BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11098
(380 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/276 (35%), Positives = 145/276 (52%), Gaps = 23/276 (8%)
Query: 93 WQQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER--------QPQQITR 144
++QE E YE E LG+G+F VRK R +GTG+ A K I + R ++I R
Sbjct: 5 FRQEDVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIER 64
Query: 145 AEYNLLSTLMHAHIPTALALFENAPVPGTDTI-VMQLVHGESLIQHLCRQSTITESYICC 203
E N+L + H +I T +FEN TD + +++LV G L L + ++TE
Sbjct: 65 -EVNILREIRHPNIITLHDIFENK----TDVVLILELVSGGELFDFLAEKESLTEDEATQ 119
Query: 204 IIRQLHSALHCLHSQQIAHKDIRPENI-LMNGAV----LKLIDLGXXXXXXXXXLPDLEF 258
++Q+ +H LHS++IAH D++PENI L++ V +KLID G F
Sbjct: 120 FLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF 179
Query: 259 ASPEMLTSPATA----GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPP 314
+PE + G DMWS+GV+ YILLSG SPFL E+++ET +IS +Y F
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDE 239
Query: 315 EQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW 350
E + S A++ I +LL +R Q L+ +W
Sbjct: 240 EYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSW 275
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/279 (35%), Positives = 144/279 (51%), Gaps = 23/279 (8%)
Query: 90 ETRWQQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER--------QPQQ 141
E + Q E YE E LG+G+F VRK R +GTG+ A K I + R ++
Sbjct: 16 ENLYFQSMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREE 75
Query: 142 ITRAEYNLLSTLMHAHIPTALALFENAPVPGTDTI-VMQLVHGESLIQHLCRQSTITESY 200
I R E N+L + H +I T +FEN TD + +++LV G L L + ++TE
Sbjct: 76 IER-EVNILREIRHPNIITLHDIFENK----TDVVLILELVSGGELFDFLAEKESLTEDE 130
Query: 201 ICCIIRQLHSALHCLHSQQIAHKDIRPENI-LMNGAV----LKLIDLGXXXXXXXXXLPD 255
++Q+ +H LHS++IAH D++PENI L++ V +KLID G
Sbjct: 131 ATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFK 190
Query: 256 LEFASPEMLTSPATA----GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYS 311
F +PE + G DMWS+GV+ YILLSG SPFL E+++ET +IS +Y
Sbjct: 191 NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYD 250
Query: 312 FPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW 350
F E + S A++ I +LL +R Q L+ +W
Sbjct: 251 FDEEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSW 289
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/270 (35%), Positives = 142/270 (52%), Gaps = 23/270 (8%)
Query: 99 EHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER--------QPQQITRAEYNLL 150
E YE E LG+G+F VRK R +GTG+ A K I + R ++I R E N+L
Sbjct: 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIER-EVNIL 62
Query: 151 STLMHAHIPTALALFENAPVPGTDTI-VMQLVHGESLIQHLCRQSTITESYICCIIRQLH 209
+ H +I T +FEN TD + +++LV G L L + ++TE ++Q+
Sbjct: 63 REIRHPNIITLHDIFENK----TDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQIL 118
Query: 210 SALHCLHSQQIAHKDIRPENI-LMNGAV----LKLIDLGXXXXXXXXXLPDLEFASPEML 264
+H LHS++IAH D++PENI L++ V +KLID G F +PE +
Sbjct: 119 DGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFV 178
Query: 265 TSPATA----GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHI 320
G DMWS+GV+ YILLSG SPFL E+++ET +IS +Y F E +
Sbjct: 179 APEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNT 238
Query: 321 SVPARELIGQLLNTHADKRPTAGQLLQVAW 350
S A++ I +LL +R T Q L+ +W
Sbjct: 239 SELAKDFIRRLLVKDPKRRMTIAQSLEHSW 268
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/307 (32%), Positives = 154/307 (50%), Gaps = 33/307 (10%)
Query: 91 TRWQQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP--------QQI 142
T ++QE + Y+ E LG+G+F V+K R++ TG A K I + R + I
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 143 TRAEYNLLSTLMHAHIPTALALFENAPVPGTDTI-VMQLVHGESLIQHLCRQSTITESYI 201
R E ++L + H ++ T ++EN TD I +++LV G L L + ++TE
Sbjct: 62 ER-EVSILKEIQHPNVITLHEVYENK----TDVILILELVAGGELFDFLAEKESLTEEEA 116
Query: 202 CCIIRQLHSALHCLHSQQIAHKDIRPENI-LMNGAV----LKLIDLGXX-----XXXXXX 251
++Q+ + ++ LHS QIAH D++PENI L++ V +K+ID G
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 252 XLPDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYS 311
EF +PE++ G DMWS+GV+ YILLSG SPFL ++++ET A++S +Y
Sbjct: 177 IFGTPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 312 FPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFA--------EASCSEFDTER 363
F E + S A++ I +LL KR T LQ W S + E+
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSRKASAVNMEK 295
Query: 364 LLPFSAR 370
F+AR
Sbjct: 296 FKKFAAR 302
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 142 bits (358), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/279 (33%), Positives = 146/279 (52%), Gaps = 25/279 (8%)
Query: 91 TRWQQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP--------QQI 142
T ++QE + Y+ E LG+G+F V+K R++ TG A K I + R + I
Sbjct: 2 TVFRQENVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 143 TRAEYNLLSTLMHAHIPTALALFENAPVPGTDTI-VMQLVHGESLIQHLCRQSTITESYI 201
R E ++L + H ++ T ++EN TD I +++LV G L L + ++TE
Sbjct: 62 ER-EVSILKEIQHPNVITLHEVYENK----TDVILILELVAGGELFDFLAEKESLTEEEA 116
Query: 202 CCIIRQLHSALHCLHSQQIAHKDIRPENI-LMNGAV----LKLIDLGXXXX-----XXXX 251
++Q+ + ++ LHS QIAH D++PENI L++ V +K+ID G
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 252 XLPDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYS 311
EF +PE++ G DMWS+GV+ YILLSG SPFL ++++ET A++S +Y
Sbjct: 177 IFGTPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 312 FPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW 350
F E + S A++ I +LL KR T LQ W
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 94/279 (33%), Positives = 146/279 (52%), Gaps = 25/279 (8%)
Query: 91 TRWQQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP--------QQI 142
T ++QE + Y+ E LG+G+F V+K R++ TG A K I + R + I
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 143 TRAEYNLLSTLMHAHIPTALALFENAPVPGTDTI-VMQLVHGESLIQHLCRQSTITESYI 201
R E ++L + H ++ T ++EN TD I +++LV G L L + ++TE
Sbjct: 62 ER-EVSILKEIQHPNVITLHEVYENK----TDVILILELVAGGELFDFLAEKESLTEEEA 116
Query: 202 CCIIRQLHSALHCLHSQQIAHKDIRPENI-LMNGAV----LKLIDLGXX-----XXXXXX 251
++Q+ + ++ LHS QIAH D++PENI L++ V +K+ID G
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 252 XLPDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYS 311
EF +PE++ G DMWS+GV+ YILLSG SPFL ++++ET A++S +Y
Sbjct: 177 IFGTPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 312 FPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW 350
F E + S A++ I +LL KR T LQ W
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 94/279 (33%), Positives = 146/279 (52%), Gaps = 25/279 (8%)
Query: 91 TRWQQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP--------QQI 142
T ++QE + Y+ E LG+G+F V+K R++ TG A K I + R + I
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 143 TRAEYNLLSTLMHAHIPTALALFENAPVPGTDTI-VMQLVHGESLIQHLCRQSTITESYI 201
R E ++L + H ++ T ++EN TD I +++LV G L L + ++TE
Sbjct: 62 ER-EVSILKEIQHPNVITLHEVYENK----TDVILILELVAGGELFDFLAEKESLTEEEA 116
Query: 202 CCIIRQLHSALHCLHSQQIAHKDIRPENI-LMNGAV----LKLIDLGXX-----XXXXXX 251
++Q+ + ++ LHS QIAH D++PENI L++ V +K+ID G
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 252 XLPDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYS 311
EF +PE++ G DMWS+GV+ YILLSG SPFL ++++ET A++S +Y
Sbjct: 177 IFGTPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 312 FPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW 350
F E + S A++ I +LL KR T LQ W
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 94/279 (33%), Positives = 146/279 (52%), Gaps = 25/279 (8%)
Query: 91 TRWQQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP--------QQI 142
T ++QE + Y+ E LG+G+F V+K R++ TG A K I + R + I
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 143 TRAEYNLLSTLMHAHIPTALALFENAPVPGTDTI-VMQLVHGESLIQHLCRQSTITESYI 201
R E ++L + H ++ T ++EN TD I +++LV G L L + ++TE
Sbjct: 62 ER-EVSILKEIQHPNVITLHEVYENK----TDVILILELVAGGELFDFLAEKESLTEEEA 116
Query: 202 CCIIRQLHSALHCLHSQQIAHKDIRPENI-LMNGAV----LKLIDLGXX-----XXXXXX 251
++Q+ + ++ LHS QIAH D++PENI L++ V +K+ID G
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 252 XLPDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYS 311
EF +PE++ G DMWS+GV+ YILLSG SPFL ++++ET A++S +Y
Sbjct: 177 IFGTPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 312 FPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW 350
F E + S A++ I +LL KR T LQ W
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 94/279 (33%), Positives = 146/279 (52%), Gaps = 25/279 (8%)
Query: 91 TRWQQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP--------QQI 142
T ++QE + Y+ E LG+G+F V+K R++ TG A K I + R + I
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 143 TRAEYNLLSTLMHAHIPTALALFENAPVPGTDTI-VMQLVHGESLIQHLCRQSTITESYI 201
R E ++L + H ++ T ++EN TD I +++LV G L L + ++TE
Sbjct: 62 ER-EVSILKEIQHPNVITLHEVYENK----TDVILILELVAGGELFDFLAEKESLTEEEA 116
Query: 202 CCIIRQLHSALHCLHSQQIAHKDIRPENI-LMNGAV----LKLIDLGXX-----XXXXXX 251
++Q+ + ++ LHS QIAH D++PENI L++ V +K+ID G
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 252 XLPDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYS 311
EF +PE++ G DMWS+GV+ YILLSG SPFL ++++ET A++S +Y
Sbjct: 177 IFGTPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 312 FPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW 350
F E + S A++ I +LL KR T LQ W
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 94/279 (33%), Positives = 146/279 (52%), Gaps = 25/279 (8%)
Query: 91 TRWQQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP--------QQI 142
T ++QE + Y+ E LG+G+F V+K R++ TG A K I + R + I
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 143 TRAEYNLLSTLMHAHIPTALALFENAPVPGTDTI-VMQLVHGESLIQHLCRQSTITESYI 201
R E ++L + H ++ T ++EN TD I +++LV G L L + ++TE
Sbjct: 62 ER-EVSILKEIQHPNVITLHEVYENK----TDVILILELVAGGELFDFLAEKESLTEEEA 116
Query: 202 CCIIRQLHSALHCLHSQQIAHKDIRPENI-LMNGAV----LKLIDLGXX-----XXXXXX 251
++Q+ + ++ LHS QIAH D++PENI L++ V +K+ID G
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 252 XLPDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYS 311
EF +PE++ G DMWS+GV+ YILLSG SPFL ++++ET A++S +Y
Sbjct: 177 IFGTPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 312 FPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW 350
F E + S A++ I +LL KR T LQ W
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 94/279 (33%), Positives = 146/279 (52%), Gaps = 25/279 (8%)
Query: 91 TRWQQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP--------QQI 142
T ++QE + Y+ E LG+G+F V+K R++ TG A K I + R + I
Sbjct: 1 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 60
Query: 143 TRAEYNLLSTLMHAHIPTALALFENAPVPGTDTI-VMQLVHGESLIQHLCRQSTITESYI 201
R E ++L + H ++ T ++EN TD I +++LV G L L + ++TE
Sbjct: 61 ER-EVSILKEIQHPNVITLHEVYENK----TDVILILELVAGGELFDFLAEKESLTEEEA 115
Query: 202 CCIIRQLHSALHCLHSQQIAHKDIRPENI-LMNGAV----LKLIDLGXXXX-----XXXX 251
++Q+ + ++ LHS QIAH D++PENI L++ V +K+ID G
Sbjct: 116 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 175
Query: 252 XLPDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYS 311
EF +PE++ G DMWS+GV+ YILLSG SPFL ++++ET A++S +Y
Sbjct: 176 IFGTPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 234
Query: 312 FPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW 350
F E + S A++ I +LL KR T LQ W
Sbjct: 235 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPW 273
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 94/279 (33%), Positives = 146/279 (52%), Gaps = 25/279 (8%)
Query: 91 TRWQQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP--------QQI 142
T ++QE + Y+ E LG+G+F V+K R++ TG A K I + R + I
Sbjct: 1 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 60
Query: 143 TRAEYNLLSTLMHAHIPTALALFENAPVPGTDTI-VMQLVHGESLIQHLCRQSTITESYI 201
R E ++L + H ++ T ++EN TD I +++LV G L L + ++TE
Sbjct: 61 ER-EVSILKEIQHPNVITLHEVYENK----TDVILILELVAGGELFDFLAEKESLTEEEA 115
Query: 202 CCIIRQLHSALHCLHSQQIAHKDIRPENI-LMNGAV----LKLIDLGXX-----XXXXXX 251
++Q+ + ++ LHS QIAH D++PENI L++ V +K+ID G
Sbjct: 116 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 175
Query: 252 XLPDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYS 311
EF +PE++ G DMWS+GV+ YILLSG SPFL ++++ET A++S +Y
Sbjct: 176 IFGTPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 234
Query: 312 FPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW 350
F E + S A++ I +LL KR T LQ W
Sbjct: 235 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPW 273
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 141 bits (356), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 94/279 (33%), Positives = 146/279 (52%), Gaps = 25/279 (8%)
Query: 91 TRWQQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP--------QQI 142
T ++QE + Y+ E LG+G+F V+K R++ TG A K I + R + I
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 143 TRAEYNLLSTLMHAHIPTALALFENAPVPGTDTI-VMQLVHGESLIQHLCRQSTITESYI 201
R E ++L + H ++ T ++EN TD I +++LV G L L + ++TE
Sbjct: 62 ER-EVSILKEIQHPNVITLHEVYENK----TDVILILELVAGGELFDFLAEKESLTEEEA 116
Query: 202 CCIIRQLHSALHCLHSQQIAHKDIRPENI-LMNGAV----LKLIDLGXXXX-----XXXX 251
++Q+ + ++ LHS QIAH D++PENI L++ V +K+ID G
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 252 XLPDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYS 311
EF +PE++ G DMWS+GV+ YILLSG SPFL ++++ET A++S +Y
Sbjct: 177 IFGTPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 312 FPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW 350
F E + S A++ I +LL KR T LQ W
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 141 bits (355), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 94/279 (33%), Positives = 146/279 (52%), Gaps = 25/279 (8%)
Query: 91 TRWQQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP--------QQI 142
T ++QE + Y+ E LG+G+F V+K R++ TG A K I + R + I
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 143 TRAEYNLLSTLMHAHIPTALALFENAPVPGTDTI-VMQLVHGESLIQHLCRQSTITESYI 201
R E ++L + H ++ T ++EN TD I +++LV G L L + ++TE
Sbjct: 62 ER-EVSILKEIQHPNVITLHEVYENK----TDVILILELVAGGELFDFLAEKESLTEEEA 116
Query: 202 CCIIRQLHSALHCLHSQQIAHKDIRPENI-LMNGAV----LKLIDLGXX-----XXXXXX 251
++Q+ + ++ LHS QIAH D++PENI L++ V +K+ID G
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 252 XLPDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYS 311
EF +PE++ G DMWS+GV+ YILLSG SPFL ++++ET A++S +Y
Sbjct: 177 IFGTPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 312 FPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW 350
F E + S A++ I +LL KR T LQ W
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/279 (33%), Positives = 146/279 (52%), Gaps = 25/279 (8%)
Query: 91 TRWQQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP--------QQI 142
T ++QE + Y+ E LG+G+F V+K R++ TG A K I + R + I
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 143 TRAEYNLLSTLMHAHIPTALALFENAPVPGTDTIVM-QLVHGESLIQHLCRQSTITESYI 201
R E ++L + H ++ T ++EN TD I++ +LV G L L + ++TE
Sbjct: 62 ER-EVSILKEIQHPNVITLHEVYENK----TDVILIGELVAGGELFDFLAEKESLTEEEA 116
Query: 202 CCIIRQLHSALHCLHSQQIAHKDIRPENI-LMNGAV----LKLIDLGXX-----XXXXXX 251
++Q+ + ++ LHS QIAH D++PENI L++ V +K+ID G
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 252 XLPDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYS 311
EF +PE++ G DMWS+GV+ YILLSG SPFL ++++ET A++S +Y
Sbjct: 177 IFGTPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 312 FPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW 350
F E + S A++ I +LL KR T LQ W
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/279 (33%), Positives = 145/279 (51%), Gaps = 25/279 (8%)
Query: 91 TRWQQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP--------QQI 142
T ++QE + Y+ E LG+G F V+K R++ TG A K I + R + I
Sbjct: 2 TVFRQENVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 143 TRAEYNLLSTLMHAHIPTALALFENAPVPGTDTI-VMQLVHGESLIQHLCRQSTITESYI 201
R E ++L + H ++ T ++EN TD I +++LV G L L + ++TE
Sbjct: 62 ER-EVSILKEIQHPNVITLHEVYENK----TDVILILELVAGGELFDFLAEKESLTEEEA 116
Query: 202 CCIIRQLHSALHCLHSQQIAHKDIRPENI-LMNGAV----LKLIDLGXXXX-----XXXX 251
++Q+ + ++ LHS QIAH D++PENI L++ V +K+ID G
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 252 XLPDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYS 311
EF +PE++ G DMWS+GV+ YILLSG SPFL ++++ET A++S +Y
Sbjct: 177 IFGTPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 312 FPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW 350
F E + S A++ I +LL KR T LQ W
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 139 bits (349), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/279 (33%), Positives = 145/279 (51%), Gaps = 25/279 (8%)
Query: 91 TRWQQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP--------QQI 142
T ++QE + Y+ E LG+G+F V+K R++ TG A K I + R + I
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 143 TRAEYNLLSTLMHAHIPTALALFENAPVPGTDTI-VMQLVHGESLIQHLCRQSTITESYI 201
R E ++L + H ++ T ++EN TD I +++LV G L L + ++TE
Sbjct: 62 ER-EVSILKEIQHPNVITLHEVYENK----TDVILILELVAGGELFDFLAEKESLTEEEA 116
Query: 202 CCIIRQLHSALHCLHSQQIAHKDIRPENI-LMNGAV----LKLIDLGXX-----XXXXXX 251
++Q+ + ++ LHS QIAH D++PENI L++ V +K+ID G
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN 176
Query: 252 XLPDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYS 311
F +PE++ G DMWS+GV+ YILLSG SPFL ++++ET A++S +Y
Sbjct: 177 IFGTPAFVAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
Query: 312 FPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW 350
F E + S A++ I +LL KR T LQ W
Sbjct: 236 FEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPW 274
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 137 bits (346), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 149/277 (53%), Gaps = 25/277 (9%)
Query: 93 WQQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRA------- 145
++Q++ E Y+ E LG+G+F V+K R++ TG A K I ++RQ + R
Sbjct: 5 FKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFI-KKRQSRASRRGVSREEIE 63
Query: 146 -EYNLLSTLMHAHIPTALALFENAPVPGTDTI-VMQLVHGESLIQHLCRQSTITESYICC 203
E ++L ++H ++ T ++EN TD + +++LV G L L ++ +++E
Sbjct: 64 REVSILRQVLHHNVITLHDVYENR----TDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 204 IIRQLHSALHCLHSQQIAHKDIRPENI-LMNGAV----LKLIDLGXX-----XXXXXXXL 253
I+Q+ ++ LH+++IAH D++PENI L++ + +KLID G
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF 179
Query: 254 PDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFP 313
EF +PE++ G DMWS+GV+ YILLSG SPFL ++++ET A+I+ Y F
Sbjct: 180 GTPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFD 238
Query: 314 PEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW 350
E H S A++ I +LL KR T + L+ W
Sbjct: 239 EEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 137 bits (345), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 149/277 (53%), Gaps = 25/277 (9%)
Query: 93 WQQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRA------- 145
++Q++ E Y+ E LG+G+F V+K R++ TG A K I ++RQ + R
Sbjct: 5 FKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFI-KKRQSRASRRGVSREEIE 63
Query: 146 -EYNLLSTLMHAHIPTALALFENAPVPGTDTI-VMQLVHGESLIQHLCRQSTITESYICC 203
E ++L ++H ++ T ++EN TD + +++LV G L L ++ +++E
Sbjct: 64 REVSILRQVLHHNVITLHDVYENR----TDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 204 IIRQLHSALHCLHSQQIAHKDIRPENI-LMNGAV----LKLIDLGXX-----XXXXXXXL 253
I+Q+ ++ LH+++IAH D++PENI L++ + +KLID G
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF 179
Query: 254 PDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFP 313
EF +PE++ G DMWS+GV+ YILLSG SPFL ++++ET A+I+ Y F
Sbjct: 180 GTPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFD 238
Query: 314 PEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW 350
E H S A++ I +LL KR T + L+ W
Sbjct: 239 EEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 149/277 (53%), Gaps = 25/277 (9%)
Query: 93 WQQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRA------- 145
++Q++ E Y+ E LG+G+F V+K R++ TG A K I ++RQ + R
Sbjct: 5 FKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFI-KKRQSRASRRGVSREEIE 63
Query: 146 -EYNLLSTLMHAHIPTALALFENAPVPGTDTI-VMQLVHGESLIQHLCRQSTITESYICC 203
E ++L ++H ++ T ++EN TD + +++LV G L L ++ +++E
Sbjct: 64 REVSILRQVLHHNVITLHDVYENR----TDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 204 IIRQLHSALHCLHSQQIAHKDIRPENI-LMNGAV----LKLIDLGXX-----XXXXXXXL 253
I+Q+ ++ LH+++IAH D++PENI L++ + +KLID G
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF 179
Query: 254 PDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFP 313
EF +PE++ G DMWS+GV+ YILLSG SPFL ++++ET A+I+ Y F
Sbjct: 180 GTPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFD 238
Query: 314 PEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW 350
E H S A++ I +LL KR T + L+ W
Sbjct: 239 EEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 148/277 (53%), Gaps = 25/277 (9%)
Query: 93 WQQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRA------- 145
++Q++ E Y+ E LG+G+F V+K R++ TG A K I ++RQ + R
Sbjct: 5 FKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFI-KKRQSRASRRGVCREEIE 63
Query: 146 -EYNLLSTLMHAHIPTALALFENAPVPGTDTI-VMQLVHGESLIQHLCRQSTITESYICC 203
E ++L ++H +I T ++EN TD + +++LV G L L ++ +++E
Sbjct: 64 REVSILRQVLHPNIITLHDVYENR----TDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 204 IIRQLHSALHCLHSQQIAHKDIRPENI-LMNGAV----LKLIDLGXX-----XXXXXXXL 253
I+Q+ ++ LH+++IAH D++PENI L++ + +KLID G
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF 179
Query: 254 PDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFP 313
EF +PE++ G DMWS+GV+ YILLSG SPFL ++++ET A+I+ Y F
Sbjct: 180 GTPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFD 238
Query: 314 PEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW 350
E S A++ I +LL KR T + L+ W
Sbjct: 239 EEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 148/277 (53%), Gaps = 25/277 (9%)
Query: 93 WQQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRA------- 145
++Q++ E Y+ E LG+G+F V+K R++ TG A K I ++RQ + R
Sbjct: 5 FKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFI-KKRQSRASRRGVSREEIE 63
Query: 146 -EYNLLSTLMHAHIPTALALFENAPVPGTDTI-VMQLVHGESLIQHLCRQSTITESYICC 203
E ++L ++H ++ T ++EN TD + +++LV G L L ++ +++E
Sbjct: 64 REVSILRQVLHHNVITLHDVYENR----TDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 204 IIRQLHSALHCLHSQQIAHKDIRPENI-LMNGAV----LKLIDLGXX-----XXXXXXXL 253
I+Q+ ++ LH+++IAH D++PENI L++ + +KLID G
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF 179
Query: 254 PDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFP 313
EF +PE++ G DMWS+GV+ YILLSG SPFL ++++ET A+I+ Y F
Sbjct: 180 GTPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFD 238
Query: 314 PEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW 350
E S A++ I +LL KR T + L+ W
Sbjct: 239 EEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 148/277 (53%), Gaps = 25/277 (9%)
Query: 93 WQQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRA------- 145
++Q++ E Y+ E LG+G+F V+K R++ TG A K I ++RQ + R
Sbjct: 5 FKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFI-KKRQSRASRRGVSREEIE 63
Query: 146 -EYNLLSTLMHAHIPTALALFENAPVPGTDTI-VMQLVHGESLIQHLCRQSTITESYICC 203
E ++L ++H ++ T ++EN TD + +++LV G L L ++ +++E
Sbjct: 64 REVSILRQVLHHNVITLHDVYENR----TDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 204 IIRQLHSALHCLHSQQIAHKDIRPENI-LMNGAV----LKLIDLGXX-----XXXXXXXL 253
I+Q+ ++ LH+++IAH D++PENI L++ + +KLID G
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF 179
Query: 254 PDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFP 313
EF +PE++ G DMWS+GV+ YILLSG SPFL ++++ET A+I+ Y F
Sbjct: 180 GTPEFVAPEIVNYEPL-GLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFD 238
Query: 314 PEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW 350
E S A++ I +LL KR T + L+ W
Sbjct: 239 EEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPW 275
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 128/281 (45%), Gaps = 17/281 (6%)
Query: 90 ETRWQQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRA---E 146
E + Q F RY + LG G F V K +DR T Q A+K I + + T E
Sbjct: 12 ENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILRE 71
Query: 147 YNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIR 206
LL L H P + LFE + IV +L G L + ++ +E II+
Sbjct: 72 VELLKKLDH---PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIK 128
Query: 207 QLHSALHCLHSQQIAHKDIRPENILMNGAV----LKLIDLGXXX-----XXXXXXLPDLE 257
Q+ S + +H I H+D++PENIL+ +K+ID G +
Sbjct: 129 QVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAY 188
Query: 258 FASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQC 317
+ +PE+L T D+WS GV+LYILLSG PF ++E + + Y+F Q
Sbjct: 189 YIAPEVLR--GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQW 246
Query: 318 GHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEASCSE 358
IS A++LI ++L H R TA Q L+ W + S E
Sbjct: 247 RTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSEE 287
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 127/278 (45%), Gaps = 17/278 (6%)
Query: 90 ETRWQQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRA---E 146
E + Q F RY + LG G F V K +DR T Q A+K I + + T E
Sbjct: 12 ENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILRE 71
Query: 147 YNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIR 206
LL L H P + LFE + IV +L G L + ++ +E II+
Sbjct: 72 VELLKKLDH---PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIK 128
Query: 207 QLHSALHCLHSQQIAHKDIRPENILMNGAV----LKLIDLGXXX-----XXXXXXLPDLE 257
Q+ S + +H I H+D++PENIL+ +K+ID G +
Sbjct: 129 QVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAY 188
Query: 258 FASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQC 317
+ +PE+L T D+WS GV+LYILLSG PF ++E + + Y+F Q
Sbjct: 189 YIAPEVLR--GTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQW 246
Query: 318 GHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEAS 355
IS A++LI ++L H R TA Q L+ W + S
Sbjct: 247 RTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYS 284
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 121 bits (304), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 127/278 (45%), Gaps = 17/278 (6%)
Query: 90 ETRWQQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRA---E 146
E + Q F RY + LG G F V K +DR T Q A+K I + + T E
Sbjct: 12 ENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILRE 71
Query: 147 YNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIR 206
LL L H P + LFE + IV +L G L + ++ +E II+
Sbjct: 72 VELLKKLDH---PNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIK 128
Query: 207 QLHSALHCLHSQQIAHKDIRPENILMNGAV----LKLIDLGXXX-----XXXXXXLPDLE 257
Q+ S + +H I H+D++PENIL+ +K+ID G +
Sbjct: 129 QVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAY 188
Query: 258 FASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQC 317
+ +PE+L T D+WS GV+LYILLSG PF ++E + + Y+F Q
Sbjct: 189 YIAPEVL--RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQW 246
Query: 318 GHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEAS 355
IS A++LI ++L H R TA Q L+ W + S
Sbjct: 247 RTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYS 284
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/298 (30%), Positives = 137/298 (45%), Gaps = 27/298 (9%)
Query: 98 FEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRE----RQPQQITRAEYNLLSTL 153
F+ Y+ E LG G F VR+ GQ A K I + R Q++ R E + L
Sbjct: 20 FQSMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLER-EARICRLL 78
Query: 154 MHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYIC-CIIRQLHSAL 212
H P + L ++ G ++ LV G L + + + +E+ CI + L + L
Sbjct: 79 KH---PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVL 135
Query: 213 HCLHSQQIAHKDIRPENILM----NGAVLKLIDLGXXXXXXXXXLPDLEFA------SPE 262
HC H + H+D++PEN+L+ GA +KL D G FA SPE
Sbjct: 136 HC-HQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPE 194
Query: 263 MLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISV 322
+L P D+W+ GV+LYILL G PF DE + I Y FP + ++
Sbjct: 195 VLRKDPYGKP-VDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTP 253
Query: 323 PARELIGQLLNTHADKRPTAGQLLQVAWFAE----ASC--SEFDTERLLPFSARRKQK 374
A++LI ++L + KR TA + L+ W + ASC + + L F+ARRK K
Sbjct: 254 EAKDLINKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLK 311
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 132/294 (44%), Gaps = 27/294 (9%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRE----RQPQQITRAEYNLLSTLMHAH 157
Y+ E LG G F VR+ TGQ A K I + R Q++ R E + L H
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLER-EARICRLLKH-- 62
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYIC-CIIRQLHSALHCLH 216
P + L ++ G +V LV G L + + + +E+ CI + L S HC H
Sbjct: 63 -PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHC-H 120
Query: 217 SQQIAHKDIRPENILM----NGAVLKLIDLGXXXXXXXXXLPDLEFA------SPEMLTS 266
I H+D++PEN+L+ GA +KL D G FA SPE+L
Sbjct: 121 LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRK 180
Query: 267 PATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 326
P DMW+ GV+LYILL G PF DE + I Y FP + ++ A++
Sbjct: 181 DPYGKP-VDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKD 239
Query: 327 LIGQLLNTHADKRPTAGQLLQVAWFAEASCSEFDTER------LLPFSARRKQK 374
LI ++L + KR TA + L+ W + S R L F+ARRK K
Sbjct: 240 LINKMLTINPAKRITASEALKHPWICQRSTVASMMHRQETVDCLKKFNARRKLK 293
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 94/294 (31%), Positives = 132/294 (44%), Gaps = 27/294 (9%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRE----RQPQQITRAEYNLLSTLMHAH 157
Y+ E LG G F VR+ TGQ A K I + R Q++ R E + L H
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLER-EARICRLLKH-- 62
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYIC-CIIRQLHSALHCLH 216
P + L ++ G +V LV G L + + + +E+ CI + L S HC H
Sbjct: 63 -PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHC-H 120
Query: 217 SQQIAHKDIRPENILM----NGAVLKLIDLGXXXXXXXXXLPDLEFA------SPEMLTS 266
I H+D++PEN+L+ GA +KL D G FA SPE+L
Sbjct: 121 LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRK 180
Query: 267 PATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 326
P DMW+ GV+LYILL G PF DE + I Y FP + ++ A++
Sbjct: 181 DPYGKP-VDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKD 239
Query: 327 LIGQLLNTHADKRPTAGQLLQVAWFAEASCSEFDTER------LLPFSARRKQK 374
LI ++L + KR TA + L+ W + S R L F+ARRK K
Sbjct: 240 LINKMLTINPAKRITASEALKHPWICQRSTVASMMHRQETVDCLKKFNARRKLK 293
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/298 (30%), Positives = 134/298 (44%), Gaps = 25/298 (8%)
Query: 97 QFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRE----RQPQQITRAEYNLLST 152
+F Y+ E LG G F VR+ + Q A K I + R Q++ R E +
Sbjct: 28 RFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLER-EARICRL 86
Query: 153 LMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSAL 212
L H P + L ++ G +V LV G L + + + +E+ I Q+ ++
Sbjct: 87 LKH---PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESV 143
Query: 213 HCLHSQQIAHKDIRPENILM----NGAVLKLIDLGXXXXXXXXXLPDLEFA------SPE 262
+ +H I H+D++PEN+L+ GA +KL D G FA SPE
Sbjct: 144 NHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPE 203
Query: 263 MLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISV 322
+L P D+W+ GV+LYILL G PF DE + + I Y FP + ++
Sbjct: 204 VLRKDPYGKP-VDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTP 262
Query: 323 PARELIGQLLNTHADKRPTAGQLLQVAWFAEASC------SEFDTERLLPFSARRKQK 374
A+ LI Q+L + KR TA Q L+ W + S + E L F+ARRK K
Sbjct: 263 EAKNLINQMLTINPAKRITADQALKHPWVCQRSTVASMMHRQETVECLRKFNARRKLK 320
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 117 bits (294), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 92/294 (31%), Positives = 136/294 (46%), Gaps = 27/294 (9%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRE----RQPQQITRAEYNLLSTLMHAH 157
Y+ E +G G F VR+ TG A K I + R Q++ R E + L H++
Sbjct: 6 YQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLER-EARICRLLKHSN 64
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYIC-CIIRQLHSALHCLH 216
I + L ++ G +V LV G L + + + +E+ CI + L + LHC H
Sbjct: 65 I---VRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHC-H 120
Query: 217 SQQIAHKDIRPENILM----NGAVLKLIDLGXXXXXXXXXLPDLEFA------SPEMLTS 266
+ H+D++PEN+L+ GA +KL D G FA SPE+L
Sbjct: 121 QMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRK 180
Query: 267 PATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 326
A P D+W+ GV+LYILL G PF DE + + I Y FP + ++ A+
Sbjct: 181 EAYGKP-VDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKN 239
Query: 327 LIGQLLNTHADKRPTAGQLLQVAWFAEASC------SEFDTERLLPFSARRKQK 374
LI Q+L + KR TA + L+ W + S + E L F+ARRK K
Sbjct: 240 LINQMLTINPAKRITAHEALKHPWVCQRSTVASMMHRQETVECLKKFNARRKLK 293
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 126/270 (46%), Gaps = 15/270 (5%)
Query: 94 QQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRE--RQPQQITRAEYNLLS 151
Q E + +E E LG G F V A ++ TG+L A+K IP++ + + E +L
Sbjct: 16 QAEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLR 75
Query: 152 TLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSA 211
+ H +I ++E+ P +VMQLV G L + + TE +IRQ+ A
Sbjct: 76 KIKHENIVALEDIYES---PNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDA 132
Query: 212 LHCLHSQQIAHKDIRPENILMNG----AVLKLIDLGXXXXXXXXXLPDLE-----FASPE 262
++ LH I H+D++PEN+L + + + D G + + +PE
Sbjct: 133 VYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPE 192
Query: 263 MLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISV 322
+L + + D WS+GV+ YILL G PF DE++ + I A+Y F IS
Sbjct: 193 VLAQKPYS-KAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISD 251
Query: 323 PARELIGQLLNTHADKRPTAGQLLQVAWFA 352
A++ I L+ +KR T Q + W A
Sbjct: 252 SAKDFIRNLMEKDPNKRYTCEQAARHPWIA 281
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 136/299 (45%), Gaps = 27/299 (9%)
Query: 97 QFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRE----RQPQQITRAEYNLLST 152
+F Y+ E LG G F VR+ GQ A I + R Q++ R E +
Sbjct: 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLER-EARICRL 66
Query: 153 LMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYIC-CIIRQLHSA 211
L H P + L ++ G ++ LV G L + + + +E+ CI + L +
Sbjct: 67 LKH---PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAV 123
Query: 212 LHCLHSQQIAHKDIRPENILM----NGAVLKLIDLGXXXXXXXXXLPDLEFA------SP 261
LHC H + H++++PEN+L+ GA +KL D G FA SP
Sbjct: 124 LHC-HQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSP 182
Query: 262 EMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHIS 321
E+L P D+W+ GV+LYILL G PF DE + I Y FP + ++
Sbjct: 183 EVLRKDPYGKP-VDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVT 241
Query: 322 VPARELIGQLLNTHADKRPTAGQLLQVAWFAE----ASC--SEFDTERLLPFSARRKQK 374
A++LI ++L + KR TA + L+ W + ASC + + L F+ARRK K
Sbjct: 242 PEAKDLINKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLK 300
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 137/302 (45%), Gaps = 34/302 (11%)
Query: 97 QFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRE----RQPQQITRAEYNLLST 152
+F Y+ E LG G F VR+ + TG A K I + R Q++ R E +
Sbjct: 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER-EARICRK 84
Query: 153 LMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSAL 212
L H P + L ++ +V LV G L + + + +E+ I+Q+ ++
Sbjct: 85 LQH---PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESI 141
Query: 213 HCLHSQQIAHKDIRPENILM----NGAVLKLIDLGXXXXXXXXXLPDLE----------F 258
HS I H++++PEN+L+ GA +KL D G + D E +
Sbjct: 142 AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIE-----VNDSEAWHGFAGTPGY 196
Query: 259 ASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCG 318
SPE+L + P D+W+ GV+LYILL G PF DE + A I Y +P +
Sbjct: 197 LSPEVLKKDPYSKP-VDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWD 255
Query: 319 HISVPARELIGQLLNTHADKRPTAGQLLQVAWF------AEASCSEFDTERLLPFSARRK 372
++ A+ LI +L + KR TA Q L+V W A A + + L F+ARRK
Sbjct: 256 TVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERVASAIHRQDTVDCLKKFNARRK 315
Query: 373 QK 374
K
Sbjct: 316 LK 317
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 128/263 (48%), Gaps = 21/263 (7%)
Query: 107 RLGNGRFCTVRKARDRGTGQLVALKQIPRERQ--PQQITRAEYNLLSTLMHAHIPTALAL 164
+LG+G F V +R +G +K I ++R P + AE +L +L H +I +
Sbjct: 29 KLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEV 88
Query: 165 FENAPVPGTDTIVMQLVHGESLIQHL----CRQSTITESYICCIIRQLHSALHCLHSQQI 220
FE+ IVM+ G L++ + R ++E Y+ +++Q+ +AL HSQ +
Sbjct: 89 FEDY---HNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHV 145
Query: 221 AHKDIRPENILMNGAV----LKLIDLG-----XXXXXXXXXLPDLEFASPEMLTSPATAG 271
HKD++PENIL +K+ID G + +PE+ T
Sbjct: 146 VHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKRDVTF- 204
Query: 272 PSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQL 331
D+WS GV++Y LL+G PF S EE + + + ++ E C ++ A +L+ Q+
Sbjct: 205 -KCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVE-CRPLTPQAVDLLKQM 262
Query: 332 LNTHADKRPTAGQLLQVAWFAEA 354
L ++RP+A Q+L WF +A
Sbjct: 263 LTKDPERRPSAAQVLHHEWFKQA 285
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 136/287 (47%), Gaps = 19/287 (6%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTA 161
+E LG G V + + +GT + ALK + ++ ++I R E +L L H +I
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALK-VLKKTVDKKIVRTEIGVLLRLSHPNIIKL 113
Query: 162 LALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQIA 221
+FE P ++V++LV G L + + +E ++Q+ A+ LH I
Sbjct: 114 KEIFET---PTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIV 170
Query: 222 HKDIRPENILMN----GAVLKLIDLGXXXXXXXXXLPDL-----EFASPEMLTSPATAGP 272
H+D++PEN+L A LK+ D G L + +PE+L A GP
Sbjct: 171 HRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAY-GP 229
Query: 273 STDMWSLGVLLYILLSGVSPFLDESEEE-TRAHISVADYSFPPEQCGHISVPARELIGQL 331
DMWS+G++ YILL G PF DE ++ I +Y F +S+ A++L+ +L
Sbjct: 230 EVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKL 289
Query: 332 LNTHADKRPTAGQLLQVAWFA--EASCSEFDT--ERLLPFSARRKQK 374
+ KR T Q LQ W A+ DT ++L F+ARRK K
Sbjct: 290 IVLDPKKRLTTFQALQHPWVTGKAANFVHMDTAQKKLQEFNARRKLK 336
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 127/258 (49%), Gaps = 14/258 (5%)
Query: 106 ERLGNGRFCTVRKARDRGTGQLVALKQIP-RERQPQQITRAEYNLLSTLMHAHIPTALAL 164
E LG GRF V K + TG +A K I R + ++ + E ++++ L HA++ + L
Sbjct: 95 EILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANL---IQL 151
Query: 165 FENAPVPGTDTIVMQLVHGESLIQHLCRQS-TITESYICCIIRQLHSALHCLHSQQIAHK 223
++ +VM+ V G L + +S +TE ++Q+ + +H I H
Sbjct: 152 YDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHL 211
Query: 224 DIRPENIL---MNGAVLKLIDLGXXXXXXXXXLPDLEFASPEMLTSPATAGPS-----TD 275
D++PENIL + +K+ID G + F +PE L +P TD
Sbjct: 212 DLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFL-APEVVNYDFVSFPTD 270
Query: 276 MWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTH 335
MWS+GV+ Y+LLSG+SPFL +++ ET +I + E+ IS A+E I +LL
Sbjct: 271 MWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKE 330
Query: 336 ADKRPTAGQLLQVAWFAE 353
R +A + L+ W ++
Sbjct: 331 KSWRISASEALKHPWLSD 348
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 125/272 (45%), Gaps = 28/272 (10%)
Query: 97 QFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRE----RQPQQITRAEYNLLST 152
+F Y+ E LG G F VR+ + TG A K I + R Q++ R E +
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER-EARICRK 61
Query: 153 LMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSAL 212
L H P + L ++ +V LV G L + + + +E+ I+Q+ ++
Sbjct: 62 LQH---PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESI 118
Query: 213 HCLHSQQIAHKDIRPENILM----NGAVLKLIDLGXXXXXXXXXLPDLE----------F 258
HS I H++++PEN+L+ GA +KL D G + D E +
Sbjct: 119 AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIE-----VNDSEAWHGFAGTPGY 173
Query: 259 ASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCG 318
SPE+L + P D+W+ GV+LYILL G PF DE + A I Y +P +
Sbjct: 174 LSPEVLKKDPYSKP-VDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWD 232
Query: 319 HISVPARELIGQLLNTHADKRPTAGQLLQVAW 350
++ A+ LI +L + KR TA Q L+V W
Sbjct: 233 TVTPEAKSLIDSMLTVNPKKRITADQALKVPW 264
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 125/272 (45%), Gaps = 28/272 (10%)
Query: 97 QFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRE----RQPQQITRAEYNLLST 152
+F Y+ E LG G F VR+ + TG A K I + R Q++ R E +
Sbjct: 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER-EARICRK 61
Query: 153 LMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSAL 212
L H P + L ++ +V LV G L + + + +E+ I+Q+ ++
Sbjct: 62 LQH---PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESI 118
Query: 213 HCLHSQQIAHKDIRPENILM----NGAVLKLIDLGXXXXXXXXXLPDLE----------F 258
HS I H++++PEN+L+ GA +KL D G + D E +
Sbjct: 119 AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIE-----VNDSEAWHGFAGTPGY 173
Query: 259 ASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCG 318
SPE+L + P D+W+ GV+LYILL G PF DE + A I Y +P +
Sbjct: 174 LSPEVLKKDPYSKP-VDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWD 232
Query: 319 HISVPARELIGQLLNTHADKRPTAGQLLQVAW 350
++ A+ LI +L + KR TA Q L+V W
Sbjct: 233 TVTPEAKSLIDSMLTVNPKKRITADQALKVPW 264
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 125/272 (45%), Gaps = 28/272 (10%)
Query: 97 QFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRE----RQPQQITRAEYNLLST 152
+F Y+ E LG G F VR+ + TG A K I + R Q++ R E +
Sbjct: 2 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER-EARICRK 60
Query: 153 LMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSAL 212
L H P + L ++ +V LV G L + + + +E+ I+Q+ ++
Sbjct: 61 LQH---PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESI 117
Query: 213 HCLHSQQIAHKDIRPENILM----NGAVLKLIDLGXXXXXXXXXLPDLE----------F 258
HS I H++++PEN+L+ GA +KL D G + D E +
Sbjct: 118 AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIE-----VNDSEAWHGFAGTPGY 172
Query: 259 ASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCG 318
SPE+L + P D+W+ GV+LYILL G PF DE + A I Y +P +
Sbjct: 173 LSPEVLKKDPYSKP-VDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWD 231
Query: 319 HISVPARELIGQLLNTHADKRPTAGQLLQVAW 350
++ A+ LI +L + KR TA Q L+V W
Sbjct: 232 TVTPEAKSLIDSMLTVNPKKRITADQALKVPW 263
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 110 bits (276), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 122/261 (46%), Gaps = 11/261 (4%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPT 160
+Y E LG G F V + + + + K + + Q + + E ++L+ H +I
Sbjct: 6 KYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNI-- 63
Query: 161 ALALFENAPVPGTDTIVMQLVHGESLIQHLCRQS-TITESYICCIIRQLHSALHCLHSQQ 219
L L E+ ++ + + G + + + + + E I + Q+ AL LHS
Sbjct: 64 -LHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHN 122
Query: 220 IAHKDIRPENILMN---GAVLKLIDLGXXXXXXXXXLPDLEFASPEMLTSPA----TAGP 272
I H DIRPENI+ + +K+I+ G L F +PE
Sbjct: 123 IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVST 182
Query: 273 STDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLL 332
+TDMWSLG L+Y+LLSG++PFL E+ ++ +I A+Y+F E IS+ A + + +LL
Sbjct: 183 ATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLL 242
Query: 333 NTHADKRPTAGQLLQVAWFAE 353
R TA + LQ W +
Sbjct: 243 VKERKSRMTASEALQHPWLKQ 263
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 129/288 (44%), Gaps = 18/288 (6%)
Query: 79 NEYKVLYT------VPFETRWQQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQ 132
N+Y Y VP +Q Y+ LE LG+G F V + ++ TG++ K
Sbjct: 24 NDYDKFYEDIWKKYVPQPVEVKQGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKF 83
Query: 133 IPRERQPQQITRAEYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR 192
I + T N +S + H P + L + ++++ + G L +
Sbjct: 84 INTPYPLDKYTVK--NEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAA 141
Query: 193 QS-TITESYICCIIRQLHSALHCLHSQQIAHKDIRPENIL---MNGAVLKLIDLGXXXXX 248
+ ++E+ + +RQ L +H I H DI+PENI+ + +K+ID G
Sbjct: 142 EDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKL 201
Query: 249 XXXXLPDL-----EFASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRA 303
+ + EFA+PE++ G TDMW++GVL Y+LLSG+SPF E + ET
Sbjct: 202 NPDEIVKVTTATAEFAAPEIVDR-EPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQ 260
Query: 304 HISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF 351
++ D+ F + +S A++ I LL KR T L+ W
Sbjct: 261 NVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWL 308
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 124/271 (45%), Gaps = 12/271 (4%)
Query: 92 RWQQ-EQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLL 150
RW+Q E Y+ + LG G F V A D+ T +LVA+K I +E + E N +
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSME-NEI 67
Query: 151 STLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHS 210
+ L P +AL + G ++MQLV G L + + TE +I Q+
Sbjct: 68 AVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD 127
Query: 211 ALHCLHSQQIAHKDIRPENILM----NGAVLKLIDLGXXXXXXXXXLPDLE-----FASP 261
A+ LH I H+D++PEN+L + + + D G + + +P
Sbjct: 128 AVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAP 187
Query: 262 EMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHIS 321
E+L + + D WS+GV+ YILL G PF DE++ + I A+Y F IS
Sbjct: 188 EVLAQKPYS-KAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDIS 246
Query: 322 VPARELIGQLLNTHADKRPTAGQLLQVAWFA 352
A++ I L+ +KR T Q LQ W A
Sbjct: 247 DSAKDFIRHLMEKDPEKRFTCEQALQHPWIA 277
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 124/271 (45%), Gaps = 12/271 (4%)
Query: 92 RWQQ-EQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLL 150
RW+Q E Y+ + LG G F V A D+ T +LVA+K I +E + E N +
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSME-NEI 67
Query: 151 STLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHS 210
+ L P +AL + G ++MQLV G L + + TE +I Q+
Sbjct: 68 AVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD 127
Query: 211 ALHCLHSQQIAHKDIRPENILM----NGAVLKLIDLGXXXXXXXXXLPDLE-----FASP 261
A+ LH I H+D++PEN+L + + + D G + + +P
Sbjct: 128 AVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAP 187
Query: 262 EMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHIS 321
E+L + + D WS+GV+ YILL G PF DE++ + I A+Y F IS
Sbjct: 188 EVLAQKPYS-KAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDIS 246
Query: 322 VPARELIGQLLNTHADKRPTAGQLLQVAWFA 352
A++ I L+ +KR T Q LQ W A
Sbjct: 247 DSAKDFIRHLMEKDPEKRFTCEQALQHPWIA 277
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 124/271 (45%), Gaps = 12/271 (4%)
Query: 92 RWQQ-EQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLL 150
RW+Q E Y+ + LG G F V A D+ T +LVA+K I +E + E N +
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSME-NEI 67
Query: 151 STLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHS 210
+ L P +AL + G ++MQLV G L + + TE +I Q+
Sbjct: 68 AVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD 127
Query: 211 ALHCLHSQQIAHKDIRPENILM----NGAVLKLIDLGXXXXXXXXXLPDLE-----FASP 261
A+ LH I H+D++PEN+L + + + D G + + +P
Sbjct: 128 AVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAP 187
Query: 262 EMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHIS 321
E+L + + D WS+GV+ YILL G PF DE++ + I A+Y F IS
Sbjct: 188 EVLAQKPYS-KAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDIS 246
Query: 322 VPARELIGQLLNTHADKRPTAGQLLQVAWFA 352
A++ I L+ +KR T Q LQ W A
Sbjct: 247 DSAKDFIRHLMEKDPEKRFTCEQALQHPWIA 277
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 121/266 (45%), Gaps = 18/266 (6%)
Query: 98 FEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRA----EYNLLSTL 153
F RY+ LG G F V +D+ TGQ A+K I + + Q+ + E LL L
Sbjct: 30 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 89
Query: 154 MHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALH 213
H P + L+E G +V ++ G L + + +E IIRQ+ S +
Sbjct: 90 DH---PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGIT 146
Query: 214 CLHSQQIAHKDIRPENILM----NGAVLKLIDLG-----XXXXXXXXXLPDLEFASPEML 264
+H +I H+D++PEN+L+ A +++ID G + + +PE+L
Sbjct: 147 YMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL 206
Query: 265 TSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPA 324
T D+WS GV+LYILLSG PF +E + + Y+F Q +S A
Sbjct: 207 --HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESA 264
Query: 325 RELIGQLLNTHADKRPTAGQLLQVAW 350
++LI ++L R +A L W
Sbjct: 265 KDLIRKMLTYVPSMRISARDALDHEW 290
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 121/266 (45%), Gaps = 18/266 (6%)
Query: 98 FEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRA----EYNLLSTL 153
F RY+ LG G F V +D+ TGQ A+K I + + Q+ + E LL L
Sbjct: 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 154 MHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALH 213
H P + L+E G +V ++ G L + + +E IIRQ+ S +
Sbjct: 84 DH---PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGIT 140
Query: 214 CLHSQQIAHKDIRPENILM----NGAVLKLIDLG-----XXXXXXXXXLPDLEFASPEML 264
+H +I H+D++PEN+L+ A +++ID G + + +PE+L
Sbjct: 141 YMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL 200
Query: 265 TSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPA 324
T D+WS GV+LYILLSG PF +E + + Y+F Q +S A
Sbjct: 201 --HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESA 258
Query: 325 RELIGQLLNTHADKRPTAGQLLQVAW 350
++LI ++L R +A L W
Sbjct: 259 KDLIRKMLTYVPSMRISARDALDHEW 284
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 133/302 (44%), Gaps = 21/302 (6%)
Query: 72 TYTFCINNEYKVLYTVPFETRWQQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALK 131
Y F I +K Y P E + + Y+ E LG G F V + +R TG A K
Sbjct: 28 NYVFDI---WKQYYPQPVEIK--HDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAK 82
Query: 132 QI--PRERQPQQITRAEYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQH 189
+ P E + + R E +S L H PT + L + ++ + + G L +
Sbjct: 83 FVMTPHESDKETV-RKEIQTMSVLRH---PTLVNLHDAFEDDNEMVMIYEFMSGGELFEK 138
Query: 190 LCRQ-STITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILMN---GAVLKLIDLGXX 245
+ + + ++E +RQ+ L +H H D++PENI+ LKLID G
Sbjct: 139 VADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLT 198
Query: 246 -----XXXXXXXLPDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEE 300
EFA+PE+ G TDMWS+GVL YILLSG+SPF E+++E
Sbjct: 199 AHLDPKQSVKVTTGTAEFAAPEVAEG-KPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE 257
Query: 301 TRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEASCSEFD 360
T ++ D++ IS ++ I +LL + R T Q L+ W + D
Sbjct: 258 TLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRD 317
Query: 361 TE 362
++
Sbjct: 318 SQ 319
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 135/303 (44%), Gaps = 31/303 (10%)
Query: 98 FEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER---QPQQIT---RAEYNLLS 151
FE YE E +G G F VR+ +R TGQ A+K + + P T + E ++
Sbjct: 22 FEDVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICH 81
Query: 152 TLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQS----TITESYICCIIRQ 207
L H HI + L E G +V + + G L + +++ +E+ +RQ
Sbjct: 82 MLKHPHI---VELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQ 138
Query: 208 LHSALHCLHSQQIAHKDIRPENILM----NGAVLKL------IDLGXXXXXXXXXLPDLE 257
+ AL H I H+D++PEN+L+ N A +KL I LG +
Sbjct: 139 ILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPH 198
Query: 258 FASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQC 317
F +PE++ P D+W GV+L+ILLSG PF ++E I Y P Q
Sbjct: 199 FMAPEVVKREPYGKP-VDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQW 256
Query: 318 GHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEASCSEFD------TERLLPFSARR 371
HIS A++L+ ++L +R T + L W E + E+L F+ARR
Sbjct: 257 SHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVEQLRKFNARR 316
Query: 372 KQK 374
K K
Sbjct: 317 KLK 319
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 133/302 (44%), Gaps = 21/302 (6%)
Query: 72 TYTFCINNEYKVLYTVPFETRWQQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALK 131
Y F I +K Y P E + + Y+ E LG G F V + +R TG A K
Sbjct: 134 NYVFDI---WKQYYPQPVEIK--HDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAK 188
Query: 132 QI--PRERQPQQITRAEYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQH 189
+ P E + + R E +S L H PT + L + ++ + + G L +
Sbjct: 189 FVMTPHESDKETV-RKEIQTMSVLRH---PTLVNLHDAFEDDNEMVMIYEFMSGGELFEK 244
Query: 190 LCRQ-STITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILMN---GAVLKLIDLGXX 245
+ + + ++E +RQ+ L +H H D++PENI+ LKLID G
Sbjct: 245 VADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLT 304
Query: 246 -----XXXXXXXLPDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEE 300
EFA+PE+ G TDMWS+GVL YILLSG+SPF E+++E
Sbjct: 305 AHLDPKQSVKVTTGTAEFAAPEVAEG-KPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE 363
Query: 301 TRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEASCSEFD 360
T ++ D++ IS ++ I +LL + R T Q L+ W + D
Sbjct: 364 TLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRD 423
Query: 361 TE 362
++
Sbjct: 424 SQ 425
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 121/266 (45%), Gaps = 18/266 (6%)
Query: 98 FEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRA----EYNLLSTL 153
F RY+ LG G F V +D+ TGQ A+K I + + Q+ + E LL L
Sbjct: 47 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 106
Query: 154 MHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALH 213
H P + L+E G +V ++ G L + + +E IIRQ+ S +
Sbjct: 107 DH---PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGIT 163
Query: 214 CLHSQQIAHKDIRPENILM----NGAVLKLIDLG-----XXXXXXXXXLPDLEFASPEML 264
+H +I H+D++PEN+L+ A +++ID G + + +PE+L
Sbjct: 164 YMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL 223
Query: 265 TSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPA 324
T D+WS GV+LYILLSG PF +E + + Y+F Q +S A
Sbjct: 224 --HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESA 281
Query: 325 RELIGQLLNTHADKRPTAGQLLQVAW 350
++LI ++L R +A L W
Sbjct: 282 KDLIRKMLTYVPSMRISARDALDHEW 307
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 124/271 (45%), Gaps = 12/271 (4%)
Query: 92 RWQQ-EQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLL 150
RW+Q E Y+ + LG G F V A D+ T +LVA+K I ++ + E N +
Sbjct: 9 RWKQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSME-NEI 67
Query: 151 STLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHS 210
+ L P +AL + G ++MQLV G L + + TE +I Q+
Sbjct: 68 AVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD 127
Query: 211 ALHCLHSQQIAHKDIRPENILM----NGAVLKLIDLGXXXXXXXXXLPDLE-----FASP 261
A+ LH I H+D++PEN+L + + + D G + + +P
Sbjct: 128 AVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAP 187
Query: 262 EMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHIS 321
E+L + + D WS+GV+ YILL G PF DE++ + I A+Y F IS
Sbjct: 188 EVLAQKPYS-KAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDIS 246
Query: 322 VPARELIGQLLNTHADKRPTAGQLLQVAWFA 352
A++ I L+ +KR T Q LQ W A
Sbjct: 247 DSAKDFIRHLMEKDPEKRFTCEQALQHPWIA 277
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 121/266 (45%), Gaps = 18/266 (6%)
Query: 98 FEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRA----EYNLLSTL 153
F RY+ LG G F V +D+ TGQ A+K I + + Q+ + E LL L
Sbjct: 48 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 107
Query: 154 MHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALH 213
H P + L+E G +V ++ G L + + +E IIRQ+ S +
Sbjct: 108 DH---PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGIT 164
Query: 214 CLHSQQIAHKDIRPENILM----NGAVLKLIDLG-----XXXXXXXXXLPDLEFASPEML 264
+H +I H+D++PEN+L+ A +++ID G + + +PE+L
Sbjct: 165 YMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL 224
Query: 265 TSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPA 324
T D+WS GV+LYILLSG PF +E + + Y+F Q +S A
Sbjct: 225 --HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESA 282
Query: 325 RELIGQLLNTHADKRPTAGQLLQVAW 350
++LI ++L R +A L W
Sbjct: 283 KDLIRKMLTYVPSMRISARDALDHEW 308
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 121/259 (46%), Gaps = 18/259 (6%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER----QPQQITRAEYNLLSTLMHAH 157
Y L+ +G G F V+ AR TG+ VA+K I + + Q++ R E ++ L H
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNH-- 72
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHS 217
P + LFE T +VM+ G + +L + E RQ+ SA+ H
Sbjct: 73 -PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 218 QQIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDL-----EFASPEMLTSPATAG 271
+ I H+D++ EN+L++ + +K+ D G D +A+PE+ G
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDG 191
Query: 272 PSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQL 331
P D+WSLGV+LY L+SG PF ++ +E R + Y P ++S L+ +
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP----FYMSTDCENLLKKF 247
Query: 332 LNTHADKRPTAGQLLQVAW 350
L + KR T Q+++ W
Sbjct: 248 LILNPSKRGTLEQIMKDRW 266
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 121/259 (46%), Gaps = 18/259 (6%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER----QPQQITRAEYNLLSTLMHAH 157
Y L+ +G G F V+ AR TG+ VA+K I + + Q++ R E ++ L H
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNH-- 72
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHS 217
P + LFE T +VM+ G + +L + E RQ+ SA+ H
Sbjct: 73 -PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 218 QQIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDL-----EFASPEMLTSPATAG 271
+ I H+D++ EN+L++ + +K+ D G D +A+PE+ G
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDG 191
Query: 272 PSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQL 331
P D+WSLGV+LY L+SG PF ++ +E R + Y P ++S L+ +
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP----FYMSTDCENLLKKF 247
Query: 332 LNTHADKRPTAGQLLQVAW 350
L + KR T Q+++ W
Sbjct: 248 LILNPSKRGTLEQIMKDRW 266
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 121/259 (46%), Gaps = 18/259 (6%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER----QPQQITRAEYNLLSTLMHAH 157
Y L+ +G G F V+ AR TG+ VA+K I + + Q++ R E ++ L H
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNH-- 72
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHS 217
P + LFE T +VM+ G + +L + E RQ+ SA+ H
Sbjct: 73 -PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 218 QQIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDL-----EFASPEMLTSPATAG 271
+ I H+D++ EN+L++ + +K+ D G D +A+PE+ G
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDG 191
Query: 272 PSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQL 331
P D+WSLGV+LY L+SG PF ++ +E R + Y P ++S L+ +
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP----FYMSTDCENLLKKF 247
Query: 332 LNTHADKRPTAGQLLQVAW 350
L + KR T Q+++ W
Sbjct: 248 LILNPSKRGTLEQIMKDRW 266
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 120/266 (45%), Gaps = 18/266 (6%)
Query: 98 FEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRA----EYNLLSTL 153
F RY+ LG G F V +D+ TGQ A+K I + + Q+ + E LL L
Sbjct: 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 154 MHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALH 213
H +I FE+ G +V ++ G L + + +E IIRQ+ S +
Sbjct: 84 DHPNIXKLYEFFED---KGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGIT 140
Query: 214 CLHSQQIAHKDIRPENILM----NGAVLKLIDLG-----XXXXXXXXXLPDLEFASPEML 264
H +I H+D++PEN+L+ A +++ID G + + +PE+L
Sbjct: 141 YXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVL 200
Query: 265 TSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPA 324
T D+WS GV+LYILLSG PF +E + + Y+F Q +S A
Sbjct: 201 --HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESA 258
Query: 325 RELIGQLLNTHADKRPTAGQLLQVAW 350
++LI + L R +A L W
Sbjct: 259 KDLIRKXLTYVPSXRISARDALDHEW 284
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 121/259 (46%), Gaps = 18/259 (6%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER----QPQQITRAEYNLLSTLMHAH 157
Y L+ +G G F V+ AR TG+ VA+K I + + Q++ R E ++ L H
Sbjct: 9 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNH-- 65
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHS 217
P + LFE T +VM+ G + +L + E RQ+ SA+ H
Sbjct: 66 -PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQ 124
Query: 218 QQIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDL-----EFASPEMLTSPATAG 271
+ I H+D++ EN+L++ + +K+ D G D +A+PE+ G
Sbjct: 125 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDG 184
Query: 272 PSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQL 331
P D+WSLGV+LY L+SG PF ++ +E R + Y P ++S L+ +
Sbjct: 185 PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF----YMSTDCENLLKKF 240
Query: 332 LNTHADKRPTAGQLLQVAW 350
L + KR T Q+++ W
Sbjct: 241 LILNPSKRGTLEQIMKDRW 259
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 136/291 (46%), Gaps = 18/291 (6%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPR---ERQPQQITRAEYNLLSTLMHAHI 158
Y+ +++LG+G + V RD+ T A+K I + E +L L H +I
Sbjct: 39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNI 98
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
FE+ +VM+ G L + + E II+Q+ S + LH
Sbjct: 99 MKLYDFFEDKR---NYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKH 155
Query: 219 QIAHKDIRPENILM----NGAVLKLIDLGXXX-----XXXXXXLPDLEFASPEMLTSPAT 269
I H+D++PEN+L+ A++K++D G L + +PE+L
Sbjct: 156 NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRKKYD 215
Query: 270 AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIG 329
D+WS+GV+L+ILL+G PF ++++E + Y+F + ++S A++LI
Sbjct: 216 --EKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIK 273
Query: 330 QLLNTHADKRPTAGQLLQVAWFAEASCSEFDTERLLPFSARRKQKFKEIQD 380
Q+L + +R +A Q L+ W E CS+ ++ LP A + ++ Q+
Sbjct: 274 QMLQFDSQRRISAQQALEHPWIKEM-CSKKESGIELPSLANAIENMRKFQN 323
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 121/258 (46%), Gaps = 16/258 (6%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER-QPQQITR--AEYNLLSTLMHAHI 158
Y L+ +G G F V+ AR TG+ VA+K I + + P + + E ++ L H
Sbjct: 14 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNH--- 70
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + LFE T ++M+ G + +L + E RQ+ SA+ H +
Sbjct: 71 PNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK 130
Query: 219 QIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDL-----EFASPEMLTSPATAGP 272
+I H+D++ EN+L++ + +K+ D G D +A+PE+ GP
Sbjct: 131 RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYDGP 190
Query: 273 STDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLL 332
D+WSLGV+LY L+SG PF ++ +E R + Y P ++S L+ + L
Sbjct: 191 EVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF----YMSTDCENLLKRFL 246
Query: 333 NTHADKRPTAGQLLQVAW 350
+ KR T Q+++ W
Sbjct: 247 VLNPIKRGTLEQIMKDRW 264
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 121/258 (46%), Gaps = 16/258 (6%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER-QPQQITR--AEYNLLSTLMHAHI 158
Y L+ +G G F V+ AR TG+ VA+K I + + P + + E ++ L H
Sbjct: 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNH--- 73
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + LFE T ++M+ G + +L + E RQ+ SA+ H +
Sbjct: 74 PNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK 133
Query: 219 QIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDL-----EFASPEMLTSPATAGP 272
+I H+D++ EN+L++ + +K+ D G D +A+PE+ GP
Sbjct: 134 RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGP 193
Query: 273 STDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLL 332
D+WSLGV+LY L+SG PF ++ +E R + Y P ++S L+ + L
Sbjct: 194 EVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF----YMSTDCENLLKRFL 249
Query: 333 NTHADKRPTAGQLLQVAW 350
+ KR T Q+++ W
Sbjct: 250 VLNPIKRGTLEQIMKDRW 267
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 121/259 (46%), Gaps = 18/259 (6%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER----QPQQITRAEYNLLSTLMHAH 157
Y L+ +G G F V+ AR TG+ VA++ I + + Q++ R E ++ L H
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNH-- 72
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHS 217
P + LFE T +VM+ G + +L + E RQ+ SA+ H
Sbjct: 73 -PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 218 QQIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDL-----EFASPEMLTSPATAG 271
+ I H+D++ EN+L++ + +K+ D G D +A+PE+ G
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDG 191
Query: 272 PSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQL 331
P D+WSLGV+LY L+SG PF ++ +E R + Y P ++S L+ +
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP----FYMSTDCENLLKKF 247
Query: 332 LNTHADKRPTAGQLLQVAW 350
L + KR T Q+++ W
Sbjct: 248 LILNPSKRGTLEQIMKDRW 266
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 119/262 (45%), Gaps = 17/262 (6%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITR--AEYNLLSTLMHAHIP 159
YE E +G G F V+ A TG++VA+K + + + R E L L H HI
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHIC 71
Query: 160 TALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQ 219
+ E A +V++ G L ++ Q ++E + RQ+ SA+ +HSQ
Sbjct: 72 QLYHVLETA---NKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQG 128
Query: 220 IAHKDIRPENILMNGA-VLKLIDLG-------XXXXXXXXXLPDLEFASPEMLTSPATAG 271
AH+D++PEN+L + LKLID G L +A+PE++ + G
Sbjct: 129 YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLG 188
Query: 272 PSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQL 331
D+WS+G+LLY+L+ G PF D++ I Y P +S + L+ Q+
Sbjct: 189 SEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPK----WLSPSSILLLQQM 244
Query: 332 LNTHADKRPTAGQLLQVAWFAE 353
L KR + LL W +
Sbjct: 245 LQVDPKKRISMKNLLNHPWIMQ 266
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 115/263 (43%), Gaps = 17/263 (6%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPT 160
RYE ++ +G G F R RD+ +LVA+K I R + + + E +L H P
Sbjct: 20 RYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRH---PN 76
Query: 161 ALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQI 220
+ E P IVM+ G L + +C +E +QL S + H+ Q+
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQV 136
Query: 221 AHKDIRPENILMNGA---VLKLIDLGXXXXXXXXXLPDL-----EFASPEMLTSPATAGP 272
AH+D++ EN L++G+ LK+ D G P + +PE+L G
Sbjct: 137 AHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLKKEYDGK 196
Query: 273 STDMWSLGVLLYILLSGVSPFLDESE----EETRAHISVADYSFPPEQCGHISVPARELI 328
D+WS GV LY++L G PF D E +T I Y+ P HIS R LI
Sbjct: 197 VADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIP--DYVHISPECRHLI 254
Query: 329 GQLLNTHADKRPTAGQLLQVAWF 351
++ KR + ++ WF
Sbjct: 255 SRIFVADPAKRISIPEIRNHEWF 277
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 122/260 (46%), Gaps = 20/260 (7%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER----QPQQITRAEYNLLSTLMHAH 157
Y L+ +G G F V+ AR TG+ VA++ I + + Q++ R E ++ L H
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNH-- 72
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHS 217
P + LFE T +VM+ G + +L + E RQ+ SA+ H
Sbjct: 73 -PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 218 QQIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDLEF------ASPEMLTSPATA 270
+ I H+D++ EN+L++ + +K+ D G D EF A+PE+
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLD-EFCGSPPYAAPELFQGKKYD 190
Query: 271 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 330
GP D+WSLGV+LY L+SG PF ++ +E R + Y P ++S L+ +
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP----FYMSTDCENLLKK 246
Query: 331 LLNTHADKRPTAGQLLQVAW 350
L + KR T Q+++ W
Sbjct: 247 FLILNPSKRGTLEQIMKDRW 266
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 116/263 (44%), Gaps = 17/263 (6%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPT 160
RYE ++ +G+G F R RD+ + +LVA+K I R + + + E +L H P
Sbjct: 19 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRH---PN 75
Query: 161 ALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQI 220
+ E P IVM+ G L + +C +E +QL S + H+ Q+
Sbjct: 76 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQV 135
Query: 221 AHKDIRPENILMNGA---VLKLIDLGXXXXXXXXXLPDL-----EFASPEMLTSPATAGP 272
H+D++ EN L++G+ LK+ D G P + +PE+L G
Sbjct: 136 CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGK 195
Query: 273 STDMWSLGVLLYILLSGVSPFLDESE----EETRAHISVADYSFPPEQCGHISVPARELI 328
D+WS GV LY++L G PF D E +T I Y+ P HIS R LI
Sbjct: 196 VADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIP--DYVHISPECRHLI 253
Query: 329 GQLLNTHADKRPTAGQLLQVAWF 351
++ KR + ++ WF
Sbjct: 254 SRIFVADPAKRISIPEIRNHEWF 276
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 123/271 (45%), Gaps = 19/271 (7%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRA----EYNLLSTLMHA 156
RY+ +++LG+G + V +D+ TG A+K I + E +L L H
Sbjct: 22 RYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHP 81
Query: 157 HIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLH 216
+I FE+ +VM++ G L + + +E I++Q+ S LH
Sbjct: 82 NIMKLYEFFEDKR---NYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLH 138
Query: 217 SQQIAHKDIRPENILMNG----AVLKLIDLGXXX-----XXXXXXLPDLEFASPEMLTSP 267
I H+D++PEN+L+ A++K++D G L + +PE+L
Sbjct: 139 KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKK 198
Query: 268 ATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAREL 327
D+WS GV+LYILL G PF ++++E + +SF P +S A++L
Sbjct: 199 YD--EKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQL 256
Query: 328 IGQLLNTHADKRPTAGQLLQVAWFAEASCSE 358
+ +L KR +A + L W + CS+
Sbjct: 257 VKLMLTYEPSKRISAEEALNHPWIVKF-CSQ 286
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 115/263 (43%), Gaps = 17/263 (6%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPT 160
RYE ++ +G+G F R RD+ + +LVA+K I R + + E +L H P
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLRH---PN 76
Query: 161 ALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQI 220
+ E P IVM+ G L + +C +E +QL S + H+ Q+
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQV 136
Query: 221 AHKDIRPENILMNGA---VLKLIDLGXXXXXXXXXLPDL-----EFASPEMLTSPATAGP 272
H+D++ EN L++G+ LK+ D G P + +PE+L G
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGK 196
Query: 273 STDMWSLGVLLYILLSGVSPFLDESE----EETRAHISVADYSFPPEQCGHISVPARELI 328
D+WS GV LY++L G PF D E +T I Y+ P HIS R LI
Sbjct: 197 VADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIP--DYVHISPECRHLI 254
Query: 329 GQLLNTHADKRPTAGQLLQVAWF 351
++ KR + ++ WF
Sbjct: 255 SRIFVADPAKRISIPEIRNHEWF 277
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 125/275 (45%), Gaps = 19/275 (6%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRA----EYNLLSTLMHA 156
RY+ +++LG+G + V +D+ TG A+K I + E +L L H
Sbjct: 5 RYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHP 64
Query: 157 HIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLH 216
+I FE+ +VM++ G L + + +E I++Q+ S LH
Sbjct: 65 NIMKLYEFFEDKR---NYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLH 121
Query: 217 SQQIAHKDIRPENILMNG----AVLKLIDLGXXX-----XXXXXXLPDLEFASPEMLTSP 267
I H+D++PEN+L+ A++K++D G L + +PE+L
Sbjct: 122 KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKK 181
Query: 268 ATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAREL 327
D+WS GV+LYILL G PF ++++E + +SF P +S A++L
Sbjct: 182 YD--EKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQL 239
Query: 328 IGQLLNTHADKRPTAGQLLQVAWFAEASCSEFDTE 362
+ +L KR +A + L W + CS+ T+
Sbjct: 240 VKLMLTYEPSKRISAEEALNHPWIVKF-CSQKHTD 273
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 127/263 (48%), Gaps = 19/263 (7%)
Query: 106 ERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAE--YNLLSTLMHAHIPTALA 163
+ LG G+F VR+ + TGQ A K + + R+ Q RAE + + + P +
Sbjct: 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQD-CRAEILHEIAVLELAKSCPRVIN 93
Query: 164 LFENAPVPGTDTIVMQLVHGESLIQHLCR---QSTITESYICCIIRQLHSALHCLHSQQI 220
L E ++++ G + LC ++E+ + +I+Q+ ++ LH I
Sbjct: 94 LHEVYENTSEIILILEYAAGGEIFS-LCLPELAEMVSENDVIRLIKQILEGVYYLHQNNI 152
Query: 221 AHKDIRPENILMNGAV----LKLIDLGXXXX-----XXXXXLPDLEFASPEMLT-SPATA 270
H D++P+NIL++ +K++D G + E+ +PE+L P T
Sbjct: 153 VHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITT 212
Query: 271 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 330
+TDMW++G++ Y+LL+ SPF+ E +ET +IS + + E +S A + I
Sbjct: 213 --ATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQS 270
Query: 331 LLNTHADKRPTAGQLLQVAWFAE 353
LL + +KRPTA L +W +
Sbjct: 271 LLVKNPEKRPTAEICLSHSWLQQ 293
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 133/303 (43%), Gaps = 31/303 (10%)
Query: 98 FEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER---QPQQIT---RAEYNLLS 151
FE YE E +G G F VR+ +R TGQ A+K + + P T + E ++
Sbjct: 22 FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICH 81
Query: 152 TLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQS----TITESYICCIIRQ 207
L H HI + L E G +V + + G L + +++ +E+ +RQ
Sbjct: 82 MLKHPHI---VELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQ 138
Query: 208 LHSALHCLHSQQIAHKDIRPENILM----NGAVLKL------IDLGXXXXXXXXXLPDLE 257
+ AL H I H+D++P +L+ N A +KL I LG +
Sbjct: 139 ILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPH 198
Query: 258 FASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQC 317
F +PE++ P D+W GV+L+ILLSG PF ++E I Y P Q
Sbjct: 199 FMAPEVVKREPYGKP-VDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQW 256
Query: 318 GHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEASCSEFD------TERLLPFSARR 371
HIS A++L+ ++L +R T + L W E + E+L F+ARR
Sbjct: 257 SHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVEQLRKFNARR 316
Query: 372 KQK 374
K K
Sbjct: 317 KLK 319
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 117/255 (45%), Gaps = 13/255 (5%)
Query: 105 LERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQIT-RAEYNLLSTLMHAHIPTALA 163
+E LG+G F V + R TG+L ALK I + + + E +L + H +I T
Sbjct: 14 MEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLED 73
Query: 164 LFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQIAHK 223
++E+ +VMQLV G L + + TE +I+Q+ SA+ LH I H+
Sbjct: 74 IYESTT---HYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHR 130
Query: 224 DIRPENILM----NGAVLKLIDLGXXXXXXXXXLPDL----EFASPEMLTSPATAGPSTD 275
D++PEN+L + + + D G + + +PE+L + + D
Sbjct: 131 DLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQKPYS-KAVD 189
Query: 276 MWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTH 335
WS+GV+ YILL G PF +E+E + I Y F IS A++ I LL
Sbjct: 190 CWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKD 249
Query: 336 ADKRPTAGQLLQVAW 350
++R T + L W
Sbjct: 250 PNERYTCEKALSHPW 264
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 125/268 (46%), Gaps = 26/268 (9%)
Query: 100 HRYEELER-LGNGRFCTVRKARDRGTGQLVALKQIPR------ERQPQQITRAEYNLLST 152
++Y LE +G G + V+ A +GT A K+IP+ +R Q+I ++ +
Sbjct: 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEI-----EIMKS 62
Query: 153 LMHAHIPTALALFENAPVPGTDT-IVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSA 211
L H +I FE+ TD +VM+L G L + + + ES I++ + SA
Sbjct: 63 LDHPNIIRLYETFED----NTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSA 118
Query: 212 LHCLHSQQIAHKDIRPENILM----NGAVLKLIDLGXXXXXXXXXLPDLEFASPEMLTSP 267
+ H +AH+D++PEN L + LKLID G + + +P SP
Sbjct: 119 VAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTP-YYVSP 177
Query: 268 ----ATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVP 323
GP D WS GV++Y+LL G PF ++ E I ++FP + ++S
Sbjct: 178 QVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQ 237
Query: 324 ARELIGQLLNTHADKRPTAGQLLQVAWF 351
A LI +LL +R T+ Q L+ WF
Sbjct: 238 AESLIRRLLTKSPKQRITSLQALEHEWF 265
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 133/303 (43%), Gaps = 31/303 (10%)
Query: 98 FEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER---QPQQIT---RAEYNLLS 151
FE YE E +G G F VR+ +R TGQ A+K + + P T + E ++
Sbjct: 24 FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICH 83
Query: 152 TLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQS----TITESYICCIIRQ 207
L H HI + L E G +V + + G L + +++ +E+ +RQ
Sbjct: 84 MLKHPHI---VELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQ 140
Query: 208 LHSALHCLHSQQIAHKDIRPENILM----NGAVLKL------IDLGXXXXXXXXXLPDLE 257
+ AL H I H+D++P +L+ N A +KL I LG +
Sbjct: 141 ILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPH 200
Query: 258 FASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQC 317
F +PE++ P D+W GV+L+ILLSG PF ++E I Y P Q
Sbjct: 201 FMAPEVVKREPYGKP-VDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQW 258
Query: 318 GHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEASCSEFD------TERLLPFSARR 371
HIS A++L+ ++L +R T + L W E + E+L F+ARR
Sbjct: 259 SHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVEQLRKFNARR 318
Query: 372 KQK 374
K K
Sbjct: 319 KLK 321
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 125/268 (46%), Gaps = 26/268 (9%)
Query: 100 HRYEELER-LGNGRFCTVRKARDRGTGQLVALKQIPR------ERQPQQITRAEYNLLST 152
++Y LE +G G + V+ A +GT A K+IP+ +R Q+I ++ +
Sbjct: 25 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEI-----EIMKS 79
Query: 153 LMHAHIPTALALFENAPVPGTDT-IVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSA 211
L H +I FE+ TD +VM+L G L + + + ES I++ + SA
Sbjct: 80 LDHPNIIRLYETFED----NTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSA 135
Query: 212 LHCLHSQQIAHKDIRPENILM----NGAVLKLIDLGXXXXXXXXXLPDLEFASPEMLTSP 267
+ H +AH+D++PEN L + LKLID G + + +P SP
Sbjct: 136 VAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTP-YYVSP 194
Query: 268 ----ATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVP 323
GP D WS GV++Y+LL G PF ++ E I ++FP + ++S
Sbjct: 195 QVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQ 254
Query: 324 ARELIGQLLNTHADKRPTAGQLLQVAWF 351
A LI +LL +R T+ Q L+ WF
Sbjct: 255 AESLIRRLLTKSPKQRITSLQALEHEWF 282
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 115/263 (43%), Gaps = 17/263 (6%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPT 160
RYE ++ +G+G F R RD+ + +LVA+K I R + + + E +L H P
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRH---PN 76
Query: 161 ALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQI 220
+ E P IVM+ G L + +C +E +QL S + H+ Q+
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQV 136
Query: 221 AHKDIRPENILMNGA---VLKLIDLGXXXXXXXXXLPDL-----EFASPEMLTSPATAGP 272
H+D++ EN L++G+ LK+ G P + +PE+L G
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGK 196
Query: 273 STDMWSLGVLLYILLSGVSPFLDESE----EETRAHISVADYSFPPEQCGHISVPARELI 328
D+WS GV LY++L G PF D E +T I Y+ P HIS R LI
Sbjct: 197 VADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIP--DYVHISPECRHLI 254
Query: 329 GQLLNTHADKRPTAGQLLQVAWF 351
++ KR + ++ WF
Sbjct: 255 SRIFVADPAKRISIPEIRNHEWF 277
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 120/251 (47%), Gaps = 20/251 (7%)
Query: 105 LERLGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQITRAEYNLLSTLMHAHIP 159
L + G G+ VRK TG++ A+K I R + T+AE N+L + H I
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 160 TALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQ 219
+ F+ G ++++ + G L L R+ E C + ++ AL LH +
Sbjct: 85 DLIYAFQTG---GKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKG 141
Query: 220 IAHKDIRPENILMN-GAVLKLIDLGX------XXXXXXXXLPDLEFASPEMLTSPATAGP 272
I ++D++PENI++N +KL D G +E+ +PE+L +
Sbjct: 142 IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMR-SGHNR 200
Query: 273 STDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLL 332
+ D WSLG L+Y +L+G PF E+ ++T I + PP +++ AR+L+ +LL
Sbjct: 201 AVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPP----YLTQEARDLLKKLL 256
Query: 333 NTHADKRPTAG 343
+A R AG
Sbjct: 257 KRNAASRLGAG 267
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 119/251 (47%), Gaps = 20/251 (7%)
Query: 105 LERLGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQITRAEYNLLSTLMHAHIP 159
L + G G+ VRK TG++ A+K I R + T+AE N+L + H I
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 160 TALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQ 219
+ F+ G ++++ + G L L R+ E C + ++ AL LH +
Sbjct: 85 DLIYAFQTG---GKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKG 141
Query: 220 IAHKDIRPENILMN-GAVLKLIDLGX------XXXXXXXXLPDLEFASPEMLTSPATAGP 272
I ++D++PENI++N +KL D G +E+ +PE+L +
Sbjct: 142 IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMR-SGHNR 200
Query: 273 STDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLL 332
+ D WSLG L+Y +L+G PF E+ ++T I + PP +++ AR+L+ +LL
Sbjct: 201 AVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPP----YLTQEARDLLKKLL 256
Query: 333 NTHADKRPTAG 343
+A R AG
Sbjct: 257 KRNAASRLGAG 267
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 115/263 (43%), Gaps = 17/263 (6%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPT 160
RYE ++ +G+G F R RD+ + +LVA+K I R + + + E +L H P
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRH---PN 76
Query: 161 ALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQI 220
+ E P IVM+ G L + +C +E +QL S + H+ Q+
Sbjct: 77 IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQV 136
Query: 221 AHKDIRPENILMNGA---VLKLIDLGXXXXXXXXXLPDL-----EFASPEMLTSPATAGP 272
H+D++ EN L++G+ LK+ G P + +PE+L G
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKKEYDGK 196
Query: 273 STDMWSLGVLLYILLSGVSPFLDESE----EETRAHISVADYSFPPEQCGHISVPARELI 328
D+WS GV LY++L G PF D E +T I Y+ P HIS R LI
Sbjct: 197 VADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIP--DYVHISPECRHLI 254
Query: 329 GQLLNTHADKRPTAGQLLQVAWF 351
++ KR + ++ WF
Sbjct: 255 SRIFVADPAKRISIPEIRNHEWF 277
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 120/265 (45%), Gaps = 22/265 (8%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTALALFEN 167
LG G F RK + + Q A+K I + + T+ E L L H P + L E
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEAN--TQKEITALK-LCEGH-PNIVKLHEV 74
Query: 168 APVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQIAHKDIRP 227
+VM+L++G L + + ++ +E+ I+R+L SA+ +H + H+D++P
Sbjct: 75 FHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKP 134
Query: 228 ENILM----NGAVLKLIDLGXXXXXXXXXLP------DLEFASPEMLTSPATAGPSTDMW 277
EN+L + +K+ID G P L +A+PE+L S D+W
Sbjct: 135 ENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGY-DESCDLW 193
Query: 278 SLGVLLYILLSGVSPFLDE-------SEEETRAHISVADYSFPPEQCGHISVPARELIGQ 330
SLGV+LY +LSG PF S E I D+SF E ++S A++LI
Sbjct: 194 SLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQG 253
Query: 331 LLNTHADKRPTAGQLLQVAWFAEAS 355
LL +KR L W + S
Sbjct: 254 LLTVDPNKRLKMSGLRYNEWLQDGS 278
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 135/319 (42%), Gaps = 63/319 (19%)
Query: 97 QFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER----QPQQITR--AEYNLL 150
+ + +Y +G G + VR A + T + A+K + + + P+ + R E L+
Sbjct: 23 ELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLM 82
Query: 151 STLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHL-------------------- 190
L H +I ++E+ +VM+L HG L+ L
Sbjct: 83 KKLHHPNIARLYEVYEDEQYI---CLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQI 139
Query: 191 -----CRQSTIT---------------ESYICCIIRQLHSALHCLHSQQIAHKDIRPENI 230
C + I E I I+RQ+ SALH LH+Q I H+DI+PEN
Sbjct: 140 CPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENF 199
Query: 231 LMNGAV---LKLIDLGXXXXXXXXXLPDLE----------FASPEML-TSPATAGPSTDM 276
L + +KL+D G + F +PE+L T+ + GP D
Sbjct: 200 LFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDA 259
Query: 277 WSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHA 336
WS GVLL++LL G PF ++ +T + + F +S AR+L+ LLN +
Sbjct: 260 WSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNV 319
Query: 337 DKRPTAGQLLQVAWFAEAS 355
D+R A + LQ W ++ S
Sbjct: 320 DERFDAMRALQHPWISQFS 338
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 127/261 (48%), Gaps = 20/261 (7%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRE----RQPQQITRAEYNLLSTLMHAH 157
Y+ ++ LG G F V+ A TGQ VALK I ++ Q E + L L H H
Sbjct: 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 74
Query: 158 IPTALALFENAPVPGTDTIVMQLVH-GESLIQHLCRQSTITESYICCIIRQLHSALHCLH 216
I + L++ + D I+M + + G L ++ ++ ++E +Q+ SA+ H
Sbjct: 75 I---IKLYD--VIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH 129
Query: 217 SQQIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDL-----EFASPEMLTSPATA 270
+I H+D++PEN+L++ + +K+ D G +A+PE+++ A
Sbjct: 130 RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYA 189
Query: 271 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 330
GP D+WS GV+LY++L PF DES +IS Y+ P +S A LI +
Sbjct: 190 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK----FLSPGAAGLIKR 245
Query: 331 LLNTHADKRPTAGQLLQVAWF 351
+L + R + +++Q WF
Sbjct: 246 MLIVNPLNRISIHEIMQDDWF 266
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 127/261 (48%), Gaps = 20/261 (7%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRE----RQPQQITRAEYNLLSTLMHAH 157
Y+ ++ LG G F V+ A TGQ VALK I ++ Q E + L L H H
Sbjct: 16 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 75
Query: 158 IPTALALFENAPVPGTDTIVMQLVH-GESLIQHLCRQSTITESYICCIIRQLHSALHCLH 216
I + L++ + D I+M + + G L ++ ++ ++E +Q+ SA+ H
Sbjct: 76 I---IKLYD--VIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH 130
Query: 217 SQQIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDL-----EFASPEMLTSPATA 270
+I H+D++PEN+L++ + +K+ D G +A+PE+++ A
Sbjct: 131 RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYA 190
Query: 271 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 330
GP D+WS GV+LY++L PF DES +IS Y+ P +S A LI +
Sbjct: 191 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK----FLSPGAAGLIKR 246
Query: 331 LLNTHADKRPTAGQLLQVAWF 351
+L + R + +++Q WF
Sbjct: 247 MLIVNPLNRISIHEIMQDDWF 267
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 127/261 (48%), Gaps = 20/261 (7%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRE----RQPQQITRAEYNLLSTLMHAH 157
Y+ ++ LG G F V+ A TGQ VALK I ++ Q E + L L H H
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 65
Query: 158 IPTALALFENAPVPGTDTIVMQLVH-GESLIQHLCRQSTITESYICCIIRQLHSALHCLH 216
I + L++ + D I+M + + G L ++ ++ ++E +Q+ SA+ H
Sbjct: 66 I---IKLYD--VIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH 120
Query: 217 SQQIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDL-----EFASPEMLTSPATA 270
+I H+D++PEN+L++ + +K+ D G +A+PE+++ A
Sbjct: 121 RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYA 180
Query: 271 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 330
GP D+WS GV+LY++L PF DES +IS Y+ P +S A LI +
Sbjct: 181 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK----FLSPGAAGLIKR 236
Query: 331 LLNTHADKRPTAGQLLQVAWF 351
+L + R + +++Q WF
Sbjct: 237 MLIVNPLNRISIHEIMQDDWF 257
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 102/215 (47%), Gaps = 12/215 (5%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALKQIPRER-QPQQITR--AEYNLLSTLMHAHIPTALAL 164
+G G F V+ AR TG+ VA+K I + + P + + E ++ L H P + L
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNH---PNIVKL 79
Query: 165 FENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQIAHKD 224
FE T +VM+ G + +L + E RQ+ SA+ H + I H+D
Sbjct: 80 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKYIVHRD 139
Query: 225 IRPENILMNGAV-LKLIDLGXXXXXXXXXLPDL-----EFASPEMLTSPATAGPSTDMWS 278
++ EN+L++G + +K+ D G D +A+PE+ GP D+WS
Sbjct: 140 LKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWS 199
Query: 279 LGVLLYILLSGVSPFLDESEEETRAHISVADYSFP 313
LGV+LY L+SG PF ++ +E R + Y P
Sbjct: 200 LGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIP 234
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 127/261 (48%), Gaps = 20/261 (7%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRE----RQPQQITRAEYNLLSTLMHAH 157
Y+ ++ LG G F V+ A TGQ VALK I ++ Q E + L L H H
Sbjct: 10 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPH 69
Query: 158 IPTALALFENAPVPGTDTIVMQLVH-GESLIQHLCRQSTITESYICCIIRQLHSALHCLH 216
I + L++ + D I+M + + G L ++ ++ ++E +Q+ SA+ H
Sbjct: 70 I---IKLYD--VIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH 124
Query: 217 SQQIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDL-----EFASPEMLTSPATA 270
+I H+D++PEN+L++ + +K+ D G +A+PE+++ A
Sbjct: 125 RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYA 184
Query: 271 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 330
GP D+WS GV+LY++L PF DES +IS Y+ P +S A LI +
Sbjct: 185 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK----FLSPGAAGLIKR 240
Query: 331 LLNTHADKRPTAGQLLQVAWF 351
+L + R + +++Q WF
Sbjct: 241 MLIVNPLNRISIHEIMQDDWF 261
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 123/260 (47%), Gaps = 19/260 (7%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQITRAEYNLLSTLMHAHIPTAL 162
LG G+F V AR++ + ++ALK Q+ + Q+ R E + S L H +I
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR-EVEIQSHLRHPNILRLY 100
Query: 163 ALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQIAH 222
F +A ++++ ++ + L + S E I +L +AL HS+++ H
Sbjct: 101 GYFHDA---TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 157
Query: 223 KDIRPENILMNGA-VLKLIDLGXXXXXXXXXLPDL----EFASPEMLTSPATAGPSTDMW 277
+DI+PEN+L+ A LK+ D G DL ++ PEM+ D+W
Sbjct: 158 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEG-RMHDEKVDLW 216
Query: 278 SLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHAD 337
SLGVL Y L G PF + +ET IS +++FP ++ AR+LI +LL +
Sbjct: 217 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLISRLLKHNPS 272
Query: 338 KRPTAGQLLQVAWFAEASCS 357
+RP ++L+ W S
Sbjct: 273 QRPMLREVLEHPWITANSSK 292
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 130/275 (47%), Gaps = 25/275 (9%)
Query: 92 RWQQEQFEHRYEELER-LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQITRA 145
+W E FE + R LG G+F V AR++ + ++ALK Q+ + Q+ R
Sbjct: 4 QWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR- 57
Query: 146 EYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCII 205
E + S L H +I F +A ++++ ++ + L + S E I
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDAT---RVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 114
Query: 206 RQLHSALHCLHSQQIAHKDIRPENILMNGA-VLKLIDLGXXXXXXXXXLPDL----EFAS 260
+L +AL HS+++ H+DI+PEN+L+ A LK+ D G DL ++
Sbjct: 115 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLP 174
Query: 261 PEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHI 320
PEM+ D+WSLGVL Y L G PF + +ET IS +++FP +
Sbjct: 175 PEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFV 229
Query: 321 SVPARELIGQLLNTHADKRPTAGQLLQVAWFAEAS 355
+ AR+LI +LL + +RP ++L+ W S
Sbjct: 230 TEGARDLISRLLKHNPSQRPMLREVLEHPWITANS 264
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 129/261 (49%), Gaps = 22/261 (8%)
Query: 99 EHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHI 158
+ +Y E++G G TV A D TGQ VA++Q+ ++QP++ N + +
Sbjct: 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK--ELIINEILVMRENKN 76
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + ++ V +VM+ + G SL + ++ + E I + R+ AL LHS
Sbjct: 77 PNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSN 135
Query: 219 QIAHKDIRPENIL--MNGAVLKLIDLGXXXXXXXXXLPDLEFA------SPEMLTSPATA 270
Q+ H+DI+ +NIL M+G+V KL D G E +PE++T A
Sbjct: 136 QVIHRDIKSDNILLGMDGSV-KLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAY- 193
Query: 271 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFP----PEQCGHISVPARE 326
GP D+WSLG++ ++ G P+L+E+ RA +A P PE+ +S R+
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNEN--PLRALYLIATNGTPELQNPEK---LSAIFRD 248
Query: 327 LIGQLLNTHADKRPTAGQLLQ 347
+ + L+ +KR +A +LLQ
Sbjct: 249 FLNRCLDMDVEKRGSAKELLQ 269
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 115/259 (44%), Gaps = 18/259 (6%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER----QPQQITRAEYNLLSTLMHAH 157
Y L+ +G G F V+ AR TG+ VA+K I + + Q++ R E + L H
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIXKVLNH-- 72
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHS 217
P + LFE T +V + G + +L E RQ+ SA+ H
Sbjct: 73 -PNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQ 131
Query: 218 QQIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDL-----EFASPEMLTSPATAG 271
+ I H+D++ EN+L++ +K+ D G D +A+PE+ G
Sbjct: 132 KFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDG 191
Query: 272 PSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQL 331
P D+WSLGV+LY L+SG PF ++ +E R + Y P + S L+ +
Sbjct: 192 PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF----YXSTDCENLLKKF 247
Query: 332 LNTHADKRPTAGQLLQVAW 350
L + KR T Q+ + W
Sbjct: 248 LILNPSKRGTLEQIXKDRW 266
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 130/275 (47%), Gaps = 25/275 (9%)
Query: 92 RWQQEQFEHRYEELER-LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQITRA 145
+W E FE + R LG G+F V AR++ + ++ALK Q+ + Q+ R
Sbjct: 5 QWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR- 58
Query: 146 EYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCII 205
E + S L H +I F +A ++++ ++ + L + S E I
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHDAT---RVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 115
Query: 206 RQLHSALHCLHSQQIAHKDIRPENILMNGA-VLKLIDLGXXXXXXXXXLPDL----EFAS 260
+L +AL HS+++ H+DI+PEN+L+ A LK+ D G DL ++
Sbjct: 116 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLP 175
Query: 261 PEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHI 320
PEM+ D+WSLGVL Y L G PF + +ET IS +++FP +
Sbjct: 176 PEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFV 230
Query: 321 SVPARELIGQLLNTHADKRPTAGQLLQVAWFAEAS 355
+ AR+LI +LL + +RP ++L+ W S
Sbjct: 231 TEGARDLISRLLKHNPSQRPMLREVLEHPWITANS 265
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 130/275 (47%), Gaps = 25/275 (9%)
Query: 92 RWQQEQFEHRYEELER-LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQITRA 145
+W E FE + R LG G+F V AR++ + ++ALK Q+ + Q+ R
Sbjct: 9 QWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR- 62
Query: 146 EYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCII 205
E + S L H +I F +A ++++ ++ + L + S E I
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDAT---RVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 119
Query: 206 RQLHSALHCLHSQQIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDL----EFAS 260
+L +AL HS+++ H+DI+PEN+L+ A LK+ D G DL ++
Sbjct: 120 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLP 179
Query: 261 PEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHI 320
PEM+ D+WSLGVL Y L G PF + +ET IS +++FP +
Sbjct: 180 PEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFV 234
Query: 321 SVPARELIGQLLNTHADKRPTAGQLLQVAWFAEAS 355
+ AR+LI +LL + +RP ++L+ W S
Sbjct: 235 TEGARDLISRLLKHNPSQRPMLREVLEHPWITANS 269
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 130/277 (46%), Gaps = 25/277 (9%)
Query: 92 RWQQEQFEHRYEELER-LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQITRA 145
+W E FE + R LG G+F V AR++ + ++ALK Q+ + Q+ R
Sbjct: 7 QWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR- 60
Query: 146 EYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCII 205
E + S L H +I F +A ++++ ++ + L + S E I
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDAT---RVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 117
Query: 206 RQLHSALHCLHSQQIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDL----EFAS 260
+L +AL HS+++ H+DI+PEN+L+ A LK+ D G DL ++
Sbjct: 118 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLP 177
Query: 261 PEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHI 320
PEM+ D+WSLGVL Y L G PF + +ET IS +++FP +
Sbjct: 178 PEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFV 232
Query: 321 SVPARELIGQLLNTHADKRPTAGQLLQVAWFAEASCS 357
+ AR+LI +LL + +RP ++L+ W S
Sbjct: 233 TEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSK 269
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 130/275 (47%), Gaps = 25/275 (9%)
Query: 92 RWQQEQFEHRYEELER-LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQITRA 145
+W E FE + R LG G+F V AR++ + ++ALK Q+ + Q+ R
Sbjct: 4 QWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR- 57
Query: 146 EYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCII 205
E + S L H +I F +A ++++ ++ + L + S E I
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDAT---RVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 114
Query: 206 RQLHSALHCLHSQQIAHKDIRPENILMNGA-VLKLIDLGXXXXXXXXXLPDL----EFAS 260
+L +AL HS+++ H+DI+PEN+L+ A LK+ D G DL ++
Sbjct: 115 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLP 174
Query: 261 PEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHI 320
PEM+ D+WSLGVL Y L G PF + +ET IS +++FP +
Sbjct: 175 PEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFV 229
Query: 321 SVPARELIGQLLNTHADKRPTAGQLLQVAWFAEAS 355
+ AR+LI +LL + +RP ++L+ W S
Sbjct: 230 TEGARDLISRLLKHNPSQRPMLREVLEHPWITANS 264
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 130/261 (49%), Gaps = 22/261 (8%)
Query: 99 EHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHI 158
+ +Y E++G G TV A D TGQ VA++Q+ ++QP++ N + +
Sbjct: 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK--ELIINEILVMRENKN 76
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + ++ V +VM+ + G SL + ++ + E I + R+ AL LHS
Sbjct: 77 PNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSN 135
Query: 219 QIAHKDIRPENIL--MNGAVLKLIDLGX------XXXXXXXXLPDLEFASPEMLTSPATA 270
Q+ H+DI+ +NIL M+G+V KL D G + + +PE++T A
Sbjct: 136 QVIHRDIKSDNILLGMDGSV-KLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAY- 193
Query: 271 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFP----PEQCGHISVPARE 326
GP D+WSLG++ ++ G P+L+E+ RA +A P PE+ +S R+
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNEN--PLRALYLIATNGTPELQNPEK---LSAIFRD 248
Query: 327 LIGQLLNTHADKRPTAGQLLQ 347
+ + L+ +KR +A +LLQ
Sbjct: 249 FLNRCLDMDVEKRGSAKELLQ 269
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 125/261 (47%), Gaps = 21/261 (8%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQITRAEYNLLSTLMHAHIPTAL 162
LG G+F V AR+R + ++ALK Q+ + Q+ R E + S L H +I
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRR-EVEIQSHLRHPNILRLY 78
Query: 163 ALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQIAH 222
F +A ++++ ++ + L + S E I +L +AL HS+++ H
Sbjct: 79 GYFHDAT---RVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIH 135
Query: 223 KDIRPENILM--NGAVLKLIDLGXX----XXXXXXXLPDLEFASPEMLTSPATAGPSTDM 276
+DI+PEN+L+ NG LK+ D G L++ PEM+ D+
Sbjct: 136 RDIKPENLLLGSNGE-LKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDL 193
Query: 277 WSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHA 336
WSLGVL Y L G+ PF + +ET IS +++FP ++ AR+LI +LL +A
Sbjct: 194 WSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFP----DFVTEGARDLISRLLKHNA 249
Query: 337 DKRPTAGQLLQVAWFAEASCS 357
+R T ++L+ W S
Sbjct: 250 SQRLTLAEVLEHPWIKANSSK 270
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 135/296 (45%), Gaps = 48/296 (16%)
Query: 97 QFEHRYE-ELERLGNGRFCTVRKARDRGTGQLVALKQIPRE--RQPQQITRAEYNLLSTL 153
+FE Y+ E LG G + V+ A G+ A+K I ++ ++ R L
Sbjct: 9 KFEDMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQ 68
Query: 154 MHAHIPTALALFENAPVPGTDT---IVMQLVHGESLIQHLCRQSTITESYICCIIRQLHS 210
+ +I + FE+ DT +V + + G S++ H+ +Q E ++R + +
Sbjct: 69 GNKNILELIEFFED------DTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAA 122
Query: 211 ALHCLHSQQIAHKDIRPENILMNG----AVLKL--IDLGXXXXXXXXXLP---------- 254
AL LH++ IAH+D++PENIL + +K+ DLG P
Sbjct: 123 ALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPC 182
Query: 255 -DLEFASPEML---TSPAT-AGPSTDMWSLGVLLYILLSGVSPFL---------DESE-- 298
E+ +PE++ T AT D+WSLGV+LYI+LSG PF+ D E
Sbjct: 183 GSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVC 242
Query: 299 ----EETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW 350
+ I Y FP + HIS A++LI +LL A +R +A Q+LQ W
Sbjct: 243 RVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPW 298
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 125/261 (47%), Gaps = 21/261 (8%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQITRAEYNLLSTLMHAHIPTAL 162
LG G+F V AR+R + ++ALK Q+ + Q+ R E + S L H +I
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRR-EVEIQSHLRHPNILRLY 78
Query: 163 ALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQIAH 222
F +A ++++ ++ + L + S E I +L +AL HS+++ H
Sbjct: 79 GYFHDAT---RVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIH 135
Query: 223 KDIRPENILM--NGAVLKLIDLGXX----XXXXXXXLPDLEFASPEMLTSPATAGPSTDM 276
+DI+PEN+L+ NG LK+ D G L++ PEM+ D+
Sbjct: 136 RDIKPENLLLGSNGE-LKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEG-RMHDEKVDL 193
Query: 277 WSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHA 336
WSLGVL Y L G+ PF + +ET IS +++FP ++ AR+LI +LL +A
Sbjct: 194 WSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFP----DFVTEGARDLISRLLKHNA 249
Query: 337 DKRPTAGQLLQVAWFAEASCS 357
+R T ++L+ W S
Sbjct: 250 SQRLTLAEVLEHPWIKANSSK 270
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 121/265 (45%), Gaps = 25/265 (9%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALKQI---PRERQPQQITRAEYNLLSTLMHAHIPTALAL 164
LG G V + R TGQ ALK + P+ RQ +++ ++ HI L +
Sbjct: 18 LGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQ-----EVDHHWQAS-GGPHIVCILDV 71
Query: 165 FENAP-VPGTDTIVMQLVHGESLIQHLCRQS--TITESYICCIIRQLHSALHCLHSQQIA 221
+EN I+M+ + G L + + TE I+R + +A+ LHS IA
Sbjct: 72 YENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIA 131
Query: 222 HKDIRPENILMNG----AVLKLIDLGXXXXXXXXXLP----DLEFASPEMLTSPATAGPS 273
H+D++PEN+L AVLKL D G L + +PE+L P S
Sbjct: 132 HRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVL-GPEKYDKS 190
Query: 274 TDMWSLGVLLYILLSGVSPFLDESEEE----TRAHISVADYSFPPEQCGHISVPARELIG 329
DMWSLGV++YILL G PF + + + I + Y FP + +S A++LI
Sbjct: 191 CDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIR 250
Query: 330 QLLNTHADKRPTAGQLLQVAWFAEA 354
LL T +R T Q + W ++
Sbjct: 251 LLLKTDPTERLTITQFMNHPWINQS 275
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 130/261 (49%), Gaps = 22/261 (8%)
Query: 99 EHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHI 158
+ +Y E++G G TV A D TGQ VA++Q+ ++QP++ N + +
Sbjct: 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK--ELIINEILVMRENKN 76
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + ++ V +VM+ + G SL + ++ + E I + R+ AL LHS
Sbjct: 77 PNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSN 135
Query: 219 QIAHKDIRPENIL--MNGAVLKLIDLGX------XXXXXXXXLPDLEFASPEMLTSPATA 270
Q+ H+DI+ +NIL M+G+V KL D G + + +PE++T A
Sbjct: 136 QVIHRDIKSDNILLGMDGSV-KLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAY- 193
Query: 271 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFP----PEQCGHISVPARE 326
GP D+WSLG++ ++ G P+L+E+ RA +A P PE+ +S R+
Sbjct: 194 GPKVDIWSLGIMAIEMIEGEPPYLNEN--PLRALYLIATNGTPELQNPEK---LSAIFRD 248
Query: 327 LIGQLLNTHADKRPTAGQLLQ 347
+ + L +KR +A +LLQ
Sbjct: 249 FLNRCLEMDVEKRGSAKELLQ 269
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 130/275 (47%), Gaps = 25/275 (9%)
Query: 92 RWQQEQFEHRYEELER-LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQITRA 145
+W E FE + R LG G+F V AR++ + ++ALK Q+ + Q+ R
Sbjct: 4 QWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR- 57
Query: 146 EYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCII 205
E + S L H +I F +A ++++ ++ + L + S E I
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDAT---RVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 114
Query: 206 RQLHSALHCLHSQQIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDL----EFAS 260
+L +AL HS+++ H+DI+PEN+L+ A LK+ D G +L ++
Sbjct: 115 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELCGTLDYLP 174
Query: 261 PEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHI 320
PEM+ D+WSLGVL Y L G PF + +ET IS +++FP +
Sbjct: 175 PEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFV 229
Query: 321 SVPARELIGQLLNTHADKRPTAGQLLQVAWFAEAS 355
+ AR+LI +LL + +RP ++L+ W S
Sbjct: 230 TEGARDLISRLLKHNPSQRPMLREVLEHPWITANS 264
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 121/265 (45%), Gaps = 25/265 (9%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALKQI---PRERQPQQITRAEYNLLSTLMHAHIPTALAL 164
LG G V + R TGQ ALK + P+ RQ +++ ++ HI L +
Sbjct: 37 LGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQ-----EVDHHWQAS-GGPHIVCILDV 90
Query: 165 FENAP-VPGTDTIVMQLVHGESLIQHLCRQS--TITESYICCIIRQLHSALHCLHSQQIA 221
+EN I+M+ + G L + + TE I+R + +A+ LHS IA
Sbjct: 91 YENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIA 150
Query: 222 HKDIRPENILMNG----AVLKLIDLGXXXXXXXXXLP----DLEFASPEMLTSPATAGPS 273
H+D++PEN+L AVLKL D G L + +PE+L P S
Sbjct: 151 HRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVL-GPEKYDKS 209
Query: 274 TDMWSLGVLLYILLSGVSPFLDESEEE----TRAHISVADYSFPPEQCGHISVPARELIG 329
DMWSLGV++YILL G PF + + + I + Y FP + +S A++LI
Sbjct: 210 CDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIR 269
Query: 330 QLLNTHADKRPTAGQLLQVAWFAEA 354
LL T +R T Q + W ++
Sbjct: 270 LLLKTDPTERLTITQFMNHPWINQS 294
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 122/258 (47%), Gaps = 19/258 (7%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQITRAEYNLLSTLMHAHIPTAL 162
LG G+F V AR++ + ++ALK Q+ + Q+ R E + S L H +I
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR-EVEIQSHLRHPNILRLY 91
Query: 163 ALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQIAH 222
F +A ++++ ++ + L + S E I +L +AL HS+++ H
Sbjct: 92 GYFHDAT---RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 148
Query: 223 KDIRPENILMNGA-VLKLIDLGXX----XXXXXXXLPDLEFASPEMLTSPATAGPSTDMW 277
+DI+PEN+L+ A LK+ D G L++ PEM+ D+W
Sbjct: 149 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDLW 207
Query: 278 SLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHAD 337
SLGVL Y L G PF + +ET IS +++FP ++ AR+LI +LL +
Sbjct: 208 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLISRLLKHNPS 263
