RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy11097
(817 letters)
>d1l3wa4 b.1.6.1 (A:327-433) C-cadherin ectodomain {African clawed
frog (Xenopus laevis) [TaxId: 8355]}
Length = 107
Score = 67.3 bits (163), Expect = 3e-14
Identities = 29/111 (26%), Positives = 45/111 (40%), Gaps = 6/111 (5%)
Query: 566 DNKPVFRECSTYYPKVEEGAPNGSPVIKVHATDEDKGVNGQVKYSIVQQPNQKGAKFTVD 625
+ P F + V E G +I + A D DK ++ Y I P + TV+
Sbjct: 1 NEAPFFVP-AVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYFIGNDPARW---LTVN 56
Query: 626 EETGEVVTNKVFDREGDDGK--FVSVTIKATDQGEPSLEGVCSFTVEITDV 674
++ G V N DRE + K +V + TD G G + + + DV
Sbjct: 57 KDNGIVTGNGNLDRESEYVKNNTYTVIMLVTDDGVSVGTGTGTLILHVLDV 107
Score = 51.5 bits (122), Expect = 1e-08
Identities = 25/121 (20%), Positives = 43/121 (35%), Gaps = 16/121 (13%)
Query: 248 DEEPKFSQQVYTPNVDENAGPNTLVTTVVASDKDGDNVSIISVKAKSFADREIRYTLKAQ 307
+E P F V +V E+ + ++VA D D + +
Sbjct: 1 NEAPFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQK--------------LSYFIG 46
Query: 308 GQGAGTFNIGPTSGIVKLAKELDFEDLRQPH-VYSLIVTATEDSG-GFSTSVELTIRVTD 365
A + +GIV LD E + Y++I+ T+D + + L + V D
Sbjct: 47 NDPARWLTVNKDNGIVTGNGNLDRESEYVKNNTYTVIMLVTDDGVSVGTGTGTLILHVLD 106
Query: 366 V 366
V
Sbjct: 107 V 107
Score = 43.4 bits (101), Expect = 8e-06
Identities = 14/73 (19%), Positives = 25/73 (34%), Gaps = 4/73 (5%)
Query: 676 DNPPLFDRQKYVENVKQDASIGTNILRVSASDEDADNNGAIVYTLSAPYNQMDLEYFEIQ 735
+ P F +V +D S G I+ + A D D + Y + +
Sbjct: 1 NEAPFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYF----IGNDPARWLTVN 56
Query: 736 PESGWIVLKKPLD 748
++G + LD
Sbjct: 57 KDNGIVTGNGNLD 69
Score = 41.5 bits (96), Expect = 3e-05
Identities = 20/92 (21%), Positives = 39/92 (42%), Gaps = 8/92 (8%)
Query: 368 DNAPKFELPDYQAHNIDEDITTGTSILKVKATDADSGTNAEIEYHVSDDNF----AVDSN 423
+ AP F + ++ ED++ G I+ + A D D ++ Y + +D N
Sbjct: 1 NEAPFFVPAVSRV-DVSEDLSRGEKIISLVAQDPDKQQIQKLSYFIGNDPARWLTVNKDN 59
Query: 424 GVINNHKTLDADN---NNAYYEFVITAKDKDV 452
G++ + LD ++ N Y ++ D V
Sbjct: 60 GIVTGNGNLDRESEYVKNNTYTVIMLVTDDGV 91
Score = 38.4 bits (88), Expect = 5e-04
Identities = 16/93 (17%), Positives = 36/93 (38%), Gaps = 7/93 (7%)
Query: 98 DESPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDSDHN-IHYFIVRDRTGGRFEVDER 156
+E+P+F+ P + V + + +L A+DPD + + + V++
Sbjct: 1 NEAPFFV--PAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYFIGNDPARWLTVNKD 58
Query: 157 SGVVRTRGT----DPFQLDQEYVLYVKAEDQNG 185
+G+V G + + Y + + D
Sbjct: 59 NGIVTGNGNLDRESEYVKNNTYTVIMLVTDDGV 91
Score = 38.0 bits (87), Expect = 5e-04
Identities = 19/115 (16%), Positives = 45/115 (39%), Gaps = 21/115 (18%)
Query: 463 NKPPLWDNAIYGPIHIRENVTVSTVVTSVK---------ARFGFVGGSTSSGQFVIEDIT 513
N+ P + A+ + + E+++ + S+ + + G+ + +
Sbjct: 1 NEAPFFVPAVS-RVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYFIGNDPARWLTVNKDN 59
Query: 514 GVIRLNS----KSISLDRDKYELNVTAVDDGACCANGDQSVHTATAVVVVFITDV 564
G++ N +S + + Y + + DDG SV T T +++ + DV
Sbjct: 60 GIVTGNGNLDRESEYVKNNTYTVIMLVTDDG-------VSVGTGTGTLILHVLDV 107
>d2omzb1 b.1.6.1 (B:-2-101) E-cadherin (epithelial) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 104
Score = 61.7 bits (149), Expect = 3e-12
Identities = 20/95 (21%), Positives = 33/95 (34%), Gaps = 5/95 (5%)
Query: 581 VEEGAPNGSPVIKVHATDEDKGVNGQVKYSIVQQPNQKGAK--FTVDEETGEVVTNKVFD 638
E G + +K G+V YSI Q F ++ ETG + + D
Sbjct: 12 CPENEK-GPFPKNLVQIKSNKDKEGKVFYSITGQGADTPPVGVFIIERETGWLKVTEPLD 70
Query: 639 REGDDGKFVSVTIKATDQGEPSLEGVCSFTVEITD 673
RE ++ A ++E + +TD
Sbjct: 71 RE--RIATYTLFSHAVSSNGNAVEDPMEILITVTD 103
Score = 40.9 bits (95), Expect = 5e-05
