Query psy1110
Match_columns 366
No_of_seqs 234 out of 2240
Neff 7.0
Searched_HMMs 29240
Date Fri Aug 16 17:58:32 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1110.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1110hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3apo_A DNAJ homolog subfamily 100.0 2E-33 6.9E-38 300.8 9.3 301 12-366 369-685 (780)
2 3uem_A Protein disulfide-isome 100.0 2.1E-29 7.2E-34 245.9 9.6 282 15-323 55-357 (361)
3 3apo_A DNAJ homolog subfamily 100.0 1.1E-29 3.9E-34 271.7 6.0 271 15-324 478-768 (780)
4 3idv_A Protein disulfide-isome 99.9 1.5E-26 5E-31 212.0 16.0 182 15-325 55-239 (241)
5 2ywm_A Glutaredoxin-like prote 99.9 1.5E-24 5E-29 198.3 9.9 169 15-322 48-219 (229)
6 1a8l_A Protein disulfide oxido 99.9 1.9E-24 6.6E-29 196.7 10.5 180 13-321 40-224 (226)
7 3idv_A Protein disulfide-isome 99.9 1.2E-22 4.2E-27 185.8 13.8 144 98-366 14-157 (241)
8 3f8u_A Protein disulfide-isome 99.9 4.1E-22 1.4E-26 201.6 16.0 191 15-325 260-463 (481)
9 2b5e_A Protein disulfide-isome 99.9 7.3E-22 2.5E-26 201.2 15.0 189 15-325 260-469 (504)
10 1sji_A Calsequestrin 2, calseq 99.9 4.6E-21 1.6E-25 186.8 15.0 135 97-366 9-152 (350)
11 3us3_A Calsequestrin-1; calciu 99.8 4.6E-21 1.6E-25 188.6 12.7 137 96-366 10-154 (367)
12 3uem_A Protein disulfide-isome 99.8 1.3E-20 4.6E-25 183.5 14.5 170 14-187 157-343 (361)
13 2r2j_A Thioredoxin domain-cont 99.8 3.1E-21 1E-25 190.5 9.5 139 99-366 5-145 (382)
14 3f8u_A Protein disulfide-isome 99.8 9.2E-21 3.1E-25 191.7 12.8 133 99-365 1-137 (481)
15 3ed3_A Protein disulfide-isome 99.8 3.2E-20 1.1E-24 177.9 15.3 135 96-364 14-169 (298)
16 2b5e_A Protein disulfide-isome 99.8 1.4E-20 5E-25 191.6 13.5 138 93-365 8-149 (504)
17 3h79_A Thioredoxin-like protei 99.8 2.1E-20 7E-25 155.5 9.9 112 96-321 12-126 (127)
18 2hls_A Protein disulfide oxido 99.8 4.9E-21 1.7E-25 178.3 6.8 176 11-324 42-227 (243)
19 2dj1_A Protein disulfide-isome 99.8 4.9E-20 1.7E-24 155.0 11.4 116 98-330 16-131 (140)
20 3zzx_A Thioredoxin; oxidoreduc 99.8 1.7E-20 5.9E-25 152.8 8.1 99 102-321 3-104 (105)
21 1mek_A Protein disulfide isome 99.8 5.5E-20 1.9E-24 149.3 9.8 113 97-325 5-119 (120)
22 2voc_A Thioredoxin; electron t 99.8 1.4E-19 4.8E-24 147.2 12.0 106 101-326 3-108 (112)
23 1sji_A Calsequestrin 2, calseq 99.8 5.9E-19 2E-23 171.9 17.6 190 15-365 57-254 (350)
24 3us3_A Calsequestrin-1; calciu 99.8 5.8E-19 2E-23 173.5 16.9 190 15-365 59-256 (367)
25 1x5d_A Protein disulfide-isome 99.8 7.5E-20 2.6E-24 152.1 8.4 113 98-325 6-119 (133)
26 3gnj_A Thioredoxin domain prot 99.8 2.1E-19 7.3E-24 144.5 9.6 105 99-322 4-109 (111)
27 3tco_A Thioredoxin (TRXA-1); d 99.8 1.9E-19 6.4E-24 144.0 8.9 105 99-322 4-108 (109)
28 1nsw_A Thioredoxin, TRX; therm 99.8 3.9E-19 1.3E-23 141.8 10.4 103 101-322 2-104 (105)
29 3die_A Thioredoxin, TRX; elect 99.8 4.4E-19 1.5E-23 141.3 10.3 103 100-322 4-106 (106)
30 3uvt_A Thioredoxin domain-cont 99.8 1.9E-19 6.6E-24 144.6 7.9 107 98-321 4-110 (111)
31 2qgv_A Hydrogenase-1 operon pr 99.8 5.6E-20 1.9E-24 157.5 4.7 109 100-326 18-128 (140)
32 2qsi_A Putative hydrogenase ex 99.8 2.4E-19 8.1E-24 153.0 8.6 105 99-322 15-122 (137)
33 2yzu_A Thioredoxin; redox prot 99.8 6.2E-19 2.1E-23 140.7 10.1 105 100-323 2-106 (109)
34 1x5e_A Thioredoxin domain cont 99.8 7.7E-19 2.6E-23 145.4 10.9 115 98-335 6-120 (126)
35 2trx_A Thioredoxin; electron t 99.8 5.5E-19 1.9E-23 141.6 9.2 104 99-321 2-106 (108)
36 4euy_A Uncharacterized protein 99.8 4E-19 1.4E-23 142.7 8.1 98 105-322 7-104 (105)
37 2i4a_A Thioredoxin; acidophIle 99.8 1.2E-18 4.2E-23 138.9 10.8 104 99-321 2-106 (107)
38 3p2a_A Thioredoxin 2, putative 99.8 5E-19 1.7E-23 150.9 9.0 108 98-324 37-144 (148)
39 2wz9_A Glutaredoxin-3; protein 99.8 6.3E-19 2.2E-23 151.8 9.4 129 98-355 11-142 (153)
40 2ppt_A Thioredoxin-2; thiredox 99.8 7.3E-19 2.5E-23 152.4 9.3 107 98-323 46-152 (155)
41 2av4_A Thioredoxin-like protei 99.8 1.3E-18 4.3E-23 151.5 10.6 102 101-321 23-137 (160)
42 2dml_A Protein disulfide-isome 99.8 1.5E-18 5.2E-23 144.0 10.4 111 94-323 12-124 (130)
43 2o8v_B Thioredoxin 1; disulfid 99.8 1.4E-18 4.8E-23 145.5 10.0 106 97-321 20-126 (128)
44 3ga4_A Dolichyl-diphosphooligo 99.8 1.1E-18 3.8E-23 155.4 9.8 124 99-336 18-166 (178)
45 3hz4_A Thioredoxin; NYSGXRC, P 99.8 1.6E-18 5.6E-23 146.9 9.8 107 98-323 5-112 (140)
46 1thx_A Thioredoxin, thioredoxi 99.8 2E-18 6.8E-23 139.5 9.2 106 98-322 6-112 (115)
47 1oaz_A Thioredoxin 1; immune s 99.8 1.9E-18 6.4E-23 143.9 9.2 77 246-322 46-122 (123)
48 2l5l_A Thioredoxin; structural 99.8 2.7E-18 9.2E-23 144.7 10.3 109 98-326 8-129 (136)
49 3qfa_C Thioredoxin; protein-pr 99.8 6.8E-19 2.3E-23 144.5 6.4 105 96-321 9-115 (116)
50 1dby_A Chloroplast thioredoxin 99.7 2.5E-18 8.6E-23 137.5 8.9 104 100-322 2-106 (107)
51 1t00_A Thioredoxin, TRX; redox 99.7 4.7E-18 1.6E-22 137.2 10.4 105 99-322 5-110 (112)
52 2djj_A PDI, protein disulfide- 99.7 4.2E-18 1.4E-22 139.4 10.2 110 97-323 5-117 (121)
53 3apq_A DNAJ homolog subfamily 99.7 1.4E-18 4.7E-23 157.3 7.7 111 96-325 94-204 (210)
54 2i1u_A Thioredoxin, TRX, MPT46 99.7 4.7E-18 1.6E-22 138.9 10.1 107 98-323 11-118 (121)
55 1syr_A Thioredoxin; SGPP, stru 99.7 5E-18 1.7E-22 137.8 9.9 105 97-322 7-111 (112)
56 1w4v_A Thioredoxin, mitochondr 99.7 2.5E-18 8.4E-23 141.5 8.0 106 97-321 11-117 (119)
57 3ul3_B Thioredoxin, thioredoxi 99.7 4.7E-18 1.6E-22 141.6 9.6 100 103-321 29-128 (128)
58 3qou_A Protein YBBN; thioredox 99.7 6.3E-18 2.2E-22 159.3 11.2 105 99-322 7-113 (287)
59 3dxb_A Thioredoxin N-terminall 99.7 6.9E-18 2.3E-22 154.3 11.1 112 96-326 9-121 (222)
60 3hxs_A Thioredoxin, TRXP; elec 99.7 4.9E-18 1.7E-22 143.1 9.3 107 97-323 20-139 (141)
61 2r2j_A Thioredoxin domain-cont 99.7 3.5E-17 1.2E-21 161.4 16.6 191 15-366 45-246 (382)
62 1xwb_A Thioredoxin; dimerizati 99.7 8.4E-18 2.9E-22 133.8 9.8 101 101-321 2-105 (106)
63 1gh2_A Thioredoxin-like protei 99.7 6E-18 2.1E-22 135.9 8.7 100 101-321 3-105 (107)
64 2e0q_A Thioredoxin; electron t 99.7 4E-18 1.4E-22 134.6 7.6 102 101-322 1-102 (104)
65 2dj3_A Protein disulfide-isome 99.7 4.8E-18 1.6E-22 141.5 8.4 111 98-325 6-120 (133)
66 1fb6_A Thioredoxin M; electron 99.7 5.3E-18 1.8E-22 134.8 8.3 102 101-321 2-104 (105)
67 2l57_A Uncharacterized protein 99.7 2.9E-18 9.8E-23 141.9 6.9 110 101-329 6-123 (126)
68 1ep7_A Thioredoxin CH1, H-type 99.7 9.2E-18 3.1E-22 135.3 9.7 104 99-322 2-110 (112)
69 3aps_A DNAJ homolog subfamily 99.7 3.9E-18 1.3E-22 140.0 7.5 107 98-323 2-113 (122)
70 3f3q_A Thioredoxin-1; His TAG, 99.7 6.9E-18 2.4E-22 136.8 8.6 101 100-321 8-108 (109)
71 2pu9_C TRX-F, thioredoxin F-ty 99.7 1.5E-17 5E-22 134.5 10.4 103 98-321 4-109 (111)
72 2dj0_A Thioredoxin-related tra 99.7 2.3E-18 8E-23 145.1 5.2 106 98-321 6-119 (137)
73 1zma_A Bacterocin transport ac 99.7 5.5E-18 1.9E-22 138.8 7.3 106 100-320 13-118 (118)
74 1r26_A Thioredoxin; redox-acti 99.7 1.6E-17 5.3E-22 138.8 9.8 101 100-321 20-121 (125)
75 3d6i_A Monothiol glutaredoxin- 99.7 1.9E-17 6.4E-22 133.9 9.9 103 101-322 2-108 (112)
76 2l6c_A Thioredoxin; oxidoreduc 99.7 9E-18 3.1E-22 136.3 7.6 105 100-325 4-108 (110)
77 2xc2_A Thioredoxinn; oxidoredu 99.7 1E-17 3.4E-22 136.9 7.6 100 100-321 14-116 (117)
78 3q6o_A Sulfhydryl oxidase 1; p 99.7 4.8E-17 1.6E-21 150.3 13.0 147 95-364 8-165 (244)
79 1faa_A Thioredoxin F; electron 99.7 2E-17 6.9E-22 136.3 9.3 104 97-321 16-122 (124)
80 3gix_A Thioredoxin-like protei 99.7 1.5E-17 5.2E-22 143.2 8.6 100 103-321 8-119 (149)
81 1v98_A Thioredoxin; oxidoreduc 99.7 1.6E-17 5.5E-22 140.3 7.6 105 99-322 33-137 (140)
82 2es7_A Q8ZP25_salty, putative 99.7 4.9E-18 1.7E-22 145.7 4.4 106 100-325 18-127 (142)
83 2vim_A Thioredoxin, TRX; thior 99.7 2.7E-17 9.2E-22 130.4 8.4 99 102-321 2-103 (104)
84 3m9j_A Thioredoxin; oxidoreduc 99.7 3.1E-17 1.1E-21 130.4 7.8 96 105-321 7-104 (105)
85 2oe3_A Thioredoxin-3; electron 99.7 3.4E-17 1.2E-21 134.2 8.2 101 99-320 12-113 (114)
86 3evi_A Phosducin-like protein 99.7 1.2E-16 4E-21 133.0 11.1 100 99-321 3-112 (118)
87 1xfl_A Thioredoxin H1; AT3G510 99.7 5.7E-17 2E-21 134.8 9.1 105 97-322 14-123 (124)
88 2vlu_A Thioredoxin, thioredoxi 99.7 4E-17 1.4E-21 133.9 7.8 103 99-322 13-119 (122)
89 3emx_A Thioredoxin; structural 99.7 1.9E-17 6.6E-22 139.5 5.8 114 98-325 15-128 (135)
90 3d22_A TRXH4, thioredoxin H-ty 99.7 5.5E-17 1.9E-21 136.4 7.9 107 98-325 23-134 (139)
91 2j23_A Thioredoxin; immune pro 99.7 6.6E-17 2.2E-21 133.4 7.3 105 99-322 15-120 (121)
92 1qgv_A Spliceosomal protein U5 99.7 2.2E-16 7.6E-21 134.8 10.8 98 105-321 10-119 (142)
93 2vm1_A Thioredoxin, thioredoxi 99.7 1E-16 3.6E-21 130.1 7.8 104 99-323 6-114 (118)
94 2ywm_A Glutaredoxin-like prote 99.7 8.3E-17 2.8E-21 146.7 7.8 86 268-366 60-146 (229)
95 1ti3_A Thioredoxin H, PTTRXH1; 99.7 1.6E-16 5.4E-21 128.0 8.4 102 99-321 4-110 (113)
96 2f51_A Thioredoxin; electron t 99.7 1.3E-16 4.3E-21 131.4 7.1 105 100-325 4-115 (118)
97 3t58_A Sulfhydryl oxidase 1; o 99.7 6E-16 2E-20 159.0 13.5 147 96-364 9-165 (519)
98 2dbc_A PDCL2, unnamed protein 99.6 6.1E-16 2.1E-20 130.6 11.2 102 98-322 9-120 (135)
99 2yj7_A LPBCA thioredoxin; oxid 99.4 1.3E-17 4.6E-22 132.0 0.0 102 101-321 3-105 (106)
100 2c0g_A ERP29 homolog, windbeut 99.6 4.6E-16 1.6E-20 145.5 9.7 104 98-323 15-132 (248)
101 3cxg_A Putative thioredoxin; m 99.6 1.8E-16 6.1E-21 133.5 6.2 104 98-323 19-129 (133)
102 2kuc_A Putative disulphide-iso 99.6 2.4E-16 8.3E-21 130.6 6.0 106 101-325 8-123 (130)
103 2trc_P Phosducin, MEKA, PP33; 99.6 3.2E-16 1.1E-20 143.7 6.8 105 97-322 97-212 (217)
104 1wmj_A Thioredoxin H-type; str 99.6 1.1E-16 3.9E-21 132.2 3.1 107 98-325 13-124 (130)
105 2qc7_A ERP31, ERP28, endoplasm 99.6 1.6E-15 5.4E-20 141.3 10.4 103 99-322 5-118 (240)
106 1a8l_A Protein disulfide oxido 99.6 5.8E-16 2E-20 140.5 6.7 86 268-366 55-144 (226)
107 3fk8_A Disulphide isomerase; A 99.6 1.7E-15 5.7E-20 126.4 8.4 54 268-321 64-131 (133)
108 1a0r_P Phosducin, MEKA, PP33; 99.6 2.7E-15 9.4E-20 140.0 8.6 105 97-322 110-225 (245)
109 3qcp_A QSOX from trypanosoma b 99.6 8.6E-16 2.9E-20 155.3 5.2 118 94-323 18-139 (470)
110 2fwh_A Thiol:disulfide interch 99.6 3E-15 1E-19 125.7 7.0 54 269-322 67-127 (134)
111 3f9u_A Putative exported cytoc 99.5 4.6E-15 1.6E-19 129.3 6.9 127 101-321 28-164 (172)
112 1wou_A Thioredoxin -related pr 99.5 7.9E-15 2.7E-19 121.4 8.0 50 100-149 6-64 (123)
113 1fo5_A Thioredoxin; disulfide 99.5 1E-14 3.5E-19 111.5 7.9 50 268-321 35-84 (85)
114 2h30_A Thioredoxin, peptide me 99.5 6.9E-15 2.3E-19 126.1 6.5 133 100-323 22-156 (164)
115 2djk_A PDI, protein disulfide- 99.5 1.5E-14 5.2E-19 121.7 8.4 102 100-322 7-114 (133)
116 1nho_A Probable thioredoxin; b 99.5 9.4E-15 3.2E-19 111.7 6.5 51 268-322 34-84 (85)
117 2lst_A Thioredoxin; structural 99.3 7.2E-16 2.5E-20 127.9 0.0 58 268-325 55-118 (130)
118 3iv4_A Putative oxidoreductase 99.5 6.5E-14 2.2E-18 115.2 8.3 98 100-318 7-111 (112)
119 3ed3_A Protein disulfide-isome 99.5 1.4E-12 4.8E-17 124.7 18.4 118 15-155 58-196 (298)
120 2ju5_A Thioredoxin disulfide i 99.5 6.2E-14 2.1E-18 120.7 7.2 100 114-322 45-151 (154)
121 1sen_A Thioredoxin-like protei 99.5 4.6E-14 1.6E-18 123.1 6.2 49 107-155 37-85 (164)
122 4f9z_D Endoplasmic reticulum r 99.5 2.7E-13 9.2E-18 124.1 11.5 110 15-148 47-163 (227)
123 1lu4_A Soluble secreted antige 99.5 2.3E-13 8E-18 112.3 9.7 109 115-322 23-135 (136)
124 2b5x_A YKUV protein, TRXY; thi 99.4 4.8E-13 1.6E-17 111.8 10.7 130 102-323 15-145 (148)
125 3raz_A Thioredoxin-related pro 99.4 2.1E-13 7E-18 115.9 8.3 114 115-323 23-140 (151)
126 3dml_A Putative uncharacterize 99.4 8.8E-14 3E-18 115.4 5.0 55 268-322 53-109 (116)
127 2f9s_A Thiol-disulfide oxidore 99.4 4.6E-13 1.6E-17 113.4 9.4 114 115-325 25-140 (151)
128 1ilo_A Conserved hypothetical 99.4 3.8E-13 1.3E-17 101.1 7.1 44 268-318 32-76 (77)
129 1zzo_A RV1677; thioredoxin fol 99.4 5.9E-13 2E-17 109.5 8.6 109 115-322 24-134 (136)
130 3hcz_A Possible thiol-disulfid 99.4 3.4E-13 1.2E-17 112.9 6.8 112 115-320 30-143 (148)
131 3eur_A Uncharacterized protein 99.4 1.2E-12 3.9E-17 110.0 9.6 48 115-162 30-81 (142)
132 3gl3_A Putative thiol:disulfid 99.4 5.3E-13 1.8E-17 112.7 7.4 116 115-327 27-146 (152)
133 2lja_A Putative thiol-disulfid 99.4 4.8E-13 1.6E-17 113.1 6.9 115 115-325 29-145 (152)
134 3ph9_A Anterior gradient prote 99.4 8.3E-13 2.8E-17 114.4 8.4 34 109-142 37-70 (151)
135 4evm_A Thioredoxin family prot 99.4 1.1E-12 3.8E-17 107.4 8.7 116 115-321 21-137 (138)
136 3erw_A Sporulation thiol-disul 99.4 1.1E-12 3.6E-17 109.3 8.1 111 115-319 33-145 (145)
137 3ewl_A Uncharacterized conserv 99.4 2.4E-12 8.3E-17 107.6 10.2 48 115-162 26-77 (142)
138 3ia1_A THIO-disulfide isomeras 99.4 1.7E-12 5.7E-17 110.1 9.2 113 117-325 31-146 (154)
139 3fkf_A Thiol-disulfide oxidore 99.3 7E-13 2.4E-17 111.0 6.0 61 95-160 17-79 (148)
140 3or5_A Thiol:disulfide interch 99.3 2.1E-12 7.1E-17 110.4 8.8 52 115-166 33-85 (165)
141 3kp8_A Vkorc1/thioredoxin doma 99.3 1.3E-13 4.3E-18 112.2 1.0 39 277-320 54-92 (106)
142 2lrn_A Thiol:disulfide interch 99.3 5.2E-12 1.8E-16 107.2 11.0 46 115-160 28-74 (152)
143 3ira_A Conserved protein; meth 99.3 1.1E-12 3.7E-17 116.2 6.2 45 104-148 27-74 (173)
144 2lrt_A Uncharacterized protein 99.3 5.5E-12 1.9E-16 107.7 10.2 51 115-165 34-85 (152)
145 1z6n_A Hypothetical protein PA 99.3 2.9E-12 1E-16 112.6 7.5 44 103-146 40-84 (167)
146 2l5o_A Putative thioredoxin; s 99.3 3.9E-12 1.3E-16 107.5 7.9 113 115-324 27-142 (153)
147 2hls_A Protein disulfide oxido 99.3 3.3E-12 1.1E-16 118.5 7.4 83 268-366 65-148 (243)
148 3eyt_A Uncharacterized protein 99.3 7.2E-12 2.5E-16 106.6 8.8 114 115-323 27-152 (158)
149 1kng_A Thiol:disulfide interch 99.3 1.9E-12 6.4E-17 109.6 5.0 109 115-321 41-150 (156)
150 3kcm_A Thioredoxin family prot 99.3 1.1E-11 3.8E-16 104.8 9.6 114 115-325 27-145 (154)
151 3lwa_A Secreted thiol-disulfid 99.3 1.1E-11 3.7E-16 108.6 9.7 52 115-166 58-117 (183)
152 2b1k_A Thiol:disulfide interch 99.3 2.5E-12 8.5E-17 110.9 5.4 109 114-321 49-158 (168)
153 3hdc_A Thioredoxin family prot 99.3 1.4E-11 5E-16 105.3 10.2 111 115-325 40-154 (158)
154 3ha9_A Uncharacterized thiored 99.3 3.3E-12 1.1E-16 109.8 6.0 42 115-157 36-77 (165)
155 3lor_A Thiol-disulfide isomera 99.3 1.8E-11 6.2E-16 104.1 10.0 43 115-157 29-73 (160)
156 3kh7_A Thiol:disulfide interch 99.3 8.1E-12 2.8E-16 109.5 7.5 109 115-322 57-166 (176)
157 3fw2_A Thiol-disulfide oxidore 99.2 1.5E-11 5.3E-16 104.1 8.3 64 93-161 15-82 (150)
158 4fo5_A Thioredoxin-like protei 99.2 6.9E-12 2.4E-16 105.3 5.6 47 115-161 31-78 (143)
159 2cvb_A Probable thiol-disulfid 99.2 4.1E-11 1.4E-15 105.4 9.1 44 115-158 32-75 (188)
160 1jfu_A Thiol:disulfide interch 99.2 4.8E-11 1.6E-15 104.6 9.5 45 115-159 59-104 (186)
161 1o8x_A Tryparedoxin, TRYX, TXN 99.2 7.7E-11 2.6E-15 99.2 10.3 47 115-161 27-75 (146)
162 2ywi_A Hypothetical conserved 99.2 4E-11 1.4E-15 105.8 7.8 44 115-158 44-89 (196)
163 3s9f_A Tryparedoxin; thioredox 99.2 1.4E-10 4.8E-15 100.6 10.5 47 115-161 47-95 (165)
164 1i5g_A Tryparedoxin II; electr 99.2 6.2E-11 2.1E-15 99.5 7.8 47 115-161 27-75 (144)
165 2ls5_A Uncharacterized protein 98.8 3.8E-12 1.3E-16 108.8 0.0 52 115-166 32-86 (159)
166 2ggt_A SCO1 protein homolog, m 99.1 9.3E-11 3.2E-15 100.1 8.6 45 115-159 22-72 (164)
167 1o73_A Tryparedoxin; electron 99.1 1E-10 3.5E-15 97.8 8.3 47 115-161 27-75 (144)
168 2p31_A CL683, glutathione pero 99.1 4.9E-11 1.7E-15 104.9 6.2 44 115-158 48-92 (181)
169 3dwv_A Glutathione peroxidase- 99.1 9.7E-11 3.3E-15 103.6 8.2 44 115-158 45-89 (187)
170 2lus_A Thioredoxion; CR-Trp16, 98.7 6.6E-12 2.3E-16 104.7 0.0 47 115-161 24-74 (143)
171 2rli_A SCO2 protein homolog, m 99.1 8.6E-11 3E-15 101.1 6.6 44 115-158 25-74 (171)
172 3cmi_A Peroxiredoxin HYR1; thi 99.1 2.3E-10 7.7E-15 99.3 9.1 42 115-157 31-73 (171)
173 2fgx_A Putative thioredoxin; N 99.1 8.8E-11 3E-15 95.9 5.8 48 268-318 59-106 (107)
174 2hyx_A Protein DIPZ; thioredox 99.1 7.3E-11 2.5E-15 115.5 6.0 115 115-321 81-197 (352)
175 2k6v_A Putative cytochrome C o 99.1 7.9E-11 2.7E-15 101.3 5.5 45 115-159 34-83 (172)
176 1hyu_A AHPF, alkyl hydroperoxi 99.1 2.4E-10 8.1E-15 117.1 9.7 134 50-321 63-198 (521)
177 3u5r_E Uncharacterized protein 99.1 3.9E-10 1.3E-14 102.4 9.4 44 115-158 57-102 (218)
178 1ttz_A Conserved hypothetical 99.1 9.7E-11 3.3E-15 92.0 4.6 49 270-323 29-77 (87)
179 2vup_A Glutathione peroxidase- 99.0 3.1E-10 1.1E-14 100.4 7.7 44 115-158 47-91 (190)
180 2v1m_A Glutathione peroxidase; 99.0 6.3E-10 2.1E-14 95.3 9.4 44 115-158 30-74 (169)
181 2p5q_A Glutathione peroxidase 99.0 2.8E-10 9.5E-15 97.7 7.0 44 115-158 31-75 (170)
182 4f9z_D Endoplasmic reticulum r 99.0 5.5E-10 1.9E-14 102.0 9.3 126 98-365 8-140 (227)
183 3q6o_A Sulfhydryl oxidase 1; p 99.0 3E-09 1E-13 97.7 14.1 107 15-128 53-169 (244)
184 3drn_A Peroxiredoxin, bacterio 99.0 2.3E-10 8E-15 98.3 5.8 44 115-158 27-73 (161)
185 2obi_A PHGPX, GPX-4, phospholi 99.0 3.8E-10 1.3E-14 99.1 6.9 44 115-158 46-90 (183)
186 3kp9_A Vkorc1/thioredoxin doma 99.0 5.9E-11 2E-15 113.2 1.2 40 277-321 239-278 (291)
187 2h8l_A Protein disulfide-isome 99.0 3.6E-09 1.2E-13 98.0 12.8 110 14-148 43-165 (252)
188 3t58_A Sulfhydryl oxidase 1; o 99.0 7.9E-09 2.7E-13 106.0 16.1 120 15-147 53-181 (519)
189 2gs3_A PHGPX, GPX-4, phospholi 99.0 5.7E-10 2E-14 98.3 6.6 44 115-158 48-92 (185)
190 2f8a_A Glutathione peroxidase 98.9 2E-09 6.9E-14 97.3 9.3 43 115-157 46-89 (208)
191 1xvw_A Hypothetical protein RV 98.9 5.2E-10 1.8E-14 95.4 4.3 44 115-158 34-80 (160)
192 1we0_A Alkyl hydroperoxide red 98.9 6.7E-10 2.3E-14 97.8 4.9 44 115-158 30-75 (187)
193 2dlx_A UBX domain-containing p 98.9 1.6E-09 5.5E-14 93.8 7.1 52 268-320 78-133 (153)
194 2jsy_A Probable thiol peroxida 98.9 6.3E-09 2.1E-13 89.5 10.8 43 115-158 43-86 (167)
195 2e7p_A Glutaredoxin; thioredox 98.9 3.7E-10 1.3E-14 91.5 2.6 42 279-322 63-107 (116)
196 1xzo_A BSSCO, hypothetical pro 98.9 1.9E-09 6.6E-14 92.8 7.0 44 115-158 32-79 (174)
197 3kij_A Probable glutathione pe 98.9 2E-09 6.9E-14 94.2 6.9 44 115-158 37-81 (180)
198 2b7k_A SCO1 protein; metalloch 98.9 3.5E-09 1.2E-13 94.6 7.6 44 115-158 40-88 (200)
199 1nm3_A Protein HI0572; hybrid, 98.9 9.2E-10 3.1E-14 101.1 3.8 165 115-318 32-240 (241)
200 2bmx_A Alkyl hydroperoxidase C 98.8 1E-09 3.5E-14 97.4 3.6 44 115-158 44-89 (195)