Query: 338 KRPTAGQLLQVAWFAEAS 355
+RP ++L+ W S
Sbjct: 264 QRPMLREVLEHPWITANS 281
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 122/260 (46%), Gaps = 19/260 (7%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQITRAEYNLLSTLMHAHIPTAL 162
LG G+F V AR++ + ++ALK Q+ + Q+ R E + S L H +I
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR-EVEIQSHLRHPNILRLY 100
Query: 163 ALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQIAH 222
F +A ++++ ++ + L + S E I +L +AL HS+++ H
Sbjct: 101 GYFHDA---TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 157
Query: 223 KDIRPENILMNGA-VLKLIDLG----XXXXXXXXXLPDLEFASPEMLTSPATAGPSTDMW 277
+DI+PEN+L+ A LK+ D G L++ PEM+ D+W
Sbjct: 158 RDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEG-RMHDEKVDLW 216
Query: 278 SLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHAD 337
SLGVL Y L G PF + +ET IS +++FP ++ AR+LI +LL +
Sbjct: 217 SLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLISRLLKHNPS 272
Query: 338 KRPTAGQLLQVAWFAEASCS 357
+RP ++L+ W S
Sbjct: 273 QRPMLREVLEHPWITANSSK 292
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 128/275 (46%), Gaps = 25/275 (9%)
Query: 92 RWQQEQFEHRYEELER-LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQITRA 145
+W E FE + R LG G+F V AR++ + ++ALK Q+ + Q+ R
Sbjct: 9 QWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR- 62
Query: 146 EYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCII 205
E + S L H +I F +A ++++ + + L + S E I
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDAT---RVYLILEYAPRGEVYKELQKLSKFDEQRTATYI 119
Query: 206 RQLHSALHCLHSQQIAHKDIRPENILMNGA-VLKLIDLGXX----XXXXXXXLPDLEFAS 260
+L +AL HS+++ H+DI+PEN+L+ A LK+ D G L++
Sbjct: 120 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLP 179
Query: 261 PEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHI 320
PEM+ D+WSLGVL Y L G PF + +ET IS +++FP +
Sbjct: 180 PEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFV 234
Query: 321 SVPARELIGQLLNTHADKRPTAGQLLQVAWFAEAS 355
+ AR+LI +LL + +RP ++L+ W S
Sbjct: 235 TEGARDLISRLLKHNPSQRPMLREVLEHPWITANS 269
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 130/277 (46%), Gaps = 25/277 (9%)
Query: 92 RWQQEQFEHRYEELER-LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQITRA 145
+W E FE + R LG G+F V AR++ + ++ALK Q+ + Q+ R
Sbjct: 9 QWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR- 62
Query: 146 EYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCII 205
E + S L H +I F +A ++++ + + L + S E I
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDAT---RVYLILEYAPRGEVYKELQKLSKFDEQRTATYI 119
Query: 206 RQLHSALHCLHSQQIAHKDIRPENILMNGA-VLKLIDLGXX----XXXXXXXLPDLEFAS 260
+L +AL HS+++ H+DI+PEN+L+ A LK+ D G L++
Sbjct: 120 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXGTLDYLP 179
Query: 261 PEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHI 320
PEM+ D+WSLGVL Y L G PF + +ET IS +++FP +
Sbjct: 180 PEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFV 234
Query: 321 SVPARELIGQLLNTHADKRPTAGQLLQVAWFAEASCS 357
+ AR+LI +LL + +RP ++L+ W S
Sbjct: 235 TEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSK 271
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 129/275 (46%), Gaps = 25/275 (9%)
Query: 92 RWQQEQFEHRYEELER-LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQITRA 145
+W E FE + R LG G+F V AR++ + ++ALK Q+ + Q+ R
Sbjct: 4 QWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR- 57
Query: 146 EYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCII 205
E + S L H +I F +A ++++ ++ + L + S E I
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDAT---RVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 114
Query: 206 RQLHSALHCLHSQQIAHKDIRPENILMNGAV-LKLIDLGXX----XXXXXXXLPDLEFAS 260
+L +AL HS+++ H+DI+PEN+L+ A LK+ D G L++
Sbjct: 115 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLP 174
Query: 261 PEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHI 320
PEM+ D+WSLGVL Y L G PF + +ET IS +++FP +
Sbjct: 175 PEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFV 229
Query: 321 SVPARELIGQLLNTHADKRPTAGQLLQVAWFAEAS 355
+ AR+LI +LL + +RP ++L+ W S
Sbjct: 230 TEGARDLISRLLKHNPSQRPMLREVLEHPWITANS 264
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 129/275 (46%), Gaps = 25/275 (9%)
Query: 92 RWQQEQFEHRYEELER-LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQITRA 145
+W E FE + R LG G+F V AR++ + ++ALK Q+ + Q+ R
Sbjct: 7 QWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR- 60
Query: 146 EYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCII 205
E + S L H +I F +A ++++ ++ + L + S E I
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDAT---RVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 117
Query: 206 RQLHSALHCLHSQQIAHKDIRPENILMNGA-VLKLIDLGXX----XXXXXXXLPDLEFAS 260
+L +AL HS+++ H+DI+PEN+L+ A LK+ D G L++
Sbjct: 118 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLP 177
Query: 261 PEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHI 320
PEM+ D+WSLGVL Y L G PF + +ET IS +++FP +
Sbjct: 178 PEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFV 232
Query: 321 SVPARELIGQLLNTHADKRPTAGQLLQVAWFAEAS 355
+ AR+LI +LL + +RP ++L+ W S
Sbjct: 233 TEGARDLISRLLKHNPSQRPMLREVLEHPWITANS 267
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 129/277 (46%), Gaps = 25/277 (9%)
Query: 92 RWQQEQFEHRYEELER-LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQITRA 145
+W E FE + R LG G+F V AR++ + ++ALK Q+ + Q+ R
Sbjct: 3 QWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR- 56
Query: 146 EYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCII 205
E + S L H +I F +A ++++ ++ + L + S E I
Sbjct: 57 EVEIQSHLRHPNILRLYGYFHDAT---RVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 113
Query: 206 RQLHSALHCLHSQQIAHKDIRPENILMNGAV-LKLIDLGXX----XXXXXXXLPDLEFAS 260
+L +AL HS+++ H+DI+PEN+L+ A LK+ D G L++
Sbjct: 114 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLP 173
Query: 261 PEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHI 320
PEM+ D+WSLGVL Y L G PF + +ET IS +++FP +
Sbjct: 174 PEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFV 228
Query: 321 SVPARELIGQLLNTHADKRPTAGQLLQVAWFAEASCS 357
+ AR+LI +LL + +RP ++L+ W S
Sbjct: 229 TEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSK 265
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 130/279 (46%), Gaps = 25/279 (8%)
Query: 90 ETRWQQEQFEHRYEELER-LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQIT 143
+ +W E FE + R LG G+F V AR++ + ++ALK Q+ + Q+
Sbjct: 2 KRQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 144 RAEYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICC 203
R E + S L H +I F +A ++++ ++ + L + S E
Sbjct: 57 R-EVEIQSHLRHPNILRLYGYFHDAT---RVYLILEYAPLGTVYRELQKLSKFDEQRTAT 112
Query: 204 IIRQLHSALHCLHSQQIAHKDIRPENILMNGAV-LKLIDLGXX----XXXXXXXLPDLEF 258
I +L +AL HS+++ H+DI+PEN+L+ A LK+ D G L++
Sbjct: 113 YITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDY 172
Query: 259 ASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCG 318
PEM+ D+WSLGVL Y L G PF + +ET IS +++FP
Sbjct: 173 LPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----D 227
Query: 319 HISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEASCS 357
++ AR+LI +LL + +RP ++L+ W S
Sbjct: 228 FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSK 266
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 129/275 (46%), Gaps = 25/275 (9%)
Query: 92 RWQQEQFEHRYEELER-LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQITRA 145
+W E FE + R LG G+F V AR++ + ++ALK Q+ + Q+ R
Sbjct: 9 QWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR- 62
Query: 146 EYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCII 205
E + S L H +I F +A ++++ ++ + L + S E I
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDAT---RVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 119
Query: 206 RQLHSALHCLHSQQIAHKDIRPENILMNGAV-LKLIDLGXX----XXXXXXXLPDLEFAS 260
+L +AL HS+++ H+DI+PEN+L+ A LK+ D G L++
Sbjct: 120 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLP 179
Query: 261 PEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHI 320
PEM+ D+WSLGVL Y L G PF + +ET IS +++FP +
Sbjct: 180 PEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFV 234
Query: 321 SVPARELIGQLLNTHADKRPTAGQLLQVAWFAEAS 355
+ AR+LI +LL + +RP ++L+ W S
Sbjct: 235 TEGARDLISRLLKHNPSQRPMLREVLEHPWITANS 269
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 129/277 (46%), Gaps = 25/277 (9%)
Query: 92 RWQQEQFEHRYEELER-LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQITRA 145
+W E FE + R LG G+F V AR++ + ++ALK Q+ + Q+ R
Sbjct: 7 QWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR- 60
Query: 146 EYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCII 205
E + S L H +I F +A ++++ ++ + L + S E I
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDAT---RVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 117
Query: 206 RQLHSALHCLHSQQIAHKDIRPENILMNGA-VLKLIDLGXX----XXXXXXXLPDLEFAS 260
+L +AL HS+++ H+DI+PEN+L+ A LK+ D G L++
Sbjct: 118 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLP 177
Query: 261 PEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHI 320
PEM+ D+WSLGVL Y L G PF + +ET IS +++FP +
Sbjct: 178 PEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFV 232
Query: 321 SVPARELIGQLLNTHADKRPTAGQLLQVAWFAEASCS 357
+ AR+LI +LL + +RP ++L+ W S
Sbjct: 233 TEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSK 269
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 129/275 (46%), Gaps = 25/275 (9%)
Query: 92 RWQQEQFEHRYEELER-LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQITRA 145
+W E FE + R LG G+F V AR++ + ++ALK Q+ + Q+ R
Sbjct: 5 QWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR- 58
Query: 146 EYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCII 205
E + S L H +I F +A ++++ ++ + L + S E I
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHDAT---RVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 115
Query: 206 RQLHSALHCLHSQQIAHKDIRPENILMNGA-VLKLIDLGXX----XXXXXXXLPDLEFAS 260
+L +AL HS+++ H+DI+PEN+L+ A LK+ D G L++
Sbjct: 116 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCGTLDYLP 175
Query: 261 PEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHI 320
PEM+ D+WSLGVL Y L G PF + +ET IS +++FP +
Sbjct: 176 PEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFV 230
Query: 321 SVPARELIGQLLNTHADKRPTAGQLLQVAWFAEAS 355
+ AR+LI +LL + +RP ++L+ W S
Sbjct: 231 TEGARDLISRLLKHNPSQRPMLREVLEHPWITANS 265
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 119/280 (42%), Gaps = 22/280 (7%)
Query: 91 TRWQQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPR-----------ERQP 139
R ++ + Y ++ +LG+G + V +++ A+K I + +
Sbjct: 27 VRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNI 86
Query: 140 QQITRAEYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITES 199
++ YN +S L P + LF+ +V + G L + + + E
Sbjct: 87 EKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDEC 146
Query: 200 YICCIIRQLHSALHCLHSQQIAHKDIRPENILMNGAV----LKLIDLG-----XXXXXXX 250
I++Q+ S + LH I H+DI+PENIL+ +K++D G
Sbjct: 147 DAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLR 206
Query: 251 XXLPDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADY 310
L + +PE+L D+WS GV++YILL G PF +++++ + Y
Sbjct: 207 DRLGTAYYIAPEVLKKKYN--EKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKY 264
Query: 311 SFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW 350
F +IS A+ELI +L +KR TA + L W
Sbjct: 265 YFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRW 304
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 130/261 (49%), Gaps = 22/261 (8%)
Query: 99 EHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHI 158
+ +Y E++G G TV A D TGQ VA++Q+ ++QP++ N + +
Sbjct: 20 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK--ELIINEILVMRENKN 77
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + ++ V +VM+ + G SL + ++ + E I + R+ AL LHS
Sbjct: 78 PNIVNYLDSYLVGDELWVVMEYLAGGSLTD-VVTETCMDEGQIAAVCRECLQALEFLHSN 136
Query: 219 QIAHKDIRPENIL--MNGAVLKLIDLGX------XXXXXXXXLPDLEFASPEMLTSPATA 270
Q+ H+DI+ +NIL M+G+V KL D G + + +PE++T A
Sbjct: 137 QVIHRDIKSDNILLGMDGSV-KLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAY- 194
Query: 271 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFP----PEQCGHISVPARE 326
GP D+WSLG++ ++ G P+L+E+ RA +A P PE+ +S R+
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEPPYLNEN--PLRALYLIATNGTPELQNPEK---LSAIFRD 249
Query: 327 LIGQLLNTHADKRPTAGQLLQ 347
+ + L +KR +A +L+Q
Sbjct: 250 FLNRCLEMDVEKRGSAKELIQ 270
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 131/275 (47%), Gaps = 25/275 (9%)
Query: 92 RWQQEQFEHRYEELER-LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQITRA 145
+W E FE + R LG G+F V AR++ + ++ALK Q+ + Q+ R
Sbjct: 6 QWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR- 59
Query: 146 EYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCII 205
E + S L H +I F +A ++++ ++ + L + S E I
Sbjct: 60 EVEIQSHLRHPNILRLYGYFHDAT---RVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 116
Query: 206 RQLHSALHCLHSQQIAHKDIRPENILMNGA-VLKLIDLGXX----XXXXXXXLPDLEFAS 260
+L +AL HS+++ H+DI+PEN+L+ A LK+ D G L++
Sbjct: 117 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLP 176
Query: 261 PEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHI 320
PEM+ D+WSLGVL Y L G PF + +ET IS +++FP +
Sbjct: 177 PEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFV 231
Query: 321 SVPARELIGQLLNTHADKRPTAGQLLQVAWFAEAS 355
+ AR+LI +LL + +RP ++L+ W S
Sbjct: 232 TEGARDLISRLLKHNPSQRPMLREVLEHPWITANS 266
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 129/275 (46%), Gaps = 25/275 (9%)
Query: 92 RWQQEQFEHRYEELER-LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQITRA 145
+W E FE + R LG G+F V AR++ + ++ALK Q+ + Q+ R
Sbjct: 7 QWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR- 60
Query: 146 EYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCII 205
E + S L H +I F +A ++++ ++ + L + S E I
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDAT---RVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 117
Query: 206 RQLHSALHCLHSQQIAHKDIRPENILMNGAV-LKLIDLGXX----XXXXXXXLPDLEFAS 260
+L +AL HS+++ H+DI+PEN+L+ A LK+ D G L++
Sbjct: 118 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLP 177
Query: 261 PEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHI 320
PEM+ D+WSLGVL Y L G PF + +ET IS +++FP +
Sbjct: 178 PEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFV 232
Query: 321 SVPARELIGQLLNTHADKRPTAGQLLQVAWFAEAS 355
+ AR+LI +LL + +RP ++L+ W S
Sbjct: 233 TEGARDLISRLLKHNPSQRPMLREVLEHPWITANS 267
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 129/277 (46%), Gaps = 25/277 (9%)
Query: 92 RWQQEQFEHRYEELER-LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQITRA 145
+W E FE + R LG G+F V AR++ + ++ALK Q+ + Q+ R
Sbjct: 8 QWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR- 61
Query: 146 EYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCII 205
E + S L H +I F +A ++++ ++ + L + S E I
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDAT---RVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 118
Query: 206 RQLHSALHCLHSQQIAHKDIRPENILMNGAV-LKLIDLGXX----XXXXXXXLPDLEFAS 260
+L +AL HS+++ H+DI+PEN+L+ A LK+ D G L++
Sbjct: 119 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLP 178
Query: 261 PEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHI 320
PEM+ D+WSLGVL Y L G PF + +ET IS +++FP +
Sbjct: 179 PEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFV 233
Query: 321 SVPARELIGQLLNTHADKRPTAGQLLQVAWFAEASCS 357
+ AR+LI +LL + +RP ++L+ W S
Sbjct: 234 TEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSK 270
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 131/279 (46%), Gaps = 25/279 (8%)
Query: 90 ETRWQQEQFEHRYEELER-LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQIT 143
+ +W E FE + R LG G+F V AR++ + ++ALK Q+ + Q+
Sbjct: 2 KRQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 144 RAEYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICC 203
R E + S L H +I F +A ++++ ++ + L + S E
Sbjct: 57 R-EVEIQSHLRHPNILRLYGYFHDAT---RVYLILEYAPLGTVYRELQKLSKFDEQRTAT 112
Query: 204 IIRQLHSALHCLHSQQIAHKDIRPENILMNGAV-LKLIDLGXX----XXXXXXXLPDLEF 258
I +L +AL HS+++ H+DI+PEN+L+ A LK+ D G L++
Sbjct: 113 YITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGTLDY 172
Query: 259 ASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCG 318
PEM+ D+WSLGVL Y L G PF + +ET IS +++FP
Sbjct: 173 LPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----D 227
Query: 319 HISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEASCS 357
++ AR+LI +LL + +RP ++L+ W S
Sbjct: 228 FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSK 266
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 129/277 (46%), Gaps = 25/277 (9%)
Query: 92 RWQQEQFEHRYEELER-LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQITRA 145
+W E FE + R LG G+F V AR++ + ++ALK Q+ + Q+ R
Sbjct: 5 QWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR- 58
Query: 146 EYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCII 205
E + S L H +I F +A ++++ ++ + L + S E I
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHDAT---RVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 115
Query: 206 RQLHSALHCLHSQQIAHKDIRPENILMNGAV-LKLIDLGXX----XXXXXXXLPDLEFAS 260
+L +AL HS+++ H+DI+PEN+L+ A LK+ D G L++
Sbjct: 116 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGTLDYLP 175
Query: 261 PEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHI 320
PEM+ D+WSLGVL Y L G PF + +ET IS +++FP +
Sbjct: 176 PEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFV 230
Query: 321 SVPARELIGQLLNTHADKRPTAGQLLQVAWFAEASCS 357
+ AR+LI +LL + +RP ++L+ W S
Sbjct: 231 TEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSK 267
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 132/279 (47%), Gaps = 25/279 (8%)
Query: 90 ETRWQQEQFEHRYEELER-LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQIT 143
+ +W E FE + R LG G+F V AR++ + ++ALK Q+ + Q+
Sbjct: 5 KRQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR 59
Query: 144 RAEYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICC 203
R E + S L H +I F +A ++++ ++ + L + S E
Sbjct: 60 R-EVEIQSHLRHPNILRLYGYFHDAT---RVYLILEYAPLGTVYRELQKLSKFDEQRTAT 115
Query: 204 IIRQLHSALHCLHSQQIAHKDIRPENILMNGA-VLKLIDLGXX----XXXXXXXLPDLEF 258
I +L +AL HS+++ H+DI+PEN+L+ A LK+ D G L++
Sbjct: 116 YITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDY 175
Query: 259 ASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCG 318
PEM+ D+WSLGVL Y L G PF + +ET IS +++FP
Sbjct: 176 LPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----D 230
Query: 319 HISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEASCS 357
++ AR+LI +LL + +RP ++L+ W S
Sbjct: 231 FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSK 269
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 132/279 (47%), Gaps = 25/279 (8%)
Query: 90 ETRWQQEQFEHRYEELER-LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQIT 143
+ +W E FE + R LG G+F V AR++ + ++ALK Q+ + Q+
Sbjct: 2 KRQWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 144 RAEYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICC 203
R E + S L H +I F +A ++++ ++ + L + S E
Sbjct: 57 R-EVEIQSHLRHPNILRLYGYFHDAT---RVYLILEYAPLGTVYRELQKLSKFDEQRTAT 112
Query: 204 IIRQLHSALHCLHSQQIAHKDIRPENILMNGAV-LKLIDLGXX----XXXXXXXLPDLEF 258
I +L +AL HS+++ H+DI+PEN+L+ A LK+ D G L++
Sbjct: 113 YITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDY 172
Query: 259 ASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCG 318
PEM+ D+WSLGVL Y L G PF + +ET IS +++FP
Sbjct: 173 LPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----D 227
Query: 319 HISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEASCS 357
++ AR+LI +LL + +RP ++L+ W S
Sbjct: 228 FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSK 266
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 118/264 (44%), Gaps = 29/264 (10%)
Query: 106 ERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQ-----QITRAEYNLLSTLMHAHIPT 160
+ LG G F V+ + TG VA+K + R++ +I R NL H HI
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNL-KLFRHPHI-- 73
Query: 161 ALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQI 220
+ L++ P +VM+ V G L ++C+ + E + +Q+ SA+ H +
Sbjct: 74 -IKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMV 132
Query: 221 AHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDLEF----------ASPEMLTSPAT 269
H+D++PEN+L++ + K+ D G + D EF A+PE+++
Sbjct: 133 VHRDLKPENVLLDAHMNAKIADFG-----LSNMMSDGEFLRDSCGSPNYAAPEVISGRLY 187
Query: 270 AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIG 329
AGP D+WS GV+LY LL G PF DE I + P +++ L+
Sbjct: 188 AGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPE----YLNRSVATLLM 243
Query: 330 QLLNTHADKRPTAGQLLQVAWFAE 353
+L KR T + + WF +
Sbjct: 244 HMLQVDPLKRATIKDIREHEWFKQ 267
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 114/263 (43%), Gaps = 17/263 (6%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPT 160
RY+ ++ +G+G F R RD+ T +LVA+K I R + + E +L H P
Sbjct: 21 RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRH---PN 77
Query: 161 ALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQI 220
+ E P I+M+ G L + +C +E +QL S + HS QI
Sbjct: 78 IVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQI 137
Query: 221 AHKDIRPENILMNGA---VLKLIDLGXXXXXXXXXLPDL-----EFASPEMLTSPATAGP 272
H+D++ EN L++G+ LK+ D G P + +PE+L G
Sbjct: 138 CHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGK 197
Query: 273 STDMWSLGVLLYILLSGVSPFLDESE----EETRAHISVADYSFPPEQCGHISVPARELI 328
D+WS GV LY++L G PF D E +T I YS P + IS LI
Sbjct: 198 IADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDI--RISPECCHLI 255
Query: 329 GQLLNTHADKRPTAGQLLQVAWF 351
++ R + ++ +WF
Sbjct: 256 SRIFVADPATRISIPEIKTHSWF 278
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 128/275 (46%), Gaps = 25/275 (9%)
Query: 92 RWQQEQFEHRYEELER-LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQITRA 145
+W E FE + R LG G+F V AR++ ++ALK Q+ + Q+ R
Sbjct: 1 QWALEDFE-----IGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRR- 54
Query: 146 EYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCII 205
E + S L H +I F +A ++++ ++ + L + S E I
Sbjct: 55 EVEIQSHLRHPNILRLYGYFHDAT---RVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 111
Query: 206 RQLHSALHCLHSQQIAHKDIRPENILMNGAV-LKLIDLGXX----XXXXXXXLPDLEFAS 260
+L +AL HS+++ H+DI+PEN+L+ A LK+ D G L++
Sbjct: 112 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLP 171
Query: 261 PEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHI 320
PEM+ D+WSLGVL Y L G PF + +ET IS +++FP +
Sbjct: 172 PEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFV 226
Query: 321 SVPARELIGQLLNTHADKRPTAGQLLQVAWFAEAS 355
+ AR+LI +LL + +RP ++L+ W S
Sbjct: 227 TEGARDLISRLLKHNPSQRPMLREVLEHPWITANS 261
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 118/264 (44%), Gaps = 29/264 (10%)
Query: 106 ERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQ-----QITRAEYNLLSTLMHAHIPT 160
+ LG G F V+ + TG VA+K + R++ +I R NL H HI
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNL-KLFRHPHI-- 73
Query: 161 ALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQI 220
+ L++ P +VM+ V G L ++C+ + E + +Q+ SA+ H +
Sbjct: 74 -IKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMV 132
Query: 221 AHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDLEF----------ASPEMLTSPAT 269
H+D++PEN+L++ + K+ D G + D EF A+PE+++
Sbjct: 133 VHRDLKPENVLLDAHMNAKIADFG-----LSNMMSDGEFLRTSCGSPNYAAPEVISGRLY 187
Query: 270 AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIG 329
AGP D+WS GV+LY LL G PF DE I + P +++ L+
Sbjct: 188 AGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPE----YLNRSVATLLM 243
Query: 330 QLLNTHADKRPTAGQLLQVAWFAE 353
+L KR T + + WF +
Sbjct: 244 HMLQVDPLKRATIKDIREHEWFKQ 267
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 130/279 (46%), Gaps = 25/279 (8%)
Query: 90 ETRWQQEQFEHRYEELER-LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQIT 143
+ +W E FE + R LG G+F V AR++ + ++ALK Q+ + Q+
Sbjct: 2 KRQWALEDFE-----IGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLR 56
Query: 144 RAEYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICC 203
R E + S L H +I F ++ ++++ ++ + L + S E
Sbjct: 57 R-EVEIQSHLRHPNILRLYGYFHDST---RVYLILEYAPLGTVYRELQKLSKFDEQRTAT 112
Query: 204 IIRQLHSALHCLHSQQIAHKDIRPENILMNGAV-LKLIDLGXX----XXXXXXXLPDLEF 258
I +L +AL HS+++ H+DI+PEN+L+ A LK+ D G L++
Sbjct: 113 YITELANALSYCHSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDY 172
Query: 259 ASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCG 318
PEM+ D+WSLGVL Y L G PF + ++T IS +++FP
Sbjct: 173 LPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFP----D 227
Query: 319 HISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEASCS 357
++ AR+LI +LL + +RP ++L+ W S
Sbjct: 228 FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSK 266
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 129/275 (46%), Gaps = 25/275 (9%)
Query: 92 RWQQEQFEHRYEELER-LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQITRA 145
+W E FE + R LG G+F V AR++ + ++ALK Q+ + Q+ R
Sbjct: 6 QWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR- 59
Query: 146 EYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCII 205
E + S L H +I F +A ++++ ++ + L + S E I
Sbjct: 60 EVEIQSHLRHPNILRLYGYFHDAT---RVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 116
Query: 206 RQLHSALHCLHSQQIAHKDIRPENILMNGA-VLKLIDLGXX----XXXXXXXLPDLEFAS 260
+L +AL HS+++ H+DI+PEN+L+ A LK+ + G L++
Sbjct: 117 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLP 176
Query: 261 PEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHI 320
PEM+ D+WSLGVL Y L G PF + +ET IS +++FP +
Sbjct: 177 PEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFV 231
Query: 321 SVPARELIGQLLNTHADKRPTAGQLLQVAWFAEAS 355
+ AR+LI +LL + +RP ++L+ W S
Sbjct: 232 TEGARDLISRLLKHNPSQRPMLREVLEHPWITANS 266
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 129/277 (46%), Gaps = 25/277 (9%)
Query: 92 RWQQEQFEHRYEELER-LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQITRA 145
+W E FE + R LG G+F V AR++ + ++ALK Q+ + Q+ R
Sbjct: 7 QWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR- 60
Query: 146 EYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCII 205
E + S L H +I F +A ++++ ++ + L + S E I
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDAT---RVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 117
Query: 206 RQLHSALHCLHSQQIAHKDIRPENILMNGAV-LKLIDLGXX----XXXXXXXLPDLEFAS 260
+L +AL HS+++ H+DI+PEN+L+ A LK+ + G L++
Sbjct: 118 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLP 177
Query: 261 PEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHI 320
PEM+ D+WSLGVL Y L G PF + +ET IS +++FP +
Sbjct: 178 PEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFV 232
Query: 321 SVPARELIGQLLNTHADKRPTAGQLLQVAWFAEASCS 357
+ AR+LI +LL + +RP ++L+ W S
Sbjct: 233 TEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSK 269
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 129/261 (49%), Gaps = 22/261 (8%)
Query: 99 EHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHI 158
+ +Y E++G G TV A D TGQ VA++Q+ ++QP++ N + +
Sbjct: 20 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK--ELIINEILVMRENKN 77
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + ++ V +VM+ + G SL + ++ + E I + R+ AL LHS
Sbjct: 78 PNIVNYLDSYLVGDELWVVMEYLAGGSL-TDVVTETCMDEGQIAAVCRECLQALEFLHSN 136
Query: 219 QIAHKDIRPENIL--MNGAVLKLIDLGX------XXXXXXXXLPDLEFASPEMLTSPATA 270
Q+ H++I+ +NIL M+G+V KL D G + + +PE++T A
Sbjct: 137 QVIHRNIKSDNILLGMDGSV-KLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAY- 194
Query: 271 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFP----PEQCGHISVPARE 326
GP D+WSLG++ ++ G P+L+E+ RA +A P PE+ +S R+
Sbjct: 195 GPKVDIWSLGIMAIEMIEGEPPYLNEN--PLRALYLIATNGTPELQNPEK---LSAIFRD 249
Query: 327 LIGQLLNTHADKRPTAGQLLQ 347
+ + L +KR +A +L+Q
Sbjct: 250 FLNRCLEMDVEKRGSAKELIQ 270
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 118/267 (44%), Gaps = 25/267 (9%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALKQI---------PRERQPQQITRAEYNLLSTLMHAHI 158
LG+G V+ A +R T + VA++ I RE P E +L L H I
Sbjct: 143 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 202
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
F+ IV++L+ G L + + E+ Q+ A+ LH
Sbjct: 203 IKIKNFFDAEDY----YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN 258
Query: 219 QIAHKDIRPENILMNG----AVLKLIDLGXXXXXXXXXLPDL-----EFASPEMLTSPAT 269
I H+D++PEN+L++ ++K+ D G L + +PE+L S T
Sbjct: 259 GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGT 318
Query: 270 AG--PSTDMWSLGVLLYILLSGVSPFLD-ESEEETRAHISVADYSFPPEQCGHISVPARE 326
AG + D WSLGV+L+I LSG PF + ++ + I+ Y+F PE +S A +
Sbjct: 319 AGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALD 378
Query: 327 LIGQLLNTHADKRPTAGQLLQVAWFAE 353
L+ +LL R T + L+ W +
Sbjct: 379 LVKKLLVVDPKARFTTEEALRHPWLQD 405
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 118/267 (44%), Gaps = 25/267 (9%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALKQI---------PRERQPQQITRAEYNLLSTLMHAHI 158
LG+G V+ A +R T + VA+K I RE P E +L L H I
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
F+ IV++L+ G L + + E+ Q+ A+ LH
Sbjct: 78 IKIKNFFDAEDY----YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN 133
Query: 219 QIAHKDIRPENILMNG----AVLKLIDLGXXXXXXXXXLPDL-----EFASPEMLTSPAT 269
I H+D++PEN+L++ ++K+ D G L + +PE+L S T
Sbjct: 134 GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGT 193
Query: 270 AG--PSTDMWSLGVLLYILLSGVSPFLD-ESEEETRAHISVADYSFPPEQCGHISVPARE 326
AG + D WSLGV+L+I LSG PF + ++ + I+ Y+F PE +S A +
Sbjct: 194 AGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALD 253
Query: 327 LIGQLLNTHADKRPTAGQLLQVAWFAE 353
L+ +LL R T + L+ W +
Sbjct: 254 LVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 114/261 (43%), Gaps = 27/261 (10%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALKQIPRER----QPQQITRAEYNLLSTLMHAHIPTALA 163
LG G F V+ + TG VA+K + R++ R E L H HI +
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHI---IK 80
Query: 164 LFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQIAHK 223
L++ P +VM+ V G L ++C+ + E + +Q+ S + H + H+
Sbjct: 81 LYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHR 140
Query: 224 DIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDLEF----------ASPEMLTSPATAGP 272
D++PEN+L++ + K+ D G + D EF A+PE+++ AGP
Sbjct: 141 DLKPENVLLDAHMNAKIADFG-----LSNMMSDGEFLRXSCGSPNYAAPEVISGRLYAGP 195
Query: 273 STDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLL 332
D+WS GV+LY LL G PF D+ I + P +++ L+ +L
Sbjct: 196 EVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQ----YLNPSVISLLKHML 251
Query: 333 NTHADKRPTAGQLLQVAWFAE 353
KR T + + WF +
Sbjct: 252 QVDPMKRATIKDIREHEWFKQ 272
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 118/267 (44%), Gaps = 25/267 (9%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALKQI---------PRERQPQQITRAEYNLLSTLMHAHI 158
LG+G V+ A +R T + VA++ I RE P E +L L H I
Sbjct: 157 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 216
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
F+ IV++L+ G L + + E+ Q+ A+ LH
Sbjct: 217 IKIKNFFDAEDY----YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN 272
Query: 219 QIAHKDIRPENILMNG----AVLKLIDLGXXXXXXXXXLPDL-----EFASPEMLTSPAT 269
I H+D++PEN+L++ ++K+ D G L + +PE+L S T
Sbjct: 273 GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGT 332
Query: 270 AG--PSTDMWSLGVLLYILLSGVSPFLD-ESEEETRAHISVADYSFPPEQCGHISVPARE 326
AG + D WSLGV+L+I LSG PF + ++ + I+ Y+F PE +S A +
Sbjct: 333 AGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALD 392
Query: 327 LIGQLLNTHADKRPTAGQLLQVAWFAE 353
L+ +LL R T + L+ W +
Sbjct: 393 LVKKLLVVDPKARFTTEEALRHPWLQD 419
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 118/267 (44%), Gaps = 25/267 (9%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALKQI---------PRERQPQQITRAEYNLLSTLMHAHI 158
LG+G V+ A +R T + VA+K I RE P E +L L H I
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
F+ IV++L+ G L + + E+ Q+ A+ LH
Sbjct: 78 IKIKNFFDAEDY----YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN 133
Query: 219 QIAHKDIRPENILMNG----AVLKLIDLGXXXXXXXXXLPDL-----EFASPEMLTSPAT 269
I H+D++PEN+L++ ++K+ D G L + +PE+L S T
Sbjct: 134 GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGT 193
Query: 270 AG--PSTDMWSLGVLLYILLSGVSPFLD-ESEEETRAHISVADYSFPPEQCGHISVPARE 326
AG + D WSLGV+L+I LSG PF + ++ + I+ Y+F PE +S A +
Sbjct: 194 AGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALD 253
Query: 327 LIGQLLNTHADKRPTAGQLLQVAWFAE 353
L+ +LL R T + L+ W +
Sbjct: 254 LVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 119/256 (46%), Gaps = 18/256 (7%)
Query: 106 ERLGNGRFCTVRKARDRGTGQLVALKQIPRE--RQPQQITRAEYNL--LSTLMHAHIPTA 161
E LG G F V+ A T Q VALK I R+ ++ R E + L L H HI
Sbjct: 15 ETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHI--- 71
Query: 162 LALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQIA 221
+ L++ P +V++ GE L ++ + +TE +Q+ A+ H +I
Sbjct: 72 IKLYDVITTPTDIVMVIEYAGGE-LFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIV 130
Query: 222 HKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDL-----EFASPEMLTSPATAGPSTD 275
H+D++PEN+L++ + +K+ D G +A+PE++ AGP D
Sbjct: 131 HRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVD 190
Query: 276 MWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTH 335
+WS G++LY++L G PF DE ++ Y P +S A+ LI +++
Sbjct: 191 VWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMP----DFLSPGAQSLIRRMIVAD 246
Query: 336 ADKRPTAGQLLQVAWF 351
+R T ++ + WF
Sbjct: 247 PMQRITIQEIRRDPWF 262
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 118/267 (44%), Gaps = 25/267 (9%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALKQI---------PRERQPQQITRAEYNLLSTLMHAHI 158
LG+G V+ A +R T + VA+K I RE P E +L L H I
Sbjct: 17 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 76
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
F+ IV++L+ G L + + E+ Q+ A+ LH
Sbjct: 77 IKIKNFFDAEDY----YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN 132
Query: 219 QIAHKDIRPENILMNG----AVLKLIDLGXXXXXXXXXLPDL-----EFASPEMLTSPAT 269
I H+D++PEN+L++ ++K+ D G L + +PE+L S T
Sbjct: 133 GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGT 192
Query: 270 AG--PSTDMWSLGVLLYILLSGVSPFLD-ESEEETRAHISVADYSFPPEQCGHISVPARE 326
AG + D WSLGV+L+I LSG PF + ++ + I+ Y+F PE +S A +
Sbjct: 193 AGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALD 252
Query: 327 LIGQLLNTHADKRPTAGQLLQVAWFAE 353
L+ +LL R T + L+ W +
Sbjct: 253 LVKKLLVVDPKARFTTEEALRHPWLQD 279
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 118/267 (44%), Gaps = 25/267 (9%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALKQI---------PRERQPQQITRAEYNLLSTLMHAHI 158
LG+G V+ A +R T + VA+K I RE P E +L L H I
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
F+ IV++L+ G L + + E+ Q+ A+ LH
Sbjct: 78 IKIKNFFDAEDY----YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN 133
Query: 219 QIAHKDIRPENILMNG----AVLKLIDLGXXXXXXXXXLPDL-----EFASPEMLTSPAT 269
I H+D++PEN+L++ ++K+ D G L + +PE+L S T
Sbjct: 134 GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGT 193
Query: 270 AG--PSTDMWSLGVLLYILLSGVSPFLD-ESEEETRAHISVADYSFPPEQCGHISVPARE 326
AG + D WSLGV+L+I LSG PF + ++ + I+ Y+F PE +S A +
Sbjct: 194 AGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALD 253
Query: 327 LIGQLLNTHADKRPTAGQLLQVAWFAE 353
L+ +LL R T + L+ W +
Sbjct: 254 LVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 118/267 (44%), Gaps = 25/267 (9%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALKQI---------PRERQPQQITRAEYNLLSTLMHAHI 158
LG+G V+ A +R T + VA+K I RE P E +L L H I
Sbjct: 24 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 83
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
F+ IV++L+ G L + + E+ Q+ A+ LH
Sbjct: 84 IKIKNFFDAEDY----YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN 139
Query: 219 QIAHKDIRPENILMNG----AVLKLIDLGXXXXXXXXXLPDL-----EFASPEMLTSPAT 269
I H+D++PEN+L++ ++K+ D G L + +PE+L S T
Sbjct: 140 GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGT 199
Query: 270 AG--PSTDMWSLGVLLYILLSGVSPFLD-ESEEETRAHISVADYSFPPEQCGHISVPARE 326
AG + D WSLGV+L+I LSG PF + ++ + I+ Y+F PE +S A +
Sbjct: 200 AGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALD 259
Query: 327 LIGQLLNTHADKRPTAGQLLQVAWFAE 353
L+ +LL R T + L+ W +
Sbjct: 260 LVKKLLVVDPKARFTTEEALRHPWLQD 286
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 128/275 (46%), Gaps = 25/275 (9%)
Query: 92 RWQQEQFEHRYEELER-LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQITRA 145
+W E FE + R LG G+F V AR++ + ++ALK Q+ + Q+ R
Sbjct: 9 QWALEDFE-----IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR- 62
Query: 146 EYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCII 205
E + S L H +I F +A ++++ ++ + L + S E I
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDAT---RVYLILEYAPLGTVYRELQKLSKFDEQRTATYI 119
Query: 206 RQLHSALHCLHSQQIAHKDIRPENILMNGA-VLKLIDLGXX----XXXXXXXLPDLEFAS 260
+L +AL HS+++ H+DI+PEN+L+ A LK+ D G L++
Sbjct: 120 TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLP 179
Query: 261 PEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHI 320
PE + D+WSLGVL Y L G PF + +ET IS +++FP +
Sbjct: 180 PEXIEG-RXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFV 234
Query: 321 SVPARELIGQLLNTHADKRPTAGQLLQVAWFAEAS 355
+ AR+LI +LL + +RP ++L+ W S
Sbjct: 235 TEGARDLISRLLKHNPSQRPXLREVLEHPWITANS 269
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 131/278 (47%), Gaps = 26/278 (9%)
Query: 96 EQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALK--QIPRER-QPQQI------TRAE 146
++F +Y+ + +G G VR+ R TG A+K ++ ER P+Q+ TR E
Sbjct: 90 KEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRE 149
Query: 147 YNLLSTLM-HAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCII 205
++L + H HI T + +E++ +V L+ L +L + ++E I+
Sbjct: 150 THILRQVAGHPHIITLIDSYESSSFM---FLVFDLMRKGELFDYLTEKVALSEKETRSIM 206
Query: 206 RQLHSALHCLHSQQIAHKDIRPENILMNGAV-LKLIDLGXX-XXXXXXXLPDL----EFA 259
R L A+ LH+ I H+D++PENIL++ + ++L D G L +L +
Sbjct: 207 RSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYL 266
Query: 260 SPEML------TSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFP 313
+PE+L T P G D+W+ GV+L+ LL+G PF + I Y F
Sbjct: 267 APEILKCSMDETHPGY-GKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFS 325
Query: 314 PEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF 351
+ S ++LI +LL + R TA Q LQ +F
Sbjct: 326 SPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFF 363
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 121/271 (44%), Gaps = 22/271 (8%)
Query: 97 QFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPR-ERQPQQITRAEYNLLSTLMH 155
QF YE E +G G + ++ + T A+K I + +R P + LL H
Sbjct: 19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEI---LLRYGQH 75
Query: 156 AHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+I T ++++ +V +L+ G L+ + RQ +E ++ + + L
Sbjct: 76 PNIITLKDVYDDGKYV---YVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYL 132
Query: 216 HSQQIAHKDIRPENILM-----NGAVLKLIDLGXXXXXXXXX------LPDLEFASPEML 264
H+Q + H+D++P NIL N +++ D G F +PE+L
Sbjct: 133 HAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVL 192
Query: 265 TSPATAGPSTDMWSLGVLLYILLSGVSPFL---DESEEETRAHISVADYSFPPEQCGHIS 321
+ D+WSLGVLLY +L+G +PF D++ EE A I +S +S
Sbjct: 193 ERQGYDA-ACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVS 251
Query: 322 VPARELIGQLLNTHADKRPTAGQLLQVAWFA 352
A++L+ ++L+ +R TA +L+ W
Sbjct: 252 DTAKDLVSKMLHVDPHQRLTAALVLRHPWIV 282
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 121/271 (44%), Gaps = 31/271 (11%)
Query: 97 QFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQI---------TRAEY 147
++ +Y + LG+G F V A D+ + V +K I +E+ + E
Sbjct: 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEI 80
Query: 148 NLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESL--IQHLCRQSTITESYICCII 205
+LS + HA+I L +FEN G +VM+ HG L + R + E I
Sbjct: 81 AILSRVEHANIIKVLDIFENQ---GFFQLVME-KHGSGLDLFAFIDRHPRLDEPLASYIF 136
Query: 206 RQLHSALHCLHSQQIAHKDIRPENILM-NGAVLKLIDLGXXXXXXXXXL-----PDLEFA 259
RQL SA+ L + I H+DI+ ENI++ +KLID G L +E+
Sbjct: 137 RQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYC 196
Query: 260 SPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGH 319
+PE+L GP +MWSLGV LY L+ +PF E EE A I PP
Sbjct: 197 APEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFC-ELEETVEAAIH------PPYL--- 246
Query: 320 ISVPARELIGQLLNTHADKRPTAGQLLQVAW 350
+S L+ LL ++R T +L+ W
Sbjct: 247 VSKELMSLVSGLLQPVPERRTTLEKLVTDPW 277
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 113/258 (43%), Gaps = 19/258 (7%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQITRAEYNLLSTLMHAHIPTAL 162
LG G+F V AR++ ++ALK Q+ +E Q+ R E + S L H +I
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRR-EIEIQSHLRHPNILRMY 80
Query: 163 ALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQIAH 222
F + ++++ L + L + E + +L ALH H +++ H
Sbjct: 81 NYFHDR---KRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIH 137
Query: 223 KDIRPENILMN-GAVLKLIDLG----XXXXXXXXXLPDLEFASPEMLTSPATAGPSTDMW 277
+DI+PEN+LM LK+ D G L++ PEM+ T D+W
Sbjct: 138 RDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEG-KTHDEKVDLW 196
Query: 278 SLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHAD 337
GVL Y L G+ PF S ET I D FPP +S +++LI +LL H
Sbjct: 197 CAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPP----FLSDGSKDLISKLLRYHPP 252
Query: 338 KRPTAGQLLQVAWFAEAS 355
+R +++ W S
Sbjct: 253 QRLPLKGVMEHPWVKANS 270
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 113/258 (43%), Gaps = 19/258 (7%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQITRAEYNLLSTLMHAHIPTAL 162
LG G+F V AR++ ++ALK Q+ +E Q+ R E + S L H +I
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRR-EIEIQSHLRHPNILRMY 81
Query: 163 ALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQIAH 222
F + ++++ L + L + E + +L ALH H +++ H
Sbjct: 82 NYFHDR---KRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIH 138
Query: 223 KDIRPENILMN-GAVLKLIDLG----XXXXXXXXXLPDLEFASPEMLTSPATAGPSTDMW 277
+DI+PEN+LM LK+ D G L++ PEM+ T D+W
Sbjct: 139 RDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEG-KTHDEKVDLW 197
Query: 278 SLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHAD 337
GVL Y L G+ PF S ET I D FPP +S +++LI +LL H
Sbjct: 198 CAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPP----FLSDGSKDLISKLLRYHPP 253
Query: 338 KRPTAGQLLQVAWFAEAS 355
+R +++ W S
Sbjct: 254 QRLPLKGVMEHPWVKANS 271
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 113/258 (43%), Gaps = 19/258 (7%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQITRAEYNLLSTLMHAHIPTAL 162
LG G+F V AR++ ++ALK Q+ +E Q+ R E + S L H +I
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRR-EIEIQSHLRHPNILRMY 80
Query: 163 ALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQIAH 222
F + ++++ L + L + E + +L ALH H +++ H
Sbjct: 81 NYFHDR---KRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIH 137
Query: 223 KDIRPENILMN-GAVLKLIDLG----XXXXXXXXXLPDLEFASPEMLTSPATAGPSTDMW 277
+DI+PEN+LM LK+ D G L++ PEM+ T D+W
Sbjct: 138 RDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEG-KTHDEKVDLW 196
Query: 278 SLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHAD 337
GVL Y L G+ PF S ET I D FPP +S +++LI +LL H
Sbjct: 197 CAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPP----FLSDGSKDLISKLLRYHPP 252
Query: 338 KRPTAGQLLQVAWFAEAS 355
+R +++ W S
Sbjct: 253 QRLPLKGVMEHPWVKANS 270
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 118/270 (43%), Gaps = 22/270 (8%)
Query: 97 QFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPR-ERQPQQITRAEYNLLSTLMH 155
QF YE E +G G + ++ + T A+K I + +R P + LL H
Sbjct: 19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEI---LLRYGQH 75
Query: 156 AHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+I T ++++ +V +L G L+ + RQ +E ++ + + L
Sbjct: 76 PNIITLKDVYDDGKYV---YVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYL 132
Query: 216 HSQQIAHKDIRPENILM-----NGAVLKLIDLGXXXXXXXXX------LPDLEFASPEML 264
H+Q + H+D++P NIL N +++ D G F +PE+L
Sbjct: 133 HAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAPEVL 192
Query: 265 TSPATAGPSTDMWSLGVLLYILLSGVSPFL---DESEEETRAHISVADYSFPPEQCGHIS 321
+ D+WSLGVLLY L+G +PF D++ EE A I +S +S
Sbjct: 193 ERQGYDA-ACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVS 251
Query: 322 VPARELIGQLLNTHADKRPTAGQLLQVAWF 351
A++L+ + L+ +R TA +L+ W
Sbjct: 252 DTAKDLVSKXLHVDPHQRLTAALVLRHPWI 281
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 121/276 (43%), Gaps = 22/276 (7%)
Query: 93 WQQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPR-ERQPQQITRAEYNLLS 151
+Q F Y E +G G + ++ + T A+K I + +R P + LL
Sbjct: 20 FQSMVFSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEI---LLR 76
Query: 152 TLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSA 211
H +I T ++++ +V +L+ G L+ + RQ +E ++ +
Sbjct: 77 YGQHPNIITLKDVYDDGK---HVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKT 133
Query: 212 LHCLHSQQIAHKDIRPENILM-----NGAVLKLIDLGXXXXXXXXX------LPDLEFAS 260
+ LHSQ + H+D++P NIL N L++ D G F +
Sbjct: 134 VEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVA 193
Query: 261 PEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLD---ESEEETRAHISVADYSFPPEQC 317
PE+L D+WSLG+LLY +L+G +PF + ++ EE I ++
Sbjct: 194 PEVLKRQG-YDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNW 252
Query: 318 GHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAE 353
+S A++L+ ++L+ +R TA Q+LQ W +
Sbjct: 253 NTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQ 288
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 128/297 (43%), Gaps = 44/297 (14%)
Query: 96 EQFEHRYEEL-----ERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLL 150
+ F R+E++ + LG G V+ + T Q A+K I E+QP I + +
Sbjct: 4 DSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKII--EKQPGHIRSRVFREV 61
Query: 151 STLMHAHIPTALALFENAPVPGTD-TIVMQLVHGESLIQHLCRQSTITESYICCIIRQLH 209
L + +V + + G S++ H+ ++ E +++ +
Sbjct: 62 EMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVA 121
Query: 210 SALHCLHSQQIAHKDIRPENILMNG----AVLKLIDLGXXXXXXXX------XLPDL--- 256
SAL LH++ IAH+D++PENIL + +K+ D G P+L
Sbjct: 122 SALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTP 181
Query: 257 ----EFASPEMLTS----PATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETR------ 302
E+ +PE++ + + D+WSLGV+LYILLSG PF+ +
Sbjct: 182 CGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEA 241
Query: 303 ---------AHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW 350
I Y FP + HIS A++LI +LL A +R +A Q+LQ W
Sbjct: 242 CPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPW 298
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 126/300 (42%), Gaps = 50/300 (16%)
Query: 96 EQFEHRYEEL-----ERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLL 150
+ F R+E++ + LG G V+ + T Q A+K I E+QP I + +
Sbjct: 4 DSFSGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKII--EKQPGHIRSRVFREV 61
Query: 151 STLMHAHIPTALALFENAPVPGTD-TIVMQLVHGESLIQHLCRQSTITESYICCIIRQLH 209
L + +V + + G S++ H+ ++ E +++ +
Sbjct: 62 EMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVA 121
Query: 210 SALHCLHSQQIAHKDIRPENIL------MNGAVLKLIDLGXXXXXXXXXLPDLEFASPEM 263
SAL LH++ IAH+D++PENIL ++ + DLG P ++PE+
Sbjct: 122 SALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSP---ISTPEL 178
Query: 264 LTSPATA------------------GPSTDMWSLGVLLYILLSGVSPFLDESEEETR--- 302
LT +A D+WSLGV+LYILLSG PF+ +
Sbjct: 179 LTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDR 238
Query: 303 ------------AHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAW 350
I Y FP + HIS A++LI +LL A +R +A Q+LQ W
Sbjct: 239 GEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPW 298
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 119/271 (43%), Gaps = 22/271 (8%)
Query: 98 FEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPR-ERQPQQITRAEYNLLSTLMHA 156
F Y E +G G + ++ + T A+K I + +R P + LL H
Sbjct: 25 FSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEI---LLRYGQHP 81
Query: 157 HIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLH 216
+I T ++++ +V +L+ G L+ + RQ +E ++ + + LH
Sbjct: 82 NIITLKDVYDDGK---HVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLH 138
Query: 217 SQQIAHKDIRPENILM-----NGAVLKLIDLGXXXXXXXXX------LPDLEFASPEMLT 265
SQ + H+D++P NIL N L++ D G F +PE+L
Sbjct: 139 SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLK 198
Query: 266 SPATAGPSTDMWSLGVLLYILLSGVSPFLD---ESEEETRAHISVADYSFPPEQCGHISV 322
D+WSLG+LLY +L+G +PF + ++ EE I ++ +S
Sbjct: 199 RQG-YDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSE 257
Query: 323 PARELIGQLLNTHADKRPTAGQLLQVAWFAE 353
A++L+ ++L+ +R TA Q+LQ W +
Sbjct: 258 TAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQ 288
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 122/289 (42%), Gaps = 30/289 (10%)
Query: 110 NGRFCTVRKARDRGTGQLVALKQIPRERQPQQIT-RAEYNLLSTLMHAHIPTALALFENA 168
NG+ + R + L L+ P+ R+ ++ RA HI + ++EN
Sbjct: 31 NGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRAS-------QCPHIVRIVDVYENL 83
Query: 169 PVPGTDT--IVMQLVHGESLIQHLCRQS--TITESYICCIIRQLHSALHCLHSQQIAHKD 224
G IVM+ + G L + + TE I++ + A+ LHS IAH+D
Sbjct: 84 -YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 142
Query: 225 IRPENILMN----GAVLKLIDLGXXXXXXX---XXLPDLE--FASPEMLTSPATAGPSTD 275
++PEN+L A+LKL D G P + +PE+L P S D
Sbjct: 143 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-GPEKYDKSCD 201
Query: 276 MWSLGVLLYILLSGVSPFLDES----EEETRAHISVADYSFPPEQCGHISVPARELIGQL 331
MWSLGV++YILL G PF + I + Y FP + +S + LI L
Sbjct: 202 MWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNL 261
Query: 332 LNTHADKRPTAGQLLQVAWFAEASC---SEFDTERLLPFSARRKQKFKE 377
L T +R T + + W +++ + T R+L R + KE
Sbjct: 262 LKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKERWEDVKE 310
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 122/289 (42%), Gaps = 30/289 (10%)
Query: 110 NGRFCTVRKARDRGTGQLVALKQIPRERQPQQI-TRAEYNLLSTLMHAHIPTALALFENA 168
NG+ + R + L L+ P+ R+ ++ RA HI + ++EN
Sbjct: 30 NGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRAS-------QCPHIVRIVDVYENL 82
Query: 169 PVPGTDT--IVMQLVHGESLIQHLCRQS--TITESYICCIIRQLHSALHCLHSQQIAHKD 224
G IVM+ + G L + + TE I++ + A+ LHS IAH+D
Sbjct: 83 -YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 141
Query: 225 IRPENILMN----GAVLKLIDLGXXXXXXX---XXLPDLE--FASPEMLTSPATAGPSTD 275
++PEN+L A+LKL D G P + +PE+L P S D
Sbjct: 142 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-GPEKYDKSCD 200
Query: 276 MWSLGVLLYILLSGVSPFLDES----EEETRAHISVADYSFPPEQCGHISVPARELIGQL 331
MWSLGV++YILL G PF + I + Y FP + +S + LI L
Sbjct: 201 MWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNL 260
Query: 332 LNTHADKRPTAGQLLQVAWFAEASC---SEFDTERLLPFSARRKQKFKE 377
L T +R T + + W +++ + T R+L R + KE
Sbjct: 261 LKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKERWEDVKE 309
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 122/289 (42%), Gaps = 30/289 (10%)
Query: 110 NGRFCTVRKARDRGTGQLVALKQIPRERQPQQI-TRAEYNLLSTLMHAHIPTALALFENA 168
NG+ + R + L L+ P+ R+ ++ RA HI + ++EN
Sbjct: 35 NGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRAS-------QCPHIVRIVDVYENL 87
Query: 169 PVPGTDT--IVMQLVHGESLIQHLCRQS--TITESYICCIIRQLHSALHCLHSQQIAHKD 224
G IVM+ + G L + + TE I++ + A+ LHS IAH+D
Sbjct: 88 -YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 146
Query: 225 IRPENILMN----GAVLKLIDLGXXXXXXX---XXLPDLE--FASPEMLTSPATAGPSTD 275
++PEN+L A+LKL D G P + +PE+L P S D
Sbjct: 147 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-GPEKYDKSCD 205
Query: 276 MWSLGVLLYILLSGVSPFLDES----EEETRAHISVADYSFPPEQCGHISVPARELIGQL 331
MWSLGV++YILL G PF + I + Y FP + +S + LI L
Sbjct: 206 MWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNL 265
Query: 332 LNTHADKRPTAGQLLQVAWFAEASC---SEFDTERLLPFSARRKQKFKE 377
L T +R T + + W +++ + T R+L R + KE
Sbjct: 266 LKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKERWEDVKE 314
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 122/289 (42%), Gaps = 30/289 (10%)
Query: 110 NGRFCTVRKARDRGTGQLVALKQIPRERQPQQI-TRAEYNLLSTLMHAHIPTALALFENA 168
NG+ + R + L L+ P+ R+ ++ RA HI + ++EN
Sbjct: 29 NGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRAS-------QCPHIVRIVDVYENL 81
Query: 169 PVPGTDT--IVMQLVHGESLIQHLCRQS--TITESYICCIIRQLHSALHCLHSQQIAHKD 224
G IVM+ + G L + + TE I++ + A+ LHS IAH+D
Sbjct: 82 -YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 140
Query: 225 IRPENILMN----GAVLKLIDLGXXXXXXX---XXLPDLE--FASPEMLTSPATAGPSTD 275
++PEN+L A+LKL D G P + +PE+L P S D
Sbjct: 141 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-GPEKYDKSCD 199
Query: 276 MWSLGVLLYILLSGVSPFLDES----EEETRAHISVADYSFPPEQCGHISVPARELIGQL 331
MWSLGV++YILL G PF + I + Y FP + +S + LI L
Sbjct: 200 MWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNL 259
Query: 332 LNTHADKRPTAGQLLQVAWFAEASC---SEFDTERLLPFSARRKQKFKE 377
L T +R T + + W +++ + T R+L R + KE
Sbjct: 260 LKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKERWEDVKE 308
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 122/289 (42%), Gaps = 30/289 (10%)
Query: 110 NGRFCTVRKARDRGTGQLVALKQIPRERQPQQI-TRAEYNLLSTLMHAHIPTALALFENA 168
NG+ + R + L L+ P+ R+ ++ RA HI + ++EN
Sbjct: 36 NGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRAS-------QCPHIVRIVDVYENL 88
Query: 169 PVPGTDT--IVMQLVHGESLIQHLCRQS--TITESYICCIIRQLHSALHCLHSQQIAHKD 224
G IVM+ + G L + + TE I++ + A+ LHS IAH+D
Sbjct: 89 -YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 147
Query: 225 IRPENILMN----GAVLKLIDLGXXXXXXX---XXLPDLE--FASPEMLTSPATAGPSTD 275
++PEN+L A+LKL D G P + +PE+L P S D
Sbjct: 148 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-GPEKYDKSCD 206
Query: 276 MWSLGVLLYILLSGVSPFLDES----EEETRAHISVADYSFPPEQCGHISVPARELIGQL 331
MWSLGV++YILL G PF + I + Y FP + +S + LI L
Sbjct: 207 MWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNL 266
Query: 332 LNTHADKRPTAGQLLQVAWFAEASC---SEFDTERLLPFSARRKQKFKE 377
L T +R T + + W +++ + T R+L R + KE
Sbjct: 267 LKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKERWEDVKE 315
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 122/289 (42%), Gaps = 30/289 (10%)
Query: 110 NGRFCTVRKARDRGTGQLVALKQIPRERQPQQIT-RAEYNLLSTLMHAHIPTALALFENA 168
NG+ + R + L L+ P+ R+ ++ RA HI + ++EN
Sbjct: 31 NGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRAS-------QCPHIVRIVDVYENL 83
Query: 169 PVPGTDT--IVMQLVHGESLIQHLCRQS--TITESYICCIIRQLHSALHCLHSQQIAHKD 224
G IVM+ + G L + + TE I++ + A+ LHS IAH+D
Sbjct: 84 -YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 142
Query: 225 IRPENILMN----GAVLKLIDLGXXXXXXX---XXLPDLE--FASPEMLTSPATAGPSTD 275
++PEN+L A+LKL D G P + +PE+L P S D
Sbjct: 143 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-GPEKYDKSCD 201
Query: 276 MWSLGVLLYILLSGVSPFLDES----EEETRAHISVADYSFPPEQCGHISVPARELIGQL 331
MWSLGV++YILL G PF + I + Y FP + +S + LI L
Sbjct: 202 MWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNL 261
Query: 332 LNTHADKRPTAGQLLQVAWFAEASC---SEFDTERLLPFSARRKQKFKE 377
L T +R T + + W +++ + T R+L R + KE
Sbjct: 262 LKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKERWEDVKE 310
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 122/289 (42%), Gaps = 30/289 (10%)
Query: 110 NGRFCTVRKARDRGTGQLVALKQIPRERQPQQIT-RAEYNLLSTLMHAHIPTALALFENA 168
NG+ + R + L L+ P+ R+ ++ RA HI + ++EN
Sbjct: 37 NGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRAS-------QCPHIVRIVDVYENL 89
Query: 169 PVPGTDT--IVMQLVHGESLIQHLCRQS--TITESYICCIIRQLHSALHCLHSQQIAHKD 224
G IVM+ + G L + + TE I++ + A+ LHS IAH+D
Sbjct: 90 -YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 148
Query: 225 IRPENILMN----GAVLKLIDLGXXXXXXX---XXLPDLE--FASPEMLTSPATAGPSTD 275
++PEN+L A+LKL D G P + +PE+L P S D
Sbjct: 149 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-GPEKYDKSCD 207
Query: 276 MWSLGVLLYILLSGVSPFLDES----EEETRAHISVADYSFPPEQCGHISVPARELIGQL 331
MWSLGV++YILL G PF + I + Y FP + +S + LI L
Sbjct: 208 MWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNL 267
Query: 332 LNTHADKRPTAGQLLQVAWFAEASC---SEFDTERLLPFSARRKQKFKE 377
L T +R T + + W +++ + T R+L R + KE
Sbjct: 268 LKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKERWEDVKE 316
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 121/289 (41%), Gaps = 30/289 (10%)
Query: 110 NGRFCTVRKARDRGTGQLVALKQIPRERQPQQI-TRAEYNLLSTLMHAHIPTALALFENA 168
NG+ + R + L L+ P+ R+ ++ RA HI + ++EN
Sbjct: 29 NGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRAS-------QCPHIVRIVDVYENL 81
Query: 169 PVPGTDT--IVMQLVHGESLIQHLCRQS--TITESYICCIIRQLHSALHCLHSQQIAHKD 224
G IVM+ + G L + + TE I++ + A+ LHS IAH+D
Sbjct: 82 -YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 140
Query: 225 IRPENILMN----GAVLKLIDLGXXXXXXXXX-----LPDLEFASPEMLTSPATAGPSTD 275
++PEN+L A+LKL D G + +PE+L P S D
Sbjct: 141 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEVL-GPEKYDKSCD 199
Query: 276 MWSLGVLLYILLSGVSPFLDES----EEETRAHISVADYSFPPEQCGHISVPARELIGQL 331
MWSLGV++YILL G PF + I + Y FP + +S + LI L
Sbjct: 200 MWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNL 259
Query: 332 LNTHADKRPTAGQLLQVAWFAEASC---SEFDTERLLPFSARRKQKFKE 377
L T +R T + + W +++ + T R+L R + KE
Sbjct: 260 LKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKERWEDVKE 308
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 122/289 (42%), Gaps = 30/289 (10%)
Query: 110 NGRFCTVRKARDRGTGQLVALKQIPRERQPQQIT-RAEYNLLSTLMHAHIPTALALFENA 168
NG+ + R + L L+ P+ R+ ++ RA HI + ++EN
Sbjct: 75 NGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRAS-------QCPHIVRIVDVYENL 127
Query: 169 PVPGTDT--IVMQLVHGESLIQHLCRQS--TITESYICCIIRQLHSALHCLHSQQIAHKD 224
G IVM+ + G L + + TE I++ + A+ LHS IAH+D
Sbjct: 128 -YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 186
Query: 225 IRPENILMN----GAVLKLIDLGXXXXXXX---XXLPDLE--FASPEMLTSPATAGPSTD 275
++PEN+L A+LKL D G P + +PE+L P S D
Sbjct: 187 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-GPEKYDKSCD 245
Query: 276 MWSLGVLLYILLSGVSPFLDES----EEETRAHISVADYSFPPEQCGHISVPARELIGQL 331
MWSLGV++YILL G PF + I + Y FP + +S + LI L
Sbjct: 246 MWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNL 305
Query: 332 LNTHADKRPTAGQLLQVAWFAEASC---SEFDTERLLPFSARRKQKFKE 377
L T +R T + + W +++ + T R+L R + KE
Sbjct: 306 LKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKERWEDVKE 354
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 123/248 (49%), Gaps = 27/248 (10%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQITRAEYNLLSTLMHAHIPTAL 162
LG G F TV AR+ T + A+K I +E + +TR E +++S L H
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHPFFVKLY 98
Query: 163 ALFENAPVPGTDTIVMQLVHGES--LIQHLCRQSTITESYICCIIRQLHSALHCLHSQQI 220
F++ + + L + ++ L++++ + + E+ ++ SAL LH + I
Sbjct: 99 FTFQD-----DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 221 AHKDIRPENILMNGAV-LKLIDLGXXX--------XXXXXXLPDLEFASPEMLTSPATAG 271
H+D++PENIL+N + +++ D G + ++ SPE+LT +A
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE-KSAX 212
Query: 272 PSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQL 331
S+D+W+LG ++Y L++G+ PF +E A I +Y FP + AR+L+ +L
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEK----FFPKARDLVEKL 268
Query: 332 LNTHADKR 339
L A KR
Sbjct: 269 LVLDATKR 276
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 97/220 (44%), Gaps = 19/220 (8%)
Query: 176 IVMQLVHGESLIQHLCRQS--TITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILMN 233
IVM+ + G L + + TE I++ + A+ LHS IAH+D++PEN+L
Sbjct: 106 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 165
Query: 234 ----GAVLKLIDLGXXXXXXX---XXLPDLE--FASPEMLTSPATAGPSTDMWSLGVLLY 284
A+LKL D G P + +PE+L P S DMWSLGV++Y
Sbjct: 166 SKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-GPEKYDKSCDMWSLGVIMY 224
Query: 285 ILLSGVSPFLDES----EEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRP 340
ILL G PF + I + Y FP + +S + LI LL T +R
Sbjct: 225 ILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRM 284
Query: 341 TAGQLLQVAWFAEASC---SEFDTERLLPFSARRKQKFKE 377
T + + W +++ + T R+L R + KE
Sbjct: 285 TITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKERWEDVKE 324
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 122/289 (42%), Gaps = 30/289 (10%)
Query: 110 NGRFCTVRKARDRGTGQLVALKQIPRERQPQQIT-RAEYNLLSTLMHAHIPTALALFENA 168
NG+ + R + L L+ P+ R+ ++ RA HI + ++EN
Sbjct: 81 NGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRAS-------QCPHIVRIVDVYENL 133
Query: 169 PVPGTDT--IVMQLVHGESLIQHLCRQS--TITESYICCIIRQLHSALHCLHSQQIAHKD 224
G IVM+ + G L + + TE I++ + A+ LHS IAH+D
Sbjct: 134 -YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRD 192
Query: 225 IRPENILMN----GAVLKLIDLGXXXXXXX---XXLPDLE--FASPEMLTSPATAGPSTD 275
++PEN+L A+LKL D G P + +PE+L P S D
Sbjct: 193 VKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-GPEKYDKSCD 251
Query: 276 MWSLGVLLYILLSGVSPFLDES----EEETRAHISVADYSFPPEQCGHISVPARELIGQL 331
MWSLGV++YILL G PF + I + Y FP + +S + LI L
Sbjct: 252 MWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNL 311
Query: 332 LNTHADKRPTAGQLLQVAWFAEASC---SEFDTERLLPFSARRKQKFKE 377
L T +R T + + W +++ + T R+L R + KE
Sbjct: 312 LKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKERWEDVKE 360
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 119/258 (46%), Gaps = 17/258 (6%)
Query: 102 YEELERLGNGRFCTV---RKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHI 158
+E L+ LG G + V RK TG+L A+K + + Q+ E+ + HI
Sbjct: 56 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHI 115
Query: 159 PTALALFENAPVPGTDT---IVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L T+T +++ ++G L HL ++ TE + + ++ AL L
Sbjct: 116 RQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHL 175
Query: 216 HSQQIAHKDIRPENILM--NGAVLKLIDLGXXXXXXXXXLP-------DLEFASPEMLTS 266
H I ++DI+ ENIL+ NG V+ L D G +E+ +P+++
Sbjct: 176 HKLGIIYRDIKLENILLDSNGHVV-LTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRG 234
Query: 267 PATA-GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAR 325
+ + D WSLGVL+Y LL+G SPF + E+ ++A IS P +S A+
Sbjct: 235 GDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAK 294
Query: 326 ELIGQLLNTHADKRPTAG 343
+LI +LL KR G
Sbjct: 295 DLIQRLLMKDPKKRLGCG 312
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 117/252 (46%), Gaps = 28/252 (11%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRE---RQPQ-QITRAEYNLLSTLMHAH 157
++ L LG G F V R R G+ A+K + +E R Q + T E +LS + H
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPF 67
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHS 217
I F++A ++M + G L L + ++ AL LHS
Sbjct: 68 IIRMWGTFQDAQ---QIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHS 124
Query: 218 QQIAHKDIRPENILM--NGAVLKLIDLGXXXXXXXXXLPDL--------EFASPEMLTSP 267
+ I ++D++PENIL+ NG + K+ D G +PD+ ++ +PE++++
Sbjct: 125 KDIIYRDLKPENILLDKNGHI-KITDFGFAKY-----VPDVTYXLCGTPDYIAPEVVST- 177
Query: 268 ATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAREL 327
S D WS G+L+Y +L+G +PF D + +T I A+ FPP + ++L
Sbjct: 178 KPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPP----FFNEDVKDL 233
Query: 328 IGQLLNTHADKR 339
+ +L+ +R
Sbjct: 234 LSRLITRDLSQR 245
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 123/248 (49%), Gaps = 27/248 (10%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQITRAEYNLLSTLMHAHIPTAL 162
LG G F TV AR+ T + A+K I +E + +TR E +++S L H
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHPFFVKLY 98
Query: 163 ALFENAPVPGTDTIVMQLVHGES--LIQHLCRQSTITESYICCIIRQLHSALHCLHSQQI 220
F++ + + L + ++ L++++ + + E+ ++ SAL LH + I
Sbjct: 99 FTFQD-----DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 221 AHKDIRPENILMNGAV-LKLIDLGXXX--------XXXXXXLPDLEFASPEMLTSPATAG 271
H+D++PENIL+N + +++ D G + ++ SPE+LT +A
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE-KSAC 212
Query: 272 PSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQL 331
S+D+W+LG ++Y L++G+ PF +E A I +Y FP + AR+L+ +L
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEK----FFPKARDLVEKL 268
Query: 332 LNTHADKR 339
L A KR
Sbjct: 269 LVLDATKR 276
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 129/292 (44%), Gaps = 46/292 (15%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIP---RERQPQQITRA---EYNLLSTLM 154
RYE+L+ LG G+F TV KARD+ T Q+VA+K+I R I R E LL L
Sbjct: 11 RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS 70
Query: 155 HAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQST--ITESYICCIIRQLHSAL 212
H +I L F + I + E+ ++ + + ++ +T S+I + L
Sbjct: 71 HPNIIGLLDAFGH-----KSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGL 125
Query: 213 HCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXXXX------XXXXXLPDLEFASPEMLT 265
LH I H+D++P N+L++ VLKL D G + + +PE+L
Sbjct: 126 EYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLF 185
Query: 266 SPATAGPSTDMWSLGVLLYILLSGVSPFL-----------------DESEEETRAHISVA 308
G DMW++G +L LL V PFL +EE+ S+
Sbjct: 186 GARMYGVGVDMWAVGCILAELLLRV-PFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLP 244
Query: 309 DY----SFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFA 352
DY SFP HI A +LI L + R TA Q L++ +F+
Sbjct: 245 DYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFS 296
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 122/284 (42%), Gaps = 25/284 (8%)
Query: 97 QFEHRYEELER---LGNGRFCTVRKARDRGTGQLVALKQIP-RERQPQQITRAEYNLLST 152
++++ Y+E LG G + V RD +A+K+IP R+ + Q E L
Sbjct: 16 EYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKH 75
Query: 153 LMHAHIPTALALF-ENAPVPGTDTIVMQLVHGESLIQHLCRQS----TITESYICCIIRQ 207
L H +I L F EN G I M+ V G SL L R E I +Q
Sbjct: 76 LKHKNIVQYLGSFSEN----GFIKIFMEQVPGGSL-SALLRSKWGPLKDNEQTIGFYTKQ 130
Query: 208 LHSALHCLHSQQIAHKDIRPENILMN--GAVLKLIDLGXXXXXX------XXXLPDLEFA 259
+ L LH QI H+DI+ +N+L+N VLK+ D G L++
Sbjct: 131 ILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYM 190
Query: 260 SPEML-TSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCG 318
+PE++ P G + D+WSLG + + +G PF + E + A V + PE
Sbjct: 191 APEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQA-AMFKVGMFKVHPEIPE 249
Query: 319 HISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEASCSEFDTE 362
+S A+ I + DKR A LL V F + S + T+
Sbjct: 250 SMSAEAKAFILKCFEPDPDKRACANDLL-VDEFLKVSSKKKKTQ 292
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 121/248 (48%), Gaps = 27/248 (10%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQITRAEYNLLSTLMHAHIPTAL 162
LG G F TV AR+ T + A+K I +E + +TR E +++S L H
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHPFFVKLY 98
Query: 163 ALFENAPVPGTDTIVMQLVHGES--LIQHLCRQSTITESYICCIIRQLHSALHCLHSQQI 220
F++ + + L + ++ L++++ + + E+ ++ SAL LH + I
Sbjct: 99 FTFQD-----DEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 221 AHKDIRPENILMNGAV-LKLIDLGXXX--------XXXXXXLPDLEFASPEMLTSPATAG 271
H+D++PENIL+N + +++ D G + ++ SPE+LT +A
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE-KSAS 212
Query: 272 PSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQL 331
S+D+W+LG ++Y L++G+ PF +E I +Y FP + AR+L+ +L
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDLVEKL 268
Query: 332 LNTHADKR 339
L A KR
Sbjct: 269 LVLDATKR 276
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 115/268 (42%), Gaps = 24/268 (8%)
Query: 97 QFEHRYEELER---LGNGRFCTVRKARDRGTGQLVALKQIP-RERQPQQITRAEYNLLST 152
++++ Y+E LG G + V RD +A+K+IP R+ + Q E L
Sbjct: 2 EYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKH 61
Query: 153 LMHAHIPTALALF-ENAPVPGTDTIVMQLVHGESLIQHLCRQS----TITESYICCIIRQ 207
L H +I L F EN G I M+ V G SL L R E I +Q
Sbjct: 62 LKHKNIVQYLGSFSEN----GFIKIFMEQVPGGSL-SALLRSKWGPLKDNEQTIGFYTKQ 116
Query: 208 LHSALHCLHSQQIAHKDIRPENILMN--GAVLKLIDLGXXXXXX------XXXLPDLEFA 259
+ L LH QI H+DI+ +N+L+N VLK+ D G L++
Sbjct: 117 ILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQYM 176
Query: 260 SPEML-TSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCG 318
+PE++ P G + D+WSLG + + +G PF + E + A V + PE
Sbjct: 177 APEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQA-AMFKVGMFKVHPEIPE 235
Query: 319 HISVPARELIGQLLNTHADKRPTAGQLL 346
+S A+ I + DKR A LL
Sbjct: 236 SMSAEAKAFILKCFEPDPDKRACANDLL 263
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 121/248 (48%), Gaps = 27/248 (10%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQITRAEYNLLSTLMHAHIPTAL 162
LG G F TV AR+ T + A+K I +E + +TR E +++S L H
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHPFFVKLY 95
Query: 163 ALFENAPVPGTDTIVMQLVHGES--LIQHLCRQSTITESYICCIIRQLHSALHCLHSQQI 220
F++ + + L + ++ L++++ + + E+ ++ SAL LH + I
Sbjct: 96 FTFQD-----DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 150
Query: 221 AHKDIRPENILMNGAV-LKLIDLGXXX--------XXXXXXLPDLEFASPEMLTSPATAG 271
H+D++PENIL+N + +++ D G + ++ SPE+LT +A
Sbjct: 151 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE-KSAC 209
Query: 272 PSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQL 331
S+D+W+LG ++Y L++G+ PF +E I +Y FP + AR+L+ +L
Sbjct: 210 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDLVEKL 265
Query: 332 LNTHADKR 339
L A KR
Sbjct: 266 LVLDATKR 273
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 122/248 (49%), Gaps = 27/248 (10%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQITRAEYNLLSTLMHAHIPTAL 162
LG G F TV AR+ T + A+K I +E + +TR E +++S L H
Sbjct: 18 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHPFFVKLY 76
Query: 163 ALFENAPVPGTDTIVMQLVHGES--LIQHLCRQSTITESYICCIIRQLHSALHCLHSQQI 220
F++ + + L + ++ L++++ + + E+ ++ SAL LH + I
Sbjct: 77 FTFQD-----DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 131
Query: 221 AHKDIRPENILMNGAV-LKLIDLGXXX--------XXXXXXLPDLEFASPEMLTSPATAG 271
H+D++PENIL+N + +++ D G + ++ SPE+LT +A
Sbjct: 132 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE-KSAC 190
Query: 272 PSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQL 331
S+D+W+LG ++Y L++G+ PF +E I +Y FP + AR+L+ +L
Sbjct: 191 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDLVEKL 246
Query: 332 LNTHADKR 339
L A KR
Sbjct: 247 LVLDATKR 254
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 122/248 (49%), Gaps = 27/248 (10%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQITRAEYNLLSTLMHAHIPTAL 162
LG G F TV AR+ T + A+K I +E + +TR E +++S L H
Sbjct: 16 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHPFFVKLY 74
Query: 163 ALFENAPVPGTDTIVMQLVHGES--LIQHLCRQSTITESYICCIIRQLHSALHCLHSQQI 220
F++ + + L + ++ L++++ + + E+ ++ SAL LH + I
Sbjct: 75 FTFQD-----DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 129
Query: 221 AHKDIRPENILMNGAV-LKLIDLGXXX--------XXXXXXLPDLEFASPEMLTSPATAG 271
H+D++PENIL+N + +++ D G + ++ SPE+LT +A
Sbjct: 130 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE-KSAC 188
Query: 272 PSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQL 331
S+D+W+LG ++Y L++G+ PF +E I +Y FP + AR+L+ +L
Sbjct: 189 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDLVEKL 244
Query: 332 LNTHADKR 339
L A KR
Sbjct: 245 LVLDATKR 252
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 122/248 (49%), Gaps = 27/248 (10%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQITRAEYNLLSTLMHAHIPTAL 162
LG G F TV AR+ T + A+K I +E + +TR E +++S L H
Sbjct: 17 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHPFFVKLY 75
Query: 163 ALFENAPVPGTDTIVMQLVHGES--LIQHLCRQSTITESYICCIIRQLHSALHCLHSQQI 220
F++ + + L + ++ L++++ + + E+ ++ SAL LH + I
Sbjct: 76 FTFQD-----DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 130
Query: 221 AHKDIRPENILMNGAV-LKLIDLGXXX--------XXXXXXLPDLEFASPEMLTSPATAG 271
H+D++PENIL+N + +++ D G + ++ SPE+LT +A
Sbjct: 131 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE-KSAC 189
Query: 272 PSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQL 331
S+D+W+LG ++Y L++G+ PF +E I +Y FP + AR+L+ +L
Sbjct: 190 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDLVEKL 245
Query: 332 LNTHADKR 339
L A KR
Sbjct: 246 LVLDATKR 253
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 122/248 (49%), Gaps = 27/248 (10%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQITRAEYNLLSTLMHAHIPTAL 162
LG G F TV AR+ T + A+K I +E + +TR E +++S L H
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHPFFVKLY 95
Query: 163 ALFENAPVPGTDTIVMQLVHGES--LIQHLCRQSTITESYICCIIRQLHSALHCLHSQQI 220
F++ + + L + ++ L++++ + + E+ ++ SAL LH + I
Sbjct: 96 FTFQD-----DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 150
Query: 221 AHKDIRPENILMNGAV-LKLIDLGXXX--------XXXXXXLPDLEFASPEMLTSPATAG 271
H+D++PENIL+N + +++ D G + ++ SPE+LT +A
Sbjct: 151 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE-KSAC 209
Query: 272 PSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQL 331
S+D+W+LG ++Y L++G+ PF +E I +Y FP + AR+L+ +L
Sbjct: 210 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDLVEKL 265
Query: 332 LNTHADKR 339
L A KR
Sbjct: 266 LVLDATKR 273
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 122/248 (49%), Gaps = 27/248 (10%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQITRAEYNLLSTLMHAHIPTAL 162
LG G F TV AR+ T + A+K I +E + +TR E +++S L H
Sbjct: 15 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHPFFVKLY 73
Query: 163 ALFENAPVPGTDTIVMQLVHGES--LIQHLCRQSTITESYICCIIRQLHSALHCLHSQQI 220
F++ + + L + ++ L++++ + + E+ ++ SAL LH + I
Sbjct: 74 FTFQD-----DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 128
Query: 221 AHKDIRPENILMNGAV-LKLIDLGXXX--------XXXXXXLPDLEFASPEMLTSPATAG 271
H+D++PENIL+N + +++ D G + ++ SPE+LT +A
Sbjct: 129 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE-KSAC 187
Query: 272 PSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQL 331
S+D+W+LG ++Y L++G+ PF +E I +Y FP + AR+L+ +L
Sbjct: 188 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDLVEKL 243
Query: 332 LNTHADKR 339
L A KR
Sbjct: 244 LVLDATKR 251
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 122/248 (49%), Gaps = 27/248 (10%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQITRAEYNLLSTLMHAHIPTAL 162
LG G F TV AR+ T + A+K I +E + +TR E +++S L H
Sbjct: 22 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHPFFVKLY 80
Query: 163 ALFENAPVPGTDTIVMQLVHGES--LIQHLCRQSTITESYICCIIRQLHSALHCLHSQQI 220
F++ + + L + ++ L++++ + + E+ ++ SAL LH + I
Sbjct: 81 FTFQD-----DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 135
Query: 221 AHKDIRPENILMNGAV-LKLIDLGXXX--------XXXXXXLPDLEFASPEMLTSPATAG 271
H+D++PENIL+N + +++ D G + ++ SPE+LT +A
Sbjct: 136 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE-KSAC 194
Query: 272 PSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQL 331
S+D+W+LG ++Y L++G+ PF +E I +Y FP + AR+L+ +L
Sbjct: 195 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDLVEKL 250
Query: 332 LNTHADKR 339
L A KR
Sbjct: 251 LVLDATKR 258
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 121/248 (48%), Gaps = 27/248 (10%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQITRAEYNLLSTLMHAHIPTAL 162
LG G F TV AR+ T + A+K I +E + +TR E +++S L H
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHPFFVKLY 99
Query: 163 ALFENAPVPGTDTIVMQLVHGES--LIQHLCRQSTITESYICCIIRQLHSALHCLHSQQI 220
F++ + + L + ++ L++++ + + E+ ++ SAL LH + I
Sbjct: 100 FTFQD-----DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 154
Query: 221 AHKDIRPENILMNGAV-LKLIDLGXXX--------XXXXXXLPDLEFASPEMLTSPATAG 271
H+D++PENIL+N + +++ D G + ++ SPE+LT +A
Sbjct: 155 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTE-KSAC 213
Query: 272 PSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQL 331
S+D+W+LG ++Y L++G+ PF +E I +Y FP + AR+L+ +L
Sbjct: 214 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDLVEKL 269
Query: 332 LNTHADKR 339
L A KR
Sbjct: 270 LVLDATKR 277
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 121/248 (48%), Gaps = 27/248 (10%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQITRAEYNLLSTLMHAHIPTAL 162
LG G F TV AR+ T + A+K I +E + +TR E +++S L H
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHPFFVKLY 96
Query: 163 ALFENAPVPGTDTIVMQLVHGES--LIQHLCRQSTITESYICCIIRQLHSALHCLHSQQI 220
F++ + + L + ++ L++++ + + E+ ++ SAL LH + I
Sbjct: 97 FTFQD-----DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 221 AHKDIRPENILMNGAV-LKLIDLGXXX--------XXXXXXLPDLEFASPEMLTSPATAG 271
H+D++PENIL+N + +++ D G + ++ SPE+LT +A
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTE-KSAC 210
Query: 272 PSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQL 331
S+D+W+LG ++Y L++G+ PF +E I +Y FP + AR+L+ +L
Sbjct: 211 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDLVEKL 266
Query: 332 LNTHADKR 339
L A KR
Sbjct: 267 LVLDATKR 274
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 122/248 (49%), Gaps = 27/248 (10%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQITRAEYNLLSTLMHAHIPTAL 162
LG G F TV AR+ T + A+K I +E + +TR E +++S L H
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHPFFVKLY 96
Query: 163 ALFENAPVPGTDTIVMQLVHGES--LIQHLCRQSTITESYICCIIRQLHSALHCLHSQQI 220
F++ + + L + ++ L++++ + + E+ ++ SAL LH + I
Sbjct: 97 FTFQD-----DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 221 AHKDIRPENILMNGAV-LKLIDLGXXX--------XXXXXXLPDLEFASPEMLTSPATAG 271
H+D++PENIL+N + +++ D G + ++ SPE+LT +A
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE-KSAC 210
Query: 272 PSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQL 331
S+D+W+LG ++Y L++G+ PF +E I +Y FP + AR+L+ +L
Sbjct: 211 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDLVEKL 266
Query: 332 LNTHADKR 339
L A KR
Sbjct: 267 LVLDATKR 274
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 122/248 (49%), Gaps = 27/248 (10%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQITRAEYNLLSTLMHAHIPTAL 162
LG G F TV AR+ T + A+K I +E + +TR E +++S L H
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHPFFVKLY 96
Query: 163 ALFENAPVPGTDTIVMQLVHGES--LIQHLCRQSTITESYICCIIRQLHSALHCLHSQQI 220
F++ + + L + ++ L++++ + + E+ ++ SAL LH + I
Sbjct: 97 FTFQD-----DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 221 AHKDIRPENILMNGAV-LKLIDLGXXX--------XXXXXXLPDLEFASPEMLTSPATAG 271
H+D++PENIL+N + +++ D G + ++ SPE+LT +A
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE-KSAC 210
Query: 272 PSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQL 331
S+D+W+LG ++Y L++G+ PF +E I +Y FP + AR+L+ +L
Sbjct: 211 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDLVEKL 266
Query: 332 LNTHADKR 339
L A KR
Sbjct: 267 LVLDATKR 274
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 122/248 (49%), Gaps = 27/248 (10%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQITRAEYNLLSTLMHAHIPTAL 162
LG G F TV AR+ T + A+K I +E + +TR E +++S L H
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHPFFVKLY 98
Query: 163 ALFENAPVPGTDTIVMQLVHGES--LIQHLCRQSTITESYICCIIRQLHSALHCLHSQQI 220
F++ + + L + ++ L++++ + + E+ ++ SAL LH + I
Sbjct: 99 FTFQD-----DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 221 AHKDIRPENILMNGAV-LKLIDLGXXX--------XXXXXXLPDLEFASPEMLTSPATAG 271
H+D++PENIL+N + +++ D G + ++ SPE+LT +A
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE-KSAC 212
Query: 272 PSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQL 331
S+D+W+LG ++Y L++G+ PF +E I +Y FP + AR+L+ +L
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDLVEKL 268
Query: 332 LNTHADKR 339
L A KR
Sbjct: 269 LVLDATKR 276
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 122/248 (49%), Gaps = 27/248 (10%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQITRAEYNLLSTLMHAHIPTAL 162
LG G F TV AR+ T + A+K I +E + +TR E +++S L H
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHPFFVKLY 99
Query: 163 ALFENAPVPGTDTIVMQLVHGES--LIQHLCRQSTITESYICCIIRQLHSALHCLHSQQI 220
F++ + + L + ++ L++++ + + E+ ++ SAL LH + I
Sbjct: 100 FTFQD-----DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 154
Query: 221 AHKDIRPENILMNGAV-LKLIDLGXXX--------XXXXXXLPDLEFASPEMLTSPATAG 271
H+D++PENIL+N + +++ D G + ++ SPE+LT +A
Sbjct: 155 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE-KSAC 213
Query: 272 PSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQL 331
S+D+W+LG ++Y L++G+ PF +E I +Y FP + AR+L+ +L
Sbjct: 214 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDLVEKL 269
Query: 332 LNTHADKR 339
L A KR
Sbjct: 270 LVLDATKR 277
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 122/248 (49%), Gaps = 27/248 (10%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQITRAEYNLLSTLMHAHIPTAL 162
LG G F TV AR+ T + A+K I +E + +TR E +++S L H
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHPFFVKLY 98
Query: 163 ALFENAPVPGTDTIVMQLVHGES--LIQHLCRQSTITESYICCIIRQLHSALHCLHSQQI 220
F++ + + L + ++ L++++ + + E+ ++ SAL LH + I
Sbjct: 99 FTFQD-----DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 221 AHKDIRPENILMNGAV-LKLIDLGXXX--------XXXXXXLPDLEFASPEMLTSPATAG 271
H+D++PENIL+N + +++ D G + ++ SPE+LT +A
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE-KSAC 212
Query: 272 PSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQL 331
S+D+W+LG ++Y L++G+ PF +E I +Y FP + AR+L+ +L
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDLVEKL 268
Query: 332 LNTHADKR 339
L A KR
Sbjct: 269 LVLDATKR 276
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 122/248 (49%), Gaps = 27/248 (10%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQITRAEYNLLSTLMHAHIPTAL 162
LG G F TV AR+ T + A+K I +E + +TR E +++S L H
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHPFFVKLY 98
Query: 163 ALFENAPVPGTDTIVMQLVHGES--LIQHLCRQSTITESYICCIIRQLHSALHCLHSQQI 220
F++ + + L + ++ L++++ + + E+ ++ SAL LH + I
Sbjct: 99 FTFQD-----DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 153
Query: 221 AHKDIRPENILMNGAV-LKLIDLGXXX--------XXXXXXLPDLEFASPEMLTSPATAG 271
H+D++PENIL+N + +++ D G + ++ SPE+LT +A
Sbjct: 154 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE-KSAC 212
Query: 272 PSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQL 331
S+D+W+LG ++Y L++G+ PF +E I +Y FP + AR+L+ +L
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDLVEKL 268
Query: 332 LNTHADKR 339
L A KR
Sbjct: 269 LVLDATKR 276
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 122/248 (49%), Gaps = 27/248 (10%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQITRAEYNLLSTLMHAHIPTAL 162
LG G F TV AR+ T + A+K I +E + +TR E +++S L H
Sbjct: 45 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHPFFVKLY 103
Query: 163 ALFENAPVPGTDTIVMQLVHGES--LIQHLCRQSTITESYICCIIRQLHSALHCLHSQQI 220
F++ + + L + ++ L++++ + + E+ ++ SAL LH + I
Sbjct: 104 FCFQD-----DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 158
Query: 221 AHKDIRPENILMNGAV-LKLIDLGXXX--------XXXXXXLPDLEFASPEMLTSPATAG 271
H+D++PENIL+N + +++ D G + ++ SPE+LT +A
Sbjct: 159 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE-KSAC 217
Query: 272 PSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQL 331
S+D+W+LG ++Y L++G+ PF +E I +Y FP + AR+L+ +L
Sbjct: 218 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDLVEKL 273
Query: 332 LNTHADKR 339
L A KR
Sbjct: 274 LVLDATKR 281
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 93/215 (43%), Gaps = 30/215 (13%)
Query: 176 IVMQLVHGESLIQHLCRQS--TITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILMN 233
IVM+ + G L + + TE I++ + A+ LHS IAH+D++PEN+L
Sbjct: 92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYT 151
Query: 234 ----GAVLKLIDLGXXXXXXXXXLPDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLSG 289
A+LKL D G FA T+ S DMWSLGV++YILL G
Sbjct: 152 SKRPNAILKLTDFG--------------FAKE---TTGEKYDKSCDMWSLGVIMYILLCG 194
Query: 290 VSPFLDES----EEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQL 345
PF + I + Y FP + +S + LI LL T +R T +
Sbjct: 195 YPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEF 254
Query: 346 LQVAWFAEASC---SEFDTERLLPFSARRKQKFKE 377
+ W +++ + T R+L R + KE
Sbjct: 255 MNHPWIMQSTKVPQTPLHTSRVLKEDKERWEDVKE 289
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 121/248 (48%), Gaps = 27/248 (10%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQITRAEYNLLSTLMHAHIPTAL 162
LG G F TV AR+ T + A+K I +E + +TR E +++S L H
Sbjct: 43 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHPFFVKLY 101
Query: 163 ALFENAPVPGTDTIVMQLVHGES--LIQHLCRQSTITESYICCIIRQLHSALHCLHSQQI 220
F++ + + L + ++ L++++ + + E+ ++ SAL LH + I
Sbjct: 102 FTFQD-----DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 156
Query: 221 AHKDIRPENILMNGAV-LKLIDLGXXX--------XXXXXXLPDLEFASPEMLTSPATAG 271
H+D++PENIL+N + +++ D G + ++ SPE+LT +A
Sbjct: 157 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE-KSAC 215
Query: 272 PSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQL 331
S+D+W+LG ++Y L++G+ PF +E I +Y FP AR+L+ +L
Sbjct: 216 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----AAFFPKARDLVEKL 271
Query: 332 LNTHADKR 339
L A KR
Sbjct: 272 LVLDATKR 279
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 116/274 (42%), Gaps = 29/274 (10%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQITRAEYNLLSTLMHAHIPTAL 162
LG G+F V AR++ + +VALK QI +E Q+ R + H H P L
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRRE----IEIQAHLHHPNIL 86
Query: 163 ALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQIAH 222
L+ ++++ L + L + T E I+ +L AL H +++ H
Sbjct: 87 RLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGKKVIH 146
Query: 223 KDIRPENILMNGAVLKLI-DLG----XXXXXXXXXLPDLEFASPEMLTSPATAGPSTDMW 277
+DI+PEN+L+ I D G L++ PEM+ D+W
Sbjct: 147 RDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMCGTLDYLPPEMIEG-RMHNEKVDLW 205
Query: 278 SLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVP--ARELIGQLLNTH 335
+GVL Y LL G PF S ET I D FP SVP A++LI +LL +
Sbjct: 206 CIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPA------SVPTGAQDLISKLLRHN 259
Query: 336 ADKRPTAGQLLQVAWFAEASCSEFDTERLLPFSA 369
+R Q+ W ++ R+LP SA
Sbjct: 260 PSERLPLAQVSAHPWVRA------NSRRVLPPSA 287
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 121/248 (48%), Gaps = 27/248 (10%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQITRAEYNLLSTLMHAHIPTAL 162
LG G F T AR+ T + A+K I +E + +TR E +++S L H
Sbjct: 38 LGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTR-ERDVMSRLDHPFFVKLY 96
Query: 163 ALFENAPVPGTDTIVMQLVHGES--LIQHLCRQSTITESYICCIIRQLHSALHCLHSQQI 220
F++ + + L + ++ L++++ + + E+ ++ SAL LH + I
Sbjct: 97 FTFQD-----DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGI 151
Query: 221 AHKDIRPENILMNGAV-LKLIDLGXXX--------XXXXXXLPDLEFASPEMLTSPATAG 271
H+D++PENIL+N + +++ D G + ++ SPE+LT +A
Sbjct: 152 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTE-KSAC 210
Query: 272 PSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQL 331
S+D+W+LG ++Y L++G+ PF +E I +Y FP + AR+L+ +L
Sbjct: 211 KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEK----FFPKARDLVEKL 266
Query: 332 LNTHADKR 339
L A KR
Sbjct: 267 LVLDATKR 274
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 114/258 (44%), Gaps = 19/258 (7%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRA--EYNLLSTLMHAHIPTALA 163
LG G F + D T ++ A K +P+ +P Q + E ++ +L H H+
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 164 LFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQIAHK 223
FE+ +V++L SL++ R+ +TE +RQ+ LH ++ H+
Sbjct: 107 FFEDNDFV---FVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR 163
Query: 224 DIRPENILMNGAV-LKLIDLGXXXXX------XXXXLPDLEFASPEMLTSPATAGPSTDM 276
D++ N+ +N + +K+ D G + +PE+L+ + D+
Sbjct: 164 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSF-EVDV 222
Query: 277 WSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHA 336
WS+G ++Y LL G PF +ET I +YS P HI+ A LI ++L T
Sbjct: 223 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP----KHINPVAASLIQKMLQTDP 278
Query: 337 DKRPTAGQLLQVAWFAEA 354
RPT +LL +F
Sbjct: 279 TARPTINELLNDEFFTSG 296
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 114/258 (44%), Gaps = 19/258 (7%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRA--EYNLLSTLMHAHIPTALA 163
LG G F + D T ++ A K +P+ +P Q + E ++ +L H H+
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 164 LFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQIAHK 223
FE+ +V++L SL++ R+ +TE +RQ+ LH ++ H+
Sbjct: 89 FFEDNDF---VFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR 145
Query: 224 DIRPENILMNGAV-LKLIDLGXXXXX------XXXXLPDLEFASPEMLTSPATAGPSTDM 276
D++ N+ +N + +K+ D G + +PE+L+ + D+
Sbjct: 146 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSF-EVDV 204
Query: 277 WSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHA 336
WS+G ++Y LL G PF +ET I +YS P HI+ A LI ++L T
Sbjct: 205 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP----KHINPVAASLIQKMLQTDP 260
Query: 337 DKRPTAGQLLQVAWFAEA 354
RPT +LL +F
Sbjct: 261 TARPTINELLNDEFFTSG 278
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 114/258 (44%), Gaps = 19/258 (7%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRA--EYNLLSTLMHAHIPTALA 163
LG G F + D T ++ A K +P+ +P Q + E ++ +L H H+
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 164 LFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQIAHK 223
FE+ +V++L SL++ R+ +TE +RQ+ LH ++ H+
Sbjct: 109 FFEDNDF---VFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR 165
Query: 224 DIRPENILMNGAV-LKLIDLGXXXXX------XXXXLPDLEFASPEMLTSPATAGPSTDM 276
D++ N+ +N + +K+ D G + +PE+L+ + D+
Sbjct: 166 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSF-EVDV 224
Query: 277 WSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHA 336
WS+G ++Y LL G PF +ET I +YS P HI+ A LI ++L T
Sbjct: 225 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP----KHINPVAASLIQKMLQTDP 280
Query: 337 DKRPTAGQLLQVAWFAEA 354
RPT +LL +F
Sbjct: 281 TARPTINELLNDEFFTSG 298
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 114/258 (44%), Gaps = 19/258 (7%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRA--EYNLLSTLMHAHIPTALA 163
LG G F + D T ++ A K +P+ +P Q + E ++ +L H H+
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 164 LFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQIAHK 223
FE+ +V++L SL++ R+ +TE +RQ+ LH ++ H+
Sbjct: 85 FFEDNDFV---FVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR 141
Query: 224 DIRPENILMNGAV-LKLIDLGXXXXX------XXXXLPDLEFASPEMLTSPATAGPSTDM 276
D++ N+ +N + +K+ D G + +PE+L+ + D+
Sbjct: 142 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSF-EVDV 200
Query: 277 WSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHA 336
WS+G ++Y LL G PF +ET I +YS P HI+ A LI ++L T
Sbjct: 201 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP----KHINPVAASLIQKMLQTDP 256
Query: 337 DKRPTAGQLLQVAWFAEA 354
RPT +LL +F
Sbjct: 257 TARPTINELLNDEFFTSG 274
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 114/258 (44%), Gaps = 19/258 (7%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRA--EYNLLSTLMHAHIPTALA 163
LG G F + D T ++ A K +P+ +P Q + E ++ +L H H+
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 164 LFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQIAHK 223
FE+ +V++L SL++ R+ +TE +RQ+ LH ++ H+
Sbjct: 83 FFEDNDFV---FVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR 139
Query: 224 DIRPENILMNGAV-LKLIDLGXXXXX------XXXXLPDLEFASPEMLTSPATAGPSTDM 276
D++ N+ +N + +K+ D G + +PE+L+ + D+
Sbjct: 140 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSF-EVDV 198
Query: 277 WSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHA 336
WS+G ++Y LL G PF +ET I +YS P HI+ A LI ++L T
Sbjct: 199 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP----KHINPVAASLIQKMLQTDP 254
Query: 337 DKRPTAGQLLQVAWFAEA 354
RPT +LL +F
Sbjct: 255 TARPTINELLNDEFFTSG 272
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 114/258 (44%), Gaps = 19/258 (7%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRA--EYNLLSTLMHAHIPTALA 163
LG G F + D T ++ A K +P+ +P Q + E ++ +L H H+
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 164 LFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQIAHK 223
FE+ +V++L SL++ R+ +TE +RQ+ LH ++ H+
Sbjct: 85 FFEDNDFV---FVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR 141
Query: 224 DIRPENILMNGAV-LKLIDLGXXXXX------XXXXLPDLEFASPEMLTSPATAGPSTDM 276
D++ N+ +N + +K+ D G + +PE+L+ + D+
Sbjct: 142 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSF-EVDV 200
Query: 277 WSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHA 336
WS+G ++Y LL G PF +ET I +YS P HI+ A LI ++L T
Sbjct: 201 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP----KHINPVAASLIQKMLQTDP 256
Query: 337 DKRPTAGQLLQVAWFAEA 354
RPT +LL +F
Sbjct: 257 TARPTINELLNDEFFTSG 274
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 117/265 (44%), Gaps = 19/265 (7%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITR--AEYNLLSTLMHA 156
RY LG G F + D T ++ A K +P+ +P Q + E + +L +
Sbjct: 27 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNP 86
Query: 157 HIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLH 216
H+ FE+ +V+++ SL++ R+ +TE +RQ + LH
Sbjct: 87 HVVGFHGFFEDDDFV---YVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLH 143
Query: 217 SQQIAHKDIRPENILMNGAV-LKLIDLGXXXXXXX--XXLPDL----EFASPEMLTSPAT 269
+ ++ H+D++ N+ +N + +K+ D G DL + +PE+L
Sbjct: 144 NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGH 203
Query: 270 AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIG 329
+ D+WSLG +LY LL G PF +ET I +YS P HI+ A LI
Sbjct: 204 SF-EVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVP----RHINPVASALIR 258
Query: 330 QLLNTHADKRPTAGQLLQVAWFAEA 354
++L+ RP+ +LL +F
Sbjct: 259 RMLHADPTLRPSVAELLTDEFFTSG 283
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 117/265 (44%), Gaps = 19/265 (7%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITR--AEYNLLSTLMHA 156
RY LG G F + D T ++ A K +P+ +P Q + E + +L +
Sbjct: 43 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNP 102
Query: 157 HIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLH 216
H+ FE+ +V+++ SL++ R+ +TE +RQ + LH
Sbjct: 103 HVVGFHGFFEDDDFV---YVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLH 159
Query: 217 SQQIAHKDIRPENILMNGAV-LKLIDLGXXXXXXX--XXLPDL----EFASPEMLTSPAT 269
+ ++ H+D++ N+ +N + +K+ D G DL + +PE+L
Sbjct: 160 NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGH 219
Query: 270 AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIG 329
+ D+WSLG +LY LL G PF +ET I +YS P HI+ A LI
Sbjct: 220 SF-EVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVP----RHINPVASALIR 274
Query: 330 QLLNTHADKRPTAGQLLQVAWFAEA 354
++L+ RP+ +LL +F
Sbjct: 275 RMLHADPTLRPSVAELLTDEFFTSG 299
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 21/204 (10%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQ-IPRERQP--QQITRAEYNLLSTLMHAH 157
+YE++ ++G G + V K R+R TGQ+VA+K+ + E P ++I E +L L H +
Sbjct: 4 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPN 63
Query: 158 IPTALALFENAPVPGTDTIVMQLVH---GESLIQHLCR-QSTITESYICCIIRQLHSALH 213
+ L +F + LV +++ L R Q + E + I Q A++
Sbjct: 64 LVNLLEVFRRKR-------RLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVN 116
Query: 214 CLHSQQIAHKDIRPENILMNG-AVLKLIDLGXXXXXXX-XXLPDLEFA-----SPEMLTS 266
H H+D++PENIL+ +V+KL D G D E A SPE+L
Sbjct: 117 FCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVG 176
Query: 267 PATAGPSTDMWSLGVLLYILLSGV 290
GP D+W++G + LLSGV
Sbjct: 177 DTQYGPPVDVWAIGCVFAELLSGV 200
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 121/270 (44%), Gaps = 28/270 (10%)
Query: 85 YTVPFETRWQQEQFEHR--YEELERLGNGRFCTVRKARDRGTGQLVALKQIPR----ERQ 138
+ PF ++ +Q + HR +E L+ +G G F V + + ++ A+K + + +R
Sbjct: 58 WAKPFTSKVKQMRL-HREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRA 116
Query: 139 PQQITRAEYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR-QSTIT 197
R E ++L I T F++ +VM G L+ L + + +
Sbjct: 117 ETACFREERDVLVNGDSKWITTLHYAFQD---DNNLYLVMDYYVGGDLLTLLSKFEDRLP 173
Query: 198 ESYICCIIRQLHSALHCLHSQQIAHKDIRPENILMN----------GAVLKLIDLGXXXX 247
E + ++ A+ +H H+DI+P+NILM+ G+ LKL++ G
Sbjct: 174 EEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQS 233
Query: 248 XXXXXLPDLEFASPEMLTS----PATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRA 303
PD + SPE+L + GP D WSLGV +Y +L G +PF ES ET
Sbjct: 234 SVAVGTPD--YISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYG 291
Query: 304 HISVADYSFP-PEQCGHISVPARELIGQLL 332
I F P Q +S A++LI +L+
Sbjct: 292 KIMNHKERFQFPTQVTDVSENAKDLIRRLI 321
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 123/281 (43%), Gaps = 24/281 (8%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRE----RQPQQITRAEYNLLSTLMHAH 157
++ L+ LG G F V R++ TG+ A+K + +E + T E +L H
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH-- 64
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHS 217
P AL VM+ +G L HL R+ TE ++ SAL LHS
Sbjct: 65 -PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 218 QQIAHKDIRPENILMN-GAVLKLIDLG------XXXXXXXXXLPDLEFASPEMLTSPATA 270
+ + ++DI+ EN++++ +K+ D G E+ +PE+L
Sbjct: 124 RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLED-NDY 182
Query: 271 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 330
G + D W LGV++Y ++ G PF ++ E I + + FP +S A+ L+
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT----LSPEAKSLLAG 238
Query: 331 LLNTHADKRPTAG-----QLLQVAWFAEASCSEFDTERLLP 366
LL +R G ++++ +F + + ++LLP
Sbjct: 239 LLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLP 279
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 122/281 (43%), Gaps = 24/281 (8%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRE----RQPQQITRAEYNLLSTLMHAH 157
++ L+ LG G F V R++ TG+ A+K + +E + T E +L H
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH-- 64
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHS 217
P AL VM+ +G L HL R+ TE ++ SAL LHS
Sbjct: 65 -PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 218 QQIAHKDIRPENILMN-GAVLKLIDLG------XXXXXXXXXLPDLEFASPEMLTSPATA 270
+ + ++DI+ EN++++ +K+ D G E+ +PE+L
Sbjct: 124 RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLED-NDY 182
Query: 271 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 330
G + D W LGV++Y ++ G PF ++ E I + + FP +S A+ L+
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT----LSPEAKSLLAG 238
Query: 331 LLNTHADKRPTAG-----QLLQVAWFAEASCSEFDTERLLP 366
LL +R G ++++ +F + + ++LLP
Sbjct: 239 LLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLP 279
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 122/281 (43%), Gaps = 24/281 (8%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRE----RQPQQITRAEYNLLSTLMHAH 157
++ L+ LG G F V R++ TG+ A+K + +E + T E +L H
Sbjct: 10 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH-- 67
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHS 217
P AL VM+ +G L HL R+ TE ++ SAL LHS
Sbjct: 68 -PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 126
Query: 218 QQIAHKDIRPENILMN-GAVLKLIDLG------XXXXXXXXXLPDLEFASPEMLTSPATA 270
+ + ++DI+ EN++++ +K+ D G E+ +PE+L
Sbjct: 127 RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLED-NDY 185
Query: 271 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 330
G + D W LGV++Y ++ G PF ++ E I + + FP +S A+ L+
Sbjct: 186 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT----LSPEAKSLLAG 241
Query: 331 LLNTHADKRPTAG-----QLLQVAWFAEASCSEFDTERLLP 366
LL +R G ++++ +F + + ++LLP
Sbjct: 242 LLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLP 282
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 122/281 (43%), Gaps = 24/281 (8%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRE----RQPQQITRAEYNLLSTLMHAH 157
++ L+ LG G F V R++ TG+ A+K + +E + T E +L H
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH-- 64
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHS 217
P AL VM+ +G L HL R+ TE ++ SAL LHS
Sbjct: 65 -PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 218 QQIAHKDIRPENILMN-GAVLKLIDLG------XXXXXXXXXLPDLEFASPEMLTSPATA 270
+ + ++DI+ EN++++ +K+ D G E+ +PE+L
Sbjct: 124 RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLED-NDY 182
Query: 271 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 330
G + D W LGV++Y ++ G PF ++ E I + + FP +S A+ L+
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT----LSPEAKSLLAG 238
Query: 331 LLNTHADKRPTAG-----QLLQVAWFAEASCSEFDTERLLP 366
LL +R G ++++ +F + + ++LLP
Sbjct: 239 LLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLP 279
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 115/265 (43%), Gaps = 19/265 (7%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITR--AEYNLLSTLMHA 156
RY LG G F + D T ++ A K +P+ +P Q + E + +L +
Sbjct: 43 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNP 102
Query: 157 HIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLH 216
H+ FE+ +V+++ SL++ R+ +TE +RQ + LH
Sbjct: 103 HVVGFHGFFEDDDFV---YVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLH 159
Query: 217 SQQIAHKDIRPENILMNGAV-LKLIDLGXXXX------XXXXXLPDLEFASPEMLTSPAT 269
+ ++ H+D++ N+ +N + +K+ D G + +PE+L
Sbjct: 160 NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGH 219
Query: 270 AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIG 329
+ D+WSLG +LY LL G PF +ET I +YS P HI+ A LI
Sbjct: 220 SF-EVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVP----RHINPVASALIR 274
Query: 330 QLLNTHADKRPTAGQLLQVAWFAEA 354
++L+ RP+ +LL +F
Sbjct: 275 RMLHADPTLRPSVAELLTDEFFTSG 299
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 123/281 (43%), Gaps = 24/281 (8%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRE----RQPQQITRAEYNLLSTLMHAH 157
++ L+ LG G F V R++ TG+ A+K + +E + T E +L H
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH-- 64
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHS 217
P AL VM+ +G L HL R+ TE ++ SAL LHS
Sbjct: 65 -PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 218 QQIAHKDIRPENILMN-GAVLKLIDLG------XXXXXXXXXLPDLEFASPEMLTSPATA 270
+ + ++DI+ EN++++ +K+ D G E+ +PE+L
Sbjct: 124 RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLED-NDY 182
Query: 271 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 330
G + D W LGV++Y ++ G PF ++ E I + + FP +S A+ L+
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT----LSPEAKSLLAG 238
Query: 331 LLNTHADKRPTAG-----QLLQVAWFAEASCSEFDTERLLP 366
LL +R G ++++ +F + + ++LLP
Sbjct: 239 LLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLP 279
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 116/265 (43%), Gaps = 19/265 (7%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITR--AEYNLLSTLMHA 156
RY LG G F + D T ++ A K +P+ +P Q + E + +L +
Sbjct: 43 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNP 102
Query: 157 HIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLH 216
H+ FE+ +V+++ SL++ R+ +TE +RQ + LH
Sbjct: 103 HVVGFHGFFEDDDFV---YVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLH 159
Query: 217 SQQIAHKDIRPENILMNGAV-LKLIDLGXXXX------XXXXXLPDLEFASPEMLTSPAT 269
+ ++ H+D++ N+ +N + +K+ D G + +PE+L
Sbjct: 160 NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGH 219
Query: 270 AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIG 329
+ D+WSLG +LY LL G PF +ET I +YS P HI+ A LI
Sbjct: 220 SF-EVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVP----RHINPVASALIR 274
Query: 330 QLLNTHADKRPTAGQLLQVAWFAEA 354
++L+ RP+ +LL +F
Sbjct: 275 RMLHADPTLRPSVAELLTDEFFTSG 299
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 123/281 (43%), Gaps = 24/281 (8%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRE----RQPQQITRAEYNLLSTLMHAH 157
++ L+ LG G F V R++ TG+ A+K + +E + T E +L H
Sbjct: 12 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH-- 69
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHS 217
P AL VM+ +G L HL R+ TE ++ SAL LHS
Sbjct: 70 -PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 128
Query: 218 QQIAHKDIRPENILMN-GAVLKLIDLG------XXXXXXXXXLPDLEFASPEMLTSPATA 270
+ + ++DI+ EN++++ +K+ D G E+ +PE+L
Sbjct: 129 RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLED-NDY 187
Query: 271 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 330
G + D W LGV++Y ++ G PF ++ E I + + FP +S A+ L+
Sbjct: 188 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT----LSPEAKSLLAG 243
Query: 331 LLNTHADKRPTAG-----QLLQVAWFAEASCSEFDTERLLP 366
LL +R G ++++ +F + + ++LLP
Sbjct: 244 LLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLP 284
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 123/281 (43%), Gaps = 24/281 (8%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRE----RQPQQITRAEYNLLSTLMHAH 157
++ L+ LG G F V R++ TG+ A+K + +E + T E +L H
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH-- 64
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHS 217
P AL VM+ +G L HL R+ TE ++ SAL LHS
Sbjct: 65 -PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 218 QQIAHKDIRPENILMN-GAVLKLIDLG------XXXXXXXXXLPDLEFASPEMLTSPATA 270
+ + ++DI+ EN++++ +K+ D G E+ +PE+L
Sbjct: 124 RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLED-NDY 182
Query: 271 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 330
G + D W LGV++Y ++ G PF ++ E I + + FP +S A+ L+
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT----LSPEAKSLLAG 238
Query: 331 LLNTHADKRPTAG-----QLLQVAWFAEASCSEFDTERLLP 366
LL +R G ++++ +F + + ++LLP
Sbjct: 239 LLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLP 279
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 91/220 (41%), Gaps = 19/220 (8%)
Query: 176 IVMQLVHGESLIQHLCRQS--TITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILMN 233
