Query psy11097
Match_columns 817
No_of_seqs 481 out of 2864
Neff 8.7
Searched_HMMs 29240
Date Fri Aug 16 17:54:07 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11097.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11097hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1q55_A EP-cadherin, C-cadherin 100.0 1.2E-84 4.2E-89 787.1 38.8 594 87-815 21-687 (880)
2 3q2w_A Cadherin-2; cell adhesi 100.0 2E-78 6.7E-83 703.8 48.5 509 112-815 7-544 (559)
3 3q2v_A Cadherin-1; cell adhesi 100.0 1.1E-75 3.8E-80 679.4 51.5 503 112-815 7-534 (550)
4 1l3w_A EP-cadherin, C-cadherin 100.0 1.7E-76 6E-81 684.9 38.7 505 109-815 10-538 (546)
5 1q55_A EP-cadherin, C-cadherin 100.0 2.5E-75 8.5E-80 705.8 40.3 564 25-684 59-697 (880)
6 3q2w_A Cadherin-2; cell adhesi 100.0 1.6E-73 5.6E-78 662.5 49.4 498 24-682 19-552 (559)
7 3q2v_A Cadherin-1; cell adhesi 100.0 1E-71 3.5E-76 646.2 50.8 485 32-684 27-544 (550)
8 1l3w_A EP-cadherin, C-cadherin 100.0 7E-72 2.4E-76 646.4 41.2 477 31-681 32-545 (546)
9 3ubh_A Neural-cadherin; cell a 100.0 2.2E-62 7.4E-67 549.6 45.4 372 23-452 11-403 (419)
10 3ubh_A Neural-cadherin; cell a 100.0 8.5E-62 2.9E-66 544.7 42.0 389 270-813 9-417 (419)
11 2a62_A Cadherin-8; extracellul 100.0 4.9E-49 1.7E-53 424.0 24.5 283 382-803 8-305 (322)
12 3ubf_A Neural-cadherin; cell a 100.0 8.8E-48 3E-52 415.0 34.2 291 23-370 6-316 (316)
13 2a62_A Cadherin-8; extracellul 100.0 3.2E-47 1.1E-51 409.8 24.2 279 111-451 6-300 (322)
14 3ubf_A Neural-cadherin; cell a 100.0 3.2E-44 1.1E-48 387.2 34.5 299 271-678 5-316 (316)
15 3mvs_A Cadherin-23, otocadheri 100.0 1.7E-37 5.9E-42 314.1 23.1 206 98-370 3-210 (210)
16 2a4e_A Cadherin-11; dimer, cal 100.0 4.9E-36 1.7E-40 303.6 25.6 203 110-372 6-215 (215)
17 2x2u_A Proto-oncogene tyrosine 100.0 1.1E-37 3.7E-42 322.7 11.2 210 102-374 2-245 (246)
18 3mvs_A Cadherin-23, otocadheri 100.0 2.6E-36 8.7E-41 305.5 17.1 199 566-813 3-204 (210)
19 2x2u_A Proto-oncogene tyrosine 100.0 2.3E-36 7.9E-41 312.8 13.2 218 372-682 2-245 (246)
20 2a4e_A Cadherin-11; dimer, cal 100.0 4.3E-35 1.5E-39 296.6 20.8 194 576-813 5-207 (215)
21 2qvi_A Cadherin-2; beta barrel 100.0 2.3E-35 7.8E-40 299.1 18.2 201 578-813 6-214 (215)
22 3qrb_A Cadherin-1; cell adhesi 100.0 1.6E-34 5.5E-39 293.1 17.7 199 578-813 6-212 (213)
23 3ppe_A Vascular endothelial ca 100.0 5.8E-34 2E-38 286.3 21.1 190 577-813 5-202 (203)
24 3k5r_A Cadherin 13; mouse, str 100.0 7.1E-34 2.4E-38 289.5 18.0 198 578-813 7-217 (218)
25 3lnd_A CDH6 protein, cadherin 100.0 1E-34 3.6E-39 293.0 10.4 192 578-813 6-206 (207)
26 2qvi_A Cadherin-2; beta barrel 100.0 1.5E-32 5.2E-37 278.3 21.0 196 111-365 6-215 (215)
27 3ppe_A Vascular endothelial ca 100.0 6.7E-32 2.3E-36 271.3 23.8 193 111-365 6-203 (203)
28 3qrb_A Cadherin-1; cell adhesi 100.0 4.4E-32 1.5E-36 275.2 22.3 197 111-365 6-213 (213)
29 3k5r_A Cadherin 13; mouse, str 100.0 6.9E-32 2.4E-36 274.8 22.7 197 111-365 7-218 (218)
30 3lnd_A CDH6 protein, cadherin 100.0 2.3E-32 7.9E-37 275.8 15.4 195 111-365 6-207 (207)
31 4apx_B Protocadherin-15, otoca 100.0 8.7E-31 3E-35 269.1 13.7 203 575-813 20-236 (242)
32 4apx_B Protocadherin-15, otoca 100.0 3.3E-27 1.1E-31 242.4 21.7 180 257-452 21-219 (242)
33 2yst_A Protocadherin-7; BH-PCD 99.9 5.8E-27 2E-31 214.2 8.3 118 559-679 2-119 (119)
34 2yst_A Protocadherin-7; BH-PCD 99.9 3.6E-24 1.2E-28 195.6 8.8 115 241-371 2-119 (119)
35 2ee0_A Protocadherin-9; Ca dom 99.9 7.4E-24 2.5E-28 191.6 8.1 112 559-675 2-114 (114)
36 2ee0_A Protocadherin-9; Ca dom 99.9 1.3E-22 4.4E-27 183.5 8.1 111 241-367 2-114 (114)
37 2yqg_A Desmoglein-2, HDGC; cad 99.8 1.3E-21 4.3E-26 179.3 7.1 116 564-683 5-122 (123)
38 1ncg_A N-cadherin; cell adhesi 99.8 1.3E-19 4.4E-24 162.5 9.7 101 576-681 6-110 (110)
39 2yqg_A Desmoglein-2, HDGC; cad 99.8 1.5E-19 5.1E-24 165.5 7.2 114 246-375 5-122 (123)
40 1ncg_A N-cadherin; cell adhesi 99.7 1.8E-17 6.1E-22 148.6 10.1 96 110-253 7-110 (110)
41 1wyj_A Protocadherin beta 14; 99.7 3.8E-18 1.3E-22 156.1 3.3 104 110-262 13-124 (125)
42 1wyj_A Protocadherin beta 14; 99.7 6.6E-18 2.3E-22 154.5 3.3 108 256-380 11-122 (125)
43 1zvn_A Mn-cadherin; strand dim 99.7 3E-16 1E-20 137.1 11.0 91 577-673 6-99 (99)
44 1zxk_A Cadherin-8; strand dime 99.7 3.1E-16 1.1E-20 136.9 10.2 91 577-673 5-98 (98)
45 1zvn_A Mn-cadherin; strand dim 99.6 3.4E-16 1.1E-20 136.8 7.4 90 686-813 6-98 (99)
46 1zxk_A Cadherin-8; strand dime 99.6 3.4E-16 1.2E-20 136.6 7.2 90 686-813 5-97 (98)
47 3k6d_A T-cadherin; cell adhesi 99.6 1.1E-15 3.8E-20 133.8 10.5 91 577-673 5-99 (99)
48 3k6f_A T-cadherin; cell adhesi 99.6 3.5E-15 1.2E-19 131.0 11.7 90 578-673 7-100 (100)
49 2omz_B Epithelial-cadherin; le 99.6 2.1E-15 7.2E-20 133.6 9.6 92 578-674 10-105 (105)
50 3k6i_A T-cadherin; cell adhesi 99.6 5.9E-15 2E-19 129.3 12.0 90 578-673 6-99 (99)
51 3k6d_A T-cadherin; cell adhesi 99.6 5.3E-15 1.8E-19 129.5 10.6 73 111-185 6-84 (99)
52 3k6f_A T-cadherin; cell adhesi 99.6 1.8E-14 6.1E-19 126.4 11.6 73 111-185 7-85 (100)
53 3k6i_A T-cadherin; cell adhesi 99.5 3.1E-14 1.1E-18 124.7 11.8 73 111-185 6-84 (99)
54 2omz_B Epithelial-cadherin; le 99.5 9.6E-14 3.3E-18 122.8 9.1 74 111-185 10-89 (105)
55 1wuz_A Pcdha4 protein, CNR-EC1 99.3 2.7E-13 9.3E-18 119.5 2.8 98 256-369 3-103 (103)
56 1wuz_A Pcdha4 protein, CNR-EC1 99.3 3.3E-13 1.1E-17 118.9 2.3 94 576-677 4-103 (103)
57 3pdd_A Glycoside hydrolase, fa 95.3 1.7 5.8E-05 41.8 19.7 28 338-365 153-180 (190)
58 3pdd_A Glycoside hydrolase, fa 95.2 0.38 1.3E-05 46.5 14.7 110 338-460 61-180 (190)
59 1op4_A Neural-cadherin; beta s 92.7 0.31 1E-05 45.2 7.9 80 368-452 31-111 (159)
60 3rb5_A Na/Ca exchange protein; 92.4 8.2 0.00028 39.8 19.3 165 565-744 6-182 (298)
61 3rb5_A Na/Ca exchange protein; 88.7 12 0.00041 38.6 16.4 144 247-415 6-163 (298)
62 2yhg_A SDE_182CT, cellulose-bi 88.1 2.2 7.5E-05 46.2 10.6 69 597-671 365-436 (437)
63 1op4_A Neural-cadherin; beta s 81.5 4.5 0.00015 37.3 7.9 92 248-362 31-122 (159)
64 3us9_A Sodium/calcium exchange 80.4 55 0.0019 33.5 22.3 179 578-768 18-228 (295)
65 3pe9_A Fibronectin(III)-like m 80.0 9.4 0.00032 32.2 8.9 28 338-365 61-88 (98)
66 2kpn_A Bacillolysin; solution 79.2 8.2 0.00028 32.8 8.3 68 96-186 6-73 (103)
67 2kpn_A Bacillolysin; solution 70.3 12 0.00041 31.8 7.0 40 327-370 51-90 (103)
68 2yhg_A SDE_182CT, cellulose-bi 70.1 19 0.00066 38.9 10.3 63 119-184 352-422 (437)
69 3pe9_A Fibronectin(III)-like m 62.1 40 0.0014 28.2 8.7 66 390-460 17-88 (98)
70 3ead_A Na/Ca exchange protein; 60.1 50 0.0017 29.4 9.7 46 567-616 3-48 (137)
71 3gin_A Sodium/calcium exchange 57.3 52 0.0018 30.3 9.4 105 554-673 9-113 (160)
72 3gin_A Sodium/calcium exchange 53.1 1.2E+02 0.0042 27.7 11.2 71 86-163 9-83 (160)
73 2yrl_A KIAA1837 protein; PKD d 52.4 26 0.00088 29.6 6.0 29 338-367 69-97 (102)
74 2yrl_A KIAA1837 protein; PKD d 48.0 26 0.0009 29.5 5.4 31 527-566 68-98 (102)
75 1u2c_A Dystroglycan; IG-like d 39.9 1.3E+02 0.0046 29.5 9.5 66 607-676 33-104 (246)
76 3ead_A Na/Ca exchange protein; 35.0 2.4E+02 0.0081 24.9 11.2 113 98-222 2-131 (137)
77 1u2c_A Dystroglycan; IG-like d 29.5 1.6E+02 0.0056 28.9 8.2 63 498-566 40-104 (246)
78 2y72_A Collagenase, collagenas 25.8 1.1E+02 0.0038 24.4 5.5 47 130-186 27-73 (85)
79 3klq_A Putative pilus anchorin 22.5 4.1E+02 0.014 23.6 9.4 100 234-360 4-105 (141)
80 2y72_A Collagenase, collagenas 21.4 1.4E+02 0.0048 23.8 5.3 27 337-364 58-84 (85)
No 1
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=100.00 E-value=1.2e-84 Score=787.10 Aligned_cols=594 Identities=23% Similarity=0.325 Sum_probs=408.6
Q ss_pred EEEEEEEEecCCCCCeeecCCCCeEEEEe-ccCCCCceEEEEEeecCCCCccEEEEEEecCCCCceEEEcceeEEEeccC
Q psy11097 87 QRVIIHVKDVNDESPYFINRPLPMQAVVQ-LNAPPNTPVFTLQARDPDSDHNIHYFIVRDRTGGRFEVDERSGVVRTRGT 165 (817)
Q Consensus 87 ~~v~I~V~DvNDn~P~F~~~~~~~~~~v~-E~~~~gt~v~~v~A~D~D~g~~~~y~l~~~~~~~~F~Id~~tG~i~~~~~ 165 (817)
+...+.|.|+|||+|+|.+.. |.++|+ |++++|+.|++|+|+|+|.+..++|++. ++.|+|++ +|.|+++++
T Consensus 21 q~~~~~~~d~ndn~P~F~~~~--y~~~v~~e~~~~Gt~V~~v~a~D~D~n~~i~Y~~~----~~~F~Id~-~G~i~~~~~ 93 (880)
T 1q55_A 21 QVVPSINADVSGCKPGFSSAE--YIFSVNRRELERGRKLGKVNFSDCTTRKHGLYDVG----DSRFRVLP-DGTVLVKRH 93 (880)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hheeeecccccCCCCccCCCe--EEEEechhhCCCCCEEEEEEEEeCCCCceEEEEeC----CCCEEECC-CceEEECCc
Confidence 566778999999999998764 677898 9999999999999999996555889874 35899998 899999999
Q ss_pred CCcccccEEEEEEEEEecCCcccccccccCccEEEEEeCCCCCCeeeccceEEEecccccCCCCCCcceEEEEEEEE-Ee
Q psy11097 166 DPFQLDQEYVLYVKAEDQNGRKDERKFQSTPEERLSIVGGKRAPQFYMPSYEAEIPENQKKDTEYPSMTGTATVRIY-TK 244 (817)
Q Consensus 166 ld~e~~~~y~l~v~a~D~~g~~~~~~~~~~~~~~~~i~~~~~~p~f~~~~y~~~i~e~~~~d~~~p~~s~~~~v~I~-V~ 244 (817)
||||.. |.|+|+|+|+++. ..++.|+|. |.
T Consensus 94 Ld~e~~--~~l~V~A~D~~~~-----------------------------------------------~~~~~v~v~~v~ 124 (880)
T 1q55_A 94 VKLHKD--TKFTISTWDARGI-----------------------------------------------KHSTNIAVASKR 124 (880)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccc--eEEEEEEEcCCCC-----------------------------------------------eEEEEEEEEEec
Confidence 999976 9999999997542 112334444 22
Q ss_pred eC----------CCCCCcCcCcee------------eEEEeCCCC--CCcEEEEEEEEeCCCCCceeEEEeecccCCccE
Q psy11097 245 NK----------NDEEPKFSQQVY------------TPNVDENAG--PNTLVTTVVASDKDGDNVSIISVKAKSFADREI 300 (817)
Q Consensus 245 Dv----------NDn~P~f~~~~y------------~~~V~En~~--~gt~v~~v~A~D~D~~~~~i~~~~~~~~~~~~i 300 (817)
+. |+++|.|....| .++|+||++ .+..++++.+ |.|. ++.+
T Consensus 125 ~~~~~~~~~~~~~~~~p~f~~~~~~~~r~~r~~~~~~~~v~En~~~~~~~~v~~v~~-d~d~--------------~~~v 189 (880)
T 1q55_A 125 HRSGEEAHSRSSKLPVLTFPETHTGLKRKKRDWVIPPIKVSENERGPFPKRLVQIKS-NKDR--------------FNKV 189 (880)
T ss_dssp -------------------------------CCCCCCEEEESSCCSSSCEEEEECCC-SGGG--------------SSCE
T ss_pred ccccccccccccccCcccccccccccceeeccccccceEEeCCCCCCCCeEEEEEee-CCCC--------------CceE
Confidence 21 566889987644 689999997 5677777764 4442 4789
Q ss_pred EEEEEeCCC---CCCCeEEeCceeEEEeCccCCccccCCCeEEEEEEEEEeCCC-CceEEEEEEEEEEeeCCCCCcccCC
Q psy11097 301 RYTLKAQGQ---GAGTFNIGPTSGIVKLAKELDFEDLRQPHVYSLIVTATEDSG-GFSTSVELTIRVTDVNDNAPKFELP 376 (817)
Q Consensus 301 ~y~l~~~g~---~~~~F~Id~~tG~i~~~~~LD~E~~~~~~~y~l~V~a~d~~g-~~~~~~~v~I~V~DvNDn~P~f~~~ 376 (817)
+|+|...+. ..+.|.|++.||.|++.++||||.. ..|.|+|+|+|.+| .++.++.|+|+|+|+|||+|+|.+.
T Consensus 190 ~Ysi~~~~~~~~~~~~F~Id~~tG~l~~~~~LDrE~~---~~y~l~v~A~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~ 266 (880)
T 1q55_A 190 YYSITGQGADNPPQGVFRIEWETGWMLVTRPLDREEY---DKYVLSSHAVSENGSPVEEPMEITINVIDQNDNRPKFTQD 266 (880)
T ss_dssp EEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTC---CEEEEEEEEEESSSCBCSCCEEEEEEEECCSCCCCEESSS
T ss_pred EEEEECCCCCCCcCCEEEEECCcCEEEECCccCcccc---CccEEEEEEEECCCCceeeeEEEEEEEEecCCCCCCccCC
Confidence 999985432 2468999999999999999999984 68999999997544 3677899999999999999999999
Q ss_pred CcceEEeeCCCCCCcEEEEEEEEeCCCC---CCceEEEEEec--------CceEEcc-ceeEEEe-eecccCCCCcEEEE
Q psy11097 377 DYQAHNIDEDITTGTSILKVKATDADSG---TNAEIEYHVSD--------DNFAVDS-NGVINNH-KTLDADNNNAYYEF 443 (817)
Q Consensus 377 ~y~~~~V~E~~~~Gt~v~~v~A~D~D~g---~n~~i~y~i~~--------~~F~I~~-~G~i~~~-~~ld~e~~~~~~~l 443 (817)
.|.. .|+|++++|+.|++|.|+|+|.| .|+.++|+|.+ +.|.|++ +|.|++. ++||||.. ..|.|
T Consensus 267 ~y~~-~V~En~~~Gt~V~~v~AtD~D~g~~~~N~~v~Ysi~~~~~~~~~~~~F~Id~~tG~I~~~~~~LDrE~~-~~y~l 344 (880)
T 1q55_A 267 VFRG-SVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIPNLFTINRETGVISLIGTGLDREKF-PEYTL 344 (880)
T ss_dssp CEEE-EEETTCCSSEEEEECCEECCSCCSSSSTTCCEEEEEEESSCCSCSCSEEECTTTCEEEECSCCCCTTTC-CEEEE
T ss_pred cEEE-EEeCCCCCCceeEEEEEEcCCCCCCCcCcEEEEEEcCCCCCcccCCeEEEccCCccEEEecccCCHHHc-ceeEE
Confidence 9987 89999999999999999999998 68999999964 3699998 7999985 79999997 58999
Q ss_pred EEEEecCCc-------eEEEEEEeCCCCCCccCCCccceeEeeccCCcCeEEEEEEE-------------EEEeecCCcc
Q psy11097 444 VITAKDKDV-------DVELDVVDRNNKPPLWDNAIYGPIHIRENVTVSTVVTSVKA-------------RFGFVGGSTS 503 (817)
Q Consensus 444 ~V~a~D~g~-------~v~I~V~d~Nd~~P~f~~~~y~~i~v~E~~~~g~~v~~v~a-------------~~~~~~~~~~ 503 (817)
+|+|+|+|+ +|+|+|.|+|||+|.|.+..|.. .|+|+ ++|+.|+++.| +|++.. +.
T Consensus 345 ~V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~-~V~En-~~gt~V~~v~A~D~D~~~g~n~~v~Ysi~~--~~ 420 (880)
T 1q55_A 345 TVQATDLEGAGLSVEGKAIIQITDANDNAPIFDPKTYTA-LVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRV--NE 420 (880)
T ss_dssp EEEEEHHHHTSCEEECCEEEEEECCCCCCCCBSCSEEEE-EEESS-SCCCEEEEECBCCCSCTTSTTSCEECCBSC--CT
T ss_pred EEEEEECCCCCccceeEEEEEEEeccCCCCCccccceEE-EeecC-CCCcEEEEEEEECCCCCCCCCceEEEEEec--CC
Confidence 999999864 79999999999999999999987 99999 99999999988 455544 46
Q ss_pred cccEEEEc----cccEEEEcccccccccc---cEEEEEEEEeCCccccCCCCCcceeeEEEEEEEeecCCCCCccccCCC
Q psy11097 504 SGQFVIED----ITGVIRLNSKSISLDRD---KYELNVTAVDDGACCANGDQSVHTATAVVVVFITDVNDNKPVFRECST 576 (817)
Q Consensus 504 ~~~F~Id~----~tG~i~~~~~~~~ld~e---~y~l~V~a~D~~~~~~~~~~~~~~~~~~v~I~V~DvNDn~P~f~~~~~ 576 (817)
.+.|.|+. .+|.|++.+ .|||| .|.|+|+|+|++... .+.++++++|+|+|+|+|| +|+|.+ ..
T Consensus 421 ~~~F~I~~d~~~~~G~i~~~~---~LD~E~~~~y~l~V~A~D~~~~~----~~~~sst~tV~I~V~DvND-~P~f~~-~~ 491 (880)
T 1q55_A 421 GGFFNITTDPESNQGILTTAK---GLDFELRKQYVLQITVENAEPFS----VPLPTSTATVTVTVEDVNE-APFFVP-AV 491 (880)
T ss_dssp TSCEEEEECTTTCCEEEEESS---CCCCSSCCCEEEEECCEESSCCS----SCCCCCCEEEEEEEECCCC-CCEESS-CE
T ss_pred CceEEEEecCCCceEEEeccc---CCCcccCCcEEEEEEEEECCCCC----CCCcceeEEEEEEEEeCCC-CCEEec-Cc
Confidence 78999963 689999987 56665 799999999987421 1346889999999999999 999997 78
Q ss_pred ceeEEecCCCCCceEEEEEEecCCCCCCceEEEEEEecCCCCCccEEEecccceEEecccccccCCC--CcEEEEEEEEE
Q psy11097 577 YYPKVEEGAPNGSPVIKVHATDEDKGVNGQVKYSIVQQPNQKGAKFTVDEETGEVVTNKVFDREGDD--GKFVSVTIKAT 654 (817)
Q Consensus 577 ~~~~v~En~~~gt~v~~v~A~D~D~g~n~~v~y~l~~~~~~~~~~F~Id~~tG~i~~~~~lD~E~~~--~~~~~l~V~a~ 654 (817)
|.+.|.|+.++|+.|++|.|+|+|.|.|+.++|+|..++ .++|.|++.+|.|++.++||||... ...|.|+|.|+
T Consensus 492 y~~~V~En~~~Gt~V~~v~A~D~D~g~n~~v~Ysi~~~~---~~~F~Id~~tG~I~~~~~LDrE~~~~~~~~y~l~V~A~ 568 (880)
T 1q55_A 492 SRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYFIGNDP---ARWLTVNKDNGIVTGNGNLDRESEYVKNNTYTVIMLVT 568 (880)
T ss_dssp ECCCBCTTCCSSEEEEECCEECCCTTCCCCEEEEECCCS---SCCCEEETTTTEEEECSCCCTTSSSCCSSCCEEEEEEE
T ss_pred eEEEEeCCCCCCCEEEEEEEEeCCCCCCCcEEEEECCCC---CCCEEEeCCccEEEECCccCcccccCCCCEEEEEEEEE
Confidence 999999999999999999999999999999999998643 3599999999999999999999851 13599999999
Q ss_pred eCCCCCceeEEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCCCCCce-EEEEEecCcCCCCCcceE
Q psy11097 655 DQGEPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDASIGTNILRVSASDEDADNNGA-IVYTLSAPYNQMDLEYFE 733 (817)
Q Consensus 655 D~g~p~~s~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~g~n~~-i~Y~l~~~~~~~~~~~F~ 733 (817)
|+|.|+++++++|+|+|.|+|||+|+|.+. ...|+|+.++|+ + |+|+|+|.+.|+. ++|+|..+. .+.|.
T Consensus 569 D~g~p~~sst~tv~I~V~DvNDn~P~f~~~--~~~v~E~~~~g~-v--v~A~D~D~~~n~~~~~ysl~~~~----~~~f~ 639 (880)
T 1q55_A 569 DDGVSVGTGTGTLILHVLDVNDNGPVPSPR--VFTMCDQNPEPQ-V--LTISDADIPPNTYPYKVSLSHGS----DLTWK 639 (880)
T ss_dssp ECSSSCCCCCEEEECCBCCCCCSCCCBSCC--CEEECSSSCCCE-E--EEBCCSSCTTTTCCCCCBCCSCS----SSSCB
T ss_pred ECCCCCcEeEEEEEEEEEeCCCCCCCccCc--ceEEecCCCCCe-E--EEEecCCCCCCCceEEEEECCCC----CCCeE
Confidence 999999999999999999999999999854 568999999997 3 9999999999997 899997631 22444
Q ss_pred EeCCeeEEEEeeeceEEEEEeeCCCCCCcccEEEeCceeEEEEcccCCcccccEEEEEEEEEeCCCCCCCCCCCCCCccc
Q psy11097 734 IQPESGWIVLKKPLDVYYYIVDSPRNEGKDFFEINLQSGEVFTKVVFDREKQGAYALEVEARDGAPSARPNSDGEPNSAC 813 (817)
Q Consensus 734 Id~~tG~i~~~~~ld~~y~~~~~~~~~~~~~F~Id~~tG~l~~~~~LDrE~~~~y~l~V~a~D~g~p~~~~~~~~~v~v~ 813 (817)
| .. +..+|.|.+ +.+|||.++.|.|.|.|+|+|. ++++.+++|+||
T Consensus 640 i-~~------------------------------~g~~~~l~~-~~~d~~~~~~y~l~V~a~D~g~--lsst~tv~V~V~ 685 (880)
T 1q55_A 640 A-EL------------------------------DSKGTSMLL-SPTQQLKKGDYSIYVLLSDAQN--NPQLTVVNATVC 685 (880)
T ss_dssp C-CB------------------------------CTTSSEEEE-BCSSCCCSSCBCCEEECCSSSC--CCEEEECCEEEC
T ss_pred E-Ec------------------------------ccceeEEEe-ccCccccCCEEEEEEEEEECCc--ceeeEEEEEEEE
Confidence 4 21 233455554 3558999999999999999888 889999999998
Q ss_pred cC
Q psy11097 814 TP 815 (817)
Q Consensus 814 ~~ 815 (817)
.+
T Consensus 686 d~ 687 (880)
T 1q55_A 686 SC 687 (880)
T ss_dssp SC
T ss_pred ec
Confidence 64
No 2
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=100.00 E-value=2e-78 Score=703.77 Aligned_cols=509 Identities=26% Similarity=0.383 Sum_probs=426.8
Q ss_pred EEEeccCCCCceEEEEEeecCCCCcc--EEEEEEecCCC----CceEEEcceeEEEeccCCCcccccEEEEEEEEEecCC
Q psy11097 112 AVVQLNAPPNTPVFTLQARDPDSDHN--IHYFIVRDRTG----GRFEVDERSGVVRTRGTDPFQLDQEYVLYVKAEDQNG 185 (817)
Q Consensus 112 ~~v~E~~~~gt~v~~v~A~D~D~g~~--~~y~l~~~~~~----~~F~Id~~tG~i~~~~~ld~e~~~~y~l~v~a~D~~g 185 (817)
++|+||.+ |+....+.+.+.|.+.| ++|+|.++... ++|.|++.+|+|+++++||||....|.|+|+|+|++|
T Consensus 7 ~~v~En~~-g~~~~~i~~~~~D~~~n~~i~Ysi~~~~~~~~~~~~F~id~~tG~l~~~~~LDrE~~~~y~l~v~a~D~g~ 85 (559)
T 3q2w_A 7 INLPENSR-GPFPQELVRIRSDRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAVDING 85 (559)
T ss_dssp EEEESSCC-CCSSEEEEECCCGGGGTSCEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTS
T ss_pred EEeeCCCC-CCCCeEEEEEeeCCCCCcEEEEEEECCCCCCCCCceEEEeCCceEEEECCccCCCCCceEEEEEEEEECCC
Confidence 45999997 87777787777776654 89999865433 6899999999999999999999999999999999765
Q ss_pred cccccccccCccEEEEEeCCCCCCeeeccceEEEecccccCCCCCCcceEEEEEEEEEeeCCCCCCcCcCceeeEEEeCC
Q psy11097 186 RKDERKFQSTPEERLSIVGGKRAPQFYMPSYEAEIPENQKKDTEYPSMTGTATVRIYTKNKNDEEPKFSQQVYTPNVDEN 265 (817)
Q Consensus 186 ~~~~~~~~~~~~~~~~i~~~~~~p~f~~~~y~~~i~e~~~~d~~~p~~s~~~~v~I~V~DvNDn~P~f~~~~y~~~V~En 265 (817)
|++++++.|+|.|+|+|||+|.|.+..|.++|+|+
T Consensus 86 ---------------------------------------------~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En 120 (559)
T 3q2w_A 86 ---------------------------------------------NQVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEG 120 (559)
T ss_dssp ---------------------------------------------CEEEEEEEEEEEEECCCCCCCEESCSEEEEEEETT
T ss_pred ---------------------------------------------CccceeEEEEEEEEeCCCCCCccCCCeeEEEEeCC
Confidence 34678899999999999999999999999999999
Q ss_pred CCCCcEEEEEEEEeCCCCCceeEEEeecccCCccEEEEEEeCCCC---CCCeEEeCceeEEEeCc-cCCccccCCCeEEE
Q psy11097 266 AGPNTLVTTVVASDKDGDNVSIISVKAKSFADREIRYTLKAQGQG---AGTFNIGPTSGIVKLAK-ELDFEDLRQPHVYS 341 (817)
Q Consensus 266 ~~~gt~v~~v~A~D~D~~~~~i~~~~~~~~~~~~i~y~l~~~g~~---~~~F~Id~~tG~i~~~~-~LD~E~~~~~~~y~ 341 (817)
+++|+.|+++.|+|+|.+.. .|+.++|+|..+... .+.|.|++.+|.|++.+ +||||.. ..|.
T Consensus 121 ~~~Gt~v~~v~A~D~D~g~~----------~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~---~~y~ 187 (559)
T 3q2w_A 121 SKPGTYVMTVTAIDADDPNA----------LNGMLRYRILSQAPSTPSPNMFTINNETGDIITVAAGLDREKV---QQYT 187 (559)
T ss_dssp CCTTCEEEECCEECSSCTTS----------GGGCCEEEEEEEESCCSCTTCEEECTTTCEEEECCSCCCTTTC---CEEE
T ss_pred CCCCcEEEEEEEEcCCCCCC----------CceEEEEEEecCCCCCCCcceEEEeCCceEEEEEeccCCcccC---CEEE
Confidence 99999999999999997631 368899999743221 36899999999999987 9999984 7899
Q ss_pred EEEEEEeCCC----CceEEEEEEEEEEeeCCCCCcccCCCcceEEeeCCCCCCcEEEEEEEEeCCCCC--CceEEEEEec
Q psy11097 342 LIVTATEDSG----GFSTSVELTIRVTDVNDNAPKFELPDYQAHNIDEDITTGTSILKVKATDADSGT--NAEIEYHVSD 415 (817)
Q Consensus 342 l~V~a~d~~g----~~~~~~~v~I~V~DvNDn~P~f~~~~y~~~~V~E~~~~Gt~v~~v~A~D~D~g~--n~~i~y~i~~ 415 (817)
|.|+|+|.+| +++++++|+|+|+|+|||+|+|....|.. .|+|+. +|+.|+++.|+|+|.|. |+.++|+|.+
T Consensus 188 l~V~A~D~~g~p~~~~s~t~~v~I~V~DvNDn~P~f~~~~y~~-~V~En~-~g~~v~~v~a~D~D~~~~~n~~~~y~i~~ 265 (559)
T 3q2w_A 188 LIIQATDMEGNPTYGLSNTATAVITVTDVNDNPPEFTAMTFYG-EVPENR-VDVIVANLTVTDKDQPHTPAWNAAYRISG 265 (559)
T ss_dssp EEEEEEHHHHCTTTCCEEEEEEEEEEECCSCSCCEESSSEEEE-EEESSC-SSEEEEEEEEECCSCTTSTTTSBCCEEEE
T ss_pred EEEEEEECCCCCCCCccceEEEEEEEEeCCCCCCcccccccee-EecCCC-CCcEEEEEEEEcCCCCCCCceeEEEEEec
Confidence 9999997433 48999999999999999999999999987 899997 89999999999999986 6688998863
Q ss_pred ----CceEE----cc-ceeEEEeeecccCCCCcEEEEEEEEecCCceEEEEEEeCCCCCCccCCCccceeEeeccCCcCe
Q psy11097 416 ----DNFAV----DS-NGVINNHKTLDADNNNAYYEFVITAKDKDVDVELDVVDRNNKPPLWDNAIYGPIHIRENVTVST 486 (817)
Q Consensus 416 ----~~F~I----~~-~G~i~~~~~ld~e~~~~~~~l~V~a~D~g~~v~I~V~d~Nd~~P~f~~~~y~~i~v~E~~~~g~ 486 (817)
+.|.| ++ +|.|++.++||||..
T Consensus 266 g~~~~~F~I~~~~~~~~G~i~~~~~LD~E~~------------------------------------------------- 296 (559)
T 3q2w_A 266 GDPTGRFAILTDPNSNDGLVTVVKPIDFETN------------------------------------------------- 296 (559)
T ss_dssp SCTTCCEEEEECTTTCEEEEEECSCCCTTTC-------------------------------------------------
T ss_pred CCCCCceEEEecCCCCcEEEEeCCCCCCccC-------------------------------------------------
Confidence 24555 22 455555555555442
Q ss_pred EEEEEEEEEEeecCCcccccEEEEccccEEEEcccccccccccEEEEEEEEeCCccccCCCCCcceeeEEEEEEEeecCC
Q psy11097 487 VVTSVKARFGFVGGSTSSGQFVIEDITGVIRLNSKSISLDRDKYELNVTAVDDGACCANGDQSVHTATAVVVVFITDVND 566 (817)
Q Consensus 487 ~v~~v~a~~~~~~~~~~~~~F~Id~~tG~i~~~~~~~~ld~e~y~l~V~a~D~~~~~~~~~~~~~~~~~~v~I~V~DvND 566 (817)
..|.|+|.|+|++... .+..++++++++|+|+|+|+||
T Consensus 297 -----------------------------------------~~y~l~V~A~D~~~~~-~g~~~~~~s~~~v~I~V~DvND 334 (559)
T 3q2w_A 297 -----------------------------------------RMFVLTVAAENQVPLA-KGIQHPPQSTATVSVTVIDVNE 334 (559)
T ss_dssp -----------------------------------------SEEEEEEECCBSSCCC-TTCCCCGGGEEEEEEEEECCCC
T ss_pred -----------------------------------------ceEEEEEEEEcCCccc-cCCCCCCceEEEEEEEEEeCCC
Confidence 2578888888875321 1222457899999999999999
Q ss_pred CCCccccCCCceeEEecCCCCCceEEEEEEecCCCCCCceEEEEEEecCCCCCccEEEecccceEEecccccccCC--CC
Q psy11097 567 NKPVFRECSTYYPKVEEGAPNGSPVIKVHATDEDKGVNGQVKYSIVQQPNQKGAKFTVDEETGEVVTNKVFDREGD--DG 644 (817)
Q Consensus 567 n~P~f~~~~~~~~~v~En~~~gt~v~~v~A~D~D~g~n~~v~y~l~~~~~~~~~~F~Id~~tG~i~~~~~lD~E~~--~~ 644 (817)
+|.|.+ ..|.+.|.|+.++|+.|++|.|+|+|.|.|+.++|+|..++ ..+|.|++.+|.|++.+.||||.. ..
T Consensus 335 -~P~f~~-~~~~~~v~En~~~g~~v~~v~A~D~D~g~n~~i~Ysi~~~~---~~~f~Id~~tG~i~~~~~lDrE~~~~~~ 409 (559)
T 3q2w_A 335 -NPYFAP-NPKIIRQEEGLHAGTMLTTLTAQDPDRYMQQNIRYTKLSDP---ANWLKIDPVNGQITTIAVLDRESPNVKN 409 (559)
T ss_dssp -CCEESS-SEEEEEEESCCCTTCEEEECCEECSCSSSCCCEEEEEEECT---TCCEEECTTTCEEEESSCCCSSSTTSCS
T ss_pred -CCcccc-cceEEEEeCCCCCCCEEEEEEEECCCCCCCCceEEEEccCC---ccceEecCCceEEEEccccCcccccccC
Confidence 699997 78999999999999999999999999999999999998753 358999999999999999999974 12
Q ss_pred cEEEEEEEEEeCCCCCceeEEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCCCCCc-eEEEEEecC
Q psy11097 645 KFVSVTIKATDQGEPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDASIGTNILRVSASDEDADNNG-AIVYTLSAP 723 (817)
Q Consensus 645 ~~~~l~V~a~D~g~p~~s~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~g~n~-~i~Y~l~~~ 723 (817)
..|.|+|+|+|+|.|+++++++|+|+|+|+|||+|+|.+..+ .++|+ .|..+++|+|+|+|.|.|+ .++|+|...
T Consensus 410 ~~y~l~V~A~D~g~p~~ss~~~v~I~V~DvNDn~P~f~~~~~--~v~e~--~~~~v~~v~A~D~D~~~n~~~~~ysl~~~ 485 (559)
T 3q2w_A 410 NIYNATFLASDNGIPPMSGTGTLQIYLLDINDNAPQVLPQEA--ETCET--PEPNSINITALDYDIDPNAGPFAFDLPLS 485 (559)
T ss_dssp SEEEEEEEEEECSSSCCEEEEEEEEEEECCSCCCCEESCTTC--CCCSC--CCTTCEEECEECSCCTTSSSSCEEECCSS
T ss_pred CEEEEEEEEEcCCCCcceEEEEEEEEEEEccCCCCcccCCce--EEeec--CCCcEEEEEEEcCCCCCCCCCEEEEEcCC
Confidence 569999999999999999999999999999999999987665 57888 4555789999999999987 799999742
Q ss_pred cCCCCCcceEEeCCeeEEEEeeeceEEEEEeeCCCCCCcccEEEeCceeEEEEc-ccCCcccccEEEEEEEEEeCCCCCC
Q psy11097 724 YNQMDLEYFEIQPESGWIVLKKPLDVYYYIVDSPRNEGKDFFEINLQSGEVFTK-VVFDREKQGAYALEVEARDGAPSAR 802 (817)
Q Consensus 724 ~~~~~~~~F~Id~~tG~i~~~~~ld~~y~~~~~~~~~~~~~F~Id~~tG~l~~~-~~LDrE~~~~y~l~V~a~D~g~p~~ 802 (817)
. +...+.|.|++.+|.+.+. ..++++.+..|.|.|+|+|+|.|++
T Consensus 486 ~----------------------------------~~~~~~f~i~~~~G~~~~~~~~~~~~~~~~~~l~V~~~D~g~P~l 531 (559)
T 3q2w_A 486 P----------------------------------VTIKRNWTINRLNGDFAQLNLKIKFLEAGIYEVPIIITDSGNPPK 531 (559)
T ss_dssp S----------------------------------HHHHHHEEEEECSSSCEEEEECSCC-CCEEEEEEEEEECSSSSCC
T ss_pred C----------------------------------CccCCCeEEEecCCCEEEEEeccCcccCcEEEEEEEEEECCCCcc
Confidence 0 0113567777778877554 4679999999999999999999999
Q ss_pred CCCCCCCCccccC
Q psy11097 803 PNSDGEPNSACTP 815 (817)
Q Consensus 803 ~~~~~~~v~v~~~ 815 (817)
+++.+++|+||.|
T Consensus 532 sst~tv~V~V~d~ 544 (559)
T 3q2w_A 532 SNISILRVKVCQC 544 (559)
T ss_dssp EEEEEEEEEEC--
T ss_pred ceeEEEEEEEEeC
Confidence 9999999999975
No 3
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=100.00 E-value=1.1e-75 Score=679.38 Aligned_cols=503 Identities=25% Similarity=0.380 Sum_probs=419.8
Q ss_pred EEEeccCC--CCceEEEEEeecCCCCccEEEEEEecC----CCCceEEEcceeEEEeccCCCcccccEEEEEEEEEecCC
Q psy11097 112 AVVQLNAP--PNTPVFTLQARDPDSDHNIHYFIVRDR----TGGRFEVDERSGVVRTRGTDPFQLDQEYVLYVKAEDQNG 185 (817)
Q Consensus 112 ~~v~E~~~--~gt~v~~v~A~D~D~g~~~~y~l~~~~----~~~~F~Id~~tG~i~~~~~ld~e~~~~y~l~v~a~D~~g 185 (817)
++|+||.+ .++.|++++| |.|.+..++|+|.++. ..++|.|++.+|+|+++++||||....|.|+|+|+|.+|
T Consensus 7 ~~v~En~~~~~~~~v~~v~a-d~d~~~~v~Ysi~~~~~~~~~~~~F~Id~~tG~l~~~~~LDrE~~~~y~l~v~a~d~~~ 85 (550)
T 3q2v_A 7 ISCPENEKGEFPKNLVQIKS-NRDKETKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREAIAKYILYSHAVSSNG 85 (550)
T ss_dssp EEEETTCCSSSSEEEEECEE-GGGGTSCEEEEEESBTTTBSSCSSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTS
T ss_pred EEEeCCCCCCcCeEEEEEec-CCCCCceEEEEEECCCCCCCCCceEEEeCCceEEEECCccCcccCCeeEEEEEEEeCCC
Confidence 45999984 5788999999 8888777999998643 346999999999999999999999999999999999776
Q ss_pred cccccccccCccEEEEEeCCCCCCeeeccceEEEecccccCCCCCCcceEEEEEEEEEeeCCCCCCcCcCceeeEEEeCC
Q psy11097 186 RKDERKFQSTPEERLSIVGGKRAPQFYMPSYEAEIPENQKKDTEYPSMTGTATVRIYTKNKNDEEPKFSQQVYTPNVDEN 265 (817)
Q Consensus 186 ~~~~~~~~~~~~~~~~i~~~~~~p~f~~~~y~~~i~e~~~~d~~~p~~s~~~~v~I~V~DvNDn~P~f~~~~y~~~V~En 265 (817)
. ++++++.|+|.|+|+|||+|.|.+..|.++|+|+
T Consensus 86 ~---------------------------------------------~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~E~ 120 (550)
T 3q2v_A 86 E---------------------------------------------AVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEG 120 (550)
T ss_dssp C---------------------------------------------BCSCCEEEEEEEECCSCCCCCBSCSEEEEEEETT
T ss_pred C---------------------------------------------cccceEEEEEEEEecCCCCCccCCCceEEEEeCC
Confidence 3 2456678999999999999999999999999999
Q ss_pred CCCCcEEEEEEEEeCCCCCceeEEEeecccCCccEEEEEEeCC---CCCCCeEEeCceeEEEe-CccCCccccCCCeEEE
Q psy11097 266 AGPNTLVTTVVASDKDGDNVSIISVKAKSFADREIRYTLKAQG---QGAGTFNIGPTSGIVKL-AKELDFEDLRQPHVYS 341 (817)
Q Consensus 266 ~~~gt~v~~v~A~D~D~~~~~i~~~~~~~~~~~~i~y~l~~~g---~~~~~F~Id~~tG~i~~-~~~LD~E~~~~~~~y~ 341 (817)
+++|+.|+++.|+|+|.+..+ .|+.++|+|..+. ...+.|.|++.+|.|++ .++||||.. ..|.
T Consensus 121 ~~~Gt~v~~v~A~D~D~g~~~---------~N~~i~Ysi~~~~~~~~~~~~F~id~~tG~i~~~~~~LDrE~~---~~y~ 188 (550)
T 3q2v_A 121 AVPGTSVMKVSATDADDDVNT---------YNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTSGLDRESY---PTYT 188 (550)
T ss_dssp CCTTCEEEECCBCCCSCTTTC---------GGGCCEEEEEEEESCCSSSCSEEECTTTCEEEECSSCCCTTTC---SEEE
T ss_pred CCCCCEEEEEEEEeCCCCCCC---------cceEEEEEEecCCCCCCcCCceEEcCCCeEEEEccCCCCcccC---cEEE
Confidence 999999999999999987211 2678999997532 24578999999999998 489999984 7899
Q ss_pred EEEEEEeCCC-CceEEEEEEEEEEeeCCCCCcccCCCcceEEeeCCCCCCcEEEEEEEEeCCCCCCce--EEEEEec---
Q psy11097 342 LIVTATEDSG-GFSTSVELTIRVTDVNDNAPKFELPDYQAHNIDEDITTGTSILKVKATDADSGTNAE--IEYHVSD--- 415 (817)
Q Consensus 342 l~V~a~d~~g-~~~~~~~v~I~V~DvNDn~P~f~~~~y~~~~V~E~~~~Gt~v~~v~A~D~D~g~n~~--i~y~i~~--- 415 (817)
|+|+|+|.++ ++++++.|+|+|+|+|||+|+|....|.. .|+|+ ++|+.|+++.|+|+|.|.|+. ++|+|.+
T Consensus 189 l~V~A~D~g~~~~s~t~~v~I~V~DvNDn~P~F~~~~y~~-~V~En-~~g~~v~~v~a~D~D~~~n~~~~~~ysi~~~~~ 266 (550)
T 3q2v_A 189 LVVQAADLQGEGLSTTAKAVITVKDINDNAPVFNPSTYQG-QVPEN-EVNARIATLKVTDDDAPNTPAWKAVYTVVNDPD 266 (550)
T ss_dssp EEEEEESGGGTSCCCEEEEEEEEECCSCSCCEESSSEEEE-EEESS-CSSCCCEEECEECCSCTTSTTTCEEEEESSCSS
T ss_pred EEEEEEcCCCCCeeEEEEEEEEecccCCCCCEEecceeEE-EEecC-CCCCEEEEEEEEECCCCCCCcEEEEEEEEeCCC
Confidence 9999996433 68999999999999999999999999986 89999 999999999999999998774 5688853
Q ss_pred CceEEc----c-ceeEEEeeecccCCCCcEEEEEEEEecCCceEEEEEEeCCCCCCccCCCccceeEeeccCCcCeEEEE
Q psy11097 416 DNFAVD----S-NGVINNHKTLDADNNNAYYEFVITAKDKDVDVELDVVDRNNKPPLWDNAIYGPIHIRENVTVSTVVTS 490 (817)
Q Consensus 416 ~~F~I~----~-~G~i~~~~~ld~e~~~~~~~l~V~a~D~g~~v~I~V~d~Nd~~P~f~~~~y~~i~v~E~~~~g~~v~~ 490 (817)
+.|.|+ . +|.|++.++||||..