Identities = 24/121 (19%), Positives = 41/121 (33%), Gaps = 24/121 (19%)
Query: 251 PKFSQQVYTPNVDENAGPNTLVTTVVASDKD-GDNVSIISVKAKSFADREIRYTLKAQGQ 309
P S + + EN +V + ++ Y++ QG
Sbjct: 1 PLGSWVIPPISCPENEKG-PFPKNLVQIKSNKDKE-------------GKVFYSITGQGA 46
Query: 310 GA---GTFNIGPTSGIVKLAKELDFEDLRQPHVYSLIVTATEDSGG--FSTSVELTIRVT 364
G F I +G +K+ + LD E + ++ A S G +E+ I VT
Sbjct: 47 DTPPVGVFIIERETGWLKVTEPLDRERIATYTLF---SHAV-SSNGNAVEDPMEILITVT 102
Query: 365 D 365
D
Sbjct: 103 D 103
Score = 39.3 bits (91), Expect = 2e-04
Identities = 8/88 (9%), Positives = 22/88 (25%), Gaps = 15/88 (17%)
Query: 388 TTGTSILKVKATDADSGTNAEIEYHVSDDN--------FAVDSNGVINNHKTLDADNNNA 439
G + ++ ++ Y ++ F ++ A
Sbjct: 16 EKGPFPKNLVQIKSNKDKEGKVFYSITGQGADTPPVGVFIIERETGWLKVTEPLDRERIA 75
Query: 440 YYEFVITAKDKD-------VDVELDVVD 460
Y A + +++ + V D
Sbjct: 76 TYTLFSHAVSSNGNAVEDPMEILITVTD 103
Score = 34.3 bits (78), Expect = 0.009
Identities = 9/48 (18%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Query: 695 SIGTNILRVSASDEDADNNGAIVYTLSAP-YNQMDLEYFEIQPESGWI 741
G + + D G + Y+++ + + F I+ E+GW+
Sbjct: 16 EKGPFPKNLVQIKSNKDKEGKVFYSITGQGADTPPVGVFIIERETGWL 63
Score = 32.4 bits (73), Expect = 0.051
Identities = 18/102 (17%), Positives = 32/102 (31%), Gaps = 20/102 (19%)
Query: 475 PIHIRENVTVSTV--VTSVKA--------RFGFVGGSTSS---GQFVIEDITGVIRLNSK 521
PI EN + +K+ + G + G F+IE TG +++
Sbjct: 9 PISCPENEKGPFPKNLVQIKSNKDKEGKVFYSITGQGADTPPVGVFIIERETGWLKVTEP 68
Query: 522 SISLDRDKYELNVTAVDDGACCANGDQSVHTATAVVVVFITD 563
Y L AV + +++ +TD
Sbjct: 69 LDRERIATYTLFSHAVSSN-------GNAVEDPMEILITVTD 103
>d1l3wa1 b.1.6.1 (A:1-100) C-cadherin ectodomain {African clawed
frog (Xenopus laevis) [TaxId: 8355]}
Length = 100
Score = 60.6 bits (146), Expect = 6e-12
Identities = 20/95 (21%), Positives = 37/95 (38%), Gaps = 5/95 (5%)
Query: 581 VEEGAPNGSPVIKVHATDEDKGVNGQVKYSIVQQPNQKGAK--FTVDEETGEVVTNKVFD 638
V E P ++ +K +V YSI Q + F ++ ETG ++ + D
Sbjct: 9 VSENERGPFPK-RLVQIKSNKDRFNKVYYSITGQGADNPPQGVFRIEWETGWMLVTRPLD 67
Query: 639 REGDDGKFVSVTIKATDQGEPSLEGVCSFTVEITD 673
RE + ++ A + +E T+ + D
Sbjct: 68 RE--EYDKYVLSSHAVSENGSPVEEPMEITINVID 100
Score = 40.1 bits (93), Expect = 8e-05
Identities = 7/88 (7%), Positives = 25/88 (28%), Gaps = 15/88 (17%)
Query: 388 TTGTSILKVKATDADSGTNAEIEYHVSDDN--------FAVDSNGVINNHKTLDADNNNA 439
G ++ ++ ++ Y ++ F ++
Sbjct: 13 ERGPFPKRLVQIKSNKDRFNKVYYSITGQGADNPPQGVFRIEWETGWMLVTRPLDREEYD 72
Query: 440 YYEFVITAKDKD-------VDVELDVVD 460
Y A ++ +++ ++V+D
Sbjct: 73 KYVLSSHAVSENGSPVEEPMEITINVID 100
Score = 39.8 bits (92), Expect = 1e-04
Identities = 22/114 (19%), Positives = 38/114 (33%), Gaps = 22/114 (19%)
Query: 257 VYTPNVDENAGPNTLVTTVVASDKDGDNVSIISVKAKSFADREIRYTLKAQG---QGAGT 313
+ V EN +V + D ++ Y++ QG G
Sbjct: 4 IPPIKVSENE-RGPFPKRLVQIKSNKD------------RFNKVYYSITGQGADNPPQGV 50
Query: 314 FNIGPTSGIVKLAKELDFEDLRQPHVYSLIVTATEDSGG--FSTSVELTIRVTD 365
F I +G + + + LD E+ + + A G +E+TI V D
Sbjct: 51 FRIEWETGWMLVTRPLDREEYDKYVLS---SHAV-SENGSPVEEPMEITINVID 100
Score = 36.7 bits (84), Expect = 0.001
Identities = 9/48 (18%), Positives = 19/48 (39%), Gaps = 1/48 (2%)
Query: 695 SIGTNILRVSASDEDADNNGAIVYTLSAPY-NQMDLEYFEIQPESGWI 741
G R+ + D + Y+++ + F I+ E+GW+
Sbjct: 13 ERGPFPKRLVQIKSNKDRFNKVYYSITGQGADNPPQGVFRIEWETGWM 60
Score = 36.7 bits (84), Expect = 0.002
Identities = 15/75 (20%), Positives = 25/75 (33%), Gaps = 7/75 (9%)
Query: 117 NAPPNTPVFTLQARDPDSDHN--IHYFIVRD----RTGGRFEVDERSGVVRTRGTDPFQL 170
N P L + D ++Y I G F ++ +G + +
Sbjct: 12 NERGPFPK-RLVQIKSNKDRFNKVYYSITGQGADNPPQGVFRIEWETGWMLVTRPLDREE 70