201 1zof_A Alkyl hydroperoxide-red 98.8 1.3E-09 4.4E-14 97.0 3.6 44 115-158 32-77 (198)
202 3ec3_A Protein disulfide-isome 98.8 2.9E-08 1E-12 91.9 12.5 109 15-148 45-168 (250)
203 1qmv_A Human thioredoxin perox 98.8 3.2E-09 1.1E-13 94.4 5.3 46 115-160 33-80 (197)
204 1xvq_A Thiol peroxidase; thior 98.8 1.6E-08 5.4E-13 88.2 9.4 43 115-159 43-86 (175)
205 1q98_A Thiol peroxidase, TPX; 98.7 2.4E-08 8.1E-13 86.2 8.7 43 115-158 42-85 (165)
206 1un2_A DSBA, thiol-disulfide i 98.7 1.2E-09 4.2E-14 98.2 0.5 113 41-160 41-160 (197)
207 2h8l_A Protein disulfide-isome 98.7 3.9E-08 1.3E-12 91.0 10.7 123 100-365 7-138 (252)
208 3gkn_A Bacterioferritin comigr 98.7 1E-08 3.6E-13 87.6 5.8 44 115-158 34-79 (163)
209 3ztl_A Thioredoxin peroxidase; 98.7 9.8E-09 3.3E-13 93.5 5.8 46 115-160 68-115 (222)
210 2k8s_A Thioredoxin; dimer, str 98.7 2E-09 6.8E-14 82.0 0.6 27 119-145 3-29 (80)
211 1zye_A Thioredoxin-dependent p 98.7 1.3E-08 4.4E-13 92.6 6.0 45 115-159 55-101 (220)
212 2h01_A 2-Cys peroxiredoxin; th 98.7 9.8E-09 3.4E-13 90.7 4.8 44 115-158 30-75 (192)
213 1uul_A Tryparedoxin peroxidase 98.7 7.5E-09 2.6E-13 92.5 4.1 45 115-159 35-81 (202)
214 1psq_A Probable thiol peroxida 98.7 1.4E-08 4.9E-13 87.3 5.5 44 115-159 41-85 (163)
215 4g2e_A Peroxiredoxin; redox pr 98.7 6E-09 2E-13 89.7 2.9 60 93-159 14-75 (157)
216 3me7_A Putative uncharacterize 98.7 3.3E-08 1.1E-12 86.0 7.2 44 115-158 27-74 (170)
217 3ec3_A Protein disulfide-isome 98.7 1.2E-07 4.2E-12 87.7 11.4 124 100-365 7-141 (250)
218 1wjk_A C330018D20RIK protein; 98.7 2.2E-08 7.6E-13 80.0 5.4 52 268-324 44-97 (100)
219 2yzh_A Probable thiol peroxida 98.7 2.4E-08 8.3E-13 86.4 6.1 44 115-159 46-90 (171)
220 3p7x_A Probable thiol peroxida 98.6 3.4E-08 1.2E-12 85.2 6.4 43 115-159 45-88 (166)
221 2i81_A 2-Cys peroxiredoxin; st 98.6 1.9E-08 6.5E-13 91.1 4.9 44 115-158 51-96 (213)
222 2i3y_A Epididymal secretory gl 98.6 8.6E-08 2.9E-12 87.3 9.2 43 115-158 55-98 (215)
223 3zrd_A Thiol peroxidase; oxido 98.6 1.3E-07 4.5E-12 84.7 9.5 44 115-159 77-121 (200)
224 2c0d_A Thioredoxin peroxidase 98.6 4.2E-08 1.4E-12 89.6 5.7 44 115-158 55-100 (221)
225 2a4v_A Peroxiredoxin DOT5; yea 98.6 3.4E-08 1.2E-12 84.4 4.5 43 116-158 35-78 (159)
226 1ego_A Glutaredoxin; electron 98.6 7.4E-08 2.5E-12 73.3 5.8 27 120-146 3-29 (85)
227 2r37_A Glutathione peroxidase 98.5 1.7E-07 5.8E-12 84.7 8.7 43 115-158 37-80 (207)
228 2pn8_A Peroxiredoxin-4; thiore 98.5 6.1E-08 2.1E-12 87.6 5.5 45 115-159 47-93 (211)
229 1n8j_A AHPC, alkyl hydroperoxi 98.5 6.5E-08 2.2E-12 85.4 5.4 44 115-158 29-74 (186)
230 1tp9_A Peroxiredoxin, PRX D (t 98.5 1.7E-07 5.9E-12 80.7 7.8 44 115-158 34-81 (162)
231 1eej_A Thiol:disulfide interch 98.5 8.5E-08 2.9E-12 86.9 4.7 42 275-320 167-208 (216)
232 3ixr_A Bacterioferritin comigr 98.5 9.8E-08 3.3E-12 83.7 4.7 45 115-159 50-96 (179)
233 3qpm_A Peroxiredoxin; oxidored 98.4 2.1E-07 7.3E-12 85.9 5.5 46 115-160 76-123 (240)
234 4gqc_A Thiol peroxidase, perox 98.4 7.4E-08 2.5E-12 83.6 1.4 49 111-159 28-78 (164)
235 1t3b_A Thiol:disulfide interch 98.4 3.7E-07 1.2E-11 82.5 5.8 43 275-321 167-209 (211)
236 3gyk_A 27KDA outer membrane pr 98.3 7.1E-07 2.4E-11 77.3 6.5 40 115-155 21-60 (175)
237 2c0g_A ERP29 homolog, windbeut 98.3 3.5E-07 1.2E-11 85.2 4.6 109 15-146 54-174 (248)
238 3uma_A Hypothetical peroxiredo 98.3 3.7E-07 1.3E-11 81.0 4.4 44 116-159 56-103 (184)
239 4hde_A SCO1/SENC family lipopr 98.3 1.7E-06 5.9E-11 75.2 8.5 59 95-160 18-80 (170)
240 2pwj_A Mitochondrial peroxired 98.3 3.8E-07 1.3E-11 79.6 3.8 49 111-159 39-90 (171)
241 3tjj_A Peroxiredoxin-4; thiore 98.3 4.4E-07 1.5E-11 84.6 4.2 46 115-160 90-137 (254)
242 2wfc_A Peroxiredoxin 5, PRDX5; 98.3 4.7E-07 1.6E-11 78.8 3.8 44 115-158 30-77 (167)
243 3hd5_A Thiol:disulfide interch 98.2 1.6E-06 5.6E-11 76.4 7.0 44 115-158 24-67 (195)
244 2l4c_A Endoplasmic reticulum r 98.2 4.5E-06 1.5E-10 69.5 8.7 46 99-148 21-67 (124)
245 3h93_A Thiol:disulfide interch 98.2 1.4E-06 4.6E-11 76.8 5.6 42 115-156 24-65 (192)
246 3h79_A Thioredoxin-like protei 98.1 2.6E-06 9E-11 69.7 5.3 62 16-79 57-125 (127)
247 3mng_A Peroxiredoxin-5, mitoch 98.1 3E-06 1E-10 74.3 6.0 44 115-158 42-89 (173)
248 1h75_A Glutaredoxin-like prote 98.1 2.1E-06 7.1E-11 64.7 4.2 21 120-140 3-23 (81)
249 3a2v_A Probable peroxiredoxin; 98.1 2.8E-06 9.4E-11 79.1 5.8 51 110-160 27-79 (249)
250 1prx_A HORF6; peroxiredoxin, h 98.1 2.9E-06 9.9E-11 77.4 5.7 42 118-159 34-76 (224)
251 1v58_A Thiol:disulfide interch 98.1 3.2E-06 1.1E-10 77.9 5.7 47 276-323 186-233 (241)
252 1kte_A Thioltransferase; redox 98.0 1.1E-06 3.8E-11 69.7 1.7 34 107-142 3-36 (105)
253 2djk_A PDI, protein disulfide- 98.0 4.6E-06 1.6E-10 69.4 5.4 78 16-97 46-130 (133)
254 1r7h_A NRDH-redoxin; thioredox 98.0 5.1E-06 1.8E-10 61.2 5.1 22 120-141 3-24 (75)
255 2qgv_A Hydrogenase-1 operon pr 98.0 2.4E-06 8.3E-11 72.7 3.3 73 8-82 48-125 (140)
256 2v2g_A Peroxiredoxin 6; oxidor 98.0 2.6E-06 9E-11 78.4 3.4 44 116-159 29-74 (233)
257 3uvt_A Thioredoxin domain-cont 97.9 9.9E-06 3.4E-10 63.7 5.6 63 16-80 45-110 (111)
258 2qsi_A Putative hydrogenase ex 97.9 8.2E-06 2.8E-10 69.2 5.2 67 13-81 52-122 (137)
259 2voc_A Thioredoxin; electron t 97.9 2.5E-05 8.6E-10 62.2 7.3 64 16-83 41-106 (112)
260 1xcc_A 1-Cys peroxiredoxin; un 97.9 4.3E-06 1.5E-10 76.1 2.9 42 118-159 34-76 (220)
261 4dvc_A Thiol:disulfide interch 97.9 1.2E-05 4E-10 69.5 5.5 41 115-155 20-60 (184)
262 3zzx_A Thioredoxin; oxidoreduc 97.9 1.5E-05 5.3E-10 63.8 5.6 53 25-80 50-104 (105)
263 3gnj_A Thioredoxin domain prot 97.9 1.4E-05 4.6E-10 63.0 4.8 62 15-80 45-108 (111)
264 2znm_A Thiol:disulfide interch 97.8 5.4E-06 1.8E-10 72.9 2.6 42 116-157 22-63 (195)
265 3keb_A Probable thiol peroxida 97.8 2.3E-05 7.8E-10 71.8 6.6 40 115-158 47-92 (224)
266 1oaz_A Thioredoxin 1; immune s 97.8 2.6E-05 9.1E-10 63.8 6.2 70 10-81 49-122 (123)
267 3hz4_A Thioredoxin; NYSGXRC, P 97.8 1.1E-05 3.8E-10 67.3 4.0 68 15-86 47-116 (140)
268 2wz9_A Glutaredoxin-3; protein 97.8 2.2E-05 7.6E-10 66.5 5.8 80 25-116 62-143 (153)
269 2i4a_A Thioredoxin; acidophIle 97.8 3.7E-05 1.3E-09 59.9 6.6 62 15-80 43-106 (107)
270 3die_A Thioredoxin, TRX; elect 97.8 3.5E-05 1.2E-09 59.9 6.4 62 15-80 42-105 (106)
271 4euy_A Uncharacterized protein 97.8 4.5E-05 1.5E-09 59.9 7.0 55 25-81 48-104 (105)
272 2ht9_A Glutaredoxin-2; thiored 97.8 6.8E-06 2.3E-10 70.2 2.2 33 107-141 40-72 (146)
273 2qc7_A ERP31, ERP28, endoplasm 97.8 2.9E-05 9.9E-10 71.8 6.5 67 15-81 43-118 (240)
274 2hze_A Glutaredoxin-1; thiored 97.8 4.1E-06 1.4E-10 68.0 0.6 32 108-141 11-42 (114)
275 2trx_A Thioredoxin; electron t 97.8 3.5E-05 1.2E-09 60.4 6.0 61 16-80 44-106 (108)
276 2cq9_A GLRX2 protein, glutared 97.8 2.1E-05 7E-10 65.5 4.8 34 106-141 17-50 (130)
277 2i1u_A Thioredoxin, TRX, MPT46 97.8 4.1E-05 1.4E-09 61.3 6.3 63 16-82 54-118 (121)
278 2dj1_A Protein disulfide-isome 97.8 4E-05 1.4E-09 63.2 6.4 66 16-84 58-126 (140)
279 3ul3_B Thioredoxin, thioredoxi 97.8 4.5E-05 1.5E-09 62.4 6.6 61 15-79 65-127 (128)
280 3tco_A Thioredoxin (TRXA-1); d 97.7 4E-05 1.4E-09 59.8 5.6 61 16-80 45-107 (109)
281 2yzu_A Thioredoxin; redox prot 97.7 5.6E-05 1.9E-09 58.8 6.5 64 15-82 41-106 (109)
282 2ppt_A Thioredoxin-2; thiredox 97.7 3.5E-05 1.2E-09 65.8 5.6 64 15-82 87-152 (155)
283 1mek_A Protein disulfide isome 97.7 4E-05 1.4E-09 60.8 5.5 65 17-83 49-118 (120)
284 1nsw_A Thioredoxin, TRX; therm 97.7 5.6E-05 1.9E-09 58.9 6.2 62 16-81 41-104 (105)
285 1x5e_A Thioredoxin domain cont 97.7 4.9E-05 1.7E-09 61.6 5.9 64 16-83 46-111 (126)
286 1thx_A Thioredoxin, thioredoxi 97.7 4E-05 1.4E-09 60.5 5.3 63 16-82 49-113 (115)
287 2o8v_B Thioredoxin 1; disulfid 97.7 6E-05 2E-09 62.0 6.3 61 16-80 64-126 (128)
288 2es7_A Q8ZP25_salty, putative 97.6 1.5E-05 5E-10 67.6 2.1 74 8-83 48-126 (142)
289 1x5d_A Protein disulfide-isome 97.6 8.2E-05 2.8E-09 60.5 6.1 66 16-83 49-118 (133)
290 3ga4_A Dolichyl-diphosphooligo 97.6 2.3E-05 7.7E-10 69.3 2.9 67 15-83 67-154 (178)
291 3p2a_A Thioredoxin 2, putative 97.6 9.4E-05 3.2E-09 61.9 6.5 64 15-82 78-143 (148)
292 3apq_A DNAJ homolog subfamily 97.6 3E-05 1E-09 69.3 3.4 65 15-83 137-203 (210)
293 1z6m_A Conserved hypothetical 97.6 0.00012 4.2E-09 63.0 7.2 42 116-157 27-70 (175)
294 1t00_A Thioredoxin, TRX; redox 97.6 7.1E-05 2.4E-09 59.1 5.2 61 16-80 47-109 (112)
295 1w4v_A Thioredoxin, mitochondr 97.6 7.3E-05 2.5E-09 60.2 5.3 61 16-80 55-117 (119)
296 1v98_A Thioredoxin; oxidoreduc 97.6 8.8E-05 3E-09 61.4 5.9 64 15-82 73-138 (140)
297 2dml_A Protein disulfide-isome 97.6 5.2E-05 1.8E-09 61.7 4.3 63 16-82 59-124 (130)
298 2e0q_A Thioredoxin; electron t 97.6 8.4E-05 2.9E-09 57.2 5.2 61 16-81 40-102 (104)
299 3c1r_A Glutaredoxin-1; oxidize 97.5 3.8E-05 1.3E-09 62.8 3.1 33 107-141 16-49 (118)
300 2rem_A Disulfide oxidoreductas 97.5 4.7E-05 1.6E-09 66.6 3.7 42 116-157 25-66 (193)
301 1xwb_A Thioredoxin; dimerizati 97.5 0.00014 4.9E-09 56.4 6.2 60 16-80 44-105 (106)
302 1dby_A Chloroplast thioredoxin 97.5 9.1E-05 3.1E-09 57.8 4.9 61 16-80 43-105 (107)
303 2yan_A Glutaredoxin-3; oxidore 97.5 0.0001 3.5E-09 58.7 5.0 33 107-141 8-45 (105)
304 1fb6_A Thioredoxin M; electron 97.5 0.00012 4E-09 56.8 5.2 60 16-79 42-103 (105)
305 3hxs_A Thioredoxin, TRXP; elec 97.5 0.00014 4.8E-09 60.0 5.5 64 15-82 74-139 (141)
306 3qfa_C Thioredoxin; protein-pr 97.4 0.00012 4.1E-09 58.8 4.6 51 26-79 62-114 (116)
307 3gv1_A Disulfide interchange p 97.4 9.2E-05 3.1E-09 63.2 3.9 44 275-322 95-138 (147)
308 2klx_A Glutaredoxin; thioredox 97.4 0.00011 3.8E-09 56.3 3.8 23 119-141 7-29 (89)
309 3dxb_A Thioredoxin N-terminall 97.4 0.00043 1.5E-08 62.2 8.3 65 15-83 53-119 (222)
310 3ic4_A Glutaredoxin (GRX-1); s 97.4 0.00019 6.5E-09 55.2 5.0 35 279-319 57-91 (92)
311 3m9j_A Thioredoxin; oxidoreduc 97.4 0.00022 7.5E-09 55.3 5.3 58 16-79 44-103 (105)
312 1ep7_A Thioredoxin CH1, H-type 97.4 0.00016 5.6E-09 56.8 4.6 60 16-80 48-109 (112)
313 2dj3_A Protein disulfide-isome 97.3 0.00025 8.5E-09 57.7 5.7 67 15-83 48-119 (133)
314 4f82_A Thioredoxin reductase; 97.3 0.00016 5.5E-09 63.7 4.7 52 108-159 40-94 (176)
315 1fov_A Glutaredoxin 3, GRX3; a 97.3 0.00033 1.1E-08 52.2 5.8 22 120-141 3-24 (82)
316 2l5l_A Thioredoxin; structural 97.3 0.0002 6.8E-09 59.1 4.8 63 16-83 62-127 (136)
317 3hz8_A Thiol:disulfide interch 97.3 0.00016 5.4E-09 64.0 4.2 46 115-160 23-68 (193)
318 3rhb_A ATGRXC5, glutaredoxin-C 97.3 0.00019 6.4E-09 57.7 4.3 32 108-141 11-42 (113)
319 2av4_A Thioredoxin-like protei 97.3 0.00053 1.8E-08 59.4 7.2 65 15-83 64-140 (160)
320 2vlu_A Thioredoxin, thioredoxi 97.3 0.00026 8.9E-09 56.7 5.0 61 16-82 58-120 (122)
321 3l9s_A Thiol:disulfide interch 97.3 0.00019 6.5E-09 63.6 4.4 42 116-157 21-65 (191)
322 2l57_A Uncharacterized protein 97.2 0.00037 1.3E-08 56.3 5.4 65 15-83 49-118 (126)
323 3aps_A DNAJ homolog subfamily 97.2 0.00017 5.9E-09 57.8 3.3 64 15-82 44-113 (122)
324 1gh2_A Thioredoxin-like protei 97.2 0.00034 1.2E-08 54.8 4.9 59 16-80 45-105 (107)
325 1r26_A Thioredoxin; redox-acti 97.2 0.00041 1.4E-08 56.8 5.5 60 16-81 61-122 (125)
326 1syr_A Thioredoxin; SGPP, stru 97.2 0.00052 1.8E-08 54.3 6.0 53 26-81 57-111 (112)
327 2vim_A Thioredoxin, TRX; thior 97.2 0.00046 1.6E-08 53.2 5.5 51 26-79 50-102 (104)
328 2oe3_A Thioredoxin-3; electron 97.2 0.00053 1.8E-08 54.9 6.1 58 16-79 54-113 (114)
329 2djj_A PDI, protein disulfide- 97.2 0.00045 1.5E-08 55.1 5.4 64 15-83 48-118 (121)
330 2xc2_A Thioredoxinn; oxidoredu 97.2 0.00039 1.3E-08 55.4 4.9 59 18-79 55-115 (117)
331 3qou_A Protein YBBN; thioredox 97.1 0.00056 1.9E-08 63.4 6.3 63 16-82 50-114 (287)
332 3f3q_A Thioredoxin-1; His TAG, 97.1 0.00051 1.7E-08 54.3 5.2 58 16-79 48-107 (109)
333 2yj7_A LPBCA thioredoxin; oxid 96.2 7.2E-05 2.5E-09 57.8 0.0 60 16-79 43-104 (106)
334 2l6c_A Thioredoxin; oxidoreduc 97.1 0.00078 2.7E-08 53.3 6.2 69 13-83 36-107 (110)
335 3bj5_A Protein disulfide-isome 97.1 0.00061 2.1E-08 57.9 5.8 81 15-97 55-142 (147)
336 3nzn_A Glutaredoxin; structura 97.1 0.00085 2.9E-08 53.0 5.9 26 116-141 20-45 (103)
337 3gix_A Thioredoxin-like protei 97.0 0.00066 2.2E-08 57.4 5.4 63 16-82 47-121 (149)
338 3qmx_A Glutaredoxin A, glutare 97.0 0.00062 2.1E-08 53.9 4.6 26 116-141 14-39 (99)
339 3d6i_A Monothiol glutaredoxin- 97.0 0.00098 3.4E-08 52.4 5.8 62 16-81 45-108 (112)
340 2ec4_A FAS-associated factor 1 97.0 0.0024 8.3E-08 56.1 8.7 38 283-320 124-165 (178)
341 2j23_A Thioredoxin; immune pro 97.0 0.00037 1.3E-08 56.2 3.1 51 27-80 67-119 (121)
342 1xfl_A Thioredoxin H1; AT3G510 97.0 0.001 3.5E-08 54.1 5.7 52 26-80 69-122 (124)
343 3l9v_A Putative thiol-disulfid 97.0 0.00022 7.4E-09 62.9 1.7 43 116-158 14-59 (189)
344 1wik_A Thioredoxin-like protei 97.0 0.00051 1.7E-08 55.0 3.8 33 107-141 6-43 (109)
345 2khp_A Glutaredoxin; thioredox 96.9 0.00061 2.1E-08 52.2 3.9 23 119-141 7-29 (92)
346 1fo5_A Thioredoxin; disulfide 96.9 0.0015 5E-08 48.5 5.8 66 8-79 14-83 (85)
347 1qgv_A Spliceosomal protein U5 96.8 0.0024 8.1E-08 53.4 6.9 63 16-82 47-121 (142)
348 3feu_A Putative lipoprotein; a 96.8 0.00066 2.3E-08 59.6 3.5 40 116-157 22-61 (185)
349 2vm1_A Thioredoxin, thioredoxi 96.8 0.0013 4.4E-08 51.9 5.0 54 26-82 59-114 (118)
350 4eo3_A Bacterioferritin comigr 96.8 0.00076 2.6E-08 64.8 4.0 58 91-158 6-64 (322)
351 3msz_A Glutaredoxin 1; alpha-b 96.8 0.0014 4.7E-08 49.5 4.7 23 119-141 5-27 (89)
352 1nho_A Probable thioredoxin; b 96.8 0.0017 5.9E-08 48.1 5.1 65 10-80 15-83 (85)
353 3bj5_A Protein disulfide-isome 96.8 0.0054 1.9E-07 51.9 8.8 49 100-148 15-64 (147)
354 3h8q_A Thioredoxin reductase 3 96.8 0.0012 4E-08 53.4 4.4 33 107-141 8-40 (114)
355 3d22_A TRXH4, thioredoxin H-ty 96.7 0.0018 6E-08 53.2 5.4 61 16-82 70-132 (139)
356 2dj0_A Thioredoxin-related tra 96.7 0.00039 1.3E-08 57.3 1.3 62 16-80 50-119 (137)
357 2kuc_A Putative disulphide-iso 96.7 0.00085 2.9E-08 54.3 3.3 66 16-83 54-122 (130)
358 1ti3_A Thioredoxin H, PTTRXH1; 96.7 0.0014 4.7E-08 51.3 4.5 52 26-80 57-110 (113)
359 3emx_A Thioredoxin; structural 96.7 0.0012 4.2E-08 54.3 4.3 66 16-83 51-127 (135)
360 3sbc_A Peroxiredoxin TSA1; alp 96.7 0.006 2.1E-07 55.3 8.9 46 115-160 51-98 (216)
361 2pu9_C TRX-F, thioredoxin F-ty 96.6 0.0015 5.1E-08 51.3 4.2 59 16-79 48-108 (111)
362 1zma_A Bacterocin transport ac 96.6 0.0013 4.5E-08 52.4 3.7 62 16-79 53-118 (118)
363 1faa_A Thioredoxin F; electron 96.6 0.0027 9.2E-08 50.9 5.4 53 26-80 68-122 (124)
364 3ctg_A Glutaredoxin-2; reduced 96.6 0.00077 2.6E-08 56.0 2.1 34 106-141 27-61 (129)
365 2f51_A Thioredoxin; electron t 96.5 0.0021 7.2E-08 51.6 4.2 62 16-83 47-114 (118)
366 2lqo_A Putative glutaredoxin R 96.4 0.0028 9.4E-08 49.7 4.4 32 286-322 52-83 (92)
367 3cxg_A Putative thioredoxin; m 96.4 0.0029 1E-07 52.0 4.8 65 15-82 59-129 (133)
368 2lst_A Thioredoxin; structural 95.4 0.00051 1.8E-08 55.7 0.0 66 16-83 46-117 (130)
369 3qcp_A QSOX from trypanosoma b 96.3 0.00065 2.2E-08 68.6 0.2 65 15-82 65-139 (470)
370 3fk8_A Disulphide isomerase; A 96.3 0.0029 9.9E-08 51.4 4.1 60 16-79 55-130 (133)
371 2trc_P Phosducin, MEKA, PP33; 96.2 0.0051 1.7E-07 55.5 5.4 54 25-81 150-212 (217)
372 1wmj_A Thioredoxin H-type; str 96.1 0.0012 4.2E-08 53.1 0.8 73 8-83 48-123 (130)
373 2fwh_A Thiol:disulfide interch 96.1 0.0044 1.5E-07 50.7 4.0 64 15-81 57-127 (134)
374 3evi_A Phosducin-like protein 96.0 0.014 4.9E-07 47.4 6.9 57 16-80 47-112 (118)
375 3dml_A Putative uncharacterize 95.9 0.009 3.1E-07 48.8 5.3 55 27-81 53-109 (116)
376 1wou_A Thioredoxin -related pr 95.9 0.0076 2.6E-07 48.6 4.6 58 17-79 56-122 (123)
377 3gha_A Disulfide bond formatio 95.8 0.022 7.4E-07 50.6 7.6 41 116-156 29-72 (202)
378 2dbc_A PDCL2, unnamed protein 95.3 0.027 9.1E-07 46.3 5.8 58 16-81 54-120 (135)
379 2fgx_A Putative thioredoxin; N 95.1 0.0035 1.2E-07 50.5 -0.0 65 9-77 41-106 (107)
380 1ilo_A Conserved hypothetical 94.9 0.031 1.1E-06 40.4 4.7 50 17-77 24-76 (77)
381 3kp8_A Vkorc1/thioredoxin doma 94.6 0.035 1.2E-06 44.0 4.6 46 31-81 43-94 (106)
382 1a0r_P Phosducin, MEKA, PP33; 94.5 0.053 1.8E-06 49.9 6.2 61 16-82 157-226 (245)
383 3tue_A Tryparedoxin peroxidase 94.3 0.04 1.4E-06 50.0 4.8 47 115-161 55-103 (219)
384 3l9v_A Putative thiol-disulfid 94.2 0.0092 3.1E-07 52.3 0.4 25 282-308 138-162 (189)
385 1xiy_A Peroxiredoxin, pfaop; a 94.2 0.083 2.9E-06 46.3 6.5 46 115-160 42-92 (182)
386 1nm3_A Protein HI0572; hybrid, 94.1 0.14 4.9E-06 45.9 8.2 37 119-161 171-207 (241)
387 2ju5_A Thioredoxin disulfide i 94.1 0.05 1.7E-06 45.6 4.7 64 15-81 74-151 (154)
388 1lu4_A Soluble secreted antige 93.9 0.088 3E-06 41.8 5.7 54 26-80 55-134 (136)
389 3erw_A Sporulation thiol-disul 93.8 0.13 4.4E-06 41.3 6.6 62 16-78 58-145 (145)
390 3hz8_A Thiol:disulfide interch 93.5 0.016 5.6E-07 50.8 0.6 33 283-320 148-180 (193)
391 3c7m_A Thiol:disulfide interch 93.5 0.063 2.1E-06 46.2 4.3 42 116-157 17-59 (195)
392 3iv4_A Putative oxidoreductase 93.4 0.034 1.2E-06 45.2 2.3 51 25-77 53-111 (112)
393 2b5x_A YKUV protein, TRXY; thi 93.4 0.099 3.4E-06 42.1 5.3 65 16-82 53-145 (148)
394 1zzo_A RV1677; thioredoxin fol 93.3 0.11 3.8E-06 41.0 5.3 55 26-81 56-134 (136)
395 3f9u_A Putative exported cytoc 93.2 0.044 1.5E-06 46.4 2.9 64 15-82 73-166 (172)
396 2wci_A Glutaredoxin-4; redox-a 93.2 0.061 2.1E-06 44.9 3.6 34 107-141 26-63 (135)
397 2h30_A Thioredoxin, peptide me 93.1 0.082 2.8E-06 43.8 4.3 56 26-83 99-157 (164)
398 1un2_A DSBA, thiol-disulfide i 92.6 0.017 5.8E-07 51.2 -0.8 37 239-278 117-159 (197)
399 2f9s_A Thiol-disulfide oxidore 92.0 0.23 7.8E-06 40.5 5.7 67 16-83 50-139 (151)
400 1ttz_A Conserved hypothetical 91.8 0.17 5.9E-06 38.7 4.3 63 12-83 15-78 (87)
401 3ia1_A THIO-disulfide isomeras 91.7 0.23 7.8E-06 40.6 5.3 46 39-84 98-146 (154)
402 2l4c_A Endoplasmic reticulum r 90.9 0.26 9E-06 40.3 4.8 56 16-79 60-121 (124)
403 3ipz_A Monothiol glutaredoxin- 90.9 0.2 6.9E-06 39.7 4.0 32 108-141 10-46 (109)
404 3gx8_A Monothiol glutaredoxin- 90.7 0.32 1.1E-05 39.5 5.1 32 108-141 8-44 (121)
405 3raz_A Thioredoxin-related pro 90.5 0.4 1.4E-05 39.1 5.7 67 16-83 48-141 (151)
406 3zyw_A Glutaredoxin-3; metal b 90.3 0.32 1.1E-05 38.8 4.7 32 108-141 8-44 (111)
407 4evm_A Thioredoxin family prot 90.1 0.58 2E-05 36.5 6.2 39 41-79 95-136 (138)
408 2in3_A Hypothetical protein; D 89.9 0.19 6.6E-06 44.0 3.4 45 277-321 164-208 (216)
409 3l4n_A Monothiol glutaredoxin- 89.9 0.21 7.3E-06 41.1 3.4 33 107-141 5-37 (127)