T Consensus 267 ~~F~i~~d~~~~tG~i~~~~~LD~E~~----------------------------------------------------- 293 (550)
T 3q2v_A 267 QQFVVVTDPTTNDGILKTAKGLDFEAK----------------------------------------------------- 293 (550)
T ss_dssp CCEEEEECTTTCCEEEEESSCCCTTTC-----------------------------------------------------
T ss_pred CcEEEEecCCCccEEEEecccCCcccc-----------------------------------------------------
Confidence 245554 2 344444444444432
Q ss_pred EEEEEEeecCCcccccEEEEccccEEEEcccccccccccEEEEEEEEeCCccccCCCCCcceeeEEEEEEEeecCCCCCc
Q psy11097 491 VKARFGFVGGSTSSGQFVIEDITGVIRLNSKSISLDRDKYELNVTAVDDGACCANGDQSVHTATAVVVVFITDVNDNKPV 570 (817)
Q Consensus 491 v~a~~~~~~~~~~~~~F~Id~~tG~i~~~~~~~~ld~e~y~l~V~a~D~~~~~~~~~~~~~~~~~~v~I~V~DvNDn~P~ 570 (817)
..|.|+|+|+|++.. ..+.++++++|+|+|+|+|| +|.
T Consensus 294 -------------------------------------~~y~l~V~a~D~~~~----~~~~~~~~~~v~I~V~DvND-~P~ 331 (550)
T 3q2v_A 294 -------------------------------------QQYILHVRVENEEPF----EGSLVPSTATVTVDVVDVNE-API 331 (550)
T ss_dssp -------------------------------------SEEEEEEEEEESSCC----CSSCCCEEEEEEEEEECCCC-CCE
T ss_pred -------------------------------------ceEEEEEEEEeCCCC----CCCccceEEEEEEEEEecCC-CCe
Confidence 268889999998631 11346889999999999999 999
Q ss_pred cccCCCceeEEecCCCCCceEEEEEEecCCCCCCceEEEEEEecCCCCCccEEEecccceEEecccccccCCC---CcEE
Q psy11097 571 FRECSTYYPKVEEGAPNGSPVIKVHATDEDKGVNGQVKYSIVQQPNQKGAKFTVDEETGEVVTNKVFDREGDD---GKFV 647 (817)
Q Consensus 571 f~~~~~~~~~v~En~~~gt~v~~v~A~D~D~g~n~~v~y~l~~~~~~~~~~F~Id~~tG~i~~~~~lD~E~~~---~~~~ 647 (817)
|.. ..|.+.|+|+.++|+.|+++.|+|+|.|.|+.++|+|..++ ..+|.|++.+|.|++.+.||||... ...|
T Consensus 332 f~~-~~~~~~v~E~~~~gt~v~~v~A~D~D~g~n~~i~y~i~~~~---~~~f~id~~tG~i~~~~~lDrE~~~~~~~~~y 407 (550)
T 3q2v_A 332 FMP-AERRVEVPEDFGVGQEITSYTAREPDTFMDQKITYRIWRDT---ANWLEINPETGAIFTRAEMDREDAEHVKNSTY 407 (550)
T ss_dssp ESS-SSCEEEEETTCCSSCEEEECCEECCCCSTTCCCEEEEEECT---TCCEEECTTTCEEEECSCCCTTCTTTCCSSEE
T ss_pred EcC-cceEEEEecCCCCCCEEEEEeCCCCCCCCCCCEEEEEecCC---CCcEEEeCCCcEEEECCccCcccccccCCCEE
Confidence 997 78999999999999999999999999999999999997643 3589999999999999999999861 1469
Q ss_pred EEEEEEEeCCCCCceeEEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCCCCCce-EEEEEecCcCC
Q psy11097 648 SVTIKATDQGEPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDASIGTNILRVSASDEDADNNGA-IVYTLSAPYNQ 726 (817)
Q Consensus 648 ~l~V~a~D~g~p~~s~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~g~n~~-i~Y~l~~~~~~ 726 (817)
.|+|+|+|+|.|+++++++|+|+|.|+|||+|+|.+ |...|+|+.+.|.. |+|+|+|.+.|+. ++|+|..+.
T Consensus 408 ~l~V~A~D~g~p~~s~~~~v~I~V~DvNDn~P~~~~--~~~~v~e~~~~~~~---v~A~D~D~~~n~~~~~~~l~~~~-- 480 (550)
T 3q2v_A 408 VALIIATDDGSPIATGTGTLLLVLLDVNDNAPIPEP--RNMQFCQRNPQPHI---ITILDPDLPPNTSPFTAELTHGA-- 480 (550)
T ss_dssp EEEEEEECCSSSCCCEEEEEEEEEECCCCCCCEESC--SSCEEESSSCCCEE---EEEECCSCTTSSSSCCCEEEECC--
T ss_pred EEEEEEEeCCCCcceeEEEEEEEEEeCCCCCCcCcC--cccceeecCCCcEE---EEEECCCCCCCCCCEEEEECCCC--
Confidence 999999999999999999999999999999999975 55689999998854 9999999999885 778886531
Q ss_pred CCCcceEEeCCeeEEEEeeeceEEEEEeeCCCCCCcccEEEeCceeEEEEcccCCcccccEEEEEEEEEeCCCCCCCCCC
Q psy11097 727 MDLEYFEIQPESGWIVLKKPLDVYYYIVDSPRNEGKDFFEINLQSGEVFTKVVFDREKQGAYALEVEARDGAPSARPNSD 806 (817)
Q Consensus 727 ~~~~~F~Id~~tG~i~~~~~ld~~y~~~~~~~~~~~~~F~Id~~tG~l~~~~~LDrE~~~~y~l~V~a~D~g~p~~~~~~ 806 (817)
...| .|.++..+|.+...+.+++|..+.|.|.|+|+|+|. +++++
T Consensus 481 --~~~~-------------------------------~~~~~~~~g~~~~~~~~~~~~~~~y~l~V~a~D~g~--lss~~ 525 (550)
T 3q2v_A 481 --SVNW-------------------------------TIEYNDAAQESLILQPRKDLEIGEYKIHLKLADNQN--KDQVT 525 (550)
T ss_dssp --SSSC-------------------------------EEECCSTTSSEEEEECSCC----CEECEEECCSSSC--CCCBC
T ss_pred --CCCe-------------------------------EEEEecCCCcEEEEEecccCCCceEEEEEEEEECCc--ceeEE
Confidence 0111 244444558888888889999999999999999888 89999
Q ss_pred CCCCccccC
Q psy11097 807 GEPNSACTP 815 (817)
Q Consensus 807 ~~~v~v~~~ 815 (817)
+++|+||.+
T Consensus 526 tv~V~V~d~ 534 (550)
T 3q2v_A 526 TLDVHVCDC 534 (550)
T ss_dssp CCEEEEECC
T ss_pred EEEEEEEEe
Confidence 999999965
No 4
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=100.00 E-value=1.7e-76 Score=684.87 Aligned_cols=505 Identities=25% Similarity=0.352 Sum_probs=419.1
Q ss_pred CeEEEEeccCCC--CceEEEEEeecCCCCccEEEEEEecCC----CCceEEEcceeEEEeccCCCcccccEEEEEEEEEe
Q psy11097 109 PMQAVVQLNAPP--NTPVFTLQARDPDSDHNIHYFIVRDRT----GGRFEVDERSGVVRTRGTDPFQLDQEYVLYVKAED 182 (817)
Q Consensus 109 ~~~~~v~E~~~~--gt~v~~v~A~D~D~g~~~~y~l~~~~~----~~~F~Id~~tG~i~~~~~ld~e~~~~y~l~v~a~D 182 (817)
.|.++|+||++. +..|+++.+ |.|.+..++|+|.++.. .++|.|++.+|+|+++++||||....|.|+|+|+|
T Consensus 10 ~~~~~v~En~~g~~~~~v~~~~~-d~d~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~l~~~~~LDrE~~~~y~l~v~A~D 88 (546)
T 1l3w_A 10 IPPIKVSENERGPFPKRLVQIKS-NKDRFNKVYYSITGQGADNPPQGVFRIEWETGWMLVTRPLDREEYDKYVLSSHAVS 88 (546)
T ss_dssp CCCEEEESSCCSSSCEEEEECCC-SGGGSSCEEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEE
T ss_pred cceeEecCCCCCCCCcEEEEEEc-CCCCCceEEEEEECCCCCCCCCceEEEeCCccEEEECCcCCcccCceEEEEEEEEe
Confidence 357789999972 334777764 66655569999987643 36899999999999999999999999999999999
Q ss_pred cCCcccccccccCccEEEEEeCCCCCCeeeccceEEEecccccCCCCCCcceEEEEEEEEEeeCCCCCCcCcCceeeEEE
Q psy11097 183 QNGRKDERKFQSTPEERLSIVGGKRAPQFYMPSYEAEIPENQKKDTEYPSMTGTATVRIYTKNKNDEEPKFSQQVYTPNV 262 (817)
Q Consensus 183 ~~g~~~~~~~~~~~~~~~~i~~~~~~p~f~~~~y~~~i~e~~~~d~~~p~~s~~~~v~I~V~DvNDn~P~f~~~~y~~~V 262 (817)
++|. ++++++.|+|.|.|+|||+|.|.+..|.++|
T Consensus 89 ~~~~---------------------------------------------~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V 123 (546)
T 1l3w_A 89 ENGS---------------------------------------------PVEEPMEITINVIDQNDNRPKFTQDVFRGSV 123 (546)
T ss_dssp SSSC---------------------------------------------BCSCCEEEEEEEECCSCCCCEESSSCEEEEE
T ss_pred CCCC---------------------------------------------cccceEEEEEEEEecccCcCEecCceeEEEE
Confidence 7653 3566789999999999999999999999999
Q ss_pred eCCCCCCcEEEEEEEEeCCCCCceeEEEeecccCCccEEEEEEeCCC---CCCCeEEeCceeEEEeC-ccCCccccCCCe
Q psy11097 263 DENAGPNTLVTTVVASDKDGDNVSIISVKAKSFADREIRYTLKAQGQ---GAGTFNIGPTSGIVKLA-KELDFEDLRQPH 338 (817)
Q Consensus 263 ~En~~~gt~v~~v~A~D~D~~~~~i~~~~~~~~~~~~i~y~l~~~g~---~~~~F~Id~~tG~i~~~-~~LD~E~~~~~~ 338 (817)
+|++++|+.|+++.|+|+|.+.. ..|+.++|+|..+.. ..+.|.|++.||.|++. ++||||.. .
T Consensus 124 ~En~~~gt~v~~v~A~D~D~g~~---------~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~---~ 191 (546)
T 1l3w_A 124 REGVQPGTQVMAVSATDEDDNID---------SLNGVLSYSILKQDPEEPIPNLFTINRETGVISLIGTGLDREKF---P 191 (546)
T ss_dssp ETTCCSSEEEEECCEECCSCCSS---------SSTTCCEEEEEEESSCCSCSCSEEECTTTCEEEECSCCCCTTTC---C
T ss_pred ECCCCCCCEEEEEEEEcCCCCCC---------CCCCEEEEEEeCCCCCcccCCcEEEeCCCceEEEeccCCCcccC---c
Confidence 99999999999999999998610 025789999985332 45799999999999985 79999984 7
Q ss_pred EEEEEEEEEeCCC-CceEEEEEEEEEEeeCCCCCcccCCCcceEEeeCCCCCCcEEEEEEEEeCC--CCCCceEEEEEec
Q psy11097 339 VYSLIVTATEDSG-GFSTSVELTIRVTDVNDNAPKFELPDYQAHNIDEDITTGTSILKVKATDAD--SGTNAEIEYHVSD 415 (817)
Q Consensus 339 ~y~l~V~a~d~~g-~~~~~~~v~I~V~DvNDn~P~f~~~~y~~~~V~E~~~~Gt~v~~v~A~D~D--~g~n~~i~y~i~~ 415 (817)
.|.|+|+|+|.++ ++++++.|+|+|+|+|||+|+|....|.. .|+|+ ++|+.|+++.|+|+| .|.|+.++|+|.+
T Consensus 192 ~y~l~V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~-~V~En-~~gt~v~~v~A~D~D~~~g~n~~v~y~i~~ 269 (546)
T 1l3w_A 192 EYTLTVQATDLEGAGLSVEGKAIIQITDANDNAPIFDPKTYTA-LVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRV 269 (546)
T ss_dssp EEEEEEEEEHHHHTSCEEECCEEEEEECCCCCCCCBSCSEEEE-EEESS-SCCCEEEEECBCCCSCTTSTTSCEECCBSC
T ss_pred eEEEEEEEEECCCCCcceEEEEEEEEeecCCCCCccccccceE-EEEeC-CCCCEEEEEEEEeCCCCCCCCcEEEEEEEe
Confidence 8999999996443 58999999999999999999999999986 89999 999999999999999 7889999999964
Q ss_pred ---CceEEc-----cceeEEEeeecccCCCCcEEEEEEEEecCCceEEEEEEeCCCCCCccCCCccceeEeeccCCcCeE
Q psy11097 416 ---DNFAVD-----SNGVINNHKTLDADNNNAYYEFVITAKDKDVDVELDVVDRNNKPPLWDNAIYGPIHIRENVTVSTV 487 (817)
Q Consensus 416 ---~~F~I~-----~~G~i~~~~~ld~e~~~~~~~l~V~a~D~g~~v~I~V~d~Nd~~P~f~~~~y~~i~v~E~~~~g~~ 487 (817)
+.|.|+ .+|.|+++++||||.. .
T Consensus 270 ~~~~~F~I~~d~~~~~G~i~~~~~LD~E~~-~------------------------------------------------ 300 (546)
T 1l3w_A 270 NEGGFFNITTDPESNQGILTTAKGLDFELR-K------------------------------------------------ 300 (546)
T ss_dssp CTTSCEEEEECTTTCCEEEEESSCCCCSSC-C------------------------------------------------
T ss_pred CCCceEEEEecCCCCeEEEEECccCCcccc-c------------------------------------------------
Confidence 467774 2477777777777664 2
Q ss_pred EEEEEEEEEeecCCcccccEEEEccccEEEEcccccccccccEEEEEEEEeCCccccCCCCCcceeeEEEEEEEeecCCC
Q psy11097 488 VTSVKARFGFVGGSTSSGQFVIEDITGVIRLNSKSISLDRDKYELNVTAVDDGACCANGDQSVHTATAVVVVFITDVNDN 567 (817)
Q Consensus 488 v~~v~a~~~~~~~~~~~~~F~Id~~tG~i~~~~~~~~ld~e~y~l~V~a~D~~~~~~~~~~~~~~~~~~v~I~V~DvNDn 567 (817)
.|.|+|+|+|++.. ..+.++++++|+|+|+|+||
T Consensus 301 -----------------------------------------~y~l~V~a~D~~~~----~~~~~s~~~~v~I~V~DvND- 334 (546)
T 1l3w_A 301 -----------------------------------------QYVLQITVENAEPF----SVPLPTSTATVTVTVEDVNE- 334 (546)
T ss_dssp -----------------------------------------CEEEEECCEESSCC----SSCCCCCCEEEEEEEECCCC-
T ss_pred -----------------------------------------EEEEEEEEEECCCC----CCCCcceeEEEEEEEEcCCC-
Confidence 34555555554421 01336788999999999999
Q ss_pred CCccccCCCceeEEecCCCCCceEEEEEEecCCCCCCceEEEEEEecCCCCCccEEEecccceEEecccccccCCC--Cc
Q psy11097 568 KPVFRECSTYYPKVEEGAPNGSPVIKVHATDEDKGVNGQVKYSIVQQPNQKGAKFTVDEETGEVVTNKVFDREGDD--GK 645 (817)
Q Consensus 568 ~P~f~~~~~~~~~v~En~~~gt~v~~v~A~D~D~g~n~~v~y~l~~~~~~~~~~F~Id~~tG~i~~~~~lD~E~~~--~~ 645 (817)
+|+|.+ ..|.+.|.|+.++|+.|++|.|+|+|.|.|+.++|+|..++ .++|.|++.+|.|++.++||||... ..
T Consensus 335 ~P~f~~-~~y~~~V~En~~~g~~v~~v~A~D~D~g~n~~i~ysi~~~~---~~~F~Id~~tG~i~~~~~lD~E~~~~~~~ 410 (546)
T 1l3w_A 335 APFFVP-AVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYFIGNDP---ARWLTVNKDNGIVTGNGNLDRESEYVKNN 410 (546)
T ss_dssp CCEESS-CEECCCBCTTCCSSEEEEECCEECCCTTCCCCEEEEECCCS---SCCCEEETTTTEEEECSCCCTTSSSCCSS
T ss_pred CCcEec-ceEEEEEeCCCCCCCEEEEEEEECCCCCCCceEEEEECCCC---CCcEEEeCCcEEEEECCccCCccccCCCC
Confidence 999997 68999999999999999999999999999999999998643 3589999999999999999999850 13
Q ss_pred EEEEEEEEEeCCCCCceeEEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCCCCCce-EEEEEecCc
Q psy11097 646 FVSVTIKATDQGEPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDASIGTNILRVSASDEDADNNGA-IVYTLSAPY 724 (817)
Q Consensus 646 ~~~l~V~a~D~g~p~~s~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~g~n~~-i~Y~l~~~~ 724 (817)
.|.|+|+|+|+|.|+++++++|+|+|.|+|||+|+|.+. ...|+|+.++|+ + |+|+|+|.|.|+. ++|+|..+
T Consensus 411 ~y~l~V~a~D~g~p~~s~~~~v~I~V~DvNDn~P~f~~~--~~~v~e~~~~g~-v--v~A~D~D~~~n~~~~~y~l~~~- 484 (546)
T 1l3w_A 411 TYTVIMLVTDDGVSVGTGTGTLILHVLDVNDNGPVPSPR--VFTMCDQNPEPQ-V--LTISDADIPPNTYPYKVSLSHG- 484 (546)
T ss_dssp CCEEEEEEEECSSSCCCCCEEEECCBCCCCCSCCCBSCC--CEEECSSSCCCE-E--EEBCCSSCTTTTCCCCCBCCSC-
T ss_pred EEEEEEEEEECCCCCcEeEEEEEEEEEECCCCcCCccCc--eEEEecCCCCCe-E--EEEEeCCCCCCCccEEEEECCC-
Confidence 489999999999999999999999999999999999843 568999999997 3 9999999999997 89998753
Q ss_pred CCCCCcceEEeCCeeEEEEeeeceEEEEEeeCCCCCCcccEEEeCceeEEEEcccCCcccccEEEEEEEEEeCCCCCCCC
Q psy11097 725 NQMDLEYFEIQPESGWIVLKKPLDVYYYIVDSPRNEGKDFFEINLQSGEVFTKVVFDREKQGAYALEVEARDGAPSARPN 804 (817)
Q Consensus 725 ~~~~~~~F~Id~~tG~i~~~~~ld~~y~~~~~~~~~~~~~F~Id~~tG~l~~~~~LDrE~~~~y~l~V~a~D~g~p~~~~ 804 (817)
..+.|.| ..+ ..++.+.. +.+|||.++.|.|.|.|+|+|. +++
T Consensus 485 ---~~~~f~i-~~~------------------------------g~~~~~~~-~~~d~e~~~~y~l~V~a~D~g~--~s~ 527 (546)
T 1l3w_A 485 ---SDLTWKA-ELD------------------------------SKGTSMLL-SPTQQLKKGDYSIYVLLSDAQN--NPQ 527 (546)
T ss_dssp ---SSSSCBC-CBC------------------------------TTSSEEEE-BCSSCCCSSCBCCEEECCSSSC--CCE
T ss_pred ---CCCCEEE-ecc------------------------------CCceEEEe-cccccccCceEEEEEEEEECCc--Cce
Confidence 1224444 211 12233333 4568999999999999999887 888
Q ss_pred CCCCCCccccC
Q psy11097 805 SDGEPNSACTP 815 (817)
Q Consensus 805 ~~~~~v~v~~~ 815 (817)
+.+++|+||.+
T Consensus 528 ~~~v~I~V~d~ 538 (546)
T 1l3w_A 528 LTVVNATVCSC 538 (546)
T ss_dssp EEECCEEECSC
T ss_pred EEEEEEEEEec
Confidence 99999999853
No 5
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=100.00 E-value=2.5e-75 Score=705.83 Aligned_cols=564 Identities=20% Similarity=0.286 Sum_probs=417.8
Q ss_pred eeeeecccccceeeEeeeeccCCCCcCcEEecCC-eEEEeeeccccccceeeeeecCC-CCCceEEEEEE-EEec-----
Q psy11097 25 RYKIMNSKYLMNCIVNESLKQNMTSIPWIQITDD-AFIIVVNWVIEQLLDRDVINHEV-VHTDNQRVIIH-VKDV----- 96 (817)
Q Consensus 25 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~f~i~~~-~l~~~~~lD~E~~~~~~~~~~~~-~~~~~~~v~I~-V~Dv----- 96 (817)
+++..|.| .|+.+.|++. ..+|.|++. .|+++++||||....+.+.+.++ +...++.|.|. |.+.
T Consensus 59 ~v~a~D~D--~n~~i~Y~~~-----~~~F~Id~~G~i~~~~~Ld~e~~~~l~V~A~D~~~~~~~~~v~v~~v~~~~~~~~ 131 (880)
T 1q55_A 59 KVNFSDCT--TRKHGLYDVG-----DSRFRVLPDGTVLVKRHVKLHKDTKFTISTWDARGIKHSTNIAVASKRHRSGEEA 131 (880)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEEeCC--CCceEEEEeC-----CCCEEECCCceEEECCccccccceEEEEEEEcCCCCeEEEEEEEEEecccccccc
Confidence 34444555 4677888764 247999974 89999999999982223334443 34555666666 3332
Q ss_pred -----CCCCCeeecCCC----------CeEEEEeccCC--CCceEEEEEeecCCCCccEEEEEEecCC----CCceEEEc
Q psy11097 97 -----NDESPYFINRPL----------PMQAVVQLNAP--PNTPVFTLQARDPDSDHNIHYFIVRDRT----GGRFEVDE 155 (817)
Q Consensus 97 -----NDn~P~F~~~~~----------~~~~~v~E~~~--~gt~v~~v~A~D~D~g~~~~y~l~~~~~----~~~F~Id~ 155 (817)
|+++|.|....+ ....+|+||++ .|+.|+++.+ |.|.+..++|+|.+++. .+.|.|++
T Consensus 132 ~~~~~~~~~p~f~~~~~~~~r~~r~~~~~~~~v~En~~~~~~~~v~~v~~-d~d~~~~v~Ysi~~~~~~~~~~~~F~Id~ 210 (880)
T 1q55_A 132 HSRSSKLPVLTFPETHTGLKRKKRDWVIPPIKVSENERGPFPKRLVQIKS-NKDRFNKVYYSITGQGADNPPQGVFRIEW 210 (880)
T ss_dssp ------------------------CCCCCCEEEESSCCSSSCEEEEECCC-SGGGSSCEEEEEEEBTTTBSSTTSEEECT
T ss_pred cccccccCcccccccccccceeeccccccceEEeCCCCCCCCeEEEEEee-CCCCCceEEEEEECCCCCCCcCCEEEEEC
Confidence 556889976421 01467999997 5677888875 66655569999987643 36899999
Q ss_pred ceeEEEeccCCCcccccEEEEEEEEEecCCcccccccccCccEEEEEeCCCCCCeeeccceEEEecccccCCCCCCcceE
Q psy11097 156 RSGVVRTRGTDPFQLDQEYVLYVKAEDQNGRKDERKFQSTPEERLSIVGGKRAPQFYMPSYEAEIPENQKKDTEYPSMTG 235 (817)
Q Consensus 156 ~tG~i~~~~~ld~e~~~~y~l~v~a~D~~g~~~~~~~~~~~~~~~~i~~~~~~p~f~~~~y~~~i~e~~~~d~~~p~~s~ 235 (817)
.+|+|+++++||||....|.|+|+|+|++|. ++++
T Consensus 211 ~tG~l~~~~~LDrE~~~~y~l~v~A~D~g~~---------------------------------------------~~~~ 245 (880)
T 1q55_A 211 ETGWMLVTRPLDREEYDKYVLSSHAVSENGS---------------------------------------------PVEE 245 (880)
T ss_dssp TTCEEEECSCCCTTTCCEEEEEEEEEESSSC---------------------------------------------BCSC
T ss_pred CcCEEEECCccCccccCccEEEEEEEECCCC---------------------------------------------ceee
Confidence 9999999999999999999999999997653 3567
Q ss_pred EEEEEEEEeeCCCCCCcCcCceeeEEEeCCCCCCcEEEEEEEEeCCCCCceeEEEeecccCCccEEEEEEeCCC---CCC
Q psy11097 236 TATVRIYTKNKNDEEPKFSQQVYTPNVDENAGPNTLVTTVVASDKDGDNVSIISVKAKSFADREIRYTLKAQGQ---GAG 312 (817)
Q Consensus 236 ~~~v~I~V~DvNDn~P~f~~~~y~~~V~En~~~gt~v~~v~A~D~D~~~~~i~~~~~~~~~~~~i~y~l~~~g~---~~~ 312 (817)
++.|+|+|+|+|||+|.|.+..|.++|+|++++|+.|++|.|+|+|.+.+. .|+.++|+|..+.. ..+
T Consensus 246 ~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~Gt~V~~v~AtD~D~g~~~---------~N~~v~Ysi~~~~~~~~~~~ 316 (880)
T 1q55_A 246 PMEITINVIDQNDNRPKFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDS---------LNGVLSYSILKQDPEEPIPN 316 (880)
T ss_dssp CEEEEEEEECCSCCCCEESSSCEEEEEETTCCSSEEEEECCEECCSCCSSS---------STTCCEEEEEEESSCCSCSC
T ss_pred eEEEEEEEEecCCCCCCccCCcEEEEEeCCCCCCceeEEEEEEcCCCCCCC---------cCcEEEEEEcCCCCCcccCC
Confidence 789999999999999999999999999999999999999999999987110 36889999985332 457
Q ss_pred CeEEeCceeEEEeC-ccCCccccCCCeEEEEEEEEEeCCC-CceEEEEEEEEEEeeCCCCCcccCCCcceEEeeCCCCCC
Q psy11097 313 TFNIGPTSGIVKLA-KELDFEDLRQPHVYSLIVTATEDSG-GFSTSVELTIRVTDVNDNAPKFELPDYQAHNIDEDITTG 390 (817)
Q Consensus 313 ~F~Id~~tG~i~~~-~~LD~E~~~~~~~y~l~V~a~d~~g-~~~~~~~v~I~V~DvNDn~P~f~~~~y~~~~V~E~~~~G 390 (817)
.|.|++.||.|++. ++||||.. ..|.|+|+|+|.++ +++++++|+|+|+|+|||+|+|....|.. .|+|+ ++|
T Consensus 317 ~F~Id~~tG~I~~~~~~LDrE~~---~~y~l~V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~-~V~En-~~g 391 (880)
T 1q55_A 317 LFTINRETGVISLIGTGLDREKF---PEYTLTVQATDLEGAGLSVEGKAIIQITDANDNAPIFDPKTYTA-LVPEN-EIG 391 (880)
T ss_dssp SEEECTTTCEEEECSCCCCTTTC---CEEEEEEEEEHHHHTSCEEECCEEEEEECCCCCCCCBSCSEEEE-EEESS-SCC
T ss_pred eEEEccCCccEEEecccCCHHHc---ceeEEEEEEEECCCCCccceeEEEEEEEeccCCCCCccccceEE-EeecC-CCC
Confidence 99999999999986 79999984 78999999996443 58999999999999999999999999986 89999 999
Q ss_pred cEEEEEEEEeCC--CCCCceEEEEEec---CceEEc-----cceeEEEeeecccCCCCcEEEEEEEEecCCc--------
Q psy11097 391 TSILKVKATDAD--SGTNAEIEYHVSD---DNFAVD-----SNGVINNHKTLDADNNNAYYEFVITAKDKDV-------- 452 (817)
Q Consensus 391 t~v~~v~A~D~D--~g~n~~i~y~i~~---~~F~I~-----~~G~i~~~~~ld~e~~~~~~~l~V~a~D~g~-------- 452 (817)
+.|+++.|+|+| .|.|+.++|+|.+ +.|.|+ .+|.|++.++||||.. ..|.|+|+|+|++.
T Consensus 392 t~V~~v~A~D~D~~~g~n~~v~Ysi~~~~~~~F~I~~d~~~~~G~i~~~~~LD~E~~-~~y~l~V~A~D~~~~~~~~~ss 470 (880)
T 1q55_A 392 FEVQRLSVTDLDMPGTPAWQAVYKIRVNEGGFFNITTDPESNQGILTTAKGLDFELR-KQYVLQITVENAEPFSVPLPTS 470 (880)
T ss_dssp CEEEEECBCCCSCTTSTTSCEECCBSCCTTSCEEEEECTTTCCEEEEESSCCCCSSC-CCEEEEECCEESSCCSSCCCCC
T ss_pred cEEEEEEEECCCCCCCCCceEEEEEecCCCceEEEEecCCCceEEEecccCCCcccC-CcEEEEEEEEECCCCCCCCcce
Confidence 999999999999 6789999999974 589995 2699999999999997 57999999999751
Q ss_pred --eEEEEEEeCCCCCCccCCCccceeEeeccCCcCeEEEEEEE-----------EEEeecCCcccccEEEEccccEEEEc
Q psy11097 453 --DVELDVVDRNNKPPLWDNAIYGPIHIRENVTVSTVVTSVKA-----------RFGFVGGSTSSGQFVIEDITGVIRLN 519 (817)
Q Consensus 453 --~v~I~V~d~Nd~~P~f~~~~y~~i~v~E~~~~g~~v~~v~a-----------~~~~~~~~~~~~~F~Id~~tG~i~~~ 519 (817)
+|+|+|.|+|| +|.|.+..|.. .|.|++++|+.|+++.| +|++.. ...++|.|++.+|.|++.
T Consensus 471 t~tV~I~V~DvND-~P~f~~~~y~~-~V~En~~~Gt~V~~v~A~D~D~g~n~~v~Ysi~~--~~~~~F~Id~~tG~I~~~ 546 (880)
T 1q55_A 471 TATVTVTVEDVNE-APFFVPAVSRV-DVSEDLSRGEKIISLVAQDPDKQQIQKLSYFIGN--DPARWLTVNKDNGIVTGN 546 (880)
T ss_dssp CEEEEEEEECCCC-CCEESSCEECC-CBCTTCCSSEEEEECCEECCCTTCCCCEEEEECC--CSSCCCEEETTTTEEEEC
T ss_pred eEEEEEEEEeCCC-CCEEecCceEE-EEeCCCCCCCEEEEEEEEeCCCCCCCcEEEEECC--CCCCCEEEeCCccEEEEC
Confidence 79999999999 99999999987 99999999999999998 577654 356899999999999998
Q ss_pred ccccccccc-------cEEEEEEEEeCCccccCCCCCcceeeEEEEEEEeecCCCCCccccCCCceeEEecCCCCCceEE
Q psy11097 520 SKSISLDRD-------KYELNVTAVDDGACCANGDQSVHTATAVVVVFITDVNDNKPVFRECSTYYPKVEEGAPNGSPVI 592 (817)
Q Consensus 520 ~~~~~ld~e-------~y~l~V~a~D~~~~~~~~~~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~~v~En~~~gt~v~ 592 (817)
+ .|||| .|.|+|.|+|+|. ++++++++|+|+|.|+|||+|+|.+ . ...|.|+.+.|+ +
T Consensus 547 ~---~LDrE~~~~~~~~y~l~V~A~D~g~-------p~~sst~tv~I~V~DvNDn~P~f~~-~--~~~v~E~~~~g~-v- 611 (880)
T 1q55_A 547 G---NLDRESEYVKNNTYTVIMLVTDDGV-------SVGTGTGTLILHVLDVNDNGPVPSP-R--VFTMCDQNPEPQ-V- 611 (880)
T ss_dssp S---CCCTTSSSCCSSCCEEEEEEEECSS-------SCCCCCEEEECCBCCCCCSCCCBSC-C--CEEECSSSCCCE-E-
T ss_pred C---ccCcccccCCCCEEEEEEEEEECCC-------CCcEeEEEEEEEEEeCCCCCCCccC-c--ceEEecCCCCCe-E-
Confidence 7 56664 6999999999986 5678999999999999999999974 3 678999999997 3
Q ss_pred EEEEecCCCCCCce-EEEEEEecCCCCCccEEE--ecccceEEecccccccCCCCcEEEEEEEEEeCCCCCceeEEEEEE
Q psy11097 593 KVHATDEDKGVNGQ-VKYSIVQQPNQKGAKFTV--DEETGEVVTNKVFDREGDDGKFVSVTIKATDQGEPSLEGVCSFTV 669 (817)
Q Consensus 593 ~v~A~D~D~g~n~~-v~y~l~~~~~~~~~~F~I--d~~tG~i~~~~~lD~E~~~~~~~~l~V~a~D~g~p~~s~~~~v~I 669 (817)
|.|+|+|.|.|+. ++|+|..+.. ..|.| +..+|.|.. +.+|+|.. ..|.|.|+|+|+|. ++++++|+|
T Consensus 612 -v~A~D~D~~~n~~~~~ysl~~~~~---~~f~i~~~g~~~~l~~-~~~d~~~~--~~y~l~V~a~D~g~--lsst~tv~V 682 (880)
T 1q55_A 612 -LTISDADIPPNTYPYKVSLSHGSD---LTWKAELDSKGTSMLL-SPTQQLKK--GDYSIYVLLSDAQN--NPQLTVVNA 682 (880)
T ss_dssp -EEBCCSSCTTTTCCCCCBCCSCSS---SSCBCCBCTTSSEEEE-BCSSCCCS--SCBCCEEECCSSSC--CCEEEECCE
T ss_pred -EEEecCCCCCCCceEEEEECCCCC---CCeEEEcccceeEEEe-ccCccccC--CEEEEEEEEEECCc--ceeeEEEEE
Confidence 9999999999986 8999976432 36877 444456654 45678876 45999999999987 899999999
Q ss_pred EEEecCCCCCccCCC
Q psy11097 670 EITDVNDNPPLFDRQ 684 (817)
Q Consensus 670 ~V~DvNDn~P~f~~~ 684 (817)
+|.|+|||+|.|...
T Consensus 683 ~V~d~nd~~~~~~~~ 697 (880)
T 1q55_A 683 TVCSCEGKAIKCQEK 697 (880)
T ss_dssp EECSCSSSCCCCC--
T ss_pred EEEecCCCccccccc
Confidence 999999999998743
No 6
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=100.00 E-value=1.6e-73 Score=662.45 Aligned_cols=498 Identities=22% Similarity=0.330 Sum_probs=411.9
Q ss_pred eeeeeecccccceeeEeeeeccCCC---CcCcEEecC--CeEEEeeeccccccceeeee--ecCC-C--CCceEEEEEEE
Q psy11097 24 TRYKIMNSKYLMNCIVNESLKQNMT---SIPWIQITD--DAFIIVVNWVIEQLLDRDVI--NHEV-V--HTDNQRVIIHV 93 (817)
Q Consensus 24 ~~~~~~~~~~~~~~~v~~~~~~~~~---~~~~f~i~~--~~l~~~~~lD~E~~~~~~~~--~~~~-~--~~~~~~v~I~V 93 (817)
..+.-.+.|.+.|+.+.|+|.+... ..++|.|++ |.|+++++||||+++.|.+. +.++ + .+.++.|+|.|
T Consensus 19 ~~i~~~~~D~~~n~~i~Ysi~~~~~~~~~~~~F~id~~tG~l~~~~~LDrE~~~~y~l~v~a~D~g~~~~~~~~~v~I~V 98 (559)
T 3q2w_A 19 QELVRIRSDRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAVDINGNQVENPIDIVINV 98 (559)
T ss_dssp EEEEECCCGGGGTSCEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTSCEEEEEEEEEEEE
T ss_pred eEEEEEeeCCCCCcEEEEEEECCCCCCCCCceEEEeCCceEEEECCccCCCCCceEEEEEEEEECCCCccceeEEEEEEE
Confidence 4455566888899999999976432 347999996 59999999999999999765 4433 2 46778999999
Q ss_pred EecCCCCCeeecCCCCeEEEEeccCCCCceEEEEEeecCCCC--cc--EEEEEEecCCC----CceEEEcceeEEEecc-
Q psy11097 94 KDVNDESPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDSD--HN--IHYFIVRDRTG----GRFEVDERSGVVRTRG- 164 (817)
Q Consensus 94 ~DvNDn~P~F~~~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g--~~--~~y~l~~~~~~----~~F~Id~~tG~i~~~~- 164 (817)
+|+|||+|+|.+.. |.++|+|++++|+.|++|.|+|+|.| .| ++|+|..+... +.|.|++.+|+|++.+
T Consensus 99 ~DvNDn~P~F~~~~--y~~~V~En~~~Gt~v~~v~A~D~D~g~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~ 176 (559)
T 3q2w_A 99 IDMNDNRPEFLHQV--WNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRILSQAPSTPSPNMFTINNETGDIITVAA 176 (559)
T ss_dssp ECCCCCCCEESCSE--EEEEEETTCCTTCEEEECCEECSSCTTSGGGCCEEEEEEEESCCSCTTCEEECTTTCEEEECCS
T ss_pred EeCCCCCCccCCCe--eEEEEeCCCCCCcEEEEEEEEcCCCCCCCceEEEEEEecCCCCCCCcceEEEeCCceEEEEEec
Confidence 99999999998754 78899999999999999999999987 34 99999865443 6899999999999988
Q ss_pred CCCcccccEEEEEEEEEecCCcccccccccCccEEEEEeCCCCCCeeeccceEEEecccccCCCCCCcceEEEEEEEEEe
Q psy11097 165 TDPFQLDQEYVLYVKAEDQNGRKDERKFQSTPEERLSIVGGKRAPQFYMPSYEAEIPENQKKDTEYPSMTGTATVRIYTK 244 (817)
Q Consensus 165 ~ld~e~~~~y~l~v~a~D~~g~~~~~~~~~~~~~~~~i~~~~~~p~f~~~~y~~~i~e~~~~d~~~p~~s~~~~v~I~V~ 244 (817)
.||||....|.|+|+|+|++|.+ .|+++++++|+|+|+
T Consensus 177 ~LD~E~~~~y~l~V~A~D~~g~p------------------------------------------~~~~s~t~~v~I~V~ 214 (559)
T 3q2w_A 177 GLDREKVQQYTLIIQATDMEGNP------------------------------------------TYGLSNTATAVITVT 214 (559)
T ss_dssp CCCTTTCCEEEEEEEEEHHHHCT------------------------------------------TTCCEEEEEEEEEEE
T ss_pred cCCcccCCEEEEEEEEEECCCCC------------------------------------------CCCccceEEEEEEEE
Confidence 89999999999999999976521 135789999999999
Q ss_pred eCCCCCCcCcCceeeEEEeCCCCCCcEEEEEEEEeCCCCCceeEEEeecccCCccEEEEEEeCCCCCCCeEE----eCce
Q psy11097 245 NKNDEEPKFSQQVYTPNVDENAGPNTLVTTVVASDKDGDNVSIISVKAKSFADREIRYTLKAQGQGAGTFNI----GPTS 320 (817)
Q Consensus 245 DvNDn~P~f~~~~y~~~V~En~~~gt~v~~v~A~D~D~~~~~i~~~~~~~~~~~~i~y~l~~~g~~~~~F~I----d~~t 320 (817)
|+|||+|.|.+..|.+.|+|++ +|+.|+++.|+|+|.+.. .++.++|+|. .++..+.|.| ++.+
T Consensus 215 DvNDn~P~f~~~~y~~~V~En~-~g~~v~~v~a~D~D~~~~----------~n~~~~y~i~-~g~~~~~F~I~~~~~~~~ 282 (559)
T 3q2w_A 215 DVNDNPPEFTAMTFYGEVPENR-VDVIVANLTVTDKDQPHT----------PAWNAAYRIS-GGDPTGRFAILTDPNSND 282 (559)
T ss_dssp CCSCSCCEESSSEEEEEEESSC-SSEEEEEEEEECCSCTTS----------TTTSBCCEEE-ESCTTCCEEEEECTTTCE
T ss_pred eCCCCCCccccccceeEecCCC-CCcEEEEEEEEcCCCCCC----------CceeEEEEEe-cCCCCCceEEEecCCCCc
Confidence 9999999999999999999997 899999999999998732 2567999997 4677899999 5789
Q ss_pred eEEEeCccCCccccCCCeEEEEEEEEEeCC----C---CceEEEEEEEEEEeeCCCCCcccCCCcceEEeeCCCCCCcEE
Q psy11097 321 GIVKLAKELDFEDLRQPHVYSLIVTATEDS----G---GFSTSVELTIRVTDVNDNAPKFELPDYQAHNIDEDITTGTSI 393 (817)
Q Consensus 321 G~i~~~~~LD~E~~~~~~~y~l~V~a~d~~----g---~~~~~~~v~I~V~DvNDn~P~f~~~~y~~~~V~E~~~~Gt~v 393 (817)
|.|++.++||||.. ..|.|+|.|+|.+ | .+++++.|+|+|.|+|| +|.|....|.. .|.|+.++|+.|
T Consensus 283 G~i~~~~~LD~E~~---~~y~l~V~A~D~~~~~~g~~~~~~s~~~v~I~V~DvND-~P~f~~~~~~~-~v~En~~~g~~v 357 (559)
T 3q2w_A 283 GLVTVVKPIDFETN---RMFVLTVAAENQVPLAKGIQHPPQSTATVSVTVIDVNE-NPYFAPNPKII-RQEEGLHAGTML 357 (559)
T ss_dssp EEEEECSCCCTTTC---SEEEEEEECCBSSCCCTTCCCCGGGEEEEEEEEECCCC-CCEESSSEEEE-EEESCCCTTCEE
T ss_pred EEEEeCCCCCCccC---ceEEEEEEEEcCCccccCCCCCCceEEEEEEEEEeCCC-CCcccccceEE-EEeCCCCCCCEE
Confidence 99999999999984 7899999999642 2 26889999999999999 69999998876 799999999999
Q ss_pred EEEEEEeCCCCCCceEEEEEec---CceEEcc-ceeEEEeeecccCCCCcEEEEEEEEecCCceEEEEEEeCCCCCCccC
Q psy11097 394 LKVKATDADSGTNAEIEYHVSD---DNFAVDS-NGVINNHKTLDADNNNAYYEFVITAKDKDVDVELDVVDRNNKPPLWD 469 (817)
Q Consensus 394 ~~v~A~D~D~g~n~~i~y~i~~---~~F~I~~-~G~i~~~~~ld~e~~~~~~~l~V~a~D~g~~v~I~V~d~Nd~~P~f~ 469 (817)
++|.|+|+|.|.|+.++|+|.+ +.|.|++ +|.|++.++||||...
T Consensus 358 ~~v~A~D~D~g~n~~i~Ysi~~~~~~~f~Id~~tG~i~~~~~lDrE~~~------------------------------- 406 (559)
T 3q2w_A 358 TTLTAQDPDRYMQQNIRYTKLSDPANWLKIDPVNGQITTIAVLDRESPN------------------------------- 406 (559)
T ss_dssp EECCEECSCSSSCCCEEEEEEECTTCCEEECTTTCEEEESSCCCSSSTT-------------------------------
T ss_pred EEEEEECCCCCCCCceEEEEccCCccceEecCCceEEEEccccCccccc-------------------------------
Confidence 9999999999999999999974 3577776 6777777777776531
Q ss_pred CCccceeEeeccCCcCeEEEEEEEEEEeecCCcccccEEEEccccEEEEcccccccccccEEEEEEEEeCCccccCCCCC
Q psy11097 470 NAIYGPIHIRENVTVSTVVTSVKARFGFVGGSTSSGQFVIEDITGVIRLNSKSISLDRDKYELNVTAVDDGACCANGDQS 549 (817)
Q Consensus 470 ~~~y~~i~v~E~~~~g~~v~~v~a~~~~~~~~~~~~~F~Id~~tG~i~~~~~~~~ld~e~y~l~V~a~D~~~~~~~~~~~ 549 (817)
.....|.|+|.|+|+|. |
T Consensus 407 -------------------------------------------------------~~~~~y~l~V~A~D~g~-------p 424 (559)
T 3q2w_A 407 -------------------------------------------------------VKNNIYNATFLASDNGI-------P 424 (559)
T ss_dssp -------------------------------------------------------SCSSEEEEEEEEEECSS-------S
T ss_pred -------------------------------------------------------ccCCEEEEEEEEEcCCC-------C
Confidence 11235888888898876 5
Q ss_pred cceeeEEEEEEEeecCCCCCccccCCCceeEEecCCCCCceEEEEEEecCCCCCCc-eEEEEEEecCCCCCccEEEeccc
Q psy11097 550 VHTATAVVVVFITDVNDNKPVFRECSTYYPKVEEGAPNGSPVIKVHATDEDKGVNG-QVKYSIVQQPNQKGAKFTVDEET 628 (817)
Q Consensus 550 ~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~~v~En~~~gt~v~~v~A~D~D~g~n~-~v~y~l~~~~~~~~~~F~Id~~t 628 (817)
+++++++|+|.|.|+|||+|.|.. ..+ .+.|+ .+..+++|.|+|+|.|.|+ .++|+|...++...+.|+|++.+
T Consensus 425 ~~ss~~~v~I~V~DvNDn~P~f~~-~~~--~v~e~--~~~~v~~v~A~D~D~~~n~~~~~ysl~~~~~~~~~~f~i~~~~ 499 (559)
T 3q2w_A 425 PMSGTGTLQIYLLDINDNAPQVLP-QEA--ETCET--PEPNSINITALDYDIDPNAGPFAFDLPLSPVTIKRNWTINRLN 499 (559)
T ss_dssp CCEEEEEEEEEEECCSCCCCEESC-TTC--CCCSC--CCTTCEEECEECSCCTTSSSSCEEECCSSSHHHHHHEEEEECS
T ss_pred cceEEEEEEEEEEEccCCCCcccC-Cce--EEeec--CCCcEEEEEEEcCCCCCCCCCEEEEEcCCCCccCCCeEEEecC
Confidence 689999999999999999999985 444 47888 4566889999999999887 89999985432224589999999
Q ss_pred ceEEec-ccccccCCCCcEEEEEEEEEeCCCCCceeEEEEEEEEEecCCCCCccC
Q psy11097 629 GEVVTN-KVFDREGDDGKFVSVTIKATDQGEPSLEGVCSFTVEITDVNDNPPLFD 682 (817)
Q Consensus 629 G~i~~~-~~lD~E~~~~~~~~l~V~a~D~g~p~~s~~~~v~I~V~DvNDn~P~f~ 682 (817)
|.+.+. ..++++.. ..|.|.|+|+|+|.|+++++++|+|.|.|+||+++.+.