Query: 171 DQEYVLYVKAEDQNG 185
+YVL A +NG
Sbjct: 71 YDKYVLSSHAVSENG 85
Score = 33.2 bits (75), Expect = 0.024
Identities = 20/102 (19%), Positives = 34/102 (33%), Gaps = 20/102 (19%)
Query: 475 PIHIRENVTVSTV--VTSVKA--------RFGFVGGSTSS---GQFVIEDITGVIRLNSK 521
PI + EN + +K+ + G + G F IE TG + +
Sbjct: 6 PIKVSENERGPFPKRLVQIKSNKDRFNKVYYSITGQGADNPPQGVFRIEWETGWMLVTRP 65
Query: 522 SISLDRDKYELNVTAVDDGACCANGDQSVHTATAVVVVFITD 563
+ DKY L+ AV + S + + + D
Sbjct: 66 LDREEYDKYVLSSHAVSEN-------GSPVEEPMEITINVID 100
>d1l3wa2 b.1.6.1 (A:101-213) C-cadherin ectodomain {African clawed
frog (Xenopus laevis) [TaxId: 8355]}
Length = 113
Score = 58.1 bits (139), Expect = 5e-11
Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 5/113 (4%)
Query: 565 NDNKPVFRECSTYYPKVEEGAPNGSPVIKVHATDEDKGVNG---QVKYSIVQQ-PNQKGA 620
NDN+P F + + V EG G+ V+ V ATDED ++ + YSI++Q P +
Sbjct: 2 NDNRPKFTQ-DVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIP 60
Query: 621 KFTVDEETGEVVTNKVFDREGDDGKFVSVTIKATDQGEPSLEGVCSFTVEITD 673
V++ + + ++T++ATD L ++ITD
Sbjct: 61 NLFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGAGLSVEGKAIIQITD 113
Score = 49.3 bits (116), Expect = 8e-08
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 9/120 (7%)
Query: 247 NDEEPKFSQQVYTPNVDENAGPNTLVTTVVASDKDGDNVSIISVKAKSFADREIRYTLKA 306
ND PKF+Q V+ +V E P T V V A+D+D + S+ V + S ++ +
Sbjct: 2 NDNRPKFTQDVFRGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIP- 60
Query: 307 QGQGAGTFNIGPTSGIVKLAKELDFEDLRQPHVYSLIVTATE-DSGGFSTSVELTIRVTD 365
F I +G++ L D + Y+L V AT+ + G S + I++TD
Sbjct: 61 -----NLFTINRETGVISLIG--TGLDREKFPEYTLTVQATDLEGAGLSVEGKAIIQITD 113
Score = 37.7 bits (86), Expect = 7e-04
Identities = 28/132 (21%), Positives = 46/132 (34%), Gaps = 30/132 (22%)
Query: 675 NDNPPLFDRQKYVENVKQDASIGTNILRVSASDEDADNNGAIVYTLSAPYNQMDLEYFEI 734
NDN P F + + +V++ GT ++ VSA+D + +D +
Sbjct: 2 NDNRPKFTQDVFRGSVREGVQPGTQVMAVSATD---------------EDDNIDSLNGVL 46
Query: 735 QPESGWIVLKKPLDVYYYIVDSPRNEGKDFFEINLQSGEVF-TKVVFDREKQGAYALEVE 793
Y + P + F IN ++G + DREK Y L V+
Sbjct: 47 S--------------YSILKQDPEEPIPNLFTINRETGVISLIGTGLDREKFPEYTLTVQ 92
Query: 794 ARDGAPSARPNS 805
A D +
Sbjct: 93 ATDLEGAGLSVE 104
Score = 37.0 bits (84), Expect = 0.002
Identities = 24/113 (21%), Positives = 39/113 (34%), Gaps = 20/113 (17%)
Query: 367 NDNAPKFELPDYQAHNIDEDITTGTSILKVKATDAD------------SGTNAEIEYHVS 414
NDN PKF ++ ++ E + GT ++ V ATD D S + E +
Sbjct: 2 NDNRPKFTQDVFRG-SVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIP 60
Query: 415 DDNFAVDSNGVINNHKTLDADNNNAYYEFVITAKDKD-------VDVELDVVD 460
+ GVI+ T Y + A D + + + D
Sbjct: 61 NLFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGAGLSVEGKAIIQITD 113
Score = 30.8 bits (68), Expect = 0.18
Identities = 18/120 (15%), Positives = 34/120 (28%), Gaps = 26/120 (21%)
Query: 462 NNKPPLWDNAIYGPIHIRENVTVSTVVTSVKARFGFVGGSTSSGQFVIEDITGVIRLNSK 521
N+ P + ++ +RE V T V +V A + +G +
Sbjct: 2 NDNRPKFTQDVF-RGSVREGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIP 60
Query: 522 SISL------------------DRDKYELNVTAVDDGACCANGDQSVHTATAVVVVFITD 563
++ +Y L V A D + + ++ ITD
Sbjct: 61 NLFTINRETGVISLIGTGLDREKFPEYTLTVQATDLE-------GAGLSVEGKAIIQITD 113
Score = 26.9 bits (58), Expect = 4.2
Identities = 5/29 (17%), Positives = 13/29 (44%)
Query: 208 APQFYMPSYEAEIPENQKKDTEYPSMTGT 236
P+F + + E + T+ +++ T
Sbjct: 5 RPKFTQDVFRGSVREGVQPGTQVMAVSAT 33
>d1edha2 b.1.6.1 (A:102-213) E-cadherin (epithelial) {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 112
Score = 57.8 bits (138), Expect = 7e-11
Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 7/114 (6%)
