_dssp CSEEECTTTCEEEECSSCCCTTTCCEEEEEEEEETGGGTSCEEEEEEEEEEEC
T ss_pred CeEEEECCCcEEEEccCCCCCccCceEEEEEEEEeCCCCCceEEEEEEEEEEC
Confidence 355665 57999997 7899999999999999999998999999999999986
No 42
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=98.89 E-value=3.3e-09 Score=68.63 Aligned_cols=51 Identities=27% Similarity=0.382 Sum_probs=43.0
Q ss_pred ccEEECC-ceeEEEc-CcCCcccCCEEEEEEEEEECCCC--CceeeEEEEEEEec
Q psy11095 6 LCYLLFT-WADIKVN-HPLDYETIKEYNLTIRVENNGAQ--QLASEATVHIILED 56 (102)
Q Consensus 6 ~~f~~~~-~G~i~~~-~~LD~E~~~~~~l~v~a~d~~~~--~~~~~~~v~i~v~d 56 (102)
.+|.+++ +|.|++. ++||||....|.|.|.|+|.+.+ ++++.+.|+|+|.|
T Consensus 153 ~~F~Id~~tG~i~~~~~~lD~E~~~~y~l~V~A~D~g~~~~~~s~t~~v~I~V~D 207 (207)
T 3lnd_A 153 PYFSVESETGIIKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTVNITLTD 207 (207)
T ss_dssp GGEEECTTTCEEEECCSSCCC--CCEEEEEEEEESGGGCTTCBEEEEEEEEEEEC
T ss_pred CCEEEcCCCcEEEECcccCCcccCCEEEEEEEEEECCCCCCCcEeEEEEEEEEeC
Confidence 3566654 7999999 89999999999999999999876 78999999999986
No 43
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=98.86 E-value=4.8e-09 Score=68.32 Aligned_cols=52 Identities=25% Similarity=0.306 Sum_probs=45.0
Q ss_pred CccEEECC-ceeEEEc-CcCCcccCCEEEEEEEEEECCCC---CceeeEEEEEEEec
Q psy11095 5 FLCYLLFT-WADIKVN-HPLDYETIKEYNLTIRVENNGAQ---QLASEATVHIILED 56 (102)
Q Consensus 5 ~~~f~~~~-~G~i~~~-~~LD~E~~~~~~l~v~a~d~~~~---~~~~~~~v~i~v~d 56 (102)
...|.+++ +|.|++. ++||||....|.|.|.|+|.+++ ++++.+.|+|.|.|
T Consensus 159 ~~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~a~D~g~~p~~~ls~t~~v~I~V~D 215 (215)
T 2qvi_A 159 PNMFTINNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSNTATAVITVTD 215 (215)
T ss_dssp TTCEEECTTTCEEEECSCCCCTTTCSEEEEEEECCTTTTCTTTSCCCEEEEEEEECC
T ss_pred CCeEEEcCCCcEEEEecCCCCcccCCeEEEEEEEEECCCCCCCCcceEEEEEEEEEC
Confidence 34566665 6999996 78999999999999999999877 78999999999986
No 44
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus}
Probab=98.85 E-value=1.2e-08 Score=59.38 Aligned_cols=50 Identities=22% Similarity=0.213 Sum_probs=37.3
Q ss_pred ccEEEC-CceeEEEcCcCCcccCC------EEEEEEEEEECCCCCceeeEEEEEEEecCCCC
Q psy11095 6 LCYLLF-TWADIKVNHPLDYETIK------EYNLTIRVENNGAQQLASEATVHIILEDVNDE 60 (102)
Q Consensus 6 ~~f~~~-~~G~i~~~~~LD~E~~~------~~~l~v~a~d~~~~~~~~~~~v~i~v~d~Nd~ 60 (102)
.+|.++ .+|.|+++++||||... .|.+.+.+ . .| . ..+.+.|.|+|+|||
T Consensus 47 ~~F~Id~~tG~i~~~~~LDRE~~~~~~~~~~~~~~v~~--~-~p-~-~~~~v~I~V~DiNDN 103 (103)
T 1wuz_A 47 DLLEVNLQNGILFVNSRIDREELCGRSAECSIHLEVIV--D-RP-L-QVFHVEVEVRDINDN 103 (103)
T ss_dssp CSEEEETTTTEEEECSCCSHHHHCSSSSSCEEEEEEEE--T-TT-T-EEEEEEEEEECCSCC
T ss_pred cEEEEECCeEEEEECCcCccccccCCCCcEEEEEEEEE--C-CC-C-EEEEEEEEEEEcCCC
Confidence 455555 57999999999999863 55666554 2 23 3 378899999999997