IV + + G L + + TE I + + A+ LHS IAH+D++PEN+L
Sbjct: 136 IVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHRDVKPENLLYT 195
Query: 234 ----GAVLKLIDLGXXXXXX---XXXLPDLE--FASPEMLTSPATAGPSTDMWSLGVLLY 284
A+LKL D G P + +PE+L P S D WSLGV+ Y
Sbjct: 196 SKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL-GPEKYDKSCDXWSLGVIXY 254
Query: 285 ILLSGVSPFLDES----EEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRP 340
ILL G PF + I Y FP + +S + LI LL T +R
Sbjct: 255 ILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPNPEWSEVSEEVKXLIRNLLKTEPTQRX 314
Query: 341 TAGQLLQVAWFAEASC---SEFDTERLLPFSARRKQKFKE 377
T + W +++ + T R+L R + KE
Sbjct: 315 TITEFXNHPWIXQSTKVPQTPLHTSRVLKEDKERWEDVKE 354
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 104/223 (46%), Gaps = 14/223 (6%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQ----QITRAEYNLLSTLMHAH 157
+E + LG G F V AR + TG L A+K + ++ Q + T E +LS L H
Sbjct: 25 FEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILS-LARNH 83
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHS 217
P LF P VM+ V+G L+ H+ + E+ ++ SAL LH
Sbjct: 84 -PFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHD 142
Query: 218 QQIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLPDLEFA------SPEMLTSPATA 270
+ I ++D++ +N+L++ KL D G + F +PE+L
Sbjct: 143 KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQE-MLY 201
Query: 271 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFP 313
GP+ D W++GVLLY +L G +PF E+E++ I + +P
Sbjct: 202 GPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYP 244
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 112/263 (42%), Gaps = 27/263 (10%)
Query: 106 ERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRA----EYNLLSTLMHAHIPTA 161
+++G G+F V +A G VALK++ RA E +LL L H P
Sbjct: 38 KKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNH---PNV 94
Query: 162 LALFENAPVPGTDTIVMQLVHGESL---IQHLCRQST-ITESYICCIIRQLHSALHCLHS 217
+ + + IV++L L I+H +Q I E + QL SAL +HS
Sbjct: 95 IKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHS 154
Query: 218 QQIAHKDIRPENILMNG-AVLKLIDLGXXXXXXXXXLPDLEFASPEMLTSPATAGP---- 272
+++ H+DI+P N+ + V+KL DLG A+ ++ +P P
Sbjct: 155 RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT-----AAHSLVGTPYYMSPERIH 209
Query: 273 ------STDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 326
+D+WSLG LLY + + SPF + + +PP H S R+
Sbjct: 210 ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQ 269
Query: 327 LIGQLLNTHADKRPTAGQLLQVA 349
L+ +N +KRP + VA
Sbjct: 270 LVNMCINPDPEKRPDVTYVYDVA 292
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 112/263 (42%), Gaps = 19/263 (7%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLM-HAHIPT 160
+E +E +GNG + V K R TGQL A+K + ++ + E N+L H +I T
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIAT 85
Query: 161 ALALFENAPVPGTDT---IVMQLVHGESLIQHL--CRQSTITESYICCIIRQLHSALHCL 215
F PG D +VM+ S+ + + +T+ E +I I R++ L L
Sbjct: 86 YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHL 145
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLPDLEF------ASPEMLTS-- 266
H ++ H+DI+ +N+L+ A +KL+D G F +PE++
Sbjct: 146 HQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDE 205
Query: 267 --PATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPA 324
AT +D+WSLG+ + G P D RA + P + S
Sbjct: 206 NPDATYDFKSDLWSLGITAIEMAEGAPPLCD--MHPMRALFLIPRNPAPRLKSKKWSKKF 263
Query: 325 RELIGQLLNTHADKRPTAGQLLQ 347
+ I L + +RP QL++
Sbjct: 264 QSFIESCLVKNHSQRPATEQLMK 286
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 132/295 (44%), Gaps = 39/295 (13%)
Query: 97 QFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHA 156
+F ++++E++G G + V KAR++ TG++VALK+I + + + + +S L
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 66
Query: 157 HIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITE---SYICCIIRQLHSALH 213
+ P + L + +V + +H + ++ S +T I + QL L
Sbjct: 67 NHPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLA 124
Query: 214 CLHSQQIAHKDIRPENILMN--GAVLKLIDLGXXXX------XXXXXLPDLEFASPEMLT 265
HS ++ H+D++P+N+L+N GA+ KL D G + L + +PE+L
Sbjct: 125 FCHSHRVLHRDLKPQNLLINTEGAI-KLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 183
Query: 266 SPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI----------------SVAD 309
+ D+WSLG + +++ + F +SE + I S+ D
Sbjct: 184 GXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 243
Query: 310 Y--SFPPEQCGHIS--VP-----ARELIGQLLNTHADKRPTAGQLLQVAWFAEAS 355
Y SFP S VP R L+ Q+L+ +KR +A L +F + +
Sbjct: 244 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 298
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 114/255 (44%), Gaps = 21/255 (8%)
Query: 102 YEELERLGNGRFCTV---RKARDRGTGQLVALKQIPR---ERQPQQITRAEYNLLSTLMH 155
+E L+ LG G F V RK +G L A+K + + + + + T+ E ++L+ + H
Sbjct: 30 FELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNH 89
Query: 156 AHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
P + L G +++ + G L L ++ TE + + +L L L
Sbjct: 90 ---PFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHL 146
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXXX------XXXXXXLPDLEFASPEMLTSPA 268
HS I ++D++PENIL++ +KL D G +E+ +PE++
Sbjct: 147 HSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQG 206
Query: 269 TAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELI 328
+ S D WS GVL++ +L+G PF + +ET I A P +S A+ L+
Sbjct: 207 HS-HSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQ----FLSTEAQSLL 261
Query: 329 GQLLNTHADKRPTAG 343
L + R +G
Sbjct: 262 RALFKRNPANRLGSG 276
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 118/282 (41%), Gaps = 23/282 (8%)
Query: 98 FEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIP----------RERQPQQITRAEY 147
F YE E LG G VR+ + T + A+K I ++ ++ T E
Sbjct: 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEV 74
Query: 148 NLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQ 207
++L + H P + L + +V L+ L +L + T++E I+R
Sbjct: 75 DILRKV-SGH-PNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 132
Query: 208 LHSALHCLHSQQIAHKDIRPENILMNGAV-LKLIDLGXXXXXX-XXXLPDL----EFASP 261
L + LH I H+D++PENIL++ + +KL D G L ++ + +P
Sbjct: 133 LLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAP 192
Query: 262 EMLTSPAT-----AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQ 316
E++ G DMWS GV++Y LL+G PF + I +Y F +
Sbjct: 193 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPE 252
Query: 317 CGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEASCSE 358
S ++L+ + L KR TA + L +F + E
Sbjct: 253 WDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYVVEE 294
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 134/291 (46%), Gaps = 41/291 (14%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + + +T+ ++ +I Q+ L +
Sbjct: 79 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCAKLTDDHVQFLIYQILRGLKYI 137
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXXXXX---XXXXLPDLEFASPEMLTSPATAG 271
HS I H+D++P N+ +N LK++D G + + +PE++ +
Sbjct: 138 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 197
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHI-S 306
+ D+WS+G ++ LL+G + F +D+ S E R +I S
Sbjct: 198 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 257
Query: 307 VADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
+A P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 258 LA--QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 115/282 (40%), Gaps = 23/282 (8%)
Query: 98 FEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIP----------RERQPQQITRAEY 147
F YE E LG G VR+ + T + A+K I ++ ++ T E
Sbjct: 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEV 74
Query: 148 NLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQ 207
++L + H P + L + +V L+ L +L + T++E I+R
Sbjct: 75 DILRKV-SGH-PNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 132
Query: 208 LHSALHCLHSQQIAHKDIRPENILMNGAV-LKLIDLGXX-----XXXXXXXLPDLEFASP 261
L + LH I H+D++PENIL++ + +KL D G + +P
Sbjct: 133 LLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAP 192
Query: 262 EMLTSPAT-----AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQ 316
E++ G DMWS GV++Y LL+G PF + I +Y F +
Sbjct: 193 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPE 252
Query: 317 CGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEASCSE 358
S ++L+ + L KR TA + L +F + E
Sbjct: 253 WDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYVVEE 294
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 113/256 (44%), Gaps = 21/256 (8%)
Query: 101 RYEELERLGNGRFCTV---RKARDRGTGQLVALKQIPR---ERQPQQITRAEYNLLSTLM 154
++E L+ LG G F V +K QL A+K + + + + + T+ E ++L +
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 84
Query: 155 HAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHC 214
H P + L G +++ + G L L ++ TE + + +L AL
Sbjct: 85 H---PFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDH 141
Query: 215 LHSQQIAHKDIRPENILMN-GAVLKLIDLGXXX------XXXXXXLPDLEFASPEMLTSP 267
LHS I ++D++PENIL++ +KL D G +E+ +PE++
Sbjct: 142 LHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRR 201
Query: 268 ATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAREL 327
S D WS GVL++ +L+G PF + +ET I A P +S A+ L
Sbjct: 202 GHT-QSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ----FLSPEAQSL 256
Query: 328 IGQLLNTHADKRPTAG 343
+ L + R AG
Sbjct: 257 LRMLFKRNPANRLGAG 272
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 117/277 (42%), Gaps = 23/277 (8%)
Query: 98 FEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIP----------RERQPQQITRAEY 147
F YE E LG G VR+ + T + A+K I ++ ++ T E
Sbjct: 2 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEV 61
Query: 148 NLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQ 207
++L + H P + L + +V L+ L +L + T++E I+R
Sbjct: 62 DILRKV-SGH-PNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 119
Query: 208 LHSALHCLHSQQIAHKDIRPENILMNGAV-LKLIDLGXXXXXX-XXXLPDL----EFASP 261
L + LH I H+D++PENIL++ + +KL D G L ++ + +P
Sbjct: 120 LLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAP 179
Query: 262 EMLTSPAT-----AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQ 316
E++ G DMWS GV++Y LL+G PF + I +Y F +
Sbjct: 180 EIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPE 239
Query: 317 CGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAE 353
S ++L+ + L KR TA + L +F +
Sbjct: 240 WDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 276
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 132/295 (44%), Gaps = 39/295 (13%)
Query: 97 QFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHA 156
+F ++++E++G G + V KAR++ TG++VALK+I + + + + +S L
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 66
Query: 157 HIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITE---SYICCIIRQLHSALH 213
+ P + L + +V + +H + ++ S +T I + QL L
Sbjct: 67 NHPNIVKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLA 124
Query: 214 CLHSQQIAHKDIRPENILMN--GAVLKLIDLGXXXX------XXXXXLPDLEFASPEMLT 265
HS ++ H+D++P+N+L+N GA+ KL D G + L + +PE+L
Sbjct: 125 FCHSHRVLHRDLKPQNLLINTEGAI-KLADFGLARAFGVPVRTYTHEVVTLWYRAPEILL 183
Query: 266 SPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI----------------SVAD 309
+ D+WSLG + +++ + F +SE + I S+ D
Sbjct: 184 GCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 243
Query: 310 Y--SFPPEQCGHIS--VP-----ARELIGQLLNTHADKRPTAGQLLQVAWFAEAS 355
Y SFP S VP R L+ Q+L+ +KR +A L +F + +
Sbjct: 244 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 298
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 110/255 (43%), Gaps = 11/255 (4%)
Query: 99 EHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHI 158
E + +L+R+G G F V K D T ++VA+K I E +I + + + L
Sbjct: 18 EELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEI-TVLSQCDS 76
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P F + I+M+ + G S + L + + E+YI I+R++ L LHS+
Sbjct: 77 PYITRYFGSYLKSTKLWIIMEYLGGGSALD-LLKPGPLEETYIATILREILKGLDYLHSE 135
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLPDLEFASPEMLTSPATAGPS---- 273
+ H+DI+ N+L++ +KL D G + F +P S
Sbjct: 136 RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDF 195
Query: 274 -TDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLL 332
D+WSLG+ L G P S+ + + + PP G S P +E + L
Sbjct: 196 KADIWSLGITAIELAKGEPP---NSDLHPMRVLFLIPKNSPPTLEGQHSKPFKEFVEACL 252
Query: 333 NTHADKRPTAGQLLQ 347
N RPTA +LL+
Sbjct: 253 NKDPRFRPTAKELLK 267
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 113/256 (44%), Gaps = 21/256 (8%)
Query: 101 RYEELERLGNGRFCTV---RKARDRGTGQLVALKQIPR---ERQPQQITRAEYNLLSTLM 154
++E L+ LG G F V +K QL A+K + + + + + T+ E ++L +
Sbjct: 26 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 85
Query: 155 HAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHC 214
H P + L G +++ + G L L ++ TE + + +L AL
Sbjct: 86 H---PFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDH 142
Query: 215 LHSQQIAHKDIRPENILMN-GAVLKLIDLGXXX------XXXXXXLPDLEFASPEMLTSP 267
LHS I ++D++PENIL++ +KL D G +E+ +PE++
Sbjct: 143 LHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRR 202
Query: 268 ATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAREL 327
S D WS GVL++ +L+G PF + +ET I A P +S A+ L
Sbjct: 203 GHT-QSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ----FLSPEAQSL 257
Query: 328 IGQLLNTHADKRPTAG 343
+ L + R AG
Sbjct: 258 LRMLFKRNPANRLGAG 273
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 119/267 (44%), Gaps = 20/267 (7%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALKQIPRERQPQ----QITRAEYNLLSTLMHAHIPTALA 163
LG G F V +A TG VA+K I ++ + Q + E + L H P+ L
Sbjct: 19 LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH---PSILE 75
Query: 164 LFENAPVPGTDTIVMQLVHGESLIQHL-CRQSTITESYICCIIRQLHSALHCLHSQQIAH 222
L+ +V+++ H + ++L R +E+ + Q+ + + LHS I H
Sbjct: 76 LYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILH 135
Query: 223 KDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDL------EFASPEMLTSPATAGPSTD 275
+D+ N+L+ + +K+ D G + SPE+ T A G +D
Sbjct: 136 RDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSA-HGLESD 194
Query: 276 MWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTH 335
+WSLG + Y LL G PF ++ + T + +ADY P +S+ A++LI QLL +
Sbjct: 195 VWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMP----SFLSIEAKDLIHQLLRRN 250
Query: 336 ADKRPTAGQLLQVAWFAEASCSEFDTE 362
R + +L + + S ++ E
Sbjct: 251 PADRLSLSSVLDHPFMSRNSSTKSKDE 277
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 113/256 (44%), Gaps = 21/256 (8%)
Query: 101 RYEELERLGNGRFCTV---RKARDRGTGQLVALKQIPR---ERQPQQITRAEYNLLSTLM 154
++E L+ LG G F V +K QL A+K + + + + + T+ E ++L +
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN 84
Query: 155 HAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHC 214
H P + L G +++ + G L L ++ TE + + +L AL
Sbjct: 85 H---PFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDH 141
Query: 215 LHSQQIAHKDIRPENILMN-GAVLKLIDLGXXX------XXXXXXLPDLEFASPEMLTSP 267
LHS I ++D++PENIL++ +KL D G +E+ +PE++
Sbjct: 142 LHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRR 201
Query: 268 ATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAREL 327
S D WS GVL++ +L+G PF + +ET I A P +S A+ L
Sbjct: 202 GHT-QSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ----FLSPEAQSL 256
Query: 328 IGQLLNTHADKRPTAG 343
+ L + R AG
Sbjct: 257 LRMLFKRNPANRLGAG 272
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 131/290 (45%), Gaps = 39/290 (13%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKSQKLTDDHVQFLIYQILRGLKYI 141
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGX---XXXXXXXXLPDLEFASPEMLTSPATAG 271
HS I H+D++P N+ +N + LK++D G + + +PE++ +
Sbjct: 142 HSADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHISV 307
+ D+WS+G ++ LL+G + F +D+ S E R +I
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 308 ADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 262 LT-QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 133/291 (45%), Gaps = 41/291 (14%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 79 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYI 137
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXXXXX---XXXXLPDLEFASPEMLTSPATAG 271
HS I H+D++P N+ +N LK++D G + + +PE++ +
Sbjct: 138 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 197
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHI-S 306
+ D+WS+G ++ LL+G + F +D+ S E R +I S
Sbjct: 198 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 257
Query: 307 VADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
+A P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 258 LA--QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 133/291 (45%), Gaps = 41/291 (14%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 102
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 103 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYI 161
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLPDLE---FASPEMLTSPATAG 271
HS I H+D++P N+ +N LK++D G + + +PE++ +
Sbjct: 162 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATRWYRAPEIMLNWMHYN 221
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHI-S 306
+ D+WS+G ++ LL+G + F +D+ S E R +I S
Sbjct: 222 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 281
Query: 307 VADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
+A P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 282 LA--QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 330
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 133/291 (45%), Gaps = 41/291 (14%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXXX---XXXXXXLPDLEFASPEMLTSPATAG 271
HS I H+D++P N+ +N LK++D G + + +PE++ +
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHI-S 306
+ D+WS+G ++ LL+G + F +D+ S E R +I S
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 307 VADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
+A P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 262 LA--QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 133/291 (45%), Gaps = 41/291 (14%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 79 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYI 137
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXXXXX---XXXXLPDLEFASPEMLTSPATAG 271
HS I H+D++P N+ +N LK++D G + + +PE++ +
Sbjct: 138 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYN 197
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHI-S 306
+ D+WS+G ++ LL+G + F +D+ S E R +I S
Sbjct: 198 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 257
Query: 307 VADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
+A P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 258 LA--QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 133/291 (45%), Gaps = 41/291 (14%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXXX---XXXXXXLPDLEFASPEMLTSPATAG 271
HS I H+D++P N+ +N LK++D G + + +PE++ +
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYN 201
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHI-S 306
+ D+WS+G ++ LL+G + F +D+ S E R +I S
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 307 VADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
+A P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 262 LA--QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 131/290 (45%), Gaps = 39/290 (13%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTA 161
++++E++G G + V KAR++ TG++VALK+I + + + + +S L + P
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 162 LALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITE---SYICCIIRQLHSALHCLHSQ 218
+ L + +V + +H + ++ S +T I + QL L HS
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQD--LKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 219 QIAHKDIRPENILMN--GAVLKLIDLGXXXX------XXXXXLPDLEFASPEMLTSPATA 270
++ H+D++PEN+L+N GA+ KL D G + L + +PE+L
Sbjct: 123 RVLHRDLKPENLLINTEGAI-KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 181
Query: 271 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI----------------SVADY--SF 312
+ D+WSLG + +++ + F +SE + I S+ DY SF
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 241
Query: 313 PPEQCGHIS--VP-----ARELIGQLLNTHADKRPTAGQLLQVAWFAEAS 355
P S VP R L+ Q+L+ +KR +A L +F + +
Sbjct: 242 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 133/291 (45%), Gaps = 41/291 (14%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 89 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYI 147
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXXXXX---XXXXLPDLEFASPEMLTSPATAG 271
HS I H+D++P N+ +N LK++D G + + +PE++ +
Sbjct: 148 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 207
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHI-S 306
+ D+WS+G ++ LL+G + F +D+ S E R +I S
Sbjct: 208 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 267
Query: 307 VADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
+A P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 268 LA--QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 316
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 133/291 (45%), Gaps = 41/291 (14%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 33 RYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 92
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 93 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYI 151
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXX---XXXXXXXLPDLEFASPEMLTSPATAG 271
HS I H+D++P N+ +N LK++D G + + +PE++ +
Sbjct: 152 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 211
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHI-S 306
+ D+WS+G ++ LL+G + F +D+ S E R +I S
Sbjct: 212 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 271
Query: 307 VADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
+A P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 272 LA--QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 320
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 133/291 (45%), Gaps = 41/291 (14%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 102
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 103 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYI 161
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXXX---XXXXXXLPDLEFASPEMLTSPATAG 271
HS I H+D++P N+ +N LK++D G + + +PE++ +
Sbjct: 162 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 221
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHI-S 306
+ D+WS+G ++ LL+G + F +D+ S E R +I S
Sbjct: 222 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 281
Query: 307 VADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
+A P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 282 LA--QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 330
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 131/290 (45%), Gaps = 39/290 (13%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTA 161
++++E++G G + V KAR++ TG++VALK+I + + + + +S L + P
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 162 LALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITE---SYICCIIRQLHSALHCLHSQ 218
+ L + +V + +H + ++ S +T I + QL L HS
Sbjct: 66 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 219 QIAHKDIRPENILMN--GAVLKLIDLGXXXX------XXXXXLPDLEFASPEMLTSPATA 270
++ H+D++PEN+L+N GA+ KL D G + L + +PE+L
Sbjct: 124 RVLHRDLKPENLLINTEGAI-KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 182
Query: 271 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI----------------SVADY--SF 312
+ D+WSLG + +++ + F +SE + I S+ DY SF
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 242
Query: 313 PPEQCGHIS--VP-----ARELIGQLLNTHADKRPTAGQLLQVAWFAEAS 355
P S VP R L+ Q+L+ +KR +A L +F + +
Sbjct: 243 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 292
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKXQKLTDDHVQFLIYQILRGLKYI 141
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGX---XXXXXXXXLPDLEFASPEMLTSPATAG 271
HS I H+D++P N+ +N LK++D G + + +PE++ +
Sbjct: 142 HSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHISV 307
+ D+WS+G ++ LL+G + F +D+ S E R +I
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 308 ADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 262 LT-QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKXQKLTDDHVQFLIYQILRGLKYI 141
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXXX---XXXXXXLPDLEFASPEMLTSPATAG 271
HS I H+D++P N+ +N LK++D G + + +PE++ +
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHISV 307
+ D+WS+G ++ LL+G + F +D+ S E R +I
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 308 ADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 262 LT-QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 131/290 (45%), Gaps = 39/290 (13%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTA 161
++++E++G G + V KAR++ TG++VALK+I + + + + +S L + P
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 162 LALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITE---SYICCIIRQLHSALHCLHSQ 218
+ L + +V + +H + ++ S +T I + QL L HS
Sbjct: 67 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 219 QIAHKDIRPENILMN--GAVLKLIDLGXXXX------XXXXXLPDLEFASPEMLTSPATA 270
++ H+D++PEN+L+N GA+ KL D G + L + +PE+L
Sbjct: 125 RVLHRDLKPENLLINTEGAI-KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 183
Query: 271 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI----------------SVADY--SF 312
+ D+WSLG + +++ + F +SE + I S+ DY SF
Sbjct: 184 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 243
Query: 313 PPEQCGHIS--VP-----ARELIGQLLNTHADKRPTAGQLLQVAWFAEAS 355
P S VP R L+ Q+L+ +KR +A L +F + +
Sbjct: 244 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 293
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTA 161
++++E++G G + V KAR++ TG++VALK+I + + + + +S L + P
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 162 LALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITE---SYICCIIRQLHSALHCLHSQ 218
+ L + +V + +H + ++ S +T I + QL L HS
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 219 QIAHKDIRPENILMN--GAVLKLIDLGXXXX------XXXXXLPDLEFASPEMLTSPATA 270
++ H+D++P+N+L+N GA+ KL D G + L + +PE+L
Sbjct: 123 RVLHRDLKPQNLLINTEGAI-KLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYY 181
Query: 271 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI----------------SVADY--SF 312
+ D+WSLG + +++ + F +SE + I S+ DY SF
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 241
Query: 313 PPEQCGHIS--VP-----ARELIGQLLNTHADKRPTAGQLLQVAWFAEAS 355
P S VP R L+ Q+L+ +KR +A L +F + +
Sbjct: 242 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 133/291 (45%), Gaps = 41/291 (14%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 42 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 101
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 102 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYI 160
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXXX---XXXXXXLPDLEFASPEMLTSPATAG 271
HS I H+D++P N+ +N LK++D G + + +PE++ +
Sbjct: 161 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 220
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHI-S 306
+ D+WS+G ++ LL+G + F +D+ S E R +I S
Sbjct: 221 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 280
Query: 307 VADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
+A P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 281 LA--QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 329
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLPDLE---FASPEMLTSPATAG 271
HS I H+D++P N+ +N LK++D G + + +PE++ +
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNAMHYN 201
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHISV 307
+ D+WS+G ++ LL+G + F +D+ S E R +I
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 308 ADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 262 LT-QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXXX---XXXXXXLPDLEFASPEMLTSPATAG 271
HS I H+D++P N+ +N LK++D G + + +PE++ +
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYN 201
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHISV 307
+ D+WS+G ++ LL+G + F +D+ S E R +I
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 308 ADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 262 LT-QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 131/290 (45%), Gaps = 39/290 (13%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 85 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYI 143
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXXX---XXXXXXLPDLEFASPEMLTSPATAG 271
HS I H+D++P N+ +N + LK++D G + + +PE++ +
Sbjct: 144 HSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 203
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHISV 307
+ D+WS+G ++ LL+G + F +D+ S E R +I
Sbjct: 204 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 263
Query: 308 ADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 264 LT-QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 312
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLPDLE---FASPEMLTSPATAG 271
HS I H+D++P N+ +N LK++D G + + +PE++ +
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATRWYRAPEIMLNWMHYN 201
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHISV 307
+ D+WS+G ++ LL+G + F +D+ S E R +I
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 308 ADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 262 LT-QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTA 161
++++E++G G + V KAR++ TG++VALK+I + + + + +S L + P
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 162 LALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITE---SYICCIIRQLHSALHCLHSQ 218
+ L + +V + +H + ++ S +T I + QL L HS
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSH 122
Query: 219 QIAHKDIRPENILMN--GAVLKLIDLGXXXX------XXXXXLPDLEFASPEMLTSPATA 270
++ H+D++P+N+L+N GA+ KL D G + L + +PE+L
Sbjct: 123 RVLHRDLKPQNLLINTEGAI-KLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 181
Query: 271 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI----------------SVADY--SF 312
+ D+WSLG + +++ + F +SE + I S+ DY SF
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 241
Query: 313 PPEQCGHIS--VP-----ARELIGQLLNTHADKRPTAGQLLQVAWFAEAS 355
P S VP R L+ Q+L+ +KR +A L +F + +
Sbjct: 242 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 105
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 106 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYI 164
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLPDLE---FASPEMLTSPATAG 271
HS I H+D++P N+ +N LK++D G + + +PE++ +
Sbjct: 165 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATRWYRAPEIMLNWMHYN 224
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHISV 307
+ D+WS+G ++ LL+G + F +D+ S E R +I
Sbjct: 225 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 284
Query: 308 ADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 285 LT-QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 333
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 131/290 (45%), Gaps = 39/290 (13%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 89 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYI 147
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXX---XXXXXXXLPDLEFASPEMLTSPATAG 271
HS I H+D++P N+ +N + LK++D G + + +PE++ +
Sbjct: 148 HSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 207
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHISV 307
+ D+WS+G ++ LL+G + F +D+ S E R +I
Sbjct: 208 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 267
Query: 308 ADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 268 LT-QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 316
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 105/237 (44%), Gaps = 33/237 (13%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITR--AEYNLLSTLMHAHI- 158
+E ERLG G F V + + TG+ VA+KQ +E P+ R E ++ L H ++
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 159 -----PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQST---ITESYICCIIRQLHS 210
P L +P + M+ G L ++L + + E I ++ + S
Sbjct: 76 SAREVPDGLQKLAPNDLP---LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS 132
Query: 211 ALHCLHSQQIAHKDIRPENILMNGA----VLKLIDLGXXXXXXXXXL-----PDLEFASP 261
AL LH +I H+D++PENI++ + K+IDLG L L++ +P
Sbjct: 133 ALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAP 192
Query: 262 EMLTSPATAGPSTDMWSLGVLLYILLSGVSPFL---------DESEEETRAHISVAD 309
E+L + D WS G L + ++G PFL + E++ HI V D
Sbjct: 193 ELLEQKKYT-VTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYD 248
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 28 RYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 88 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYI 146
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXXX---XXXXXXLPDLEFASPEMLTSPATAG 271
HS I H+D++P N+ +N LK++D G + + +PE++ +
Sbjct: 147 HSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 206
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHISV 307
+ D+WS+G ++ LL+G + F +D+ S E R +I
Sbjct: 207 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 266
Query: 308 ADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 267 LT-QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 315
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 105/237 (44%), Gaps = 33/237 (13%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITR--AEYNLLSTLMHAHI- 158
+E ERLG G F V + + TG+ VA+KQ +E P+ R E ++ L H ++
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 159 -----PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQST---ITESYICCIIRQLHS 210
P L +P + M+ G L ++L + + E I ++ + S
Sbjct: 77 SAREVPDGLQKLAPNDLP---LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISS 133
Query: 211 ALHCLHSQQIAHKDIRPENILMNGA----VLKLIDLGXXXXXXXXXL-----PDLEFASP 261
AL LH +I H+D++PENI++ + K+IDLG L L++ +P
Sbjct: 134 ALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAP 193
Query: 262 EMLTSPATAGPSTDMWSLGVLLYILLSGVSPFL---------DESEEETRAHISVAD 309
E+L + D WS G L + ++G PFL + E++ HI V D
Sbjct: 194 ELLEQKKYT-VTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYD 249
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTA 161
++++E++G G + V KAR++ TG++VALK+I + + + + +S L + P
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 162 LALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITE---SYICCIIRQLHSALHCLHSQ 218
+ L + +V + +H + ++ S +T I + QL L HS
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 219 QIAHKDIRPENILMN--GAVLKLIDLGXXXX------XXXXXLPDLEFASPEMLTSPATA 270
++ H+D++P+N+L+N GA+ KL D G + L + +PE+L
Sbjct: 123 RVLHRDLKPQNLLINTEGAI-KLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 181
Query: 271 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI----------------SVADY--SF 312
+ D+WSLG + +++ + F +SE + I S+ DY SF
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 241
Query: 313 PPEQCGHIS--VP-----ARELIGQLLNTHADKRPTAGQLLQVAWFAEAS 355
P S VP R L+ Q+L+ +KR +A L +F + +
Sbjct: 242 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTA 161
++++E++G G + V KAR++ TG++VALK+I + + + + +S L + P
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 162 LALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITE---SYICCIIRQLHSALHCLHSQ 218
+ L + +V + +H + ++ S +T I + QL L HS
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 219 QIAHKDIRPENILMN--GAVLKLIDLGXXXX------XXXXXLPDLEFASPEMLTSPATA 270
++ H+D++P+N+L+N GA+ KL D G + L + +PE+L
Sbjct: 122 RVLHRDLKPQNLLINTEGAI-KLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 271 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI----------------SVADY--SF 312
+ D+WSLG + +++ + F +SE + I S+ DY SF
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 240
Query: 313 PPEQCGHIS--VP-----ARELIGQLLNTHADKRPTAGQLLQVAWFAEAS 355
P S VP R L+ Q+L+ +KR +A L +F + +
Sbjct: 241 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 79
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 80 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYI 138
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXXX---XXXXXXLPDLEFASPEMLTSPATAG 271
HS I H+D++P N+ +N LK++D G + + +PE++ +
Sbjct: 139 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 198
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHISV 307
+ D+WS+G ++ LL+G + F +D+ S E R +I
Sbjct: 199 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 258
Query: 308 ADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 259 LT-QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 307
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 88 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYI 146
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXXX---XXXXXXLPDLEFASPEMLTSPATAG 271
HS I H+D++P N+ +N LK++D G + + +PE++ +
Sbjct: 147 HSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 206
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHISV 307
+ D+WS+G ++ LL+G + F +D+ S E R +I
Sbjct: 207 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 266
Query: 308 ADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 267 LT-QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 315
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 90 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYI 148
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXX---XXXXXXXLPDLEFASPEMLTSPATAG 271
HS I H+D++P N+ +N LK++D G + + +PE++ +
Sbjct: 149 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYN 208
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHISV 307
+ D+WS+G ++ LL+G + F +D+ S E R +I
Sbjct: 209 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 268
Query: 308 ADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 269 LT-QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 21 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 80
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 81 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYI 139
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXXX---XXXXXXLPDLEFASPEMLTSPATAG 271
HS I H+D++P N+ +N LK++D G + + +PE++ +
Sbjct: 140 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 199
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHISV 307
+ D+WS+G ++ LL+G + F +D+ S E R +I
Sbjct: 200 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 259
Query: 308 ADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 260 LT-QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 308
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 90 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYI 148
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXX---XXXXXXXLPDLEFASPEMLTSPATAG 271
HS I H+D++P N+ +N LK++D G + + +PE++ +
Sbjct: 149 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYN 208
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHISV 307
+ D+WS+G ++ LL+G + F +D+ S E R +I
Sbjct: 209 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 268
Query: 308 ADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 269 LT-QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTA 161
++++E++G G + V KAR++ TG++VALK+I + + + + +S L + P
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 162 LALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITE---SYICCIIRQLHSALHCLHSQ 218
+ L + +V + +H + ++ S +T I + QL L HS
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 219 QIAHKDIRPENILMN--GAVLKLIDLGXXXX------XXXXXLPDLEFASPEMLTSPATA 270
++ H+D++P+N+L+N GA+ KL D G + L + +PE+L
Sbjct: 122 RVLHRDLKPQNLLINTEGAI-KLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 271 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI----------------SVADY--SF 312
+ D+WSLG + +++ + F +SE + I S+ DY SF
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 240
Query: 313 PPEQCGHIS--VP-----ARELIGQLLNTHADKRPTAGQLLQVAWFAEAS 355
P S VP R L+ Q+L+ +KR +A L +F + +
Sbjct: 241 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 88 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYI 146
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXX---XXXXXXXLPDLEFASPEMLTSPATAG 271
HS I H+D++P N+ +N LK++D G + + +PE++ +
Sbjct: 147 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 206
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHISV 307
+ D+WS+G ++ LL+G + F +D+ S E R +I
Sbjct: 207 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 266
Query: 308 ADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 267 LT-QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 315
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 85 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYI 143
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXXX---XXXXXXLPDLEFASPEMLTSPATAG 271
HS I H+D++P N+ +N LK++D G + + +PE++ +
Sbjct: 144 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 203
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHISV 307
+ D+WS+G ++ LL+G + F +D+ S E R +I
Sbjct: 204 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 263
Query: 308 ADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 264 LT-QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 312
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 106/245 (43%), Gaps = 12/245 (4%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRAEYNLLSTLMHAHI 158
++E ++ LG G F V + + TG A+K + +++ + +QI N L +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 100
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + L + +VM+ V G + HL R +E + Q+ LHS
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLP---DLEFASPEMLTSPATAGPST 274
+ ++D++PEN+L++ +++ D G E+ +PE++ S +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY-NKAV 219
Query: 275 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 334
D W+LGVL+Y + +G PF + + I FP H S ++L+ LL
Sbjct: 220 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQV 275
Query: 335 HADKR 339
KR
Sbjct: 276 DLTKR 280
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 90 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYI 148
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXX---XXXXXXXLPDLEFASPEMLTSPATAG 271
HS I H+D++P N+ +N LK++D G + + +PE++ +
Sbjct: 149 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYN 208
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHISV 307
+ D+WS+G ++ LL+G + F +D+ S E R +I
Sbjct: 209 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 268
Query: 308 ADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 269 LT-QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 79 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYI 137
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXXX---XXXXXXLPDLEFASPEMLTSPATAG 271
HS I H+D++P N+ +N LK++D G + + +PE++ +
Sbjct: 138 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 197
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHISV 307
+ D+WS+G ++ LL+G + F +D+ S E R +I
Sbjct: 198 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 257
Query: 308 ADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 258 LT-QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 106/245 (43%), Gaps = 12/245 (4%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRAEYNLLSTLMHAHI 158
++E ++ LG G F V + + TG A+K + +++ + +QI N L +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 100
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + L + +VM+ V G + HL R +E + Q+ LHS
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLP---DLEFASPEMLTSPATAGPST 274
+ ++D++PEN+L++ +++ D G E+ +PE++ S +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY-NKAV 219
Query: 275 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 334
D W+LGVL+Y + +G PF + + I FP H S ++L+ LL
Sbjct: 220 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQV 275
Query: 335 HADKR 339
KR
Sbjct: 276 DLTKR 280
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTA 161
++++E++G G + V KAR++ TG++VALK+I + + + + +S L + P
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 162 LALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITE---SYICCIIRQLHSALHCLHSQ 218
+ L + +V + +H + ++ S +T I + QL L HS
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 219 QIAHKDIRPENILMN--GAVLKLIDLGXXXX------XXXXXLPDLEFASPEMLTSPATA 270
++ H+D++P+N+L+N GA+ KL D G + L + +PE+L
Sbjct: 123 RVLHRDLKPQNLLINTEGAI-KLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 181
Query: 271 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI----------------SVADY--SF 312
+ D+WSLG + +++ + F +SE + I S+ DY SF
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 241
Query: 313 PPEQCGHIS--VP-----ARELIGQLLNTHADKRPTAGQLLQVAWFAEAS 355
P S VP R L+ Q+L+ +KR +A L +F + +
Sbjct: 242 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXXX---XXXXXXLPDLEFASPEMLTSPATAG 271
HS I H+D++P N+ +N LK++D G + + +PE++ +
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHISV 307
+ D+WS+G ++ LL+G + F +D+ S E R +I
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 308 ADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 262 LT-QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 93
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 94 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYI 152
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXXX---XXXXXXLPDLEFASPEMLTSPATAG 271
HS I H+D++P N+ +N LK++D G + + +PE++ +
Sbjct: 153 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 212
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHISV 307
+ D+WS+G ++ LL+G + F +D+ S E R +I
Sbjct: 213 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 272
Query: 308 ADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 273 LT-QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 321
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 113/271 (41%), Gaps = 36/271 (13%)
Query: 96 EQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMH 155
+Q E ++ LE+LG G + +V KA + TGQ+VA+KQ+P E Q+I + +S +
Sbjct: 25 KQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKE----ISIMQQ 80
Query: 156 AHIPTALALFENAPVPGTDT-IVMQLVHGESLIQHL-CRQSTITESYICCIIRQLHSALH 213
P + + + TD IVM+ S+ + R T+TE I I++ L
Sbjct: 81 CDSPHVVKYY-GSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLE 139
Query: 214 CLHSQQIAHKDIRPENILMNG-AVLKLIDLGXXXXXXXXXLPDLEFASPEMLTSPATAGP 272
LH + H+DI+ NIL+N KL D G L D ++ +P P
Sbjct: 140 YLHFMRKIHRDIKAGNILLNTEGHAKLADFG-----VAGQLTDXMAKRNXVIGTPFWMAP 194
Query: 273 ST----------DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISV 322
D+WSLG+ + G P+ D H A + P
Sbjct: 195 EVIQEIGYNCVADIWSLGITAIEMAEGKPPYAD-------IHPMRAIFMIPTNPPPTFRK 247
Query: 323 PA------RELIGQLLNTHADKRPTAGQLLQ 347
P + + Q L ++R TA QLLQ
Sbjct: 248 PELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 79
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 80 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYI 138
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXXX---XXXXXXLPDLEFASPEMLTSPATAG 271
HS I H+D++P N+ +N LK++D G + + +PE++ +
Sbjct: 139 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 198
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHISV 307
+ D+WS+G ++ LL+G + F +D+ S E R +I
Sbjct: 199 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 258
Query: 308 ADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 259 LT-QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 307
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 106/245 (43%), Gaps = 12/245 (4%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRAEYNLLSTLMHAHI 158
++E ++ LG G F V + + TG A+K + +++ + +QI N L +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 100
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + L + +VM+ V G + HL R +E + Q+ LHS
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLP---DLEFASPEMLTSPATAGPST 274
+ ++D++PEN+L++ +++ D G E+ +PE++ S +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY-NKAV 219
Query: 275 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 334
D W+LGVL+Y + +G PF + + I FP H S ++L+ LL
Sbjct: 220 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQV 275
Query: 335 HADKR 339
KR
Sbjct: 276 DLTKR 280
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 131/290 (45%), Gaps = 39/290 (13%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTA 161
++++E++G G + V KAR++ TG++VALK+I + + + + +S L + P
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 162 LALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITE---SYICCIIRQLHSALHCLHSQ 218
+ L + +V + +H + ++ S +T I + QL L HS
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 219 QIAHKDIRPENILMN--GAVLKLIDLGXXXX------XXXXXLPDLEFASPEMLTSPATA 270
++ H+D++P+N+L+N GA+ KL D G + L + +PE+L
Sbjct: 123 RVLHRDLKPQNLLINTEGAI-KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 181
Query: 271 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI----------------SVADY--SF 312
+ D+WSLG + +++ + F +SE + I S+ DY SF
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 241
Query: 313 PPEQCGHIS--VP-----ARELIGQLLNTHADKRPTAGQLLQVAWFAEAS 355
P S VP R L+ Q+L+ +KR +A L +F + +
Sbjct: 242 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXXX---XXXXXXLPDLEFASPEMLTSPATAG 271
HS I H+D++P N+ +N LK++D G + + +PE++ +
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHISV 307
+ D+WS+G ++ LL+G + F +D+ S E R +I
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 308 ADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 262 LT-QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXXX---XXXXXXLPDLEFASPEMLTSPATAG 271
HS I H+D++P N+ +N LK++D G + + +PE++ +
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHISV 307
+ D+WS+G ++ LL+G + F +D+ S E R +I
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 308 ADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 262 LT-QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTA 161
++++E++G G + V KAR++ TG++VALK+I + + + + +S L + P
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 162 LALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITE---SYICCIIRQLHSALHCLHSQ 218
+ L + +V + +H + ++ S +T I + QL L HS
Sbjct: 66 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 219 QIAHKDIRPENILMN--GAVLKLIDLGXXXX------XXXXXLPDLEFASPEMLTSPATA 270
++ H+D++P+N+L+N GA+ KL D G + L + +PE+L
Sbjct: 124 RVLHRDLKPQNLLINTEGAI-KLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 182
Query: 271 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI----------------SVADY--SF 312
+ D+WSLG + +++ + F +SE + I S+ DY SF
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 242
Query: 313 PPEQCGHIS--VP-----ARELIGQLLNTHADKRPTAGQLLQVAWFAEAS 355
P S VP R L+ Q+L+ +KR +A L +F + +
Sbjct: 243 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 292
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXXX---XXXXXXLPDLEFASPEMLTSPATAG 271
HS I H+D++P N+ +N LK++D G + + +PE++ +
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHISV 307
+ D+WS+G ++ LL+G + F +D+ S E R +I
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 308 ADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 262 LT-QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXXX---XXXXXXLPDLEFASPEMLTSPATAG 271
HS I H+D++P N+ +N LK++D G + + +PE++ +
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHISV 307
+ D+WS+G ++ LL+G + F +D+ S E R +I
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 308 ADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 262 LT-QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 85 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYI 143
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXXX---XXXXXXLPDLEFASPEMLTSPATAG 271
HS I H+D++P N+ +N LK++D G + + +PE++ +
Sbjct: 144 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 203
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHISV 307
+ D+WS+G ++ LL+G + F +D+ S E R +I
Sbjct: 204 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 263
Query: 308 ADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 264 LT-QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 312
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 88 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYI 146
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXXX---XXXXXXLPDLEFASPEMLTSPATAG 271
HS I H+D++P N+ +N LK++D G + + +PE++ +
Sbjct: 147 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 206
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHISV 307
+ D+WS+G ++ LL+G + F +D+ S E R +I
Sbjct: 207 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 266
Query: 308 ADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 267 LT-QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 315
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 22 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 81
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 82 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYI 140
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXXX---XXXXXXLPDLEFASPEMLTSPATAG 271
HS I H+D++P N+ +N LK++D G + + +PE++ +
Sbjct: 141 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 200
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHISV 307
+ D+WS+G ++ LL+G + F +D+ S E R +I
Sbjct: 201 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 260
Query: 308 ADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 261 LT-QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 309
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 90 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYI 148
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXXX---XXXXXXLPDLEFASPEMLTSPATAG 271
HS I H+D++P N+ +N LK++D G + + +PE++ +
Sbjct: 149 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 208
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHISV 307
+ D+WS+G ++ LL+G + F +D+ S E R +I
Sbjct: 209 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 268
Query: 308 ADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 269 LT-QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 131/290 (45%), Gaps = 39/290 (13%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTA 161
++++E++G G + V KAR++ TG++VALK+I + + + + +S L + P
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 162 LALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITE---SYICCIIRQLHSALHCLHSQ 218
+ L + +V + +H + ++ S +T I + QL L HS
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 219 QIAHKDIRPENILMN--GAVLKLIDLGXXXX------XXXXXLPDLEFASPEMLTSPATA 270
++ H+D++P+N+L+N GA+ KL D G + L + +PE+L
Sbjct: 122 RVLHRDLKPQNLLINTEGAI-KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 180
Query: 271 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI----------------SVADY--SF 312
+ D+WSLG + +++ + F +SE + I S+ DY SF
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 240
Query: 313 PPEQCGHIS--VP-----ARELIGQLLNTHADKRPTAGQLLQVAWFAEAS 355
P S VP R L+ Q+L+ +KR +A L +F + +
Sbjct: 241 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXXX---XXXXXXLPDLEFASPEMLTSPATAG 271
HS I H+D++P N+ +N LK++D G + + +PE++ +
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHISV 307
+ D+WS+G ++ LL+G + F +D+ S E R +I
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 308 ADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 262 LT-QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 89 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYI 147
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXXX---XXXXXXLPDLEFASPEMLTSPATAG 271
HS I H+D++P N+ +N LK++D G + + +PE++ +
Sbjct: 148 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 207
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHISV 307
+ D+WS+G ++ LL+G + F +D+ S E R +I
Sbjct: 208 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 267
Query: 308 ADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 268 LT-QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 316
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 131/290 (45%), Gaps = 39/290 (13%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTA 161
++++E++G G + V KAR++ TG++VALK+I + + + + +S L + P
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 162 LALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITE---SYICCIIRQLHSALHCLHSQ 218
+ L + +V + +H + ++ S +T I + QL L HS
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 219 QIAHKDIRPENILMN--GAVLKLIDLGXXXX------XXXXXLPDLEFASPEMLTSPATA 270
++ H+D++P+N+L+N GA+ KL D G + L + +PE+L
Sbjct: 123 RVLHRDLKPQNLLINTEGAI-KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 181
Query: 271 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI----------------SVADY--SF 312
+ D+WSLG + +++ + F +SE + I S+ DY SF
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 241
Query: 313 PPEQCGHIS--VP-----ARELIGQLLNTHADKRPTAGQLLQVAWFAEAS 355
P S VP R L+ Q+L+ +KR +A L +F + +
Sbjct: 242 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 94
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 95 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYI 153
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXXX---XXXXXXLPDLEFASPEMLTSPATAG 271
HS I H+D++P N+ +N LK++D G + + +PE++ +
Sbjct: 154 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 213
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHISV 307
+ D+WS+G ++ LL+G + F +D+ S E R +I
Sbjct: 214 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 273
Query: 308 ADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 274 LT-QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 322
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 94
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 95 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYI 153
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXXX---XXXXXXLPDLEFASPEMLTSPATAG 271
HS I H+D++P N+ +N LK++D G + + +PE++ +
Sbjct: 154 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 213
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHISV 307
+ D+WS+G ++ LL+G + F +D+ S E R +I
Sbjct: 214 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 273
Query: 308 ADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 274 LT-QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 322
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 131/290 (45%), Gaps = 39/290 (13%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTA 161
++++E++G G + V KAR++ TG++VALK+I + + + + +S L + P
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 162 LALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITE---SYICCIIRQLHSALHCLHSQ 218
+ L + +V + +H + ++ S +T I + QL L HS
Sbjct: 66 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 219 QIAHKDIRPENILMN--GAVLKLIDLGXXXX------XXXXXLPDLEFASPEMLTSPATA 270
++ H+D++P+N+L+N GA+ KL D G + L + +PE+L
Sbjct: 124 RVLHRDLKPQNLLINTEGAI-KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 182
Query: 271 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI----------------SVADY--SF 312
+ D+WSLG + +++ + F +SE + I S+ DY SF
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 242
Query: 313 PPEQCGHIS--VP-----ARELIGQLLNTHADKRPTAGQLLQVAWFAEAS 355
P S VP R L+ Q+L+ +KR +A L +F + +
Sbjct: 243 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 292
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTA 161
++++E++G G + V KAR++ TG++VALK+I + + + + +S L + P
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 162 LALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITE---SYICCIIRQLHSALHCLHSQ 218
+ L + +V + +H + ++ S +T I + QL L HS
Sbjct: 69 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 126
Query: 219 QIAHKDIRPENILMN--GAVLKLIDLGXXXX------XXXXXLPDLEFASPEMLTSPATA 270
++ H+D++P+N+L+N GA+ KL D G + L + +PE+L
Sbjct: 127 RVLHRDLKPQNLLINTEGAI-KLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 185
Query: 271 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI----------------SVADY--SF 312
+ D+WSLG + +++ + F +SE + I S+ DY SF
Sbjct: 186 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 245
Query: 313 PPEQCGHIS--VP-----ARELIGQLLNTHADKRPTAGQLLQVAWFAEAS 355
P S VP R L+ Q+L+ +KR +A L +F + +
Sbjct: 246 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 295
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 42 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 101
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 102 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYI 160
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXXX---XXXXXXLPDLEFASPEMLTSPATAG 271
HS I H+D++P N+ +N LK++D G + + +PE++ +
Sbjct: 161 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 220
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHISV 307
+ D+WS+G ++ LL+G + F +D+ S E R +I
Sbjct: 221 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 280
Query: 308 ADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 281 LT-QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 329
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 89 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYI 147
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXXXXX---XXXXLPDLEFASPEMLTSPATAG 271
HS I H+D++P N+ +N LK++D G + + +PE++ +
Sbjct: 148 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 207
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHISV 307
+ D+WS+G ++ LL+G + F +D+ S E R +I
Sbjct: 208 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 267
Query: 308 ADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 268 LT-QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 316
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 131/290 (45%), Gaps = 39/290 (13%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTA 161
++++E++G G + V KAR++ TG++VALK+I + + + + +S L + P
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 162 LALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITE---SYICCIIRQLHSALHCLHSQ 218
+ L + +V + +H + ++ S +T I + QL L HS
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 219 QIAHKDIRPENILMN--GAVLKLIDLGXXXX------XXXXXLPDLEFASPEMLTSPATA 270
++ H+D++P+N+L+N GA+ KL D G + L + +PE+L
Sbjct: 123 RVLHRDLKPQNLLINTEGAI-KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 181
Query: 271 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI----------------SVADY--SF 312
+ D+WSLG + +++ + F +SE + I S+ DY SF
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 241
Query: 313 PPEQCGHIS--VP-----ARELIGQLLNTHADKRPTAGQLLQVAWFAEAS 355
P S VP R L+ Q+L+ +KR +A L +F + +
Sbjct: 242 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 102
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 103 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYI 161
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXXX---XXXXXXLPDLEFASPEMLTSPATAG 271
HS I H+D++P N+ +N LK++D G + + +PE++ +
Sbjct: 162 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 221
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHISV 307
+ D+WS+G ++ LL+G + F +D+ S E R +I
Sbjct: 222 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 281
Query: 308 ADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 282 LT-QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 330
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 93
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 94 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYI 152
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXXX---XXXXXXLPDLEFASPEMLTSPATAG 271
HS I H+D++P N+ +N LK++D G + + +PE++ +
Sbjct: 153 HSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 212
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHISV 307
+ D+WS+G ++ LL+G + F +D+ S E R +I
Sbjct: 213 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 272
Query: 308 ADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 273 LT-QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 321
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXXX---XXXXXXLPDLEFASPEMLTSPATAG 271
HS I H+D++P N+ +N LK++D G + + +PE++ +
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHISV 307
+ D+WS+G ++ LL+G + F +D+ S E R +I
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 308 ADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 262 LT-QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 131/290 (45%), Gaps = 39/290 (13%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTA 161
++++E++G G + V KAR++ TG++VALK+I + + + + +S L + P
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 162 LALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITE---SYICCIIRQLHSALHCLHSQ 218
+ L + +V + +H + ++ S +T I + QL L HS
Sbjct: 67 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 219 QIAHKDIRPENILMN--GAVLKLIDLGXXXX------XXXXXLPDLEFASPEMLTSPATA 270
++ H+D++P+N+L+N GA+ KL D G + L + +PE+L
Sbjct: 125 RVLHRDLKPQNLLINTEGAI-KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 183
Query: 271 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI----------------SVADY--SF 312
+ D+WSLG + +++ + F +SE + I S+ DY SF
Sbjct: 184 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 243
Query: 313 PPEQCGHIS--VP-----ARELIGQLLNTHADKRPTAGQLLQVAWFAEAS 355
P S VP R L+ Q+L+ +KR +A L +F + +
Sbjct: 244 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 293
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 85 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYI 143
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXXX---XXXXXXLPDLEFASPEMLTSPATAG 271
HS I H+D++P N+ +N LK++D G + + +PE++ +
Sbjct: 144 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 203
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHISV 307
+ D+WS+G ++ LL+G + F +D+ S E R +I
Sbjct: 204 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 263
Query: 308 ADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 264 LT-QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 312
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 131/290 (45%), Gaps = 39/290 (13%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTA 161
++++E++G G + V KAR++ TG++VALK+I + + + + +S L + P
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 162 LALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITE---SYICCIIRQLHSALHCLHSQ 218
+ L + +V + +H + ++ S +T I + QL L HS
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 219 QIAHKDIRPENILMN--GAVLKLIDLGXXXX------XXXXXLPDLEFASPEMLTSPATA 270
++ H+D++P+N+L+N GA+ KL D G + L + +PE+L
Sbjct: 122 RVLHRDLKPQNLLINTEGAI-KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 180
Query: 271 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI----------------SVADY--SF 312
+ D+WSLG + +++ + F +SE + I S+ DY SF
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 240
Query: 313 PPEQCGHIS--VP-----ARELIGQLLNTHADKRPTAGQLLQVAWFAEAS 355
P S VP R L+ Q+L+ +KR +A L +F + +
Sbjct: 241 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 105
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 106 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYI 164
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXXX---XXXXXXLPDLEFASPEMLTSPATAG 271
HS I H+D++P N+ +N LK++D G + + +PE++ +
Sbjct: 165 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 224
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHISV 307
+ D+WS+G ++ LL+G + F +D+ S E R +I
Sbjct: 225 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 284
Query: 308 ADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 285 LT-QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 333
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 131/290 (45%), Gaps = 39/290 (13%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTA 161
++++E++G G + V KAR++ TG++VALK+I + + + + +S L + P
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 162 LALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITE---SYICCIIRQLHSALHCLHSQ 218
+ L + +V + +H + ++ S +T I + QL L HS
Sbjct: 68 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 219 QIAHKDIRPENILMN--GAVLKLIDLGXXXX------XXXXXLPDLEFASPEMLTSPATA 270
++ H+D++P+N+L+N GA+ KL D G + L + +PE+L
Sbjct: 126 RVLHRDLKPQNLLINTEGAI-KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 271 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI----------------SVADY--SF 312
+ D+WSLG + +++ + F +SE + I S+ DY SF
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 244
Query: 313 PPEQCGHIS--VP-----ARELIGQLLNTHADKRPTAGQLLQVAWFAEAS 355
P S VP R L+ Q+L+ +KR +A L +F + +
Sbjct: 245 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 131/290 (45%), Gaps = 39/290 (13%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTA 161
++++E++G G + V KAR++ TG++VALK+I + + + + +S L + P
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 162 LALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITE---SYICCIIRQLHSALHCLHSQ 218
+ L + +V + +H + ++ S +T I + QL L HS
Sbjct: 67 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 219 QIAHKDIRPENILMN--GAVLKLIDLGXXXX------XXXXXLPDLEFASPEMLTSPATA 270
++ H+D++P+N+L+N GA+ KL D G + L + +PE+L
Sbjct: 125 RVLHRDLKPQNLLINTEGAI-KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 183
Query: 271 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI----------------SVADY--SF 312
+ D+WSLG + +++ + F +SE + I S+ DY SF
Sbjct: 184 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 243
Query: 313 PPEQCGHIS--VP-----ARELIGQLLNTHADKRPTAGQLLQVAWFAEAS 355
P S VP R L+ Q+L+ +KR +A L +F + +
Sbjct: 244 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 293
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 106/245 (43%), Gaps = 12/245 (4%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRAEYNLLSTLMHAHI 158
++E ++ LG G F V + + TG A+K + +++ + +QI N L +
Sbjct: 35 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 93
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + L + +VM+ V G + HL R +E + Q+ LHS
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 153
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLP---DLEFASPEMLTSPATAGPST 274
+ ++D++PEN+L++ +++ D G E+ +PE++ S +
Sbjct: 154 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY-NKAV 212
Query: 275 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 334
D W+LGVL+Y + +G PF + + I FP H S ++L+ LL
Sbjct: 213 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQV 268
Query: 335 HADKR 339
KR
Sbjct: 269 DLTKR 273
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 131/290 (45%), Gaps = 39/290 (13%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTA 161
++++E++G G + V KAR++ TG++VALK+I + + + + +S L + P
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 162 LALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITE---SYICCIIRQLHSALHCLHSQ 218
+ L + +V + +H + ++ S +T I + QL L HS
Sbjct: 66 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 219 QIAHKDIRPENILMN--GAVLKLIDLGXXXX------XXXXXLPDLEFASPEMLTSPATA 270
++ H+D++P+N+L+N GA+ KL D G + L + +PE+L
Sbjct: 124 RVLHRDLKPQNLLINTEGAI-KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 182
Query: 271 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI----------------SVADY--SF 312
+ D+WSLG + +++ + F +SE + I S+ DY SF
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 242
Query: 313 PPEQCGHIS--VP-----ARELIGQLLNTHADKRPTAGQLLQVAWFAEAS 355
P S VP R L+ Q+L+ +KR +A L +F + +
Sbjct: 243 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 292
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 109/254 (42%), Gaps = 32/254 (12%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALKQIPRERQPQ----QITRAEYNLLSTL--------MH 155
LG G F V A +GT +L A+K + ++ Q + T E +L+ L +H
Sbjct: 27 LGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQLH 86
Query: 156 AHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ T L+ VM+ V+G L+ H+ + E ++ L L
Sbjct: 87 SCFQTVDRLY----------FVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFL 136
Query: 216 HSQQIAHKDIRPENILMNG-AVLKLIDLGXXXXXXXXXLPDLEF-ASPEMLTSPATA--- 270
H + I ++D++ +N++++ +K+ D G + EF +P+ + A
Sbjct: 137 HKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQP 196
Query: 271 -GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIG 329
G S D W+ GVLLY +L+G PF E E+E I + S+P +S A +
Sbjct: 197 YGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKS----LSKEAVSICK 252
Query: 330 QLLNTHADKRPTAG 343
L+ H KR G
Sbjct: 253 GLMTKHPAKRLGCG 266
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 131/290 (45%), Gaps = 39/290 (13%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTA 161
++++E++G G + V KAR++ TG++VALK+I + + + + +S L + P
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 162 LALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITE---SYICCIIRQLHSALHCLHSQ 218
+ L + +V + +H + ++ S +T I + QL L HS
Sbjct: 68 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 219 QIAHKDIRPENILMN--GAVLKLIDLGXXXX------XXXXXLPDLEFASPEMLTSPATA 270
++ H+D++P+N+L+N GA+ KL D G + L + +PE+L
Sbjct: 126 RVLHRDLKPQNLLINTEGAI-KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 271 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI----------------SVADY--SF 312
+ D+WSLG + +++ + F +SE + I S+ DY SF
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 244
Query: 313 PPEQCGHIS--VP-----ARELIGQLLNTHADKRPTAGQLLQVAWFAEAS 355
P S VP R L+ Q+L+ +KR +A L +F + +
Sbjct: 245 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXXX---XXXXXXLPDLEFASPEMLTSPATAG 271
HS I H+D++P N+ +N LK++D G + + +PE++ +
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHISV 307
+ D+WS+G ++ LL+G + F +D+ S E R +I
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 308 ADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 262 LT-QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 131/290 (45%), Gaps = 39/290 (13%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTA 161
++++E++G G + V KAR++ TG++VALK+I + + + + +S L + P
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 162 LALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITE---SYICCIIRQLHSALHCLHSQ 218
+ L + +V + +H + ++ S +T I + QL L HS
Sbjct: 69 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 126
Query: 219 QIAHKDIRPENILMN--GAVLKLIDLGXXXX------XXXXXLPDLEFASPEMLTSPATA 270
++ H+D++P+N+L+N GA+ KL D G + L + +PE+L
Sbjct: 127 RVLHRDLKPQNLLINTEGAI-KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 185
Query: 271 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI----------------SVADY--SF 312
+ D+WSLG + +++ + F +SE + I S+ DY SF
Sbjct: 186 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 245
Query: 313 PPEQCGHIS--VP-----ARELIGQLLNTHADKRPTAGQLLQVAWFAEAS 355
P S VP R L+ Q+L+ +KR +A L +F + +
Sbjct: 246 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 295
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 130/288 (45%), Gaps = 39/288 (13%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTA 161
++++E++G G + V KAR++ TG++VALK+I + + + + +S L + P
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 162 LALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITE---SYICCIIRQLHSALHCLHSQ 218
+ L + +V + +H + ++ S +T I + QL L HS
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 219 QIAHKDIRPENILMN--GAVLKLIDLGXXXX------XXXXXLPDLEFASPEMLTSPATA 270
++ H+D++P+N+L+N GA+ KL D G + L + +PE+L
Sbjct: 123 RVLHRDLKPQNLLINTEGAI-KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 181
Query: 271 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI----------------SVADY--SF 312
+ D+WSLG + +++ + F +SE + I S+ DY SF
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 241
Query: 313 PPEQCGHIS--VP-----ARELIGQLLNTHADKRPTAGQLLQVAWFAE 353
P S VP R L+ Q+L+ +KR +A L +F +
Sbjct: 242 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 106/245 (43%), Gaps = 12/245 (4%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRAEYNLLSTLMHAHI 158
++E ++ LG G F V + + TG A+K + +++ + +QI N L +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 101
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + L + +VM+ V G + HL R +E + Q+ LHS
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLP---DLEFASPEMLTSPATAGPST 274
+ ++D++PEN+L++ +++ D G E+ +PE++ S +
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY-NKAV 220
Query: 275 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 334
D W+LGVL+Y + +G PF + + I FP H S ++L+ LL
Sbjct: 221 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQV 276
Query: 335 HADKR 339
KR
Sbjct: 277 DLTKR 281
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 110/256 (42%), Gaps = 13/256 (5%)
Query: 99 EHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHI 158
E + +LE++G G F V K D T ++VA+K I E +I + + + L
Sbjct: 6 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEI-TVLSQCDS 64
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + + I+M+ + G S + L + E+ I I+R++ L LHS+
Sbjct: 65 PYVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSE 123
Query: 219 QIAHKDIRPENILMN--GAVLKLIDLGXXXXXXXXXLPDLEFASPEMLTSPATAGPS--- 273
+ H+DI+ N+L++ G V KL D G + F +P S
Sbjct: 124 KKIHRDIKAANVLLSEHGEV-KLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYD 182
Query: 274 --TDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQL 331
D+WSLG+ L G P SE + + + PP G+ S P +E +
Sbjct: 183 SKADIWSLGITAIELARGEPP---HSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEAC 239
Query: 332 LNTHADKRPTAGQLLQ 347
LN RPTA +LL+
Sbjct: 240 LNKEPSFRPTAKELLK 255
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 110/256 (42%), Gaps = 13/256 (5%)
Query: 99 EHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHI 158
E + +LE++G G F V K D T ++VA+K I E +I + + + L
Sbjct: 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEI-TVLSQCDS 79
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + + I+M+ + G S + L + E+ I I+R++ L LHS+
Sbjct: 80 PYVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSE 138
Query: 219 QIAHKDIRPENILMN--GAVLKLIDLGXXXXXXXXXLPDLEFASPEMLTSPATAGPS--- 273
+ H+DI+ N+L++ G V KL D G + F +P S
Sbjct: 139 KKIHRDIKAANVLLSEHGEV-KLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYD 197
Query: 274 --TDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQL 331
D+WSLG+ L G P SE + + + PP G+ S P +E +
Sbjct: 198 SKADIWSLGITAIELARGEPP---HSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEAC 254
Query: 332 LNTHADKRPTAGQLLQ 347
LN RPTA +LL+
Sbjct: 255 LNKEPSFRPTAKELLK 270
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 106/245 (43%), Gaps = 12/245 (4%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRAEYNLLSTLMHAHI 158
++E ++ LG G F V + + TG A+K + +++ + +QI N L +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 101
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + L + +VM+ V G + HL R +E + Q+ LHS
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLP---DLEFASPEMLTSPATAGPST 274
+ ++D++PEN+L++ +++ D G E+ +PE++ S +
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY-NKAV 220
Query: 275 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 334
D W+LGVL+Y + +G PF + + I FP H S ++L+ LL
Sbjct: 221 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQV 276
Query: 335 HADKR 339
KR
Sbjct: 277 DLTKR 281
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 114/257 (44%), Gaps = 15/257 (5%)
Query: 99 EHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHI 158
E + +LE++G G F V K D T ++VA+K I E +I + + + L
Sbjct: 6 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEI-TVLSQCDS 64
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + + I+M+ + G S + L + E+ I I+R++ L LHS+
Sbjct: 65 PYVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSE 123
Query: 219 QIAHKDIRPENILMN--GAVLKLIDLGXXXXXXXXXLPDLEFA------SPEMLTSPATA 270
+ H+DI+ N+L++ G V KL D G + F +PE++ A
Sbjct: 124 KKIHRDIKAANVLLSEHGEV-KLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYD 182
Query: 271 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 330
+ D+WSLG+ L G P SE + + + PP G+ S P +E +
Sbjct: 183 SKA-DIWSLGITAIELARGEPP---HSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEA 238
Query: 331 LLNTHADKRPTAGQLLQ 347
LN RPTA +LL+
Sbjct: 239 CLNKEPSFRPTAKELLK 255
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 106/245 (43%), Gaps = 12/245 (4%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRAEYNLLSTLMHAHI 158
++E ++ LG G F V + + TG A+K + +++ + +QI N L +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 101
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + L + +VM+ V G + HL R +E + Q+ LHS
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLP---DLEFASPEMLTSPATAGPST 274
+ ++D++PEN+L++ +++ D G E+ +PE++ S +
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY-NKAV 220
Query: 275 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 334
D W+LGVL+Y + +G PF + + I FP H S ++L+ LL
Sbjct: 221 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQV 276
Query: 335 HADKR 339
KR
Sbjct: 277 DLTKR 281
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 131/290 (45%), Gaps = 39/290 (13%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTA 161
++++E++G G + V KAR++ TG++VALK+I + + + + +S L + P
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 162 LALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITE---SYICCIIRQLHSALHCLHSQ 218
+ L + +V + +H + ++ S +T I + QL L HS
Sbjct: 68 VKLLDVIHTENKLYLVFEFLHQD--LKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 219 QIAHKDIRPENILMN--GAVLKLIDLGXXXX------XXXXXLPDLEFASPEMLTSPATA 270
++ H+D++P+N+L+N GA+ KL D G + L + +PE+L
Sbjct: 126 RVLHRDLKPQNLLINTEGAI-KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 271 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI----------------SVADY--SF 312
+ D+WSLG + +++ + F +SE + I S+ DY SF
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 244
Query: 313 PPEQCGHIS--VP-----ARELIGQLLNTHADKRPTAGQLLQVAWFAEAS 355
P S VP R L+ Q+L+ +KR +A L +F + +
Sbjct: 245 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXXX---XXXXXXLPDLEFASPEMLTSPATAG 271
HS I H+D++P N+ +N LK++D G + + +PE++ +
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHISV 307
+ D+WS+G ++ LL+G + F +D+ S E R +I
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 308 ADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 262 LT-QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTA 161
++++E++G G + V KAR++ TG++VALK+I + + + + +S L + P
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 162 LALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITE---SYICCIIRQLHSALHCLHSQ 218
+ L + +V + VH + ++ S +T I + QL L HS
Sbjct: 64 VKLLDVIHTENKLYLVFEHVHQD--LKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 219 QIAHKDIRPENILMN--GAVLKLIDLGXXXX------XXXXXLPDLEFASPEMLTSPATA 270
++ H+D++P+N+L+N GA+ KL D G + L + +PE+L
Sbjct: 122 RVLHRDLKPQNLLINTEGAI-KLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 271 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI----------------SVADY--SF 312
+ D+WSLG + +++ + F +SE + I S+ DY SF
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 240
Query: 313 PPEQCGHIS--VP-----ARELIGQLLNTHADKRPTAGQLLQVAWFAEAS 355
P S VP R L+ Q+L+ +KR +A L +F + +
Sbjct: 241 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 114/257 (44%), Gaps = 15/257 (5%)
Query: 99 EHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHI 158
E + +LE++G G F V K D T ++VA+K I E +I + + + L
Sbjct: 26 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEI-TVLSQCDS 84
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + + I+M+ + G S + L + E+ I I+R++ L LHS+
Sbjct: 85 PYVTKYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGPLDETQIATILREILKGLDYLHSE 143
Query: 219 QIAHKDIRPENILMN--GAVLKLIDLGXXXXXXXXXLPDLEFA------SPEMLTSPATA 270
+ H+DI+ N+L++ G V KL D G + F +PE++ A
Sbjct: 144 KKIHRDIKAANVLLSEHGEV-KLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYD 202
Query: 271 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 330
+ D+WSLG+ L G P SE + + + PP G+ S P +E +
Sbjct: 203 SKA-DIWSLGITAIELARGEPP---HSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEA 258
Query: 331 LLNTHADKRPTAGQLLQ 347
LN RPTA +LL+
Sbjct: 259 CLNKEPSFRPTAKELLK 275
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 105/245 (42%), Gaps = 12/245 (4%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRAEYNLLSTLMHAHI 158
++E ++ LG G F V + + TG A+K + +++ + +QI N L +
Sbjct: 35 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 93
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + L + +VM+ V G + HL R E + Q+ LHS
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 153
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLP---DLEFASPEMLTSPATAGPST 274
+ ++D++PEN+L++ +++ D G E+ +PE++ S +
Sbjct: 154 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY-NKAV 212
Query: 275 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 334
D W+LGVL+Y + +G PF + + I FP H S ++L+ LL
Sbjct: 213 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQV 268
Query: 335 HADKR 339
KR
Sbjct: 269 DLTKR 273
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 18/210 (8%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQI---PRERQP--QQITRAEYNLLSTLMH 155
RY+ +++LG G TV A D VA+K I PRE++ ++ R +N S L H
Sbjct: 12 RYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNS-SQLSH 70
Query: 156 AHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+I + + + E +VM+ + G +L +++ ++ Q+ +
Sbjct: 71 QNIVSMIDVDEEDDCY---YLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHA 127
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLPD-------LEFASPEMLTSP 267
H +I H+DI+P+NIL++ LK+ D G L +++ SPE
Sbjct: 128 HDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGE 187
Query: 268 ATAGPSTDMWSLGVLLYILLSGVSPFLDES 297
AT TD++S+G++LY +L G PF E+
Sbjct: 188 AT-DECTDIYSIGIVLYEMLVGEPPFNGET 216
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 106/245 (43%), Gaps = 12/245 (4%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRAEYNLLSTLMHAHI 158
++E ++ LG G F V + + TG A+K + +++ + +QI N L +
Sbjct: 63 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 121
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + L + +VM+ V G + HL R +E + Q+ LHS
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 181
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXL---PDLEFASPEMLTSPATAGPST 274
+ ++D++PEN+L++ +++ D G E+ +PE++ S +
Sbjct: 182 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY-NKAV 240
Query: 275 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 334
D W+LGVL+Y + +G PF + + I FP H S ++L+ LL
Sbjct: 241 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQV 296
Query: 335 HADKR 339
KR
Sbjct: 297 DLTKR 301
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 117/267 (43%), Gaps = 19/267 (7%)
Query: 99 EHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIP--RERQPQQITRAEYNLLSTLMHA 156
E + +LER+G G F V K D T Q+VA+K I + + E +LS +
Sbjct: 22 EELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSS 81
Query: 157 HIPTALALFENAPVPGTDT-IVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
++ + + + G+ I+M+ + G S + L R E I +++++ L L
Sbjct: 82 YVTK----YYGSYLKGSKLWIIMEYLGGGSALD-LLRAGPFDEFQIATMLKEILKGLDYL 136
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLPDLEFA------SPEMLTSPA 268
HS++ H+DI+ N+L++ +KL D G + F +PE++ A
Sbjct: 137 HSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSA 196
Query: 269 TAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELI 328
+ D+WSLG+ L G P S+ + + + PP G + +E I
Sbjct: 197 YDSKA-DIWSLGITAIELAKGEPP---NSDMHPMRVLFLIPKNNPPTLVGDFTKSFKEFI 252
Query: 329 GQLLNTHADKRPTAGQLLQVAWFAEAS 355
LN RPTA +LL+ + + S
Sbjct: 253 DACLNKDPSFRPTAKELLKHKFIVKNS 279
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXXX---XXXXXXLPDLEFASPEMLTSPATAG 271
HS I H+D++P N+ +N LK++D G + + +PE++ +
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHISV 307
+ D+WS+G ++ LL+G + F +D+ S E R +I
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 308 ADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 262 LT-QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ + Q + T E LL + H +
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHEN 94
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 95 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYI 153
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXXX---XXXXXXLPDLEFASPEMLTSPATAG 271
HS I H+D++P N+ +N LK++D G + + +PE++ +
Sbjct: 154 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 213
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHISV 307
+ D+WS+G ++ LL+G + F +D+ S E R +I
Sbjct: 214 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 273
Query: 308 ADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 274 LT-QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 322
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 105/245 (42%), Gaps = 12/245 (4%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRAEYNLLSTLMHAHI 158
++E ++ LG G F V + TG A+K + +++ + +QI N L +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 100
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + L + +VM+ V G + HL R +E + Q+ LHS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLP---DLEFASPEMLTSPATAGPST 274
+ ++D++PEN+L++ +++ D G E+ +PE++ S +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY-NKAV 219
Query: 275 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 334
D W+LGVL+Y + +G PF + + I FP H S ++L+ LL
Sbjct: 220 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQV 275
Query: 335 HADKR 339
KR
Sbjct: 276 DLTKR 280
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 105/245 (42%), Gaps = 12/245 (4%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRAEYNLLSTLMHAHI 158
++E ++ LG G F V + + TG A+K + +++ + +QI N L +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 101
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + L + +VM+ G + HL R +E + Q+ LHS
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLP---DLEFASPEMLTSPATAGPST 274
+ ++D++PEN++++ +K+ D G E+ +PE++ S +
Sbjct: 162 DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY-NKAV 220
Query: 275 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 334
D W+LGVL+Y + +G PF + + I FP H S ++L+ LL
Sbjct: 221 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQV 276
Query: 335 HADKR 339
KR
Sbjct: 277 DLTKR 281
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 105/245 (42%), Gaps = 12/245 (4%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRAEYNLLSTLMHAHI 158
++E ++ +G G F V + TG A+K + +++ + +QI N L +
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 100
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + L + +VM+ V G + HL R +E + Q+ LHS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLP---DLEFASPEMLTSPATAGPST 274
+ ++D++PEN+L++ +K+ D G E+ +PE++ S +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY-NKAV 219
Query: 275 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 334
D W+LGVL+Y + +G PF + + I FP H S ++L+ LL
Sbjct: 220 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQV 275
Query: 335 HADKR 339
KR
Sbjct: 276 DLTKR 280
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 99/215 (46%), Gaps = 13/215 (6%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQI---PRERQPQQITRAEYNLLSTLMHAH 157
+YE L +G G + V K R++ TG++VA+K+ ++ ++I E LL L H +
Sbjct: 26 KYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHEN 85
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHS 217
+ + L E +V + V L + + + + Q+ + + HS
Sbjct: 86 L---VNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHS 142
Query: 218 QQIAHKDIRPENILMN-GAVLKLIDLGXXXXXXX-XXLPDLEFAS-----PEMLTSPATA 270
I H+DI+PENIL++ V+KL D G + D E A+ PE+L
Sbjct: 143 HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKY 202
Query: 271 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI 305
G + D+W++G L+ + G F +S+ + HI
Sbjct: 203 GKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHI 237
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 105/245 (42%), Gaps = 12/245 (4%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRAEYNLLSTLMHAHI 158
++E ++ LG G F V + TG A+K + +++ + +QI N L +
Sbjct: 28 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 86
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + L + +VM+ V G + HL R +E + Q+ LHS
Sbjct: 87 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 146
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLP---DLEFASPEMLTSPATAGPST 274
+ ++D++PEN+L++ +++ D G E+ +PE++ S +
Sbjct: 147 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGY-NKAV 205
Query: 275 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 334
D W+LGVL+Y + +G PF + + I FP H S ++L+ LL
Sbjct: 206 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQV 261
Query: 335 HADKR 339
KR
Sbjct: 262 DLTKR 266
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXXX---XXXXXXLPDLEFASPEMLTSPATAG 271
HS I H+D++P N+ +N LK++D G + + +PE++ +
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHISV 307
+ D+WS+G ++ LL+G + F +D+ S E R +I
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 308 ADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 262 LT-QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 97/201 (48%), Gaps = 10/201 (4%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPT 160
+Y++LE++G G + V KA+D G++VALK+I + + + I +S L H P
Sbjct: 22 KYQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 161 ALALFENAPVPGTDTIVMQLVHGESLIQHLCRQST-ITESYICCIIRQLHSALHCLHSQQ 219
++L + T+V + + + L + L T + +S I + QL + H +
Sbjct: 81 IVSLIDVIHSERCLTLVFEFME-KDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR 139
Query: 220 IAHKDIRPENILMNG-AVLKLIDLGXXXX------XXXXXLPDLEFASPEMLTSPATAGP 272
I H+D++P+N+L+N LKL D G + L + +P++L
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYST 199
Query: 273 STDMWSLGVLLYILLSGVSPF 293
S D+WS+G + +++G F
Sbjct: 200 SVDIWSIGCIFAEMITGKPLF 220
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 108/248 (43%), Gaps = 23/248 (9%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLL----STLMHAH 157
YE ++ +G G F V+ R + T ++ A+K + + + I R++ + A+
Sbjct: 71 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSK---FEMIKRSDSAFFWEERDIMAFAN 127
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHS 217
P + LF +VM+ + G L+ +L + E + ++ AL +HS
Sbjct: 128 SPWVVQLFYAFQDDRYLYMVMEYMPGGDLV-NLMSNYDVPEKWARFYTAEVVLALDAIHS 186
Query: 218 QQIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXL---------PDLEFASPEMLTS- 266
H+D++P+N+L++ + LKL D G + PD + SPE+L S
Sbjct: 187 MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPD--YISPEVLKSQ 244
Query: 267 --PATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPA 324
G D WS+GV LY +L G +PF +S T + I S IS A
Sbjct: 245 GGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEA 304
Query: 325 RELIGQLL 332
+ LI L
Sbjct: 305 KNLICAFL 312
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 97/201 (48%), Gaps = 10/201 (4%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPT 160
+Y++LE++G G + V KA+D G++VALK+I + + + I +S L H P
Sbjct: 22 KYQKLEKVGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 161 ALALFENAPVPGTDTIVMQLVHGESLIQHLCRQST-ITESYICCIIRQLHSALHCLHSQQ 219
++L + T+V + + + L + L T + +S I + QL + H +
Sbjct: 81 IVSLIDVIHSERCLTLVFEFME-KDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR 139
Query: 220 IAHKDIRPENILMNG-AVLKLIDLGXXXX------XXXXXLPDLEFASPEMLTSPATAGP 272
I H+D++P+N+L+N LKL D G + L + +P++L
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYST 199
Query: 273 STDMWSLGVLLYILLSGVSPF 293
S D+WS+G + +++G F
Sbjct: 200 SVDIWSIGCIFAEMITGKPLF 220
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 119/270 (44%), Gaps = 25/270 (9%)
Query: 100 HRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRE----RQPQQITRAEYNLLSTLMH 155
+ +E L+ LG G F V +++ TG+ A+K + +E + T E +L H
Sbjct: 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 207
Query: 156 AHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
P AL + VM+ +G L HL R+ +E ++ SAL L
Sbjct: 208 ---PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYL 264
Query: 216 HSQQ-IAHKDIRPENILMN-GAVLKLIDLG------XXXXXXXXXLPDLEFASPEMLTSP 267
HS++ + ++D++ EN++++ +K+ D G E+ +PE+L
Sbjct: 265 HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLED- 323
Query: 268 ATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAREL 327
G + D W LGV++Y ++ G PF ++ E+ I + + FP + A+ L
Sbjct: 324 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT----LGPEAKSL 379
Query: 328 IGQLLNTHADKRPTAG-----QLLQVAWFA 352
+ LL +R G +++Q +FA
Sbjct: 380 LSGLLKKDPKQRLGGGSEDAKEIMQHRFFA 409
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 104/236 (44%), Gaps = 23/236 (9%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQI---TRAEYNLLSTLMHAH 157
+YE+L ++G G F V KAR R TGQ VALK++ E + + E +L L H +
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 158 IPTALALFENAPVP-----GTDTIVMQLVHGE--SLIQHLCRQSTITESYICCIIRQLHS 210
+ + + P G+ +V + L+ ++ + T++E I +++ L +
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE--IKRVMQMLLN 136
Query: 211 ALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXX----------LPDLEFA 259
L+ +H +I H+D++ N+L+ VLKL D G + L +
Sbjct: 137 GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 196
Query: 260 SPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPE 315
PE+L GP D+W G ++ + + +E+ A IS S PE
Sbjct: 197 PPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 252
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 120/270 (44%), Gaps = 25/270 (9%)
Query: 100 HRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRE----RQPQQITRAEYNLLSTLMH 155
+ +E L+ LG G F V +++ TG+ A+K + +E + T E +L H
Sbjct: 8 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 67
Query: 156 AHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
P AL + VM+ +G L HL R+ +E ++ SAL L
Sbjct: 68 ---PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYL 124
Query: 216 HSQQ-IAHKDIRPENILMN-GAVLKLIDLG------XXXXXXXXXLPDLEFASPEMLTSP 267
HS++ + ++D++ EN++++ +K+ D G E+ +PE+L
Sbjct: 125 HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLED- 183
Query: 268 ATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAREL 327
G + D W LGV++Y ++ G PF ++ E+ I + + FP + A+ L
Sbjct: 184 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT----LGPEAKSL 239
Query: 328 IGQLLNTHADKRPTAG-----QLLQVAWFA 352
+ LL +R G +++Q +FA
Sbjct: 240 LSGLLKKDPKQRLGGGSEDAKEIMQHRFFA 269
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 119/270 (44%), Gaps = 25/270 (9%)
Query: 100 HRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRE----RQPQQITRAEYNLLSTLMH 155
+ +E L+ LG G F V +++ TG+ A+K + +E + T E +L H
Sbjct: 151 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 210
Query: 156 AHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
P AL + VM+ +G L HL R+ +E ++ SAL L
Sbjct: 211 ---PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYL 267
Query: 216 HSQQ-IAHKDIRPENILMN-GAVLKLIDLG------XXXXXXXXXLPDLEFASPEMLTSP 267
HS++ + ++D++ EN++++ +K+ D G E+ +PE+L
Sbjct: 268 HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLED- 326
Query: 268 ATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAREL 327
G + D W LGV++Y ++ G PF ++ E+ I + + FP + A+ L
Sbjct: 327 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT----LGPEAKSL 382
Query: 328 IGQLLNTHADKRPTAG-----QLLQVAWFA 352
+ LL +R G +++Q +FA
Sbjct: 383 LSGLLKKDPKQRLGGGSEDAKEIMQHRFFA 412
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 108/248 (43%), Gaps = 23/248 (9%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLL----STLMHAH 157
YE ++ +G G F V+ R + T ++ A+K + + + I R++ + A+
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSK---FEMIKRSDSAFFWEERDIMAFAN 132
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHS 217
P + LF +VM+ + G L+ +L + E + ++ AL +HS
Sbjct: 133 SPWVVQLFYAFQDDRYLYMVMEYMPGGDLV-NLMSNYDVPEKWARFYTAEVVLALDAIHS 191
Query: 218 QQIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXL---------PDLEFASPEMLTS- 266
H+D++P+N+L++ + LKL D G + PD + SPE+L S
Sbjct: 192 MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPD--YISPEVLKSQ 249
Query: 267 --PATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPA 324
G D WS+GV LY +L G +PF +S T + I S IS A
Sbjct: 250 GGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEA 309
Query: 325 RELIGQLL 332
+ LI L
Sbjct: 310 KNLICAFL 317
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 108/248 (43%), Gaps = 23/248 (9%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLL----STLMHAH 157
YE ++ +G G F V+ R + T ++ A+K + + + I R++ + A+
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSK---FEMIKRSDSAFFWEERDIMAFAN 132
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHS 217
P + LF +VM+ + G L+ +L + E + ++ AL +HS
Sbjct: 133 SPWVVQLFYAFQDDRYLYMVMEYMPGGDLV-NLMSNYDVPEKWARFYTAEVVLALDAIHS 191
Query: 218 QQIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXL---------PDLEFASPEMLTS- 266
H+D++P+N+L++ + LKL D G + PD + SPE+L S
Sbjct: 192 MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPD--YISPEVLKSQ 249
Query: 267 --PATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPA 324
G D WS+GV LY +L G +PF +S T + I S IS A
Sbjct: 250 GGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEA 309
Query: 325 RELIGQLL 332
+ LI L
Sbjct: 310 KNLICAFL 317
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 118/270 (43%), Gaps = 28/270 (10%)
Query: 85 YTVPFETRWQQEQFEHR--YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQI 142
+ PF T+ +E HR +E ++ +G G F V + + T ++ A+K + + + +
Sbjct: 58 WAKPF-TQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKIL---NKWEML 113
Query: 143 TRAEYNLL----STLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR-QSTIT 197
RAE L++ AL +VM G L+ L + + +
Sbjct: 114 KRAETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLP 173
Query: 198 ESYICCIIRQLHSALHCLHSQQIAHKDIRPENILMN----------GAVLKLIDLGXXXX 247
E I ++ A+ +H H+DI+P+N+L++ G+ LK+ D G
Sbjct: 174 EDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQS 233
Query: 248 XXXXXLPDLEFASPEMLTSP----ATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRA 303
PD + SPE+L + GP D WSLGV +Y +L G +PF ES ET
Sbjct: 234 SVAVGTPD--YISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYG 291
Query: 304 HISVADYSFP-PEQCGHISVPARELIGQLL 332
I + F P +S A++LI +L+
Sbjct: 292 KIMNHEERFQFPSHVTDVSEEAKDLIQRLI 321
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 118/270 (43%), Gaps = 28/270 (10%)
Query: 85 YTVPFETRWQQEQFEHR--YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQI 142
+ PF T+ +E HR +E ++ +G G F V + + T ++ A+K + + + +
Sbjct: 74 WAKPF-TQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKIL---NKWEML 129
Query: 143 TRAEYNLL----STLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR-QSTIT 197
RAE L++ AL +VM G L+ L + + +
Sbjct: 130 KRAETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLP 189
Query: 198 ESYICCIIRQLHSALHCLHSQQIAHKDIRPENILMN----------GAVLKLIDLGXXXX 247
E I ++ A+ +H H+DI+P+N+L++ G+ LK+ D G
Sbjct: 190 EDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQS 249
Query: 248 XXXXXLPDLEFASPEMLTSP----ATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRA 303
PD + SPE+L + GP D WSLGV +Y +L G +PF ES ET
Sbjct: 250 SVAVGTPD--YISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYG 307
Query: 304 HISVADYSFP-PEQCGHISVPARELIGQLL 332
I + F P +S A++LI +L+
Sbjct: 308 KIMNHEERFQFPSHVTDVSEEAKDLIQRLI 337
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 120/270 (44%), Gaps = 25/270 (9%)
Query: 100 HRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRE----RQPQQITRAEYNLLSTLMH 155
+ +E L+ LG G F V +++ TG+ A+K + +E + T E +L H
Sbjct: 9 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 68
Query: 156 AHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
P AL + VM+ +G L HL R+ +E ++ SAL L
Sbjct: 69 ---PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYL 125
Query: 216 HSQQ-IAHKDIRPENILMN-GAVLKLIDLG------XXXXXXXXXLPDLEFASPEMLTSP 267
HS++ + ++D++ EN++++ +K+ D G E+ +PE+L
Sbjct: 126 HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLED- 184
Query: 268 ATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAREL 327
G + D W LGV++Y ++ G PF ++ E+ I + + FP + A+ L
Sbjct: 185 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT----LGPEAKSL 240
Query: 328 IGQLLNTHADKRPTAG-----QLLQVAWFA 352
+ LL +R G +++Q +FA
Sbjct: 241 LSGLLKKDPKQRLGGGSEDAKEIMQHRFFA 270
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 120/270 (44%), Gaps = 25/270 (9%)
Query: 100 HRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRE----RQPQQITRAEYNLLSTLMH 155
+ +E L+ LG G F V +++ TG+ A+K + +E + T E +L H
Sbjct: 10 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 69
Query: 156 AHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
P AL + VM+ +G L HL R+ +E ++ SAL L
Sbjct: 70 ---PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYL 126
Query: 216 HSQQ-IAHKDIRPENILMN-GAVLKLIDLG------XXXXXXXXXLPDLEFASPEMLTSP 267
HS++ + ++D++ EN++++ +K+ D G E+ +PE+L
Sbjct: 127 HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLED- 185
Query: 268 ATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAREL 327
G + D W LGV++Y ++ G PF ++ E+ I + + FP + A+ L
Sbjct: 186 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT----LGPEAKSL 241
Query: 328 IGQLLNTHADKRPTAG-----QLLQVAWFA 352
+ LL +R G +++Q +FA
Sbjct: 242 LSGLLKKDPKQRLGGGSEDAKEIMQHRFFA 271
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 132/293 (45%), Gaps = 45/293 (15%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRA---EYNLLSTLMHAHI 158
++++E++G G + V KAR++ TG++VALK+I + + + + E +LL L H +I
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITE---SYICCIIRQLHSALHCL 215
