BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy111
(85 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6AYS4|FUCO2_RAT Plasma alpha-L-fucosidase OS=Rattus norvegicus GN=Fuca2 PE=2 SV=1
Length = 459
Score = 100 bits (250), Expect = 2e-21, Method: Composition-based stats.
Identities = 42/79 (53%), Positives = 55/79 (69%)
Query: 1 SVVVNDRWCNTCLCKHGGYLTCEDKYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILN 60
+VV NDRW +CKHGGY TC D+YNPG K+ENC T+DK+SWGYRR+A I D L
Sbjct: 248 TVVTNDRWGAGSICKHGGYYTCSDRYNPGHLLPHKWENCMTIDKFSWGYRREAEIGDYLT 307
Query: 61 MTEVLQTMMNTVSFGDKTL 79
+ E+++ ++ TVS G L
Sbjct: 308 IEELVKQLVETVSCGGNLL 326
>sp|Q9BTY2|FUCO2_HUMAN Plasma alpha-L-fucosidase OS=Homo sapiens GN=FUCA2 PE=1 SV=2
Length = 467
Score = 99.0 bits (245), Expect = 7e-21, Method: Composition-based stats.
Identities = 44/94 (46%), Positives = 60/94 (63%), Gaps = 11/94 (11%)
Query: 1 SVVVNDRWCNTCLCKHGGYLTCEDKYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILN 60
+VV NDRW +CKHGG+ TC D+YNPG K+ENC T+DK SWGYRR+A I D L
Sbjct: 256 TVVTNDRWGAGSICKHGGFYTCSDRYNPGHLLPHKWENCMTIDKLSWGYRREAGISDYLT 315
Query: 61 MTEVLQTMMNTVSFG-----------DKTLSILF 83
+ E+++ ++ TVS G D T+S++F
Sbjct: 316 IEELVKQLVETVSCGGNLLMNIGPTLDGTISVVF 349
>sp|Q99KR8|FUCO2_MOUSE Plasma alpha-L-fucosidase OS=Mus musculus GN=Fuca2 PE=2 SV=1
Length = 461
Score = 99.0 bits (245), Expect = 8e-21, Method: Composition-based stats.
Identities = 41/79 (51%), Positives = 55/79 (69%)
Query: 1 SVVVNDRWCNTCLCKHGGYLTCEDKYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILN 60
+VV NDRW +CKHGGY TC D+YNPG K+ENC T+DK+SWGYRR+A I D L
Sbjct: 250 TVVTNDRWGVGSICKHGGYYTCSDRYNPGYLLPHKWENCMTIDKFSWGYRREAEISDYLT 309
Query: 61 MTEVLQTMMNTVSFGDKTL 79
+ E+++ ++ TV+ G L
Sbjct: 310 IEELVKKLVETVACGGNLL 328
>sp|C3YWU0|FUCO_BRAFL Alpha-L-fucosidase OS=Branchiostoma floridae GN=BRAFLDRAFT_56888
PE=3 SV=2
Length = 449
Score = 96.3 bits (238), Expect = 4e-20, Method: Composition-based stats.
Identities = 41/79 (51%), Positives = 55/79 (69%)
Query: 1 SVVVNDRWCNTCLCKHGGYLTCEDKYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILN 60
+VV NDRW + LC HGGY TC D+YNPG Q K+ENC T+DK SWG+RR+A + D L+
Sbjct: 241 TVVTNDRWGSGMLCHHGGYYTCSDRYNPGVLQKHKWENCMTIDKKSWGFRREATLADYLD 300
Query: 61 MTEVLQTMMNTVSFGDKTL 79
M ++++ + TVS G L
Sbjct: 301 MDDLVKILAETVSCGGNLL 319
>sp|Q5RFI5|FUCO2_PONAB Plasma alpha-L-fucosidase OS=Pongo abelii GN=FUCA2 PE=2 SV=1
Length = 465
Score = 94.7 bits (234), Expect = 2e-19, Method: Composition-based stats.