No 45
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=98.82 E-value=2.1e-08 Score=65.26 Aligned_cols=51 Identities=27% Similarity=0.340 Sum_probs=43.9
Q ss_pred ccEEEC-CceeEEEc---CcCCccc--CCEEEEEEEEEECC--CCCceeeEEEEEEEec
Q psy11095 6 LCYLLF-TWADIKVN---HPLDYET--IKEYNLTIRVENNG--AQQLASEATVHIILED 56 (102)
Q Consensus 6 ~~f~~~-~~G~i~~~---~~LD~E~--~~~~~l~v~a~d~~--~~~~~~~~~v~i~v~d 56 (102)
.+|.++ .+|.|++. ++||||. ...|.|.|.|+|.+ .|++++.+.|+|.|.|
T Consensus 160 ~~F~Id~~tG~i~~~~~~~~LD~E~~~~~~y~l~V~a~D~gg~~p~~sst~~v~I~V~D 218 (218)
T 3k5r_A 160 NMFYIDPEKGDIVTVVSPALLDRETLENPKYELIIEAQDMAGLDVGLTGTATATIVIDD 218 (218)
T ss_dssp CSEEECTTTCEEEECSCGGGCCGGGCSCSEEEEEEEEEECSSTTTTCEEEEEEEEEEEC
T ss_pred CEEEEECCccEEEEeccCCCCCccccCCCeEEEEEEEEECCCCCCCeeEEEEEEEEEEC
Confidence 345555 57999987 6899999 77999999999998 7789999999999986
No 46
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*
Probab=98.71 E-value=3.7e-08 Score=65.32 Aligned_cols=50 Identities=16% Similarity=0.310 Sum_probs=42.4
Q ss_pred cEEEC-C-ceeEEEcCcCCcccCCEEEEEEEEEECCCCC---ceeeEEEEEEEec
Q psy11095 7 CYLLF-T-WADIKVNHPLDYETIKEYNLTIRVENNGAQQ---LASEATVHIILED 56 (102)
Q Consensus 7 ~f~~~-~-~G~i~~~~~LD~E~~~~~~l~v~a~d~~~~~---~~~~~~v~i~v~d 56 (102)
.|.++ + +|.|+++++||||....|.|.|.|+|.|+++ +++.+.|+|.|..
T Consensus 183 ~F~Id~~~tG~i~~~~~LD~E~~~~y~l~V~A~D~G~~~~~~~~~~~~vtVnVe~ 237 (242)
T 4apx_B 183 TFEIPLMLTGNVVLRKRLNYEDKTRYYVIIQANDRAQNLNERRTTTTTLTVDLEH 237 (242)
T ss_dssp HEECSSTTTCCEEECSCCCTTTCCEEEEEEEEEECCSSGGGCCEEEEEEEEEEEC
T ss_pred ceEEcCCCceEEEECCcCChhhCCEEEEEEEEEECCcCchhcccCCceEEEEEee
Confidence 36664 4 7999999999999999999999999999874 6677888888764
No 47
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.56 E-value=6.3e-05 Score=44.73 Aligned_cols=43 Identities=5% Similarity=-0.085 Sum_probs=33.5
Q ss_pred CCCCCcEeecCcce-EEeCCCCCCcEEEEEEEEeCCCCCCCceEE
Q psy11095 57 VNDEIPLFTEREQE-TVLEGEPIGSKVTQVNAIDKDGTFPNNQLL 100 (102)
Q Consensus 57 ~Nd~~P~f~~~~~~-~v~E~~~~g~~v~~v~a~D~D~~~~~~~~~ 100 (102)
.+.++|.|..+.+. .+.|+.++|+.|++|. +|+|.+..+...|
T Consensus 5 ~~r~~p~f~~~~~~v~e~e~~~~gt~v~~v~-~D~D~g~n~~i~Y 48 (123)
T 2yqg_A 5 SSGQKRAWITAPVALREGEDLSKKNPIAKIH-SDLAEERGLKITY 48 (123)
T ss_dssp SSCSCCSSCCCCEEEESSSCCCSSCCCBCCC-CHHHHHHTCCCEE
T ss_pred ccccCCccCCCCEEEEecCCCCCCCEEEEEE-ECCCCCCCceEEE
Confidence 35789999988765 8888899999999999 6999873333333
No 48
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A
Probab=96.08 E-value=0.0026 Score=36.24 Aligned_cols=23 Identities=22% Similarity=0.148 Sum_probs=21.5
Q ss_pred eEEeCCCCC--CcEEEEEEEEeCCC
Q psy11095 70 ETVLEGEPI--GSKVTQVNAIDKDG 92 (102)
Q Consensus 70 ~~v~E~~~~--g~~v~~v~a~D~D~ 92 (102)
..|+|+.++ |+.|++|+|+|+|.