L + + + + H + ++ S +T I + QL L
Sbjct: 68 VKLLDVIHTE-----NKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 216 HSQQIAHKDIRPENILMN--GAVLKLIDLGXXXX------XXXXXLPDLEFASPEMLTSP 267
HS ++ H+D++P+N+L+N GA+ KL D G + L + +PE+L
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAI-KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGC 181
Query: 268 ATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI----------------SVADY- 310
+ D+WSLG + +++ + F +SE + I S+ DY
Sbjct: 182 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYK 241
Query: 311 -SFPPEQCGHIS--VP-----ARELIGQLLNTHADKRPTAGQLLQVAWFAEAS 355
SFP S VP R L+ Q+L+ +KR +A L +F + +
Sbjct: 242 PSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 104/236 (44%), Gaps = 23/236 (9%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQI---TRAEYNLLSTLMHAH 157
+YE+L ++G G F V KAR R TGQ VALK++ E + + E +L L H +
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 158 IPTALALFENAPVP-----GTDTIVMQLVHGE--SLIQHLCRQSTITESYICCIIRQLHS 210
+ + + P G+ +V + L+ ++ + T++E I +++ L +
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE--IKRVMQMLLN 136
Query: 211 ALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXX----------LPDLEFA 259
L+ +H +I H+D++ N+L+ VLKL D G + L +
Sbjct: 137 GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 196
Query: 260 SPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPE 315
PE+L GP D+W G ++ + + +E+ A IS S PE
Sbjct: 197 PPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 252
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 105/245 (42%), Gaps = 12/245 (4%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRAEYNLLSTLMHAHI 158
++E ++ LG G F V + TG A+K + +++ + +QI N L +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 101
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + L + +VM+ V G + HL R +E + Q+ LHS
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLP---DLEFASPEMLTSPATAGPST 274
+ ++D++PEN+L++ +++ D G E+ +PE++ S +
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGY-NKAV 220
Query: 275 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 334
D W+LGVL+Y + +G PF + + I FP H S ++L+ LL
Sbjct: 221 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQV 276
Query: 335 HADKR 339
KR
Sbjct: 277 DLTKR 281
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 104/236 (44%), Gaps = 23/236 (9%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQI---TRAEYNLLSTLMHAH 157
+YE+L ++G G F V KAR R TGQ VALK++ E + + E +L L H +
Sbjct: 18 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 77
Query: 158 IPTALALFENAPVP-----GTDTIVMQLVHGE--SLIQHLCRQSTITESYICCIIRQLHS 210
+ + + P G+ +V + L+ ++ + T++E I +++ L +
Sbjct: 78 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE--IKRVMQMLLN 135
Query: 211 ALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXX----------LPDLEFA 259
L+ +H +I H+D++ N+L+ VLKL D G + L +
Sbjct: 136 GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 195
Query: 260 SPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPE 315
PE+L GP D+W G ++ + + +E+ A IS S PE
Sbjct: 196 PPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 251
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTA 161
++++E++G G + V KAR++ TG++VALK+I + + + + +S L + P
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 162 LALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITE---SYICCIIRQLHSALHCLHSQ 218
+ L + +V + + + ++ S +T I + QL L HS
Sbjct: 66 VKLLDVIHTENKLYLVFEFLSMD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 219 QIAHKDIRPENILMN--GAVLKLIDLGXXXX------XXXXXLPDLEFASPEMLTSPATA 270
++ H+D++PEN+L+N GA+ KL D G + L + +PE+L
Sbjct: 124 RVLHRDLKPENLLINTEGAI-KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 182
Query: 271 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI----------------SVADY--SF 312
+ D+WSLG + +++ + F +SE + I S+ DY SF
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 242
Query: 313 PPEQCGHIS--VP-----ARELIGQLLNTHADKRPTAGQLLQVAWFAEAS 355
P S VP R L+ Q+L+ +KR +A L +F + +
Sbjct: 243 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 292
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 105/245 (42%), Gaps = 12/245 (4%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRAEYNLLSTLMHAHI 158
++E ++ LG G F V + TG A+K + +++ + +QI N L +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 100
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + L + +VM+ V G + HL R +E + Q+ LHS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLP---DLEFASPEMLTSPATAGPST 274
+ ++D++PEN+L++ +++ D G E+ +PE++ S +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY-NKAV 219
Query: 275 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 334
D W+LGVL+Y + +G PF + + I FP H S ++L+ LL
Sbjct: 220 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQV 275
Query: 335 HADKR 339
KR
Sbjct: 276 DLTKR 280
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 129/290 (44%), Gaps = 39/290 (13%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTA 161
++++E++G G + V KAR++ TG++VAL +I + + + + +S L + P
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 162 LALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITE---SYICCIIRQLHSALHCLHSQ 218
+ L + +V + +H + ++ S +T I + QL L HS
Sbjct: 65 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 219 QIAHKDIRPENILMN--GAVLKLIDLGXXXX------XXXXXLPDLEFASPEMLTSPATA 270
++ H+D++P+N+L+N GA+ KL D G + L + +PE+L
Sbjct: 123 RVLHRDLKPQNLLINTEGAI-KLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 181
Query: 271 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI----------------SVADY--SF 312
+ D+WSLG + +++ + F +SE + I S+ DY SF
Sbjct: 182 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 241
Query: 313 PPEQCGHIS--VP-----ARELIGQLLNTHADKRPTAGQLLQVAWFAEAS 355
P S VP R L+ Q+L+ +KR +A L +F + +
Sbjct: 242 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 129/290 (44%), Gaps = 39/290 (13%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTA 161
++++E++G G + V KAR++ TG++VAL +I + + + + +S L + P
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 162 LALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITE---SYICCIIRQLHSALHCLHSQ 218
+ L + +V + +H + ++ S +T I + QL L HS
Sbjct: 64 VKLLDVIHTENKLYLVFEFLHQD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 219 QIAHKDIRPENILMN--GAVLKLIDLGXXXX------XXXXXLPDLEFASPEMLTSPATA 270
++ H+D++P+N+L+N GA+ KL D G + L + +PE+L
Sbjct: 122 RVLHRDLKPQNLLINTEGAI-KLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 271 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI----------------SVADY--SF 312
+ D+WSLG + +++ + F +SE + I S+ DY SF
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 240
Query: 313 PPEQCGHIS--VP-----ARELIGQLLNTHADKRPTAGQLLQVAWFAEAS 355
P S VP R L+ Q+L+ +KR +A L +F + +
Sbjct: 241 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 290
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 105/245 (42%), Gaps = 12/245 (4%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRAEYNLLSTLMHAHI 158
++E ++ LG G F V + TG A+K + +++ + +QI N L +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 101
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + L + +VM+ V G + HL R +E + Q+ LHS
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLP---DLEFASPEMLTSPATAGPST 274
+ ++D++PEN+L++ +++ D G E+ +PE++ S +
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY-NKAV 220
Query: 275 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 334
D W+LGVL+Y + +G PF + + I FP H S ++L+ LL
Sbjct: 221 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQV 276
Query: 335 HADKR 339
KR
Sbjct: 277 DLTKR 281
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 105/245 (42%), Gaps = 12/245 (4%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRAEYNLLSTLMHAHI 158
++E ++ LG G F V + TG A+K + +++ + +QI N L +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 100
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + L + +VM+ V G + HL R +E + Q+ LHS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLP---DLEFASPEMLTSPATAGPST 274
+ ++D++PEN+L++ +++ D G E+ +PE++ S +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY-NKAV 219
Query: 275 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 334
D W+LGVL+Y + +G PF + + I FP H S ++L+ LL
Sbjct: 220 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQV 275
Query: 335 HADKR 339
KR
Sbjct: 276 DLTKR 280
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 105/245 (42%), Gaps = 12/245 (4%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRAEYNLLSTLMHAHI 158
++E ++ LG G F V + TG A+K + +++ + +QI N L +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 100
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + L + +VM+ V G + HL R +E + Q+ LHS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLP---DLEFASPEMLTSPATAGPST 274
+ ++D++PEN+L++ +++ D G E+ +PE++ S +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY-NKAV 219
Query: 275 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 334
D W+LGVL+Y + +G PF + + I FP H S ++L+ LL
Sbjct: 220 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQV 275
Query: 335 HADKR 339
KR
Sbjct: 276 DLTKR 280
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 129/290 (44%), Gaps = 39/290 (13%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXXX---XXXXXXLPDLEFASPEMLTSPATAG 271
HS I H+D++P N+ +N LK++D + + +PE++ +
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHISV 307
+ D+WS+G ++ LL+G + F +D+ S E R +I
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 308 ADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 262 LT-QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTA 161
++++E++G G + V KAR++ TG++VALK+I + + + + +S L + P
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 162 LALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITE---SYICCIIRQLHSALHCLHSQ 218
+ L + +V + + + ++ S +T I + QL L HS
Sbjct: 68 VKLLDVIHTENKLYLVFEFLSMD--LKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 219 QIAHKDIRPENILMN--GAVLKLIDLGXXXX------XXXXXLPDLEFASPEMLTSPATA 270
++ H+D++PEN+L+N GA+ KL D G + L + +PE+L
Sbjct: 126 RVLHRDLKPENLLINTEGAI-KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 271 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI----------------SVADY--SF 312
+ D+WSLG + +++ + F +SE + I S+ DY SF
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 244
Query: 313 PPEQCGHIS--VP-----ARELIGQLLNTHADKRPTAGQLLQVAWFAEAS 355
P S VP R L+ Q+L+ +KR +A L +F + +
Sbjct: 245 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 106/245 (43%), Gaps = 12/245 (4%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRAEYNLLSTLMHAHI 158
+++ ++ LG G F V + + +G A+K + +++ + +QI N L +
Sbjct: 29 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 87
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + L + +VM+ V G + HL R +E + Q+ LHS
Sbjct: 88 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 147
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLP---DLEFASPEMLTSPATAGPST 274
+ ++D++PEN+L++ +++ D G E+ +PE++ S +
Sbjct: 148 DLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY-NKAV 206
Query: 275 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 334
D W+LGVL+Y + +G PF + + I FP H S ++L+ LL
Sbjct: 207 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQV 262
Query: 335 HADKR 339
KR
Sbjct: 263 DLTKR 267
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 106/245 (43%), Gaps = 12/245 (4%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRAEYNLLSTLMHAHI 158
+++ ++ LG G F V + + +G A+K + +++ + +QI N L +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 100
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + L + +VM+ V G + HL R +E + Q+ LHS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLP---DLEFASPEMLTSPATAGPST 274
+ ++D++PEN+L++ +++ D G E+ +PE++ S +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY-NKAV 219
Query: 275 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 334
D W+LGVL+Y + +G PF + + I FP H S ++L+ LL
Sbjct: 220 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQV 275
Query: 335 HADKR 339
KR
Sbjct: 276 DLTKR 280
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 106/245 (43%), Gaps = 12/245 (4%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRAEYNLLSTLMHAHI 158
+++ ++ LG G F V + + +G A+K + +++ + +QI N L +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 100
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + L + +VM+ V G + HL R +E + Q+ LHS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLP---DLEFASPEMLTSPATAGPST 274
+ ++D++PEN+L++ +++ D G E+ +PE++ S +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY-NKAV 219
Query: 275 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 334
D W+LGVL+Y + +G PF + + I FP H S ++L+ LL
Sbjct: 220 DWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQV 275
Query: 335 HADKR 339
KR
Sbjct: 276 DLTKR 280
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 106/245 (43%), Gaps = 12/245 (4%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRAEYNLLSTLMHAHI 158
+++ ++ LG G F V + + +G A+K + +++ + +QI N L +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 100
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + L + +VM+ V G + HL R +E + Q+ LHS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLP---DLEFASPEMLTSPATAGPST 274
+ ++D++PEN+L++ +++ D G E+ +PE++ S +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY-NKAV 219
Query: 275 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 334
D W+LGVL+Y + +G PF + + I FP H S ++L+ LL
Sbjct: 220 DWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQV 275
Query: 335 HADKR 339
KR
Sbjct: 276 DLTKR 280
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 106/245 (43%), Gaps = 12/245 (4%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRAEYNLLSTLMHAHI 158
+++ ++ LG G F V + + +G A+K + +++ + +QI N L +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 100
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + L + +VM+ V G + HL R +E + Q+ LHS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLP---DLEFASPEMLTSPATAGPST 274
+ ++D++PEN+L++ +++ D G E+ +PE++ S +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY-NKAV 219
Query: 275 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 334
D W+LGVL+Y + +G PF + + I FP H S ++L+ LL
Sbjct: 220 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQV 275
Query: 335 HADKR 339
KR
Sbjct: 276 DLTKR 280
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 106/245 (43%), Gaps = 12/245 (4%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRAEYNLLSTLMHAHI 158
+++ ++ LG G F V + + +G A+K + +++ + +QI N L +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 100
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + L + +VM+ V G + HL R +E + Q+ LHS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLPDL---EFASPEMLTSPATAGPST 274
+ ++D++PEN+L++ +++ D G E+ +PE++ S +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLXGTPEYLAPEIILSKGY-NKAV 219
Query: 275 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 334
D W+LGVL+Y + +G PF + + I FP H S ++L+ LL
Sbjct: 220 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQV 275
Query: 335 HADKR 339
KR
Sbjct: 276 DLTKR 280
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 106/245 (43%), Gaps = 12/245 (4%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRAEYNLLSTLMHAHI 158
+++ ++ LG G F V + + +G A+K + +++ + +QI N L +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 100
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + L + +VM+ V G + HL R +E + Q+ LHS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLP---DLEFASPEMLTSPATAGPST 274
+ ++D++PEN+L++ +++ D G E+ +PE++ S +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY-NKAV 219
Query: 275 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 334
D W+LGVL+Y + +G PF + + I FP H S ++L+ LL
Sbjct: 220 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQV 275
Query: 335 HADKR 339
KR
Sbjct: 276 DLTKR 280
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 106/245 (43%), Gaps = 12/245 (4%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRAEYNLLSTLMHAHI 158
+++ ++ LG G F V + + +G A+K + +++ + +QI N L +
Sbjct: 63 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 121
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + L + +VM+ V G + HL R +E + Q+ LHS
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 181
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLP---DLEFASPEMLTSPATAGPST 274
+ ++D++PEN+L++ +++ D G E+ +PE++ S +
Sbjct: 182 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLCGTPEYLAPEIILSKGY-NKAV 240
Query: 275 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 334
D W+LGVL+Y + +G PF + + I FP H S ++L+ LL
Sbjct: 241 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQV 296
Query: 335 HADKR 339
KR
Sbjct: 297 DLTKR 301
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 106/245 (43%), Gaps = 12/245 (4%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRAEYNLLSTLMHAHI 158
+++ ++ LG G F V + + +G A+K + +++ + +QI N L +
Sbjct: 43 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 101
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + L + +VM+ V G + HL R +E + Q+ LHS
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLP---DLEFASPEMLTSPATAGPST 274
+ ++D++PEN+L++ +++ D G E+ +PE++ S +
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY-NKAV 220
Query: 275 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 334
D W+LGVL+Y + +G PF + + I FP H S ++L+ LL
Sbjct: 221 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQV 276
Query: 335 HADKR 339
KR
Sbjct: 277 DLTKR 281
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 105/245 (42%), Gaps = 12/245 (4%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRAEYNLLSTLMHAHI 158
++E ++ +G G F V + TG A+K + +++ + +QI N L +
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 100
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + L + +VM+ + G + HL R +E + Q+ LHS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLP---DLEFASPEMLTSPATAGPST 274
+ ++D++PEN+L++ +K+ D G E+ +PE++ S +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY-NKAV 219
Query: 275 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 334
D W+LGVL+Y + +G PF + + I FP H S ++L+ LL
Sbjct: 220 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQV 275
Query: 335 HADKR 339
KR
Sbjct: 276 DLTKR 280
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 101/225 (44%), Gaps = 15/225 (6%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRA--EYNLLSTLMHAHIP 159
Y +L++LG G + TV K + + T LVALK+I E + A E +LL L HA+I
Sbjct: 4 YIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIV 63
Query: 160 TALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESY-ICCIIRQLHSALHCLHSQ 218
T L + + T+V + + + L Q+L I + + + QL L H Q
Sbjct: 64 T---LHDIIHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ 119
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXX------XXXXXXXLPDLEFASPEMLTSPATAG 271
++ H+D++P+N+L+N LKL D G + L + P++L
Sbjct: 120 KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYS 179
Query: 272 PSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQ 316
DMW +G + Y + +G P S E + H P E+
Sbjct: 180 TQIDMWGVGCIFYEMATG-RPLFPGSTVEEQLHFIFRILGTPTEE 223
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 106/245 (43%), Gaps = 12/245 (4%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRAEYNLLSTLMHAHI 158
+++ ++ LG G F V + + +G A+K + +++ + +QI N L +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 100
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + L + +VM+ V G + HL R +E + Q+ LHS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXL---PDLEFASPEMLTSPATAGPST 274
+ ++D++PEN+L++ +++ D G E+ +PE++ S +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLAGTPEYLAPEIILSKGY-NKAV 219
Query: 275 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 334
D W+LGVL+Y + +G PF + + I FP H S ++L+ LL
Sbjct: 220 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQV 275
Query: 335 HADKR 339
KR
Sbjct: 276 DLTKR 280
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 105/245 (42%), Gaps = 12/245 (4%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRAEYNLLSTLMHAHI 158
++E ++ +G G F V + TG A+K + +++ + +QI N L +
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 100
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + L + +VM+ + G + HL R +E + Q+ LHS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLP---DLEFASPEMLTSPATAGPST 274
+ ++D++PEN+L++ +K+ D G E+ +PE++ S +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY-NKAV 219
Query: 275 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 334
D W+LGVL+Y + +G PF + + I FP H S ++L+ LL
Sbjct: 220 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQV 275
Query: 335 HADKR 339
KR
Sbjct: 276 DLTKR 280
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 20/214 (9%)
Query: 99 EHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHI 158
E Y + + +GNG F V +A+ +G+LVA+K++ Q ++ E ++ L H +I
Sbjct: 19 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---LQDKRFKNRELQIMRKLDHCNI 75
Query: 159 PTALALFENAPVPGTDTIVMQLVHGE------SLIQHLCR-QSTITESYICCIIRQLHSA 211
L F + D + + LV + +H R + T+ Y+ + QL +
Sbjct: 76 -VRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 212 LHCLHSQQIAHKDIRPENILM--NGAVLKLIDLGXXXXXXXXXLPDLE------FASPEM 263
L +HS I H+DI+P+N+L+ + AVLKL D G P++ + +PE+
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PNVSXICSRYYRAPEL 193
Query: 264 LTSPATAGPSTDMWSLGVLLYILLSGVSPFLDES 297
+ S D+WS G +L LL G F +S
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 129/290 (44%), Gaps = 39/290 (13%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V A D TG VA+K++ R Q + T E LL + H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXXX---XXXXXXLPDLEFASPEMLTSPATAG 271
HS I H+D++P N+ +N LK++ G + + +PE++ +
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 272 PSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETRAHISV 307
+ D+WS+G ++ LL+G + F +D+ S E R +I
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQS 261
Query: 308 ADYSFPPEQCGHISVPAR----ELIGQLLNTHADKRPTAGQLLQVAWFAE 353
P ++ + A +L+ ++L +DKR TA Q L A+FA+
Sbjct: 262 LT-QMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 104/245 (42%), Gaps = 12/245 (4%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRAEYNLLSTLMHAHI 158
++E ++ LG G F V + TG A+K + +++ + +QI N L +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 100
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + L + +VM+ V G + HL R E + Q+ LHS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 160
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLP---DLEFASPEMLTSPATAGPST 274
+ ++D++PEN+L++ +++ D G E+ +PE++ S +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY-NKAV 219
Query: 275 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 334
D W+LGVL+Y + +G PF + + I FP H S ++L+ LL
Sbjct: 220 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQV 275
Query: 335 HADKR 339
KR
Sbjct: 276 DLTKR 280
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 104/245 (42%), Gaps = 12/245 (4%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRAEYNLLSTLMHAHI 158
++E ++ LG G F V + TG A+K + +++ + +QI N L +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 101
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + L + +VM+ V G + HL R E + Q+ LHS
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 161
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLP---DLEFASPEMLTSPATAGPST 274
+ ++D++PEN+L++ +++ D G E+ +PE++ S +
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY-NKAV 220
Query: 275 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 334
D W+LGVL+Y + +G PF + + I FP H S ++L+ LL
Sbjct: 221 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQV 276
Query: 335 HADKR 339
KR
Sbjct: 277 DLTKR 281
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 104/245 (42%), Gaps = 12/245 (4%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRAEYNLLSTLMHAHI 158
++E ++ LG G F V + TG A+K + +++ + +QI N L +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 100
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + L + +VM+ V G + HL R E + Q+ LHS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 160
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLP---DLEFASPEMLTSPATAGPST 274
+ ++D++PEN+L++ +++ D G E+ +PE++ S +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY-NKAV 219
Query: 275 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 334
D W+LGVL+Y + +G PF + + I FP H S ++L+ LL
Sbjct: 220 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQV 275
Query: 335 HADKR 339
KR
Sbjct: 276 DLTKR 280
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 117/267 (43%), Gaps = 28/267 (10%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQI---PRERQPQQITRAEYNLLSTLMHAHI 158
YE L +G G + +K R + G+++ K++ +Q+ +E NLL L H +I
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNI 67
Query: 159 PTALALFENAPVPGTDT---IVMQLVHGESLIQHLCRQST----ITESYICCIIRQLHSA 211
+ + + T+T IVM+ G L + + + + E ++ ++ QL A
Sbjct: 68 ----VRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 212 LHCLHSQQ-----IAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDLEFASPEMLT 265
L H + + H+D++P N+ ++G +KL D G EF
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYM 183
Query: 266 SP-----ATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHI 320
SP + +D+WSLG LLY L + + PF S++E I + P +
Sbjct: 184 SPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYR---Y 240
Query: 321 SVPARELIGQLLNTHADKRPTAGQLLQ 347
S E+I ++LN RP+ ++L+
Sbjct: 241 SDELNEIITRMLNLKDYHRPSVEEILE 267
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 20/214 (9%)
Query: 99 EHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHI 158
E Y + + +GNG F V +A+ +G+LVA+K++ Q ++ E ++ L H +I
Sbjct: 32 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---LQDKRFKNRELQIMRKLDHCNI 88
Query: 159 PTALALFENAPVPGTDTIVMQLVHGE------SLIQHLCR-QSTITESYICCIIRQLHSA 211
L F + D + + LV + +H R + T+ Y+ + QL +
Sbjct: 89 -VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 147
Query: 212 LHCLHSQQIAHKDIRPENILM--NGAVLKLIDLGXXXXXXXXXLPDLEFA------SPEM 263
L +HS I H+DI+P+N+L+ + AVLKL D G P++ + +PE+
Sbjct: 148 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PNVSYICSRYYRAPEL 206
Query: 264 LTSPATAGPSTDMWSLGVLLYILLSGVSPFLDES 297
+ S D+WS G +L LL G F +S
Sbjct: 207 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 240
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 110/254 (43%), Gaps = 32/254 (12%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALKQIPRERQPQ----QITRAEYNLLS--------TLMH 155
LG G F V + +GT +L A+K + ++ Q + T E +L+ T +H
Sbjct: 28 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH 87
Query: 156 AHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ T L+ VM+ V+G L+ H+ + E + ++ L L
Sbjct: 88 SCFQTMDRLY----------FVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFL 137
Query: 216 HSQQIAHKDIRPENILMNG-AVLKLIDLGXXXXXXXXXLPDLEF-ASPEMLTSPATA--- 270
S+ I ++D++ +N++++ +K+ D G + F +P+ + A
Sbjct: 138 QSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQP 197
Query: 271 -GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIG 329
G S D W+ GVLLY +L+G +PF E E+E I + ++P +S A +
Sbjct: 198 YGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKS----MSKEAVAICK 253
Query: 330 QLLNTHADKRPTAG 343
L+ H KR G
Sbjct: 254 GLMTKHPGKRLGCG 267
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 105/245 (42%), Gaps = 12/245 (4%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRAEYNLLSTLMHAHI 158
+++ ++ LG G F V + + +G A+K + +++ + +QI N L +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 100
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + L + +VM+ V G + HL R E + Q+ LHS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSL 160
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLP---DLEFASPEMLTSPATAGPST 274
+ ++D++PEN+L++ +++ D G E+ +PE++ S +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY-NKAV 219
Query: 275 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 334
D W+LGVL+Y + +G PF + + I FP H S ++L+ LL
Sbjct: 220 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQV 275
Query: 335 HADKR 339
KR
Sbjct: 276 DLTKR 280
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 104/245 (42%), Gaps = 12/245 (4%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRAEYNLLSTLMHAHI 158
++E ++ LG G F V + TG A+K + +++ + +QI N L +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 100
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + L + +VM+ G + HL R +E + Q+ LHS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLP---DLEFASPEMLTSPATAGPST 274
+ ++D++PEN++++ +K+ D G E+ +PE++ S +
Sbjct: 161 DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY-NKAV 219
Query: 275 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 334
D W+LGVL+Y + +G PF + + I FP H S ++L+ LL
Sbjct: 220 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQV 275
Query: 335 HADKR 339
KR
Sbjct: 276 DLTKR 280
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 110/254 (43%), Gaps = 32/254 (12%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALKQIPRERQPQ----QITRAEYNLLS--------TLMH 155
LG G F V + +GT +L A+K + ++ Q + T E +L+ T +H
Sbjct: 349 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH 408
Query: 156 AHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ T L+ VM+ V+G L+ H+ + E + ++ L L
Sbjct: 409 SCFQTMDRLY----------FVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFL 458
Query: 216 HSQQIAHKDIRPENILMNG-AVLKLIDLGXXXXXXXXXLPDLEF-ASPEMLTSPATA--- 270
S+ I ++D++ +N++++ +K+ D G + F +P+ + A
Sbjct: 459 QSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQP 518
Query: 271 -GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIG 329
G S D W+ GVLLY +L+G +PF E E+E I + ++P +S A +
Sbjct: 519 YGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKS----MSKEAVAICK 574
Query: 330 QLLNTHADKRPTAG 343
L+ H KR G
Sbjct: 575 GLMTKHPGKRLGCG 588
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 20/214 (9%)
Query: 99 EHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHI 158
E Y + + +GNG F V +A+ +G+LVA+K++ Q ++ E ++ L H +I
Sbjct: 31 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---LQDKRFKNRELQIMRKLDHCNI 87
Query: 159 PTALALFENAPVPGTDTIVMQLVHGE------SLIQHLCR-QSTITESYICCIIRQLHSA 211
L F + D + + LV + +H R + T+ Y+ + QL +
Sbjct: 88 -VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 146
Query: 212 LHCLHSQQIAHKDIRPENILM--NGAVLKLIDLGXXXXXXXXXLPDLE------FASPEM 263
L +HS I H+DI+P+N+L+ + AVLKL D G P++ + +PE+
Sbjct: 147 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PNVSXICSRYYRAPEL 205
Query: 264 LTSPATAGPSTDMWSLGVLLYILLSGVSPFLDES 297
+ S D+WS G +L LL G F +S
Sbjct: 206 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 239
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 105/245 (42%), Gaps = 12/245 (4%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRAEYNLLSTLMHAHI 158
+++ ++ LG G F V + + +G A+K + +++ + +QI N L +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 100
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + L + +VM+ V G + HL R E + Q+ LHS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 160
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLP---DLEFASPEMLTSPATAGPST 274
+ ++D++PEN+L++ +++ D G E+ +PE++ S +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY-NKAV 219
Query: 275 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 334
D W+LGVL+Y + +G PF + + I FP H S ++L+ LL
Sbjct: 220 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQV 275
Query: 335 HADKR 339
KR
Sbjct: 276 DLTKR 280
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 20/214 (9%)
Query: 99 EHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHI 158
E Y + + +GNG F V +A+ +G+LVA+K++ Q ++ E ++ L H +I
Sbjct: 27 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---LQDKRFKNRELQIMRKLDHCNI 83
Query: 159 PTALALFENAPVPGTDTIVMQLVHGE------SLIQHLCR-QSTITESYICCIIRQLHSA 211
L F + D + + LV + +H R + T+ Y+ + QL +
Sbjct: 84 -VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 142
Query: 212 LHCLHSQQIAHKDIRPENILM--NGAVLKLIDLGXXXXXXXXXLPDLE------FASPEM 263
L +HS I H+DI+P+N+L+ + AVLKL D G P++ + +PE+
Sbjct: 143 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PNVSXICSRYYRAPEL 201
Query: 264 LTSPATAGPSTDMWSLGVLLYILLSGVSPFLDES 297
+ S D+WS G +L LL G F +S
Sbjct: 202 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 235
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 20/214 (9%)
Query: 99 EHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHI 158
E Y + + +GNG F V +A+ +G+LVA+K++ Q ++ E ++ L H +I
Sbjct: 38 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---LQDKRFKNRELQIMRKLDHCNI 94
Query: 159 PTALALFENAPVPGTDTIVMQLVHGE------SLIQHLCR-QSTITESYICCIIRQLHSA 211
L F + D + + LV + +H R + T+ Y+ + QL +
Sbjct: 95 -VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 153
Query: 212 LHCLHSQQIAHKDIRPENILM--NGAVLKLIDLGXXXXXXXXXLPDLE------FASPEM 263
L +HS I H+DI+P+N+L+ + AVLKL D G P++ + +PE+
Sbjct: 154 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PNVSXICSRYYRAPEL 212
Query: 264 LTSPATAGPSTDMWSLGVLLYILLSGVSPFLDES 297
+ S D+WS G +L LL G F +S
Sbjct: 213 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 246
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 20/214 (9%)
Query: 99 EHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHI 158
E Y + + +GNG F V +A+ +G+LVA+K++ Q ++ E ++ L H +I
Sbjct: 19 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---LQDKRFKNRELQIMRKLDHCNI 75
Query: 159 PTALALFENAPVPGTDTIVMQLVHGE------SLIQHLCR-QSTITESYICCIIRQLHSA 211
L F + D + + LV + +H R + T+ Y+ + QL +
Sbjct: 76 -VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 212 LHCLHSQQIAHKDIRPENILM--NGAVLKLIDLGXXXXXXXXXLPDLEFA------SPEM 263
L +HS I H+DI+P+N+L+ + AVLKL D G P++ + +PE+
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PNVSYICSRYYRAPEL 193
Query: 264 LTSPATAGPSTDMWSLGVLLYILLSGVSPFLDES 297
+ S D+WS G +L LL G F +S
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 20/214 (9%)
Query: 99 EHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHI 158
E Y + + +GNG F V +A+ +G+LVA+K++ Q ++ E ++ L H +I
Sbjct: 20 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---LQDKRFKNRELQIMRKLDHCNI 76
Query: 159 PTALALFENAPVPGTDTIVMQLVHGE------SLIQHLCR-QSTITESYICCIIRQLHSA 211
L F + D + + LV + +H R + T+ Y+ + QL +
Sbjct: 77 -VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 135
Query: 212 LHCLHSQQIAHKDIRPENILM--NGAVLKLIDLGXXXXXXXXXLPDLE------FASPEM 263
L +HS I H+DI+P+N+L+ + AVLKL D G P++ + +PE+
Sbjct: 136 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PNVSXICSRYYRAPEL 194
Query: 264 LTSPATAGPSTDMWSLGVLLYILLSGVSPFLDES 297
+ S D+WS G +L LL G F +S
Sbjct: 195 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 228
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 20/214 (9%)
Query: 99 EHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHI 158
E Y + + +GNG F V +A+ +G+LVA+K++ Q ++ E ++ L H +I
Sbjct: 19 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---LQDKRFKNRELQIMRKLDHCNI 75
Query: 159 PTALALFENAPVPGTDTIVMQLVHGE------SLIQHLCR-QSTITESYICCIIRQLHSA 211
L F + D + + LV + +H R + T+ Y+ + QL +
Sbjct: 76 -VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 212 LHCLHSQQIAHKDIRPENILM--NGAVLKLIDLGXXXXXXXXXLPDLE------FASPEM 263
L +HS I H+DI+P+N+L+ + AVLKL D G P++ + +PE+
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PNVSXICSRYYRAPEL 193
Query: 264 LTSPATAGPSTDMWSLGVLLYILLSGVSPFLDES 297
+ S D+WS G +L LL G F +S
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 98/221 (44%), Gaps = 18/221 (8%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALK--QIPRERQPQQI-TRAEYNLLSTLMHAH 157
RYE + +G G + TV KARD +G VALK ++P + I T E LL L
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE 64
Query: 158 IPTALALFENAPVPGTD-----TIVMQLVHGESLIQHLCRQ--STITESYICCIIRQLHS 210
P + L + TD T+V + V + L +L + + I ++RQ
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 211 ALHCLHSQQIAHKDIRPENILM-NGAVLKLIDLGXXXXXXXXXLPD-----LEFASPEML 264
L LH+ I H+D++PENIL+ +G +KL D G D L + +PE+L
Sbjct: 124 GLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTLWYRAPEVL 183
Query: 265 TSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI 305
A P DMWS+G + + F SE + I
Sbjct: 184 LQSTYATP-VDMWSVGCIFAEMFRRKPLFCGNSEADQLGKI 223
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 105/245 (42%), Gaps = 12/245 (4%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRAEYNLLSTLMHAHI 158
+++ ++ LG G F V + + +G A+K + +++ + +QI N L +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 100
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + L + +VM+ V G + HL R E + Q+ LHS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 160
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLP---DLEFASPEMLTSPATAGPST 274
+ ++D++PEN+L++ +++ D G E+ +PE++ S +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY-NKAV 219
Query: 275 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 334
D W+LGVL+Y + +G PF + + I FP H S ++L+ LL
Sbjct: 220 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQV 275
Query: 335 HADKR 339
KR
Sbjct: 276 DLTKR 280
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 106/245 (43%), Gaps = 12/245 (4%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRAEYNLLSTLMHAHI 158
+++ ++ LG G F V + + +G A+K + +++ + +QI N L +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 100
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + L + +VM+ V G + HL R +E + Q+ LHS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLP---DLEFASPEMLTSPATAGPST 274
+ ++D++PEN++++ +++ D G E+ +PE++ S +
Sbjct: 161 DLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIISKGY-NKAV 219
Query: 275 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 334
D W+LGVL+Y + +G PF + + I FP H S ++L+ LL
Sbjct: 220 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQV 275
Query: 335 HADKR 339
KR
Sbjct: 276 DLTKR 280
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 20/214 (9%)
Query: 99 EHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHI 158
E Y + + +GNG F V +A+ +G+LVA+K++ Q ++ E ++ L H +I
Sbjct: 23 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---LQDKRFKNRELQIMRKLDHCNI 79
Query: 159 PTALALFENAPVPGTDTIVMQLVHGE------SLIQHLCR-QSTITESYICCIIRQLHSA 211
L F + D + + LV + +H R + T+ Y+ + QL +
Sbjct: 80 -VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 138
Query: 212 LHCLHSQQIAHKDIRPENILM--NGAVLKLIDLGXXXXXXXXXLPDLE------FASPEM 263
L +HS I H+DI+P+N+L+ + AVLKL D G P++ + +PE+
Sbjct: 139 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PNVSXICSRYYRAPEL 197
Query: 264 LTSPATAGPSTDMWSLGVLLYILLSGVSPFLDES 297
+ S D+WS G +L LL G F +S
Sbjct: 198 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 231
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 20/214 (9%)
Query: 99 EHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHI 158
E Y + + +GNG F V +A+ +G+LVA+K++ Q ++ E ++ L H +I
Sbjct: 31 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---LQDKRFKNRELQIMRKLDHCNI 87
Query: 159 PTALALFENAPVPGTDTIVMQLVHGE------SLIQHLCR-QSTITESYICCIIRQLHSA 211
L F + D + + LV + +H R + T+ Y+ + QL +
Sbjct: 88 -VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 146
Query: 212 LHCLHSQQIAHKDIRPENILM--NGAVLKLIDLGXXXXXXXXXLPDLE------FASPEM 263
L +HS I H+DI+P+N+L+ + AVLKL D G P++ + +PE+
Sbjct: 147 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PNVSXICSRYYRAPEL 205
Query: 264 LTSPATAGPSTDMWSLGVLLYILLSGVSPFLDES 297
+ S D+WS G +L LL G F +S
Sbjct: 206 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 239
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 105/245 (42%), Gaps = 12/245 (4%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRAEYNLLSTLMHAHI 158
+++ ++ LG G F V + + +G A+K + +++ + +QI N L +
Sbjct: 37 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 95
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + L + +VM+ V G + HL R E + Q+ LHS
Sbjct: 96 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 155
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLP---DLEFASPEMLTSPATAGPST 274
+ ++D++PEN+L++ +++ D G E+ +PE++ S +
Sbjct: 156 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY-NKAV 214
Query: 275 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 334
D W+LGVL+Y + +G PF + + I FP H S ++L+ LL
Sbjct: 215 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQV 270
Query: 335 HADKR 339
KR
Sbjct: 271 DLTKR 275
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 20/214 (9%)
Query: 99 EHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHI 158
E Y + + +GNG F V +A+ +G+LVA+K++ Q ++ E ++ L H +I
Sbjct: 19 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---LQDKRFKNRELQIMRKLDHCNI 75
Query: 159 PTALALFENAPVPGTDTIVMQLVHGE------SLIQHLCR-QSTITESYICCIIRQLHSA 211
L F + D + + LV + +H R + T+ Y+ + QL +
Sbjct: 76 -VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 212 LHCLHSQQIAHKDIRPENILM--NGAVLKLIDLGXXXXXXXXXLPDLE------FASPEM 263
L +HS I H+DI+P+N+L+ + AVLKL D G P++ + +PE+
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PNVSXICSRYYRAPEL 193
Query: 264 LTSPATAGPSTDMWSLGVLLYILLSGVSPFLDES 297
+ S D+WS G +L LL G F +S
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 20/214 (9%)
Query: 99 EHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHI 158
E Y + + +GNG F V +A+ +G+LVA+K++ Q ++ E ++ L H +I
Sbjct: 24 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---LQDKRFKNRELQIMRKLDHCNI 80
Query: 159 PTALALFENAPVPGTDTIVMQLVHGE------SLIQHLCR-QSTITESYICCIIRQLHSA 211
L F + D + + LV + +H R + T+ Y+ + QL +
Sbjct: 81 -VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 139
Query: 212 LHCLHSQQIAHKDIRPENILM--NGAVLKLIDLGXXXXXXXXXLPDLEFA------SPEM 263
L +HS I H+DI+P+N+L+ + AVLKL D G P++ + +PE+
Sbjct: 140 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PNVSYICSRYYRAPEL 198
Query: 264 LTSPATAGPSTDMWSLGVLLYILLSGVSPFLDES 297
+ S D+WS G +L LL G F +S
Sbjct: 199 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 232
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 105/245 (42%), Gaps = 12/245 (4%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRAEYNLLSTLMHAHI 158
+++ ++ LG G F V + + +G A+K + +++ + +QI N L +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 100
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + L + +VM+ V G + HL R E + Q+ LHS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 160
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLP---DLEFASPEMLTSPATAGPST 274
+ ++D++PEN+L++ +++ D G E+ +PE++ S +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY-NKAV 219
Query: 275 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 334
D W+LGVL+Y + +G PF + + I FP H S ++L+ LL
Sbjct: 220 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQV 275
Query: 335 HADKR 339
KR
Sbjct: 276 DLTKR 280
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 20/214 (9%)
Query: 99 EHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHI 158
E Y + + +GNG F V +A+ +G+LVA+K++ Q ++ E ++ L H +I
Sbjct: 47 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---LQDKRFKNRELQIMRKLDHCNI 103
Query: 159 PTALALFENAPVPGTDTIVMQLVHGE------SLIQHLCR-QSTITESYICCIIRQLHSA 211
L F + D + + LV + +H R + T+ Y+ + QL +
Sbjct: 104 -VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 162
Query: 212 LHCLHSQQIAHKDIRPENILM--NGAVLKLIDLGXXXXXXXXXLPDLEFA------SPEM 263
L +HS I H+DI+P+N+L+ + AVLKL D G P++ + +PE+
Sbjct: 163 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PNVSYICSRYYRAPEL 221
Query: 264 LTSPATAGPSTDMWSLGVLLYILLSGVSPFLDES 297
+ S D+WS G +L LL G F +S
Sbjct: 222 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 255
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 20/214 (9%)
Query: 99 EHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHI 158
E Y + + +GNG F V +A+ +G+LVA+K++ Q ++ E ++ L H +I
Sbjct: 53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---LQDKRFKNRELQIMRKLDHCNI 109
Query: 159 PTALALFENAPVPGTDTIVMQLVHGE------SLIQHLCR-QSTITESYICCIIRQLHSA 211
L F + D + + LV + +H R + T+ Y+ + QL +
Sbjct: 110 -VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 168
Query: 212 LHCLHSQQIAHKDIRPENILM--NGAVLKLIDLGXXXXXXXXXLPDLEFA------SPEM 263
L +HS I H+DI+P+N+L+ + AVLKL D G P++ + +PE+
Sbjct: 169 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PNVSYICSRYYRAPEL 227
Query: 264 LTSPATAGPSTDMWSLGVLLYILLSGVSPFLDES 297
+ S D+WS G +L LL G F +S
Sbjct: 228 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 261
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 20/214 (9%)
Query: 99 EHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHI 158
E Y + + +GNG F V +A+ +G+LVA+K++ Q ++ E ++ L H +I
Sbjct: 55 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---LQDKRFKNRELQIMRKLDHCNI 111
Query: 159 PTALALFENAPVPGTDTIVMQLVHGE------SLIQHLCR-QSTITESYICCIIRQLHSA 211
L F + D + + LV + +H R + T+ Y+ + QL +
Sbjct: 112 -VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 170
Query: 212 LHCLHSQQIAHKDIRPENILM--NGAVLKLIDLGXXXXXXXXXLPDLEFA------SPEM 263
L +HS I H+DI+P+N+L+ + AVLKL D G P++ + +PE+
Sbjct: 171 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PNVSYICSRYYRAPEL 229
Query: 264 LTSPATAGPSTDMWSLGVLLYILLSGVSPFLDES 297
+ S D+WS G +L LL G F +S
Sbjct: 230 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 263
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 105/245 (42%), Gaps = 12/245 (4%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRAEYNLLSTLMHAHI 158
+++ ++ LG G F V + + +G A+K + +++ + +QI N L +
Sbjct: 63 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 121
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + L + +VM+ V G + HL R E + Q+ LHS
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 181
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXL---PDLEFASPEMLTSPATAGPST 274
+ ++D++PEN+L++ +++ D G E+ +PE++ S +
Sbjct: 182 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY-NKAV 240
Query: 275 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 334
D W+LGVL+Y + +G PF + + I FP H S ++L+ LL
Sbjct: 241 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQV 296
Query: 335 HADKR 339
KR
Sbjct: 297 DLTKR 301
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 20/214 (9%)
Query: 99 EHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHI 158
E Y + + +GNG F V +A+ +G+LVA+K++ Q ++ E ++ L H +I
Sbjct: 57 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---LQDKRFKNRELQIMRKLDHCNI 113
Query: 159 PTALALFENAPVPGTDTIVMQLVHGE------SLIQHLCR-QSTITESYICCIIRQLHSA 211
L F + D + + LV + +H R + T+ Y+ + QL +
Sbjct: 114 -VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 172
Query: 212 LHCLHSQQIAHKDIRPENILM--NGAVLKLIDLGXXXXXXXXXLPDLEFA------SPEM 263
L +HS I H+DI+P+N+L+ + AVLKL D G P++ + +PE+
Sbjct: 173 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PNVSYICSRYYRAPEL 231
Query: 264 LTSPATAGPSTDMWSLGVLLYILLSGVSPFLDES 297
+ S D+WS G +L LL G F +S
Sbjct: 232 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 265
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 20/214 (9%)
Query: 99 EHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHI 158
E Y + + +GNG F V +A+ +G+LVA+K++ Q ++ E ++ L H +I
Sbjct: 98 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---LQDKRFKNRELQIMRKLDHCNI 154
Query: 159 PTALALFENAPVPGTDTIVMQLVHGE------SLIQHLCR-QSTITESYICCIIRQLHSA 211
L F + D + + LV + +H R + T+ Y+ + QL +
Sbjct: 155 -VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 213
Query: 212 LHCLHSQQIAHKDIRPENILM--NGAVLKLIDLGXXXXXXXXXLPDLEFA------SPEM 263
L +HS I H+DI+P+N+L+ + AVLKL D G P++ + +PE+
Sbjct: 214 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PNVSYICSRYYRAPEL 272
Query: 264 LTSPATAGPSTDMWSLGVLLYILLSGVSPFLDES 297
+ S D+WS G +L LL G F +S
Sbjct: 273 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 306
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 20/214 (9%)
Query: 99 EHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHI 158
E Y + + +GNG F V +A+ +G+LVA+K++ Q ++ E ++ L H +I
Sbjct: 53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---LQDKRFKNRELQIMRKLDHCNI 109
Query: 159 PTALALFENAPVPGTDTIVMQLVHGE------SLIQHLCR-QSTITESYICCIIRQLHSA 211
L F + D + + LV + +H R + T+ Y+ + QL +
Sbjct: 110 -VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 168
Query: 212 LHCLHSQQIAHKDIRPENILM--NGAVLKLIDLGXXXXXXXXXLPDLE------FASPEM 263
L +HS I H+DI+P+N+L+ + AVLKL D G P++ + +PE+
Sbjct: 169 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PNVSXICSRYYRAPEL 227
Query: 264 LTSPATAGPSTDMWSLGVLLYILLSGVSPFLDES 297
+ S D+WS G +L LL G F +S
Sbjct: 228 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 261
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 103/245 (42%), Gaps = 12/245 (4%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRAEYNLLSTLMHAHI 158
++E ++ LG G F V + TG A+K + +++ + +QI N L +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 100
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + L + +VM+ G + HL R E + Q+ LHS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 160
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLP---DLEFASPEMLTSPATAGPST 274
+ ++D++PEN++++ +K+ D G E+ +PE++ S +
Sbjct: 161 DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY-NKAV 219
Query: 275 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 334
D W+LGVL+Y + +G PF + + I FP H S ++L+ LL
Sbjct: 220 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQV 275
Query: 335 HADKR 339
KR
Sbjct: 276 DLTKR 280
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTA 161
++++E++G G + V KAR++ TG++VALK+I + + + + +S L + P
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 162 LALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITE---SYICCIIRQLHSALHCLHSQ 218
+ L + +V + + + ++ S +T I + QL L HS
Sbjct: 67 VKLLDVIHTENKLYLVFEFLSMD--LKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 219 QIAHKDIRPENILMN--GAVLKLIDLGXXXX------XXXXXLPDLEFASPEMLTSPATA 270
++ H+D++P+N+L+N GA+ KL D G + L + +PE+L
Sbjct: 125 RVLHRDLKPQNLLINTEGAI-KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 183
Query: 271 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI----------------SVADY--SF 312
+ D+WSLG + +++ + F +SE + I S+ DY SF
Sbjct: 184 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 243
Query: 313 PPEQCGHIS--VP-----ARELIGQLLNTHADKRPTAGQLLQVAWFAEAS 355
P S VP R L+ Q+L+ +KR +A L +F + +
Sbjct: 244 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 293
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 117/276 (42%), Gaps = 17/276 (6%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRE----RQPQQITRAEYNLLSTLMHAH 157
+E + LG G F V A + T Q A+K + ++ + T E +LS L H
Sbjct: 20 FELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLS-LAWEH 78
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHS 217
P +F VM+ ++G L+ H+ S ++ L LHS
Sbjct: 79 -PFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHS 137
Query: 218 QQIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLPDLEF-ASPEMLTSPATAGP--- 272
+ I ++D++ +NIL++ +K+ D G EF +P+ + G
Sbjct: 138 KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQKYN 197
Query: 273 -STDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQL 331
S D WS GVLLY +L G SPF + EEE I + D F P + A++L+ +L
Sbjct: 198 HSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRM-DNPFYPRW---LEKEAKDLLVKL 253
Query: 332 LNTHADKR-PTAGQLLQVAWFAEASCSEFDTERLLP 366
+KR G + Q F E + E + + + P
Sbjct: 254 FVREPEKRLGVRGDIRQHPLFREINWEELERKEIDP 289
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 103/245 (42%), Gaps = 12/245 (4%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRAEYNLLSTLMHAHI 158
++E ++ LG G F V + TG A+K + +++ + +QI N L +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 101
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P L + +VM+ G + HL R +E + Q+ LHS
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLP---DLEFASPEMLTSPATAGPST 274
+ ++D++PEN++++ +K+ D G E+ +PE++ S +
Sbjct: 162 DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY-NKAV 220
Query: 275 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 334
D W+LGVL+Y + +G PF + + I FP H S ++L+ LL
Sbjct: 221 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQV 276
Query: 335 HADKR 339
KR
Sbjct: 277 DLTKR 281
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 39/290 (13%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTA 161
++++E++G G + V KAR++ TG++VALK+I + + + + +S L + P
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 162 LALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITE---SYICCIIRQLHSALHCLHSQ 218
+ L + +V + + + ++ S +T I + QL L HS
Sbjct: 68 VKLLDVIHTENKLYLVFEFLSMD--LKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 219 QIAHKDIRPENILMN--GAVLKLIDLGXXXX------XXXXXLPDLEFASPEMLTSPATA 270
++ H+D++P+N+L+N GA+ KL D G + L + +PE+L
Sbjct: 126 RVLHRDLKPQNLLINTEGAI-KLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 271 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI----------------SVADY--SF 312
+ D+WSLG + +++ + F +SE + I S+ DY SF
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 244
Query: 313 PPEQCGHIS--VP-----ARELIGQLLNTHADKRPTAGQLLQVAWFAEAS 355
P S VP R L+ Q+L+ +KR +A L +F + +
Sbjct: 245 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 294
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 100/214 (46%), Gaps = 20/214 (9%)
Query: 99 EHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHI 158
E Y + + +GNG F V +A+ +G+LVA+K++ Q + E ++ L H +I
Sbjct: 19 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---LQGKAFKNRELQIMRKLDHCNI 75
Query: 159 PTALALFENAPVPGTDTIVMQLVHGE------SLIQHLCR-QSTITESYICCIIRQLHSA 211
L F + D + + LV + +H R + T+ Y+ + QL +
Sbjct: 76 -VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 212 LHCLHSQQIAHKDIRPENILM--NGAVLKLIDLGXXXXXXXXXLPDLEFA------SPEM 263
L +HS I H+DI+P+N+L+ + AVLKL D G P++ + +PE+
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PNVSYICSRYYRAPEL 193
Query: 264 LTSPATAGPSTDMWSLGVLLYILLSGVSPFLDES 297
+ S D+WS G +L LL G F +S
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 124/300 (41%), Gaps = 53/300 (17%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIP---RERQPQQITRAEYNLLSTLMHAH 157
++++LE+LGNG + TV K ++ TG VALK++ E P R E +L+ L H +
Sbjct: 6 QFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIR-EISLMKELKHEN 64
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITES-------YICCIIRQLHS 210
I + L++ T+V + + + ++ T+ + + QL
Sbjct: 65 I---VRLYDVIHTENKLTLVFEFMDND--LKKYMDSRTVGNTPRGLELNLVKYFQWQLLQ 119
Query: 211 ALHCLHSQQIAHKDIRPENILMNG-AVLKLIDLGXXXX------XXXXXLPDLEFASPEM 263
L H +I H+D++P+N+L+N LKL D G + L + +P++
Sbjct: 120 GLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDV 179
Query: 264 LTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI----------------SV 307
L T S D+WS G +L +++G F ++EE I +
Sbjct: 180 LMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKL 239
Query: 308 ADYS-----FPPEQCGHISVP---------ARELIGQLLNTHADKRPTAGQLLQVAWFAE 353
Y+ PP + P + + LL + D R +A Q L WFAE
Sbjct: 240 PKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAE 299
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 100/214 (46%), Gaps = 20/214 (9%)
Query: 99 EHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHI 158
E Y + + +GNG F V +A+ +G+LVA+K++ Q + E ++ L H +I
Sbjct: 19 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---LQGKAFKNRELQIMRKLDHCNI 75
Query: 159 PTALALFENAPVPGTDTIVMQLVHGE------SLIQHLCR-QSTITESYICCIIRQLHSA 211
L F + D + + LV + +H R + T+ Y+ + QL +
Sbjct: 76 -VRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 212 LHCLHSQQIAHKDIRPENILM--NGAVLKLIDLGXXXXXXXXXLPDLEFA------SPEM 263
L +HS I H+DI+P+N+L+ + AVLKL D G P++ + +PE+
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PNVSYICSRYYRAPEL 193
Query: 264 LTSPATAGPSTDMWSLGVLLYILLSGVSPFLDES 297
+ S D+WS G +L LL G F +S
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 103/245 (42%), Gaps = 12/245 (4%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRAEYNLLSTLMHAHI 158
++E ++ LG G F V + TG A+K + +++ + +QI N L +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 101
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P L + +VM+ G + HL R +E + Q+ LHS
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLP---DLEFASPEMLTSPATAGPST 274
+ ++D++PEN++++ +K+ D G E+ +PE++ S +
Sbjct: 162 DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY-NKAV 220
Query: 275 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 334
D W+LGVL+Y + +G PF + + I FP H S ++L+ LL
Sbjct: 221 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQV 276
Query: 335 HADKR 339
KR
Sbjct: 277 DLTKR 281
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 103/236 (43%), Gaps = 23/236 (9%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQI---TRAEYNLLSTLMHAH 157
+YE+L ++G G F V KAR R TGQ VALK++ E + + E +L L H +
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 158 IPTALALFENAPVP-----GTDTIVMQLVHGE--SLIQHLCRQSTITESYICCIIRQLHS 210
+ + + P + +V + L+ ++ + T++E I +++ L +
Sbjct: 79 VVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSE--IKRVMQMLLN 136
Query: 211 ALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXX----------LPDLEFA 259
L+ +H +I H+D++ N+L+ VLKL D G + L +
Sbjct: 137 GLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYR 196
Query: 260 SPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPE 315
PE+L GP D+W G ++ + + +E+ A IS S PE
Sbjct: 197 PPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 252
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 101/214 (47%), Gaps = 20/214 (9%)
Query: 99 EHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHI 158
E Y + + +GNG F V +A+ +G+LVA+K++ Q + E ++ L H +I
Sbjct: 19 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV---LQGKAFKNRELQIMRKLDHCNI 75
Query: 159 PTALALFENAPVPGTDTIVMQLV--HGESLIQHLCR-----QSTITESYICCIIRQLHSA 211
L F + D + + LV + + + + R + T+ Y+ + QL +
Sbjct: 76 -VRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRS 134
Query: 212 LHCLHSQQIAHKDIRPENILM--NGAVLKLIDLGXXXXXXXXXLPDLE------FASPEM 263
L +HS I H+DI+P+N+L+ + AVLKL D G P++ + +PE+
Sbjct: 135 LAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE-PNVSXICSRYYRAPEL 193
Query: 264 LTSPATAGPSTDMWSLGVLLYILLSGVSPFLDES 297
+ S D+WS G +L LL G F +S
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 128/261 (49%), Gaps = 22/261 (8%)
Query: 107 RLGNGRFCTVRKARDRGTGQLVALKQIP-RERQPQQITRAEYNLLSTLMHAHIPTALALF 165
++G G V A R +G+LVA+K++ R++Q +++ E ++ H ++ + ++
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV---VEMY 87
Query: 166 ENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQIAHKDI 225
+ V +VM+ + G +L + + + E I + + AL LH+Q + H+DI
Sbjct: 88 NSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDI 146
Query: 226 RPENILM--NGAVLKLIDLGXXXXXXXXXLPDLE-------FASPEMLTSPATAGPSTDM 276
+ ++IL+ +G V KL D G +P + + +PE L S GP D+
Sbjct: 147 KSDSILLTHDGRV-KLSDFGFCAQVSKE-VPRRKXLVGTPYWMAPE-LISRLPYGPEVDI 203
Query: 277 WSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPP--EQCGHISVPARELIGQLLNT 334
WSLG+++ ++ G P+ +E +A + D + PP + +S + + +LL
Sbjct: 204 WSLGIMVIEMVDGEPPYFNEP--PLKAMKMIRD-NLPPRLKNLHKVSPSLKGFLDRLLVR 260
Query: 335 HADKRPTAGQLLQVAWFAEAS 355
+R TA +LL+ + A+A
Sbjct: 261 DPAQRATAAELLKHPFLAKAG 281
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 128/261 (49%), Gaps = 22/261 (8%)
Query: 107 RLGNGRFCTVRKARDRGTGQLVALKQIP-RERQPQQITRAEYNLLSTLMHAHIPTALALF 165
++G G V A R +G+LVA+K++ R++Q +++ E ++ H ++ + ++
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV---VEMY 83
Query: 166 ENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQIAHKDI 225
+ V +VM+ + G +L + + + E I + + AL LH+Q + H+DI
Sbjct: 84 NSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDI 142
Query: 226 RPENILM--NGAVLKLIDLGXXXXXXXXXLPDLE-------FASPEMLTSPATAGPSTDM 276
+ ++IL+ +G V KL D G +P + + +PE L S GP D+
Sbjct: 143 KSDSILLTHDGRV-KLSDFGFCAQVSKE-VPRRKXLVGTPYWMAPE-LISRLPYGPEVDI 199
Query: 277 WSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPP--EQCGHISVPARELIGQLLNT 334
WSLG+++ ++ G P+ +E +A + D + PP + +S + + +LL
Sbjct: 200 WSLGIMVIEMVDGEPPYFNEP--PLKAMKMIRD-NLPPRLKNLHKVSPSLKGFLDRLLVR 256
Query: 335 HADKRPTAGQLLQVAWFAEAS 355
+R TA +LL+ + A+A
Sbjct: 257 DPAQRATAAELLKHPFLAKAG 277
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 128/261 (49%), Gaps = 22/261 (8%)
Query: 107 RLGNGRFCTVRKARDRGTGQLVALKQIP-RERQPQQITRAEYNLLSTLMHAHIPTALALF 165
++G G V A R +G+LVA+K++ R++Q +++ E ++ H ++ + ++
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV---VEMY 92
Query: 166 ENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQIAHKDI 225
+ V +VM+ + G +L + + + E I + + AL LH+Q + H+DI
Sbjct: 93 NSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDI 151
Query: 226 RPENILM--NGAVLKLIDLGXXXXXXXXXLPDLE-------FASPEMLTSPATAGPSTDM 276
+ ++IL+ +G V KL D G +P + + +PE L S GP D+
Sbjct: 152 KSDSILLTHDGRV-KLSDFGFCAQVSKE-VPRRKXLVGTPYWMAPE-LISRLPYGPEVDI 208
Query: 277 WSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPP--EQCGHISVPARELIGQLLNT 334
WSLG+++ ++ G P+ +E +A + D + PP + +S + + +LL
Sbjct: 209 WSLGIMVIEMVDGEPPYFNEP--PLKAMKMIRD-NLPPRLKNLHKVSPSLKGFLDRLLVR 265
Query: 335 HADKRPTAGQLLQVAWFAEAS 355
+R TA +LL+ + A+A
Sbjct: 266 DPAQRATAAELLKHPFLAKAG 286
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 104/245 (42%), Gaps = 12/245 (4%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNL--LSTLMHAHI 158
++E ++ LG G F V + TG A+K + +++ + + E+ L L +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK-LKEIEHTLNEKRILQAVNF 100
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + L + +VM+ G + HL R +E + Q+ LHS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLP---DLEFASPEMLTSPATAGPST 274
+ ++D++PEN++++ +K+ D G E+ +PE++ S +
Sbjct: 161 DLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGY-NKAV 219
Query: 275 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 334
D W+LGVL+Y + +G PF + + I FP H S ++L+ LL
Sbjct: 220 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQV 275
Query: 335 HADKR 339
KR
Sbjct: 276 DLTKR 280
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 128/261 (49%), Gaps = 22/261 (8%)
Query: 107 RLGNGRFCTVRKARDRGTGQLVALKQIP-RERQPQQITRAEYNLLSTLMHAHIPTALALF 165
++G G V A R +G+LVA+K++ R++Q +++ E ++ H ++ + ++
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV---VEMY 94
Query: 166 ENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQIAHKDI 225
+ V +VM+ + G +L + + + E I + + AL LH+Q + H+DI
Sbjct: 95 NSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDI 153
Query: 226 RPENILM--NGAVLKLIDLGXXXXXXXXXLPDLE-------FASPEMLTSPATAGPSTDM 276
+ ++IL+ +G V KL D G +P + + +PE L S GP D+
Sbjct: 154 KSDSILLTHDGRV-KLSDFGFCAQVSKE-VPRRKXLVGTPYWMAPE-LISRLPYGPEVDI 210
Query: 277 WSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPP--EQCGHISVPARELIGQLLNT 334
WSLG+++ ++ G P+ +E +A + D + PP + +S + + +LL
Sbjct: 211 WSLGIMVIEMVDGEPPYFNEP--PLKAMKMIRD-NLPPRLKNLHKVSPSLKGFLDRLLVR 267
Query: 335 HADKRPTAGQLLQVAWFAEAS 355
+R TA +LL+ + A+A
Sbjct: 268 DPAQRATAAELLKHPFLAKAG 288
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 113/265 (42%), Gaps = 19/265 (7%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER---QPQQITRAEYNLLSTLMHAH 157
+Y L+++G G F + G+ +K+I R + ++ +R E +L+ + H +
Sbjct: 25 KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPN 84
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTI--TESYICCIIRQLHSALHCL 215
I FE G+ IVM G L + + Q + E I Q+ AL +
Sbjct: 85 IVQYRESFEEN---GSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHV 141
Query: 216 HSQQIAHKDIRPENI-LMNGAVLKLIDLGXXXXXXXXX------LPDLEFASPEMLTSPA 268
H ++I H+DI+ +NI L ++L D G + + SPE+ +
Sbjct: 142 HDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKP 201
Query: 269 TAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELI 328
S D+W+LG +LY L + F E+ + + SFPP H S R L+
Sbjct: 202 YNNKS-DIWALGCVLYELCTLKHAF--EAGSMKNLVLKIISGSFPPVSL-HYSYDLRSLV 257
Query: 329 GQLLNTHADKRPTAGQLLQVAWFAE 353
QL + RP+ +L+ + A+
Sbjct: 258 SQLFKRNPRDRPSVNSILEKGFIAK 282
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 116/270 (42%), Gaps = 39/270 (14%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQ-QITRAEYNLLSTLMHAHIPT 160
+E + LG+G F V KA+++ TG L A K I + + + + E +L+T H +I
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVK 80
Query: 161 ALA----------LFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHS 210
L + E P D I+++L G +TE I + RQ+
Sbjct: 81 LLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRG------------LTEPQIQVVCRQMLE 128
Query: 211 ALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLPDLEFASPEMLTSPAT 269
AL+ LHS++I H+D++ N+LM ++L D G F +P
Sbjct: 129 ALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEV 188
Query: 270 AGPST----------DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQC-- 317
T D+WSLG+ L I ++ + P E R + +A S PP
Sbjct: 189 VMCETMKDTPYDYKADIWSLGITL-IEMAQIEPPHHEL-NPMRVLLKIAK-SDPPTLLTP 245
Query: 318 GHISVPARELIGQLLNTHADKRPTAGQLLQ 347
SV R+ + L+ + + RP+A QLL+
Sbjct: 246 SKWSVEFRDFLKIALDKNPETRPSAAQLLE 275
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 110/263 (41%), Gaps = 17/263 (6%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRAEYNLLSTLMHAHI 158
+++ ++ LG G F V + + +G A+K + +++ + +QI N L +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 100
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + L + +VM+ V G + HL R +E + Q+ LHS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLP---DLEFASPEMLTSPATAGPST 274
+ ++D++PEN+L++ +++ D G E+ +PE++ S +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY-NKAV 219
Query: 275 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 334
D W+LGVL+Y + +G PF + + I FP H S ++L+ LL
Sbjct: 220 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQV 275
Query: 335 HADK-----RPTAGQLLQVAWFA 352
K + + WFA
Sbjct: 276 DLTKAFGNLKNGVNDIKNHKWFA 298
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 116/270 (42%), Gaps = 39/270 (14%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQ-QITRAEYNLLSTLMHAHIPT 160
+E + LG+G F V KA+++ TG L A K I + + + + E +L+T H +I
Sbjct: 13 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVK 72
Query: 161 ALA----------LFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHS 210
L + E P D I+++L G +TE I + RQ+
Sbjct: 73 LLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRG------------LTEPQIQVVCRQMLE 120
Query: 211 ALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLPDLEFASPEMLTSPAT 269
AL+ LHS++I H+D++ N+LM ++L D G F +P
Sbjct: 121 ALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEV 180
Query: 270 AGPST----------DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQC-- 317
T D+WSLG+ L I ++ + P E R + +A S PP
Sbjct: 181 VMCETMKDTPYDYKADIWSLGITL-IEMAQIEPPHHEL-NPMRVLLKIAK-SDPPTLLTP 237
Query: 318 GHISVPARELIGQLLNTHADKRPTAGQLLQ 347
SV R+ + L+ + + RP+A QLL+
Sbjct: 238 SKWSVEFRDFLKIALDKNPETRPSAAQLLE 267
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 104/245 (42%), Gaps = 12/245 (4%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRAEYNLLSTLMHAHI 158
++E ++ LG G F V + TG A+K + +++ + +QI N L +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 100
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + L + +VM+ G + HL R +E + Q+ LHS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLP---DLEFASPEMLTSPATAGPST 274
+ ++D++PEN++++ +++ D G E+ +PE++ S +
Sbjct: 161 DLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY-NKAV 219
Query: 275 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 334
D W+LGVL+Y + +G PF + + I FP H S ++L+ LL
Sbjct: 220 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQV 275
Query: 335 HADKR 339
KR
Sbjct: 276 DLTKR 280
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 105/245 (42%), Gaps = 12/245 (4%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMH--AHI 158
++E + LG G F V + + TG A+K + +++ + + + E+ L + +
Sbjct: 43 QFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVK-LKQIEHTLNEKRIQQAVNF 101
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + L + +V++ G + HL R +E + Q+ LHS
Sbjct: 102 PFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 161
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLP---DLEFASPEMLTSPATAGPST 274
+ ++D++PEN+L++ +K+ D G E+ +PE++ S +
Sbjct: 162 DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY-NKAV 220
Query: 275 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 334
D W+LGVL+Y + +G PF + + I FP H S ++L+ LL
Sbjct: 221 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQV 276
Query: 335 HADKR 339
KR
Sbjct: 277 DLTKR 281
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 120/272 (44%), Gaps = 38/272 (13%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQI---PRERQPQQITRAEYNLLSTLMHAHI 158
YE L +G G + +K R + G+++ K++ +Q+ +E NLL L H +I
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNI 67
Query: 159 PTALALFENAPVPGTDT---IVMQLVHGESLIQHLCRQST----ITESYICCIIRQLHSA 211
+ + + T+T IVM+ G L + + + + E ++ ++ QL A
Sbjct: 68 ----VRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 212 LHCLHSQQ-----IAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDLEFA------ 259
L H + + H+D++P N+ ++G +KL D G D FA
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH----DTSFAKTFVGT 179
Query: 260 ----SPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPE 315
SPE + + +D+WSLG LLY L + + PF S++E I + P
Sbjct: 180 PYYMSPEQMNR-MSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPY 238
Query: 316 QCGHISVPARELIGQLLNTHADKRPTAGQLLQ 347
+ S E+I ++LN RP+ ++L+
Sbjct: 239 R---YSDELNEIITRMLNLKDYHRPSVEEILE 267
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 102/245 (41%), Gaps = 12/245 (4%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRAEYNLLSTLMHAHI 158
++E ++ LG G F V + TG A+K + +++ + +QI N L +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 101
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P L + +VM+ G + HL R E + Q+ LHS
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL 161
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLP---DLEFASPEMLTSPATAGPST 274
+ ++D++PEN++++ +K+ D G E+ +PE++ S +
Sbjct: 162 DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGY-NKAV 220
Query: 275 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 334
D W+LGVL+Y + +G PF + + I FP H S ++L+ LL
Sbjct: 221 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQV 276
Query: 335 HADKR 339
KR
Sbjct: 277 DLTKR 281
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 120/272 (44%), Gaps = 38/272 (13%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQI---PRERQPQQITRAEYNLLSTLMHAHI 158
YE L +G G + +K R + G+++ K++ +Q+ +E NLL L H +I
Sbjct: 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNI 67
Query: 159 PTALALFENAPVPGTDT---IVMQLVHGESLIQHLCRQST----ITESYICCIIRQLHSA 211
+ + + T+T IVM+ G L + + + + E ++ ++ QL A
Sbjct: 68 ----VRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLA 123
Query: 212 LHCLHSQQ-----IAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDLEFA------ 259
L H + + H+D++P N+ ++G +KL D G D FA
Sbjct: 124 LKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNH----DTSFAKAFVGT 179
Query: 260 ----SPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPE 315
SPE + + +D+WSLG LLY L + + PF S++E I + P
Sbjct: 180 PYYMSPEQMNR-MSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPY 238
Query: 316 QCGHISVPARELIGQLLNTHADKRPTAGQLLQ 347
+ S E+I ++LN RP+ ++L+
Sbjct: 239 R---YSDELNEIITRMLNLKDYHRPSVEEILE 267
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 98/221 (44%), Gaps = 18/221 (8%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALK--QIPRERQPQQI-TRAEYNLLSTLMHAH 157
RYE + +G G + TV KARD +G VALK ++P + I T E LL L
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE 64
Query: 158 IPTALALFENAPVPGTD-----TIVMQLVHGESLIQHLCRQ--STITESYICCIIRQLHS 210
P + L + TD T+V + V + L +L + + I ++RQ
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 211 ALHCLHSQQIAHKDIRPENILM-NGAVLKLIDLG-----XXXXXXXXXLPDLEFASPEML 264
L LH+ I H+D++PENIL+ +G +KL D G + L + +PE+L
Sbjct: 124 GLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVTLWYRAPEVL 183
Query: 265 TSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI 305
A P DMWS+G + + F SE + I
Sbjct: 184 LQSTYATP-VDMWSVGCIFAEMFRRKPLFCGNSEADQLGKI 223
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 118/277 (42%), Gaps = 33/277 (11%)
Query: 94 QQEQFEHRYEELERLGNGRFCTVRKARDRGTGQL-VALKQIPRERQ------------PQ 140
+E FE Y LG G F TV A R T +L VA+K IPR R P
Sbjct: 25 DREAFEAEYRLGPLLGKGGFGTVF-AGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPL 83
Query: 141 QITRAEYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESY 200
++ + + + H + L FE G ++ + + + L ++ + + E
Sbjct: 84 EVALL-WKVGAGGGHPGVIRLLDWFETQE--GFMLVLERPLPAQDLFDYITEKGPLGEGP 140
Query: 201 ICCIIRQLHSALHCLHSQQIAHKDIRPENILMN--GAVLKLIDLGXXXXXXXXXLPDLE- 257
C Q+ +A+ HS+ + H+DI+ ENIL++ KLID G D +
Sbjct: 141 SRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDG 200
Query: 258 ---FASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPP 314
++ PE ++ +WSLG+LLY ++ G PF E ++E I A+ FP
Sbjct: 201 TRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPF--ERDQE----ILEAELHFP- 253
Query: 315 EQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF 351
H+S LI + L RP+ ++L W
Sbjct: 254 ---AHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWM 287
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 127/260 (48%), Gaps = 20/260 (7%)
Query: 107 RLGNGRFCTVRKARDRGTGQLVALKQIP-RERQPQQITRAEYNLLSTLMHAHIPTALALF 165
++G G V A R +G+LVA+K++ R++Q +++ E ++ H ++ + ++
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV---VEMY 137
Query: 166 ENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQIAHKDI 225
+ V +VM+ + G +L + + + E I + + AL LH+Q + H+DI
Sbjct: 138 NSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDI 196
Query: 226 RPENILM-NGAVLKLIDLGXXXXXXXXXLPDLE-------FASPEMLTSPATAGPSTDMW 277
+ ++IL+ + +KL D G +P + + +PE L S GP D+W
Sbjct: 197 KSDSILLTHDGRVKLSDFGFCAQVSKE-VPRRKXLVGTPYWMAPE-LISRLPYGPEVDIW 254
Query: 278 SLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPP--EQCGHISVPARELIGQLLNTH 335
SLG+++ ++ G P+ +E +A + D + PP + +S + + +LL
Sbjct: 255 SLGIMVIEMVDGEPPYFNEP--PLKAMKMIRD-NLPPRLKNLHKVSPSLKGFLDRLLVRD 311
Query: 336 ADKRPTAGQLLQVAWFAEAS 355
+R TA +LL+ + A+A
Sbjct: 312 PAQRATAAELLKHPFLAKAG 331
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 128/260 (49%), Gaps = 20/260 (7%)
Query: 107 RLGNGRFCTVRKARDRGTGQLVALKQIP-RERQPQQITRAEYNLLSTLMHAHIPTALALF 165
++G G V A R +G+LVA+K++ R++Q +++ E ++ H ++ + ++
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENV---VEMY 214
Query: 166 ENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQIAHKDI 225
+ V +VM+ + G +L + + + E I + + AL LH+Q + H+DI
Sbjct: 215 NSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDI 273
Query: 226 RPENILM-NGAVLKLIDLGXXXXXXXXXLPDLE-------FASPEMLTSPATAGPSTDMW 277
+ ++IL+ + +KL D G +P + + +PE+++ GP D+W
Sbjct: 274 KSDSILLTHDGRVKLSDFGFCAQVSKE-VPRRKXLVGTPYWMAPELISR-LPYGPEVDIW 331
Query: 278 SLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPP--EQCGHISVPARELIGQLLNTH 335
SLG+++ ++ G P+ +E +A + D + PP + +S + + +LL
Sbjct: 332 SLGIMVIEMVDGEPPYFNEP--PLKAMKMIRD-NLPPRLKNLHKVSPSLKGFLDRLLVRD 388
Query: 336 ADKRPTAGQLLQVAWFAEAS 355
+R TA +LL+ + A+A
Sbjct: 389 PAQRATAAELLKHPFLAKAG 408
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 98/221 (44%), Gaps = 18/221 (8%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALK--QIPRERQPQQI-TRAEYNLLSTLMHAH 157
RYE + +G G + TV KARD +G VALK ++P + I T E LL L
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE 64
Query: 158 IPTALALFENAPVPGTD-----TIVMQLVHGESLIQHLCRQ--STITESYICCIIRQLHS 210
P + L + TD T+V + V + L +L + + I ++RQ
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 211 ALHCLHSQQIAHKDIRPENILM-NGAVLKLIDLGXXXXXXXXX-----LPDLEFASPEML 264
L LH+ I H+D++PENIL+ +G +KL D G + L + +PE+L
Sbjct: 124 GLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTLWYRAPEVL 183
Query: 265 TSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI 305
A P DMWS+G + + F SE + I
Sbjct: 184 LQSTYATP-VDMWSVGCIFAEMFRRKPLFCGNSEADQLGKI 223
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 105/245 (42%), Gaps = 12/245 (4%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRAEYNLLSTLMHAHI 158
+++ ++ LG G F V + + +G A+K + +++ + +QI N L +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 100
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + L + +VM+ V G + HL R +E + Q+ LHS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLP---DLEFASPEMLTSPATAGPST 274
+ ++D++PEN+L++ +++ D G E +PE++ S +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEALAPEIILSKGY-NKAV 219
Query: 275 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 334
D W+LGVL+Y + +G PF + + I FP H S ++L+ LL
Sbjct: 220 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQV 275
Query: 335 HADKR 339
KR
Sbjct: 276 DLTKR 280
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 105/245 (42%), Gaps = 12/245 (4%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRAEYNLLSTLMHAHI 158
+++ ++ LG G F V + + +G A+K + +++ + +QI N L +
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHT-LNEKRILQAVNF 100
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + L + +VM+ V G + HL R +E + Q+ LHS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLP---DLEFASPEMLTSPATAGPST 274
+ ++D++PEN+L++ +++ D G E+ +P ++ S +
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPAIILSKGY-NKAV 219
Query: 275 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 334
D W+LGVL+Y + +G PF + + I FP H S ++L+ LL
Sbjct: 220 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQV 275
Query: 335 HADKR 339
KR
Sbjct: 276 DLTKR 280
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 122/277 (44%), Gaps = 31/277 (11%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALKQIPRE----RQPQQITRAEYNLLSTLMHAHIPTALA 163
LG G F V A + T Q A+K + ++ + T E +LS L H P
Sbjct: 25 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLS-LAWEH-PFLTH 82
Query: 164 LFENAPVPGTDTIVMQLVHGESLIQHL--CRQSTITES--YICCIIRQLHSALHCLHSQQ 219
+F VM+ ++G L+ H+ C + ++ + Y II L LHS+
Sbjct: 83 MFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEII----LGLQFLHSKG 138
Query: 220 IAHKDIRPENILMN-GAVLKLID--------LGXXXXXXXXXLPDLEFASPEMLTSPATA 270
I ++D++ +NIL++ +K+ D LG PD + +PE+L
Sbjct: 139 IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPD--YIAPEILLG-QKY 195
Query: 271 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 330
S D WS GVLLY +L G SPF + EEE I + D F P + A++L+ +
Sbjct: 196 NHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRM-DNPFYPRW---LEKEAKDLLVK 251
Query: 331 LLNTHADKR-PTAGQLLQVAWFAEASCSEFDTERLLP 366
L +KR G + Q F E + E + + + P
Sbjct: 252 LFVREPEKRLGVRGDIRQHPLFREINWEELERKEIDP 288
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 72/163 (44%), Gaps = 18/163 (11%)
Query: 199 SYICCIIRQLHSALHCLHSQQIAHKDIRPENILM-NGAVLKLIDLGXXXXXXXXXLPDL- 256
Y C QL L LHSQ I HKDI+P N+L+ G LK+ LG D
Sbjct: 113 GYFC----QLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTC 168
Query: 257 -------EFASPEMLTSPAT-AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA 308
F PE+ T +G D+WS GV LY + +G+ PF ++ + +I
Sbjct: 169 RTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKG 228
Query: 309 DYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF 351
Y+ P G P +L+ +L KR + Q+ Q +WF
Sbjct: 229 SYAIP----GDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWF 267
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 125/290 (43%), Gaps = 39/290 (13%)
Query: 100 HRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRA---EYNLLSTLMHA 156
+YE+LE++G G + TV KA++R T ++VALK++ + + + + E LL L H
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 157 HIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLH 216
+I + L + T+V + + + + + QL L H
Sbjct: 62 NI---VRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH 118
Query: 217 SQQIAHKDIRPENILMN-GAVLKLIDLGXXXXX------XXXXLPDLEFASPEMLTSPAT 269
S+ + H+D++P+N+L+N LKL D G + L + P++L
Sbjct: 119 SRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKL 178
Query: 270 AGPSTDMWSLGVLLYILLSGVSPF-----LDE------------SEEETRAHISVADYS- 311
S DMWS G + L + P +D+ +EE+ + + DY
Sbjct: 179 YSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKP 238
Query: 312 FP--PEQCGHISV------PARELIGQLLNTHADKRPTAGQLLQVAWFAE 353
+P P ++V R+L+ LL + +R +A + LQ +F++
Sbjct: 239 YPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 23/248 (9%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLL----STLMHAH 157
Y+ ++ +G G F V+ R + + ++ A+K + + + I R++ + A+
Sbjct: 77 YDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSK---FEMIKRSDSAFFWEERDIMAFAN 133
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHS 217
P + LF +VM+ + G L+ +L + E + ++ AL +HS
Sbjct: 134 SPWVVQLFCAFQDDKYLYMVMEYMPGGDLV-NLMSNYDVPEKWAKFYTAEVVLALDAIHS 192
Query: 218 QQIAHKDIRPENILMN----------GAVLKLIDLGXXXXXXXXXLPDLEFASPEMLTS- 266
+ H+D++P+N+L++ G +K+ + G PD + SPE+L S
Sbjct: 193 MGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPD--YISPEVLKSQ 250
Query: 267 --PATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPA 324
G D WS+GV L+ +L G +PF +S T + I S + IS A
Sbjct: 251 GGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPEDAEISKHA 310
Query: 325 RELIGQLL 332
+ LI L
Sbjct: 311 KNLICAFL 318
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 104/245 (42%), Gaps = 12/245 (4%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNL--LSTLMHAHI 158
++E ++ LG G F V + TG A+K + +++ + + E+ L L +
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVK-LKEIEHTLNEKRILQAVNF 100
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + L + +VM+ G + HL R +E + Q+ LHS
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL 160
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLP---DLEFASPEMLTSPATAGPST 274
+ ++D++PEN++++ +++ D G E+ +PE++ S +
Sbjct: 161 DLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGY-NKAV 219
Query: 275 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNT 334
D W+LGVL+Y + +G PF + + I FP H S ++L+ LL
Sbjct: 220 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQV 275
Query: 335 HADKR 339
KR
Sbjct: 276 DLTKR 280
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 105/241 (43%), Gaps = 16/241 (6%)
Query: 100 HRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHA--- 156
+RYE L+ +G G F V KA D Q VALK + E++ + E +L L
Sbjct: 97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKD 156
Query: 157 HIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHC-- 214
+ + + EN + +L+ + L +++ + + + HS L C
Sbjct: 157 NTMNVIHMLENFTFRNHICMTFELLSMN--LYELIKKNKFQGFSLPLVRKFAHSILQCLD 214
Query: 215 -LHSQQIAHKDIRPENILM---NGAVLKLIDLGXXXXXXXXXLPDLE---FASPEMLTSP 267
LH +I H D++PENIL+ + +K+ID G ++ + +PE++
Sbjct: 215 ALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILG- 273
Query: 268 ATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAREL 327
A G DMWSLG +L LL+G P L +E + + P ++ S A+
Sbjct: 274 ARYGMPIDMWSLGCILAELLTGY-PLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNF 332
Query: 328 I 328
+
Sbjct: 333 V 333
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 96/227 (42%), Gaps = 27/227 (11%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQI---------TRAEYNLLS 151
RYE + +G G + TV KARD +G VALK + R P T E LL
Sbjct: 10 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSV---RVPNGGGGGGGLPISTVREVALLR 66
Query: 152 TLMHAHIPTALALFENAPVPGTD-----TIVMQLVHGESLIQHLCRQ--STITESYICCI 204
L P + L + TD T+V + V + L +L + + I +
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDL 125
Query: 205 IRQLHSALHCLHSQQIAHKDIRPENILM-NGAVLKLIDLG-----XXXXXXXXXLPDLEF 258
+RQ L LH+ I H+D++PENIL+ +G +KL D G + L +
Sbjct: 126 MRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWY 185
Query: 259 ASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI 305
+PE+L A P DMWS+G + + F SE + I
Sbjct: 186 RAPEVLLQSTYATP-VDMWSVGCIFAEMFRRKPLFCGNSEADQLGKI 231
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 136/304 (44%), Gaps = 48/304 (15%)
Query: 90 ETRWQQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAE 146
+T W+ Q R + L +G+G + +V A D Q VA+K++ R Q + T E
Sbjct: 21 KTVWEVPQ---RLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRE 77
Query: 147 YNLLSTLMHAHIPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCI 204
LL L H ++ L +F A ++ ++ + G L ++ + +++ ++ +
Sbjct: 78 LRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADL-NNIVKSQALSDEHVQFL 136
Query: 205 IRQLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLPDLE---FAS 260
+ QL L +HS I H+D++P N+ +N + L+++D G + + +
Sbjct: 137 VYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRA 196
Query: 261 PEMLTSPATAGPSTDMWSLGVLLYILLSGV-----SPFLDE------------------- 296
PE++ + + D+WS+G ++ LL G S ++D+
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKI 256
Query: 297 SEEETRAHISVADYSFPPEQCGHISVPAR-------ELIGQLLNTHADKRPTAGQLLQVA 349
S E R +I S PP +S R +L+G++L +D+R +A + L A
Sbjct: 257 SSEHARTYIQ----SLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHA 312
Query: 350 WFAE 353
+F++
Sbjct: 313 YFSQ 316
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 105/241 (43%), Gaps = 16/241 (6%)
Query: 100 HRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHA--- 156
+RYE L+ +G G F V KA D Q VALK + E++ + E +L L
Sbjct: 97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKD 156
Query: 157 HIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHC-- 214
+ + + EN + +L+ + L +++ + + + HS L C
Sbjct: 157 NTMNVIHMLENFTFRNHICMTFELLSMN--LYELIKKNKFQGFSLPLVRKFAHSILQCLD 214
Query: 215 -LHSQQIAHKDIRPENILM---NGAVLKLIDLGXXXXXXXXXLPDLE---FASPEMLTSP 267
LH +I H D++PENIL+ + +K+ID G ++ + +PE++
Sbjct: 215 ALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILG- 273
Query: 268 ATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAREL 327
A G DMWSLG +L LL+G P L +E + + P ++ S A+
Sbjct: 274 ARYGMPIDMWSLGCILAELLTGY-PLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNF 332
Query: 328 I 328
+
Sbjct: 333 V 333
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 91/195 (46%), Gaps = 9/195 (4%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALKQIPRER----QPQQITRAEYNLLSTLMHAHIPTALA 163
+G G F V R TG++ A+K + ++R Q + + E +LS + P +
Sbjct: 196 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 255
Query: 164 LFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQIAHK 223
+ P + ++ L++G L HL + +E+ + ++ L +H++ + ++
Sbjct: 256 MSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYR 315
Query: 224 DIRPENILMNG-AVLKLIDLGXXXXXXXXX----LPDLEFASPEMLTSPATAGPSTDMWS 278
D++P NIL++ +++ DLG + + +PE+L S D +S
Sbjct: 316 DLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFS 375
Query: 279 LGVLLYILLSGVSPF 293
LG +L+ LL G SPF
Sbjct: 376 LGCMLFKLLRGHSPF 390
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 91/195 (46%), Gaps = 9/195 (4%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALKQIPRER----QPQQITRAEYNLLSTLMHAHIPTALA 163
+G G F V R TG++ A+K + ++R Q + + E +LS + P +
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 164 LFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQIAHK 223
+ P + ++ L++G L HL + +E+ + ++ L +H++ + ++
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYR 316
Query: 224 DIRPENILMNG-AVLKLIDLGXXXXXXXXX----LPDLEFASPEMLTSPATAGPSTDMWS 278
D++P NIL++ +++ DLG + + +PE+L S D +S
Sbjct: 317 DLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFS 376
Query: 279 LGVLLYILLSGVSPF 293
LG +L+ LL G SPF
Sbjct: 377 LGCMLFKLLRGHSPF 391
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 91/195 (46%), Gaps = 9/195 (4%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALKQIPRER----QPQQITRAEYNLLSTLMHAHIPTALA 163
+G G F V R TG++ A+K + ++R Q + + E +LS + P +
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 164 LFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQIAHK 223
+ P + ++ L++G L HL + +E+ + ++ L +H++ + ++
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYR 316
Query: 224 DIRPENILMNG-AVLKLIDLGXXXXXXXXX----LPDLEFASPEMLTSPATAGPSTDMWS 278
D++P NIL++ +++ DLG + + +PE+L S D +S
Sbjct: 317 DLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFS 376
Query: 279 LGVLLYILLSGVSPF 293
LG +L+ LL G SPF
Sbjct: 377 LGCMLFKLLRGHSPF 391
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 91/195 (46%), Gaps = 9/195 (4%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALKQIPRER----QPQQITRAEYNLLSTLMHAHIPTALA 163
+G G F V R TG++ A+K + ++R Q + + E +LS + P +
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 164 LFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQIAHK 223
+ P + ++ L++G L HL + +E+ + ++ L +H++ + ++
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYR 316
Query: 224 DIRPENILMNG-AVLKLIDLGXXXXXXXXX----LPDLEFASPEMLTSPATAGPSTDMWS 278
D++P NIL++ +++ DLG + + +PE+L S D +S
Sbjct: 317 DLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFS 376
Query: 279 LGVLLYILLSGVSPF 293
LG +L+ LL G SPF
Sbjct: 377 LGCMLFKLLRGHSPF 391
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 105/241 (43%), Gaps = 16/241 (6%)
Query: 100 HRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHA--- 156
+RYE L+ +G G F V KA D Q VALK + E++ + E +L L
Sbjct: 97 YRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKD 156
Query: 157 HIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHC-- 214
+ + + EN + +L+ + L +++ + + + HS L C
Sbjct: 157 NTMNVIHMLENFTFRNHICMTFELLSMN--LYELIKKNKFQGFSLPLVRKFAHSILQCLD 214
Query: 215 -LHSQQIAHKDIRPENILM---NGAVLKLIDLGXXXXXXXXXLPDLE---FASPEMLTSP 267
LH +I H D++PENIL+ + +K+ID G ++ + +PE++
Sbjct: 215 ALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYXXIQSRFYRAPEVILG- 273
Query: 268 ATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAREL 327
A G DMWSLG +L LL+G P L +E + + P ++ S A+
Sbjct: 274 ARYGMPIDMWSLGCILAELLTGY-PLLPGEDEGDQLACMIELLGMPXQKLLDASKRAKNF 332
Query: 328 I 328
+
Sbjct: 333 V 333
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 101/247 (40%), Gaps = 20/247 (8%)
Query: 105 LERLGNGRFCTVRKARDRGTGQLVALK-----QIPRERQPQQITRAEYNLLSTLMHAHIP 159
L+ +G G F V AR + A+K I ++++ + I LL + H P
Sbjct: 43 LKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKH---P 99
Query: 160 TALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQ 219
+ L + V+ ++G L HL R+ E ++ SAL LHS
Sbjct: 100 FLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLN 159
Query: 220 IAHKDIRPENILMNG-AVLKLIDLG------XXXXXXXXXLPDLEFASPEMLTSPATAGP 272
I ++D++PENIL++ + L D G E+ +PE+L
Sbjct: 160 IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHK-QPYDR 218
Query: 273 STDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLL 332
+ D W LG +LY +L G+ PF + E +I P +I+ AR L+ LL
Sbjct: 219 TVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKP----NITNSARHLLEGLL 274
Query: 333 NTHADKR 339
KR
Sbjct: 275 QKDRTKR 281
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 123/294 (41%), Gaps = 28/294 (9%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQI-PRERQPQ-QITRAEYNLLSTLMHAHI 158
RY +L+ +G G + V A D VA+K+I P E Q Q T E +L H ++
Sbjct: 44 RYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENV 103
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
+ + + + + E+ + L + ++ +IC + Q+ L +HS
Sbjct: 104 IGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRGLKYIHSA 163
Query: 219 QIAHKDIRPENILMNGAV-LKLIDLGXXXXX---------XXXXLPDLEFASPEMLTSPA 268
+ H+D++P N+L+N LK+ D G + + +PE++ +
Sbjct: 164 NVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSK 223
Query: 269 TAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELI 328
S D+WS+G +L +LS F + + HI G + P++E +
Sbjct: 224 GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI-----------LGILGSPSQEDL 272
Query: 329 GQLLNTHADKR----PTAGQLLQVAWFAEASCSEFD-TERLLPFSARRKQKFKE 377
++N A P+ ++ F ++ D +R+L F+ ++ +E
Sbjct: 273 NCIINMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEE 326
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 105/235 (44%), Gaps = 38/235 (16%)
Query: 176 IVMQLVHGESLIQHLCRQSTITESYIC--------CIIRQLHSALHCLHSQQ-IAHKDIR 226
I+ + + +S+++ + ++Y C CII+ + ++ +H+++ I H+D++
Sbjct: 120 IIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVK 179
Query: 227 PENILM--NGAVLKLIDLGXXXXXXXXXLPD----LEFASPEMLTSPAT-AGPSTDMWSL 279
P NILM NG V KL D G + EF PE ++ ++ G D+WSL
Sbjct: 180 PSNILMDKNGRV-KLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSL 238
Query: 280 GVLLYILLSGVSPF-LDESEEETRAHISVADYSFPPEQ-------------CGH--ISVP 323
G+ LY++ V PF L S E +I + +P ++ C + +S
Sbjct: 239 GICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNE 298
Query: 324 ARELIGQLLNTHADKRPTAGQLLQVAWFAEASCSEFDTERLLPFSARRKQKFKEI 378
+ + L + +R T+ L+ W A+ + E L FS +K K++
Sbjct: 299 DIDFLKLFLRKNPAERITSEDALKHEWLADT-----NIEDLREFSKELYKKRKKL 348
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 125/290 (43%), Gaps = 39/290 (13%)
Query: 100 HRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRA---EYNLLSTLMHA 156
+YE+LE++G G + TV KA++R T ++VALK++ + + + + E LL L H
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 157 HIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLH 216
+I + L + T+V + + + + + QL L H
Sbjct: 62 NI---VRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH 118
Query: 217 SQQIAHKDIRPENILMN-GAVLKLIDLGXXXXX------XXXXLPDLEFASPEMLTSPAT 269
S+ + H+D++P+N+L+N LKL + G + L + P++L
Sbjct: 119 SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKL 178
Query: 270 AGPSTDMWSLGVLLYILLSGVSPF-----LDE------------SEEETRAHISVADYS- 311
S DMWS G + L + P +D+ +EE+ + + DY
Sbjct: 179 YSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKP 238
Query: 312 FP--PEQCGHISV------PARELIGQLLNTHADKRPTAGQLLQVAWFAE 353
+P P ++V R+L+ LL + +R +A + LQ +F++
Sbjct: 239 YPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 136/304 (44%), Gaps = 48/304 (15%)
Query: 90 ETRWQQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAE 146
+T W+ Q R + L +G+G + +V A D Q VA+K++ R Q + T E
Sbjct: 21 KTVWEVPQ---RLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRE 77
Query: 147 YNLLSTLMHAHIPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCI 204
LL L H ++ L +F A ++ ++ + G L ++ + +++ ++ +
Sbjct: 78 LRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADL-NNIVKCQALSDEHVQFL 136
Query: 205 IRQLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXXXXX---XXXXLPDLEFAS 260
+ QL L +HS I H+D++P N+ +N + L+++D G + + +
Sbjct: 137 VYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRA 196
Query: 261 PEMLTSPATAGPSTDMWSLGVLLYILLSGV-----SPFLDE------------------- 296
PE++ + + D+WS+G ++ LL G S ++D+
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKI 256
Query: 297 SEEETRAHISVADYSFPPEQCGHISVPAR-------ELIGQLLNTHADKRPTAGQLLQVA 349
S E R +I S PP +S R +L+G++L +D+R +A + L A
Sbjct: 257 SSEHARTYIQ----SLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHA 312
Query: 350 WFAE 353
+F++
Sbjct: 313 YFSQ 316
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 135/304 (44%), Gaps = 48/304 (15%)
Query: 90 ETRWQQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAE 146
+T W+ Q R + L +G+G + +V A D Q VA+K++ R Q + T E
Sbjct: 13 KTVWEVPQ---RLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRE 69
Query: 147 YNLLSTLMHAHIPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCI 204
LL L H ++ L +F A ++ ++ + G L ++ + +++ ++ +
Sbjct: 70 LRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADL-NNIVKCQALSDEHVQFL 128
Query: 205 IRQLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXXXXX---XXXXLPDLEFAS 260
+ QL L +HS I H+D++P N+ +N L+++D G + + +
Sbjct: 129 VYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATRWYRA 188
Query: 261 PEMLTSPATAGPSTDMWSLGVLLYILLSGV-----SPFLDE------------------- 296
PE++ + + D+WS+G ++ LL G S ++D+
Sbjct: 189 PEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKI 248
Query: 297 SEEETRAHISVADYSFPPEQCGHISVPAR-------ELIGQLLNTHADKRPTAGQLLQVA 349
S E R +I S PP +S R +L+G++L +D+R +A + L A
Sbjct: 249 SSEHARTYIQ----SLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHA 304
Query: 350 WFAE 353
+F++
Sbjct: 305 YFSQ 308
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 98/202 (48%), Gaps = 10/202 (4%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAH 157
RY+ L +G+G + +V + D +G +A+K++ R Q + T E LL + H +
Sbjct: 52 RYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 111
Query: 158 IPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
+ L +F A D ++ + G L ++ + +T+ ++ +I Q+ L +
Sbjct: 112 VIGLLDVFTPATSLEEFNDVYLVTHLMGADL-NNIVKCQKLTDDHVQFLIYQILRGLKYI 170
Query: 216 HSQQIAHKDIRPENILMN-GAVLKLIDLGXXX---XXXXXXLPDLEFASPEMLTSPATAG 271
HS I H+D++P N+ +N LK++D G + + +PE++ +
Sbjct: 171 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 230
Query: 272 PSTDMWSLGVLLYILLSGVSPF 293
+ D+WS+G ++ LL+G + F
Sbjct: 231 MTVDIWSVGCIMAELLTGRTLF 252
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 126/287 (43%), Gaps = 28/287 (9%)
Query: 98 FEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPR----ERQPQQITRAEYNLLSTL 153
F+H +E L +G G F V + T ++ A+K + + ER + E ++ L
Sbjct: 14 FDH-FEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGL 72
Query: 154 MHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALH 213
H P + L+ + +V+ L+ G L HL + E + I +L AL
Sbjct: 73 EH---PFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALD 129
Query: 214 CLHSQQIAHKDIRPENILMN--GAV----LKLIDLGXXXXXXXXXLPDLEFASPEMLTSP 267
L +Q+I H+D++P+NIL++ G V + + + +PEM +S
Sbjct: 130 YLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSR 189
Query: 268 ATAGPS--TDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAR 325
AG S D WSLGV Y LL G P+ S ++ + ++F + S ++
Sbjct: 190 KGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIV----HTFETTVVTYPSAWSQ 245
Query: 326 ELIG---QLLNTHADKRPTAGQLLQVAWFAEASCSEFDT---ERLLP 366
E++ +LL + D+R QL V F + +D +RL+P
Sbjct: 246 EMVSLLKKLLEPNPDQR--FSQLSDVQNFPYMNDINWDAVFQKRLIP 290
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 101/238 (42%), Gaps = 23/238 (9%)
Query: 69 PGHTYTFCINNEYKVLYTVPFETRWQQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLV 128
P HT +L F+ + YE +E +GNG + V AR R TGQ V
Sbjct: 26 PAHTAASVAAKNLALLKARSFDVTFD---VGDEYEIIETIGNGAYGVVSSARRRLTGQQV 82
Query: 129 ALKQIPRERQPQQITRAEYNL--LSTLMHAHIPTALALFE----NAPVPGTDTIVMQLVH 182
A+K+IP +T A+ L L L H +A+ + P ++ + L
Sbjct: 83 AIKKIPNAF--DVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDL 140
Query: 183 GESLIQHLCRQST-ITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLI 240
ES + + S +T ++ + QL L +HS Q+ H+D++P N+L+N LK+
Sbjct: 141 MESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIG 200
Query: 241 DLGXX----------XXXXXXXLPDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLS 288
D G + + +PE++ S + D+WS+G + +L+
Sbjct: 201 DFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 258
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 119/296 (40%), Gaps = 52/296 (17%)
Query: 97 QFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHA 156
++ +EE+ LG G F V KAR+ + A+K+I + +E LL++L H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQ 62
Query: 157 HIPTALALF---ENAPVPGT-----DTIVMQ-----------LVHGESLIQHLCRQSTIT 197
++ A + N P T T+ +Q L+H E+L Q
Sbjct: 63 YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQ-------R 115
Query: 198 ESYICCIIRQLHSALHCLHSQQIAHKDIRPENILMNGAV-LKLIDLGXXX---------X 247
+ Y + RQ+ AL +HSQ I H+D++P NI ++ + +K+ D G
Sbjct: 116 DEY-WRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILK 174
Query: 248 XXXXXLPDLE-----------FASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDE 296
LP + + E+L DM+SLG++ + + + PF
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM---IYPFSTG 231
Query: 297 SEE-ETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF 351
E + FPP+ + +++I L++ +KRP A LL W
Sbjct: 232 MERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 119/296 (40%), Gaps = 52/296 (17%)
Query: 97 QFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHA 156
++ +EE+ LG G F V KAR+ + A+K+I + +E LL++L H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQ 62
Query: 157 HIPTALALF---ENAPVPGT-----DTIVMQ-----------LVHGESLIQHLCRQSTIT 197
++ A + N P T T+ +Q L+H E+L Q
Sbjct: 63 YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQ-------R 115
Query: 198 ESYICCIIRQLHSALHCLHSQQIAHKDIRPENILMNGAV-LKLIDLGXXX---------X 247
+ Y + RQ+ AL +HSQ I H+D++P NI ++ + +K+ D G
Sbjct: 116 DEY-WRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILK 174
Query: 248 XXXXXLPDLE-----------FASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDE 296
LP + + E+L DM+SLG++ + + + PF
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM---IYPFSTG 231
Query: 297 SEE-ETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF 351
E + FPP+ + +++I L++ +KRP A LL W
Sbjct: 232 MERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 116/276 (42%), Gaps = 23/276 (8%)
Query: 103 EELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTAL 162
E L +G+G V K R R TG ++A+KQ+ R ++ R +L L P +
Sbjct: 28 ENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIV 87
Query: 163 ALFENAPVPGTDT-IVMQLVH--GESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQ 219
F + TD I M+L+ E L + + Q I E + + + AL+ L +
Sbjct: 88 QCF-GTFITNTDVFIAMELMGTCAEKLKKRM--QGPIPERILGKMTVAIVKALYYLKEKH 144
Query: 220 -IAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLPD-----LEFASPEMLTSPATAGP 272
+ H+D++P NIL++ +KL D G D + +PE + P P
Sbjct: 145 GVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKP 204
Query: 273 S----TDMWSLGVLLYILLSGVSPFLD-ESEEETRAHISVADYSFPPEQCGHISVPA--R 325
D+WSLG+ L L +G P+ + +++ E + + PP GH+ +
Sbjct: 205 DYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEE---PPLLPGHMGFSGDFQ 261
Query: 326 ELIGQLLNTHADKRPTAGQLLQVAWFAEASCSEFDT 361
+ L KRP +LL+ ++ E D
Sbjct: 262 SFVKDCLTKDHRKRPKYNKLLEHSFIKRYETLEVDV 297
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 101/238 (42%), Gaps = 23/238 (9%)
Query: 69 PGHTYTFCINNEYKVLYTVPFETRWQQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLV 128
P HT +L F+ + YE +E +GNG + V AR R TGQ V
Sbjct: 27 PAHTAASVAAKNLALLKARSFDVTFD---VGDEYEIIETIGNGAYGVVSSARRRLTGQQV 83
Query: 129 ALKQIPRERQPQQITRAEYNL--LSTLMHAHIPTALALFE----NAPVPGTDTIVMQLVH 182
A+K+IP +T A+ L L L H +A+ + P ++ + L
Sbjct: 84 AIKKIPNAF--DVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDL 141
Query: 183 GESLIQHLCRQST-ITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLI 240
ES + + S +T ++ + QL L +HS Q+ H+D++P N+L+N LK+
Sbjct: 142 MESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIG 201
Query: 241 DLGXX----------XXXXXXXLPDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLS 288
D G + + +PE++ S + D+WS+G + +L+
Sbjct: 202 DFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 259
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 97/202 (48%), Gaps = 19/202 (9%)
Query: 99 EHRYEELERLGNGRFCTVRKARD-RGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAH 157
+ +YE + +G G + V KARD + G+ VALK++ + + + + ++ L H
Sbjct: 10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLE 69
Query: 158 I---PTALALFENAPVPGTD-----TIVMQLVHGESLIQHLCR--QSTITESYICCIIRQ 207
P + LF+ V TD T+V + V + L +L + + + I ++ Q
Sbjct: 70 TFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQ 128
Query: 208 LHSALHCLHSQQIAHKDIRPENILM-NGAVLKLIDLGXX-----XXXXXXXLPDLEFASP 261
L L LHS ++ H+D++P+NIL+ + +KL D G + L + +P
Sbjct: 129 LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAP 188
Query: 262 EMLTSPATAGPSTDMWSLGVLL 283
E+L + A P D+WS+G +
Sbjct: 189 EVLLQSSYATP-VDLWSVGCIF 209
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 97/202 (48%), Gaps = 19/202 (9%)
Query: 99 EHRYEELERLGNGRFCTVRKARD-RGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAH 157
+ +YE + +G G + V KARD + G+ VALK++ + + + + ++ L H
Sbjct: 10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLE 69
Query: 158 I---PTALALFENAPVPGTD-----TIVMQLVHGESLIQHLCR--QSTITESYICCIIRQ 207
P + LF+ V TD T+V + V + L +L + + + I ++ Q
Sbjct: 70 TFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQ 128
Query: 208 LHSALHCLHSQQIAHKDIRPENILM-NGAVLKLIDLGXX-----XXXXXXXLPDLEFASP 261
L L LHS ++ H+D++P+NIL+ + +KL D G + L + +P
Sbjct: 129 LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAP 188
Query: 262 EMLTSPATAGPSTDMWSLGVLL 283
E+L + A P D+WS+G +
Sbjct: 189 EVLLQSSYATP-VDLWSVGCIF 209
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 97/202 (48%), Gaps = 19/202 (9%)
Query: 99 EHRYEELERLGNGRFCTVRKARD-RGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAH 157
+ +YE + +G G + V KARD + G+ VALK++ + + + + ++ L H
Sbjct: 10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLE 69
Query: 158 I---PTALALFENAPVPGTD-----TIVMQLVHGESLIQHLCR--QSTITESYICCIIRQ 207
P + LF+ V TD T+V + V + L +L + + + I ++ Q
Sbjct: 70 TFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQ 128
Query: 208 LHSALHCLHSQQIAHKDIRPENILM-NGAVLKLIDLGXX-----XXXXXXXLPDLEFASP 261
L L LHS ++ H+D++P+NIL+ + +KL D G + L + +P
Sbjct: 129 LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAP 188
Query: 262 EMLTSPATAGPSTDMWSLGVLL 283
E+L + A P D+WS+G +
Sbjct: 189 EVLLQSSYATP-VDLWSVGCIF 209
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 103/252 (40%), Gaps = 31/252 (12%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQI-PRERQPQ-QITRAEYNLLSTLMHAHI 158
RY L +G G + V A D VA+K+I P E Q Q T E +L H +I