T Consensus 500 G~~~~~~~~~~~~~~--~~~~l~V~~~D~g~P~lsst~tv~V~V~d~n~~~~~~~ 552 (559)
T 3q2w_A 500 GDFAQLNLKIKFLEA--GIYEVPIIITDSGNPPKSNISILRVKVCQCDSNGDCTD 552 (559)
T ss_dssp SSCEEEEECSCC-CC--EEEEEEEEEECSSSSCCEEEEEEEEEEC----------
T ss_pred CCEEEEEeccCcccC--cEEEEEEEEEECCCCccceeEEEEEEEEeCCCCCcccc
Confidence 987655 36788765 67999999999999999999999999999999776654
No 7
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=100.00 E-value=1e-71 Score=646.19 Aligned_cols=485 Identities=23% Similarity=0.303 Sum_probs=402.2
Q ss_pred cccceeeEeeeeccCC---CCcCcEEecC--CeEEEeeeccccccceeeee--ecC-C--CCCceEEEEEEEEecCCCCC
Q psy11097 32 KYLMNCIVNESLKQNM---TSIPWIQITD--DAFIIVVNWVIEQLLDRDVI--NHE-V--VHTDNQRVIIHVKDVNDESP 101 (817)
Q Consensus 32 ~~~~~~~v~~~~~~~~---~~~~~f~i~~--~~l~~~~~lD~E~~~~~~~~--~~~-~--~~~~~~~v~I~V~DvNDn~P 101 (817)
|...++.+.|+|.+.. ...++|.|+. |.|+++++||||+++.|.+. +.+ + ..+.++.|+|+|.|+|||+|
T Consensus 27 d~d~~~~v~Ysi~~~~~~~~~~~~F~Id~~tG~l~~~~~LDrE~~~~y~l~v~a~d~~~~~~~~~~~v~I~V~DvNDn~P 106 (550)
T 3q2v_A 27 NRDKETKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRP 106 (550)
T ss_dssp GGGGTSCEEEEEESBTTTBSSCSSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTSCBCSCCEEEEEEEECCSCCCC
T ss_pred CCCCCceEEEEEECCCCCCCCCceEEEeCCceEEEECCccCcccCCeeEEEEEEEeCCCCcccceEEEEEEEEecCCCCC
Confidence 5555888999997632 3356999996 59999999999999999765 332 2 35678999999999999999
Q ss_pred eeecCCCCeEEEEeccCCCCceEEEEEeecCCCC---cc--EEEEEEecC----CCCceEEEcceeEEEe-ccCCCcccc
Q psy11097 102 YFINRPLPMQAVVQLNAPPNTPVFTLQARDPDSD---HN--IHYFIVRDR----TGGRFEVDERSGVVRT-RGTDPFQLD 171 (817)
Q Consensus 102 ~F~~~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g---~~--~~y~l~~~~----~~~~F~Id~~tG~i~~-~~~ld~e~~ 171 (817)
.|.+.. |.++|+|++++|+.|+++.|+|+|.| .| ++|+|.++. ..+.|+|++.+|+|++ .+.||||..
T Consensus 107 ~F~~~~--y~~~V~E~~~~Gt~v~~v~A~D~D~g~~~~N~~i~Ysi~~~~~~~~~~~~F~id~~tG~i~~~~~~LDrE~~ 184 (550)
T 3q2v_A 107 EFTQEV--FEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTSGLDRESY 184 (550)
T ss_dssp CBSCSE--EEEEEETTCCTTCEEEECCBCCCSCTTTCGGGCCEEEEEEEESCCSSSCSEEECTTTCEEEECSSCCCTTTC
T ss_pred ccCCCc--eEEEEeCCCCCCCEEEEEEEEeCCCCCCCcceEEEEEEecCCCCCCcCCceEEcCCCeEEEEccCCCCcccC
Confidence 998754 78899999999999999999999998 44 899998754 3468999999999997 478999999
Q ss_pred cEEEEEEEEEecCCcccccccccCccEEEEEeCCCCCCeeeccceEEEecccccCCCCCCcceEEEEEEEEEeeCCCCCC
Q psy11097 172 QEYVLYVKAEDQNGRKDERKFQSTPEERLSIVGGKRAPQFYMPSYEAEIPENQKKDTEYPSMTGTATVRIYTKNKNDEEP 251 (817)
Q Consensus 172 ~~y~l~v~a~D~~g~~~~~~~~~~~~~~~~i~~~~~~p~f~~~~y~~~i~e~~~~d~~~p~~s~~~~v~I~V~DvNDn~P 251 (817)
+.|.|+|+|+|+|| |+++++++|+|+|+|+|||+|
T Consensus 185 ~~y~l~V~A~D~g~---------------------------------------------~~~s~t~~v~I~V~DvNDn~P 219 (550)
T 3q2v_A 185 PTYTLVVQAADLQG---------------------------------------------EGLSTTAKAVITVKDINDNAP 219 (550)
T ss_dssp SEEEEEEEEESGGG---------------------------------------------TSCCCEEEEEEEEECCSCSCC
T ss_pred cEEEEEEEEEcCCC---------------------------------------------CCeeEEEEEEEEecccCCCCC
Confidence 99999999999754 356899999999999999999
Q ss_pred cCcCceeeEEEeCCCCCCcEEEEEEEEeCCCCCceeEEEeecccCCccEEEEEEeCCCCCCCeEEe----CceeEEEeCc
Q psy11097 252 KFSQQVYTPNVDENAGPNTLVTTVVASDKDGDNVSIISVKAKSFADREIRYTLKAQGQGAGTFNIG----PTSGIVKLAK 327 (817)
Q Consensus 252 ~f~~~~y~~~V~En~~~gt~v~~v~A~D~D~~~~~i~~~~~~~~~~~~i~y~l~~~g~~~~~F~Id----~~tG~i~~~~ 327 (817)
.|.+..|.++|+|| ++|+.|+++.|+|+|.+.+ .+..++|+|. ++..+.|.|+ +.+|.|++.+
T Consensus 220 ~F~~~~y~~~V~En-~~g~~v~~v~a~D~D~~~n----------~~~~~~ysi~--~~~~~~F~i~~d~~~~tG~i~~~~ 286 (550)
T 3q2v_A 220 VFNPSTYQGQVPEN-EVNARIATLKVTDDDAPNT----------PAWKAVYTVV--NDPDQQFVVVTDPTTNDGILKTAK 286 (550)
T ss_dssp EESSSEEEEEEESS-CSSCCCEEECEECCSCTTS----------TTTCEEEEES--SCSSCCEEEEECTTTCCEEEEESS
T ss_pred EEecceeEEEEecC-CCCCEEEEEEEEECCCCCC----------CcEEEEEEEE--eCCCCcEEEEecCCCccEEEEecc
Confidence 99999999999999 9999999999999998742 1234679996 3677899998 7899999999
Q ss_pred cCCccccCCCeEEEEEEEEEeCCC----CceEEEEEEEEEEeeCCCCCcccCCCcceEEeeCCCCCCcEEEEEEEEeCCC
Q psy11097 328 ELDFEDLRQPHVYSLIVTATEDSG----GFSTSVELTIRVTDVNDNAPKFELPDYQAHNIDEDITTGTSILKVKATDADS 403 (817)
Q Consensus 328 ~LD~E~~~~~~~y~l~V~a~d~~g----~~~~~~~v~I~V~DvNDn~P~f~~~~y~~~~V~E~~~~Gt~v~~v~A~D~D~ 403 (817)
+||||.. ..|.|+|+|+|.++ .+++++.|+|+|+|+|| +|.|....|.. .|+|+.++|+.|+++.|+|+|.
T Consensus 287 ~LD~E~~---~~y~l~V~a~D~~~~~~~~~~~~~~v~I~V~DvND-~P~f~~~~~~~-~v~E~~~~gt~v~~v~A~D~D~ 361 (550)
T 3q2v_A 287 GLDFEAK---QQYILHVRVENEEPFEGSLVPSTATVTVDVVDVNE-APIFMPAERRV-EVPEDFGVGQEITSYTAREPDT 361 (550)
T ss_dssp CCCTTTC---SEEEEEEEEEESSCCCSSCCCEEEEEEEEEECCCC-CCEESSSSCEE-EEETTCCSSCEEEECCEECCCC
T ss_pred cCCcccc---ceEEEEEEEEeCCCCCCCccceEEEEEEEEEecCC-CCeEcCcceEE-EEecCCCCCCEEEEEeCCCCCC
Confidence 9999984 78999999997432 27899999999999999 99999999986 8999999999999999999999
Q ss_pred CCCceEEEEEec---CceEEcc-ceeEEEeeecccCCCCcEEEEEEEEecCCceEEEEEEeCCCCCCccCCCccceeEee
Q psy11097 404 GTNAEIEYHVSD---DNFAVDS-NGVINNHKTLDADNNNAYYEFVITAKDKDVDVELDVVDRNNKPPLWDNAIYGPIHIR 479 (817)
Q Consensus 404 g~n~~i~y~i~~---~~F~I~~-~G~i~~~~~ld~e~~~~~~~l~V~a~D~g~~v~I~V~d~Nd~~P~f~~~~y~~i~v~ 479 (817)
|.|+.++|+|.+ +.|.|++ +|.|++.++||||...
T Consensus 362 g~n~~i~y~i~~~~~~~f~id~~tG~i~~~~~lDrE~~~----------------------------------------- 400 (550)
T 3q2v_A 362 FMDQKITYRIWRDTANWLEINPETGAIFTRAEMDREDAE----------------------------------------- 400 (550)
T ss_dssp STTCCCEEEEEECTTCCEEECTTTCEEEECSCCCTTCTT-----------------------------------------
T ss_pred CCCCCEEEEEecCCCCcEEEeCCCcEEEECCccCccccc-----------------------------------------
Confidence 999999999964 4688886 6888888888887641
Q ss_pred ccCCcCeEEEEEEEEEEeecCCcccccEEEEccccEEEEcccccccccccEEEEEEEEeCCccccCCCCCcceeeEEEEE
Q psy11097 480 ENVTVSTVVTSVKARFGFVGGSTSSGQFVIEDITGVIRLNSKSISLDRDKYELNVTAVDDGACCANGDQSVHTATAVVVV 559 (817)
Q Consensus 480 E~~~~g~~v~~v~a~~~~~~~~~~~~~F~Id~~tG~i~~~~~~~~ld~e~y~l~V~a~D~~~~~~~~~~~~~~~~~~v~I 559 (817)
......|.|+|.|+|+|. |+++++++|+|
T Consensus 401 --------------------------------------------~~~~~~y~l~V~A~D~g~-------p~~s~~~~v~I 429 (550)
T 3q2v_A 401 --------------------------------------------HVKNSTYVALIIATDDGS-------PIATGTGTLLL 429 (550)
T ss_dssp --------------------------------------------TCCSSEEEEEEEEECCSS-------SCCCEEEEEEE
T ss_pred --------------------------------------------ccCCCEEEEEEEEEeCCC-------CcceeEEEEEE
Confidence 011235888888888876 56789999999
Q ss_pred EEeecCCCCCccccCCCceeEEecCCCCCceEEEEEEecCCCCCCc-eEEEEEEecCCCCCccEEEecccceEEeccccc
Q psy11097 560 FITDVNDNKPVFRECSTYYPKVEEGAPNGSPVIKVHATDEDKGVNG-QVKYSIVQQPNQKGAKFTVDEETGEVVTNKVFD 638 (817)
Q Consensus 560 ~V~DvNDn~P~f~~~~~~~~~v~En~~~gt~v~~v~A~D~D~g~n~-~v~y~l~~~~~~~~~~F~Id~~tG~i~~~~~lD 638 (817)
+|.|+|||+|+|.. |...+.|+.+.|.. |.|+|+|.+.|+ .++|+|..+... ...|.++..+|.+...+.++
T Consensus 430 ~V~DvNDn~P~~~~---~~~~v~e~~~~~~~---v~A~D~D~~~n~~~~~~~l~~~~~~-~~~~~~~~~~g~~~~~~~~~ 502 (550)
T 3q2v_A 430 VLLDVNDNAPIPEP---RNMQFCQRNPQPHI---ITILDPDLPPNTSPFTAELTHGASV-NWTIEYNDAAQESLILQPRK 502 (550)
T ss_dssp EEECCCCCCCEESC---SSCEEESSSCCCEE---EEEECCSCTTSSSSCCCEEEECCSS-SCEEECCSTTSSEEEEECSC
T ss_pred EEEeCCCCCCcCcC---cccceeecCCCcEE---EEEECCCCCCCCCCEEEEECCCCCC-CeEEEEecCCCcEEEEEecc
Confidence 99999999999963 67789999987754 999999999988 589999876432 22455555569988888999
Q ss_pred ccCCCCcEEEEEEEEEeCCCCCceeEEEEEEEEEecCCCCCccCCC
Q psy11097 639 REGDDGKFVSVTIKATDQGEPSLEGVCSFTVEITDVNDNPPLFDRQ 684 (817)
Q Consensus 639 ~E~~~~~~~~l~V~a~D~g~p~~s~~~~v~I~V~DvNDn~P~f~~~ 684 (817)
+|.. ..|.|.|+|+|+|. ++++++|+|.|.|+|||+|.+...
T Consensus 503 ~~~~--~~y~l~V~a~D~g~--lss~~tv~V~V~d~ndn~~~~~~~ 544 (550)
T 3q2v_A 503 DLEI--GEYKIHLKLADNQN--KDQVTTLDVHVCDCEGTVNNCMKA 544 (550)
T ss_dssp C------CEECEEECCSSSC--CCCBCCCEEEEECCCC--------
T ss_pred cCCC--ceEEEEEEEEECCc--ceeEEEEEEEEEEecCCCcchhhh
Confidence 9876 56999999999987 888999999999999999998654
No 8
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=100.00 E-value=7e-72 Score=646.38 Aligned_cols=477 Identities=23% Similarity=0.300 Sum_probs=404.4
Q ss_pred ccccceeeEeeeeccCCC---CcCcEEecC--CeEEEeeeccccccceeeee--ecCC---CCCceEEEEEEEEecCCCC
Q psy11097 31 SKYLMNCIVNESLKQNMT---SIPWIQITD--DAFIIVVNWVIEQLLDRDVI--NHEV---VHTDNQRVIIHVKDVNDES 100 (817)
Q Consensus 31 ~~~~~~~~v~~~~~~~~~---~~~~f~i~~--~~l~~~~~lD~E~~~~~~~~--~~~~---~~~~~~~v~I~V~DvNDn~ 100 (817)
.|.+.|+.+.|+|.+... ..++|.|++ |.|+++++||||+++.|.+. +.++ ..+.++.|+|.|.|+|||+
T Consensus 32 ~d~d~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~l~~~~~LDrE~~~~y~l~v~A~D~~~~~~~~~~~v~I~V~DvNDn~ 111 (546)
T 1l3w_A 32 SNKDRFNKVYYSITGQGADNPPQGVFRIEWETGWMLVTRPLDREEYDKYVLSSHAVSENGSPVEEPMEITINVIDQNDNR 111 (546)
T ss_dssp CSGGGSSCEEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEESSSCBCSCCEEEEEEEECCSCCC
T ss_pred cCCCCCceEEEEEECCCCCCCCCceEEEeCCccEEEECCcCCcccCceEEEEEEEEeCCCCcccceEEEEEEEEecccCc
Confidence 566688999999976432 356899996 59999999999999999765 4433 2467799999999999999
Q ss_pred CeeecCCCCeEEEEeccCCCCceEEEEEeecCCCC---c--cEEEEEEecC----CCCceEEEcceeEEEec-cCCCccc
Q psy11097 101 PYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDSD---H--NIHYFIVRDR----TGGRFEVDERSGVVRTR-GTDPFQL 170 (817)
Q Consensus 101 P~F~~~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g---~--~~~y~l~~~~----~~~~F~Id~~tG~i~~~-~~ld~e~ 170 (817)
|+|.+.. |.++|+|++++|+.|++|+|+|+|.| . .++|+|..+. ..++|+|++.||+|++. +.||||.
T Consensus 112 P~F~~~~--y~~~V~En~~~gt~v~~v~A~D~D~g~~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~ 189 (546)
T 1l3w_A 112 PKFTQDV--FRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIPNLFTINRETGVISLIGTGLDREK 189 (546)
T ss_dssp CEESSSC--EEEEEETTCCSSEEEEECCEECCSCCSSSSTTCCEEEEEEESSCCSCSCSEEECTTTCEEEECSCCCCTTT
T ss_pred CEecCce--eEEEEECCCCCCCEEEEEEEEcCCCCCCCCCCEEEEEEeCCCCCcccCCcEEEeCCCceEEEeccCCCccc
Confidence 9998764 78899999999999999999999998 3 3999998765 34799999999999985 7899999
Q ss_pred ccEEEEEEEEEecCCcccccccccCccEEEEEeCCCCCCeeeccceEEEecccccCCCCCCcceEEEEEEEEEeeCCCCC
Q psy11097 171 DQEYVLYVKAEDQNGRKDERKFQSTPEERLSIVGGKRAPQFYMPSYEAEIPENQKKDTEYPSMTGTATVRIYTKNKNDEE 250 (817)
Q Consensus 171 ~~~y~l~v~a~D~~g~~~~~~~~~~~~~~~~i~~~~~~p~f~~~~y~~~i~e~~~~d~~~p~~s~~~~v~I~V~DvNDn~ 250 (817)
...|.|+|+|+|+++ |+++++++|+|.|.|+|||+
T Consensus 190 ~~~y~l~V~A~D~g~---------------------------------------------~~~s~~~~v~I~V~DvNDn~ 224 (546)
T 1l3w_A 190 FPEYTLTVQATDLEG---------------------------------------------AGLSVEGKAIIQITDANDNA 224 (546)
T ss_dssp CCEEEEEEEEEHHHH---------------------------------------------TSCEEECCEEEEEECCCCCC
T ss_pred CceEEEEEEEEECCC---------------------------------------------CCcceEEEEEEEEeecCCCC
Confidence 999999999999764 35789999999999999999
Q ss_pred CcCcCceeeEEEeCCCCCCcEEEEEEEEeCC--CCCceeEEEeecccCCccEEEEEEeCCCCCCCeEEe--C--ceeEEE
Q psy11097 251 PKFSQQVYTPNVDENAGPNTLVTTVVASDKD--GDNVSIISVKAKSFADREIRYTLKAQGQGAGTFNIG--P--TSGIVK 324 (817)
Q Consensus 251 P~f~~~~y~~~V~En~~~gt~v~~v~A~D~D--~~~~~i~~~~~~~~~~~~i~y~l~~~g~~~~~F~Id--~--~tG~i~ 324 (817)
|.|.+..|.++|+|+ ++|+.|++|.|+|+| .+ .|+.++|+|.. +..+.|.|+ + .+|.|+
T Consensus 225 P~F~~~~y~~~V~En-~~gt~v~~v~A~D~D~~~g------------~n~~v~y~i~~--~~~~~F~I~~d~~~~~G~i~ 289 (546)
T 1l3w_A 225 PIFDPKTYTALVPEN-EIGFEVQRLSVTDLDMPGT------------PAWQAVYKIRV--NEGGFFNITTDPESNQGILT 289 (546)
T ss_dssp CCBSCSEEEEEEESS-SCCCEEEEECBCCCSCTTS------------TTSCEECCBSC--CTTSCEEEEECTTTCCEEEE
T ss_pred CccccccceEEEEeC-CCCCEEEEEEEEeCCCCCC------------CCcEEEEEEEe--CCCceEEEEecCCCCeEEEE
Confidence 999999999999999 999999999999999 44 36789999963 567899996 2 689999
Q ss_pred eCccCCccccCCCeEEEEEEEEEeCCC----CceEEEEEEEEEEeeCCCCCcccCCCcceEEeeCCCCCCcEEEEEEEEe
Q psy11097 325 LAKELDFEDLRQPHVYSLIVTATEDSG----GFSTSVELTIRVTDVNDNAPKFELPDYQAHNIDEDITTGTSILKVKATD 400 (817)
Q Consensus 325 ~~~~LD~E~~~~~~~y~l~V~a~d~~g----~~~~~~~v~I~V~DvNDn~P~f~~~~y~~~~V~E~~~~Gt~v~~v~A~D 400 (817)
+.++||||.. ..|.|+|+|+|.++ .++++++|+|+|.|+|| +|+|....|.. .|+|+.++|+.|++|.|+|
T Consensus 290 ~~~~LD~E~~---~~y~l~V~a~D~~~~~~~~~s~~~~v~I~V~DvND-~P~f~~~~y~~-~V~En~~~g~~v~~v~A~D 364 (546)
T 1l3w_A 290 TAKGLDFELR---KQYVLQITVENAEPFSVPLPTSTATVTVTVEDVNE-APFFVPAVSRV-DVSEDLSRGEKIISLVAQD 364 (546)
T ss_dssp ESSCCCCSSC---CCEEEEECCEESSCCSSCCCCCCEEEEEEEECCCC-CCEESSCEECC-CBCTTCCSSEEEEECCEEC
T ss_pred ECccCCcccc---cEEEEEEEEEECCCCCCCCcceeEEEEEEEEcCCC-CCcEecceEEE-EEeCCCCCCCEEEEEEEEC
Confidence 9999999984 68999999997542 37889999999999999 99999988986 7999999999999999999
Q ss_pred CCCCCCceEEEEEec---CceEEcc-ceeEEEeeecccCCCCcEEEEEEEEecCCceEEEEEEeCCCCCCccCCCcccee
Q psy11097 401 ADSGTNAEIEYHVSD---DNFAVDS-NGVINNHKTLDADNNNAYYEFVITAKDKDVDVELDVVDRNNKPPLWDNAIYGPI 476 (817)
Q Consensus 401 ~D~g~n~~i~y~i~~---~~F~I~~-~G~i~~~~~ld~e~~~~~~~l~V~a~D~g~~v~I~V~d~Nd~~P~f~~~~y~~i 476 (817)
+|.|.|+.++|+|.+ +.|.|++ +|.|++.++||||...
T Consensus 365 ~D~g~n~~i~ysi~~~~~~~F~Id~~tG~i~~~~~lD~E~~~-------------------------------------- 406 (546)
T 1l3w_A 365 PDKQQIQKLSYFIGNDPARWLTVNKDNGIVTGNGNLDRESEY-------------------------------------- 406 (546)
T ss_dssp CCTTCCCCEEEEECCCSSCCCEEETTTTEEEECSCCCTTSSS--------------------------------------
T ss_pred CCCCCCceEEEEECCCCCCcEEEeCCcEEEEECCccCCcccc--------------------------------------
Confidence 999999999999975 4577776 6777777777776530
Q ss_pred EeeccCCcCeEEEEEEEEEEeecCCcccccEEEEccccEEEEcccccccccccEEEEEEEEeCCccccCCCCCcceeeEE
Q psy11097 477 HIRENVTVSTVVTSVKARFGFVGGSTSSGQFVIEDITGVIRLNSKSISLDRDKYELNVTAVDDGACCANGDQSVHTATAV 556 (817)
Q Consensus 477 ~v~E~~~~g~~v~~v~a~~~~~~~~~~~~~F~Id~~tG~i~~~~~~~~ld~e~y~l~V~a~D~~~~~~~~~~~~~~~~~~ 556 (817)
.....|.|+|.|+|+|. ++++++++
T Consensus 407 ------------------------------------------------~~~~~y~l~V~a~D~g~-------p~~s~~~~ 431 (546)
T 1l3w_A 407 ------------------------------------------------VKNNTYTVIMLVTDDGV-------SVGTGTGT 431 (546)
T ss_dssp ------------------------------------------------CCSSCCEEEEEEEECSS-------SCCCCCEE
T ss_pred ------------------------------------------------CCCCEEEEEEEEEECCC-------CCcEeEEE
Confidence 01135788888888876 45788999
Q ss_pred EEEEEeecCCCCCccccCCCceeEEecCCCCCceEEEEEEecCCCCCCce-EEEEEEecCCCCCccEEEecccce--EEe
Q psy11097 557 VVVFITDVNDNKPVFRECSTYYPKVEEGAPNGSPVIKVHATDEDKGVNGQ-VKYSIVQQPNQKGAKFTVDEETGE--VVT 633 (817)
Q Consensus 557 v~I~V~DvNDn~P~f~~~~~~~~~v~En~~~gt~v~~v~A~D~D~g~n~~-v~y~l~~~~~~~~~~F~Id~~tG~--i~~ 633 (817)
|+|+|.|+|||+|+|.+ +...|.|+.+.|+ + +.|+|+|.|.|+. ++|+|..+. ...|.| ..+|. ...
T Consensus 432 v~I~V~DvNDn~P~f~~---~~~~v~e~~~~g~-v--v~A~D~D~~~n~~~~~y~l~~~~---~~~f~i-~~~g~~~~~~ 501 (546)
T 1l3w_A 432 LILHVLDVNDNGPVPSP---RVFTMCDQNPEPQ-V--LTISDADIPPNTYPYKVSLSHGS---DLTWKA-ELDSKGTSML 501 (546)
T ss_dssp EECCBCCCCCSCCCBSC---CCEEECSSSCCCE-E--EEBCCSSCTTTTCCCCCBCCSCS---SSSCBC-CBCTTSSEEE
T ss_pred EEEEEEECCCCcCCccC---ceEEEecCCCCCe-E--EEEEeCCCCCCCccEEEEECCCC---CCCEEE-eccCCceEEE
Confidence 99999999999999974 3678999999997 3 9999999999986 899997543 237888 44442 223
Q ss_pred cccccccCCCCcEEEEEEEEEeCCCCCceeEEEEEEEEEecCCCCCcc
Q psy11097 634 NKVFDREGDDGKFVSVTIKATDQGEPSLEGVCSFTVEITDVNDNPPLF 681 (817)
Q Consensus 634 ~~~lD~E~~~~~~~~l~V~a~D~g~p~~s~~~~v~I~V~DvNDn~P~f 681 (817)
.+.+|||.. ..|.|.|+|+|+|. ++++++|+|+|.|+|||++.|
T Consensus 502 ~~~~d~e~~--~~y~l~V~a~D~g~--~s~~~~v~I~V~d~NDn~~~C 545 (546)
T 1l3w_A 502 LSPTQQLKK--GDYSIYVLLSDAQN--NPQLTVVNATVCSCEGKAIKC 545 (546)
T ss_dssp EBCSSCCCS--SCBCCEEECCSSSC--CCEEEECCEEECSCSSSCCCC
T ss_pred ecccccccC--ceEEEEEEEEECCc--CceEEEEEEEEEeccCCCCCc
Confidence 346689987 45999999999986 899999999999999998865
No 9
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=100.00 E-value=2.2e-62 Score=549.55 Aligned_cols=372 Identities=68% Similarity=0.973 Sum_probs=331.1
Q ss_pred eeeeeeecccccceeeEeeeeccCCCCcCcEEecC----------CeEEEeeeccccccc---eeee--eecCC------
Q psy11097 23 RTRYKIMNSKYLMNCIVNESLKQNMTSIPWIQITD----------DAFIIVVNWVIEQLL---DRDV--INHEV------ 81 (817)
Q Consensus 23 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~f~i~~----------~~l~~~~~lD~E~~~---~~~~--~~~~~------ 81 (817)
..+++..|.|.|.|+.+.|++.... ...+|.|++ |.|+++++||||+++ .|.+ ++.+.
T Consensus 11 v~~v~AtD~D~g~n~~v~Ysi~~~~-~~~~F~I~~~~~~f~v~~tG~i~~~~~LD~E~~~~~~~~~~~V~a~d~g~~~~~ 89 (419)
T 3ubh_A 11 TKRIEFTEADGDTEGKSVFQLEKET-DKETFKIRDDNPWVTVETNGAVRVKKKWDYEELGPEKTIDFWVIITNMGHNAGI 89 (419)
T ss_dssp EEEEEEEGGGGCSTTCEEEECCCSS-TTCEEEESSCCSSEEECTTSEEEESSCCCGGGSCTTCEEEEEEEEEC--CCSSS
T ss_pred eEEEEEEcccCCCCceEEEEEecCC-CCceEEEcCCCccEEECCCcEEEECCccCccccCccceEEEEEEEEeCCCCCCC
Confidence 4678899999999999999997643 346788875 599999999999995 4543 34332
Q ss_pred CCCceEEEEEEEEecCCCCCeeecCCCCeEEEEeccCCCCceEEEEEeecCCCCccEEEEEEecCCCCceEEEcceeEEE
Q psy11097 82 VHTDNQRVIIHVKDVNDESPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDSDHNIHYFIVRDRTGGRFEVDERSGVVR 161 (817)
Q Consensus 82 ~~~~~~~v~I~V~DvNDn~P~F~~~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g~~~~y~l~~~~~~~~F~Id~~tG~i~ 161 (817)
+.++.++|+|+|+|+|||+|.|...++.|..+|+|++++|+.|++++|+|+|.|.|++|+|..+...+.|.|++.+|+|+
T Consensus 90 ~~~~~~~v~I~V~DvNDn~P~F~~~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g~n~~y~i~~~~~~~~F~I~~~tG~i~ 169 (419)
T 3ubh_A 90 KYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDTDHNIHYFIVRDRTGGRFEVDERSGVVR 169 (419)
T ss_dssp CCEEEEEEEEEEECCCCSCCEECCSSSSCEEEECTTCCTTCEEEECCEECSSTTCCEEEEEEEESSSSCEEECTTTCEEE
T ss_pred CCcceEEEEEEEEECCCCCCcccCCCCcEEEEEeCCCCCCCEEEEEEEECCCCCceeEEEEEeCCCCCeEEEeCCceEEE
Confidence 34567899999999999999999877667899999999999999999999999999999998877778999999999999
Q ss_pred eccCCCcccccEEEEEEEEEecCCcccccccccCccEEEEEeCCCCCCeeeccceEEEecccccCCCCCCcceEEEEEEE
Q psy11097 162 TRGTDPFQLDQEYVLYVKAEDQNGRKDERKFQSTPEERLSIVGGKRAPQFYMPSYEAEIPENQKKDTEYPSMTGTATVRI 241 (817)
Q Consensus 162 ~~~~ld~e~~~~y~l~v~a~D~~g~~~~~~~~~~~~~~~~i~~~~~~p~f~~~~y~~~i~e~~~~d~~~p~~s~~~~v~I 241 (817)
+++.+|+|..++|.|+|+|+|++|... .+++++++.++|
T Consensus 170 ~~~~ld~e~~~~y~l~V~A~D~g~~~~-----------------------------------------~~~~~~t~~v~I 208 (419)
T 3ubh_A 170 TRGTDLFQLDMEYVLYVKAEDQNGKVD-----------------------------------------DRRFQSTPEERL 208 (419)
T ss_dssp ECSSSCCCBTCEEEEEEEEEEEEEEC-------------------------------------------CCEEECCCEEE
T ss_pred EecccccccccEEEEEEEEEECCCCcc-----------------------------------------CcccccceEEEE
Confidence 999999999999999999999875311 124678888999
Q ss_pred EEeeCCCCCCcCcCceeeEEEeCCCCCCcEEEEEEEEeCCCCCceeEEEeecccCCccEEEEEEeCCCCCCCeEEeCcee
Q psy11097 242 YTKNKNDEEPKFSQQVYTPNVDENAGPNTLVTTVVASDKDGDNVSIISVKAKSFADREIRYTLKAQGQGAGTFNIGPTSG 321 (817)
Q Consensus 242 ~V~DvNDn~P~f~~~~y~~~V~En~~~gt~v~~v~A~D~D~~~~~i~~~~~~~~~~~~i~y~l~~~g~~~~~F~Id~~tG 321 (817)
.|.| |||+|.|.+..|.++|+||+++|+.|++|.|+|+|. +.++|+|...++..++|.|++.+|
T Consensus 209 ~V~d-ndn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~dn---------------~~i~Ysi~~~~~~~~~F~I~~~tG 272 (419)
T 3ubh_A 209 SIVG-GKRAPQFYMPSYEAEIPENQKKDSDIISIKAKSFAD---------------REIRYTLKAQGQGAGTFNIGPTSG 272 (419)
T ss_dssp EEEE-SCCCCEESSSCEEEEEETTCCTTCEEEECCEECSSC---------------CCCEEEEEESSSCCSSEEECTTTC
T ss_pred EEEC-CCCCCceecCeeEEEecCCCCCCcEEEEEEEecCCC---------------CceEEEEecCCCCCCcEEEECCCC
Confidence 9999 999999999999999999999999999999999973 468999986677789999999999
Q ss_pred EEEeCccCCccccCCCeEEEEEEEEEeCCCCceEEEEEEEEEEeeCCCCCcccCCCcceEEeeCCCCCCcEEEEEEEEeC
Q psy11097 322 IVKLAKELDFEDLRQPHVYSLIVTATEDSGGFSTSVELTIRVTDVNDNAPKFELPDYQAHNIDEDITTGTSILKVKATDA 401 (817)
Q Consensus 322 ~i~~~~~LD~E~~~~~~~y~l~V~a~d~~g~~~~~~~v~I~V~DvNDn~P~f~~~~y~~~~V~E~~~~Gt~v~~v~A~D~ 401 (817)
.|++.++||||...+...|.|+|.|+|++|++++++.|+|+|+|+|||+|.|..+.|....|.|+.++|+.|++|.|+|+
T Consensus 273 ~i~~~~~LD~E~~~~~~~y~l~V~a~dd~~~~s~~~~v~I~V~DvNDn~P~f~~~~~~~~~v~E~~~~gt~v~~v~A~D~ 352 (419)
T 3ubh_A 273 IVKLAKELDFEDLRQPHVYSLIVTATEDSGGFSTSVDLTIRVTDVNDNAPKFELPDYQAHNVDEDIPLGTSILRVKAMDS 352 (419)
T ss_dssp EEEECSCCCTTCTTSCSEEEEEEEEECTTTSCEEEEEEEEEEECCCCCCCEESSSEEEEEEEETTCCTTCEEEECCEECS
T ss_pred EEEECcccCccccccccEEEEEEEEEeCCCCcEEEEEEEEEEEccCCCCCcccCCcceeEEecCCCCCCCEEEEEEEEeC
Confidence 99999999999864345899999999777889999999999999999999999988875469999999999999999999
Q ss_pred CCCCCceEEEEEecCceEEccceeEEEeeecccCCCCcEEEEEEEEecCCc
Q psy11097 402 DSGTNAEIEYHVSDDNFAVDSNGVINNHKTLDADNNNAYYEFVITAKDKDV 452 (817)
Q Consensus 402 D~g~n~~i~y~i~~~~F~I~~~G~i~~~~~ld~e~~~~~~~l~V~a~D~g~ 452 (817)
|.|.|++++|+|.++.|.|+++|.|+++++||+|.....|.|+|.|+|+|.
T Consensus 353 D~g~n~~v~Y~i~~~~F~Id~~G~i~~~~~ld~E~~~~~y~l~V~a~D~G~ 403 (419)
T 3ubh_A 353 DSGSNAEIEYLVSDDHFAVDSNGIIVNNKQLDADNNNAYYEFIVTAKDKGE 403 (419)
T ss_dssp SCGGGGCEEEEESCTTEEECTTCEEEECSCSSSSCTTCEEEEEEEEEECCS
T ss_pred CCCCCCEEEEEEcCCcEEECCCeEEEECcccCcccCCceEEEEEEEEECCc
Confidence 999999999999999999999999999999999985568999999999987
No 10
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=100.00 E-value=8.5e-62 Score=544.73 Aligned_cols=389 Identities=26% Similarity=0.411 Sum_probs=324.0
Q ss_pred cEEEEEEEEeCCCCCceeEEEeecccCCccEEEEEEeCCCCCCCeEEeC--------ceeEEEeCccCCccccCCCeEEE
Q psy11097 270 TLVTTVVASDKDGDNVSIISVKAKSFADREIRYTLKAQGQGAGTFNIGP--------TSGIVKLAKELDFEDLRQPHVYS 341 (817)
Q Consensus 270 t~v~~v~A~D~D~~~~~i~~~~~~~~~~~~i~y~l~~~g~~~~~F~Id~--------~tG~i~~~~~LD~E~~~~~~~y~ 341 (817)
..+.+|+|+|+|.+ .|+.++|+|. .+.....|.|++ .+|.|+++++||||..+....|.
T Consensus 9 ~Pv~~v~AtD~D~g------------~n~~v~Ysi~-~~~~~~~F~I~~~~~~f~v~~tG~i~~~~~LD~E~~~~~~~~~ 75 (419)
T 3ubh_A 9 RPTKRIEFTEADGD------------TEGKSVFQLE-KETDKETFKIRDDNPWVTVETNGAVRVKKKWDYEELGPEKTID 75 (419)
T ss_dssp EEEEEEEEEGGGGC------------STTCEEEECC-CSSTTCEEEESSCCSSEEECTTSEEEESSCCCGGGSCTTCEEE
T ss_pred cceEEEEEEcccCC------------CCceEEEEEe-cCCCCceEEEcCCCccEEECCCcEEEECCccCccccCccceEE
Confidence 56899999999987 4688999996 345567788886 79999999999999865446899
Q ss_pred EEEEEEeCCC----CceEEEEEEEEEEeeCCCCCcccCCC--cceEEeeCCCCCCcEEEEEEEEeCCCCCCceEEEEEec
Q psy11097 342 LIVTATEDSG----GFSTSVELTIRVTDVNDNAPKFELPD--YQAHNIDEDITTGTSILKVKATDADSGTNAEIEYHVSD 415 (817)
Q Consensus 342 l~V~a~d~~g----~~~~~~~v~I~V~DvNDn~P~f~~~~--y~~~~V~E~~~~Gt~v~~v~A~D~D~g~n~~i~y~i~~ 415 (817)
+.|.|+|.+. ++++.+.|+|+|+|+|||+|.|.... |.. .|+|++++|+.|+++.|+|+|.|.| ++|+|..
T Consensus 76 ~~V~a~d~g~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~~~~~~-~v~E~~~~gt~v~~v~A~D~D~g~n--~~y~i~~ 152 (419)
T 3ubh_A 76 FWVIITNMGHNAGIKYTDNQRVIILVKDVNDEPPYFINRPLPMQA-VVQLNAPPNTPVFTLQARDPDTDHN--IHYFIVR 152 (419)
T ss_dssp EEEEEEC--CCSSSCCEEEEEEEEEEECCCCSCCEECCSSSSCEE-EECTTCCTTCEEEECCEECSSTTCC--EEEEEEE
T ss_pred EEEEEEeCCCCCCCCCcceEEEEEEEEECCCCCCcccCCCCcEEE-EEeCCCCCCCEEEEEEEECCCCCce--eEEEEEe
Confidence 9999996321 46788999999999999999999877 555 7999999999999999999999877 7888753
Q ss_pred CceEEccceeEEEeeecccCCCCcEEEEEEEEecCCceEEEEEEeCCCCCCccCCCccceeEeeccCCcCeEEEEEEEEE
Q psy11097 416 DNFAVDSNGVINNHKTLDADNNNAYYEFVITAKDKDVDVELDVVDRNNKPPLWDNAIYGPIHIRENVTVSTVVTSVKARF 495 (817)
Q Consensus 416 ~~F~I~~~G~i~~~~~ld~e~~~~~~~l~V~a~D~g~~v~I~V~d~Nd~~P~f~~~~y~~i~v~E~~~~g~~v~~v~a~~ 495 (817)
+
T Consensus 153 ~------------------------------------------------------------------------------- 153 (419)
T 3ubh_A 153 D------------------------------------------------------------------------------- 153 (419)
T ss_dssp E-------------------------------------------------------------------------------
T ss_pred C-------------------------------------------------------------------------------
Confidence 1
Q ss_pred EeecCCcccccEEEEccccEEEEcccccccccc---cEEEEEEEEeCCccccCCCCCcceeeEEEEEEEeecCCCCCccc
Q psy11097 496 GFVGGSTSSGQFVIEDITGVIRLNSKSISLDRD---KYELNVTAVDDGACCANGDQSVHTATAVVVVFITDVNDNKPVFR 572 (817)
Q Consensus 496 ~~~~~~~~~~~F~Id~~tG~i~~~~~~~~ld~e---~y~l~V~a~D~~~~~~~~~~~~~~~~~~v~I~V~DvNDn~P~f~ 572 (817)
+..+.|.|++.+|.|++.+ .+|+| .|.|+|+|+|++++. ..+++++++.++|.|.| |||+|.|.
T Consensus 154 ------~~~~~F~I~~~tG~i~~~~---~ld~e~~~~y~l~V~A~D~g~~~---~~~~~~~t~~v~I~V~d-ndn~P~F~ 220 (419)
T 3ubh_A 154 ------RTGGRFEVDERSGVVRTRG---TDLFQLDMEYVLYVKAEDQNGKV---DDRRFQSTPEERLSIVG-GKRAPQFY 220 (419)
T ss_dssp ------SSSSCEEECTTTCEEEECS---SSCCCBTCEEEEEEEEEEEEEEC-----CCEEECCCEEEEEEE-SCCCCEES
T ss_pred ------CCCCeEEEeCCceEEEEec---ccccccccEEEEEEEEEECCCCc---cCcccccceEEEEEEEC-CCCCCcee
Confidence 1223455555555555543 23332 477778888876521 11246778889999999 99999999
Q ss_pred cCCCceeEEecCCCCCceEEEEEEecCCCCCCceEEEEEEecCCCCCccEEEecccceEEecccccccCCC-CcEEEEEE
Q psy11097 573 ECSTYYPKVEEGAPNGSPVIKVHATDEDKGVNGQVKYSIVQQPNQKGAKFTVDEETGEVVTNKVFDREGDD-GKFVSVTI 651 (817)
Q Consensus 573 ~~~~~~~~v~En~~~gt~v~~v~A~D~D~g~n~~v~y~l~~~~~~~~~~F~Id~~tG~i~~~~~lD~E~~~-~~~~~l~V 651 (817)
+ ..|.+.|+||.++|+.|++|.|+|+| |+.++|+|.... ...++|.|++.+|.|++.++||||... ...|.|+|
T Consensus 221 ~-~~y~~~v~En~~~gt~v~~v~A~D~d---n~~i~Ysi~~~~-~~~~~F~I~~~tG~i~~~~~LD~E~~~~~~~y~l~V 295 (419)
T 3ubh_A 221 M-PSYEAEIPENQKKDSDIISIKAKSFA---DREIRYTLKAQG-QGAGTFNIGPTSGIVKLAKELDFEDLRQPHVYSLIV 295 (419)
T ss_dssp S-SCEEEEEETTCCTTCEEEECCEECSS---CCCCEEEEEESS-SCCSSEEECTTTCEEEECSCCCTTCTTSCSEEEEEE
T ss_pred c-CeeEEEecCCCCCCcEEEEEEEecCC---CCceEEEEecCC-CCCCcEEEECCCCEEEECcccCccccccccEEEEEE
Confidence 7 78999999999999999999999987 678999998532 234699999999999999999999863 23699999
Q ss_pred EEEeCCCCCceeEEEEEEEEEecCCCCCccCCCceEE-EEeCCCCCCcEEEEEEEEeCCCCCCceEEEEEecCcCCCCCc
Q psy11097 652 KATDQGEPSLEGVCSFTVEITDVNDNPPLFDRQKYVE-NVKQDASIGTNILRVSASDEDADNNGAIVYTLSAPYNQMDLE 730 (817)
Q Consensus 652 ~a~D~g~p~~s~~~~v~I~V~DvNDn~P~f~~~~y~~-~v~E~~~~g~~v~~v~A~D~D~g~n~~i~Y~l~~~~~~~~~~ 730 (817)
+|+|.+ ++++++++|+|+|+|+|||+|+|..+.|.. .|+|++++|+.|++|+|+|+|.|.|+.++|+|..
T Consensus 296 ~a~dd~-~~~s~~~~v~I~V~DvNDn~P~f~~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g~n~~v~Y~i~~-------- 366 (419)
T 3ubh_A 296 TATEDS-GGFSTSVDLTIRVTDVNDNAPKFELPDYQAHNVDEDIPLGTSILRVKAMDSDSGSNAEIEYLVSD-------- 366 (419)
T ss_dssp EEECTT-TSCEEEEEEEEEEECCCCCCCEESSSEEEEEEEETTCCTTCEEEECCEECSSCGGGGCEEEEESC--------
T ss_pred EEEeCC-CCcEEEEEEEEEEEccCCCCCcccCCcceeEEecCCCCCCCEEEEEEEEeCCCCCCCEEEEEEcC--------
Confidence 999754 468899999999999999999999999987 7999999999999999999999999999999853
Q ss_pred ceEEeCCeeEEEEeeeceEEEEEeeCCCCCCcccEEEeCceeEEEEcccCCccc-ccEEEEEEEEEeCCCCCCCCCCCCC
Q psy11097 731 YFEIQPESGWIVLKKPLDVYYYIVDSPRNEGKDFFEINLQSGEVFTKVVFDREK-QGAYALEVEARDGAPSARPNSDGEP 809 (817)
Q Consensus 731 ~F~Id~~tG~i~~~~~ld~~y~~~~~~~~~~~~~F~Id~~tG~l~~~~~LDrE~-~~~y~l~V~a~D~g~p~~~~~~~~~ 809 (817)
++|.|++ +|+|++.+.||||. ...|.|+|+|+|+|.|+++++.+++
T Consensus 367 --------------------------------~~F~Id~-~G~i~~~~~ld~E~~~~~y~l~V~a~D~G~p~~sst~~v~ 413 (419)
T 3ubh_A 367 --------------------------------DHFAVDS-NGIIVNNKQLDADNNNAYYEFIVTAKDKGEPPKSGVATVR 413 (419)
T ss_dssp --------------------------------TTEEECT-TCEEEECSCSSSSCTTCEEEEEEEEEECCSSCCEEEEEEE
T ss_pred --------------------------------CcEEECC-CeEEEECcccCcccCCceEEEEEEEEECCcCCceeEEEEE
Confidence 3688887 89999999999999 6899999999999999999998888
Q ss_pred Cccc
Q psy11097 810 NSAC 813 (817)
Q Consensus 810 v~v~ 813 (817)
|.|.