T Consensus 7 ~~V~En~~~~~g~~v~~v~A~D~D~ 31 (99)
T 3k6d_A 7 ISIPENQRIPFPKIVGRVVVSDRIP 31 (99)
T ss_dssp EEEETTCCSCSSEEEEECBCSSCCT
T ss_pred EEEeCCCCCCCCcEEEEEEEECCCC
Confidence 489999999 99999999999997
No 49
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus}
Probab=96.08 E-value=0.0022 Score=36.64 Aligned_cols=29 Identities=21% Similarity=0.043 Sum_probs=23.0
Q ss_pred eEEeCCCC--CCcEEEEEEEEeCCCCCCCceEEe
Q psy11095 70 ETVLEGEP--IGSKVTQVNAIDKDGTFPNNQLLD 101 (102)
Q Consensus 70 ~~v~E~~~--~g~~v~~v~a~D~D~~~~~~~~~~ 101 (102)
..|+|+.+ .|+.|++|+ +|+|.| |+.+.|
T Consensus 8 ~~v~En~~~~~g~~v~~v~-~D~D~g--Ng~v~Y 38 (99)
T 1zvn_A 8 FFVLEEYTGTDPLYVGKLH-SDMDRG--DGSIKY 38 (99)
T ss_dssp EEEEGGGCSSSCEEEEECC-BTTCCS--SSCEEE
T ss_pred EEEECCCCCCCCcEEEEEE-ECCCCC--CCEEEE
Confidence 47899976 689999999 999998 444443
No 50
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus}
Probab=95.92 E-value=0.0053 Score=34.95 Aligned_cols=23 Identities=17% Similarity=0.107 Sum_probs=21.2
Q ss_pred eEEeCCCCC--CcEEEEEEEEeCCC
Q psy11095 70 ETVLEGEPI--GSKVTQVNAIDKDG 92 (102)
Q Consensus 70 ~~v~E~~~~--g~~v~~v~a~D~D~ 92 (102)
..|+||.+. |+.|++|.|+|+|.
T Consensus 8 ~~V~EN~~~~~g~~v~~V~A~D~D~ 32 (100)
T 3k6f_A 8 ILIPENQRQPFPRDVGKVVDSDRPE 32 (100)
T ss_dssp EEEETTCCSSSCEEEEECEETTCCT
T ss_pred EEEeCCCCCCCCcEEEEEEEEcCCC
Confidence 489999998 89999999999997
No 51
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A
Probab=95.83 E-value=0.0033 Score=35.81 Aligned_cols=29 Identities=21% Similarity=0.074 Sum_probs=22.2
Q ss_pred eEEeCCCC--CCcEEEEEEEEeCCCCCCCceEEe
Q psy11095 70 ETVLEGEP--IGSKVTQVNAIDKDGTFPNNQLLD 101 (102)
Q Consensus 70 ~~v~E~~~--~g~~v~~v~a~D~D~~~~~~~~~~ 101 (102)
..|+|+.+ .|+.|+++. +|+|.| |+.+.|
T Consensus 7 ~~v~En~~~p~~~~v~~v~-~D~D~g--N~~v~Y 37 (98)
T 1zxk_A 7 MFVLEEFSGPEPILVGRLH-TDLDPG--SKKIKY 37 (98)
T ss_dssp EEECGGGCSSSCEEEEECC-BCCCCC----CEEE
T ss_pred EEEECCCCCCCCeEEEEEE-ECCCCC--CCEEEE
Confidence 48999985 899999998 999998 454443
No 52
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus}
Probab=95.65 E-value=0.009 Score=33.88 Aligned_cols=23 Identities=13% Similarity=0.004 Sum_probs=20.9
Q ss_pred eEEeCCCCCC--cEEEEEEEEeCCC
Q psy11095 70 ETVLEGEPIG--SKVTQVNAIDKDG 92 (102)
Q Consensus 70 ~~v~E~~~~g--~~v~~v~a~D~D~ 92 (102)
..|+||.+.| +.|++|.|+|+|.