410 3hcz_A Possible thiol-disulfid 89.7 0.41 1.4E-05 38.4 5.0 61 16-79 55-143 (148)
411 1aba_A Glutaredoxin; electron 89.4 0.45 1.5E-05 35.6 4.7 21 120-140 2-26 (87)
412 3kp9_A Vkorc1/thioredoxin doma 89.3 0.36 1.2E-05 45.4 4.9 47 31-82 228-280 (291)
413 3fkf_A Thiol-disulfide oxidore 88.7 0.63 2.2E-05 37.2 5.5 64 15-81 56-145 (148)
414 2axo_A Hypothetical protein AT 88.2 0.27 9.3E-06 45.8 3.2 29 117-145 43-71 (270)
415 2lja_A Putative thiol-disulfid 87.9 0.58 2E-05 37.9 4.8 66 17-83 55-144 (152)
416 2ct6_A SH3 domain-binding glut 87.9 0.76 2.6E-05 36.4 5.3 13 120-132 10-22 (111)
417 1t1v_A SH3BGRL3, SH3 domain-bi 87.7 0.64 2.2E-05 35.3 4.6 20 120-139 4-29 (93)
418 3or5_A Thiol:disulfide interch 87.1 0.81 2.8E-05 37.5 5.3 66 15-83 57-152 (165)
419 1sen_A Thioredoxin-like protei 86.9 0.17 6E-06 42.8 1.0 55 26-82 78-148 (164)
420 2l5o_A Putative thioredoxin; s 86.9 0.93 3.2E-05 36.7 5.5 45 39-83 95-142 (153)
421 2lus_A Thioredoxion; CR-Trp16, 85.2 0.18 6E-06 40.6 0.0 69 237-305 28-125 (143)
422 3kzq_A Putative uncharacterize 84.9 0.55 1.9E-05 41.1 3.3 43 279-321 159-201 (208)
423 2wem_A Glutaredoxin-related pr 84.9 0.88 3E-05 36.7 4.2 33 107-141 11-48 (118)
424 2ls5_A Uncharacterized protein 85.1 0.18 6.2E-06 41.6 0.0 84 238-322 36-147 (159)
425 3f4s_A Alpha-DSBA1, putative u 84.0 1.1 3.6E-05 40.3 4.8 42 116-157 39-83 (226)
426 3lor_A Thiol-disulfide isomera 84.0 1.8 6.3E-05 35.1 6.0 41 42-82 112-155 (160)
427 3gn3_A Putative protein-disulf 83.9 1 3.4E-05 39.0 4.4 37 280-318 145-181 (182)
428 3feu_A Putative lipoprotein; a 83.8 0.5 1.7E-05 40.9 2.5 42 277-320 140-181 (185)
429 1jfu_A Thiol:disulfide interch 83.6 0.065 2.2E-06 45.7 -3.4 85 237-323 62-180 (186)
430 2xhf_A Peroxiredoxin 5; oxidor 83.4 1.2 4.2E-05 38.3 4.7 47 115-161 41-90 (171)
431 2dlx_A UBX domain-containing p 81.7 0.96 3.3E-05 38.3 3.3 63 16-81 69-135 (153)
432 2b1k_A Thiol:disulfide interch 80.9 1.2 4E-05 36.9 3.6 43 39-81 114-159 (168)
433 3hdc_A Thioredoxin family prot 80.6 3.5 0.00012 33.6 6.5 65 16-81 65-151 (158)
434 3gl3_A Putative thiol:disulfid 80.6 2.5 8.5E-05 34.0 5.4 68 15-83 51-143 (152)
435 3bci_A Disulfide bond protein 80.4 1.9 6.4E-05 36.7 4.9 41 278-323 138-178 (186)
436 3eyt_A Uncharacterized protein 80.2 3.1 0.00011 33.6 6.0 42 41-82 108-152 (158)
437 1kng_A Thiol:disulfide interch 80.2 0.58 2E-05 38.0 1.4 41 40-80 107-150 (156)
438 3bci_A Disulfide bond protein 79.3 1 3.6E-05 38.3 2.8 41 116-156 11-54 (186)
439 2lrn_A Thiol:disulfide interch 78.9 3.9 0.00013 33.0 6.2 61 16-80 53-139 (152)
440 3gn3_A Putative protein-disulf 78.2 1 3.6E-05 38.9 2.5 41 115-155 13-54 (182)
441 3kcm_A Thioredoxin family prot 77.3 3.8 0.00013 32.9 5.6 68 15-83 51-144 (154)
442 3gmf_A Protein-disulfide isome 76.2 5.3 0.00018 35.1 6.6 41 116-156 15-58 (205)
443 3c7m_A Thiol:disulfide interch 75.6 1.4 4.6E-05 37.5 2.5 42 277-320 150-191 (195)
444 2ywi_A Hypothetical conserved 75.4 3 0.0001 35.3 4.6 43 40-82 120-174 (196)
445 1wjk_A C330018D20RIK protein; 74.9 1.7 5.8E-05 33.5 2.6 62 14-82 33-96 (100)
446 3tdg_A DSBG, putative uncharac 74.7 1.8 6.2E-05 40.3 3.2 29 116-144 147-175 (273)
447 3ha9_A Uncharacterized thiored 73.5 4.5 0.00016 33.0 5.2 40 41-81 121-163 (165)
448 3fw2_A Thiol-disulfide oxidore 72.3 6.2 0.00021 31.7 5.7 61 16-79 59-145 (150)
449 1hyu_A AHPF, alkyl hydroperoxi 71.4 3.2 0.00011 41.6 4.4 69 8-82 129-200 (521)
450 3l4n_A Monothiol glutaredoxin- 70.7 0.56 1.9E-05 38.5 -1.2 56 242-302 19-81 (127)
451 2lrt_A Uncharacterized protein 70.6 5.7 0.0002 32.3 5.1 63 16-79 59-145 (152)
452 2hyx_A Protein DIPZ; thioredox 70.2 5.9 0.0002 38.0 5.8 66 16-82 106-199 (352)
453 2cvb_A Probable thiol-disulfid 69.2 5.9 0.0002 33.3 5.0 44 40-83 106-160 (188)
454 3ira_A Conserved protein; meth 68.8 2.3 7.8E-05 36.7 2.3 41 16-60 66-117 (173)
455 3ph9_A Anterior gradient prote 68.7 4.1 0.00014 34.1 3.8 53 28-81 79-144 (151)
456 2jad_A Yellow fluorescent prot 67.7 1.4 4.8E-05 42.7 0.8 22 280-303 309-330 (362)
457 3ewl_A Uncharacterized conserv 67.7 10 0.00036 29.8 6.0 62 17-81 55-140 (142)
458 1o8x_A Tryparedoxin, TRYX, TXN 66.4 5.4 0.00019 31.9 4.1 46 15-60 51-122 (146)
459 2p31_A CL683, glutathione pero 64.0 0.35 1.2E-05 41.2 -3.9 84 237-322 51-180 (181)
460 2e7p_A Glutaredoxin; thioredox 63.8 1.8 6.3E-05 33.4 0.6 63 14-80 36-106 (116)
461 2jsy_A Probable thiol peroxida 63.6 0.43 1.5E-05 39.7 -3.4 82 238-320 47-164 (167)
462 1o73_A Tryparedoxin; electron 63.4 3.8 0.00013 32.5 2.5 41 16-56 52-116 (144)
463 3lwa_A Secreted thiol-disulfid 62.6 6.3 0.00021 32.9 3.9 34 47-80 143-179 (183)
464 4fo5_A Thioredoxin-like protei 62.4 0.54 1.8E-05 38.0 -2.9 79 237-320 34-142 (143)
465 2x8g_A Thioredoxin glutathione 62.3 6.6 0.00022 39.9 4.6 33 107-141 9-41 (598)
466 3kh7_A Thiol:disulfide interch 62.1 4 0.00014 34.2 2.6 43 40-82 122-167 (176)
467 3dwv_A Glutathione peroxidase- 61.8 1.2 4E-05 38.1 -1.0 86 236-323 47-183 (187)
468 2gs3_A PHGPX, GPX-4, phospholi 60.7 0.59 2E-05 39.9 -3.1 31 290-320 152-183 (185)
469 3gmf_A Protein-disulfide isome 60.3 4.4 0.00015 35.6 2.5 40 278-322 156-196 (205)
470 1xvw_A Hypothetical protein RV 59.4 0.8 2.7E-05 37.6 -2.4 81 238-320 39-157 (160)
471 2obi_A PHGPX, GPX-4, phospholi 59.2 0.61 2.1E-05 39.6 -3.3 82 238-321 50-182 (183)
472 1i5g_A Tryparedoxin II; electr 58.5 8.5 0.00029 30.5 3.8 46 15-60 51-122 (144)
473 2vup_A Glutathione peroxidase- 58.2 0.56 1.9E-05 40.3 -3.7 85 236-322 49-184 (190)
474 3ktb_A Arsenical resistance op 57.9 13 0.00046 29.4 4.7 50 267-319 43-102 (106)
475 2ggt_A SCO1 protein homolog, m 56.1 18 0.00063 29.0 5.6 41 41-81 102-160 (164)
476 1z3e_A Regulatory protein SPX; 55.7 9.6 0.00033 30.9 3.7 36 120-161 3-38 (132)
477 1r4w_A Glutathione S-transfera 55.2 11 0.00039 33.0 4.4 45 278-323 171-215 (226)
478 3s9f_A Tryparedoxin; thioredox 54.5 9.8 0.00034 31.5 3.7 44 15-58 71-138 (165)
479 3kgk_A Arsenical resistance op 53.9 24 0.00081 28.2 5.5 53 267-322 40-102 (110)
480 3f4s_A Alpha-DSBA1, putative u 53.4 5.9 0.0002 35.3 2.2 45 278-322 159-210 (226)
481 2imf_A HCCA isomerase, 2-hydro 52.3 5.3 0.00018 34.4 1.7 38 278-320 156-193 (203)
482 2k6v_A Putative cytochrome C o 51.2 5.8 0.0002 32.4 1.7 30 50-79 139-170 (172)
483 1z6n_A Hypothetical protein PA 49.5 12 0.0004 31.7 3.4 42 25-69 84-131 (167)
484 3fz5_A Possible 2-hydroxychrom 49.1 6.7 0.00023 34.0 1.8 37 279-320 163-199 (202)
485 2rli_A SCO2 protein homolog, m 48.5 27 0.00094 28.2 5.5 41 41-81 105-163 (171)
486 2g2q_A Glutaredoxin-2; thiored 47.6 4.8 0.00016 32.6 0.5 29 117-145 2-30 (124)
487 2yzh_A Probable thiol peroxida 47.5 2.3 7.9E-05 35.5 -1.5 78 242-321 55-170 (171)
488 3gl5_A Putative DSBA oxidoredu 47.3 10 0.00035 33.9 2.8 40 280-323 174-213 (239)
489 1rw1_A Conserved hypothetical 47.0 9.7 0.00033 30.0 2.3 34 120-159 2-35 (114)
490 2k8s_A Thioredoxin; dimer, str 46.0 19 0.00066 25.6 3.7 47 11-59 15-64 (80)
491 2in3_A Hypothetical protein; D 45.3 18 0.00063 30.9 4.1 40 41-80 167-208 (216)
492 2kok_A Arsenate reductase; bru 44.2 11 0.00039 29.9 2.3 34 120-159 7-40 (120)
493 2p5q_A Glutathione peroxidase 43.9 1.9 6.4E-05 35.5 -2.6 84 238-323 35-168 (170)
494 3p7x_A Probable thiol peroxida 43.4 2.4 8.1E-05 35.3 -2.0 77 242-320 54-165 (166)
495 1psq_A Probable thiol peroxida 42.3 2.7 9.3E-05 34.7 -1.8 77 243-320 51-162 (163)
496 3eur_A Uncharacterized protein 41.9 53 0.0018 25.6 6.1 59 17-78 59-141 (142)
497 1xzo_A BSSCO, hypothetical pro 41.7 4.1 0.00014 33.5 -0.8 86 237-322 35-171 (174)
498 3u5r_E Uncharacterized protein 40.6 34 0.0012 29.6 5.1 67 15-83 82-188 (218)
499 2wul_A Glutaredoxin related pr 40.5 10 0.00035 30.5 1.5 35 106-140 10-47 (118)
500 1q98_A Thiol peroxidase, TPX; 40.3 5.5 0.00019 32.9 -0.2 76 242-318 51-164 (165)
No 1
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.98 E-value=2e-33 Score=300.76 Aligned_cols=301 Identities=16% Similarity=0.159 Sum_probs=234.2
Q ss_pred CCCchHHHhhcCCCCeEEEEeeecccCCcchhccCCcc-ceEEeeecCe--eeEeecCCccHHHHHHHHhCcCCcchhhh
Q psy1110 12 EDTSPLAKEIVKPKAITLGLIERLTEKADPVCTREKAK-KKVRRQKNAE--VKYVYENGNTKDKIIEFVRNPQATSEEVK 88 (366)
Q Consensus 12 ~~~~~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~-Pti~~f~~g~--~~~~y~g~r~~~~i~~fi~~~~~~~~~~~ 88 (366)
+....+|..+.. ..|.|+.+||.. ...+|+++|+. |++.+|++.. ....|.|..+.++|.+|+.....+
T Consensus 369 ~~~~~~A~~~~~-~~i~f~~~D~~~--~~~~~~~~~~~~p~i~l~~~~~~e~~~~~~g~~~~~~i~~f~~~~~~~----- 440 (780)
T 3apo_A 369 PELKKLKTLLKN-EHIQVVRFDCSS--APGICSDLYVFQPSLAVFKGQGTKEYEIHHGKKILYDILAFAKESVNS----- 440 (780)
T ss_dssp GGGGGHHHHHGG-GTEEEEEEEGGG--CHHHHHHTTCCSCEEEEEESSTTSSEEECCSCCCHHHHHHHHHHHHTS-----
T ss_pred HHHHHHHHhhcc-CceeEEEEeCCC--chhhHhhccccCChhhhccCCCcceeeecccHhhHHHHHHHhhhccCC-----
Confidence 456678887753 579999999965 44899999999 9999999754 357789999999999999876554
Q ss_pred ccCCCcCCCCCceEEecchhhhhhhccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccce
Q psy1110 89 KKEQDWADTESEVVHLTDDNFDLVIQEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAV 168 (366)
Q Consensus 89 ~~~~~~~~~~~~v~~l~~~~~~~~i~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v 168 (366)
.+..|+.++|+++ .+++++|.|||+||++|+.+.|.|+++|+.+++++.|+.+|++++..+|+.+++
T Consensus 441 -----------~v~~l~~~~~~~~--~~~~vlv~F~a~wC~~c~~~~p~~~~~a~~~~~~v~~~~vd~~~~~~~~~~~~v 507 (780)
T 3apo_A 441 -----------HVTTLGPQNFPAS--DKEPWLVDFFAPWSPPSRALLPELRKASTLLYGQLKVGTLDCTIHEGLCNMYNI 507 (780)
T ss_dssp -----------CEEECCTTTSCTT--CCSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTTCEEEEEETTTCHHHHHHTTC
T ss_pred -----------CCEecCHHHHHHc--CCCeEEEEEECCCCHHHHHHhHHHHHHHHHhcCCeEEEEEeCCCCHHHHHHcCC
Confidence 6899999999988 789999999999999999999999999999998899999999999999999998
Q ss_pred e---eeeecCCCcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChh-hhHhhhhcccCCCCCcCCccee
Q psy1110 169 V---SSLRNKNGEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVR-SLLLLLLGSYWRPESVGRGWEL 244 (366)
Q Consensus 169 ~---~~l~~~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~~~~~~~~~ 244 (366)
. +++++++|.. ..+.|........+......+ + ....|. ...+.+...--.+..+...|++
T Consensus 508 ~~~Pt~~~~~~g~~-~~~~g~~~~~~l~~fi~~~~~-------------~-~v~~l~~~~f~~~v~~~~~~~~~lv~F~a 572 (780)
T 3apo_A 508 QAYPTTVVFNQSSI-HEYEGHHSAEQILEFIEDLRN-------------P-SVVSLTPSTFNELVKQRKHDEVWMVDFYS 572 (780)
T ss_dssp CSSSEEEEEETTEE-EEECSCSCHHHHHHHHHHHHS-------------C-SEEECCHHHHHHHTTTCCTTCCEEEEEEC
T ss_pred CcCCeEEEEcCCce-eeecCcccHHHHHHHHHhhcc-------------c-ceeecCcccHHHHhhccCCCCeEEEEEEC
Confidence 5 4677777765 667665432221111100000 0 001111 1112222211113345678999
Q ss_pred eeccccccccccC---CCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCce----eeecCC-CCCHHHHHH
Q psy1110 245 RQVGTGKRIKSIN---SGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSV----AFDAGH-LRDASRLVE 316 (366)
Q Consensus 245 ~~c~~c~~~~p~~---~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~----~~~~~g-~~~~e~l~~ 316 (366)
+|||||+++.|.| |+.|+. ++.++.+||+.+..+|.+++|+++||+++|+.|.. ...|.| .++.++|.+
T Consensus 573 p~C~~c~~~~p~~~~lA~~~~~---~v~~~~vd~~~~~~l~~~~~v~~~Pti~~~~~~~~~~~~~~~y~g~~~~~~~l~~ 649 (780)
T 3apo_A 573 PWSHPSQVLMPEWKRMARTLTG---LINVGSVDCGQYHSFCTQENVQRYPEIRFYPQKSSKAYQYHSYNGWNRDAYSLRS 649 (780)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTT---TSEEEEEETTTTHHHHHHTTCCSSSEEEEECCCSSSCCSCEECCCSCCSHHHHHH
T ss_pred CCCHHHHHhhHHHHHHHHHhhC---CeEEEEEECcchHHHHHHcCCCCCCeEEEEcCCCcCccchhhcCCCCCCHHHHHH
Confidence 9999999999997 445553 59999999999999999999999999999988753 456889 899999999
Q ss_pred HHhCCCCCCCCCCCCCCCCCCCCeeEEechhcHHH-HhhccCceEEEEecC
Q psy1110 317 FMRDPTEPPPPPPPEPAWAEEPSEVYHLGADNFAS-TLRKKKHALVMFYAP 366 (366)
Q Consensus 317 fi~~~~~~~~~~~~~~~~~~~~~~v~~lt~~~~~~-~~~~~~~~~v~fy~~ 366 (366)
||.+...+. +.++|.++|.+ ++..+++++|.||||
T Consensus 650 fi~~~~~~~---------------v~~l~~~~~~~~~~~~~~~v~v~F~a~ 685 (780)
T 3apo_A 650 WGLGFLPQA---------------SIDLTPQTFNEKVLQGKTHWVVDFYAP 685 (780)
T ss_dssp HHHTTSCCC---------------SEEECHHHHHHHTTTCSSCEEEEEECT
T ss_pred HHhhhcccc---------------cccCCHHHHHHHHhcCCCeEEEEEECC
Confidence 999988544 89999999976 556678999999986
No 2
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.96 E-value=2.1e-29 Score=245.89 Aligned_cols=282 Identities=15% Similarity=0.176 Sum_probs=203.0
Q ss_pred chHHHhhcCCCCeEEEEeeecccCCcchhccCCcc-ceEEeeec-CeeeEeecCCccHHHHHHHHhCcCCcchhhhccCC
Q psy1110 15 SPLAKEIVKPKAITLGLIERLTEKADPVCTREKAK-KKVRRQKN-AEVKYVYENGNTKDKIIEFVRNPQATSEEVKKKEQ 92 (366)
Q Consensus 15 ~~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~-Pti~~f~~-g~~~~~y~g~r~~~~i~~fi~~~~~~~~~~~~~~~ 92 (366)
..+|..+ ..+.|+.++- . ++|+++||+ |+|.+|++ .+....|.|+++.++|.+|+.....+
T Consensus 55 ~~~A~~~---~~~~F~~t~~---~--~v~~~~~v~~~~i~lfk~f~~~~~~~~g~~~~~~i~~fi~~~~~p--------- 117 (361)
T 3uem_A 55 LQAAEAI---DDIPFGITSN---S--DVFSKYQLDKDGVVLFKKFDEGRNNFEGEVTKENLLDFIKHNQLP--------- 117 (361)
T ss_dssp HHHHHHC---SSSCEEEECC---H--HHHHHTTCSSSEEEEEESSTTSEEECCSCCCHHHHHHHHHHHSSC---------
T ss_pred HHHHhcC---CCceEEEECc---H--HHHHHhCCCCCeEEEEEecCCCccccCCcCCHHHHHHHHHHcCCC---------
Confidence 3455554 3577775444 2 699999999 99999987 34567899999999999999987776
Q ss_pred CcCCCCCceEEecchhhhhhhcc-CCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeecc--CCccccccccee
Q psy1110 93 DWADTESEVVHLTDDNFDLVIQE-ESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGML--RHRPQASNVAVV 169 (366)
Q Consensus 93 ~~~~~~~~v~~l~~~~~~~~i~~-~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~--~~~~~~~~~~v~ 169 (366)
.+..++.+++.+++.+ .++++|+||++||++|+++.|.|+++|+.|++.+.|+.+|++ ++..+|+.+|+.
T Consensus 118 -------~v~~~~~~~~~~~~~~~~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~~~i~f~~vd~~~~~~~~~~~~fgi~ 190 (361)
T 3uem_A 118 -------LVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFIFIDSDHTDNQRILEFFGLK 190 (361)
T ss_dssp -------SEEECSTTTHHHHHSCSCCEEEEEECCSSSSSHHHHHHHHHHHHGGGTTTCEEEEECTTSGGGHHHHHHTTCC
T ss_pred -------cceecCcccHHHHhcCCCCcEEEEEEeCCchhHHHHHHHHHHHHHHccCceEEEEecCChHHHHHHHHHcCCC
Confidence 6899999999998866 467899999999999999999999999999999999999999 789999999875
Q ss_pred -----eeeecCCCcccccCC---CCCCCCCCCccccCCCCCCCCCCCCCCCCCCC-CCCChhhhH--hhhhcccCCCCCc
Q psy1110 170 -----SSLRNKNGEPTTHPS---GTPQTSDTPRTQCCHPAAHSPASPIRQTPHPE-PHRPVRSLL--LLLLGSYWRPESV 238 (366)
Q Consensus 170 -----~~l~~~~G~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~--~~~~~~~~~~~~~ 238 (366)
+++++..|....+|. |........+......+........+...++. ...+|..+. .+........+.+
T Consensus 191 ~~~~P~~~~~~~~~~~~ky~~~~~~~~~~~l~~fi~~~l~g~~~~~~~s~~~p~~~~~~~v~~l~~~~f~~~~~~~~k~~ 270 (361)
T 3uem_A 191 KEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIKPHLMSQELPEDWDKQPVKVLVGKNFEDVAFDEKKNV 270 (361)
T ss_dssp TTTCSEEEEEECC--CCEECCSSCCCCHHHHHHHHHHHHTTCSCCCCBCCCCCTTTTTSSSEEECTTTHHHHHTCTTCEE
T ss_pred ccCCccEEEEEcCCcccccCCCccccCHHHHHHHHHHHhcCCCcccccCCCCCcccccCCcEEeecCchhhhcccCCCcE
Confidence 467777766655664 22211111110000000001111112222221 222232221 1111112345667
Q ss_pred CCcceeeeccccccccccC---CCCCCCCccceeEEEEecccccccccccccccCCeEEEecCC--ceeeecCCCCCHHH
Q psy1110 239 GRGWELRQVGTGKRIKSIN---SGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAG--SVAFDAGHLRDASR 313 (366)
Q Consensus 239 ~~~~~~~~c~~c~~~~p~~---~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G--~~~~~~~g~~~~e~ 313 (366)
...|++.|||||+++.|.| ++.++.. .++.++++|++.+. +.+|+|+++||+++|++| +...+|.|.++.+.
T Consensus 271 lv~f~a~wC~~C~~~~p~~~~la~~~~~~-~~v~~~~vd~~~~~--~~~~~v~~~Pt~~~~~~~~~~~~~~~~G~~~~~~ 347 (361)
T 3uem_A 271 FVEFYAPWCGHCKQLAPIWDKLGETYKDH-ENIVIAKMDSTANE--VEAVKVHSFPTLKFFPASADRTVIDYNGERTLDG 347 (361)
T ss_dssp EEEEECTTCHHHHHHHHHHHHHHHHTTTC-SSEEEEEEETTTCB--CSSCCCCSSSEEEEECSSSSCCCEECCSCSSHHH
T ss_pred EEEEecCcCHhHHHHHHHHHHHHHHhccC-CcEEEEEEECCccc--hhhcCCcccCeEEEEECCCCcceeEecCCCCHHH
Confidence 7889999999999999997 4556543 36999999999887 789999999999999665 56789999999999
Q ss_pred HHHHHhCCCC
Q psy1110 314 LVEFMRDPTE 323 (366)
Q Consensus 314 l~~fi~~~~~ 323 (366)
|.+||+++..
T Consensus 348 l~~~l~~~~~ 357 (361)
T 3uem_A 348 FKKFLESGGQ 357 (361)
T ss_dssp HHHHHTTTSC
T ss_pred HHHHHHhcCC
Confidence 9999998765
No 3
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.95 E-value=1.1e-29 Score=271.68 Aligned_cols=271 Identities=13% Similarity=0.140 Sum_probs=207.1
Q ss_pred chHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCcCCcchhhhccCC
Q psy1110 15 SPLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNPQATSEEVKKKEQ 92 (366)
Q Consensus 15 ~~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~~~~~~~~~~~~~ 92 (366)
..+|+++. ++|.|+.|||.+ +.++|.++||+ ||+.+|++|. +..|.|.++.++|.+|+.+...+
T Consensus 478 ~~~a~~~~--~~v~~~~vd~~~--~~~~~~~~~v~~~Pt~~~~~~g~-~~~~~g~~~~~~l~~fi~~~~~~--------- 543 (780)
T 3apo_A 478 RKASTLLY--GQLKVGTLDCTI--HEGLCNMYNIQAYPTTVVFNQSS-IHEYEGHHSAEQILEFIEDLRNP--------- 543 (780)
T ss_dssp HHHHHHTT--TTCEEEEEETTT--CHHHHHHTTCCSSSEEEEEETTE-EEEECSCSCHHHHHHHHHHHHSC---------
T ss_pred HHHHHHhc--CCeEEEEEeCCC--CHHHHHHcCCCcCCeEEEEcCCc-eeeecCcccHHHHHHHHHhhccc---------
Confidence 45777776 679999999965 55899999999 9999998765 48899999999999999887664
Q ss_pred CcCCCCCceEEecchhhhhhhcc---CCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCccccccccee
Q psy1110 93 DWADTESEVVHLTDDNFDLVIQE---ESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVV 169 (366)
Q Consensus 93 ~~~~~~~~v~~l~~~~~~~~i~~---~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~ 169 (366)
.+..|+.++|++++.. +..++|.||+|||+||+++.|.|+++|+.+++.+.|+.++|+.+..+|+.+++.
T Consensus 544 -------~v~~l~~~~f~~~v~~~~~~~~~lv~F~ap~C~~c~~~~p~~~~lA~~~~~~v~~~~vd~~~~~~l~~~~~v~ 616 (780)
T 3apo_A 544 -------SVVSLTPSTFNELVKQRKHDEVWMVDFYSPWSHPSQVLMPEWKRMARTLTGLINVGSVDCGQYHSFCTQENVQ 616 (780)
T ss_dssp -------SEEECCHHHHHHHTTTCCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEETTTTHHHHHHTTCC
T ss_pred -------ceeecCcccHHHHhhccCCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCCeEEEEEECcchHHHHHHcCCC
Confidence 6899999999998854 578999999999999999999999999999999999999999999999998876
Q ss_pred e---eeecCCCcc----cccCCC-CCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCc
Q psy1110 170 S---SLRNKNGEP----TTHPSG-TPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRG 241 (366)
Q Consensus 170 ~---~l~~~~G~~----~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 241 (366)
+ ++++..|.. ...|.| .+...+..+..... .++ ....|... .+.....-..+.+...