Query: 565 NDNKPVFRECSTYYPKVEEGAPNGSPVIKVHATDEDKGV---NGQVKYSIVQQPNQKGAK 621
NDN+P F + + V EGA G+ V+KV ATD D V N + Y+IV Q + K
Sbjct: 1 NDNRPEFTQ-EVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHK 59
Query: 622 --FTVDEETGEVVTNKVFDREGDDGKFVSVTIKATDQGEPSLEGVCSFTVEITD 673
FTV+ +TG + + ++ ++A D L + + D
Sbjct: 60 NMFTVNRDTGVISVLTSGLDR-ESYPTYTLVVQAADLQGEGLSTTAKAVITVKD 112
Score = 43.2 bits (100), Expect = 9e-06
Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 9/120 (7%)
Query: 247 NDEEPKFSQQVYTPNVDENAGPNTLVTTVVASDKDGDNVSIISVKAKSFADREIRYTLKA 306
ND P+F+Q+V+ +V E A P T V V A+D D D + + A + ++
Sbjct: 1 NDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDP------ 54
Query: 307 QGQGAGTFNIGPTSGIVKLAKELDFEDLRQPHVYSLIVTATE-DSGGFSTSVELTIRVTD 365
+ F + +G++ + + Y+L+V A + G ST+ + I V D
Sbjct: 55 ELPHKNMFTVNRDTGVISVLTSGLDRESYP--TYTLVVQAADLQGEGLSTTAKAVITVKD 112
Score = 37.0 bits (84), Expect = 0.002
Identities = 29/113 (25%), Positives = 45/113 (39%), Gaps = 20/113 (17%)
Query: 367 NDNAPKFELPDYQAHNIDEDITTGTSILKVKATDADSGT---NAEIEYHVSDDN------ 417
NDN P+F ++ ++ E GTS++KV ATDAD NA I Y + +
Sbjct: 1 NDNRPEFTQEVFEG-SVAEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHK 59
Query: 418 --FAVDSNGV-INNHKTLDADNNNAYYEFVITAKDKD-------VDVELDVVD 460
F V+ + I+ + + Y V+ A D + V D
Sbjct: 60 NMFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGEGLSTTAKAVITVKD 112
Score = 35.9 bits (81), Expect = 0.004
Identities = 30/132 (22%), Positives = 47/132 (35%), Gaps = 30/132 (22%)
Query: 675 NDNPPLFDRQKYVENVKQDASIGTNILRVSASDEDADNNGAIVYTLSAPYNQMDLEYFEI 734
NDN P F ++ + +V + A GT++++VSA+D D D N
Sbjct: 1 NDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDADDDVNTYNAA---------------- 44
Query: 735 QPESGWIVLKKPLDVYYYIVDSPRNEGKDFFEINLQSGEVFTKVVF-DREKQGAYALEVE 793
Y + P K+ F +N +G + DRE Y L V+
Sbjct: 45 -------------IAYTIVSQDPELPHKNMFTVNRDTGVISVLTSGLDRESYPTYTLVVQ 91
Query: 794 ARDGAPSARPNS 805
A D +
Sbjct: 92 AADLQGEGLSTT 103
Score = 26.6 bits (57), Expect = 5.5
Identities = 5/21 (23%), Positives = 8/21 (38%)
Query: 208 APQFYMPSYEAEIPENQKKDT 228
P+F +E + E T
Sbjct: 4 RPEFTQEVFEGSVAEGAVPGT 24
>d1ncia_ b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 102
Score = 57.2 bits (137), Expect = 1e-10
Identities = 15/95 (15%), Positives = 33/95 (34%), Gaps = 5/95 (5%)
Query: 581 VEEGAPNGSPVIKVHATDEDKGVNGQVKYSIVQQPNQKGAK--FTVDEETGEVVTNKVFD 638
+ E + G ++ + N ++YS+ + F ++ +G++ K D
Sbjct: 11 LPENSR-GPFPQELVRIRSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLD 69
Query: 639 REGDDGKFVSVTIKATDQGEPSLEGVCSFTVEITD 673
RE + A D +E + + D
Sbjct: 70 RELIA--RFHLRAHAVDINGNQVENPIDIVINVID 102
Score = 38.3 bits (88), Expect = 4e-04
Identities = 24/107 (22%), Positives = 35/107 (32%), Gaps = 16/107 (14%)
Query: 261 NVDENAGPNTLVTTVVASDKDGDNVSIISVKAKSFADREIRYTLKAQGQGAGTFNIGPTS 320
N+ EN+ +V D + A G F I P S
Sbjct: 10 NLPENS-RGPFPQELVRIRSGRDKNLSLRYSVTGPG---------ADQPPTGIFIINPIS 59
Query: 321 GIVKLAKELDFEDLRQPHVYSLIVTATEDSGG--FSTSVELTIRVTD 365
G + + K LD E + + H L A D G +++ I V D
Sbjct: 60 GQLSVTKPLDRELIARFH---LRAHAV-DINGNQVENPIDIVINVID 102
Score = 37.1 bits (85), Expect = 0.001
Identities = 13/94 (13%), Positives = 31/94 (32%), Gaps = 16/94 (17%)
Query: 382 NIDEDITTGTSILKVKATDADSGTNAEIEYHVSDDN--------FAVDSNGVINNHKTLD 433
N+ E+ + G ++ + N + Y V+ F ++ +
Sbjct: 10 NLPEN-SRGPFPQELVRIRSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPL 68
Query: 434 ADNNNAYYEFVITAKDKD-------VDVELDVVD 460
A + A D + +D+ ++V+D
Sbjct: 69 DRELIARFHLRAHAVDINGNQVENPIDIVINVID 102