T Consensus 7 ~~v~EN~~~g~~~~v~~V~A~D~D~ 31 (99)
T 3k6i_A 7 ILIPENQRPPFPRSVGKVIRSEGTE 31 (99)
T ss_dssp EEEETTCCSSSCEEEEECEETTCCS
T ss_pred EEEeCCCCCCCCeEEEEEEEEcCCC
Confidence 4899999986 8999999999997
No 53
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}
Probab=94.84 E-value=0.0083 Score=35.59 Aligned_cols=23 Identities=35% Similarity=0.254 Sum_probs=20.9
Q ss_pred eEEeCCCCCCcEEEEEEEEeCCCC
Q psy11095 70 ETVLEGEPIGSKVTQVNAIDKDGT 93 (102)
Q Consensus 70 ~~v~E~~~~g~~v~~v~a~D~D~~ 93 (102)
..|+|+.++|+.|+++ |+|+|.+
T Consensus 15 ~~V~E~~~~Gt~V~~v-a~D~d~~ 37 (125)
T 1wyj_A 15 YSVLEETDRGSLVGNL-AKDLGLS 37 (125)
T ss_dssp EEECSSCCTTCEEEES-TTTTTCC
T ss_pred EEEECCCCCCCEEEEE-EecCCCC
Confidence 4899999999999999 9998876
No 54
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus}
Probab=91.74 E-value=0.011 Score=33.85 Aligned_cols=23 Identities=22% Similarity=0.147 Sum_probs=20.5
Q ss_pred eEEeCCCCCCcEEEEEEEEeCCCC
Q psy11095 70 ETVLEGEPIGSKVTQVNAIDKDGT 93 (102)
Q Consensus 70 ~~v~E~~~~g~~v~~v~a~D~D~~ 93 (102)
..|+|+.++|+.|++| |.|+|.+
T Consensus 7 ~~V~E~~~~Gt~Vg~v-a~D~~~~ 29 (103)
T 1wuz_A 7 YSIPEEAKHGTFVGRI-AQDLGLE 29 (103)
T ss_dssp EEEESSCCTTCBCCCH-HHHHTCC
T ss_pred EEEECCCCCCCEEEEE-EeccCCC
Confidence 3899999999999999 9998864
No 55
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A
Probab=87.60 E-value=0.26 Score=28.16 Aligned_cols=21 Identities=5% Similarity=-0.054 Sum_probs=16.1
Q ss_pred eEEeCCCCCCcE--EEEEEEEeCCCC
Q psy11095 70 ETVLEGEPIGSK--VTQVNAIDKDGT 93 (102)
Q Consensus 70 ~~v~E~~~~g~~--v~~v~a~D~D~~ 93 (102)
..|+|+.++|+. |+++ |.|.+
T Consensus 9 ~~v~En~~~gt~~~v~~v---d~D~g 31 (110)
T 1ncg_A 9 INLPENSRGPFPQELVRI---RSGRD 31 (110)
T ss_dssp EEECSSCCCCSSEEEEEC---CCGGG
T ss_pred EEEeCCCCCCCcEEEEEE---eCCCC
Confidence 489999999994 5555 67766
No 56
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B
Probab=80.48 E-value=1 Score=25.44 Aligned_cols=18 Identities=17% Similarity=0.248 Sum_probs=15.5
Q ss_pred eEEeCCCC--CCcEEEEEEE
Q psy11095 70 ETVLEGEP--IGSKVTQVNA 87 (102)
Q Consensus 70 ~~v~E~~~--~g~~v~~v~a 87 (102)
..|+|+.+ .|..|+++.|
T Consensus 11 ~~V~En~~~~~~~~v~~v~A 30 (105)
T 2omz_B 11 ISCPENEKGPFPKNLVQIKS 30 (105)
T ss_dssp CCEESSCCSSSSEEEEECEE
T ss_pred EEEeCCCCCCCCcEEEEEEC
Confidence 47999988 5889999999
No 57
>2kpn_A Bacillolysin; solution structure, BIG_3 domain, PF07523, PSI BIG-open NESG, cell WALL, hydrolase, peptidoglycan-anchor; NMR {Bacillus cereus atcc 14579}
Probab=78.80 E-value=7 Score=22.21 Aligned_cols=41 Identities=22% Similarity=0.268 Sum_probs=31.0
Q ss_pred EEEcCcCCcccCCEEEEEEEEEECCCCCceeeEEEEEEEecCC
Q psy11095 16 IKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIILEDVN 58 (102)
Q Consensus 16 i~~~~~LD~E~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d~N 58 (102)
|.+...+|......|.++..+.|..+. ..+...+|.|.+..