Identities = 43/94 (45%), Positives = 59/94 (62%), Gaps = 11/94 (11%)
Query: 1 SVVVNDRWCNTCLCKHGGYLTCEDKYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILN 60
+VV NDRW + KHGG+ TC D+YNPG K+ENC T+DK SWGYRR+A I D L
Sbjct: 254 TVVTNDRWGAGSIYKHGGFYTCSDRYNPGHLLPHKWENCMTIDKLSWGYRREAGISDYLT 313
Query: 61 MTEVLQTMMNTVSFG-----------DKTLSILF 83
+ E+++ ++ TVS G D T+S++F
Sbjct: 314 IEELVKQLVETVSCGGNLLMNIGPTLDGTISVVF 347
>sp|P04066|FUCO_HUMAN Tissue alpha-L-fucosidase OS=Homo sapiens GN=FUCA1 PE=1 SV=4
Length = 466
Score = 92.4 bits (228), Expect = 7e-19, Method: Composition-based stats.
Identities = 37/78 (47%), Positives = 49/78 (62%)
Query: 2 VVVNDRWCNTCLCKHGGYLTCEDKYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILNM 61
VVVNDRW C C HGGY CEDK+ P K+E C ++DK+SWGYRRD + D+
Sbjct: 259 VVVNDRWGQNCSCHHGGYYNCEDKFKPQSLPDHKWEMCTSIDKFSWGYRRDMALSDVTEE 318
Query: 62 TEVLQTMMNTVSFGDKTL 79
+E++ ++ TVS G L
Sbjct: 319 SEIISELVQTVSLGGNYL 336
>sp|P17164|FUCO_RAT Tissue alpha-L-fucosidase OS=Rattus norvegicus GN=Fuca1 PE=1 SV=1
Length = 462
Score = 91.7 bits (226), Expect = 1e-18, Method: Composition-based stats.
Identities = 37/78 (47%), Positives = 51/78 (65%)
Query: 2 VVVNDRWCNTCLCKHGGYLTCEDKYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILNM 61
VVVNDRW C C+HGGY CEDKY P K+E C ++DK SWGYRRD ++ I++
Sbjct: 255 VVVNDRWGQNCSCRHGGYYNCEDKYRPHSLPDHKWEMCTSVDKASWGYRRDMSMSTIVDE 314
Query: 62 TEVLQTMMNTVSFGDKTL 79
E+++ ++ T+S G L
Sbjct: 315 NEIIEELVQTISLGGNYL 332
>sp|Q60HF8|FUCO_MACFA Tissue alpha-L-fucosidase OS=Macaca fascicularis GN=FUCA1 PE=2 SV=1
Length = 468
Score = 91.7 bits (226), Expect = 1e-18, Method: Composition-based stats.
Identities = 37/78 (47%), Positives = 49/78 (62%)
Query: 2 VVVNDRWCNTCLCKHGGYLTCEDKYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILNM 61
VVVNDRW C C HGGY CEDK+ P K+E C ++DK+SWGYRRD + D+
Sbjct: 261 VVVNDRWGQNCSCHHGGYYNCEDKFKPQSLPDHKWEMCTSIDKFSWGYRRDMAMSDVTEE 320
Query: 62 TEVLQTMMNTVSFGDKTL 79
+E++ ++ TVS G L
Sbjct: 321 SEIISELVQTVSLGGNYL 338
>sp|Q2KIM0|FUCO_BOVIN Tissue alpha-L-fucosidase OS=Bos taurus GN=FUCA1 PE=2 SV=1
Length = 468
Score = 87.0 bits (214), Expect = 3e-17, Method: Composition-based stats.
Identities = 36/78 (46%), Positives = 48/78 (61%)
Query: 2 VVVNDRWCNTCLCKHGGYLTCEDKYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILNM 61
VVVNDRW C C HGGY C+DK+ P K+E C ++D+ SWGYRRD + DI N
Sbjct: 262 VVVNDRWGQNCSCHHGGYYNCKDKFQPETLPDHKWEMCTSIDQRSWGYRRDMEMADITNE 321
Query: 62 TEVLQTMMNTVSFGDKTL 79
+ ++ ++ TVS G L
Sbjct: 322 STIISELVQTVSLGGNYL 339
>sp|Q99LJ1|FUCO_MOUSE Tissue alpha-L-fucosidase OS=Mus musculus GN=Fuca1 PE=2 SV=1
Length = 452
Score = 85.9 bits (211), Expect = 7e-17, Method: Composition-based stats.