T Consensus 414 I~v~ 417 (419)
T 3ubh_A 414 VYTK 417 (419)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 7763
No 11
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=100.00 E-value=4.9e-49 Score=423.97 Aligned_cols=283 Identities=34% Similarity=0.483 Sum_probs=238.7
Q ss_pred EeeCC--CCCCcEEEEEEEEeCCCCCCceEEEEEecCceEEccceeEEEeeecccCCCCcEEEEEEEEecCCceEEEEEE
Q psy11097 382 NIDED--ITTGTSILKVKATDADSGTNAEIEYHVSDDNFAVDSNGVINNHKTLDADNNNAYYEFVITAKDKDVDVELDVV 459 (817)
Q Consensus 382 ~V~E~--~~~Gt~v~~v~A~D~D~g~n~~i~y~i~~~~F~I~~~G~i~~~~~ld~e~~~~~~~l~V~a~D~g~~v~I~V~ 459 (817)
.|.|+ .+.|+.|+++. +|+|.| ++.++|+|.++
T Consensus 8 ~v~E~~~~~~~~~v~~va-~D~D~g-~~~i~Y~l~~~------------------------------------------- 42 (322)
T 2a62_A 8 FVLEEFSGPEPILVGRLH-TDLDPG-SKKIKYILSGD------------------------------------------- 42 (322)
T ss_dssp ECCCSCCCSSCEECCCCC-CCCCCS-SCCCEEEEEET-------------------------------------------
T ss_pred eeccccCCCCCEEEEEEE-EcCCCC-CCEEEEEEECC-------------------------------------------
Confidence 79999 88999999985 899998 78899998642
Q ss_pred eCCCCCCccCCCccceeEeeccCCcCeEEEEEEEEEEeecCCcccccEEEEccccEEEEcccccccccc---cEEEEEEE
Q psy11097 460 DRNNKPPLWDNAIYGPIHIRENVTVSTVVTSVKARFGFVGGSTSSGQFVIEDITGVIRLNSKSISLDRD---KYELNVTA 536 (817)
Q Consensus 460 d~Nd~~P~f~~~~y~~i~v~E~~~~g~~v~~v~a~~~~~~~~~~~~~F~Id~~tG~i~~~~~~~~ld~e---~y~l~V~a 536 (817)
...+.|.|++.+|.|++.+ .|||| .|.|+|+|
T Consensus 43 ------------------------------------------~~~~~F~Id~~tG~i~~~~---~LDrE~~~~y~l~v~a 77 (322)
T 2a62_A 43 ------------------------------------------GAGTIFQINDITGDIHAIK---RLDREEKAEYTLTAQA 77 (322)
T ss_dssp ------------------------------------------TBTTTEEEETTTTEEEECS---CCCTTTCSBCCEEEEE
T ss_pred ------------------------------------------CCCCcEEEeCCcCEEEEec---cCCcccccEEEEEEEE
Confidence 1123455555555555544 33333 57777888
Q ss_pred EeCCccccCCCCCcceeeEEEEEEEeecCCCCCccccCCCceeEEecCCCCCceEEEEEEecCCC---CCCceEEEEEEe
Q psy11097 537 VDDGACCANGDQSVHTATAVVVVFITDVNDNKPVFRECSTYYPKVEEGAPNGSPVIKVHATDEDK---GVNGQVKYSIVQ 613 (817)
Q Consensus 537 ~D~~~~~~~~~~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~~v~En~~~gt~v~~v~A~D~D~---g~n~~v~y~l~~ 613 (817)
+|++.. +++++++.|.|+|.|+|||+|.|.+ ..|.+.|+|+.++|+.|+++.|+|+|. |.|+.++|+|.+
T Consensus 78 ~D~~~~------~~~~~~~~v~I~V~DvNDn~P~F~~-~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~G~n~~i~Y~i~~ 150 (322)
T 2a62_A 78 VDFETN------KPLEPPSEFIIKVQDINDNAPEFLN-GPYHATVPEMSILGTSVTNVTATDADDPVYGNSAKLVYSILE 150 (322)
T ss_dssp ECTTTC------SEEEEEEEECEECCCCSCSCBCCSS-SEEEEEECSSCCTTCBCCCCCCCBCSCSSSTTSSCEEEEEEE
T ss_pred EECCCC------CcccceEEEEEEEEecCCCCCccCC-CceEEEEeCCCCCCCEEEEEEEEeCCCCCCCccEEEEEEEcc
Confidence 886541 3467788999999999999999997 789999999999999999999999996 889999999987
Q ss_pred cCCCCCccEEEecccceEEec-ccccccCCCCcEEEEEEEEEeCCCCC--ceeEEEEEEEEEecCCCCCccCCCceEEEE
Q psy11097 614 QPNQKGAKFTVDEETGEVVTN-KVFDREGDDGKFVSVTIKATDQGEPS--LEGVCSFTVEITDVNDNPPLFDRQKYVENV 690 (817)
Q Consensus 614 ~~~~~~~~F~Id~~tG~i~~~-~~lD~E~~~~~~~~l~V~a~D~g~p~--~s~~~~v~I~V~DvNDn~P~f~~~~y~~~v 690 (817)
+. .+|.|++.+|.|++. +.||||.. ..|.|+|+|+|+|.|+ ++++++|+|+|.|+|||+|+|.+..|.+.|
T Consensus 151 ~~----~~F~Id~~tG~i~~~~~~LD~E~~--~~y~l~V~a~D~g~p~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~v 224 (322)
T 2a62_A 151 GQ----PYFSIEPETAIIKTALPNMDREAK--EEYLVVIQAKDMGGHSGGLSGTTTLTVTLTDVNDNPPKFAQSLYHFSV 224 (322)
T ss_dssp CT----TTEEECTTTCCEEECSSCCCGGGC--SEEEEEEEEEESCSSSSCCBCCEEEEEEECCCCCCCCCCSCSEEEEEE
T ss_pred CC----CCEEEecCCCEEEecccCCCcccC--CeEEEEEEEEECCCCCCCceeEEEEEEEEEecCCCCCeecCCCceeEe
Confidence 53 389999999999998 89999987 5699999999999874 899999999999999999999999999999
Q ss_pred eCCCCCCcEEEEEEEEeCCCCCCceEEEEEecCcCCCCCcceEEeCCeeEEEEeeeceEEEEEeeCCCCCCcccEEEe--
Q psy11097 691 KQDASIGTNILRVSASDEDADNNGAIVYTLSAPYNQMDLEYFEIQPESGWIVLKKPLDVYYYIVDSPRNEGKDFFEIN-- 768 (817)
Q Consensus 691 ~E~~~~g~~v~~v~A~D~D~g~n~~i~Y~l~~~~~~~~~~~F~Id~~tG~i~~~~~ld~~y~~~~~~~~~~~~~F~Id-- 768 (817)
+|++++|+.|++|.|+|+|.|.|+.++|+|..+ +..++|.|+
T Consensus 225 ~En~~~gt~v~~v~A~D~D~g~n~~i~Y~i~~g------------------------------------~~~~~F~I~~d 268 (322)
T 2a62_A 225 PEDVVLGTAIGRVKANDQDIGENAQSSYDIIDG------------------------------------DGTALFEITSD 268 (322)
T ss_dssp CSCCSSCCEEEEEECCCSSCGGGTCCEEEEC---------------------------------------CCSSBCCBCC
T ss_pred ECCCCCCcEEEEEEEEeCCCCCCceEEEEEECC------------------------------------CCCCcEEEecc
Confidence 999999999999999999999999999999763 123467776
Q ss_pred --CceeEEEEcccCCcccccEEEEEEEEEeCCCCCCC
Q psy11097 769 --LQSGEVFTKVVFDREKQGAYALEVEARDGAPSARP 803 (817)
Q Consensus 769 --~~tG~l~~~~~LDrE~~~~y~l~V~a~D~g~p~~~ 803 (817)
+.+|.|+++++||||++..|.|+|+|+|+|.|++.
T Consensus 269 ~~~~tG~i~~~~~LD~E~~~~y~l~V~A~D~g~pp~~ 305 (322)
T 2a62_A 269 AQAQDGVIRLRKPLDFETKKSYTLKVEAANIHIDPRF 305 (322)
T ss_dssp TTTSEEEEEBCSCCCCSSCCEEEEEEEEECCCSSCTT
T ss_pred CCCceEEEEECCcCCcccCCeEEEEEEEEECCCCCcc
Confidence 46899999999999999999999999999887654
No 12
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=100.00 E-value=8.8e-48 Score=415.01 Aligned_cols=291 Identities=65% Similarity=0.930 Sum_probs=246.7
Q ss_pred eeeeeeecccccceeeEeeeeccCCC--------CcCcEEecC-CeEEEeeeccccccc-----eeeee--ecCC----C
Q psy11097 23 RTRYKIMNSKYLMNCIVNESLKQNMT--------SIPWIQITD-DAFIIVVNWVIEQLL-----DRDVI--NHEV----V 82 (817)
Q Consensus 23 ~~~~~~~~~~~~~~~~v~~~~~~~~~--------~~~~f~i~~-~~l~~~~~lD~E~~~-----~~~~~--~~~~----~ 82 (817)
..+|+..|+|.|.|+.+.|++..... +..||.|++ |.|+++++||||+++ .|.+. +.++ +
T Consensus 6 ~~~~~atd~D~g~ng~v~y~l~~~~~~~~f~i~~~~~~F~i~~tG~l~~~~~LD~E~~~~~~~~~~~l~v~a~d~~~~~~ 85 (316)
T 3ubf_A 6 TKRIEFTEADGDTEGKSVFQLEKETDKETFKIRDDNPWVTVETNGAVRVKKKWDYEELGPEKTIDFWVIITNMGHNAGIK 85 (316)
T ss_dssp EEEEEEESGGGCSTTCEEEECCCSSTTCEEEESSCCSSEEECTTSEEEESSCCCGGGSCTTCEEEEEEEEEC-------C
T ss_pred eEEEEEEecCCCCCceEEEEEEcCCCcceEEEeCCCCeEEECCCeEEEECCccChhhcccccceEEEEEEEEcCCCCCCc
Confidence 46799999999999999998866432 224677765 599999999999964 34444 3333 3
Q ss_pred CCceEEEEEEEEecCCCCCeeecCCCCeEEEEeccCCCCceEEEEEeecCCCCccEEEEEEecCCCCceEEEcceeEEEe
Q psy11097 83 HTDNQRVIIHVKDVNDESPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDSDHNIHYFIVRDRTGGRFEVDERSGVVRT 162 (817)
Q Consensus 83 ~~~~~~v~I~V~DvNDn~P~F~~~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g~~~~y~l~~~~~~~~F~Id~~tG~i~~ 162 (817)
++.+++|+|.|.|+|||+|.|...++.|.+.|+|++++|+.|++++|+|+|.|.|++|+|..++..++|.|++.+|+|++
T Consensus 86 ~s~~~~v~I~V~DvNDn~P~F~~~~~~y~~~v~En~~~gt~v~~v~A~D~D~g~ni~Y~i~~~~~~~~F~Id~~tG~i~~ 165 (316)
T 3ubf_A 86 YTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDTDHNIHYFIVRDRTGGRFEVDERSGVVRT 165 (316)
T ss_dssp CCEEEEEEEEEECTTCCCCEECCSSSSEEEEECTTCCTTCEEEECCEECSSTTCCEEEEEEEEESSSCEEECTTTCEEEE
T ss_pred ccceEEEEEEEEECCCCCCccCCCCCCEEEEEeCCCCCCCEEEEEEEECCCCCCceEEEEEeCCCCCEEEEECCccEEEE
Confidence 47889999999999999999998766688999999999999999999999999999999987777789999999999999
Q ss_pred ccCCCcccccEEEEEEEEEecCCcccccccccCccEEEEEeCCCCCCeeeccceEEEecccccCCCCCCcceEEEEEEEE
Q psy11097 163 RGTDPFQLDQEYVLYVKAEDQNGRKDERKFQSTPEERLSIVGGKRAPQFYMPSYEAEIPENQKKDTEYPSMTGTATVRIY 242 (817)
Q Consensus 163 ~~~ld~e~~~~y~l~v~a~D~~g~~~~~~~~~~~~~~~~i~~~~~~p~f~~~~y~~~i~e~~~~d~~~p~~s~~~~v~I~ 242 (817)
+++||||..++|.|+|+|+|++|.. ..|++++++.|+|.
T Consensus 166 ~~~lD~e~~~~y~l~V~A~D~g~~~-----------------------------------------~~~~~~~~~~v~I~ 204 (316)
T 3ubf_A 166 RGTDLFQLDMEYVLYVKAEDQNGKV-----------------------------------------DDRRFQSTPEERLS 204 (316)
T ss_dssp CSSCCCCTTCEEEEEEEEEESCC------------------------------------------------CBCCCEEEE
T ss_pred CCcCCcccCcEEEEEEEEEeCCCCC-----------------------------------------CCccccceEEEEEE
Confidence 9999999999999999999987641 12456788899999
Q ss_pred EeeCCCCCCcCcCceeeEEEeCCCCCCcEEEEEEEEeCCCCCceeEEEeecccCCccEEEEEEeCCCCCCCeEEeCceeE
Q psy11097 243 TKNKNDEEPKFSQQVYTPNVDENAGPNTLVTTVVASDKDGDNVSIISVKAKSFADREIRYTLKAQGQGAGTFNIGPTSGI 322 (817)
Q Consensus 243 V~DvNDn~P~f~~~~y~~~V~En~~~gt~v~~v~A~D~D~~~~~i~~~~~~~~~~~~i~y~l~~~g~~~~~F~Id~~tG~ 322 (817)
|.| |||+|.|.+..|.++|+||+++|+.|++|.|+|+|. +.++|+|...++..++|.|++.+|.
T Consensus 205 V~d-nDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~Dn---------------~~i~Y~i~~~~~~~~~F~Id~~tG~ 268 (316)
T 3ubf_A 205 IVG-GKRAPQFYMPSYEAEIPENQKKDSDIISIKAKSFAD---------------REIRYTLKAQGQGAGTFNIGPTSGI 268 (316)
T ss_dssp EEE-SCCCCEESSSSEEEEEETTCCTTCEEEECCEECTTC---------------CCEEEEEEEESSCTTTEEECTTTCE
T ss_pred EEc-CCCCCEEcCCCceEEEeCCCCCCCEEEEEEEEeCCC---------------CEEEEEEEcCCCCCCeEEEECCeEE
Confidence 999 999999999999999999999999999999999983 4689999755777899999999999
Q ss_pred EEeCccCCccccCCCeEEEEEEEEEeCCCCceEEEEEEEEEEeeCCCC
Q psy11097 323 VKLAKELDFEDLRQPHVYSLIVTATEDSGGFSTSVELTIRVTDVNDNA 370 (817)
Q Consensus 323 i~~~~~LD~E~~~~~~~y~l~V~a~d~~g~~~~~~~v~I~V~DvNDn~ 370 (817)
|++.++||||...+...|.|+|+|+|++|++++++.|+|+|+|+||||
T Consensus 269 i~~~~~LD~E~~~~~~~y~l~V~A~dd~g~~~~~~~v~I~V~DvNDn~ 316 (316)
T 3ubf_A 269 VKLAKELDFEDLRQPHVYSLIVTATEDSGGFSTSVDLTIRVTDVNDNA 316 (316)
T ss_dssp EEECSCCCSSCTTSCSEEEEEEEEEESSSSCEEEEEEEEEEECC----
T ss_pred EEECCcCCccccCCCceEEEEEEEEECCCCCEEEEEEEEEEEecCCCC
Confidence 999999999985323689999999977888999999999999999986
No 13
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=100.00 E-value=3.2e-47 Score=409.82 Aligned_cols=279 Identities=30% Similarity=0.448 Sum_probs=248.1
Q ss_pred EEEEecc--CCCCceEEEEEeecCCCCc-cEEEEEEecCCCCceEEEcceeEEEeccCCCcccccEEEEEEEEEecCCcc
Q psy11097 111 QAVVQLN--APPNTPVFTLQARDPDSDH-NIHYFIVRDRTGGRFEVDERSGVVRTRGTDPFQLDQEYVLYVKAEDQNGRK 187 (817)
Q Consensus 111 ~~~v~E~--~~~gt~v~~v~A~D~D~g~-~~~y~l~~~~~~~~F~Id~~tG~i~~~~~ld~e~~~~y~l~v~a~D~~g~~ 187 (817)
+.+|.|+ .+.|+.|+++. +|+|.|. .++|+|.+++..++|.|++.+|+|++++.||||....|.|+|+|+|+++.
T Consensus 6 ~~~v~E~~~~~~~~~v~~va-~D~D~g~~~i~Y~l~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~~~- 83 (322)
T 2a62_A 6 QMFVLEEFSGPEPILVGRLH-TDLDPGSKKIKYILSGDGAGTIFQINDITGDIHAIKRLDREEKAEYTLTAQAVDFETN- 83 (322)
T ss_dssp CEECCCSCCCSSCEECCCCC-CCCCCSSCCCEEEEEETTBTTTEEEETTTTEEEECSCCCTTTCSBCCEEEEEECTTTC-
T ss_pred eeeeccccCCCCCEEEEEEE-EcCCCCCCEEEEEEECCCCCCcEEEeCCcCEEEEeccCCcccccEEEEEEEEEECCCC-
Confidence 4568999 89999999985 8999873 49999987766679999999999999999999999999999999997541
Q ss_pred cccccccCccEEEEEeCCCCCCeeeccceEEEecccccCCCCCCcceEEEEEEEEEeeCCCCCCcCcCceeeEEEeCCCC
Q psy11097 188 DERKFQSTPEERLSIVGGKRAPQFYMPSYEAEIPENQKKDTEYPSMTGTATVRIYTKNKNDEEPKFSQQVYTPNVDENAG 267 (817)
Q Consensus 188 ~~~~~~~~~~~~~~i~~~~~~p~f~~~~y~~~i~e~~~~d~~~p~~s~~~~v~I~V~DvNDn~P~f~~~~y~~~V~En~~ 267 (817)
+++++++.|+|.|.|+|||+|.|.+..|.++|+|+++
T Consensus 84 -------------------------------------------~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~ 120 (322)
T 2a62_A 84 -------------------------------------------KPLEPPSEFIIKVQDINDNAPEFLNGPYHATVPEMSI 120 (322)
T ss_dssp -------------------------------------------SEEEEEEEECEECCCCSCSCBCCSSSEEEEEECSSCC
T ss_pred -------------------------------------------CcccceEEEEEEEEecCCCCCccCCCceEEEEeCCCC
Confidence 2467888999999999999999999999999999999
Q ss_pred CCcEEEEEEEEeCCCCCceeEEEeecccCCccEEEEEEeCCCCCCCeEEeCceeEEEeC-ccCCccccCCCeEEEEEEEE
Q psy11097 268 PNTLVTTVVASDKDGDNVSIISVKAKSFADREIRYTLKAQGQGAGTFNIGPTSGIVKLA-KELDFEDLRQPHVYSLIVTA 346 (817)
Q Consensus 268 ~gt~v~~v~A~D~D~~~~~i~~~~~~~~~~~~i~y~l~~~g~~~~~F~Id~~tG~i~~~-~~LD~E~~~~~~~y~l~V~a 346 (817)
+|+.|+++.|+|+|.+..+ .|+.++|+|.. + ...|.|++.+|.|++. ++||||.. ..|.|.|+|
T Consensus 121 ~gt~v~~v~A~D~D~~~~G---------~n~~i~Y~i~~-~--~~~F~Id~~tG~i~~~~~~LD~E~~---~~y~l~V~a 185 (322)
T 2a62_A 121 LGTSVTNVTATDADDPVYG---------NSAKLVYSILE-G--QPYFSIEPETAIIKTALPNMDREAK---EEYLVVIQA 185 (322)
T ss_dssp TTCBCCCCCCCBCSCSSST---------TSSCEEEEEEE-C--TTTEEECTTTCCEEECSSCCCGGGC---SEEEEEEEE
T ss_pred CCCEEEEEEEEeCCCCCCC---------ccEEEEEEEcc-C--CCCEEEecCCCEEEecccCCCcccC---CeEEEEEEE
Confidence 9999999999999963111 36789999974 2 4689999999999998 99999984 789999999
Q ss_pred EeCCC---CceEEEEEEEEEEeeCCCCCcccCCCcceEEeeCCCCCCcEEEEEEEEeCCCCCCceEEEEEec----CceE
Q psy11097 347 TEDSG---GFSTSVELTIRVTDVNDNAPKFELPDYQAHNIDEDITTGTSILKVKATDADSGTNAEIEYHVSD----DNFA 419 (817)
Q Consensus 347 ~d~~g---~~~~~~~v~I~V~DvNDn~P~f~~~~y~~~~V~E~~~~Gt~v~~v~A~D~D~g~n~~i~y~i~~----~~F~ 419 (817)
+|.++ ++++++.|+|+|.|+|||+|+|.+..|.. .|+|+.++|+.|++|.|+|+|.|.|+.++|+|.+ +.|.
T Consensus 186 ~D~g~p~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~-~v~En~~~gt~v~~v~A~D~D~g~n~~i~Y~i~~g~~~~~F~ 264 (322)
T 2a62_A 186 KDMGGHSGGLSGTTTLTVTLTDVNDNPPKFAQSLYHF-SVPEDVVLGTAIGRVKANDQDIGENAQSSYDIIDGDGTALFE 264 (322)
T ss_dssp EESCSSSSCCBCCEEEEEEECCCCCCCCCCSCSEEEE-EECSCCSSCCEEEEEECCCSSCGGGTCCEEEEC---CCSSBC
T ss_pred EECCCCCCCceeEEEEEEEEEecCCCCCeecCCCcee-EeECCCCCCcEEEEEEEEeCCCCCCceEEEEEECCCCCCcEE
Confidence 97544 37899999999999999999999999986 8999999999999999999999999999999964 5799
Q ss_pred Ec----c-ceeEEEeeecccCCCCcEEEEEEEEecCC
Q psy11097 420 VD----S-NGVINNHKTLDADNNNAYYEFVITAKDKD 451 (817)
Q Consensus 420 I~----~-~G~i~~~~~ld~e~~~~~~~l~V~a~D~g 451 (817)
|+ + +|.|+++++||||.. ..|.|+|+|+|+|
T Consensus 265 I~~d~~~~tG~i~~~~~LD~E~~-~~y~l~V~A~D~g 300 (322)
T 2a62_A 265 ITSDAQAQDGVIRLRKPLDFETK-KSYTLKVEAANIH 300 (322)
T ss_dssp CBCCTTTSEEEEEBCSCCCCSSC-CEEEEEEEEECCC
T ss_pred EeccCCCceEEEEECCcCCcccC-CeEEEEEEEEECC
Confidence 98 3 699999999999997 5899999999986
No 14
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=100.00 E-value=3.2e-44 Score=387.15 Aligned_cols=299 Identities=23% Similarity=0.353 Sum_probs=224.5
Q ss_pred EEEEEEEEeCCCCCceeEEEeecccCCccEEEEEEeCCCCCCCeEEeCceeEEEeCccCCccccCC--CeEEEEEEEEEe
Q psy11097 271 LVTTVVASDKDGDNVSIISVKAKSFADREIRYTLKAQGQGAGTFNIGPTSGIVKLAKELDFEDLRQ--PHVYSLIVTATE 348 (817)
Q Consensus 271 ~v~~v~A~D~D~~~~~i~~~~~~~~~~~~i~y~l~~~g~~~~~F~Id~~tG~i~~~~~LD~E~~~~--~~~y~l~V~a~d 348 (817)
.+.++.|+|+|.+.++.+.+.... .+..++|+|. .+..+|.|++ +|.|++.++||||.... ...|.|.|+|.|
T Consensus 5 p~~~~~atd~D~g~ng~v~y~l~~-~~~~~~f~i~---~~~~~F~i~~-tG~l~~~~~LD~E~~~~~~~~~~~l~v~a~d 79 (316)
T 3ubf_A 5 PTKRIEFTEADGDTEGKSVFQLEK-ETDKETFKIR---DDNPWVTVET-NGAVRVKKKWDYEELGPEKTIDFWVIITNMG 79 (316)
T ss_dssp EEEEEEEESGGGCSTTCEEEECCC-SSTTCEEEES---SCCSSEEECT-TSEEEESSCCCGGGSCTTCEEEEEEEEEC--
T ss_pred ceEEEEEEecCCCCCceEEEEEEc-CCCcceEEEe---CCCCeEEECC-CeEEEECCccChhhcccccceEEEEEEEEcC
Confidence 455666666666544433333322 2235678885 2346899999 99999999999998532 257888888885
Q ss_pred CCC---CceEEEEEEEEEEeeCCCCCcccCCC--cceEEeeCCCCCCcEEEEEEEEeCCCCCCceEEEEEec----CceE
Q psy11097 349 DSG---GFSTSVELTIRVTDVNDNAPKFELPD--YQAHNIDEDITTGTSILKVKATDADSGTNAEIEYHVSD----DNFA 419 (817)
Q Consensus 349 ~~g---~~~~~~~v~I~V~DvNDn~P~f~~~~--y~~~~V~E~~~~Gt~v~~v~A~D~D~g~n~~i~y~i~~----~~F~ 419 (817)
+| ++++.+.|+|+|.|+|||+|.|.... |.. .|+|++++|+.|+++.|+|+|.|.| ++|+|.. +.|.
T Consensus 80 -~~~~~~~s~~~~v~I~V~DvNDn~P~F~~~~~~y~~-~v~En~~~gt~v~~v~A~D~D~g~n--i~Y~i~~~~~~~~F~ 155 (316)
T 3ubf_A 80 -HNAGIKYTDNQRVIILVKDVNDEPPYFINRPLPMQA-VVQLNAPPNTPVFTLQARDPDTDHN--IHYFIVRDRTGGRFE 155 (316)
T ss_dssp ------CCCEEEEEEEEEECTTCCCCEECCSSSSEEE-EECTTCCTTCEEEECCEECSSTTCC--EEEEEEEEESSSCEE
T ss_pred -CCCCCcccceEEEEEEEEECCCCCCccCCCCCCEEE-EEeCCCCCCCEEEEEEEECCCCCCc--eEEEEEeCCCCCEEE
Confidence 33 46899999999999999999999876 665 7999999999999999999999987 8999853 3455
Q ss_pred Ecc-ceeEEEeeecccCCCCcEEEEEEEEecCCceEEEEEEeCCCCCCccCCCccceeEeeccCCcCeEEEEEEEEEEee
Q psy11097 420 VDS-NGVINNHKTLDADNNNAYYEFVITAKDKDVDVELDVVDRNNKPPLWDNAIYGPIHIRENVTVSTVVTSVKARFGFV 498 (817)
Q Consensus 420 I~~-~G~i~~~~~ld~e~~~~~~~l~V~a~D~g~~v~I~V~d~Nd~~P~f~~~~y~~i~v~E~~~~g~~v~~v~a~~~~~ 498 (817)
|++ +|.|+++++||||...
T Consensus 156 Id~~tG~i~~~~~lD~e~~~------------------------------------------------------------ 175 (316)
T 3ubf_A 156 VDERSGVVRTRGTDLFQLDM------------------------------------------------------------ 175 (316)
T ss_dssp ECTTTCEEEECSSCCCCTTC------------------------------------------------------------
T ss_pred EECCccEEEECCcCCcccCc------------------------------------------------------------
Confidence 554 4555555555555431
Q ss_pred cCCcccccEEEEccccEEEEcccccccccccEEEEEEEEeCCccccCCCCCcceeeEEEEEEEeecCCCCCccccCCCce
Q psy11097 499 GGSTSSGQFVIEDITGVIRLNSKSISLDRDKYELNVTAVDDGACCANGDQSVHTATAVVVVFITDVNDNKPVFRECSTYY 578 (817)
Q Consensus 499 ~~~~~~~~F~Id~~tG~i~~~~~~~~ld~e~y~l~V~a~D~~~~~~~~~~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~ 578 (817)
.|.|+|+|+|+++.. ..+++++++.++|.|.| |||+|.|.+ ..|.
T Consensus 176 ------------------------------~y~l~V~A~D~g~~~---~~~~~~~~~~v~I~V~d-nDn~P~F~~-~~y~ 220 (316)
T 3ubf_A 176 ------------------------------EYVLYVKAEDQNGKV---DDRRFQSTPEERLSIVG-GKRAPQFYM-PSYE 220 (316)
T ss_dssp ------------------------------EEEEEEEEEESCC----------CBCCCEEEEEEE-SCCCCEESS-SSEE
T ss_pred ------------------------------EEEEEEEEEeCCCCC---CCccccceEEEEEEEEc-CCCCCEEcC-CCce
Confidence 466677777765421 01346778889999999 999999998 7899
Q ss_pred eEEecCCCCCceEEEEEEecCCCCCCceEEEEEEecCCCCCccEEEecccceEEecccccccCCCC-cEEEEEEEEEeCC
Q psy11097 579 PKVEEGAPNGSPVIKVHATDEDKGVNGQVKYSIVQQPNQKGAKFTVDEETGEVVTNKVFDREGDDG-KFVSVTIKATDQG 657 (817)
Q Consensus 579 ~~v~En~~~gt~v~~v~A~D~D~g~n~~v~y~l~~~~~~~~~~F~Id~~tG~i~~~~~lD~E~~~~-~~~~l~V~a~D~g 657 (817)
+.|+||.++|+.|++|.|+|+| |+.++|+|.... ...++|.|++.+|.|++.++||||.... ..|.|+|+|+|.+
T Consensus 221 ~~v~En~~~gt~v~~v~A~D~D---n~~i~Y~i~~~~-~~~~~F~Id~~tG~i~~~~~LD~E~~~~~~~y~l~V~A~dd~ 296 (316)
T 3ubf_A 221 AEIPENQKKDSDIISIKAKSFA---DREIRYTLKAQG-QGAGTFNIGPTSGIVKLAKELDFEDLRQPHVYSLIVTATEDS 296 (316)
T ss_dssp EEEETTCCTTCEEEECCEECTT---CCCEEEEEEEES-SCTTTEEECTTTCEEEECSCCCSSCTTSCSEEEEEEEEEESS
T ss_pred EEEeCCCCCCCEEEEEEEEeCC---CCEEEEEEEcCC-CCCCeEEEECCeEEEEECCcCCccccCCCceEEEEEEEEECC
Confidence 9999999999999999999998 678999998422 2345899999999999999999998621 3699999999533
Q ss_pred CCCceeEEEEEEEEEecCCCC
Q psy11097 658 EPSLEGVCSFTVEITDVNDNP 678 (817)
Q Consensus 658 ~p~~s~~~~v~I~V~DvNDn~ 678 (817)
. +++++++|+|+|+|+||||
T Consensus 297 g-~~~~~~~v~I~V~DvNDn~ 316 (316)
T 3ubf_A 297 G-GFSTSVDLTIRVTDVNDNA 316 (316)
T ss_dssp S-SCEEEEEEEEEEECC----
T ss_pred C-CCEEEEEEEEEEEecCCCC
Confidence 3 5899999999999999986
No 15
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=100.00 E-value=1.7e-37 Score=314.12 Aligned_cols=206 Identities=29% Similarity=0.417 Sum_probs=184.2
Q ss_pred CCCCeeecCCCCeEEEEeccCCCCceEEEEEeecCCCCccEEEEEEecCCCCceEEEcceeEEEeccCCCcccccEEEEE
Q psy11097 98 DESPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDSDHNIHYFIVRDRTGGRFEVDERSGVVRTRGTDPFQLDQEYVLY 177 (817)
Q Consensus 98 Dn~P~F~~~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g~~~~y~l~~~~~~~~F~Id~~tG~i~~~~~ld~e~~~~y~l~ 177 (817)
|++|+|.+..+...++|+|++|+|+.|+++.|+|+|.+ .++|+|.+++..++|.|++.+|+|+++++||||....|.|+
T Consensus 3 n~~P~F~~~~y~~~~~V~E~~~~Gt~v~~v~A~D~D~~-~~~y~i~~~~~~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~ 81 (210)
T 3mvs_A 3 NRLPFFTNHFFDTYLLISEDTPVGSSVTQLLARDMDND-PLVFGVSGEEASRFFAVEPDTGVVWLRQPLDRETKSEFTVE 81 (210)
T ss_dssp CCCCEECCGGGTSCEEEETTCCTTCEEEECCEECTTCC-CCEEEEESHHHHHHEEECTTTCEEEESSCCCTTTCCEEEEE
T ss_pred CCCCccCCCccceEEEEeCCCCCCCEEEEEEEEeCCCC-cEEEEEeCCCCCCcEEEeCCCCEEEECCccCCcccceEEEE
Confidence 68999997765433679999999999999999999965 58999987655678999999999999999999999999999
Q ss_pred EEEEecCCcccccccccCccEEEEEeCCCCCCeeeccceEEEecccccCCCCCCcceEEEEEEEEEeeCCCCCCcCcCce
Q psy11097 178 VKAEDQNGRKDERKFQSTPEERLSIVGGKRAPQFYMPSYEAEIPENQKKDTEYPSMTGTATVRIYTKNKNDEEPKFSQQV 257 (817)
Q Consensus 178 v~a~D~~g~~~~~~~~~~~~~~~~i~~~~~~p~f~~~~y~~~i~e~~~~d~~~p~~s~~~~v~I~V~DvNDn~P~f~~~~ 257 (817)
|+|+|+++ .+++.|+|+|.|+|||+|.|.+..
T Consensus 82 v~a~D~~~------------------------------------------------~~~~~v~I~V~DvNDn~P~f~~~~ 113 (210)
T 3mvs_A 82 FSVSDHQG------------------------------------------------VITRKVNIQVGDVNDNAPTFHNQP 113 (210)
T ss_dssp EEEECSSC------------------------------------------------EEEEEEEEEEECCCCCCCEECSCS
T ss_pred EEEEeCCC------------------------------------------------CEEEEEEEEEEeCCCCCCcCCCce
Confidence 99999764 246789999999999999999999
Q ss_pred eeEEEeCCCCCCcEEEEEEEEeCCCCCceeEEEeecccCCccEEEEEEeCCCCCCCeEEeCceeEEEeCccCCccccCCC
Q psy11097 258 YTPNVDENAGPNTLVTTVVASDKDGDNVSIISVKAKSFADREIRYTLKAQGQGAGTFNIGPTSGIVKLAKELDFEDLRQP 337 (817)
Q Consensus 258 y~~~V~En~~~gt~v~~v~A~D~D~~~~~i~~~~~~~~~~~~i~y~l~~~g~~~~~F~Id~~tG~i~~~~~LD~E~~~~~ 337 (817)
|.+.|+|++++|+.|+++.|+|+|.+ .|+.++|+|. ...+.|.|++.+|.|++.++||||..
T Consensus 114 y~~~v~E~~~~gt~v~~v~A~D~D~g------------~n~~v~Y~i~---~~~~~F~Id~~tG~i~~~~~LD~E~~--- 175 (210)
T 3mvs_A 114 YSVRIPENTPVGTPIFIVNATDPDLG------------AGGSVLYSFQ---PPSPFFAIDSARGIVTVIQELDYEVT--- 175 (210)
T ss_dssp EEEEEETTCCTTCEEEECCEECCSSG------------GGGCEEEEES---SCCSSEEECTTTCEEEECSCCCTTTC---
T ss_pred EEEEEECCCCCCCEEEEEEEEeCCCC------------CCceEEEEEe---CCCCCEEEeCCcEEEEECCcCCCccc---
Confidence 99999999999999999999999987 3678999995 23579999999999999999999984
Q ss_pred eEEEEEEEEEeCCC--CceEEEEEEEEEEeeCCCC
Q psy11097 338 HVYSLIVTATEDSG--GFSTSVELTIRVTDVNDNA 370 (817)
Q Consensus 338 ~~y~l~V~a~d~~g--~~~~~~~v~I~V~DvNDn~ 370 (817)
..|.|+|+|+|.+| .+++++.|+|+|.|+|||+
T Consensus 176 ~~y~l~V~a~D~g~~~~~s~~~~v~I~V~DvND~~ 210 (210)
T 3mvs_A 176 QAYQLTVNATDQDKTRPLSTLANLAIIITDMQDMD 210 (210)
T ss_dssp SEEEEEEEEEECCSSSCCEEEEEEEEEEECCCCCC
T ss_pred ceEEEEEEEEECCCCCCCEEEEEEEEEEEccCCCC
Confidence 78999999997543 3899999999999999986
No 16
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=100.00 E-value=4.9e-36 Score=303.58 Aligned_cols=203 Identities=27% Similarity=0.410 Sum_probs=171.4
Q ss_pred eEEEEeccC--CCCceEEEEEeecCCCCc-cEEEEEEecCCCCceEEEcceeEEEeccCCCcccccEEEEEEEEEecCCc
Q psy11097 110 MQAVVQLNA--PPNTPVFTLQARDPDSDH-NIHYFIVRDRTGGRFEVDERSGVVRTRGTDPFQLDQEYVLYVKAEDQNGR 186 (817)
Q Consensus 110 ~~~~v~E~~--~~gt~v~~v~A~D~D~g~-~~~y~l~~~~~~~~F~Id~~tG~i~~~~~ld~e~~~~y~l~v~a~D~~g~ 186 (817)
++++|.|+. |.|+.|+++ |+|+|.|. .++|+|.+++..++|+|++.+|.|++++.||||....|.|+|+|+|+++.
T Consensus 6 ~~~~v~En~~~p~~~~v~~v-a~D~D~gn~~i~Y~l~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~~~ 84 (215)
T 2a4e_A 6 NQFFVIEEYTGPDPVLVGRL-HSDIDSGDGNIKYILSGEGAGTIFVIDDKSGNIHATKTLDREERAQYTLMAQAVDRDTN 84 (215)
T ss_dssp CEEEEETTCCSSSCEEEEEC-CCTTCCSSSCEEEEEEETTBTTTEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTTC
T ss_pred eeEEEeccCCCCCCEEEEEE-EECCCCCCCeEEEEEECCCCCCeEEEECCceEEEECCccCCccCCEEEEEEEEEECCCC
Confidence 467799994 689999888 89999983 39999987766679999999999999999999999999999999997631
Q ss_pred ccccccccCccEEEEEeCCCCCCeeeccceEEEecccccCCCCCCcceEEEEEEEEEeeCCCCCCcCcCceeeEEEeCCC
Q psy11097 187 KDERKFQSTPEERLSIVGGKRAPQFYMPSYEAEIPENQKKDTEYPSMTGTATVRIYTKNKNDEEPKFSQQVYTPNVDENA 266 (817)
Q Consensus 187 ~~~~~~~~~~~~~~~i~~~~~~p~f~~~~y~~~i~e~~~~d~~~p~~s~~~~v~I~V~DvNDn~P~f~~~~y~~~V~En~ 266 (817)
+++++++.|+|+|.|+|||+|.|.+..|.++|+|++
T Consensus 85 --------------------------------------------~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~ 120 (215)
T 2a4e_A 85 --------------------------------------------RPLEPPSEFIVKVQDINDNPPEFLHEIYHANVPERS 120 (215)
T ss_dssp --------------------------------------------CEEEEEEEEEEEEECCCCCCCEESSSSEEEEEETTC
T ss_pred --------------------------------------------CcccccEEEEEEEeeCCCCCCCccCCceEEEEECCC
Confidence 346788999999999999999999999999999999
Q ss_pred CCCcEEEEEEEEeCCCCCceeEEEeecccCCccEEEEEEeCCCCCCCeEEeCceeEEEeC-ccCCccccCCCeEEEEEEE
Q psy11097 267 GPNTLVTTVVASDKDGDNVSIISVKAKSFADREIRYTLKAQGQGAGTFNIGPTSGIVKLA-KELDFEDLRQPHVYSLIVT 345 (817)
Q Consensus 267 ~~gt~v~~v~A~D~D~~~~~i~~~~~~~~~~~~i~y~l~~~g~~~~~F~Id~~tG~i~~~-~~LD~E~~~~~~~y~l~V~ 345 (817)
++|+.|++|.|+|+|.+..+ .|+.++|+|.. + ...|.|++.+|.|++. ++||||.. ..|.|.|+
T Consensus 121 ~~Gt~v~~v~A~D~D~~~~G---------~n~~i~Y~i~~-~--~~~F~Id~~tG~I~~~~~~LD~E~~---~~y~l~V~ 185 (215)
T 2a4e_A 121 NVGTSVIQVTASDADDPTYG---------NSAKLVYSILE-G--QPYFSVEAQTGIIRTALPNMDREAK---EEYHVVIQ 185 (215)
T ss_dssp CTTCEEEECCEECSSCTTTC---------SSSCCEEEEEE-S--TTTEEECTTTCEEEECSSCCCSSSC---SEEEEEEE
T ss_pred CCCCEEEEEEEEECCCCCCC---------CceEEEEEEeC-C--CCcEEEeCCccEEEEcccCCCcccC---CEEEEEEE
Confidence 99999999999999962111 36789999984 3 3689999999999999 99999984 78999999
Q ss_pred EEeCCC---CceEEEEEEEEEEeeCCCCCc
Q psy11097 346 ATEDSG---GFSTSVELTIRVTDVNDNAPK 372 (817)
Q Consensus 346 a~d~~g---~~~~~~~v~I~V~DvNDn~P~ 372 (817)
|+|.++ ++++++.|+|+|.|+|||+|+
T Consensus 186 A~D~g~~~~~~s~~~~v~I~V~DvNDn~P~ 215 (215)
T 2a4e_A 186 AKDMGGHMGGLSGTTKVTITLTDDYKDDDK 215 (215)
T ss_dssp EETTTTCTTCCEEEEEEEEEEEC-------
T ss_pred EEECCCCCCCceeEEEEEEEEEECCCCCCC
Confidence 996443 479999999999999999995
No 17
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-37 Score=322.68 Aligned_cols=210 Identities=19% Similarity=0.207 Sum_probs=178.9
Q ss_pred eeecCCCCeEEEEeccCCCCceEEEEEeecCCCCccEEEEEE----------ecCCCCceEEEcceeEEEeccCCCcccc
Q psy11097 102 YFINRPLPMQAVVQLNAPPNTPVFTLQARDPDSDHNIHYFIV----------RDRTGGRFEVDERSGVVRTRGTDPFQLD 171 (817)
Q Consensus 102 ~F~~~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g~~~~y~l~----------~~~~~~~F~Id~~tG~i~~~~~ld~e~~ 171 (817)
.|.+. .|.+.|+|++|+|+.|++|+|+|+|.|..+.|+|. .+ ..++|.|++.||+|+++++||||..
T Consensus 2 ~F~~~--~Y~~~V~E~~~~Gt~v~~v~A~D~D~g~~~~~~i~~~~~~~y~i~~~-~~~~F~Id~~tG~i~~~~~LDrE~~ 78 (246)
T 2x2u_A 2 YFSRD--AYWEKLYVDQAAGTPLLYVHALRDAPEEVPSFRLGQHLYGTYRTRLH-ENNWIRIQEDTGLLYLQRSLDHSSW 78 (246)
T ss_dssp EESCS--EEEEEEETTBCTTCEEEECCEECSSTTCCCCCEECSEEECGGGCEEE-ECCSEEECTTTCEEEESSCBCHHHH
T ss_pred CccCC--ceEEEeeCCCCCCCEEEEEEEEcCCCCCcceEEEeeccccceeccCC-CCCEEEECCCcEEEEECCcCChhHh
Confidence 47654 37889999999999999999999999765555553 23 4578999999999999999999999
Q ss_pred cEE------------EEEEEEEecCCcccccccccCccEEEEEeCCCCCCeeeccceEEEecccccCCCCCCcceEEEEE
Q psy11097 172 QEY------------VLYVKAEDQNGRKDERKFQSTPEERLSIVGGKRAPQFYMPSYEAEIPENQKKDTEYPSMTGTATV 239 (817)
Q Consensus 172 ~~y------------~l~v~a~D~~g~~~~~~~~~~~~~~~~i~~~~~~p~f~~~~y~~~i~e~~~~d~~~p~~s~~~~v 239 (817)
..| .|+|.|+|+++.. +++++++.|
T Consensus 79 ~~y~~~~~G~p~~~~~l~V~a~D~g~~~-------------------------------------------~~~~~~~~v 115 (246)
T 2x2u_A 79 EKLSVRNRGFPLLTVYLKVFLSPTSLRE-------------------------------------------GECQWPGCA 115 (246)
T ss_dssp HHHHHTSTTSCCCEEEEEEECC--------------------------------------------------CCCTTTEE
T ss_pred hhhccccCCCcccceEEEEEEEcCCCCC-------------------------------------------CcccceEEE
Confidence 999 9999999976420 135677899
Q ss_pred EEEEeeCCCCCCc----------CcCceeeEEEeCCCCCCcEEEEEEEEeCCCCCceeEEEeecccCCccEEEEEEeCCC
Q psy11097 240 RIYTKNKNDEEPK----------FSQQVYTPNVDENAGPNTLVTTVVASDKDGDNVSIISVKAKSFADREIRYTLKAQGQ 309 (817)
Q Consensus 240 ~I~V~DvNDn~P~----------f~~~~y~~~V~En~~~gt~v~~v~A~D~D~~~~~i~~~~~~~~~~~~i~y~l~~~g~ 309 (817)
+|+|.|+|||+|. |.+..|.++|+||.++|+.|++|.|+|+|.+ .|+.++|+|.. ++
T Consensus 116 ~I~V~DvNDn~P~~~~~~~~~~~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g------------~n~~i~Y~i~~-~~ 182 (246)
T 2x2u_A 116 RVYFSFFNTSFPACSSLKPRELCFPETRPSFRIRENRPPGTFHQFRLLPVQFLC------------PQISVAYRLLE-GE 182 (246)
T ss_dssp EEEEEEESSCCCCGGGCCHHHHHSCSSCCCEEEEBTSCCCEEEECSCHHHHHHC------------TTSCEEEEEES-CT
T ss_pred EEEEEECCCCCCccccccccccccCCCcEEEEEECCCCCCcEEEEEEEEcCCCC------------CCcEEEEEEcc-CC
Confidence 9999999999999 9999999999999999999999999999987 46889999983 33
Q ss_pred CCCCeEEeCceeEEEeCccCCccccCCCeEEEEEEEEEe-CCC-CceEEEEEEEEEEeeCCCCCccc
Q psy11097 310 GAGTFNIGPTSGIVKLAKELDFEDLRQPHVYSLIVTATE-DSG-GFSTSVELTIRVTDVNDNAPKFE 374 (817)
Q Consensus 310 ~~~~F~Id~~tG~i~~~~~LD~E~~~~~~~y~l~V~a~d-~~g-~~~~~~~v~I~V~DvNDn~P~f~ 374 (817)
.+.|.|++.||.|++.++||||.. ..|.|+|.|+| +++ .+++++.|.|+|+|+|||+|.|.
T Consensus 183 -~~~F~Id~~tG~i~~~~~LDrE~~---~~y~l~V~A~d~dg~p~~ss~~~v~I~V~DvNDn~P~F~ 245 (246)
T 2x2u_A 183 -GLPFRSAPDSLEVSTRWALDREQR---EKYELVAVCTVHAGAREEVVMVPFPVTVYDEDDSAPEFE 245 (246)
T ss_dssp -TSSEECCTTCCEEEESSCBCTTTC---SEEEEEEEEEEC---CCEEEEEEEEEEEECSSCCSCCCC
T ss_pred -CCCEEEECCcCEEEeCCccCcccc---ceEEEEEEEEecCCCCcceEEEEEEEEEEEeCCCCCccC
Confidence 789999999999999999999984 78999999987 443 48999999999999999999995
No 18
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=100.00 E-value=2.6e-36 Score=305.51 Aligned_cols=199 Identities=26% Similarity=0.408 Sum_probs=177.6
Q ss_pred CCCCccccCCCce--eEEecCCCCCceEEEEEEecCCCCCCceEEEEEEecCCCCCccEEEecccceEEecccccccCCC
Q psy11097 566 DNKPVFRECSTYY--PKVEEGAPNGSPVIKVHATDEDKGVNGQVKYSIVQQPNQKGAKFTVDEETGEVVTNKVFDREGDD 643 (817)
Q Consensus 566 Dn~P~f~~~~~~~--~~v~En~~~gt~v~~v~A~D~D~g~n~~v~y~l~~~~~~~~~~F~Id~~tG~i~~~~~lD~E~~~ 643 (817)
|++|.|.+ ..|. +.|+|++++|+.|+++.|+|+|. +.++|+|.++. ..++|.|++.+|.|++.++||||..