T Consensus 617 ~~Pti~~~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~-------------~~~-~v~~l~~~-~~~~~~~~~~~~v~v~ 681 (780)
T 3apo_A 617 RYPEIRFYPQKSSKAYQYHSYNGWNRDAYSLRSWGLGF-------------LPQ-ASIDLTPQ-TFNEKVLQGKTHWVVD 681 (780)
T ss_dssp SSSEEEEECCCSSSCCSCEECCCSCCSHHHHHHHHHTT-------------SCC-CSEEECHH-HHHHHTTTCSSCEEEE
T ss_pred CCCeEEEEcCCCcCccchhhcCCCCCCHHHHHHHHhhh-------------ccc-ccccCCHH-HHHHHHhcCCCeEEEE
Confidence 4 777777643 334555 22211111110000 000 11111111 1100011123446677
Q ss_pred ceeeeccccccccccCC---CCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCC----CCCHHHH
Q psy1110 242 WELRQVGTGKRIKSINS---GSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGH----LRDASRL 314 (366)
Q Consensus 242 ~~~~~c~~c~~~~p~~~---~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g----~~~~e~l 314 (366)
|++.||++|+++.|.+. +.++ .++.++.+|++.+..++.+|+|+++||+++|++|+.+.++.| .++.+.|
T Consensus 682 F~a~wC~~C~~~~p~~~~la~~~~---~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~G~~~g~~~~~~l 758 (780)
T 3apo_A 682 FYAPWSGPSQNFAPEFELLARMIK---GKVRAGKVDCQAYPQTCQKAGIKAYPSVKLYQYERAKKSIWEEQINSRDAKTI 758 (780)
T ss_dssp EECTTCHHHHHHHHHHHHHHHHHT---TTCEEEEEETTTCHHHHHHTTCCSSSEEEEEEEETTTTEEEEEEECCCCHHHH
T ss_pred EECCCCHHHHHHHHHHHHHHHHhc---CCceEEEEECCCCHHHHHhcCCCcCCEEEEEcCCCccccccCcccCCcCHHHH
Confidence 88899999999999973 3443 359999999999999999999999999999999998777766 5799999
Q ss_pred HHHHhCCCCC
Q psy1110 315 VEFMRDPTEP 324 (366)
Q Consensus 315 ~~fi~~~~~~ 324 (366)
.+||++.+..
T Consensus 759 ~~~l~~~l~~ 768 (780)
T 3apo_A 759 AALIYGKLET 768 (780)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHHHH
Confidence 9999987753
No 4
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.94 E-value=1.5e-26 Score=212.00 Aligned_cols=182 Identities=34% Similarity=0.586 Sum_probs=156.2
Q ss_pred chHHHhhcC-CCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCcCCcchhhhccC
Q psy1110 15 SPLAKEIVK-PKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNPQATSEEVKKKE 91 (366)
Q Consensus 15 ~~la~e~~~-~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~~~~~~~~~~~~ 91 (366)
..+|+++.. ...|.++.|||.. ..++|.+++|+ ||+.+|++|... .|.|.++.++|.+|+.+.....
T Consensus 55 ~~~~~~~~~~~~~~~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~g~~~-~~~g~~~~~~l~~~i~~~~~~~------- 124 (241)
T 3idv_A 55 EKIANILKDKDPPIPVAKIDATS--ASVLASRFDVSGYPTIKILKKGQAV-DYEGSRTQEEIVAKVREVSQPD------- 124 (241)
T ss_dssp HHHHHHHHTSSSCCCEEEEETTT--CHHHHHHTTCCSSSEEEEEETTEEE-ECCSCSCHHHHHHHHHHHHSTT-------
T ss_pred HHHHHHHhhcCCceEEEEEeccC--CHHHHHhcCCCcCCEEEEEcCCCcc-cccCcccHHHHHHHHhhccCcc-------
Confidence 456777762 2349999999965 55999999999 999999988654 7999999999999998866542
Q ss_pred CCcCCCCCceEEecchhhhhhhccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeee
Q psy1110 92 QDWADTESEVVHLTDDNFDLVIQEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSS 171 (366)
Q Consensus 92 ~~~~~~~~~v~~l~~~~~~~~i~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~ 171 (366)
+...++.+..++.++|+.++.++++++|+|||+||++|+.+.|.|+++++.+.+.
T Consensus 125 --~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~~----------------------- 179 (241)
T 3idv_A 125 --WTPPPEVTLVLTKENFDEVVNDADIILVEFYAPWCGHCKKLAPEYEKAAKELSKR----------------------- 179 (241)
T ss_dssp --CCCCCCSSEECCTTTHHHHHHHCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHTS-----------------------
T ss_pred --cccccccceeccHHHHHHhhccCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhcc-----------------------
Confidence 2233457889999999999988999999999999999999999999999998765
Q ss_pred eecCCCcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccc
Q psy1110 172 LRNKNGEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGK 251 (366)
Q Consensus 172 l~~~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~ 251 (366)
T Consensus 180 -------------------------------------------------------------------------------- 179 (241)
T 3idv_A 180 -------------------------------------------------------------------------------- 179 (241)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccCCCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCCCCC
Q psy1110 252 RIKSINSGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPTEPP 325 (366)
Q Consensus 252 ~~~p~~~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~~~~ 325 (366)
..++.++++|++.+..++++|+|+++||+++|++|+.+. |.|.++.+.|++||.+.++|.
T Consensus 180 -------------~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~~~-~~g~~~~~~l~~~l~~~~~~~ 239 (241)
T 3idv_A 180 -------------SPPIPLAKVDATAETDLAKRFDVSGYPTLKIFRKGRPYD-YNGPREKYGIVDYMIEQSGAA 239 (241)
T ss_dssp -------------SSCCCEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEE-CCSCCSHHHHHHHHHHHTTCT
T ss_pred -------------CCcEEEEEEECCCCHHHHHHcCCcccCEEEEEECCeEEE-ecCCCCHHHHHHHHHhhhCCC
Confidence 123788999999999999999999999999999999655 999999999999999988765
No 5
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.91 E-value=1.5e-24 Score=198.34 Aligned_cols=169 Identities=11% Similarity=0.163 Sum_probs=142.5
Q ss_pred chHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCcCCcchhhhccCC
Q psy1110 15 SPLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNPQATSEEVKKKEQ 92 (366)
Q Consensus 15 ~~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~~~~~~~~~~~~~ 92 (366)
..+|+++.+.++|++++|||++ +.++|.++||+ ||+++|+++.....|.|.++.++|.+|+.......
T Consensus 48 ~~~a~~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Ptl~~~~~~~~~~~~~G~~~~~~l~~~~~~~~~~~-------- 117 (229)
T 2ywm_A 48 VEVIGEAVGQDKIKLDIYSPFT--HKEETEKYGVDRVPTIVIEGDKDYGIRYIGLPAGLEFTTLINGIFHVS-------- 117 (229)
T ss_dssp HHHHHHHHCTTTEEEEEECTTT--CHHHHHHTTCCBSSEEEEESSSCCCEEEESCCCTTHHHHHHHHHHHHH--------
T ss_pred HHHHhccCCCCceEEEEecCcc--cHHHHHHcCCCcCcEEEEECCCcccceecCCccHHHHHHHHHHHHhcc--------
Confidence 3455555434789999999966 55999999999 99999987777789999999999999997754321
Q ss_pred CcCCCCCceEEecchhhhhhhccCCeE-EEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeee
Q psy1110 93 DWADTESEVVHLTDDNFDLVIQEESSV-LVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSS 171 (366)
Q Consensus 93 ~~~~~~~~v~~l~~~~~~~~i~~~k~v-lV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~ 171 (366)
+.+..|++++|+.++..++++ +|.||++||++|+.+.|.|++++..+ ..
T Consensus 118 ------~~~~~l~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~-~~----------------------- 167 (229)
T 2ywm_A 118 ------QRKPQLSEKTLELLQVVDIPIEIWVFVTTSCGYCPSAAVMAWDFALAN-DY----------------------- 167 (229)
T ss_dssp ------TTCCSCCHHHHHHHTTCCSCEEEEEEECTTCTTHHHHHHHHHHHHHHC-TT-----------------------
T ss_pred ------CCccCCCHHHHHHHHhcCCCeEEEEEECCCCcchHHHHHHHHHHHHHC-CC-----------------------
Confidence 135678899999988776666 88999999999999999999999887 34
Q ss_pred eecCCCcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccc
Q psy1110 172 LRNKNGEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGK 251 (366)
Q Consensus 172 l~~~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~ 251 (366)
T Consensus 168 -------------------------------------------------------------------------------- 167 (229)
T 2ywm_A 168 -------------------------------------------------------------------------------- 167 (229)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccCCCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCC
Q psy1110 252 RIKSINSGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPT 322 (366)
Q Consensus 252 ~~~p~~~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~ 322 (366)
+.++.+|++.+..++++|+|+++||+++ +|+ +.++.|.++.+.|.+||++..
T Consensus 168 ----------------v~~~~vd~~~~~~l~~~~~v~~~Pt~~~--~G~-~~~~~G~~~~~~l~~~l~~~~ 219 (229)
T 2ywm_A 168 ----------------ITSKVIDASENQDLAEQFQVVGVPKIVI--NKG-VAEFVGAQPENAFLGYIMAVY 219 (229)
T ss_dssp ----------------EEEEEEEGGGCHHHHHHTTCCSSSEEEE--GGG-TEEEESCCCHHHHHHHHHHHH
T ss_pred ----------------eEEEEEECCCCHHHHHHcCCcccCEEEE--CCE-EEEeeCCCCHHHHHHHHHHHh
Confidence 6788899999999999999999999998 898 677999999999999997654
No 6
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.91 E-value=1.9e-24 Score=196.72 Aligned_cols=180 Identities=11% Similarity=0.148 Sum_probs=146.1
Q ss_pred CCchHHHhhcC-CCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeee-EeecCCccHHHHHHHHhCcCCcchhhh
Q psy1110 13 DTSPLAKEIVK-PKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVK-YVYENGNTKDKIIEFVRNPQATSEEVK 88 (366)
Q Consensus 13 ~~~~la~e~~~-~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~-~~y~g~r~~~~i~~fi~~~~~~~~~~~ 88 (366)
...+.-.++++ .++|.++.|||++..+.++|.++||+ ||+.+|++|... ..|.|.++.+.+.+|+.......
T Consensus 40 ~~~~~~~~la~~~~~v~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~~G~~~~~~l~~~l~~~l~~~---- 115 (226)
T 1a8l_A 40 QLKQLVQELSELTDKLSYEIVDFDTPEGKELAKRYRIDRAPATTITQDGKDFGVRYFGLPAGHEFAAFLEDIVDVS---- 115 (226)
T ss_dssp HHHHHHHHHHTTCTTEEEEEEETTSHHHHHHHHHTTCCSSSEEEEEETTBCCSEEEESCCCTTHHHHHHHHHHHHH----
T ss_pred HHHHHHHHHHhhCCceEEEEEeCCCcccHHHHHHcCCCcCceEEEEcCCceeeEEEeccCcHHHHHHHHHHHHhhc----
Confidence 33344444442 25799999999651145999999999 999999988654 78999999999999997754321
Q ss_pred ccCCCcCCCCCceEEecchhhhhhhccCCeE-EEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccc
Q psy1110 89 KKEQDWADTESEVVHLTDDNFDLVIQEESSV-LVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVA 167 (366)
Q Consensus 89 ~~~~~~~~~~~~v~~l~~~~~~~~i~~~k~v-lV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~ 167 (366)
+....|++++++.+...++++ +|.|||+||++|+.+.|.|+++++.+.+.
T Consensus 116 ----------~~~~~l~~~~~~~~~~~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~~~------------------- 166 (226)
T 1a8l_A 116 ----------REETNLMDETKQAIRNIDQDVRILVFVTPTCPYCPLAVRMAHKFAIENTKA------------------- 166 (226)
T ss_dssp ----------HTCCCCCHHHHHHHTTCCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHHHT-------------------
T ss_pred ----------CCCCCCCHHHHHHHHhcCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcccc-------------------
Confidence 124467888999888777777 99999999999999999999999998731
Q ss_pred eeeeeecCCCcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeec
Q psy1110 168 VVSSLRNKNGEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQV 247 (366)
Q Consensus 168 v~~~l~~~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c 247 (366)
T Consensus 167 -------------------------------------------------------------------------------- 166 (226)
T 1a8l_A 167 -------------------------------------------------------------------------------- 166 (226)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccCCCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCC
Q psy1110 248 GTGKRIKSINSGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDP 321 (366)
Q Consensus 248 ~~c~~~~p~~~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~ 321 (366)
...++.++.+|++.+..++.+|+|+++||+++|++|+.+.++.|.++.+.|.+||++.
T Consensus 167 ----------------~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 224 (226)
T 1a8l_A 167 ----------------GKGKILGDMVEAIEYPEWADQYNVMAVPKIVIQVNGEDRVEFEGAYPEKMFLEKLLSA 224 (226)
T ss_dssp ----------------TCCCEEEEEEEGGGCHHHHHHTTCCSSCEEEEEETTEEEEEEESCCCHHHHHHHHHHH
T ss_pred ----------------cCCcEEEEEEEcccCHHHHHhCCCcccCeEEEEeCCceeEEEcCCCCHHHHHHHHHHh
Confidence 0012788999999999999999999999999999999999999999999999999754
No 7
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=99.88 E-value=1.2e-22 Score=185.81 Aligned_cols=144 Identities=36% Similarity=0.677 Sum_probs=127.9
Q ss_pred CCceEEecchhhhhhhccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCCC
Q psy1110 98 ESEVVHLTDDNFDLVIQEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKNG 177 (366)
Q Consensus 98 ~~~v~~l~~~~~~~~i~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~G 177 (366)
.+.+..|++++|++++.++++++|+|||+||++|+.+.|.|+++++.+.+.
T Consensus 14 ~~~v~~l~~~~~~~~~~~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~~----------------------------- 64 (241)
T 3idv_A 14 ENGVLVLNDANFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIANILKDK----------------------------- 64 (241)
T ss_dssp ETTEEEECTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHTS-----------------------------
T ss_pred CCCcEEecccCHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhhc-----------------------------
Confidence 467999999999999999999999999999999999999999999999765
Q ss_pred cccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccC
Q psy1110 178 EPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSIN 257 (366)
Q Consensus 178 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~ 257 (366)
T Consensus 65 -------------------------------------------------------------------------------- 64 (241)
T 3idv_A 65 -------------------------------------------------------------------------------- 64 (241)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCCCCCCCCCCCCCCCCC
Q psy1110 258 SGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPTEPPPPPPPEPAWAEE 337 (366)
Q Consensus 258 ~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~~~~~~~~~~~~~~~~ 337 (366)
..++.++.+|++.+..++++|+|+++||+++|++|+.+ ++.|.++.+.|.+|+.+...+..+ ..
T Consensus 65 -------~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~~-~~~g~~~~~~l~~~i~~~~~~~~~--------~~ 128 (241)
T 3idv_A 65 -------DPPIPVAKIDATSASVLASRFDVSGYPTIKILKKGQAV-DYEGSRTQEEIVAKVREVSQPDWT--------PP 128 (241)
T ss_dssp -------SSCCCEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEE-ECCSCSCHHHHHHHHHHHHSTTCC--------CC
T ss_pred -------CCceEEEEEeccCCHHHHHhcCCCcCCEEEEEcCCCcc-cccCcccHHHHHHHHhhccCcccc--------cc
Confidence 12377899999999999999999999999999999966 799999999999999988765422 22
Q ss_pred CCeeEEechhcHHHHhhccCceEEEEecC
Q psy1110 338 PSEVYHLGADNFASTLRKKKHALVMFYAP 366 (366)
Q Consensus 338 ~~~v~~lt~~~~~~~~~~~~~~~v~fy~~ 366 (366)
++.+..++.++|..++..+++++|.||+|
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~v~f~a~ 157 (241)
T 3idv_A 129 PEVTLVLTKENFDEVVNDADIILVEFYAP 157 (241)
T ss_dssp CCSSEECCTTTHHHHHHHCSEEEEEEECT
T ss_pred cccceeccHHHHHHhhccCCeEEEEEECC
Confidence 34588999999999999989999999986
No 8
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.88 E-value=4.1e-22 Score=201.59 Aligned_cols=191 Identities=21% Similarity=0.433 Sum_probs=161.7
Q ss_pred chHHHhhcCC-CCeEEEEeeecccCCcchhccCCcc------ceEEeeecCeeeEeecCCccHH--HHHHHHhCcCCcch
Q psy1110 15 SPLAKEIVKP-KAITLGLIERLTEKADPVCTREKAK------KKVRRQKNAEVKYVYENGNTKD--KIIEFVRNPQATSE 85 (366)
Q Consensus 15 ~~la~e~~~~-~~I~~~~Vdc~~~~~~~lc~~~~I~------Pti~~f~~g~~~~~y~g~r~~~--~i~~fi~~~~~~~~ 85 (366)
.++|+++... ..|.|+.+|+ ..+...+..+|+. |.+.++..+..++.+++..+.+ +|.+|+.+......
T Consensus 260 ~~vA~~~~~k~~~i~F~~~D~--~~~~~~l~~~gl~~~~~~~P~~~i~~~~~~ky~~~~~~t~e~~~l~~f~~~~~~g~~ 337 (481)
T 3f8u_A 260 MMVAKKFLDAGHKLNFAVASR--KTFSHELSDFGLESTAGEIPVVAIRTAKGEKFVMQEEFSRDGKALERFLQDYFDGNL 337 (481)
T ss_dssp HHHHHHHHHTTCCCEEEEEET--TTTHHHHGGGTCCCCTTCSCEEEEECSSSCEEECCSCCCTTSHHHHHHHHHHHHTCC
T ss_pred HHHHHHhcCCCceEEEEEEcH--HHHHHHHHHcCCCcccCCCcEEEEEcCCCcccCCCcccCccHHHHHHHHHHHhcCCc
Confidence 3578888721 2399999999 4566888898883 8999987656678888888999 99999999888877
Q ss_pred hhhccCCCcCC-CCCceEEecchhhhhhhcc-CCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccc
Q psy1110 86 EVKKKEQDWAD-TESEVVHLTDDNFDLVIQE-ESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQA 163 (366)
Q Consensus 86 ~~~~~~~~~~~-~~~~v~~l~~~~~~~~i~~-~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~ 163 (366)
.+..++.+++. ..+.+..+++.+|+.++.. +++++|+|||+||+||+.+.|.|+++++.+.+.
T Consensus 338 ~~~~~s~~~p~~~~~~v~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~--------------- 402 (481)
T 3f8u_A 338 KRYLKSEPIPESNDGPVKVVVAENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKD--------------- 402 (481)
T ss_dssp CCCCCCCCCCSCCCSSSEEECTTTHHHHHTCTTCEEEEEEECTTBHHHHHHHHHHHHHHHHTTTC---------------
T ss_pred ccccccCCCCCCCCCCeEEecccCHHHHhhcCCCcEEEEEecCcChhHHHhhHHHHHHHHHhccC---------------
Confidence 77777777654 4567899999999998755 899999999999999999999999999998764
Q ss_pred cccceeeeeecCCCcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcce
Q psy1110 164 SNVAVVSSLRNKNGEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWE 243 (366)
Q Consensus 164 ~~~~v~~~l~~~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 243 (366)
T Consensus 403 -------------------------------------------------------------------------------- 402 (481)
T 3f8u_A 403 -------------------------------------------------------------------------------- 402 (481)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeeccccccccccCCCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCce--eeecCCCCCHHHHHHHHhCC
Q psy1110 244 LRQVGTGKRIKSINSGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSV--AFDAGHLRDASRLVEFMRDP 321 (366)
Q Consensus 244 ~~~c~~c~~~~p~~~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~--~~~~~g~~~~e~l~~fi~~~ 321 (366)
.++.++++|++.+ +++.+|+|+++||+++|++|.. ..+|.|.++.+.|++||+++
T Consensus 403 ----------------------~~v~~~~id~~~~-~~~~~~~v~~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~ 459 (481)
T 3f8u_A 403 ----------------------PNIVIAKMDATAN-DVPSPYEVRGFPTIYFSPANKKLNPKKYEGGRELSDFISYLQRE 459 (481)
T ss_dssp ----------------------SSEEEEEEETTSS-CCCTTCCCCSSSEEEEECTTCTTSCEECCSCCSHHHHHHHHHHH
T ss_pred ----------------------CCEEEEEEECCch-hhHhhCCCcccCEEEEEeCCCeEeeeEeCCCCCHHHHHHHHHHh
Confidence 2378999999888 7889999999999999988875 68999999999999999988
Q ss_pred CCCC
Q psy1110 322 TEPP 325 (366)
Q Consensus 322 ~~~~ 325 (366)
....
T Consensus 460 ~~~~ 463 (481)
T 3f8u_A 460 ATNP 463 (481)
T ss_dssp CSSC
T ss_pred cCCc
Confidence 7654
No 9
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.87 E-value=7.3e-22 Score=201.18 Aligned_cols=189 Identities=24% Similarity=0.381 Sum_probs=155.8
Q ss_pred chHHHhhcCCCCeEEEEeeecccCCcchhccCCcc---ceEEeeec-CeeeEeec--CC-----------ccHHHHHHHH
Q psy1110 15 SPLAKEIVKPKAITLGLIERLTEKADPVCTREKAK---KKVRRQKN-AEVKYVYE--NG-----------NTKDKIIEFV 77 (366)
Q Consensus 15 ~~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~---Pti~~f~~-g~~~~~y~--g~-----------r~~~~i~~fi 77 (366)
..+|+.+. +++.|+.+||.. +..+|+.+|+. |++.++.. ...++.+. ++ .+.++|.+|+
T Consensus 260 ~~~a~~~~--~~i~F~~id~~~--~~~~~~~~gl~~~~P~v~i~~~~~~~ky~~~~~~~~~~~~~~~~~~~~~~~l~~f~ 335 (504)
T 2b5e_A 260 TELAKKNR--GLMNFVSIDARK--FGRHAGNLNMKEQFPLFAIHDMTEDLKYGLPQLSEEAFDELSDKIVLESKAIESLV 335 (504)
T ss_dssp HHHHHHTT--TTCEEEEEEHHH--HTTHHHHTTCCSCSSEEEEEETTTTEEEECCCCCHHHHHTCCSCCCCCHHHHHHHH
T ss_pred HHHHHhcC--CeeEEEEEehhh--hHHHHHHcCCcccCCEEEEEeCCcCcccCCCCCccchhhccccccccCHHHHHHHH
Confidence 46777777 789999999965 55899999993 99999986 33355555 55 7899999999
Q ss_pred hCcCCcchhhhccCCCcCC-CCCceEEecchhhhhhh-ccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEee
Q psy1110 78 RNPQATSEEVKKKEQDWAD-TESEVVHLTDDNFDLVI-QEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMG 155 (366)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~i-~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~ 155 (366)
.+...+...|..++.+++. ..+.+..|++++|+.++ +++++++|+|||+||+||+.+.|.|+++++.+...
T Consensus 336 ~~~~~g~~~p~~~s~~~p~~~~~~v~~l~~~~f~~~v~~~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~------- 408 (504)
T 2b5e_A 336 KDFLKGDASPIVKSQEIFENQDSSVFQLVGKNHDEIVNDPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANA------- 408 (504)
T ss_dssp HHHHHTCCCCCCCCCCCCCCCSCSEEEECTTTHHHHHHCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHHHH-------
T ss_pred HHHHcCCCChhhhcCCCCccccccceecccccHHHhhccCCCCEEEEEECCCChhHHHHhHHHHHHHHHhhcc-------
Confidence 9988776666666665543 45789999999999876 55899999999999999999999999999998722
Q ss_pred ccCCcccccccceeeeeecCCCcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCC
Q psy1110 156 MLRHRPQASNVAVVSSLRNKNGEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRP 235 (366)
Q Consensus 156 ~~~~~~~~~~~~v~~~l~~~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 235 (366)
T Consensus 409 -------------------------------------------------------------------------------- 408 (504)
T 2b5e_A 409 -------------------------------------------------------------------------------- 408 (504)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcCCcceeeeccccccccccCCCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCce--eeecCCCCCHHH
Q psy1110 236 ESVGRGWELRQVGTGKRIKSINSGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSV--AFDAGHLRDASR 313 (366)
Q Consensus 236 ~~~~~~~~~~~c~~c~~~~p~~~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~--~~~~~g~~~~e~ 313 (366)
..++.++++|++.+... . |+|+++||+++|++|+. ..+|.|.++.+.
T Consensus 409 -----------------------------~~~v~~~~vd~~~~~~~-~-~~v~~~Pt~~~~~~G~~~~~~~~~G~~~~~~ 457 (504)
T 2b5e_A 409 -----------------------------TSDVLIAKLDHTENDVR-G-VVIEGYPTIVLYPGGKKSESVVYQGSRSLDS 457 (504)
T ss_dssp -----------------------------CSSCEEEEEEGGGCCCS-S-CCCSSSSEEEEECCTTSCCCCBCCSCCCHHH
T ss_pred -----------------------------CCcEEEEEecCCccccc-c-CCceecCeEEEEeCCceecceEecCCCCHHH
Confidence 02378899999887654 4 99999999999999986 788999999999
Q ss_pred HHHHHhCCCCCC
Q psy1110 314 LVEFMRDPTEPP 325 (366)
Q Consensus 314 l~~fi~~~~~~~ 325 (366)
|++||+++....
T Consensus 458 l~~~i~~~~~~~ 469 (504)
T 2b5e_A 458 LFDFIKENGHFD 469 (504)
T ss_dssp HHHHHHHHCTTC
T ss_pred HHHHHHhcCCCC
Confidence 999999887644
No 10
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.85 E-value=4.6e-21 Score=186.81 Aligned_cols=135 Identities=21% Similarity=0.270 Sum_probs=121.1
Q ss_pred CCCceEEecchhhhhhhccCCeEEEEEECCCChhhhcccHH-------HHHHHHHHhccccEEEeeccCCccccccccee
Q psy1110 97 TESEVVHLTDDNFDLVIQEESSVLVMFYAPWCGHCKKLKPE-------YEEAAATMKQQRAYYGMGMLRHRPQASNVAVV 169 (366)
Q Consensus 97 ~~~~v~~l~~~~~~~~i~~~k~vlV~F~a~wC~~Ck~~~p~-------~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~ 169 (366)
.++.|..|++++|+++++++++++|+||||||+ |+.++|. |+++++.+++.
T Consensus 9 ~~~~v~~l~~~~f~~~i~~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~~~--------------------- 66 (350)
T 1sji_A 9 GKDRVVSLTEKNFKQVLKKYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLEHK--------------------- 66 (350)
T ss_dssp CCCCCEEECHHHHHHHHTTCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGGGS---------------------
T ss_pred CCCccEECCHHHHHHHHhhCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHhhc---------------------
Confidence 345789999999999999899999999999999 9999999 88888877653
Q ss_pred eeeecCCCcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccc
Q psy1110 170 SSLRNKNGEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGT 249 (366)
Q Consensus 170 ~~l~~~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~ 249 (366)
T Consensus 67 -------------------------------------------------------------------------------- 66 (350)
T 1sji_A 67 -------------------------------------------------------------------------------- 66 (350)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccCCCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCCCCCCCCC
Q psy1110 250 GKRIKSINSGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPTEPPPPPP 329 (366)
Q Consensus 250 c~~~~p~~~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~~~~~~~~ 329 (366)
++.++++||+.+..+|++|+|+++||+++|++|+ ...|.|.++.+.|.+|+.+.+.|+
T Consensus 67 -----------------~v~~~~Vd~~~~~~l~~~~~v~~~Pt~~~~~~g~-~~~~~G~~~~~~l~~~i~~~~~~~---- 124 (350)
T 1sji_A 67 -----------------DIGFVMVDAKKEAKLAKKLGFDEEGSLYVLKGDR-TIEFDGEFAADVLVEFLLDLIEDP---- 124 (350)
T ss_dssp -----------------SEEEEEEETTTTHHHHHHHTCCSTTEEEEEETTE-EEEECSCCCHHHHHHHHHTTSSCS----
T ss_pred -----------------CcEEEEEeCCCCHHHHHhcCCCccceEEEEECCc-EEEecCCCCHHHHHHHHHHhcCCc----
Confidence 2789999999999999999999999999999999 679999999999999999999877
Q ss_pred CCCCCCCCCCeeEEec-hhcHHHHhh-ccCceEEEEecC
Q psy1110 330 PEPAWAEEPSEVYHLG-ADNFASTLR-KKKHALVMFYAP 366 (366)
Q Consensus 330 ~~~~~~~~~~~v~~lt-~~~~~~~~~-~~~~~~v~fy~~ 366 (366)
+.+|+ .++++.++. +++.++|.||++
T Consensus 125 -----------~~~l~~~~~~~~~~~~~~~~~vv~ff~~ 152 (350)
T 1sji_A 125 -----------VEIINSKLEVQAFERIEDQIKLIGFFKS 152 (350)
T ss_dssp -----------EEECCSHHHHHHHHHCCSSCEEEEECSC
T ss_pred -----------ceeccchHHHHHHhccCCCcEEEEEECC
Confidence 88995 688999998 778889999875
No 11
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.84 E-value=4.6e-21 Score=188.56 Aligned_cols=137 Identities=17% Similarity=0.255 Sum_probs=120.5
Q ss_pred CCCCceEEecchhhhhhhccCCeEEEEEECCCChhhhccc------HHHHHHHHHHhccccEEEeeccCCccccccccee
Q psy1110 96 DTESEVVHLTDDNFDLVIQEESSVLVMFYAPWCGHCKKLK------PEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVV 169 (366)
Q Consensus 96 ~~~~~v~~l~~~~~~~~i~~~k~vlV~F~a~wC~~Ck~~~------p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~ 169 (366)
+..+.|..|+.+||+.+++++++++|+||||||+||+... |.|+++++.+++.