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
+ + + + E+ + L + ++ +IC + Q+ L +HS
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 143
Query: 219 QIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDLE-------------FASPEML 264
+ H+D++P N+L+N LK+ D G PD + + +PE++
Sbjct: 144 NVLHRDLKPSNLLLNTTXDLKIXDFGLARVAD----PDHDHTGFLTEYVATRWYRAPEIM 199
Query: 265 TSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPA 324
+ S D+WS+G +L +LS F + + HI G + P+
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI-----------LGILGSPS 248
Query: 325 RELIGQLLNTHA 336
+E + ++N A
Sbjct: 249 QEDLNXIINLKA 260
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 95/201 (47%), Gaps = 10/201 (4%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEY---NLLSTLMHAHI 158
Y +L+ +G+G + V A D TG VA+K++ R Q + + Y LL + H ++
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86
Query: 159 PTALALF--ENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLH 216
L +F + TD ++ G L + L + + E I ++ Q+ L +H
Sbjct: 87 IGLLDVFTPDETLDDFTDFYLVMPFMGTDLGK-LMKHEKLGEDRIQFLVYQMLKGLRYIH 145
Query: 217 SQQIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLPDLE---FASPEMLTSPATAGP 272
+ I H+D++P N+ +N LK++D G + + +PE++ +
Sbjct: 146 AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTRWYRAPEVILNWMRYTQ 205
Query: 273 STDMWSLGVLLYILLSGVSPF 293
+ D+WS+G ++ +++G + F
Sbjct: 206 TVDIWSVGCIMAEMITGKTLF 226
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 103/252 (40%), Gaps = 31/252 (12%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQI-PRERQPQ-QITRAEYNLLSTLMHAHI 158
RY L +G G + V A D VA+K+I P E Q Q T E +L H +I
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
+ + + + E+ + L + ++ +IC + Q+ L +HS
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 143
Query: 219 QIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDLE-------------FASPEML 264
+ H+D++P N+L+N LK+ D G PD + + +PE++
Sbjct: 144 NVLHRDLKPSNLLLNTTXDLKICDFGLARVAD----PDHDHTGFLTEYVATRWYRAPEIM 199
Query: 265 TSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPA 324
+ S D+WS+G +L +LS F + + HI G + P+
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI-----------LGILGSPS 248
Query: 325 RELIGQLLNTHA 336
+E + ++N A
Sbjct: 249 QEDLNXIINLKA 260
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 113/291 (38%), Gaps = 52/291 (17%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTA 161
+EE+ LG G F V KAR+ + A+K+I + +E LL++L H ++
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVRY 67
Query: 162 LALF---ENAPVPGT-----DTIVMQ-----------LVHGESLIQHLCRQSTITESYIC 202
A + N P T T+ +Q L+H E+L Q + Y
Sbjct: 68 YAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQ-------RDEY-W 119
Query: 203 CIIRQLHSALHCLHSQQIAHKDIRPENILMNGAV-LKLIDLGXXXX-------------- 247
+ RQ+ AL +HSQ I H++++P NI ++ + +K+ D G
Sbjct: 120 RLFRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 248 ------XXXXXLPDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEE-E 300
+ + + E+L D +SLG+ I + PF E
Sbjct: 180 LPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGI---IFFEXIYPFSTGXERVN 236
Query: 301 TRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF 351
+ FPP+ + +++I L++ +KRP A LL W
Sbjct: 237 ILKKLRSVSIEFPPDFDDNKXKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 87/200 (43%), Gaps = 12/200 (6%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTA 161
Y+ + +LG G++ V +A + + V +K I + + +I R E +L L
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVK-ILKPVKKNKIKR-EIKILENLRGGPNIIT 96
Query: 162 LALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQIA 221
LA PV T +V + V+ Q T+T+ I + ++ AL HS I
Sbjct: 97 LADIVKDPVSRTPALVFEHVNNTDFKQ---LYQTLTDYDIRFYMYEILKALDYCHSMGIM 153
Query: 222 HKDIRPENILMNGA--VLKLIDLGXXXXX-----XXXXLPDLEFASPEMLTSPATAGPST 274
H+D++P N++++ L+LID G + F PE+L S
Sbjct: 154 HRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSL 213
Query: 275 DMWSLGVLLYILLSGVSPFL 294
DMWSLG +L ++ PF
Sbjct: 214 DMWSLGCMLASMIFRKEPFF 233
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 108/254 (42%), Gaps = 18/254 (7%)
Query: 107 RLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTALALFE 166
R+G+G F TV K + G + LK + + Q R E +L H +I LF
Sbjct: 43 RIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNI----LLFM 98
Query: 167 NAPVPGTDTIVMQLVHGESLIQHLCRQSTITESY-ICCIIRQLHSALHCLHSQQIAHKDI 225
IV Q G SL +HL Q T + + + I RQ + LH++ I H+D+
Sbjct: 99 GYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDM 158
Query: 226 RPENILMN-GAVLKLIDLGXXXXXXXXX--------LPDLEFASPEMLTSPATAGPS--T 274
+ NI ++ G +K+ D G + + +PE++ S +
Sbjct: 159 KSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQS 218
Query: 275 DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPA--RELIGQLL 332
D++S G++LY L++G P+ + + + Y+ P + + P + L+ +
Sbjct: 219 DVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCV 278
Query: 333 NTHADKRPTAGQLL 346
++RP Q+L
Sbjct: 279 KKVKEERPLFPQIL 292
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 98/223 (43%), Gaps = 27/223 (12%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHA---- 156
RY + +LG G F TV A+D VA+K + ++ + E LL + A
Sbjct: 20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTK 79
Query: 157 -------HIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR--QSTITESYICCIIRQ 207
HI L F + G +++ V GE+L+ + + I Y+ I +Q
Sbjct: 80 EDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQ 139
Query: 208 LHSALHCLHSQ-QIAHKDIRPENILM-------NGAVLKLIDLGXX---XXXXXXXLPDL 256
L L +H + I H DI+PEN+LM N +K+ DLG +
Sbjct: 140 LLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTR 199
Query: 257 EFASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEE 299
E+ SPE+L A G D+WS L++ L++G FL E +E
Sbjct: 200 EYRSPEVLLG-APWGCGADIWSTACLIFELITG--DFLFEPDE 239
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 98/223 (43%), Gaps = 27/223 (12%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHA---- 156
RY + +LG G F TV A+D VA+K + ++ + E LL + A
Sbjct: 20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTK 79
Query: 157 -------HIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR--QSTITESYICCIIRQ 207
HI L F + G +++ V GE+L+ + + I Y+ I +Q
Sbjct: 80 EDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQ 139
Query: 208 LHSALHCLHSQ-QIAHKDIRPENILM-------NGAVLKLIDLGXX---XXXXXXXLPDL 256
L L +H + I H DI+PEN+LM N +K+ DLG +
Sbjct: 140 LLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTR 199
Query: 257 EFASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEE 299
E+ SPE+L A G D+WS L++ L++G FL E +E
Sbjct: 200 EYRSPEVLLG-APWGCGADIWSTACLIFELITG--DFLFEPDE 239
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 103/252 (40%), Gaps = 31/252 (12%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQI-PRERQPQ-QITRAEYNLLSTLMHAHI 158
RY L +G G + V A D VA+K+I P E Q Q T E +L H +I
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENI 85
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
+ + + + E+ + L + ++ +IC + Q+ L +HS
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 145
Query: 219 QIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDLE-------------FASPEML 264
+ H+D++P N+L+N LK+ D G PD + + +PE++
Sbjct: 146 NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD----PDHDHTGFLTEYVATRWYRAPEIM 201
Query: 265 TSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPA 324
+ S D+WS+G +L +LS F + + HI G + P+
Sbjct: 202 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI-----------LGILGSPS 250
Query: 325 RELIGQLLNTHA 336
+E + ++N A
Sbjct: 251 QEDLNCIINLKA 262
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 110/259 (42%), Gaps = 27/259 (10%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQI-PRERQPQ-QITRAEYNLLSTLMHAHI 158
RY L +G G + V A D VA+K+I P E Q Q T E +L H +I
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENI 85
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
+ + + + E+ + L + ++ +IC + Q+ L +HS
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 145
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLPDLE-------------FASPEML 264
+ H+D++P N+L+N + LK+ D G PD + + +PE++
Sbjct: 146 NVLHRDLKPSNLLLNTTSDLKICDFGLARVAD----PDHDHTGFLTEYVATRWYRAPEIM 201
Query: 265 TSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQ---CGHIS 321
+ S D+WS+G +L +LS F + + HI + P ++ CG I+
Sbjct: 202 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI-LGILGSPSQEDLNCG-IN 259
Query: 322 VPARELIGQLLNTHADKRP 340
+ AR + L H +K P
Sbjct: 260 LKARNYLLSL--PHKNKVP 276
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 116/293 (39%), Gaps = 37/293 (12%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTA 161
YE E +G+G V+ A + VA+K+I E+ + + + H P
Sbjct: 17 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDEL-LKEIQAMSQCHHPNI 75
Query: 162 LALFENAPVPGTDTIVMQLVHGES---LIQHLC-----RQSTITESYICCIIRQLHSALH 213
++ + + V +VM+L+ G S +I+H+ + + ES I I+R++ L
Sbjct: 76 VSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLE 135
Query: 214 CLHSQQIAHKDIRPENILM--NGAVLKLIDLGXXXXXXXXXLPDLEFASPEMLTSPATAG 271
LH H+D++ NIL+ +G+V ++ D G + +P
Sbjct: 136 YLHKNGQIHRDVKAGNILLGEDGSV-QIADFGVSAFLATGGDITRNKVRKTFVGTPCWMA 194
Query: 272 P-----------STDMWSLGVLLYILLSGVSPF----------LDESEEETRAHISVADY 310
P D+WS G+ L +G +P+ L + V D
Sbjct: 195 PEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQD- 253
Query: 311 SFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEASCSEFDTER 363
E R++I L +KRPTA +LL+ +F +A EF E+
Sbjct: 254 ---KEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAKNKEFLQEK 303
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 103/252 (40%), Gaps = 31/252 (12%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQI-PRERQPQ-QITRAEYNLLSTLMHAHI 158
RY L +G G + V A D VA+K+I P E Q Q T E +L H +I
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
+ + + + E+ + L + ++ +IC + Q+ L +HS
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 143
Query: 219 QIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDLE-------------FASPEML 264
+ H+D++P N+L+N LK+ D G PD + + +PE++
Sbjct: 144 NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD----PDHDHTGFLTEYVATRWYRAPEIM 199
Query: 265 TSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPA 324
+ S D+WS+G +L +LS F + + HI G + P+
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI-----------LGILGSPS 248
Query: 325 RELIGQLLNTHA 336
+E + ++N A
Sbjct: 249 QEDLNCIINLKA 260
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 103/252 (40%), Gaps = 31/252 (12%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQI-PRERQPQ-QITRAEYNLLSTLMHAHI 158
RY L +G G + V A D VA+K+I P E Q Q T E +L H +I
Sbjct: 32 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 91
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
+ + + + E+ + L + ++ +IC + Q+ L +HS
Sbjct: 92 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 151
Query: 219 QIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDLE-------------FASPEML 264
+ H+D++P N+L+N LK+ D G PD + + +PE++
Sbjct: 152 NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD----PDHDHTGFLTEYVATRWYRAPEIM 207
Query: 265 TSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPA 324
+ S D+WS+G +L +LS F + + HI G + P+
Sbjct: 208 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI-----------LGILGSPS 256
Query: 325 RELIGQLLNTHA 336
+E + ++N A
Sbjct: 257 QEDLNCIINLKA 268
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 103/252 (40%), Gaps = 31/252 (12%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQI-PRERQPQ-QITRAEYNLLSTLMHAHI 158
RY L +G G + V A D VA+K+I P E Q Q T E +L H +I
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
+ + + + E+ + L + ++ +IC + Q+ L +HS
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 143
Query: 219 QIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDLE-------------FASPEML 264
+ H+D++P N+L+N LK+ D G PD + + +PE++
Sbjct: 144 NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD----PDHDHTGFLTEYVATRWYRAPEIM 199
Query: 265 TSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPA 324
+ S D+WS+G +L +LS F + + HI G + P+
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI-----------LGILGSPS 248
Query: 325 RELIGQLLNTHA 336
+E + ++N A
Sbjct: 249 QEDLNCIINLKA 260
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 103/252 (40%), Gaps = 31/252 (12%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQI-PRERQPQ-QITRAEYNLLSTLMHAHI 158
RY L +G G + V A D VA+K+I P E Q Q T E +L H +I
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
+ + + + E+ + L + ++ +IC + Q+ L +HS
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 143
Query: 219 QIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDLE-------------FASPEML 264
+ H+D++P N+L+N LK+ D G PD + + +PE++
Sbjct: 144 NVLHRDLKPSNLLLNTTXDLKICDFGLARVAD----PDHDHTGFLTEYVATRWYRAPEIM 199
Query: 265 TSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPA 324
+ S D+WS+G +L +LS F + + HI G + P+
Sbjct: 200 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI-----------LGILGSPS 248
Query: 325 RELIGQLLNTHA 336
+E + ++N A
Sbjct: 249 QEDLNCIINLKA 260
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 103/252 (40%), Gaps = 31/252 (12%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQI-PRERQPQ-QITRAEYNLLSTLMHAHI 158
RY L +G G + V A D VA+K+I P E Q Q T E +L H +I
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 85
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
+ + + + E+ + L + ++ +IC + Q+ L +HS
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 145
Query: 219 QIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDLE-------------FASPEML 264
+ H+D++P N+L+N LK+ D G PD + + +PE++
Sbjct: 146 NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD----PDHDHTGFLTEYVATRWYRAPEIM 201
Query: 265 TSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPA 324
+ S D+WS+G +L +LS F + + HI G + P+
Sbjct: 202 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI-----------LGILGSPS 250
Query: 325 RELIGQLLNTHA 336
+E + ++N A
Sbjct: 251 QEDLNCIINLKA 262
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 103/252 (40%), Gaps = 31/252 (12%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQI-PRERQPQ-QITRAEYNLLSTLMHAHI 158
RY L +G G + V A D VA+K+I P E Q Q T E +L H +I
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 103
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
+ + + + E+ + L + ++ +IC + Q+ L +HS
Sbjct: 104 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 163
Query: 219 QIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDLE-------------FASPEML 264
+ H+D++P N+L+N LK+ D G PD + + +PE++
Sbjct: 164 NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD----PDHDHTGFLTEYVATRWYRAPEIM 219
Query: 265 TSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPA 324
+ S D+WS+G +L +LS F + + HI G + P+
Sbjct: 220 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI-----------LGILGSPS 268
Query: 325 RELIGQLLNTHA 336
+E + ++N A
Sbjct: 269 QEDLNCIINLKA 280
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 103/252 (40%), Gaps = 31/252 (12%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQI-PRERQP-QQITRAEYNLLSTLMHAHI 158
RY L +G G + V A D VA+K+I P E Q Q T E +L H +I
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENI 87
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
+ + + + E+ + L + ++ +IC + Q+ L +HS
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 147
Query: 219 QIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDLE-------------FASPEML 264
+ H+D++P N+L+N LK+ D G PD + + +PE++
Sbjct: 148 NVLHRDLKPSNLLLNTTXDLKICDFGLARVAD----PDHDHTGFLTEYVATRWYRAPEIM 203
Query: 265 TSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPA 324
+ S D+WS+G +L +LS F + + HI G + P+
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI-----------LGILGSPS 252
Query: 325 RELIGQLLNTHA 336
+E + ++N A
Sbjct: 253 QEDLNCIINLKA 264
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 103/252 (40%), Gaps = 31/252 (12%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQI-PRERQPQ-QITRAEYNLLSTLMHAHI 158
RY L +G G + V A D VA+K+I P E Q Q T E +L H +I
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
+ + + + E+ + L + ++ +IC + Q+ L +HS
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 147
Query: 219 QIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDLE-------------FASPEML 264
+ H+D++P N+L+N LK+ D G PD + + +PE++
Sbjct: 148 NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD----PDHDHTGFLXEXVATRWYRAPEIM 203
Query: 265 TSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPA 324
+ S D+WS+G +L +LS F + + HI G + P+
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI-----------LGILGSPS 252
Query: 325 RELIGQLLNTHA 336
+E + ++N A
Sbjct: 253 QEDLNCIINLKA 264
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 103/252 (40%), Gaps = 31/252 (12%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQI-PRERQPQ-QITRAEYNLLSTLMHAHI 158
RY L +G G + V A D VA+K+I P E Q Q T E +L H +I
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 88
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
+ + + + E+ + L + ++ +IC + Q+ L +HS
Sbjct: 89 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 148
Query: 219 QIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDLE-------------FASPEML 264
+ H+D++P N+L+N LK+ D G PD + + +PE++
Sbjct: 149 NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD----PDHDHTGFLXEXVATRWYRAPEIM 204
Query: 265 TSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPA 324
+ S D+WS+G +L +LS F + + HI G + P+
Sbjct: 205 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI-----------LGILGSPS 253
Query: 325 RELIGQLLNTHA 336
+E + ++N A
Sbjct: 254 QEDLNCIINLKA 265
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 123/251 (49%), Gaps = 20/251 (7%)
Query: 107 RLGNGRFCTVRKARDRGTGQLVALKQIP-RERQPQQITRAEYNLLSTLMHAHIPTALALF 165
++G G V AR++ +G+ VA+K + R++Q +++ E ++ H ++ + ++
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNV---VEMY 108
Query: 166 ENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQIAHKDI 225
++ V ++M+ + G +L + Q + E I + + AL LH+Q + H+DI
Sbjct: 109 KSYLVGEELWVLMEFLQGGALTD-IVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDI 167
Query: 226 RPENIL--MNGAVLKLIDLGXXXXXXXXXLPDLE-------FASPEMLTSPATAGPSTDM 276
+ ++IL ++G V KL D G +P + + +PE+++ A D+
Sbjct: 168 KSDSILLTLDGRV-KLSDFG-FCAQISKDVPKRKXLVGTPYWMAPEVISRSLYA-TEVDI 224
Query: 277 WSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPA-RELIGQLLNTH 335
WSLG+++ ++ G P+ S+ +A + D P + H P R+ + ++L
Sbjct: 225 WSLGIMVIEMVDGEPPYF--SDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRD 282
Query: 336 ADKRPTAGQLL 346
+R TA +LL
Sbjct: 283 PQERATAQELL 293
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 103/252 (40%), Gaps = 31/252 (12%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQI-PRERQPQ-QITRAEYNLLSTLMHAHI 158
RY L +G G + V A D VA+K+I P E Q Q T E +L H +I
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 88
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
+ + + + E+ + L + ++ +IC + Q+ L +HS
Sbjct: 89 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 148
Query: 219 QIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDLE-------------FASPEML 264
+ H+D++P N+L+N LK+ D G PD + + +PE++
Sbjct: 149 NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD----PDHDHTGFLTEYVATRWYRAPEIM 204
Query: 265 TSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPA 324
+ S D+WS+G +L +LS F + + HI G + P+
Sbjct: 205 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI-----------LGILGSPS 253
Query: 325 RELIGQLLNTHA 336
+E + ++N A
Sbjct: 254 QEDLNCIINLKA 265
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 103/252 (40%), Gaps = 31/252 (12%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQI-PRERQPQ-QITRAEYNLLSTLMHAHI 158
RY L +G G + V A D VA+K+I P E Q Q T E +L H +I
Sbjct: 30 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 89
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
+ + + + E+ + L + ++ +IC + Q+ L +HS
Sbjct: 90 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 149
Query: 219 QIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDLE-------------FASPEML 264
+ H+D++P N+L+N LK+ D G PD + + +PE++
Sbjct: 150 NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD----PDHDHTGFLTEYVATRWYRAPEIM 205
Query: 265 TSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPA 324
+ S D+WS+G +L +LS F + + HI G + P+
Sbjct: 206 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI-----------LGILGSPS 254
Query: 325 RELIGQLLNTHA 336
+E + ++N A
Sbjct: 255 QEDLNCIINLKA 266
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 103/252 (40%), Gaps = 31/252 (12%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQI-PRERQPQ-QITRAEYNLLSTLMHAHI 158
RY L +G G + V A D VA+K+I P E Q Q T E +L H +I
Sbjct: 21 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 80
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
+ + + + E+ + L + ++ +IC + Q+ L +HS
Sbjct: 81 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 140
Query: 219 QIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDLE-------------FASPEML 264
+ H+D++P N+L+N LK+ D G PD + + +PE++
Sbjct: 141 NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD----PDHDHTGFLTEYVATRWYRAPEIM 196
Query: 265 TSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPA 324
+ S D+WS+G +L +LS F + + HI G + P+
Sbjct: 197 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI-----------LGILGSPS 245
Query: 325 RELIGQLLNTHA 336
+E + ++N A
Sbjct: 246 QEDLNCIINLKA 257
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 103/252 (40%), Gaps = 31/252 (12%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQI-PRERQPQ-QITRAEYNLLSTLMHAHI 158
RY L +G G + V A D VA+K+I P E Q Q T E +L H +I
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
+ + + + E+ + L + ++ +IC + Q+ L +HS
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 147
Query: 219 QIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDLE-------------FASPEML 264
+ H+D++P N+L+N LK+ D G PD + + +PE++
Sbjct: 148 NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD----PDHDHTGFLTEYVATRWYRAPEIM 203
Query: 265 TSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPA 324
+ S D+WS+G +L +LS F + + HI G + P+
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI-----------LGILGSPS 252
Query: 325 RELIGQLLNTHA 336
+E + ++N A
Sbjct: 253 QEDLNCIINLKA 264
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 103/252 (40%), Gaps = 31/252 (12%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQI-PRERQPQ-QITRAEYNLLSTLMHAHI 158
RY L +G G + V A D VA+K+I P E Q Q T E +L H +I
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
+ + + + E+ + L + ++ +IC + Q+ L +HS
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 147
Query: 219 QIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDLE-------------FASPEML 264
+ H+D++P N+L+N LK+ D G PD + + +PE++
Sbjct: 148 NVLHRDLKPSNLLLNTTXDLKICDFGLARVAD----PDHDHTGFLTEYVATRWYRAPEIM 203
Query: 265 TSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPA 324
+ S D+WS+G +L +LS F + + HI G + P+
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI-----------LGILGSPS 252
Query: 325 RELIGQLLNTHA 336
+E + ++N A
Sbjct: 253 QEDLNCIINLKA 264
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 103/252 (40%), Gaps = 31/252 (12%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQI-PRERQPQ-QITRAEYNLLSTLMHAHI 158
RY L +G G + V A D VA+K+I P E Q Q T E +L H +I
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 81
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
+ + + + E+ + L + ++ +IC + Q+ L +HS
Sbjct: 82 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 141
Query: 219 QIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDLE-------------FASPEML 264
+ H+D++P N+L+N LK+ D G PD + + +PE++
Sbjct: 142 NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD----PDHDHTGFLTEYVATRWYRAPEIM 197
Query: 265 TSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPA 324
+ S D+WS+G +L +LS F + + HI G + P+
Sbjct: 198 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI-----------LGILGSPS 246
Query: 325 RELIGQLLNTHA 336
+E + ++N A
Sbjct: 247 QEDLNCIINLKA 258
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 88/209 (42%), Gaps = 20/209 (9%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQI-PRERQPQ-QITRAEYNLLSTLMHAHI 158
RY L +G G + V A D VA+K+I P E Q Q T E +L H +I
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 81
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
+ + + + E+ + L + ++ +IC + Q+ L +HS
Sbjct: 82 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 141
Query: 219 QIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDLE-------------FASPEML 264
+ H+D++P N+L+N LK+ D G PD + + +PE++
Sbjct: 142 NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD----PDHDHTGFLTEYVATRWYRAPEIM 197
Query: 265 TSPATAGPSTDMWSLGVLLYILLSGVSPF 293
+ S D+WS+G +L +LS F
Sbjct: 198 LNSKGYTKSIDIWSVGCILAEMLSNRPIF 226
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 100/237 (42%), Gaps = 30/237 (12%)
Query: 90 ETRWQQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPR----ERQPQQITRA 145
E R Q++ FE L+ +G G F V + + TGQ+ A+K + + +R R
Sbjct: 55 EVRLQRDDFEI----LKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFRE 110
Query: 146 EYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR-QSTITESYICCI 204
E ++L I F++ +VM+ G L+ L + I
Sbjct: 111 ERDVLVNGDRRWITQLHFAFQDENYL---YLVMEYYVGGDLLTLLSKFGERIPAEMARFY 167
Query: 205 IRQLHSALHCLHSQQIAHKDIRPENILMN----------GAVLKLIDLGXXXXXXXXXLP 254
+ ++ A+ +H H+DI+P+NIL++ G+ LKL G P
Sbjct: 168 LAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTP 227
Query: 255 DLEFASPEMLTS------PATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI 305
D + SPE+L + + GP D W+LGV Y + G +PF +S ET I
Sbjct: 228 D--YLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKI 282
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 131/291 (45%), Gaps = 45/291 (15%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQI---TRAEYNLLSTLMHAH 157
+Y LE++G G + V KA++ G+ ALK+I E++ + I T E ++L L H++
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHL---CRQSTITESYICCIIRQLHSALHC 214
I + L++ + +V+ H + ++ L C + + +++ L+ +C
Sbjct: 62 I---VKLYD--VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 215 LHSQQIAHKDIRPENILMNG-AVLKLIDLGXXXX------XXXXXLPDLEFASPEMLTSP 267
H +++ H+D++P+N+L+N LK+ D G + L + +P++L
Sbjct: 117 -HDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGS 175
Query: 268 ATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI-------------SVADY-SFP 313
+ D+WS+G + +++G F SE + I +V + +
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYD 235
Query: 314 PEQCGHISVP-----------ARELIGQLLNTHADKRPTAGQLLQVAWFAE 353
P + +P +L+ ++L ++R TA Q L+ A+F E
Sbjct: 236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 131/291 (45%), Gaps = 45/291 (15%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQI---TRAEYNLLSTLMHAH 157
+Y LE++G G + V KA++ G+ ALK+I E++ + I T E ++L L H++
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHL---CRQSTITESYICCIIRQLHSALHC 214
I + L++ + +V+ H + ++ L C + + +++ L+ +C
Sbjct: 62 I---VKLYD--VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 215 LHSQQIAHKDIRPENILMNG-AVLKLIDLGXXXX------XXXXXLPDLEFASPEMLTSP 267
H +++ H+D++P+N+L+N LK+ D G + L + +P++L
Sbjct: 117 -HDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGS 175
Query: 268 ATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI-------------SVADY-SFP 313
+ D+WS+G + +++G F SE + I +V + +
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYD 235
Query: 314 PEQCGHISVP-----------ARELIGQLLNTHADKRPTAGQLLQVAWFAE 353
P + +P +L+ ++L ++R TA Q L+ A+F E
Sbjct: 236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 114/250 (45%), Gaps = 18/250 (7%)
Query: 107 RLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTALALFE 166
++G G V A ++ TG+ VA+K++ + + QQ +N + + H + ++
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKM--DLRKQQRRELLFNEVVIMRDYHHDNVVDMYS 109
Query: 167 NAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQIAHKDIR 226
+ V +VM+ + G +L + + + E I + + AL LH+Q + H+DI+
Sbjct: 110 SYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIK 168
Query: 227 PENILMNG-AVLKLIDLGXXXXXXXXXLPDLE-------FASPEMLTSPATAGPSTDMWS 278
++IL+ +KL D G +P + + +PE++ S G D+WS
Sbjct: 169 SDSILLTSDGRIKLSDFG-FCAQVSKEVPKRKXLVGTPYWMAPEVI-SRLPYGTEVDIWS 226
Query: 279 LGVLLYILLSGVSPFLDESEEETRAHISVADYSFPP--EQCGHISVPARELIGQLLNTHA 336
LG+++ ++ G P+ +E + I S PP + +S R + +L
Sbjct: 227 LGIMVIEMIDGEPPYFNEPPLQAMRRIR---DSLPPRVKDLHKVSSVLRGFLDLMLVREP 283
Query: 337 DKRPTAGQLL 346
+R TA +LL
Sbjct: 284 SQRATAQELL 293
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 131/291 (45%), Gaps = 45/291 (15%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQI---TRAEYNLLSTLMHAH 157
+Y LE++G G + V KA++ G+ ALK+I E++ + I T E ++L L H++
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHL---CRQSTITESYICCIIRQLHSALHC 214
I + L++ + +V+ H + ++ L C + + +++ L+ +C
Sbjct: 62 I---VKLYD--VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 215 LHSQQIAHKDIRPENILMNG-AVLKLIDLGXXXX------XXXXXLPDLEFASPEMLTSP 267
H +++ H+D++P+N+L+N LK+ D G + L + +P++L
Sbjct: 117 -HDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGS 175
Query: 268 ATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHI-------------SVADY-SFP 313
+ D+WS+G + +++G F SE + I +V + +
Sbjct: 176 KKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYD 235
Query: 314 PEQCGHISVP-----------ARELIGQLLNTHADKRPTAGQLLQVAWFAE 353
P + +P +L+ ++L ++R TA Q L+ A+F E
Sbjct: 236 PNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 108/274 (39%), Gaps = 23/274 (8%)
Query: 94 QQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER------QPQQITRAEY 147
++E E +Y+ LG+G F +V VA+K + ++R P
Sbjct: 2 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 61
Query: 148 NLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHG-ESLIQHLCRQSTITESYICCIIR 206
+L + + + L + P + ++++ + + L + + + E
Sbjct: 62 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFW 121
Query: 207 QLHSALHCLHSQQIAHKDIRPENIL--MNGAVLKLIDLGXXXXXXXXXLPDLE----FAS 260
Q+ A+ H+ + H+DI+ ENIL +N LKLID G D + ++
Sbjct: 122 QVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSP 181
Query: 261 PEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHI 320
PE + G S +WSLG+LLY ++ G PF + EE R + +
Sbjct: 182 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFRQ---------RV 231
Query: 321 SVPARELIGQLLNTHADKRPTAGQLLQVAWFAEA 354
S + LI L RPT ++ W +
Sbjct: 232 SSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 265
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 115/255 (45%), Gaps = 18/255 (7%)
Query: 92 RWQQEQ--FEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRA---- 145
+W + Q ++ + + LG G F V + R TG++ A K++ ++R ++ A
Sbjct: 174 KWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALN 233
Query: 146 EYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR--QSTITESYICC 203
E +L + + + +E +V+ L++G L H+ Q+ E+
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDAL---CLVLTLMNGGDLKFHIYHMGQAGFPEARAVF 290
Query: 204 IIRQLHSALHCLHSQQIAHKDIRPENILMNG-AVLKLIDLGXXX-----XXXXXXLPDLE 257
++ L LH ++I ++D++PENIL++ +++ DLG + +
Sbjct: 291 YAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVG 350
Query: 258 FASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQC 317
+ +PE++ + S D W+LG LLY +++G SPF ++ R + P E
Sbjct: 351 YMAPEVVKNERYTF-SPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYS 409
Query: 318 GHISVPARELIGQLL 332
S AR L QLL
Sbjct: 410 ERFSPQARSLCSQLL 424
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 103/252 (40%), Gaps = 31/252 (12%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQI-PRERQPQ-QITRAEYNLLSTLMHAHI 158
RY L +G G + V A D VA+K+I P E Q Q T E +L H +I
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
+ + + + E+ + L + ++ +IC + Q+ L +HS
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRGLKYIHSA 147
Query: 219 QIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDLE-------------FASPEML 264
+ H+D++P N+L+N LK+ D G PD + + +PE++
Sbjct: 148 NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD----PDHDHTGFLTEYVATRWYRAPEIM 203
Query: 265 TSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPA 324
+ S D+WS+G +L +LS F + + HI G + P+
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI-----------LGILGSPS 252
Query: 325 RELIGQLLNTHA 336
+E + ++N A
Sbjct: 253 QEDLNCIINLKA 264
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 96/209 (45%), Gaps = 22/209 (10%)
Query: 98 FEHRY-EELERLGNGRFCTVR----KARDRGTGQLVALKQIPRERQPQQIT--RAEYNLL 150
F RY +++ LG G F V + GTG++VA+K + + PQ + + E ++L
Sbjct: 28 FHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDIL 87
Query: 151 STLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHS 210
TL H HI E+A + +VM+ V SL +L R S I + + +Q+
Sbjct: 88 RTLYHEHIIKYKGCCEDAGA-ASLQLVMEYVPLGSLRDYLPRHS-IGLAQLLLFAQQICE 145
Query: 211 ALHCLHSQQIAHKDIRPENILM-NGAVLKLIDLGXXXXX----------XXXXLPDLEFA 259
+ LH+Q H+D+ N+L+ N ++K+ D G P +A
Sbjct: 146 GMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYA 205
Query: 260 SPEMLTSPATAGPSTDMWSLGVLLYILLS 288
PE L ++D+WS GV LY LL+
Sbjct: 206 -PECLKEYKFY-YASDVWSFGVTLYELLT 232
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 109/267 (40%), Gaps = 35/267 (13%)
Query: 88 PFETRWQQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQI-PRERQPQ-QITRA 145
P R Q RY L +G G + V A D VA+K+I P E Q Q T
Sbjct: 31 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR 90
Query: 146 EYNLLSTLMHAHIPTALALFENAPV--PGTDTIVMQLVHGESLIQHLCRQSTITESYICC 203
E +L H +I + AP D ++ + G L + L + ++ +IC
Sbjct: 91 EIKILLRFRHENI-IGINDIIRAPTIEQMKDVYLVTHLMGADLYK-LLKTQHLSNDHICY 148
Query: 204 IIRQLHSALHCLHSQQIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDLE----- 257
+ Q+ L +HS + H+D++P N+L+N LK+ D G PD +
Sbjct: 149 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVAD----PDHDHTGFL 204
Query: 258 --------FASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD 309
+ +PE++ + S D+WS+G +L +LS F + + HI
Sbjct: 205 TEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI---- 260
Query: 310 YSFPPEQCGHISVPARELIGQLLNTHA 336
G + P++E + ++N A
Sbjct: 261 -------LGILGSPSQEDLNCIINLKA 280
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 130/313 (41%), Gaps = 72/313 (23%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYN---LLSTLMHAHIPTALAL 164
+G+G + +V A D+ +G+ VA+K++ R Q + + Y LL + H ++ L +
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 165 FENA-------------PVPGTD-TIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHS 210
F A P TD +M L E IQ+L + Q+
Sbjct: 92 FTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYL--------------VYQMLK 137
Query: 211 ALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXXX---XXXXXXLPDLEFASPEMLTS 266
L +HS + H+D++P N+ +N LK++D G + + +PE++ S
Sbjct: 138 GLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILS 197
Query: 267 PATAGPSTDMWSLGVLLYILLSGVSPF-----LDE-------------------SEEETR 302
+ D+WS+G ++ +L+G + F LD+ +++ +
Sbjct: 198 WMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAK 257
Query: 303 AHISV------ADYS--FPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEA 354
++I D++ FP S A +L+ ++L DKR TA Q L +F
Sbjct: 258 SYIQSLPQTPRKDFTQLFP-----RASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPF 312
Query: 355 SCSEFDTERLLPF 367
E +TE PF
Sbjct: 313 RDPEEETEAQQPF 325
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 115/255 (45%), Gaps = 18/255 (7%)
Query: 92 RWQQEQ--FEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRA---- 145
+W + Q ++ + + LG G F V + R TG++ A K++ ++R ++ A
Sbjct: 174 KWLERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALN 233
Query: 146 EYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR--QSTITESYICC 203
E +L + + + +E +V+ L++G L H+ Q+ E+
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDAL---CLVLTLMNGGDLKFHIYHMGQAGFPEARAVF 290
Query: 204 IIRQLHSALHCLHSQQIAHKDIRPENILMNG-AVLKLIDLGXXX-----XXXXXXLPDLE 257
++ L LH ++I ++D++PENIL++ +++ DLG + +
Sbjct: 291 YAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVG 350
Query: 258 FASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQC 317
+ +PE++ + S D W+LG LLY +++G SPF ++ R + P E
Sbjct: 351 YMAPEVVKNERYTF-SPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYS 409
Query: 318 GHISVPARELIGQLL 332
S AR L QLL
Sbjct: 410 ERFSPQARSLCSQLL 424
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 131/300 (43%), Gaps = 46/300 (15%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYN---LLSTLMHAHIPTALAL 164
+G+G + +V A D+ +G+ VA+K++ R Q + + Y LL + H ++ L +
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 165 FENA-PVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQIAHK 223
F A + + + ++ +Q + +E I ++ Q+ L +HS + H+
Sbjct: 110 FTPASSLRNFYDFYLVMPFMQTDLQKIMGME-FSEEKIQYLVYQMLKGLKYIHSAGVVHR 168
Query: 224 DIRPENILMN-GAVLKLIDLGXXX---XXXXXXLPDLEFASPEMLTSPATAGPSTDMWSL 279
D++P N+ +N LK++D G + + +PE++ S + D+WS+
Sbjct: 169 DLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSV 228
Query: 280 GVLLYILLSGVSPF-----LDE-------------------SEEETRAHISV------AD 309
G ++ +L+G + F LD+ +++ +++I D
Sbjct: 229 GCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKD 288
Query: 310 YS--FPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEASCSEFDTERLLPF 367
++ FP S A +L+ ++L DKR TA Q L +F E +TE PF
Sbjct: 289 FTQLFP-----RASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDPEEETEAQQPF 343
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 103/252 (40%), Gaps = 31/252 (12%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQI-PRERQPQ-QITRAEYNLLSTLMHAHI 158
RY L +G G + V A D VA+++I P E Q Q T E +L H +I
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
+ + + + E+ + L + ++ +IC + Q+ L +HS
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA 147
Query: 219 QIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDLE-------------FASPEML 264
+ H+D++P N+L+N LK+ D G PD + + +PE++
Sbjct: 148 NVLHRDLKPSNLLLNTTCDLKICDFGLARVAD----PDHDHTGFLTEYVATRWYRAPEIM 203
Query: 265 TSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPA 324
+ S D+WS+G +L +LS F + + HI G + P+
Sbjct: 204 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHI-----------LGILGSPS 252
Query: 325 RELIGQLLNTHA 336
+E + ++N A
Sbjct: 253 QEDLNCIINLKA 264
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 107/276 (38%), Gaps = 27/276 (9%)
Query: 94 QQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER------QPQQITRAEY 147
++E E +Y+ LG+G F +V VA+K + ++R P
Sbjct: 18 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 77
Query: 148 NLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGE---SLIQHLCRQSTITESYICCI 204
+L + + + L + P D+ V+ L E L + + + E
Sbjct: 78 VVLLKKVSSGFSGVIRLLDWFERP--DSFVLILERPEPVQDLFDFITERGALQEELARSF 135
Query: 205 IRQLHSALHCLHSQQIAHKDIRPENIL--MNGAVLKLIDLGXXXXXXXXXLPDLE----F 258
Q+ A+ H+ + H+DI+ ENIL +N LKLID G D + +
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVY 195
Query: 259 ASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCG 318
+ PE + G S +WSLG+LLY ++ G PF + EE R +
Sbjct: 196 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFRQ--------- 245
Query: 319 HISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEA 354
+S + LI L RPT ++ W +
Sbjct: 246 RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 281
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 115/272 (42%), Gaps = 17/272 (6%)
Query: 96 EQFEHRYEELE---RLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLST 152
+ FE + ++LE LG G + V K R +GQ++A+K+I Q+ R +L +
Sbjct: 44 QNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDIS 103
Query: 153 LMHAHIPTALALFENAPVPGTDTIVMQLVH---GESLIQHLCRQSTITESYICCIIRQLH 209
+ P + + G I M+L+ + Q + + TI E + I +
Sbjct: 104 MRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIV 163
Query: 210 SALHCLHSQ-QIAHKDIRPENILMNG-AVLKLIDLGXXXXXXXXXLPDLE-----FASPE 262
AL LHS+ + H+D++P N+L+N +K+ D G ++ + +PE
Sbjct: 164 KALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPE 223
Query: 263 MLT---SPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGH 319
+ + +D+WSLG+ + L P+ D + V + P
Sbjct: 224 RINPELNQKGYSVKSDIWSLGITMIELAILRFPY-DSWGTPFQQLKQVVEEPSPQLPADK 282
Query: 320 ISVPARELIGQLLNTHADKRPTAGQLLQVAWF 351
S + Q L ++ +RPT +L+Q +F
Sbjct: 283 FSAEFVDFTSQCLKKNSKERPTYPELMQHPFF 314
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 105/285 (36%), Gaps = 45/285 (15%)
Query: 94 QQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP-------------- 139
++E E +Y+ LG+G F +V VA+K + ++R
Sbjct: 25 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 84
Query: 140 ----QQITRAEYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQST 195
++++ ++ L P + L P P D L + +
Sbjct: 85 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQD-----------LFDFITERGA 133
Query: 196 ITESYICCIIRQLHSALHCLHSQQIAHKDIRPENIL--MNGAVLKLIDLGXXXXXXXXXL 253
+ E Q+ A+ H+ + H+DI+ ENIL +N LKLID G
Sbjct: 134 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 193
Query: 254 PDLE----FASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD 309
D + ++ PE + G S +WSLG+LLY ++ G PF + EE R +
Sbjct: 194 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFRQ 252
Query: 310 YSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEA 354
+S + LI L RPT ++ W +
Sbjct: 253 ---------RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 288
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 111/275 (40%), Gaps = 38/275 (13%)
Query: 100 HRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER---------------------- 137
++Y + +G G + V+ A + A+K + +++
Sbjct: 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGG 72
Query: 138 --QPQQITRAEYNLLSTLMHAHIPTALALFENAPVPGTD--TIVMQLVHGESLIQHLCRQ 193
QP+ Y ++ L P + L E P D +V +LV+ + + +
Sbjct: 73 CIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVN-QGPVMEVPTL 131
Query: 194 STITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXXXXXX--- 249
++E + L + LH Q+I H+DI+P N+L+ +K+ D G
Sbjct: 132 KPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSD 191
Query: 250 ---XXXLPDLEFASPEML--TSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAH 304
+ F +PE L T +G + D+W++GV LY + G PF+DE +
Sbjct: 192 ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSK 251
Query: 305 ISVADYSFPPEQCGHISVPARELIGQLLNTHADKR 339
I FP + I+ ++LI ++L+ + + R
Sbjct: 252 IKSQALEFPDQP--DIAEDLKDLITRMLDKNPESR 284
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 105/285 (36%), Gaps = 45/285 (15%)
Query: 94 QQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP-------------- 139
++E E +Y+ LG+G F +V VA+K + ++R
Sbjct: 3 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 62
Query: 140 ----QQITRAEYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQST 195
++++ ++ L P + L P P D L + +
Sbjct: 63 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQD-----------LFDFITERGA 111
Query: 196 ITESYICCIIRQLHSALHCLHSQQIAHKDIRPENIL--MNGAVLKLIDLGXXXXXXXXXL 253
+ E Q+ A+ H+ + H+DI+ ENIL +N LKLID G
Sbjct: 112 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 171
Query: 254 PDLE----FASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD 309
D + ++ PE + G S +WSLG+LLY ++ G PF + EE R +
Sbjct: 172 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFRQ 230
Query: 310 YSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEA 354
+S + LI L RPT ++ W +
Sbjct: 231 ---------RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 266
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 105/285 (36%), Gaps = 45/285 (15%)
Query: 94 QQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP-------------- 139
++E E +Y+ LG+G F +V VA+K + ++R
Sbjct: 2 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 61
Query: 140 ----QQITRAEYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQST 195
++++ ++ L P + L P P D L + +
Sbjct: 62 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQD-----------LFDFITERGA 110
Query: 196 ITESYICCIIRQLHSALHCLHSQQIAHKDIRPENIL--MNGAVLKLIDLGXXXXXXXXXL 253
+ E Q+ A+ H+ + H+DI+ ENIL +N LKLID G
Sbjct: 111 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 170
Query: 254 PDLE----FASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD 309
D + ++ PE + G S +WSLG+LLY ++ G PF + EE R +
Sbjct: 171 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFRQ 229
Query: 310 YSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEA 354
+S + LI L RPT ++ W +
Sbjct: 230 ---------RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 265
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 107/276 (38%), Gaps = 27/276 (9%)
Query: 94 QQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER------QPQQITRAEY 147
++E E +Y+ LG+G F +V VA+K + ++R P
Sbjct: 17 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 76
Query: 148 NLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGE---SLIQHLCRQSTITESYICCI 204
+L + + + L + P D+ V+ L E L + + + E
Sbjct: 77 VVLLKKVSSGFSGVIRLLDWFERP--DSFVLILERPEPVQDLFDFITERGALQEELARSF 134
Query: 205 IRQLHSALHCLHSQQIAHKDIRPENIL--MNGAVLKLIDLGXXXXXXXXXLPDLE----F 258
Q+ A+ H+ + H+DI+ ENIL +N LKLID G D + +
Sbjct: 135 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVY 194
Query: 259 ASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCG 318
+ PE + G S +WSLG+LLY ++ G PF + EE R +
Sbjct: 195 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFRQ--------- 244
Query: 319 HISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEA 354
+S + LI L RPT ++ W +
Sbjct: 245 RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 280
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 110/262 (41%), Gaps = 14/262 (5%)
Query: 103 EELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTAL 162
E + LG G + V K R +GQ++A+K+I Q+ R +L ++ P +
Sbjct: 10 EPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTV 69
Query: 163 ALFENAPVPGTDTIVMQLVH---GESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ- 218
+ G I M+L+ + Q + + TI E + I + AL LHS+
Sbjct: 70 TFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL 129
Query: 219 QIAHKDIRPENILMNG-AVLKLIDLGXXXXXXXXXLPDLE-----FASPEMLT---SPAT 269
+ H+D++P N+L+N +K+ D G D++ + +PE + +
Sbjct: 130 SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKG 189
Query: 270 AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIG 329
+D+WSLG+ + L P+ D + V + P S +
Sbjct: 190 YSVKSDIWSLGITMIELAILRFPY-DSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTS 248
Query: 330 QLLNTHADKRPTAGQLLQVAWF 351
Q L ++ +RPT +L+Q +F
Sbjct: 249 QCLKKNSKERPTYPELMQHPFF 270
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 107/276 (38%), Gaps = 27/276 (9%)
Query: 94 QQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER------QPQQITRAEY 147
++E E +Y+ LG+G F +V VA+K + ++R P
Sbjct: 18 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 77
Query: 148 NLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGE---SLIQHLCRQSTITESYICCI 204
+L + + + L + P D+ V+ L E L + + + E
Sbjct: 78 VVLLKKVSSGFSGVIRLLDWFERP--DSFVLILERPEPVQDLFDFITERGALQEELARSF 135
Query: 205 IRQLHSALHCLHSQQIAHKDIRPENIL--MNGAVLKLIDLGXXXXXXXXXLPDLE----F 258
Q+ A+ H+ + H+DI+ ENIL +N LKLID G D + +
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVY 195
Query: 259 ASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCG 318
+ PE + G S +WSLG+LLY ++ G PF + EE R +
Sbjct: 196 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFRQ--------- 245
Query: 319 HISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEA 354
+S + LI L RPT ++ W +
Sbjct: 246 RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 281
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 107/276 (38%), Gaps = 27/276 (9%)
Query: 94 QQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER------QPQQITRAEY 147
++E E +Y+ LG+G F +V VA+K + ++R P
Sbjct: 17 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 76
Query: 148 NLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGE---SLIQHLCRQSTITESYICCI 204
+L + + + L + P D+ V+ L E L + + + E
Sbjct: 77 VVLLKKVSSGFSGVIRLLDWFERP--DSFVLILERPEPVQDLFDFITERGALQEELARSF 134
Query: 205 IRQLHSALHCLHSQQIAHKDIRPENIL--MNGAVLKLIDLGXXXXXXXXXLPDLE----F 258
Q+ A+ H+ + H+DI+ ENIL +N LKLID G D + +
Sbjct: 135 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVY 194
Query: 259 ASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCG 318
+ PE + G S +WSLG+LLY ++ G PF + EE R +
Sbjct: 195 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFRQ--------- 244
Query: 319 HISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEA 354
+S + LI L RPT ++ W +
Sbjct: 245 RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 280
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 105/285 (36%), Gaps = 45/285 (15%)
Query: 94 QQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP-------------- 139
++E E +Y+ LG+G F +V VA+K + ++R
Sbjct: 1 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 60
Query: 140 ----QQITRAEYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQST 195
++++ ++ L P + L P P D L + +
Sbjct: 61 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQD-----------LFDFITERGA 109
Query: 196 ITESYICCIIRQLHSALHCLHSQQIAHKDIRPENIL--MNGAVLKLIDLGXXXXXXXXXL 253
+ E Q+ A+ H+ + H+DI+ ENIL +N LKLID G
Sbjct: 110 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 169
Query: 254 PDLE----FASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD 309
D + ++ PE + G S +WSLG+LLY ++ G PF + EE R +
Sbjct: 170 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFRQ 228
Query: 310 YSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEA 354
+S + LI L RPT ++ W +
Sbjct: 229 ---------RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 264
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 105/285 (36%), Gaps = 45/285 (15%)
Query: 94 QQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP-------------- 139
++E E +Y+ LG+G F +V VA+K + ++R
Sbjct: 3 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 62
Query: 140 ----QQITRAEYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQST 195
++++ ++ L P + L P P D L + +
Sbjct: 63 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQD-----------LFDFITERGA 111
Query: 196 ITESYICCIIRQLHSALHCLHSQQIAHKDIRPENIL--MNGAVLKLIDLGXXXXXXXXXL 253
+ E Q+ A+ H+ + H+DI+ ENIL +N LKLID G
Sbjct: 112 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 171
Query: 254 PDLE----FASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD 309
D + ++ PE + G S +WSLG+LLY ++ G PF + EE R +
Sbjct: 172 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFRQ 230
Query: 310 YSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEA 354
+S + LI L RPT ++ W +
Sbjct: 231 ---------RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 266
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 105/285 (36%), Gaps = 45/285 (15%)
Query: 94 QQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP-------------- 139
++E E +Y+ LG+G F +V VA+K + ++R
Sbjct: 3 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 62
Query: 140 ----QQITRAEYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQST 195
++++ ++ L P + L P P D L + +
Sbjct: 63 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQD-----------LFDFITERGA 111
Query: 196 ITESYICCIIRQLHSALHCLHSQQIAHKDIRPENIL--MNGAVLKLIDLGXXXXXXXXXL 253
+ E Q+ A+ H+ + H+DI+ ENIL +N LKLID G
Sbjct: 112 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 171
Query: 254 PDLE----FASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD 309
D + ++ PE + G S +WSLG+LLY ++ G PF + EE R +
Sbjct: 172 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFRQ 230
Query: 310 YSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEA 354
+S + LI L RPT ++ W +
Sbjct: 231 ---------RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 266
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 107/276 (38%), Gaps = 27/276 (9%)
Query: 94 QQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER------QPQQITRAEY 147
++E E +Y+ LG+G F +V VA+K + ++R P
Sbjct: 18 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 77
Query: 148 NLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGE---SLIQHLCRQSTITESYICCI 204
+L + + + L + P D+ V+ L E L + + + E
Sbjct: 78 VVLLKKVSSGFSGVIRLLDWFERP--DSFVLILERPEPVQDLFDFITERGALQEELARSF 135
Query: 205 IRQLHSALHCLHSQQIAHKDIRPENIL--MNGAVLKLIDLGXXXXXXXXXLPDLE----F 258
Q+ A+ H+ + H+DI+ ENIL +N LKLID G D + +
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVY 195
Query: 259 ASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCG 318
+ PE + G S +WSLG+LLY ++ G PF + EE R +
Sbjct: 196 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFRQ--------- 245
Query: 319 HISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEA 354
+S + LI L RPT ++ W +
Sbjct: 246 RVSXECQHLIRWCLALRPXDRPTFEEIQNHPWMQDV 281
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 105/285 (36%), Gaps = 45/285 (15%)
Query: 94 QQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP-------------- 139
++E E +Y+ LG+G F +V VA+K + ++R
Sbjct: 45 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 104
Query: 140 ----QQITRAEYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQST 195
++++ ++ L P + L P P D L + +
Sbjct: 105 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQD-----------LFDFITERGA 153
Query: 196 ITESYICCIIRQLHSALHCLHSQQIAHKDIRPENIL--MNGAVLKLIDLGXXXXXXXXXL 253
+ E Q+ A+ H+ + H+DI+ ENIL +N LKLID G
Sbjct: 154 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 213
Query: 254 PDLE----FASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD 309
D + ++ PE + G S +WSLG+LLY ++ G PF + EE R +
Sbjct: 214 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFRQ 272
Query: 310 YSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEA 354
+S + LI L RPT ++ W +
Sbjct: 273 ---------RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 308
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 105/285 (36%), Gaps = 45/285 (15%)
Query: 94 QQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP-------------- 139
++E E +Y+ LG+G F +V VA+K + ++R
Sbjct: 45 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 104
Query: 140 ----QQITRAEYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQST 195
++++ ++ L P + L P P D L + +
Sbjct: 105 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQD-----------LFDFITERGA 153
Query: 196 ITESYICCIIRQLHSALHCLHSQQIAHKDIRPENIL--MNGAVLKLIDLGXXXXXXXXXL 253
+ E Q+ A+ H+ + H+DI+ ENIL +N LKLID G
Sbjct: 154 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 213
Query: 254 PDLE----FASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD 309
D + ++ PE + G S +WSLG+LLY ++ G PF + EE R +
Sbjct: 214 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFRQ 272
Query: 310 YSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEA 354
+S + LI L RPT ++ W +
Sbjct: 273 ---------RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 308
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 107/276 (38%), Gaps = 27/276 (9%)
Query: 94 QQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER------QPQQITRAEY 147
++E E +Y+ LG+G F +V VA+K + ++R P
Sbjct: 37 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 96
Query: 148 NLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGE---SLIQHLCRQSTITESYICCI 204
+L + + + L + P D+ V+ L E L + + + E
Sbjct: 97 VVLLKKVSSGFSGVIRLLDWFERP--DSFVLILERPEPVQDLFDFITERGALQEELARSF 154
Query: 205 IRQLHSALHCLHSQQIAHKDIRPENIL--MNGAVLKLIDLGXXXXXXXXXLPDLE----F 258
Q+ A+ H+ + H+DI+ ENIL +N LKLID G D + +
Sbjct: 155 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVY 214
Query: 259 ASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCG 318
+ PE + G S +WSLG+LLY ++ G PF + EE R +
Sbjct: 215 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFRQ--------- 264
Query: 319 HISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEA 354
+S + LI L RPT ++ W +
Sbjct: 265 RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 300
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 105/285 (36%), Gaps = 45/285 (15%)
Query: 94 QQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP-------------- 139
++E E +Y+ LG+G F +V VA+K + ++R
Sbjct: 30 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 89
Query: 140 ----QQITRAEYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQST 195
++++ ++ L P + L P P D L + +
Sbjct: 90 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQD-----------LFDFITERGA 138
Query: 196 ITESYICCIIRQLHSALHCLHSQQIAHKDIRPENIL--MNGAVLKLIDLGXXXXXXXXXL 253
+ E Q+ A+ H+ + H+DI+ ENIL +N LKLID G
Sbjct: 139 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 198
Query: 254 PDLE----FASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD 309
D + ++ PE + G S +WSLG+LLY ++ G PF + EE R +
Sbjct: 199 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFRQ 257
Query: 310 YSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEA 354
+S + LI L RPT ++ W +
Sbjct: 258 ---------RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 293
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 107/276 (38%), Gaps = 27/276 (9%)
Query: 94 QQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER------QPQQITRAEY 147
++E E +Y+ LG+G F +V VA+K + ++R P
Sbjct: 50 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 109
Query: 148 NLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGE---SLIQHLCRQSTITESYICCI 204
+L + + + L + P D+ V+ L E L + + + E
Sbjct: 110 VVLLKKVSSGFSGVIRLLDWFERP--DSFVLILERPEPVQDLFDFITERGALQEELARSF 167
Query: 205 IRQLHSALHCLHSQQIAHKDIRPENIL--MNGAVLKLIDLGXXXXXXXXXLPDLE----F 258
Q+ A+ H+ + H+DI+ ENIL +N LKLID G D + +
Sbjct: 168 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVY 227
Query: 259 ASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCG 318
+ PE + G S +WSLG+LLY ++ G PF + EE R +
Sbjct: 228 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFRQ--------- 277
Query: 319 HISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEA 354
+S + LI L RPT ++ W +
Sbjct: 278 RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 313
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 126/315 (40%), Gaps = 47/315 (14%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQ---QITRAEYNLLSTLM-HA 156
+YE +++LG G + V K+ DR TG++VA+K+I Q Q T E +L+ L H
Sbjct: 10 KYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHE 69
Query: 157 HIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLH 216
+I L + + + + E+ + + R + + + ++ QL + LH
Sbjct: 70 NIVNLLNVLR---ADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIKYLH 126
Query: 217 SQQIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXX----------------------- 252
S + H+D++P NIL+N +K+ D G
Sbjct: 127 SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPI 186
Query: 253 LPDLE----FASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA 308
L D + +PE+L DMWSLG +L +L G P S + +
Sbjct: 187 LTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG-KPIFPGSSTMNQLERIIG 245
Query: 309 DYSFPP-EQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFA-------EASCSE-- 358
FP E I P + + + L + R + + + W +A C+E
Sbjct: 246 VIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEA 305
Query: 359 FD-TERLLPFSARRK 372
D ++LL F+ ++
Sbjct: 306 LDLLDKLLQFNPNKR 320
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRE--RQPQQITRAEYNLLSTLMHAHIP 159
++ L +G G + V R + T ++ A+K + +E + I + ++ P
Sbjct: 7 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 66
Query: 160 TALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQ 219
+ L V++ V+G L+ H+ RQ + E + ++ AL+ LH +
Sbjct: 67 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 126
Query: 220 IAHKDIRPENILMNG-AVLKLIDLGX--------XXXXXXXXLPDLEFASPEMLTSPATA 270
I ++D++ +N+L++ +KL D G P+ + +PE+L
Sbjct: 127 IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPN--YIAPEILRG-EDY 183
Query: 271 GPSTDMWSLGVLLYILLSGVSPF 293
G S D W+LGVL++ +++G SPF
Sbjct: 184 GFSVDWWALGVLMFEMMAGRSPF 206
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 94/203 (46%), Gaps = 14/203 (6%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRE--RQPQQITRAEYNLLSTLMHAHIP 159
++ L +G G + V R + T ++ A+K + +E + I + ++ P
Sbjct: 22 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 81
Query: 160 TALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQ 219
+ L V++ V+G L+ H+ RQ + E + ++ AL+ LH +
Sbjct: 82 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 141
Query: 220 IAHKDIRPENILMNG-AVLKLIDLGX--------XXXXXXXXLPDLEFASPEMLTSPATA 270
I ++D++ +N+L++ +KL D G P+ + +PE+L
Sbjct: 142 IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPN--YIAPEILRG-EDY 198
Query: 271 GPSTDMWSLGVLLYILLSGVSPF 293
G S D W+LGVL++ +++G SPF
Sbjct: 199 GFSVDWWALGVLMFEMMAGRSPF 221
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 34/213 (15%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRE------------RQPQQITRAEYNL 149
++ L +G G + V R + T ++ A+K + +E + +A +
Sbjct: 11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 70
Query: 150 LSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLH 209
+H+ T LF V++ V+G L+ H+ RQ + E + ++
Sbjct: 71 FLVGLHSCFQTESRLF----------FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEIS 120
Query: 210 SALHCLHSQQIAHKDIRPENILMNG-AVLKLIDLGX--------XXXXXXXXLPDLEFAS 260
AL+ LH + I ++D++ +N+L++ +KL D G P+ + +
Sbjct: 121 LALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPN--YIA 178
Query: 261 PEMLTSPATAGPSTDMWSLGVLLYILLSGVSPF 293
PE+L G S D W+LGVL++ +++G SPF
Sbjct: 179 PEILRG-EDYGFSVDWWALGVLMFEMMAGRSPF 210
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 113/260 (43%), Gaps = 22/260 (8%)
Query: 98 FEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQ-IPRERQPQQITRAEYNLLSTLMHA 156
F+ ++ L RLG+G + V K R + G+L A+K+ + R P+ R + S
Sbjct: 55 FQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVG 114
Query: 157 HIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQ--STITESYICCIIRQLHSALHC 214
P + L E A G + + G SL QH C +++ E+ + +R AL
Sbjct: 115 QHPCCVRL-EQAWEEGGILYLQTELCGPSLQQH-CEAWGASLPEAQVWGYLRDTLLALAH 172
Query: 215 LHSQQIAHKDIRPENILMN-------GAVLKLIDLGXXXXXXXXXLPDLEFASPEMLTSP 267
LHSQ + H D++P NI + G L++LG D + +PE+L
Sbjct: 173 LHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQE-GDPRYMAPELLQ-- 229
Query: 268 ATAGPSTDMWSLGV-LLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARE 326
+ G + D++SLG+ +L + + P E ++ R PPE +S R
Sbjct: 230 GSYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGY------LPPEFTAGLSSELRS 283
Query: 327 LIGQLLNTHADKRPTAGQLL 346
++ +L R TA LL
Sbjct: 284 VLVMMLEPDPKLRATAEALL 303
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 118/276 (42%), Gaps = 22/276 (7%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAHI 158
+E++ LG G V K + +G ++A K I E +P QI R L L +
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRE----LQVLHECNS 63
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCI-IRQLHSALHCLHS 217
P + + G +I M+ + G SL Q L + I E + + I + +
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 218 QQIAHKDIRPENILMNG-AVLKLIDLGXXXXXXXXXLPDL----EFASPEMLTSPATAGP 272
+I H+D++P NIL+N +KL D G + SPE L +
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYS-V 182
Query: 273 STDMWSLGVLLYILLSGVSPF-LDESEEETR---AHISVADY--SFPPEQ--CGHISVPA 324
+D+WS+G+ L + G P +++E++R A + DY + PP + G S+
Sbjct: 183 QSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEF 242
Query: 325 RELIGQLLNTHADKRPTAGQLLQVAWFAEASCSEFD 360
++ + + L + +R QL+ A+ + E D
Sbjct: 243 QDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEVD 278
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 115/265 (43%), Gaps = 23/265 (8%)
Query: 99 EHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQ-QITRAEYNLLSTLMHAH 157
E +E + LG+G F V KA+++ T L A K I + + + + E ++L++ H
Sbjct: 36 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDH-- 93
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR-QSTITESYICCIIRQLHSALHCLH 216
P + L + I+++ G ++ + + +TES I + +Q AL+ LH
Sbjct: 94 -PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH 152
Query: 217 SQQIAHKDIRPENIL--MNGAVLKLIDLGXXXXXXXXXLPDLEFASPEMLTSPATAGPST 274
+I H+D++ NIL ++G + KL D G F +P T
Sbjct: 153 DNKIIHRDLKAGNILFTLDGDI-KLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCET 211
Query: 275 ----------DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPP--EQCGHISV 322
D+WSLG+ L I ++ + P E R + +A S PP Q S
Sbjct: 212 SKDRPYDYKADVWSLGITL-IEMAEIEPPHHEL-NPMRVLLKIAK-SEPPTLAQPSRWSS 268
Query: 323 PARELIGQLLNTHADKRPTAGQLLQ 347
++ + + L + D R T QLLQ
Sbjct: 269 NFKDFLKKCLEKNVDARWTTSQLLQ 293
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 102/281 (36%), Gaps = 45/281 (16%)
Query: 98 FEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP------------------ 139
E +Y+ LG+G F +V VA+K + ++R
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 140 QQITRAEYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITES 199
++++ ++ L P + L P P D L + + + E
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQD-----------LFDFITERGALQEE 110
Query: 200 YICCIIRQLHSALHCLHSQQIAHKDIRPENIL--MNGAVLKLIDLGXXXXXXXXXLPDLE 257
Q+ A+ H+ + H+DI+ ENIL +N LKLID G D +
Sbjct: 111 LARSFFWQVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD 170
Query: 258 ----FASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFP 313
++ PE + G S +WSLG+LLY ++ G PF + EE R +
Sbjct: 171 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFRQ---- 225
Query: 314 PEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEA 354
+S + LI L RPT ++ W +
Sbjct: 226 -----RVSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 261
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 114/272 (41%), Gaps = 20/272 (7%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAHI 158
+E++ LG G V K + +G ++A K I E +P QI R L L +
Sbjct: 27 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRE----LQVLHECNS 82
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCI-IRQLHSALHCLHS 217
P + + G +I M+ + G SL Q L + I E + + I + +
Sbjct: 83 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 142
Query: 218 QQIAHKDIRPENILMNG-AVLKLIDLGXXX----XXXXXXLPDLEFASPEMLTSPATAGP 272
+I H+D++P NIL+N +KL D G + + SPE L +
Sbjct: 143 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYS-V 201
Query: 273 STDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADY--SFPPEQ--CGHISVPARELI 328
+D+WS+G+ L + G P S + A + DY + PP + G S+ ++ +
Sbjct: 202 QSDIWSMGLSLVEMAVGRYPI--GSGSGSMAIFELLDYIVNEPPPKLPSGVFSLEFQDFV 259
Query: 329 GQLLNTHADKRPTAGQLLQVAWFAEASCSEFD 360
+ L + +R QL+ A+ + E D
Sbjct: 260 NKCLIKNPAERADLKQLMVHAFIKRSDAEEVD 291
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 116/265 (43%), Gaps = 23/265 (8%)
Query: 99 EHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQ-QITRAEYNLLSTLMHAH 157
E +E + LG+G F V KA+++ T L A K I + + + + E ++L++ H
Sbjct: 36 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDH-- 93
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR-QSTITESYICCIIRQLHSALHCLH 216
P + L + I+++ G ++ + + +TES I + +Q AL+ LH
Sbjct: 94 -PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH 152
Query: 217 SQQIAHKDIRPENIL--MNGAVLKLIDLGXXXXXXXXXLPDLEFASPEMLTSPATAGPST 274
+I H+D++ NIL ++G + KL D G F +P T
Sbjct: 153 DNKIIHRDLKAGNILFTLDGDI-KLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCET 211
Query: 275 ----------DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPP--EQCGHISV 322
D+WSLG+ L I ++ + P E R + +A S PP Q S
Sbjct: 212 SKDRPYDYKADVWSLGITL-IEMAEIEPPHHEL-NPMRVLLKIAK-SEPPTLAQPSRWSS 268
Query: 323 PARELIGQLLNTHADKRPTAGQLLQ 347
++ + + L + D R T QLLQ
Sbjct: 269 NFKDFLKKCLEKNVDARWTTSQLLQ 293
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 116/265 (43%), Gaps = 23/265 (8%)
Query: 99 EHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQ-QITRAEYNLLSTLMHAH 157
E +E + LG+G F V KA+++ T L A K I + + + + E ++L++ H
Sbjct: 36 EDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDH-- 93
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR-QSTITESYICCIIRQLHSALHCLH 216
P + L + I+++ G ++ + + +TES I + +Q AL+ LH
Sbjct: 94 -PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLH 152
Query: 217 SQQIAHKDIRPENIL--MNGAVLKLIDLGXXXXXXXXXLPDLEFASPEMLTSPATAGPST 274
+I H+D++ NIL ++G + KL D G F +P T
Sbjct: 153 DNKIIHRDLKAGNILFTLDGDI-KLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCET 211
Query: 275 ----------DMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPP--EQCGHISV 322
D+WSLG+ L I ++ + P E R + +A S PP Q S
Sbjct: 212 SKDRPYDYKADVWSLGITL-IEMAEIEPPHHEL-NPMRVLLKIAK-SEPPTLAQPSRWSS 268
Query: 323 PARELIGQLLNTHADKRPTAGQLLQ 347
++ + + L + D R T QLLQ
Sbjct: 269 NFKDFLKKCLEKNVDARWTTSQLLQ 293
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 95/213 (44%), Gaps = 34/213 (15%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRE------------RQPQQITRAEYNL 149
++ L +G G + V R + T ++ A++ + +E + +A +
Sbjct: 54 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHP 113
Query: 150 LSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLH 209
+H+ T LF V++ V+G L+ H+ RQ + E + ++
Sbjct: 114 FLVGLHSCFQTESRLF----------FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEIS 163
Query: 210 SALHCLHSQQIAHKDIRPENILMNG-AVLKLIDLGX--------XXXXXXXXLPDLEFAS 260
AL+ LH + I ++D++ +N+L++ +KL D G P+ + +
Sbjct: 164 LALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPN--YIA 221
Query: 261 PEMLTSPATAGPSTDMWSLGVLLYILLSGVSPF 293
PE+L G S D W+LGVL++ +++G SPF
Sbjct: 222 PEILRG-EDYGFSVDWWALGVLMFEMMAGRSPF 253
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 94/218 (43%), Gaps = 28/218 (12%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRE--RQPQQITR--AEYNLLSTLMHA 156
RYE E LG G V ARD + VA+K + + R P R E + L H
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH- 71
Query: 157 HIPTALALFENA-------PVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLH 209
P +A+++ P+P IVM+ V G +L + + +T +I
Sbjct: 72 --PAIVAVYDTGEAETPAGPLP---YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADAC 126
Query: 210 SALHCLHSQQIAHKDIRPENILMN----------GAVLKLIDLGXXXXXXXXXLPDLEFA 259
AL+ H I H+D++P NIL++ G + D G + ++
Sbjct: 127 QALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYL 186
Query: 260 SPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDES 297
SPE + S D++SLG +LY +L+G PF +S
Sbjct: 187 SPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDS 223
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 100/235 (42%), Gaps = 29/235 (12%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRE--RQPQQITR--AEYNLLSTLMHA 156
RYE E LG G V ARD + VA+K + + R P R E + L H
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH- 71
Query: 157 HIPTALALFENA-------PVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLH 209
P +A+++ P+P IVM+ V G +L + + +T +I
Sbjct: 72 --PAIVAVYDTGEAETPAGPLP---YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADAC 126
Query: 210 SALHCLHSQQIAHKDIRPENILMN----------GAVLKLIDLGXXXXXXXXXLPDLEFA 259
AL+ H I H+D++P NI+++ G + D G + ++
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 186
Query: 260 SPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPP 314
SPE + S D++SLG +LY +L+G PF +S + A+ V + PP
Sbjct: 187 SPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDSPDSV-AYQHVREDPIPP 239
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 91/231 (39%), Gaps = 37/231 (16%)
Query: 94 QQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP-------------- 139
++E E +Y+ LG+G F +V VA+K + ++R
Sbjct: 31 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 90
Query: 140 ----QQITRAEYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQST 195
++++ ++ L P + L P P D L + +
Sbjct: 91 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQD-----------LFDFITERGA 139
Query: 196 ITESYICCIIRQLHSALHCLHSQQIAHKDIRPENIL--MNGAVLKLIDLGXXXXXXXXXL 253
+ E Q+ A+ H+ + H+DI+ ENIL +N LKLID G
Sbjct: 140 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 199
Query: 254 PDLE----FASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEE 300
D + ++ PE + G S +WSLG+LLY ++ G PF E +EE
Sbjct: 200 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEE 248
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 110/276 (39%), Gaps = 27/276 (9%)
Query: 94 QQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRER------QPQQITRAEY 147
++E E +Y+ LG+G F +V VA+K + ++R P
Sbjct: 30 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 89
Query: 148 NLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGE---SLIQHLCRQSTITESYICCI 204
+L + + + L + P D+ V+ L E L + + + E
Sbjct: 90 VVLLKKVSSGFSGVIRLLDWFERP--DSFVLILERPEPVQDLFDFITERGALQEELARSF 147
Query: 205 IRQLHSALHCLHSQQIAHKDIRPENIL--MNGAVLKLIDLGXXXXXXXXXLPDLE----F 258
Q+ A+ H+ + H+DI+ ENIL +N LKLID G D + +
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVY 207
Query: 259 ASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCG 318
+ PE + G S +WSLG+LLY ++ G PF E +EE + F ++
Sbjct: 208 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEI-----IGGQVFFRQR-- 258
Query: 319 HISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEA 354
+S + LI L RPT ++ W +
Sbjct: 259 -VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 293
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 91/231 (39%), Gaps = 37/231 (16%)
Query: 94 QQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP-------------- 139
++E E +Y+ LG+G F +V VA+K + ++R
Sbjct: 31 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 90
Query: 140 ----QQITRAEYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQST 195
++++ ++ L P + L P P D L + +
Sbjct: 91 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQD-----------LFDFITERGA 139
Query: 196 ITESYICCIIRQLHSALHCLHSQQIAHKDIRPENIL--MNGAVLKLIDLGXXXXXXXXXL 253
+ E Q+ A+ H+ + H+DI+ ENIL +N LKLID G
Sbjct: 140 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 199
Query: 254 PDLE----FASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEE 300
D + ++ PE + G S +WSLG+LLY ++ G PF E +EE
Sbjct: 200 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEE 248
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 91/231 (39%), Gaps = 37/231 (16%)
Query: 94 QQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP-------------- 139
++E E +Y+ LG+G F +V VA+K + ++R
Sbjct: 30 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 89
Query: 140 ----QQITRAEYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQST 195
++++ ++ L P + L P P D L + +
Sbjct: 90 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQD-----------LFDFITERGA 138
Query: 196 ITESYICCIIRQLHSALHCLHSQQIAHKDIRPENIL--MNGAVLKLIDLGXXXXXXXXXL 253
+ E Q+ A+ H+ + H+DI+ ENIL +N LKLID G
Sbjct: 139 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 198
Query: 254 PDLE----FASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEE 300
D + ++ PE + G S +WSLG+LLY ++ G PF E +EE
Sbjct: 199 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEE 247
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 91/231 (39%), Gaps = 37/231 (16%)
Query: 94 QQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP-------------- 139
++E E +Y+ LG+G F +V VA+K + ++R
Sbjct: 31 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 90
Query: 140 ----QQITRAEYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQST 195
++++ ++ L P + L P P D L + +
Sbjct: 91 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQD-----------LFDFITERGA 139
Query: 196 ITESYICCIIRQLHSALHCLHSQQIAHKDIRPENIL--MNGAVLKLIDLGXXXXXXXXXL 253
+ E Q+ A+ H+ + H+DI+ ENIL +N LKLID G
Sbjct: 140 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 199
Query: 254 PDLE----FASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEE 300
D + ++ PE + G S +WSLG+LLY ++ G PF E +EE
Sbjct: 200 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEE 248
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 108/285 (37%), Gaps = 45/285 (15%)
Query: 94 QQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP-------------- 139
++E E +Y+ LG+G F +V VA+K + ++R
Sbjct: 31 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 90
Query: 140 ----QQITRAEYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQST 195
++++ ++ L P + L P P D L + +
Sbjct: 91 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQD-----------LFDFITERGA 139
Query: 196 ITESYICCIIRQLHSALHCLHSQQIAHKDIRPENIL--MNGAVLKLIDLGXXXXXXXXXL 253
+ E Q+ A+ H+ + H+DI+ ENIL +N LKLID G
Sbjct: 140 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 199
Query: 254 PDLE----FASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVAD 309
D + ++ PE + G S +WSLG+LLY ++ G PF E +EE +
Sbjct: 200 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEI-----IGG 252
Query: 310 YSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEA 354
F ++ +S + LI L RPT ++ W +
Sbjct: 253 QVFFRQR---VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 294
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 91/231 (39%), Gaps = 37/231 (16%)
Query: 94 QQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP-------------- 139
++E E +Y+ LG+G F +V VA+K + ++R
Sbjct: 30 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPME 89
Query: 140 ----QQITRAEYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQST 195
++++ ++ L P + L P P D L + +
Sbjct: 90 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQD-----------LFDFITERGA 138
Query: 196 ITESYICCIIRQLHSALHCLHSQQIAHKDIRPENIL--MNGAVLKLIDLGXXXXXXXXXL 253
+ E Q+ A+ H+ + H+DI+ ENIL +N LKLID G
Sbjct: 139 LQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVY 198
Query: 254 PDLE----FASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEE 300
D + ++ PE + G S +WSLG+LLY ++ G PF E +EE
Sbjct: 199 TDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEE 247
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 100/218 (45%), Gaps = 23/218 (10%)
Query: 96 EQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMH 155
EQ E Y + +GNG F V +A+ + + VA+K++ Q ++ E ++ + H
Sbjct: 36 EQREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKV---LQDKRFKNRELQIMRIVKH 91
Query: 156 AHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQS--------TITESYICCIIRQ 207
++ A F + D + + LV E + + + R S T+ I + Q
Sbjct: 92 PNVVDLKAFFYSNG-DKKDEVFLNLVL-EYVPETVYRASRHYAKLKQTMPMLLIKLYMYQ 149
Query: 208 LHSALHCLHSQQIAHKDIRPENILMN--GAVLKLIDLGXXXXXXXXXLPDLE------FA 259
L +L +HS I H+DI+P+N+L++ VLKLID G P++ +
Sbjct: 150 LLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE-PNVSXICSRYYR 208
Query: 260 SPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDES 297
+PE++ + D+WS G ++ L+ G F ES
Sbjct: 209 APELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGES 246
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 93/218 (42%), Gaps = 28/218 (12%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRE--RQPQQITR--AEYNLLSTLMHA 156
RYE E LG G V ARD + VA+K + + R P R E + L H
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH- 71
Query: 157 HIPTALALFENA-------PVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLH 209
P +A+++ P+P IVM+ V G +L + + +T +I
Sbjct: 72 --PAIVAVYDTGEAETPAGPLP---YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADAC 126
Query: 210 SALHCLHSQQIAHKDIRPENILMN----------GAVLKLIDLGXXXXXXXXXLPDLEFA 259
AL+ H I H+D++P NI+++ G + D G + ++
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 186
Query: 260 SPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDES 297
SPE + S D++SLG +LY +L+G PF +S
Sbjct: 187 SPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDS 223
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 102/281 (36%), Gaps = 45/281 (16%)
Query: 98 FEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP------------------ 139
E +Y+ LG+G F +V VA+K + ++R
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 140 QQITRAEYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITES 199
++++ ++ L P + L P P D L + + + E
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQD-----------LFDFITERGALQEE 110
Query: 200 YICCIIRQLHSALHCLHSQQIAHKDIRPENIL--MNGAVLKLIDLGXXXXXXXXXLPDLE 257
Q+ A+ H+ + H+DI+ ENIL +N LKLID G D +
Sbjct: 111 LARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD 170
Query: 258 ----FASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFP 313
++ PE + G S +WSLG+LLY ++ G PF + EE R +
Sbjct: 171 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIRGQVFFRQ---- 225
Query: 314 PEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEA 354
+S + LI L RPT ++ W +
Sbjct: 226 -----RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 261
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 93/222 (41%), Gaps = 23/222 (10%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRA--EYNLLSTLMHAHI 158
RY +L+ LG G V A D + VA+K+I PQ + A E ++ L H +I
Sbjct: 12 RYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT-DPQSVKHALREIKIIRRLDHDNI 70
Query: 159 PTALALFENAPVPGTD---------TIVMQLVHGESLIQHLCRQSTITESYICCIIRQLH 209
+ + TD ++ + + E+ + ++ Q + E + + QL
Sbjct: 71 VKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLL 130
Query: 210 SALHCLHSQQIAHKDIRPENILMN--GAVLKLIDLGXXXXX---------XXXXLPDLEF 258
L +HS + H+D++P N+ +N VLK+ D G L +
Sbjct: 131 RGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWY 190
Query: 259 ASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEE 300
SP +L SP + DMW+ G + +L+G + F E E
Sbjct: 191 RSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELE 232
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 90/215 (41%), Gaps = 22/215 (10%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRE--RQPQQITR--AEYNLLSTLMHA 156
RYE E LG G V ARD + VA+K + + R P R E + L H
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHP 72
Query: 157 HIPTALALFEN----APVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSAL 212
I A E P+P IVM+ V G +L + + +T +I AL
Sbjct: 73 AIVAVYATGEAETPAGPLP---YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQAL 129
Query: 213 HCLHSQQIAHKDIRPENILMN----------GAVLKLIDLGXXXXXXXXXLPDLEFASPE 262
+ H I H+D++P NI+++ G + D G + ++ SPE
Sbjct: 130 NFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE 189
Query: 263 MLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDES 297
+ S D++SLG +LY +L+G PF +S
Sbjct: 190 QARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDS 223
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 93/218 (42%), Gaps = 28/218 (12%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRE--RQPQQITR--AEYNLLSTLMHA 156
RYE E LG G V ARD + VA+K + + R P R E + L H
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH- 71
Query: 157 HIPTALALFENA-------PVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLH 209
P +A+++ P+P IVM+ V G +L + + +T +I
Sbjct: 72 --PAIVAVYDTGEAETPAGPLP---YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADAC 126
Query: 210 SALHCLHSQQIAHKDIRPENILMN----------GAVLKLIDLGXXXXXXXXXLPDLEFA 259
AL+ H I H+D++P NI+++ G + D G + ++
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 186
Query: 260 SPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDES 297
SPE + S D++SLG +LY +L+G PF +S
Sbjct: 187 SPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDS 223
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 93/218 (42%), Gaps = 28/218 (12%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRE--RQPQQITR--AEYNLLSTLMHA 156
RYE E LG G V ARD + VA+K + + R P R E + L H
Sbjct: 30 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH- 88
Query: 157 HIPTALALFENA-------PVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLH 209
P +A+++ P+P IVM+ V G +L + + +T +I
Sbjct: 89 --PAIVAVYDTGEAETPAGPLP---YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADAC 143
Query: 210 SALHCLHSQQIAHKDIRPENILMN----------GAVLKLIDLGXXXXXXXXXLPDLEFA 259
AL+ H I H+D++P NI+++ G + D G + ++
Sbjct: 144 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 203
Query: 260 SPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDES 297
SPE + S D++SLG +LY +L+G PF +S
Sbjct: 204 SPEQARGDSVDARS-DVYSLGCVLYEVLTGEPPFTGDS 240
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 118/270 (43%), Gaps = 45/270 (16%)
Query: 91 TRWQQEQFEHRYEELERL-GNGRFCTVRKARDRGTGQLVALKQI---PRERQPQ-QITRA 145
+R + ++F+ +ER+ G G F TV+ +++ TG VA+K++ PR R + QI +
Sbjct: 18 SRKEMDRFQ-----VERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQD 72
Query: 146 EYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLV--HGESLIQHLC-----RQSTITE 198
L+ L H +I + F I + +V + + C RQ
Sbjct: 73 ----LAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPP 128
Query: 199 SYICCIIRQLHSALHCLH--SQQIAHKDIRPENILMNGA--VLKLIDLGXXXXXXXXXLP 254
I + QL ++ CLH S + H+DI+P N+L+N A LKL D G P
Sbjct: 129 ILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSE-P 187
Query: 255 DLEFA------SPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFL-DESEEETRAHISV 307
++ + +PE++ + D+WS+G + ++ G F D S + + V
Sbjct: 188 NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRV 247
Query: 308 ADYSFPPEQCGHISVPARELIGQLLNTHAD 337
+ P+RE++ +L +H D
Sbjct: 248 ------------LGCPSREVLRKLNPSHTD 265
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 112/285 (39%), Gaps = 37/285 (12%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTA 161
YE E +G+G V+ A + VA+K+I E+ + + + H P
Sbjct: 12 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDEL-LKEIQAMSQCHHPNI 70
Query: 162 LALFENAPVPGTDTIVMQLVHGES---LIQHLC-----RQSTITESYICCIIRQLHSALH 213
++ + + V +VM+L+ G S +I+H+ + + ES I I+R++ L
Sbjct: 71 VSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLE 130
Query: 214 CLHSQQIAHKDIRPENILM--NGAVLKLIDLGXXXXXXXXXLPDLEFASPEMLTSPATAG 271
LH H+D++ NIL+ +G+V ++ D G + +P
Sbjct: 131 YLHKNGQIHRDVKAGNILLGEDGSV-QIADFGVSAFLATGGDITRNKVRKTFVGTPCWMA 189
Query: 272 P-----------STDMWSLGVLLYILLSGVSPF----------LDESEEETRAHISVADY 310
P D+WS G+ L +G +P+ L + V D
Sbjct: 190 PEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQD- 248
Query: 311 SFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEAS 355
E R++I L +KRPTA +LL+ +F +A
Sbjct: 249 ---KEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAK 290
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 71/177 (40%), Gaps = 16/177 (9%)
Query: 184 ESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQIAHKDIRPENIL--MNGAVLKLID 241
+ L + + + E Q+ A+ H+ + H+DI+ ENIL +N LKLID
Sbjct: 142 QDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLID 201
Query: 242 LGXXXXXXXXXLPDLE----FASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDES 297
G D + ++ PE + G S +WSLG+LLY ++ G PF +
Sbjct: 202 FGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHD 260
Query: 298 EEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAEA 354
EE R + +S + LI L RPT ++ W +
Sbjct: 261 EEIIRGQVFFRQ---------RVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV 308
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 29/200 (14%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRA--EYNLLSTLMHAHIPTALAL- 164
LG G + V A + TG++VA+K+I +P R E +L H +I T +
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQ 78
Query: 165 ----FENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQI 220
FEN I+ +L+ + + + +++ +I I Q A+ LH +
Sbjct: 79 RPDSFENF---NEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNV 133
Query: 221 AHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDLE----------------FASPEM 263
H+D++P N+L+N LK+ D G + E + +PE+
Sbjct: 134 IHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEV 193
Query: 264 LTSPATAGPSTDMWSLGVLL 283
+ + A + D+WS G +L
Sbjct: 194 MLTSAKYSRAMDVWSCGCIL 213
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 29/200 (14%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRA--EYNLLSTLMHAHIPTALAL- 164
LG G + V A + TG++VA+K+I +P R E +L H +I T +
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQ 78
Query: 165 ----FENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQI 220
FEN I+ +L+ + + + +++ +I I Q A+ LH +
Sbjct: 79 RPDSFENF---NEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNV 133
Query: 221 AHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDLE----------------FASPEM 263
H+D++P N+L+N LK+ D G + E + +PE+
Sbjct: 134 IHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEV 193
Query: 264 LTSPATAGPSTDMWSLGVLL 283
+ + A + D+WS G +L
Sbjct: 194 MLTSAKYSRAMDVWSCGCIL 213
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 88/227 (38%), Gaps = 37/227 (16%)
Query: 98 FEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP------------------ 139
E +Y+ LG+G F +V VA+K + ++R
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLL 61
Query: 140 QQITRAEYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITES 199
++++ ++ L P + L P P D L + + + E
Sbjct: 62 KKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQD-----------LFDFITERGALQEE 110
Query: 200 YICCIIRQLHSALHCLHSQQIAHKDIRPENIL--MNGAVLKLIDLGXXXXXXXXXLPDLE 257
Q+ A+ H+ + H+DI+ ENIL +N LKLID G D +
Sbjct: 111 LARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFD 170
Query: 258 ----FASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEE 300
++ PE + G S +WSLG+LLY ++ G PF E +EE
Sbjct: 171 GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEE 215
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 93/209 (44%), Gaps = 22/209 (10%)
Query: 98 FEHRY-EELERLGNGRFCTVR----KARDRGTGQLVALKQIPRERQPQQIT--RAEYNLL 150
F RY +++ LG G F V + GTG++VA+K + + PQ + + E ++L
Sbjct: 11 FHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDIL 70
Query: 151 STLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHS 210
TL H HI E+ +VM+ V SL +L R S I + + +Q+
Sbjct: 71 RTLYHEHIIKYKGCCEDQGEKSLQ-LVMEYVPLGSLRDYLPRHS-IGLAQLLLFAQQICE 128
Query: 211 ALHCLHSQQIAHKDIRPENILM-NGAVLKLIDLGXXXXX----------XXXXLPDLEFA 259
+ LHSQ H+++ N+L+ N ++K+ D G P +A
Sbjct: 129 GMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA 188
Query: 260 SPEMLTSPATAGPSTDMWSLGVLLYILLS 288
PE L S D+WS GV LY LL+
Sbjct: 189 -PECLKEYKFYYAS-DVWSFGVTLYELLT 215
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 29/200 (14%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRA--EYNLLSTLMHAHIPTALAL- 164
LG G + V A + TG++VA+K+I +P R E +L H +I T +
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQ 78
Query: 165 ----FENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQI 220
FEN I+ +L+ + + + +++ +I I Q A+ LH +
Sbjct: 79 RPDSFENF---NEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNV 133
Query: 221 AHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDLE----------------FASPEM 263
H+D++P N+L+N LK+ D G + E + +PE+
Sbjct: 134 IHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEV 193
Query: 264 LTSPATAGPSTDMWSLGVLL 283
+ + A + D+WS G +L
Sbjct: 194 MLTSAKYSRAMDVWSCGCIL 213
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 109/272 (40%), Gaps = 17/272 (6%)
Query: 96 EQFEHRYEELE---RLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLST 152
E FE + ++LE LG G + V K R +GQ+ A+K+I Q+ R +L +
Sbjct: 27 ENFEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDIS 86
Query: 153 LMHAHIPTALALFENAPVPGTDTIVMQLVH---GESLIQHLCRQSTITESYICCIIRQLH 209
P + + G I +L + Q + + TI E + I +
Sbjct: 87 XRTVDCPFTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIV 146
Query: 210 SALHCLHSQ-QIAHKDIRPENILMNG-AVLKLIDLGXXXXXXXXXLPDLE-----FASPE 262
AL LHS+ + H+D++P N+L+N +K D G D++ + +PE
Sbjct: 147 KALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPE 206
Query: 263 MLT---SPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGH 319
+ + +D+WSLG+ L P+ D + V + P
Sbjct: 207 RINPELNQKGYSVKSDIWSLGITXIELAILRFPY-DSWGTPFQQLKQVVEEPSPQLPADK 265
Query: 320 ISVPARELIGQLLNTHADKRPTAGQLLQVAWF 351
S + Q L ++ +RPT +L Q +F
Sbjct: 266 FSAEFVDFTSQCLKKNSKERPTYPELXQHPFF 297
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 84/201 (41%), Gaps = 14/201 (6%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAHI 158
+E + LG G V K + R +G ++A K I E +P QI R L L +
Sbjct: 18 FERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRE----LQVLHECNS 73
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCI-IRQLHSALHCLHS 217
P + + G +I M+ + G SL Q L I E + + I L +
Sbjct: 74 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREK 133
Query: 218 QQIAHKDIRPENILMNG-AVLKLIDLGXXX----XXXXXXLPDLEFASPEMLTSPATAGP 272
QI H+D++P NIL+N +KL D G + + +PE L +
Sbjct: 134 HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMAPERLQGTHYS-V 192
Query: 273 STDMWSLGVLLYILLSGVSPF 293
+D+WS+G+ L L G P
Sbjct: 193 QSDIWSMGLSLVELAVGRYPI 213
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 97/214 (45%), Gaps = 21/214 (9%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRA---EYNLLSTLMHAH 157
RY + +LG G + V KA D T + VA+K+I E + + + E +LL L H +
Sbjct: 35 RYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRN 94
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGES-LIQHLCRQSTITESYICCIIRQLHSALHCLH 216
I ++ + + + + E+ L +++ + ++ I + QL + ++ H
Sbjct: 95 IIELKSVIHH-----NHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCH 149
Query: 217 SQQIAHKDIRPENILMNGA------VLKLIDLGXXXX------XXXXXLPDLEFASPEML 264
S++ H+D++P+N+L++ + VLK+ D G + L + PE+L
Sbjct: 150 SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEIL 209
Query: 265 TSPATAGPSTDMWSLGVLLYILLSGVSPFLDESE 298
S D+WS+ + +L F +SE
Sbjct: 210 LGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSE 243
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 107/256 (41%), Gaps = 20/256 (7%)
Query: 106 ERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTALALF 165
+R+G+G F TV K + G + L Q Q + E +L H +I LF
Sbjct: 18 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI----LLF 73
Query: 166 ENAPVPGTDTIVMQLVHGESLIQHLCRQSTITE-SYICCIIRQLHSALHCLHSQQIAHKD 224
IV Q G SL HL T E + I RQ + LH++ I H+D
Sbjct: 74 MGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRD 133
Query: 225 IRPENILMN-GAVLKLIDLGXXXXXXX--------XXLPDLEFASPEMLTSPATAGPS-- 273
++ NI ++ +K+ D G + + +PE++ + S
Sbjct: 134 LKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 193
Query: 274 TDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCG-HISVPAR--ELIGQ 330
+D+++ G++LY L++G P+ + + + + V S P+ + P R L+ +
Sbjct: 194 SDVYAFGIVLYELMTGQLPYSNINNRDQIIEM-VGRGSLSPDLSKVRSNCPKRMKRLMAE 252
Query: 331 LLNTHADKRPTAGQLL 346
L D+RP+ ++L
Sbjct: 253 CLKKKRDERPSFPRIL 268
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 21/167 (12%)
Query: 204 IIRQLHSALHCLHSQQIAHKDIRPENILM--------------NGAVLKLIDLGXXXXXX 249
+++Q S L LHS I H+D++P NIL+ + + K + +G
Sbjct: 123 LLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSR 182
Query: 250 XXXLPDLE-FASPEMLTSPATAGP--STDMWSLGVLLYILLS-GVSPFLDESEEETRAHI 305
+P E + +PEML+ P + D++S G + Y ++S G PF + + +
Sbjct: 183 RSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILL 242
Query: 306 SVADYS-FPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWF 351
PE+ H V ARELI +++ KRP+A +L+ +F
Sbjct: 243 GACSLDCLHPEK--HEDVIARELIEKMIAMDPQKRPSAKHVLKHPFF 287
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 107/256 (41%), Gaps = 20/256 (7%)
Query: 106 ERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTALALF 165
+R+G+G F TV K + G + L Q Q + E +L H +I LF
Sbjct: 30 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI----LLF 85
Query: 166 ENAPVPGTDTIVMQLVHGESLIQHLCRQSTITE-SYICCIIRQLHSALHCLHSQQIAHKD 224
IV Q G SL HL T E + I RQ + LH++ I H+D
Sbjct: 86 MGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRD 145
Query: 225 IRPENILMN-GAVLKLIDLGXXXXXXX--------XXLPDLEFASPEMLTSPATAGPS-- 273
++ NI ++ +K+ D G + + +PE++ + S
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 205
Query: 274 TDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCG-HISVPAR--ELIGQ 330
+D+++ G++LY L++G P+ + + + + V S P+ + P R L+ +
Sbjct: 206 SDVYAFGIVLYELMTGQLPYSNINNRDQIIEM-VGRGSLSPDLSKVRSNCPKRMKRLMAE 264
Query: 331 LLNTHADKRPTAGQLL 346
L D+RP+ ++L
Sbjct: 265 CLKKKRDERPSFPRIL 280
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 107/256 (41%), Gaps = 20/256 (7%)
Query: 106 ERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTALALF 165
+R+G+G F TV K + G + L Q Q + E +L H +I LF
Sbjct: 30 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI----LLF 85
Query: 166 ENAPVPGTDTIVMQLVHGESLIQHLCRQSTITE-SYICCIIRQLHSALHCLHSQQIAHKD 224
IV Q G SL HL T E + I RQ + LH++ I H+D
Sbjct: 86 MGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRD 145
Query: 225 IRPENILMN-GAVLKLIDLGXXXXXXX--------XXLPDLEFASPEMLTSPATAGPS-- 273
++ NI ++ +K+ D G + + +PE++ + S
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 205
Query: 274 TDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCG-HISVPAR--ELIGQ 330
+D+++ G++LY L++G P+ + + + + V S P+ + P R L+ +
Sbjct: 206 SDVYAFGIVLYELMTGQLPYSNINNRDQIIEM-VGRGSLSPDLSKVRSNCPKRMKRLMAE 264
Query: 331 LLNTHADKRPTAGQLL 346
L D+RP+ ++L
Sbjct: 265 CLKKKRDERPSFPRIL 280
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 93/209 (44%), Gaps = 22/209 (10%)
Query: 98 FEHRY-EELERLGNGRFCTVR----KARDRGTGQLVALKQIPRERQPQQIT--RAEYNLL 150
F RY +++ LG G F V + GTG++VA+K + + PQ + + E ++L
Sbjct: 11 FHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDIL 70
Query: 151 STLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHS 210
TL H HI E+ +VM+ V SL +L R S I + + +Q+
Sbjct: 71 RTLYHEHIIKYKGCCEDQGEKSLQ-LVMEYVPLGSLRDYLPRHS-IGLAQLLLFAQQICE 128
Query: 211 ALHCLHSQQIAHKDIRPENILM-NGAVLKLIDLGXXXXX----------XXXXLPDLEFA 259
+ LH+Q H+++ N+L+ N ++K+ D G P +A
Sbjct: 129 GMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA 188
Query: 260 SPEMLTSPATAGPSTDMWSLGVLLYILLS 288
PE L S D+WS GV LY LL+
Sbjct: 189 -PECLKEYKFYYAS-DVWSFGVTLYELLT 215
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 101/258 (39%), Gaps = 14/258 (5%)
Query: 99 EHRYEELERLGNGRFCTVRKARDRGTGQLVALKQI----PRERQPQQITRAEYNLLSTLM 154
E + +L +G+G F V ARD ++VA+K++ + + Q E L L
Sbjct: 14 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 73
Query: 155 HAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHC 214
H P + T +VM+ G + + + E I + L
Sbjct: 74 H---PNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAY 130
Query: 215 LHSQQIAHKDIRPENILMNG-AVLKLIDLGXXXXX--XXXXLPDLEFASPEMLTS--PAT 269
LHS + H+D++ NIL++ ++KL D G + + +PE++ +
Sbjct: 131 LHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQ 190
Query: 270 AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIG 329
D+WSLG+ L P + + HI A P Q GH S R +
Sbjct: 191 YDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI--AQNESPALQSGHWSEYFRNFVD 248
Query: 330 QLLNTHADKRPTAGQLLQ 347
L RPT+ LL+
Sbjct: 249 SCLQKIPQDRPTSEVLLK 266
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 18/255 (7%)
Query: 106 ERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTALALF 165
+R+G+G F TV K + G + L Q Q + E +L H +I LF
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI----LLF 69
Query: 166 ENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESY-ICCIIRQLHSALHCLHSQQIAHKD 224
IV Q G SL HL T E + I RQ + LH++ I H+D
Sbjct: 70 MGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRD 129
Query: 225 IRPENILMN-GAVLKLIDLGXXXXXXX--------XXLPDLEFASPEMLTSPATAGPS-- 273
++ NI ++ +K+ D G + + +PE++ S
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 274 TDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPA--RELIGQL 331
+D+++ G++LY L++G P+ + + + + Y P + P + L+ +
Sbjct: 190 SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAEC 249
Query: 332 LNTHADKRPTAGQLL 346
L D+RP Q+L
Sbjct: 250 LKKKRDERPLFPQIL 264
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 18/255 (7%)
Query: 106 ERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTALALF 165
+R+G+G F TV K + G + L Q Q + E +L H +I LF
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI----LLF 69
Query: 166 ENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESY-ICCIIRQLHSALHCLHSQQIAHKD 224
IV Q G SL HL T E + I RQ + LH++ I H+D
Sbjct: 70 MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRD 129
Query: 225 IRPENILMN-GAVLKLIDLGXXXXXXX--------XXLPDLEFASPEMLTSPATAGPS-- 273
++ NI ++ +K+ D G + + +PE++ S
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 274 TDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPA--RELIGQL 331
+D+++ G++LY L++G P+ + + + + Y P + P + L+ +
Sbjct: 190 SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAEC 249
Query: 332 LNTHADKRPTAGQLL 346
L D+RP Q+L
Sbjct: 250 LKKKRDERPLFPQIL 264
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 94/204 (46%), Gaps = 14/204 (6%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYN---LLSTLMHAH 157
RY++L+ +G+G V A D G VA+K++ R Q Q + Y LL + H +
Sbjct: 25 RYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKN 84
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR--QSTITESYICCIIRQLHSALHCL 215
I + L +F P + + E + +LC+ + + ++ Q+ + L
Sbjct: 85 IISLLNVF--TPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHL 142
Query: 216 HSQQIAHKDIRPENILMNG-AVLKLIDLGXXXXXXXXXL--PDL---EFASPEMLTSPAT 269
HS I H+D++P NI++ LK++D G + P + + +PE++
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGY 202
Query: 270 AGPSTDMWSLGVLLYILLSGVSPF 293
A + D+WS+G ++ L+ G F
Sbjct: 203 AA-NVDIWSVGCIMGELVKGCVIF 225
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 18/255 (7%)
Query: 106 ERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTALALF 165
+R+G+G F TV K + G + L Q Q + E +L H +I LF
Sbjct: 16 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI----LLF 71
Query: 166 ENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESY-ICCIIRQLHSALHCLHSQQIAHKD 224
IV Q G SL HL T E + I RQ + LH++ I H+D
Sbjct: 72 MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRD 131
Query: 225 IRPENILMN-GAVLKLIDLGXXXXXXX--------XXLPDLEFASPEMLTSPATAGPS-- 273
++ NI ++ +K+ D G + + +PE++ S
Sbjct: 132 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 191
Query: 274 TDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPA--RELIGQL 331
+D+++ G++LY L++G P+ + + + + Y P + P + L+ +
Sbjct: 192 SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAEC 251
Query: 332 LNTHADKRPTAGQLL 346
L D+RP Q+L
Sbjct: 252 LKKKRDERPLFPQIL 266
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 80/208 (38%), Gaps = 23/208 (11%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRAEYNLLSTLMHAHIPTALALF 165
LG G V + R + TG L A+K +P + E+ +L L H +I A+
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAI- 75
Query: 166 ENAPVPGTDTIVMQLVHGESLIQHLCRQST---ITESYICCIIRQLHSALHCLHSQQIAH 222
E ++M+ SL L S + ES ++R + ++ L I H
Sbjct: 76 EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVH 135
Query: 223 KDIRPENILM-----NGAVLKLIDLGXXXX-----XXXXXLPDLEFASPEMLTSPA---- 268
++I+P NI+ +V KL D G E+ P+M
Sbjct: 136 RNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKD 195
Query: 269 ---TAGPSTDMWSLGVLLYILLSGVSPF 293
G + D+WS+GV Y +G PF
Sbjct: 196 HQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 18/255 (7%)
Query: 106 ERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTALALF 165
+R+G+G F TV K + G + L Q Q + E +L H +I LF
Sbjct: 19 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI----LLF 74
Query: 166 ENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESY-ICCIIRQLHSALHCLHSQQIAHKD 224
IV Q G SL HL T E + I RQ + LH++ I H+D
Sbjct: 75 MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRD 134
Query: 225 IRPENILMN-GAVLKLIDLGXXXXXXX--------XXLPDLEFASPEMLTSPATAGPS-- 273
++ NI ++ +K+ D G + + +PE++ S
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 194
Query: 274 TDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPA--RELIGQL 331
+D+++ G++LY L++G P+ + + + + Y P + P + L+ +
Sbjct: 195 SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAEC 254
Query: 332 LNTHADKRPTAGQLL 346
L D+RP Q+L
Sbjct: 255 LKKKRDERPLFPQIL 269
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 18/255 (7%)
Query: 106 ERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTALALF 165
+R+G+G F TV K + G + L Q Q + E +L H +I LF
Sbjct: 19 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI----LLF 74
Query: 166 ENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESY-ICCIIRQLHSALHCLHSQQIAHKD 224
IV Q G SL HL T E + I RQ + LH++ I H+D
Sbjct: 75 MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRD 134
Query: 225 IRPENILMN-GAVLKLIDLGXXXXXXX--------XXLPDLEFASPEMLTSPATAGPS-- 273
++ NI ++ +K+ D G + + +PE++ S
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 194
Query: 274 TDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPA--RELIGQL 331
+D+++ G++LY L++G P+ + + + + Y P + P + L+ +
Sbjct: 195 SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAEC 254
Query: 332 LNTHADKRPTAGQLL 346
L D+RP Q+L
Sbjct: 255 LKKKRDERPLFPQIL 269
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 18/255 (7%)
Query: 106 ERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTALALF 165
+R+G+G F TV K + G + L Q Q + E +L H +I LF
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI----LLF 69
Query: 166 ENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESY-ICCIIRQLHSALHCLHSQQIAHKD 224
IV Q G SL HL T E + I RQ + LH++ I H+D
Sbjct: 70 MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRD 129
Query: 225 IRPENILMN-GAVLKLIDLGXXXXXXX--------XXLPDLEFASPEMLTSPATAGPS-- 273
++ NI ++ +K+ D G + + +PE++ S
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 189
Query: 274 TDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPA--RELIGQL 331
+D+++ G++LY L++G P+ + + + + Y P + P + L+ +
Sbjct: 190 SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAEC 249
Query: 332 LNTHADKRPTAGQLL 346
L D+RP Q+L
Sbjct: 250 LKKKRDERPLFPQIL 264
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 101/258 (39%), Gaps = 14/258 (5%)
Query: 99 EHRYEELERLGNGRFCTVRKARDRGTGQLVALKQI----PRERQPQQITRAEYNLLSTLM 154
E + +L +G+G F V ARD ++VA+K++ + + Q E L L