T Consensus 3 n~~P~F~~-~~y~~~~~V~E~~~~Gt~v~~v~A~D~D~---~~~~y~i~~~~--~~~~F~Id~~tG~i~~~~~LD~E~~- 75 (210)
T 3mvs_A 3 NRLPFFTN-HFFDTYLLISEDTPVGSSVTQLLARDMDN---DPLVFGVSGEE--ASRFFAVEPDTGVVWLRQPLDRETK- 75 (210)
T ss_dssp CCCCEECC-GGGTSCEEEETTCCTTCEEEECCEECTTC---CCCEEEEESHH--HHHHEEECTTTCEEEESSCCCTTTC-
T ss_pred CCCCccCC-CccceEEEEeCCCCCCCEEEEEEEEeCCC---CcEEEEEeCCC--CCCcEEEeCCCCEEEECCccCCccc-
Confidence 45999997 6776 58999999999999999999995 46899997542 2358999999999999999999997
Q ss_pred CcEEEEEEEEEeCCCCCceeEEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCCCCCceEEEEEecC
Q psy11097 644 GKFVSVTIKATDQGEPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDASIGTNILRVSASDEDADNNGAIVYTLSAP 723 (817)
Q Consensus 644 ~~~~~l~V~a~D~g~p~~s~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~g~n~~i~Y~l~~~ 723 (817)
..|.|+|.|+|++. .++++|+|+|.|+|||+|.|.+..|.+.|+|+.++|+.|++++|+|+|.|.|+.++|+|..+
T Consensus 76 -~~y~l~v~a~D~~~---~~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~gt~v~~v~A~D~D~g~n~~v~Y~i~~~ 151 (210)
T 3mvs_A 76 -SEFTVEFSVSDHQG---VITRKVNIQVGDVNDNAPTFHNQPYSVRIPENTPVGTPIFIVNATDPDLGAGGSVLYSFQPP 151 (210)
T ss_dssp -CEEEEEEEEECSSC---EEEEEEEEEEECCCCCCCEECSCSEEEEEETTCCTTCEEEECCEECCSSGGGGCEEEEESSC
T ss_pred -ceEEEEEEEEeCCC---CEEEEEEEEEEeCCCCCCcCCCceEEEEEECCCCCCCEEEEEEEEeCCCCCCceEEEEEeCC
Confidence 56999999999875 35789999999999999999999999999999999999999999999999999999999652
Q ss_pred cCCCCCcceEEeCCeeEEEEeeeceEEEEEeeCCCCCCcccEEEeCceeEEEEcccCCcccccEEEEEEEEEeCC-CCCC
Q psy11097 724 YNQMDLEYFEIQPESGWIVLKKPLDVYYYIVDSPRNEGKDFFEINLQSGEVFTKVVFDREKQGAYALEVEARDGA-PSAR 802 (817)
Q Consensus 724 ~~~~~~~~F~Id~~tG~i~~~~~ld~~y~~~~~~~~~~~~~F~Id~~tG~l~~~~~LDrE~~~~y~l~V~a~D~g-~p~~ 802 (817)
.++|.|++.+|.|++.+.||||.++.|.|+|+|+|+| .|++
T Consensus 152 --------------------------------------~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~a~D~g~~~~~ 193 (210)
T 3mvs_A 152 --------------------------------------SPFFAIDSARGIVTVIQELDYEVTQAYQLTVNATDQDKTRPL 193 (210)
T ss_dssp --------------------------------------CSSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEECCSSSCC
T ss_pred --------------------------------------CCCEEEeCCcEEEEECCcCCCcccceEEEEEEEEECCCCCCC
Confidence 3478888899999999999999999999999999987 6889
Q ss_pred CCCCCCCCccc
Q psy11097 803 PNSDGEPNSAC 813 (817)
Q Consensus 803 ~~~~~~~v~v~ 813 (817)
+++.+++|+|.
T Consensus 194 s~~~~v~I~V~ 204 (210)
T 3mvs_A 194 STLANLAIIIT 204 (210)
T ss_dssp EEEEEEEEEEE
T ss_pred EEEEEEEEEEE
Confidence 98888887764
No 19
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.3e-36 Score=312.75 Aligned_cols=218 Identities=21% Similarity=0.218 Sum_probs=172.1
Q ss_pred cccCCCcceEEeeCCCCCCcEEEEEEEEeCCCCCCceEEEEEecCceEEccceeEEEeeecccCCCCcEEEEEEEEecCC
Q psy11097 372 KFELPDYQAHNIDEDITTGTSILKVKATDADSGTNAEIEYHVSDDNFAVDSNGVINNHKTLDADNNNAYYEFVITAKDKD 451 (817)
Q Consensus 372 ~f~~~~y~~~~V~E~~~~Gt~v~~v~A~D~D~g~n~~i~y~i~~~~F~I~~~G~i~~~~~ld~e~~~~~~~l~V~a~D~g 451 (817)
.|.+..|.. .|+|++++|+.|++|.|+|+|.|. .+.|+|.++.+
T Consensus 2 ~F~~~~Y~~-~V~E~~~~Gt~v~~v~A~D~D~g~--~~~~~i~~~~~--------------------------------- 45 (246)
T 2x2u_A 2 YFSRDAYWE-KLYVDQAAGTPLLYVHALRDAPEE--VPSFRLGQHLY--------------------------------- 45 (246)
T ss_dssp EESCSEEEE-EEETTBCTTCEEEECCEECSSTTC--CCCCEECSEEE---------------------------------
T ss_pred CccCCceEE-EeeCCCCCCCEEEEEEEEcCCCCC--cceEEEeeccc---------------------------------
Confidence 588889986 899999999999999999999864 34555532100
Q ss_pred ceEEEEEEeCCCCCCccCCCccceeEeeccCCcCeEEEEEEEEEEeecCCcccccEEEEccccEEEEcccccccccc---
Q psy11097 452 VDVELDVVDRNNKPPLWDNAIYGPIHIRENVTVSTVVTSVKARFGFVGGSTSSGQFVIEDITGVIRLNSKSISLDRD--- 528 (817)
Q Consensus 452 ~~v~I~V~d~Nd~~P~f~~~~y~~i~v~E~~~~g~~v~~v~a~~~~~~~~~~~~~F~Id~~tG~i~~~~~~~~ld~e--- 528 (817)
..|. +.. ...++|.|++.+|.|++.+ .||||
T Consensus 46 -------------------~~y~----------------------i~~--~~~~~F~Id~~tG~i~~~~---~LDrE~~~ 79 (246)
T 2x2u_A 46 -------------------GTYR----------------------TRL--HENNWIRIQEDTGLLYLQR---SLDHSSWE 79 (246)
T ss_dssp -------------------CGGG----------------------CEE--EECCSEEECTTTCEEEESS---CBCHHHHH
T ss_pred -------------------ccee----------------------ccC--CCCCEEEECCCcEEEEECC---cCChhHhh
Confidence 0000 000 1235677777777777665 45554
Q ss_pred cE------------EEEEEEEeCCccccCCCCCcceeeEEEEEEEeecCCCCCc----------cccCCCceeEEecCCC
Q psy11097 529 KY------------ELNVTAVDDGACCANGDQSVHTATAVVVVFITDVNDNKPV----------FRECSTYYPKVEEGAP 586 (817)
Q Consensus 529 ~y------------~l~V~a~D~~~~~~~~~~~~~~~~~~v~I~V~DvNDn~P~----------f~~~~~~~~~v~En~~ 586 (817)
.| .|+|.|+|++.+. .++++++.|.|+|+|+|||+|+ |.+ ..|.+.|+||.+
T Consensus 80 ~y~~~~~G~p~~~~~l~V~a~D~g~~~-----~~~~~~~~v~I~V~DvNDn~P~~~~~~~~~~~F~~-~~y~~~v~En~~ 153 (246)
T 2x2u_A 80 KLSVRNRGFPLLTVYLKVFLSPTSLRE-----GECQWPGCARVYFSFFNTSFPACSSLKPRELCFPE-TRPSFRIRENRP 153 (246)
T ss_dssp HHHHTSTTSCCCEEEEEEECC------------CCCTTTEEEEEEEEESSCCCCGGGCCHHHHHSCS-SCCCEEEEBTSC
T ss_pred hhccccCCCcccceEEEEEEEcCCCCC-----CcccceEEEEEEEEECCCCCCccccccccccccCC-CcEEEEEECCCC
Confidence 56 9999999988631 1467788999999999999999 997 789999999999
Q ss_pred CCceEEEEEEecCCCCCCceEEEEEEecCCCCCccEEEecccceEEecccccccCCCCcEEEEEEEEEe-CCCCCceeEE
Q psy11097 587 NGSPVIKVHATDEDKGVNGQVKYSIVQQPNQKGAKFTVDEETGEVVTNKVFDREGDDGKFVSVTIKATD-QGEPSLEGVC 665 (817)
Q Consensus 587 ~gt~v~~v~A~D~D~g~n~~v~y~l~~~~~~~~~~F~Id~~tG~i~~~~~lD~E~~~~~~~~l~V~a~D-~g~p~~s~~~ 665 (817)
+|+.|+++.|+|+|.|.|+.++|+|.++. ..+|.|++.+|.|++.++||||.. ..|.|+|.|+| .|.|++++++
T Consensus 154 ~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~---~~~F~Id~~tG~i~~~~~LDrE~~--~~y~l~V~A~d~dg~p~~ss~~ 228 (246)
T 2x2u_A 154 PGTFHQFRLLPVQFLCPQISVAYRLLEGE---GLPFRSAPDSLEVSTRWALDREQR--EKYELVAVCTVHAGAREEVVMV 228 (246)
T ss_dssp CCEEEECSCHHHHHHCTTSCEEEEEESCT---TSSEECCTTCCEEEESSCBCTTTC--SEEEEEEEEEEC---CCEEEEE
T ss_pred CCcEEEEEEEEcCCCCCCcEEEEEEccCC---CCCEEEECCcCEEEeCCccCcccc--ceEEEEEEEEecCCCCcceEEE
Confidence 99999999999999999999999998753 358999999999999999999998 56999999998 6669999999
Q ss_pred EEEEEEEecCCCCCccC
Q psy11097 666 SFTVEITDVNDNPPLFD 682 (817)
Q Consensus 666 ~v~I~V~DvNDn~P~f~ 682 (817)
+|+|+|+|+|||+|+|.
T Consensus 229 ~v~I~V~DvNDn~P~F~ 245 (246)
T 2x2u_A 229 PFPVTVYDEDDSAPEFE 245 (246)
T ss_dssp EEEEEEECSSCCSCCCC
T ss_pred EEEEEEEEeCCCCCccC
Confidence 99999999999999996
No 20
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=100.00 E-value=4.3e-35 Score=296.64 Aligned_cols=194 Identities=28% Similarity=0.463 Sum_probs=171.9
Q ss_pred CceeEEecCC--CCCceEEEEEEecCCCCCCceEEEEEEecCCCCCccEEEecccceEEecccccccCCCCcEEEEEEEE
Q psy11097 576 TYYPKVEEGA--PNGSPVIKVHATDEDKGVNGQVKYSIVQQPNQKGAKFTVDEETGEVVTNKVFDREGDDGKFVSVTIKA 653 (817)
Q Consensus 576 ~~~~~v~En~--~~gt~v~~v~A~D~D~g~n~~v~y~l~~~~~~~~~~F~Id~~tG~i~~~~~lD~E~~~~~~~~l~V~a 653 (817)
.|.+.|.||. |.|+.|+++ |+|+|.| |+.++|+|.++. ...+|.|++.+|.|++.++||||.. ..|.|+|+|
T Consensus 5 ~~~~~v~En~~~p~~~~v~~v-a~D~D~g-n~~i~Y~l~~~~--~~~~F~Id~~tG~i~~~~~LDrE~~--~~y~l~v~a 78 (215)
T 2a4e_A 5 WNQFFVIEEYTGPDPVLVGRL-HSDIDSG-DGNIKYILSGEG--AGTIFVIDDKSGNIHATKTLDREER--AQYTLMAQA 78 (215)
T ss_dssp CCEEEEETTCCSSSCEEEEEC-CCTTCCS-SSCEEEEEEETT--BTTTEEECTTTCEEEECSCCCTTTC--SEEEEEEEE
T ss_pred EeeEEEeccCCCCCCEEEEEE-EECCCCC-CCeEEEEEECCC--CCCeEEEECCceEEEECCccCCccC--CEEEEEEEE
Confidence 4677899994 578889988 8999998 889999998642 2348999999999999999999998 569999999
Q ss_pred EeCCC-CCceeEEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCC---CCCceEEEEEecCcCCCCC
Q psy11097 654 TDQGE-PSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDASIGTNILRVSASDEDA---DNNGAIVYTLSAPYNQMDL 729 (817)
Q Consensus 654 ~D~g~-p~~s~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~---g~n~~i~Y~l~~~~~~~~~ 729 (817)
+|+|. ++++++++|+|+|.|+|||+|.|.+..|.+.|+|++++|+.|++|+|+|+|. |.|+.++|+|..+
T Consensus 79 ~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~Gt~v~~v~A~D~D~~~~G~n~~i~Y~i~~~------ 152 (215)
T 2a4e_A 79 VDRDTNRPLEPPSEFIVKVQDINDNPPEFLHEIYHANVPERSNVGTSVIQVTASDADDPTYGNSAKLVYSILEG------ 152 (215)
T ss_dssp EETTTCCEEEEEEEEEEEEECCCCCCCEESSSSEEEEEETTCCTTCEEEECCEECSSCTTTCSSSCCEEEEEES------
T ss_pred EECCCCCcccccEEEEEEEeeCCCCCCCccCCceEEEEECCCCCCCEEEEEEEEECCCCCCCCceEEEEEEeCC------
Confidence 99875 6789999999999999999999999999999999999999999999999997 8899999999763
Q ss_pred cceEEeCCeeEEEEeeeceEEEEEeeCCCCCCcccEEEeCceeEEEEc-ccCCcccccEEEEEEEEEeCCCC--CCCCCC
Q psy11097 730 EYFEIQPESGWIVLKKPLDVYYYIVDSPRNEGKDFFEINLQSGEVFTK-VVFDREKQGAYALEVEARDGAPS--ARPNSD 806 (817)
Q Consensus 730 ~~F~Id~~tG~i~~~~~ld~~y~~~~~~~~~~~~~F~Id~~tG~l~~~-~~LDrE~~~~y~l~V~a~D~g~p--~~~~~~ 806 (817)
...|.|++.||.|+++ +.||||.+..|.|.|+|+|+|.| +++++.
T Consensus 153 --------------------------------~~~F~Id~~tG~I~~~~~~LD~E~~~~y~l~V~A~D~g~~~~~~s~~~ 200 (215)
T 2a4e_A 153 --------------------------------QPYFSVEAQTGIIRTALPNMDREAKEEYHVVIQAKDMGGHMGGLSGTT 200 (215)
T ss_dssp --------------------------------TTTEEECTTTCEEEECSSCCCSSSCSEEEEEEEEETTTTCTTCCEEEE
T ss_pred --------------------------------CCcEEEeCCccEEEEcccCCCcccCCEEEEEEEEEECCCCCCCceeEE
Confidence 2468888888999988 89999999999999999998876 577777
Q ss_pred CCCCccc
Q psy11097 807 GEPNSAC 813 (817)
Q Consensus 807 ~~~v~v~ 813 (817)
+++|+|.
T Consensus 201 ~v~I~V~ 207 (215)
T 2a4e_A 201 KVTITLT 207 (215)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 7777764
No 21
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=100.00 E-value=2.3e-35 Score=299.10 Aligned_cols=201 Identities=23% Similarity=0.319 Sum_probs=177.5
Q ss_pred eeEEecCCCCCceEEEEEEecCCCCCCceEEEEEEecCC--CCCccEEEecccceEEecccccccCCCCcEEEEEEEEEe
Q psy11097 578 YPKVEEGAPNGSPVIKVHATDEDKGVNGQVKYSIVQQPN--QKGAKFTVDEETGEVVTNKVFDREGDDGKFVSVTIKATD 655 (817)
Q Consensus 578 ~~~v~En~~~gt~v~~v~A~D~D~g~n~~v~y~l~~~~~--~~~~~F~Id~~tG~i~~~~~lD~E~~~~~~~~l~V~a~D 655 (817)
.+.|+||++ |+.++++.|.|.|.+.|+.++|+|.++.. ...++|.|++.+|.|++.++||||.. ..|.|+|+|+|
T Consensus 6 ~~~V~En~~-g~~~~~v~~~~~D~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~--~~y~l~v~a~D 82 (215)
T 2qvi_A 6 PINLPENSR-GPFPQELVRIRSDRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELI--ARFHLRAHAVD 82 (215)
T ss_dssp CEEEESSCC-CCSSEEEEECCCGGGGTSCEEEEEESTTSSSTTCSSEEECTTTCEEEECSCCCTTTC--SEEEEEEEEEE
T ss_pred cEEEcCCCC-CCCCEEEEEEeCCCCCCceEEEEEECCCCCCCCCCcEEEeCCccEEEECcccCcccC--CeEEEEEEEEE
Confidence 567999999 99999999999999999999999986421 12358999999999999999999998 56999999999
Q ss_pred CCCCCceeEEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCC--CCCceEEEEEecCcCCCCCcceE
Q psy11097 656 QGEPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDASIGTNILRVSASDEDA--DNNGAIVYTLSAPYNQMDLEYFE 733 (817)
Q Consensus 656 ~g~p~~s~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~--g~n~~i~Y~l~~~~~~~~~~~F~ 733 (817)
+|.|++++++.|+|+|.|+|||+|+|.+..|.+.|+|++++|+.|++|+|+|+|. |.|+.++|+|..+..
T Consensus 83 ~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~~~~-------- 154 (215)
T 2qvi_A 83 INGNQVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRILSQAP-------- 154 (215)
T ss_dssp TTTCCCEEEEEEEEEEECCCCCCCBCSSSEEEEEECSSCCTTCEEEECCCBCSSCTTSTTTCCCCEEEECSS--------
T ss_pred CCCCceeeeEEEEEEEeECCCCCCcccCceeEEEEeCCCCCCCEEEEEEEEeCCCCCCCCcEEEEEEecCCC--------
Confidence 9999999999999999999999999999999999999999999999999999999 789999999986311
Q ss_pred EeCCeeEEEEeeeceEEEEEeeCCCCCCcccEEEeCceeEEEEc-ccCCcccccEEEEEEEEEeCCCC---CCCCCCCCC
Q psy11097 734 IQPESGWIVLKKPLDVYYYIVDSPRNEGKDFFEINLQSGEVFTK-VVFDREKQGAYALEVEARDGAPS---ARPNSDGEP 809 (817)
Q Consensus 734 Id~~tG~i~~~~~ld~~y~~~~~~~~~~~~~F~Id~~tG~l~~~-~~LDrE~~~~y~l~V~a~D~g~p---~~~~~~~~~ 809 (817)
.....+.|.|++.||.|++. +.||||.+..|.|.|+|+|+|.| +++++.+++
T Consensus 155 ------------------------~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~a~D~g~~p~~~ls~t~~v~ 210 (215)
T 2qvi_A 155 ------------------------STPSPNMFTINNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSNTATAV 210 (215)
T ss_dssp ------------------------CCSSTTCEEECTTTCEEEECSCCCCTTTCSEEEEEEECCTTTTCTTTSCCCEEEEE
T ss_pred ------------------------CCCcCCeEEEcCCCcEEEEecCCCCcccCCeEEEEEEEEECCCCCCCCcceEEEEE
Confidence 01124679999999999985 78999999999999999998766 788888888
Q ss_pred Cccc
Q psy11097 810 NSAC 813 (817)
Q Consensus 810 v~v~ 813 (817)
|+|.
T Consensus 211 I~V~ 214 (215)
T 2qvi_A 211 ITVT 214 (215)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 8775
No 22
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=100.00 E-value=1.6e-34 Score=293.14 Aligned_cols=199 Identities=26% Similarity=0.333 Sum_probs=175.2
Q ss_pred eeEEecCCC--CCceEEEEEEecCCCCCCceEEEEEEecCC--CCCccEEEecccceEEecccccccCCCCcEEEEEEEE
Q psy11097 578 YPKVEEGAP--NGSPVIKVHATDEDKGVNGQVKYSIVQQPN--QKGAKFTVDEETGEVVTNKVFDREGDDGKFVSVTIKA 653 (817)
Q Consensus 578 ~~~v~En~~--~gt~v~~v~A~D~D~g~n~~v~y~l~~~~~--~~~~~F~Id~~tG~i~~~~~lD~E~~~~~~~~l~V~a 653 (817)
.+.|+||.+ .|+.|+++.| |+|. |+.++|+|.+... ...++|.|++.+|.|++.++||||.. ..|.|+|+|
T Consensus 6 ~~~V~En~~~~~~~~v~~v~a-D~d~--n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~--~~y~l~v~a 80 (213)
T 3qrb_A 6 AISCPENEKGEFPKNLVQIKS-NRDK--ETKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREAI--AKYILYSHA 80 (213)
T ss_dssp EEEEETTCCSSSSEEEEECCC-GGGG--TSCEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTC--SEEEEEEEE
T ss_pred CEEEeCCCCCCCCcEEEEEEE-CCCC--CceEEEEEEcCCCCCCCCCeEEEECCCCEEEECCccCcccC--ceEEEEEEE
Confidence 577999998 6778999999 7775 7899999986421 22348999999999999999999998 469999999
Q ss_pred EeCCCCCceeEEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCCC---CCceEEEEEecCcCCCCCc
Q psy11097 654 TDQGEPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDASIGTNILRVSASDEDAD---NNGAIVYTLSAPYNQMDLE 730 (817)
Q Consensus 654 ~D~g~p~~s~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~g---~n~~i~Y~l~~~~~~~~~~ 730 (817)
+|+|.|+++++++|+|+|.|+|||+|.|.+..|.+.|+|++++|+.|++|+|+|+|.| .|+.++|+|..+..
T Consensus 81 ~D~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~~~~~~n~~i~Y~i~~~~~----- 155 (213)
T 3qrb_A 81 VSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDP----- 155 (213)
T ss_dssp EETTSCBCSCCEEEEEEEECCSCCCCEESCSEEEEEEETTCCTTCEEEECCEECCSCTTTSSTTCCEEEEEEEES-----
T ss_pred EeCCCCcccceEEEEEEEEEccCCCCccCCCceEEEEECCCCCCcEEEEEEEEeCCCCCCCcCcEEEEEEccCCC-----
Confidence 9999999999999999999999999999999999999999999999999999999999 89999999976311
Q ss_pred ceEEeCCeeEEEEeeeceEEEEEeeCCCCCCcccEEEeCceeEEEEc-ccCCcccccEEEEEEEEEeCCCCCCCCCCCCC
Q psy11097 731 YFEIQPESGWIVLKKPLDVYYYIVDSPRNEGKDFFEINLQSGEVFTK-VVFDREKQGAYALEVEARDGAPSARPNSDGEP 809 (817)
Q Consensus 731 ~F~Id~~tG~i~~~~~ld~~y~~~~~~~~~~~~~F~Id~~tG~l~~~-~~LDrE~~~~y~l~V~a~D~g~p~~~~~~~~~ 809 (817)
.....+.|.|++.||.|++. +.||||.+..|.|.|+|+|+|.|+++++.+++
T Consensus 156 ---------------------------~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~A~D~g~~~~s~t~~v~ 208 (213)
T 3qrb_A 156 ---------------------------ELPHKNMFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGEGLSTTAKAV 208 (213)
T ss_dssp ---------------------------CCSCSCSEEECTTTCEEEECSSCCCTTTCCEEEEEEEEETGGGTSCEEEEEEE
T ss_pred ---------------------------CCCcCCeEEEECCCcEEEEccCCCCCccCceEEEEEEEEeCCCCCceEEEEEE
Confidence 11134689999999999987 78999999999999999999999999998888
Q ss_pred Cccc
Q psy11097 810 NSAC 813 (817)
Q Consensus 810 v~v~ 813 (817)
|+|.
T Consensus 209 I~V~ 212 (213)
T 3qrb_A 209 ITVK 212 (213)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8764
No 23
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=100.00 E-value=5.8e-34 Score=286.28 Aligned_cols=190 Identities=24% Similarity=0.391 Sum_probs=171.1
Q ss_pred ceeEEecCCCCC--ceEEEEEEecCCCCCCceEEEEEEecCCCCCccEEEecccceEEecccccccCCCCcEEEEEEEEE
Q psy11097 577 YYPKVEEGAPNG--SPVIKVHATDEDKGVNGQVKYSIVQQPNQKGAKFTVDEETGEVVTNKVFDREGDDGKFVSVTIKAT 654 (817)
Q Consensus 577 ~~~~v~En~~~g--t~v~~v~A~D~D~g~n~~v~y~l~~~~~~~~~~F~Id~~tG~i~~~~~lD~E~~~~~~~~l~V~a~ 654 (817)
..+.|.||.+.| ..|+++. +|+|.|.+ +|+|.++. ..++|.|++.+|.|++.++||||.. ..|.|+|.|+
T Consensus 5 ~~~~V~En~~~~~~~~v~~v~-~D~D~g~~---~Y~i~~~~--~~~~F~Id~~tG~i~~~~~LDrE~~--~~y~l~v~a~ 76 (203)
T 3ppe_A 5 NRMHIREEIDSPLPHHVGKLT-SSVGNKNA---MYIIEGES--ANTIFKVQGYDGDIYAFERLDREKK--AEYELTAHII 76 (203)
T ss_dssp SEEEEETTCCSSSCEEEEECC-BCCCCTTE---EEEEEETT--BTTTEEEETTTTEEEESSCCCTTTC--CEEEEEEEEE
T ss_pred ccEEEEccCCCCCCEEEEEEE-ecCCCCCc---EEEEecCC--CCCeEEEECCcCEEEECcccccccc--ceEEEEEEEE
Confidence 467899999988 7888888 99999876 99998653 2358999999999999999999998 5699999999
Q ss_pred eCCCC-CceeEEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCC---CCCCceEEEEEecCcCCCCCc
Q psy11097 655 DQGEP-SLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDASIGTNILRVSASDED---ADNNGAIVYTLSAPYNQMDLE 730 (817)
Q Consensus 655 D~g~p-~~s~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D---~g~n~~i~Y~l~~~~~~~~~~ 730 (817)
|+|.| ++++++.|+|+|.|+|||+|.|.+..|.+.|+|++++|+.|++|+|+|+| .|.|+.++|+|..+
T Consensus 77 D~g~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~i~~~------- 149 (203)
T 3ppe_A 77 DRRNNRSLEPPSKFIIKVSDINDNAPIFVQKIFNGSVPEMSRLGTSVTKVTAEDADDPTVAGHATVTYQIIKG------- 149 (203)
T ss_dssp ETTTTEECSCCEEEEEEEECCCCCCCEESCSEEEEEEETTCCTTCEEEECCEECCSCTTSSSTTCEEEEEEES-------
T ss_pred ECCCCCcccceEEEEEEEcCCCCCCCCccCCccEEEEeccCCCCcEEEEEEEEcCCCcCCCCceEEEEEEeCC-------
Confidence 99987 68889999999999999999999999999999999999999999999999 58899999999863
Q ss_pred ceEEeCCeeEEEEeeeceEEEEEeeCCCCCCcccEEEeCceeEEEEc-ccCCcccccEEEEEEEEEeC-CCCCCCCCCCC
Q psy11097 731 YFEIQPESGWIVLKKPLDVYYYIVDSPRNEGKDFFEINLQSGEVFTK-VVFDREKQGAYALEVEARDG-APSARPNSDGE 808 (817)
Q Consensus 731 ~F~Id~~tG~i~~~~~ld~~y~~~~~~~~~~~~~F~Id~~tG~l~~~-~~LDrE~~~~y~l~V~a~D~-g~p~~~~~~~~ 808 (817)
.+.|.|+ .+|.|+++ +.||||.++.|.|.|+|+|+ |.|+++++.++
T Consensus 150 -------------------------------~~~F~I~-~tG~i~~~~~~LD~E~~~~y~l~V~A~D~~G~p~~s~t~~v 197 (203)
T 3ppe_A 150 -------------------------------NEYFTVD-DSGVIFTARADLDRESQSAYEIIVKAKDALGLTGESSTATV 197 (203)
T ss_dssp -------------------------------TTTEEEC-TTSEEEESCSCCCTTTCSEEEEEEEEEETTCCCCSSSEEEE
T ss_pred -------------------------------CCcEEEe-CCeEEEECCcCCCcccCCEEEEEEEEEeCCCCCCCeEEEEE
Confidence 2478888 89999998 99999999999999999997 88999999888
Q ss_pred CCccc
Q psy11097 809 PNSAC 813 (817)
Q Consensus 809 ~v~v~ 813 (817)
+|+|.
T Consensus 198 ~I~V~ 202 (203)
T 3ppe_A 198 IIRLT 202 (203)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 88764
No 24
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=100.00 E-value=7.1e-34 Score=289.46 Aligned_cols=198 Identities=25% Similarity=0.391 Sum_probs=173.7
Q ss_pred eeEEecCCCCC--ceEEEEEEecCCCCCCceEEEEEEecC--CCCCccEEEecccceEEecccccccCCCCcEEEEEEEE
Q psy11097 578 YPKVEEGAPNG--SPVIKVHATDEDKGVNGQVKYSIVQQP--NQKGAKFTVDEETGEVVTNKVFDREGDDGKFVSVTIKA 653 (817)
Q Consensus 578 ~~~v~En~~~g--t~v~~v~A~D~D~g~n~~v~y~l~~~~--~~~~~~F~Id~~tG~i~~~~~lD~E~~~~~~~~l~V~a 653 (817)
.+.|+||.+.| +.++++.|+|+|. .++|+|.... +...++|.|++.+|.|++.++||||.. ..|.|+|+|
T Consensus 7 ~~~V~En~~~g~~~~v~~v~a~D~d~----~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~--~~y~l~v~a 80 (218)
T 3k5r_A 7 PILIPENQRQPFPRDVGKVVDSDRPE----GSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDRETI--ATYQLYVET 80 (218)
T ss_dssp CEEEETTCCSSCCEEEEECBCTTCCT----TCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTC--SEEEEEEEE
T ss_pred cEEEecCCCCCCCEEEEEEEecCCCc----eEEEEEEcCCCCCCCCCeEEEeCCceEEEECCcCCcccC--CEEEEEEEE
Confidence 56799999998 7789999998885 6899998631 222468999999999999999999998 569999999
Q ss_pred EeCCCCCceeEEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCC--CCCceEEEEEecCcCCCCCcc
Q psy11097 654 TDQGEPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDASIGTNILRVSASDEDA--DNNGAIVYTLSAPYNQMDLEY 731 (817)
Q Consensus 654 ~D~g~p~~s~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~--g~n~~i~Y~l~~~~~~~~~~~ 731 (817)
+|+|.|++++++.|+|+|.|+|||+|.|.+..|.+.|+|++++|+.|++|+|+|+|. |.|+.++|+|..+...
T Consensus 81 ~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~g~n~~i~Y~i~~~~~~----- 155 (218)
T 3k5r_A 81 TDASGKTLEGPVPLEVIVIDQNDNRPIFREGPYIGHVMEGSPTGTTVMRMTAFDADDPATDNALLRYNIRQQTPD----- 155 (218)
T ss_dssp ECSSSCEEEEEEEEEEEEECTTCCCCCCCSCSEEEEEETTCCTTCEEEECCCSCSSSSCGGGGCEEEEEEEEESC-----
T ss_pred EECCCCceeeeEEEEEEEEeCCCCCCcccCCceEEEEECCCCCCCEEEEEEEEeCCCCCCCCcEEEEEEecCCCC-----
Confidence 999999999999999999999999999999999999999999999999999999999 7899999999863110
Q ss_pred eEEeCCeeEEEEeeeceEEEEEeeCCCCCCcccEEEeCceeEEEEc---ccCCccc--ccEEEEEEEEEeCC--CCCCCC
Q psy11097 732 FEIQPESGWIVLKKPLDVYYYIVDSPRNEGKDFFEINLQSGEVFTK---VVFDREK--QGAYALEVEARDGA--PSARPN 804 (817)
Q Consensus 732 F~Id~~tG~i~~~~~ld~~y~~~~~~~~~~~~~F~Id~~tG~l~~~---~~LDrE~--~~~y~l~V~a~D~g--~p~~~~ 804 (817)
....++|.||+.||.|++. +.||||. ++.|.|.|+|+|+| .|++++
T Consensus 156 ---------------------------~~~~~~F~Id~~tG~i~~~~~~~~LD~E~~~~~~y~l~V~a~D~gg~~p~~ss 208 (218)
T 3k5r_A 156 ---------------------------KPSPNMFYIDPEKGDIVTVVSPALLDRETLENPKYELIIEAQDMAGLDVGLTG 208 (218)
T ss_dssp ---------------------------CSCSCSEEECTTTCEEEECSCGGGCCGGGCSCSEEEEEEEEEECSSTTTTCEE
T ss_pred ---------------------------CCcCCEEEEECCccEEEEeccCCCCCccccCCCeEEEEEEEEECCCCCCCeeE
Confidence 1123679999999999876 6999999 77999999999999 899999
Q ss_pred CCCCCCccc
Q psy11097 805 SDGEPNSAC 813 (817)
Q Consensus 805 ~~~~~v~v~ 813 (817)
+.+++|+|.
T Consensus 209 t~~v~I~V~ 217 (218)
T 3k5r_A 209 TATATIVID 217 (218)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEEE
Confidence 998888774
No 25
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=100.00 E-value=1e-34 Score=293.01 Aligned_cols=192 Identities=26% Similarity=0.451 Sum_probs=164.4
Q ss_pred eeEEecCCCCC--ceEEEEEEecCCCCCCceEEEEEEecCCCCCccEEEecccceEEecccccccCCCCcEEEEEEEEEe
Q psy11097 578 YPKVEEGAPNG--SPVIKVHATDEDKGVNGQVKYSIVQQPNQKGAKFTVDEETGEVVTNKVFDREGDDGKFVSVTIKATD 655 (817)
Q Consensus 578 ~~~v~En~~~g--t~v~~v~A~D~D~g~n~~v~y~l~~~~~~~~~~F~Id~~tG~i~~~~~lD~E~~~~~~~~l~V~a~D 655 (817)
.+.|.||.+.+ +.|+++ |+|+|.| |+.++|+|.++. ...+|.|++.+|.|++.++||||.. ..|.|+|+|+|
T Consensus 6 ~~~v~En~~~~~~~~v~~~-a~D~D~g-~~~i~Y~l~~~~--~~~~F~Id~~tG~i~~~~~LDrE~~--~~y~l~v~a~D 79 (207)
T 3lnd_A 6 QFFLLEEYTGSDYQYVGKL-HSDQDRG-DGSLKYILSGDG--AGDLFIINENTGDIQATKRLDREEK--PVYILRAQAVN 79 (207)
T ss_dssp CEEEESCBCSSSCEEEEEC-CCTTCCS-STTBCCCCCSSS--BTTTEEECTTTCEEEECSCCCGGGC--CEEEC----CB
T ss_pred ccEEEeecCCCCCEEEEEE-EeCCCCC-CceEEEEEECCC--CCCeEEEECCceEEEECCCcCcccC--CEEEEEEEEEE
Confidence 45699999865 478888 9999999 678999997542 2348999999999999999999998 56999999999
Q ss_pred CC-CCCceeEEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCC---CCCceEEEEEecCcCCCCCcc
Q psy11097 656 QG-EPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDASIGTNILRVSASDEDA---DNNGAIVYTLSAPYNQMDLEY 731 (817)
Q Consensus 656 ~g-~p~~s~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~---g~n~~i~Y~l~~~~~~~~~~~ 731 (817)
+| .|++++++.|+|+|.|+|||+|.|.+..|.+.|+|++++|+.|++|+|+|+|. |.|+.++|+|..+
T Consensus 80 ~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~i~Y~i~~~-------- 151 (207)
T 3lnd_A 80 RRTGRPVEPESEFIIKIHDINDNEPIFTKDVYTATVPEMADVGTFVVQVTATDADDPTYGNSAKVVYSILQG-------- 151 (207)
T ss_dssp SSSCCCCSCCCCCEEEEECCSCCCCEESCSEEEEEEESSCCTTCEEEECCEECSSCTTSSSTTCCEEEEEES--------
T ss_pred CCCCCccccEEEEEEEECccCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCCCcEEEEEEcCC--------
Confidence 87 57788999999999999999999999999999999999999999999999998 8899999999763
Q ss_pred eEEeCCeeEEEEeeeceEEEEEeeCCCCCCcccEEEeCceeEEEEc-ccCCcccccEEEEEEEEEeCCCC--CCCCCCCC
Q psy11097 732 FEIQPESGWIVLKKPLDVYYYIVDSPRNEGKDFFEINLQSGEVFTK-VVFDREKQGAYALEVEARDGAPS--ARPNSDGE 808 (817)
Q Consensus 732 F~Id~~tG~i~~~~~ld~~y~~~~~~~~~~~~~F~Id~~tG~l~~~-~~LDrE~~~~y~l~V~a~D~g~p--~~~~~~~~ 808 (817)
...|.|++.+|.|+++ +.||||.+..|.|.|+|+|+|.| +++++.++
T Consensus 152 ------------------------------~~~F~Id~~tG~i~~~~~~lD~E~~~~y~l~V~A~D~g~~~~~~s~t~~v 201 (207)
T 3lnd_A 152 ------------------------------QPYFSVESETGIIKTALLNMDRENREQYQVVIQAKDMGGQMGGLSGTTTV 201 (207)
T ss_dssp ------------------------------GGGEEECTTTCEEEECCSSCCC--CCEEEEEEEEESGGGCTTCBEEEEEE
T ss_pred ------------------------------CCCEEEcCCCcEEEECcccCCcccCCEEEEEEEEEECCCCCCCcEeEEEE
Confidence 2478888889999988 89999999999999999998866 78888888
Q ss_pred CCccc
Q psy11097 809 PNSAC 813 (817)
Q Consensus 809 ~v~v~ 813 (817)
+|+|.
T Consensus 202 ~I~V~ 206 (207)
T 3lnd_A 202 NITLT 206 (207)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 87763
No 26
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=100.00 E-value=1.5e-32 Score=278.34 Aligned_cols=196 Identities=28% Similarity=0.380 Sum_probs=171.2
Q ss_pred EEEEeccCCCCceEEEEEeecCCCCcc--EEEEEEecC----CCCceEEEcceeEEEeccCCCcccccEEEEEEEEEecC
Q psy11097 111 QAVVQLNAPPNTPVFTLQARDPDSDHN--IHYFIVRDR----TGGRFEVDERSGVVRTRGTDPFQLDQEYVLYVKAEDQN 184 (817)
Q Consensus 111 ~~~v~E~~~~gt~v~~v~A~D~D~g~~--~~y~l~~~~----~~~~F~Id~~tG~i~~~~~ld~e~~~~y~l~v~a~D~~ 184 (817)
.++|+||++ |+.+++|.|.|.|.|.| ++|+|.++. ..+.|+|++.+|.|+++++||||....|.|+|+|+|.+
T Consensus 6 ~~~V~En~~-g~~~~~v~~~~~D~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~g 84 (215)
T 2qvi_A 6 PINLPENSR-GPFPQELVRIRSDRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAVDIN 84 (215)
T ss_dssp CEEEESSCC-CCSSEEEEECCCGGGGTSCEEEEEESTTSSSTTCSSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETT
T ss_pred cEEEcCCCC-CCCCEEEEEEeCCCCCCceEEEEEECCCCCCCCCCcEEEeCCccEEEECcccCcccCCeEEEEEEEEECC
Confidence 456999998 99999999999888765 999998653 24789999999999999999999999999999999976
Q ss_pred CcccccccccCccEEEEEeCCCCCCeeeccceEEEecccccCCCCCCcceEEEEEEEEEeeCCCCCCcCcCceeeEEEeC
Q psy11097 185 GRKDERKFQSTPEERLSIVGGKRAPQFYMPSYEAEIPENQKKDTEYPSMTGTATVRIYTKNKNDEEPKFSQQVYTPNVDE 264 (817)
Q Consensus 185 g~~~~~~~~~~~~~~~~i~~~~~~p~f~~~~y~~~i~e~~~~d~~~p~~s~~~~v~I~V~DvNDn~P~f~~~~y~~~V~E 264 (817)
+ |++++++.|+|+|.|+|||+|.|.+..|.++|+|
T Consensus 85 ~---------------------------------------------~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E 119 (215)
T 2qvi_A 85 G---------------------------------------------NQVENPIDIVINVIDMNDNRPEFLHQVWNGSVPE 119 (215)
T ss_dssp T---------------------------------------------CCCEEEEEEEEEEECCCCCCCBCSSSEEEEEECS
T ss_pred C---------------------------------------------CceeeeEEEEEEEeECCCCCCcccCceeEEEEeC
Confidence 4 4578899999999999999999999999999999
Q ss_pred CCCCCcEEEEEEEEeCCCCCceeEEEeecccCCccEEEEEEeCCC---CCCCeEEeCceeEEEeC-ccCCccccCCCeEE
Q psy11097 265 NAGPNTLVTTVVASDKDGDNVSIISVKAKSFADREIRYTLKAQGQ---GAGTFNIGPTSGIVKLA-KELDFEDLRQPHVY 340 (817)
Q Consensus 265 n~~~gt~v~~v~A~D~D~~~~~i~~~~~~~~~~~~i~y~l~~~g~---~~~~F~Id~~tG~i~~~-~~LD~E~~~~~~~y 340 (817)
|+++|+.|++|.|+|+|.+.. .|+.++|+|..+.. ..+.|.|++.+|.|++. ++||||.. ..|
T Consensus 120 n~~~gt~v~~v~A~D~D~~~g----------~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~---~~y 186 (215)
T 2qvi_A 120 GSKPGTYVMTVTAIDADDPNA----------LNGMLRYRILSQAPSTPSPNMFTINNETGDIITVAAGLDREKV---QQY 186 (215)
T ss_dssp SCCTTCEEEECCCBCSSCTTS----------TTTCCCCEEEECSSCCSSTTCEEECTTTCEEEECSCCCCTTTC---SEE
T ss_pred CCCCCCEEEEEEEEeCCCCCC----------CCcEEEEEEecCCCCCCcCCeEEEcCCCcEEEEecCCCCcccC---CeE
Confidence 999999999999999997310 46889999985322 46899999999999996 89999984 789
Q ss_pred EEEEEEEeCCC----CceEEEEEEEEEEe
Q psy11097 341 SLIVTATEDSG----GFSTSVELTIRVTD 365 (817)
Q Consensus 341 ~l~V~a~d~~g----~~~~~~~v~I~V~D 365 (817)
.|.|+|+|.++ +++++++|+|+|+|
T Consensus 187 ~l~V~a~D~g~~p~~~ls~t~~v~I~V~D 215 (215)
T 2qvi_A 187 TLIIQATDMEGNPTYGLSNTATAVITVTD 215 (215)
T ss_dssp EEEEECCTTTTCTTTSCCCEEEEEEEECC
T ss_pred EEEEEEEECCCCCCCCcceEEEEEEEEEC
Confidence 99999996544 47899999999986
No 27
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=100.00 E-value=6.7e-32 Score=271.25 Aligned_cols=193 Identities=25% Similarity=0.342 Sum_probs=170.6
Q ss_pred EEEEeccCCCC--ceEEEEEeecCCCCccEEEEEEecCCCCceEEEcceeEEEeccCCCcccccEEEEEEEEEecCCccc
Q psy11097 111 QAVVQLNAPPN--TPVFTLQARDPDSDHNIHYFIVRDRTGGRFEVDERSGVVRTRGTDPFQLDQEYVLYVKAEDQNGRKD 188 (817)
Q Consensus 111 ~~~v~E~~~~g--t~v~~v~A~D~D~g~~~~y~l~~~~~~~~F~Id~~tG~i~~~~~ld~e~~~~y~l~v~a~D~~g~~~ 188 (817)
+++|+||.+.| +.|+++. +|+|.|.+ +|+|.+++..++|.|++.||+|+++++||||....|.|+|+|+|+++.