T Consensus 10 ~~~~~v~~lt~~~f~~~i~~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~~~--------------------- 68 (367)
T 3us3_A 10 DGVDRVINVNAKNYKNVFKKYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLEDK--------------------- 68 (367)
T ss_dssp CCCCCCEECCTTTHHHHHHHCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHTTT---------------------
T ss_pred CCCCccEECCHHHHHHHHhhCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhhcC---------------------
Confidence 3456899999999999999899999999999999974333 6899999888653
Q ss_pred eeeecCCCcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccc
Q psy1110 170 SSLRNKNGEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGT 249 (366)
Q Consensus 170 ~~l~~~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~ 249 (366)
T Consensus 69 -------------------------------------------------------------------------------- 68 (367)
T 3us3_A 69 -------------------------------------------------------------------------------- 68 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccCCCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCCCCCCCCC
Q psy1110 250 GKRIKSINSGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPTEPPPPPP 329 (366)
Q Consensus 250 c~~~~p~~~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~~~~~~~~ 329 (366)
++.++++||+.+..+|++|+|+++|||++|++|+. ..|.|.|+.+.|++||.+.++|.
T Consensus 69 -----------------~v~~~~Vd~~~~~~l~~~~~V~~~PTl~~f~~G~~-~~y~G~~~~~~i~~~i~~~~~~~---- 126 (367)
T 3us3_A 69 -----------------GVGFGLVDSEKDAAVAKKLGLTEEDSIYVFKEDEV-IEYDGEFSADTLVEFLLDVLEDP---- 126 (367)
T ss_dssp -----------------TEEEEEEETTTTHHHHHHHTCCSTTEEEEEETTEE-EECCSCCSHHHHHHHHHHHHSCS----
T ss_pred -----------------CceEEEEeCcccHHHHHHcCCCcCceEEEEECCcE-EEeCCCCCHHHHHHHHHHhcCCC----
Confidence 27899999999999999999999999999999986 59999999999999999998877
Q ss_pred CCCCCCCCCCeeEEec-hhcHHHHhh-ccCceEEEEecC
Q psy1110 330 PEPAWAEEPSEVYHLG-ADNFASTLR-KKKHALVMFYAP 366 (366)
Q Consensus 330 ~~~~~~~~~~~v~~lt-~~~~~~~~~-~~~~~~v~fy~~ 366 (366)
+.+++ .++++.++. +.+.++|.||++
T Consensus 127 -----------v~~i~~~~~~~~~~~~~~~~~vv~ff~~ 154 (367)
T 3us3_A 127 -----------VELIEGERELQAFENIEDEIKLIGYFKN 154 (367)
T ss_dssp -----------EEECCSHHHHHHHHHCCSSCEEEEECSC
T ss_pred -----------cEEcCCHHHHHHHhccCCCcEEEEEECC
Confidence 88995 589999998 678889999864
No 12
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=99.84 E-value=1.3e-20 Score=183.48 Aligned_cols=170 Identities=23% Similarity=0.290 Sum_probs=138.6
Q ss_pred CchHHHhhcCCCCeEEEEeeecccCCcchhccCCcc----ceEEeeecCeeeEeec---CCccHHHHHHHHhCcCCcchh
Q psy1110 14 TSPLAKEIVKPKAITLGLIERLTEKADPVCTREKAK----KKVRRQKNAEVKYVYE---NGNTKDKIIEFVRNPQATSEE 86 (366)
Q Consensus 14 ~~~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~----Pti~~f~~g~~~~~y~---g~r~~~~i~~fi~~~~~~~~~ 86 (366)
...+|+++. ++|.|+.|||....+..+|+++||+ |++++|..+.....|. |.++.++|.+|+.+...+...
T Consensus 157 ~~~~A~~~~--~~i~f~~vd~~~~~~~~~~~~fgi~~~~~P~~~~~~~~~~~~ky~~~~~~~~~~~l~~fi~~~l~g~~~ 234 (361)
T 3uem_A 157 FKTAAESFK--GKILFIFIDSDHTDNQRILEFFGLKKEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIK 234 (361)
T ss_dssp HHHHHGGGT--TTCEEEEECTTSGGGHHHHHHTTCCTTTCSEEEEEECC--CCEECCSSCCCCHHHHHHHHHHHHTTCSC
T ss_pred HHHHHHHcc--CceEEEEecCChHHHHHHHHHcCCCccCCccEEEEEcCCcccccCCCccccCHHHHHHHHHHHhcCCCc
Confidence 346777777 7799999999743567999999996 9999999866555665 789999999999998888777
Q ss_pred hhccCCCcCC--CCCceEEecchhhhhhh-ccCCeEEEEEECCCChhhhcccHHHHHHHHHHhcc--ccEEEeeccCCcc
Q psy1110 87 VKKKEQDWAD--TESEVVHLTDDNFDLVI-QEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQ--RAYYGMGMLRHRP 161 (366)
Q Consensus 87 ~~~~~~~~~~--~~~~v~~l~~~~~~~~i-~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~--v~~~~v~~~~~~~ 161 (366)
|..++.+++. ..+.+..|++.+|+.++ .++++++|+|||+||+||+++.|.|+++++.+++. +.++.+|++.+.
T Consensus 235 ~~~~s~~~p~~~~~~~v~~l~~~~f~~~~~~~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~~~~~v~~~~vd~~~~~- 313 (361)
T 3uem_A 235 PHLMSQELPEDWDKQPVKVLVGKNFEDVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANE- 313 (361)
T ss_dssp CCCBCCCCCTTTTTSSSEEECTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTCSSEEEEEEETTTCB-
T ss_pred ccccCCCCCcccccCCcEEeecCchhhhcccCCCcEEEEEecCcCHhHHHHHHHHHHHHHHhccCCcEEEEEEECCccc-
Confidence 7777766654 45679999999999977 57899999999999999999999999999999875 889999998776
Q ss_pred ccccccee---eeeecCCC--cccccCCCCC
Q psy1110 162 QASNVAVV---SSLRNKNG--EPTTHPSGTP 187 (366)
Q Consensus 162 ~~~~~~v~---~~l~~~~G--~~~~~~~g~~ 187 (366)
++.+++. +++++.+| .....+.|..
T Consensus 314 -~~~~~v~~~Pt~~~~~~~~~~~~~~~~G~~ 343 (361)
T 3uem_A 314 -VEAVKVHSFPTLKFFPASADRTVIDYNGER 343 (361)
T ss_dssp -CSSCCCCSSSEEEEECSSSSCCCEECCSCS
T ss_pred -hhhcCCcccCeEEEEECCCCcceeEecCCC
Confidence 6777765 47777554 5667777654
No 13
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.84 E-value=3.1e-21 Score=190.48 Aligned_cols=139 Identities=27% Similarity=0.574 Sum_probs=110.3
Q ss_pred CceEEecchhhhhhhccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCCCc
Q psy1110 99 SEVVHLTDDNFDLVIQEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKNGE 178 (366)
Q Consensus 99 ~~v~~l~~~~~~~~i~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~G~ 178 (366)
+.|..|++++|+.+++++++++|+|||+||+||+++.|.|+++++.++...
T Consensus 5 ~~v~~l~~~~f~~~~~~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~~~~----------------------------- 55 (382)
T 2r2j_A 5 SEITSLDTENIDEILNNADVALVNFYADWCRFSQMLHPIFEEASDVIKEEF----------------------------- 55 (382)
T ss_dssp ---CBCCTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTCC-----------------------------
T ss_pred CceEECCHHHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHHHhhc-----------------------------
Confidence 468899999999999889999999999999999999999999999986530
Q ss_pred ccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccCC
Q psy1110 179 PTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSINS 258 (366)
Q Consensus 179 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~~ 258 (366)
T Consensus 56 -------------------------------------------------------------------------------- 55 (382)
T 2r2j_A 56 -------------------------------------------------------------------------------- 55 (382)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceee-ecCCCCCHHHHHHHHhCCCCCCCCCCCCCCCCCC
Q psy1110 259 GSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAF-DAGHLRDASRLVEFMRDPTEPPPPPPPEPAWAEE 337 (366)
Q Consensus 259 ~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~-~~~g~~~~e~l~~fi~~~~~~~~~~~~~~~~~~~ 337 (366)
+...++.++++||+.+..+|++|+|+++||+++|++|+.+. .|.|.++.+.|++||.+.+.++
T Consensus 56 ----~~~~~v~~~~Vd~~~~~~l~~~~~v~~~Pt~~~f~~G~~~~~~~~G~~~~~~l~~~i~~~~~~~------------ 119 (382)
T 2r2j_A 56 ----PNENQVVFARVDCDQHSDIAQRYRISKYPTLKLFRNGMMMKREYRGQRSVKALADYIRQQKSDP------------ 119 (382)
T ss_dssp -------CCEEEEEEETTTCHHHHHHTTCCEESEEEEEETTEEEEEECCSCCSHHHHHHHHHHHHSCC------------
T ss_pred ----CCCCceEEEEEECCccHHHHHhcCCCcCCEEEEEeCCcEeeeeecCcchHHHHHHHHHHhccCC------------
Confidence 00123889999999999999999999999999999999876 5999999999999999999876
Q ss_pred CCeeEEech-hcHHHHhhccCceEEEEecC
Q psy1110 338 PSEVYHLGA-DNFASTLRKKKHALVMFYAP 366 (366)
Q Consensus 338 ~~~v~~lt~-~~~~~~~~~~~~~~v~fy~~ 366 (366)
+.+++. +++.. +..++.++|.||++
T Consensus 120 ---v~~l~~~~~l~~-l~~~~~~~v~ff~~ 145 (382)
T 2r2j_A 120 ---IQEIRDLAEITT-LDRSKRNIIGYFEQ 145 (382)
T ss_dssp ---CEEC-------------CCEEEEEESC
T ss_pred ---ceecCCHHHHHH-hcCCCCEEEEEECC
Confidence 777754 56777 66677888888863
No 14
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=99.84 E-value=9.2e-21 Score=191.65 Aligned_cols=133 Identities=38% Similarity=0.655 Sum_probs=122.8
Q ss_pred CceEEecchhhhhhhccC---CeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecC
Q psy1110 99 SEVVHLTDDNFDLVIQEE---SSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNK 175 (366)
Q Consensus 99 ~~v~~l~~~~~~~~i~~~---k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~ 175 (366)
+.|..|++++|++++.++ ++++|+|||+||+||+.+.|.|+++++.+.+.
T Consensus 1 s~v~~l~~~~f~~~i~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~--------------------------- 53 (481)
T 3f8u_A 1 SDVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKGI--------------------------- 53 (481)
T ss_dssp CCCEEECTTTHHHHTTCCSSSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT---------------------------
T ss_pred CceEEecHHHHHHHHHhCCCCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcCc---------------------------
Confidence 368899999999999777 99999999999999999999999999998776
Q ss_pred CCcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccc
Q psy1110 176 NGEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKS 255 (366)
Q Consensus 176 ~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p 255 (366)
T Consensus 54 -------------------------------------------------------------------------------- 53 (481)
T 3f8u_A 54 -------------------------------------------------------------------------------- 53 (481)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCCCCCCCCCCCCCCC
Q psy1110 256 INSGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPTEPPPPPPPEPAWA 335 (366)
Q Consensus 256 ~~~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~~~~~~~~~~~~~~ 335 (366)
+.++++||+.+..+|++|+|+++||+++|++|+.+.+|.|.++.+.|.+|+.+.+.|.
T Consensus 54 ------------v~~~~vd~~~~~~l~~~~~v~~~Ptl~~~~~g~~~~~~~G~~~~~~l~~~~~~~~~~~---------- 111 (481)
T 3f8u_A 54 ------------VPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPA---------- 111 (481)
T ss_dssp ------------CCEEEEETTTCHHHHHHTTCCEESEEEEEETTEEEEECCSCSSHHHHHHHHHHHTSCS----------
T ss_pred ------------eEEEEEECCCCHHHHHhcCCCCCCEEEEEeCCceeeeecCccCHHHHHHHHHhhcccC----------
Confidence 6788999999999999999999999999999998999999999999999999999877
Q ss_pred CCCCeeEEe-chhcHHHHhhccCceEEEEec
Q psy1110 336 EEPSEVYHL-GADNFASTLRKKKHALVMFYA 365 (366)
Q Consensus 336 ~~~~~v~~l-t~~~~~~~~~~~~~~~v~fy~ 365 (366)
+.++ +.++++.++..+..++|.||.
T Consensus 112 -----~~~i~~~~~~~~~~~~~~~~vv~~~~ 137 (481)
T 3f8u_A 112 -----SVPLRTEEEFKKFISDKDASIVGFFD 137 (481)
T ss_dssp -----EEEECSHHHHHHHTTSSSCEEEEEES
T ss_pred -----ceecCCHHHHHHHHhcCCcEEEEEEC
Confidence 8888 668899999988898998884
No 15
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.83 E-value=3.2e-20 Score=177.89 Aligned_cols=135 Identities=33% Similarity=0.580 Sum_probs=115.4
Q ss_pred CCCCceEEecchhhhhhh-ccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeec
Q psy1110 96 DTESEVVHLTDDNFDLVI-QEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRN 174 (366)
Q Consensus 96 ~~~~~v~~l~~~~~~~~i-~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~ 174 (366)
..++.+..|+.++|++++ +.+++++|+|||+||++|+.+.|.|+++++.+.+.
T Consensus 14 ~~~~~vv~lt~~~f~~~i~~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~~~-------------------------- 67 (298)
T 3ed3_A 14 DSDPHISELTPKSFDKAIHNTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLDGV-------------------------- 67 (298)
T ss_dssp SSCTTCEECCHHHHHHHHTSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT--------------------------
T ss_pred CCCCCeEEeCHHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHccCC--------------------------
Confidence 345689999999999988 56889999999999999999999999999998766
Q ss_pred CCCcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeecccccccc
Q psy1110 175 KNGEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIK 254 (366)
Q Consensus 175 ~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~ 254 (366)
T Consensus 68 -------------------------------------------------------------------------------- 67 (298)
T 3ed3_A 68 -------------------------------------------------------------------------------- 67 (298)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCCCCCCccceeEEEEecc--cccccccccccccCCeEEEecCCc-----------------eeeecCCCCCHHHHH
Q psy1110 255 SINSGSFSPRQITGILAAVDVT--REKSLGKRFDIKGFPTLKYFRAGS-----------------VAFDAGHLRDASRLV 315 (366)
Q Consensus 255 p~~~~~~~~~~~~v~~a~vd~~--~~~~l~~~~~I~~~Ptl~~fk~G~-----------------~~~~~~g~~~~e~l~ 315 (366)
+.++.+||+ .+..+|.+|+|+++||+++|++|+ ....|.|.|+.+.|+
T Consensus 68 -------------~~~~~v~~d~~~~~~l~~~~~I~~~Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~ 134 (298)
T 3ed3_A 68 -------------VQVAAVNCDLNKNKALCAKYDVNGFPTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIV 134 (298)
T ss_dssp -------------SEEEEEETTSTTTHHHHHHTTCCBSSEEEEEECCCC-------------CCCEEEECCSCCSHHHHH
T ss_pred -------------cEEEEEEccCccCHHHHHhCCCCccceEEEEECCceeecccccccccccccccceeecCCcCHHHHH
Confidence 456666665 677899999999999999999997 367899999999999
Q ss_pred HHHhCCCCCCCCCCCCCCCCCCCCeeEEec-hhcHHHHhhccCceEEEEe
Q psy1110 316 EFMRDPTEPPPPPPPEPAWAEEPSEVYHLG-ADNFASTLRKKKHALVMFY 364 (366)
Q Consensus 316 ~fi~~~~~~~~~~~~~~~~~~~~~~v~~lt-~~~~~~~~~~~~~~~v~fy 364 (366)
+|+.+.+.+. +..|+ .++++.++.+.....|++|
T Consensus 135 ~fl~~~~~~~---------------v~~i~~~~~l~~~l~~~~~~~vi~f 169 (298)
T 3ed3_A 135 DFSLSRIRSY---------------VKKFVRIDTLGSLLRKSPKLSVVLF 169 (298)
T ss_dssp HHHHTTCCCC---------------EEECSCGGGHHHHHTSCSSEEEEEE
T ss_pred HHHHHhcccc---------------cEEcCCHHHHHHHHhcCCceEEEEE
Confidence 9999999877 88884 5889999987544455554
No 16
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=99.83 E-value=1.4e-20 Score=191.58 Aligned_cols=138 Identities=35% Similarity=0.619 Sum_probs=123.5
Q ss_pred CcCCCCCceEEecchhhhhhhccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeee
Q psy1110 93 DWADTESEVVHLTDDNFDLVIQEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSL 172 (366)
Q Consensus 93 ~~~~~~~~v~~l~~~~~~~~i~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l 172 (366)
+.....+.|..|++++|+++++++++++|+|||+||+||+.+.|.|+++++.+.+.
T Consensus 8 ~~~~~~~~v~~l~~~~f~~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~~------------------------ 63 (504)
T 2b5e_A 8 AVAPEDSAVVKLATDSFNEYIQSHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVEK------------------------ 63 (504)
T ss_dssp SSCCTTSSCEECCTTTHHHHHTTCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT------------------------
T ss_pred CCCCCCCCcEECCHHHHHHHHhcCCeEEEEEECCCCHHHHHhHHHHHHHHHHhccC------------------------
Confidence 33445678999999999999999999999999999999999999999999988653
Q ss_pred ecCCCcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeecccccc
Q psy1110 173 RNKNGEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKR 252 (366)
Q Consensus 173 ~~~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~ 252 (366)
T Consensus 64 -------------------------------------------------------------------------------- 63 (504)
T 2b5e_A 64 -------------------------------------------------------------------------------- 63 (504)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCCCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCce--eeecCCCCCHHHHHHHHhCCCCCCCCCCC
Q psy1110 253 IKSINSGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSV--AFDAGHLRDASRLVEFMRDPTEPPPPPPP 330 (366)
Q Consensus 253 ~~p~~~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~--~~~~~g~~~~e~l~~fi~~~~~~~~~~~~ 330 (366)
++.++++||+.+..+|++|+|+++||+++|++|+. ..+|.|.++.+.|.+||.+.+.|.
T Consensus 64 --------------~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~l~~~~~~~----- 124 (504)
T 2b5e_A 64 --------------NITLAQIDCTENQDLCMEHNIPGFPSLKIFKNSDVNNSIDYEGPRTAEAIVQFMIKQSQPA----- 124 (504)
T ss_dssp --------------TCEEEEEETTTCHHHHHHTTCCSSSEEEEEETTCTTCEEECCSCCSHHHHHHHHHHHTSCS-----
T ss_pred --------------CeEEEEEECCCCHHHHHhcCCCcCCEEEEEeCCccccceeecCCCCHHHHHHHHHHhcCCc-----
Confidence 17889999999999999999999999999999997 889999999999999999999877
Q ss_pred CCCCCCCCCeeEEechhcHHHHhhccC--ceEEEEec
Q psy1110 331 EPAWAEEPSEVYHLGADNFASTLRKKK--HALVMFYA 365 (366)
Q Consensus 331 ~~~~~~~~~~v~~lt~~~~~~~~~~~~--~~~v~fy~ 365 (366)
+.+++. ++.++..++ ..+|.||.
T Consensus 125 ----------v~~i~~--~~~~~~~~~~~~~~v~~f~ 149 (504)
T 2b5e_A 125 ----------VAVVAD--LPAYLANETFVTPVIVQSG 149 (504)
T ss_dssp ----------EEECSC--HHHHHHHSCCSSCEEEEEE
T ss_pred ----------ceeHHH--HHHHHhcCCCceEEEEEeC
Confidence 888887 888888777 77777764
No 17
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=99.82 E-value=2.1e-20 Score=155.55 Aligned_cols=112 Identities=26% Similarity=0.487 Sum_probs=97.2
Q ss_pred CCCCceEEecchhhhhhhc-cCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeec
Q psy1110 96 DTESEVVHLTDDNFDLVIQ-EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRN 174 (366)
Q Consensus 96 ~~~~~v~~l~~~~~~~~i~-~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~ 174 (366)
..++.+..|++++|+.++. ++++++|+|||+||++|+.+.|.|+++++.+...
T Consensus 12 ~~~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~~~-------------------------- 65 (127)
T 3h79_A 12 ERPSRVVELTDETFDSIVMDPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQSQK-------------------------- 65 (127)
T ss_dssp -CCCCCEECCTTTHHHHHTCTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHHTS--------------------------
T ss_pred CCCCceEECChhhHHHHHhCCCCCEEEEEECCccHHHHHHhHHHHHHHHHHHhc--------------------------
Confidence 3456899999999999884 6899999999999999999999999999988643
Q ss_pred CCCcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeecccccccc
Q psy1110 175 KNGEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIK 254 (366)
Q Consensus 175 ~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~ 254 (366)
T Consensus 66 -------------------------------------------------------------------------------- 65 (127)
T 3h79_A 66 -------------------------------------------------------------------------------- 65 (127)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCcee--eecCCCCCHHHHHHHHhCC
Q psy1110 255 SINSGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVA--FDAGHLRDASRLVEFMRDP 321 (366)
Q Consensus 255 p~~~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~--~~~~g~~~~e~l~~fi~~~ 321 (366)
....++.++++|++.+..++++|+|+++||+++|++|+.. ..|.|.++.+.|.+||.++
T Consensus 66 --------~~~~~v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~i~~~ 126 (127)
T 3h79_A 66 --------RNHLTFVAARIDGEKYPDVIERMRVSGFPTMRYYTRIDKQEPFEYSGQRYLSLVDSFVFQN 126 (127)
T ss_dssp --------TTTTTEEEEEEETTTCHHHHHHTTCCSSSEEEEECSSCSSSCEECCSCCCHHHHHHHHHHH
T ss_pred --------ccCCCeEEEEEEccccHhHHHhcCCccCCEEEEEeCCCCCCceEecCCccHHHHHHHHHhc
Confidence 0013488999999999999999999999999999988754 6899999999999999764
No 18
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.82 E-value=4.9e-21 Score=178.28 Aligned_cols=176 Identities=14% Similarity=0.143 Sum_probs=134.9
Q ss_pred CCCCchHHHhhcCC-CC------eEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCcC
Q psy1110 11 KEDTSPLAKEIVKP-KA------ITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNPQ 81 (366)
Q Consensus 11 ~~~~~~la~e~~~~-~~------I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~~ 81 (366)
++...++.+++++. .+ |+|+.+||.+ +.++|.++||+ ||+++| +| ...|.|.++.+.+.+|+....
T Consensus 42 c~~~~~~l~ela~~~~~~~~~~~v~~~~vd~d~--~~~~~~~~gv~~~Pt~~i~-~g--~~~~~G~~~~~~l~~fv~~~l 116 (243)
T 2hls_A 42 CEDTLRLMKLFEEESPTRNGGKLLKLNVYYRES--DSDKFSEFKVERVPTVAFL-GG--EVRWTGIPAGEEIRALVEVIM 116 (243)
T ss_dssp HHHHHHHHHHHHHHSCEETTEESEEEEEEETTT--THHHHHHTTCCSSSEEEET-TT--TEEEESCCCTTHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhccCCCCCceeEEEEecCCc--CHHHHHhcCCCcCCEEEEE-CC--ceeEcCCCcHHHHHHHHHHHH
Confidence 44455555665532 22 9999999965 55999999999 999999 55 778989888888999887654
Q ss_pred CcchhhhccCCCcCCCCCceEEecchhhhhhhc-cCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCc
Q psy1110 82 ATSEEVKKKEQDWADTESEVVHLTDDNFDLVIQ-EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHR 160 (366)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i~-~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~ 160 (366)
.... ....++.++++.+.+ .++.+++.|||+||+||+.+.|.|++++..+...
T Consensus 117 ~~~~--------------~~~~l~~~~~~~~~~~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~~~~------------ 170 (243)
T 2hls_A 117 RLSE--------------DESGLEDATKEALKSLKGRVHIETIITPSCPYCPYAVLLAHMFAYEAWKQ------------ 170 (243)
T ss_dssp HHHT--------------TCCCCCHHHHHHHHHCCSCEEEEEEECSSCSSHHHHHHHHHHHHHHHHHT------------
T ss_pred hccC--------------CCCCCCHHHHHHHHHcCCCcEEEEEECCCCCCcHHHHHHHHHHHHHcccc------------
Confidence 3211 111345555655543 3567799999999999999999999999988421
Q ss_pred ccccccceeeeeecCCCcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCC
Q psy1110 161 PQASNVAVVSSLRNKNGEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGR 240 (366)
Q Consensus 161 ~~~~~~~v~~~l~~~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 240 (366)
T Consensus 171 -------------------------------------------------------------------------------- 170 (243)
T 2hls_A 171 -------------------------------------------------------------------------------- 170 (243)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cceeeeccccccccccCCCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhC
Q psy1110 241 GWELRQVGTGKRIKSINSGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRD 320 (366)
Q Consensus 241 ~~~~~~c~~c~~~~p~~~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~ 320 (366)
...++.++.+|++.+..++.+|+|+++||+++ +|+.+ +.|.++.++|++||.+
T Consensus 171 -----------------------~~~~v~~~~vd~~~~~~~~~~~~V~~vPt~~i--~G~~~--~~G~~~~~~l~~~l~~ 223 (243)
T 2hls_A 171 -----------------------GNPVILSEAVEAYENPDIADKYGVMSVPSIAI--NGYLV--FVGVPYEEDFLDYVKS 223 (243)
T ss_dssp -----------------------TCCCEEEEEEETTTCHHHHHHTTCCSSSEEEE--TTEEE--EESCCCHHHHHHHHHH
T ss_pred -----------------------cCCcEEEEEEECccCHHHHHHcCCeeeCeEEE--CCEEE--EeCCCCHHHHHHHHHH
Confidence 00127889999999999999999999999988 88853 8899999999999988
Q ss_pred CCCC
Q psy1110 321 PTEP 324 (366)
Q Consensus 321 ~~~~ 324 (366)
...+
T Consensus 224 ~~~~ 227 (243)
T 2hls_A 224 AAEG 227 (243)
T ss_dssp HHTT
T ss_pred Hhhc
Confidence 7654
No 19
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.82 E-value=4.9e-20 Score=155.05 Aligned_cols=116 Identities=40% Similarity=0.773 Sum_probs=103.6
Q ss_pred CCceEEecchhhhhhhccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCCC
Q psy1110 98 ESEVVHLTDDNFDLVIQEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKNG 177 (366)
Q Consensus 98 ~~~v~~l~~~~~~~~i~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~G 177 (366)
.+.+..|+.++|++++.++++++|+||++||++|+.+.|.|+++++.+.+.