Score = 34.0 bits (77), Expect = 0.014
Identities = 15/78 (19%), Positives = 24/78 (30%), Gaps = 7/78 (8%)
Query: 114 VQLNAPPNTPVFTLQARDPDSDHN--IHYFIVRDRTGGR----FEVDERSGVVRTRGTDP 167
+ N+ P L D N + Y + F ++ SG +
Sbjct: 11 LPENSRGPFPQ-ELVRIRSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLD 69
Query: 168 FQLDQEYVLYVKAEDQNG 185
+L + L A D NG
Sbjct: 70 RELIARFHLRAHAVDING 87
Score = 31.3 bits (70), Expect = 0.10
Identities = 12/48 (25%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Query: 695 SIGTNILRVSASDEDADNNGAIVYTLSAPY-NQMDLEYFEIQPESGWI 741
S G + D N ++ Y+++ P +Q F I P SG +
Sbjct: 15 SRGPFPQELVRIRSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQL 62
Score = 31.0 bits (69), Expect = 0.13
Identities = 17/102 (16%), Positives = 32/102 (31%), Gaps = 20/102 (19%)
Query: 475 PIHIRENVTVSTVVTSVK-------------ARFGFVGGSTSSGQFVIEDITGVIRLNSK 521
PI++ EN V+ + G +G F+I I+G + +
Sbjct: 8 PINLPENSRGPFPQELVRIRSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKP 67
Query: 522 SISLDRDKYELNVTAVDDGACCANGDQSVHTATAVVVVFITD 563
++ L AVD + +V+ + D
Sbjct: 68 LDRELIARFHLRAHAVDIN-------GNQVENPIDIVINVID 102
>d1l3wa3 b.1.6.1 (A:214-326) C-cadherin ectodomain {African clawed
frog (Xenopus laevis) [TaxId: 8355]}
Length = 113
Score = 54.6 bits (130), Expect = 1e-09
Identities = 24/114 (21%), Positives = 39/114 (34%), Gaps = 6/114 (5%)
Query: 565 NDNKPVFRECSTYYPKVEEGAPNGSPVIKVHATD-EDKGVNGQVKYSIVQQPNQKGAKFT 623
NDN P+F TY V E G V ++ TD + G ++ T
Sbjct: 2 NDNAPIFDP-KTYTALVPENEI-GFEVQRLSVTDLDMPGTPAWQAVYKIRVNEGGFFNIT 59
Query: 624 VDEETGEVVTNKVFDREGDDGKFVSVTIKATDQ---GEPSLEGVCSFTVEITDV 674
D E+ + + + + K + I + P + TV + DV
Sbjct: 60 TDPESNQGILTTAKGLDFELRKQYVLQITVENAEPFSVPLPTSTATVTVTVEDV 113
Score = 46.1 bits (108), Expect = 9e-07
Identities = 24/124 (19%), Positives = 38/124 (30%), Gaps = 16/124 (12%)
Query: 247 NDEEPKFSQQVYTPNVDENAGPNTLVTTVVASDKDGDNVSIISVKAKSFADREIRYTLKA 306
ND P F + YT V EN V + +D D + Y ++
Sbjct: 2 NDNAPIFDPKTYTALVPENE-IGFEVQRLSVTDLDMPGTPAW----------QAVYKIRV 50
Query: 307 QGQGAGTFNIGPTSGIVKLAKELDFEDLRQPHVYSLIVTATED----SGGFSTSVELTIR 362
G P S L + + Y L +T +++ +T+
Sbjct: 51 NEGGFFNITTDPESNQGILTTAKGLDFELRKQ-YVLQITVENAEPFSVPLPTSTATVTVT 109
Query: 363 VTDV 366
V DV
Sbjct: 110 VEDV 113
Score = 42.3 bits (98), Expect = 2e-05
Identities = 19/94 (20%), Positives = 30/94 (31%), Gaps = 11/94 (11%)
Query: 367 NDNAPKFELPDYQAHNIDEDITTGTSILKVKATDADSGTNAEIEYHVSDD---------N 417
NDNAP F+ Y A + E+ G + ++ TD D +
Sbjct: 2 NDNAPIFDPKTYTA-LVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRVNEGGFFNIT 59
Query: 418 FAVDSNGVINNHKTLDADNNNAYYEFVITAKDKD 451
+SN I Y IT ++ +
Sbjct: 60 TDPESNQGILTTAKGLDFELRKQYVLQITVENAE 93
Score = 41.1 bits (95), Expect = 5e-05
Identities = 26/129 (20%), Positives = 40/129 (31%), Gaps = 32/129 (24%)
Query: 675 NDNPPLFDRQKYVENVKQDASIGTNILRVSASDEDADNNGAIVYTLSAPYNQMDLEYFEI 734
NDN P+FD + Y V ++ IG + R+S +D D A N+
Sbjct: 2 NDNAPIFDPKTYTALVPENE-IGFEVQRLSVTDLDMPGTPAWQAVYKIRVNEGGFFNITT 60
Query: 735 QPESGWIVLKKPLDVYYYIVDSPRNEGKDFFEINLQSGEVFTKVVFDREKQGAYALEVEA 794
PES +L D E + Y L++
Sbjct: 61 DPESNQGILTT-------------------------------AKGLDFELRKQYVLQITV 89
Query: 795 RDGAPSARP 803
+ P + P
Sbjct: 90 ENAEPFSVP 98
Score = 33.8 bits (76), Expect = 0.019
Identities = 22/106 (20%), Positives = 36/106 (33%), Gaps = 10/106 (9%)
Query: 97 NDESPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDSDHN---IHYFIVRDRTGGRFEV 153
ND +P F + A+V N V L D D + +R GG F +
Sbjct: 2 NDNAPIFDPKTY--TALVPENEI-GFEVQRLSVTDLDMPGTPAWQAVYKIRVNEGGFFNI 58