T Consensus 47 I~V~g~Vdt~k~G~Y~VtY~VtDs~Gn--~~t~trtVtV~~~~ 87 (103)
T 2kpn_A 47 IKVDGEVDTTKAGTYVLTYTVTDSKGH--EVTAKQTVTVKVRE 87 (103)
T ss_dssp CEEESCCCSSSCEEEEEEEEEECTTSC--EEEEEEEEEEECSS
T ss_pred EEEeCcccCCCceEEEEEEEEEcCCCC--EEEEEEEEEEeCCC
Confidence 456677899899999999999997764 34566667776643
No 58
>2yhg_A SDE_182CT, cellulose-binding protein; hydrolase, glycoside hydrolase; HET: BTB; 1.08A {Saccharophagus degradans}
Probab=75.64 E-value=15 Score=26.33 Aligned_cols=40 Identities=23% Similarity=0.315 Sum_probs=31.8
Q ss_pred eeEEEcCcCCcccCCEEEEEEEEEECCCCCceeeEEEEEEE
Q psy11095 14 ADIKVNHPLDYETIKEYNLTIRVENNGAQQLASEATVHIIL 54 (102)
Q Consensus 14 G~i~~~~~LD~E~~~~~~l~v~a~d~~~~~~~~~~~v~i~v 54 (102)
..++++.|-+ +....|.|.++++|.+.|.+++...+.|+|
T Consensus 397 ~~~sft~P~~-~~~~tl~f~LtVTD~~~p~lTs~~rViVtV 436 (437)
T 2yhg_A 397 ASANVQIPSN-AGGKDIHILLTLRDNGSPNLYAYRRVVINV 436 (437)
T ss_dssp SEEEEECCTT-CTTCEEEEEEEEEECSSSCCEEEEEEEEEE
T ss_pred ceEEEEeCCC-CCCcEEEEEEEEEeCCCCCccEEeEEEEEe
Confidence 5666666654 456789999999999988888888888876
No 59
>2yrl_A KIAA1837 protein; PKD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=74.83 E-value=8.9 Score=21.41 Aligned_cols=31 Identities=23% Similarity=0.514 Sum_probs=24.4
Q ss_pred cCCEEEEEEEEEECCCCCceeeEEEEEEEecCC
Q psy11095 26 TIKEYNLTIRVENNGAQQLASEATVHIILEDVN 58 (102)
Q Consensus 26 ~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d~N 58 (102)
....|.+++.++|..+ .+....+.|.|...+
T Consensus 67 ~~G~y~f~LTVtD~~G--~s~s~~v~VtV~~~~ 97 (102)
T 2yrl_A 67 QVGTYVFTLTVKDERN--LQSQSSVNVIVKEES 97 (102)
T ss_dssp CSSEEEEEEEEEBTTC--CEEEEEEEEEEECCS
T ss_pred CCeEEEEEEEEEeCCC--CEEEeEEEEEEcCCC
Confidence 4668999999999765 456778888888765
No 60
>1op4_A Neural-cadherin; beta sandwich, cadherin-like domain, cell adhesion; NMR {Mus musculus} SCOP: b.1.6.1
Probab=71.75 E-value=15 Score=22.60 Aligned_cols=34 Identities=3% Similarity=-0.006 Sum_probs=25.1
Q ss_pred cEEECCceeEEEcCcCCcccCCEEEEEEEEEECCC
Q psy11095 7 CYLLFTWADIKVNHPLDYETIKEYNLTIRVENNGA 41 (102)
Q Consensus 7 ~f~~~~~G~i~~~~~LD~E~~~~~~l~v~a~d~~~ 41 (102)
-|.+..+|.|++++++-.-.. .-.+.|.|.|...
T Consensus 78 dFkV~~DGtVya~r~v~L~~~-~~~F~V~a~D~~t 111 (159)
T 1op4_A 78 DFKVDEDGTVYAVRSFPLTAE-QAKFLIYAQDKET 111 (159)
T ss_dssp EEEEETTTEEEEESCCSCSSS-CEEEEEEEEETTT
T ss_pred CeEEeCCCcEEEecceeecCC-CcEEEEEEEcCCC
Confidence 789999999999999643222 2377789999543
No 61
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=70.82 E-value=16 Score=22.68 Aligned_cols=60 Identities=15% Similarity=0.134 Sum_probs=34.0
Q ss_pred cCCEEEEEEEEEECCCCCceeeEEEEEEEecCCCCCcEeecCcceEEeCC-CC--CC-cEEEEEEEEeCCC
Q psy11095 26 TIKEYNLTIRVENNGAQQLASEATVHIILEDVNDEIPLFTEREQETVLEG-EP--IG-SKVTQVNAIDKDG 92 (102)
Q Consensus 26 ~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d~Nd~~P~f~~~~~~~v~E~-~~--~g-~~v~~v~a~D~D~ 92 (102)
....|.|+++|.|..+... ....+.|.|.+ ..+|.... .-+.+ .. .| ..-++..|.|.|.