T Consensus 16 ~~~v~~l~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~----------------------------- 66 (140)
T 2dj1_A 16 ENGVWVLNDGNFDNFVADKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKDN----------------------------- 66 (140)
T ss_dssp ETTEEECCTTTHHHHHTTCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHSS-----------------------------
T ss_pred CCCCEEcChHhHHHHHhcCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhcc-----------------------------
Confidence 457999999999999988999999999999999999999999999998765
Q ss_pred cccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccC
Q psy1110 178 EPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSIN 257 (366)
Q Consensus 178 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~ 257 (366)
T Consensus 67 -------------------------------------------------------------------------------- 66 (140)
T 2dj1_A 67 -------------------------------------------------------------------------------- 66 (140)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCCCCCCCCCC
Q psy1110 258 SGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPTEPPPPPPP 330 (366)
Q Consensus 258 ~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~~~~~~~~~ 330 (366)
..++.++.+|++.+..++.+|+|+++||+++|++|+ +.++.|.++.+.|.+||++.+.+...++|
T Consensus 67 -------~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~-~~~~~g~~~~~~l~~~l~~~~~~~~~~~~ 131 (140)
T 2dj1_A 67 -------DPPIAVAKIDATSASMLASKFDVSGYPTIKILKKGQ-AVDYDGSRTQEEIVAKVREVSQPDWTPPP 131 (140)
T ss_dssp -------SSCCEEEEECTTTCHHHHHHTTCCSSSEEEEEETTE-EEECCSCCCHHHHHHHHHHHHSSSCCCCS
T ss_pred -------CCceEEEEEeCcccHHHHHHCCCCccCeEEEEECCc-EEEcCCCCCHHHHHHHHHHhcCCCCCCCC
Confidence 123788999999999999999999999999999999 88999999999999999998876654443
No 20
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=99.82 E-value=1.7e-20 Score=152.75 Aligned_cols=99 Identities=23% Similarity=0.518 Sum_probs=86.8
Q ss_pred EEec-chhhhhhhc--cCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCCCc
Q psy1110 102 VHLT-DDNFDLVIQ--EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKNGE 178 (366)
Q Consensus 102 ~~l~-~~~~~~~i~--~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~G~ 178 (366)
..++ .++|++.+. ++++++|+|||+||+||+.+.|.|+++++.+.+
T Consensus 3 ~~i~~~~~f~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~~------------------------------- 51 (105)
T 3zzx_A 3 YQVKDQEDFTKQLNEAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMSD------------------------------- 51 (105)
T ss_dssp EECCSHHHHHHHHHHTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-------------------------------
T ss_pred EEeCCHHHHHHHHHhcCCCEEEEEEECCCCCCccCCCcchhhhhhccCC-------------------------------
Confidence 3454 478998884 378999999999999999999999999987643
Q ss_pred ccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccCC
Q psy1110 179 PTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSINS 258 (366)
Q Consensus 179 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~~ 258 (366)
T Consensus 52 -------------------------------------------------------------------------------- 51 (105)
T 3zzx_A 52 -------------------------------------------------------------------------------- 51 (105)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCC
Q psy1110 259 GSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDP 321 (366)
Q Consensus 259 ~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~ 321 (366)
+.++++|++++.+++++|+|+++||+++|++|+.+.++.| ++.++|.+||+++
T Consensus 52 ---------~~~~~vd~d~~~~l~~~~~V~~~PT~~~~~~G~~v~~~~G-~~~~~l~~~i~k~ 104 (105)
T 3zzx_A 52 ---------VVFLKVDVDECEDIAQDNQIACMPTFLFMKNGQKLDSLSG-ANYDKLLELVEKN 104 (105)
T ss_dssp ---------EEEEEEETTTCHHHHHHTTCCBSSEEEEEETTEEEEEEES-CCHHHHHHHHHHH
T ss_pred ---------eEEEEEecccCHHHHHHcCCCeecEEEEEECCEEEEEEeC-cCHHHHHHHHHhc
Confidence 5688899999999999999999999999999999999999 5899999999753
No 21
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=99.81 E-value=5.5e-20 Score=149.35 Aligned_cols=113 Identities=39% Similarity=0.746 Sum_probs=101.4
Q ss_pred CCCceEEecchhhhhhhccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCC
Q psy1110 97 TESEVVHLTDDNFDLVIQEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKN 176 (366)
Q Consensus 97 ~~~~v~~l~~~~~~~~i~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~ 176 (366)
.++.+..|+.++|++++.++++++|.||++||++|+.+.|.|+++++.+...
T Consensus 5 ~~~~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~---------------------------- 56 (120)
T 1mek_A 5 EEDHVLVLRKSNFAEALAAHKYLLVEFYAPWCGHCKALAPEYAKAAGKLKAE---------------------------- 56 (120)
T ss_dssp EETTEEECCTTTHHHHHHHCSEEEEEEECSSCSTTSTTHHHHHHHHHTTTTT----------------------------
T ss_pred CCCCcEEechhhHHHHHccCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhcc----------------------------
Confidence 3467999999999999988999999999999999999999999999887653
Q ss_pred CcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeecccccccccc
Q psy1110 177 GEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSI 256 (366)
Q Consensus 177 G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~ 256 (366)
T Consensus 57 -------------------------------------------------------------------------------- 56 (120)
T 1mek_A 57 -------------------------------------------------------------------------------- 56 (120)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCcee--eecCCCCCHHHHHHHHhCCCCCC
Q psy1110 257 NSGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVA--FDAGHLRDASRLVEFMRDPTEPP 325 (366)
Q Consensus 257 ~~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~--~~~~g~~~~e~l~~fi~~~~~~~ 325 (366)
..++.++.+|++.+..++.+|+|+++||+++|++|+.+ .++.|.++.+.|.+||++.++++
T Consensus 57 --------~~~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~~~g~~~~~~l~~~l~~~~~~~ 119 (120)
T 1mek_A 57 --------GSEIRLAKVDATEESDLAQQYGVRGYPTIKFFRNGDTASPKEYTAGREADDIVNWLKKRTGPA 119 (120)
T ss_dssp --------CCCCBCEEEETTTCCSSHHHHTCCSSSEEEEEESSCSSSCEECCCCSSHHHHHHHHHTTSCCC
T ss_pred --------CCcEEEEEEcCCCCHHHHHHCCCCcccEEEEEeCCCcCCcccccCccCHHHHHHHHHhccCCC
Confidence 12377889999999999999999999999999999977 89999999999999999988754
No 22
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=99.81 E-value=1.4e-19 Score=147.22 Aligned_cols=106 Identities=25% Similarity=0.450 Sum_probs=97.5
Q ss_pred eEEecchhhhhhhccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCCCccc
Q psy1110 101 VVHLTDDNFDLVIQEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKNGEPT 180 (366)
Q Consensus 101 v~~l~~~~~~~~i~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~G~~~ 180 (366)
+..|++++|++.+ ++++++|.||++||++|+.+.|.++++++.+.++
T Consensus 3 v~~l~~~~~~~~~-~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~-------------------------------- 49 (112)
T 2voc_A 3 IVKATDQSFSAET-SEGVVLADFWAPWCGPSKMIAPVLEELDQEMGDK-------------------------------- 49 (112)
T ss_dssp CEECCTTTHHHHH-SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHTTT--------------------------------
T ss_pred eEEecHHHHHHHh-CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCC--------------------------------
Confidence 6789999999988 8899999999999999999999999999998766
Q ss_pred ccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccCCCC
Q psy1110 181 THPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSINSGS 260 (366)
Q Consensus 181 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~~~~ 260 (366)
T Consensus 50 -------------------------------------------------------------------------------- 49 (112)
T 2voc_A 50 -------------------------------------------------------------------------------- 49 (112)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCCCCCC
Q psy1110 261 FSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPTEPPP 326 (366)
Q Consensus 261 ~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~~~~~ 326 (366)
+.++.+|++.+..++++|+|+++||+++|++|+.+.++.|.++.+.|.+|+.++..+..
T Consensus 50 -------v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~~~~~~ 108 (112)
T 2voc_A 50 -------LKIVKIDVDENQETAGKYGVMSIPTLLVLKDGEVVETSVGFKPKEALQELVNKHLLEHH 108 (112)
T ss_dssp -------CEEEEEETTTCCSHHHHTTCCSBSEEEEEETTEEEEEEESCCCHHHHHHHHHTTSCSCC
T ss_pred -------cEEEEEECCCCHHHHHHcCCCcccEEEEEeCCEEEEEEeCCCCHHHHHHHHHHHHHhhc
Confidence 67788888888889999999999999999999999999999999999999999987663
No 23
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=99.81 E-value=5.9e-19 Score=171.87 Aligned_cols=190 Identities=14% Similarity=0.213 Sum_probs=155.3
Q ss_pred chHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCcCCcchhhhccCC
Q psy1110 15 SPLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNPQATSEEVKKKEQ 92 (366)
Q Consensus 15 ~~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~~~~~~~~~~~~~ 92 (366)
..+|+++... +|.+++|||+. ..++|.++||+ ||+.+|++|. ...|.|.|+.++|++|+.+...+
T Consensus 57 ~~~a~~~~~~-~v~~~~Vd~~~--~~~l~~~~~v~~~Pt~~~~~~g~-~~~~~G~~~~~~l~~~i~~~~~~--------- 123 (350)
T 1sji_A 57 ELVAQVLEHK-DIGFVMVDAKK--EAKLAKKLGFDEEGSLYVLKGDR-TIEFDGEFAADVLVEFLLDLIED--------- 123 (350)
T ss_dssp HHHHHHGGGS-SEEEEEEETTT--THHHHHHHTCCSTTEEEEEETTE-EEEECSCCCHHHHHHHHHTTSSC---------
T ss_pred HHHHHHHhhc-CcEEEEEeCCC--CHHHHHhcCCCccceEEEEECCc-EEEecCCCCHHHHHHHHHHhcCC---------
Confidence 4677787732 79999999966 45999999999 9999999887 67999999999999999987765
Q ss_pred CcCCCCCceEEec-chhhhhhhc-cCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceee
Q psy1110 93 DWADTESEVVHLT-DDNFDLVIQ-EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVS 170 (366)
Q Consensus 93 ~~~~~~~~v~~l~-~~~~~~~i~-~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~ 170 (366)
.+..|+ .++++.+++ +++.++|.||++||.. ..+.|.++|..+.+.
T Consensus 124 -------~~~~l~~~~~~~~~~~~~~~~~vv~ff~~~~~~---~~~~~~~~A~~~~~~---------------------- 171 (350)
T 1sji_A 124 -------PVEIINSKLEVQAFERIEDQIKLIGFFKSEESE---YYKAFEEAAEHFQPY---------------------- 171 (350)
T ss_dssp -------SEEECCSHHHHHHHHHCCSSCEEEEECSCTTSH---HHHHHHHHHHHTTTT----------------------
T ss_pred -------cceeccchHHHHHHhccCCCcEEEEEECCCCcH---HHHHHHHHHHhhccC----------------------
Confidence 577785 578999887 7788999999998754 568999999988766
Q ss_pred eeecCCCcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeecccc
Q psy1110 171 SLRNKNGEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTG 250 (366)
Q Consensus 171 ~l~~~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c 250 (366)
T Consensus 172 -------------------------------------------------------------------------------- 171 (350)
T 1sji_A 172 -------------------------------------------------------------------------------- 171 (350)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccCCCCCCCCccceeEEEEecccccccccccccccCCeEEEecCC-ceeeecCCC-CCHHHHHHHHhCCCCCCCCC
Q psy1110 251 KRIKSINSGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAG-SVAFDAGHL-RDASRLVEFMRDPTEPPPPP 328 (366)
Q Consensus 251 ~~~~p~~~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G-~~~~~~~g~-~~~e~l~~fi~~~~~~~~~~ 328 (366)
+.|+.+ .+..++++++|+ +|++++|+.+ .....|.|. ++.++|.+||.++..|.
T Consensus 172 -----------------~~f~~~---~~~~~~~~~~v~-~p~i~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~--- 227 (350)
T 1sji_A 172 -----------------IKFFAT---FDKGVAKKLSLK-MNEVDFYEPFMDEPIAIPDKPYTEEELVEFVKEHQRPT--- 227 (350)
T ss_dssp -----------------SEEEEE---CCHHHHHHHTCC-TTCEEEECTTCSSCEECSSSSCCHHHHHHHHHHHCCCS---
T ss_pred -----------------cEEEEE---CCHHHHHHcCCC-CCcEEEEeCCCCCceecCCCCCCHHHHHHHHHHcCccc---
Confidence 445554 345688999999 9999999863 445678886 99999999999999888
Q ss_pred CCCCCCCCCCCeeEEechhcHHHHhhcc--CceEEEEec
Q psy1110 329 PPEPAWAEEPSEVYHLGADNFASTLRKK--KHALVMFYA 365 (366)
Q Consensus 329 ~~~~~~~~~~~~v~~lt~~~~~~~~~~~--~~~~v~fy~ 365 (366)
|.++|.+++..++... ...++.|+.
T Consensus 228 ------------v~elt~~~~~~~~~~~~~~~~~l~f~~ 254 (350)
T 1sji_A 228 ------------LRRLRPEDMFETWEDDLNGIHIVAFAE 254 (350)
T ss_dssp ------------EEECCTTTHHHHHHSCSSSEEEEEECC
T ss_pred ------------hhhcChhhHHHHhcCCCCCcEEEEEEc
Confidence 9999999999988652 334555664
No 24
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=99.80 E-value=5.8e-19 Score=173.55 Aligned_cols=190 Identities=15% Similarity=0.223 Sum_probs=154.9
Q ss_pred chHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCcCCcchhhhccCC
Q psy1110 15 SPLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNPQATSEEVKKKEQ 92 (366)
Q Consensus 15 ~~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~~~~~~~~~~~~~ 92 (366)
..+|+++. ..+|.+++|||.+ +.++|.++||+ ||+++|++|.. ..|.|.|+.++|++|+.+...+
T Consensus 59 e~~a~~~~-~~~v~~~~Vd~~~--~~~l~~~~~V~~~PTl~~f~~G~~-~~y~G~~~~~~i~~~i~~~~~~--------- 125 (367)
T 3us3_A 59 ELAAQVLE-DKGVGFGLVDSEK--DAAVAKKLGLTEEDSIYVFKEDEV-IEYDGEFSADTLVEFLLDVLED--------- 125 (367)
T ss_dssp HHHHHHHT-TTTEEEEEEETTT--THHHHHHHTCCSTTEEEEEETTEE-EECCSCCSHHHHHHHHHHHHSC---------
T ss_pred HHHHHHhh-cCCceEEEEeCcc--cHHHHHHcCCCcCceEEEEECCcE-EEeCCCCCHHHHHHHHHHhcCC---------
Confidence 45677776 2369999999966 55999999999 99999998864 6999999999999999887664
Q ss_pred CcCCCCCceEEec-chhhhhhhc-cCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceee
Q psy1110 93 DWADTESEVVHLT-DDNFDLVIQ-EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVS 170 (366)
Q Consensus 93 ~~~~~~~~v~~l~-~~~~~~~i~-~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~ 170 (366)
.+..++ .++++.+++ ++..++|.||++||+ ...+.|.++|..+.+.
T Consensus 126 -------~v~~i~~~~~~~~~~~~~~~~~vv~ff~~~~~---~~~~~f~~~A~~~~~~---------------------- 173 (367)
T 3us3_A 126 -------PVELIEGERELQAFENIEDEIKLIGYFKNKDS---EHYKAFKEAAEEFHPY---------------------- 173 (367)
T ss_dssp -------SEEECCSHHHHHHHHHCCSSCEEEEECSCTTC---HHHHHHHHHHHHHTTT----------------------
T ss_pred -------CcEEcCCHHHHHHHhccCCCcEEEEEECCCCc---hHHHHHHHHHHhhcCC----------------------
Confidence 577785 488999998 678899999999876 5678999999999776
Q ss_pred eeecCCCcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeecccc
Q psy1110 171 SLRNKNGEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTG 250 (366)
Q Consensus 171 ~l~~~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c 250 (366)
T Consensus 174 -------------------------------------------------------------------------------- 173 (367)
T 3us3_A 174 -------------------------------------------------------------------------------- 173 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccCCCCCCCCccceeEEEEecccccccccccccccCCeEEEecCC-ceeeecCC-CCCHHHHHHHHhCCCCCCCCC
Q psy1110 251 KRIKSINSGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAG-SVAFDAGH-LRDASRLVEFMRDPTEPPPPP 328 (366)
Q Consensus 251 ~~~~p~~~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G-~~~~~~~g-~~~~e~l~~fi~~~~~~~~~~ 328 (366)
+.|+.+. +..++++|+|++ |+|++|+.+ .....|.| .++.++|.+||..+..|.
T Consensus 174 -----------------~~F~~~~---~~~~~~~~~v~~-p~i~lf~~~~~~~~~y~g~~~~~~~l~~fi~~~~~p~--- 229 (367)
T 3us3_A 174 -----------------IPFFATF---DSKVAKKLTLKL-NEIDFYEAFMEEPVTIPDKPNSEEEIVNFVEEHRRST--- 229 (367)
T ss_dssp -----------------SCEEEEC---CHHHHHHHTCCT-TCEEEECTTCSSCEECSSSSCCHHHHHHHHHHTCSCS---
T ss_pred -----------------cEEEEEC---CHHHHHHcCCCC-CeEEEEcCCCCCCeecCCCCCCHHHHHHHHHHcCccc---
Confidence 3455443 346788999985 999999874 33567788 499999999999999988
Q ss_pred CCCCCCCCCCCeeEEechhcHHHHhhc--cCceEEEEec
Q psy1110 329 PPEPAWAEEPSEVYHLGADNFASTLRK--KKHALVMFYA 365 (366)
Q Consensus 329 ~~~~~~~~~~~~v~~lt~~~~~~~~~~--~~~~~v~fy~ 365 (366)
|.++|.+++..++.. +.+.+++||.
T Consensus 230 ------------v~elt~~~~~~~~~~~~~~~~~~~f~~ 256 (367)
T 3us3_A 230 ------------LRKLKPESMYETWEDDMDGIHIVAFAE 256 (367)
T ss_dssp ------------EEECCGGGHHHHHHSCBTTEEEEEECC
T ss_pred ------------eeecChhhHHHHHhhccCCcEEEEEEc
Confidence 999999999888764 3456677774
No 25
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.80 E-value=7.5e-20 Score=152.15 Aligned_cols=113 Identities=42% Similarity=0.691 Sum_probs=99.1
Q ss_pred CCceEEecchhhhhhh-ccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCC
Q psy1110 98 ESEVVHLTDDNFDLVI-QEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKN 176 (366)
Q Consensus 98 ~~~v~~l~~~~~~~~i-~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~ 176 (366)
.+.+..|++++|++.+ +++++++|+||++||++|+.+.|.|+++++.+...
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~---------------------------- 57 (133)
T 1x5d_A 6 SGDVIELTDDSFDKNVLDSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVKEQ---------------------------- 57 (133)
T ss_dssp CCSCEECCTTHHHHHTTTSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHHHH----------------------------
T ss_pred CCcCEEcCHhhHHHHHhcCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHHhh----------------------------
Confidence 4578999999999866 67899999999999999999999999999998732
Q ss_pred CcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeecccccccccc
Q psy1110 177 GEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSI 256 (366)
Q Consensus 177 G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~ 256 (366)
T Consensus 58 -------------------------------------------------------------------------------- 57 (133)
T 1x5d_A 58 -------------------------------------------------------------------------------- 57 (133)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCCCCC
Q psy1110 257 NSGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPTEPP 325 (366)
Q Consensus 257 ~~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~~~~ 325 (366)
...++.++.+|++.+..++.+|+|+++||+++|++|+.+.++.|.++.+.|.+||.+.....
T Consensus 58 -------~~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~~~~~~G~~~~~~l~~~l~~~~~~~ 119 (133)
T 1x5d_A 58 -------TKGKVKLAAVDATVNQVLASRYGIRGFPTIKIFQKGESPVDYDGGRTRSDIVSRALDLFSDN 119 (133)
T ss_dssp -------TTTSEEEEEEETTTCCHHHHHHTCCSSSEEEEEETTEEEEEECSCCSHHHHHHHHHHHHHHH
T ss_pred -------cCCcEEEEEEECCCCHHHHHhCCCCeeCeEEEEeCCCceEEecCCCCHHHHHHHHHHHhhcc
Confidence 00127889999999999999999999999999999998999999999999999999876543
No 26
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=99.79 E-value=2.1e-19 Score=144.53 Aligned_cols=105 Identities=28% Similarity=0.439 Sum_probs=96.3
Q ss_pred CceEEecchhhhhhh-ccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCCC
Q psy1110 99 SEVVHLTDDNFDLVI-QEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKNG 177 (366)
Q Consensus 99 ~~v~~l~~~~~~~~i-~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~G 177 (366)
..+..|+.++|+..+ +++++++|.||++||++|+.+.|.++++++.+.++
T Consensus 4 ~~v~~l~~~~~~~~~~~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~~~----------------------------- 54 (111)
T 3gnj_A 4 MSLEKLDTNTFEQLIYDEGKACLVMFSRKNCHVCQKVTPVLEELRLNYEES----------------------------- 54 (111)
T ss_dssp CCSEECCHHHHHHHHTTSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTTTT-----------------------------
T ss_pred CcceecCHHHHHHHHHhcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcCCc-----------------------------
Confidence 468899999999988 77899999999999999999999999999998765
Q ss_pred cccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccC
Q psy1110 178 EPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSIN 257 (366)
Q Consensus 178 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~ 257 (366)
T Consensus 55 -------------------------------------------------------------------------------- 54 (111)
T 3gnj_A 55 -------------------------------------------------------------------------------- 54 (111)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCC
Q psy1110 258 SGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPT 322 (366)
Q Consensus 258 ~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~ 322 (366)
+.++.+|++.+..++.+|+|+++||+++|++|+.+.++.|.++.+.|.+||++..
T Consensus 55 ----------v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~l~~~l 109 (111)
T 3gnj_A 55 ----------FGFYYVDVEEEKTLFQRFSLKGVPQILYFKDGEYKGKMAGDVEDDEVEQMIADVL 109 (111)
T ss_dssp ----------SEEEEEETTTCHHHHHHTTCCSSCEEEEEETTEEEEEEESSCCHHHHHHHHHHHH
T ss_pred ----------eEEEEEECCcChhHHHhcCCCcCCEEEEEECCEEEEEEeccCCHHHHHHHHHHHh
Confidence 6788888988999999999999999999999999999999999999999997643
No 27
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.79 E-value=1.9e-19 Score=143.97 Aligned_cols=105 Identities=24% Similarity=0.451 Sum_probs=97.1
Q ss_pred CceEEecchhhhhhhccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCCCc
Q psy1110 99 SEVVHLTDDNFDLVIQEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKNGE 178 (366)
Q Consensus 99 ~~v~~l~~~~~~~~i~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~G~ 178 (366)
+.+..+++++|+.++.++++++|+||++||++|+.+.|.++++++.+.+.
T Consensus 4 ~~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~------------------------------ 53 (109)
T 3tco_A 4 DVTLVLTEENFDEVIRNNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYKGK------------------------------ 53 (109)
T ss_dssp CCCEECCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT------------------------------
T ss_pred CeEEEecHHHHHHHHhcCCeEEEEEECCCCHHHHhhhHHHHHHHHHhCCC------------------------------
Confidence 47889999999999988999999999999999999999999999998766
Q ss_pred ccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccCC
Q psy1110 179 PTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSINS 258 (366)
Q Consensus 179 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~~ 258 (366)
T Consensus 54 -------------------------------------------------------------------------------- 53 (109)
T 3tco_A 54 -------------------------------------------------------------------------------- 53 (109)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCC
Q psy1110 259 GSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPT 322 (366)
Q Consensus 259 ~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~ 322 (366)
+.++.+|++.+..++.+|+|+++||+++|++|+.+.++.|.++.+.|.+||++++
T Consensus 54 ---------~~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~l~~~l 108 (109)
T 3tco_A 54 ---------AVFGRLNVDENQKIADKYSVLNIPTTLIFVNGQLVDSLVGAVDEDTLESTVNKYL 108 (109)
T ss_dssp ---------SEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHC
T ss_pred ---------ceEEEEccccCHHHHHhcCcccCCEEEEEcCCcEEEeeeccCCHHHHHHHHHHHh
Confidence 6788888888999999999999999999999999999999999999999998654
No 28
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=99.79 E-value=3.9e-19 Score=141.80 Aligned_cols=103 Identities=30% Similarity=0.504 Sum_probs=94.6
Q ss_pred eEEecchhhhhhhccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCCCccc
Q psy1110 101 VVHLTDDNFDLVIQEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKNGEPT 180 (366)
Q Consensus 101 v~~l~~~~~~~~i~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~G~~~ 180 (366)
+..|++++|+.+++++++++|.||++||++|+.+.|.++++++.+.+.
T Consensus 2 v~~l~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~-------------------------------- 49 (105)
T 1nsw_A 2 TMTLTDANFQQAIQGDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHADK-------------------------------- 49 (105)
T ss_dssp CEEECTTTHHHHHSSSSCEEEEEECTTCHHHHHHHHHHHHHHHHSTTT--------------------------------
T ss_pred ceeccHHhHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCC--------------------------------
Confidence 678999999988888999999999999999999999999999988665
Q ss_pred ccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccCCCC
Q psy1110 181 THPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSINSGS 260 (366)
Q Consensus 181 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~~~~ 260 (366)
T Consensus 50 -------------------------------------------------------------------------------- 49 (105)
T 1nsw_A 50 -------------------------------------------------------------------------------- 49 (105)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCC
Q psy1110 261 FSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPT 322 (366)
Q Consensus 261 ~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~ 322 (366)
+.++.+|++.+..++++|+|+++||+++|++|+.+.++.|.++.+.|.+||++.+
T Consensus 50 -------v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 104 (105)
T 1nsw_A 50 -------VTVAKLNVDENPETTSQFGIMSIPTLILFKGGRPVKQLIGYQPKEQLEAQLADVL 104 (105)
T ss_dssp -------CEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHTTTTT
T ss_pred -------cEEEEEECcCCHHHHHHcCCccccEEEEEeCCeEEEEEecCCCHHHHHHHHHHHh
Confidence 6778888888889999999999999999999999999999999999999998764
No 29
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=99.79 E-value=4.4e-19 Score=141.28 Aligned_cols=103 Identities=28% Similarity=0.477 Sum_probs=95.4
Q ss_pred ceEEecchhhhhhhccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCCCcc
Q psy1110 100 EVVHLTDDNFDLVIQEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKNGEP 179 (366)
Q Consensus 100 ~v~~l~~~~~~~~i~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~G~~ 179 (366)
.+..+++++|++.+ ++++++|+||++||++|+.+.|.++++++.+.+.
T Consensus 4 ~v~~l~~~~~~~~~-~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~------------------------------- 51 (106)
T 3die_A 4 AIVKVTDADFDSKV-ESGVQLVDFWATACGPCKMIAPVLEELAADYEGK------------------------------- 51 (106)
T ss_dssp CCEECCTTTHHHHS-CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTTTT-------------------------------
T ss_pred ceEECCHHHHHHHh-cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhcCC-------------------------------
Confidence 58899999999988 8899999999999999999999999999998766
Q ss_pred cccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccCCC
Q psy1110 180 TTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSINSG 259 (366)
Q Consensus 180 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~~~ 259 (366)
T Consensus 52 -------------------------------------------------------------------------------- 51 (106)
T 3die_A 52 -------------------------------------------------------------------------------- 51 (106)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCC
Q psy1110 260 SFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPT 322 (366)
Q Consensus 260 ~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~ 322 (366)
+.++.+|++.+..++++|+|+++||+++|++|+.+.++.|.++.+.|.+||++++
T Consensus 52 --------~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~g~~~~~~l~~~l~~~l 106 (106)
T 3die_A 52 --------ADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL 106 (106)
T ss_dssp --------CEEEEEETTTCHHHHHHTTCCSBSEEEEEETTEEEEEEESCCCHHHHHHHHHTTC
T ss_pred --------cEEEEEECCcCHHHHHhCCCcccCEEEEEeCCeEEEEEeCCCCHHHHHHHHHHhC
Confidence 6788888888889999999999999999999999999999999999999998753
No 30
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=99.78 E-value=1.9e-19 Score=144.57 Aligned_cols=107 Identities=36% Similarity=0.662 Sum_probs=95.7
Q ss_pred CCceEEecchhhhhhhccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCCC
Q psy1110 98 ESEVVHLTDDNFDLVIQEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKNG 177 (366)
Q Consensus 98 ~~~v~~l~~~~~~~~i~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~G 177 (366)
.+.+..|++++|++.+. +++++|+||++||++|+.+.|.|+++++.+...