T Consensus 6 ~~~V~En~~~~~~~~v~~v~-~D~D~g~~-~Y~i~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~g~~-- 81 (203)
T 3ppe_A 6 RMHIREEIDSPLPHHVGKLT-SSVGNKNA-MYIIEGESANTIFKVQGYDGDIYAFERLDREKKAEYELTAHIIDRRNN-- 81 (203)
T ss_dssp EEEEETTCCSSSCEEEEECC-BCCCCTTE-EEEEEETTBTTTEEEETTTTEEEESSCCCTTTCCEEEEEEEEEETTTT--
T ss_pred cEEEEccCCCCCCEEEEEEE-ecCCCCCc-EEEEecCCCCCeEEEECCcCEEEECccccccccceEEEEEEEEECCCC--
Confidence 56799999998 7888888 99999998 999998877789999999999999999999999999999999997642
Q ss_pred ccccccCccEEEEEeCCCCCCeeeccceEEEecccccCCCCCCcceEEEEEEEEEeeCCCCCCcCcCceeeEEEeCCCCC
Q psy11097 189 ERKFQSTPEERLSIVGGKRAPQFYMPSYEAEIPENQKKDTEYPSMTGTATVRIYTKNKNDEEPKFSQQVYTPNVDENAGP 268 (817)
Q Consensus 189 ~~~~~~~~~~~~~i~~~~~~p~f~~~~y~~~i~e~~~~d~~~p~~s~~~~v~I~V~DvNDn~P~f~~~~y~~~V~En~~~ 268 (817)
+++++++.|+|.|.|+|||+|.|.+..|.++|+|++++
T Consensus 82 ------------------------------------------~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~ 119 (203)
T 3ppe_A 82 ------------------------------------------RSLEPPSKFIIKVSDINDNAPIFVQKIFNGSVPEMSRL 119 (203)
T ss_dssp ------------------------------------------EECSCCEEEEEEEECCCCCCCEESCSEEEEEEETTCCT
T ss_pred ------------------------------------------CcccceEEEEEEEcCCCCCCCCccCCccEEEEeccCCC
Confidence 13577889999999999999999999999999999999
Q ss_pred CcEEEEEEEEeCCCCCceeEEEeecccCCccEEEEEEeCCCCCCCeEEeCceeEEEeC-ccCCccccCCCeEEEEEEEEE
Q psy11097 269 NTLVTTVVASDKDGDNVSIISVKAKSFADREIRYTLKAQGQGAGTFNIGPTSGIVKLA-KELDFEDLRQPHVYSLIVTAT 347 (817)
Q Consensus 269 gt~v~~v~A~D~D~~~~~i~~~~~~~~~~~~i~y~l~~~g~~~~~F~Id~~tG~i~~~-~~LD~E~~~~~~~y~l~V~a~ 347 (817)
|+.|++|.|+|+|.+..+ .|+.++|+|.. + ...|.|+ .+|.|++. ++||||.. ..|.|.|+|+
T Consensus 120 gt~v~~v~A~D~D~~~~g---------~n~~i~Y~i~~-~--~~~F~I~-~tG~i~~~~~~LD~E~~---~~y~l~V~A~ 183 (203)
T 3ppe_A 120 GTSVTKVTAEDADDPTVA---------GHATVTYQIIK-G--NEYFTVD-DSGVIFTARADLDRESQ---SAYEIIVKAK 183 (203)
T ss_dssp TCEEEECCEECCSCTTSS---------STTCEEEEEEE-S--TTTEEEC-TTSEEEESCSCCCTTTC---SEEEEEEEEE
T ss_pred CcEEEEEEEEcCCCcCCC---------CceEEEEEEeC-C--CCcEEEe-CCeEEEECCcCCCcccC---CEEEEEEEEE
Confidence 999999999999952111 36789999984 2 3599999 99999999 99999984 7899999999
Q ss_pred eCCC--CceEEEEEEEEEEe
Q psy11097 348 EDSG--GFSTSVELTIRVTD 365 (817)
Q Consensus 348 d~~g--~~~~~~~v~I~V~D 365 (817)
|.+| ++++++.|+|+|+|
T Consensus 184 D~~G~p~~s~t~~v~I~V~D 203 (203)
T 3ppe_A 184 DALGLTGESSTATVIIRLTD 203 (203)
T ss_dssp ETTCCCCSSSEEEEEEEEEC
T ss_pred eCCCCCCCeEEEEEEEEEEC
Confidence 7534 37899999999987
No 28
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=100.00 E-value=4.4e-32 Score=275.21 Aligned_cols=197 Identities=26% Similarity=0.427 Sum_probs=171.0
Q ss_pred EEEEeccCC--CCceEEEEEeecCCCCccEEEEEEecC----CCCceEEEcceeEEEeccCCCcccccEEEEEEEEEecC
Q psy11097 111 QAVVQLNAP--PNTPVFTLQARDPDSDHNIHYFIVRDR----TGGRFEVDERSGVVRTRGTDPFQLDQEYVLYVKAEDQN 184 (817)
Q Consensus 111 ~~~v~E~~~--~gt~v~~v~A~D~D~g~~~~y~l~~~~----~~~~F~Id~~tG~i~~~~~ld~e~~~~y~l~v~a~D~~ 184 (817)
.++|+||++ .|+.|+++.| |+|.+..++|+|.++. ..++|.|++.+|+|+++++||||....|.|+|+|+|.+
T Consensus 6 ~~~V~En~~~~~~~~v~~v~a-D~d~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~ 84 (213)
T 3qrb_A 6 AISCPENEKGEFPKNLVQIKS-NRDKETKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREAIAKYILYSHAVSSN 84 (213)
T ss_dssp EEEEETTCCSSSSEEEEECCC-GGGGTSCEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETT
T ss_pred CEEEeCCCCCCCCcEEEEEEE-CCCCCceEEEEEEcCCCCCCCCCeEEEECCCCEEEECCccCcccCceEEEEEEEEeCC
Confidence 566999998 6788999999 9988777999998743 34599999999999999999999999999999999976
Q ss_pred CcccccccccCccEEEEEeCCCCCCeeeccceEEEecccccCCCCCCcceEEEEEEEEEeeCCCCCCcCcCceeeEEEeC
Q psy11097 185 GRKDERKFQSTPEERLSIVGGKRAPQFYMPSYEAEIPENQKKDTEYPSMTGTATVRIYTKNKNDEEPKFSQQVYTPNVDE 264 (817)
Q Consensus 185 g~~~~~~~~~~~~~~~~i~~~~~~p~f~~~~y~~~i~e~~~~d~~~p~~s~~~~v~I~V~DvNDn~P~f~~~~y~~~V~E 264 (817)
+ |++++++.|+|+|.|+|||+|.|.+..|.++|+|
T Consensus 85 ~---------------------------------------------~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E 119 (213)
T 3qrb_A 85 G---------------------------------------------EAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAE 119 (213)
T ss_dssp S---------------------------------------------CBCSCCEEEEEEEECCSCCCCEESCSEEEEEEET
T ss_pred C---------------------------------------------CcccceEEEEEEEEEccCCCCccCCCceEEEEEC
Confidence 5 3456788999999999999999999999999999
Q ss_pred CCCCCcEEEEEEEEeCCCCCceeEEEeecccCCccEEEEEEeCC---CCCCCeEEeCceeEEEeC-ccCCccccCCCeEE
Q psy11097 265 NAGPNTLVTTVVASDKDGDNVSIISVKAKSFADREIRYTLKAQG---QGAGTFNIGPTSGIVKLA-KELDFEDLRQPHVY 340 (817)
Q Consensus 265 n~~~gt~v~~v~A~D~D~~~~~i~~~~~~~~~~~~i~y~l~~~g---~~~~~F~Id~~tG~i~~~-~~LD~E~~~~~~~y 340 (817)
++++|+.|++|.|+|+|.+..+ .|+.++|+|.... ...+.|.|++.+|.|++. ++||||.. ..|
T Consensus 120 n~~~gt~v~~v~A~D~D~~~~~---------~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~---~~y 187 (213)
T 3qrb_A 120 GAVPGTSVMKVSATDADDDVNT---------YNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTSGLDRESY---PTY 187 (213)
T ss_dssp TCCTTCEEEECCEECCSCTTTS---------STTCCEEEEEEEESCCSCSCSEEECTTTCEEEECSSCCCTTTC---CEE
T ss_pred CCCCCcEEEEEEEEeCCCCCCC---------cCcEEEEEEccCCCCCCcCCeEEEECCCcEEEEccCCCCCccC---ceE
Confidence 9999999999999999987211 2678999997432 145789999999999997 89999984 789
Q ss_pred EEEEEEEeCCC-CceEEEEEEEEEEe
Q psy11097 341 SLIVTATEDSG-GFSTSVELTIRVTD 365 (817)
Q Consensus 341 ~l~V~a~d~~g-~~~~~~~v~I~V~D 365 (817)
.|.|+|+|.++ ++++++.|+|+|+|
T Consensus 188 ~l~V~A~D~g~~~~s~t~~v~I~V~D 213 (213)
T 3qrb_A 188 TLVVQAADLQGEGLSTTAKAVITVKD 213 (213)
T ss_dssp EEEEEEETGGGTSCEEEEEEEEEEEC
T ss_pred EEEEEEEeCCCCCceEEEEEEEEEEC
Confidence 99999996432 68999999999987
No 29
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=100.00 E-value=6.9e-32 Score=274.78 Aligned_cols=197 Identities=24% Similarity=0.379 Sum_probs=170.0
Q ss_pred EEEEeccCCCC--ceEEEEEeecCCCCccEEEEEEecC----CCCceEEEcceeEEEeccCCCcccccEEEEEEEEEecC
Q psy11097 111 QAVVQLNAPPN--TPVFTLQARDPDSDHNIHYFIVRDR----TGGRFEVDERSGVVRTRGTDPFQLDQEYVLYVKAEDQN 184 (817)
Q Consensus 111 ~~~v~E~~~~g--t~v~~v~A~D~D~g~~~~y~l~~~~----~~~~F~Id~~tG~i~~~~~ld~e~~~~y~l~v~a~D~~ 184 (817)
+++|+||+++| +.|+++.|+|+|. .++|+|.+.. ..++|.|++.+|+|+++++||||....|.|+|+|+|.+
T Consensus 7 ~~~V~En~~~g~~~~v~~v~a~D~d~--~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~g 84 (218)
T 3k5r_A 7 PILIPENQRQPFPRDVGKVVDSDRPE--GSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDRETIATYQLYVETTDAS 84 (218)
T ss_dssp CEEEETTCCSSCCEEEEECBCTTCCT--TCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEECSS
T ss_pred cEEEecCCCCCCCEEEEEEEecCCCc--eEEEEEEcCCCCCCCCCeEEEeCCceEEEECCcCCcccCCEEEEEEEEEECC
Confidence 45699999999 7789999998886 7999998643 34899999999999999999999999999999999965
Q ss_pred CcccccccccCccEEEEEeCCCCCCeeeccceEEEecccccCCCCCCcceEEEEEEEEEeeCCCCCCcCcCceeeEEEeC
Q psy11097 185 GRKDERKFQSTPEERLSIVGGKRAPQFYMPSYEAEIPENQKKDTEYPSMTGTATVRIYTKNKNDEEPKFSQQVYTPNVDE 264 (817)
Q Consensus 185 g~~~~~~~~~~~~~~~~i~~~~~~p~f~~~~y~~~i~e~~~~d~~~p~~s~~~~v~I~V~DvNDn~P~f~~~~y~~~V~E 264 (817)
+ |++++++.|+|+|.|+|||+|.|.+..|.++|+|
T Consensus 85 ~---------------------------------------------~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E 119 (218)
T 3k5r_A 85 G---------------------------------------------KTLEGPVPLEVIVIDQNDNRPIFREGPYIGHVME 119 (218)
T ss_dssp S---------------------------------------------CEEEEEEEEEEEEECTTCCCCCCCSCSEEEEEET
T ss_pred C---------------------------------------------CceeeeEEEEEEEEeCCCCCCcccCCceEEEEEC
Confidence 4 3568899999999999999999999999999999
Q ss_pred CCCCCcEEEEEEEEeCCCCCceeEEEeecccCCccEEEEEEeCCCC---CCCeEEeCceeEEEeC---ccCCccccCCCe
Q psy11097 265 NAGPNTLVTTVVASDKDGDNVSIISVKAKSFADREIRYTLKAQGQG---AGTFNIGPTSGIVKLA---KELDFEDLRQPH 338 (817)
Q Consensus 265 n~~~gt~v~~v~A~D~D~~~~~i~~~~~~~~~~~~i~y~l~~~g~~---~~~F~Id~~tG~i~~~---~~LD~E~~~~~~ 338 (817)
++++|+.|++|.|+|+|.+.. .|+.++|+|...... .+.|.|++.+|.|++. ++||||... +.
T Consensus 120 ~~~~gt~v~~v~A~D~D~~~g----------~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~~~~LD~E~~~-~~ 188 (218)
T 3k5r_A 120 GSPTGTTVMRMTAFDADDPAT----------DNALLRYNIRQQTPDKPSPNMFYIDPEKGDIVTVVSPALLDRETLE-NP 188 (218)
T ss_dssp TCCTTCEEEECCCSCSSSSCG----------GGGCEEEEEEEEESCCSCSCSEEECTTTCEEEECSCGGGCCGGGCS-CS
T ss_pred CCCCCCEEEEEEEEeCCCCCC----------CCcEEEEEEecCCCCCCcCCEEEEECCccEEEEeccCCCCCccccC-CC
Confidence 999999999999999998310 368899999853322 3789999999999987 699999831 25
Q ss_pred EEEEEEEEEeCCC---CceEEEEEEEEEEe
Q psy11097 339 VYSLIVTATEDSG---GFSTSVELTIRVTD 365 (817)
Q Consensus 339 ~y~l~V~a~d~~g---~~~~~~~v~I~V~D 365 (817)
.|.|.|+|+|.+| +++++++|+|+|+|
T Consensus 189 ~y~l~V~a~D~gg~~p~~sst~~v~I~V~D 218 (218)
T 3k5r_A 189 KYELIIEAQDMAGLDVGLTGTATATIVIDD 218 (218)
T ss_dssp EEEEEEEEEECSSTTTTCEEEEEEEEEEEC
T ss_pred eEEEEEEEEECCCCCCCeeEEEEEEEEEEC
Confidence 8999999996442 68999999999987
No 30
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=99.98 E-value=2.3e-32 Score=275.81 Aligned_cols=195 Identities=25% Similarity=0.393 Sum_probs=163.1
Q ss_pred EEEEeccCCCCc--eEEEEEeecCCCCcc-EEEEEEecCCCCceEEEcceeEEEeccCCCcccccEEEEEEEEEecCCcc
Q psy11097 111 QAVVQLNAPPNT--PVFTLQARDPDSDHN-IHYFIVRDRTGGRFEVDERSGVVRTRGTDPFQLDQEYVLYVKAEDQNGRK 187 (817)
Q Consensus 111 ~~~v~E~~~~gt--~v~~v~A~D~D~g~~-~~y~l~~~~~~~~F~Id~~tG~i~~~~~ld~e~~~~y~l~v~a~D~~g~~ 187 (817)
+.+|+||.++|. .|+++ |+|+|.|.+ ++|+|.+++..++|.|++.+|+|+++++||||....|.|+|+|+|+++.
T Consensus 6 ~~~v~En~~~~~~~~v~~~-a~D~D~g~~~i~Y~l~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a~D~~~~- 83 (207)
T 3lnd_A 6 QFFLLEEYTGSDYQYVGKL-HSDQDRGDGSLKYILSGDGAGDLFIINENTGDIQATKRLDREEKPVYILRAQAVNRRTG- 83 (207)
T ss_dssp CEEEESCBCSSSCEEEEEC-CCTTCCSSTTBCCCCCSSSBTTTEEECTTTCEEEECSCCCGGGCCEEEC----CBSSSC-
T ss_pred ccEEEeecCCCCCEEEEEE-EeCCCCCCceEEEEEECCCCCCeEEEECCceEEEECCCcCcccCCEEEEEEEEEECCCC-
Confidence 456999998664 77888 999999854 8999987666679999999999999999999999999999999997631
Q ss_pred cccccccCccEEEEEeCCCCCCeeeccceEEEecccccCCCCCCcceEEEEEEEEEeeCCCCCCcCcCceeeEEEeCCCC
Q psy11097 188 DERKFQSTPEERLSIVGGKRAPQFYMPSYEAEIPENQKKDTEYPSMTGTATVRIYTKNKNDEEPKFSQQVYTPNVDENAG 267 (817)
Q Consensus 188 ~~~~~~~~~~~~~~i~~~~~~p~f~~~~y~~~i~e~~~~d~~~p~~s~~~~v~I~V~DvNDn~P~f~~~~y~~~V~En~~ 267 (817)
|++++++.|+|+|.|+|||+|.|.+..|.++|+|+++
T Consensus 84 -------------------------------------------~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~ 120 (207)
T 3lnd_A 84 -------------------------------------------RPVEPESEFIIKIHDINDNEPIFTKDVYTATVPEMAD 120 (207)
T ss_dssp -------------------------------------------CCCSCCCCCEEEEECCSCCCCEESCSEEEEEEESSCC
T ss_pred -------------------------------------------CccccEEEEEEEECccCCCCCccCCCceEEEEeCCCC
Confidence 3456778899999999999999999999999999999
Q ss_pred CCcEEEEEEEEeCCCCCceeEEEeecccCCccEEEEEEeCCCCCCCeEEeCceeEEEeC-ccCCccccCCCeEEEEEEEE
Q psy11097 268 PNTLVTTVVASDKDGDNVSIISVKAKSFADREIRYTLKAQGQGAGTFNIGPTSGIVKLA-KELDFEDLRQPHVYSLIVTA 346 (817)
Q Consensus 268 ~gt~v~~v~A~D~D~~~~~i~~~~~~~~~~~~i~y~l~~~g~~~~~F~Id~~tG~i~~~-~~LD~E~~~~~~~y~l~V~a 346 (817)
+|+.|+++.|+|+|.+..+ .|+.++|+|.. + ...|.|++.+|.|++. ++||||.. ..|.|.|+|
T Consensus 121 ~gt~v~~v~A~D~D~~~~g---------~n~~i~Y~i~~-~--~~~F~Id~~tG~i~~~~~~lD~E~~---~~y~l~V~A 185 (207)
T 3lnd_A 121 VGTFVVQVTATDADDPTYG---------NSAKVVYSILQ-G--QPYFSVESETGIIKTALLNMDRENR---EQYQVVIQA 185 (207)
T ss_dssp TTCEEEECCEECSSCTTSS---------STTCCEEEEEE-S--GGGEEECTTTCEEEECCSSCCC--C---CEEEEEEEE
T ss_pred CCCEEEEEEEEeCCCCCCC---------CCcEEEEEEcC-C--CCCEEEcCCCcEEEECcccCCcccC---CEEEEEEEE
Confidence 9999999999999973111 36789999974 2 4599999999999999 99999984 789999999
Q ss_pred EeCCC---CceEEEEEEEEEEe
Q psy11097 347 TEDSG---GFSTSVELTIRVTD 365 (817)
Q Consensus 347 ~d~~g---~~~~~~~v~I~V~D 365 (817)
+|.++ +++++++|+|+|+|
T Consensus 186 ~D~g~~~~~~s~t~~v~I~V~D 207 (207)
T 3lnd_A 186 KDMGGQMGGLSGTTTVNITLTD 207 (207)
T ss_dssp ESGGGCTTCBEEEEEEEEEEEC
T ss_pred EECCCCCCCcEeEEEEEEEEeC
Confidence 96432 68999999999987
No 31
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*
Probab=99.97 E-value=8.7e-31 Score=269.07 Aligned_cols=203 Identities=21% Similarity=0.299 Sum_probs=164.2
Q ss_pred CCceeEEecCCCCCceEEEE-EEecCCCCCCceEEEEEEecCCCCCccEEEecccceEEec---ccccccCCCC-cEEEE
Q psy11097 575 STYYPKVEEGAPNGSPVIKV-HATDEDKGVNGQVKYSIVQQPNQKGAKFTVDEETGEVVTN---KVFDREGDDG-KFVSV 649 (817)
Q Consensus 575 ~~~~~~v~En~~~gt~v~~v-~A~D~D~g~n~~v~y~l~~~~~~~~~~F~Id~~tG~i~~~---~~lD~E~~~~-~~~~l 649 (817)
+.+...|.|+++.|+.|+.+ .+.|.|.|.|+.++|+|.... ..+|.|++.+|.+.+. +.||||.... ..+.+
T Consensus 20 P~~~vsV~E~sp~GTvv~~~~~~~~~d~~~n~~i~ysl~~~~---~~~f~id~~tg~~~l~~t~~~LDrE~~~~~~~~~~ 96 (242)
T 4apx_B 20 PATIVAIDEESRNGTILVDNMLIKGTAGGPDPTIELSLKDNV---DYWVLLDPVKQMLFLNSTGRVLDRDPPMNIHSIVV 96 (242)
T ss_dssp SSEEEEEETTCCTTCEEESCCCBSSCBSSSSCSEEEEEESCG---GGCEEEETTTTEEEECCTTSCCCCSTTTCCCEEEE
T ss_pred CeEEEEeeCCCCCCCEEEEEEEecCCCCCCCCEEEEEEecCC---CceEEECCCCCEEEEEecCCceeccCCCceEEEEE
Confidence 35678899999999998764 455566788999999997542 3489999999999864 6799998743 23455
Q ss_pred EEEEEeCCCCCceeEEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCcEEEE-----EEEEeCCCCCCceEEEEEecCc
Q psy11097 650 TIKATDQGEPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDASIGTNILR-----VSASDEDADNNGAIVYTLSAPY 724 (817)
Q Consensus 650 ~V~a~D~g~p~~s~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~g~~v~~-----v~A~D~D~g~n~~i~Y~l~~~~ 724 (817)
.+.|.|.+ ++..+.+.|+|.|.|+|||+|+|.+..|.+.|+|++++|+.|++ |+|+|+|.|.||.++|+|..+.
T Consensus 97 ~v~~~~~~-~~~~~~~~V~I~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~~~~~~v~A~D~D~g~N~~v~Ysi~~~~ 175 (242)
T 4apx_B 97 QVQCVNKK-VGTVIYHEVRIVVRDRNDNSPTFKHESYYATVNELTPVGTTIFTGFSGDNGATDIDDGPNGQIEYVIQYNP 175 (242)
T ss_dssp EEEEEETT-TCCEEEEEEEEEEECCCCCCCEESSSCEEEEEETTCCTTCEEECTTTTTTSEECCSSGGGGCEEEEEECCT
T ss_pred EEEeECCC-CCeEEEEEEEEEEEeCCCCCCcccceeeeeEeeeccCCCCEEEEeeecccccccCCCCcCCceEEEEecCC
Confidence 56666653 34567788999999999999999999999999999999999976 7899999999999999998742
Q ss_pred CCCCCcceEEeCCeeEEEEeeeceEEEEEeeCCCCCCcccEEEeC-ceeEEEEcccCCcccccEEEEEEEEEeCCCCC--
Q psy11097 725 NQMDLEYFEIQPESGWIVLKKPLDVYYYIVDSPRNEGKDFFEINL-QSGEVFTKVVFDREKQGAYALEVEARDGAPSA-- 801 (817)
Q Consensus 725 ~~~~~~~F~Id~~tG~i~~~~~ld~~y~~~~~~~~~~~~~F~Id~-~tG~l~~~~~LDrE~~~~y~l~V~a~D~g~p~-- 801 (817)
.. ....+.|.||+ .||.|++++.||||++..|.|.|+|+|+|.|+
T Consensus 176 ~~--------------------------------~~~~~~F~Id~~~tG~i~~~~~LD~E~~~~y~l~V~A~D~G~~~~~ 223 (242)
T 4apx_B 176 ED--------------------------------PTSNDTFEIPLMLTGNVVLRKRLNYEDKTRYYVIIQANDRAQNLNE 223 (242)
T ss_dssp TS--------------------------------TTHHHHEECSSTTTCCEEECSCCCTTTCCEEEEEEEEEECCSSGGG
T ss_pred CC--------------------------------cccccceEEcCCCceEEEECCcCChhhCCEEEEEEEEEECCcCchh
Confidence 11 11245789985 58999999999999999999999999988875
Q ss_pred -CCCCCCCCCccc
Q psy11097 802 -RPNSDGEPNSAC 813 (817)
Q Consensus 802 -~~~~~~~~v~v~ 813 (817)
++++.+++|+|.
T Consensus 224 ~~~~~~~vtVnVe 236 (242)
T 4apx_B 224 RRTTTTTLTVDLE 236 (242)
T ss_dssp CCEEEEEEEEEEE
T ss_pred cccCCceEEEEEe
Confidence 555667777663
No 32
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*
Probab=99.95 E-value=3.3e-27 Score=242.42 Aligned_cols=180 Identities=26% Similarity=0.364 Sum_probs=153.8
Q ss_pred eeeEEEeCCCCCCcEEEEEEEEeCC-CCCceeEEEeecccCCccEEEEEEeCCCCCCCeEEeCceeEEEeC---ccCCcc
Q psy11097 257 VYTPNVDENAGPNTLVTTVVASDKD-GDNVSIISVKAKSFADREIRYTLKAQGQGAGTFNIGPTSGIVKLA---KELDFE 332 (817)
Q Consensus 257 ~y~~~V~En~~~gt~v~~v~A~D~D-~~~~~i~~~~~~~~~~~~i~y~l~~~g~~~~~F~Id~~tG~i~~~---~~LD~E 332 (817)
.|.++|+|++|+|+.|+.+.+.|.+ .+ .++.++|+|. +....+|.|++.+|.+.+. +.||||
T Consensus 21 ~~~vsV~E~sp~GTvv~~~~~~~~~d~~------------~n~~i~ysl~--~~~~~~f~id~~tg~~~l~~t~~~LDrE 86 (242)
T 4apx_B 21 ATIVAIDEESRNGTILVDNMLIKGTAGG------------PDPTIELSLK--DNVDYWVLLDPVKQMLFLNSTGRVLDRD 86 (242)
T ss_dssp SEEEEEETTCCTTCEEESCCCBSSCBSS------------SSCSEEEEEE--SCGGGCEEEETTTTEEEECCTTSCCCCS
T ss_pred eEEEEeeCCCCCCCEEEEEEEecCCCCC------------CCCEEEEEEe--cCCCceEEECCCCCEEEEEecCCceecc
Confidence 4678999999999999876666555 44 4678999997 5566789999999999875 679999
Q ss_pred ccCCCeEEEEEEEEEeCCCCceEEEEEEEEEEeeCCCCCcccCCCcceEEeeCCCCCCcEEEE-----EEEEeCCCCCCc
Q psy11097 333 DLRQPHVYSLIVTATEDSGGFSTSVELTIRVTDVNDNAPKFELPDYQAHNIDEDITTGTSILK-----VKATDADSGTNA 407 (817)
Q Consensus 333 ~~~~~~~y~l~V~a~d~~g~~~~~~~v~I~V~DvNDn~P~f~~~~y~~~~V~E~~~~Gt~v~~-----v~A~D~D~g~n~ 407 (817)
.......+.+.+.|.+...+..+.+.|+|.|+|+|||+|+|.+..|.. .|+|++++|+.|++ +.|+|+|.|.|+
T Consensus 87 ~~~~~~~~~~~v~~~~~~~~~~~~~~V~I~V~DvNDn~P~F~~~~y~~-~v~En~~~Gt~v~~~~~~~v~A~D~D~g~N~ 165 (242)
T 4apx_B 87 PPMNIHSIVVQVQCVNKKVGTVIYHEVRIVVRDRNDNSPTFKHESYYA-TVNELTPVGTTIFTGFSGDNGATDIDDGPNG 165 (242)
T ss_dssp TTTCCCEEEEEEEEEETTTCCEEEEEEEEEEECCCCCCCEESSSCEEE-EEETTCCTTCEEECTTTTTTSEECCSSGGGG
T ss_pred CCCceEEEEEEEEeECCCCCeEEEEEEEEEEEeCCCCCCcccceeeee-EeeeccCCCCEEEEeeecccccccCCCCcCC
Confidence 865445667777777644467778899999999999999999999987 89999999999986 789999999999
Q ss_pred eEEEEEecC--------ceEEcc--ceeEEEeeecccCCCCcEEEEEEEEecCCc
Q psy11097 408 EIEYHVSDD--------NFAVDS--NGVINNHKTLDADNNNAYYEFVITAKDKDV 452 (817)
Q Consensus 408 ~i~y~i~~~--------~F~I~~--~G~i~~~~~ld~e~~~~~~~l~V~a~D~g~ 452 (817)
+++|+|..+ .|.|+. +|.|+++++||||.. ..|.|+|+|+|+|.
T Consensus 166 ~v~Ysi~~~~~~~~~~~~F~Id~~~tG~i~~~~~LD~E~~-~~y~l~V~A~D~G~ 219 (242)
T 4apx_B 166 QIEYVIQYNPEDPTSNDTFEIPLMLTGNVVLRKRLNYEDK-TRYYVIIQANDRAQ 219 (242)
T ss_dssp CEEEEEECCTTSTTHHHHEECSSTTTCCEEECSCCCTTTC-CEEEEEEEEEECCS
T ss_pred ceEEEEecCCCCcccccceEEcCCCceEEEECCcCChhhC-CEEEEEEEEEECCc
Confidence 999999742 499984 799999999999997 57999999999986
No 33
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.93 E-value=5.8e-27 Score=214.20 Aligned_cols=118 Identities=31% Similarity=0.479 Sum_probs=108.7
Q ss_pred EEEeecCCCCCccccCCCceeEEecCCCCCceEEEEEEecCCCCCCceEEEEEEecCCCCCccEEEecccceEEeccccc
Q psy11097 559 VFITDVNDNKPVFRECSTYYPKVEEGAPNGSPVIKVHATDEDKGVNGQVKYSIVQQPNQKGAKFTVDEETGEVVTNKVFD 638 (817)
Q Consensus 559 I~V~DvNDn~P~f~~~~~~~~~v~En~~~gt~v~~v~A~D~D~g~n~~v~y~l~~~~~~~~~~F~Id~~tG~i~~~~~lD 638 (817)
++|+|+|||+|.|.+ ..|.+.|.|++++|+.|+++.|+|+|.|.|+.++|+|..+......+|.|++.+|.|+++++||
T Consensus 2 ~~V~DvNDn~P~F~~-~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~F~Id~~tG~I~~~~~LD 80 (119)
T 2yst_A 2 SSGSSGNDNSPRFEK-SVYEADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWLSVLHRID 80 (119)
T ss_dssp CCCCCSCCCCCCCSS-SEEEEEEETTCCTTCEEEECCCCCSSSSCCSCCCCEECSCCTTHHHHEEECTTTCEEEECSCCC
T ss_pred CeEecCCCCCCCcCC-CcEEEEEECCCCCCCEEEEEEEEeCCCCCCCeEEEEEecCCCccccEEEEeCCceEEEECccCC
Confidence 468999999999998 7899999999999999999999999999999999999865322235899999999999999999
Q ss_pred ccCCCCcEEEEEEEEEeCCCCCceeEEEEEEEEEecCCCCC
Q psy11097 639 REGDDGKFVSVTIKATDQGEPSLEGVCSFTVEITDVNDNPP 679 (817)
Q Consensus 639 ~E~~~~~~~~l~V~a~D~g~p~~s~~~~v~I~V~DvNDn~P 679 (817)
||.. ..|.|+|+|+|+|.|+++++++|+|+|.|+|||+|
T Consensus 81 ~E~~--~~y~l~V~A~D~g~p~~s~~~~v~I~V~DvNDn~P 119 (119)
T 2yst_A 81 REEV--NQLRFTVMARDRGQPPKTDKATVVLNIKDENDNVP 119 (119)
T ss_dssp TTTC--SEEEEEEEECCSBTTBCCEEEEEEEEEECSTTCCC
T ss_pred cccC--CEEEEEEEEEECCCCCcEEEEEEEEEEEeccCCCC
Confidence 9987 56999999999999999999999999999999998
No 34
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.90 E-value=3.6e-24 Score=195.62 Aligned_cols=115 Identities=24% Similarity=0.425 Sum_probs=102.6
Q ss_pred EEEeeCCCCCCcCcCceeeEEEeCCCCCCcEEEEEEEEeCCCCCceeEEEeecccCCccEEEEEEeCCCC--CCCeEEeC
Q psy11097 241 IYTKNKNDEEPKFSQQVYTPNVDENAGPNTLVTTVVASDKDGDNVSIISVKAKSFADREIRYTLKAQGQG--AGTFNIGP 318 (817)
Q Consensus 241 I~V~DvNDn~P~f~~~~y~~~V~En~~~gt~v~~v~A~D~D~~~~~i~~~~~~~~~~~~i~y~l~~~g~~--~~~F~Id~ 318 (817)
++|+|+|||+|.|.+..|.++|+|++++|+.|+++.|+|+|.+ .|+.++|+|.. +.. .++|.|++
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g------------~n~~i~Y~i~~-~~~~~~~~F~Id~ 68 (119)
T 2yst_A 2 SSGSSGNDNSPRFEKSVYEADLAENSAPGTPILQLRAADLDVG------------VNGQIEYVFGA-ATESVRRLLRLDE 68 (119)
T ss_dssp CCCCCSCCCCCCCSSSEEEEEEETTCCTTCEEEECCCCCSSSS------------CCSCCCCEECS-CCTTHHHHEEECT
T ss_pred CeEecCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCC------------CCCeEEEEEec-CCCccccEEEEeC
Confidence 4689999999999999999999999999999999999999987 36889999973 222 46899999
Q ss_pred ceeEEEeCccCCccccCCCeEEEEEEEEEeCCC-CceEEEEEEEEEEeeCCCCC
Q psy11097 319 TSGIVKLAKELDFEDLRQPHVYSLIVTATEDSG-GFSTSVELTIRVTDVNDNAP 371 (817)
Q Consensus 319 ~tG~i~~~~~LD~E~~~~~~~y~l~V~a~d~~g-~~~~~~~v~I~V~DvNDn~P 371 (817)
.||.|+++++||||.. ..|.|+|.|+|.++ .+++++.|+|+|.|+|||+|
T Consensus 69 ~tG~I~~~~~LD~E~~---~~y~l~V~A~D~g~p~~s~~~~v~I~V~DvNDn~P 119 (119)
T 2yst_A 69 TSGWLSVLHRIDREEV---NQLRFTVMARDRGQPPKTDKATVVLNIKDENDNVP 119 (119)
T ss_dssp TTCEEEECSCCCTTTC---SEEEEEEEECCSBTTBCCEEEEEEEEEECSTTCCC
T ss_pred CceEEEECccCCcccC---CEEEEEEEEEECCCCCcEEEEEEEEEEEeccCCCC
Confidence 9999999999999984 68999999996443 37899999999999999998
No 35
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.89 E-value=7.4e-24 Score=191.64 Aligned_cols=112 Identities=33% Similarity=0.510 Sum_probs=100.8
Q ss_pred EEEeecCCCCCccccCCCceeEEecCCCCCceEEEEEEecCCCCCCceEEEEEEecC-CCCCccEEEecccceEEecccc
Q psy11097 559 VFITDVNDNKPVFRECSTYYPKVEEGAPNGSPVIKVHATDEDKGVNGQVKYSIVQQP-NQKGAKFTVDEETGEVVTNKVF 637 (817)
Q Consensus 559 I~V~DvNDn~P~f~~~~~~~~~v~En~~~gt~v~~v~A~D~D~g~n~~v~y~l~~~~-~~~~~~F~Id~~tG~i~~~~~l 637 (817)
|+|+|+|||+|.|.+ ..|.+.|+||.++|+.|+++.|+|+|.|.|+.++|+|.... +....+|.|++.+|.|+++++|
T Consensus 2 ~~V~DvNDn~P~F~~-~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~F~Id~~tG~I~~~~~L 80 (114)
T 2ee0_A 2 SSGSSGNDNRPVFKE-GQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSL 80 (114)
T ss_dssp CCCCCCCCCCCCCSC-SEEEEEEETTCCTTCEEEECCCCSCSSCCCSCCEEEECSSCCHHHHHHEEECTTTCEEEECSCC
T ss_pred CeEeeCCCCCCCcCC-CcEEEEEECCCCCCCEEEEEEEEeCCCCCCcEEEEEEccCCCCCccceEEEeCCeeEEEECccC
Confidence 468999999999998 78999999999999999999999999999999999997521 1123589999999999999999
Q ss_pred cccCCCCcEEEEEEEEEeCCCCCceeEEEEEEEEEecC
Q psy11097 638 DREGDDGKFVSVTIKATDQGEPSLEGVCSFTVEITDVN 675 (817)
Q Consensus 638 D~E~~~~~~~~l~V~a~D~g~p~~s~~~~v~I~V~DvN 675 (817)
|||.. ..|.|+|+|+|+|.|+ ++++|+|+|+|+|
T Consensus 81 D~E~~--~~y~l~V~A~D~g~~~--~~~~v~I~V~DvN 114 (114)
T 2ee0_A 81 DREET--AIHKVTVLASDGSSTP--ARATVTINVTDVN 114 (114)
T ss_dssp CTTTC--SEEEEEEEEESSSSSC--EEEEEEEEEECCC
T ss_pred CcccC--cEEEEEEEEEECCCCc--eEEEEEEEEEECC
Confidence 99987 5699999999999876 7899999999998
No 36
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.87 E-value=1.3e-22 Score=183.47 Aligned_cols=111 Identities=30% Similarity=0.408 Sum_probs=98.4
Q ss_pred EEEeeCCCCCCcCcCceeeEEEeCCCCCCcEEEEEEEEeCCCCCceeEEEeecccCCccEEEEEEeC--CCCCCCeEEeC
Q psy11097 241 IYTKNKNDEEPKFSQQVYTPNVDENAGPNTLVTTVVASDKDGDNVSIISVKAKSFADREIRYTLKAQ--GQGAGTFNIGP 318 (817)
Q Consensus 241 I~V~DvNDn~P~f~~~~y~~~V~En~~~gt~v~~v~A~D~D~~~~~i~~~~~~~~~~~~i~y~l~~~--g~~~~~F~Id~ 318 (817)
|.|+|+|||+|.|.+..|.++|+||+++|+.|+++.|+|+|.+ .|+.++|+|... +...++|.|++
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g------------~n~~i~Y~i~~~~~~~~~~~F~Id~ 69 (114)
T 2ee0_A 2 SSGSSGNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIG------------SNAEIRYIFGAQVAPATKRLFALNN 69 (114)
T ss_dssp CCCCCCCCCCCCCSCSEEEEEEETTCCTTCEEEECCCCSCSSC------------CCSCCEEEECSSCCHHHHHHEEECT
T ss_pred CeEeeCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCC------------CCcEEEEEEccCCCCCccceEEEeC
Confidence 5689999999999999999999999999999999999999987 368899999631 12457899999
Q ss_pred ceeEEEeCccCCccccCCCeEEEEEEEEEeCCCCceEEEEEEEEEEeeC
Q psy11097 319 TSGIVKLAKELDFEDLRQPHVYSLIVTATEDSGGFSTSVELTIRVTDVN 367 (817)
Q Consensus 319 ~tG~i~~~~~LD~E~~~~~~~y~l~V~a~d~~g~~~~~~~v~I~V~DvN 367 (817)
.||.|++.++||||.. ..|.|.|.|+| .|+.+++++|+|+|+|+|
T Consensus 70 ~tG~I~~~~~LD~E~~---~~y~l~V~A~D-~g~~~~~~~v~I~V~DvN 114 (114)
T 2ee0_A 70 TTGLITVQRSLDREET---AIHKVTVLASD-GSSTPARATVTINVTDVN 114 (114)
T ss_dssp TTCEEEECSCCCTTTC---SEEEEEEEEES-SSSSCEEEEEEEEEECCC
T ss_pred CeeEEEECccCCcccC---cEEEEEEEEEE-CCCCceEEEEEEEEEECC
Confidence 9999999999999984 78999999995 555568899999999998
No 37
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.84 E-value=1.3e-21 Score=179.33 Aligned_cols=116 Identities=22% Similarity=0.344 Sum_probs=103.7
Q ss_pred cCCCCCccccCCCceeEEecCCCCCceEEEEEEecCCCCCCceEEEEEEecCC--CCCccEEEecccceEEecccccccC
Q psy11097 564 VNDNKPVFRECSTYYPKVEEGAPNGSPVIKVHATDEDKGVNGQVKYSIVQQPN--QKGAKFTVDEETGEVVTNKVFDREG 641 (817)
Q Consensus 564 vNDn~P~f~~~~~~~~~v~En~~~gt~v~~v~A~D~D~g~n~~v~y~l~~~~~--~~~~~F~Id~~tG~i~~~~~lD~E~ 641 (817)
.+.++|.|.. +.|.+.+.|++++|+.|++|. +|+|.|.|+.++|+|.++.. .....|.||+.+|.|++.++||||.
T Consensus 5 ~~r~~p~f~~-~~~~v~e~e~~~~gt~v~~v~-~D~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~ 82 (123)
T 2yqg_A 5 SSGQKRAWIT-APVALREGEDLSKKNPIAKIH-SDLAEERGLKITYKYTGKGITEPPFGIFVFNKDTGELNVTSILDREE 82 (123)
T ss_dssp SSCSCCSSCC-CCEEEESSSCCCSSCCCBCCC-CHHHHHHTCCCEEEEEEBTTTBSSCSSEEEETTTTEEEECSCCBTTT
T ss_pred ccccCCccCC-CCEEEEecCCCCCCCEEEEEE-ECCCCCCCceEEEEEecCCCCCCcCCCEEEeCCcCEEEECcccCccc
Confidence 3578999997 788888888889999999999 69999999999999987521 2235899999999999999999999
Q ss_pred CCCcEEEEEEEEEeCCCCCceeEEEEEEEEEecCCCCCccCC
Q psy11097 642 DDGKFVSVTIKATDQGEPSLEGVCSFTVEITDVNDNPPLFDR 683 (817)
Q Consensus 642 ~~~~~~~l~V~a~D~g~p~~s~~~~v~I~V~DvNDn~P~f~~ 683 (817)
. ..|.|+|.|+|+|.|++++++.|.|+|+|+|||+|+|.+
T Consensus 83 ~--~~y~l~V~A~D~g~p~~~~~~~v~I~V~DvNDn~P~F~~ 122 (123)
T 2yqg_A 83 T--PFFLLTGYALDARGNNVEKPLELRIKVLDINDNEPVFTQ 122 (123)
T ss_dssp B--SEEEEEEEEECTTCCEEEEEECCEEEEECTTCCCCCCCC
T ss_pred C--ceEEEEEEEEECCCCceEEEEEEEEEEEEcCCCCCEeCC
Confidence 8 569999999999999999999999999999999999975
No 38
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A
Probab=99.79 E-value=1.3e-19 Score=162.52 Aligned_cols=101 Identities=20% Similarity=0.311 Sum_probs=79.9
Q ss_pred CceeEEecCCCCCce--EEEEEEecCCCCCCceEEEEEEecC--CCCCccEEEecccceEEecccccccCCCCcEEEEEE
Q psy11097 576 TYYPKVEEGAPNGSP--VIKVHATDEDKGVNGQVKYSIVQQP--NQKGAKFTVDEETGEVVTNKVFDREGDDGKFVSVTI 651 (817)
Q Consensus 576 ~~~~~v~En~~~gt~--v~~v~A~D~D~g~n~~v~y~l~~~~--~~~~~~F~Id~~tG~i~~~~~lD~E~~~~~~~~l~V 651 (817)
.|.+.|+||++.|+. |+++ |.|.|.|+.++|+|..+. +.....|.|++.+|.|++.++||||.. ..|.|+|
T Consensus 6 ~~~~~v~En~~~gt~~~v~~v---d~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~--~~y~l~V 80 (110)
T 1ncg_A 6 IPPINLPENSRGPFPQELVRI---RSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELI--ARFHLRA 80 (110)
T ss_dssp CCCEEECSSCCCCSSEEEEEC---CCGGGGGSCCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTC--CEEEEEE
T ss_pred eeeEEEeCCCCCCCcEEEEEE---eCCCCCCCEEEEEEeCCCCCCCcCCEEEEECCCCEEEECCcCCcccC--CeEEEEE
Confidence 478899999999995 4544 778888999999998641 123458999999999999999999988 5699999
Q ss_pred EEEeCCCCCceeEEEEEEEEEecCCCCCcc
Q psy11097 652 KATDQGEPSLEGVCSFTVEITDVNDNPPLF 681 (817)
Q Consensus 652 ~a~D~g~p~~s~~~~v~I~V~DvNDn~P~f 681 (817)
.|+|+|.|++++++.|+|+|+|+|||+|+|
T Consensus 81 ~A~D~g~p~~~~~~~v~I~V~DvNDn~P~F 110 (110)
T 1ncg_A 81 HAVDINGNQVENPIDIVINVIDMNDNRPEF 110 (110)
T ss_dssp EEECTTSCBCSCCEEEEEEEC---------
T ss_pred EEEECCCCceeeEEEEEEEEEECCCCCCCC
Confidence 999999999999999999999999999998
No 39
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.78 E-value=1.5e-19 Score=165.48 Aligned_cols=114 Identities=22% Similarity=0.347 Sum_probs=99.7
Q ss_pred CCCCCCcCcCceeeEEEeCCCCCCcEEEEEEEEeCCCCCceeEEEeecccCCccEEEEEEeCC---CCCCCeEEeCceeE
Q psy11097 246 KNDEEPKFSQQVYTPNVDENAGPNTLVTTVVASDKDGDNVSIISVKAKSFADREIRYTLKAQG---QGAGTFNIGPTSGI 322 (817)
Q Consensus 246 vNDn~P~f~~~~y~~~V~En~~~gt~v~~v~A~D~D~~~~~i~~~~~~~~~~~~i~y~l~~~g---~~~~~F~Id~~tG~ 322 (817)
.+.+.|.|....|.+.+.|++++|+.|++|. +|+|.+ .|+.|+|+|...+ ...+.|.|++.||.
T Consensus 5 ~~r~~p~f~~~~~~v~e~e~~~~gt~v~~v~-~D~D~g------------~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~ 71 (123)
T 2yqg_A 5 SSGQKRAWITAPVALREGEDLSKKNPIAKIH-SDLAEE------------RGLKITYKYTGKGITEPPFGIFVFNKDTGE 71 (123)
T ss_dssp SSCSCCSSCCCCEEEESSSCCCSSCCCBCCC-CHHHHH------------HTCCCEEEEEEBTTTBSSCSSEEEETTTTE
T ss_pred ccccCCccCCCCEEEEecCCCCCCCEEEEEE-ECCCCC------------CCceEEEEEecCCCCCCcCCCEEEeCCcCE
Confidence 4689999999999999999999999999999 699976 3678999998543 34578999999999
Q ss_pred EEeCccCCccccCCCeEEEEEEEEEeCCC-CceEEEEEEEEEEeeCCCCCcccC
Q psy11097 323 VKLAKELDFEDLRQPHVYSLIVTATEDSG-GFSTSVELTIRVTDVNDNAPKFEL 375 (817)
Q Consensus 323 i~~~~~LD~E~~~~~~~y~l~V~a~d~~g-~~~~~~~v~I~V~DvNDn~P~f~~ 375 (817)
|++.++||||.. ..|.|+|.|+|.++ .+++++.|.|+|+|+|||+|+|.+
T Consensus 72 i~~~~~LDrE~~---~~y~l~V~A~D~g~p~~~~~~~v~I~V~DvNDn~P~F~~ 122 (123)
T 2yqg_A 72 LNVTSILDREET---PFFLLTGYALDARGNNVEKPLELRIKVLDINDNEPVFTQ 122 (123)
T ss_dssp EEECSCCBTTTB---SEEEEEEEEECTTCCEEEEEECCEEEEECTTCCCCCCCC
T ss_pred EEECcccCcccC---ceEEEEEEEEECCCCceEEEEEEEEEEEEcCCCCCEeCC
Confidence 999999999984 68999999996433 378899999999999999999975
No 40
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A
Probab=99.71 E-value=1.8e-17 Score=148.55 Aligned_cols=96 Identities=21% Similarity=0.288 Sum_probs=73.4
Q ss_pred eEEEEeccCCCCce--EEEEEeecCCCCcc--EEEEEEec----CCCCceEEEcceeEEEeccCCCcccccEEEEEEEEE
Q psy11097 110 MQAVVQLNAPPNTP--VFTLQARDPDSDHN--IHYFIVRD----RTGGRFEVDERSGVVRTRGTDPFQLDQEYVLYVKAE 181 (817)
Q Consensus 110 ~~~~v~E~~~~gt~--v~~v~A~D~D~g~~--~~y~l~~~----~~~~~F~Id~~tG~i~~~~~ld~e~~~~y~l~v~a~ 181 (817)
|.++|+||+++|+. |+++ |.|.|.| ++|+|.++ +..+.|+|++.||.|+++++||||....|.|+|+|+
T Consensus 7 ~~~~v~En~~~gt~~~v~~v---d~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~ 83 (110)
T 1ncg_A 7 PPINLPENSRGPFPQELVRI---RSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARFHLRAHAV 83 (110)
T ss_dssp CCEEECSSCCCCSSEEEEEC---CCGGGGGSCCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEE
T ss_pred eeEEEeCCCCCCCcEEEEEE---eCCCCCCCEEEEEEeCCCCCCCcCCEEEEECCCCEEEECCcCCcccCCeEEEEEEEE
Confidence 46779999999996 5555 5665554 99999864 345789999999999999999999999999999999
Q ss_pred ecCCcccccccccCccEEEEEeCCCCCCeeeccceEEEecccccCCCCCCcceEEEEEEEEEeeCCCCCCcC
Q psy11097 182 DQNGRKDERKFQSTPEERLSIVGGKRAPQFYMPSYEAEIPENQKKDTEYPSMTGTATVRIYTKNKNDEEPKF 253 (817)
Q Consensus 182 D~~g~~~~~~~~~~~~~~~~i~~~~~~p~f~~~~y~~~i~e~~~~d~~~p~~s~~~~v~I~V~DvNDn~P~f 253 (817)
|.++ |++++++.|+|.|+|+|||+|.|
T Consensus 84 D~g~---------------------------------------------p~~~~~~~v~I~V~DvNDn~P~F 110 (110)
T 1ncg_A 84 DING---------------------------------------------NQVENPIDIVINVIDMNDNRPEF 110 (110)
T ss_dssp CTTS---------------------------------------------CBCSCCEEEEEEEC---------
T ss_pred ECCC---------------------------------------------CceeeEEEEEEEEEECCCCCCCC
Confidence 9653 45788899999999999999998
No 41
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}
Probab=99.70 E-value=3.8e-18 Score=156.12 Aligned_cols=104 Identities=14% Similarity=0.123 Sum_probs=90.4
Q ss_pred eEEEEeccCCCCceEEEEEeecCCCCcc-E---EEEEEecCCCCceEEEcceeEEEeccCCCcccc----cEEEEEEEEE
Q psy11097 110 MQAVVQLNAPPNTPVFTLQARDPDSDHN-I---HYFIVRDRTGGRFEVDERSGVVRTRGTDPFQLD----QEYVLYVKAE 181 (817)
Q Consensus 110 ~~~~v~E~~~~gt~v~~v~A~D~D~g~~-~---~y~l~~~~~~~~F~Id~~tG~i~~~~~ld~e~~----~~y~l~v~a~ 181 (817)
+..+|+|++|+|+.|++| |+|+|.+.+ + +|+|.+++..++|.||+.||.|++++.||||.. ..|.|.|+|.