T Consensus 59 ~~G~htlta~A~D~aGn~s-~s~~v~vtV~~--~~~Ptv~i----tsP~~g~~~~~~~~vtl~~~AsD~~g 122 (190)
T 3pdd_A 59 AVGAYNLKAVAVLSDGRRI-ESPVTPVLVKV--IVKPTVKL----TAPKSNVVAYGNEFLKITATASDSDG 122 (190)
T ss_dssp CSEEEEEEEEEEETTSCEE-ECCCEEEEEEC--CCCCEEEE----EECCTTCCCBTTSEEEEEEEEECSSS
T ss_pred CCccEEEEEEEEECCCCEe-eecceeEEecc--CCCCceee----cCCCCCcEEecCCeEEEEEEEECCCC
Confidence 3568999999999776432 22345666655 46775432 12221 11 23 4456667777653
No 62
>2y72_A Collagenase, collagenase G; polycystic kidney disease domain, beta barrel, collagen RECO domain, hydrolase; 1.18A {Clostridium histolyticum} PDB: 3jqu_A 3js7_A
Probab=56.63 E-value=21 Score=18.97 Aligned_cols=30 Identities=20% Similarity=0.485 Sum_probs=19.8
Q ss_pred cccCCEEEEEEEEEECCCCCceeeEEEEEEEe
Q psy11095 24 YETIKEYNLTIRVENNGAQQLASEATVHIILE 55 (102)
Q Consensus 24 ~E~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~ 55 (102)
|.....|.+++.+.|..+. .....+.|.|.
T Consensus 55 y~~~G~Y~v~LtVtd~~G~--~~t~~~~V~V~ 84 (85)
T 2y72_A 55 YKKAGTYNVTLKVTDDKGA--TATESFTIEIK 84 (85)
T ss_dssp CSSCEEEEEEEEEEETTSC--EEEEEEEEEEE
T ss_pred cCCCeEEEEEEEEEECCCC--EEEEEEEEEEc
Confidence 5566789999999997664 33445555543
No 63
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=38.72 E-value=51 Score=18.26 Aligned_cols=29 Identities=7% Similarity=0.211 Sum_probs=19.1
Q ss_pred CCEEEEEEEEEECCCCCceeeEEEEEEEec
Q psy11095 27 IKEYNLTIRVENNGAQQLASEATVHIILED 56 (102)
Q Consensus 27 ~~~~~l~v~a~d~~~~~~~~~~~v~i~v~d 56 (102)
...|.|+++|.|..+.. ..+..+.|.|.+
T Consensus 60 ~G~htl~a~AtD~~G~~-~tS~~v~vtV~~ 88 (98)
T 3pe9_A 60 EGNHEISVIAYDDDDAA-STPDSVKIFVKQ 88 (98)
T ss_dssp SEEEEEEEEEEETTCCB-CCCEEEEEEEEC
T ss_pred CccEEEEEEEEECCCCE-EeeeEEEEEECc
Confidence 56899999999977643 234455555553
No 64
>2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens}
Probab=36.28 E-value=89 Score=20.46 Aligned_cols=28 Identities=11% Similarity=0.209 Sum_probs=20.2
Q ss_pred ccCCEEEEEEEEEECCCCCceeeEEEEEE
Q psy11095 25 ETIKEYNLTIRVENNGAQQLASEATVHII 53 (102)
Q Consensus 25 E~~~~~~l~v~a~d~~~~~~~~~~~v~i~ 53 (102)
.....|+++|.|.|..++..+. ..++++
T Consensus 208 k~~TeYsF~V~A~d~~G~~Ss~-e~vtVr 235 (238)
T 2w1n_A 208 NRHTIYNFKIAAKYSNGEVSSK-ESLTLR 235 (238)
T ss_dssp CTTCEEEEEEEEEETTSCBCCC-EEEEEE
T ss_pred CCCCEEEEEEEEEeCCCCcccc-CcEEEE
Confidence 3467899999999988875544 555543
No 65
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=28.15 E-value=85 Score=23.27 Aligned_cols=28 Identities=7% Similarity=0.207 Sum_probs=18.5
Q ss_pred CCEEEEEEEEEECCCCCceeeEEEEEEE
Q psy11095 27 IKEYNLTIRVENNGAQQLASEATVHIIL 54 (102)
Q Consensus 27 ~~~~~l~v~a~d~~~~~~~~~~~v~i~v 54 (102)
...|.|.|+|++..+........+.|.|
T Consensus 747 pG~Y~f~V~a~~~~g~w~~~~~~l~i~I 774 (781)
T 3v9f_A 747 PGKYEFLVKARLHNQDWSEDTTSLRIHI 774 (781)
T ss_dssp SEEEEEEEEEEETTSCCCSCCEEEEEEE
T ss_pred CceEEEEEEEECCCCccCCCceEEEEEE
Confidence 3578888888887765444445566655
No 66
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=27.45 E-value=57 Score=24.10 Aligned_cols=29 Identities=17% Similarity=0.171 Sum_probs=19.3
Q ss_pred CCEEEEEEEEEECCCCCceeeEEEEEEEe
Q psy11095 27 IKEYNLTIRVENNGAQQLASEATVHIILE 55 (102)
Q Consensus 27 ~~~~~l~v~a~d~~~~~~~~~~~v~i~v~ 55 (102)
...|.|.|+|.+..+........+.|.|.