T Consensus 4 ~~~v~~l~~~~~~~~~~-~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~----------------------------- 53 (111)
T 3uvt_A 4 GSTVLALTENNFDDTIA-EGITFIKFYAPWCGHCKTLAPTWEELSKKEFPG----------------------------- 53 (111)
T ss_dssp -CCSEECCTTTHHHHHH-SSEEEEEEECSSCHHHHHHHHHHHHHHTCCCCC-----------------------------
T ss_pred CCcceEcChhhHHHHhc-CCcEEEEEECCCChhHHHhhHHHHHHHHHhhcc-----------------------------
Confidence 35789999999999988 789999999999999999999999998876433
Q ss_pred cccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccC
Q psy1110 178 EPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSIN 257 (366)
Q Consensus 178 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~ 257 (366)
T Consensus 54 -------------------------------------------------------------------------------- 53 (111)
T 3uvt_A 54 -------------------------------------------------------------------------------- 53 (111)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCC
Q psy1110 258 SGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDP 321 (366)
Q Consensus 258 ~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~ 321 (366)
..++.++.+|++.+..++++|+|+++||+++|++|+.+.++.|.++.+.|.+||+++
T Consensus 54 -------~~~~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 54 -------LAGVKIAEVDCTAERNICSKYSVRGYPTLLLFRGGKKVSEHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp --------CCEEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEECSCCSHHHHHHHHHHH
T ss_pred -------CCceEEEEEeccccHhHHHhcCCCcccEEEEEeCCcEEEeccCCcCHHHHHHHHHhc
Confidence 123889999999999999999999999999999999999999999999999999753
No 31
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=99.78 E-value=5.6e-20 Score=157.50 Aligned_cols=109 Identities=17% Similarity=0.208 Sum_probs=96.8
Q ss_pred ceEEecchhhhhhhccCCeEEEEEECCC--ChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCCC
Q psy1110 100 EVVHLTDDNFDLVIQEESSVLVMFYAPW--CGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKNG 177 (366)
Q Consensus 100 ~v~~l~~~~~~~~i~~~k~vlV~F~a~w--C~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~G 177 (366)
++..+++++|++.+.++++++|+|||+| |++|+.+.|.+++++++|.++
T Consensus 18 g~~~~t~~~F~~~v~~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g~----------------------------- 68 (140)
T 2qgv_A 18 GWTPVSESRLDDWLTQAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPDY----------------------------- 68 (140)
T ss_dssp TCEECCHHHHHHHHHTCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTTS-----------------------------
T ss_pred CCccCCHHHHHHHHhCCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCCC-----------------------------
Confidence 5779999999998888889999999999 999999999999999988654
Q ss_pred cccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccC
Q psy1110 178 EPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSIN 257 (366)
Q Consensus 178 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~ 257 (366)
T Consensus 69 -------------------------------------------------------------------------------- 68 (140)
T 2qgv_A 69 -------------------------------------------------------------------------------- 68 (140)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCCCCCC
Q psy1110 258 SGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPTEPPP 326 (366)
Q Consensus 258 ~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~~~~~ 326 (366)
.++++++|.+++.+++.+|+|+++|||++|++|+.+.+..|.++.+.|.+||++.+..++
T Consensus 69 ---------~v~~~KVdvDe~~~lA~~ygV~sIPTlilFk~G~~v~~~~G~~~k~~l~~~i~~~l~~~~ 128 (140)
T 2qgv_A 69 ---------TWQVAIADLEQSEAIGDRFGAFRFPATLVFTGGNYRGVLNGIHPWAELINLMRGLVEPQQ 128 (140)
T ss_dssp ---------CCEEEECCHHHHHHHHHHHTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHHC---
T ss_pred ---------eEEEEEEECCCCHHHHHHcCCccCCEEEEEECCEEEEEEecCCCHHHHHHHHHHHhcCCC
Confidence 056888888889999999999999999999999999999999999999999988775443
No 32
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=99.78 E-value=2.4e-19 Score=153.04 Aligned_cols=105 Identities=15% Similarity=0.146 Sum_probs=95.8
Q ss_pred CceEEecchhhhhhhccCC-eEEEEEECCCC--hhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecC
Q psy1110 99 SEVVHLTDDNFDLVIQEES-SVLVMFYAPWC--GHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNK 175 (366)
Q Consensus 99 ~~v~~l~~~~~~~~i~~~k-~vlV~F~a~wC--~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~ 175 (366)
.+...+++++|++.+.+++ +++|+|||+|| ++|+.+.|.++++++.|.++
T Consensus 15 ~g~~~vt~~~F~~~v~~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~~~--------------------------- 67 (137)
T 2qsi_A 15 NAPTLVDEATVDDFIAHSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFPGR--------------------------- 67 (137)
T ss_dssp --CEEECTTTHHHHHHTSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTSTTT---------------------------
T ss_pred cCCcccCHhHHHHHHhcCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHccCC---------------------------
Confidence 4667999999999886554 99999999999 99999999999999999776
Q ss_pred CCcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccc
Q psy1110 176 NGEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKS 255 (366)
Q Consensus 176 ~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p 255 (366)
T Consensus 68 -------------------------------------------------------------------------------- 67 (137)
T 2qsi_A 68 -------------------------------------------------------------------------------- 67 (137)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCC
Q psy1110 256 INSGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPT 322 (366)
Q Consensus 256 ~~~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~ 322 (366)
+.++++|.+++..++.+|+|+++|||++||+|+.+.+..|.++.+.|.++|++++
T Consensus 68 ------------v~~~KVdvDe~~~la~~ygV~siPTlilFkdG~~v~~~vG~~~k~~l~~~l~~~l 122 (137)
T 2qsi_A 68 ------------LVAAEVAAEAERGLMARFGVAVCPSLAVVQPERTLGVIAKIQDWSSYLAQIGAML 122 (137)
T ss_dssp ------------EEEEEECGGGHHHHHHHHTCCSSSEEEEEECCEEEEEEESCCCHHHHHHHHHHHH
T ss_pred ------------cEEEEEECCCCHHHHHHcCCccCCEEEEEECCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 7899999999999999999999999999999999999999999999999998766
No 33
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=99.78 E-value=6.2e-19 Score=140.67 Aligned_cols=105 Identities=24% Similarity=0.425 Sum_probs=96.5
Q ss_pred ceEEecchhhhhhhccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCCCcc
Q psy1110 100 EVVHLTDDNFDLVIQEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKNGEP 179 (366)
Q Consensus 100 ~v~~l~~~~~~~~i~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~G~~ 179 (366)
.+..|++++|+.+++++++++|+||++||++|+.+.|.++++++.+.++
T Consensus 2 ~v~~l~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~------------------------------- 50 (109)
T 2yzu_A 2 KPIEVTDQNFDETLGQHPLVLVDFWAEWCAPCRMIAPILEEIAKEYEGK------------------------------- 50 (109)
T ss_dssp CCEECCTTTHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHTBTT-------------------------------
T ss_pred cceEccHhHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhhCc-------------------------------
Confidence 5789999999998988999999999999999999999999999988655
Q ss_pred cccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccCCC
Q psy1110 180 TTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSINSG 259 (366)
Q Consensus 180 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~~~ 259 (366)
T Consensus 51 -------------------------------------------------------------------------------- 50 (109)
T 2yzu_A 51 -------------------------------------------------------------------------------- 50 (109)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCCC
Q psy1110 260 SFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPTE 323 (366)
Q Consensus 260 ~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~~ 323 (366)
+.++.+|++.+..++++|+|+++||+++|++|+.+.++.|..+.+.|.+|+++.+.
T Consensus 51 --------~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~l~~~l~ 106 (109)
T 2yzu_A 51 --------LLVAKLDVDENPKTAMRYRVMSIPTVILFKDGQPVEVLVGAQPKRNYQAKIEKHLP 106 (109)
T ss_dssp --------BEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHTTC-
T ss_pred --------eEEEEEECCCCHhHHHhCCCCcCCEEEEEeCCcEeeeEeCCCCHHHHHHHHHHHhh
Confidence 67888888888899999999999999999999999999999999999999998875
No 34
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.78 E-value=7.7e-19 Score=145.41 Aligned_cols=115 Identities=29% Similarity=0.515 Sum_probs=98.7
Q ss_pred CCceEEecchhhhhhhccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCCC
Q psy1110 98 ESEVVHLTDDNFDLVIQEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKNG 177 (366)
Q Consensus 98 ~~~v~~l~~~~~~~~i~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~G 177 (366)
.+.+..|++++|++++++ +++|+||++||++|+.+.|.|+++++.+.+.
T Consensus 6 ~~~v~~l~~~~f~~~~~~--~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~----------------------------- 54 (126)
T 1x5e_A 6 SGNVRVITDENWRELLEG--DWMIEFYAPWCPACQNLQPEWESFAEWGEDL----------------------------- 54 (126)
T ss_dssp CCSEEECCTTTHHHHTSS--EEEEEEECSSCHHHHHHHHHHHHHHHHHGGG-----------------------------
T ss_pred CCccEEecHHHHHHHhCC--CEEEEEECCCCHHHHHHhHHHHHHHHHhccC-----------------------------
Confidence 457999999999998864 4999999999999999999999999988752
Q ss_pred cccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccC
Q psy1110 178 EPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSIN 257 (366)
Q Consensus 178 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~ 257 (366)
T Consensus 55 -------------------------------------------------------------------------------- 54 (126)
T 1x5e_A 55 -------------------------------------------------------------------------------- 54 (126)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCCCCCCCCCCCCCCC
Q psy1110 258 SGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPTEPPPPPPPEPAWA 335 (366)
Q Consensus 258 ~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~~~~~~~~~~~~~~ 335 (366)
++.++.+|++.+..++++|+|+++||+++|++|+ +.++.|.++.+.|.+||++...+.. .|-+.|.
T Consensus 55 ---------~v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~-~~~~~G~~~~~~l~~~l~~~~~~~~--~~~~~~~ 120 (126)
T 1x5e_A 55 ---------EVNIAKVDVTEQPGLSGRFIINALPTIYHCKDGE-FRRYQGPRTKKDFINFISDKEWKSI--EPVSSWF 120 (126)
T ss_dssp ---------TCEEEEEETTTCHHHHHHTTCCSSSEEEEEETTE-EEECCSCCCHHHHHHHHHTCGGGGS--CEECCCC
T ss_pred ---------CeEEEEEECcCCHHHHHHcCCcccCEEEEEeCCe-EEEeecCCCHHHHHHHHHHHhhccC--CCchhhh
Confidence 1678888999999999999999999999999999 5899999999999999999886542 2334554
No 35
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=99.78 E-value=5.5e-19 Score=141.64 Aligned_cols=104 Identities=31% Similarity=0.630 Sum_probs=93.8
Q ss_pred CceEEecchhhhhh-hccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCCC
Q psy1110 99 SEVVHLTDDNFDLV-IQEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKNG 177 (366)
Q Consensus 99 ~~v~~l~~~~~~~~-i~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~G 177 (366)
+.+..|++++|+.. ++++++++|.||++||++|+.+.|.++++++.+.++
T Consensus 2 ~~v~~l~~~~f~~~~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~~~----------------------------- 52 (108)
T 2trx_A 2 DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGK----------------------------- 52 (108)
T ss_dssp TTEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-----------------------------
T ss_pred CcceecchhhHHHHHHhcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhCCC-----------------------------
Confidence 36889999999964 467899999999999999999999999999988665
Q ss_pred cccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccC
Q psy1110 178 EPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSIN 257 (366)
Q Consensus 178 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~ 257 (366)
T Consensus 53 -------------------------------------------------------------------------------- 52 (108)
T 2trx_A 53 -------------------------------------------------------------------------------- 52 (108)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCC
Q psy1110 258 SGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDP 321 (366)
Q Consensus 258 ~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~ 321 (366)
+.++.+|++.+..++++|+|+++||+++|++|+.+.++.|.++.+.|.+||++.
T Consensus 53 ----------~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 106 (108)
T 2trx_A 53 ----------LTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDAN 106 (108)
T ss_dssp ----------EEEEEEETTTCTTHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHH
T ss_pred ----------cEEEEEECCCCHHHHHHcCCcccCEEEEEeCCEEEEEEecCCCHHHHHHHHHHh
Confidence 678888888888999999999999999999999999999999999999998754
No 36
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=99.77 E-value=4e-19 Score=142.68 Aligned_cols=98 Identities=14% Similarity=0.184 Sum_probs=79.0
Q ss_pred cchhhhhhhccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCCCcccccCC
Q psy1110 105 TDDNFDLVIQEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKNGEPTTHPS 184 (366)
Q Consensus 105 ~~~~~~~~i~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~G~~~~~~~ 184 (366)
+.++|+++++++++++|+|||+||++|+.+.|.++++++.+. +
T Consensus 7 ~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~-~------------------------------------ 49 (105)
T 4euy_A 7 TIEELATYIEEQQLVLLFIKTENCGVCDVMLRKVNYVLENYN-Y------------------------------------ 49 (105)
T ss_dssp ---CCSSSTTCSSEEEEEEEESSCHHHHHHHHHHHHHHHTCT-T------------------------------------
T ss_pred CHHHHHHHHhcCCCEEEEEeCCCCcchHHHHHHHHHHHHHcC-C------------------------------------
Confidence 557888888889999999999999999999999999998773 3
Q ss_pred CCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccCCCCCCCC
Q psy1110 185 GTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSINSGSFSPR 264 (366)
Q Consensus 185 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~~~~~~~~ 264 (366)
T Consensus 50 -------------------------------------------------------------------------------- 49 (105)
T 4euy_A 50 -------------------------------------------------------------------------------- 49 (105)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCC
Q psy1110 265 QITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPT 322 (366)
Q Consensus 265 ~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~ 322 (366)
+.++.+|++.+..++.+|+|+++||+++|++|+.+.++.|.++.+.|.++|+++.
T Consensus 50 ---~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~g~~~~~~l~~~l~~~~ 104 (105)
T 4euy_A 50 ---VEKIEILLQDMQEIAGRYAVFTGPTVLLFYNGKEILRESRFISLENLERTIQLFE 104 (105)
T ss_dssp ---EEEEEEEECCC---------CCCCEEEEEETTEEEEEEESSCCHHHHHHHHHTTC
T ss_pred ---ceEEEEECCCCHHHHHhcCCCCCCEEEEEeCCeEEEEEeCCcCHHHHHHHHHHhh
Confidence 6788888888889999999999999999999999999999999999999998765
No 37
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=99.77 E-value=1.2e-18 Score=138.94 Aligned_cols=104 Identities=24% Similarity=0.463 Sum_probs=94.6
Q ss_pred CceEEecchhhhhhh-ccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCCC
Q psy1110 99 SEVVHLTDDNFDLVI-QEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKNG 177 (366)
Q Consensus 99 ~~v~~l~~~~~~~~i-~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~G 177 (366)
+.+..|++++|+..+ .++++++|.||++||++|+.+.|.++++++.+.+.
T Consensus 2 ~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~----------------------------- 52 (107)
T 2i4a_A 2 EHTLAVSDSSFDQDVLKASGLVLVDFWAEWCGPCKMIGPALGEIGKEFAGK----------------------------- 52 (107)
T ss_dssp CCEEECCTTTHHHHTTTCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTS-----------------------------
T ss_pred CceeecchhhhhHHHHhCCCEEEEEEECCCChhHHHHhHHHHHHHHHhCCc-----------------------------
Confidence 468899999999765 67899999999999999999999999999988765
Q ss_pred cccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccC
Q psy1110 178 EPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSIN 257 (366)
Q Consensus 178 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~ 257 (366)
T Consensus 53 -------------------------------------------------------------------------------- 52 (107)
T 2i4a_A 53 -------------------------------------------------------------------------------- 52 (107)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCC
Q psy1110 258 SGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDP 321 (366)
Q Consensus 258 ~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~ 321 (366)
+.++.+|++.+..++++|+|+++||+++|++|+.+.++.|.++.+.|.+||+++
T Consensus 53 ----------~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 53 ----------VTVAKVNIDDNPETPNAYQVRSIPTLMLVRDGKVIDKKVGALPKSQLKAWVESA 106 (107)
T ss_dssp ----------EEEEEEETTTCCHHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHT
T ss_pred ----------EEEEEEECCCCHHHHHhcCCCccCEEEEEeCCEEEEEecCCCCHHHHHHHHHhc
Confidence 678888888888999999999999999999999999999999999999999764
No 38
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=99.77 E-value=5e-19 Score=150.94 Aligned_cols=108 Identities=24% Similarity=0.536 Sum_probs=99.6
Q ss_pred CCceEEecchhhhhhhccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCCC
Q psy1110 98 ESEVVHLTDDNFDLVIQEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKNG 177 (366)
Q Consensus 98 ~~~v~~l~~~~~~~~i~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~G 177 (366)
.+.+..++.++|+.++.++++++|+||++||++|+.+.|.|+++++.+.++
T Consensus 37 ~~~v~~l~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~----------------------------- 87 (148)
T 3p2a_A 37 DGEVINATAETLDKLLQDDLPMVIDFWAPWCGPCRSFAPIFAETAAERAGK----------------------------- 87 (148)
T ss_dssp CCCCEECCTTTHHHHTTCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTTTT-----------------------------
T ss_pred cCCceecCHHHHHHHHhcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcCCc-----------------------------
Confidence 457999999999999988999999999999999999999999999988766
Q ss_pred cccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccC
Q psy1110 178 EPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSIN 257 (366)
Q Consensus 178 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~ 257 (366)
T Consensus 88 -------------------------------------------------------------------------------- 87 (148)
T 3p2a_A 88 -------------------------------------------------------------------------------- 87 (148)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCCCC
Q psy1110 258 SGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPTEP 324 (366)
Q Consensus 258 ~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~~~ 324 (366)
+.++.+|++.+..++++|+|+++||+++|++|+.+.++.|.++.+.|.+||++.+..
T Consensus 88 ----------~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~ 144 (148)
T 3p2a_A 88 ----------VRFVKVNTEAEPALSTRFRIRSIPTIMLYRNGKMIDMLNGAVPKAPFDNWLDEQLSR 144 (148)
T ss_dssp ----------CEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEESSCCCHHHHHHHHHHHHHS
T ss_pred ----------eEEEEEECcCCHHHHHHCCCCccCEEEEEECCeEEEEEeCCCCHHHHHHHHHHHhcc
Confidence 678888898899999999999999999999999999999999999999999887654
No 39
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=99.77 E-value=6.3e-19 Score=151.81 Aligned_cols=129 Identities=17% Similarity=0.295 Sum_probs=99.4
Q ss_pred CCceEEec-chhhhhhhcc--CCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeec
Q psy1110 98 ESEVVHLT-DDNFDLVIQE--ESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRN 174 (366)
Q Consensus 98 ~~~v~~l~-~~~~~~~i~~--~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~ 174 (366)
.+.+..++ .++|+.++++ +++++|+||++||++|+.+.|.|+++++.+. +
T Consensus 11 ~~~v~~l~~~~~~~~~~~~~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-~-------------------------- 63 (153)
T 2wz9_A 11 VAAVEEVGSAGQFEELLRLKAKSLLVVHFWAPWAPQCAQMNEVMAELAKELP-Q-------------------------- 63 (153)
T ss_dssp -CCSEEECSHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-T--------------------------
T ss_pred cCCeEEcCCHHHHHHHHHhcCCCeEEEEEECCCCHhHHHHHHHHHHHHHHcC-C--------------------------
Confidence 34678887 4899999977 8999999999999999999999999998862 3
Q ss_pred CCCcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeecccccccc
Q psy1110 175 KNGEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIK 254 (366)
Q Consensus 175 ~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~ 254 (366)
T Consensus 64 -------------------------------------------------------------------------------- 63 (153)
T 2wz9_A 64 -------------------------------------------------------------------------------- 63 (153)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCCCCCCCCCCCCCC
Q psy1110 255 SINSGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPTEPPPPPPPEPAW 334 (366)
Q Consensus 255 p~~~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~~~~~~~~~~~~~ 334 (366)
+.++.+|++.+..++++|+|+++||+++|++|+.+.++.|. +.++|.+||++.+....+++
T Consensus 64 -------------v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~-~~~~l~~~i~~~l~~~~~~~----- 124 (153)
T 2wz9_A 64 -------------VSFVKLEAEGVPEVSEKYEISSVPTFLFFKNSQKIDRLDGA-HAPELTKKVQRHASSGSFLP----- 124 (153)
T ss_dssp -------------SEEEEEETTTSHHHHHHTTCCSSSEEEEEETTEEEEEEESS-CHHHHHHHHHHHSCTTSSCS-----
T ss_pred -------------eEEEEEECCCCHHHHHHcCCCCCCEEEEEECCEEEEEEeCC-CHHHHHHHHHHHhccccCCC-----
Confidence 67888899989999999999999999999999998888884 78889999998886553322
Q ss_pred CCCCCeeEEechhcHHHHhhc
Q psy1110 335 AEEPSEVYHLGADNFASTLRK 355 (366)
Q Consensus 335 ~~~~~~v~~lt~~~~~~~~~~ 355 (366)
++.+..||.++|+.+...
T Consensus 125 ---~~~~~~l~~~~f~~~~~~ 142 (153)
T 2wz9_A 125 ---SAKVKVDTDPNSSSVDKL 142 (153)
T ss_dssp ---CCCCCCC-----------
T ss_pred ---ccccccCCCCChhhHHHH
Confidence 334667888888887643
No 40
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=99.77 E-value=7.3e-19 Score=152.39 Aligned_cols=107 Identities=31% Similarity=0.564 Sum_probs=98.3
Q ss_pred CCceEEecchhhhhhhccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCCC
Q psy1110 98 ESEVVHLTDDNFDLVIQEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKNG 177 (366)
Q Consensus 98 ~~~v~~l~~~~~~~~i~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~G 177 (366)
.+.+..+++.+|++++.++++++|+||++||++|+.+.|.|+++++.+.++
T Consensus 46 ~~~~~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~~~----------------------------- 96 (155)
T 2ppt_A 46 TGKVAGIDPAILARAERDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLAGQ----------------------------- 96 (155)
T ss_dssp CSSEEECCHHHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT-----------------------------
T ss_pred CCCCccCCHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHccCC-----------------------------
Confidence 457889999999998877899999999999999999999999999998766
Q ss_pred cccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccC
Q psy1110 178 EPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSIN 257 (366)
Q Consensus 178 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~ 257 (366)
T Consensus 97 -------------------------------------------------------------------------------- 96 (155)
T 2ppt_A 97 -------------------------------------------------------------------------------- 96 (155)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCCC
Q psy1110 258 SGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPTE 323 (366)
Q Consensus 258 ~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~~ 323 (366)
+.++++|++.+..++.+|+|+++||+++|++|+.+.++.|.++.+.|.+||++.++
T Consensus 97 ----------v~~~~vd~~~~~~l~~~~~i~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~ 152 (155)
T 2ppt_A 97 ----------VRLAKIDTQAHPAVAGRHRIQGIPAFILFHKGRELARAAGARPASELVGFVRGKLG 152 (155)
T ss_dssp ----------CEEEEEETTTSTHHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred ----------EEEEEEeCCccHHHHHHcCCCcCCEEEEEeCCeEEEEecCCCCHHHHHHHHHHHhc
Confidence 67888888888899999999999999999999999999999999999999987665
No 41
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=99.77 E-value=1.3e-18 Score=151.45 Aligned_cols=102 Identities=15% Similarity=0.225 Sum_probs=89.0
Q ss_pred eEEecc-hhhhhhh--ccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCCC
Q psy1110 101 VVHLTD-DNFDLVI--QEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKNG 177 (366)
Q Consensus 101 v~~l~~-~~~~~~i--~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~G 177 (366)
+..|+. ++|++.+ +++++|+|+|||+||++|+.+.|.++++|+++.+.
T Consensus 23 v~~l~t~~~f~~~v~~~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~----------------------------- 73 (160)
T 2av4_A 23 LQHLNSGWAVDQAIVNEDERLVCIRFGHDYDPDCMKMDELLYKVADDIKNF----------------------------- 73 (160)
T ss_dssp CEECCSHHHHHHHHHHCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT-----------------------------
T ss_pred hhccCCHHHHHHHHHhcCCCEEEEEEECCCChhHHHHHHHHHHHHHHccCC-----------------------------
Confidence 556655 8899866 36899999999999999999999999999999776
Q ss_pred cccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccC
Q psy1110 178 EPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSIN 257 (366)
Q Consensus 178 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~ 257 (366)
T Consensus 74 -------------------------------------------------------------------------------- 73 (160)
T 2av4_A 74 -------------------------------------------------------------------------------- 73 (160)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCcee--e-------ecCCCCC-HHHHHHHHhCC
Q psy1110 258 SGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVA--F-------DAGHLRD-ASRLVEFMRDP 321 (366)
Q Consensus 258 ~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~--~-------~~~g~~~-~e~l~~fi~~~ 321 (366)
+.|+++|.+++.+++.+|+|+++|||++|++|+.+ . +..|..+ .+.|.++|+..
T Consensus 74 ----------v~f~kVDVDe~~e~a~~y~V~siPT~~fFk~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~ 137 (160)
T 2av4_A 74 ----------CVIYLVDITEVPDFNTMYELYDPVSVMFFYRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETI 137 (160)
T ss_dssp ----------EEEEEEETTTCCTTTTTTTCCSSEEEEEEETTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHH
T ss_pred ----------cEEEEEECCCCHHHHHHcCCCCCCEEEEEECCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHH
Confidence 67888999999999999999999999999999987 3 6888876 88888888654
No 42
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.77 E-value=1.5e-18 Score=144.04 Aligned_cols=111 Identities=34% Similarity=0.647 Sum_probs=97.4
Q ss_pred cCCCCCceEEecchhhhhhh-ccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeee
Q psy1110 94 WADTESEVVHLTDDNFDLVI-QEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSL 172 (366)
Q Consensus 94 ~~~~~~~v~~l~~~~~~~~i-~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l 172 (366)
+....+.+..|+.++|+..+ +++++++|+||++||++|+.+.|.|+++++.+.+.
T Consensus 12 l~~~~~~v~~l~~~~f~~~~~~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~~~------------------------ 67 (130)
T 2dml_A 12 LYSSSDDVIELTPSNFNREVIQSDGLWLVEFYAPWCGHCQRLTPEWKKAATALKDV------------------------ 67 (130)
T ss_dssp SSCTTSSSEECCTTTHHHHTTTCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTTTT------------------------
T ss_pred ccCCCCCcEECCHHHHHHHHhcCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhcCc------------------------
Confidence 34456789999999999854 67899999999999999999999999999988665
Q ss_pred ecCCCcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeecccccc
Q psy1110 173 RNKNGEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKR 252 (366)
Q Consensus 173 ~~~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~ 252 (366)
T Consensus 68 -------------------------------------------------------------------------------- 67 (130)
T 2dml_A 68 -------------------------------------------------------------------------------- 67 (130)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCCCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCce-eeecCCCCCHHHHHHHHhCCCC
Q psy1110 253 IKSINSGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSV-AFDAGHLRDASRLVEFMRDPTE 323 (366)
Q Consensus 253 ~~p~~~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~-~~~~~g~~~~e~l~~fi~~~~~ 323 (366)
+.++.+|++.+..++.+|+|+++||+++|++|.. +.++.|.++.+.|.+|+.+.+.
T Consensus 68 ---------------~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~l~ 124 (130)
T 2dml_A 68 ---------------VKVGAVNADKHQSLGGQYGVQGFPTIKIFGANKNKPEDYQGGRTGEAIVDAALSALR 124 (130)
T ss_dssp ---------------SEEEEEETTTCHHHHHHHTCCSSSEEEEESSCTTSCEECCSCCSHHHHHHHHHHHHH
T ss_pred ---------------eEEEEEeCCCCHHHHHHcCCCccCEEEEEeCCCCeEEEeecCCCHHHHHHHHHHHHh
Confidence 6788889998999999999999999999988765 7889999999999999987653
No 43
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=99.76 E-value=1.4e-18 Score=145.50 Aligned_cols=106 Identities=29% Similarity=0.584 Sum_probs=94.7
Q ss_pred CCCceEEecchhhhhh-hccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecC
Q psy1110 97 TESEVVHLTDDNFDLV-IQEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNK 175 (366)
Q Consensus 97 ~~~~v~~l~~~~~~~~-i~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~ 175 (366)
..+.+..|+.++|+.. ++++++++|.||++||++|+.+.|.|+++++.+.++
T Consensus 20 m~~~v~~l~~~~f~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~--------------------------- 72 (128)
T 2o8v_B 20 HSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPAKMIAPILDEIADEYQGK--------------------------- 72 (128)
T ss_dssp -CCCSEEECTTTHHHHTTTCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTTTT---------------------------
T ss_pred cccccEecChhhHHHHHHhcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCC---------------------------
Confidence 3456899999999964 577899999999999999999999999999988765
Q ss_pred CCcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccc
Q psy1110 176 NGEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKS 255 (366)
Q Consensus 176 ~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p 255 (366)
T Consensus 73 -------------------------------------------------------------------------------- 72 (128)
T 2o8v_B 73 -------------------------------------------------------------------------------- 72 (128)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCC
Q psy1110 256 INSGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDP 321 (366)
Q Consensus 256 ~~~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~ 321 (366)
+.++.+|++.+..++++|+|+++||+++|++|+.+.++.|.++.+.|.+||++.
T Consensus 73 ------------v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 126 (128)
T 2o8v_B 73 ------------LTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDAN 126 (128)
T ss_dssp ------------EEEEEEETTTCCTTSGGGTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHH
T ss_pred ------------eEEEEEECCCCHHHHHHcCCCccCEEEEEeCCEEEEEEcCCCCHHHHHHHHHHh
Confidence 678888888888999999999999999999999999999999999999999754
No 44
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=99.76 E-value=1.1e-18 Score=155.39 Aligned_cols=124 Identities=17% Similarity=0.283 Sum_probs=99.5
Q ss_pred CceEEecchhhhhhhcc--CCeEEEEEEC-------CCChhhhcccHHHHHHHHHHhccccEEEeeccCCccccccccee
Q psy1110 99 SEVVHLTDDNFDLVIQE--ESSVLVMFYA-------PWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVV 169 (366)
Q Consensus 99 ~~v~~l~~~~~~~~i~~--~k~vlV~F~a-------~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~ 169 (366)
+.++.||+++|++++.+ +.+++|+||| +||++|+.+.|.|+++|+.|..+-
T Consensus 18 ~~vi~lt~~nF~~~v~~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~~~~-------------------- 77 (178)
T 3ga4_A 18 TGVITVTADNYPLLSRGVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIRSQA-------------------- 77 (178)
T ss_dssp TSEEECCTTTHHHHTTCCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHHHHC--------------------
T ss_pred CCCEECCHHHHHHHHcccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhhhcc--------------------
Confidence 47999999999998854 5689999999 499999999999999999997430
Q ss_pred eeeecCCCcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccc
Q psy1110 170 SSLRNKNGEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGT 249 (366)
Q Consensus 170 ~~l~~~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~ 249 (366)
T Consensus 78 -------------------------------------------------------------------------------- 77 (178)
T 3ga4_A 78 -------------------------------------------------------------------------------- 77 (178)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccCCCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCcee------------eec---CC-CCCHHH
Q psy1110 250 GKRIKSINSGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVA------------FDA---GH-LRDASR 313 (366)
Q Consensus 250 c~~~~p~~~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~------------~~~---~g-~~~~e~ 313 (366)
...++.|+++|.+++..++.+|+|+++|||++|++|... ..| .| .++++.