Query: 154 DERSG----VVRTRGTDPFQLDQEYVLYVKAEDQNGRKDERKFQST 195
++ T F+L ++YVL + E+ +
Sbjct: 59 TTDPESNQGILTTAKGLDFELRKQYVLQITVENAEPFSVPLPTSTA 104
Score = 33.8 bits (76), Expect = 0.021
Identities = 21/118 (17%), Positives = 39/118 (33%), Gaps = 21/118 (17%)
Query: 462 NNKPPLWDNAIYGPIHIRENVTVSTVVTSVKARFGFVGGSTS---------------SGQ 506
N+ P++D Y + EN + V + + G+ + +
Sbjct: 2 NDNAPIFDPKTY-TALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRVNEGGFFNIT 59
Query: 507 FVIEDITGVIRLNSKSISLDRDKYELNVTAVDDGACCANGDQSVHTATAVVVVFITDV 564
E G++ R +Y L +T + + T+TA V V + DV
Sbjct: 60 TDPESNQGILTTAKGLDFELRKQYVLQITVENAE----PFSVPLPTSTATVTVTVEDV 113
>d1op4a_ b.1.6.1 (A:) N-cadherin (neural) {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 136
Score = 53.8 bits (128), Expect = 3e-09
Identities = 18/141 (12%), Positives = 41/141 (29%), Gaps = 14/141 (9%)
Query: 563 DVNDNKPVFRECSTYYPKVEEGAPNGSPVIKVHATDEDKGVNGQVKYSIVQQPNQKGAKF 622
++ K F E Y + + G P++ V ++ ++ Q + S
Sbjct: 5 EIALCKTGFPE-DVYSAVLPKDVHEGQPLLNVKFSNCNRKRKVQYESSEPADFKVDEDGT 63
Query: 623 TVDEETGEVVTNKVFDREGDDGKFVSVTIKATDQGEPSLEGVCSFTVEITDVNDNPPLFD 682
V + F + I A D+ + + P+ +
Sbjct: 64 --------VYAVRSFPLTAE---QAKFLIYAQDKETQEK-WQVAVNLSREPTLTEEPMKE 111
Query: 683 RQKYVENV-KQDASIGTNILR 702
+ E V + + + L+
Sbjct: 112 PHEIEEIVFPRQLAKHSGALQ 132
Score = 51.1 bits (121), Expect = 3e-08
Identities = 20/128 (15%), Positives = 39/128 (30%), Gaps = 10/128 (7%)
Query: 365 DVNDNAPKFELPDYQAHNIDEDITTGTSILKVKATDADSGTNAEIEYHVSDDNFAVDSNG 424
++ F Y A + +D+ G +L VK ++ + + E D +
Sbjct: 5 EIALCKTGFPEDVYSAV-LPKDVHEGQPLLNVKFSNCNRKRKVQYESSEPADFKVDEDGT 63
Query: 425 VINNHKTLDADNNNAYYEFVITAKD------KDVDVELDVVDRNNKPPLWDNAIYGPIHI 478
V +F+I A+D V V L + P+ + I
Sbjct: 64 VYAVR---SFPLTAEQAKFLIYAQDKETQEKWQVAVNLSREPTLTEEPMKEPHEIEEIVF 120
Query: 479 RENVTVST 486
+ +
Sbjct: 121 PRQLAKHS 128
Score = 49.6 bits (117), Expect = 9e-08
Identities = 12/149 (8%), Positives = 32/149 (21%), Gaps = 23/149 (15%)
Query: 247 NDEEPKFSQQVYTPNVDENAGPNTLVTTVVASDKDGDNVSIISVKAKSFADREIRYTLKA 306
+ F + VY+ + ++ + V S+ +
Sbjct: 7 ALCKTGFPEDVYSAVLPKDVHEGQPLLNVKFSNCNRKRKVQ------------------- 47
Query: 307 QGQGAGTFNIGPTSGIVKLAKELDFEDLRQPHVYSLIVTATEDSGGFSTSVELTIRVTDV 366
G V + ++ A + V + +
Sbjct: 48 YESSEPADFKVDEDGTVYAVRSFPLT----AEQAKFLIYAQDKETQEKWQVAVNLSREPT 103
Query: 367 NDNAPKFELPDYQAHNIDEDITTGTSILK 395
P E + + + + L+
Sbjct: 104 LTEEPMKEPHEIEEIVFPRQLAKHSGALQ 132
Score = 38.8 bits (89), Expect = 6e-04
Identities = 9/76 (11%), Positives = 19/76 (25%), Gaps = 9/76 (11%)
Query: 673 DVNDNPPLFDRQKYVENVKQDASIGTNILRVSASDEDADNNGAIVYTLSAPYNQMDLEYF 732
++ F Y + +D G +L V S+ + +
Sbjct: 5 EIALCKTGFPEDVYSAVLPKDVHEGQPLLNVKFSNCNRKRK---------VQYESSEPAD 55
Query: 733 EIQPESGWIVLKKPLD 748
E G + +
Sbjct: 56 FKVDEDGTVYAVRSFP 71
Score = 33.8 bits (76), Expect = 0.027
Identities = 13/137 (9%), Positives = 33/137 (24%), Gaps = 12/137 (8%)
Query: 460 DRNNKPPLWDNAIYGPIHIRENVTVSTVVTSVKAR---FGFVGGSTSSGQFVIEDITGVI 516
+ + +Y + ++V + +VK SS +
Sbjct: 5 EIALCKTGFPEDVY-SAVLPKDVHEGQPLLNVKFSNCNRKRKVQYESSEPADFKVDEDGT 63
Query: 517 RLNSKSISLDRDKYELNVTAVDDGACCANGDQSVHTATAVVVVFITDVNDNKPVFRECST 576
+S L ++ + + A D + V + +P+
Sbjct: 64 VYAVRSFPLTAEQAKFLIYAQDKE--------TQEKWQVAVNLSREPTLTEEPMKEPHEI 115
Query: 577 YYPKVEEGAPNGSPVIK 593
S ++
Sbjct: 116 EEIVFPRQLAKHSGALQ 132
Score = 32.7 bits (73), Expect = 0.059
Identities = 12/96 (12%), Positives = 31/96 (32%), Gaps = 5/96 (5%)
Query: 95 DVNDESPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDSDHNIHYFIVRDRTGGRFEVD 154
++ F AV+ + P+ ++ + + + Y F+VD