T Consensus 13 ~~~~V~E~~~~Gt~V~~v-a~D~d~~~~~i~~~~Y~i~~~~~~~~F~Id~~tG~i~~~~~LDRE~~c~~~~~y~l~v~a~ 91 (125)
T 1wyj_A 13 ITYSVLEETDRGSLVGNL-AKDLGLSLRELITRGAQILSKGNKQLLQLEQKSGNLLLKEKLDREELCGSTNPCILHFQVL 91 (125)
T ss_dssp CCEEECSSCCTTCEEEES-TTTTTCCHHHHHHTTCEEECSSSSCSEEECSSSSEEEESSCCCSTTTCTTCSSCCBCCEEE
T ss_pred EEEEEECCCCCCCEEEEE-EecCCCCCCceeeEEEEEecCCCCCeEEEECCccEEEECccccchhhcccCCcEEEEEEEE
Confidence 455699999999999999 999998754 4 899987777789999999999999999999998 8899999998
Q ss_pred ecCCcccccccccCccEEEEEeCCCCCCeeeccceEEEecccccCCCCCCcceEEEEEEEEEeeCCCCCCcCcCceeeEE
Q psy11097 182 DQNGRKDERKFQSTPEERLSIVGGKRAPQFYMPSYEAEIPENQKKDTEYPSMTGTATVRIYTKNKNDEEPKFSQQVYTPN 261 (817)
Q Consensus 182 D~~g~~~~~~~~~~~~~~~~i~~~~~~p~f~~~~y~~~i~e~~~~d~~~p~~s~~~~v~I~V~DvNDn~P~f~~~~y~~~ 261 (817)
+.. ++ ..+.|.|.|+|+|||+|.|.+..|.++
T Consensus 92 ~~~-----------------------------------------------p~-~~~~V~I~V~DvNDN~P~F~~~~y~vs 123 (125)
T 1wyj_A 92 LKS-----------------------------------------------PV-QFIQGEIQLQDVNDHAPEFMEDESGPS 123 (125)
T ss_dssp ETT-----------------------------------------------TT-EEECCCEEECCCCCCCCCCCCCCCCCC
T ss_pred ECC-----------------------------------------------CC-eEEEEEEEEEEccCCCCcCCCcEEEEe
Confidence 731 12 367899999999999999999988765
Q ss_pred E
Q psy11097 262 V 262 (817)
Q Consensus 262 V 262 (817)
+
T Consensus 124 ~ 124 (125)
T 1wyj_A 124 S 124 (125)
T ss_dssp C
T ss_pred c
Confidence 3
No 42
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}
Probab=99.68 E-value=6.6e-18 Score=154.55 Aligned_cols=108 Identities=23% Similarity=0.236 Sum_probs=89.5
Q ss_pred ceeeEEEeCCCCCCcEEEEEEEEeCCCCCceeEEEeecccCCccE---EEEEEeCCCCCCCeEEeCceeEEEeCccCCcc
Q psy11097 256 QVYTPNVDENAGPNTLVTTVVASDKDGDNVSIISVKAKSFADREI---RYTLKAQGQGAGTFNIGPTSGIVKLAKELDFE 332 (817)
Q Consensus 256 ~~y~~~V~En~~~gt~v~~v~A~D~D~~~~~i~~~~~~~~~~~~i---~y~l~~~g~~~~~F~Id~~tG~i~~~~~LD~E 332 (817)
..|..+|+|++++|+.|++| |+|.|.+. +.+ +|+|.. ++..+.|.||+.||.|++.++||||
T Consensus 11 ~~~~~~V~E~~~~Gt~V~~v-a~D~d~~~-------------~~i~~~~Y~i~~-~~~~~~F~Id~~tG~i~~~~~LDRE 75 (125)
T 1wyj_A 11 ATITYSVLEETDRGSLVGNL-AKDLGLSL-------------RELITRGAQILS-KGNKQLLQLEQKSGNLLLKEKLDRE 75 (125)
T ss_dssp CCCCEEECSSCCTTCEEEES-TTTTTCCH-------------HHHHHTTCEEEC-SSSSCSEEECSSSSEEEESSCCCST
T ss_pred ceEEEEEECCCCCCCEEEEE-EecCCCCC-------------CceeeEEEEEec-CCCCCeEEEECCccEEEECccccch
Confidence 45678999999999999999 99988652 334 899973 5567899999999999999999999
Q ss_pred ccCCC-eEEEEEEEEEeCCCCceEEEEEEEEEEeeCCCCCcccCCCcce
Q psy11097 333 DLRQP-HVYSLIVTATEDSGGFSTSVELTIRVTDVNDNAPKFELPDYQA 380 (817)
Q Consensus 333 ~~~~~-~~y~l~V~a~d~~g~~~~~~~v~I~V~DvNDn~P~f~~~~y~~ 380 (817)
..+.+ ..|.|.+.|.+ .+.+ ..+.|.|+|+|+|||+|+|.+..|..
T Consensus 76 ~~c~~~~~y~l~v~a~~-~~p~-~~~~V~I~V~DvNDN~P~F~~~~y~v 122 (125)
T 1wyj_A 76 ELCGSTNPCILHFQVLL-KSPV-QFIQGEIQLQDVNDHAPEFMEDESGP 122 (125)
T ss_dssp TTCTTCSSCCBCCEEEE-TTTT-EEECCCEEECCCCCCCCCCCCCCCCC
T ss_pred hhcccCCcEEEEEEEEE-CCCC-eEEEEEEEEEEccCCCCcCCCcEEEE
Confidence 85321 56899999985 3333 57899999999999999999998864
No 43
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus}
Probab=99.66 E-value=3e-16 Score=137.12 Aligned_cols=91 Identities=29% Similarity=0.413 Sum_probs=81.3
Q ss_pred ceeEEecCCC--CCceEEEEEEecCCCCCCceEEEEEEecCCCCCccEEEecccceEEecccccccCCCCcEEEEEEEEE
Q psy11097 577 YYPKVEEGAP--NGSPVIKVHATDEDKGVNGQVKYSIVQQPNQKGAKFTVDEETGEVVTNKVFDREGDDGKFVSVTIKAT 654 (817)
Q Consensus 577 ~~~~v~En~~--~gt~v~~v~A~D~D~g~n~~v~y~l~~~~~~~~~~F~Id~~tG~i~~~~~lD~E~~~~~~~~l~V~a~ 654 (817)
+.+.|+||.+ .|+.|++|. +|+|.| |+.++|+|.++. ....|.||+.+|.|++.++||||.. ..|.|+|.|+
T Consensus 6 ~~~~v~En~~~~~g~~v~~v~-~D~D~g-Ng~v~Ysi~~~~--~~~~F~Id~~tG~i~~~~~LDrE~~--~~y~l~V~A~ 79 (99)
T 1zvn_A 6 NQFFVLEEYTGTDPLYVGKLH-SDMDRG-DGSIKYILSGEG--AGIVFTIDDTTGDIHAIQRLDREER--SQYTLRAQAL 79 (99)
T ss_dssp CEEEEEGGGCSSSCEEEEECC-BTTCCS-SSCEEEEEEETT--BTTTEEECTTTCEEEECSCCCTTTC--SEEEEEEEEE
T ss_pred cEEEEECCCCCCCCcEEEEEE-ECCCCC-CCEEEEEEeCCC--CCceEEEeCCCCCEEECeecCCccC--CeEEEEEEEE
Confidence 5678999976 688999999 999999 999999998642 2248999999999999999999998 5699999999
Q ss_pred eCC-CCCceeEEEEEEEEEe
Q psy11097 655 DQG-EPSLEGVCSFTVEITD 673 (817)
Q Consensus 655 D~g-~p~~s~~~~v~I~V~D 673 (817)
|+| .|+++++++|.|+|+|
T Consensus 80 D~G~~p~l~~~~~v~I~V~D 99 (99)
T 1zvn_A 80 DRRTGRPMEPESEFIIKIQD 99 (99)
T ss_dssp ETTTCCBSSCCEEEEEEEEC
T ss_pred ECCCCCCcceeEEEEEEEeC
Confidence 999 4999999999999987
No 44
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A
Probab=99.65 E-value=3.1e-16 Score=136.88 Aligned_cols=91 Identities=27% Similarity=0.357 Sum_probs=79.4
Q ss_pred ceeEEecCCC--CCceEEEEEEecCCCCCCceEEEEEEecCCCCCccEEEecccceEEecccccccCCCCcEEEEEEEEE
Q psy11097 577 YYPKVEEGAP--NGSPVIKVHATDEDKGVNGQVKYSIVQQPNQKGAKFTVDEETGEVVTNKVFDREGDDGKFVSVTIKAT 654 (817)
Q Consensus 577 ~~~~v~En~~--~gt~v~~v~A~D~D~g~n~~v~y~l~~~~~~~~~~F~Id~~tG~i~~~~~lD~E~~~~~~~~l~V~a~ 654 (817)
+.+.|+||.+ .|+.|+++. +|+|.| |+.|+|+|.+.. ....|.||+.+|.|++.++||||.. ..|.|+|+|+
T Consensus 5 ~~~~v~En~~~p~~~~v~~v~-~D~D~g-N~~v~Ysi~~~~--~~~~F~Id~~tG~i~~~~~LDrE~~--~~y~l~v~A~ 78 (98)
T 1zxk_A 5 NQMFVLEEFSGPEPILVGRLH-TDLDPG-SKKIKYILSGDG--AGTIFQINDITGDIHAIKRLDREEK--AEYTLTAQAV 78 (98)
T ss_dssp CEEEECGGGCSSSCEEEEECC-BCCCCC---CEEEEEEETT--BTTTEEECTTTCEEEECSCCCTTTC--SEEEEEEEEE
T ss_pred ceEEEECCCCCCCCeEEEEEE-ECCCCC-CCEEEEEEeCCC--CCCEEEEECCccEEEECccCCCcCC--CeEEEEEEEE
Confidence 5678999995 899999997 999999 999999998642 2347999999999999999999998 5699999999
Q ss_pred eCCC-CCceeEEEEEEEEEe
Q psy11097 655 DQGE-PSLEGVCSFTVEITD 673 (817)
Q Consensus 655 D~g~-p~~s~~~~v~I~V~D 673 (817)
|+|. |++++++.|.|+|+|
T Consensus 79 D~g~~~~l~~~~~v~I~V~D 98 (98)
T 1zxk_A 79 DFETNKPLEPPSEFIIKVQD 98 (98)
T ss_dssp ETTTCCBSSCCEEEEEEECC
T ss_pred ECCCCCCcceeEEEEEEEEC
Confidence 9997 789999999999987
No 45
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus}
Probab=99.63 E-value=3.4e-16 Score=136.81 Aligned_cols=90 Identities=21% Similarity=0.198 Sum_probs=77.7
Q ss_pred eEEEEeCCCC--CCcEEEEEEEEeCCCCCCceEEEEEecCcCCCCCcceEEeCCeeEEEEeeeceEEEEEeeCCCCCCcc
Q psy11097 686 YVENVKQDAS--IGTNILRVSASDEDADNNGAIVYTLSAPYNQMDLEYFEIQPESGWIVLKKPLDVYYYIVDSPRNEGKD 763 (817)
Q Consensus 686 y~~~v~E~~~--~g~~v~~v~A~D~D~g~n~~i~Y~l~~~~~~~~~~~F~Id~~tG~i~~~~~ld~~y~~~~~~~~~~~~ 763 (817)
+.+.|+||.+ .|+.|++|+ +|+|.| |++++|+|.++. ..+
T Consensus 6 ~~~~v~En~~~~~g~~v~~v~-~D~D~g-Ng~v~Ysi~~~~------------------------------------~~~ 47 (99)
T 1zvn_A 6 NQFFVLEEYTGTDPLYVGKLH-SDMDRG-DGSIKYILSGEG------------------------------------AGI 47 (99)
T ss_dssp CEEEEEGGGCSSSCEEEEECC-BTTCCS-SSCEEEEEEETT------------------------------------BTT
T ss_pred cEEEEECCCCCCCCcEEEEEE-ECCCCC-CCEEEEEEeCCC------------------------------------CCc
Confidence 4568999976 689999999 999999 999999997621 125
Q ss_pred cEEEeCceeEEEEcccCCcccccEEEEEEEEEeCC-CCCCCCCCCCCCccc
Q psy11097 764 FFEINLQSGEVFTKVVFDREKQGAYALEVEARDGA-PSARPNSDGEPNSAC 813 (817)
Q Consensus 764 ~F~Id~~tG~l~~~~~LDrE~~~~y~l~V~a~D~g-~p~~~~~~~~~v~v~ 813 (817)
.|.||+.||.|++.++||||+++.|.|+|+|+|+| .|+++++.++.|.|.
T Consensus 48 ~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D~G~~p~l~~~~~v~I~V~ 98 (99)
T 1zvn_A 48 VFTIDDTTGDIHAIQRLDREERSQYTLRAQALDRRTGRPMEPESEFIIKIQ 98 (99)
T ss_dssp TEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTTCCBSSCCEEEEEEEE
T ss_pred eEEEeCCCCCEEECeecCCccCCeEEEEEEEEECCCCCCcceeEEEEEEEe
Confidence 78899999999999999999999999999999999 488998888877763
No 46
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A
Probab=99.63 E-value=3.4e-16 Score=136.62 Aligned_cols=90 Identities=22% Similarity=0.192 Sum_probs=75.9
Q ss_pred eEEEEeCCCC--CCcEEEEEEEEeCCCCCCceEEEEEecCcCCCCCcceEEeCCeeEEEEeeeceEEEEEeeCCCCCCcc
Q psy11097 686 YVENVKQDAS--IGTNILRVSASDEDADNNGAIVYTLSAPYNQMDLEYFEIQPESGWIVLKKPLDVYYYIVDSPRNEGKD 763 (817)
Q Consensus 686 y~~~v~E~~~--~g~~v~~v~A~D~D~g~n~~i~Y~l~~~~~~~~~~~F~Id~~tG~i~~~~~ld~~y~~~~~~~~~~~~ 763 (817)
+.+.|+||.+ .|+.|+++. +|+|.| |++++|+|.+.. ..+
T Consensus 5 ~~~~v~En~~~p~~~~v~~v~-~D~D~g-N~~v~Ysi~~~~------------------------------------~~~ 46 (98)
T 1zxk_A 5 NQMFVLEEFSGPEPILVGRLH-TDLDPG-SKKIKYILSGDG------------------------------------AGT 46 (98)
T ss_dssp CEEEECGGGCSSSCEEEEECC-BCCCCC---CEEEEEEETT------------------------------------BTT
T ss_pred ceEEEECCCCCCCCeEEEEEE-ECCCCC-CCEEEEEEeCCC------------------------------------CCC
Confidence 4568999995 899999997 999999 999999997520 124
Q ss_pred cEEEeCceeEEEEcccCCcccccEEEEEEEEEeCCC-CCCCCCCCCCCccc
Q psy11097 764 FFEINLQSGEVFTKVVFDREKQGAYALEVEARDGAP-SARPNSDGEPNSAC 813 (817)
Q Consensus 764 ~F~Id~~tG~l~~~~~LDrE~~~~y~l~V~a~D~g~-p~~~~~~~~~v~v~ 813 (817)
.|.||+.||.|++.++||||+++.|.|+|+|+|+|. |+++++.+++|.|.
T Consensus 47 ~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~A~D~g~~~~l~~~~~v~I~V~ 97 (98)
T 1zxk_A 47 IFQINDITGDIHAIKRLDREEKAEYTLTAQAVDFETNKPLEPPSEFIIKVQ 97 (98)
T ss_dssp TEEECTTTCEEEECSCCCTTTCSEEEEEEEEEETTTCCBSSCCEEEEEEEC
T ss_pred EEEEECCccEEEECccCCCcCCCeEEEEEEEEECCCCCCcceeEEEEEEEE
Confidence 788999999999999999999999999999999986 88998888877763
No 47
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A
Probab=99.62 E-value=1.1e-15 Score=133.84 Aligned_cols=91 Identities=21% Similarity=0.284 Sum_probs=80.9
Q ss_pred ceeEEecCCCC--CceEEEEEEecCCCCCCceEEEEEEec--CCCCCccEEEecccceEEecccccccCCCCcEEEEEEE
Q psy11097 577 YYPKVEEGAPN--GSPVIKVHATDEDKGVNGQVKYSIVQQ--PNQKGAKFTVDEETGEVVTNKVFDREGDDGKFVSVTIK 652 (817)
Q Consensus 577 ~~~~v~En~~~--gt~v~~v~A~D~D~g~n~~v~y~l~~~--~~~~~~~F~Id~~tG~i~~~~~lD~E~~~~~~~~l~V~ 652 (817)
+.+.|+||.+. |+.|++|.|+|+|. .++|+|.+. .+...+.|.||+.+|.|++.++||||.. ..|.|+|.
T Consensus 5 ~~~~V~En~~~~~g~~v~~v~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~--~~y~l~V~ 78 (99)
T 3k6d_A 5 PSISIPENQRIPFPKIVGRVVVSDRIP----GSKIKLYGKGVDQEPKGIFKINENSGEVSVTKALDREAI--PSYQLQVE 78 (99)
T ss_dssp CCEEEETTCCSCSSEEEEECBCSSCCT----TCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTC--CEEEEEEE
T ss_pred CcEEEeCCCCCCCCcEEEEEEEECCCC----cEEEEEecCcCCCCCCCEEEEECCceEEEECcCCCcccC--ceEEEEEE
Confidence 46789999999 99999999999997 699999852 1223458999999999999999999998 56999999
Q ss_pred EEeCCCCCceeEEEEEEEEEe
Q psy11097 653 ATDQGEPSLEGVCSFTVEITD 673 (817)
Q Consensus 653 a~D~g~p~~s~~~~v~I~V~D 673 (817)
|+|+|.|++++++.|+|+|+|
T Consensus 79 A~D~g~~~l~~~~~v~I~V~D 99 (99)
T 3k6d_A 79 TTDENGKTIEGPVDLEILVID 99 (99)
T ss_dssp EECTTCCEEEEEEEEEEEEEC
T ss_pred EEECCCCceeeEEEEEEEEEC
Confidence 999999999999999999987
No 48
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus}
Probab=99.61 E-value=3.5e-15 Score=130.98 Aligned_cols=90 Identities=23% Similarity=0.326 Sum_probs=79.8
Q ss_pred eeEEecCCCC--CceEEEEEEecCCCCCCceEEEEEEecC--CCCCccEEEecccceEEecccccccCCCCcEEEEEEEE
Q psy11097 578 YPKVEEGAPN--GSPVIKVHATDEDKGVNGQVKYSIVQQP--NQKGAKFTVDEETGEVVTNKVFDREGDDGKFVSVTIKA 653 (817)
Q Consensus 578 ~~~v~En~~~--gt~v~~v~A~D~D~g~n~~v~y~l~~~~--~~~~~~F~Id~~tG~i~~~~~lD~E~~~~~~~~l~V~a 653 (817)
.+.|+||.+. |+.|++|.|+|+|. .++|+|.+.. ......|.||+.||.|++.++||||.. ..|.|+|+|
T Consensus 7 ~~~V~EN~~~~~g~~v~~V~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~--~~y~l~V~A 80 (100)
T 3k6f_A 7 PILIPENQRQPFPRDVGKVVDSDRPE----GSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDRETI--ATYQLYVET 80 (100)
T ss_dssp CEEEETTCCSSSCEEEEECEETTCCT----TCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTC--SEEEEEEEE
T ss_pred cEEEeCCCCCCCCcEEEEEEEEcCCC----CEEEEEeCCCCCCCcCCEEEEECCCCEEEECcccCCcCC--CEEEEEEEE
Confidence 5679999998 89999999999997 5899998631 122358999999999999999999998 569999999
Q ss_pred EeCCCCCceeEEEEEEEEEe
Q psy11097 654 TDQGEPSLEGVCSFTVEITD 673 (817)
Q Consensus 654 ~D~g~p~~s~~~~v~I~V~D 673 (817)
+|+|.|+++++++|+|+|+|
T Consensus 81 ~D~g~p~l~~~~~v~I~V~D 100 (100)
T 3k6f_A 81 TDASGKTLEGPVPLEVIVID 100 (100)
T ss_dssp ECTTCCEEEEEEEEEEEEEC
T ss_pred EECCCCcccceEEEEEEEEC
Confidence 99999999999999999987
No 49
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B
Probab=99.60 E-value=2.1e-15 Score=133.57 Aligned_cols=92 Identities=21% Similarity=0.256 Sum_probs=78.8
Q ss_pred eeEEecCCC--CCceEEEEEEecCCCCCCceEEEEEEecCCC--CCccEEEecccceEEecccccccCCCCcEEEEEEEE
Q psy11097 578 YPKVEEGAP--NGSPVIKVHATDEDKGVNGQVKYSIVQQPNQ--KGAKFTVDEETGEVVTNKVFDREGDDGKFVSVTIKA 653 (817)
Q Consensus 578 ~~~v~En~~--~gt~v~~v~A~D~D~g~n~~v~y~l~~~~~~--~~~~F~Id~~tG~i~~~~~lD~E~~~~~~~~l~V~a 653 (817)
.+.|+||.+ .|+.|+++.| | .|.|+.++|+|.++... ..+.|.||+.+|.|++.++||||.. ..|.|+|+|
T Consensus 10 ~~~V~En~~~~~~~~v~~v~A-d--~g~N~~i~Ysi~~~~~~~~~~~~F~Id~~tG~I~~~~~LDrE~~--~~y~l~V~A 84 (105)
T 2omz_B 10 PISCPENEKGPFPKNLVQIKS-N--KDKEGKVFYSITGQGADTPPVGVFIIERETGWLKVTEPLDRERI--ATYTLFSHA 84 (105)
T ss_dssp CCCEESSCCSSSSEEEEECEE-G--GGGSSCCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTC--CEEEEEEEE
T ss_pred CEEEeCCCCCCCCcEEEEEEC-C--CCCCCeEEEEEeCCCCCCCccCEEEEeCCCCEEEECccCCcCCC--CeEEEEEEE
Confidence 457999999 5789999999 3 35699999999875321 1348999999999999999999998 569999999
Q ss_pred EeCCCCCceeEEEEEEEEEec
Q psy11097 654 TDQGEPSLEGVCSFTVEITDV 674 (817)
Q Consensus 654 ~D~g~p~~s~~~~v~I~V~Dv 674 (817)
+|+|.|++++++.|.|+|+|+
T Consensus 85 ~D~g~p~~~~~~~v~I~V~Dv 105 (105)
T 2omz_B 85 VSSNGNAVEDPMEILITVTDQ 105 (105)
T ss_dssp ECTTSCBSSCCEEEEEEEEC-
T ss_pred EECCCCceeeEEEEEEEEEeC
Confidence 999999999999999999996
No 50
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus}
Probab=99.59 E-value=5.9e-15 Score=129.29 Aligned_cols=90 Identities=18% Similarity=0.281 Sum_probs=79.3
Q ss_pred eeEEecCCCCC--ceEEEEEEecCCCCCCceEEEEEEecC--CCCCccEEEecccceEEecccccccCCCCcEEEEEEEE
Q psy11097 578 YPKVEEGAPNG--SPVIKVHATDEDKGVNGQVKYSIVQQP--NQKGAKFTVDEETGEVVTNKVFDREGDDGKFVSVTIKA 653 (817)
Q Consensus 578 ~~~v~En~~~g--t~v~~v~A~D~D~g~n~~v~y~l~~~~--~~~~~~F~Id~~tG~i~~~~~lD~E~~~~~~~~l~V~a 653 (817)
.+.|+||.+.| +.|++|.|+|+|. .++|+|.+.. +...+.|.||+.+|.|++.++||||.. ..|.|+|+|
T Consensus 6 ~~~v~EN~~~g~~~~v~~V~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~--~~y~l~v~A 79 (99)
T 3k6i_A 6 PILIPENQRPPFPRSVGKVIRSEGTE----GAKFRLSGKGVDQDPKGIFRINEISGDVSVTRPLDREAI--ANYELEVEV 79 (99)
T ss_dssp CEEEETTCCSSSCEEEEECEETTCCS----SEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTC--CEEEEEEEE
T ss_pred cEEEeCCCCCCCCeEEEEEEEEcCCC----eEEEEEeCCCCCCCcCCEEEEECCCcEEEECcccCCccC--CEEEEEEEE
Confidence 45799999987 8899999999997 6999998531 122358999999999999999999998 569999999
Q ss_pred EeCCCCCceeEEEEEEEEEe
Q psy11097 654 TDQGEPSLEGVCSFTVEITD 673 (817)
Q Consensus 654 ~D~g~p~~s~~~~v~I~V~D 673 (817)
+|+|.|+++++++|.|+|+|
T Consensus 80 ~D~g~~~l~~~~~v~I~V~D 99 (99)
T 3k6i_A 80 TDLSGKIIDGPVRLDISVID 99 (99)
T ss_dssp EETTSCEEEEEEEEEEEEEC
T ss_pred EECCCCceeeeEEEEEEEEC
Confidence 99999999999999999987
No 51
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A
Probab=99.58 E-value=5.3e-15 Score=129.51 Aligned_cols=73 Identities=21% Similarity=0.184 Sum_probs=65.9
Q ss_pred EEEEeccCCC--CceEEEEEeecCCCCccEEEEEEec----CCCCceEEEcceeEEEeccCCCcccccEEEEEEEEEecC
Q psy11097 111 QAVVQLNAPP--NTPVFTLQARDPDSDHNIHYFIVRD----RTGGRFEVDERSGVVRTRGTDPFQLDQEYVLYVKAEDQN 184 (817)
Q Consensus 111 ~~~v~E~~~~--gt~v~~v~A~D~D~g~~~~y~l~~~----~~~~~F~Id~~tG~i~~~~~ld~e~~~~y~l~v~a~D~~ 184 (817)
+.+|+||+|+ |+.|++|+|+|+|. .++|+|.+. +..+.|.|++.||+|+++++||||....|.|+|+|+|+|
T Consensus 6 ~~~V~En~~~~~g~~v~~v~A~D~D~--~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D~g 83 (99)
T 3k6d_A 6 SISIPENQRIPFPKIVGRVVVSDRIP--GSKIKLYGKGVDQEPKGIFKINENSGEVSVTKALDREAIPSYQLQVETTDEN 83 (99)
T ss_dssp CEEEETTCCSCSSEEEEECBCSSCCT--TCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEECTT
T ss_pred cEEEeCCCCCCCCcEEEEEEEECCCC--cEEEEEecCcCCCCCCCEEEEECCceEEEECcCCCcccCceEEEEEEEEECC
Confidence 5669999999 99999999999998 799999752 334799999999999999999999999999999999975
Q ss_pred C
Q psy11097 185 G 185 (817)
Q Consensus 185 g 185 (817)
+
T Consensus 84 ~ 84 (99)
T 3k6d_A 84 G 84 (99)
T ss_dssp C
T ss_pred C
Confidence 4
No 52
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus}
Probab=99.56 E-value=1.8e-14 Score=126.42 Aligned_cols=73 Identities=21% Similarity=0.287 Sum_probs=65.3
Q ss_pred EEEEeccCCC--CceEEEEEeecCCCCccEEEEEEecC----CCCceEEEcceeEEEeccCCCcccccEEEEEEEEEecC
Q psy11097 111 QAVVQLNAPP--NTPVFTLQARDPDSDHNIHYFIVRDR----TGGRFEVDERSGVVRTRGTDPFQLDQEYVLYVKAEDQN 184 (817)
Q Consensus 111 ~~~v~E~~~~--gt~v~~v~A~D~D~g~~~~y~l~~~~----~~~~F~Id~~tG~i~~~~~ld~e~~~~y~l~v~a~D~~ 184 (817)
.++|+||.++ |+.|++|+|+|+|. .++|+|.+.. ..+.|.||+.||+|+++++||||....|.|+|+|+|.|
T Consensus 7 ~~~V~EN~~~~~g~~v~~V~A~D~D~--~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~D~g 84 (100)
T 3k6f_A 7 PILIPENQRQPFPRDVGKVVDSDRPE--GSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDRETIATYQLYVETTDAS 84 (100)
T ss_dssp CEEEETTCCSSSCEEEEECEETTCCT--TCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEEEEEECTT
T ss_pred cEEEeCCCCCCCCcEEEEEEEEcCCC--CEEEEEeCCCCCCCcCCEEEEECCCCEEEECcccCCcCCCEEEEEEEEEECC
Confidence 4569999998 89999999999998 6999998642 34789999999999999999999999999999999975
Q ss_pred C
Q psy11097 185 G 185 (817)
Q Consensus 185 g 185 (817)
+
T Consensus 85 ~ 85 (100)
T 3k6f_A 85 G 85 (100)
T ss_dssp C
T ss_pred C
Confidence 4
No 53
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus}
Probab=99.54 E-value=3.1e-14 Score=124.72 Aligned_cols=73 Identities=19% Similarity=0.224 Sum_probs=64.9
Q ss_pred EEEEeccCCCC--ceEEEEEeecCCCCccEEEEEEecC----CCCceEEEcceeEEEeccCCCcccccEEEEEEEEEecC
Q psy11097 111 QAVVQLNAPPN--TPVFTLQARDPDSDHNIHYFIVRDR----TGGRFEVDERSGVVRTRGTDPFQLDQEYVLYVKAEDQN 184 (817)
Q Consensus 111 ~~~v~E~~~~g--t~v~~v~A~D~D~g~~~~y~l~~~~----~~~~F~Id~~tG~i~~~~~ld~e~~~~y~l~v~a~D~~ 184 (817)
..+|+||.+.| +.|++|+|+|+|. .++|+|.+.+ ..+.|.||+.||+|+++++||||....|.|+|+|+|+|
T Consensus 6 ~~~v~EN~~~g~~~~v~~V~A~D~D~--~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~A~D~g 83 (99)
T 3k6i_A 6 PILIPENQRPPFPRSVGKVIRSEGTE--GAKFRLSGKGVDQDPKGIFRINEISGDVSVTRPLDREAIANYELEVEVTDLS 83 (99)
T ss_dssp CEEEETTCCSSSCEEEEECEETTCCS--SEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEEETT
T ss_pred cEEEeCCCCCCCCeEEEEEEEEcCCC--eEEEEEeCCCCCCCcCCEEEEECCCcEEEECcccCCccCCEEEEEEEEEECC
Confidence 34699999997 8899999999998 7999998532 34789999999999999999999999999999999975
Q ss_pred C
Q psy11097 185 G 185 (817)
Q Consensus 185 g 185 (817)
+
T Consensus 84 ~ 84 (99)
T 3k6i_A 84 G 84 (99)
T ss_dssp S
T ss_pred C
Confidence 4
No 54
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B
Probab=99.47 E-value=9.6e-14 Score=122.84 Aligned_cols=74 Identities=16% Similarity=0.258 Sum_probs=62.5
Q ss_pred EEEEeccCC--CCceEEEEEeecCCCCccEEEEEEecCC----CCceEEEcceeEEEeccCCCcccccEEEEEEEEEecC
Q psy11097 111 QAVVQLNAP--PNTPVFTLQARDPDSDHNIHYFIVRDRT----GGRFEVDERSGVVRTRGTDPFQLDQEYVLYVKAEDQN 184 (817)
Q Consensus 111 ~~~v~E~~~--~gt~v~~v~A~D~D~g~~~~y~l~~~~~----~~~F~Id~~tG~i~~~~~ld~e~~~~y~l~v~a~D~~ 184 (817)
.++|+||+| .|+.|++|.| |.+.+..++|+|.+++. .+.|.||+.||+|+++++||||....|.|+|+|+|+|
T Consensus 10 ~~~V~En~~~~~~~~v~~v~A-d~g~N~~i~Ysi~~~~~~~~~~~~F~Id~~tG~I~~~~~LDrE~~~~y~l~V~A~D~g 88 (105)
T 2omz_B 10 PISCPENEKGPFPKNLVQIKS-NKDKEGKVFYSITGQGADTPPVGVFIIERETGWLKVTEPLDRERIATYTLFSHAVSSN 88 (105)
T ss_dssp CCCEESSCCSSSSEEEEECEE-GGGGSSCCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEEEEEECTT
T ss_pred CEEEeCCCCCCCCcEEEEEEC-CCCCCCeEEEEEeCCCCCCCccCEEEEeCCCCEEEECccCCcCCCCeEEEEEEEEECC
Confidence 345999999 5889999999 44444459999987653 3689999999999999999999999999999999975
Q ss_pred C
Q psy11097 185 G 185 (817)
Q Consensus 185 g 185 (817)
+
T Consensus 89 ~ 89 (105)
T 2omz_B 89 G 89 (105)
T ss_dssp S
T ss_pred C
Confidence 4
No 55
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus}
Probab=99.34 E-value=2.7e-13 Score=119.46 Aligned_cols=98 Identities=18% Similarity=0.213 Sum_probs=76.0
Q ss_pred ceeeEEEeCCCCCCcEEEEEEEEeCCCCCceeEEEeecccCCccEEEEEEeCCCCCCCeEEeCceeEEEeCccCCccccC
Q psy11097 256 QVYTPNVDENAGPNTLVTTVVASDKDGDNVSIISVKAKSFADREIRYTLKAQGQGAGTFNIGPTSGIVKLAKELDFEDLR 335 (817)
Q Consensus 256 ~~y~~~V~En~~~gt~v~~v~A~D~D~~~~~i~~~~~~~~~~~~i~y~l~~~g~~~~~F~Id~~tG~i~~~~~LD~E~~~ 335 (817)
..|..+|+|++++|+.|++| |.|.|.+.. ....++|+|. +++..++|.||+.||.|++.++||||..+
T Consensus 3 ~~~~~~V~E~~~~Gt~Vg~v-a~D~~~~~~----------~~~~~~y~i~-~~~~~~~F~Id~~tG~i~~~~~LDRE~~~ 70 (103)
T 1wuz_A 3 SQIHYSIPEEAKHGTFVGRI-AQDLGLELT----------ELVPRLFRVA-SKDRGDLLEVNLQNGILFVNSRIDREELC 70 (103)
T ss_dssp CEEEEEEESSCCTTCBCCCH-HHHHTCCHH----------HHTTTTBCCB-CSSCSCSEEEETTTTEEEECSCCSHHHHC
T ss_pred eeEEEEEECCCCCCCEEEEE-EeccCCCCc----------ccccEEEEEE-eCCCccEEEEECCeEEEEECCcCcccccc
Confidence 35678999999999999999 999886421 0135789997 35567899999999999999999999863
Q ss_pred C---CeEEEEEEEEEeCCCCceEEEEEEEEEEeeCCC
Q psy11097 336 Q---PHVYSLIVTATEDSGGFSTSVELTIRVTDVNDN 369 (817)
Q Consensus 336 ~---~~~y~l~V~a~d~~g~~~~~~~v~I~V~DvNDn 369 (817)
. ...|.+.|.+. .++ ..+.|.|+|+|+|||
T Consensus 71 ~~~~~~~~~~~v~~~---~p~-~~~~v~I~V~DiNDN 103 (103)
T 1wuz_A 71 GRSAECSIHLEVIVD---RPL-QVFHVEVEVRDINDN 103 (103)
T ss_dssp SSSSSCEEEEEEEET---TTT-EEEEEEEEEECCSCC
T ss_pred CCCCcEEEEEEEEEC---CCC-EEEEEEEEEEEcCCC
Confidence 2 12566666553 233 478999999999998
No 56
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus}
Probab=99.32 E-value=3.3e-13 Score=118.90 Aligned_cols=94 Identities=22% Similarity=0.288 Sum_probs=74.6
Q ss_pred CceeEEecCCCCCceEEEEEEecCCCCCC--ceEEEEEEecCCCCCccEEEecccceEEecccccccCCC----CcEEEE
Q psy11097 576 TYYPKVEEGAPNGSPVIKVHATDEDKGVN--GQVKYSIVQQPNQKGAKFTVDEETGEVVTNKVFDREGDD----GKFVSV 649 (817)
Q Consensus 576 ~~~~~v~En~~~gt~v~~v~A~D~D~g~n--~~v~y~l~~~~~~~~~~F~Id~~tG~i~~~~~lD~E~~~----~~~~~l 649 (817)
.+.++|+|++++|+.|++| |.|+|.+.+ +.++|+|.++. ...+|.||+.||.|++.++||||... ...|.+
T Consensus 4 ~~~~~V~E~~~~Gt~Vg~v-a~D~~~~~~~~~~~~y~i~~~~--~~~~F~Id~~tG~i~~~~~LDRE~~~~~~~~~~~~~ 80 (103)
T 1wuz_A 4 QIHYSIPEEAKHGTFVGRI-AQDLGLELTELVPRLFRVASKD--RGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHL 80 (103)
T ss_dssp EEEEEEESSCCTTCBCCCH-HHHHTCCHHHHTTTTBCCBCSS--CSCSEEEETTTTEEEECSCCSHHHHCSSSSSCEEEE
T ss_pred eEEEEEECCCCCCCEEEEE-EeccCCCCcccccEEEEEEeCC--CccEEEEECCeEEEEECCcCccccccCCCCcEEEEE
Confidence 5678899999999999999 999886432 36899998642 34599999999999999999999752 225666
Q ss_pred EEEEEeCCCCCceeEEEEEEEEEecCCC
Q psy11097 650 TIKATDQGEPSLEGVCSFTVEITDVNDN 677 (817)
Q Consensus 650 ~V~a~D~g~p~~s~~~~v~I~V~DvNDn 677 (817)
.|.+. .|. ..+.|.|+|+|+|||
T Consensus 81 ~v~~~---~p~--~~~~v~I~V~DiNDN 103 (103)
T 1wuz_A 81 EVIVD---RPL--QVFHVEVEVRDINDN 103 (103)
T ss_dssp EEEET---TTT--EEEEEEEEEECCSCC
T ss_pred EEEEC---CCC--EEEEEEEEEEEcCCC
Confidence 66552 343 378999999999997
No 57
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=95.28 E-value=1.7 Score=41.84 Aligned_cols=28 Identities=25% Similarity=0.173 Sum_probs=23.2
Q ss_pred eEEEEEEEEEeCCCCceEEEEEEEEEEe
Q psy11097 338 HVYSLIVTATEDSGGFSTSVELTIRVTD 365 (817)
Q Consensus 338 ~~y~l~V~a~d~~g~~~~~~~v~I~V~D 365 (817)
..|+|+++|+|..|..+.+..|.|+|.+
T Consensus 153 G~~tl~a~A~D~aGn~s~s~~vtvtv~~ 180 (190)
T 3pdd_A 153 GNHEISVIAYDDDDAASTPDSVKIFVKQ 180 (190)
T ss_dssp EEEEEEEEEEETTCCBCCCEEEEEEEBC
T ss_pred eeEEEEEEEEECCCCEEecceEEEEECC
Confidence 7899999999988877777778888763
No 58
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=95.19 E-value=0.38 Score=46.46 Aligned_cols=110 Identities=17% Similarity=0.175 Sum_probs=65.0
Q ss_pred eEEEEEEEEEeCCCCceEEEEEEEEEEeeCCCCCcccCCCcceEEeeCC-CC--CC-cEEEEEEEEeCCCCCCceEEEEE
Q psy11097 338 HVYSLIVTATEDSGGFSTSVELTIRVTDVNDNAPKFELPDYQAHNIDED-IT--TG-TSILKVKATDADSGTNAEIEYHV 413 (817)
Q Consensus 338 ~~y~l~V~a~d~~g~~~~~~~v~I~V~DvNDn~P~f~~~~y~~~~V~E~-~~--~G-t~v~~v~A~D~D~g~n~~i~y~i 413 (817)
..|.|+++|+|..|..+.+..+.|+|.+ ..+|.... .-+.+ .. .| ..-+...|+|.|. .-..+.|.+
T Consensus 61 G~htlta~A~D~aGn~s~s~~v~vtV~~--~~~Ptv~i------tsP~~g~~~~~~~~vtl~~~AsD~~g-~V~~Ve~~~ 131 (190)
T 3pdd_A 61 GAYNLKAVAVLSDGRRIESPVTPVLVKV--IVKPTVKL------TAPKSNVVAYGNEFLKITATASDSDG-KISRVDFLV 131 (190)
T ss_dssp EEEEEEEEEEETTSCEEECCCEEEEEEC--CCCCEEEE------EECCTTCCCBTTSEEEEEEEEECSSS-CEEEEEEEE
T ss_pred ccEEEEEEEEECCCCEeeecceeEEecc--CCCCceee------cCCCCCcEEecCCeEEEEEEEECCCC-cEEEEEEEE
Confidence 6899999999877766555568888876 46776531 22222 11 23 4456778888763 234566666
Q ss_pred ecCceEEccceeEEEeeecccCCCCcEEEEEEEEecCCc------eEEEEEEe
Q psy11097 414 SDDNFAVDSNGVINNHKTLDADNNNAYYEFVITAKDKDV------DVELDVVD 460 (817)
Q Consensus 414 ~~~~F~I~~~G~i~~~~~ld~e~~~~~~~l~V~a~D~g~------~v~I~V~d 460 (817)
.+....-+..+-....... ....|.|+++|+|..+ .|.|+|.+
T Consensus 132 dg~~v~t~t~~~y~~~~~~----~~G~~tl~a~A~D~aGn~s~s~~vtvtv~~ 180 (190)
T 3pdd_A 132 DGEVIGSDREAPYEYEWKA----VEGNHEISVIAYDDDDAASTPDSVKIFVKQ 180 (190)
T ss_dssp TTEEEEEECSSSEEEEEEC----CSEEEEEEEEEEETTCCBCCCEEEEEEEBC
T ss_pred CCEEEecccCCCEEEEEec----CCeeEEEEEEEEECCCCEEecceEEEEECC
Confidence 4432222221111111111 2468999999999876 56666654
No 59
>1op4_A Neural-cadherin; beta sandwich, cadherin-like domain, cell adhesion; NMR {Mus musculus} SCOP: b.1.6.1
Probab=92.72 E-value=0.31 Score=45.17 Aligned_cols=80 Identities=23% Similarity=0.435 Sum_probs=65.5
Q ss_pred CCCCcccCCCcceEEeeCCCCCCcEEEEEEEEeCCCCCCceEEEEEecC-ceEEccceeEEEeeecccCCCCcEEEEEEE
Q psy11097 368 DNAPKFELPDYQAHNIDEDITTGTSILKVKATDADSGTNAEIEYHVSDD-NFAVDSNGVINNHKTLDADNNNAYYEFVIT 446 (817)
Q Consensus 368 Dn~P~f~~~~y~~~~V~E~~~~Gt~v~~v~A~D~D~g~n~~i~y~i~~~-~F~I~~~G~i~~~~~ld~e~~~~~~~l~V~ 446 (817)
.+.|-|....|. ..++-+...|..+++|.-.|... +..+.|...+. .|.|+.+|.|++++++-.-.. .-.|.|.
T Consensus 31 ~C~pGF~~~~~~-~~vp~~l~~g~~lgkV~F~dC~g--~~~~~~~ssDp~dFkV~~DGtVya~r~v~L~~~--~~~F~V~ 105 (159)
T 1op4_A 31 LCKTGFPEDVYS-AVLPKDVHEGQPLLNVKFSNCNR--KRKVQYESSEPADFKVDEDGTVYAVRSFPLTAE--QAKFLIY 105 (159)
T ss_dssp CCCCBCCSCEEE-ECCCCSSCSSCCEEECCCBCCSS--CCCEEEECCCSSEEEEETTTEEEEESCCSCSSS--CEEEEEE
T ss_pred cccCCcCcceeE-EeccccccCCceeceeecccCCC--CCceeEEcCCCCCeEEeCCCcEEEecceeecCC--CcEEEEE
Confidence 368999999994 46888889999999999998863 56788999887 999999999999999765443 2478899
Q ss_pred EecCCc
Q psy11097 447 AKDKDV 452 (817)
Q Consensus 447 a~D~g~ 452 (817)
|.|...