T Consensus 719 pG~Y~f~V~a~~~~g~w~~~~~~l~I~I~ 747 (758)
T 3ott_A 719 YGNYQLIISKLERDGQPSNRPHILNIRIL 747 (758)
T ss_dssp SEEEEEEEEEBCTTSCBCSSCEEEEEEEC
T ss_pred CccEEEEEEEeCCCCCccCccEEEEEEEC
Confidence 35788999988876654444556666653
No 67
>1fjj_A Hypothetical 17.1 kDa protein in MODC-BIOA intergenic region; PEPB family, lipid binding protein; HET: MSE EPE; 1.66A {Escherichia coli} SCOP: b.17.1.2 PDB: 1vi3_A*
Probab=24.56 E-value=88 Score=18.85 Aligned_cols=20 Identities=30% Similarity=0.376 Sum_probs=15.7
Q ss_pred CCCCCcEEEEEEEEeCCCCC
Q psy11095 75 GEPIGSKVTQVNAIDKDGTF 94 (102)
Q Consensus 75 ~~~~g~~v~~v~a~D~D~~~ 94 (102)
+.+.|+.-..+...|+|.+.
T Consensus 39 ~~P~~t~s~ali~~DPDAP~ 58 (159)
T 1fjj_A 39 DVPAGTKSFVVTCYDPDAPT 58 (159)
T ss_dssp CCCTTCCEEEEEEEETTSTT
T ss_pred CCCCCCeEEEEEEECCCCCC
Confidence 44567778889999999874
No 68
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=24.38 E-value=86 Score=23.29 Aligned_cols=28 Identities=14% Similarity=0.291 Sum_probs=18.5
Q ss_pred CCEEEEEEEEEECCCCCceeeEEEEEEE
Q psy11095 27 IKEYNLTIRVENNGAQQLASEATVHIIL 54 (102)
Q Consensus 27 ~~~~~l~v~a~d~~~~~~~~~~~v~i~v 54 (102)
...|.|.|+|.+..+........+.|.|
T Consensus 753 pG~Y~f~V~a~n~~g~w~~~~~~l~i~I 780 (795)
T 4a2l_A 753 QGTYQFLVKAANSDGKWNPIPTALEIIV 780 (795)
T ss_dssp SEEEEEEEEEECTTSCBCSSCEEEEEEE
T ss_pred CCeEEEEEEEECCCCccCCCceEEEEEE
Confidence 3478999999887665433445566655
No 69
>1fux_A Hypothetical 19.5 kDa protein in EMRE-RUS intergenic region; beta protein, unknown function; 1.81A {Escherichia coli} SCOP: b.17.1.2
Probab=23.51 E-value=94 Score=18.87 Aligned_cols=20 Identities=35% Similarity=0.468 Sum_probs=15.6
Q ss_pred CCCCCcEEEEEEEEeCCCCC
Q psy11095 75 GEPIGSKVTQVNAIDKDGTF 94 (102)
Q Consensus 75 ~~~~g~~v~~v~a~D~D~~~ 94 (102)
+.+.|+.-..+...|+|.+.
T Consensus 40 ~~P~~t~s~ali~~DPDAP~ 59 (166)
T 1fux_A 40 GVPEGTKSFAVTVYDPDAPT 59 (166)
T ss_dssp CCCTTCCEEEEEEEETTSTT
T ss_pred CCCCCCeEEEEEEECCCCCC
Confidence 34567778889999999974
No 70
>1wgo_A VPS10 domain-containing receptor sorcs2; polycystic kidney disease, PKD, structural genomics, KIAA1329 protein; NMR {Homo sapiens} SCOP: b.1.3.1
Probab=22.90 E-value=1.1e+02 Score=17.83 Aligned_cols=29 Identities=28% Similarity=0.521 Sum_probs=20.9
Q ss_pred cccCCEEEEEEEEEECCCCCceeeEEEEEEEe
Q psy11095 24 YETIKEYNLTIRVENNGAQQLASEATVHIILE 55 (102)
Q Consensus 24 ~E~~~~~~l~v~a~d~~~~~~~~~~~v~i~v~ 55 (102)
|+....|.+++.|....+ +..+.+.++|.