Sbjct: 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 112
Query: 155 HAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHC 214
H P + T +VM+ G + + + E I + L
Sbjct: 113 H---PNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAY 169
Query: 215 LHSQQIAHKDIRPENILMNG-AVLKLIDLGXXXXX--XXXXLPDLEFASPEMLTS--PAT 269
LHS + H+D++ NIL++ ++KL D G + + +PE++ +
Sbjct: 170 LHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQ 229
Query: 270 AGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIG 329
D+WSLG+ L P + + HI A P Q GH S R +
Sbjct: 230 YDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI--AQNESPALQSGHWSEYFRNFVD 287
Query: 330 QLLNTHADKRPTAGQLLQ 347
L RPT+ LL+
Sbjct: 288 SCLQKIPQDRPTSEVLLK 305
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 18/255 (7%)
Query: 106 ERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTALALF 165
+R+G+G F TV K + G + L Q Q + E +L H +I LF
Sbjct: 34 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI----LLF 89
Query: 166 ENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESY-ICCIIRQLHSALHCLHSQQIAHKD 224
IV Q G SL HL T E + I RQ + LH++ I H+D
Sbjct: 90 MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRD 149
Query: 225 IRPENILMN-GAVLKLIDLGXXXXXXX--------XXLPDLEFASPEMLTSPATAGPS-- 273
++ NI ++ +K+ D G + + +PE++ S
Sbjct: 150 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 209
Query: 274 TDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPA--RELIGQL 331
+D+++ G++LY L++G P+ + + + + Y P + P + L+ +
Sbjct: 210 SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAEC 269
Query: 332 LNTHADKRPTAGQLL 346
L D+RP Q+L
Sbjct: 270 LKKKRDERPLFPQIL 284
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 81/208 (38%), Gaps = 23/208 (11%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALKQIPRER--QPQQITRAEYNLLSTLMHAHIPTALALF 165
LG G V + R + TG L A+K +P + E+ +L L H +I A+
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAI- 75
Query: 166 ENAPVPGTDTIVMQLVHGESLIQHLCRQST---ITESYICCIIRQLHSALHCLHSQQIAH 222
E ++M+ SL L S + ES ++R + ++ L I H
Sbjct: 76 EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVH 135
Query: 223 KDIRPENILM-----NGAVLKLIDLGXXXX-----XXXXXLPDLEFASPEMLTSPA---- 268
++I+P NI+ +V KL D G E+ P+M
Sbjct: 136 RNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDMYERAVLRKD 195
Query: 269 ---TAGPSTDMWSLGVLLYILLSGVSPF 293
G + D+WS+GV Y +G PF
Sbjct: 196 HQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 18/255 (7%)
Query: 106 ERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTALALF 165
+R+G+G F TV K + G + L Q Q + E +L H +I LF
Sbjct: 41 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI----LLF 96
Query: 166 ENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESY-ICCIIRQLHSALHCLHSQQIAHKD 224
IV Q G SL HL T E + I RQ + LH++ I H+D
Sbjct: 97 MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRD 156
Query: 225 IRPENILMN-GAVLKLIDLGXXXXXXX--------XXLPDLEFASPEMLTSPATAGPS-- 273
++ NI ++ +K+ D G + + +PE++ S
Sbjct: 157 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 216
Query: 274 TDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPA--RELIGQL 331
+D+++ G++LY L++G P+ + + + + Y P + P + L+ +
Sbjct: 217 SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAEC 276
Query: 332 LNTHADKRPTAGQLL 346
L D+RP Q+L
Sbjct: 277 LKKKRDERPLFPQIL 291
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 62/141 (43%), Gaps = 10/141 (7%)
Query: 161 ALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQI 220
LA PV T +V + V+ Q RQ T+T+ I + ++ AL HS I
Sbjct: 96 TLADIVKDPVSRTPALVFEHVNNTDFKQ--LRQ-TLTDYDIRFYMYEILKALDYCHSMGI 152
Query: 221 AHKDIRPENILMNGA--VLKLIDLGXXXXX-----XXXXLPDLEFASPEMLTSPATAGPS 273
H+D++P N++++ L+LID G + F PE+L S
Sbjct: 153 MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYS 212
Query: 274 TDMWSLGVLLYILLSGVSPFL 294
DMWSLG +L ++ PF
Sbjct: 213 LDMWSLGCMLASMIFRKEPFF 233
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 18/255 (7%)
Query: 106 ERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTALALF 165
+R+G+G F TV K + G + L Q Q + E +L H +I LF
Sbjct: 42 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI----LLF 97
Query: 166 ENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESY-ICCIIRQLHSALHCLHSQQIAHKD 224
IV Q G SL HL T E + I RQ + LH++ I H+D
Sbjct: 98 MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRD 157
Query: 225 IRPENILMN-GAVLKLIDLGXXXXXXX--------XXLPDLEFASPEMLTSPATAGPS-- 273
++ NI ++ +K+ D G + + +PE++ S
Sbjct: 158 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 217
Query: 274 TDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPA--RELIGQL 331
+D+++ G++LY L++G P+ + + + + Y P + P + L+ +
Sbjct: 218 SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAEC 277
Query: 332 LNTHADKRPTAGQLL 346
L D+RP Q+L
Sbjct: 278 LKKKRDERPLFPQIL 292
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 86/200 (43%), Gaps = 12/200 (6%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTA 161
Y+ + +LG G++ V +A + + VA+K + ++ + + +L L
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVAVKILKPVKKKKIKREIK--ILENLRGGPNIIT 96
Query: 162 LALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQIA 221
LA PV T +V + V+ Q T+T+ I + ++ AL HS I
Sbjct: 97 LADIVKDPVSRTPALVFEHVNNTDFKQ---LYQTLTDYDIRFYMYEILKALDYCHSMGIM 153
Query: 222 HKDIRPENILMNGA--VLKLIDLGXXXXX-----XXXXLPDLEFASPEMLTSPATAGPST 274
H+D++P N+L++ L+LID G + F PE+L S
Sbjct: 154 HRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSL 213
Query: 275 DMWSLGVLLYILLSGVSPFL 294
DMWSLG +L ++ PF
Sbjct: 214 DMWSLGCMLASMIFRKEPFF 233
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 103/255 (40%), Gaps = 18/255 (7%)
Query: 106 ERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTALALF 165
+R+G+G F TV K + G + L Q Q + E +L H +I LF
Sbjct: 42 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNI----LLF 97
Query: 166 ENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESY-ICCIIRQLHSALHCLHSQQIAHKD 224
IV Q G SL HL T E + I RQ + LH++ I H+D
Sbjct: 98 MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRD 157
Query: 225 IRPENILMN-GAVLKLIDLGXXXXXXX--------XXLPDLEFASPEMLTSPATAGPS-- 273
++ NI ++ +K+ D G + + +PE++ S
Sbjct: 158 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ 217
Query: 274 TDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPA--RELIGQL 331
+D+++ G++LY L++G P+ + + + + Y P + P + L+ +
Sbjct: 218 SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAEC 277
Query: 332 LNTHADKRPTAGQLL 346
L D+RP Q+L
Sbjct: 278 LKKKRDERPLFPQIL 292
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 111/272 (40%), Gaps = 24/272 (8%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAHI 158
+E++ LG G V K + +G ++A K I E +P QI R L L +
Sbjct: 11 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRE----LQVLHECNS 66
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCI-IRQLHSALHCLHS 217
P + + G +I M+ + G SL Q L + I E + + I + +
Sbjct: 67 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 126
Query: 218 QQIAHKDIRPENILMNG-AVLKLIDLGXXXXXXXXXLPDL----EFASPEMLTSPATAGP 272
+I H+D++P NIL+N +KL D G + + SPE L +
Sbjct: 127 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFVGTRSYMSPERLQGTHYS-V 185
Query: 273 STDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADY--SFPPEQ--CGHISVPARELI 328
+D+WS+G+ L + G P A + DY + PP + S+ ++ +
Sbjct: 186 QSDIWSMGLSLVEMAVGRYP------RPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFV 239
Query: 329 GQLLNTHADKRPTAGQLLQVAWFAEASCSEFD 360
+ L + +R QL+ A+ + E D
Sbjct: 240 NKCLIKNPAERADLKQLMVHAFIKRSDAEEVD 271
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 16/208 (7%)
Query: 98 FEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQ---PQQITRAEYNLLSTLM 154
F ++ ++ LG G + V+ A +R T + VA+K + +R P+ I + E + L
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-EIXINKMLN 62
Query: 155 HAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHC 214
H ++ + + + + ++ G L + + E QL + +
Sbjct: 63 HENV---VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 215 LHSQQIAHKDIRPENILMNGA-VLKLIDLGXXXXXX--------XXXLPDLEFASPEMLT 265
LH I H+DI+PEN+L++ LK+ D G L + +PE+L
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 266 SPATAGPSTDMWSLGVLLYILLSGVSPF 293
D+WS G++L +L+G P+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 7/107 (6%)
Query: 195 TITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILMNGAV--LKLIDLGXXX-----X 247
T+T+ I I +L AL HSQ I H+D++P N++++ + L+LID G
Sbjct: 121 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 180
Query: 248 XXXXXLPDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFL 294
+ F PE+L S DMWSLG + ++ PF
Sbjct: 181 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 227
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 7/107 (6%)
Query: 195 TITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILMNGAV--LKLIDLGXXX-----X 247
T+T+ I I +L AL HSQ I H+D++P N++++ + L+LID G
Sbjct: 123 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 182
Query: 248 XXXXXLPDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFL 294
+ F PE+L S DMWSLG + ++ PF
Sbjct: 183 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 229
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 7/107 (6%)
Query: 195 TITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILMNGAV--LKLIDLGXXX-----X 247
T+T+ I I +L AL HSQ I H+D++P N++++ + L+LID G
Sbjct: 122 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 181
Query: 248 XXXXXLPDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFL 294
+ F PE+L S DMWSLG + ++ PF
Sbjct: 182 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 228
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 99/247 (40%), Gaps = 48/247 (19%)
Query: 96 EQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMH 155
E +Y + LG G F V + D +G+ ALK++ ++ P+ R E +++ L H
Sbjct: 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQD--PRYKNR-ELDIMKVLDH 59
Query: 156 AHIPTALALFENA-------PVPGTD----------------------------TIVMQL 180
+I + F P P D ++M+
Sbjct: 60 VNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEY 119
Query: 181 VHG--ESLIQHLCRQS-TITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILMNGA-- 235
V +++ R +I + I I QL A+ +HS I H+DI+P+N+L+N
Sbjct: 120 VPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDN 179
Query: 236 VLKLIDLGXXXXX-----XXXXLPDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLSGV 290
LKL D G + + +PE++ PS D+WS+G + L+ G
Sbjct: 180 TLKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGK 239
Query: 291 SPFLDES 297
F E+
Sbjct: 240 PLFSGET 246
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 7/107 (6%)
Query: 195 TITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILMNGAV--LKLIDLGXXX-----X 247
T+T+ I I +L AL HSQ I H+D++P N++++ + L+LID G
Sbjct: 122 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 181
Query: 248 XXXXXLPDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFL 294
+ F PE+L S DMWSLG + ++ PF
Sbjct: 182 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 228
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 16/208 (7%)
Query: 98 FEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQ---PQQITRAEYNLLSTLM 154
F ++ ++ LG G + V+ A +R T + VA+K + +R P+ I + E + L
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-EIXINKMLN 62
Query: 155 HAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHC 214
H ++ + + + + ++ G L + + E QL + +
Sbjct: 63 HENV---VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 215 LHSQQIAHKDIRPENILMNGA-VLKLIDLGXXXXXX--------XXXLPDLEFASPEMLT 265
LH I H+DI+PEN+L++ LK+ D G L + +PE+L
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 266 SPATAGPSTDMWSLGVLLYILLSGVSPF 293
D+WS G++L +L+G P+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 16/208 (7%)
Query: 98 FEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQ---PQQITRAEYNLLSTLM 154
F ++ ++ LG G + V+ A +R T + VA+K + +R P+ I + E + L
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-EIXINKMLN 63
Query: 155 HAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHC 214
H ++ + + + + ++ G L + + E QL + +
Sbjct: 64 HENV---VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 215 LHSQQIAHKDIRPENILMNGA-VLKLIDLGXXXXXX--------XXXLPDLEFASPEMLT 265
LH I H+DI+PEN+L++ LK+ D G L + +PE+L
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 180
Query: 266 SPATAGPSTDMWSLGVLLYILLSGVSPF 293
D+WS G++L +L+G P+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 7/107 (6%)
Query: 195 TITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILMNGAV--LKLIDLGXXX-----X 247
T+T+ I I +L AL HSQ I H+D++P N++++ + L+LID G
Sbjct: 121 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 180
Query: 248 XXXXXLPDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFL 294
+ F PE+L S DMWSLG + ++ PF
Sbjct: 181 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 227
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 7/107 (6%)
Query: 195 TITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILMNGAV--LKLIDLGXXX-----X 247
T+T+ I I +L AL HSQ I H+D++P N++++ + L+LID G
Sbjct: 121 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 180
Query: 248 XXXXXLPDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFL 294
+ F PE+L S DMWSLG + ++ PF
Sbjct: 181 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 227
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 7/107 (6%)
Query: 195 TITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILMNGAV--LKLIDLGXXX-----X 247
T+T+ I I +L AL HSQ I H+D++P N++++ + L+LID G
Sbjct: 121 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 180
Query: 248 XXXXXLPDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFL 294
+ F PE+L S DMWSLG + ++ PF
Sbjct: 181 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 227
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 7/107 (6%)
Query: 195 TITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILMNGAV--LKLIDLGXXX-----X 247
T+T+ I I +L AL HSQ I H+D++P N++++ + L+LID G
Sbjct: 121 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 180
Query: 248 XXXXXLPDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFL 294
+ F PE+L S DMWSLG + ++ PF
Sbjct: 181 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 227
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 7/107 (6%)
Query: 195 TITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILMNGAV--LKLIDLGXXX-----X 247
T+T+ I I +L AL HSQ I H+D++P N++++ + L+LID G
Sbjct: 121 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 180
Query: 248 XXXXXLPDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFL 294
+ F PE+L S DMWSLG + ++ PF
Sbjct: 181 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 227
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 7/107 (6%)
Query: 195 TITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILMNGAV--LKLIDLGXXX-----X 247
T+T+ I I +L AL HSQ I H+D++P N++++ + L+LID G
Sbjct: 142 TLTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK 201
Query: 248 XXXXXLPDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFL 294
+ F PE+L S DMWSLG + ++ PF
Sbjct: 202 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFF 248
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 127/299 (42%), Gaps = 58/299 (19%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYN---LLSTLMHAH 157
RY+ L+ +G+G V A D + VA+K++ R Q Q + Y L+ + H +
Sbjct: 25 RYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKN 84
Query: 158 IPTALALFENAPVPGTDT-----IVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSAL 212
I L +F P + IVM+L+ +L Q + Q + + ++ Q+ +
Sbjct: 85 IIGLLNVF--TPQKSLEEFQDVYIVMELMDA-NLSQVI--QMELDHERMSYLLYQMLVGI 139
Query: 213 HCLHSQQIAHKDIRPENILMNG-AVLKLIDLGXXXXXXXXXL--PDL---EFASPEMLTS 266
LHS I H+D++P NI++ A LK++D G + P + + +PE++
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 267 PATAGPSTDMWSLGVLLYILLSGV----------------------SP-FLDESEEETRA 303
+ D+WS+GV++ ++ G SP F+ + + R
Sbjct: 200 MGYK-ENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRT 258
Query: 304 HI----SVADYSFP--------PEQCGHISVP---ARELIGQLLNTHADKRPTAGQLLQ 347
++ A YSF P H + AR+L+ ++L A KR + + LQ
Sbjct: 259 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 90/208 (43%), Gaps = 16/208 (7%)
Query: 98 FEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQ---PQQITRAEYNLLSTLM 154
F ++ ++ LG G + V+ A +R T + VA+K + +R P+ I + E + + L
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-EICINAMLN 63
Query: 155 HAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHC 214
H ++ + + + + ++ G L + + E QL + +
Sbjct: 64 HENV---VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 215 LHSQQIAHKDIRPENILMNGA-VLKLIDLGXXXXXX--------XXXLPDLEFASPEMLT 265
LH I H+DI+PEN+L++ LK+ D G L + +PE+L
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 266 SPATAGPSTDMWSLGVLLYILLSGVSPF 293
D+WS G++L +L+G P+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 16/208 (7%)
Query: 98 FEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQ---PQQITRAEYNLLSTLM 154
F ++ ++ LG G + V+ A +R T + VA+K + +R P+ I + E + L
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-EICINKMLN 63
Query: 155 HAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHC 214
H ++ + + + + ++ G L + + E QL + +
Sbjct: 64 HENV---VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 215 LHSQQIAHKDIRPENILMNGA-VLKLIDLGXXXXXX--------XXXLPDLEFASPEMLT 265
LH I H+DI+PEN+L++ LK+ D G L + +PE+L
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 266 SPATAGPSTDMWSLGVLLYILLSGVSPF 293
D+WS G++L +L+G P+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 16/208 (7%)
Query: 98 FEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQ---PQQITRAEYNLLSTLM 154
F ++ ++ LG G + V+ A +R T + VA+K + +R P+ I + E + L
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-EICINKMLN 62
Query: 155 HAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHC 214
H ++ + + + + ++ G L + + E QL + +
Sbjct: 63 HENV---VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 215 LHSQQIAHKDIRPENILMNGA-VLKLIDLGXXXXXX--------XXXLPDLEFASPEMLT 265
LH I H+DI+PEN+L++ LK+ D G L + +PE+L
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 266 SPATAGPSTDMWSLGVLLYILLSGVSPF 293
D+WS G++L +L+G P+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 16/208 (7%)
Query: 98 FEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQ---PQQITRAEYNLLSTLM 154
F ++ ++ LG G + V+ A +R T + VA+K + +R P+ I + E + L
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-EICINKMLN 62
Query: 155 HAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHC 214
H ++ + + + + ++ G L + + E QL + +
Sbjct: 63 HENV---VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 215 LHSQQIAHKDIRPENILMNGA-VLKLIDLGXXXXXX--------XXXLPDLEFASPEMLT 265
LH I H+DI+PEN+L++ LK+ D G L + +PE+L
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 266 SPATAGPSTDMWSLGVLLYILLSGVSPF 293
D+WS G++L +L+G P+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 84/201 (41%), Gaps = 14/201 (6%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAHI 158
+E++ LG G V K + +G ++A K I E +P QI R L L +
Sbjct: 35 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRE----LQVLHECNS 90
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCI-IRQLHSALHCLHS 217
P + + G +I M+ + G SL Q L + I E + + I + +
Sbjct: 91 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 150
Query: 218 QQIAHKDIRPENILMNG-AVLKLIDLGXXXXXXXXXLPDL----EFASPEMLTSPATAGP 272
+I H+D++P NIL+N +KL D G + SPE L +
Sbjct: 151 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYS-V 209
Query: 273 STDMWSLGVLLYILLSGVSPF 293
+D+WS+G+ L + G P
Sbjct: 210 QSDIWSMGLSLVEMAVGRYPI 230
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 84/201 (41%), Gaps = 14/201 (6%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAHI 158
+E++ LG G V K + +G ++A K I E +P QI R L L +
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRE----LQVLHECNS 63
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCI-IRQLHSALHCLHS 217
P + + G +I M+ + G SL Q L + I E + + I + +
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 218 QQIAHKDIRPENILMNG-AVLKLIDLGXXXXXXXXXLPDL----EFASPEMLTSPATAGP 272
+I H+D++P NIL+N +KL D G + SPE L +
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYS-V 182
Query: 273 STDMWSLGVLLYILLSGVSPF 293
+D+WS+G+ L + G P
Sbjct: 183 QSDIWSMGLSLVEMAVGRYPI 203
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 84/201 (41%), Gaps = 14/201 (6%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAHI 158
+E++ LG G V K + +G ++A K I E +P QI R L L +
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRE----LQVLHECNS 63
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCI-IRQLHSALHCLHS 217
P + + G +I M+ + G SL Q L + I E + + I + +
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 218 QQIAHKDIRPENILMNG-AVLKLIDLGXXXXXXXXXLPDL----EFASPEMLTSPATAGP 272
+I H+D++P NIL+N +KL D G + SPE L +
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYS-V 182
Query: 273 STDMWSLGVLLYILLSGVSPF 293
+D+WS+G+ L + G P
Sbjct: 183 QSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 84/201 (41%), Gaps = 14/201 (6%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAHI 158
+E++ LG G V K + +G ++A K I E +P QI R L L +
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRE----LQVLHECNS 63
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCI-IRQLHSALHCLHS 217
P + + G +I M+ + G SL Q L + I E + + I + +
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 218 QQIAHKDIRPENILMNG-AVLKLIDLGXXXXXXXXXLPDL----EFASPEMLTSPATAGP 272
+I H+D++P NIL+N +KL D G + SPE L +
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYS-V 182
Query: 273 STDMWSLGVLLYILLSGVSPF 293
+D+WS+G+ L + G P
Sbjct: 183 QSDIWSMGLSLVEMAVGRYPI 203
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 16/208 (7%)
Query: 98 FEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQ---PQQITRAEYNLLSTLM 154
F ++ ++ LG G + V+ A +R T + VA+K + +R P+ I + E + L
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-EICINKMLN 62
Query: 155 HAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHC 214
H ++ + + + + ++ G L + + E QL + +
Sbjct: 63 HENV---VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 215 LHSQQIAHKDIRPENILMNGA-VLKLIDLGXXXXXX--------XXXLPDLEFASPEMLT 265
LH I H+DI+PEN+L++ LK+ D G L + +PE+L
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 266 SPATAGPSTDMWSLGVLLYILLSGVSPF 293
D+WS G++L +L+G P+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 16/208 (7%)
Query: 98 FEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQ---PQQITRAEYNLLSTLM 154
F ++ ++ LG G + V+ A +R T + VA+K + +R P+ I + E + L
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-EICINKMLN 62
Query: 155 HAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHC 214
H ++ + + + + ++ G L + + E QL + +
Sbjct: 63 HENV---VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 215 LHSQQIAHKDIRPENILMNGA-VLKLIDLGXXXXXX--------XXXLPDLEFASPEMLT 265
LH I H+DI+PEN+L++ LK+ D G L + +PE+L
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 266 SPATAGPSTDMWSLGVLLYILLSGVSPF 293
D+WS G++L +L+G P+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 60/141 (42%), Gaps = 10/141 (7%)
Query: 161 ALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQI 220
LA PV T +V + V+ Q T+T+ I + ++ AL HS I
Sbjct: 95 TLADIVKDPVSRTPALVFEHVNNTDFKQ---LYQTLTDYDIRFYMYEILKALDYCHSMGI 151
Query: 221 AHKDIRPENILMNGA--VLKLIDLGXXXXX-----XXXXLPDLEFASPEMLTSPATAGPS 273
H+D++P N++++ L+LID G + F PE+L S
Sbjct: 152 MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYS 211
Query: 274 TDMWSLGVLLYILLSGVSPFL 294
DMWSLG +L ++ PF
Sbjct: 212 LDMWSLGCMLASMIFRKEPFF 232
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 16/208 (7%)
Query: 98 FEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQ---PQQITRAEYNLLSTLM 154
F ++ ++ LG G + V+ A +R T + VA+K + +R P+ I + E + L
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-EICINKMLN 62
Query: 155 HAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHC 214
H ++ + + + + ++ G L + + E QL + +
Sbjct: 63 HENV---VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 215 LHSQQIAHKDIRPENILMNGA-VLKLIDLGXXXXXX--------XXXLPDLEFASPEMLT 265
LH I H+DI+PEN+L++ LK+ D G L + +PE+L
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 266 SPATAGPSTDMWSLGVLLYILLSGVSPF 293
D+WS G++L +L+G P+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 84/201 (41%), Gaps = 14/201 (6%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQITRAEYNLLSTLMHAHI 158
+E++ LG G V K + +G ++A K I E +P QI R L L +
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRE----LQVLHECNS 63
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCI-IRQLHSALHCLHS 217
P + + G +I M+ + G SL Q L + I E + + I + +
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 218 QQIAHKDIRPENILMNG-AVLKLIDLGXXXXXXXXXLPDL----EFASPEMLTSPATAGP 272
+I H+D++P NIL+N +KL D G + SPE L +
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYS-V 182
Query: 273 STDMWSLGVLLYILLSGVSPF 293
+D+WS+G+ L + G P
Sbjct: 183 QSDIWSMGLSLVEMAVGRYPI 203
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 16/208 (7%)
Query: 98 FEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQ---PQQITRAEYNLLSTLM 154
F ++ ++ LG G + V+ A +R T + VA+K + +R P+ I + E + L
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-EICINKMLN 62
Query: 155 HAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHC 214
H ++ + + + + ++ G L + + E QL + +
Sbjct: 63 HENV---VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 215 LHSQQIAHKDIRPENILMNGA-VLKLIDLGXXXXXX--------XXXLPDLEFASPEMLT 265
LH I H+DI+PEN+L++ LK+ D G L + +PE+L
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 266 SPATAGPSTDMWSLGVLLYILLSGVSPF 293
D+WS G++L +L+G P+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 60/141 (42%), Gaps = 10/141 (7%)
Query: 161 ALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQI 220
LA PV T +V + V+ Q T+T+ I + ++ AL HS I
Sbjct: 96 TLADIVKDPVSRTPALVFEHVNNTDFKQ---LYQTLTDYDIRFYMYEILKALDYCHSMGI 152
Query: 221 AHKDIRPENILMNGA--VLKLIDLGXXXXX-----XXXXLPDLEFASPEMLTSPATAGPS 273
H+D++P N++++ L+LID G + F PE+L S
Sbjct: 153 MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYS 212
Query: 274 TDMWSLGVLLYILLSGVSPFL 294
DMWSLG +L ++ PF
Sbjct: 213 LDMWSLGCMLASMIFRKEPFF 233
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 16/208 (7%)
Query: 98 FEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQ---PQQITRAEYNLLSTLM 154
F ++ ++ LG G + V+ A +R T + VA+K + +R P+ I + E + L
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-EICINKMLN 62
Query: 155 HAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHC 214
H ++ + + + + ++ G L + + E QL + +
Sbjct: 63 HENV---VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 215 LHSQQIAHKDIRPENILMNGA-VLKLIDLGXXXXXX--------XXXLPDLEFASPEMLT 265
LH I H+DI+PEN+L++ LK+ D G L + +PE+L
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 266 SPATAGPSTDMWSLGVLLYILLSGVSPF 293
D+WS G++L +L+G P+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 111/253 (43%), Gaps = 22/253 (8%)
Query: 111 GRFCTVRKARDRGTGQLVALKQIPRERQPQ-QITRAEYNLLSTLMHAHIPTALALFENAP 169
G F V KA+++ T L A K I + + + + E ++L++ H P + L +
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDH---PNIVKLLDAFY 77
Query: 170 VPGTDTIVMQLVHGESLIQHLCR-QSTITESYICCIIRQLHSALHCLHSQQIAHKDIRPE 228
I+++ G ++ + + +TES I + +Q AL+ LH +I H+D++
Sbjct: 78 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAG 137
Query: 229 NILMN-GAVLKLIDLGXXXXXXXXXLPDLE-------FASPEMLTSPATAGP----STDM 276
NIL +KL D G + + + +PE++ + D+
Sbjct: 138 NILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADV 197
Query: 277 WSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPP--EQCGHISVPARELIGQLLNT 334
WSLG+ L I ++ + P E R + +A S PP Q S ++ + + L
Sbjct: 198 WSLGITL-IEMAEIEPPHHEL-NPMRVLLKIAK-SEPPTLAQPSRWSSNFKDFLKKCLEK 254
Query: 335 HADKRPTAGQLLQ 347
+ D R T QLLQ
Sbjct: 255 NVDARWTTSQLLQ 267
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 92/216 (42%), Gaps = 16/216 (7%)
Query: 89 FETRWQQ--EQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP---QQIT 143
F T+ Q+ E + +E++ LG G V K + +G ++A K I E +P QI
Sbjct: 55 FLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII 114
Query: 144 RAEYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICC 203
R L L + P + + G +I M+ + G SL Q L + I E +
Sbjct: 115 RE----LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGK 170
Query: 204 I-IRQLHSALHCLHSQQIAHKDIRPENILMNG-AVLKLIDLGXXX----XXXXXXLPDLE 257
+ I + + +I H+D++P NIL+N +KL D G +
Sbjct: 171 VSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRS 230
Query: 258 FASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPF 293
+ SPE L + +D+WS+G+ L + G P
Sbjct: 231 YMSPERLQGTHYS-VQSDIWSMGLSLVEMAVGRYPI 265
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 16/208 (7%)
Query: 98 FEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQ---PQQITRAEYNLLSTLM 154
F ++ ++ LG G + V+ A +R T + VA+K + +R P+ I + E + L
Sbjct: 3 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-EICINKMLN 61
Query: 155 HAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHC 214
H ++ + + + + ++ G L + + E QL + +
Sbjct: 62 HENV---VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 118
Query: 215 LHSQQIAHKDIRPENILMNGA-VLKLIDLGXXXXXX--------XXXLPDLEFASPEMLT 265
LH I H+DI+PEN+L++ LK+ D G L + +PE+L
Sbjct: 119 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 178
Query: 266 SPATAGPSTDMWSLGVLLYILLSGVSPF 293
D+WS G++L +L+G P+
Sbjct: 179 RREFHAEPVDVWSCGIVLTAMLAGELPW 206
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 16/208 (7%)
Query: 98 FEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQ---PQQITRAEYNLLSTLM 154
F ++ ++ LG G + V+ A +R T + VA+K + +R P+ I + E + L
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-EICINKMLN 62
Query: 155 HAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHC 214
H ++ + + + + ++ G L + + E QL + +
Sbjct: 63 HENV---VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 215 LHSQQIAHKDIRPENILMNGA-VLKLIDLGXXXXXX--------XXXLPDLEFASPEMLT 265
LH I H+DI+PEN+L++ LK+ D G L + +PE+L
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 266 SPATAGPSTDMWSLGVLLYILLSGVSPF 293
D+WS G++L +L+G P+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 60/141 (42%), Gaps = 10/141 (7%)
Query: 161 ALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQI 220
LA PV T +V + V+ Q T+T+ I + ++ AL HS I
Sbjct: 95 TLADIVKDPVSRTPALVFEHVNNTDFKQ---LYQTLTDYDIRFYMYEILKALDYCHSMGI 151
Query: 221 AHKDIRPENILMNGA--VLKLIDLGXXXXX-----XXXXLPDLEFASPEMLTSPATAGPS 273
H+D++P N++++ L+LID G + F PE+L S
Sbjct: 152 MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYS 211
Query: 274 TDMWSLGVLLYILLSGVSPFL 294
DMWSLG +L ++ PF
Sbjct: 212 LDMWSLGCMLASMIFRKEPFF 232
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 16/208 (7%)
Query: 98 FEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQ---PQQITRAEYNLLSTLM 154
F ++ ++ LG G + V+ A +R T + VA+K + +R P+ I + E + L
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-EICINKMLN 62
Query: 155 HAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHC 214
H ++ + + + + ++ G L + + E QL + +
Sbjct: 63 HENV---VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 215 LHSQQIAHKDIRPENILMNGA-VLKLIDLGXXXXXX--------XXXLPDLEFASPEMLT 265
LH I H+DI+PEN+L++ LK+ D G L + +PE+L
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 266 SPATAGPSTDMWSLGVLLYILLSGVSPF 293
D+WS G++L +L+G P+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 60/141 (42%), Gaps = 10/141 (7%)
Query: 161 ALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQI 220
LA PV T +V + V+ Q T+T+ I + ++ AL HS I
Sbjct: 94 TLADIVKDPVSRTPALVFEHVNNTDFKQ---LYQTLTDYDIRFYMYEILKALDYCHSMGI 150
Query: 221 AHKDIRPENILMNGA--VLKLIDLGXXXXX-----XXXXLPDLEFASPEMLTSPATAGPS 273
H+D++P N++++ L+LID G + F PE+L S
Sbjct: 151 MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYS 210
Query: 274 TDMWSLGVLLYILLSGVSPFL 294
DMWSLG +L ++ PF
Sbjct: 211 LDMWSLGCMLASMIFRKEPFF 231
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 16/208 (7%)
Query: 98 FEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQ---PQQITRAEYNLLSTLM 154
F ++ ++ LG G + V+ A +R T + VA+K + +R P+ I + E + L
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-EICINKMLN 63
Query: 155 HAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHC 214
H ++ + + + + ++ G L + + E QL + +
Sbjct: 64 HENV---VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 215 LHSQQIAHKDIRPENILMNGA-VLKLIDLGXXXXXX--------XXXLPDLEFASPEMLT 265
LH I H+DI+PEN+L++ LK+ D G L + +PE+L
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 266 SPATAGPSTDMWSLGVLLYILLSGVSPF 293
D+WS G++L +L+G P+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 60/141 (42%), Gaps = 10/141 (7%)
Query: 161 ALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQI 220
LA PV T +V + V+ Q T+T+ I + ++ AL HS I
Sbjct: 96 TLADIVKDPVSRTPALVFEHVNNTDFKQ---LYQTLTDYDIRFYMYEILKALDYCHSMGI 152
Query: 221 AHKDIRPENILMNGA--VLKLIDLGXXXXX-----XXXXLPDLEFASPEMLTSPATAGPS 273
H+D++P N++++ L+LID G + F PE+L S
Sbjct: 153 MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYS 212
Query: 274 TDMWSLGVLLYILLSGVSPFL 294
DMWSLG +L ++ PF
Sbjct: 213 LDMWSLGCMLASMIFRKEPFF 233
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 16/208 (7%)
Query: 98 FEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQ---PQQITRAEYNLLSTLM 154
F ++ ++ LG G + V+ A +R T + VA+K + +R P+ I + E + L
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-EICINKMLN 63
Query: 155 HAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHC 214
H ++ + + + + ++ G L + + E QL + +
Sbjct: 64 HENV---VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 215 LHSQQIAHKDIRPENILMNGA-VLKLIDLGXXXXXX--------XXXLPDLEFASPEMLT 265
LH I H+DI+PEN+L++ LK+ D G L + +PE+L
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 266 SPATAGPSTDMWSLGVLLYILLSGVSPF 293
D+WS G++L +L+G P+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 60/141 (42%), Gaps = 10/141 (7%)
Query: 161 ALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQI 220
LA PV T +V + V+ Q T+T+ I + ++ AL HS I
Sbjct: 96 TLADIVKDPVSRTPALVFEHVNNTDFKQ---LYQTLTDYDIRFYMYEILKALDYCHSMGI 152
Query: 221 AHKDIRPENILMNGA--VLKLIDLGXXXXX-----XXXXLPDLEFASPEMLTSPATAGPS 273
H+D++P N++++ L+LID G + F PE+L S
Sbjct: 153 MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYS 212
Query: 274 TDMWSLGVLLYILLSGVSPFL 294
DMWSLG +L ++ PF
Sbjct: 213 LDMWSLGCMLASMIFRKEPFF 233
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 16/208 (7%)
Query: 98 FEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQ---PQQITRAEYNLLSTLM 154
F ++ ++ LG G + V+ A +R T + VA+K + +R P+ I + E + L
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-EICINKMLN 63
Query: 155 HAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHC 214
H ++ + + + + ++ G L + + E QL + +
Sbjct: 64 HENV---VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 215 LHSQQIAHKDIRPENILMNGA-VLKLIDLGXXXXXX--------XXXLPDLEFASPEMLT 265
LH I H+DI+PEN+L++ LK+ D G L + +PE+L
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 266 SPATAGPSTDMWSLGVLLYILLSGVSPF 293
D+WS G++L +L+G P+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 16/208 (7%)
Query: 98 FEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQ---PQQITRAEYNLLSTLM 154
F ++ ++ LG G + V+ A +R T + VA+K + +R P+ I + E + L
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-EICINKMLN 63
Query: 155 HAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHC 214
H ++ + + + + ++ G L + + E QL + +
Sbjct: 64 HENV---VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 215 LHSQQIAHKDIRPENILMNGA-VLKLIDLGXXXXXX--------XXXLPDLEFASPEMLT 265
LH I H+DI+PEN+L++ LK+ D G L + +PE+L
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 266 SPATAGPSTDMWSLGVLLYILLSGVSPF 293
D+WS G++L +L+G P+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 89/208 (42%), Gaps = 16/208 (7%)
Query: 98 FEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQ---PQQITRAEYNLLSTLM 154
F ++ ++ LG G + V+ A +R T + VA+K + +R P+ I + E + L
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-EICINKMLN 63
Query: 155 HAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHC 214
H ++ + + + + ++ G L + + E QL + +
Sbjct: 64 HENV---VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 120
Query: 215 LHSQQIAHKDIRPENILMNGA-VLKLIDLGXXXXXX--------XXXLPDLEFASPEMLT 265
LH I H+DI+PEN+L++ LK+ D G L + +PE+L
Sbjct: 121 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 266 SPATAGPSTDMWSLGVLLYILLSGVSPF 293
D+WS G++L +L+G P+
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELPW 208
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 60/141 (42%), Gaps = 10/141 (7%)
Query: 161 ALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQI 220
LA PV T +V + V+ Q T+T+ I + ++ AL HS I
Sbjct: 96 TLADIVKDPVSRTPALVFEHVNNTDFKQ---LYQTLTDYDIRFYMYEILKALDYCHSMGI 152
Query: 221 AHKDIRPENILMNGA--VLKLIDLGXXXXX-----XXXXLPDLEFASPEMLTSPATAGPS 273
H+D++P N++++ L+LID G + F PE+L S
Sbjct: 153 MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYS 212
Query: 274 TDMWSLGVLLYILLSGVSPFL 294
DMWSLG +L ++ PF
Sbjct: 213 LDMWSLGCMLASMIFRKEPFF 233
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 60/141 (42%), Gaps = 10/141 (7%)
Query: 161 ALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQI 220
LA PV T +V + V+ Q T+T+ I + ++ AL HS I
Sbjct: 96 TLADIVKDPVSRTPALVFEHVNNTDFKQ---LYQTLTDYDIRFYMYEILKALDYCHSMGI 152
Query: 221 AHKDIRPENILMNGA--VLKLIDLGXXXXX-----XXXXLPDLEFASPEMLTSPATAGPS 273
H+D++P N++++ L+LID G + F PE+L S
Sbjct: 153 MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYS 212
Query: 274 TDMWSLGVLLYILLSGVSPFL 294
DMWSLG +L ++ PF
Sbjct: 213 LDMWSLGCMLASMIFRKEPFF 233
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 60/141 (42%), Gaps = 10/141 (7%)
Query: 161 ALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQI 220
LA PV T +V + V+ Q T+T+ I + ++ AL HS I
Sbjct: 96 TLADIVKDPVSRTPALVFEHVNNTDFKQ---LYQTLTDYDIRFYMYEILKALDYCHSMGI 152
Query: 221 AHKDIRPENILMNGA--VLKLIDLGXXXXX-----XXXXLPDLEFASPEMLTSPATAGPS 273
H+D++P N++++ L+LID G + F PE+L S
Sbjct: 153 MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYS 212
Query: 274 TDMWSLGVLLYILLSGVSPFL 294
DMWSLG +L ++ PF
Sbjct: 213 LDMWSLGCMLASMIFRKEPFF 233
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 60/141 (42%), Gaps = 10/141 (7%)
Query: 161 ALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQI 220
LA PV T +V + V+ Q T+T+ I + ++ AL HS I
Sbjct: 96 TLADIVKDPVSRTPALVFEHVNNTDFKQ---LYQTLTDYDIRFYMYEILKALDYCHSMGI 152
Query: 221 AHKDIRPENILMNGA--VLKLIDLGXXXXX-----XXXXLPDLEFASPEMLTSPATAGPS 273
H+D++P N++++ L+LID G + F PE+L S
Sbjct: 153 MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYS 212
Query: 274 TDMWSLGVLLYILLSGVSPFL 294
DMWSLG +L ++ PF
Sbjct: 213 LDMWSLGCMLASMIFRKEPFF 233
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 10/133 (7%)
Query: 169 PVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQIAHKDIRPE 228
PV T +V + ++ Q +T+ I + +L AL HS+ I H+D++P
Sbjct: 105 PVSKTPALVFEYINNTDFKQ---LYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPH 161
Query: 229 NILMN--GAVLKLIDLGXX-----XXXXXXXLPDLEFASPEMLTSPATAGPSTDMWSLGV 281
N++++ L+LID G + F PE+L S DMWSLG
Sbjct: 162 NVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGC 221
Query: 282 LLYILLSGVSPFL 294
+L ++ PF
Sbjct: 222 MLASMIFRREPFF 234
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 73/185 (39%), Gaps = 22/185 (11%)
Query: 169 PVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQIAHKDIRPE 228
PV T +V + ++ Q +T+ I + +L AL HS+ I H+D++P
Sbjct: 110 PVSKTPALVFEYINNTDFKQ---LYQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPH 166
Query: 229 NILMN--GAVLKLIDLGXX-----XXXXXXXLPDLEFASPEMLTSPATAGPSTDMWSLGV 281
N++++ L+LID G + F PE+L S DMWSLG
Sbjct: 167 NVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGC 226
Query: 282 LLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPT 341
+L ++ PF ++ + +A + EL G L H D P
Sbjct: 227 MLASMIFRREPFF-HGQDNYDQLVRIAK-----------VLGTEELYGYLKKYHIDLDPH 274
Query: 342 AGQLL 346
+L
Sbjct: 275 FNDIL 279
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 127/299 (42%), Gaps = 58/299 (19%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYN---LLSTLMHAH 157
RY+ L+ +G+G V A D + VA+K++ R Q Q + Y L+ + H +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKN 84
Query: 158 IPTALALFENAPVPGTDT-----IVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSAL 212
I L +F P + IVM+L+ +L Q + Q + + ++ Q+ +
Sbjct: 85 IIGLLNVF--TPQKSLEEFQDVYIVMELMDA-NLSQVI--QMELDHERMSYLLYQMLVGI 139
Query: 213 HCLHSQQIAHKDIRPENILMNG-AVLKLIDLGXXXXXXXXXL--PDL---EFASPEMLTS 266
LHS I H+D++P NI++ A LK++D G + P + + +PE++
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 267 PATAGPSTDMWSLGVLLYILLSGV----------------------SP-FLDESEEETRA 303
+ D+WS+GV++ ++ G SP F+ + + R
Sbjct: 200 MGYK-ENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRT 258
Query: 304 HI----SVADYSFP--------PEQCGHISVP---ARELIGQLLNTHADKRPTAGQLLQ 347
++ A YSF P H + AR+L+ ++L A KR + + LQ
Sbjct: 259 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 60/141 (42%), Gaps = 10/141 (7%)
Query: 161 ALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQI 220
LA PV T +V + V+ Q T+T+ I + ++ AL HS I
Sbjct: 96 TLADIVKDPVSRTPALVFEHVNNTDFKQ---LYQTLTDYDIRFYMYEILKALDYCHSMGI 152
Query: 221 AHKDIRPENILMNGA--VLKLIDLGXXXXX-----XXXXLPDLEFASPEMLTSPATAGPS 273
H+D++P N++++ L+LID G + F PE+L S
Sbjct: 153 MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYS 212
Query: 274 TDMWSLGVLLYILLSGVSPFL 294
DMWSLG +L ++ PF
Sbjct: 213 LDMWSLGCMLASMIFRKEPFF 233
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 113/261 (43%), Gaps = 24/261 (9%)
Query: 102 YEELER---LGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHI 158
Y+E+E +G G F V KA+ R VA+KQI E + + E LS + H +I
Sbjct: 7 YKEIEVEEVVGRGAFGVVCKAKWRAKD--VAIKQIESESERKAFI-VELRQLSRVNHPNI 63
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLI------QHLCRQSTITESYICCIIRQLHSAL 212
N PV +VM+ G SL + L + C Q + L
Sbjct: 64 VKLYGACLN-PV----CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYL 118
Query: 213 HCLHSQQIAHKDIRPENILM--NGAVLKLIDLGXXXXXXXXXLPD---LEFASPEMLTSP 267
H + + + H+D++P N+L+ G VLK+ D G + + +PE+
Sbjct: 119 HSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEG- 177
Query: 268 ATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAREL 327
+ D++S G++L+ +++ PF + R +V + + PP ++ P L
Sbjct: 178 SNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPP-LIKNLPKPIESL 236
Query: 328 IGQLLNTHADKRPTAGQLLQV 348
+ + + +RP+ +++++
Sbjct: 237 MTRCWSKDPSQRPSMEEIVKI 257
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 60/141 (42%), Gaps = 10/141 (7%)
Query: 161 ALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQI 220
LA PV T +V + V+ Q T+T+ I + ++ AL HS I
Sbjct: 101 TLADIVKDPVSRTPALVFEHVNNTDFKQ---LYQTLTDYDIRFYMYEILKALDYCHSMGI 157
Query: 221 AHKDIRPENILMNGA--VLKLIDLGXXXXX-----XXXXLPDLEFASPEMLTSPATAGPS 273
H+D++P N++++ L+LID G + F PE+L S
Sbjct: 158 MHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYS 217
Query: 274 TDMWSLGVLLYILLSGVSPFL 294
DMWSLG +L ++ PF
Sbjct: 218 LDMWSLGCMLASMIFRKEPFF 238
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 113/261 (43%), Gaps = 24/261 (9%)
Query: 102 YEELER---LGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHI 158
Y+E+E +G G F V KA+ R VA+KQI E + + E LS + H +I
Sbjct: 8 YKEIEVEEVVGRGAFGVVCKAKWRAKD--VAIKQIESESERKAFI-VELRQLSRVNHPNI 64
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLI------QHLCRQSTITESYICCIIRQLHSAL 212
N PV +VM+ G SL + L + C Q + L
Sbjct: 65 VKLYGACLN-PV----CLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYL 119
Query: 213 HCLHSQQIAHKDIRPENILM--NGAVLKLIDLGXXXXXXXXXLPD---LEFASPEMLTSP 267
H + + + H+D++P N+L+ G VLK+ D G + + +PE+
Sbjct: 120 HSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEG- 178
Query: 268 ATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPAREL 327
+ D++S G++L+ +++ PF + R +V + + PP ++ P L
Sbjct: 179 SNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPP-LIKNLPKPIESL 237
Query: 328 IGQLLNTHADKRPTAGQLLQV 348
+ + + +RP+ +++++
Sbjct: 238 MTRCWSKDPSQRPSMEEIVKI 258
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 90/200 (45%), Gaps = 14/200 (7%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYN---LLSTLMHAH 157
RY+ L+ +G+G V A D + VA+K++ R Q Q + Y L+ + H +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR--QSTITESYICCIIRQLHSALHCL 215
I L +F P + + E + +LC+ Q + + ++ Q+ + L
Sbjct: 85 IIGLLNVF--TPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHL 142
Query: 216 HSQQIAHKDIRPENILMNG-AVLKLIDLGXXXXXXXXXLPDLE-----FASPEMLTSPAT 269
HS I H+D++P NI++ LK++D G + E + +PE++
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRYYRAPEVILGMGY 202
Query: 270 AGPSTDMWSLGVLLYILLSG 289
+ D+WS+G ++ ++ G
Sbjct: 203 K-ENVDIWSVGCIMGEMIKG 221
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 120/296 (40%), Gaps = 52/296 (17%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYN---LLSTLMHAH 157
RY+ L+ +G+G V A D + VA+K++ R Q Q + Y L+ + H +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR--QSTITESYICCIIRQLHSALHCL 215
I L +F P + + E + +LC+ Q + + ++ Q+ + L
Sbjct: 85 IIGLLNVF--TPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHL 142
Query: 216 HSQQIAHKDIRPENILMNG-AVLKLIDLGXXXXXXXXXLPDLE-----FASPEMLTSPAT 269
HS I H+D++P NI++ LK++D G + + E + +PE++
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGY 202
Query: 270 AGPSTDMWSLGVLL------YILLSG-----------------VSPFLDESEEETRAHI- 305
+ D+WS+G ++ IL G F+ + + R ++
Sbjct: 203 K-ENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVE 261
Query: 306 ---SVADYSFP--------PEQCGHISVP---ARELIGQLLNTHADKRPTAGQLLQ 347
A YSF P H + AR+L+ ++L A KR + + LQ
Sbjct: 262 NRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 94/227 (41%), Gaps = 21/227 (9%)
Query: 106 ERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRA---EYNLLSTLMHAHIPTAL 162
E++G G F V R R LVA+K RE P + E +L H +I +
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSC-RETLPPDLKAKFLQEARILKQYSHPNIVRLI 178
Query: 163 AL-FENAPVPGTDTIVMQLVHGESLIQHL-CRQSTITESYICCIIRQLHSALHCLHSQQI 220
+ + P+ IVM+LV G + L + + + ++ + + L S+
Sbjct: 179 GVCTQKQPI----YIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCC 234
Query: 221 AHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLPD--------LEFASPEMLTSPATAG 271
H+D+ N L+ VLK+ D G +++ +PE L +
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSS 294
Query: 272 PSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQC 317
S D+WS G+LL+ S G SP+ + S ++TR + PE C
Sbjct: 295 ES-DVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPELC 340
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 87/178 (48%), Gaps = 32/178 (17%)
Query: 204 IIRQLHSALHCLHSQQIAHKDIRPENILMN-----------GA-----------VLKLID 241
++RQ+ S + LHS +I H+D++P+NIL++ GA + K +D
Sbjct: 138 LLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD 197
Query: 242 LGXXXXXXXXXLPDLE--FASPEML--TSPATAGPSTDMWSLG-VLLYILLSGVSPFLDE 296
G P + +PE+L ++ S D++S+G V YIL G PF D+
Sbjct: 198 SGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDK 257
Query: 297 SEEETRAHISVADYSFPPEQCGH---ISVPARELIGQLLNTHADKRPTAGQLLQVAWF 351
E+ +I +S +C H + A +LI Q+++ KRPTA ++L+ F
Sbjct: 258 YSRES--NIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 313
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 98/238 (41%), Gaps = 18/238 (7%)
Query: 93 WQQEQFEHRYEEL---ERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNL 149
W ++++E E L ERLG G+F V G + VA+K + + AE NL
Sbjct: 9 WWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANL 67
Query: 150 LSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTI--TESYICCIIRQ 207
+ L H + A+ P+ I+ + + SL+ L S I T + + + Q
Sbjct: 68 MKQLQHQRLVRLYAVVTQEPI----YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 123
Query: 208 LHSALHCLHSQQIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDLEFAS-PEMLT 265
+ + + + H+D+R NIL++ + K+ D G E A P T
Sbjct: 124 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT 183
Query: 266 SP-----ATAGPSTDMWSLGVLLY-ILLSGVSPFLDESEEETRAHISVADYSFPPEQC 317
+P T +D+WS G+LL I+ G P+ + E ++ P+ C
Sbjct: 184 APEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 241
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 98/238 (41%), Gaps = 18/238 (7%)
Query: 93 WQQEQFEHRYEEL---ERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNL 149
W ++++E E L ERLG G+F V G + VA+K + + AE NL
Sbjct: 8 WWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANL 66
Query: 150 LSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTI--TESYICCIIRQ 207
+ L H + A+ P+ I+ + + SL+ L S I T + + + Q
Sbjct: 67 MKQLQHQRLVRLYAVVTQEPI----YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 122
Query: 208 LHSALHCLHSQQIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDLEFAS-PEMLT 265
+ + + + H+D+R NIL++ + K+ D G E A P T
Sbjct: 123 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT 182
Query: 266 SP-----ATAGPSTDMWSLGVLLY-ILLSGVSPFLDESEEETRAHISVADYSFPPEQC 317
+P T +D+WS G+LL I+ G P+ + E ++ P+ C
Sbjct: 183 APEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 240
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 87/178 (48%), Gaps = 32/178 (17%)
Query: 204 IIRQLHSALHCLHSQQIAHKDIRPENILMN-----------GA-----------VLKLID 241
++RQ+ S + LHS +I H+D++P+NIL++ GA + K +D
Sbjct: 138 LLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD 197
Query: 242 LGXXXXXXXXXLPDLE--FASPEML--TSPATAGPSTDMWSLG-VLLYILLSGVSPFLDE 296
G P + +PE+L ++ S D++S+G V YIL G PF D+
Sbjct: 198 SGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDK 257
Query: 297 SEEETRAHISVADYSFPPEQCGH---ISVPARELIGQLLNTHADKRPTAGQLLQVAWF 351
E+ +I +S +C H + A +LI Q+++ KRPTA ++L+ F
Sbjct: 258 YSRES--NIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 313
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 94/227 (41%), Gaps = 21/227 (9%)
Query: 106 ERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRA---EYNLLSTLMHAHIPTAL 162
E++G G F V R R LVA+K RE P + E +L H +I +
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSC-RETLPPDLKAKFLQEARILKQYSHPNIVRLI 178
Query: 163 AL-FENAPVPGTDTIVMQLVHGESLIQHL-CRQSTITESYICCIIRQLHSALHCLHSQQI 220
+ + P+ IVM+LV G + L + + + ++ + + L S+
Sbjct: 179 GVCTQKQPI----YIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCC 234
Query: 221 AHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLPD--------LEFASPEMLTSPATAG 271
H+D+ N L+ VLK+ D G +++ +PE L +
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSS 294
Query: 272 PSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQC 317
S D+WS G+LL+ S G SP+ + S ++TR + PE C
Sbjct: 295 ES-DVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPELC 340
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 68/148 (45%), Gaps = 15/148 (10%)
Query: 98 FEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHA- 156
F RY + +LG G F TV D + VA+K + + + E LL + +
Sbjct: 29 FNGRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYTETALDEIKLLKCVRESD 88
Query: 157 ----HIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESY-------ICCII 205
+ + L ++ + G + I + +V E L HL + I +Y + II
Sbjct: 89 PSDPNKDMVVQLIDDFKISGMNGIHVCMVF-EVLGHHLLKW-IIKSNYQGLPVRCVKSII 146
Query: 206 RQLHSALHCLHSQ-QIAHKDIRPENILM 232
RQ+ L LHS+ +I H DI+PENILM
Sbjct: 147 RQVLQGLDYLHSKCKIIHTDIKPENILM 174
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 93/204 (45%), Gaps = 14/204 (6%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYN---LLSTLMHAH 157
RY++L+ +G+G V A D G VA+K++ R Q Q + Y LL + H +
Sbjct: 23 RYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKN 82
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR--QSTITESYICCIIRQLHSALHCL 215
I + L +F P + + E + +LC+ + + ++ Q+ + L
Sbjct: 83 IISLLNVF--TPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHL 140
Query: 216 HSQQIAHKDIRPENILMNG-AVLKLIDLGXXXXXXXXXL--PDL---EFASPEMLTSPAT 269
HS I H+D++P NI++ LK++D G + P + + +PE++
Sbjct: 141 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAPEVILGMGY 200
Query: 270 AGPSTDMWSLGVLLYILLSGVSPF 293
+ D+WS+G ++ L+ G F
Sbjct: 201 K-ENVDIWSVGCIMGELVKGSVIF 223
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 93/226 (41%), Gaps = 33/226 (14%)
Query: 83 VLYTVPFETRWQQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQI 142
V Y E W Q RLG G F V + D+ TG A+K++ E +
Sbjct: 84 VDYEYREEVHWATHQL--------RLGRGSFGEVHRMEDKQTGFQCAVKKVRLE-----V 130
Query: 143 TRAEYNLLSTLMHAH--IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESY 200
RAE + + + +P A+ E V I M+L+ G SL Q + Q + E
Sbjct: 131 FRAEELMACAGLTSPRIVPLYGAVREGPWV----NIFMELLEGGSLGQLVKEQGCLPEDR 186
Query: 201 ICCIIRQLHSALHCLHSQQIAHKDIRPENILM--NGAVLKLIDLGXXXXXXXXXL----- 253
+ Q L LHS++I H D++ +N+L+ +G+ L D G L
Sbjct: 187 ALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLL 246
Query: 254 -----PDLE-FASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPF 293
P E +PE++ + D+WS ++ +L+G P+
Sbjct: 247 TGDYIPGTETHMAPEVVLG-RSCDAKVDVWSSCCMMLHMLNGCHPW 291
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 98/238 (41%), Gaps = 18/238 (7%)
Query: 93 WQQEQFEHRYEEL---ERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNL 149
W ++++E E L ERLG G+F V G + VA+K + + AE NL
Sbjct: 3 WWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANL 61
Query: 150 LSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTI--TESYICCIIRQ 207
+ L H + A+ P+ I+ + + SL+ L S I T + + + Q
Sbjct: 62 MKQLQHQRLVRLYAVVTQEPI----YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 117
Query: 208 LHSALHCLHSQQIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDLEFAS-PEMLT 265
+ + + + H+D+R NIL++ + K+ D G E A P T
Sbjct: 118 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT 177
Query: 266 SP-----ATAGPSTDMWSLGVLLY-ILLSGVSPFLDESEEETRAHISVADYSFPPEQC 317
+P T +D+WS G+LL I+ G P+ + E ++ P+ C
Sbjct: 178 APEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 235
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 88/194 (45%), Gaps = 14/194 (7%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYN---LLSTLMHAH 157
RY+ L+ +G+G V A D + VA+K++ R Q Q + Y L+ + H +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR--QSTITESYICCIIRQLHSALHCL 215
I L +F P + + E + +LC+ Q + + ++ Q+ + L
Sbjct: 85 IIGLLNVF--TPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHL 142
Query: 216 HSQQIAHKDIRPENILMNG-AVLKLIDLGXXXXXXXXXLPDLE-----FASPEMLTSPAT 269
HS I H+D++P NI++ LK++D G + + E + +PE++
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGY 202
Query: 270 AGPSTDMWSLGVLL 283
+ D+WS+G ++
Sbjct: 203 K-ENVDIWSVGCIM 215
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 93/226 (41%), Gaps = 33/226 (14%)
Query: 83 VLYTVPFETRWQQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQI 142
V Y E W Q RLG G F V + D+ TG A+K++ E +
Sbjct: 65 VDYEYREEVHWATHQL--------RLGRGSFGEVHRMEDKQTGFQCAVKKVRLE-----V 111
Query: 143 TRAEYNLLSTLMHAH--IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESY 200
RAE + + + +P A+ E V I M+L+ G SL Q + Q + E
Sbjct: 112 FRAEELMACAGLTSPRIVPLYGAVREGPWV----NIFMELLEGGSLGQLVKEQGCLPEDR 167
Query: 201 ICCIIRQLHSALHCLHSQQIAHKDIRPENILM--NGAVLKLIDLGXXXXXXXXXL----- 253
+ Q L LHS++I H D++ +N+L+ +G+ L D G L
Sbjct: 168 ALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLL 227
Query: 254 -----PDLE-FASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPF 293
P E +PE++ + D+WS ++ +L+G P+
Sbjct: 228 TGDYIPGTETHMAPEVVLG-RSCDAKVDVWSSCCMMLHMLNGCHPW 272
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 98/238 (41%), Gaps = 18/238 (7%)
Query: 93 WQQEQFEHRYEEL---ERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNL 149
W ++++E E L ERLG G+F V G + VA+K + + AE NL
Sbjct: 5 WWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANL 63
Query: 150 LSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTI--TESYICCIIRQ 207
+ L H + A+ P+ I+ + + SL+ L S I T + + + Q
Sbjct: 64 MKQLQHQRLVRLYAVVTQEPI----YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 119
Query: 208 LHSALHCLHSQQIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDLEFAS-PEMLT 265
+ + + + H+D+R NIL++ + K+ D G E A P T
Sbjct: 120 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT 179
Query: 266 SP-----ATAGPSTDMWSLGVLLY-ILLSGVSPFLDESEEETRAHISVADYSFPPEQC 317
+P T +D+WS G+LL I+ G P+ + E ++ P+ C
Sbjct: 180 APEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 237
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 7/153 (4%)
Query: 97 QFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP----QQITRAEYNLLST 152
Q RYE +G G + V +A D+ ++VA+K+I R + ++I R E +L+
Sbjct: 50 QIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILR-EIAILNR 108
Query: 153 LMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQST-ITESYICCIIRQLHSA 211
L H H+ L + V D + + L +S + L R +TE +I ++ L
Sbjct: 109 LNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVG 168
Query: 212 LHCLHSQQIAHKDIRPENILMN-GAVLKLIDLG 243
+ +HS I H+D++P N L+N +K+ D G
Sbjct: 169 VKYVHSAGILHRDLKPANCLVNQDCSVKVCDFG 201
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 98/238 (41%), Gaps = 18/238 (7%)
Query: 93 WQQEQFEHRYEEL---ERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNL 149
W ++++E E L ERLG G+F V G + VA+K + + AE NL
Sbjct: 3 WWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANL 61
Query: 150 LSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTI--TESYICCIIRQ 207
+ L H + A+ P+ I+ + + SL+ L S I T + + + Q
Sbjct: 62 MKQLQHQRLVRLYAVVTQEPI----YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 117
Query: 208 LHSALHCLHSQQIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDLEFAS-PEMLT 265
+ + + + H+D+R NIL++ + K+ D G E A P T
Sbjct: 118 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT 177
Query: 266 SP-----ATAGPSTDMWSLGVLLY-ILLSGVSPFLDESEEETRAHISVADYSFPPEQC 317
+P T +D+WS G+LL I+ G P+ + E ++ P+ C
Sbjct: 178 APEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 235
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 98/238 (41%), Gaps = 18/238 (7%)
Query: 93 WQQEQFEHRYEEL---ERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNL 149
W ++++E E L ERLG G+F V G + VA+K + + AE NL
Sbjct: 13 WWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANL 71
Query: 150 LSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTI--TESYICCIIRQ 207
+ L H + A+ P+ I+ + + SL+ L S I T + + + Q
Sbjct: 72 MKQLQHQRLVRLYAVVTQEPI----YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 127
Query: 208 LHSALHCLHSQQIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDLEFAS-PEMLT 265
+ + + + H+D+R NIL++ + K+ D G E A P T
Sbjct: 128 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWT 187
Query: 266 SP-----ATAGPSTDMWSLGVLLY-ILLSGVSPFLDESEEETRAHISVADYSFPPEQC 317
+P T +D+WS G+LL I+ G P+ + E ++ P+ C
Sbjct: 188 APEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 245
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 98/238 (41%), Gaps = 18/238 (7%)
Query: 93 WQQEQFEHRYEEL---ERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNL 149
W ++++E E L ERLG G+F V G + VA+K + + AE NL
Sbjct: 3 WWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANL 61
Query: 150 LSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTI--TESYICCIIRQ 207
+ L H + A+ P+ I+ + + SL+ L S I T + + + Q
Sbjct: 62 MKQLQHQRLVRLYAVVTQEPI----YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 117
Query: 208 LHSALHCLHSQQIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDLEFAS-PEMLT 265
+ + + + H+D+R NIL++ + K+ D G E A P T
Sbjct: 118 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT 177
Query: 266 SP-----ATAGPSTDMWSLGVLLY-ILLSGVSPFLDESEEETRAHISVADYSFPPEQC 317
+P T +D+WS G+LL I+ G P+ + E ++ P+ C
Sbjct: 178 APEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 235
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 98/238 (41%), Gaps = 18/238 (7%)
Query: 93 WQQEQFEHRYEEL---ERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNL 149
W ++++E E L ERLG G+F V G + VA+K + + AE NL
Sbjct: 12 WWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANL 70
Query: 150 LSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTI--TESYICCIIRQ 207
+ L H + A+ P+ I+ + + SL+ L S I T + + + Q
Sbjct: 71 MKQLQHQRLVRLYAVVTQEPI----YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 126
Query: 208 LHSALHCLHSQQIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDLEFAS-PEMLT 265
+ + + + H+D+R NIL++ + K+ D G E A P T
Sbjct: 127 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT 186
Query: 266 SP-----ATAGPSTDMWSLGVLLY-ILLSGVSPFLDESEEETRAHISVADYSFPPEQC 317
+P T +D+WS G+LL I+ G P+ + E ++ P+ C
Sbjct: 187 APEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 244
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 98/238 (41%), Gaps = 18/238 (7%)
Query: 93 WQQEQFEHRYEEL---ERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNL 149
W ++++E E L ERLG G+F V G + VA+K + + AE NL
Sbjct: 9 WWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANL 67
Query: 150 LSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTI--TESYICCIIRQ 207
+ L H + A+ P+ I+ + + SL+ L S I T + + + Q
Sbjct: 68 MKQLQHQRLVRLYAVVTQEPI----YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 123
Query: 208 LHSALHCLHSQQIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDLEFAS-PEMLT 265
+ + + + H+D+R NIL++ + K+ D G E A P T
Sbjct: 124 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT 183
Query: 266 SP-----ATAGPSTDMWSLGVLLY-ILLSGVSPFLDESEEETRAHISVADYSFPPEQC 317
+P T +D+WS G+LL I+ G P+ + E ++ P+ C
Sbjct: 184 APEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 241
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 98/238 (41%), Gaps = 18/238 (7%)
Query: 93 WQQEQFEHRYEEL---ERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNL 149
W ++++E E L ERLG G+F V G + VA+K + + AE NL
Sbjct: 4 WWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANL 62
Query: 150 LSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTI--TESYICCIIRQ 207
+ L H + A+ P+ I+ + + SL+ L S I T + + + Q
Sbjct: 63 MKQLQHQRLVRLYAVVTQEPI----YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 118
Query: 208 LHSALHCLHSQQIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDLEFAS-PEMLT 265
+ + + + H+D+R NIL++ + K+ D G E A P T
Sbjct: 119 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT 178
Query: 266 SP-----ATAGPSTDMWSLGVLLY-ILLSGVSPFLDESEEETRAHISVADYSFPPEQC 317
+P T +D+WS G+LL I+ G P+ + E ++ P+ C
Sbjct: 179 APEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 236
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 98/238 (41%), Gaps = 18/238 (7%)
Query: 93 WQQEQFEHRYEEL---ERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNL 149
W ++++E E L ERLG G+F V G + VA+K + + AE NL
Sbjct: 11 WWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANL 69
Query: 150 LSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTI--TESYICCIIRQ 207
+ L H + A+ P+ I+ + + SL+ L S I T + + + Q
Sbjct: 70 MKQLQHQRLVRLYAVVTQEPI----YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 125
Query: 208 LHSALHCLHSQQIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDLEFAS-PEMLT 265
+ + + + H+D+R NIL++ + K+ D G E A P T
Sbjct: 126 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWT 185
Query: 266 SP-----ATAGPSTDMWSLGVLLY-ILLSGVSPFLDESEEETRAHISVADYSFPPEQC 317
+P T +D+WS G+LL I+ G P+ + E ++ P+ C
Sbjct: 186 APEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 243
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 90/212 (42%), Gaps = 22/212 (10%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTL--MHAHIP 159
Y L+++G+G V + + Q+ A+K + E Q + N ++ L + H
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 160 TALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQ 219
+ L++ +VM+ + + L L ++ +I + + A+H +H
Sbjct: 117 KIIRLYDYEITDQYIYMVMECGNID-LNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG 175
Query: 220 IAHKDIRPENILMNGAVLKLIDLG--------XXXXXXXXXLPDLEFASPEMLTSPATAG 271
I H D++P N L+ +LKLID G + + + PE + +++
Sbjct: 176 IVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR 235
Query: 272 PS----------TDMWSLGVLLYILLSGVSPF 293
+ +D+WSLG +LY + G +PF
Sbjct: 236 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 267
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 90/212 (42%), Gaps = 22/212 (10%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTL--MHAHIP 159
Y L+++G+G V + + Q+ A+K + E Q + N ++ L + H
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 88
Query: 160 TALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQ 219
+ L++ +VM+ + + L L ++ +I + + A+H +H
Sbjct: 89 KIIRLYDYEITDQYIYMVMECGNID-LNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG 147
Query: 220 IAHKDIRPENILMNGAVLKLIDLG--------XXXXXXXXXLPDLEFASPEMLTSPATAG 271
I H D++P N L+ +LKLID G + + + PE + +++
Sbjct: 148 IVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR 207
Query: 272 PS----------TDMWSLGVLLYILLSGVSPF 293
+ +D+WSLG +LY + G +PF
Sbjct: 208 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 239
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 90/212 (42%), Gaps = 22/212 (10%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTL--MHAHIP 159
Y L+++G+G V + + Q+ A+K + E Q + N ++ L + H
Sbjct: 11 YSILKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 69
Query: 160 TALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQ 219
+ L++ +VM+ + + L L ++ +I + + A+H +H
Sbjct: 70 KIIRLYDYEITDQYIYMVMECGNID-LNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG 128
Query: 220 IAHKDIRPENILMNGAVLKLIDLG--------XXXXXXXXXLPDLEFASPEMLTSPATAG 271
I H D++P N L+ +LKLID G + + + PE + +++
Sbjct: 129 IVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR 188
Query: 272 PS----------TDMWSLGVLLYILLSGVSPF 293
+ +D+WSLG +LY + G +PF
Sbjct: 189 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 220
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 90/212 (42%), Gaps = 22/212 (10%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTL--MHAHIP 159
Y L+++G+G V + + Q+ A+K + E Q + N ++ L + H
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 88
Query: 160 TALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQ 219
+ L++ +VM+ + + L L ++ +I + + A+H +H
Sbjct: 89 KIIRLYDYEITDQYIYMVMECGNID-LNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG 147
Query: 220 IAHKDIRPENILMNGAVLKLIDLGXXXXX--------XXXXLPDLEFASPEMLTSPATAG 271
I H D++P N L+ +LKLID G + + + PE + +++
Sbjct: 148 IVHSDLKPANFLIVDGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSR 207
Query: 272 PS----------TDMWSLGVLLYILLSGVSPF 293
+ +D+WSLG +LY + G +PF
Sbjct: 208 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 239
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 88/208 (42%), Gaps = 16/208 (7%)
Query: 98 FEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQ---PQQITRAEYNLLSTLM 154
F ++ ++ LG G V+ A +R T + VA+K + +R P+ I + E + L
Sbjct: 4 FVEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-EICINKMLN 62
Query: 155 HAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHC 214
H ++ + + + + ++ G L + + E QL + +
Sbjct: 63 HENV---VKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVY 119
Query: 215 LHSQQIAHKDIRPENILMNGA-VLKLIDLGXXXXXX--------XXXLPDLEFASPEMLT 265
LH I H+DI+PEN+L++ LK+ D G L + +PE+L
Sbjct: 120 LHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 266 SPATAGPSTDMWSLGVLLYILLSGVSPF 293
D+WS G++L +L+G P+
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELPW 207
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 90/212 (42%), Gaps = 22/212 (10%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTL--MHAHIP 159
Y L+++G+G V + + Q+ A+K + E Q + N ++ L + H
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 160 TALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQ 219
+ L++ +VM+ + + L L ++ +I + + A+H +H
Sbjct: 117 KIIRLYDYEITDQYIYMVMECGNID-LNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG 175
Query: 220 IAHKDIRPENILMNGAVLKLIDLG--------XXXXXXXXXLPDLEFASPEMLTSPATAG 271
I H D++P N L+ +LKLID G + + + PE + +++
Sbjct: 176 IVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR 235
Query: 272 PS----------TDMWSLGVLLYILLSGVSPF 293
+ +D+WSLG +LY + G +PF
Sbjct: 236 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 267
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 126/299 (42%), Gaps = 58/299 (19%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYN---LLSTLMHAH 157
RY+ L+ +G+G V A D + VA+K++ R Q Q + Y L+ + H +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKN 84
Query: 158 IPTALALFENAPVPGTDT-----IVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSAL 212
I L +F P + IVM+L+ +L Q + Q + + ++ Q+ +
Sbjct: 85 IIGLLNVF--TPQKSLEEFQDVYIVMELMDA-NLSQVI--QMELDHERMSYLLYQMLVGI 139
Query: 213 HCLHSQQIAHKDIRPENILMNG-AVLKLIDLGXXXXXXXXXL--PDL---EFASPEMLTS 266
LHS I H+D++P NI++ A LK++D G + P + + +PE++
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 267 PATAGPSTDMWSLGVLLYILLSGV----------------------SP-FLDESEEETRA 303
+ D+WS+G ++ ++ G SP F+ + + R
Sbjct: 200 MGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRT 258
Query: 304 HI----SVADYSFP--------PEQCGHISVP---ARELIGQLLNTHADKRPTAGQLLQ 347
++ A YSF P H + AR+L+ ++L A KR + + LQ
Sbjct: 259 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 126/299 (42%), Gaps = 58/299 (19%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYN---LLSTLMHAH 157
RY+ L+ +G+G V A D + VA+K++ R Q Q + Y L+ + H +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKN 84
Query: 158 IPTALALFENAPVPGTDT-----IVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSAL 212
I L +F P + IVM+L+ +L Q + Q + + ++ Q+ +
Sbjct: 85 IIGLLNVF--TPQKSLEEFQDVYIVMELMDA-NLSQVI--QMELDHERMSYLLYQMLCGI 139
Query: 213 HCLHSQQIAHKDIRPENILMNG-AVLKLIDLGXXXXXXXXXL--PDL---EFASPEMLTS 266
LHS I H+D++P NI++ A LK++D G + P + + +PE++
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 267 PATAGPSTDMWSLGVLLYILLSGV----------------------SP-FLDESEEETRA 303
+ D+WS+G ++ ++ G SP F+ + + R
Sbjct: 200 MGYK-ENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQPTVRT 258
Query: 304 HI----SVADYSFP--------PEQCGHISVP---ARELIGQLLNTHADKRPTAGQLLQ 347
++ A YSF P H + AR+L+ ++L A KR + + LQ
Sbjct: 259 YVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 91/200 (45%), Gaps = 14/200 (7%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYN---LLSTLMHAH 157
RY+ L+ +G+G V A D + VA+K++ R Q Q + Y L+ + H +
Sbjct: 26 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 85
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR--QSTITESYICCIIRQLHSALHCL 215
I L +F P + + E + +LC+ Q + + ++ Q+ + L
Sbjct: 86 IIGLLNVF--TPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHL 143
Query: 216 HSQQIAHKDIRPENILMNG-AVLKLIDLGXXXXXXXXXL--PDL---EFASPEMLTSPAT 269
HS I H+D++P NI++ LK++D G + P + + +PE++
Sbjct: 144 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 203
Query: 270 AGPSTDMWSLGVLLYILLSG 289
+ D+WS+G ++ ++ G
Sbjct: 204 K-ENVDIWSVGCIMGEMIKG 222
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 9/158 (5%)
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
P + + + + G + +L++G L L RQ + I+RQ+ SAL H+
Sbjct: 94 PHVVPIHDFGEIDGQLYVDXRLINGVDLAAXLRRQGPLAPPRAVAIVRQIGSALDAAHAA 153
Query: 219 QIAHKDIRPENILMNGAVLK-LIDLGXXXXXXXXXLPDLE-------FASPEMLTSPATA 270
H+D++PENIL++ L+D G L L + +PE S + A
Sbjct: 154 GATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERF-SESHA 212
Query: 271 GPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVA 308
D+++L +LY L+G P+ + AHI+ A
Sbjct: 213 TYRADIYALTCVLYECLTGSPPYQGDQLSVXGAHINQA 250
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 90/212 (42%), Gaps = 22/212 (10%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTL--MHAHIP 159
Y L+++G+G V + + Q+ A+K + E Q + N ++ L + H
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 160 TALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQ 219
+ L++ +VM+ + + L L ++ +I + + A+H +H
Sbjct: 117 KIIRLYDYEITDQYIYMVMECGNID-LNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG 175
Query: 220 IAHKDIRPENILMNGAVLKLIDLG--------XXXXXXXXXLPDLEFASPEMLTSPATAG 271
I H D++P N L+ +LKLID G + + + PE + +++
Sbjct: 176 IVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSR 235
Query: 272 PS----------TDMWSLGVLLYILLSGVSPF 293
+ +D+WSLG +LY + G +PF
Sbjct: 236 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 267
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 89/200 (44%), Gaps = 14/200 (7%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYN---LLSTLMHAH 157
RY+ L+ +G+G V A D + VA+K++ R Q Q + Y L+ + H +
Sbjct: 27 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 86
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR--QSTITESYICCIIRQLHSALHCL 215
I L +F P + + E + +LC+ Q + + ++ Q+ + L
Sbjct: 87 IIGLLNVF--TPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHL 144
Query: 216 HSQQIAHKDIRPENILMNG-AVLKLIDLGXXXXXXXXXL-----PDLEFASPEMLTSPAT 269
HS I H+D++P NI++ LK++D G + + +PE++
Sbjct: 145 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVILGMGY 204
Query: 270 AGPSTDMWSLGVLLYILLSG 289
+ D+WS+G ++ ++ G
Sbjct: 205 K-ENVDIWSVGCIMGEMIKG 223
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 91/200 (45%), Gaps = 14/200 (7%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYN---LLSTLMHAH 157
RY+ L+ +G+G V A D + VA+K++ R Q Q + Y L+ + H +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR--QSTITESYICCIIRQLHSALHCL 215
I L +F P + + E + +LC+ Q + + ++ Q+ + L
Sbjct: 85 IIGLLNVF--TPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHL 142
Query: 216 HSQQIAHKDIRPENILMNG-AVLKLIDLGXXXXXXXXXL--PDL---EFASPEMLTSPAT 269
HS I H+D++P NI++ LK++D G + P + + +PE++
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 270 AGPSTDMWSLGVLLYILLSG 289
+ D+WS+G ++ ++ G
Sbjct: 203 K-ENVDIWSVGCIMGEMIKG 221
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 91/200 (45%), Gaps = 14/200 (7%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYN---LLSTLMHAH 157
RY+ L+ +G+G V A D + VA+K++ R Q Q + Y L+ + H +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR--QSTITESYICCIIRQLHSALHCL 215
I L +F P + + E + +LC+ Q + + ++ Q+ + L
Sbjct: 85 IIGLLNVF--TPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHL 142
Query: 216 HSQQIAHKDIRPENILMNG-AVLKLIDLGXXXXXXXXXL--PDL---EFASPEMLTSPAT 269
HS I H+D++P NI++ LK++D G + P + + +PE++
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 270 AGPSTDMWSLGVLLYILLSG 289
+ D+WS+G ++ ++ G
Sbjct: 203 K-ENVDIWSVGCIMGEMIKG 221
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 106/265 (40%), Gaps = 32/265 (12%)
Query: 101 RYEEL---ERLGNGRFCTVRKARDRGTGQL-------VALKQIPR-ERQPQQITRAEYNL 149
R E+L E LG G F + K R G V LK + + R + ++
Sbjct: 6 RNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASM 65
Query: 150 LSTLMHAHIPTALALFENAPVPGTDTIVMQ-LVHGESLIQHLCR-QSTITESYICCIIRQ 207
+S L H H L L V G + I++Q V SL +L + ++ I + + +Q
Sbjct: 66 MSKLSHKH----LVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQ 121
Query: 208 LHSALHCLHSQQIAHKDIRPENILM---------NGAVLKLIDLGXXXXXXXXXL--PDL 256
L +A+H L + H ++ +NIL+ N +KL D G + +
Sbjct: 122 LAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERI 181
Query: 257 EFASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQ 316
+ PE + +P +TD WS G L+ + SG L + + + + P +
Sbjct: 182 PWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQLPAPK 241
Query: 317 CGHISVPARELIGQLLNTHADKRPT 341
++ LI ++ D RP+
Sbjct: 242 AAELA----NLINNCMDYEPDHRPS 262
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 90/212 (42%), Gaps = 22/212 (10%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTL--MHAHIP 159
Y L+++G+G V + + Q+ A+K + E Q + N ++ L + H
Sbjct: 14 YSILKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 72
Query: 160 TALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQ 219
+ L++ +VM+ + + L L ++ +I + + A+H +H
Sbjct: 73 KIIRLYDYEITDQYIYMVMECGNID-LNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG 131
Query: 220 IAHKDIRPENILMNGAVLKLIDLG--------XXXXXXXXXLPDLEFASPEMLTSPATAG 271
I H D++P N L+ +LKLID G + + + PE + +++
Sbjct: 132 IVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR 191
Query: 272 PS----------TDMWSLGVLLYILLSGVSPF 293
+ +D+WSLG +LY + G +PF
Sbjct: 192 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 223
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 90/212 (42%), Gaps = 22/212 (10%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTL--MHAHIP 159
Y L+++G+G V + + Q+ A+K + E Q + N ++ L + H
Sbjct: 10 YSILKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 68
Query: 160 TALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQ 219
+ L++ +VM+ + + L L ++ +I + + A+H +H
Sbjct: 69 KIIRLYDYEITDQYIYMVMECGNID-LNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHG 127
Query: 220 IAHKDIRPENILMNGAVLKLIDLG--------XXXXXXXXXLPDLEFASPEMLTSPATAG 271
I H D++P N L+ +LKLID G + + + PE + +++
Sbjct: 128 IVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSR 187
Query: 272 PS----------TDMWSLGVLLYILLSGVSPF 293
+ +D+WSLG +LY + G +PF
Sbjct: 188 ENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 219
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 95/203 (46%), Gaps = 20/203 (9%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYN---LLSTLMHAH 157
RY+ L+ +G+G V A D + VA+K++ R Q Q + Y L+ + H +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 158 IPTALALFENAPVPGTDT-----IVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSAL 212
I L +F P + IVM+L+ +L Q + Q + + ++ Q+ +
Sbjct: 85 IIGLLNVF--TPQKSLEEFQDVYIVMELMDA-NLSQVI--QMELDHERMSYLLYQMLCGI 139
Query: 213 HCLHSQQIAHKDIRPENILMNG-AVLKLIDLGXXXXXXXXXL--PDL---EFASPEMLTS 266
LHS I H+D++P NI++ A LK++D G + P + + +PE++
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 267 PATAGPSTDMWSLGVLLYILLSG 289
+ D+WS+G ++ ++ G
Sbjct: 200 MGYK-ENVDIWSVGCIMGEMIKG 221
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 91/223 (40%), Gaps = 15/223 (6%)
Query: 105 LERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTALAL 164
+ERLG G+F V G + VA+K + + AE NL+ L H + A+
Sbjct: 13 VERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV 71
Query: 165 FENAPVPGTDTIVMQLVHGESLIQHLCRQSTI--TESYICCIIRQLHSALHCLHSQQIAH 222
P+ I+ + + SL+ L S I T + + + Q+ + + + H
Sbjct: 72 VTQEPI----YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH 127
Query: 223 KDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDLEFAS-PEMLTSP-----ATAGPSTD 275
+D+R NIL++ + K+ D G E A P T+P T +D
Sbjct: 128 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 187
Query: 276 MWSLGVLLY-ILLSGVSPFLDESEEETRAHISVADYSFPPEQC 317
+WS G+LL I+ G P+ + E ++ P+ C
Sbjct: 188 VWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 230
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 89/194 (45%), Gaps = 14/194 (7%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYN---LLSTLMHAH 157
RY+ L+ +G+G V A D + VA+K++ R Q Q + Y L+ + H +
Sbjct: 63 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 122
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR--QSTITESYICCIIRQLHSALHCL 215
I + L +F P + + E + +LC+ Q + + ++ Q+ + L
Sbjct: 123 IISLLNVF--TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHL 180
Query: 216 HSQQIAHKDIRPENILMNG-AVLKLIDLGXXXXXXXXXL--PDL---EFASPEMLTSPAT 269
HS I H+D++P NI++ LK++D G + P + + +PE++
Sbjct: 181 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 240
Query: 270 AGPSTDMWSLGVLL 283
+ D+WS+G ++
Sbjct: 241 K-ENVDIWSVGCIM 253
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 36/182 (19%)
Query: 204 IIRQLHSALHCLHSQQIAHKDIRPENILMN-----------GA-----------VLKLID 241
++RQ+ S + LHS +I H+D++P+NIL++ GA + K +D
Sbjct: 120 LLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD 179
Query: 242 LGXXXXXXXXXLPDLE--FASPEM------LTSPATAGPSTDMWSLG-VLLYILLSGVSP 292
G P + +PE+ L + S D++S+G V YIL G P
Sbjct: 180 SGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHP 239
Query: 293 FLDESEEETRAHISVADYSFPPEQCGH---ISVPARELIGQLLNTHADKRPTAGQLLQVA 349
F D+ E+ +I +S +C H + A +LI Q+++ KRPTA ++L+
Sbjct: 240 FGDKYSRES--NIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP 297
Query: 350 WF 351
F
Sbjct: 298 LF 299
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 120/296 (40%), Gaps = 52/296 (17%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYN---LLSTLMHAH 157
RY+ L+ +G+G V A D + VA+K++ R Q Q + Y L+ + H +
Sbjct: 19 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 78
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR--QSTITESYICCIIRQLHSALHCL 215
I L +F P + + E + +LC+ Q + + ++ Q+ + L
Sbjct: 79 IIGLLNVF--TPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHL 136
Query: 216 HSQQIAHKDIRPENILMNG-AVLKLIDLGXXXXXXXXXL--PDL---EFASPEMLTSPAT 269
HS I H+D++P NI++ LK++D G + P + + +PE++
Sbjct: 137 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 196
Query: 270 AGPSTDMWSLGVLL------YILLSG-----------------VSPFLDESEEETRAHI- 305
+ D+WS+G ++ IL G F+ + + R ++
Sbjct: 197 K-ENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVE 255
Query: 306 ---SVADYSFP--------PEQCGHISVP---ARELIGQLLNTHADKRPTAGQLLQ 347
A YSF P H + AR+L+ ++L A KR + + LQ
Sbjct: 256 NRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 311
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 90/205 (43%), Gaps = 14/205 (6%)
Query: 103 EELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTAL 162
++L +G G + +V K + +GQ++A+K+I ++ + +L + + P +
Sbjct: 25 KDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIV 84
Query: 163 ALFENAPVPGTDTIVMQLVHG--ESLIQHL--CRQSTITESYICCIIRQLHSAL-HCLHS 217
+ G I M+L+ + +++ I E + I AL H +
Sbjct: 85 QFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN 144
Query: 218 QQIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLPDLE-----FASPEMLTSPATA- 270
+I H+DI+P NIL++ +KL D G + + +PE + A+
Sbjct: 145 LKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQ 204
Query: 271 --GPSTDMWSLGVLLYILLSGVSPF 293
+D+WSLG+ LY L +G P+
Sbjct: 205 GYDVRSDVWSLGITLYELATGRFPY 229
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 89/194 (45%), Gaps = 14/194 (7%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYN---LLSTLMHAH 157
RY+ L+ +G+G V A D + VA+K++ R Q Q + Y L+ + H +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKN 84
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR--QSTITESYICCIIRQLHSALHCL 215
I + L +F P + + E + +LC+ Q + + ++ Q+ + L
Sbjct: 85 IISLLNVF--TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHL 142
Query: 216 HSQQIAHKDIRPENILMNG-AVLKLIDLGXXXXXXXXXL--PDL---EFASPEMLTSPAT 269
HS I H+D++P NI++ LK++D G + P + + +PE++
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 270 AGPSTDMWSLGVLL 283
+ D+WS+G ++
Sbjct: 203 K-ENVDIWSVGCIM 215
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 89/194 (45%), Gaps = 14/194 (7%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYN---LLSTLMHAH 157
RY+ L+ +G+G V A D + VA+K++ R Q Q + Y L+ + H +
Sbjct: 63 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 122
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR--QSTITESYICCIIRQLHSALHCL 215
I + L +F P + + E + +LC+ Q + + ++ Q+ + L
Sbjct: 123 IISLLNVF--TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHL 180
Query: 216 HSQQIAHKDIRPENILMNG-AVLKLIDLGXXXXXXXXXL--PDL---EFASPEMLTSPAT 269
HS I H+D++P NI++ LK++D G + P + + +PE++
Sbjct: 181 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 240
Query: 270 AGPSTDMWSLGVLL 283
+ D+WS+G ++
Sbjct: 241 K-ENVDIWSVGCIM 253
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 115/274 (41%), Gaps = 33/274 (12%)
Query: 96 EQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMH 155
++F ++E+E +G+G F V KA+ R G+ +K++ + + E L+ L H
Sbjct: 7 KRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAE---REVKALAKLDH 63
Query: 156 A---HIPTALALFENAPVPGTDT----------IVMQLVHGESLIQHL--CRQSTITESY 200
H F+ P + I M+ +L Q + R + +
Sbjct: 64 VNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVL 123
Query: 201 ICCIIRQLHSALHCLHSQQIAHKDIRPENI-LMNGAVLKLIDLG-----XXXXXXXXXLP 254
+ Q+ + +HS+++ ++D++P NI L++ +K+ D G
Sbjct: 124 ALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKG 183
Query: 255 DLEFASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPP 314
L + SPE ++S G D+++LG++L LL + S+ T + F
Sbjct: 184 TLRYMSPEQISSQ-DYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDGIISDIFDK 242
Query: 315 EQCGHISVPARELIGQLLNTHADKRPTAGQLLQV 348
++ + L+ +LL+ + RP ++L+
Sbjct: 243 KE--------KTLLQKLLSKKPEDRPNTSEILRT 268
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 89/194 (45%), Gaps = 14/194 (7%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYN---LLSTLMHAH 157
RY+ L+ +G+G V A D + VA+K++ R Q Q + Y L+ + H +
Sbjct: 19 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 78
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR--QSTITESYICCIIRQLHSALHCL 215
I + L +F P + + E + +LC+ Q + + ++ Q+ + L
Sbjct: 79 IISLLNVF--TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHL 136
Query: 216 HSQQIAHKDIRPENILMNG-AVLKLIDLGXXXXXXXXXL--PDL---EFASPEMLTSPAT 269
HS I H+D++P NI++ LK++D G + P + + +PE++
Sbjct: 137 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 196
Query: 270 AGPSTDMWSLGVLL 283
+ D+WS+G ++
Sbjct: 197 K-ENVDIWSVGCIM 209
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 89/194 (45%), Gaps = 14/194 (7%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYN---LLSTLMHAH 157
RY+ L+ +G+G V A D + VA+K++ R Q Q + Y L+ + H +
Sbjct: 24 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 83
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR--QSTITESYICCIIRQLHSALHCL 215
I + L +F P + + E + +LC+ Q + + ++ Q+ + L
Sbjct: 84 IISLLNVF--TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHL 141
Query: 216 HSQQIAHKDIRPENILMNG-AVLKLIDLGXXXXXXXXXL--PDL---EFASPEMLTSPAT 269
HS I H+D++P NI++ LK++D G + P + + +PE++
Sbjct: 142 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 201
Query: 270 AGPSTDMWSLGVLL 283
+ D+WS+G ++
Sbjct: 202 K-ENVDIWSVGCIM 214
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 89/194 (45%), Gaps = 14/194 (7%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYN---LLSTLMHAH 157
RY+ L+ +G+G V A D + VA+K++ R Q Q + Y L+ + H +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR--QSTITESYICCIIRQLHSALHCL 215
I + L +F P + + E + +LC+ Q + + ++ Q+ + L
Sbjct: 85 IISLLNVF--TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHL 142
Query: 216 HSQQIAHKDIRPENILMNG-AVLKLIDLGXXXXXXXXXL--PDL---EFASPEMLTSPAT 269
HS I H+D++P NI++ LK++D G + P + + +PE++
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 270 AGPSTDMWSLGVLL 283
+ D+WS+G ++
Sbjct: 203 K-ENVDIWSVGCIM 215
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/294 (20%), Positives = 119/294 (40%), Gaps = 47/294 (15%)
Query: 90 ETRWQ-QEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYN 148
ET++ ++F ++E+E +G+G F V KA+ R G+ ++++ + + E
Sbjct: 1 ETKYTVDKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAE---REVK 57
Query: 149 LLSTLMHA---HIPTALALFENAPVPGTDT-----------------------IVMQLVH 182
L+ L H H F+ P D+ I M+
Sbjct: 58 ALAKLDHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCD 117
Query: 183 GESLIQHL--CRQSTITESYICCIIRQLHSALHCLHSQQIAHKDIRPENI-LMNGAVLKL 239
+L Q + R + + + Q+ + +HS+++ H+D++P NI L++ +K+
Sbjct: 118 KGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKI 177
Query: 240 IDLG-----XXXXXXXXXLPDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFL 294
D G L + SPE ++S G D+++LG++L LL
Sbjct: 178 GDFGLVTSLKNDGKRTRSKGTLRYMSPEQISS-QDYGKEVDLYALGLILAELLHVCDTAF 236
Query: 295 DESEEETRAHISVADYSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV 348
+ S+ T + F ++ + L+ +LL+ + RP ++L+
Sbjct: 237 ETSKFFTDLRDGIISDIFDKKE--------KTLLQKLLSKKPEDRPNTSEILRT 282
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 89/194 (45%), Gaps = 14/194 (7%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYN---LLSTLMHAH 157
RY+ L+ +G+G V A D + VA+K++ R Q Q + Y L+ + H +
Sbjct: 26 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 85
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR--QSTITESYICCIIRQLHSALHCL 215
I + L +F P + + E + +LC+ Q + + ++ Q+ + L
Sbjct: 86 IISLLNVF--TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHL 143
Query: 216 HSQQIAHKDIRPENILMNG-AVLKLIDLGXXXXXXXXXL--PDL---EFASPEMLTSPAT 269
HS I H+D++P NI++ LK++D G + P + + +PE++
Sbjct: 144 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 203
Query: 270 AGPSTDMWSLGVLL 283
+ D+WS+G ++
Sbjct: 204 K-ENVDIWSVGCIM 216
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 89/194 (45%), Gaps = 14/194 (7%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYN---LLSTLMHAH 157
RY+ L+ +G+G V A D + VA+K++ R Q Q + Y L+ + H +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR--QSTITESYICCIIRQLHSALHCL 215
I + L +F P + + E + +LC+ Q + + ++ Q+ + L
Sbjct: 85 IISLLNVF--TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHL 142
Query: 216 HSQQIAHKDIRPENILMNG-AVLKLIDLGXXXXXXXXXL--PDL---EFASPEMLTSPAT 269
HS I H+D++P NI++ LK++D G + P + + +PE++
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 270 AGPSTDMWSLGVLL 283
+ D+WS+G ++
Sbjct: 203 K-ENVDIWSVGCIM 215
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 108/255 (42%), Gaps = 24/255 (9%)
Query: 105 LERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTALAL 164
L+ LG G+F V+ + RG VA+K I + E ++ L H + +
Sbjct: 14 LKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 72
Query: 165 -FENAPVPGTDTIVMQLVHGESLIQHL--CRQSTITESYICCIIRQLHSALHCLHSQQIA 221
+ P+ I+ + + L+ +L R T+ + + + + A+ L S+Q
Sbjct: 73 CTKQRPI----FIITEYMANGCLLNYLREMRHRFQTQQ-LLEMCKDVCEAMEYLESKQFL 127
Query: 222 HKDIRPENILMNG-AVLKLIDLGXXXXXXXXXLPD-------LEFASPEMLTSPATAGPS 273
H+D+ N L+N V+K+ D G + ++ PE+L + S
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKS 187
Query: 274 TDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQCGHI-SVPARELIGQL 331
D+W+ GVL++ + S G P+ + ET HI+ + P H+ S ++
Sbjct: 188 -DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRP----HLASEKVYTIMYSC 242
Query: 332 LNTHADKRPTAGQLL 346
+ AD+RPT LL
Sbjct: 243 WHEKADERPTFKILL 257
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 89/194 (45%), Gaps = 14/194 (7%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYN---LLSTLMHAH 157
RY+ L+ +G+G V A D + VA+K++ R Q Q + Y L+ + H +
Sbjct: 18 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 77
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR--QSTITESYICCIIRQLHSALHCL 215
I + L +F P + + E + +LC+ Q + + ++ Q+ + L
Sbjct: 78 IISLLNVF--TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHL 135
Query: 216 HSQQIAHKDIRPENILMNG-AVLKLIDLGXXXXXXXXXL--PDL---EFASPEMLTSPAT 269
HS I H+D++P NI++ LK++D G + P + + +PE++
Sbjct: 136 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 195
Query: 270 AGPSTDMWSLGVLL 283
+ D+WS+G ++
Sbjct: 196 K-ENVDIWSVGCIM 208
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 69/147 (46%), Gaps = 11/147 (7%)
Query: 98 FEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAH 157
F RY + +LG G F TV + D + VA+K + + E LL ++ ++
Sbjct: 19 FNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSD 78
Query: 158 --------IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICC--IIRQ 207
+ L F+ + V GT ++ V G L++ + + + C II+Q
Sbjct: 79 PNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQ 138
Query: 208 LHSALHCLHSQ-QIAHKDIRPENILMN 233
+ L LH++ +I H DI+PENIL++
Sbjct: 139 VLQGLDYLHTKCRIIHTDIKPENILLS 165
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 89/194 (45%), Gaps = 14/194 (7%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYN---LLSTLMHAH 157
RY+ L+ +G+G V A D + VA+K++ R Q Q + Y L+ + H +
Sbjct: 19 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 78
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR--QSTITESYICCIIRQLHSALHCL 215
I + L +F P + + E + +LC+ Q + + ++ Q+ + L
Sbjct: 79 IISLLNVF--TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHL 136
Query: 216 HSQQIAHKDIRPENILMNG-AVLKLIDLGXXXXXXXXXL--PDL---EFASPEMLTSPAT 269
HS I H+D++P NI++ LK++D G + P + + +PE++
Sbjct: 137 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 196
Query: 270 AGPSTDMWSLGVLL 283
+ D+WS+G ++
Sbjct: 197 K-ENVDIWSVGCIM 209
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 108/255 (42%), Gaps = 24/255 (9%)
Query: 105 LERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTALAL 164
L+ LG G+F V+ + RG VA+K I + E ++ L H + +
Sbjct: 13 LKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 71
Query: 165 -FENAPVPGTDTIVMQLVHGESLIQHL--CRQSTITESYICCIIRQLHSALHCLHSQQIA 221
+ P+ I+ + + L+ +L R T+ + + + + A+ L S+Q
Sbjct: 72 CTKQRPI----FIITEYMANGCLLNYLREMRHRFQTQQ-LLEMCKDVCEAMEYLESKQFL 126
Query: 222 HKDIRPENILMNG-AVLKLIDLGXXXXXXXXXLPD-------LEFASPEMLTSPATAGPS 273
H+D+ N L+N V+K+ D G + ++ PE+L + S
Sbjct: 127 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 186
Query: 274 TDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQCGHI-SVPARELIGQL 331
D+W+ GVL++ + S G P+ + ET HI+ + P H+ S ++
Sbjct: 187 -DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRP----HLASEKVYTIMYSC 241
Query: 332 LNTHADKRPTAGQLL 346
+ AD+RPT LL
Sbjct: 242 WHEKADERPTFKILL 256
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 120/296 (40%), Gaps = 52/296 (17%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYN---LLSTLMHAH 157
RY+ L+ +G+G V A D + VA+K++ R Q Q + Y L+ + H +
Sbjct: 30 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 89
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR--QSTITESYICCIIRQLHSALHCL 215
I L +F P + + E + +LC+ Q + + ++ Q+ + L
Sbjct: 90 IIGLLNVF--TPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHL 147
Query: 216 HSQQIAHKDIRPENILMNG-AVLKLIDLGXXXXXXXXXL--PDL---EFASPEMLTSPAT 269
HS I H+D++P NI++ LK++D G + P + + +PE++
Sbjct: 148 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 207
Query: 270 AGPSTDMWSLGVLL------YILLSG-----------------VSPFLDESEEETRAHI- 305
+ D+WS+G ++ IL G F+ + + R ++
Sbjct: 208 K-ENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVE 266
Query: 306 ---SVADYSFP--------PEQCGHISVP---ARELIGQLLNTHADKRPTAGQLLQ 347
A YSF P H + AR+L+ ++L A KR + + LQ
Sbjct: 267 NRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 322
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 96/224 (42%), Gaps = 27/224 (12%)
Query: 84 LYTVPFETRWQQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQIT 143
L V +E R + H+ RLG G F V + +D+ TG A+K++ E +
Sbjct: 60 LKPVDYEYREEVHWMTHQ----PRLGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEEL 115
Query: 144 RAEYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICC 203
A L S + +P A+ E V I M+L+ G SL Q + + + E
Sbjct: 116 VACAGLSSPRI---VPLYGAVREGPWV----NIFMELLEGGSLGQLIKQMGCLPEDRALY 168
Query: 204 IIRQLHSALHCLHSQQIAHKDIRPENILM--NGAVLKLIDLG----------XXXXXXXX 251
+ Q L LH+++I H D++ +N+L+ +G+ L D G
Sbjct: 169 YLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD 228
Query: 252 XLPDLE-FASPE-MLTSPATAGPSTDMWSLGVLLYILLSGVSPF 293
+P E +PE ++ P A D+WS ++ +L+G P+
Sbjct: 229 YIPGTETHMAPEVVMGKPCDA--KVDIWSSCCMMLHMLNGCHPW 270
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 69/147 (46%), Gaps = 11/147 (7%)
Query: 98 FEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAH 157
F RY + +LG G F TV + D + VA+K + + E LL ++ ++
Sbjct: 35 FNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSD 94
Query: 158 --------IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICC--IIRQ 207
+ L F+ + V GT ++ V G L++ + + + C II+Q
Sbjct: 95 PNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQ 154
Query: 208 LHSALHCLHSQ-QIAHKDIRPENILMN 233
+ L LH++ +I H DI+PENIL++
Sbjct: 155 VLQGLDYLHTKCRIIHTDIKPENILLS 181
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 89/194 (45%), Gaps = 14/194 (7%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYN---LLSTLMHAH 157
RY+ L+ +G+G V A D + VA+K++ R Q Q + Y L+ + H +
Sbjct: 26 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 85
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR--QSTITESYICCIIRQLHSALHCL 215
I + L +F P + + E + +LC+ Q + + ++ Q+ + L
Sbjct: 86 IISLLNVF--TPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHL 143
Query: 216 HSQQIAHKDIRPENILMNG-AVLKLIDLGXXXXXXXXXL--PDL---EFASPEMLTSPAT 269
HS I H+D++P NI++ LK++D G + P + + +PE++
Sbjct: 144 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 203
Query: 270 AGPSTDMWSLGVLL 283
+ D+WS+G ++
Sbjct: 204 K-ENVDIWSVGCIM 216
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 108/255 (42%), Gaps = 24/255 (9%)
Query: 105 LERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTALAL 164
L+ LG G+F V+ + RG VA+K I + E ++ L H + +
Sbjct: 14 LKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 72
Query: 165 -FENAPVPGTDTIVMQLVHGESLIQHL--CRQSTITESYICCIIRQLHSALHCLHSQQIA 221
+ P+ I+ + + L+ +L R T+ + + + + A+ L S+Q
Sbjct: 73 CTKQRPI----FIITEYMANGCLLNYLREMRHRFQTQQ-LLEMCKDVCEAMEYLESKQFL 127
Query: 222 HKDIRPENILMNG-AVLKLIDLGXXXXXXXXXLPD-------LEFASPEMLTSPATAGPS 273
H+D+ N L+N V+K+ D G + ++ PE+L + S
Sbjct: 128 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 187
Query: 274 TDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQCGHI-SVPARELIGQL 331
D+W+ GVL++ + S G P+ + ET HI+ + P H+ S ++
Sbjct: 188 -DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRP----HLASEKVYTIMYSC 242
Query: 332 LNTHADKRPTAGQLL 346
+ AD+RPT LL
Sbjct: 243 WHEKADERPTFKILL 257
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 86/182 (47%), Gaps = 36/182 (19%)
Query: 204 IIRQLHSALHCLHSQQIAHKDIRPENILMN-----------GA-----------VLKLID 241
++RQ+ S + LHS +I H+D++P+NIL++ GA + K +D
Sbjct: 120 LLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD 179
Query: 242 LGXXXXXXXXXLPDLE--FASPEM------LTSPATAGPSTDMWSLG-VLLYILLSGVSP 292
G P + +PE+ L + S D++S+G V YIL G P
Sbjct: 180 SGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHP 239
Query: 293 FLDESEEETRAHISVADYSFPPEQCGH---ISVPARELIGQLLNTHADKRPTAGQLLQVA 349
F D+ E+ +I +S +C H + A +LI Q+++ KRPTA ++L+
Sbjct: 240 FGDKYSRES--NIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP 297
Query: 350 WF 351
F
Sbjct: 298 LF 299
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 90/209 (43%), Gaps = 22/209 (10%)
Query: 98 FEHRY-EELERLGNGRFCTVR----KARDRGTGQLVALKQIPRERQPQQIT--RAEYNLL 150
F RY +++ LG G F V + GTG++VA+K + PQ + + E +L
Sbjct: 5 FHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEIL 64
Query: 151 STLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHS 210
TL H HI E+ +VM+ V SL +L R + + + +Q+
Sbjct: 65 RTLYHEHIVKYKGCCEDQGEKSVQ-LVMEYVPLGSLRDYLPRHC-VGLAQLLLFAQQICE 122
Query: 211 ALHCLHSQQIAHKDIRPENILM-NGAVLKLIDLGXXXXX----------XXXXLPDLEFA 259
+ LH+Q H+ + N+L+ N ++K+ D G P +A
Sbjct: 123 GMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA 182
Query: 260 SPEMLTSPATAGPSTDMWSLGVLLYILLS 288
PE L ++D+WS GV LY LL+
Sbjct: 183 -PECLKE-CKFYYASDVWSFGVTLYELLT 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 90/209 (43%), Gaps = 22/209 (10%)
Query: 98 FEHRY-EELERLGNGRFCTVR----KARDRGTGQLVALKQIPRERQPQQIT--RAEYNLL 150
F RY +++ LG G F V + GTG++VA+K + PQ + + E +L
Sbjct: 6 FHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEIL 65
Query: 151 STLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHS 210
TL H HI E+ +VM+ V SL +L R + + + +Q+
Sbjct: 66 RTLYHEHIVKYKGCCEDQGEKSVQ-LVMEYVPLGSLRDYLPRHC-VGLAQLLLFAQQICE 123
Query: 211 ALHCLHSQQIAHKDIRPENILM-NGAVLKLIDLGXXXXX----------XXXXLPDLEFA 259
+ LH+Q H+ + N+L+ N ++K+ D G P +A
Sbjct: 124 GMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYA 183
Query: 260 SPEMLTSPATAGPSTDMWSLGVLLYILLS 288
PE L ++D+WS GV LY LL+
Sbjct: 184 -PECLKE-CKFYYASDVWSFGVTLYELLT 210
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 108/255 (42%), Gaps = 24/255 (9%)
Query: 105 LERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTALAL 164
L+ LG G+F V+ + RG VA+K I + E ++ L H + +
Sbjct: 20 LKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 78
Query: 165 -FENAPVPGTDTIVMQLVHGESLIQHL--CRQSTITESYICCIIRQLHSALHCLHSQQIA 221
+ P+ I+ + + L+ +L R T+ + + + + A+ L S+Q
Sbjct: 79 CTKQRPI----FIITEYMANGCLLNYLREMRHRFQTQQ-LLEMCKDVCEAMEYLESKQFL 133
Query: 222 HKDIRPENILMNG-AVLKLIDLGXXXXXXXXXLPD-------LEFASPEMLTSPATAGPS 273
H+D+ N L+N V+K+ D G + ++ PE+L + S
Sbjct: 134 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 193
Query: 274 TDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQCGHI-SVPARELIGQL 331
D+W+ GVL++ + S G P+ + ET HI+ + P H+ S ++
Sbjct: 194 -DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRP----HLASEKVYTIMYSC 248
Query: 332 LNTHADKRPTAGQLL 346
+ AD+RPT LL
Sbjct: 249 WHEKADERPTFKILL 263
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 97/242 (40%), Gaps = 42/242 (17%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTALALFEN 167
L G F V +A+D G+G+ ALK++ + + + + H P +
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGH-PNIVQFCSA 94
Query: 168 APVPGTDT--------IVMQLVHGE--SLIQHLCRQSTITESYICCIIRQLHSALHCLHS 217
A + ++ ++ +L G+ ++ + + ++ + I Q A+ +H
Sbjct: 95 ASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHR 154
Query: 218 QQ--IAHKDIRPENILM-NGAVLKLIDLGXXXXXXXXXLPDLE----------------- 257
Q+ I H+D++ EN+L+ N +KL D G PD
Sbjct: 155 QKPPIIHRDLKVENLLLSNQGTIKLCDFG--SATTISHYPDYSWSAQRRALVEEEITRNT 212
Query: 258 ---FASPEM--LTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSF 312
+ +PE+ L S G D+W+LG +LY+L PF E+ + I YS
Sbjct: 213 TPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPF----EDGAKLRIVNGKYSI 268
Query: 313 PP 314
PP
Sbjct: 269 PP 270
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 108/255 (42%), Gaps = 24/255 (9%)
Query: 105 LERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTALAL 164
L+ LG G+F V+ + RG VA+K I + E ++ L H + +
Sbjct: 9 LKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 67
Query: 165 -FENAPVPGTDTIVMQLVHGESLIQHL--CRQSTITESYICCIIRQLHSALHCLHSQQIA 221
+ P+ I+ + + L+ +L R T+ + + + + A+ L S+Q
Sbjct: 68 CTKQRPI----FIITEYMANGCLLNYLREMRHRFQTQQ-LLEMCKDVCEAMEYLESKQFL 122
Query: 222 HKDIRPENILMNG-AVLKLIDLGXXXXXXXXXLPD-------LEFASPEMLTSPATAGPS 273
H+D+ N L+N V+K+ D G + ++ PE+L + S
Sbjct: 123 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 182
Query: 274 TDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQCGHI-SVPARELIGQL 331
D+W+ GVL++ + S G P+ + ET HI+ + P H+ S ++
Sbjct: 183 -DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRP----HLASEKVYTIMYSC 237
Query: 332 LNTHADKRPTAGQLL 346
+ AD+RPT LL
Sbjct: 238 WHEKADERPTFKILL 252
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 108/255 (42%), Gaps = 24/255 (9%)
Query: 105 LERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTALAL 164
L+ LG G+F V+ + RG VA+K I + E ++ L H + +
Sbjct: 29 LKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 87
Query: 165 -FENAPVPGTDTIVMQLVHGESLIQHL--CRQSTITESYICCIIRQLHSALHCLHSQQIA 221
+ P+ I+ + + L+ +L R T+ + + + + A+ L S+Q
Sbjct: 88 CTKQRPI----FIITEYMANGCLLNYLREMRHRFQTQQ-LLEMCKDVCEAMEYLESKQFL 142
Query: 222 HKDIRPENILMNG-AVLKLIDLGXXXXXXXXXLPD-------LEFASPEMLTSPATAGPS 273
H+D+ N L+N V+K+ D G + ++ PE+L + S
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 202
Query: 274 TDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQCGHI-SVPARELIGQL 331
D+W+ GVL++ + S G P+ + ET HI+ + P H+ S ++
Sbjct: 203 -DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRP----HLASEKVYTIMYSC 257
Query: 332 LNTHADKRPTAGQLL 346
+ AD+RPT LL
Sbjct: 258 WHEKADERPTFKILL 272
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 110/259 (42%), Gaps = 32/259 (12%)
Query: 105 LERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTALAL 164
L+ LG G+F V+ + RG VA+K I + E ++ L H + +
Sbjct: 29 LKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGV 87
Query: 165 -FENAPVPGTDTIVMQLVHGESLIQHL--CRQSTITESYICCIIRQLHSALHCLHSQQIA 221
+ P+ I+ + + L+ +L R T+ + + + + A+ L S+Q
Sbjct: 88 CTKQRPI----FIITEYMANGCLLNYLREMRHRFQTQQ-LLEMCKDVCEAMEYLESKQFL 142
Query: 222 HKDIRPENILMNG-AVLKLIDLGXXXXXXXXXLPDLEFAS-----------PEMLTSPAT 269
H+D+ N L+N V+K+ D G L D E +S PE+L
Sbjct: 143 HRDLAARNCLVNDQGVVKVSDFG----LSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKF 198
Query: 270 AGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQCGHI-SVPAREL 327
+ S D+W+ GVL++ + S G P+ + ET HI+ + P H+ S +
Sbjct: 199 SSKS-DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRP----HLASEKVYTI 253
Query: 328 IGQLLNTHADKRPTAGQLL 346
+ + AD+RPT LL
Sbjct: 254 MYSCWHEKADERPTFKILL 272
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 99/217 (45%), Gaps = 31/217 (14%)
Query: 97 QFEHRY-EELERLGNGRFCTVRKAR----DRGTGQLVALKQIPR--ERQPQQITRAEYNL 149
QFE R+ + L++LG G F +V R TG++VA+K++ E + R E +
Sbjct: 6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER-EIEI 64
Query: 150 LSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR-QSTITESYICCIIRQL 208
L +L H +I + +A I+ L +G SL +L + + I + Q+
Sbjct: 65 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG-SLRDYLQKHKERIDHIKLLQYTSQI 123
Query: 209 HSALHCLHSQQIAHKDIRPENILM-NGAVLKLIDLGXXXXXXXXXLP-DLEF-------- 258
+ L +++ H+D+ NIL+ N +K+ D G LP D EF
Sbjct: 124 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV-----LPQDKEFFKVKEPGE 178
Query: 259 -----ASPEMLTSPATAGPSTDMWSLGVLLYILLSGV 290
+PE LT + ++D+WS GV+LY L + +
Sbjct: 179 SPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFTYI 214
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 123/295 (41%), Gaps = 59/295 (20%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQI---PRERQPQQITRAEYNLLSTLMHAHI 158
+E ++ LG G F V +A+++ A+K+I RE +++ R E L+ L H I
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMR-EVKALAKLEHPGI 65
Query: 159 PTALALFENAPVPGTDT-------------IVMQLVHGESLIQHLCRQSTI--TESYICC 203
+ NA + T I MQL E+L + + TI E +C
Sbjct: 66 ----VRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCL 121
Query: 204 -IIRQLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXX--------L 253