Sbjct: 5 EIALCKTGFPEDVY--SAVLPKDVHEGQPLLNVKFSNCNRKRKVQYESSEPA---DFKVD 59
Query: 155 ERSGVVRTRGTDPFQLDQEYVLYVKAEDQNGRKDER 190
E V R ++++Y + ++ +
Sbjct: 60 EDGTVYAVRSFPLTAEQAKFLIYAQDKETQEKWQVA 95
>d1ncja2 b.1.6.1 (A:102-215) N-cadherin (neural) {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 114
Score = 51.3 bits (121), Expect = 2e-08
Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 6/116 (5%)
Query: 565 NDNKPVFRECSTYYPKVEEGAPNGSPVIKVHATDEDKG--VNGQVKYSIVQQ--PNQKGA 620
NDN+P F + V EG+ G+ V+ V A D D +NG ++Y IV Q
Sbjct: 1 NDNRPEFLH-QVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRIVSQAPSTPSPN 59
Query: 621 KFTVDEETGEVVTNKVFDREGDDGKFVSVTIKATDQGEPSLEGVCSFTVEITDVND 676
FT++ ETG+++T + + ++ I+ATD G+ + + V D
Sbjct: 60 MFTINNETGDIITVAAGLDR-EKVQQYTLIIQATDMEGNPTYGLSNTATAVITVTD 114
Score = 51.3 bits (121), Expect = 2e-08
Identities = 33/123 (26%), Positives = 48/123 (39%), Gaps = 13/123 (10%)
Query: 247 NDEEPKFSQQVYTPNVDENAGPNTLVTTVVASDKDGDNVSIISVKAKSFADREIRYTLKA 306
ND P+F QV+ +V E + P T V TV A D D N ++ + +
Sbjct: 1 NDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRIVSQAP------- 53
Query: 307 QGQGAGTFNIGPTSGIVKLAKELDFEDLRQPHVYSLIVTATEDSG----GFSTSVELTIR 362
F I +G + + Q Y+LI+ AT+ G G S + I
Sbjct: 54 STPSPNMFTINNETGDIITVAAGLDREKVQ--QYTLIIQATDMEGNPTYGLSNTATAVIT 111
Query: 363 VTD 365
VTD
Sbjct: 112 VTD 114
Score = 42.0 bits (97), Expect = 2e-05
Identities = 22/115 (19%), Positives = 36/115 (31%), Gaps = 22/115 (19%)
Query: 367 NDNAPKFELPDYQAHNIDEDITTGTSILKVKATDADSGTNA----------EIEYHVSDD 416
NDN P+F + ++ E GT ++ V A DAD + S +
Sbjct: 1 NDNRPEFLHQVWNG-SVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRIVSQAPSTPSPN 59
Query: 417 NFAVDSNG-VINNHKTLDADNNNAYYEFVITAKDKD----------VDVELDVVD 460
F +++ I Y +I A D + + V D
Sbjct: 60 MFTINNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSNTATAVITVTD 114
Score = 40.5 bits (93), Expect = 9e-05
Identities = 29/131 (22%), Positives = 47/131 (35%), Gaps = 31/131 (23%)
Query: 675 NDNPPLFDRQKYVENVKQDASIGTNILRVSASDEDADNNGAIVYTLSAPYNQMDLEYFEI 734
NDN P F Q + +V + + GT ++ V+A D D N +
Sbjct: 1 NDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDPNALNGMLR--------------- 45
Query: 735 QPESGWIVLKKPLDVYYYIVDSPRNEGKDFFEINLQSGEVFT-KVVFDREKQGAYALEVE 793
Y + +P + F IN ++G++ T DREK Y L ++
Sbjct: 46 ---------------YRIVSQAPSTPSPNMFTINNETGDIITVAAGLDREKVQQYTLIIQ 90
Query: 794 ARDGAPSARPN 804
A D +
Sbjct: 91 ATDMEGNPTYG 101
Score = 37.8 bits (86), Expect = 7e-04
Identities = 21/98 (21%), Positives = 38/98 (38%), Gaps = 11/98 (11%)
Query: 97 NDESPYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDSDHNIHYFIVRDRTGG------- 149
ND P F+++ V + P T V T+ A D D + ++ +
Sbjct: 1 NDNRPEFLHQVW--NGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRIVSQAPSTPSP 58
Query: 150 -RFEVDERSGVVRT-RGTDPFQLDQEYVLYVKAEDQNG 185
F ++ +G + T + Q+Y L ++A D G
Sbjct: 59 NMFTINNETGDIITVAAGLDREKVQQYTLIIQATDMEG 96
Score = 34.3 bits (77), Expect = 0.012
Identities = 22/119 (18%), Positives = 39/119 (32%), Gaps = 22/119 (18%)
Query: 462 NNKPPLWDNAIYGPIHIRENVTVSTVVTSVKARFGFVGG----------------STSSG 505
N+ P + + ++ + E T V +V A + S
Sbjct: 1 NDNRPEFLHQVW-NGSVPEGSKPGTYVMTVTAIDADDPNALNGMLRYRIVSQAPSTPSPN 59
Query: 506 QFVIEDITGVIRLNSKSISLD-RDKYELNVTAVDDGACCANGDQSVHTATAVVVVFITD 563
F I + TG I + + + +Y L + A D + TA V+ +TD
Sbjct: 60 MFTINNETGDIITVAAGLDREKVQQYTLIIQATDME----GNPTYGLSNTATAVITVTD 114
>d1l3wa5 b.1.6.1 (A:434-540) C-cadherin ectodomain {African clawed
frog (Xenopus laevis) [TaxId: 8355]}
Length = 107
Score = 39.7 bits (91), Expect = 2e-04