T Consensus 90 Y~~~GiyrVt~~AeN~~G---~d~a~l~l~Vt 118 (123)
T 1wgo_A 90 YESPGIYRVSVRAENTAG---HDEAVLFVQVS 118 (123)
T ss_dssp CSSCSCEEEEEEEECSSC---EEEEEEEECBC
T ss_pred EeCCCEEEEEEEEEccCC---ceeEEEEEEEe
Confidence 677788999999987654 35566666654
No 71
>2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.86 E-value=1.1e+02 Score=16.95 Aligned_cols=18 Identities=11% Similarity=0.270 Sum_probs=13.7
Q ss_pred ccCCEEEEEEEEEECCCC
Q psy11095 25 ETIKEYNLTIRVENNGAQ 42 (102)
Q Consensus 25 E~~~~~~l~v~a~d~~~~ 42 (102)
+....|.+.|.|.+..+.
T Consensus 88 ~p~t~Y~frV~A~N~~G~ 105 (127)
T 2dmk_A 88 QSGTRYIFIVKAINQAGS 105 (127)
T ss_dssp CSSCEEEEEEEEEESSCE
T ss_pred CCCCEEEEEEEEEeCCCC
Confidence 456689999999887665
No 72
>2gzq_A Phosphatidylethanolamine-binding protein; structural genomics, PSI, protein structure initiative; HET: MSE; 1.30A {Plasmodium vivax} PDB: 2r77_A
Probab=22.39 E-value=1.1e+02 Score=19.11 Aligned_cols=21 Identities=24% Similarity=0.060 Sum_probs=16.5
Q ss_pred CCCCCcEEEEEEEEeCCCCCC
Q psy11095 75 GEPIGSKVTQVNAIDKDGTFP 95 (102)
Q Consensus 75 ~~~~g~~v~~v~a~D~D~~~~ 95 (102)
+.+.|+...++..+|+|.+..
T Consensus 71 ~~~~~~~~ytLvm~DPDaP~~ 91 (200)
T 2gzq_A 71 EEPPEDYCYILFMIDPDFPSR 91 (200)
T ss_dssp SCCCTTEEEEEEEEETTCSCS
T ss_pred cCCCCCceEEEEEECCCCCCC
Confidence 335678899999999998743
No 73
>3n08_A Putative phosphatidylethanolamine-binding protein; eukarytic homolog RAF kinase inhibitor protein (RKIP). csgid structural genomics; 1.25A {Chlamydia trachomatis} SCOP: b.17.1.0
Probab=22.18 E-value=69 Score=19.27 Aligned_cols=20 Identities=20% Similarity=0.024 Sum_probs=15.9
Q ss_pred CCCCCcEEEEEEEEeCCCCC
Q psy11095 75 GEPIGSKVTQVNAIDKDGTF 94 (102)
Q Consensus 75 ~~~~g~~v~~v~a~D~D~~~ 94 (102)
+.+.|+.-+.+...|+|++.
T Consensus 36 ~~P~~tks~ali~~DpDAPs 55 (153)
T 3n08_A 36 DVPREAKSLVLIVEDPDVPP 55 (153)
T ss_dssp CCCTTCCEEEEEEEETTSCT
T ss_pred CCCCCCeEEEEEEECCCCCC
Confidence 44667788889999999883
No 74
>2lv4_A Putative outer membrane or exported protein; antivirulence, adhesion, protein binding; NMR {Salmonella enterica subsp}
Probab=20.83 E-value=39 Score=20.06 Aligned_cols=31 Identities=19% Similarity=0.320 Sum_probs=17.9
Q ss_pred EEEEEEEECCCCCceeeEEEEEEEecCCCCC
Q psy11095 31 NLTIRVENNGAQQLASEATVHIILEDVNDEI 61 (102)
Q Consensus 31 ~l~v~a~d~~~~~~~~~~~v~i~v~d~Nd~~ 61 (102)
.|++...|.....--.++.|++.|.|+|.||
T Consensus 49 DLtvisiDk~vL~PGESA~it~IvKDid~nP 79 (146)
T 2lv4_A 49 DLTVMSIDKSVLSPGESATITTIVKDIDGNP 79 (146)
T ss_dssp GGCEEECCCCCBCTTCEEEEEEECBBTTSCB
T ss_pred CcEEEecCccccCCCcceEEEEEEEeCCCCc
Confidence 3445555544222224577888899997544
Done!