I Q+ A+ LHS+ + H+D++P NI V+K+ D G +
Sbjct: 122 HIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPM 181
Query: 254 PDLE----------FASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRA 303
P + SPE + + + D++SLG++L+ LL PF + E R
Sbjct: 182 PAYARHTGQVGTKLYMSPEQIHGNSYSH-KVDIFSLGLILFELL---YPFSTQM-ERVRT 236
Query: 304 HISVADYSFPP-----EQCGHISVPARELIGQLLNTHADKRPTAGQLLQVAWFAE 353
V + FPP C ++ ++ +L+ +RP A +++ A F +
Sbjct: 237 LTDVRNLKFPPLFTQKYPCEYV------MVQDMLSPSPMERPEAINIIENAVFED 285
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 102/249 (40%), Gaps = 22/249 (8%)
Query: 105 LERLGNGRFCTVRKARDRGTGQLVALKQI-PRERQPQQITRAEYNLLSTLMHAHIPTALA 163
++RLGNG+F V G + VA+K + P P+ E ++ L H + A
Sbjct: 14 IKRLGNGQFGEVWMGTWNGNTK-VAIKTLKPGTMSPESFLE-EAQIMKKLKHDKLVQLYA 71
Query: 164 LFENAPVPGTDTIVMQLVHGESLIQHL--CRQSTITESYICCIIRQLHSALHCLHSQQIA 221
+ P+ IV + ++ SL+ L + + + Q+ + + +
Sbjct: 72 VVSEEPI----YIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYI 127
Query: 222 HKDIRPENILM-NGAVLKLIDLGXXXXXXXXXLPDLEFAS-PEMLTSPATA-----GPST 274
H+D+R NIL+ NG + K+ D G + A P T+P A +
Sbjct: 128 HRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 187
Query: 275 DMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP-PEQCGHISVPARELIGQLL 332
D+WS G+LL L++ G P+ + E + Y P P+ C + EL+
Sbjct: 188 DVWSFGILLTELVTKGRVPYPGMNNREVLEQVERG-YRMPCPQDC---PISLHELMIHCW 243
Query: 333 NTHADKRPT 341
++RPT
Sbjct: 244 KKDPEERPT 252
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 101/253 (39%), Gaps = 42/253 (16%)
Query: 93 WQQEQFEHRYEELERLGNGRFCTVRKARD-RGTGQLVALKQIPRERQPQQITRAEYNLLS 151
W QE RYE + LG G F V + D R G VALK I + ++ R E N+L
Sbjct: 30 WLQE----RYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAARLEINVLE 85
Query: 152 TLMHA---HIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIR-- 206
+ + + +F+ G I +L+ G S L + + Y +R
Sbjct: 86 KINEKDPDNKNLCVQMFDWFDYHGHMCISFELL-GLSTFDFLKDNNYL--PYPIHQVRHM 142
Query: 207 --QLHSALHCLHSQQIAHKDIRPENIL--------------------MNGAVLKLIDLGX 244
QL A+ LH ++ H D++PENIL + ++++D G
Sbjct: 143 AFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGS 202
Query: 245 XX---XXXXXXLPDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEET 301
+ + +PE++ + P D+WS+G +++ G + F +
Sbjct: 203 ATFDHEHHSTIVSTRHYRAPEVILELGWSQP-CDVWSIGCIIFEYYVGFTLF---QTHDN 258
Query: 302 RAHISVADYSFPP 314
R H+++ + P
Sbjct: 259 REHLAMMERILGP 271
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 20/203 (9%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYN---LLSTLMHAH 157
RY+ L+ +G+G V A D + VA+K++ R Q Q + Y L+ + H +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 158 IPTALALFENAPVPGTDT-----IVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSAL 212
I L +F P + IVM+L+ +L Q + Q + + ++ Q+ +
Sbjct: 85 IIGLLNVF--TPQKSLEEFQDVYIVMELMDA-NLSQVI--QMELDHERMSYLLYQMLCGI 139
Query: 213 HCLHSQQIAHKDIRPENILMNG-AVLKLIDLGXXXXXXXXXL--PDL---EFASPEMLTS 266
LHS I H+D++P NI++ LK++D G + P + + +PE++
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILG 199
Query: 267 PATAGPSTDMWSLGVLLYILLSG 289
+ D+WS+G ++ ++ G
Sbjct: 200 MGYK-ENVDIWSVGCIMGEMIKG 221
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 96/224 (42%), Gaps = 27/224 (12%)
Query: 84 LYTVPFETRWQQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQIT 143
L V +E R + H+ R+G G F V + +D+ TG A+K++ E +
Sbjct: 62 LKPVDYEYREEVHWMTHQ----PRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEEL 117
Query: 144 RAEYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICC 203
A L S + +P A+ E V I M+L+ G SL Q + + + E
Sbjct: 118 VACAGLSSPRI---VPLYGAVREGPWV----NIFMELLEGGSLGQLIKQMGCLPEDRALY 170
Query: 204 IIRQLHSALHCLHSQQIAHKDIRPENILM--NGAVLKLIDLG----------XXXXXXXX 251
+ Q L LH+++I H D++ +N+L+ +G+ L D G
Sbjct: 171 YLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD 230
Query: 252 XLPDLE-FASPE-MLTSPATAGPSTDMWSLGVLLYILLSGVSPF 293
+P E +PE ++ P A D+WS ++ +L+G P+
Sbjct: 231 YIPGTETHMAPEVVMGKPCDA--KVDIWSSCCMMLHMLNGCHPW 272
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 91/223 (40%), Gaps = 15/223 (6%)
Query: 105 LERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTALAL 164
+ERLG G+F V G + VA+K + + AE NL+ L H + A+
Sbjct: 14 VERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAV 72
Query: 165 FENAPVPGTDTIVMQLVHGESLIQHLCRQSTI--TESYICCIIRQLHSALHCLHSQQIAH 222
P+ I+ + + SL+ L S I T + + + Q+ + + + H
Sbjct: 73 VTQEPI----YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH 128
Query: 223 KDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDLEFAS-PEMLTSP-----ATAGPSTD 275
+++R NIL++ + K+ D G E A P T+P T +D
Sbjct: 129 RNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSD 188
Query: 276 MWSLGVLLY-ILLSGVSPFLDESEEETRAHISVADYSFPPEQC 317
+WS G+LL I+ G P+ + E ++ P+ C
Sbjct: 189 VWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 231
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 89/194 (45%), Gaps = 14/194 (7%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYN---LLSTLMHAH 157
RY+ L+ +G+G V A D + VA+K++ R Q Q + Y L+ + H +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKN 84
Query: 158 IPTALALF--ENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
I + L +F + D ++ + +L Q + Q + + ++ Q+ + L
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI--QMELDHERMSYLLYQMLXGIKHL 142
Query: 216 HSQQIAHKDIRPENILMNG-AVLKLIDLGXXXXXXXXXL--PDL---EFASPEMLTSPAT 269
HS I H+D++P NI++ LK++D G + P + + +PE++
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 270 AGPSTDMWSLGVLL 283
+ D+WS+G ++
Sbjct: 203 K-ENVDIWSVGCIM 215
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 103/235 (43%), Gaps = 24/235 (10%)
Query: 84 LYTVPF-ETRWQQEQ--FEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQ 140
LY + F + +W + Q E + + LG G F V + + TG+L A K++ ++R +
Sbjct: 166 LYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKK 225
Query: 141 ----QITRAEYNLLSTLMHAHIPTALALFENAPVPGTD-TIVMQLVHGESLIQHLCR--- 192
Q E +L+ + I + FE TD +VM +++G + H+
Sbjct: 226 RKGYQGAMVEKKILAKVHSRFIVSLAYAFETK----TDLCLVMTIMNGGDIRYHIYNVDE 281
Query: 193 -QSTITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILM-NGAVLKLIDLGXXXXXXX 250
E Q+ S L LH + I ++D++PEN+L+ + +++ DLG
Sbjct: 282 DNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341
Query: 251 XXLPDLEFA------SPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEE 299
+A +PE+L S D ++LGV LY +++ PF E+
Sbjct: 342 GQTKTKGYAGTPGFMAPELLLGEEY-DFSVDYFALGVTLYEMIAARGPFRARGEK 395
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 96/224 (42%), Gaps = 27/224 (12%)
Query: 84 LYTVPFETRWQQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQIT 143
L V +E R + H+ R+G G F V + +D+ TG A+K++ E +
Sbjct: 46 LKPVDYEYREEVHWMTHQ----PRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEEL 101
Query: 144 RAEYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICC 203
A L S + +P A+ E V I M+L+ G SL Q + + + E
Sbjct: 102 VACAGLSSPRI---VPLYGAVREGPWV----NIFMELLEGGSLGQLIKQMGCLPEDRALY 154
Query: 204 IIRQLHSALHCLHSQQIAHKDIRPENILM--NGAVLKLIDLG----------XXXXXXXX 251
+ Q L LH+++I H D++ +N+L+ +G+ L D G
Sbjct: 155 YLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGD 214
Query: 252 XLPDLE-FASPE-MLTSPATAGPSTDMWSLGVLLYILLSGVSPF 293
+P E +PE ++ P A D+WS ++ +L+G P+
Sbjct: 215 YIPGTETHMAPEVVMGKPCDA--KVDIWSSCCMMLHMLNGCHPW 256
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 59/114 (51%), Gaps = 8/114 (7%)
Query: 176 IVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILMNGA 235
IVM+ V G+SL + ++ + E+ + ++ AL LHS + + D++PENI++
Sbjct: 161 IVMEYVGGQSLKRSKGQKLPVAEA--IAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE 218
Query: 236 VLKLIDLGXXXXXXX--XXLPDLEFASPEML-TSPATAGPSTDMWSLGVLLYIL 286
LKLIDLG F +PE++ T P A TD++++G L L
Sbjct: 219 QLKLIDLGAVSRINSFGYLYGTPGFQAPEIVRTGPTVA---TDIYTVGRTLAAL 269
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 103/235 (43%), Gaps = 24/235 (10%)
Query: 84 LYTVPF-ETRWQQEQ--FEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQ 140
LY + F + +W + Q E + + LG G F V + + TG+L A K++ ++R +
Sbjct: 166 LYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKK 225
Query: 141 ----QITRAEYNLLSTLMHAHIPTALALFENAPVPGTD-TIVMQLVHGESLIQHLCR--- 192
Q E +L+ + I + FE TD +VM +++G + H+
Sbjct: 226 RKGYQGAMVEKKILAKVHSRFIVSLAYAFETK----TDLCLVMTIMNGGDIRYHIYNVDE 281
Query: 193 -QSTITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILM-NGAVLKLIDLGXXXXXXX 250
E Q+ S L LH + I ++D++PEN+L+ + +++ DLG
Sbjct: 282 DNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341
Query: 251 XXLPDLEFA------SPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEE 299
+A +PE+L S D ++LGV LY +++ PF E+
Sbjct: 342 GQTKTKGYAGTPGFMAPELLLGEEY-DFSVDYFALGVTLYEMIAARGPFRARGEK 395
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 103/235 (43%), Gaps = 24/235 (10%)
Query: 84 LYTVPF-ETRWQQEQ--FEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQ 140
LY + F + +W + Q E + + LG G F V + + TG+L A K++ ++R +
Sbjct: 166 LYFLRFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKK 225
Query: 141 ----QITRAEYNLLSTLMHAHIPTALALFENAPVPGTD-TIVMQLVHGESLIQHLCR--- 192
Q E +L+ + I + FE TD +VM +++G + H+
Sbjct: 226 RKGYQGAMVEKKILAKVHSRFIVSLAYAFETK----TDLCLVMTIMNGGDIRYHIYNVDE 281
Query: 193 -QSTITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILM-NGAVLKLIDLGXXXXXXX 250
E Q+ S L LH + I ++D++PEN+L+ + +++ DLG
Sbjct: 282 DNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341
Query: 251 XXLPDLEFA------SPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEE 299
+A +PE+L S D ++LGV LY +++ PF E+
Sbjct: 342 GQTKTKGYAGTPGFMAPELLLGEEY-DFSVDYFALGVTLYEMIAARGPFRARGEK 395
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 89/194 (45%), Gaps = 14/194 (7%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYN---LLSTLMHAH 157
RY+ L+ +G+G V A D + VA+K++ R Q Q + Y L+ + H +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKN 84
Query: 158 IPTALALF--ENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
I + L +F + D ++ + +L Q + Q + + ++ Q+ + L
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI--QMELDHERMSYLLYQMLCGIKHL 142
Query: 216 HSQQIAHKDIRPENILMNG-AVLKLIDLGXXXXXXXXXL--PDL---EFASPEMLTSPAT 269
HS I H+D++P NI++ LK++D G + P + + +PE++
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 270 AGPSTDMWSLGVLL 283
+ D+WS+G ++
Sbjct: 203 K-ENVDIWSVGCIM 215
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 91/216 (42%), Gaps = 24/216 (11%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQI-PRERQPQQITRAEYNLLSTLMHAHIPT 160
Y +++LG G F V G ALK+I E+Q ++ + E ++ H +I
Sbjct: 31 YLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILR 90
Query: 161 ALAL-FENAPVPGTDTIVMQLVHGESLIQHLCR----QSTITESYICCIIRQLHSALHCL 215
+A +++ +L + R + +TE I ++ + L +
Sbjct: 91 LVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAI 150
Query: 216 HSQQIAHKDIRPENILM-NGAVLKLIDLGXXXXX--------XXXXLPD-------LEFA 259
H++ AH+D++P NIL+ + L+DLG L D + +
Sbjct: 151 HAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYR 210
Query: 260 SPEMLT--SPATAGPSTDMWSLGVLLYILLSGVSPF 293
+PE+ + S TD+WSLG +LY ++ G P+
Sbjct: 211 APELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPY 246
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 89/194 (45%), Gaps = 14/194 (7%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYN---LLSTLMHAH 157
RY+ L+ +G+G V A D + VA+K++ R Q Q + Y L+ + H +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 158 IPTALALF--ENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
I + L +F + D ++ + +L Q + Q + + ++ Q+ + L
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI--QMELDHERMSYLLYQMLXGIKHL 142
Query: 216 HSQQIAHKDIRPENILMNG-AVLKLIDLGXXXXXXXXXL--PDL---EFASPEMLTSPAT 269
HS I H+D++P NI++ LK++D G + P + + +PE++
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 270 AGPSTDMWSLGVLL 283
+ D+WS+G ++
Sbjct: 203 K-ENVDIWSVGCIM 215
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 89/194 (45%), Gaps = 14/194 (7%)
Query: 101 RYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYN---LLSTLMHAH 157
RY+ L+ +G+G V A D + VA+K++ R Q Q + Y L+ + H +
Sbjct: 18 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 77
Query: 158 IPTALALF--ENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
I + L +F + D ++ + +L Q + Q + + ++ Q+ + L
Sbjct: 78 IISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVI--QMELDHERMSYLLYQMLXGIKHL 135
Query: 216 HSQQIAHKDIRPENILMNG-AVLKLIDLGXXXXXXXXXL--PDL---EFASPEMLTSPAT 269
HS I H+D++P NI++ LK++D G + P + + +PE++
Sbjct: 136 HSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 195
Query: 270 AGPSTDMWSLGVLL 283
+ D+WS+G ++
Sbjct: 196 K-ENVDIWSVGCIM 208
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 104/265 (39%), Gaps = 32/265 (12%)
Query: 101 RYEEL---ERLGNGRFCTVRKARDRGTGQL-------VALKQIPR-ERQPQQITRAEYNL 149
R E+L E LG G F + K R G V LK + + R + ++
Sbjct: 6 RNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASM 65
Query: 150 LSTLMHAHIPTALALFENAPVPGTDTIVMQ-LVHGESLIQHLCR-QSTITESYICCIIRQ 207
+S L H H L L G + I++Q V SL +L + ++ I + + +Q
Sbjct: 66 MSKLSHKH----LVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQ 121
Query: 208 LHSALHCLHSQQIAHKDIRPENILM---------NGAVLKLIDLGXXXXXXXXXL--PDL 256
L A+H L + H ++ +NIL+ N +KL D G + +
Sbjct: 122 LAWAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERI 181
Query: 257 EFASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQ 316
+ PE + +P +TD WS G L+ + SG L + + + + P +
Sbjct: 182 PWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQLPAPK 241
Query: 317 CGHISVPARELIGQLLNTHADKRPT 341
++ LI ++ D RP+
Sbjct: 242 AAELA----NLINNCMDYEPDHRPS 262
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 96/238 (40%), Gaps = 18/238 (7%)
Query: 93 WQQEQFEHRYEEL---ERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNL 149
W ++ +E E L ERLG G+ V G + VA+K + + AE NL
Sbjct: 3 WWEDAWEVPRETLKLVERLGAGQAGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANL 61
Query: 150 LSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTI--TESYICCIIRQ 207
+ L H + A+ P+ I+ + + SL+ L S I T + + + Q
Sbjct: 62 MKQLQHQRLVRLYAVVTQEPI----YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQ 117
Query: 208 LHSALHCLHSQQIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXXXLPDLEFAS-PEMLT 265
+ + + + H+D+R NIL++ + K+ D G E A P T
Sbjct: 118 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWT 177
Query: 266 SP-----ATAGPSTDMWSLGVLLY-ILLSGVSPFLDESEEETRAHISVADYSFPPEQC 317
+P T +D+WS G+LL I+ G P+ + E ++ P+ C
Sbjct: 178 APEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNC 235
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 98/226 (43%), Gaps = 23/226 (10%)
Query: 92 RWQQEQ--FEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQ----QITRA 145
+W + Q E + + LG G F V + + TG+L A K++ ++R + Q
Sbjct: 175 KWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMV 234
Query: 146 EYNLLSTLMHAHIPTALALFENAPVPGTD-TIVMQLVHGESLIQHLCR----QSTITESY 200
E +L+ + I + FE TD +VM +++G + H+ E
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETK----TDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPR 290
Query: 201 ICCIIRQLHSALHCLHSQQIAHKDIRPENILM-NGAVLKLIDLGXXXXXXXXXLPDLEFA 259
Q+ S L LH + I ++D++PEN+L+ + +++ DLG +A
Sbjct: 291 AIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYA 350
Query: 260 ------SPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEE 299
+PE+L S D ++LGV LY +++ PF E+
Sbjct: 351 GTPGFMAPELLLGEEY-DFSVDYFALGVTLYEMIAARGPFRARGEK 395
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 105/261 (40%), Gaps = 40/261 (15%)
Query: 96 EQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMH 155
E++ RYE +G G F V KA DR + VA+K I ++ + E LL LM+
Sbjct: 50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLE-LMN 108
Query: 156 AHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIR--------- 206
H T + + ++ L HLC + + ++R
Sbjct: 109 KH-DTEMKYY-----------IVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSL 156
Query: 207 --------QLHSALHCLHSQQ--IAHKDIRPENILM---NGAVLKLIDLGXXXXXXXXXL 253
Q+ +AL L + + I H D++PENIL+ + +K++D G
Sbjct: 157 NLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY 216
Query: 254 PDLE---FASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADY 310
++ + SPE+L + DMWSLG +L + +G P + E + + V
Sbjct: 217 QXIQSRFYRSPEVLLG-MPYDLAIDMWSLGCILVEMHTG-EPLFSGANEVDQMNKIVEVL 274
Query: 311 SFPPEQCGHISVPARELIGQL 331
PP + AR+ +L
Sbjct: 275 GIPPAHILDQAPKARKFFEKL 295
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 105/261 (40%), Gaps = 40/261 (15%)
Query: 96 EQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMH 155
E++ RYE +G G F V KA DR + VA+K I ++ + E LL LM+
Sbjct: 31 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLE-LMN 89
Query: 156 AHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIR--------- 206
H T + + ++ L HLC + + ++R
Sbjct: 90 KH-DTEMKYY-----------IVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSL 137
Query: 207 --------QLHSALHCLHSQQ--IAHKDIRPENILM---NGAVLKLIDLGXXXXXXXXXL 253
Q+ +AL L + + I H D++PENIL+ + +K++D G
Sbjct: 138 NLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIY 197
Query: 254 PDLE---FASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADY 310
++ + SPE+L + DMWSLG +L + +G P + E + + V
Sbjct: 198 QXIQSRFYRSPEVLLG-MPYDLAIDMWSLGCILVEMHTG-EPLFSGANEVDQMNKIVEVL 255
Query: 311 SFPPEQCGHISVPARELIGQL 331
PP + AR+ +L
Sbjct: 256 GIPPAHILDQAPKARKFFEKL 276
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 94/234 (40%), Gaps = 44/234 (18%)
Query: 95 QEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLM 154
+ ++ + ELE++G+G F +V K R G + A+K R ++P + E N L +
Sbjct: 2 KSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK---RSKKPLAGSVDEQNALREVY 58
Query: 155 -------HAHIPTALALFENAPVPGTDTIVMQ--LVHGESLIQHLCRQ----STITESYI 201
H+H+ + + D +++Q +G SL + S E+ +
Sbjct: 59 AHAVLGQHSHVVRYFSAWAE-----DDHMLIQNEYCNGGSLADAISENYRIMSYFKEAEL 113
Query: 202 CCIIRQLHSALHCLHSQQIAHKDIRPENILM--------------------NGAVLKLID 241
++ Q+ L +HS + H DI+P NI + N + K+ D
Sbjct: 114 KDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGD 173
Query: 242 LGXXXXXXXXXLP--DLEFASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPF 293
LG + D F + E+L T P D+++L L + +G P
Sbjct: 174 LGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALA-LTVVXAAGAEPL 226
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 94/234 (40%), Gaps = 44/234 (18%)
Query: 95 QEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLM 154
+ ++ + ELE++G+G F +V K R G + A+K R ++P + E N L +
Sbjct: 4 KSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK---RSKKPLAGSVDEQNALREVY 60
Query: 155 -------HAHIPTALALFENAPVPGTDTIVMQ--LVHGESLIQHLCRQ----STITESYI 201
H+H+ + + D +++Q +G SL + S E+ +
Sbjct: 61 AHAVLGQHSHVVRYFSAWAE-----DDHMLIQNEYCNGGSLADAISENYRIMSYFKEAEL 115
Query: 202 CCIIRQLHSALHCLHSQQIAHKDIRPENILM--------------------NGAVLKLID 241
++ Q+ L +HS + H DI+P NI + N + K+ D
Sbjct: 116 KDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGD 175
Query: 242 LGXXXXXXXXXLP--DLEFASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPF 293
LG + D F + E+L T P D+++L L + +G P
Sbjct: 176 LGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALA-LTVVCAAGAEPL 228
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 97/253 (38%), Gaps = 42/253 (16%)
Query: 93 WQQEQFEHRYEELERLGNGRFCTVRKARDRGTGQ-LVALKQIPRERQPQQITRAEYNLLS 151
W QE RYE + LG G F V + D G+ VALK I + ++ R E N+L
Sbjct: 16 WLQE----RYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLK 71
Query: 152 TLMHAHIPTALA---LFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIR-- 206
+ + + G I +L+ G++ + L + + Y +R
Sbjct: 72 KIKEKDKENKFLCVLMSDWFNFHGHMCIAFELL-GKNTFEFL--KENNFQPYPLPHVRHM 128
Query: 207 --QLHSALHCLHSQQIAHKDIRPENIL--------------------MNGAVLKLIDLGX 244
QL AL LH Q+ H D++PENIL + +++ D G
Sbjct: 129 AYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGS 188
Query: 245 XX---XXXXXXLPDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEET 301
+ + PE++ A P D+WS+G +L+ G + F E
Sbjct: 189 ATFDHEHHTTIVATRHYRPPEVILELGWAQP-CDVWSIGCILFEYYRGFTLF---QTHEN 244
Query: 302 RAHISVADYSFPP 314
R H+ + + P
Sbjct: 245 REHLVMMEKILGP 257
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 94/234 (40%), Gaps = 44/234 (18%)
Query: 95 QEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLM 154
+ ++ + ELE++G+G F +V K R G + A+K R ++P + E N L +
Sbjct: 6 KSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK---RSKKPLAGSVDEQNALREVY 62
Query: 155 -------HAHIPTALALFENAPVPGTDTIVMQ--LVHGESLIQHLCRQ----STITESYI 201
H+H+ + + D +++Q +G SL + S E+ +
Sbjct: 63 AHAVLGQHSHVVRYFSAWAE-----DDHMLIQNEYCNGGSLADAISENYRIMSYFKEAEL 117
Query: 202 CCIIRQLHSALHCLHSQQIAHKDIRPENILM--------------------NGAVLKLID 241
++ Q+ L +HS + H DI+P NI + N + K+ D
Sbjct: 118 KDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGD 177
Query: 242 LGXXXXXXXXXLP--DLEFASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPF 293
LG + D F + E+L T P D+++L L + +G P
Sbjct: 178 LGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALA-LTVVCAAGAEPL 230
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 94/234 (40%), Gaps = 44/234 (18%)
Query: 95 QEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLM 154
+ ++ + ELE++G+G F +V K R G + A+K R ++P + E N L +
Sbjct: 4 KSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK---RSKKPLAGSVDEQNALREVY 60
Query: 155 -------HAHIPTALALFENAPVPGTDTIVMQ--LVHGESLIQHLCRQ----STITESYI 201
H+H+ + + D +++Q +G SL + S E+ +
Sbjct: 61 AHAVLGQHSHVVRYFSAWAE-----DDHMLIQNEYCNGGSLADAISENYRIMSYFKEAEL 115
Query: 202 CCIIRQLHSALHCLHSQQIAHKDIRPENILM--------------------NGAVLKLID 241
++ Q+ L +HS + H DI+P NI + N + K+ D
Sbjct: 116 KDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGD 175
Query: 242 LGXXXXXXXXXLP--DLEFASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPF 293
LG + D F + E+L T P D+++L L + +G P
Sbjct: 176 LGHVTRISSPQVEEGDSRFLANEVLQENYTHLPKADIFALA-LTVVCAAGAEPL 228
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 92/278 (33%), Gaps = 92/278 (33%)
Query: 93 WQQEQFEHRYEELERLGNGRFCTVRKARDRGTGQ-LVALKQIPRERQPQQITRAEYNLLS 151
W QE RYE + LG G F V + D G+ VALK I + ++ R E N+L
Sbjct: 25 WLQE----RYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLK 80
Query: 152 TL-------------------MHAHIPTALAL-------------FENAPVPGTDTIVMQ 179
+ H H+ A L F+ P+P + Q
Sbjct: 81 KIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQ 140
Query: 180 LVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQIAHKDIRPENIL-------- 231
L H AL LH Q+ H D++PENIL
Sbjct: 141 LCH----------------------------ALRFLHENQLTHTDLKPENILFVNSEFET 172
Query: 232 ------------MNGAVLKLIDLGXXX---XXXXXXLPDLEFASPEMLTSPATAGPSTDM 276
+ +++ D G + + PE++ A P D+
Sbjct: 173 LYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQP-CDV 231
Query: 277 WSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPP 314
WS+G +L+ G + F E R H+ + + P
Sbjct: 232 WSIGCILFEYYRGFTLF---QTHENREHLVMMEKILGP 266
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 92/278 (33%), Gaps = 92/278 (33%)
Query: 93 WQQEQFEHRYEELERLGNGRFCTVRKARDRGTGQ-LVALKQIPRERQPQQITRAEYNLLS 151
W QE RYE + LG G F V + D G+ VALK I + ++ R E N+L
Sbjct: 48 WLQE----RYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLK 103
Query: 152 TL-------------------MHAHIPTALAL-------------FENAPVPGTDTIVMQ 179
+ H H+ A L F+ P+P + Q
Sbjct: 104 KIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQ 163
Query: 180 LVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQIAHKDIRPENIL-------- 231
L H AL LH Q+ H D++PENIL
Sbjct: 164 LCH----------------------------ALRFLHENQLTHTDLKPENILFVNSEFET 195
Query: 232 ------------MNGAVLKLIDLGXXX---XXXXXXLPDLEFASPEMLTSPATAGPSTDM 276
+ +++ D G + + PE++ A P D+
Sbjct: 196 LYNEHKSCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQP-CDV 254
Query: 277 WSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPP 314
WS+G +L+ G + F E R H+ + + P
Sbjct: 255 WSIGCILFEYYRGFTLF---QTHENREHLVMMEKILGP 289
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 104/261 (39%), Gaps = 40/261 (15%)
Query: 96 EQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMH 155
E++ RYE +G G F V KA DR + VA+K I ++ + E LL LM+
Sbjct: 50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLE-LMN 108
Query: 156 AHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIR--------- 206
H T + + ++ L HLC + + ++R
Sbjct: 109 KH-DTEMKYY-----------IVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSL 156
Query: 207 --------QLHSALHCLHSQQ--IAHKDIRPENILM---NGAVLKLIDLGXXXXXXXXXL 253
Q+ +AL L + + I H D++PENIL+ +K++D G
Sbjct: 157 NLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRIY 216
Query: 254 PDLE---FASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADY 310
++ + SPE+L + DMWSLG +L + +G P + E + + V
Sbjct: 217 QXIQSRFYRSPEVLLG-MPYDLAIDMWSLGCILVEMHTG-EPLFSGANEVDQMNKIVEVL 274
Query: 311 SFPPEQCGHISVPARELIGQL 331
PP + AR+ +L
Sbjct: 275 GIPPAHILDQAPKARKFFEKL 295
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 17/214 (7%)
Query: 88 PFETRWQQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEY 147
P + W E + L+ +G G F V RG VA+K I + Q AE
Sbjct: 2 PLGSGWALNMKELKL--LQTIGKGEFGDVMLGDYRGNK--VAVKCIKNDATAQAFL-AEA 56
Query: 148 NLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQ 207
++++ L H+++ L + G IV + + SL+ +L + C +
Sbjct: 57 SVMTQLRHSNLVQLLGVI--VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFS 114
Query: 208 LH--SALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXX----XLPDLEFAS 260
L A+ L H+D+ N+L++ V K+ D G LP +++ +
Sbjct: 115 LDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP-VKWTA 173
Query: 261 PEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPF 293
PE L A + S D+WS G+LL+ + S G P+
Sbjct: 174 PEALREAAFSTKS-DVWSFGILLWEIYSFGRVPY 206
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 31/217 (14%)
Query: 97 QFEHRY-EELERLGNGRFCTVRKAR----DRGTGQLVALKQIPR--ERQPQQITRAEYNL 149
QFE R+ + L++LG G F +V R TG++VA+K++ E + R E +
Sbjct: 9 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER-EIEI 67
Query: 150 LSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR-QSTITESYICCIIRQL 208
L +L H +I + +A I+ L +G SL +L + + I + Q+
Sbjct: 68 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG-SLRDYLQKHKERIDHIKLLQYTSQI 126
Query: 209 HSALHCLHSQQIAHKDIRPENILM-NGAVLKLIDLGXXXXXXXXXLP-DLE--------- 257
+ L +++ H+D+ NIL+ N +K+ D G LP D E
Sbjct: 127 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV-----LPQDKEXXKVKEPGE 181
Query: 258 ----FASPEMLTSPATAGPSTDMWSLGVLLYILLSGV 290
+ +PE LT + ++D+WS GV+LY L + +
Sbjct: 182 SPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFTYI 217
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 49/130 (37%), Gaps = 36/130 (27%)
Query: 208 LHSALHCLHSQQIAHKDIRPENILMNGAVLK--LIDLGXXXXXXXXXLPDLEFA------ 259
L AL +H I H+D++P N L N + K L+D G + L+F
Sbjct: 126 LFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQ 185
Query: 260 ----------------------------SPEMLTSPATAGPSTDMWSLGVLLYILLSGVS 291
+PE+LT + DMWS GV+ LLSG
Sbjct: 186 ERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRY 245
Query: 292 PFLDESEEET 301
PF S++ T
Sbjct: 246 PFYKASDDLT 255
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 31/217 (14%)
Query: 97 QFEHRY-EELERLGNGRFCTVRKAR----DRGTGQLVALKQIPR--ERQPQQITRAEYNL 149
QFE R+ + L++LG G F +V R TG++VA+K++ E + R E +
Sbjct: 11 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER-EIEI 69
Query: 150 LSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR-QSTITESYICCIIRQL 208
L +L H +I + +A I+ L +G SL +L + + I + Q+
Sbjct: 70 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG-SLRDYLQKHKERIDHIKLLQYTSQI 128
Query: 209 HSALHCLHSQQIAHKDIRPENILM-NGAVLKLIDLGXXXXXXXXXLP-DLE--------- 257
+ L +++ H+D+ NIL+ N +K+ D G LP D E
Sbjct: 129 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV-----LPQDKEXXKVKEPGE 183
Query: 258 ----FASPEMLTSPATAGPSTDMWSLGVLLYILLSGV 290
+ +PE LT + ++D+WS GV+LY L + +
Sbjct: 184 SPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFTYI 219
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 103/228 (45%), Gaps = 32/228 (14%)
Query: 86 TVPFETRWQQEQFEHRY-EELERLGNGRFCTVRKAR----DRGTGQLVALKQIPR--ERQ 138
+ FE R QFE R+ + L++LG G F +V R TG++VA+K++ E
Sbjct: 2 AMAFEDR-DPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEH 60
Query: 139 PQQITRAEYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR-QSTIT 197
+ R E +L +L H +I + +A I+ L +G SL +L + + I
Sbjct: 61 LRDFER-EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG-SLRDYLQKHKERID 118
Query: 198 ESYICCIIRQLHSALHCLHSQQIAHKDIRPENILM-NGAVLKLIDLGXXXXXXXXXLP-D 255
+ Q+ + L +++ H+D+ NIL+ N +K+ D G LP D
Sbjct: 119 HIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV-----LPQD 173
Query: 256 LE-------------FASPEMLTSPATAGPSTDMWSLGVLLYILLSGV 290
E + +PE LT + ++D+WS GV+LY L + +
Sbjct: 174 KEXXKVKEPGESPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFTYI 220
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 31/217 (14%)
Query: 97 QFEHRY-EELERLGNGRFCTVRKAR----DRGTGQLVALKQIPR--ERQPQQITRAEYNL 149
QFE R+ + L++LG G F +V R TG++VA+K++ E + R E +
Sbjct: 5 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER-EIEI 63
Query: 150 LSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR-QSTITESYICCIIRQL 208
L +L H +I + +A I+ L +G SL +L + + I + Q+
Sbjct: 64 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG-SLRDYLQKHKERIDHIKLLQYTSQI 122
Query: 209 HSALHCLHSQQIAHKDIRPENILM-NGAVLKLIDLGXXXXXXXXXLP-DLE--------- 257
+ L +++ H+D+ NIL+ N +K+ D G LP D E
Sbjct: 123 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV-----LPQDKEXXKVKEPGE 177
Query: 258 ----FASPEMLTSPATAGPSTDMWSLGVLLYILLSGV 290
+ +PE LT + ++D+WS GV+LY L + +
Sbjct: 178 SPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFTYI 213
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 31/217 (14%)
Query: 97 QFEHRY-EELERLGNGRFCTVRKAR----DRGTGQLVALKQIPR--ERQPQQITRAEYNL 149
QFE R+ + L++LG G F +V R TG++VA+K++ E + R E +
Sbjct: 37 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER-EIEI 95
Query: 150 LSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR-QSTITESYICCIIRQL 208
L +L H +I + +A I+ L +G SL +L + + I + Q+
Sbjct: 96 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG-SLRDYLQKHKERIDHIKLLQYTSQI 154
Query: 209 HSALHCLHSQQIAHKDIRPENILM-NGAVLKLIDLGXXXXXXXXXLP-DLE--------- 257
+ L +++ H+D+ NIL+ N +K+ D G LP D E
Sbjct: 155 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV-----LPQDKEXXKVKEPGE 209
Query: 258 ----FASPEMLTSPATAGPSTDMWSLGVLLYILLSGV 290
+ +PE LT + ++D+WS GV+LY L + +
Sbjct: 210 SPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFTYI 245
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 31/217 (14%)
Query: 97 QFEHRY-EELERLGNGRFCTVRKAR----DRGTGQLVALKQIPR--ERQPQQITRAEYNL 149
QFE R+ + L++LG G F +V R TG++VA+K++ E + R E +
Sbjct: 13 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER-EIEI 71
Query: 150 LSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR-QSTITESYICCIIRQL 208
L +L H +I + +A I+ L +G SL +L + + I + Q+
Sbjct: 72 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG-SLRDYLQKHKERIDHIKLLQYTSQI 130
Query: 209 HSALHCLHSQQIAHKDIRPENILM-NGAVLKLIDLGXXXXXXXXXLP-DLE--------- 257
+ L +++ H+D+ NIL+ N +K+ D G LP D E
Sbjct: 131 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV-----LPQDKEXXKVKEPGE 185
Query: 258 ----FASPEMLTSPATAGPSTDMWSLGVLLYILLSGV 290
+ +PE LT + ++D+WS GV+LY L + +
Sbjct: 186 SPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFTYI 221
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 31/217 (14%)
Query: 97 QFEHRY-EELERLGNGRFCTVRKAR----DRGTGQLVALKQIPR--ERQPQQITRAEYNL 149
QFE R+ + L++LG G F +V R TG++VA+K++ E + R E +
Sbjct: 6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER-EIEI 64
Query: 150 LSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR-QSTITESYICCIIRQL 208
L +L H +I + +A I+ L +G SL +L + + I + Q+
Sbjct: 65 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG-SLRDYLQKHKERIDHIKLLQYTSQI 123
Query: 209 HSALHCLHSQQIAHKDIRPENILM-NGAVLKLIDLGXXXXXXXXXLP-DLE--------- 257
+ L +++ H+D+ NIL+ N +K+ D G LP D E
Sbjct: 124 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV-----LPQDKEXXKVKEPGE 178
Query: 258 ----FASPEMLTSPATAGPSTDMWSLGVLLYILLSGV 290
+ +PE LT + ++D+WS GV+LY L + +
Sbjct: 179 SPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFTYI 214
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 31/217 (14%)
Query: 97 QFEHRY-EELERLGNGRFCTVRKAR----DRGTGQLVALKQIPR--ERQPQQITRAEYNL 149
QFE R+ + L++LG G F +V R TG++VA+K++ E + R E +
Sbjct: 10 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER-EIEI 68
Query: 150 LSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR-QSTITESYICCIIRQL 208
L +L H +I + +A I+ L +G SL +L + + I + Q+
Sbjct: 69 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG-SLRDYLQKHKERIDHIKLLQYTSQI 127
Query: 209 HSALHCLHSQQIAHKDIRPENILM-NGAVLKLIDLGXXXXXXXXXLP-DLE--------- 257
+ L +++ H+D+ NIL+ N +K+ D G LP D E
Sbjct: 128 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV-----LPQDKEXXKVKEPGE 182
Query: 258 ----FASPEMLTSPATAGPSTDMWSLGVLLYILLSGV 290
+ +PE LT + ++D+WS GV+LY L + +
Sbjct: 183 SPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFTYI 218
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 18/149 (12%)
Query: 106 ERLGNGRFCTVRKARDRGTGQLVALKQIP-RERQPQQITRAEYNLLSTLMHAH--IPTAL 162
+++G G F +R ++ T + VA+K P + R PQ EY L A +P
Sbjct: 6 KKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQ--LHLEYRFYKQLGSAGEGLP--- 60
Query: 163 ALFENAPVPGTDTIVMQLVHGESL--IQHLCRQSTITESYICCIIRQLHSALHCLHSQQI 220
++ P + +V++L+ G SL + LC T T + I QL S + +HS+ +
Sbjct: 61 QVYYFGPXGKYNAMVLELL-GPSLEDLFDLC-DRTFTLKTVLMIAIQLLSRMEYVHSKNL 118
Query: 221 AHKDIRPENILMNGA------VLKLIDLG 243
++D++PEN L+ V+ +ID G
Sbjct: 119 IYRDVKPENFLIGRQGNKKEHVIHIIDFG 147
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 31/217 (14%)
Query: 97 QFEHRY-EELERLGNGRFCTVRKAR----DRGTGQLVALKQIPR--ERQPQQITRAEYNL 149
QFE R+ + L++LG G F +V R TG++VA+K++ E + R E +
Sbjct: 4 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER-EIEI 62
Query: 150 LSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR-QSTITESYICCIIRQL 208
L +L H +I + +A I+ L +G SL +L + + I + Q+
Sbjct: 63 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG-SLRDYLQKHKERIDHIKLLQYTSQI 121
Query: 209 HSALHCLHSQQIAHKDIRPENILM-NGAVLKLIDLGXXXXXXXXXLP-DLE--------- 257
+ L +++ H+D+ NIL+ N +K+ D G LP D E
Sbjct: 122 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV-----LPQDKEXXKVKEPGE 176
Query: 258 ----FASPEMLTSPATAGPSTDMWSLGVLLYILLSGV 290
+ +PE LT + ++D+WS GV+LY L + +
Sbjct: 177 SPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFTYI 212
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 31/217 (14%)
Query: 97 QFEHRY-EELERLGNGRFCTVRKAR----DRGTGQLVALKQIPR--ERQPQQITRAEYNL 149
QFE R+ + L++LG G F +V R TG++VA+K++ E + R E +
Sbjct: 6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER-EIEI 64
Query: 150 LSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR-QSTITESYICCIIRQL 208
L +L H +I + +A I+ L +G SL +L + + I + Q+
Sbjct: 65 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG-SLRDYLQKHKERIDHIKLLQYTSQI 123
Query: 209 HSALHCLHSQQIAHKDIRPENILM-NGAVLKLIDLGXXXXXXXXXLP-DLE--------- 257
+ L +++ H+D+ NIL+ N +K+ D G LP D E
Sbjct: 124 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV-----LPQDKEXXKVKEPGE 178
Query: 258 ----FASPEMLTSPATAGPSTDMWSLGVLLYILLSGV 290
+ +PE LT + ++D+WS GV+LY L + +
Sbjct: 179 SPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFTYI 214
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 104/262 (39%), Gaps = 28/262 (10%)
Query: 106 ERLGNGRFCTVRKARDRGTGQLV-ALKQIPRERQPQQI--TRAEYNLLSTLMHAHIPTAL 162
E +G G F V +A G V A + P E Q I R E L + L H +I
Sbjct: 13 EIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALR 72
Query: 163 ALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQIA- 221
+ P +VM+ G L + L + + + + Q+ ++ LH + I
Sbjct: 73 GVCLKEP---NLCLVMEFARGGPLNRVLSGKRIPPDILVNWAV-QIARGMNYLHDEAIVP 128
Query: 222 --HKDIRPENILM-----NG----AVLKLIDLGXXX----XXXXXXLPDLEFASPEMLTS 266
H+D++ NIL+ NG +LK+ D G + +PE++ +
Sbjct: 129 IIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRA 188
Query: 267 PATAGPSTDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFP-PEQCGHISVPAR 325
+ +D+WS GVLL+ LL+G PF +++ + P P C P
Sbjct: 189 -SMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPE---PFA 244
Query: 326 ELIGQLLNTHADKRPTAGQLLQ 347
+L+ N RP+ +L
Sbjct: 245 KLMEDCWNPDPHSRPSFTNILD 266
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 31/217 (14%)
Query: 97 QFEHRY-EELERLGNGRFCTVRKAR----DRGTGQLVALKQIPR--ERQPQQITRAEYNL 149
QFE R+ + L +LG G F +V R TG++VA+K++ E + R E +
Sbjct: 9 QFEERHLKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER-EIEI 67
Query: 150 LSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR-QSTITESYICCIIRQL 208
L +L H +I + +A I+ L +G SL ++L + + I + Q+
Sbjct: 68 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYG-SLREYLQKHKERIDHIKLLQYTSQI 126
Query: 209 HSALHCLHSQQIAHKDIRPENILM-NGAVLKLIDLGXXXXXXXXXLP-DLE--------- 257
+ L +++ H+D+ NIL+ N +K+ D G LP D E
Sbjct: 127 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV-----LPQDKEXXKVKEPGE 181
Query: 258 ----FASPEMLTSPATAGPSTDMWSLGVLLYILLSGV 290
+ +PE LT + ++D+WS GV+LY L + +
Sbjct: 182 SPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFTYI 217
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 31/217 (14%)
Query: 97 QFEHRY-EELERLGNGRFCTVRKAR----DRGTGQLVALKQIPR--ERQPQQITRAEYNL 149
QFE R+ + L++LG G F +V R TG++VA+K++ E + R E +
Sbjct: 24 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER-EIEI 82
Query: 150 LSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR-QSTITESYICCIIRQL 208
L +L H +I + +A I+ L +G SL +L + + I + Q+
Sbjct: 83 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG-SLRDYLQKHKERIDHIKLLQYTSQI 141
Query: 209 HSALHCLHSQQIAHKDIRPENILM-NGAVLKLIDLGXXXXXXXXXLP-DLE--------- 257
+ L +++ H+D+ NIL+ N +K+ D G LP D E
Sbjct: 142 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV-----LPQDKEXXKVKEPGE 196
Query: 258 ----FASPEMLTSPATAGPSTDMWSLGVLLYILLSGV 290
+ +PE LT + ++D+WS GV+LY L + +
Sbjct: 197 SPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFTYI 232
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 31/217 (14%)
Query: 97 QFEHRY-EELERLGNGRFCTVRKAR----DRGTGQLVALKQIPR--ERQPQQITRAEYNL 149
QFE R+ + L++LG G F +V R TG++VA+K++ E + R E +
Sbjct: 24 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER-EIEI 82
Query: 150 LSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR-QSTITESYICCIIRQL 208
L +L H +I + +A I+ L +G SL +L + + I + Q+
Sbjct: 83 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG-SLRDYLQKHKERIDHIKLLQYTSQI 141
Query: 209 HSALHCLHSQQIAHKDIRPENILM-NGAVLKLIDLGXXXXXXXXXLP-DLE--------- 257
+ L +++ H+D+ NIL+ N +K+ D G LP D E
Sbjct: 142 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV-----LPQDKEXXKVKEPGE 196
Query: 258 ----FASPEMLTSPATAGPSTDMWSLGVLLYILLSGV 290
+ +PE LT + ++D+WS GV+LY L + +
Sbjct: 197 SPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFTYI 232
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 99/217 (45%), Gaps = 31/217 (14%)
Query: 97 QFEHRY-EELERLGNGRFCTVRKAR----DRGTGQLVALKQIPR--ERQPQQITRAEYNL 149
QFE R+ + L++LG G F +V R TG++VA+K++ E + R E +
Sbjct: 7 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER-EIEI 65
Query: 150 LSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR-QSTITESYICCIIRQL 208
L +L H +I + +A I+ L +G SL +L + + I + Q+
Sbjct: 66 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG-SLRDYLQKHKERIDHIKLLQYTSQI 124
Query: 209 HSALHCLHSQQIAHKDIRPENILM-NGAVLKLIDLGXXXXXXXXXLP-DLEFA------- 259
+ L +++ H+++ NIL+ N +K+ D G LP D E+
Sbjct: 125 CKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKV-----LPQDKEYYKVKEPGE 179
Query: 260 ------SPEMLTSPATAGPSTDMWSLGVLLYILLSGV 290
+PE LT + ++D+WS GV+LY L + +
Sbjct: 180 SPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFTYI 215
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 31/217 (14%)
Query: 97 QFEHRY-EELERLGNGRFCTVRKAR----DRGTGQLVALKQIPR--ERQPQQITRAEYNL 149
QFE R+ + L++LG G F +V R TG++VA+K++ E + R E +
Sbjct: 9 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFER-EIEI 67
Query: 150 LSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHL-CRQSTITESYICCIIRQL 208
L +L H +I + +A I+ L +G SL +L I + Q+
Sbjct: 68 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG-SLRDYLQAHAERIDHIKLLQYTSQI 126
Query: 209 HSALHCLHSQQIAHKDIRPENILM-NGAVLKLIDLGXXXXXXXXXLP-DLE--------- 257
+ L +++ H+D+ NIL+ N +K+ D G LP D E
Sbjct: 127 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKV-----LPQDKEXXKVKEPGE 181
Query: 258 ----FASPEMLTSPATAGPSTDMWSLGVLLYILLSGV 290
+ +PE LT + ++D+WS GV+LY L + +
Sbjct: 182 SPIFWYAPESLTE-SKFSVASDVWSFGVVLYELFTYI 217
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 96/229 (41%), Gaps = 26/229 (11%)
Query: 106 ERLGNGRFCTVRKARDRGTGQ---LVALKQIP---RERQPQQITRAEYNLLSTLMHAHIP 159
E +G G F V + R + G+ VA+K + ERQ ++ +E +++ H +I
Sbjct: 22 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFL-SEASIMGQFEHPNII 80
Query: 160 TALALFENA-PVPGTDTIVMQLVHGESLIQHL-CRQSTITESYICCIIRQLHSALHCLHS 217
+ N+ PV I+ + + +L L T + ++R + S + L
Sbjct: 81 RLEGVVTNSMPV----MILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAE 136
Query: 218 QQIAHKDIRPENILMNGA-VLKLIDLGXXXXXXXXXLPDLEFAS-----PEMLTSPATAG 271
H+D+ NIL+N V K+ D G E +S P T+P
Sbjct: 137 MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIA 196
Query: 272 -----PSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPP 314
++D WS G++++ ++S G P+ D S ++ I DY PP
Sbjct: 197 FRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIE-QDYRLPP 244
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 85/197 (43%), Gaps = 15/197 (7%)
Query: 105 LERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTALAL 164
L+ +G G F V RG VA+K I + Q AE ++++ L H+++ L +
Sbjct: 198 LQTIGKGEFGDVMLGDYRGNK--VAVKCIKNDATAQAFL-AEASVMTQLRHSNLVQLLGV 254
Query: 165 FENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLH--SALHCLHSQQIAH 222
G IV + + SL+ +L + C + L A+ L H
Sbjct: 255 I--VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVH 312
Query: 223 KDIRPENILMN-GAVLKLIDLGXXXXXXXX----XLPDLEFASPEMLTSPATAGPSTDMW 277
+D+ N+L++ V K+ D G LP +++ +PE L + S D+W
Sbjct: 313 RDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP-VKWTAPEALREKKFSTKS-DVW 370
Query: 278 SLGVLLYILLS-GVSPF 293
S G+LL+ + S G P+
Sbjct: 371 SFGILLWEIYSFGRVPY 387
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 99/233 (42%), Gaps = 18/233 (7%)
Query: 93 WQQEQFEHRYEELE---RLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNL 149
W+++ +E E L+ +LG G+F V A + VA+K + + AE N+
Sbjct: 172 WEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTK-VAVKTMKPGSMSVEAFLAEANV 230
Query: 150 LSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESY--ICCIIRQ 207
+ TL H + A+ P+ I+ + + SL+ L + + Q
Sbjct: 231 MKTLQHDKLVKLHAVVTKEPI----YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQ 286
Query: 208 LHSALHCLHSQQIAHKDIRPENILMNGA-VLKLIDLGXXXXXXXXXLPDLEFASPEMLTS 266
+ + + + H+D+R NIL++ + V K+ D G P +++ +PE +
Sbjct: 287 IAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFG--LARVGAKFP-IKWTAPEAINF 343
Query: 267 PATAGPSTDMWSLGVLLY-ILLSGVSPFLDESEEETRAHISVADYSFP-PEQC 317
+ +D+WS G+LL I+ G P+ S E + Y P PE C
Sbjct: 344 -GSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG-YRMPRPENC 394
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 85/197 (43%), Gaps = 15/197 (7%)
Query: 105 LERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTALAL 164
L+ +G G F V RG VA+K I + Q AE ++++ L H+++ L +
Sbjct: 26 LQTIGKGEFGDVMLGDYRGNK--VAVKCIKNDATAQAFL-AEASVMTQLRHSNLVQLLGV 82
Query: 165 FENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLH--SALHCLHSQQIAH 222
G IV + + SL+ +L + C + L A+ L H
Sbjct: 83 I--VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVH 140
Query: 223 KDIRPENILMN-GAVLKLIDLGXXXXXXXX----XLPDLEFASPEMLTSPATAGPSTDMW 277
+D+ N+L++ V K+ D G LP +++ +PE L + S D+W
Sbjct: 141 RDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP-VKWTAPEALREKKFSTKS-DVW 198
Query: 278 SLGVLLYILLS-GVSPF 293
S G+LL+ + S G P+
Sbjct: 199 SFGILLWEIYSFGRVPY 215
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 90/210 (42%), Gaps = 25/210 (11%)
Query: 107 RLGNGRFCTVRKARDRGT----GQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTAL 162
++G G F V K T +L A+ I E QQ + E +++ H ++ L
Sbjct: 38 KMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQ-EIKVMAKCQHENLVELL 96
Query: 163 ALFENAPVPGTDT--IVMQLVHGESLIQHLCRQST--ITESYICCIIRQLHSALHCLHSQ 218
+ G D + + + +G L + C T ++ C I + + ++ LH
Sbjct: 97 GFSSD----GDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN 152
Query: 219 QIAHKDIRPENILMNGA-VLKLIDLG--------XXXXXXXXXLPDLEFASPEMLTSPAT 269
H+DI+ NIL++ A K+ D G + + +PE L T
Sbjct: 153 HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRGEIT 212
Query: 270 AGPSTDMWSLGVLLYILLSGVSPFLDESEE 299
P +D++S GV+L +++G+ P +DE E
Sbjct: 213 --PKSDIYSFGVVLLEIITGL-PAVDEHRE 239
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 89/210 (42%), Gaps = 25/210 (11%)
Query: 107 RLGNGRFCTVRKARDRGT----GQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTAL 162
++G G F V K T +L A+ I E QQ + E +++ H ++ L
Sbjct: 38 KMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQ-EIKVMAKCQHENLVELL 96
Query: 163 ALFENAPVPGTDT--IVMQLVHGESLIQHLCRQST--ITESYICCIIRQLHSALHCLHSQ 218
+ G D + + + +G L + C T ++ C I + + ++ LH
Sbjct: 97 GFSSD----GDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN 152
Query: 219 QIAHKDIRPENILMNGA-VLKLIDLGXXXXXXXXX--------LPDLEFASPEMLTSPAT 269
H+DI+ NIL++ A K+ D G + + +PE L T
Sbjct: 153 HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRGEIT 212
Query: 270 AGPSTDMWSLGVLLYILLSGVSPFLDESEE 299
P +D++S GV+L +++G+ P +DE E
Sbjct: 213 --PKSDIYSFGVVLLEIITGL-PAVDEHRE 239
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 89/210 (42%), Gaps = 25/210 (11%)
Query: 107 RLGNGRFCTVRKARDRGT----GQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTAL 162
++G G F V K T +L A+ I E QQ + E +++ H ++ L
Sbjct: 32 KMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQ-EIKVMAKCQHENLVELL 90
Query: 163 ALFENAPVPGTDT--IVMQLVHGESLIQHLCRQST--ITESYICCIIRQLHSALHCLHSQ 218
+ G D + + + +G L + C T ++ C I + + ++ LH
Sbjct: 91 GFSSD----GDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN 146
Query: 219 QIAHKDIRPENILMNGA-VLKLIDLGXXXXXXXXX--------LPDLEFASPEMLTSPAT 269
H+DI+ NIL++ A K+ D G + + +PE L T
Sbjct: 147 HHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRGEIT 206
Query: 270 AGPSTDMWSLGVLLYILLSGVSPFLDESEE 299
P +D++S GV+L +++G+ P +DE E
Sbjct: 207 --PKSDIYSFGVVLLEIITGL-PAVDEHRE 233
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 85/197 (43%), Gaps = 15/197 (7%)
Query: 105 LERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTALAL 164
L+ +G G F V RG VA+K I + Q AE ++++ L H+++ L +
Sbjct: 11 LQTIGKGEFGDVMLGDYRGNK--VAVKCIKNDATAQAFL-AEASVMTQLRHSNLVQLLGV 67
Query: 165 FENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLH--SALHCLHSQQIAH 222
G IV + + SL+ +L + C + L A+ L H
Sbjct: 68 I--VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVH 125
Query: 223 KDIRPENILMN-GAVLKLIDLGXXXXXXXX----XLPDLEFASPEMLTSPATAGPSTDMW 277
+D+ N+L++ V K+ D G LP +++ +PE L + S D+W
Sbjct: 126 RDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLP-VKWTAPEALREKKFSTKS-DVW 183
Query: 278 SLGVLLYILLS-GVSPF 293
S G+LL+ + S G P+
Sbjct: 184 SFGILLWEIYSFGRVPY 200
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 71/148 (47%), Gaps = 17/148 (11%)
Query: 106 ERLGNGRFCTVRKARDRGTGQLVALKQIP-RERQPQQITRAEYNLLSTLMHAH-IPTALA 163
+++G G F +R ++ T + VA+K P + R PQ EY L IP
Sbjct: 15 KKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQ--LHLEYRFYKQLGSGDGIPQ--- 69
Query: 164 LFENAPVPGTDTIVMQLVHGESL--IQHLCRQSTITESYICCIIRQLHSALHCLHSQQIA 221
++ P + +V++L+ G SL + LC T + + I QL S + +HS+ +
Sbjct: 70 VYYFGPCGKYNAMVLELL-GPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSKNLI 127
Query: 222 HKDIRPENILMN------GAVLKLIDLG 243
++D++PEN L+ V+ +ID G
Sbjct: 128 YRDVKPENFLIGRPGNKTQQVIHIIDFG 155
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 17/150 (11%)
Query: 155 HAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHL-CRQSTITESYICCIIRQLHSALH 213
H HI + + PV I+M+L L L R+ ++ + + QL +AL
Sbjct: 450 HPHIVKLIGVITENPV----WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALA 505
Query: 214 CLHSQQIAHKDIRPENILMNGA-VLKLIDLG--------XXXXXXXXXLPDLEFASPEML 264
L S++ H+DI N+L++ +KL D G LP +++ +PE +
Sbjct: 506 YLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLP-IKWMAPESI 564
Query: 265 TSPATAGPSTDMWSLGVLLY-ILLSGVSPF 293
S D+W GV ++ IL+ GV PF
Sbjct: 565 NFRRFTSAS-DVWMFGVCMWEILMHGVKPF 593
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 17/150 (11%)
Query: 155 HAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHL-CRQSTITESYICCIIRQLHSALH 213
H HI + + PV I+M+L L L R+ ++ + + QL +AL
Sbjct: 70 HPHIVKLIGVITENPV----WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALA 125
Query: 214 CLHSQQIAHKDIRPENILMNGA-VLKLIDLG--------XXXXXXXXXLPDLEFASPEML 264
L S++ H+DI N+L++ +KL D G LP +++ +PE +
Sbjct: 126 YLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLP-IKWMAPESI 184
Query: 265 TSPATAGPSTDMWSLGVLLY-ILLSGVSPF 293
S D+W GV ++ IL+ GV PF
Sbjct: 185 NFRRFTSAS-DVWMFGVCMWEILMHGVKPF 213
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 17/150 (11%)
Query: 155 HAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHL-CRQSTITESYICCIIRQLHSALH 213
H HI + + PV I+M+L L L R+ ++ + + QL +AL
Sbjct: 72 HPHIVKLIGVITENPV----WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 127
Query: 214 CLHSQQIAHKDIRPENILMNGA-VLKLIDLG--------XXXXXXXXXLPDLEFASPEML 264
L S++ H+DI N+L++ +KL D G LP +++ +PE +
Sbjct: 128 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP-IKWMAPESI 186
Query: 265 TSPATAGPSTDMWSLGVLLY-ILLSGVSPF 293
S D+W GV ++ IL+ GV PF
Sbjct: 187 NFRRFTSAS-DVWMFGVCMWEILMHGVKPF 215
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 97/239 (40%), Gaps = 20/239 (8%)
Query: 93 WQQEQFEHRYEELE---RLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNL 149
W+++ +E E L+ +LG G+F V A + VA+K + + AE N+
Sbjct: 5 WEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTK-VAVKTMKPGSMSVEAFLAEANV 63
Query: 150 LSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESY--ICCIIRQ 207
+ TL H + A+ P+ I+ + + SL+ L + + Q
Sbjct: 64 MKTLQHDKLVKLHAVVTKEPI----YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQ 119
Query: 208 LHSALHCLHSQQIAHKDIRPENILMNGA-VLKLIDLGXXXXXXXXXLPDLEFAS-PEMLT 265
+ + + + H+D+R NIL++ + V K+ D G E A P T
Sbjct: 120 IAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWT 179
Query: 266 SP-----ATAGPSTDMWSLGVLLY-ILLSGVSPFLDESEEETRAHISVADYSFP-PEQC 317
+P + +D+WS G+LL I+ G P+ S E + Y P PE C
Sbjct: 180 APEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG-YRMPRPENC 237
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 17/150 (11%)
Query: 155 HAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHL-CRQSTITESYICCIIRQLHSALH 213
H HI + + PV I+M+L L L R+ ++ + + QL +AL
Sbjct: 73 HPHIVKLIGVITENPV----WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 128
Query: 214 CLHSQQIAHKDIRPENILMNGA-VLKLIDLG--------XXXXXXXXXLPDLEFASPEML 264
L S++ H+DI N+L++ +KL D G LP +++ +PE +
Sbjct: 129 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP-IKWMAPESI 187
Query: 265 TSPATAGPSTDMWSLGVLLY-ILLSGVSPF 293
S D+W GV ++ IL+ GV PF
Sbjct: 188 NFRRFTSAS-DVWMFGVCMWEILMHGVKPF 216
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 108/271 (39%), Gaps = 38/271 (14%)
Query: 74 TFCINNEYKVLYTVPFET--------RWQQEQFEHRYEELERLGNGRFCTVRKARDRGTG 125
T IN+ Y VPFE+ F+H++ +G+G F V K R
Sbjct: 9 TNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKF----LIGHGVFGKVYKGVLRDGA 64
Query: 126 QLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGES 185
++ ++ P Q + E LS H H+ + + + ++ + + +
Sbjct: 65 KVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDER---NEMILIYKYMENGN 121
Query: 186 LIQHLCRQS--TITESY-----ICCIIRQLHSALHCLHSQQIAHKDIRPENILMN-GAVL 237
L +HL T++ S+ IC + LH LH++ I H+D++ NIL++ V
Sbjct: 122 LKRHLYGSDLPTMSMSWEQRLEICIGAAR---GLHYLHTRAIIHRDVKSINILLDENFVP 178
Query: 238 KLIDLGXXXXXX--------XXXLPDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLSG 289
K+ D G L + PE S D++S GV+L+ +L
Sbjct: 179 KITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKS-DVYSFGVVLFEVLCA 237
Query: 290 VSPFLDESEEETRAHISVADYSFPPEQCGHI 320
S + + R +++A+++ G +
Sbjct: 238 RSAIV---QSLPREMVNLAEWAVESHNNGQL 265
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 97/239 (40%), Gaps = 20/239 (8%)
Query: 93 WQQEQFEHRYEELE---RLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNL 149
W+++ +E E L+ +LG G+F V A + VA+K + + AE N+
Sbjct: 178 WEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTK-VAVKTMKPGSMSVEAFLAEANV 236
Query: 150 LSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESY--ICCIIRQ 207
+ TL H + A+ P+ I+ + + SL+ L + + Q
Sbjct: 237 MKTLQHDKLVKLHAVVTKEPI----YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQ 292
Query: 208 LHSALHCLHSQQIAHKDIRPENILMNGA-VLKLIDLGXXXXXXXXXLPDLEFAS-PEMLT 265
+ + + + H+D+R NIL++ + V K+ D G E A P T
Sbjct: 293 IAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWT 352
Query: 266 SP-----ATAGPSTDMWSLGVLLY-ILLSGVSPFLDESEEETRAHISVADYSFP-PEQC 317
+P + +D+WS G+LL I+ G P+ S E + Y P PE C
Sbjct: 353 APEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG-YRMPRPENC 410
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 96/231 (41%), Gaps = 30/231 (12%)
Query: 106 ERLGNGRFCTVRKARDRGTGQ---LVALKQIP---RERQPQQITRAEYNLLSTLMHAHIP 159
E +G G F V + R + G+ VA+K + ERQ ++ +E +++ H +I
Sbjct: 20 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFL-SEASIMGQFEHPNII 78
Query: 160 TALALFENA-PVPGTDTIVMQLVHGESLIQHL-CRQSTITESYICCIIRQLHSALHCLHS 217
+ N+ PV I+ + + +L L T + ++R + S + L
Sbjct: 79 RLEGVVTNSMPV----MILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAE 134
Query: 218 QQIAHKDIRPENILMN-GAVLKLIDLG------------XXXXXXXXXLPDLEFASPEML 264
H+D+ NIL+N V K+ D G +P + + +PE +
Sbjct: 135 MSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIP-IRWTAPEAI 193
Query: 265 TSPATAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPP 314
S D WS G++++ ++S G P+ D S ++ I DY PP
Sbjct: 194 AFRKFTSAS-DAWSYGIVMWEVMSFGERPYWDMSNQDVINAIE-QDYRLPP 242
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 108/271 (39%), Gaps = 38/271 (14%)
Query: 74 TFCINNEYKVLYTVPFET--------RWQQEQFEHRYEELERLGNGRFCTVRKARDRGTG 125
T IN+ Y VPFE+ F+H++ +G+G F V K R
Sbjct: 9 TNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKF----LIGHGVFGKVYKGVLRDGA 64
Query: 126 QLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGES 185
++ ++ P Q + E LS H H+ + + + ++ + + +
Sbjct: 65 KVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDER---NEMILIYKYMENGN 121
Query: 186 LIQHLCRQS--TITESY-----ICCIIRQLHSALHCLHSQQIAHKDIRPENILMN-GAVL 237
L +HL T++ S+ IC + LH LH++ I H+D++ NIL++ V
Sbjct: 122 LKRHLYGSDLPTMSMSWEQRLEICIGAAR---GLHYLHTRAIIHRDVKSINILLDENFVP 178
Query: 238 KLIDLGXXXXXX--------XXXLPDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLSG 289
K+ D G L + PE S D++S GV+L+ +L
Sbjct: 179 KITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKS-DVYSFGVVLFEVLCA 237
Query: 290 VSPFLDESEEETRAHISVADYSFPPEQCGHI 320
S + + R +++A+++ G +
Sbjct: 238 RSAIV---QSLPREMVNLAEWAVESHNNGQL 265
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 17/150 (11%)
Query: 155 HAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHL-CRQSTITESYICCIIRQLHSALH 213
H HI + + PV I+M+L L L R+ ++ + + QL +AL
Sbjct: 450 HPHIVKLIGVITENPV----WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALA 505
Query: 214 CLHSQQIAHKDIRPENILM-NGAVLKLIDLG--------XXXXXXXXXLPDLEFASPEML 264
L S++ H+DI N+L+ + +KL D G LP +++ +PE +
Sbjct: 506 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP-IKWMAPESI 564
Query: 265 TSPATAGPSTDMWSLGVLLY-ILLSGVSPF 293
S D+W GV ++ IL+ GV PF
Sbjct: 565 NFRRFTSAS-DVWMFGVCMWEILMHGVKPF 593
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 17/150 (11%)
Query: 155 HAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHL-CRQSTITESYICCIIRQLHSALH 213
H HI + + PV I+M+L L L R+ ++ + + QL +AL
Sbjct: 67 HPHIVKLIGVITENPV----WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 122
Query: 214 CLHSQQIAHKDIRPENILMNGA-VLKLIDLG--------XXXXXXXXXLPDLEFASPEML 264
L S++ H+DI N+L++ +KL D G LP +++ +PE +
Sbjct: 123 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP-IKWMAPESI 181
Query: 265 TSPATAGPSTDMWSLGVLLY-ILLSGVSPF 293
S D+W GV ++ IL+ GV PF
Sbjct: 182 NFRRFTSAS-DVWMFGVCMWEILMHGVKPF 210
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 17/150 (11%)
Query: 155 HAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHL-CRQSTITESYICCIIRQLHSALH 213
H HI + + PV I+M+L L L R+ ++ + + QL +AL
Sbjct: 70 HPHIVKLIGVITENPV----WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 125
Query: 214 CLHSQQIAHKDIRPENILMNGA-VLKLIDLG--------XXXXXXXXXLPDLEFASPEML 264
L S++ H+DI N+L++ +KL D G LP +++ +PE +
Sbjct: 126 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP-IKWMAPESI 184
Query: 265 TSPATAGPSTDMWSLGVLLY-ILLSGVSPF 293
S D+W GV ++ IL+ GV PF
Sbjct: 185 NFRRFTSAS-DVWMFGVCMWEILMHGVKPF 213
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 17/150 (11%)
Query: 155 HAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHL-CRQSTITESYICCIIRQLHSALH 213
H HI + + PV I+M+L L L R+ ++ + + QL +AL
Sbjct: 70 HPHIVKLIGVITENPV----WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 125
Query: 214 CLHSQQIAHKDIRPENILMNGA-VLKLIDLG--------XXXXXXXXXLPDLEFASPEML 264
L S++ H+DI N+L++ +KL D G LP +++ +PE +
Sbjct: 126 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP-IKWMAPESI 184
Query: 265 TSPATAGPSTDMWSLGVLLY-ILLSGVSPF 293
S D+W GV ++ IL+ GV PF
Sbjct: 185 NFRRFTSAS-DVWMFGVCMWEILMHGVKPF 213
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 65/132 (49%), Gaps = 11/132 (8%)
Query: 106 ERLGNGRFCTVRKARDRGTGQLVALKQIP-RERQPQQITRAEYNLLSTLMHAH-IPTALA 163
+++G G F +R ++ T + VA+K P + R PQ EY L IP
Sbjct: 36 KKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQ--LHLEYRFYKQLGSGDGIPQ--- 90
Query: 164 LFENAPVPGTDTIVMQLVHGESL--IQHLCRQSTITESYICCIIRQLHSALHCLHSQQIA 221
++ P + +V++L+ G SL + LC T + + I QL S + +HS+ +
Sbjct: 91 VYYFGPCGKYNAMVLELL-GPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSKNLI 148
Query: 222 HKDIRPENILMN 233
++D++PEN L+
Sbjct: 149 YRDVKPENFLIG 160
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 17/150 (11%)
Query: 155 HAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHL-CRQSTITESYICCIIRQLHSALH 213
H HI + + PV I+M+L L L R+ ++ + + QL +AL
Sbjct: 98 HPHIVKLIGVITENPV----WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 153
Query: 214 CLHSQQIAHKDIRPENILMNGA-VLKLIDLG--------XXXXXXXXXLPDLEFASPEML 264
L S++ H+DI N+L++ +KL D G LP +++ +PE +
Sbjct: 154 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP-IKWMAPESI 212
Query: 265 TSPATAGPSTDMWSLGVLLY-ILLSGVSPF 293
S D+W GV ++ IL+ GV PF
Sbjct: 213 NFRRFTSAS-DVWMFGVCMWEILMHGVKPF 241
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 17/150 (11%)
Query: 155 HAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHL-CRQSTITESYICCIIRQLHSALH 213
H HI + + PV I+M+L L L R+ ++ + + QL +AL
Sbjct: 75 HPHIVKLIGVITENPV----WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 130
Query: 214 CLHSQQIAHKDIRPENILMNGA-VLKLIDLG--------XXXXXXXXXLPDLEFASPEML 264
L S++ H+DI N+L++ +KL D G LP +++ +PE +
Sbjct: 131 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP-IKWMAPESI 189
Query: 265 TSPATAGPSTDMWSLGVLLY-ILLSGVSPF 293
S D+W GV ++ IL+ GV PF
Sbjct: 190 NFRRFTSAS-DVWMFGVCMWEILMHGVKPF 218
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 92/223 (41%), Gaps = 35/223 (15%)
Query: 108 LGNGRFCTVRKARDRGTGQLVALKQIPRERQP----QQITRAEYNLLSTLMHAHIPTALA 163
+G G + V A D+ T + VA+K++ R + ++I R E +L+ L +I
Sbjct: 34 IGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILR-EITILNRLKSDYIIRLYD 92
Query: 164 LFENAPVPGTDTIVMQLVHGESLIQHLCRQST-ITESYICCIIRQLHSALHCLHSQQIAH 222
L + D + + L +S ++ L + +TE +I I+ L + +H I H
Sbjct: 93 LIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIH 152
Query: 223 KDIRPENILMN-GAVLKLIDLG----XXXXXXXXXLPDLE-------------------- 257
+D++P N L+N +K+ D G + DLE
Sbjct: 153 RDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHV 212
Query: 258 ----FASPEMLTSPATAGPSTDMWSLGVLLYILLSGVSPFLDE 296
+ +PE++ S D+WS G + LL+ + +++
Sbjct: 213 VTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHIND 255
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 65/132 (49%), Gaps = 11/132 (8%)
Query: 106 ERLGNGRFCTVRKARDRGTGQLVALKQIP-RERQPQQITRAEYNLLSTLMHAH-IPTALA 163
+++G G F +R ++ T + VA+K P + R PQ EY L IP
Sbjct: 15 KKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQ--LHLEYRFYKQLGSGDGIPQ--- 69
Query: 164 LFENAPVPGTDTIVMQLVHGESL--IQHLCRQSTITESYICCIIRQLHSALHCLHSQQIA 221
++ P + +V++L+ G SL + LC T + + I QL S + +HS+ +
Sbjct: 70 VYYFGPCGKYNAMVLELL-GPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSKNLI 127
Query: 222 HKDIRPENILMN 233
++D++PEN L+
Sbjct: 128 YRDVKPENFLIG 139
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 17/150 (11%)
Query: 155 HAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHL-CRQSTITESYICCIIRQLHSALH 213
H HI + + PV I+M+L L L R+ ++ + + QL +AL
Sbjct: 70 HPHIVKLIGVITENPV----WIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALA 125
Query: 214 CLHSQQIAHKDIRPENILMNGA-VLKLIDLG--------XXXXXXXXXLPDLEFASPEML 264
L S++ H+DI N+L++ +KL D G LP +++ +PE +
Sbjct: 126 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLP-IKWMAPESI 184
Query: 265 TSPATAGPSTDMWSLGVLLY-ILLSGVSPF 293
S D+W GV ++ IL+ GV PF
Sbjct: 185 NFRRFTSAS-DVWMFGVCMWEILMHGVKPF 213
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 91/212 (42%), Gaps = 27/212 (12%)
Query: 98 FEHRY-EELERLGNGRFCTVRKAR----DRGTGQLVALKQIPRERQPQQIT-RAEYNLLS 151
FE R+ + + +LG G F +V R TG LVA+KQ+ QQ + E +L
Sbjct: 7 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 66
Query: 152 TLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR-QSTITESYICCIIRQLHS 210
L H+ P + +VM+ + L L R ++ + S + Q+
Sbjct: 67 AL-HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICK 125
Query: 211 ALHCLHSQQIAHKDIRPENILMNG-AVLKLIDLGXXXXXXXXXLP-DLEF-------ASP 261
+ L S++ H+D+ NIL+ A +K+ D G LP D ++ SP
Sbjct: 126 GMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKL-----LPLDKDYYVVREPGQSP 180
Query: 262 EMLTSPATAGPS-----TDMWSLGVLLYILLS 288
+P + + +D+WS GV+LY L +
Sbjct: 181 IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 91/212 (42%), Gaps = 27/212 (12%)
Query: 98 FEHRY-EELERLGNGRFCTVRKAR----DRGTGQLVALKQIPRERQPQQIT-RAEYNLLS 151
FE R+ + + +LG G F +V R TG LVA+KQ+ QQ + E +L
Sbjct: 20 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 79
Query: 152 TLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR-QSTITESYICCIIRQLHS 210
L H+ P + +VM+ + L L R ++ + S + Q+
Sbjct: 80 AL-HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICK 138
Query: 211 ALHCLHSQQIAHKDIRPENILMNG-AVLKLIDLGXXXXXXXXXLP-DLEF-------ASP 261
+ L S++ H+D+ NIL+ A +K+ D G LP D ++ SP
Sbjct: 139 GMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKL-----LPLDKDYYVVREPGQSP 193
Query: 262 EMLTSPATAGPS-----TDMWSLGVLLYILLS 288
+P + + +D+WS GV+LY L +
Sbjct: 194 IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 91/212 (42%), Gaps = 27/212 (12%)
Query: 98 FEHRY-EELERLGNGRFCTVRKAR----DRGTGQLVALKQIPRERQPQQIT-RAEYNLLS 151
FE R+ + + +LG G F +V R TG LVA+KQ+ QQ + E +L
Sbjct: 8 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 67
Query: 152 TLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR-QSTITESYICCIIRQLHS 210
L H+ P + +VM+ + L L R ++ + S + Q+
Sbjct: 68 AL-HSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICK 126
Query: 211 ALHCLHSQQIAHKDIRPENILMNG-AVLKLIDLGXXXXXXXXXLP-DLEF-------ASP 261
+ L S++ H+D+ NIL+ A +K+ D G LP D ++ SP
Sbjct: 127 GMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKL-----LPLDKDYYVVREPGQSP 181
Query: 262 EMLTSPATAGPS-----TDMWSLGVLLYILLS 288
+P + + +D+WS GV+LY L +
Sbjct: 182 IFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 27/211 (12%)
Query: 107 RLGNGRFCTVRKARDRGT----GQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTAL 162
+ G G F V K T +L A+ I E QQ + E + + H ++ L
Sbjct: 29 KXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQ-EIKVXAKCQHENLVELL 87
Query: 163 ALFENAPVPGTDTIVMQLVH--GESLIQHL-CRQST--ITESYICCIIRQLHSALHCLHS 217
+ D + + V+ SL+ L C T ++ C I + + ++ LH
Sbjct: 88 GFSSDG-----DDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHE 142
Query: 218 QQIAHKDIRPENILMNGA-VLKLIDLGXXXXXXXXX--------LPDLEFASPEMLTSPA 268
H+DI+ NIL++ A K+ D G + + +PE L
Sbjct: 143 NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALRGEI 202
Query: 269 TAGPSTDMWSLGVLLYILLSGVSPFLDESEE 299
T P +D++S GV+L +++G+ P +DE E
Sbjct: 203 T--PKSDIYSFGVVLLEIITGL-PAVDEHRE 230
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 15/147 (10%)
Query: 106 ERLGNGRFCTVRKARDRGTGQLVALKQIP-RERQPQQITRAEYNLLSTLMHAHIPTALAL 164
+++G G F +R ++ T + VA+K P + R PQ EY L +
Sbjct: 10 KKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQ--LHLEYRFYKQLSATEGVPQVYY 67
Query: 165 FENAPVPGTDTIVMQLVHGESL--IQHLCRQSTITESYICCIIRQLHSALHCLHSQQIAH 222
F P + +V++L+ G SL + LC T T + I QL + + +H++ + +
Sbjct: 68 F--GPXGKYNAMVLELL-GPSLEDLFDLC-DRTFTLKTVLMIAIQLITRMEYVHTKSLIY 123
Query: 223 KDIRPENILMNGAVLK------LIDLG 243
+D++PEN L+ K +ID G
Sbjct: 124 RDVKPENFLVGRPGTKRQHAIHIIDFG 150
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 15/152 (9%)
Query: 100 HRYEELERLGNGRFCTVRKARDRGTGQLVALK-QIPRERQPQ-QITRAEYNLLSTLMHAH 157
+RY ++G+G F + D G+ VA+K + + + PQ I Y ++
Sbjct: 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQG--GVG 66
Query: 158 IPTALALFENAPVPGTDTIVMQLVHG--ESLIQHLCRQSTITESYICCIIRQLHSALHCL 215
IPT + +VM+L+ E L R+ ++ + + Q+ S + +
Sbjct: 67 IPTIRWCGAEGDY---NVMVMELLGPSLEDLFNFCSRKFSLKT--VLLLADQMISRIEYI 121
Query: 216 HSQQIAHKDIRPENILMN----GAVLKLIDLG 243
HS+ H+D++P+N LM G ++ +ID G
Sbjct: 122 HSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFG 153
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 15/152 (9%)
Query: 100 HRYEELERLGNGRFCTVRKARDRGTGQLVALK-QIPRERQPQ-QITRAEYNLLSTLMHAH 157
+RY ++G+G F + D G+ VA+K + + + PQ I Y ++
Sbjct: 7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQG--GVG 64
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESL--IQHLCRQSTITESYICCIIRQLHSALHCL 215
IPT + +VM+L+ G SL + + C + ++ + + Q+ S + +
Sbjct: 65 IPTIRWCGAEGDY---NVMVMELL-GPSLEDLFNFCSRKFSLKT-VLLLADQMISRIEYI 119
Query: 216 HSQQIAHKDIRPENILMN----GAVLKLIDLG 243
HS+ H+D++P+N LM G ++ +ID G
Sbjct: 120 HSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFG 151
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 87/209 (41%), Gaps = 26/209 (12%)
Query: 106 ERLGNGRFCTVRKARDRGTGQLVALKQI---PRERQPQQITR-----AEYNLLSTLMHAH 157
+++G G F V K R +VA+K + E + + I + E ++S L H +
Sbjct: 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPN 84
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQS-TITESYICCIIRQLHSALHCLH 216
I L N P +VM+ V L L ++ I S ++ + + +
Sbjct: 85 IVKLYGLMHNPP-----RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 217 SQQ--IAHKDIRPENILM-----NGAV-LKLIDLGXXXXXX---XXXLPDLEFASPEMLT 265
+Q I H+D+R NI + N V K+ D G L + ++ +PE +
Sbjct: 140 NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGNFQWMAPETIG 199
Query: 266 SPATA-GPSTDMWSLGVLLYILLSGVSPF 293
+ + D +S ++LY +L+G PF
Sbjct: 200 AEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 49/102 (48%), Gaps = 14/102 (13%)
Query: 201 ICCIIRQLHSALHCLHSQQIAHKDIRPENILMNG-----AVLKLIDLGXXXXXXXXXLP- 254
+ ++ Q+ +H LH+ + H+D++P NIL+ G +K+ D+G P
Sbjct: 130 VKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPL 189
Query: 255 -DLE-------FASPEMLTSPATAGPSTDMWSLGVLLYILLS 288
DL+ + +PE+L + D+W++G + LL+
Sbjct: 190 ADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 231
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 87/209 (41%), Gaps = 26/209 (12%)
Query: 106 ERLGNGRFCTVRKARDRGTGQLVALKQI---PRERQPQQITR-----AEYNLLSTLMHAH 157
+++G G F V K R +VA+K + E + + I + E ++S L H +
Sbjct: 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPN 84
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQS-TITESYICCIIRQLHSALHCLH 216
I L N P +VM+ V L L ++ I S ++ + + +
Sbjct: 85 IVKLYGLMHNPP-----RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 217 SQQ--IAHKDIRPENILM-----NGAV-LKLIDLGXXXXXX---XXXLPDLEFASPEMLT 265
+Q I H+D+R NI + N V K+ D G L + ++ +PE +
Sbjct: 140 NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETIG 199
Query: 266 SPATA-GPSTDMWSLGVLLYILLSGVSPF 293
+ + D +S ++LY +L+G PF
Sbjct: 200 AEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 102/272 (37%), Gaps = 38/272 (13%)
Query: 105 LERLGNGRFCTVRKARDRGTGQ-----LVALKQIPR--ERQPQQITRAEYNLLSTLMHAH 157
+ LG+G F V + + G VA+K +P Q + E ++S H +
Sbjct: 50 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQN 109
Query: 158 IPTALAL-FENAPVPGTDTIVMQLVHGESLIQHL-------CRQSTITESYICCIIRQLH 209
I + + ++ P I+M+L+ G L L + S++ + + R +
Sbjct: 110 IVRCIGVSLQSLP----RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 165
Query: 210 SALHCLHSQQIAHKDIRPENILMN----GAVLKLIDLGXXX---------XXXXXXLPDL 256
L H+DI N L+ G V K+ D G LP +
Sbjct: 166 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP-V 224
Query: 257 EFASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPE 315
++ PE TD WS GVLL+ + S G P+ +S +E ++ PP+
Sbjct: 225 KWMPPEAFME-GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK 283
Query: 316 QCGHISVPARELIGQLLNTHADKRPTAGQLLQ 347
C P ++ Q + RP +L+
Sbjct: 284 NC---PGPVYRIMTQCWQHQPEDRPNFAIILE 312
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 102/269 (37%), Gaps = 38/269 (14%)
Query: 108 LGNGRFCTVRKARDRGTGQ-----LVALKQIPR--ERQPQQITRAEYNLLSTLMHAHIPT 160
LG+G F V + + G VA+K +P Q + E ++S L H +I
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 161 ALAL-FENAPVPGTDTIVMQLVHGESLIQHL-------CRQSTITESYICCIIRQLHSAL 212
+ + ++ P I+++L+ G L L + S++ + + R +
Sbjct: 113 CIGVSLQSLP----RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 168
Query: 213 HCLHSQQIAHKDIRPENILMN----GAVLKLIDLGXXX---------XXXXXXLPDLEFA 259
L H+DI N L+ G V K+ D G LP +++
Sbjct: 169 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP-VKWM 227
Query: 260 SPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQCG 318
PE TD WS GVLL+ + S G P+ +S +E ++ PP+ C
Sbjct: 228 PPEAFME-GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNC- 285
Query: 319 HISVPARELIGQLLNTHADKRPTAGQLLQ 347
P ++ Q + RP +L+
Sbjct: 286 --PGPVYRIMTQCWQHQPEDRPNFAIILE 312
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 101/269 (37%), Gaps = 38/269 (14%)
Query: 108 LGNGRFCTVRKARDRGTGQ-----LVALKQIPR--ERQPQQITRAEYNLLSTLMHAHIPT 160
LG+G F V + + G VA+K +P Q + E ++S H +I
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 161 ALAL-FENAPVPGTDTIVMQLVHGESLIQHL-------CRQSTITESYICCIIRQLHSAL 212
+ + ++ P I+M+L+ G L L + S++ + + R +
Sbjct: 98 CIGVSLQSLP----RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 153
Query: 213 HCLHSQQIAHKDIRPENILMN----GAVLKLIDLGXXX---------XXXXXXLPDLEFA 259
L H+DI N L+ G V K+ D G LP +++
Sbjct: 154 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP-VKWM 212
Query: 260 SPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQCG 318
PE TD WS GVLL+ + S G P+ +S +E ++ PP+ C
Sbjct: 213 PPEAFME-GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNC- 270
Query: 319 HISVPARELIGQLLNTHADKRPTAGQLLQ 347
P ++ Q + RP +L+
Sbjct: 271 --PGPVYRIMTQCWQHQPEDRPNFAIILE 297
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 107/271 (39%), Gaps = 24/271 (8%)
Query: 93 WQQEQFEHRYEELE---RLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNL 149
W ++ +E E ++ RLG G+F V + + VA+K + Q E NL
Sbjct: 3 WDKDAWEIPRESIKLVKRLGAGQFGEVWMGYYNNSTK-VAVKTLKPGTMSVQAFLEEANL 61
Query: 150 LSTLMHAHIPTALALF-ENAPVPGTDTIVMQLVHGESLIQHLCRQ--STITESYICCIIR 206
+ TL H + A+ P+ I+ + + SL+ L + +
Sbjct: 62 MKTLQHDKLVRLYAVVTREEPI----YIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSA 117
Query: 207 QLHSALHCLHSQQIAHKDIRPENILMNGAVL-KLIDLGXXXXXXXXXLPDLEFAS-PEML 264
Q+ + + + H+D+R N+L++ +++ K+ D G E A P
Sbjct: 118 QIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKW 177
Query: 265 TSPATAG-----PSTDMWSLGVLLY-ILLSGVSPFLDESEEETRAHISVADYSFPP-EQC 317
T+P +D+WS G+LLY I+ G P+ + + +S Y P E C
Sbjct: 178 TAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALSQG-YRMPRVENC 236
Query: 318 GHISVPARELIGQLLNTHADKRPTAGQLLQV 348
+++ A++RPT L V
Sbjct: 237 PD---ELYDIMKMCWKEKAEERPTFDYLQSV 264
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 102/269 (37%), Gaps = 38/269 (14%)
Query: 108 LGNGRFCTVRKARDRGTGQ-----LVALKQIPR--ERQPQQITRAEYNLLSTLMHAHIPT 160
LG+G F V + + G VA+K +P Q + E ++S L H +I
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 161 ALAL-FENAPVPGTDTIVMQLVHGESLIQHL-------CRQSTITESYICCIIRQLHSAL 212
+ + ++ P I+++L+ G L L + S++ + + R +
Sbjct: 99 CIGVSLQSLP----RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGC 154
Query: 213 HCLHSQQIAHKDIRPENILMN----GAVLKLIDLGXXXXXXXXX---------LPDLEFA 259
L H+DI N L+ G V K+ D G LP +++
Sbjct: 155 QYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP-VKWM 213
Query: 260 SPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQCG 318
PE TD WS GVLL+ + S G P+ +S +E ++ PP+ C
Sbjct: 214 PPEAFME-GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNC- 271
Query: 319 HISVPARELIGQLLNTHADKRPTAGQLLQ 347
P ++ Q + RP +L+
Sbjct: 272 --PGPVYRIMTQCWQHQPEDRPNFAIILE 298
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 102/246 (41%), Gaps = 46/246 (18%)
Query: 108 LGNGRFCTVRKARDRG-----TGQLVALKQIPRERQPQQITRAEYNLLSTLMH-AHIPTA 161
LG G F V +A G T + VA+K + +E RA + L L+H H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKML-KEGATHSEHRALMSELKILIHIGHHLNV 93
Query: 162 LALFENAPVPGTD-TIVMQLVHGESLIQHL------------CRQSTITESYICCIIRQL 208
+ L PG ++++ +L +L + +T ++ C Q+
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQV 153
Query: 209 HSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLPD----------LE 257
+ L S++ H+D+ NIL++ V+K+ D G PD L+
Sbjct: 154 AKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKD--PDYVRKGDARLPLK 211
Query: 258 FASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPF----LDES-----EEETRAHISV 307
+ +PE + S D+WS GVLL+ + S G SP+ +DE +E TR +
Sbjct: 212 WMAPETIFDRVYTIQS-DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR--MRA 268
Query: 308 ADYSFP 313
DY+ P
Sbjct: 269 PDYTTP 274
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 87/209 (41%), Gaps = 21/209 (10%)
Query: 98 FEHRY-EELERLGNGRFCTVRKAR----DRGTGQLVALKQIPRERQPQQIT-RAEYNLLS 151
FE R+ + + +LG G F +V R TG LVA+KQ+ QQ + E +L
Sbjct: 4 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK 63
Query: 152 TLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR-QSTITESYICCIIRQLHS 210
L H+ P +VM+ + L L R ++ + S + Q+
Sbjct: 64 AL-HSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICK 122
Query: 211 ALHCLHSQQIAHKDIRPENILMNG-AVLKLIDLGXXX----------XXXXXXLPDLEFA 259
+ L S++ H+D+ NIL+ A +K+ D G P +A
Sbjct: 123 GMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYA 182
Query: 260 SPEMLTSPATAGPSTDMWSLGVLLYILLS 288
PE L+ + S D+WS GV+LY L +
Sbjct: 183 -PESLSDNIFSRQS-DVWSFGVVLYELFT 209
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 98/230 (42%), Gaps = 35/230 (15%)
Query: 101 RYEELERLGNGRFCTVRKARD-RGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIP 159
RYE ++ LG G F V + D + G+ VA+K + + + R+E +L L + P
Sbjct: 15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHL-NTTDP 73
Query: 160 TA----LALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTI--TESYICCIIRQLHSALH 213
+ + + E G IV +L+ G S + + +I + Q+ +++
Sbjct: 74 NSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVN 132
Query: 214 CLHSQQIAHKDIRPENILM---------NGAV-----------LKLIDLGXXXXXX---X 250
LHS ++ H D++PENIL N + +K++D G
Sbjct: 133 FLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHS 192
Query: 251 XXLPDLEFASPEMLTSPATAGPSTDMWSLGVLL--YILLSGVSPFLDESE 298
+ + +PE++ + + P D+WS+G +L Y L V P D E
Sbjct: 193 TLVSTRHYRAPEVILALGWSQP-CDVWSIGCILIEYYLGFTVFPTHDSKE 241
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 65/157 (41%), Gaps = 17/157 (10%)
Query: 204 IIRQLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLPDLEFAS-- 260
++R + S + L H+D+ NIL+N V K+ D G P+ + +
Sbjct: 121 MLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDD--PEAAYTTRG 178
Query: 261 ---PEMLTSPATAG-----PSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYS 311
P T+P ++D+WS G++++ ++S G P+ D S ++ I
Sbjct: 179 GKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRL 238
Query: 312 FPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV 348
PP C + +L+ RP GQ++ +
Sbjct: 239 PPPMDC---PIALHQLMLDCWQKERSDRPKFGQIVNM 272
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 65/157 (41%), Gaps = 17/157 (10%)
Query: 204 IIRQLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLPDLEFAS-- 260
++R + S + L H+D+ NIL+N V K+ D G P+ + +
Sbjct: 115 MLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDD--PEAAYTTRG 172
Query: 261 ---PEMLTSPATAG-----PSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYS 311
P T+P ++D+WS G++++ ++S G P+ D S ++ I
Sbjct: 173 GKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRL 232
Query: 312 FPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV 348
PP C + +L+ RP GQ++ +
Sbjct: 233 PPPMDC---PIALHQLMLDCWQKERSDRPKFGQIVNM 266
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 58/158 (36%), Gaps = 19/158 (12%)
Query: 204 IIRQLHSALHCLHSQQIAHKDIRPENILMN----GAVLKLIDLGXXXXXXXXX------- 252
+ R + L H+DI N L+ G V K+ D G
Sbjct: 146 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 205
Query: 253 --LPDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVAD 309
LP +++ PE TD WS GVLL+ + S G P+ +S +E ++
Sbjct: 206 AMLP-VKWMPPEAFME-GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG 263
Query: 310 YSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ 347
PP+ C P ++ Q + RP +L+
Sbjct: 264 RMDPPKNC---PGPVYRIMTQCWQHQPEDRPNFAIILE 298
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 98/230 (42%), Gaps = 35/230 (15%)
Query: 101 RYEELERLGNGRFCTVRKARD-RGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIP 159
RYE ++ LG G F V + D + G+ VA+K + + + R+E +L L + P
Sbjct: 15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHL-NTTDP 73
Query: 160 TA----LALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTI--TESYICCIIRQLHSALH 213
+ + + E G IV +L+ G S + + +I + Q+ +++
Sbjct: 74 NSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVN 132
Query: 214 CLHSQQIAHKDIRPENILM---------NGAV-----------LKLIDLGXXXXXX---X 250
LHS ++ H D++PENIL N + +K++D G
Sbjct: 133 FLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHS 192
Query: 251 XXLPDLEFASPEMLTSPATAGPSTDMWSLGVLL--YILLSGVSPFLDESE 298
+ + +PE++ + + P D+WS+G +L Y L V P D E
Sbjct: 193 TLVXXRHYRAPEVILALGWSQP-CDVWSIGCILIEYYLGFTVFPTHDSKE 241
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 58/158 (36%), Gaps = 19/158 (12%)
Query: 204 IIRQLHSALHCLHSQQIAHKDIRPENILMN----GAVLKLIDLGXXXXXXXXX------- 252
+ R + L H+DI N L+ G V K+ D G
Sbjct: 146 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGC 205
Query: 253 --LPDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVAD 309
LP +++ PE TD WS GVLL+ + S G P+ +S +E ++
Sbjct: 206 AMLP-VKWMPPEAFME-GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG 263
Query: 310 YSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ 347
PP+ C P ++ Q + RP +L+
Sbjct: 264 RMDPPKNC---PGPVYRIMTQCWQHQPEDRPNFAIILE 298
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 65/157 (41%), Gaps = 17/157 (10%)
Query: 204 IIRQLHSALHCLHSQQIAHKDIRPENILMNGA-VLKLIDLGXXXXXXXXXLPDLEFAS-- 260
++R + S + L H+D+ NIL+N V K+ D G P+ + +
Sbjct: 136 MLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDD--PEAAYTTRG 193
Query: 261 ---PEMLTSPATAG-----PSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYS 311
P T+P ++D+WS G++++ ++S G P+ D S ++ I
Sbjct: 194 GKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRL 253
Query: 312 FPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV 348
PP C + +L+ RP GQ++ +
Sbjct: 254 PPPMDC---PIALHQLMLDCWQKERSDRPKFGQIVNM 287
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 58/158 (36%), Gaps = 19/158 (12%)
Query: 204 IIRQLHSALHCLHSQQIAHKDIRPENILMN----GAVLKLIDLGXXXXXXXXX------- 252
+ R + L H+DI N L+ G V K+ D G
Sbjct: 160 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 219
Query: 253 --LPDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVAD 309
LP +++ PE TD WS GVLL+ + S G P+ +S +E ++
Sbjct: 220 AMLP-VKWMPPEAFME-GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG 277
Query: 310 YSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ 347
PP+ C P ++ Q + RP +L+
Sbjct: 278 RMDPPKNC---PGPVYRIMTQCWQHQPEDRPNFAIILE 312
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 58/158 (36%), Gaps = 19/158 (12%)
Query: 204 IIRQLHSALHCLHSQQIAHKDIRPENILMN----GAVLKLIDLGXXX---------XXXX 250
+ R + L H+DI N L+ G V K+ D G
Sbjct: 137 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 196
Query: 251 XXLPDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVAD 309
LP +++ PE TD WS GVLL+ + S G P+ +S +E ++
Sbjct: 197 AMLP-VKWMPPEAFME-GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG 254
Query: 310 YSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ 347
PP+ C P ++ Q + RP +L+
Sbjct: 255 RMDPPKNC---PGPVYRIMTQCWQHQPEDRPNFAIILE 289
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 58/158 (36%), Gaps = 19/158 (12%)
Query: 204 IIRQLHSALHCLHSQQIAHKDIRPENILMN----GAVLKLIDLGXXXXXXXXX------- 252
+ R + L H+DI N L+ G V K+ D G
Sbjct: 152 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 211
Query: 253 --LPDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVAD 309
LP +++ PE TD WS GVLL+ + S G P+ +S +E ++
Sbjct: 212 AMLP-VKWMPPEAFME-GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG 269
Query: 310 YSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ 347
PP+ C P ++ Q + RP +L+
Sbjct: 270 RMDPPKNC---PGPVYRIMTQCWQHQPEDRPNFAIILE 304
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 58/158 (36%), Gaps = 19/158 (12%)
Query: 204 IIRQLHSALHCLHSQQIAHKDIRPENILMN----GAVLKLIDLGXXX---------XXXX 250
+ R + L H+DI N L+ G V K+ D G
Sbjct: 145 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 204
Query: 251 XXLPDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVAD 309
LP +++ PE TD WS GVLL+ + S G P+ +S +E ++
Sbjct: 205 AMLP-VKWMPPEAFME-GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG 262
Query: 310 YSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ 347
PP+ C P ++ Q + RP +L+
Sbjct: 263 RMDPPKNC---PGPVYRIMTQCWQHQPEDRPNFAIILE 297
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 58/158 (36%), Gaps = 19/158 (12%)
Query: 204 IIRQLHSALHCLHSQQIAHKDIRPENILMN----GAVLKLIDLGXXX---------XXXX 250
+ R + L H+DI N L+ G V K+ D G
Sbjct: 163 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGC 222
Query: 251 XXLPDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVAD 309
LP +++ PE TD WS GVLL+ + S G P+ +S +E ++
Sbjct: 223 AMLP-VKWMPPEAFME-GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG 280
Query: 310 YSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ 347
PP+ C P ++ Q + RP +L+
Sbjct: 281 RMDPPKNC---PGPVYRIMTQCWQHQPEDRPNFAIILE 315
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 58/158 (36%), Gaps = 19/158 (12%)
Query: 204 IIRQLHSALHCLHSQQIAHKDIRPENILMN----GAVLKLIDLGXXXXXXXXX------- 252
+ R + L H+DI N L+ G V K+ D G
Sbjct: 172 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 231
Query: 253 --LPDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVAD 309
LP +++ PE TD WS GVLL+ + S G P+ +S +E ++
Sbjct: 232 AMLP-VKWMPPEAFME-GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG 289
Query: 310 YSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ 347
PP+ C P ++ Q + RP +L+
Sbjct: 290 RMDPPKNC---PGPVYRIMTQCWQHQPEDRPNFAIILE 324
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 58/158 (36%), Gaps = 19/158 (12%)
Query: 204 IIRQLHSALHCLHSQQIAHKDIRPENILMN----GAVLKLIDLGXXXXXXXXX------- 252
+ R + L H+DI N L+ G V K+ D G
Sbjct: 162 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGC 221
Query: 253 --LPDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVAD 309
LP +++ PE TD WS GVLL+ + S G P+ +S +E ++
Sbjct: 222 AMLP-VKWMPPEAFME-GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG 279
Query: 310 YSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ 347
PP+ C P ++ Q + RP +L+
Sbjct: 280 RMDPPKNC---PGPVYRIMTQCWQHQPEDRPNFAIILE 314
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 88/209 (42%), Gaps = 20/209 (9%)
Query: 98 FEHRY-EELERLGNGRFCTVRKAR----DRGTGQLVALKQIPRERQPQQIT--RAEYNLL 150
FE R+ + + LG G F V R TG+ VA+K + E I + E +L
Sbjct: 18 FEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEIL 77
Query: 151 STLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR-QSTITESYICCIIRQLH 209
L H +I + G ++M+ + SL ++L + ++ I Q+
Sbjct: 78 RNLYHENIVKYKGICTEDGGNGI-KLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQIC 136
Query: 210 SALHCLHSQQIAHKDIRPENILMNGA-VLKLIDLGXXXX----XXXXXLPDLEFASPEML 264
+ L S+Q H+D+ N+L+ +K+ D G + D + SP
Sbjct: 137 KGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKD-DRDSPVFW 195
Query: 265 TSPATAGPS-----TDMWSLGVLLYILLS 288
+P S +D+WS GV L+ LL+
Sbjct: 196 YAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 26/142 (18%)
Query: 193 QSTITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXX 251
+ +T ++ C Q+ + L S++ H+D+ NIL++ V+K+ D G
Sbjct: 133 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 192
Query: 252 XLPD----------LEFASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPF----LDE 296
PD L++ +PE + S D+WS GVLL+ + S G SP+ +DE
Sbjct: 193 --PDYVRKGDARLPLKWMAPETIFDRVYTIQS-DVWSFGVLLWEIFSLGASPYPGVKIDE 249
Query: 297 S-----EEETRAHISVADYSFP 313
+E TR + DY+ P
Sbjct: 250 EFCRRLKEGTR--MRAPDYTTP 269
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 58/158 (36%), Gaps = 19/158 (12%)
Query: 204 IIRQLHSALHCLHSQQIAHKDIRPENILMN----GAVLKLIDLGXXX---------XXXX 250
+ R + L H+DI N L+ G V K+ D G
Sbjct: 186 VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGC 245
Query: 251 XXLPDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVAD 309
LP +++ PE TD WS GVLL+ + S G P+ +S +E ++
Sbjct: 246 AMLP-VKWMPPEAFME-GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGG 303
Query: 310 YSFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQ 347
PP+ C P ++ Q + RP +L+
Sbjct: 304 RMDPPKNC---PGPVYRIMTQCWQHQPEDRPNFAIILE 338
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 88/209 (42%), Gaps = 20/209 (9%)
Query: 98 FEHRY-EELERLGNGRFCTVRKAR----DRGTGQLVALKQIPRERQPQQIT--RAEYNLL 150
FE R+ + + LG G F V R TG+ VA+K + E I + E +L
Sbjct: 6 FEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEIL 65
Query: 151 STLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR-QSTITESYICCIIRQLH 209
L H +I + G ++M+ + SL ++L + ++ I Q+
Sbjct: 66 RNLYHENIVKYKGICTEDGGNGI-KLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQIC 124
Query: 210 SALHCLHSQQIAHKDIRPENILMNGA-VLKLIDLGXXXX----XXXXXLPDLEFASPEML 264
+ L S+Q H+D+ N+L+ +K+ D G + D + SP
Sbjct: 125 KGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKD-DRDSPVFW 183
Query: 265 TSPATAGPS-----TDMWSLGVLLYILLS 288
+P S +D+WS GV L+ LL+
Sbjct: 184 YAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 68/148 (45%), Gaps = 7/148 (4%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQP----QQITRAEYNLLSTLMHAH 157
YE +G G + V A D+ + VA+K++ R + ++I R E +L+ L +
Sbjct: 30 YEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILR-EITILNRLKSDY 88
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQST-ITESYICCIIRQLHSALHCLH 216
I L + D + + L +S ++ L + +TE ++ I+ L +H
Sbjct: 89 IIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKFIH 148
Query: 217 SQQIAHKDIRPENILMN-GAVLKLIDLG 243
I H+D++P N L+N +K+ D G
Sbjct: 149 ESGIIHRDLKPANCLLNQDCSVKICDFG 176
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 66/142 (46%), Gaps = 26/142 (18%)
Query: 193 QSTITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXX 251
+ +T ++ C Q+ + L S++ H+D+ NIL++ V+K+ D G
Sbjct: 133 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD 192
Query: 252 XLPD----------LEFASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPF----LDE 296
PD L++ +PE + S D+WS GVLL+ + S G SP+ +DE
Sbjct: 193 --PDXVRKGDARLPLKWMAPETIFDRVYTIQS-DVWSFGVLLWEIFSLGASPYPGVKIDE 249
Query: 297 S-----EEETRAHISVADYSFP 313
+E TR + DY+ P
Sbjct: 250 EFCRRLKEGTR--MRAPDYTTP 269
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 26/142 (18%)
Query: 193 QSTITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXX 251
+ +T ++ C Q+ + L S++ H+D+ NIL++ V+K+ D G
Sbjct: 133 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 192
Query: 252 XLPD----------LEFASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPF----LDE 296
PD L++ +PE + S D+WS GVLL+ + S G SP+ +DE
Sbjct: 193 --PDYVRKGDARLPLKWMAPETIFDRVYTIQS-DVWSFGVLLWEIFSLGASPYPGVKIDE 249
Query: 297 S-----EEETRAHISVADYSFP 313
+E TR + DY+ P
Sbjct: 250 EFCRRLKEGTR--MRAPDYTTP 269
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 26/142 (18%)
Query: 193 QSTITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXX 251
+ +T ++ C Q+ + L S++ H+D+ NIL++ V+K+ D G
Sbjct: 185 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 244
Query: 252 XLPD----------LEFASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPF----LDE 296
PD L++ +PE + S D+WS GVLL+ + S G SP+ +DE
Sbjct: 245 --PDYVRKGDARLPLKWMAPETIFDRVYTIQS-DVWSFGVLLWEIFSLGASPYPGVKIDE 301
Query: 297 S-----EEETRAHISVADYSFP 313
+E TR + DY+ P
Sbjct: 302 EFCRRLKEGTR--MRAPDYTTP 321
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 66/142 (46%), Gaps = 26/142 (18%)
Query: 193 QSTITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXX 251
+ +T ++ C Q+ + L S++ H+D+ NIL++ V+K+ D G
Sbjct: 133 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD 192
Query: 252 XLPD----------LEFASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPF----LDE 296
PD L++ +PE + S D+WS GVLL+ + S G SP+ +DE
Sbjct: 193 --PDXVRKGDARLPLKWMAPETIFDRVYTIQS-DVWSFGVLLWEIFSLGASPYPGVKIDE 249
Query: 297 S-----EEETRAHISVADYSFP 313
+E TR + DY+ P
Sbjct: 250 EFCRRLKEGTR--MRAPDYTTP 269
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 26/142 (18%)
Query: 193 QSTITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXX 251
+ +T ++ C Q+ + L S++ H+D+ NIL++ V+K+ D G
Sbjct: 187 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 246
Query: 252 XLPD----------LEFASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPF----LDE 296
PD L++ +PE + S D+WS GVLL+ + S G SP+ +DE
Sbjct: 247 --PDYVRKGDARLPLKWMAPETIFDRVYTIQS-DVWSFGVLLWEIFSLGASPYPGVKIDE 303
Query: 297 S-----EEETRAHISVADYSFP 313
+E TR + DY+ P
Sbjct: 304 EFCRRLKEGTR--MRAPDYTTP 323
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 94/238 (39%), Gaps = 38/238 (15%)
Query: 105 LERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLS--TLMHAHIPTAL 162
LE GRF V KA+ + VA+K P Q +Q + EY + S + H +I +
Sbjct: 29 LEVKARGRFGCVWKAQL--LNEYVAVKIFPI--QDKQSWQNEYEVYSLPGMKHENILQFI 84
Query: 163 ALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ---- 218
+ D ++ H + + + + ++ + +C I + L LH
Sbjct: 85 GAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGL 144
Query: 219 ------QIAHKDIRPENILMN----------GAVLKLIDLGXXXXXXXXXLPDLEFASPE 262
I+H+DI+ +N+L+ G LK + G + + +PE
Sbjct: 145 KDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKF-EAGKSAGDTHGQVGTRRYMAPE 203
Query: 263 MLTSPAT----AGPSTDMWSLGVLLYILLSG-------VSPFLDESEEETRAHISVAD 309
+L A DM+++G++L+ L S V ++ EEE H S+ D
Sbjct: 204 VLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLED 261
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 26/142 (18%)
Query: 193 QSTITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXX 251
+ +T ++ C Q+ + L S++ H+D+ NIL++ V+K+ D G
Sbjct: 192 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 251
Query: 252 XLPD----------LEFASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPF----LDE 296
PD L++ +PE + S D+WS GVLL+ + S G SP+ +DE
Sbjct: 252 --PDYVRKGDARLPLKWMAPETIFDRVYTIQS-DVWSFGVLLWEIFSLGASPYPGVKIDE 308
Query: 297 S-----EEETRAHISVADYSFP 313
+E TR + DY+ P
Sbjct: 309 EFCRRLKEGTR--MRAPDYTTP 328
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 53/124 (42%), Gaps = 9/124 (7%)
Query: 203 CIIRQLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXL--PDLEFA 259
CI RQ+ + + L ++ H+D+ N L+ V+K+ D G D A
Sbjct: 178 CIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDA 237
Query: 260 SPEMLTSPATA-----GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP 313
P P + +D+W+ GV+L+ + S G+ P+ + EE ++ +
Sbjct: 238 IPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILAC 297
Query: 314 PEQC 317
PE C
Sbjct: 298 PENC 301
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 26/142 (18%)
Query: 193 QSTITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXX 251
+ +T ++ C Q+ + L S++ H+D+ NIL++ V+K+ D G
Sbjct: 194 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 253
Query: 252 XLPD----------LEFASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPF----LDE 296
PD L++ +PE + S D+WS GVLL+ + S G SP+ +DE
Sbjct: 254 --PDYVRKGDARLPLKWMAPETIFDRVYTIQS-DVWSFGVLLWEIFSLGASPYPGVKIDE 310
Query: 297 S-----EEETRAHISVADYSFP 313
+E TR + DY+ P
Sbjct: 311 EFCRRLKEGTR--MRAPDYTTP 330
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 30/199 (15%)
Query: 176 IVMQLVHGESLIQHLCRQSTIT--ESYICC-IIRQLHSALHCLHSQQIAHKDIRPENILM 232
I MQL E+L + R+ ++ E +C I Q+ A+ LHS+ + H+D++P NI
Sbjct: 138 IQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFF 197
Query: 233 N-GAVLKLIDLGXXXXXXXXX--------LPDLE----------FASPEMLTSPATAGPS 273
V+K+ D G +P + SPE +
Sbjct: 198 TMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHG-NNYSHK 256
Query: 274 TDMWSLGVLLYILLSGVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ-LL 332
D++SLG++L+ LL S + E R V + FP P ++ Q +L
Sbjct: 257 VDIFSLGLILFELLYSFSTQM----ERVRIITDVRNLKFP--LLFTQKYPQEHMMVQDML 310
Query: 333 NTHADKRPTAGQLLQVAWF 351
+ +RP A +++ A F
Sbjct: 311 SPSPTERPEATDIIENAIF 329
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 26/142 (18%)
Query: 193 QSTITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXX 251
+ +T ++ C Q+ + L S++ H+D+ NIL++ V+K+ D G
Sbjct: 179 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 238
Query: 252 XLPD----------LEFASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPF----LDE 296
PD L++ +PE + S D+WS GVLL+ + S G SP+ +DE
Sbjct: 239 --PDYVRKGDARLPLKWMAPETIFDRVYTIQS-DVWSFGVLLWEIFSLGASPYPGVKIDE 295
Query: 297 S-----EEETRAHISVADYSFP 313
+E TR + DY+ P
Sbjct: 296 EFCRRLKEGTR--MRAPDYTTP 315
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 26/142 (18%)
Query: 193 QSTITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXX 251
+ +T ++ C Q+ + L S++ H+D+ NIL++ V+K+ D G
Sbjct: 142 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 201
Query: 252 XLPD----------LEFASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPF----LDE 296
PD L++ +PE + S D+WS GVLL+ + S G SP+ +DE
Sbjct: 202 --PDYVRKGDARLPLKWMAPETIFDRVYTIQS-DVWSFGVLLWEIFSLGASPYPGVKIDE 258
Query: 297 S-----EEETRAHISVADYSFP 313
+E TR + DY+ P
Sbjct: 259 EFCRRLKEGTR--MRAPDYTTP 278
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 26/142 (18%)
Query: 193 QSTITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXX 251
+ +T ++ C Q+ + L S++ H+D+ NIL++ V+K+ D G
Sbjct: 144 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 203
Query: 252 XLPD----------LEFASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPF----LDE 296
PD L++ +PE + S D+WS GVLL+ + S G SP+ +DE
Sbjct: 204 --PDYVRKGDARLPLKWMAPETIFDRVYTIQS-DVWSFGVLLWEIFSLGASPYPGVKIDE 260
Query: 297 S-----EEETRAHISVADYSFP 313
+E TR + DY+ P
Sbjct: 261 EFCRRLKEGTR--MRAPDYTTP 280
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 26/142 (18%)
Query: 193 QSTITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXX 251
+ +T ++ C Q+ + L S++ H+D+ NIL++ V+K+ D G
Sbjct: 142 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 201
Query: 252 XLPD----------LEFASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPF----LDE 296
PD L++ +PE + S D+WS GVLL+ + S G SP+ +DE
Sbjct: 202 --PDXVRKGDARLPLKWMAPETIFDRVYTIQS-DVWSFGVLLWEIFSLGASPYPGVKIDE 258
Query: 297 S-----EEETRAHISVADYSFP 313
+E TR + DY+ P
Sbjct: 259 EFCRRLKEGTR--MRAPDYTTP 278
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 66/142 (46%), Gaps = 26/142 (18%)
Query: 193 QSTITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXX 251
+ +T ++ C Q+ + L S++ H+D+ NIL++ V+K+ D G
Sbjct: 142 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD 201
Query: 252 XLPD----------LEFASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPF----LDE 296
PD L++ +PE + S D+WS GVLL+ + S G SP+ +DE
Sbjct: 202 --PDXVRKGDARLPLKWMAPETIFDRVYTIQS-DVWSFGVLLWEIFSLGASPYPGVKIDE 258
Query: 297 S-----EEETRAHISVADYSFP 313
+E TR + DY+ P
Sbjct: 259 EFCRRLKEGTR--MRAPDYTTP 278
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 66/142 (46%), Gaps = 26/142 (18%)
Query: 193 QSTITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXX 251
+ +T ++ C Q+ + L S++ H+D+ NIL++ V+K+ D G
Sbjct: 142 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD 201
Query: 252 XLPD----------LEFASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPF----LDE 296
PD L++ +PE + S D+WS GVLL+ + S G SP+ +DE
Sbjct: 202 --PDXVRKGDARLPLKWMAPETIFDRVYTIQS-DVWSFGVLLWEIFSLGASPYPGVKIDE 258
Query: 297 S-----EEETRAHISVADYSFP 313
+E TR + DY+ P
Sbjct: 259 EFCRRLKEGTR--MRAPDYTTP 278
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 13/104 (12%)
Query: 201 ICCIIRQLHSALHCLHSQQIAHKDIRPENILM-NGAVLKLIDLGXXXXXXX--------- 250
+ C Q+ + L + H+D+ N+L+ +G V+K+ D G
Sbjct: 174 LLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGN 233
Query: 251 XXLPDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPF 293
LP +++ +PE L S D+WS G+LL+ + S GV+P+
Sbjct: 234 ARLP-VKWMAPESLFEGIYTIKS-DVWSYGILLWEIFSLGVNPY 275
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 86/209 (41%), Gaps = 26/209 (12%)
Query: 106 ERLGNGRFCTVRKARDRGTGQLVALKQI---PRERQPQQITR-----AEYNLLSTLMHAH 157
+++G G F V K R +VA+K + E + + I + E ++S L H +
Sbjct: 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPN 84
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQS-TITESYICCIIRQLHSALHCLH 216
I L N P +VM+ V L L ++ I S ++ + + +
Sbjct: 85 IVKLYGLMHNPP-----RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 217 SQQ--IAHKDIRPENILM-----NGAV-LKLIDLGXXXXXX---XXXLPDLEFASPEMLT 265
+Q I H+D+R NI + N V K+ D L + ++ +PE +
Sbjct: 140 NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLLGNFQWMAPETIG 199
Query: 266 SPATA-GPSTDMWSLGVLLYILLSGVSPF 293
+ + D +S ++LY +L+G PF
Sbjct: 200 AEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 74/151 (49%), Gaps = 13/151 (8%)
Query: 100 HRYEELERLGNGRFCTVRKARDRGTGQLVALK-QIPRERQPQQITRAEYNLLSTLMHAHI 158
++Y ++G+G F + + +G+ VA+K + + + PQ +++ +M +
Sbjct: 9 NKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKF---YKMMQGGV 65
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESL--IQHLCRQSTITESYICCIIRQLHSALHCLH 216
+ A + +VM+L+ G SL + + C + ++ + + Q+ S + +H
Sbjct: 66 GIPSIKWCGAE-GDYNVMVMELL-GPSLEDLFNFCSRKFSLKT-VLLLADQMISRIEYIH 122
Query: 217 SQQIAHKDIRPENILMN----GAVLKLIDLG 243
S+ H+D++P+N LM G ++ +ID G
Sbjct: 123 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFG 153
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 101/256 (39%), Gaps = 25/256 (9%)
Query: 81 YKVLYTVPFETRWQQEQFEHRYEELE--RLGNGRFCTVRKA-----RDRGTGQLVALKQI 133
Y+ Y P E R ++ + + LE LG+G F TV+K + T + LK
Sbjct: 349 YESPYADPEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNE 408
Query: 134 PRERQPQQITRAEYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQ 193
+ + AE N++ L + +I + + E + +VM++ L ++L +
Sbjct: 409 ANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE----SWMLVMEMAELGPLNKYLQQN 464
Query: 194 STITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILM-NGAVLKLIDLG--------- 243
+ + I ++ Q+ + L H+D+ N+L+ K+ D G
Sbjct: 465 RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 524
Query: 244 -XXXXXXXXXLPDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPFLDESEEET 301
P +++ +PE + + S D+WS GVL++ S G P+ E
Sbjct: 525 NYYKAQTHGKWP-VKWYAPECINYYKFSSKS-DVWSFGVLMWEAFSYGQKPYRGMKGSEV 582
Query: 302 RAHISVADYSFPPEQC 317
A + + P C
Sbjct: 583 TAMLEKGERMGCPAGC 598
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 67/151 (44%), Gaps = 15/151 (9%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMH-AHIPT 160
Y+ R+G G F + + + Q VA+K PR Q+ R EY L IP
Sbjct: 11 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQL-RDEYRTYKLLAGCTGIPN 69
Query: 161 ALALFENAPVPGTDTIVMQLVHGESL--IQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
+ G +++ + G SL + LC + ++ + +Q+ + + +H +
Sbjct: 70 VYYFGQE----GLHNVLVIDLLGPSLEDLLDLCGRKFSVKT-VAMAAKQMLARVQSIHEK 124
Query: 219 QIAHKDIRPENILM------NGAVLKLIDLG 243
+ ++DI+P+N L+ N ++ ++D G
Sbjct: 125 SLVYRDIKPDNFLIGRPNSKNANMIYVVDFG 155
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 67/151 (44%), Gaps = 15/151 (9%)
Query: 102 YEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMH-AHIPT 160
Y+ R+G G F + + + Q VA+K PR Q+ R EY L IP
Sbjct: 12 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQL-RDEYRTYKLLAGCTGIPN 70
Query: 161 ALALFENAPVPGTDTIVMQLVHGESL--IQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
+ G +++ + G SL + LC + ++ + +Q+ + + +H +
Sbjct: 71 VYYFGQE----GLHNVLVIDLLGPSLEDLLDLCGRKFSVKT-VAMAAKQMLARVQSIHEK 125
Query: 219 QIAHKDIRPENILM------NGAVLKLIDLG 243
+ ++DI+P+N L+ N ++ ++D G
Sbjct: 126 SLVYRDIKPDNFLIGRPNSKNANMIYVVDFG 156
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 45/108 (41%), Gaps = 19/108 (17%)
Query: 256 LEFASPEMLTSPATAGP-------------STDMWSLGVLLYILLSGVSPFLDESEEETR 302
F SP + +PA P S DMWS VLL+ L++ PF D S E
Sbjct: 161 FSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIG 220
Query: 303 AHISVADY--SFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV 348
+++ + PP H+S +L+ +N KRP ++ +
Sbjct: 221 MKVALEGLRPTIPPGISPHVS----KLMKICMNEDPAKRPKFDMIVPI 264
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 103/256 (40%), Gaps = 21/256 (8%)
Query: 105 LERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTALAL 164
+++LG G+F V + + VA+K + Q E NL+ TL H + A+
Sbjct: 17 VKKLGAGQFGEVWMGYYNNSTK-VAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAV 75
Query: 165 F-ENAPVPGTDTIVMQLVHGESLIQHLCRQ--STITESYICCIIRQLHSALHCLHSQQIA 221
+ P+ I+ + + SL+ L + + Q+ + + +
Sbjct: 76 VTKEEPI----YIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYI 131
Query: 222 HKDIRPENILMNGAVL-KLIDLGXXXXXXXXXLPDLEFAS-PEMLTSPATAG-----PST 274
H+D+R N+L++ +++ K+ D G E A P T+P +
Sbjct: 132 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKS 191
Query: 275 DMWSLGVLLY-ILLSGVSPFLDESEEETRAHISVADYSFPP-EQCGHISVPARELIGQLL 332
++WS G+LLY I+ G P+ + + + +S Y P E C +++
Sbjct: 192 NVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQG-YRMPRMENCPD---ELYDIMKMCW 247
Query: 333 NTHADKRPTAGQLLQV 348
A++RPT L V
Sbjct: 248 KEKAEERPTFDYLQSV 263
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 66/158 (41%), Gaps = 21/158 (13%)
Query: 176 IVMQLVHGESLIQHLCR-QSTITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILMN- 233
IV + + SL L + + T + ++R + S + L H+D+ NIL+N
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINS 182
Query: 234 GAVLKLIDLG----------XXXXXXXXXLPDLEFASPEMLTSPATAGPSTDMWSLGVLL 283
V K+ D G +P + + SPE + S D+WS G++L
Sbjct: 183 NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP-IRWTSPEAIAYRKFTSAS-DVWSYGIVL 240
Query: 284 YILLS-GVSPFLDESEEETRAHISVADYSF---PPEQC 317
+ ++S G P+ + S ++ I D + PP C
Sbjct: 241 WEVMSYGERPYWEMSNQDV---IKAVDEGYRLPPPMDC 275
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 106/267 (39%), Gaps = 29/267 (10%)
Query: 105 LERLGNGRFCTVRKA----RDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPT 160
++ +G+G+F V +D+ VA+K I ++ E ++ L H +
Sbjct: 12 VQEIGSGQFGLVHLGYWLNKDK-----VAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQ 66
Query: 161 ALAL-FENAPVPGTDTIVMQLVHGESLIQHL-CRQSTITESYICCIIRQLHSALHCLHSQ 218
+ E AP+ +V + + L +L ++ + + + + L
Sbjct: 67 LYGVCLEQAPI----CLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 122
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLPD-------LEFASPEMLTSPATA 270
+ H+D+ N L+ V+K+ D G +++ASPE+ + +
Sbjct: 123 CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS 182
Query: 271 GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIG 329
S D+WS GVL++ + S G P+ + S E IS + P S +++
Sbjct: 183 SKS-DVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLA---STHVYQIMN 238
Query: 330 QLLNTHADKRPTAGQLL-QVAWFAEAS 355
+ RP +LL Q+A AE+
Sbjct: 239 HCWKERPEDRPAFSRLLRQLAEIAESG 265
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 101/260 (38%), Gaps = 33/260 (12%)
Query: 81 YKVLYTVPFETRWQQEQFEHRYEELE--RLGNGRFCTVRKARDRGTGQLVA--------- 129
Y+ Y P E R ++ + + LE LG+G F TV+K G Q+
Sbjct: 6 YESPYADPEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKK----GYYQMKKVVKTVAVKI 61
Query: 130 LKQIPRERQPQQITRAEYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQH 189
LK + + AE N++ L + +I + + E + +VM++ L ++
Sbjct: 62 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE----SWMLVMEMAELGPLNKY 117
Query: 190 LCRQSTITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILM-NGAVLKLIDLGXXXXX 248