T Consensus 106 a~D~~t 111 (159)
T 1op4_A 106 AQDKET 111 (159)
T ss_dssp EEETTT
T ss_pred EEcCCC
Confidence 999543
No 60
>3rb5_A Na/Ca exchange protein; CBD12, calcium binding and regulation, metal binding protein; 2.35A {Drosophila melanogaster} PDB: 3rb7_A 3e9u_A
Probab=92.40 E-value=8.2 Score=39.84 Aligned_cols=165 Identities=18% Similarity=0.168 Sum_probs=79.6
Q ss_pred CCCCCccccCCCceeEEecCCCCCceEEEEEEecCCCCCCceEEEEEEecCCCCCccEEEecccceEEec----------
Q psy11097 565 NDNKPVFRECSTYYPKVEEGAPNGSPVIKVHATDEDKGVNGQVKYSIVQQPNQKGAKFTVDEETGEVVTN---------- 634 (817)
Q Consensus 565 NDn~P~f~~~~~~~~~v~En~~~gt~v~~v~A~D~D~g~n~~v~y~l~~~~~~~~~~F~Id~~tG~i~~~---------- 634 (817)
+|+++.|.- ..-...|.|+. |+.-.+|.-+- +......|.|+...+....+.-|. +.+|.|...
T Consensus 6 dd~~g~i~F-~~~~y~V~E~~--g~v~vtV~R~g-~~~~~vtV~y~T~~GTA~ag~Dy~--~~~gtl~F~~Get~kti~V 79 (298)
T 3rb5_A 6 ADDPIRMYF-EPGHYTVMENC--GEFEVRVVRRG-DISTYASVEYETQDGTASAGTDFV--GRKGLLSFPPGVDEQRFRI 79 (298)
T ss_dssp -----CEEE-SSSEEEEETTS--CCEECCEEECS-CCSSCEEEEEEEEESSSCBTTTBC--CCEEEEEECTTCCEECCEE
T ss_pred CCCceEEEE-eCCEEEEecCc--eEEEEEEEEEC-CCCccEEEEEEeeCCccCCCCCcc--ccceEEEECCCceEEEEEE
Confidence 455666654 34456799986 55555555443 333345788988776433333443 123444322
Q ss_pred ccccccCC-CCcEEEEEEEEEeC-CCCCceeEEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeCCCCC
Q psy11097 635 KVFDREGD-DGKFVSVTIKATDQ-GEPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDASIGTNILRVSASDEDADN 712 (817)
Q Consensus 635 ~~lD~E~~-~~~~~~l~V~a~D~-g~p~~s~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~D~g~ 712 (817)
..+|-... ... .|.|..+.. +...+......+|+|.| ||++|.|.-..-...|.|+. |.....|.-.-. ...
T Consensus 80 ~I~dD~~~E~dE--tF~v~Ls~p~~~a~lg~~~~atvtI~d-dD~~g~~~f~~~~~~V~E~~--g~~~~~V~Rs~~-~~g 153 (298)
T 3rb5_A 80 EVIDDDVFEEDE--CFYIRLFNPSEGVKLAVPMIATVMILD-DDHAGIFAFTDSVFEITESV--GRFELKVMRYSG-ARG 153 (298)
T ss_dssp CBCCCSSCCCCE--EEEEEEECCCTTCCBCSCSEEEEEEEC-CCCCCEEECSCSEEEECTTC--CCEEEEEEEESC-CCS
T ss_pred EEeCCCCccCcE--EEEEEEeCCCCCcEECCCceEEEEEec-cccccccccccccEEeecCC--ceEEEEEEEEec-CCC
Confidence 12222211 112 444555542 22233333455666777 67789875444445888875 666666665433 222
Q ss_pred CceEEEEEecCcCCCCCcceEEeCCeeEEEEe
Q psy11097 713 NGAIVYTLSAPYNQMDLEYFEIQPESGWIVLK 744 (817)
Q Consensus 713 n~~i~Y~l~~~~~~~~~~~F~Id~~tG~i~~~ 744 (817)
.-.+.|+...+..... .-| .+.+|.|+..
T Consensus 154 ~vtV~~~T~dGTA~~g-~Dy--~~~~gtltF~ 182 (298)
T 3rb5_A 154 TVIVPYWTENDTATES-KDY--EGARGELVFE 182 (298)
T ss_dssp CEEEEEEEEEC------CCS--CCCEEEEEEC
T ss_pred CEEEEEEecCCccCCC-ccc--eecccEEEEC
Confidence 3356787655432211 122 2356666543
No 61
>3rb5_A Na/Ca exchange protein; CBD12, calcium binding and regulation, metal binding protein; 2.35A {Drosophila melanogaster} PDB: 3rb7_A 3e9u_A
Probab=88.66 E-value=12 Score=38.55 Aligned_cols=144 Identities=19% Similarity=0.261 Sum_probs=68.7
Q ss_pred CCCCCcCcCceeeEEEeCCCCCCcEEEEEEEEeCCCCCceeEEEeecccCCccEEEEEEeCCCC-C-CCeEEeCceeEEE
Q psy11097 247 NDEEPKFSQQVYTPNVDENAGPNTLVTTVVASDKDGDNVSIISVKAKSFADREIRYTLKAQGQG-A-GTFNIGPTSGIVK 324 (817)
Q Consensus 247 NDn~P~f~~~~y~~~V~En~~~gt~v~~v~A~D~D~~~~~i~~~~~~~~~~~~i~y~l~~~g~~-~-~~F~Id~~tG~i~ 324 (817)
+|+++.|.-..-...|.|+. |++-.+|.-+..-.+ ...+.|.... |.+ . .-|. +.+|.|.
T Consensus 6 dd~~g~i~F~~~~y~V~E~~--g~v~vtV~R~g~~~~-------------~vtV~y~T~~-GTA~ag~Dy~--~~~gtl~ 67 (298)
T 3rb5_A 6 ADDPIRMYFEPGHYTVMENC--GEFEVRVVRRGDIST-------------YASVEYETQD-GTASAGTDFV--GRKGLLS 67 (298)
T ss_dssp -----CEEESSSEEEEETTS--CCEECCEEECSCCSS-------------CEEEEEEEEE-SSSCBTTTBC--CCEEEEE
T ss_pred CCCceEEEEeCCEEEEecCc--eEEEEEEEEECCCCc-------------cEEEEEEeeC-CccCCCCCcc--ccceEEE
Confidence 45666665555567899986 555555544332121 2346776553 221 1 2232 2345554
Q ss_pred eCc----------cCCccccCCCeEEEEEEEEEeCC-C-CceEEEEEEEEEEeeCCCCCcccCCCcceEEeeCCCCCCcE
Q psy11097 325 LAK----------ELDFEDLRQPHVYSLIVTATEDS-G-GFSTSVELTIRVTDVNDNAPKFELPDYQAHNIDEDITTGTS 392 (817)
Q Consensus 325 ~~~----------~LD~E~~~~~~~y~l~V~a~d~~-g-~~~~~~~v~I~V~DvNDn~P~f~~~~y~~~~V~E~~~~Gt~ 392 (817)
... -+|-........|.+.+ +... + .+......+|+|.| ||++|.|.-..-.. .|.|+. |..
T Consensus 68 F~~Get~kti~V~I~dD~~~E~dEtF~v~L--s~p~~~a~lg~~~~atvtI~d-dD~~g~~~f~~~~~-~V~E~~--g~~ 141 (298)
T 3rb5_A 68 FPPGVDEQRFRIEVIDDDVFEEDECFYIRL--FNPSEGVKLAVPMIATVMILD-DDHAGIFAFTDSVF-EITESV--GRF 141 (298)
T ss_dssp ECTTCCEECCEECBCCCSSCCCCEEEEEEE--ECCCTTCCBCSCSEEEEEEEC-CCCCCEEECSCSEE-EECTTC--CCE
T ss_pred ECCCceEEEEEEEEeCCCCccCcEEEEEEE--eCCCCCcEECCCceEEEEEec-cccccccccccccE-EeecCC--ceE
Confidence 331 12222211224444444 4322 2 23333345667776 67789875544332 689975 666
Q ss_pred EEEEEEEeCCCCCCceEEEEEec
Q psy11097 393 ILKVKATDADSGTNAEIEYHVSD 415 (817)
Q Consensus 393 v~~v~A~D~D~g~n~~i~y~i~~ 415 (817)
...|.-+-.-. ..-.+.|...+
T Consensus 142 ~~~V~Rs~~~~-g~vtV~~~T~d 163 (298)
T 3rb5_A 142 ELKVMRYSGAR-GTVIVPYWTEN 163 (298)
T ss_dssp EEEEEEESCCC-SCEEEEEEEEE
T ss_pred EEEEEEEecCC-CCEEEEEEecC
Confidence 66665544322 23456676544
No 62
>2yhg_A SDE_182CT, cellulose-binding protein; hydrolase, glycoside hydrolase; HET: BTB; 1.08A {Saccharophagus degradans}
Probab=88.10 E-value=2.2 Score=46.19 Aligned_cols=69 Identities=16% Similarity=0.311 Sum_probs=46.3
Q ss_pred ecCCCCCCceEEEEEEecCCC--CCccEEEe-cccceEEecccccccCCCCcEEEEEEEEEeCCCCCceeEEEEEEEE
Q psy11097 597 TDEDKGVNGQVKYSIVQQPNQ--KGAKFTVD-EETGEVVTNKVFDREGDDGKFVSVTIKATDQGEPSLEGVCSFTVEI 671 (817)
Q Consensus 597 ~D~D~g~n~~v~y~l~~~~~~--~~~~F~Id-~~tG~i~~~~~lD~E~~~~~~~~l~V~a~D~g~p~~s~~~~v~I~V 671 (817)
+|+| +..++|+-..-.+. ......|. +.+..+....+-+- . ...|.|+++++|++.|++++..+|.|+|
T Consensus 365 sDPD---GD~LtY~W~q~~g~g~~~~~vtls~~~~~~~sft~P~~~-~--~~tl~f~LtVTD~~~p~lTs~~rViVtV 436 (437)
T 2yhg_A 365 SDPD---GDSLNYSWSHYGEADSYSGSVSISNSSSASANVQIPSNA-G--GKDIHILLTLRDNGSPNLYAYRRVVINV 436 (437)
T ss_dssp BCTT---CCCEEEEEEECTTTSSCCSCCCEETTTSSEEEEECCTTC-T--TCEEEEEEEEEECSSSCCEEEEEEEEEE
T ss_pred eCCC---CCeEEEEEEEeCCCCccccceEeecCCCceEEEEeCCCC-C--CcEEEEEEEEEeCCCCCccEEeEEEEEe
Confidence 4888 34688888754322 11245564 34445655555442 2 2469999999999999999999999987
No 63
>1op4_A Neural-cadherin; beta sandwich, cadherin-like domain, cell adhesion; NMR {Mus musculus} SCOP: b.1.6.1
Probab=81.49 E-value=4.5 Score=37.35 Aligned_cols=92 Identities=13% Similarity=0.237 Sum_probs=64.8
Q ss_pred CCCCcCcCceeeEEEeCCCCCCcEEEEEEEEeCCCCCceeEEEeecccCCccEEEEEEeCCCCCCCeEEeCceeEEEeCc
Q psy11097 248 DEEPKFSQQVYTPNVDENAGPNTLVTTVVASDKDGDNVSIISVKAKSFADREIRYTLKAQGQGAGTFNIGPTSGIVKLAK 327 (817)
Q Consensus 248 Dn~P~f~~~~y~~~V~En~~~gt~v~~v~A~D~D~~~~~i~~~~~~~~~~~~i~y~l~~~g~~~~~F~Id~~tG~i~~~~ 327 (817)
..-|-|.+..|...++-+...|..+++|.-.|-.+. ..+.|.-. ....|.|+++ |.|++.+
T Consensus 31 ~C~pGF~~~~~~~~vp~~l~~g~~lgkV~F~dC~g~--------------~~~~~~ss----Dp~dFkV~~D-GtVya~r 91 (159)
T 1op4_A 31 LCKTGFPEDVYSAVLPKDVHEGQPLLNVKFSNCNRK--------------RKVQYESS----EPADFKVDED-GTVYAVR 91 (159)
T ss_dssp CCCCBCCSCEEEECCCCSSCSSCCEEECCCBCCSSC--------------CCEEEECC----CSSEEEEETT-TEEEEES
T ss_pred cccCCcCcceeEEeccccccCCceeceeecccCCCC--------------CceeEEcC----CCCCeEEeCC-CcEEEec
Confidence 357999999998888899999999999998888644 45666542 2237999985 9999998
Q ss_pred cCCccccCCCeEEEEEEEEEeCCCCceEEEEEEEE
Q psy11097 328 ELDFEDLRQPHVYSLIVTATEDSGGFSTSVELTIR 362 (817)
Q Consensus 328 ~LD~E~~~~~~~y~l~V~a~d~~g~~~~~~~v~I~ 362 (817)
++-.-. ..-.+.|.|.|...+..-.+.|.+.
T Consensus 92 ~v~L~~----~~~~F~V~a~D~~t~~~~~i~V~L~ 122 (159)
T 1op4_A 92 SFPLTA----EQAKFLIYAQDKETQEKWQVAVNLS 122 (159)
T ss_dssp CCSCSS----SCEEEEEEEEETTTTEEEEEEEEEC
T ss_pred ceeecC----CCcEEEEEEEcCCCceEEEEEEEEe
Confidence 864322 1236778888744444444444433
No 64
>3us9_A Sodium/calcium exchanger 1; beta-sandwich, calcium binding protein, intracellular, metal protein; 2.68A {Canis lupus familiaris} PDB: 2klt_A
Probab=80.36 E-value=55 Score=33.48 Aligned_cols=179 Identities=17% Similarity=0.212 Sum_probs=89.0
Q ss_pred eeEEecCCCCCceEEEEEEecCCCCCCceEEEEEEecCCCCCccEEEecccceEEec----------ccccccCC-CCcE
Q psy11097 578 YPKVEEGAPNGSPVIKVHATDEDKGVNGQVKYSIVQQPNQKGAKFTVDEETGEVVTN----------KVFDREGD-DGKF 646 (817)
Q Consensus 578 ~~~v~En~~~gt~v~~v~A~D~D~g~n~~v~y~l~~~~~~~~~~F~Id~~tG~i~~~----------~~lD~E~~-~~~~ 646 (817)
...|.|+. |+.-.+|.-+..+.+....|.|+...+....+..|.- .+|.|... ..+|-... ...
T Consensus 18 ~y~V~E~~--G~v~vtV~R~gG~~~~~v~V~y~T~dGTA~~g~Dy~~--~~gtl~F~~Get~kti~V~IidD~~~E~~E- 92 (295)
T 3us9_A 18 TYQCLENC--GTVALTIIRRGGDLTNTVFVDFRTEDGTANAGSDYEF--TEGTVVFKPGETQKEIRVGIIDDDIFEEDK- 92 (295)
T ss_dssp EEEEEGGG--SCEEEEEEEEESSCCSCEEEEEEEEESSSCBTTTBCC--CCEEEEECSSCCEEEEEECCCCCSSCCCCE-
T ss_pred eEEEecCc--eEEEEEEEEecCCCCceEEEEEEeeCCcccCCcCccc--cceEEEECCCceEEEEEEEEeCCCcccCce-
Confidence 44589987 5666666655534433457899887764333333421 23433221 22332221 123
Q ss_pred EEEEEEEEeCC------------------CCCceeEEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCcEEEEEEEEeC
Q psy11097 647 VSVTIKATDQG------------------EPSLEGVCSFTVEITDVNDNPPLFDRQKYVENVKQDASIGTNILRVSASDE 708 (817)
Q Consensus 647 ~~l~V~a~D~g------------------~p~~s~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~g~~v~~v~A~D~ 708 (817)
.|.|..+... .+.+......+|+|.| ||++|.|.-..-...|.|+. |....+|.-+-.
T Consensus 93 -tF~v~Ls~~~~~~~~~~d~~~~~~~~~~~a~Lg~~~~atVtI~D-dD~agv~sf~~~~~~V~E~~--G~~~v~V~Rs~~ 168 (295)
T 3us9_A 93 -NFLVHLSNVKVSSEASEDGILEANHVSALACLGSPSTATVTIFD-DDHAGIFTFEEPVTHVSESI--GIMEVKVLRTSG 168 (295)
T ss_dssp -EEEEEEECCCCCCCC-------------CCCCCSCCEEEEEEEC-CCCCCEEEESCSEEEEESCS--SEEEEEEEEESC
T ss_pred -EEEEEEecCccccccccccccccccCCcccccCCCceeEEEEcc-cccccccccCCCeEEEecCC--CeEEEEEEEEcC
Confidence 3444444311 1122222445666676 58889864333345788874 666666654422
Q ss_pred CCCCCceEEEEEecCcCCCCCcceEEeCCeeEEEEeeec---eEEEEEeeCCCCCCcccEEEe
Q psy11097 709 DADNNGAIVYTLSAPYNQMDLEYFEIQPESGWIVLKKPL---DVYYYIVDSPRNEGKDFFEIN 768 (817)
Q Consensus 709 D~g~n~~i~Y~l~~~~~~~~~~~F~Id~~tG~i~~~~~l---d~~y~~~~~~~~~~~~~F~Id 768 (817)
....-.+.|....+.......-|. +.+|.|+....- .+...|+++.-.++...|.|.
T Consensus 169 -~~g~VtV~y~T~~GTA~~g~~DY~--~~sgtLtF~~Get~kti~V~IidD~~~E~dEtF~V~ 228 (295)
T 3us9_A 169 -ARGNVIVPYKTIEGTARGGGEDFE--DTCGELEFQNDEIVKTISVKVIDDEEYEKNKTFFLE 228 (295)
T ss_dssp -CCSCEEEEEEEECCSSCTTTTSEE--CCEEEEEECTTCCCEEEEEEECCCSCCCSCEEEEEE
T ss_pred -CCccEEEEEEecCCCccCCccccc--ccceEEEecCCceEEEEEEEEcCCCCcCCceEEEEE
Confidence 222334678766653322112443 457776654321 144455554444455555553
No 65
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=79.97 E-value=9.4 Score=32.16 Aligned_cols=28 Identities=25% Similarity=0.173 Sum_probs=23.3
Q ss_pred eEEEEEEEEEeCCCCceEEEEEEEEEEe
Q psy11097 338 HVYSLIVTATEDSGGFSTSVELTIRVTD 365 (817)
Q Consensus 338 ~~y~l~V~a~d~~g~~~~~~~v~I~V~D 365 (817)
..|+|+++|+|..|....+..|.|+|.+
T Consensus 61 G~htl~a~AtD~~G~~~tS~~v~vtV~~ 88 (98)
T 3pe9_A 61 GNHEISVIAYDDDDAASTPDSVKIFVKQ 88 (98)
T ss_dssp EEEEEEEEEEETTCCBCCCEEEEEEEEC
T ss_pred ccEEEEEEEEECCCCEEeeeEEEEEECc
Confidence 7899999999988876667788888863
No 66
>2kpn_A Bacillolysin; solution structure, BIG_3 domain, PF07523, PSI BIG-open NESG, cell WALL, hydrolase, peptidoglycan-anchor; NMR {Bacillus cereus atcc 14579}
Probab=79.17 E-value=8.2 Score=32.84 Aligned_cols=68 Identities=16% Similarity=0.215 Sum_probs=39.0
Q ss_pred cCCCCCeeecCCCCeEEEEeccCCCCceEEEEEeecCCCCccEEEEEEecCCCCceEEEcceeEEEeccCCCcccccEEE
Q psy11097 96 VNDESPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDSDHNIHYFIVRDRTGGRFEVDERSGVVRTRGTDPFQLDQEYV 175 (817)
Q Consensus 96 vNDn~P~F~~~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g~~~~y~l~~~~~~~~F~Id~~tG~i~~~~~ld~e~~~~y~ 175 (817)
+-|.+|+|.... ..+|..+..-.- ..-+.|+|...|+ ++ ..|.+.+..|......|.
T Consensus 6 ~~~~~P~It~~~---d~tI~~Gd~fd~-~~gvtA~D~~DGD-lT------------------~~I~V~g~Vdt~k~G~Y~ 62 (103)
T 2kpn_A 6 TSDLEPKLTVPV---GATIHVGDSFVP-MAEVLAIDKEDGD-LT------------------SKIKVDGEVDTTKAGTYV 62 (103)
T ss_dssp CCCCCCEEECCS---EEEEETTCCCCH-HHHCEEECSSSCB-CG------------------GGCEEESCCCSSSCEEEE
T ss_pred cCCCCCEEEeCC---CEEEECCCCccc-ccCcEEEcCCCCC-cc------------------eeEEEeCcccCCCceEEE
Confidence 446889997532 344554322211 1126788876553 11 112223445556668899
Q ss_pred EEEEEEecCCc
Q psy11097 176 LYVKAEDQNGR 186 (817)
Q Consensus 176 l~v~a~D~~g~ 186 (817)
++..++|..|.
T Consensus 63 VtY~VtDs~Gn 73 (103)
T 2kpn_A 63 LTYTVTDSKGH 73 (103)
T ss_dssp EEEEEECTTSC
T ss_pred EEEEEEcCCCC
Confidence 99999998774
No 67
>2kpn_A Bacillolysin; solution structure, BIG_3 domain, PF07523, PSI BIG-open NESG, cell WALL, hydrolase, peptidoglycan-anchor; NMR {Bacillus cereus atcc 14579}
Probab=70.35 E-value=12 Score=31.85 Aligned_cols=40 Identities=28% Similarity=0.326 Sum_probs=29.2
Q ss_pred ccCCccccCCCeEEEEEEEEEeCCCCceEEEEEEEEEEeeCCCC
Q psy11097 327 KELDFEDLRQPHVYSLIVTATEDSGGFSTSVELTIRVTDVNDNA 370 (817)
Q Consensus 327 ~~LD~E~~~~~~~y~l~V~a~d~~g~~~~~~~v~I~V~DvNDn~ 370 (817)
+..|... ...|.++..++ |..|..++++.+|+|.+..+..
T Consensus 51 g~Vdt~k---~G~Y~VtY~Vt-Ds~Gn~~t~trtVtV~~~~e~~ 90 (103)
T 2kpn_A 51 GEVDTTK---AGTYVLTYTVT-DSKGHEVTAKQTVTVKVREEVK 90 (103)
T ss_dssp SCCCSSS---CEEEEEEEEEE-CTTSCEEEEEEEEEEECSSCCC
T ss_pred CcccCCC---ceEEEEEEEEE-cCCCCEEEEEEEEEEeCCCccc
Confidence 4456554 37899999999 4556677788999998755443
No 68
>2yhg_A SDE_182CT, cellulose-binding protein; hydrolase, glycoside hydrolase; HET: BTB; 1.08A {Saccharophagus degradans}
Probab=70.09 E-value=19 Score=38.87 Aligned_cols=63 Identities=16% Similarity=0.278 Sum_probs=39.2
Q ss_pred CCCceEEEEEe---ecCCCCccEEEEEEecCCC----CceEEE-cceeEEEeccCCCcccccEEEEEEEEEecC
Q psy11097 119 PPNTPVFTLQA---RDPDSDHNIHYFIVRDRTG----GRFEVD-ERSGVVRTRGTDPFQLDQEYVLYVKAEDQN 184 (817)
Q Consensus 119 ~~gt~v~~v~A---~D~D~g~~~~y~l~~~~~~----~~F~Id-~~tG~i~~~~~ld~e~~~~y~l~v~a~D~~ 184 (817)
.+|..| ++.| +|+| |+.++|....-... +...|. +.+..++++.+.+ +....|.|.++|+|.+
T Consensus 352 ~aG~tV-tLdAs~SsDPD-GD~LtY~W~q~~g~g~~~~~vtls~~~~~~~sft~P~~-~~~~tl~f~LtVTD~~ 422 (437)
T 2yhg_A 352 SAGSTV-SLDASGSSDPD-GDSLNYSWSHYGEADSYSGSVSISNSSSASANVQIPSN-AGGKDIHILLTLRDNG 422 (437)
T ss_dssp CTTCEE-EEECTTCBCTT-CCCEEEEEEECTTTSSCCSCCCEETTTSSEEEEECCTT-CTTCEEEEEEEEEECS
T ss_pred cCCCEE-EEEeeeeeCCC-CCeEEEEEEEeCCCCccccceEeecCCCceEEEEeCCC-CCCcEEEEEEEEEeCC
Confidence 456654 4444 4998 77799888643322 245564 4445666655433 3456799999999964
No 69
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=62.06 E-value=40 Score=28.22 Aligned_cols=66 Identities=17% Similarity=0.214 Sum_probs=39.5
Q ss_pred CcEEEEEEEEeCCCCCCceEEEEEecCceEEccceeEEEeeecccCCCCcEEEEEEEEecCCc------eEEEEEEe
Q psy11097 390 GTSILKVKATDADSGTNAEIEYHVSDDNFAVDSNGVINNHKTLDADNNNAYYEFVITAKDKDV------DVELDVVD 460 (817)
Q Consensus 390 Gt~v~~v~A~D~D~g~n~~i~y~i~~~~F~I~~~G~i~~~~~ld~e~~~~~~~l~V~a~D~g~------~v~I~V~d 460 (817)
+.+.....|.|.|. .-.++.|.+.+....-+..--.. +.+......|.|.++|+|..+ .|.|+|.+
T Consensus 17 ~~v~i~a~A~D~dg-~V~kVef~vdg~~vg~dt~apy~----~~w~~~~G~htl~a~AtD~~G~~~tS~~v~vtV~~ 88 (98)
T 3pe9_A 17 EFLKITATASDSDG-KISRVDFLVDGEVIGSDREAPYE----YEWKAVEGNHEISVIAYDDDDAASTPDSVKIFVKQ 88 (98)
T ss_dssp SEEEEEEEECCSSS-CEEEEEEEETTEEEEEECSSSEE----EEEECCSEEEEEEEEEEETTCCBCCCEEEEEEEEC
T ss_pred CEEEEEEEEEeCCC-CEEEEEEEECCEEecccccCCEE----EEEEcCCccEEEEEEEEECCCCEEeeeEEEEEECc
Confidence 34567788888874 34578888765433333211001 111111368999999999877 57777764
No 70
>3ead_A Na/Ca exchange protein; CBD1, calcium regulation, membrane, transmembrane, membrane; 2.25A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=60.09 E-value=50 Score=29.43 Aligned_cols=46 Identities=15% Similarity=0.075 Sum_probs=24.4
Q ss_pred CCCccccCCCceeEEecCCCCCceEEEEEEecCCCCCCceEEEEEEecCC
Q psy11097 567 NKPVFRECSTYYPKVEEGAPNGSPVIKVHATDEDKGVNGQVKYSIVQQPN 616 (817)
Q Consensus 567 n~P~f~~~~~~~~~v~En~~~gt~v~~v~A~D~D~g~n~~v~y~l~~~~~ 616 (817)
+.+.+.- ..-...|.|+. |+.-.+|.-.- +......+.|+...+..
T Consensus 3 ~~~~i~F-~~~~y~V~E~~--g~~~v~V~R~g-~~~~~v~V~y~t~~gTA 48 (137)
T 3ead_A 3 DPIRMYF-EPGHYTVMENC--GEFEVRVVRRG-DISTYASVEYETQDGTA 48 (137)
T ss_dssp --CEEEE-SSCEEEEEGGG--CEEEEEEEEES-CCSSCEEEEEEEECSSS
T ss_pred CCEEEEE-cCCEEEEECCC--eEEEEEEEEEC-CCCceEEEEEEeECCCc
Confidence 3444333 23355688975 55555554443 33334578888876643
No 71
>3gin_A Sodium/calcium exchanger 1; CBD1, CBD2, NCX, calcium binding domain 1, antiport, calcium transport, calmodulin-binding, cell membrane; 2.40A {Canis lupus familiaris} PDB: 2dpk_A* 2fws_A
Probab=57.33 E-value=52 Score=30.28 Aligned_cols=105 Identities=14% Similarity=0.123 Sum_probs=47.7
Q ss_pred eEEEEEEEeecCCCCCccccCCCceeEEecCCCCCceEEEEEEecCCCCCCceEEEEEEecCCCCCccEEEecccceEEe
Q psy11097 554 TAVVVVFITDVNDNKPVFRECSTYYPKVEEGAPNGSPVIKVHATDEDKGVNGQVKYSIVQQPNQKGAKFTVDEETGEVVT 633 (817)
Q Consensus 554 ~~~v~I~V~DvNDn~P~f~~~~~~~~~v~En~~~gt~v~~v~A~D~D~g~n~~v~y~l~~~~~~~~~~F~Id~~tG~i~~ 633 (817)
.+-+.+.|.|- |..+.|.- ..-...|.|+. |+.-.+|.-+-.+.+....|.|+...+....+.-|.- ..|.|..
T Consensus 9 ~~~~~~~i~dd-d~~g~i~F-~~~~y~V~E~~--G~v~vtV~R~~G~~~~~v~V~y~T~dGTA~~g~Dy~~--~~gtl~F 82 (160)
T 3gin_A 9 SAALEVLFQGP-GPVSKIFF-EQGTYQCLENC--GTVALTIIRRGGDLTNTVFVDFRTEDGTANAGSDYEF--TEGTVVF 82 (160)
T ss_dssp -------------CEEEEEE-SCSEEEEETTS--SEEEEEEEEESSCTTSCEEEEEEEEESSSCBTTTBCC--CEEEEEE
T ss_pred cceEEEEEecC-CCccEEEE-eCCEEEEEcCc--EEEEEEEEEccCCCCcEEEEEEEEECCcccCCCCccc--cceEEEE
Confidence 34566777764 44666554 34455689986 5555665555444333457899988765433334432 3455544
Q ss_pred cccccccCCCCcEEEEEEEEEeCCCCCceeEEEEEEEEEe
Q psy11097 634 NKVFDREGDDGKFVSVTIKATDQGEPSLEGVCSFTVEITD 673 (817)
Q Consensus 634 ~~~lD~E~~~~~~~~l~V~a~D~g~p~~s~~~~v~I~V~D 673 (817)
... |. .-.++|...|...+ ...-++.|.+.+
T Consensus 83 ~~G---et----~k~i~V~IidD~~~--E~~EtF~v~Ls~ 113 (160)
T 3gin_A 83 KPG---ET----QKEIRVGIIDDDIF--EEDKNFLVHLSN 113 (160)
T ss_dssp CTT---CC----EEEEEEEBCCCSCC--CCCEEEEEEEEE
T ss_pred cCC---cE----EEEEEEEEECCCCc--cCceEEEEEECC
Confidence 321 21 12445555554433 223445555553
No 72
>3gin_A Sodium/calcium exchanger 1; CBD1, CBD2, NCX, calcium binding domain 1, antiport, calcium transport, calmodulin-binding, cell membrane; 2.40A {Canis lupus familiaris} PDB: 2dpk_A* 2fws_A
Probab=53.10 E-value=1.2e+02 Score=27.74 Aligned_cols=71 Identities=11% Similarity=0.082 Sum_probs=33.2
Q ss_pred eEEEEEEEEecCCCCCeeecCCCCeEEEEeccCCCCceEEEEEeecCCCCc--cEEEEEEecCCC--CceEEEcceeEEE
Q psy11097 86 NQRVIIHVKDVNDESPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDSDH--NIHYFIVRDRTG--GRFEVDERSGVVR 161 (817)
Q Consensus 86 ~~~v~I~V~DvNDn~P~F~~~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g~--~~~y~l~~~~~~--~~F~Id~~tG~i~ 161 (817)
++.+.+.|.|- |.++.|.-.+..| +|.|+. |+.-++|.-.-.+.+. .+.|....+.+. .-|. +..|.|.
T Consensus 9 ~~~~~~~i~dd-d~~g~i~F~~~~y--~V~E~~--G~v~vtV~R~~G~~~~~v~V~y~T~dGTA~~g~Dy~--~~~gtl~ 81 (160)
T 3gin_A 9 SAALEVLFQGP-GPVSKIFFEQGTY--QCLENC--GTVALTIIRRGGDLTNTVFVDFRTEDGTANAGSDYE--FTEGTVV 81 (160)
T ss_dssp -------------CEEEEEESCSEE--EEETTS--SEEEEEEEEESSCTTSCEEEEEEEEESSSCBTTTBC--CCEEEEE
T ss_pred cceEEEEEecC-CCccEEEEeCCEE--EEEcCc--EEEEEEEEEccCCCCcEEEEEEEEECCcccCCCCcc--ccceEEE
Confidence 35567777774 4677777555434 488974 6666666555444322 377887765432 2232 2355555
Q ss_pred ec
Q psy11097 162 TR 163 (817)
Q Consensus 162 ~~ 163 (817)
..
T Consensus 82 F~ 83 (160)
T 3gin_A 82 FK 83 (160)
T ss_dssp EC
T ss_pred Ec
Confidence 43
No 73
>2yrl_A KIAA1837 protein; PKD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=52.44 E-value=26 Score=29.60 Aligned_cols=29 Identities=10% Similarity=0.288 Sum_probs=24.4
Q ss_pred eEEEEEEEEEeCCCCceEEEEEEEEEEeeC
Q psy11097 338 HVYSLIVTATEDSGGFSTSVELTIRVTDVN 367 (817)
Q Consensus 338 ~~y~l~V~a~d~~g~~~~~~~v~I~V~DvN 367 (817)
..|.|+++++| ..+.+++..+.|+|...+
T Consensus 69 G~y~f~LTVtD-~~G~s~s~~v~VtV~~~~ 97 (102)
T 2yrl_A 69 GTYVFTLTVKD-ERNLQSQSSVNVIVKEES 97 (102)
T ss_dssp SEEEEEEEEEB-TTCCEEEEEEEEEEECCS
T ss_pred eEEEEEEEEEe-CCCCEEEeEEEEEEcCCC
Confidence 68999999995 456788899999999876
No 74
>2yrl_A KIAA1837 protein; PKD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=48.02 E-value=26 Score=29.53 Aligned_cols=31 Identities=16% Similarity=0.274 Sum_probs=25.5
Q ss_pred cccEEEEEEEEeCCccccCCCCCcceeeEEEEEEEeecCC
Q psy11097 527 RDKYELNVTAVDDGACCANGDQSVHTATAVVVVFITDVND 566 (817)
Q Consensus 527 ~e~y~l~V~a~D~~~~~~~~~~~~~~~~~~v~I~V~DvND 566 (817)
...|.|+++++|..+ .+++..+.|+|...+.
T Consensus 68 ~G~y~f~LTVtD~~G---------~s~s~~v~VtV~~~~~ 98 (102)
T 2yrl_A 68 VGTYVFTLTVKDERN---------LQSQSSVNVIVKEESG 98 (102)
T ss_dssp SSEEEEEEEEEBTTC---------CEEEEEEEEEEECCSS
T ss_pred CeEEEEEEEEEeCCC---------CEEEeEEEEEEcCCCC
Confidence 358999999999876 5788899999987654
No 75
>1u2c_A Dystroglycan; IG-like domain, S6 like fold, protein binding; 2.30A {Mus musculus} SCOP: b.1.6.2 d.272.1.1
Probab=39.91 E-value=1.3e+02 Score=29.48 Aligned_cols=66 Identities=12% Similarity=0.133 Sum_probs=43.0
Q ss_pred EEEEEEec-CCCCCccEEEecccceEEecccccccCCCCcEEEEEEEEEeC---CCCCceeEEEEEEEEE--ecCC
Q psy11097 607 VKYSIVQQ-PNQKGAKFTVDEETGEVVTNKVFDREGDDGKFVSVTIKATDQ---GEPSLEGVCSFTVEIT--DVND 676 (817)
Q Consensus 607 v~y~l~~~-~~~~~~~F~Id~~tG~i~~~~~lD~E~~~~~~~~l~V~a~D~---g~p~~s~~~~v~I~V~--DvND 676 (817)
.+|++... .....+|...|+.++.+.- -+++... ..|.+.|+|++. |.....++..+.|.|. |.||
T Consensus 33 ~~y~vt~a~g~~LPsWL~fd~~t~TfsG-~P~~~D~---G~~~i~VtA~~~~~~g~~~~~asdvF~I~V~ped~~e 104 (246)
T 1u2c_A 33 EIIKVSAAGKEALPSWLHWDPHSHILEG-LPLDTDK---GVHYISVSAARLGANGSHVPQTSSVFSIEVYPEDHNE 104 (246)
T ss_dssp EEEEEEETTSSSCCTTEEEETTTTEEEE-CCCGGGC---EEEEEEEEEEEECTTSCEEEEEEEEEEEEEESSCCC-
T ss_pred cEEEEEecCCCCCCcceEEcCCCCeEEe-ccCCCCc---ceEEEEEEEeeccCCCCccccccceEEEEEecCCCcc
Confidence 35555432 2334569999999996543 4555554 569999999854 4434456678889998 6666
No 76
>3ead_A Na/Ca exchange protein; CBD1, calcium regulation, membrane, transmembrane, membrane; 2.25A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=35.00 E-value=2.4e+02 Score=24.88 Aligned_cols=113 Identities=19% Similarity=0.230 Sum_probs=44.1
Q ss_pred CCCCeeecCCCCeEEEEeccCCCCceEEEEEee-cCCCCccEEEEEEecCCC--CceEEEcceeEEEecc----------
Q psy11097 98 DESPYFINRPLPMQAVVQLNAPPNTPVFTLQAR-DPDSDHNIHYFIVRDRTG--GRFEVDERSGVVRTRG---------- 164 (817)
Q Consensus 98 Dn~P~F~~~~~~~~~~v~E~~~~gt~v~~v~A~-D~D~g~~~~y~l~~~~~~--~~F~Id~~tG~i~~~~---------- 164 (817)
|+++.+.-.+..| +|.|+. |+.-++|.-. +.+..-.+.|....+.+. .-|. +.+|.|....
T Consensus 2 d~~~~i~F~~~~y--~V~E~~--g~~~v~V~R~g~~~~~v~V~y~t~~gTA~~g~Dy~--~~~g~l~F~~Get~k~i~V~ 75 (137)
T 3ead_A 2 DDPIRMYFEPGHY--TVMENC--GEFEVRVVRRGDISTYASVEYETQDGTASAGTDFV--GRKGLLSFPPGVDEQRFRIE 75 (137)
T ss_dssp ---CEEEESSCEE--EEEGGG--CEEEEEEEEESCCSSCEEEEEEEECSSSCBTTTBC--CCEEEEEECTTCCEEEEEEE
T ss_pred CCCEEEEEcCCEE--EEECCC--eEEEEEEEEECCCCceEEEEEEeECCCcCCCCcEe--EeeEEEEECCCceEEEEEEE
Confidence 5566655444333 488975 6666666544 222222377877655432 1232 2245444332
Q ss_pred ---CCCcccccEEEEEEEEEec-CCcccccccccCccEEEEEeCCCCCCeeeccceEEEecc
Q psy11097 165 ---TDPFQLDQEYVLYVKAEDQ-NGRKDERKFQSTPEERLSIVGGKRAPQFYMPSYEAEIPE 222 (817)
Q Consensus 165 ---~ld~e~~~~y~l~v~a~D~-~g~~~~~~~~~~~~~~~~i~~~~~~p~f~~~~y~~~i~e 222 (817)
.--+|.+..| .|..+.. +|. .+.......++|.+++.+|.|....=...+.|
T Consensus 76 I~dD~~~E~~E~F--~v~L~~p~~~a----~lg~~~~atvtI~ddD~~g~~~f~~~~~~V~E 131 (137)
T 3ead_A 76 VIDDDVFEEDECF--YIRLFNPSEGV----KLAVPMIATVMILDDDHAGIFAFTDSVFEITE 131 (137)
T ss_dssp BCCCSSCCCCEEE--EEEEECCCTTC----EECSCSEEEEEEECCC----------------
T ss_pred EecCCcccCcEEE--EEEEECCCCCc----EECCCcEEEEEEECCCCCCEEEECCCcEEEec
Confidence 1112333334 3444443 221 12222356788888888887654433333434
No 77
>1u2c_A Dystroglycan; IG-like domain, S6 like fold, protein binding; 2.30A {Mus musculus} SCOP: b.1.6.2 d.272.1.1
Probab=29.54 E-value=1.6e+02 Score=28.88 Aligned_cols=63 Identities=17% Similarity=0.192 Sum_probs=42.1
Q ss_pred ecCCcccccEEEEccccEEEEcccccccccccEEEEEEEEeCCccccCCCCCcceeeEEEEEEEe--ecCC
Q psy11097 498 VGGSTSSGQFVIEDITGVIRLNSKSISLDRDKYELNVTAVDDGACCANGDQSVHTATAVVVVFIT--DVND 566 (817)
Q Consensus 498 ~~~~~~~~~F~Id~~tG~i~~~~~~~~ld~e~y~l~V~a~D~~~~~~~~~~~~~~~~~~v~I~V~--DvND 566 (817)
.+++.-..|...|+.++.+.-... .-|...|.++|+|++.+.. | ....+++..+.|.|. |.||
T Consensus 40 a~g~~LPsWL~fd~~t~TfsG~P~--~~D~G~~~i~VtA~~~~~~---g-~~~~~asdvF~I~V~ped~~e 104 (246)
T 1u2c_A 40 AGKEALPSWLHWDPHSHILEGLPL--DTDKGVHYISVSAARLGAN---G-SHVPQTSSVFSIEVYPEDHNE 104 (246)
T ss_dssp TTSSSCCTTEEEETTTTEEEECCC--GGGCEEEEEEEEEEEECTT---S-CEEEEEEEEEEEEEESSCCC-
T ss_pred cCCCCCCcceEEcCCCCeEEeccC--CCCcceEEEEEEEeeccCC---C-CccccccceEEEEEecCCCcc
Confidence 345567889999999998877632 4456789999999854210 0 012345667888888 6666
No 78
>2y72_A Collagenase, collagenase G; polycystic kidney disease domain, beta barrel, collagen RECO domain, hydrolase; 1.18A {Clostridium histolyticum} PDB: 3jqu_A 3js7_A
Probab=25.79 E-value=1.1e+02 Score=24.41 Aligned_cols=47 Identities=15% Similarity=0.235 Sum_probs=26.9
Q ss_pred ecCCCCccEEEEEEecCCCCceEEEcceeEEEeccCCCcccccEEEEEEEEEecCCc
Q psy11097 130 RDPDSDHNIHYFIVRDRTGGRFEVDERSGVVRTRGTDPFQLDQEYVLYVKAEDQNGR 186 (817)
Q Consensus 130 ~D~D~g~~~~y~l~~~~~~~~F~Id~~tG~i~~~~~ld~e~~~~y~l~v~a~D~~g~ 186 (817)
.|+| |..+.|....++.. ..- ..+- ..-|.....|.++++++|..|.
T Consensus 27 ~d~~-g~~~~y~W~fgdG~--~s~-~~~~------~hty~~~G~Y~v~LtVtd~~G~ 73 (85)
T 2y72_A 27 KDED-GKIVSYDWDFGDGA--TSR-GKNS------VHAYKKAGTYNVTLKVTDDKGA 73 (85)
T ss_dssp BCTT-SCEEEEEEECSSSC--EEE-SSEE------EEECSSCEEEEEEEEEEETTSC
T ss_pred cCCC-CCEEEEEEEECCCC--ccc-ccce------EEEcCCCeEEEEEEEEEECCCC
Confidence 3444 44578888655332 111 1111 1235566789999999997763
No 79
>3klq_A Putative pilus anchoring protein; CNAB fold, inverse IGG fold, polyproline-II-like helix, cell; 1.90A {Streptococcus pyogenes}
Probab=22.46 E-value=4.1e+02 Score=23.64 Aligned_cols=100 Identities=13% Similarity=0.169 Sum_probs=0.0
Q ss_pred eEEEEEEEEEeeCCCCCCcCcCceeeEEEeCCCCCCcEEEEEEEEeCCCCCceeEEEeecccCCccEEEE-EEeCCCCCC
Q psy11097 234 TGTATVRIYTKNKNDEEPKFSQQVYTPNVDENAGPNTLVTTVVASDKDGDNVSIISVKAKSFADREIRYT-LKAQGQGAG 312 (817)
Q Consensus 234 s~~~~v~I~V~DvNDn~P~f~~~~y~~~V~En~~~gt~v~~v~A~D~D~~~~~i~~~~~~~~~~~~i~y~-l~~~g~~~~ 312 (817)
.+++.+.|.|....+.+ .....|.+.+.... ...-..-...+++ +.+.|. |.-...+..
T Consensus 4 ~~~~~~~i~v~~~~~~~--~~~~~Fsf~L~~~d--PmP~~~tvt~~a~----------------G~v~F~~i~f~~~G~Y 63 (141)
T 3klq_A 4 DSTVQTSISVENVLERA--GDSTPFSVALESID--AMKTIEEITIAGS----------------GKASFSPLTFTTVGQY 63 (141)
T ss_dssp -CCEEECCEEEECCSST--TCCCEEEEEEEETT--TTEEEEEEEEESS----------------EEEECCCEEECSCEEE
T ss_pred ccceEEEEEEEEecccC--CCCceEEEEEEeCC--CCCCcEEEEEcCC----------------CcEEeCceEeCCCEEE
Q ss_pred CeEEeCceeEEEeCccCCccccCCCeEEEEEEEEEeCCCC-ceEEEEEE
Q psy11097 313 TFNIGPTSGIVKLAKELDFEDLRQPHVYSLIVTATEDSGG-FSTSVELT 360 (817)
Q Consensus 313 ~F~Id~~tG~i~~~~~LD~E~~~~~~~y~l~V~a~d~~g~-~~~~~~v~ 360 (817)
.+.|....|. ...+.|+. ..|.++|.+.++..+ |.+.+.+.
T Consensus 64 ~YtI~E~~G~---~~gvtYD~----~~y~VtV~V~~d~~G~L~A~v~~~ 105 (141)
T 3klq_A 64 TYRVYQKPSQ---NKDYQADT----TVFDVLVYVTYDEDGTLVAKVISR 105 (141)
T ss_dssp EEEEEECCCS---STTEECCC----CEEEEEEEEEECTTSCEEEEEEEE
T ss_pred EEEEEEeCCC---CCCcEEcC----CEEEEEEEEEECCCCCEEEEEEEe
No 80
>2y72_A Collagenase, collagenase G; polycystic kidney disease domain, beta barrel, collagen RECO domain, hydrolase; 1.18A {Clostridium histolyticum} PDB: 3jqu_A 3js7_A
Probab=21.42 E-value=1.4e+02 Score=23.78 Aligned_cols=27 Identities=22% Similarity=0.469 Sum_probs=20.6
Q ss_pred CeEEEEEEEEEeCCCCceEEEEEEEEEE
Q psy11097 337 PHVYSLIVTATEDSGGFSTSVELTIRVT 364 (817)
Q Consensus 337 ~~~y~l~V~a~d~~g~~~~~~~v~I~V~ 364 (817)
...|.++++++|. .+.+.+..+.|+|.
T Consensus 58 ~G~Y~v~LtVtd~-~G~~~t~~~~V~V~ 84 (85)
T 2y72_A 58 AGTYNVTLKVTDD-KGATATESFTIEIK 84 (85)
T ss_dssp CEEEEEEEEEEET-TSCEEEEEEEEEEE
T ss_pred CeEEEEEEEEEEC-CCCEEEEEEEEEEc
Confidence 4789999999964 45566777888775
Done!