Identities = 34/78 (43%), Positives = 47/78 (60%)
Query: 2 VVVNDRWCNTCLCKHGGYLTCEDKYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILNM 61
V+VNDRW C C HGGY C+DKY P K+E C ++D+ SWGYR+D + I
Sbjct: 245 VIVNDRWGQNCSCHHGGYYNCQDKYKPQSLPDHKWEMCTSMDRASWGYRKDMTMSTIAKE 304
Query: 62 TEVLQTMMNTVSFGDKTL 79
E+++ ++ TVS G L
Sbjct: 305 NEIIEELVQTVSLGGNYL 322
>sp|P48300|FUCO_CANFA Tissue alpha-L-fucosidase OS=Canis familiaris GN=FUCA1 PE=2 SV=1
Length = 465
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 48/78 (61%)
Query: 2 VVVNDRWCNTCLCKHGGYLTCEDKYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILNM 61
VVVNDRW C C HGGY C+DKY P K+E C ++DK SWGYRR+ + D+ +
Sbjct: 259 VVVNDRWGQNCSCHHGGYYNCQDKYKPESLPDLKWEMCTSIDKVSWGYRRNMVMSDVASE 318
Query: 62 TEVLQTMMNTVSFGDKTL 79
E++ ++ TVS G L
Sbjct: 319 CEIISELVQTVSLGGNYL 336
>sp|P49713|FUCO_CAEEL Putative alpha-L-fucosidase OS=Caenorhabditis elegans GN=W03G11.3
PE=3 SV=2
Length = 482
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 48/72 (66%)
Query: 2 VVVNDRWCNTCLCKHGGYLTCEDKYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILNM 61
VVVNDRW + KHGG++T D Y+PGK +K+ENC TLDK+SWG RRD ++
Sbjct: 239 VVVNDRWGTGTMGKHGGFMTYSDHYDPGKLLEKKWENCMTLDKHSWGNRRDMKASEVNTA 298
Query: 62 TEVLQTMMNTVS 73
E+++ + T++
Sbjct: 299 YEIIEQLARTIA 310
>sp|Q9VTJ4|FUCO_DROME Putative alpha-L-fucosidase OS=Drosophila melanogaster GN=Fuca PE=2
SV=2
Length = 494
Score = 79.7 bits (195), Expect = 5e-15, Method: Composition-based stats.
Identities = 33/73 (45%), Positives = 47/73 (64%)
Query: 1 SVVVNDRWCNTCLCKHGGYLTCEDKYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILN 60
+VV NDRW C HG + C D++NPG Q+ K+EN FTLD+ SWG R D ++ D +
Sbjct: 256 TVVTNDRWGFGTACMHGDFYNCADRFNPGVLQAHKWENAFTLDRTSWGQRFDVSLSDFMT 315
Query: 61 MTEVLQTMMNTVS 73
EV++ ++ TVS
Sbjct: 316 SKEVIKEIITTVS 328
>sp|P10901|FUCO_DICDI Alpha-L-fucosidase OS=Dictyostelium discoideum GN=alfA PE=3 SV=1
Length = 461
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 48/79 (60%), Gaps = 1/79 (1%)
Query: 1 SVVVNDRWCNTCLCKHGGYLTCEDKYNPGKFQSRKFENCFTLDKYSWGYRRDANIDDILN 60
+V+VNDRW + C K+GG+ T D +NP K QS K+ENC T+ YS+GY D N
Sbjct: 250 TVIVNDRWGSECRDKNGGFYTGADHFNPYKLQSHKWENCATI-GYSYGYDEYEQATDYQN 308
Query: 61 MTEVLQTMMNTVSFGDKTL 79
TE++ ++ TV+ G L
Sbjct: 309 ATELIIDLVTTVACGGNFL 327
>sp|A1APP9|SELD_PELPD Selenide, water dikinase OS=Pelobacter propionicus (strain DSM
2379) GN=selD PE=3 SV=1
Length = 348
Score = 30.4 bits (67), Expect = 3.2, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 43 DKYSWGYRRDAN-IDDILNMTEVLQTMMNTVSFGDKTLSI 81
D YS+G AN + DI M V +T MN V+F KT+ I
Sbjct: 75 DPYSFGQIAAANALSDIYAMGGVPKTAMNVVAFPAKTMDI 114
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.137 0.449
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,485,082
Number of Sequences: 539616
Number of extensions: 1090235
Number of successful extensions: 1606
Number of sequences better than 100.0: 16
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1591
Number of HSP's gapped (non-prelim): 16
length of query: 85
length of database: 191,569,459
effective HSP length: 56
effective length of query: 29
effective length of database: 161,350,963
effective search space: 4679177927
effective search space used: 4679177927
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)