Identities = 19/125 (15%), Positives = 31/125 (24%), Gaps = 21/125 (16%)
Query: 247 NDEEPKFSQQVYTPNVDENAGPNTLVTTVVASDKDGDNVSIISVKAKSFADREIRYTLKA 306
ND P S +V+T + + ++T SD D Y K
Sbjct: 1 NDNGPVPSPRVFT--MCDQNPEPQVLT---ISDAD---------------IPPNTYPYKV 40
Query: 307 QGQGAGTFNIGPTSGIVKLAKELDFEDLRQPHVYSLIVTATEDSGGFSTSVELTIRVTDV 366
+ L + YS+ V + D+ + V
Sbjct: 41 SLSHGSDLTWKAELDSKGTSMLLSPTQQLKKGDYSIYVLLS-DAQNNPQLTVVNATVCSC 99
Query: 367 NDNAP 371
A
Sbjct: 100 EGKAI 104
Score = 38.9 bits (89), Expect = 2e-04
Identities = 13/115 (11%), Positives = 28/115 (24%), Gaps = 11/115 (9%)
Query: 565 NDNKPVFRECSTYYPKVEEGAPNGSPVIKVHATDEDKGVNGQVKYSIVQQPNQKGAKFTV 624
NDN PV S + + + +D D N + + K +
Sbjct: 1 NDNGPVP---SPRVFTMCD---QNPEPQVLTISDADIPPNTYPYKVSLSHGSDLTWKAEL 54
Query: 625 DEETGEVVTNKVFDREGDDGKFVSVTIKATDQGEPSLEGVCSFTVEITDVNDNPP 679
D + + + + S+ + +D +
Sbjct: 55 DSKG---TSMLLSPTQQLKKGDYSIYVLLSDAQNNPQL--TVVNATVCSCEGKAI 104
Score = 28.1 bits (61), Expect = 1.5
Identities = 14/110 (12%), Positives = 24/110 (21%), Gaps = 16/110 (14%)
Query: 367 NDNAPKFELPDYQAHNIDEDITTGTSILKVKATDADSGTNAEIEYHVSDDNFAVDSNGVI 426
NDN P + + + + +DAD N + +
Sbjct: 1 NDNGPVPSPRVF---TMCDQNPEPQVL---TISDADIPPNTYPYKVSLSHGSDLTWKAEL 54
Query: 427 NNHKTLDA-----DNNNAYYEFVITAKDKDV-----DVELDVVDRNNKPP 466
++ T Y + D V V K
Sbjct: 55 DSKGTSMLLSPTQQLKKGDYSIYVLLSDAQNNPQLTVVNATVCSCEGKAI 104
>d1stfi_ d.17.1.2 (I:) Cystatin B (stefin B) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 98
Score = 27.0 bits (60), Expect = 3.5
Identities = 17/74 (22%), Positives = 29/74 (39%), Gaps = 5/74 (6%)
Query: 596 ATDEDKGVNGQVKYSIVQQPNQKGAKFTVDEETGEVV--TNKVFDREGDDGKFVSVTIKA 653
AT E + + QV+ + ++ N+K F +VV TN D FV + +
Sbjct: 12 ATAETQHIADQVRSQLEEKYNKKFPVFKAVSFKSQVVAGTNYFIKVHVGDEDFVHLRVFQ 71
Query: 654 TDQGE---PSLEGV 664
+ E +L
Sbjct: 72 SLPHENKPLTLSNY 85
>d2hc5a1 d.352.1.1 (A:1-109) Hypothetical protein YvyC {Bacillus
subtilis [TaxId: 1423]}
Length = 109
Score = 26.7 bits (59), Expect = 4.7
Identities = 7/30 (23%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 614 QPNQKGAKFTVDEETGEVVTNKVFDREGDD 643
+P+Q KF + ++ E KV + ++
Sbjct: 52 EPSQVHLKFELHDKLNEYYV-KVIEDSTNE 80
>d1wspa1 d.15.1.8 (A:750-832) Axin 1 {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 83
Score = 26.2 bits (58), Expect = 4.9
Identities = 7/42 (16%), Positives = 14/42 (33%), Gaps = 3/42 (7%)
Query: 436 NNNAYYEFVITAKDKDVD---VELDVVDRNNKPPLWDNAIYG 474
Y + + D V +V + P+++ I G
Sbjct: 36 TKKGSYRYYFKKVSDEFDCGVVFEEVREDEAILPVFEEKIIG 77
>d1q15a2 d.153.1.1 (A:2-205) beta-Lactam synthetase {Pectobacterium
carotovorum [TaxId: 554]}
Length = 204
Score = 26.9 bits (59), Expect = 8.7
Identities = 9/68 (13%), Positives = 15/68 (22%), Gaps = 3/68 (4%)
Query: 376 PDYQAHNIDEDITTGTSILKVKATDADSGTNAEIEYHVSDDNFAVDSNGVINNHKTLDAD 435
D +NI D L + + + + G + N L
Sbjct: 11 SDTDINNIQRDFDGKGEALSNGYLFIEQNGHYQKCE---MERGTAYLIGSLYNRTFLIGL 67
Query: 436 NNNAYYEF 443
E
Sbjct: 68 AGVWEGEA 75
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.314 0.132 0.379
Gapped
Lambda K H
0.267 0.0629 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,979,767
Number of extensions: 144546
Number of successful extensions: 410
Number of sequences better than 10.0: 1
Number of HSP's gapped: 371
Number of HSP's successfully gapped: 73
Length of query: 817
Length of database: 2,407,596
Length adjustment: 93
Effective length of query: 724
Effective length of database: 1,130,706
Effective search space: 818631144
Effective search space used: 818631144
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 57 (25.9 bits)