L + + + I ++ Q+ + L H+D+ N+L+ K+ D G
Sbjct: 118 LQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 177
Query: 249 XXX----------XLPDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPFLDES 297
P +++ +PE + + S D+WS GVL++ S G P+
Sbjct: 178 RADENYYKAQTHGKWP-VKWYAPECINYYKFSSKS-DVWSFGVLMWEAFSYGQKPYRGMK 235
Query: 298 EEETRAHISVADYSFPPEQC 317
E A + + P C
Sbjct: 236 GSEVTAMLEKGERMGCPAGC 255
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 101/260 (38%), Gaps = 33/260 (12%)
Query: 81 YKVLYTVPFETRWQQEQFEHRYEELE--RLGNGRFCTVRKARDRGTGQLVA--------- 129
Y+ Y P E R ++ + + LE LG+G F TV+K G Q+
Sbjct: 6 YESPYADPEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKK----GYYQMKKVVKTVAVKI 61
Query: 130 LKQIPRERQPQQITRAEYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQH 189
LK + + AE N++ L + +I + + E + +VM++ L ++
Sbjct: 62 LKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE----SWMLVMEMAELGPLNKY 117
Query: 190 LCRQSTITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILM-NGAVLKLIDLGXXXXX 248
L + + + I ++ Q+ + L H+D+ N+L+ K+ D G
Sbjct: 118 LQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 177
Query: 249 XXX----------XLPDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPFLDES 297
P +++ +PE + + S D+WS GVL++ S G P+
Sbjct: 178 RADENYYKAQTHGKWP-VKWYAPECINYYKFSSKS-DVWSFGVLMWEAFSYGQKPYRGMK 235
Query: 298 EEETRAHISVADYSFPPEQC 317
E A + + P C
Sbjct: 236 GSEVTAMLEKGERMGCPAGC 255
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 106/267 (39%), Gaps = 29/267 (10%)
Query: 105 LERLGNGRFCTVRKA----RDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPT 160
++ +G+G+F V +D+ VA+K I ++ E ++ L H +
Sbjct: 10 VQEIGSGQFGLVHLGYWLNKDK-----VAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQ 64
Query: 161 ALAL-FENAPVPGTDTIVMQLVHGESLIQHL-CRQSTITESYICCIIRQLHSALHCLHSQ 218
+ E AP+ +V + + L +L ++ + + + + L
Sbjct: 65 LYGVCLEQAPI----CLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 120
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLPD-------LEFASPEMLTSPATA 270
+ H+D+ N L+ V+K+ D G +++ASPE+ + +
Sbjct: 121 CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS 180
Query: 271 GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIG 329
S D+WS GVL++ + S G P+ + S E IS + P S +++
Sbjct: 181 SKS-DVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLA---STHVYQIMN 236
Query: 330 QLLNTHADKRPTAGQLL-QVAWFAEAS 355
+ RP +LL Q+A AE+
Sbjct: 237 HCWKERPEDRPAFSRLLRQLAEIAESG 263
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 107/258 (41%), Gaps = 48/258 (18%)
Query: 70 GHTYTFCINNEYKVLYTVPFETRWQQEQFEHRYEELERLGNGRFCTVRKARDRGTGQ--- 126
G++YTF + +P+ +W+ + ++ + LG G F V +A G G+
Sbjct: 24 GNSYTFIDPTQ------LPYNEKWEFPRNNLQFGK--TLGAGAFGKVVEATAFGLGKEDA 75
Query: 127 --LVALKQIPRERQP--QQITRAEYNLLSTL-MHAHIPTAL-ALFENAPVPGTDTIVMQL 180
VA+K + ++ +E ++S L H +I L A PV ++ +
Sbjct: 76 VLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPV----LVITEY 131
Query: 181 VHGESLIQHLCRQSTITESYICCII--------------RQLHSALHCLHSQQIAHKDIR 226
L+ L R+S + E+ I Q+ + L S+ H+D+
Sbjct: 132 CCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVA 191
Query: 227 PENILM-NGAVLKLIDLGXXX---------XXXXXXLPDLEFASPEMLTSPATAGPSTDM 276
N+L+ NG V K+ D G LP +++ +PE + +D+
Sbjct: 192 ARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP-VKWMAPESIFD-CVYTVQSDV 249
Query: 277 WSLGVLLYILLS-GVSPF 293
WS G+LL+ + S G++P+
Sbjct: 250 WSYGILLWEIFSLGLNPY 267
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 105/267 (39%), Gaps = 29/267 (10%)
Query: 105 LERLGNGRFCTVRKA----RDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPT 160
++ +G+G+F V +D+ VA+K I + E ++ L H +
Sbjct: 32 VQEIGSGQFGLVHLGYWLNKDK-----VAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQ 86
Query: 161 ALAL-FENAPVPGTDTIVMQLVHGESLIQHL-CRQSTITESYICCIIRQLHSALHCLHSQ 218
+ E AP+ +V + + L +L ++ + + + + L
Sbjct: 87 LYGVCLEQAPI----CLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 142
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLPD-------LEFASPEMLTSPATA 270
+ H+D+ N L+ V+K+ D G +++ASPE+ + +
Sbjct: 143 CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS 202
Query: 271 GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIG 329
S D+WS GVL++ + S G P+ + S E IS + P S +++
Sbjct: 203 SKS-DVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLA---STHVYQIMN 258
Query: 330 QLLNTHADKRPTAGQLL-QVAWFAEAS 355
+ RP +LL Q+A AE+
Sbjct: 259 HCWKERPEDRPAFSRLLRQLAEIAESG 285
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 107/258 (41%), Gaps = 48/258 (18%)
Query: 70 GHTYTFCINNEYKVLYTVPFETRWQQEQFEHRYEELERLGNGRFCTVRKARDRGTGQ--- 126
G++YTF + +P+ +W+ + ++ + LG G F V +A G G+
Sbjct: 24 GNSYTFIDPTQ------LPYNEKWEFPRNNLQFGK--TLGAGAFGKVVEATAFGLGKEDA 75
Query: 127 --LVALKQIPRERQP--QQITRAEYNLLSTL-MHAHIPTAL-ALFENAPVPGTDTIVMQL 180
VA+K + ++ +E ++S L H +I L A PV ++ +
Sbjct: 76 VLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPV----LVITEY 131
Query: 181 VHGESLIQHLCRQSTITESYICCII--------------RQLHSALHCLHSQQIAHKDIR 226
L+ L R+S + E+ I Q+ + L S+ H+D+
Sbjct: 132 CCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVA 191
Query: 227 PENILM-NGAVLKLIDLGXXX---------XXXXXXLPDLEFASPEMLTSPATAGPSTDM 276
N+L+ NG V K+ D G LP +++ +PE + +D+
Sbjct: 192 ARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP-VKWMAPESIFD-CVYTVQSDV 249
Query: 277 WSLGVLLYILLS-GVSPF 293
WS G+LL+ + S G++P+
Sbjct: 250 WSYGILLWEIFSLGLNPY 267
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 54/256 (21%), Positives = 99/256 (38%), Gaps = 33/256 (12%)
Query: 85 YTVPFETRWQQEQFEHRYEELE--RLGNGRFCTVRKARDRGTGQLVA---------LKQI 133
Y P E R ++ + + LE LG+G F TV+K G Q+ LK
Sbjct: 8 YADPEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKK----GYYQMKKVVKTVAVKILKNE 63
Query: 134 PRERQPQQITRAEYNLLSTLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQ 193
+ + AE N++ L + +I + + E + +VM++ L ++L +
Sbjct: 64 ANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE----SWMLVMEMAELGPLNKYLQQN 119
Query: 194 STITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILM-NGAVLKLIDLGXXXXXXXX- 251
+ + I ++ Q+ + L H+D+ N+L+ K+ D G
Sbjct: 120 RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADE 179
Query: 252 ---------XLPDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPFLDESEEET 301
P +++ +PE + + S D+WS GVL++ S G P+ E
Sbjct: 180 NYYKAQTHGKWP-VKWYAPECINYYKFSSKS-DVWSFGVLMWEAFSYGQKPYRGMKGSEV 237
Query: 302 RAHISVADYSFPPEQC 317
A + + P C
Sbjct: 238 TAMLEKGERMGCPAGC 253
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 55/267 (20%), Positives = 106/267 (39%), Gaps = 29/267 (10%)
Query: 105 LERLGNGRFCTVRKA----RDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPT 160
++ +G+G+F V +D+ VA+K I ++ E ++ L H +
Sbjct: 15 VQEIGSGQFGLVHLGYWLNKDK-----VAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQ 69
Query: 161 ALAL-FENAPVPGTDTIVMQLVHGESLIQHL-CRQSTITESYICCIIRQLHSALHCLHSQ 218
+ E AP+ +V + + L +L ++ + + + + L
Sbjct: 70 LYGVCLEQAPI----CLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 125
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLPD-------LEFASPEMLTSPATA 270
+ H+D+ N L+ V+K+ D G +++ASPE+ + +
Sbjct: 126 CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS 185
Query: 271 GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIG 329
S D+WS GVL++ + S G P+ + S E IS + P S +++
Sbjct: 186 SKS-DVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLA---STHVYQIMN 241
Query: 330 QLLNTHADKRPTAGQLL-QVAWFAEAS 355
+ RP +LL Q+A AE+
Sbjct: 242 HCWRERPEDRPAFSRLLRQLAEIAESG 268
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 51/258 (19%), Positives = 101/258 (39%), Gaps = 28/258 (10%)
Query: 105 LERLGNGRFCTVRKA----RDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPT 160
++ +G+G+F V +D+ VA+K I ++ E ++ L H +
Sbjct: 12 VQEIGSGQFGLVHLGYWLNKDK-----VAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQ 66
Query: 161 ALAL-FENAPVPGTDTIVMQLVHGESLIQHL-CRQSTITESYICCIIRQLHSALHCLHSQ 218
+ E AP+ +V + + L +L ++ + + + + L
Sbjct: 67 LYGVCLEQAPI----CLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 122
Query: 219 QIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLPD-------LEFASPEMLTSPATA 270
+ H+D+ N L+ V+K+ D G +++ASPE+ + +
Sbjct: 123 SVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS 182
Query: 271 GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIG 329
S D+WS GVL++ + S G P+ + S E IS + P S +++
Sbjct: 183 SKS-DVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLA---STHVYQIMN 238
Query: 330 QLLNTHADKRPTAGQLLQ 347
+ RP +LL+
Sbjct: 239 HCWKERPEDRPAFSRLLR 256
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 62/146 (42%), Gaps = 14/146 (9%)
Query: 220 IAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLPD-------LEFASPEMLTSPATAG 271
+ H+D+ N L+ V+K+ D G +++ASPE+ + +
Sbjct: 125 VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSS 184
Query: 272 PSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQCGHISVPARELIGQ 330
S D+WS GVL++ + S G P+ + S E IS + P S +++
Sbjct: 185 KS-DVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLA---STHVYQIMNH 240
Query: 331 LLNTHADKRPTAGQLL-QVAWFAEAS 355
+ RP +LL Q+A AE+
Sbjct: 241 CWRERPEDRPAFSRLLRQLAEIAESG 266
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 98/247 (39%), Gaps = 22/247 (8%)
Query: 107 RLGNGRFCTVRKARDRGTGQLVALKQI-PRERQPQQITRAEYNLLSTLMHAHIPTALALF 165
+LG G F V GT + VA+K + P P+ + E ++ L H + A+
Sbjct: 22 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQ-EAQVMKKLRHEKLVQLYAVV 79
Query: 166 ENAPVPGTDTIVMQLVHGESLIQHLCRQST--ITESYICCIIRQLHSALHCLHSQQIAHK 223
P+ IV + ++ SL+ L ++ + + + Q+ S + + H+
Sbjct: 80 SEEPI----YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHR 135
Query: 224 DIRPENILMN-GAVLKLIDLGXXXXXXXXXLPDLEFAS-PEMLTSPATA-----GPSTDM 276
D+R NIL+ V K+ D G + A P T+P A +D+
Sbjct: 136 DLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDV 195
Query: 277 WSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP-PEQCGHISVPARELIGQLLNT 334
WS G+LL L + G P+ E + Y P P +C +L+ Q
Sbjct: 196 WSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPPECPE---SLHDLMCQCWRK 251
Query: 335 HADKRPT 341
++RPT
Sbjct: 252 EPEERPT 258
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 97/247 (39%), Gaps = 22/247 (8%)
Query: 107 RLGNGRFCTVRKARDRGTGQLVALKQI-PRERQPQQITRAEYNLLSTLMHAHIPTALALF 165
+LG G F V GT + VA+K + P P+ + E ++ L H + A+
Sbjct: 15 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQ-EAQVMKKLRHEKLVQLYAVV 72
Query: 166 ENAPVPGTDTIVMQLVHGESLIQHLCRQST--ITESYICCIIRQLHSALHCLHSQQIAHK 223
P+ IV + + SL+ L ++ + + + Q+ S + + H+
Sbjct: 73 SEEPI----XIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 128
Query: 224 DIRPENILMN-GAVLKLIDLGXXXXXXXXXLPDLEFAS-PEMLTSPATA-----GPSTDM 276
D+R NIL+ V K+ D G + A P T+P A +D+
Sbjct: 129 DLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDV 188
Query: 277 WSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP-PEQCGHISVPARELIGQLLNT 334
WS G+LL L + G P+ E + Y P P +C +L+ Q
Sbjct: 189 WSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPPECPE---SLHDLMCQCWRK 244
Query: 335 HADKRPT 341
++RPT
Sbjct: 245 EPEERPT 251
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 93/228 (40%), Gaps = 25/228 (10%)
Query: 108 LGNGRFCTVRKARDRGTGQLV-----ALKQIPRERQPQQITRAEYNLLSTLMHAHIPTAL 162
LG G F +VR+ R + + LKQ + +++ R E ++ L + +I +
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMR-EAQIMHQLDNPYIVRLI 76
Query: 163 ALFENAPVPGTDTIVMQLVHGESLIQHLC-RQSTITESYICCIIRQLHSALHCLHSQQIA 221
+ + + +VM++ G L + L ++ I S + ++ Q+ + L +
Sbjct: 77 GVCQAEAL----MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFV 132
Query: 222 HKDIRPENILM-NGAVLKLIDLGXXX----------XXXXXXLPDLEFASPEMLTSPATA 270
H+D+ N+L+ N K+ D G P L++ +PE + +
Sbjct: 133 HRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWP-LKWYAPECINFRKFS 191
Query: 271 GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQC 317
S D+WS GV ++ LS G P+ E A I P +C
Sbjct: 192 SRS-DVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPEC 238
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 66/158 (41%), Gaps = 21/158 (13%)
Query: 176 IVMQLVHGESLIQHLCR-QSTITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILMN- 233
IV + + SL L + + T + ++R + S + L H+D+ NIL+N
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS 182
Query: 234 GAVLKLIDLG----------XXXXXXXXXLPDLEFASPEMLTSPATAGPSTDMWSLGVLL 283
V K+ D G +P + + SPE + S D+WS G++L
Sbjct: 183 NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP-IRWTSPEAIAYRKFTSAS-DVWSYGIVL 240
Query: 284 YILLS-GVSPFLDESEEETRAHISVADYSF---PPEQC 317
+ ++S G P+ + S ++ I D + PP C
Sbjct: 241 WEVMSYGERPYWEMSNQDV---IKAVDEGYRLPPPMDC 275
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 66/158 (41%), Gaps = 21/158 (13%)
Query: 176 IVMQLVHGESLIQHLCR-QSTITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILMNG 234
IV + + SL L + + T + ++R + S + L H+D+ NIL+N
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS 182
Query: 235 A-VLKLIDLG----------XXXXXXXXXLPDLEFASPEMLTSPATAGPSTDMWSLGVLL 283
V K+ D G +P + + SPE + S D+WS G++L
Sbjct: 183 NLVCKVSDFGLARVLEDDPEAAYTTRGGKIP-IRWTSPEAIAYRKFTSAS-DVWSYGIVL 240
Query: 284 YILLS-GVSPFLDESEEETRAHISVADYSF---PPEQC 317
+ ++S G P+ + S ++ I D + PP C
Sbjct: 241 WEVMSYGERPYWEMSNQDV---IKAVDEGYRLPPPMDC 275
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 98/247 (39%), Gaps = 22/247 (8%)
Query: 107 RLGNGRFCTVRKARDRGTGQLVALKQI-PRERQPQQITRAEYNLLSTLMHAHIPTALALF 165
+LG G F V GT + VA+K + P P+ + E ++ L H + A+
Sbjct: 22 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQ-EAQVMKKLRHEKLVQLYAVV 79
Query: 166 ENAPVPGTDTIVMQLVHGESLIQHLCRQST--ITESYICCIIRQLHSALHCLHSQQIAHK 223
P+ IV + ++ SL+ L ++ + + + Q+ S + + H+
Sbjct: 80 SEEPI----YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHR 135
Query: 224 DIRPENILMN-GAVLKLIDLGXXXXXXXXXLPDLEFAS-PEMLTSPATA-----GPSTDM 276
D+R NIL+ V K+ D G + A P T+P A +D+
Sbjct: 136 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 195
Query: 277 WSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP-PEQCGHISVPARELIGQLLNT 334
WS G+LL L + G P+ E + Y P P +C +L+ Q
Sbjct: 196 WSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPPECPE---SLHDLMCQCWRK 251
Query: 335 HADKRPT 341
++RPT
Sbjct: 252 EPEERPT 258
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 66/158 (41%), Gaps = 21/158 (13%)
Query: 176 IVMQLVHGESLIQHLCR-QSTITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILMN- 233
IV + + SL L + + T + ++R + S + L H+D+ NIL+N
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS 182
Query: 234 GAVLKLIDLG----------XXXXXXXXXLPDLEFASPEMLTSPATAGPSTDMWSLGVLL 283
V K+ D G +P + + SPE + S D+WS G++L
Sbjct: 183 NLVCKVSDFGLGRVLEDDPEAAYTTRGGKIP-IRWTSPEAIAYRKFTSAS-DVWSYGIVL 240
Query: 284 YILLS-GVSPFLDESEEETRAHISVADYSF---PPEQC 317
+ ++S G P+ + S ++ I D + PP C
Sbjct: 241 WEVMSYGERPYWEMSNQDV---IKAVDEGYRLPPPMDC 275
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 66/158 (41%), Gaps = 21/158 (13%)
Query: 176 IVMQLVHGESLIQHLCR-QSTITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILMN- 233
IV + + SL L + + T + ++R + S + L H+D+ NIL+N
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS 182
Query: 234 GAVLKLIDLG----------XXXXXXXXXLPDLEFASPEMLTSPATAGPSTDMWSLGVLL 283
V K+ D G +P + + SPE + S D+WS G++L
Sbjct: 183 NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP-IRWTSPEAIAYRKFTSAS-DVWSYGIVL 240
Query: 284 YILLS-GVSPFLDESEEETRAHISVADYSF---PPEQC 317
+ ++S G P+ + S ++ I D + PP C
Sbjct: 241 WEVMSYGERPYWEMSNQDV---IKAVDEGYRLPPPMDC 275
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 66/158 (41%), Gaps = 21/158 (13%)
Query: 176 IVMQLVHGESLIQHLCR-QSTITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILMN- 233
IV + + SL L + + T + ++R + S + L H+D+ NIL+N
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS 182
Query: 234 GAVLKLIDLG----------XXXXXXXXXLPDLEFASPEMLTSPATAGPSTDMWSLGVLL 283
V K+ D G +P + + SPE + S D+WS G++L
Sbjct: 183 NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP-IRWTSPEAIAYRKFTSAS-DVWSYGIVL 240
Query: 284 YILLS-GVSPFLDESEEETRAHISVADYSF---PPEQC 317
+ ++S G P+ + S ++ I D + PP C
Sbjct: 241 WEVMSYGERPYWEMSNQDV---IKAVDEGYRLPPPMDC 275
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 91/231 (39%), Gaps = 23/231 (9%)
Query: 104 ELERLGNGRFCTVRKA-----RDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHI 158
E + LG+G F TV+K + T + LK + + AE N++ L + +I
Sbjct: 373 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 432
Query: 159 PTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ 218
+ + E + +VM++ L ++L + + + I ++ Q+ + L
Sbjct: 433 VRMIGICEAE----SWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES 488
Query: 219 QIAHKDIRPENILM-NGAVLKLIDLG----------XXXXXXXXXLPDLEFASPEMLTSP 267
H+D+ N+L+ K+ D G P +++ +PE +
Sbjct: 489 NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP-VKWYAPECINYY 547
Query: 268 ATAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQC 317
+ S D+WS GVL++ S G P+ E A + + P C
Sbjct: 548 KFSSKS-DVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGC 597
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 97/247 (39%), Gaps = 22/247 (8%)
Query: 107 RLGNGRFCTVRKARDRGTGQLVALKQI-PRERQPQQITRAEYNLLSTLMHAHIPTALALF 165
+LG G F V GT + VA+K + P P+ + E ++ L H + A+
Sbjct: 18 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQ-EAQVMKKLRHEKLVQLYAVV 75
Query: 166 ENAPVPGTDTIVMQLVHGESLIQHLCRQST--ITESYICCIIRQLHSALHCLHSQQIAHK 223
P+ IV + + SL+ L ++ + + + Q+ S + + H+
Sbjct: 76 SEEPI----YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 131
Query: 224 DIRPENILMN-GAVLKLIDLGXXXXXXXXXLPDLEFAS-PEMLTSPATA-----GPSTDM 276
D+R NIL+ V K+ D G + A P T+P A +D+
Sbjct: 132 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 191
Query: 277 WSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP-PEQCGHISVPARELIGQLLNT 334
WS G+LL L + G P+ E + Y P P +C +L+ Q
Sbjct: 192 WSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPPECPE---SLHDLMCQCWRK 247
Query: 335 HADKRPT 341
++RPT
Sbjct: 248 EPEERPT 254
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 66/158 (41%), Gaps = 21/158 (13%)
Query: 176 IVMQLVHGESLIQHLCR-QSTITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILMN- 233
IV + + SL L + + T + ++R + S + L H+D+ NIL+N
Sbjct: 123 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS 182
Query: 234 GAVLKLIDLG----------XXXXXXXXXLPDLEFASPEMLTSPATAGPSTDMWSLGVLL 283
V K+ D G +P + + SPE + S D+WS G++L
Sbjct: 183 NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP-IRWTSPEAIAYRKFTSAS-DVWSYGIVL 240
Query: 284 YILLS-GVSPFLDESEEETRAHISVADYSF---PPEQC 317
+ ++S G P+ + S ++ I D + PP C
Sbjct: 241 WEVMSYGERPYWEMSNQDV---IKAVDEGYRLPPPMDC 275
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 66/158 (41%), Gaps = 21/158 (13%)
Query: 176 IVMQLVHGESLIQHLCR-QSTITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILMNG 234
IV + + SL L + + T + ++R + S + L H+D+ NIL+N
Sbjct: 121 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS 180
Query: 235 A-VLKLIDLG----------XXXXXXXXXLPDLEFASPEMLTSPATAGPSTDMWSLGVLL 283
V K+ D G +P + + SPE + S D+WS G++L
Sbjct: 181 NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP-IRWTSPEAIAYRKFTSAS-DVWSYGIVL 238
Query: 284 YILLS-GVSPFLDESEEETRAHISVADYSF---PPEQC 317
+ ++S G P+ + S ++ I D + PP C
Sbjct: 239 WEVMSYGERPYWEMSNQDV---IKAVDEGYRLPPPMDC 273
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 66/158 (41%), Gaps = 21/158 (13%)
Query: 176 IVMQLVHGESLIQHLCR-QSTITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILMNG 234
IV + + SL L + + T + ++R + S + L H+D+ NIL+N
Sbjct: 123 IVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS 182
Query: 235 A-VLKLIDLG----------XXXXXXXXXLPDLEFASPEMLTSPATAGPSTDMWSLGVLL 283
V K+ D G +P + + SPE + S D+WS G++L
Sbjct: 183 NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP-IRWTSPEAIAYRKFTSAS-DVWSYGIVL 240
Query: 284 YILLS-GVSPFLDESEEETRAHISVADYSF---PPEQC 317
+ ++S G P+ + S ++ I D + PP C
Sbjct: 241 WEVMSYGERPYWEMSNQDV---IKAVDEGYRLPPPMDC 275
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 97/247 (39%), Gaps = 22/247 (8%)
Query: 107 RLGNGRFCTVRKARDRGTGQLVALKQI-PRERQPQQITRAEYNLLSTLMHAHIPTALALF 165
+LG G F V GT + VA+K + P P+ + E ++ L H + A+
Sbjct: 191 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQ-EAQVMKKLRHEKLVQLYAVV 248
Query: 166 ENAPVPGTDTIVMQLVHGESLIQHLCRQST--ITESYICCIIRQLHSALHCLHSQQIAHK 223
P+ IV + + SL+ L ++ + + + Q+ S + + H+
Sbjct: 249 SEEPI----YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 304
Query: 224 DIRPENILMN-GAVLKLIDLGXXXXXXXXXLPDLEFAS-PEMLTSPATA-----GPSTDM 276
D+R NIL+ V K+ D G + A P T+P A +D+
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 364
Query: 277 WSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP-PEQCGHISVPARELIGQLLNT 334
WS G+LL L + G P+ E + Y P P +C +L+ Q
Sbjct: 365 WSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPPECPE---SLHDLMCQCWRK 420
Query: 335 HADKRPT 341
++RPT
Sbjct: 421 EPEERPT 427
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 66/158 (41%), Gaps = 21/158 (13%)
Query: 176 IVMQLVHGESLIQHLCR-QSTITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILMN- 233
IV + + SL L + + T + ++R + S + L H+D+ NIL+N
Sbjct: 94 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS 153
Query: 234 GAVLKLIDLG----------XXXXXXXXXLPDLEFASPEMLTSPATAGPSTDMWSLGVLL 283
V K+ D G +P + + SPE + S D+WS G++L
Sbjct: 154 NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP-IRWTSPEAIAYRKFTSAS-DVWSYGIVL 211
Query: 284 YILLS-GVSPFLDESEEETRAHISVADYSF---PPEQC 317
+ ++S G P+ + S ++ I D + PP C
Sbjct: 212 WEVMSYGERPYWEMSNQDV---IKAVDEGYRLPPPMDC 246
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 66/158 (41%), Gaps = 21/158 (13%)
Query: 176 IVMQLVHGESLIQHLCR-QSTITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILMN- 233
IV + + SL L + + T + ++R + S + L H+D+ NIL+N
Sbjct: 111 IVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS 170
Query: 234 GAVLKLIDLG----------XXXXXXXXXLPDLEFASPEMLTSPATAGPSTDMWSLGVLL 283
V K+ D G +P + + SPE + S D+WS G++L
Sbjct: 171 NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP-IRWTSPEAIAYRKFTSAS-DVWSYGIVL 228
Query: 284 YILLS-GVSPFLDESEEETRAHISVADYSF---PPEQC 317
+ ++S G P+ + S ++ I D + PP C
Sbjct: 229 WEVMSYGERPYWEMSNQDV---IKAVDEGYRLPPPMDC 263
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 66/158 (41%), Gaps = 21/158 (13%)
Query: 176 IVMQLVHGESLIQHLCR-QSTITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILMNG 234
IV + + SL L + + T + ++R + S + L H+D+ NIL+N
Sbjct: 123 IVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILINS 182
Query: 235 A-VLKLIDLG----------XXXXXXXXXLPDLEFASPEMLTSPATAGPSTDMWSLGVLL 283
V K+ D G +P + + SPE + S D+WS G++L
Sbjct: 183 NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP-IRWTSPEAIAYRKFTSAS-DVWSYGIVL 240
Query: 284 YILLS-GVSPFLDESEEETRAHISVADYSF---PPEQC 317
+ ++S G P+ + S ++ I D + PP C
Sbjct: 241 WEVMSYGERPYWEMSNQDV---IKAVDEGYRLPPPMDC 275
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 97/247 (39%), Gaps = 22/247 (8%)
Query: 107 RLGNGRFCTVRKARDRGTGQLVALKQI-PRERQPQQITRAEYNLLSTLMHAHIPTALALF 165
+LG G F V GT + VA+K + P P+ + E ++ L H + A+
Sbjct: 25 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQ-EAQVMKKLRHEKLVQLYAVV 82
Query: 166 ENAPVPGTDTIVMQLVHGESLIQHLCRQ--STITESYICCIIRQLHSALHCLHSQQIAHK 223
P+ IV++ + SL+ L + + + + Q+ S + + H+
Sbjct: 83 SEEPI----YIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 224 DIRPENILMN-GAVLKLIDLGXXXXXXXXXLPDLEFAS-PEMLTSPATA-----GPSTDM 276
D+R NIL+ V K+ D G + A P T+P A +D+
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 277 WSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP-PEQCGHISVPARELIGQLLNT 334
WS G+LL L + G P+ E + Y P P +C +L+ Q
Sbjct: 199 WSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPPECPE---SLHDLMCQCWRK 254
Query: 335 HADKRPT 341
++RPT
Sbjct: 255 DPEERPT 261
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 66/158 (41%), Gaps = 21/158 (13%)
Query: 176 IVMQLVHGESLIQHLCR-QSTITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILMNG 234
IV + + SL L + + T + ++R + S + L H+D+ NIL+N
Sbjct: 94 IVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS 153
Query: 235 A-VLKLIDLG----------XXXXXXXXXLPDLEFASPEMLTSPATAGPSTDMWSLGVLL 283
V K+ D G +P + + SPE + S D+WS G++L
Sbjct: 154 NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIP-IRWTSPEAIAYRKFTSAS-DVWSYGIVL 211
Query: 284 YILLS-GVSPFLDESEEETRAHISVADYSF---PPEQC 317
+ ++S G P+ + S ++ I D + PP C
Sbjct: 212 WEVMSYGERPYWEMSNQDV---IKAVDEGYRLPPPMDC 246
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 97/247 (39%), Gaps = 22/247 (8%)
Query: 107 RLGNGRFCTVRKARDRGTGQLVALKQI-PRERQPQQITRAEYNLLSTLMHAHIPTALALF 165
+LG G F V GT + VA+K + P P+ + E ++ L H + A+
Sbjct: 191 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQ-EAQVMKKLRHEKLVQLYAVV 248
Query: 166 ENAPVPGTDTIVMQLVHGESLIQHLCRQST--ITESYICCIIRQLHSALHCLHSQQIAHK 223
P+ IV + + SL+ L ++ + + + Q+ S + + H+
Sbjct: 249 SEEPI----YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 304
Query: 224 DIRPENILMN-GAVLKLIDLGXXXXXXXXXLPDLEFAS-PEMLTSPATA-----GPSTDM 276
D+R NIL+ V K+ D G + A P T+P A +D+
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 364
Query: 277 WSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP-PEQCGHISVPARELIGQLLNT 334
WS G+LL L + G P+ E + Y P P +C +L+ Q
Sbjct: 365 WSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPPECPE---SLHDLMCQCWRK 420
Query: 335 HADKRPT 341
++RPT
Sbjct: 421 EPEERPT 427
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 91/235 (38%), Gaps = 31/235 (13%)
Query: 104 ELERLGNGRFCTVRKARDRGTGQLVA---------LKQIPRERQPQQITRAEYNLLSTLM 154
E + LG+G F TV+K G Q+ LK + + AE N++ L
Sbjct: 15 EDKELGSGNFGTVKK----GYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD 70
Query: 155 HAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHC 214
+ +I + + E + +VM++ L ++L + + + I ++ Q+ +
Sbjct: 71 NPYIVRMIGICE----AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 126
Query: 215 LHSQQIAHKDIRPENILM-NGAVLKLIDLGXXXXXXX----------XXLPDLEFASPEM 263
L H+D+ N+L+ K+ D G P +++ +PE
Sbjct: 127 LEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP-VKWYAPEC 185
Query: 264 LTSPATAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQC 317
+ + S D+WS GVL++ S G P+ E A + + P C
Sbjct: 186 INYYKFSSKS-DVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGC 239
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 97/247 (39%), Gaps = 22/247 (8%)
Query: 107 RLGNGRFCTVRKARDRGTGQLVALKQI-PRERQPQQITRAEYNLLSTLMHAHIPTALALF 165
+LG G F V GT + VA+K + P P+ + E ++ L H + A+
Sbjct: 25 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQ-EAQVMKKLRHEKLVQLYAVV 82
Query: 166 ENAPVPGTDTIVMQLVHGESLIQHLCRQ--STITESYICCIIRQLHSALHCLHSQQIAHK 223
P+ IV++ + SL+ L + + + + Q+ S + + H+
Sbjct: 83 SEEPI----YIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 224 DIRPENILMN-GAVLKLIDLGXXXXXXXXXLPDLEFAS-PEMLTSPATA-----GPSTDM 276
D+R NIL+ V K+ D G + A P T+P A +D+
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 277 WSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP-PEQCGHISVPARELIGQLLNT 334
WS G+LL L + G P+ E + Y P P +C +L+ Q
Sbjct: 199 WSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPPECPE---SLHDLMCQCWRK 254
Query: 335 HADKRPT 341
++RPT
Sbjct: 255 DPEERPT 261
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 91/235 (38%), Gaps = 31/235 (13%)
Query: 104 ELERLGNGRFCTVRKARDRGTGQLVA---------LKQIPRERQPQQITRAEYNLLSTLM 154
E + LG+G F TV+K G Q+ LK + + AE N++ L
Sbjct: 9 EDKELGSGNFGTVKK----GYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD 64
Query: 155 HAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHC 214
+ +I + + E + +VM++ L ++L + + + I ++ Q+ +
Sbjct: 65 NPYIVRMIGICE----AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 120
Query: 215 LHSQQIAHKDIRPENILM-NGAVLKLIDLGXXXXXXX----------XXLPDLEFASPEM 263
L H+D+ N+L+ K+ D G P +++ +PE
Sbjct: 121 LEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP-VKWYAPEC 179
Query: 264 LTSPATAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQC 317
+ + S D+WS GVL++ S G P+ E A + + P C
Sbjct: 180 INYYKFSSKS-DVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGC 233
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 91/235 (38%), Gaps = 31/235 (13%)
Query: 104 ELERLGNGRFCTVRKARDRGTGQLVA---------LKQIPRERQPQQITRAEYNLLSTLM 154
E + LG+G F TV+K G Q+ LK + + AE N++ L
Sbjct: 11 EDKELGSGNFGTVKK----GYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD 66
Query: 155 HAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHC 214
+ +I + + E + +VM++ L ++L + + + I ++ Q+ +
Sbjct: 67 NPYIVRMIGICE----AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 122
Query: 215 LHSQQIAHKDIRPENILM-NGAVLKLIDLGXXXXXXXX----------XLPDLEFASPEM 263
L H+D+ N+L+ K+ D G P +++ +PE
Sbjct: 123 LEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP-VKWYAPEC 181
Query: 264 LTSPATAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQC 317
+ + S D+WS GVL++ S G P+ E A + + P C
Sbjct: 182 INYYKFSSKS-DVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGC 235
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 91/235 (38%), Gaps = 31/235 (13%)
Query: 104 ELERLGNGRFCTVRKARDRGTGQLVA---------LKQIPRERQPQQITRAEYNLLSTLM 154
E + LG+G F TV+K G Q+ LK + + AE N++ L
Sbjct: 15 EDKELGSGNFGTVKK----GYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD 70
Query: 155 HAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHC 214
+ +I + + E + +VM++ L ++L + + + I ++ Q+ +
Sbjct: 71 NPYIVRMIGICEAE----SWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 126
Query: 215 LHSQQIAHKDIRPENILM-NGAVLKLIDLGXXXXXXX----------XXLPDLEFASPEM 263
L H+D+ N+L+ K+ D G P +++ +PE
Sbjct: 127 LEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWP-VKWYAPEC 185
Query: 264 LTSPATAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQC 317
+ + S D+WS GVL++ S G P+ E A + + P C
Sbjct: 186 INYYKFSSKS-DVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGC 239
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 101/246 (41%), Gaps = 46/246 (18%)
Query: 108 LGNGRFCTVRKARDRG-----TGQLVALKQIPRERQPQQITRAEYNLLSTLMH-AHIPTA 161
LG G F V +A G T + VA+K + +E RA + L L+H H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKML-KEGATHSEHRALMSELKILIHIGHHLNV 93
Query: 162 LALFENAPVPGTD-TIVMQLVHGESLIQHL------------CRQSTITESYICCIIRQL 208
+ L PG ++++ +L +L + +T ++ Q+
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQV 153
Query: 209 HSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLPD----------LE 257
+ L S++ H+D+ NIL++ V+K+ D G PD L+
Sbjct: 154 AKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKD--PDYVRKGDARLPLK 211
Query: 258 FASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPF----LDES-----EEETRAHISV 307
+ +PE + S D+WS GVLL+ + S G SP+ +DE +E TR +
Sbjct: 212 WMAPETIFDRVYTIQS-DVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLKEGTR--MRA 268
Query: 308 ADYSFP 313
DY+ P
Sbjct: 269 PDYTTP 274
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 84/210 (40%), Gaps = 30/210 (14%)
Query: 105 LERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLST--LMHAHIPTAL 162
LE GRF V KA+ VA+K P Q +Q ++E + ST + H ++ +
Sbjct: 20 LEIKARGRFGCVWKAQL--MNDFVAVKIFPL--QDKQSWQSEREIFSTPGMKHENLLQFI 75
Query: 163 ALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ---- 218
A + + ++ H + + + + IT + +C + + L LH
Sbjct: 76 AAEKRGSNLEVELWLITAFHDKGSLTDYLKGNIITWNELCHVAETMSRGLSYLHEDVPWC 135
Query: 219 -------QIAHKDIRPENILMNGAVLK-LIDLGXXXXXXXXXLPD--------LEFASPE 262
IAH+D + +N+L+ + L D G P + +PE
Sbjct: 136 RGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPE 195
Query: 263 MLTSPAT----AGPSTDMWSLGVLLYILLS 288
+L A DM+++G++L+ L+S
Sbjct: 196 VLEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 96/247 (38%), Gaps = 22/247 (8%)
Query: 107 RLGNGRFCTVRKARDRGTGQLVALKQI-PRERQPQQITRAEYNLLSTLMHAHIPTALALF 165
+LG G F V GT + VA+K + P P+ + E ++ L H + A+
Sbjct: 25 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQ-EAQVMKKLRHEKLVQLYAVV 82
Query: 166 ENAPVPGTDTIVMQLVHGESLIQHLCRQ--STITESYICCIIRQLHSALHCLHSQQIAHK 223
P+ IVM+ + L+ L + + + + Q+ S + + H+
Sbjct: 83 SEEPI----YIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 224 DIRPENILMN-GAVLKLIDLGXXXXXXXXXLPDLEFAS-PEMLTSPATA-----GPSTDM 276
D+R NIL+ V K+ D G + A P T+P A +D+
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 277 WSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP-PEQCGHISVPARELIGQLLNT 334
WS G+LL L + G P+ E + Y P P +C +L+ Q
Sbjct: 199 WSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPPECPE---SLHDLMCQCWRK 254
Query: 335 HADKRPT 341
++RPT
Sbjct: 255 DPEERPT 261
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 91/235 (38%), Gaps = 31/235 (13%)
Query: 104 ELERLGNGRFCTVRKARDRGTGQLVA---------LKQIPRERQPQQITRAEYNLLSTLM 154
E + LG+G F TV+K G Q+ LK + + AE N++ L
Sbjct: 21 EDKELGSGNFGTVKK----GYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD 76
Query: 155 HAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHC 214
+ +I + + E + +VM++ L ++L + + + I ++ Q+ +
Sbjct: 77 NPYIVRMIGICE----AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKY 132
Query: 215 LHSQQIAHKDIRPENILM-NGAVLKLIDLGXXXXXXX----------XXLPDLEFASPEM 263
L H+D+ N+L+ K+ D G P +++ +PE
Sbjct: 133 LEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWP-VKWYAPEC 191
Query: 264 LTSPATAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQC 317
+ + S D+WS GVL++ S G P+ E A + + P C
Sbjct: 192 INYYKFSSKS-DVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGC 245
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 93/246 (37%), Gaps = 20/246 (8%)
Query: 107 RLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTALALFE 166
+LG G F V GT ++ P P+ + E ++ L H + A+
Sbjct: 274 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQ-EAQVMKKLRHEKLVQLYAVVS 332
Query: 167 NAPVPGTDTIVMQLVHGESLIQHLCRQST--ITESYICCIIRQLHSALHCLHSQQIAHKD 224
P+ IV + + SL+ L ++ + + + Q+ S + + H+D
Sbjct: 333 EEPI----YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 388
Query: 225 IRPENILMN-GAVLKLIDLGXXXXXXXXXLPDLEFAS-PEMLTSPATA-----GPSTDMW 277
+R NIL+ V K+ D G + A P T+P A +D+W
Sbjct: 389 LRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 448
Query: 278 SLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP-PEQCGHISVPARELIGQLLNTH 335
S G+LL L + G P+ E + Y P P +C +L+ Q
Sbjct: 449 SFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPPECPE---SLHDLMCQCWRKE 504
Query: 336 ADKRPT 341
++RPT
Sbjct: 505 PEERPT 510
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 94/227 (41%), Gaps = 31/227 (13%)
Query: 105 LERLGNGRFCTVRKARDRGTG-----QLVALKQIPRERQP--QQITRAEYNLLSTLMHAH 157
+E LG RF V K G Q VA+K + + + ++ R E L + L H +
Sbjct: 14 MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPN 73
Query: 158 IPTALALF-ENAPVPGT----------DTIVMQLVHGE--SLIQHLCRQSTITESYICCI 204
+ L + ++ P+ + +VM+ H + S +S + +
Sbjct: 74 VVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHL 133
Query: 205 IRQLHSALHCLHSQQIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXX--------XLPD 255
+ Q+ + + L S + HKD+ N+L+ + +K+ DLG L
Sbjct: 134 VAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 193
Query: 256 LEFASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPFLDESEEET 301
+ + +PE + +D+WS GV+L+ + S G+ P+ S ++
Sbjct: 194 IRWMAPEAIMY-GKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDV 239
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 15/99 (15%)
Query: 207 QLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLPD---------- 255
Q+ + L S++ H+D+ NIL++ V+K+ D G PD
Sbjct: 207 QVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKN--PDYVRKGDTRLP 264
Query: 256 LEFASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPF 293
L++ +PE + + S D+WS GVLL+ + S G SP+
Sbjct: 265 LKWMAPESIFDKIYSTKS-DVWSYGVLLWEIFSLGGSPY 302
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 96/247 (38%), Gaps = 22/247 (8%)
Query: 107 RLGNGRFCTVRKARDRGTGQLVALKQI-PRERQPQQITRAEYNLLSTLMHAHIPTALALF 165
+LG G F V GT + VA+K + P P+ + E ++ L H + A+
Sbjct: 14 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQ-EAQVMKKLRHEKLVQLYAVV 71
Query: 166 ENAPVPGTDTIVMQLVHGESLIQHLCRQ--STITESYICCIIRQLHSALHCLHSQQIAHK 223
P+ IV + + SL+ L + + + + Q+ S + + H+
Sbjct: 72 SEEPI----YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 127
Query: 224 DIRPENILMN-GAVLKLIDLGXXXXXXXXXLPDLEFAS-PEMLTSPATA-----GPSTDM 276
D+R NIL+ V K+ D G + A P T+P A +D+
Sbjct: 128 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 187
Query: 277 WSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP-PEQCGHISVPARELIGQLLNT 334
WS G+LL L + G P+ E + Y P P +C +L+ Q
Sbjct: 188 WSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPPECPE---SLHDLMCQCWRK 243
Query: 335 HADKRPT 341
++RPT
Sbjct: 244 DPEERPT 250
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 97/247 (39%), Gaps = 22/247 (8%)
Query: 107 RLGNGRFCTVRKARDRGTGQLVALKQI-PRERQPQQITRAEYNLLSTLMHAHIPTALALF 165
+LG G F V GT + VA+K + P P+ + E ++ L H + A+
Sbjct: 191 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQ-EAQVMKKLRHEKLVQLYAVV 248
Query: 166 ENAPVPGTDTIVMQLVHGESLIQHLCRQST--ITESYICCIIRQLHSALHCLHSQQIAHK 223
P+ IV + + SL+ L ++ + + + Q+ S + + H+
Sbjct: 249 SEEPI----YIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 304
Query: 224 DIRPENILMN-GAVLKLIDLGXXXXXXXXXLPDLEFAS-PEMLTSPATA-----GPSTDM 276
D+R NIL+ V K+ D G + A P T+P A +D+
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 364
Query: 277 WSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP-PEQCGHISVPARELIGQLLNT 334
WS G+LL L + G P+ E + Y P P +C +L+ Q
Sbjct: 365 WSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPPECPE---SLHDLMCQCWRK 420
Query: 335 HADKRPT 341
++RPT
Sbjct: 421 EPEERPT 427
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 96/247 (38%), Gaps = 22/247 (8%)
Query: 107 RLGNGRFCTVRKARDRGTGQLVALKQI-PRERQPQQITRAEYNLLSTLMHAHIPTALALF 165
+LG G F V GT + VA+K + P P+ + E ++ L H + A+
Sbjct: 16 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQ-EAQVMKKLRHEKLVQLYAVV 73
Query: 166 ENAPVPGTDTIVMQLVHGESLIQHLCRQ--STITESYICCIIRQLHSALHCLHSQQIAHK 223
P+ IV + + SL+ L + + + + Q+ S + + H+
Sbjct: 74 SEEPI----YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 129
Query: 224 DIRPENILMN-GAVLKLIDLGXXXXXXXXXLPDLEFAS-PEMLTSPATA-----GPSTDM 276
D+R NIL+ V K+ D G + A P T+P A +D+
Sbjct: 130 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 189
Query: 277 WSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP-PEQCGHISVPARELIGQLLNT 334
WS G+LL L + G P+ E + Y P P +C +L+ Q
Sbjct: 190 WSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPPECPE---SLHDLMCQCWRK 245
Query: 335 HADKRPT 341
++RPT
Sbjct: 246 DPEERPT 252
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 96/247 (38%), Gaps = 22/247 (8%)
Query: 107 RLGNGRFCTVRKARDRGTGQLVALKQI-PRERQPQQITRAEYNLLSTLMHAHIPTALALF 165
+LG G F V GT + VA+K + P P+ + E ++ L H + A+
Sbjct: 192 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGNMSPEAFLQ-EAQVMKKLRHEKLVQLYAVV 249
Query: 166 ENAPVPGTDTIVMQLVHGESLIQHLCRQ--STITESYICCIIRQLHSALHCLHSQQIAHK 223
P+ IV + + SL+ L + + + + Q+ S + + H+
Sbjct: 250 SEEPI----YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 305
Query: 224 DIRPENILMN-GAVLKLIDLGXXXXXXXXXLPDLEFAS-PEMLTSPATA-----GPSTDM 276
D+R NIL+ V K+ D G + A P T+P A +D+
Sbjct: 306 DLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 365
Query: 277 WSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP-PEQCGHISVPARELIGQLLNT 334
WS G+LL L + G P+ E + Y P P +C +L+ Q
Sbjct: 366 WSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPPECPE---SLHDLMCQCWRK 421
Query: 335 HADKRPT 341
++RPT
Sbjct: 422 DPEERPT 428
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 90/226 (39%), Gaps = 22/226 (9%)
Query: 108 LGNGRFCTVRKA---RDRGTGQLVALKQIPRE--RQPQQITRAEYNLLSTLMHAHIPTAL 162
LG G F V + +G VA+K ++ ++ +E ++ L H HI +
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 163 ALFENAPVPGTDTIVMQLVHGESLIQHLCR-QSTITESYICCIIRQLHSALHCLHSQQIA 221
+ E P I+M+L L +L R ++++ + Q+ A+ L S
Sbjct: 80 GIIEEEPT----WIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCV 135
Query: 222 HKDIRPENILMNG-AVLKLIDLGXX--------XXXXXXXLPDLEFASPEMLTSPATAGP 272
H+DI NIL+ +KL D G LP +++ SPE +
Sbjct: 136 HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP-IKWMSPESINFRRFTTA 194
Query: 273 STDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQC 317
S D+W V ++ +LS G PF ++ + D P+ C
Sbjct: 195 S-DVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLC 239
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 90/226 (39%), Gaps = 22/226 (9%)
Query: 108 LGNGRFCTVRKA---RDRGTGQLVALKQIPRE--RQPQQITRAEYNLLSTLMHAHIPTAL 162
LG G F V + +G VA+K ++ ++ +E ++ L H HI +
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 163 ALFENAPVPGTDTIVMQLVHGESLIQHLCR-QSTITESYICCIIRQLHSALHCLHSQQIA 221
+ E P I+M+L L +L R ++++ + Q+ A+ L S
Sbjct: 76 GIIEEEPT----WIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCV 131
Query: 222 HKDIRPENILMNG-AVLKLIDLGXX--------XXXXXXXLPDLEFASPEMLTSPATAGP 272
H+DI NIL+ +KL D G LP +++ SPE +
Sbjct: 132 HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP-IKWMSPESINFRRFTTA 190
Query: 273 STDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQC 317
S D+W V ++ +LS G PF ++ + D P+ C
Sbjct: 191 S-DVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLC 235
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 96/247 (38%), Gaps = 22/247 (8%)
Query: 107 RLGNGRFCTVRKARDRGTGQLVALKQI-PRERQPQQITRAEYNLLSTLMHAHIPTALALF 165
+LG G F V GT + VA+K + P P+ + E ++ L H + A+
Sbjct: 25 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQ-EAQVMKKLRHEKLVQLYAVV 82
Query: 166 ENAPVPGTDTIVMQLVHGESLIQHLCRQ--STITESYICCIIRQLHSALHCLHSQQIAHK 223
P+ IV + + SL+ L + + + + Q+ S + + H+
Sbjct: 83 SEEPI----YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 224 DIRPENILMN-GAVLKLIDLGXXXXXXXXXLPDLEFAS-PEMLTSPATA-----GPSTDM 276
D+R NIL+ V K+ D G + A P T+P A +D+
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 277 WSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP-PEQCGHISVPARELIGQLLNT 334
WS G+LL L + G P+ E + Y P P +C +L+ Q
Sbjct: 199 WSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPPECPE---SLHDLMCQCWRK 254
Query: 335 HADKRPT 341
++RPT
Sbjct: 255 DPEERPT 261
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 94/227 (41%), Gaps = 31/227 (13%)
Query: 105 LERLGNGRFCTVRKARDRGTG-----QLVALKQIPRERQP--QQITRAEYNLLSTLMHAH 157
+E LG RF V K G Q VA+K + + + ++ R E L + L H +
Sbjct: 31 MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPN 90
Query: 158 IPTALALF-ENAPVPGT----------DTIVMQLVHGE--SLIQHLCRQSTITESYICCI 204
+ L + ++ P+ + +VM+ H + S +S + +
Sbjct: 91 VVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHL 150
Query: 205 IRQLHSALHCLHSQQIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXX--------XLPD 255
+ Q+ + + L S + HKD+ N+L+ + +K+ DLG L
Sbjct: 151 VAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLP 210
Query: 256 LEFASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPFLDESEEET 301
+ + +PE + +D+WS GV+L+ + S G+ P+ S ++
Sbjct: 211 IRWMAPEAIMY-GKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDV 256
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 90/226 (39%), Gaps = 22/226 (9%)
Query: 108 LGNGRFCTVRKA---RDRGTGQLVALKQIPRE--RQPQQITRAEYNLLSTLMHAHIPTAL 162
LG G F V + +G VA+K ++ ++ +E ++ L H HI +
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 163 ALFENAPVPGTDTIVMQLVHGESLIQHLCR-QSTITESYICCIIRQLHSALHCLHSQQIA 221
+ E P I+M+L L +L R ++++ + Q+ A+ L S
Sbjct: 92 GIIEEEPT----WIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCV 147
Query: 222 HKDIRPENILMNG-AVLKLIDLGXX--------XXXXXXXLPDLEFASPEMLTSPATAGP 272
H+DI NIL+ +KL D G LP +++ SPE +
Sbjct: 148 HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP-IKWMSPESINFRRFTTA 206
Query: 273 STDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQC 317
S D+W V ++ +LS G PF ++ + D P+ C
Sbjct: 207 S-DVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLC 251
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 71/177 (40%), Gaps = 31/177 (17%)
Query: 184 ESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDL 242
+S ++ Q T+ + + ++R + + + L H+D+ NIL+N V K+ D
Sbjct: 122 DSFLRQNDGQFTVIQ--LVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDF 179
Query: 243 G------------XXXXXXXXXLPDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLS-G 289
G +P + + +PE + S D+WS G++++ ++S G
Sbjct: 180 GLSRFLEDDTSDPTYTSALGGKIP-IRWTAPEAIQYRKFTSAS-DVWSYGIVMWEVMSYG 237
Query: 290 VSPFLDESEEETRAHISVADYSFPPE------------QCGHISVPARELIGQLLNT 334
P+ D + ++ I DY PP C R GQ++NT
Sbjct: 238 ERPYWDMTNQDVINAIE-QDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNT 293
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 13/98 (13%)
Query: 207 QLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXX---------XXXXXXXLPDL 256
QL + L SQ+ H+D+ N+L+ V+K+ D G LP +
Sbjct: 152 QLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP-V 210
Query: 257 EFASPEMLTSPATAGPSTDMWSLGVLLY-ILLSGVSPF 293
++ +PE L S D+WS GVL++ I G SP+
Sbjct: 211 KWMAPEALFDRVYTHQS-DVWSFGVLMWEIFTLGGSPY 247
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 36.2 bits (82), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 96/247 (38%), Gaps = 22/247 (8%)
Query: 107 RLGNGRFCTVRKARDRGTGQLVALKQI-PRERQPQQITRAEYNLLSTLMHAHIPTALALF 165
+LG G F V GT + VA+K + P P+ + E ++ L H + A+
Sbjct: 25 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQ-EAQVMKKLRHEKLVQLYAVV 82
Query: 166 ENAPVPGTDTIVMQLVHGESLIQHLCRQ--STITESYICCIIRQLHSALHCLHSQQIAHK 223
P+ IV + + SL+ L + + + + Q+ S + + H+
Sbjct: 83 SEEPI----YIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 224 DIRPENILMN-GAVLKLIDLGXXXXXXXXXLPDLEFAS-PEMLTSPATA-----GPSTDM 276
D+R NIL+ V K+ D G + A P T+P A +D+
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 277 WSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP-PEQCGHISVPARELIGQLLNT 334
WS G+LL L + G P+ E + Y P P +C +L+ Q
Sbjct: 199 WSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPPECPE---SLHDLMCQCWRK 254
Query: 335 HADKRPT 341
++RPT
Sbjct: 255 DPEERPT 261
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 36.2 bits (82), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 26/128 (20%)
Query: 207 QLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXXXXXXXXXLPD---------- 255
Q+ + L S++ H+D+ NIL++ V+K+ D G PD
Sbjct: 156 QVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKD--PDXVRKGDARLP 213
Query: 256 LEFASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPF----LDES-----EEETRAHI 305
L++ +PE + S D+WS GVLL+ + S G SP+ +DE +E TR +
Sbjct: 214 LKWMAPETIFDRVYTIQS-DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR--M 270
Query: 306 SVADYSFP 313
DY+ P
Sbjct: 271 RAPDYTTP 278
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 13/98 (13%)
Query: 207 QLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXX---------XXXXXXXLPDL 256
QL + L SQ+ H+D+ N+L+ V+K+ D G LP +
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP-V 223
Query: 257 EFASPEMLTSPATAGPSTDMWSLGVLLY-ILLSGVSPF 293
++ +PE L S D+WS GVL++ I G SP+
Sbjct: 224 KWMAPEALFDRVYTHQS-DVWSFGVLMWEIFTLGGSPY 260
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 13/98 (13%)
Query: 207 QLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXX---------XXXXXXXLPDL 256
QL + L SQ+ H+D+ N+L+ V+K+ D G LP +
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP-V 223
Query: 257 EFASPEMLTSPATAGPSTDMWSLGVLLY-ILLSGVSPF 293
++ +PE L S D+WS GVL++ I G SP+
Sbjct: 224 KWMAPEALFDRVYTHQS-DVWSFGVLMWEIFTLGGSPY 260
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 13/98 (13%)
Query: 207 QLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXX---------XXXXXXXLPDL 256
QL + L SQ+ H+D+ N+L+ V+K+ D G LP +
Sbjct: 154 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP-V 212
Query: 257 EFASPEMLTSPATAGPSTDMWSLGVLLY-ILLSGVSPF 293
++ +PE L S D+WS GVL++ I G SP+
Sbjct: 213 KWMAPEALFDRVYTHQS-DVWSFGVLMWEIFTLGGSPY 249
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 13/98 (13%)
Query: 207 QLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXX---------XXXXXXXLPDL 256
QL + L SQ+ H+D+ N+L+ V+K+ D G LP +
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP-V 223
Query: 257 EFASPEMLTSPATAGPSTDMWSLGVLLY-ILLSGVSPF 293
++ +PE L S D+WS GVL++ I G SP+
Sbjct: 224 KWMAPEALFDRVYTHQS-DVWSFGVLMWEIFTLGGSPY 260
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 13/98 (13%)
Query: 207 QLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXX---------XXXXXXXLPDL 256
QL + L SQ+ H+D+ N+L+ V+K+ D G LP +
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP-V 223
Query: 257 EFASPEMLTSPATAGPSTDMWSLGVLLY-ILLSGVSPF 293
++ +PE L S D+WS GVL++ I G SP+
Sbjct: 224 KWMAPEALFDRVYTHQS-DVWSFGVLMWEIFTLGGSPY 260
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 36.2 bits (82), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 96/235 (40%), Gaps = 29/235 (12%)
Query: 105 LERLGNGRFCTVRKAR-DRGTGQL--VALKQIPRE--RQPQQITR--AEYNLLSTLMHAH 157
LE+LG+G F VR+ D +G+ VA+K + + QP+ + E N + +L H +
Sbjct: 17 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 76
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR-QSTITESYICCIIRQLHSALHCLH 216
+ + P+ +V +L SL+ L + Q + Q+ + L
Sbjct: 77 LIRLYGVVLTPPM----KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 132
Query: 217 SQQIAHKDIRPENILMNGAVLKLIDLGXXXXXXXXXLPD------------LEFASPEML 264
S++ H+D+ N+L+ A L+ +G D + +PE L
Sbjct: 133 SKRFIHRDLAARNLLL--ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 190
Query: 265 TSPATAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP-PEQC 317
+ T ++D W GV L+ + + G P++ + + I P PE C
Sbjct: 191 KT-RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDC 244
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 36.2 bits (82), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 13/98 (13%)
Query: 207 QLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXX---------XXXXXXXLPDL 256
QL + L SQ+ H+D+ N+L+ V+K+ D G LP +
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP-V 223
Query: 257 EFASPEMLTSPATAGPSTDMWSLGVLLY-ILLSGVSPF 293
++ +PE L S D+WS GVL++ I G SP+
Sbjct: 224 KWMAPEALFDRVYTHQS-DVWSFGVLMWEIFTLGGSPY 260
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 36.2 bits (82), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 13/98 (13%)
Query: 207 QLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXX---------XXXXXXXLPDL 256
QL + L SQ+ H+D+ N+L+ V+K+ D G LP +
Sbjct: 157 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP-V 215
Query: 257 EFASPEMLTSPATAGPSTDMWSLGVLLY-ILLSGVSPF 293
++ +PE L S D+WS GVL++ I G SP+
Sbjct: 216 KWMAPEALFDRVYTHQS-DVWSFGVLMWEIFTLGGSPY 252
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 13/98 (13%)
Query: 207 QLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXX---------XXXXXXXLPDL 256
QL + L SQ+ H+D+ N+L+ V+K+ D G LP +
Sbjct: 211 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP-V 269
Query: 257 EFASPEMLTSPATAGPSTDMWSLGVLLY-ILLSGVSPF 293
++ +PE L S D+WS GVL++ I G SP+
Sbjct: 270 KWMAPEALFDRVYTHQS-DVWSFGVLMWEIFTLGGSPY 306
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 13/98 (13%)
Query: 207 QLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXX---------XXXXXXXLPDL 256
QL + L SQ+ H+D+ N+L+ V+K+ D G LP +
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLP-V 223
Query: 257 EFASPEMLTSPATAGPSTDMWSLGVLLY-ILLSGVSPF 293
++ +PE L S D+WS GVL++ I G SP+
Sbjct: 224 KWMAPEALFDRVYTHQS-DVWSFGVLMWEIFTLGGSPY 260
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 13/98 (13%)
Query: 207 QLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXX---------XXXXXXXLPDL 256
QL + L SQ+ H+D+ N+L+ V+K+ D G LP +
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLP-V 223
Query: 257 EFASPEMLTSPATAGPSTDMWSLGVLLY-ILLSGVSPF 293
++ +PE L S D+WS GVL++ I G SP+
Sbjct: 224 KWMAPEALFDRVYTHQS-DVWSFGVLMWEIFTLGGSPY 260
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 35.8 bits (81), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 13/98 (13%)
Query: 207 QLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXX---------XXXXXXXLPDL 256
QL + L SQ+ H+D+ N+L+ V+K+ D G LP +
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLP-V 223
Query: 257 EFASPEMLTSPATAGPSTDMWSLGVLLY-ILLSGVSPF 293
++ +PE L S D+WS GVL++ I G SP+
Sbjct: 224 KWMAPEALFDRVYTHQS-DVWSFGVLMWEIFTLGGSPY 260
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 35.8 bits (81), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 96/235 (40%), Gaps = 29/235 (12%)
Query: 105 LERLGNGRFCTVRKAR-DRGTGQL--VALKQIPRE--RQPQQITR--AEYNLLSTLMHAH 157
LE+LG+G F VR+ D +G+ VA+K + + QP+ + E N + +L H +
Sbjct: 23 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 82
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR-QSTITESYICCIIRQLHSALHCLH 216
+ + P+ +V +L SL+ L + Q + Q+ + L
Sbjct: 83 LIRLYGVVLTPPM----KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 138
Query: 217 SQQIAHKDIRPENILMNGAVLKLIDLGXXXXXXXXXLPD------------LEFASPEML 264
S++ H+D+ N+L+ A L+ +G D + +PE L
Sbjct: 139 SKRFIHRDLAARNLLL--ATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESL 196
Query: 265 TSPATAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP-PEQC 317
+ T ++D W GV L+ + + G P++ + + I P PE C
Sbjct: 197 KT-RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDC 250
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 96/235 (40%), Gaps = 29/235 (12%)
Query: 105 LERLGNGRFCTVRKAR-DRGTGQL--VALKQIPRE--RQPQQITR--AEYNLLSTLMHAH 157
LE+LG+G F VR+ D +G+ VA+K + + QP+ + E N + +L H +
Sbjct: 13 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR-QSTITESYICCIIRQLHSALHCLH 216
+ + P+ +V +L SL+ L + Q + Q+ + L
Sbjct: 73 LIRLYGVVLTPPM----KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 128
Query: 217 SQQIAHKDIRPENILMNGAVLKLIDLGXXXXXXXXXLPD------------LEFASPEML 264
S++ H+D+ N+L+ A L+ +G D + +PE L
Sbjct: 129 SKRFIHRDLAARNLLL--ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 186
Query: 265 TSPATAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP-PEQC 317
+ T ++D W GV L+ + + G P++ + + I P PE C
Sbjct: 187 KT-RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDC 240
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 35.8 bits (81), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 96/235 (40%), Gaps = 29/235 (12%)
Query: 105 LERLGNGRFCTVRKAR-DRGTGQL--VALKQIPRE--RQPQQITR--AEYNLLSTLMHAH 157
LE+LG+G F VR+ D +G+ VA+K + + QP+ + E N + +L H +
Sbjct: 23 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 82
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR-QSTITESYICCIIRQLHSALHCLH 216
+ + P+ +V +L SL+ L + Q + Q+ + L
Sbjct: 83 LIRLYGVVLTPPM----KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 138
Query: 217 SQQIAHKDIRPENILMNGAVLKLIDLGXXXXXXXXXLPD------------LEFASPEML 264
S++ H+D+ N+L+ A L+ +G D + +PE L
Sbjct: 139 SKRFIHRDLAARNLLL--ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 196
Query: 265 TSPATAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP-PEQC 317
+ T ++D W GV L+ + + G P++ + + I P PE C
Sbjct: 197 KT-RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDC 250
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 96/235 (40%), Gaps = 29/235 (12%)
Query: 105 LERLGNGRFCTVRKAR-DRGTGQL--VALKQIPRE--RQPQQITR--AEYNLLSTLMHAH 157
LE+LG+G F VR+ D +G+ VA+K + + QP+ + E N + +L H +
Sbjct: 17 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 76
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR-QSTITESYICCIIRQLHSALHCLH 216
+ + P+ +V +L SL+ L + Q + Q+ + L
Sbjct: 77 LIRLYGVVLTPPM----KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 132
Query: 217 SQQIAHKDIRPENILMNGAVLKLIDLGXXXXXXXXXLPD------------LEFASPEML 264
S++ H+D+ N+L+ A L+ +G D + +PE L
Sbjct: 133 SKRFIHRDLAARNLLL--ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 190
Query: 265 TSPATAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP-PEQC 317
+ T ++D W GV L+ + + G P++ + + I P PE C
Sbjct: 191 KT-RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDC 244
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 35.4 bits (80), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 20/163 (12%)
Query: 85 YTVPFETRWQQEQFEHRYEELERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQ-QIT 143
+ +PFE + E E +G GRF V R G VA++ I ER + Q+
Sbjct: 28 WDIPFE----------QLEIGELIGKGRFGQVYHGRWHGE---VAIRLIDIERDNEDQLK 74
Query: 144 RAEYNLLSTLMHAHIPTALALFENAPV-PGTDTIVMQLVHGESLIQHLCRQSTIT--ESY 200
+ +++ H + LF A + P I+ L G +L + R + I +
Sbjct: 75 AFKREVMAYRQTRH--ENVVLFMGACMSPPHLAIITSLCKGRTLYS-VVRDAKIVLDVNK 131
Query: 201 ICCIIRQLHSALHCLHSQQIAHKDIRPENILMNGAVLKLIDLG 243
I +++ + LH++ I HKD++ +N+ + + + D G
Sbjct: 132 TRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYDNGKVVITDFG 174
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 35.4 bits (80), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 18/153 (11%)
Query: 207 QLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXXX-----------XXXXXXLP 254
Q+ + L S++ H+D+ N +++ +K+ D G LP
Sbjct: 133 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 192
Query: 255 DLEFASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP 313
A + T T +D+WS GVLL+ L++ G P+ D + + ++
Sbjct: 193 VKWMALESLQTQKFTT--KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ 250
Query: 314 PEQCGHISVPARELIGQLLNTHADKRPTAGQLL 346
PE C P E++ + + A+ RP+ +L+
Sbjct: 251 PEYCPD---PLYEVMLKCWHPKAEMRPSFSELV 280
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 96/247 (38%), Gaps = 22/247 (8%)
Query: 107 RLGNGRFCTVRKARDRGTGQLVALKQI-PRERQPQQITRAEYNLLSTLMHAHIPTALALF 165
+LG G F V GT + VA+K + P P+ + E ++ + H + A+
Sbjct: 25 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQ-EAQVMKKIRHEKLVQLYAVV 82
Query: 166 ENAPVPGTDTIVMQLVHGESLIQHLCRQ--STITESYICCIIRQLHSALHCLHSQQIAHK 223
P+ IV + + SL+ L + + + + Q+ S + + H+
Sbjct: 83 SEEPI----YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 224 DIRPENILMN-GAVLKLIDLGXXXXXXXXXLPDLEFAS-PEMLTSPATA-----GPSTDM 276
D+R NIL+ V K+ D G + A P T+P A +D+
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 277 WSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP-PEQCGHISVPARELIGQLLNT 334
WS G+LL L + G P+ E + Y P P +C +L+ Q
Sbjct: 199 WSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPPECPE---SLHDLMCQCWRK 254
Query: 335 HADKRPT 341
++RPT
Sbjct: 255 DPEERPT 261
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 35.4 bits (80), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 18/153 (11%)
Query: 207 QLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXXX-----------XXXXXXLP 254
Q+ + L S++ H+D+ N +++ +K+ D G LP
Sbjct: 141 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 200
Query: 255 DLEFASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP 313
A + T T +D+WS GVLL+ L++ G P+ D + + ++
Sbjct: 201 VKWMALESLQTQKFTT--KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ 258
Query: 314 PEQCGHISVPARELIGQLLNTHADKRPTAGQLL 346
PE C P E++ + + A+ RP+ +L+
Sbjct: 259 PEYCPD---PLYEVMLKCWHPKAEMRPSFSELV 288
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 35.4 bits (80), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 13/98 (13%)
Query: 207 QLHSALHCLHSQQIAHKDIRPENILM-NGAVLKLIDLGXXX---------XXXXXXLPDL 256
Q+ + L S+ H+D+ N+L+ NG V K+ D G LP +
Sbjct: 168 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP-V 226
Query: 257 EFASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPF 293
++ +PE + +D+WS G+LL+ + S G++P+
Sbjct: 227 KWMAPESIFD-CVYTVQSDVWSYGILLWEIFSLGLNPY 263
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 35.4 bits (80), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 18/153 (11%)
Query: 207 QLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXXX-----------XXXXXXLP 254
Q+ + L S++ H+D+ N +++ +K+ D G LP
Sbjct: 140 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 199
Query: 255 DLEFASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP 313
A + T T +D+WS GVLL+ L++ G P+ D + + ++
Sbjct: 200 VKWMALESLQTQKFTT--KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ 257
Query: 314 PEQCGHISVPARELIGQLLNTHADKRPTAGQLL 346
PE C P E++ + + A+ RP+ +L+
Sbjct: 258 PEYCPD---PLYEVMLKCWHPKAEMRPSFSELV 287
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 35.4 bits (80), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 49/228 (21%), Positives = 93/228 (40%), Gaps = 25/228 (10%)
Query: 108 LGNGRFCTVRKARDRGTGQLV-----ALKQIPRERQPQQITRAEYNLLSTLMHAHIPTAL 162
LG G F +VR+ R + + LKQ + +++ R E ++ L + +I +
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMR-EAQIMHQLDNPYIVRLI 402
Query: 163 ALFENAPVPGTDTIVMQLVHGESLIQHLC-RQSTITESYICCIIRQLHSALHCLHSQQIA 221
+ + + +VM++ G L + L ++ I S + ++ Q+ + L +
Sbjct: 403 GVCQAEAL----MLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFV 458
Query: 222 HKDIRPENILM-NGAVLKLIDLGXXX----------XXXXXXLPDLEFASPEMLTSPATA 270
H+++ N+L+ N K+ D G P L++ +PE + +
Sbjct: 459 HRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWP-LKWYAPECINFRKFS 517
Query: 271 GPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQC 317
S D+WS GV ++ LS G P+ E A I P +C
Sbjct: 518 SRS-DVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPEC 564
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 35.4 bits (80), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 95/231 (41%), Gaps = 25/231 (10%)
Query: 108 LGNGRFCTVRKARDRGTGQ------LVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTA 161
+G+G V R R GQ + ALK ERQ + +E +++ H +I
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFL-SEASIMGQFDHPNIIRL 115
Query: 162 LALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQIA 221
+ + T M+ ++ ++ Q TI + + ++R + + + L
Sbjct: 116 EGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQ--LVGMLRGVGAGMRYLSDLGYV 173
Query: 222 HKDIRPENILMNGA-VLKLIDLGXXXXXXXXXLPDLEFAS-----PEMLTSPA-----TA 270
H+D+ N+L++ V K+ D G PD + + P T+P T
Sbjct: 174 HRDLAARNVLVDSNLVCKVSDFGLSRVLEDD--PDAAYTTTGGKIPIRWTAPEAIAFRTF 231
Query: 271 GPSTDMWSLGVLLY-ILLSGVSPFLDESEEETRAHISVADYSFP-PEQCGH 319
++D+WS GV+++ +L G P+ + + + + + Y P P C H
Sbjct: 232 SSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEG-YRLPAPMGCPH 281
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 35.4 bits (80), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 18/153 (11%)
Query: 207 QLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXXX-----------XXXXXXLP 254
Q+ + L S++ H+D+ N +++ +K+ D G LP
Sbjct: 139 QVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP 198
Query: 255 DLEFASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP 313
A + T T +D+WS GVLL+ L++ G P+ D + + ++
Sbjct: 199 VKWMALESLQTQKFTT--KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ 256
Query: 314 PEQCGHISVPARELIGQLLNTHADKRPTAGQLL 346
PE C P E++ + + A+ RP+ +L+
Sbjct: 257 PEYCPD---PLYEVMLKCWHPKAEMRPSFSELV 286
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 35.4 bits (80), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 18/153 (11%)
Query: 207 QLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXXX-----------XXXXXXLP 254
Q+ + L S++ H+D+ N +++ +K+ D G LP
Sbjct: 140 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLP 199
Query: 255 DLEFASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP 313
A + T T +D+WS GVLL+ L++ G P+ D + + ++
Sbjct: 200 VKWMALESLQTQKFTT--KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ 257
Query: 314 PEQCGHISVPARELIGQLLNTHADKRPTAGQLL 346
PE C P E++ + + A+ RP+ +L+
Sbjct: 258 PEYCPD---PLYEVMLKCWHPKAEMRPSFSELV 287
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 35.4 bits (80), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 18/153 (11%)
Query: 207 QLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXXX-----------XXXXXXLP 254
Q+ + L S++ H+D+ N +++ +K+ D G LP
Sbjct: 141 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 200
Query: 255 DLEFASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP 313
A + T T +D+WS GVLL+ L++ G P+ D + + ++
Sbjct: 201 VKWMALESLQTQKFTT--KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ 258
Query: 314 PEQCGHISVPARELIGQLLNTHADKRPTAGQLL 346
PE C P E++ + + A+ RP+ +L+
Sbjct: 259 PEYCPD---PLYEVMLKCWHPKAEMRPSFSELV 288
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 35.4 bits (80), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 13/98 (13%)
Query: 207 QLHSALHCLHSQQIAHKDIRPENILM-NGAVLKLIDLGXXX---------XXXXXXLPDL 256
Q+ + L S+ H+D+ N+L+ NG V K+ D G LP +
Sbjct: 174 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP-V 232
Query: 257 EFASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPF 293
++ +PE + +D+WS G+LL+ + S G++P+
Sbjct: 233 KWMAPESIFD-CVYTVQSDVWSYGILLWEIFSLGLNPY 269
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 35.4 bits (80), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 18/153 (11%)
Query: 207 QLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXXX-----------XXXXXXLP 254
Q+ + L S++ H+D+ N +++ +K+ D G LP
Sbjct: 139 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 198
Query: 255 DLEFASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP 313
A + T T +D+WS GVLL+ L++ G P+ D + + ++
Sbjct: 199 VKWMALESLQTQKFTT--KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ 256
Query: 314 PEQCGHISVPARELIGQLLNTHADKRPTAGQLL 346
PE C P E++ + + A+ RP+ +L+
Sbjct: 257 PEYCPD---PLYEVMLKCWHPKAEMRPSFSELV 286
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 35.4 bits (80), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 18/153 (11%)
Query: 207 QLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXXX-----------XXXXXXLP 254
Q+ + L S++ H+D+ N +++ +K+ D G LP
Sbjct: 136 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 195
Query: 255 DLEFASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP 313
A + T T +D+WS GVLL+ L++ G P+ D + + ++
Sbjct: 196 VKWMALESLQTQKFTT--KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ 253
Query: 314 PEQCGHISVPARELIGQLLNTHADKRPTAGQLL 346
PE C P E++ + + A+ RP+ +L+
Sbjct: 254 PEYCPD---PLYEVMLKCWHPKAEMRPSFSELV 283
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 35.0 bits (79), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 96/235 (40%), Gaps = 29/235 (12%)
Query: 105 LERLGNGRFCTVRKAR-DRGTGQL--VALKQIPRE--RQPQQITR--AEYNLLSTLMHAH 157
LE+LG+G F VR+ D +G+ VA+K + + QP+ + E N + +L H +
Sbjct: 13 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR-QSTITESYICCIIRQLHSALHCLH 216
+ + P+ +V +L SL+ L + Q + Q+ + L
Sbjct: 73 LIRLYGVVLTPPM----KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 128
Query: 217 SQQIAHKDIRPENILMNGAVLKLIDLGXXXXXXXXXLPD------------LEFASPEML 264
S++ H+D+ N+L+ A L+ +G D + +PE L
Sbjct: 129 SKRFIHRDLAARNLLL--ATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 186
Query: 265 TSPATAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP-PEQC 317
+ T ++D W GV L+ + + G P++ + + I P PE C
Sbjct: 187 KT-RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDC 240
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 35.0 bits (79), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 96/235 (40%), Gaps = 29/235 (12%)
Query: 105 LERLGNGRFCTVRKAR-DRGTGQL--VALKQIPRE--RQPQQITR--AEYNLLSTLMHAH 157
LE+LG+G F VR+ D +G+ VA+K + + QP+ + E N + +L H +
Sbjct: 13 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRN 72
Query: 158 IPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR-QSTITESYICCIIRQLHSALHCLH 216
+ + P+ +V +L SL+ L + Q + Q+ + L
Sbjct: 73 LIRLYGVVLTPPM----KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE 128
Query: 217 SQQIAHKDIRPENILMNGAVLKLIDLGXXXXXXXXXLPD------------LEFASPEML 264
S++ H+D+ N+L+ A L+ +G D + +PE L
Sbjct: 129 SKRFIHRDLAARNLLL--ATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESL 186
Query: 265 TSPATAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP-PEQC 317
+ T ++D W GV L+ + + G P++ + + I P PE C
Sbjct: 187 KT-RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDC 240
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 35.0 bits (79), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 18/153 (11%)
Query: 207 QLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXXX-----------XXXXXXLP 254
Q+ + L S++ H+D+ N +++ +K+ D G LP
Sbjct: 160 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 219
Query: 255 DLEFASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP 313
A + T T +D+WS GVLL+ L++ G P+ D + + ++
Sbjct: 220 VKWMALESLQTQKFTT--KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ 277
Query: 314 PEQCGHISVPARELIGQLLNTHADKRPTAGQLL 346
PE C P E++ + + A+ RP+ +L+
Sbjct: 278 PEYCPD---PLYEVMLKCWHPKAEMRPSFSELV 307
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 35.0 bits (79), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 18/153 (11%)
Query: 207 QLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXXX-----------XXXXXXLP 254
Q+ + L S++ H+D+ N +++ +K+ D G LP
Sbjct: 138 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 197
Query: 255 DLEFASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP 313
A + T T +D+WS GVLL+ L++ G P+ D + + ++
Sbjct: 198 VKWMALESLQTQKFTT--KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ 255
Query: 314 PEQCGHISVPARELIGQLLNTHADKRPTAGQLL 346
PE C P E++ + + A+ RP+ +L+
Sbjct: 256 PEYCPD---PLYEVMLKCWHPKAEMRPSFSELV 285
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 35.0 bits (79), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 13/98 (13%)
Query: 207 QLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXX---------XXXXXXXLPDL 256
QL + L SQ+ H+D+ N+L+ V+++ D G LP +
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLP-V 223
Query: 257 EFASPEMLTSPATAGPSTDMWSLGVLLY-ILLSGVSPF 293
++ +PE L S D+WS GVL++ I G SP+
Sbjct: 224 KWMAPEALFDRVYTHQS-DVWSFGVLMWEIFTLGGSPY 260
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 35.0 bits (79), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 18/153 (11%)
Query: 207 QLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXXX-----------XXXXXXLP 254
Q+ + L S++ H+D+ N +++ +K+ D G LP
Sbjct: 141 QVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP 200
Query: 255 DLEFASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP 313
A + T T +D+WS GVLL+ L++ G P+ D + + ++
Sbjct: 201 VKWMALESLQTQKFTT--KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ 258
Query: 314 PEQCGHISVPARELIGQLLNTHADKRPTAGQLL 346
PE C P E++ + + A+ RP+ +L+
Sbjct: 259 PEYCPD---PLYEVMLKCWHPKAEMRPSFSELV 288
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 35.0 bits (79), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 18/153 (11%)
Query: 207 QLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXXX-----------XXXXXXLP 254
Q+ + L S++ H+D+ N +++ +K+ D G LP
Sbjct: 141 QVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP 200
Query: 255 DLEFASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP 313
A + T T +D+WS GVLL+ L++ G P+ D + + ++
Sbjct: 201 VKWMALESLQTQKFTT--KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ 258
Query: 314 PEQCGHISVPARELIGQLLNTHADKRPTAGQLL 346
PE C P E++ + + A+ RP+ +L+
Sbjct: 259 PEYCPD---PLYEVMLKCWHPKAEMRPSFSELV 288
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 35.0 bits (79), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 18/153 (11%)
Query: 207 QLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXXX-----------XXXXXXLP 254
Q+ + L S++ H+D+ N +++ +K+ D G LP
Sbjct: 142 QVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP 201
Query: 255 DLEFASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP 313
A + T T +D+WS GVLL+ L++ G P+ D + + ++
Sbjct: 202 VKWMALESLQTQKFTT--KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ 259
Query: 314 PEQCGHISVPARELIGQLLNTHADKRPTAGQLL 346
PE C P E++ + + A+ RP+ +L+
Sbjct: 260 PEYCPD---PLYEVMLKCWHPKAEMRPSFSELV 289
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 35.0 bits (79), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 18/153 (11%)
Query: 207 QLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXXX-----------XXXXXXLP 254
Q+ + L S++ H+D+ N +++ +K+ D G LP
Sbjct: 146 QVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP 205
Query: 255 DLEFASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP 313
A + T T +D+WS GVLL+ L++ G P+ D + + ++
Sbjct: 206 VKWMALESLQTQKFTT--KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ 263
Query: 314 PEQCGHISVPARELIGQLLNTHADKRPTAGQLL 346
PE C P E++ + + A+ RP+ +L+
Sbjct: 264 PEYCPD---PLYEVMLKCWHPKAEMRPSFSELV 293
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 35.0 bits (79), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 13/98 (13%)
Query: 207 QLHSALHCLHSQQIAHKDIRPENILM-NGAVLKLIDLGXXX---------XXXXXXLPDL 256
Q+ + L S+ H+D+ N+L+ NG V K+ D G LP +
Sbjct: 160 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP-V 218
Query: 257 EFASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPF 293
++ +PE + +D+WS G+LL+ + S G++P+
Sbjct: 219 KWMAPESIFD-CVYTVQSDVWSYGILLWEIFSLGLNPY 255
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 35.0 bits (79), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 18/153 (11%)
Query: 207 QLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXXX-----------XXXXXXLP 254
Q+ + L S++ H+D+ N +++ +K+ D G LP
Sbjct: 142 QVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLP 201
Query: 255 DLEFASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP 313
A + T T +D+WS GVLL+ L++ G P+ D + + ++
Sbjct: 202 VKWMALESLQTQKFTT--KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ 259
Query: 314 PEQCGHISVPARELIGQLLNTHADKRPTAGQLL 346
PE C P E++ + + A+ RP+ +L+
Sbjct: 260 PEYCPD---PLYEVMLKCWHPKAEMRPSFSELV 289
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 34.7 bits (78), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 18/153 (11%)
Query: 207 QLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXXX-----------XXXXXXLP 254
Q+ + L S++ H+D+ N +++ +K+ D G LP
Sbjct: 159 QVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP 218
Query: 255 DLEFASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP 313
A + T T +D+WS GVLL+ L++ G P+ D + + ++
Sbjct: 219 VKWMALESLQTQKFTT--KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ 276
Query: 314 PEQCGHISVPARELIGQLLNTHADKRPTAGQLL 346
PE C P E++ + + A+ RP+ +L+
Sbjct: 277 PEYCPD---PLYEVMLKCWHPKAEMRPSFSELV 306
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 34.7 bits (78), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 95/247 (38%), Gaps = 22/247 (8%)
Query: 107 RLGNGRFCTVRKARDRGTGQLVALKQI-PRERQPQQITRAEYNLLSTLMHAHIPTALALF 165
+LG G F V GT + VA+K + P P+ + E ++ L H + A+
Sbjct: 25 KLGQGCFGEVWMGTWNGTTR-VAIKTLKPGTMSPEAFLQ-EAQVMKKLRHEKLVQLYAVV 82
Query: 166 ENAPVPGTDTIVMQLVHGESLIQHLCRQ--STITESYICCIIRQLHSALHCLHSQQIAHK 223
P+ IV + + L+ L + + + + Q+ S + + H+
Sbjct: 83 SEEPI----YIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHR 138
Query: 224 DIRPENILMN-GAVLKLIDLGXXXXXXXXXLPDLEFAS-PEMLTSPATA-----GPSTDM 276
D+R NIL+ V K+ D G + A P T+P A +D+
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 277 WSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP-PEQCGHISVPARELIGQLLNT 334
WS G+LL L + G P+ E + Y P P +C +L+ Q
Sbjct: 199 WSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPPECPE---SLHDLMCQCWRK 254
Query: 335 HADKRPT 341
++RPT
Sbjct: 255 DPEERPT 261
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 34.7 bits (78), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 64/153 (41%), Gaps = 18/153 (11%)
Query: 207 QLHSALHCLHSQQIAHKDIRPENILMNGA-VLKLIDLGXXX-----------XXXXXXLP 254
Q+ + L S++ H+D+ N +++ +K+ D G LP
Sbjct: 200 QVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP 259
Query: 255 DLEFASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFP 313
A + T T +D+WS GVLL+ L++ G P+ D + + ++
Sbjct: 260 VKWMALESLQTQKFTT--KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ 317
Query: 314 PEQCGHISVPARELIGQLLNTHADKRPTAGQLL 346
PE C P E++ + + A+ RP+ +L+
Sbjct: 318 PEYCPD---PLYEVMLKCWHPKAEMRPSFSELV 347
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 34.7 bits (78), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 13/98 (13%)
Query: 207 QLHSALHCLHSQQIAHKDIRPENILM-NGAVLKLIDLGXX---------XXXXXXXLPDL 256
Q+ + L S+ H+D+ N+L+ NG V K+ D G LP +
Sbjct: 166 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP-V 224
Query: 257 EFASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPF 293
++ +PE + +D+WS G+LL+ + S G++P+
Sbjct: 225 KWMAPESIFD-CVYTVQSDVWSYGILLWEIFSLGLNPY 261
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 56/135 (41%), Gaps = 13/135 (9%)
Query: 194 STITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILMNGAVL-KLIDLGXXXXXXX-- 250
+ +T+S + I +Q+ + + L SQ H+D+ N L+ +L K+ D G
Sbjct: 123 TELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTD 182
Query: 251 -------XXLPDLEFASPEMLTSPATAGPSTDMWSLGVLLY-ILLSGVSPFLDESEEETR 302
LP + + PE + S D+WSLGV+L+ I G P+ S E
Sbjct: 183 YYRVGGHTMLP-IRWMPPESIMYRKFTTES-DVWSLGVVLWEIFTYGKQPWYQLSNNEVI 240
Query: 303 AHISVADYSFPPEQC 317
I+ P C
Sbjct: 241 ECITQGRVLQRPRTC 255
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 95/214 (44%), Gaps = 26/214 (12%)
Query: 99 EHRYEELERLGNGRFCTVRKARDRGTGQLV----ALKQIPRERQPQ---QITRAEYNLLS 151
E +++++ LG+G F TV K G+ V A+K++ P+ +I Y +++
Sbjct: 18 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY-VMA 76
Query: 152 TLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR-QSTITESYICCIIRQLHS 210
++ + H+ L + + V ++MQL+ L+ ++ + I Y+ Q+
Sbjct: 77 SVDNPHVCRLLGICLTSTV----QLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 132
Query: 211 ALHCLHSQQIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXX---------XLPDLEFAS 260
++ L +++ H+D+ N+L+ +K+ D G +P A
Sbjct: 133 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 192
Query: 261 PEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPF 293
+L T +D+WS GV ++ L++ G P+
Sbjct: 193 ESILHRIYTH--QSDVWSYGVTVWELMTFGSKPY 224
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 53/264 (20%), Positives = 109/264 (41%), Gaps = 37/264 (14%)
Query: 99 EHRYEELERLGNGRFCTVRKARDRGTGQLV----ALKQIPRERQPQ---QITRAEYNLLS 151
E +++++ LG+G F TV K G+ V A+K++ P+ +I Y +++
Sbjct: 16 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY-VMA 74
Query: 152 TLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR-QSTITESYICCIIRQLHS 210
++ + H+ L + + V ++MQL+ L+ ++ + I Y+ Q+
Sbjct: 75 SVDNPHVCRLLGICLTSTV----QLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 130
Query: 211 ALHCLHSQQIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXX---------XLPDLEFAS 260
++ L +++ H+D+ N+L+ +K+ D G +P A
Sbjct: 131 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 261 PEMLTSPATAGPSTDMWSLGVLLYILL------------SGVSPFLDESEEETRAHISVA 308
+L T +D+WS GV ++ L+ S +S L++ E + I
Sbjct: 191 ESILHRIYTH--QSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTI 248
Query: 309 DYSFPPEQCGHISVPARELIGQLL 332
D +C I +R +L+
Sbjct: 249 DVYMIMRKCWMIDADSRPKFRELI 272
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 95/214 (44%), Gaps = 26/214 (12%)
Query: 99 EHRYEELERLGNGRFCTVRKARDRGTGQLV----ALKQIPRERQPQ---QITRAEYNLLS 151
E +++++ LG+G F TV K G+ V A+K++ P+ +I Y +++
Sbjct: 16 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY-VMA 74
Query: 152 TLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR-QSTITESYICCIIRQLHS 210
++ + H+ L + + V ++MQL+ L+ ++ + I Y+ Q+
Sbjct: 75 SVDNPHVCRLLGICLTSTV----QLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 130
Query: 211 ALHCLHSQQIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXX---------XLPDLEFAS 260
++ L +++ H+D+ N+L+ +K+ D G +P A
Sbjct: 131 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 261 PEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPF 293
+L T +D+WS GV ++ L++ G P+
Sbjct: 191 ESILHRIYTH--QSDVWSYGVTVWELMTFGSKPY 222
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 95/214 (44%), Gaps = 26/214 (12%)
Query: 99 EHRYEELERLGNGRFCTVRKARDRGTGQLV----ALKQIPRERQPQ---QITRAEYNLLS 151
E +++++ LG+G F TV K G+ V A+K++ P+ +I Y +++
Sbjct: 18 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY-VMA 76
Query: 152 TLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR-QSTITESYICCIIRQLHS 210
++ + H+ L + + V ++MQL+ L+ ++ + I Y+ Q+
Sbjct: 77 SVDNPHVCRLLGICLTSTV----QLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 132
Query: 211 ALHCLHSQQIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXX---------XLPDLEFAS 260
++ L +++ H+D+ N+L+ +K+ D G +P A
Sbjct: 133 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 192
Query: 261 PEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPF 293
+L T +D+WS GV ++ L++ G P+
Sbjct: 193 ESILHRIYTH--QSDVWSYGVTVWELMTFGSKPY 224
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 95/214 (44%), Gaps = 26/214 (12%)
Query: 99 EHRYEELERLGNGRFCTVRKARDRGTGQLV----ALKQIPRERQPQ---QITRAEYNLLS 151
E +++++ LG+G F TV K G+ V A+K++ P+ +I Y +++
Sbjct: 15 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY-VMA 73
Query: 152 TLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR-QSTITESYICCIIRQLHS 210
++ + H+ L + + V ++MQL+ L+ ++ + I Y+ Q+
Sbjct: 74 SVDNPHVCRLLGICLTSTV----QLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAK 129
Query: 211 ALHCLHSQQIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXX---------XLPDLEFAS 260
++ L +++ H+D+ N+L+ +K+ D G +P A
Sbjct: 130 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 189
Query: 261 PEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPF 293
+L T +D+WS GV ++ L++ G P+
Sbjct: 190 ESILHRIYTH--QSDVWSYGVTVWELMTFGSKPY 221
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 95/214 (44%), Gaps = 26/214 (12%)
Query: 99 EHRYEELERLGNGRFCTVRKARDRGTGQLV----ALKQIPRERQPQ---QITRAEYNLLS 151
E +++++ LG+G F TV K G+ V A+K++ P+ +I Y +++
Sbjct: 16 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY-VMA 74
Query: 152 TLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR-QSTITESYICCIIRQLHS 210
++ + H+ L + + V ++MQL+ L+ ++ + I Y+ Q+
Sbjct: 75 SVDNPHVCRLLGICLTSTV----QLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 130
Query: 211 ALHCLHSQQIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXX---------XLPDLEFAS 260
++ L +++ H+D+ N+L+ +K+ D G +P A
Sbjct: 131 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 261 PEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPF 293
+L T +D+WS GV ++ L++ G P+
Sbjct: 191 ESILHRIYTH--QSDVWSYGVTVWELMTFGSKPY 222
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 95/214 (44%), Gaps = 26/214 (12%)
Query: 99 EHRYEELERLGNGRFCTVRKARDRGTGQLV----ALKQIPRERQPQ---QITRAEYNLLS 151
E +++++ LG+G F TV K G+ V A+K++ P+ +I Y +++
Sbjct: 15 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY-VMA 73
Query: 152 TLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR-QSTITESYICCIIRQLHS 210
++ + H+ L + + V ++MQL+ L+ ++ + I Y+ Q+
Sbjct: 74 SVDNPHVCRLLGICLTSTV----QLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 129
Query: 211 ALHCLHSQQIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXX---------XLPDLEFAS 260
++ L +++ H+D+ N+L+ +K+ D G +P A
Sbjct: 130 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 189
Query: 261 PEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPF 293
+L T +D+WS GV ++ L++ G P+
Sbjct: 190 ESILHRIYTH--QSDVWSYGVTVWELMTFGSKPY 221
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 95/214 (44%), Gaps = 26/214 (12%)
Query: 99 EHRYEELERLGNGRFCTVRKARDRGTGQLV----ALKQIPRERQPQ---QITRAEYNLLS 151
E +++++ LG+G F TV K G+ V A+K++ P+ +I Y +++
Sbjct: 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY-VMA 72
Query: 152 TLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR-QSTITESYICCIIRQLHS 210
++ + H+ L + + V ++MQL+ L+ ++ + I Y+ Q+
Sbjct: 73 SVDNPHVCRLLGICLTSTV----QLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 211 ALHCLHSQQIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXX---------XLPDLEFAS 260
++ L +++ H+D+ N+L+ +K+ D G +P A
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 261 PEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPF 293
+L T +D+WS GV ++ L++ G P+
Sbjct: 189 ESILHRIYTH--QSDVWSYGVTVWELMTFGSKPY 220
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 95/214 (44%), Gaps = 26/214 (12%)
Query: 99 EHRYEELERLGNGRFCTVRKARDRGTGQLV----ALKQIPRERQPQ---QITRAEYNLLS 151
E +++++ LG+G F TV K G+ V A+K++ P+ +I Y +++
Sbjct: 17 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY-VMA 75
Query: 152 TLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR-QSTITESYICCIIRQLHS 210
++ + H+ L + + V ++MQL+ L+ ++ + I Y+ Q+
Sbjct: 76 SVDNPHVCRLLGICLTSTV----QLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 131
Query: 211 ALHCLHSQQIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXX---------XLPDLEFAS 260
++ L +++ H+D+ N+L+ +K+ D G +P A
Sbjct: 132 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 191
Query: 261 PEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPF 293
+L T +D+WS GV ++ L++ G P+
Sbjct: 192 ESILHRIYTH--QSDVWSYGVTVWELMTFGSKPY 223
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/118 (21%), Positives = 52/118 (44%), Gaps = 14/118 (11%)
Query: 201 ICCIIRQLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLG----------XXXXXX 249
+ ++R + + + L + H+D+ NIL+N V K+ D G
Sbjct: 149 LVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTS 208
Query: 250 XXXLPDLEFASPEMLTSPATAGPSTDMWSLGVLLY-ILLSGVSPFLDESEEETRAHIS 306
+P + + +PE ++ S D+WS G++++ ++ G P+ + S E I+
Sbjct: 209 GGKIP-IRWTAPEAISYRKFTSAS-DVWSFGIVMWEVMTYGERPYWELSNHEVMKAIN 264
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 65/156 (41%), Gaps = 17/156 (10%)
Query: 176 IVMQLVHGESLIQHLCR-QSTITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILMN- 233
IV++ + +L L + T + ++R + + + L H+D+ NIL+N
Sbjct: 121 IVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNS 180
Query: 234 GAVLKLIDLG----------XXXXXXXXXLPDLEFASPEMLTSPATAGPSTDMWSLGVLL 283
V K+ D G +P + + +PE + S D+WS G+++
Sbjct: 181 NLVCKVSDFGLSRVIEDDPEAVYTTTGGKIP-VRWTAPEAIQYRKFTSAS-DVWSYGIVM 238
Query: 284 YILLS-GVSPFLDESEEETRAHISVADYSFP-PEQC 317
+ ++S G P+ D S ++ I Y P P C
Sbjct: 239 WEVMSYGERPYWDMSNQDVIKAIEEG-YRLPAPMDC 273
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 95/232 (40%), Gaps = 27/232 (11%)
Query: 108 LGNGRFCTVRKARDRGTGQ------LVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTA 161
+G+G V R R GQ + ALK ERQ + +E +++ H +I
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFL-SEASIMGQFDHPNIIRL 115
Query: 162 LALFENAPVPGTDTIVMQLVHGESLIQHLCRQSTITESYICCIIRQLHSALHCLHSQQIA 221
+ + T M+ ++ ++ Q TI + + ++R + + + L
Sbjct: 116 EGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQ--LVGMLRGVGAGMRYLSDLGYV 173
Query: 222 HKDIRPENILMNGA-VLKLIDLGXXXXXXXXXLPD-----------LEFASPEMLTSPAT 269
H+D+ N+L++ V K+ D G PD + + +PE + T
Sbjct: 174 HRDLAARNVLVDSNLVCKVSDFGLSRVLEDD--PDAAXTTTGGKIPIRWTAPEAIAF-RT 230
Query: 270 AGPSTDMWSLGVLLY-ILLSGVSPFLDESEEETRAHISVADYSFP-PEQCGH 319
++D+WS GV+++ +L G P+ + + + + + Y P P C H
Sbjct: 231 FSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEG-YRLPAPMGCPH 281
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 61/149 (40%), Gaps = 15/149 (10%)
Query: 106 ERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTALALF 165
E +G GRF V + + RG + VA+K + AE L H +I +A
Sbjct: 10 ESIGKGRFGEVWRGKWRG--EEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAAD 67
Query: 166 ENAPVPGTDTIVMQLVHGE-SLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ------ 218
T ++ H SL +L R + E I + S L LH +
Sbjct: 68 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLAL-STASGLAHLHMEIVGTQG 126
Query: 219 --QIAHKDIRPENILM--NGAVLKLIDLG 243
IAH+D++ +NIL+ NG + DLG
Sbjct: 127 KPAIAHRDLKSKNILVKKNGTCC-IADLG 154
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 61/132 (46%), Gaps = 11/132 (8%)
Query: 106 ERLGNGRFCTVRKARDRGTGQLVALKQIPR-ERQPQQITRAEYNLLSTLMHAHIPTALA- 163
E LG G F K R TG+++ +K++ R + + Q+ E ++ L H ++ +
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGV 75
Query: 164 LFENAPVPGTDTIVMQLVHGESL---IQHLCRQSTITESYICCIIRQLHSALHCLHSQQI 220
L+++ + + + + G +L I+ + Q ++ + + S + LHS I
Sbjct: 76 LYKDKRL----NFITEYIKGGTLRGIIKSMDSQYPWSQR--VSFAKDIASGMAYLHSMNI 129
Query: 221 AHKDIRPENILM 232
H+D+ N L+
Sbjct: 130 IHRDLNSHNCLV 141
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 61/149 (40%), Gaps = 15/149 (10%)
Query: 106 ERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTALALF 165
E +G GRF V + + RG + VA+K + AE L H +I +A
Sbjct: 48 ESIGKGRFGEVWRGKWRG--EEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAAD 105
Query: 166 ENAPVPGTDTIVMQLVHGE-SLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ------ 218
T ++ H SL +L R + E I + S L LH +
Sbjct: 106 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLAL-STASGLAHLHMEIVGTQG 164
Query: 219 --QIAHKDIRPENILM--NGAVLKLIDLG 243
IAH+D++ +NIL+ NG + DLG
Sbjct: 165 KPAIAHRDLKSKNILVKKNGTCC-IADLG 192
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 61/164 (37%), Gaps = 35/164 (21%)
Query: 150 LSTLMHAHIPTALALFENAPVPGTDTIVM-QLVHGESLIQHLCRQSTITESYICCIIRQL 208
L+ + AH P A+ L + P + + Q++H I Q+
Sbjct: 104 LNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLH---------------------IASQI 142
Query: 209 HSALHCLHSQQIAHKDIRPENILMNGAVL-KLIDLGXXXXXXXX---------XLPDLEF 258
S + L SQ H+D+ N L+ +L K+ D G LP + +
Sbjct: 143 ASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLP-IRW 201
Query: 259 ASPEMLTSPATAGPSTDMWSLGVLLY-ILLSGVSPFLDESEEET 301
PE + S D+WS GV+L+ I G P+ S E
Sbjct: 202 MPPESIMYRKFTTES-DVWSFGVILWEIFTYGKQPWFQLSNTEV 244
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 43/219 (19%), Positives = 87/219 (39%), Gaps = 37/219 (16%)
Query: 105 LERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTALAL 164
+ ++G+G F V + + A+K + ++ + + E ++L + + I +
Sbjct: 40 IRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIV 99
Query: 165 FENAPVPGTDTIVMQLV-HGESLIQHLCRQST----ITESYICCIIRQLHSALHCLHSQQ 219
+ D + + G SL + + R + I + + CI ++ AL+ L
Sbjct: 100 KYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCI--EILKALNYLRKMS 157
Query: 220 IAHKDIRPENILMN--------------------------GAVLKLIDLGXXXXXXX--- 250
+ H D++PENIL++ +KLID G
Sbjct: 158 LTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHG 217
Query: 251 XXLPDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLSG 289
+ ++ +PE++ + S+DMWS G +L L +G
Sbjct: 218 SIINTRQYRAPEVILNLG-WDVSSDMWSFGCVLAELYTG 255
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 61/149 (40%), Gaps = 15/149 (10%)
Query: 106 ERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTALALF 165
E +G GRF V + + RG + VA+K + AE L H +I +A
Sbjct: 15 ESIGKGRFGEVWRGKWRG--EEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAAD 72
Query: 166 ENAPVPGTDTIVMQLVHGE-SLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ------ 218
T ++ H SL +L R + E I + S L LH +
Sbjct: 73 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLAL-STASGLAHLHMEIVGTQG 131
Query: 219 --QIAHKDIRPENILM--NGAVLKLIDLG 243
IAH+D++ +NIL+ NG + DLG
Sbjct: 132 KPAIAHRDLKSKNILVKKNGTCC-IADLG 159
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 61/149 (40%), Gaps = 15/149 (10%)
Query: 106 ERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTALALF 165
E +G GRF V + + RG + VA+K + AE L H +I +A
Sbjct: 12 ESIGKGRFGEVWRGKWRG--EEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAAD 69
Query: 166 ENAPVPGTDTIVMQLVHGE-SLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ------ 218
T ++ H SL +L R + E I + S L LH +
Sbjct: 70 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLAL-STASGLAHLHMEIVGTQG 128
Query: 219 --QIAHKDIRPENILM--NGAVLKLIDLG 243
IAH+D++ +NIL+ NG + DLG
Sbjct: 129 KPAIAHRDLKSKNILVKKNGTCC-IADLG 156
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 61/149 (40%), Gaps = 15/149 (10%)
Query: 106 ERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTALALF 165
E +G GRF V + + RG + VA+K + AE L H +I +A
Sbjct: 9 ESIGKGRFGEVWRGKWRG--EEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAAD 66
Query: 166 ENAPVPGTDTIVMQLVHGE-SLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ------ 218
T ++ H SL +L R + E I + S L LH +
Sbjct: 67 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLAL-STASGLAHLHMEIVGTQG 125
Query: 219 --QIAHKDIRPENILM--NGAVLKLIDLG 243
IAH+D++ +NIL+ NG + DLG
Sbjct: 126 KPAIAHRDLKSKNILVKKNGTCC-IADLG 153
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 61/149 (40%), Gaps = 15/149 (10%)
Query: 106 ERLGNGRFCTVRKARDRGTGQLVALKQIPRERQPQQITRAEYNLLSTLMHAHIPTALALF 165
E +G GRF V + + RG + VA+K + AE L H +I +A
Sbjct: 35 ESIGKGRFGEVWRGKWRG--EEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAAD 92
Query: 166 ENAPVPGTDTIVMQLVHGE-SLIQHLCRQSTITESYICCIIRQLHSALHCLHSQ------ 218
T ++ H SL +L R + E I + S L LH +
Sbjct: 93 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLAL-STASGLAHLHMEIVGTQG 151
Query: 219 --QIAHKDIRPENILM--NGAVLKLIDLG 243
IAH+D++ +NIL+ NG + DLG
Sbjct: 152 KPAIAHRDLKSKNILVKKNGTCC-IADLG 179
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 41/108 (37%), Gaps = 19/108 (17%)
Query: 256 LEFASPEMLTSPATAGP-------------STDMWSLGVLLYILLSGVSPFLDESEEETR 302
F SP +PA P S D WS VLL+ L++ PF D S E
Sbjct: 161 FSFQSPGRXYAPAWVAPEALQKKPEDTNRRSADXWSFAVLLWELVTREVPFADLSNXEIG 220
Query: 303 AHISVADY--SFPPEQCGHISVPARELIGQLLNTHADKRPTAGQLLQV 348
+++ + PP H+S +L N KRP ++ +
Sbjct: 221 XKVALEGLRPTIPPGISPHVS----KLXKICXNEDPAKRPKFDXIVPI 264
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 13/98 (13%)
Query: 207 QLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXX---------XXXXXXXLPDL 256
Q+ + L S++ H+D+ N+L+ V+K+ D G LP +
Sbjct: 150 QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP-V 208
Query: 257 EFASPEMLTSPATAGPSTDMWSLGVLLY-ILLSGVSPF 293
++ +PE L S D+WS GVLL+ I G SP+
Sbjct: 209 KWMAPEALFDRIYTHQS-DVWSFGVLLWEIFTLGGSPY 245
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 13/98 (13%)
Query: 207 QLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXX---------XXXXXXXLPDL 256
Q+ + L S++ H+D+ N+L+ V+K+ D G LP +
Sbjct: 147 QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP-V 205
Query: 257 EFASPEMLTSPATAGPSTDMWSLGVLLY-ILLSGVSPF 293
++ +PE L S D+WS GVLL+ I G SP+
Sbjct: 206 KWMAPEALFDRIYTHQS-DVWSFGVLLWEIFTLGGSPY 242
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 33.1 bits (74), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 13/98 (13%)
Query: 207 QLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXX---------XXXXXXXLPDL 256
Q+ + L S++ H+D+ N+L+ V+K+ D G LP +
Sbjct: 143 QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP-V 201
Query: 257 EFASPEMLTSPATAGPSTDMWSLGVLLY-ILLSGVSPF 293
++ +PE L S D+WS GVLL+ I G SP+
Sbjct: 202 KWMAPEALFDRIYTHQS-DVWSFGVLLWEIFTLGGSPY 238
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 13/98 (13%)
Query: 207 QLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXX---------XXXXXXXLPDL 256
Q+ + L S++ H+D+ N+L+ V+K+ D G LP +
Sbjct: 151 QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP-V 209
Query: 257 EFASPEMLTSPATAGPSTDMWSLGVLLY-ILLSGVSPF 293
++ +PE L S D+WS GVLL+ I G SP+
Sbjct: 210 KWMAPEALFDRIYTHQS-DVWSFGVLLWEIFTLGGSPY 246
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 13/98 (13%)
Query: 207 QLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXX---------XXXXXXXLPDL 256
Q+ + L S++ H+D+ N+L+ V+K+ D G LP +
Sbjct: 158 QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP-V 216
Query: 257 EFASPEMLTSPATAGPSTDMWSLGVLLY-ILLSGVSPF 293
++ +PE L S D+WS GVLL+ I G SP+
Sbjct: 217 KWMAPEALFDRIYTHQS-DVWSFGVLLWEIFTLGGSPY 253
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 13/98 (13%)
Query: 207 QLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXX---------XXXXXXXLPDL 256
Q+ + L S++ H+D+ N+L+ V+K+ D G LP +
Sbjct: 158 QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP-V 216
Query: 257 EFASPEMLTSPATAGPSTDMWSLGVLLY-ILLSGVSPF 293
++ +PE L S D+WS GVLL+ I G SP+
Sbjct: 217 KWMAPEALFDRIYTHQS-DVWSFGVLLWEIFTLGGSPY 253
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 13/98 (13%)
Query: 207 QLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXX---------XXXXXXXLPDL 256
Q+ + L S++ H+D+ N+L+ V+K+ D G LP +
Sbjct: 199 QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP-V 257
Query: 257 EFASPEMLTSPATAGPSTDMWSLGVLLY-ILLSGVSPF 293
++ +PE L S D+WS GVLL+ I G SP+
Sbjct: 258 KWMAPEALFDRIYTHQS-DVWSFGVLLWEIFTLGGSPY 294
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 13/98 (13%)
Query: 207 QLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXX---------XXXXXXXLPDL 256
Q+ + L S++ H+D+ N+L+ V+K+ D G LP +
Sbjct: 158 QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP-V 216
Query: 257 EFASPEMLTSPATAGPSTDMWSLGVLLY-ILLSGVSPF 293
++ +PE L S D+WS GVLL+ I G SP+
Sbjct: 217 KWMAPEALFDRIYTHQS-DVWSFGVLLWEIFTLGGSPY 253
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 51/121 (42%), Gaps = 11/121 (9%)
Query: 207 QLHSALHCLHSQQIAHKDIRPENILM-NGAVLKLIDLGXXX--------XXXXXXLPDLE 257
++ + L++++ H+D+ N ++ + +K+ D G L +
Sbjct: 137 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 196
Query: 258 FASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQ 316
+ +PE L S+DMWS GV+L+ + S P+ S E+ + Y P+
Sbjct: 197 WMAPESLKD-GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDN 255
Query: 317 C 317
C
Sbjct: 256 C 256
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 51/121 (42%), Gaps = 11/121 (9%)
Query: 207 QLHSALHCLHSQQIAHKDIRPENILM-NGAVLKLIDLGXXXXXXXXX--------LPDLE 257
++ + L++++ H+D+ N ++ + +K+ D G L +
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVR 197
Query: 258 FASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQ 316
+ +PE L S+DMWS GV+L+ + S P+ S E+ + Y P+
Sbjct: 198 WMAPESLKD-GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDN 256
Query: 317 C 317
C
Sbjct: 257 C 257
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 51/121 (42%), Gaps = 11/121 (9%)
Query: 207 QLHSALHCLHSQQIAHKDIRPENILM-NGAVLKLIDLGXX--------XXXXXXXLPDLE 257
++ + L++++ H+D+ N ++ + +K+ D G L +
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 197
Query: 258 FASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQ 316
+ +PE L S+DMWS GV+L+ + S P+ S E+ + Y P+
Sbjct: 198 WMAPESLKD-GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDN 256
Query: 317 C 317
C
Sbjct: 257 C 257
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 51/121 (42%), Gaps = 11/121 (9%)
Query: 207 QLHSALHCLHSQQIAHKDIRPENILM-NGAVLKLIDLGXXX--------XXXXXXLPDLE 257
++ + L++++ H+D+ N ++ + +K+ D G L +
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 197
Query: 258 FASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQ 316
+ +PE L S+DMWS GV+L+ + S P+ S E+ + Y P+
Sbjct: 198 WMAPESLKD-GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDN 256
Query: 317 C 317
C
Sbjct: 257 C 257
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 51/121 (42%), Gaps = 11/121 (9%)
Query: 207 QLHSALHCLHSQQIAHKDIRPENILM-NGAVLKLIDLGXXX--------XXXXXXLPDLE 257
++ + L++++ H+D+ N ++ + +K+ D G L +
Sbjct: 135 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 194
Query: 258 FASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQ 316
+ +PE L S+DMWS GV+L+ + S P+ S E+ + Y P+
Sbjct: 195 WMAPESLKD-GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDN 253
Query: 317 C 317
C
Sbjct: 254 C 254
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 13/98 (13%)
Query: 207 QLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLGXX---------XXXXXXXLPDL 256
Q+ + L S++ H+D+ N+L+ V+K+ D G LP +
Sbjct: 158 QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLP-V 216
Query: 257 EFASPEMLTSPATAGPSTDMWSLGVLLY-ILLSGVSPF 293
++ +PE L S D+WS GVLL+ I G SP+
Sbjct: 217 KWMAPEALFDRIYTHQS-DVWSFGVLLWEIFTLGGSPY 253
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 51/121 (42%), Gaps = 11/121 (9%)
Query: 207 QLHSALHCLHSQQIAHKDIRPENILM-NGAVLKLIDLGXXX--------XXXXXXLPDLE 257
++ + L++++ H+D+ N ++ + +K+ D G L +
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 197
Query: 258 FASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPFLDESEEETRAHISVADYSFPPEQ 316
+ +PE L S+DMWS GV+L+ + S P+ S E+ + Y P+
Sbjct: 198 WMAPESLKD-GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDN 256
Query: 317 C 317
C
Sbjct: 257 C 257
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 32.0 bits (71), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 52/264 (19%), Positives = 108/264 (40%), Gaps = 37/264 (14%)
Query: 99 EHRYEELERLGNGRFCTVRKARDRGTGQLV----ALKQIPRERQPQ---QITRAEYNLLS 151
E +++++ LG+G F TV K G+ V A+K++ P+ +I Y +++
Sbjct: 16 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY-VMA 74
Query: 152 TLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR-QSTITESYICCIIRQLHS 210
++ + H+ L + + V ++ QL+ L+ ++ + I Y+ Q+
Sbjct: 75 SVDNPHVCRLLGICLTSTV----QLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 130
Query: 211 ALHCLHSQQIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXX---------XLPDLEFAS 260
++ L +++ H+D+ N+L+ +K+ D G +P A
Sbjct: 131 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMAL 190
Query: 261 PEMLTSPATAGPSTDMWSLGVLLYILL------------SGVSPFLDESEEETRAHISVA 308
+L T +D+WS GV ++ L+ S +S L++ E + I
Sbjct: 191 ESILHRIYTH--QSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTI 248
Query: 309 DYSFPPEQCGHISVPARELIGQLL 332
D +C I +R +L+
Sbjct: 249 DVYMIMRKCWMIDADSRPKFRELI 272
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 32.0 bits (71), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 52/264 (19%), Positives = 108/264 (40%), Gaps = 37/264 (14%)
Query: 99 EHRYEELERLGNGRFCTVRKARDRGTGQLV----ALKQIPRERQPQ---QITRAEYNLLS 151
E +++++ LG+G F TV K G+ V A+K++ P+ +I Y +++
Sbjct: 17 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY-VMA 75
Query: 152 TLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR-QSTITESYICCIIRQLHS 210
++ + H+ L + + V ++ QL+ L+ ++ + I Y+ Q+
Sbjct: 76 SVDNPHVCRLLGICLTSTV----QLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 131
Query: 211 ALHCLHSQQIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXX---------XLPDLEFAS 260
++ L +++ H+D+ N+L+ +K+ D G +P A
Sbjct: 132 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 191
Query: 261 PEMLTSPATAGPSTDMWSLGVLLYILL------------SGVSPFLDESEEETRAHISVA 308
+L T +D+WS GV ++ L+ S +S L++ E + I
Sbjct: 192 ESILHRIYTH--QSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTI 249
Query: 309 DYSFPPEQCGHISVPARELIGQLL 332
D +C I +R +L+
Sbjct: 250 DVYMIMRKCWMIDADSRPKFRELI 273
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 32.0 bits (71), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 52/264 (19%), Positives = 108/264 (40%), Gaps = 37/264 (14%)
Query: 99 EHRYEELERLGNGRFCTVRKARDRGTGQLV----ALKQIPRERQPQ---QITRAEYNLLS 151
E +++++ LG+G F TV K G+ V A+K++ P+ +I Y +++
Sbjct: 24 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY-VMA 82
Query: 152 TLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR-QSTITESYICCIIRQLHS 210
++ + H+ L + + V ++ QL+ L+ ++ + I Y+ Q+
Sbjct: 83 SVDNPHVCRLLGICLTSTV----QLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAK 138
Query: 211 ALHCLHSQQIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXX---------XLPDLEFAS 260
++ L +++ H+D+ N+L+ +K+ D G +P A
Sbjct: 139 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 198
Query: 261 PEMLTSPATAGPSTDMWSLGVLLYILL------------SGVSPFLDESEEETRAHISVA 308
+L T +D+WS GV ++ L+ S +S L++ E + I
Sbjct: 199 ESILHRIYTH--QSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTI 256
Query: 309 DYSFPPEQCGHISVPARELIGQLL 332
D +C I +R +L+
Sbjct: 257 DVYMIMRKCWMIDADSRPKFRELI 280
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 32.0 bits (71), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 94/214 (43%), Gaps = 26/214 (12%)
Query: 99 EHRYEELERLGNGRFCTVRKARDRGTGQLV----ALKQIPRERQPQ---QITRAEYNLLS 151
E +++++ LG+G F TV K G+ V A+K++ P+ +I Y +++
Sbjct: 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY-VMA 72
Query: 152 TLMHAHIPTALALFENAPVPGTDTIVMQLVHGESLIQHLCR-QSTITESYICCIIRQLHS 210
++ + H+ L + + V ++ QL+ L+ ++ + I Y+ Q+
Sbjct: 73 SVDNPHVCRLLGICLTSTV----QLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAK 128
Query: 211 ALHCLHSQQIAHKDIRPENILMNGAV-LKLIDLGXXXXXXXX---------XLPDLEFAS 260
++ L +++ H+D+ N+L+ +K+ D G +P A
Sbjct: 129 GMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMAL 188
Query: 261 PEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPF 293
+L T +D+WS GV ++ L++ G P+
Sbjct: 189 ESILHRIYTH--QSDVWSYGVTVWELMTFGSKPY 220
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 32.0 bits (71), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 47/108 (43%), Gaps = 10/108 (9%)
Query: 194 STITESYICCIIRQLHSALHCLHSQQIAHKDIRPENILMN-GAVLKLIDLG------XXX 246
ST++ + + + L +Q H+D+ NIL+ V K+ D G
Sbjct: 137 STLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV 196
Query: 247 XXXXXXLPDLEFASPEMLTSPATAGPSTDMWSLGVLLYILLS-GVSPF 293
LP A + S T ++D+WS GVLL+ ++S G +P+
Sbjct: 197 KKTMGRLPVRWMAIESLNYSVYTT--NSDVWSYGVLLWEIVSLGGTPY 242
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.134 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,367,153
Number of Sequences: 62578
Number of extensions: 460076
Number of successful extensions: 3220
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 668
Number of HSP's successfully gapped in prelim test: 379
Number of HSP's that attempted gapping in prelim test: 1100
Number of HSP's gapped (non-prelim): 1089
length of query: 380
length of database: 14,973,337
effective HSP length: 101
effective length of query: 279
effective length of database: 8,652,959
effective search space: 2414175561
effective search space used: 2414175561
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)