T Consensus 78 --------------~~~~v~f~kvD~d~~~~la~~~~I~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~ 143 (178)
T 3ga4_A 78 --------------PQSLNLFFTVDVNEVPQLVKDLKLQNVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQ 143 (178)
T ss_dssp --------------TTCCEEEEEEETTTCHHHHHHTTCCSSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHH
T ss_pred --------------CCCCEEEEEEECccCHHHHHHcCCCCCCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHH
Confidence 002388999999999999999999999999999988532 233 24 789999
Q ss_pred HHHHHhCCCCCCCCCCCCCCCCC
Q psy1110 314 LVEFMRDPTEPPPPPPPEPAWAE 336 (366)
Q Consensus 314 l~~fi~~~~~~~~~~~~~~~~~~ 336 (366)
|.+||.+.++...+-..++.|.+
T Consensus 144 la~fi~~~t~~~i~I~rp~ny~~ 166 (178)
T 3ga4_A 144 FGDFLAKILNISITVPQAFNVQE 166 (178)
T ss_dssp HHHHHHHHHTCCCCCCCSCC---
T ss_pred HHHHHHHhcCCCccccCCCChHH
Confidence 99999998886655544555544
No 45
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=99.76 E-value=1.6e-18 Score=146.87 Aligned_cols=107 Identities=24% Similarity=0.485 Sum_probs=97.8
Q ss_pred CCceEEecchhhh-hhhccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCC
Q psy1110 98 ESEVVHLTDDNFD-LVIQEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKN 176 (366)
Q Consensus 98 ~~~v~~l~~~~~~-~~i~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~ 176 (366)
.+.+..|++++|+ .+++++++++|+||++||++|+.+.|.|+++++.+.+.
T Consensus 5 ~~~v~~l~~~~f~~~~~~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~---------------------------- 56 (140)
T 3hz4_A 5 GSSIIEFEDMTWSQQVEDSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGSS---------------------------- 56 (140)
T ss_dssp TTTEEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT----------------------------
T ss_pred CcceEEcchHhHHHHHHhCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCCc----------------------------
Confidence 3579999999999 57778999999999999999999999999999998776
Q ss_pred CcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeecccccccccc
Q psy1110 177 GEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSI 256 (366)
Q Consensus 177 G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~ 256 (366)
T Consensus 57 -------------------------------------------------------------------------------- 56 (140)
T 3hz4_A 57 -------------------------------------------------------------------------------- 56 (140)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCCC
Q psy1110 257 NSGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPTE 323 (366)
Q Consensus 257 ~~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~~ 323 (366)
+.++.+|++.+..++.+|+|+++||+++|++|+.+.++.|.++.+.|.+||++.+.
T Consensus 57 -----------v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~ 112 (140)
T 3hz4_A 57 -----------AVFGRINIATNPWTAEKYGVQGTPTFKFFCHGRPVWEQVGQIYPSILKNAVRDMLQ 112 (140)
T ss_dssp -----------SEEEEEETTTCHHHHHHHTCCEESEEEEEETTEEEEEEESSCCHHHHHHHHHHHHH
T ss_pred -----------eEEEEEECCcCHhHHHHCCCCcCCEEEEEeCCcEEEEEcCCCCHHHHHHHHHHHhc
Confidence 67888899889999999999999999999999999999999999999999987653
No 46
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=99.75 E-value=2e-18 Score=139.48 Aligned_cols=106 Identities=23% Similarity=0.513 Sum_probs=95.5
Q ss_pred CCceEEecchhhhhhh-ccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCC
Q psy1110 98 ESEVVHLTDDNFDLVI-QEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKN 176 (366)
Q Consensus 98 ~~~v~~l~~~~~~~~i-~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~ 176 (366)
.+.+..|++++|+..+ .++++++|.||++||++|+.+.|.|+++++.+.++
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~---------------------------- 57 (115)
T 1thx_A 6 SKGVITITDAEFESEVLKAEQPVLVYFWASWCGPCQLMSPLINLAANTYSDR---------------------------- 57 (115)
T ss_dssp CCSEEECCGGGHHHHTTTCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTT----------------------------
T ss_pred cCceEEeeccchhhHhhcCCceEEEEEECCCCHHHHHhHHHHHHHHHHhCCc----------------------------
Confidence 4579999999999765 67899999999999999999999999999988765
Q ss_pred CcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeecccccccccc
Q psy1110 177 GEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSI 256 (366)
Q Consensus 177 G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~ 256 (366)
T Consensus 58 -------------------------------------------------------------------------------- 57 (115)
T 1thx_A 58 -------------------------------------------------------------------------------- 57 (115)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCC
Q psy1110 257 NSGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPT 322 (366)
Q Consensus 257 ~~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~ 322 (366)
+.++.+|++.+..++++|+|+++||+++|++|+.+.++.|.++.+.|.+||++..
T Consensus 58 -----------v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~g~~~~~~l~~~l~~~l 112 (115)
T 1thx_A 58 -----------LKVVKLEIDPNPTTVKKYKVEGVPALRLVKGEQILDSTEGVISKDKLLSFLDTHL 112 (115)
T ss_dssp -----------CEEEEEESTTCHHHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred -----------EEEEEEEcCCCHHHHHHcCCCceeEEEEEcCCEEEEEecCCCCHHHHHHHHHHHh
Confidence 6778888888889999999999999999999999999999999999999998654
No 47
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=99.75 E-value=1.9e-18 Score=143.88 Aligned_cols=77 Identities=25% Similarity=0.314 Sum_probs=60.7
Q ss_pred eccccccccccCCCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCC
Q psy1110 246 QVGTGKRIKSINSGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPT 322 (366)
Q Consensus 246 ~c~~c~~~~p~~~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~ 322 (366)
+|++|+++.|.+.+-.+....++.++++|++.+..++.+|+|+++||+++|++|+.+.++.|.++.++|.+||++.+
T Consensus 46 ~~~~C~~~~p~~~~l~~~~~~~~~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 122 (123)
T 1oaz_A 46 LVGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 122 (123)
T ss_dssp CCCCCCTTHHHHTTC-------CEEEEEETTSCTTTGGGGTCCBSSEEEEEESSSEEEEEESCCCHHHHHHHHTTTC
T ss_pred CCCCcHHHHHHHHHHHHHhcCCeEEEEEECCCCHHHHHHcCCCccCEEEEEECCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 45666666666543322222348899999999999999999999999999999999999999999999999998865
No 48
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=99.75 E-value=2.7e-18 Score=144.65 Aligned_cols=109 Identities=25% Similarity=0.449 Sum_probs=96.1
Q ss_pred CCceEEecchhhhhhhc------------cCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccc
Q psy1110 98 ESEVVHLTDDNFDLVIQ------------EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASN 165 (366)
Q Consensus 98 ~~~v~~l~~~~~~~~i~------------~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~ 165 (366)
...+..|++++|++.+. ++++++|+||++||++|+++.|.|+++++.+.+.
T Consensus 8 ~~~v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~~~----------------- 70 (136)
T 2l5l_A 8 NGKVIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYDGQ----------------- 70 (136)
T ss_dssp TTSEEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTTTT-----------------
T ss_pred CCceEEecchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCC-----------------
Confidence 34789999999998774 4689999999999999999999999999988765
Q ss_pred cceeeeeecCCCcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceee
Q psy1110 166 VAVVSSLRNKNGEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELR 245 (366)
Q Consensus 166 ~~v~~~l~~~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 245 (366)
T Consensus 71 -------------------------------------------------------------------------------- 70 (136)
T 2l5l_A 71 -------------------------------------------------------------------------------- 70 (136)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eccccccccccCCCCCCCCccceeEEEEecccccccccccccccCCeEEEe-cCCceeeecCCCCCHHHHHHHHhCCCCC
Q psy1110 246 QVGTGKRIKSINSGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYF-RAGSVAFDAGHLRDASRLVEFMRDPTEP 324 (366)
Q Consensus 246 ~c~~c~~~~p~~~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~f-k~G~~~~~~~g~~~~e~l~~fi~~~~~~ 324 (366)
+.++.+|++.+..++++|+|+++||+++| ++|+.+ .+.|.++.+.|.+||++....
T Consensus 71 ----------------------v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~~G~~~-~~~G~~~~~~l~~~l~~~~~~ 127 (136)
T 2l5l_A 71 ----------------------IVIYKVDTEKEQELAGAFGIRSIPSILFIPMEGKPE-MAQGAMPKASFKKAIDEFLLK 127 (136)
T ss_dssp ----------------------CEEEEEETTTCHHHHHHTTCCSSCEEEEECSSSCCE-EEESCCCHHHHHHHHHHHHTS
T ss_pred ----------------------EEEEEEeCCCCHHHHHHcCCCCCCEEEEECCCCcEE-EEeCCCCHHHHHHHHHHHhhc
Confidence 67888888888899999999999999999 899976 788999999999999887665
Q ss_pred CC
Q psy1110 325 PP 326 (366)
Q Consensus 325 ~~ 326 (366)
..
T Consensus 128 ~~ 129 (136)
T 2l5l_A 128 KE 129 (136)
T ss_dssp CT
T ss_pred cC
Confidence 43
No 49
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=99.75 E-value=6.8e-19 Score=144.50 Aligned_cols=105 Identities=21% Similarity=0.391 Sum_probs=91.9
Q ss_pred CCCCceEEecchhhhhhhc--cCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeee
Q psy1110 96 DTESEVVHLTDDNFDLVIQ--EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLR 173 (366)
Q Consensus 96 ~~~~~v~~l~~~~~~~~i~--~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~ 173 (366)
+..+.+...+.++|+++++ ++++++|+|||+||++|+.+.|.|+++++.+.+
T Consensus 9 ~~~~~~~~~t~~~f~~~l~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~-------------------------- 62 (116)
T 3qfa_C 9 HHGSVKQIESKTAFQEALDAAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYSN-------------------------- 62 (116)
T ss_dssp ---CCBCCCCHHHHHHHHHHHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCTT--------------------------
T ss_pred cCCcccCCCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC--------------------------
Confidence 3455778889999999997 799999999999999999999999999876633
Q ss_pred cCCCcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccc
Q psy1110 174 NKNGEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRI 253 (366)
Q Consensus 174 ~~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~ 253 (366)
T Consensus 63 -------------------------------------------------------------------------------- 62 (116)
T 3qfa_C 63 -------------------------------------------------------------------------------- 62 (116)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCC
Q psy1110 254 KSINSGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDP 321 (366)
Q Consensus 254 ~p~~~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~ 321 (366)
+.++.+|++++..++++|+|+++||+++|++|+.+.++.|. +.+.|.++|+++
T Consensus 63 --------------v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~~ 115 (116)
T 3qfa_C 63 --------------VIFLEVDVDDCQDVASECEVKSMPTFQFFKKGQKVGEFSGA-NKEKLEATINEL 115 (116)
T ss_dssp --------------SEEEEEETTTTHHHHHHTTCCSSSEEEEESSSSEEEEEESC-CHHHHHHHHHHH
T ss_pred --------------CEEEEEECCCCHHHHHHcCCccccEEEEEeCCeEEEEEcCC-CHHHHHHHHHHh
Confidence 56788888888899999999999999999999999999998 999999998753
No 50
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=99.75 E-value=2.5e-18 Score=137.52 Aligned_cols=104 Identities=24% Similarity=0.468 Sum_probs=93.1
Q ss_pred ceEEecchhhhhhh-ccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCCCc
Q psy1110 100 EVVHLTDDNFDLVI-QEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKNGE 178 (366)
Q Consensus 100 ~v~~l~~~~~~~~i-~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~G~ 178 (366)
.+..+++++|++.+ +++++++|.||++||++|+.+.|.++++++.+.++
T Consensus 2 ~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~------------------------------ 51 (107)
T 1dby_A 2 EAGAVNDDTFKNVVLESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYKDK------------------------------ 51 (107)
T ss_dssp CCEEECHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT------------------------------
T ss_pred ccEeccHHHHHHHHhcCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhCCc------------------------------
Confidence 36789999999865 66899999999999999999999999999988665
Q ss_pred ccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccCC
Q psy1110 179 PTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSINS 258 (366)
Q Consensus 179 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~~ 258 (366)
T Consensus 52 -------------------------------------------------------------------------------- 51 (107)
T 1dby_A 52 -------------------------------------------------------------------------------- 51 (107)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCC
Q psy1110 259 GSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPT 322 (366)
Q Consensus 259 ~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~ 322 (366)
+.++.+|++.+..++++|+|+++||+++|++|+.+.++.|..+.+.|.++|++.+
T Consensus 52 ---------~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 106 (107)
T 1dby_A 52 ---------LKCVKLNTDESPNVASEYGIRSIPTIMVFKGGKKCETIIGAVPKATIVQTVEKYL 106 (107)
T ss_dssp ---------CEEEEEETTTCHHHHHHHTCCSSCEEEEESSSSEEEEEESCCCHHHHHHHHHHHC
T ss_pred ---------eEEEEEECCCCHHHHHHCCCCcCCEEEEEeCCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 6678888888889999999999999999999999999999999999999987643
No 51
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=99.75 E-value=4.7e-18 Score=137.25 Aligned_cols=105 Identities=25% Similarity=0.529 Sum_probs=93.9
Q ss_pred CceEEecchhhhhh-hccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCCC
Q psy1110 99 SEVVHLTDDNFDLV-IQEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKNG 177 (366)
Q Consensus 99 ~~v~~l~~~~~~~~-i~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~G 177 (366)
+.+..+++++|++. ++++++++|.||++||++|+.+.|.++++++.+.+.
T Consensus 5 ~~v~~l~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~----------------------------- 55 (112)
T 1t00_A 5 GTLKHVTDDSFEQDVLKNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEYGDK----------------------------- 55 (112)
T ss_dssp CCCEEECTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-----------------------------
T ss_pred ceEEecchhhHHHHHhhCCCeEEEEEECCCCHhHHhcCHHHHHHHHHhcCC-----------------------------
Confidence 46889999999864 467899999999999999999999999999988665
Q ss_pred cccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccC
Q psy1110 178 EPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSIN 257 (366)
Q Consensus 178 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~ 257 (366)
T Consensus 56 -------------------------------------------------------------------------------- 55 (112)
T 1t00_A 56 -------------------------------------------------------------------------------- 55 (112)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCC
Q psy1110 258 SGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPT 322 (366)
Q Consensus 258 ~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~ 322 (366)
+.++.+|++.+..++++|+|+++||+++|++|+.+.++.|.++.+.|.+||++.+
T Consensus 56 ----------~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 110 (112)
T 1t00_A 56 ----------IEIVKLNIDENPGTAAKYGVMSIPTLNVYQGGEVAKTIVGAKPKAAIVRDLEDFI 110 (112)
T ss_dssp ----------CEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHTHHHH
T ss_pred ----------eEEEEEEcCCCHHHHHhCCCCcccEEEEEeCCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 6778888888889999999999999999999999999999999999999987643
No 52
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=99.75 E-value=4.2e-18 Score=139.42 Aligned_cols=110 Identities=33% Similarity=0.675 Sum_probs=92.0
Q ss_pred CCCceEEecchhhhhhh-ccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecC
Q psy1110 97 TESEVVHLTDDNFDLVI-QEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNK 175 (366)
Q Consensus 97 ~~~~v~~l~~~~~~~~i-~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~ 175 (366)
..+.+..|++++|+..+ .++++++|+|||+||++|+.+.|.|+++++.+.+.-
T Consensus 5 ~~~~v~~l~~~~f~~~v~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~~-------------------------- 58 (121)
T 2djj_A 5 SEGPVTVVVAKNYNEIVLDDTKDVLIEFYAPWCGHCKALAPKYEELGALYAKSE-------------------------- 58 (121)
T ss_dssp CSCSSEECCTTTTTTSSSCTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTTSS--------------------------
T ss_pred CCCCeEEecccCHHHHhhcCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhhcc--------------------------
Confidence 34578999999999886 678999999999999999999999999999997620
Q ss_pred CCcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccc
Q psy1110 176 NGEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKS 255 (366)
Q Consensus 176 ~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p 255 (366)
T Consensus 59 -------------------------------------------------------------------------------- 58 (121)
T 2djj_A 59 -------------------------------------------------------------------------------- 58 (121)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCce--eeecCCCCCHHHHHHHHhCCCC
Q psy1110 256 INSGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSV--AFDAGHLRDASRLVEFMRDPTE 323 (366)
Q Consensus 256 ~~~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~--~~~~~g~~~~e~l~~fi~~~~~ 323 (366)
...++.++.+|++.+. +++ +|+++||+++|++|.. +.++.|.++.+.|.+||++++.
T Consensus 59 --------~~~~v~~~~vd~~~~~-~~~--~v~~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~i~~~~~ 117 (121)
T 2djj_A 59 --------FKDRVVIAKVDATAND-VPD--EIQGFPTIKLYPAGAKGQPVTYSGSRTVEDLIKFIAENGK 117 (121)
T ss_dssp --------CTTSSEEEEEETTTSC-CSS--CCSSSSEEEEECSSCTTSCCCCCCCSCHHHHHHHHHHTSS
T ss_pred --------cCCceEEEEEECcccc-ccc--ccCcCCeEEEEeCcCCCCceEecCCCCHHHHHHHHHhccC
Confidence 0012678888888765 555 9999999999988754 7889999999999999998764
No 53
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.75 E-value=1.4e-18 Score=157.35 Aligned_cols=111 Identities=26% Similarity=0.479 Sum_probs=101.4
Q ss_pred CCCCceEEecchhhhhhhccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecC
Q psy1110 96 DTESEVVHLTDDNFDLVIQEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNK 175 (366)
Q Consensus 96 ~~~~~v~~l~~~~~~~~i~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~ 175 (366)
+....+..|++.+|+..+.++++++|.||++||++|+.+.|.|+++++.+.+.
T Consensus 94 ~~~~~v~~l~~~~f~~~~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~--------------------------- 146 (210)
T 3apq_A 94 DDDPEIITLERREFDAAVNSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGL--------------------------- 146 (210)
T ss_dssp TTCTTSEECCHHHHHHHHHHSCCEEEEEECTTCHHHHHHHHHHHHHHHHTBTT---------------------------
T ss_pred CCCCceEEecHHHHHHHHccCCcEEEEEeCCCChhHHHHHHHHHHHHHHhcCc---------------------------
Confidence 34557899999999999988999999999999999999999999999988665
Q ss_pred CCcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccc
Q psy1110 176 NGEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKS 255 (366)
Q Consensus 176 ~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p 255 (366)
T Consensus 147 -------------------------------------------------------------------------------- 146 (210)
T 3apq_A 147 -------------------------------------------------------------------------------- 146 (210)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCCCCC
Q psy1110 256 INSGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPTEPP 325 (366)
Q Consensus 256 ~~~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~~~~ 325 (366)
+.++.+|++.+..++.+|+|+++||+++|++|+.+.++.|.++.+.|.+||.+.+.+.
T Consensus 147 ------------v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~i~~~l~~~ 204 (210)
T 3apq_A 147 ------------LRIGAVNCGDDRMLCRMKGVNSYPSLFIFRSGMAAVKYNGDRSKESLVAFAMQHVRST 204 (210)
T ss_dssp ------------BEEEEEETTTCHHHHHHTTCCSSSEEEEECTTSCCEECCSCCCHHHHHHHHHHHHHCC
T ss_pred ------------eEEEEEECCccHHHHHHcCCCcCCeEEEEECCCceeEecCCCCHHHHHHHHHHhCccc
Confidence 6788889998999999999999999999999999999999999999999999887655
No 54
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=99.75 E-value=4.7e-18 Score=138.93 Aligned_cols=107 Identities=28% Similarity=0.498 Sum_probs=96.1
Q ss_pred CCceEEecchhhhh-hhccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCC
Q psy1110 98 ESEVVHLTDDNFDL-VIQEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKN 176 (366)
Q Consensus 98 ~~~v~~l~~~~~~~-~i~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~ 176 (366)
.+.+..|++++|+. +++++++++|.||++||++|+.+.|.++++++.+.+.
T Consensus 11 ~~~v~~l~~~~~~~~~~~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~~~---------------------------- 62 (121)
T 2i1u_A 11 KSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATD---------------------------- 62 (121)
T ss_dssp -CCSEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT----------------------------
T ss_pred cccceecCHHHHHHHHHhCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCC----------------------------
Confidence 45789999999986 4567899999999999999999999999999988665
Q ss_pred CcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeecccccccccc
Q psy1110 177 GEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSI 256 (366)
Q Consensus 177 G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~ 256 (366)
T Consensus 63 -------------------------------------------------------------------------------- 62 (121)
T 2i1u_A 63 -------------------------------------------------------------------------------- 62 (121)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCCC
Q psy1110 257 NSGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPTE 323 (366)
Q Consensus 257 ~~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~~ 323 (366)
+.++.+|++.+..++++|+|+++||+++|++|+.+.++.|.++.+.|.+||++...
T Consensus 63 -----------~~~~~v~~~~~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~G~~~~~~l~~~l~~~l~ 118 (121)
T 2i1u_A 63 -----------LTVAKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVVP 118 (121)
T ss_dssp -----------CEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHTCSCCC
T ss_pred -----------eEEEEEECCCCHHHHHhcCCCcCCEEEEEECCEEEEEecCCCCHHHHHHHHHHHHh
Confidence 67888888888899999999999999999999999999999999999999988764
No 55
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=99.74 E-value=5e-18 Score=137.78 Aligned_cols=105 Identities=27% Similarity=0.502 Sum_probs=94.3
Q ss_pred CCCceEEecchhhhhhhccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCC
Q psy1110 97 TESEVVHLTDDNFDLVIQEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKN 176 (366)
Q Consensus 97 ~~~~v~~l~~~~~~~~i~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~ 176 (366)
.++....++.++|+++++++++++|+||++||++|+.+.|.++++++.+. .
T Consensus 7 ~~~~~~~~~~~~f~~~~~~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~~-~---------------------------- 57 (112)
T 1syr_A 7 HHMVKIVTSQAEFDSIISQNELVIVDFFAEWCGPCKRIAPFYEECSKTYT-K---------------------------- 57 (112)
T ss_dssp --CCEEECSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT-T----------------------------
T ss_pred ceeEEEECCHHHHHHHHccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC-C----------------------------
Confidence 45678999999999999999999999999999999999999999988764 3
Q ss_pred CcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeecccccccccc
Q psy1110 177 GEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSI 256 (366)
Q Consensus 177 G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~ 256 (366)
T Consensus 58 -------------------------------------------------------------------------------- 57 (112)
T 1syr_A 58 -------------------------------------------------------------------------------- 57 (112)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCC
Q psy1110 257 NSGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPT 322 (366)
Q Consensus 257 ~~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~ 322 (366)
+.++.+|++.+..++++|+|+++||+++|++|+.+.++.|. +.+.|.+||++.+
T Consensus 58 -----------v~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~~l 111 (112)
T 1syr_A 58 -----------MVFIKVDVDEVSEVTEKENITSMPTFKVYKNGSSVDTLLGA-NDSALKQLIEKYA 111 (112)
T ss_dssp -----------SEEEEEETTTTHHHHHHTTCCSSSEEEEEETTEEEEEEESC-CHHHHHHHHHTTC
T ss_pred -----------CEEEEEECCCCHHHHHHcCCCcccEEEEEECCcEEEEEeCC-CHHHHHHHHHHhh
Confidence 56788888888899999999999999999999999999998 9999999998765
No 56
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=99.74 E-value=2.5e-18 Score=141.48 Aligned_cols=106 Identities=25% Similarity=0.469 Sum_probs=95.1
Q ss_pred CCCceEEecchhhhhhh-ccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecC
Q psy1110 97 TESEVVHLTDDNFDLVI-QEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNK 175 (366)
Q Consensus 97 ~~~~v~~l~~~~~~~~i-~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~ 175 (366)
..+.+..+++++|++.+ +++++++|+||++||++|+.+.|.|+++++.+.++
T Consensus 11 ~~~~~~~~~~~~f~~~v~~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~~~~--------------------------- 63 (119)
T 1w4v_A 11 GSTTFNIQDGPDFQDRVVNSETPVVVDFHAQWCGPCKILGPRLEKMVAKQHGK--------------------------- 63 (119)
T ss_dssp CCSEEECCSHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTS---------------------------
T ss_pred CceEEEecChhhHHHHHHcCCCcEEEEEECCCCHHHHHHHHHHHHHHHHhcCC---------------------------
Confidence 34578999999999854 67899999999999999999999999999888655
Q ss_pred CCcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccc
Q psy1110 176 NGEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKS 255 (366)
Q Consensus 176 ~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p 255 (366)
T Consensus 64 -------------------------------------------------------------------------------- 63 (119)
T 1w4v_A 64 -------------------------------------------------------------------------------- 63 (119)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCC
Q psy1110 256 INSGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDP 321 (366)
Q Consensus 256 ~~~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~ 321 (366)
+.++.+|++.+..++++|+|+++||+++|++|+.+.++.|.++.+.|.+||++.
T Consensus 64 ------------v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 117 (119)
T 1w4v_A 64 ------------VVMAKVDIDDHTDLAIEYEVSAVPTVLAMKNGDVVDKFVGIKDEDQLEAFLKKL 117 (119)
T ss_dssp ------------SEEEEEETTTTHHHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHH
T ss_pred ------------eEEEEEeCCCCHHHHHHcCCCcccEEEEEeCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 678888888888999999999999999999999999999999999999999754
No 57
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=99.74 E-value=4.7e-18 Score=141.56 Aligned_cols=100 Identities=18% Similarity=0.440 Sum_probs=89.1
Q ss_pred EecchhhhhhhccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCCCccccc
Q psy1110 103 HLTDDNFDLVIQEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKNGEPTTH 182 (366)
Q Consensus 103 ~l~~~~~~~~i~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~G~~~~~ 182 (366)
.+++..++....++++++|+||++||++|+.+.|.++++++.+.++
T Consensus 29 ~~~~~~~~~~~~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~~~---------------------------------- 74 (128)
T 3ul3_B 29 QNGSNIINGVNMKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYGKR---------------------------------- 74 (128)
T ss_dssp CCCCSSSSBTTSCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGG----------------------------------
T ss_pred cCCccHHHHHHccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhcCC----------------------------------
Confidence 3444445566678999999999999999999999999999999766
Q ss_pred CCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccCCCCCC
Q psy1110 183 PSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSINSGSFS 262 (366)
Q Consensus 183 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~~~~~~ 262 (366)
T Consensus 75 -------------------------------------------------------------------------------- 74 (128)
T 3ul3_B 75 -------------------------------------------------------------------------------- 74 (128)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCC
Q psy1110 263 PRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDP 321 (366)
Q Consensus 263 ~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~ 321 (366)
+.++.+|++.+..++++|+|+++||+++|++|+.+.++.|.++.++|.+||+++
T Consensus 75 -----v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 128 (128)
T 3ul3_B 75 -----IYLLKVDLDKNESLARKFSVKSLPTIILLKNKTMLARKDHFVSSNDLIALIKKH 128 (128)
T ss_dssp -----EEEEEEEGGGCHHHHHHTTCCSSSEEEEEETTEEEEEESSCCCHHHHHHHHTTC
T ss_pred -----eEEEEEECCCCHHHHHHcCCCCcCEEEEEECCEEEEEecCCCCHHHHHHHHHhC
Confidence 778888999999999999999999999999999999999999999999999764
No 58
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.74 E-value=6.3e-18 Score=159.28 Aligned_cols=105 Identities=23% Similarity=0.419 Sum_probs=97.3
Q ss_pred CceEEecchhhhhhhcc--CCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCC
Q psy1110 99 SEVVHLTDDNFDLVIQE--ESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKN 176 (366)
Q Consensus 99 ~~v~~l~~~~~~~~i~~--~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~ 176 (366)
+.|..+|.++|++++.. +++|+|+||++||++|+.+.|.|+++++++.++
T Consensus 7 ~~v~~~~~~~f~~~~~~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~~~---------------------------- 58 (287)
T 3qou_A 7 ENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPILESLAAQYNGQ---------------------------- 58 (287)
T ss_dssp TTEEECCTTTHHHHHTTTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHTSS----------------------------
T ss_pred CccEECCHHHHHHHHHhcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcCCC----------------------------
Confidence 46899999999998864 899999999999999999999999999999776
Q ss_pred CcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeecccccccccc
Q psy1110 177 GEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSI 256 (366)
Q Consensus 177 G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~ 256 (366)
T Consensus 59 -------------------------------------------------------------------------------- 58 (287)
T 3qou_A 59 -------------------------------------------------------------------------------- 58 (287)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCC
Q psy1110 257 NSGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPT 322 (366)
Q Consensus 257 ~~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~ 322 (366)
+.++++|++.+..++.+|+|+++||+++|++|+.+.++.|.++.+.+.+|+.+..
T Consensus 59 -----------~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~g~~~~~~l~~~l~~~l 113 (287)
T 3qou_A 59 -----------FILAKLDCDAEQMIAAQFGLRAIPTVYLFQNGQPVDGFQGPQPEEAIRALLDXVL 113 (287)
T ss_dssp -----------SEEEEEETTTCHHHHHTTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHS
T ss_pred -----------eEEEEEeCccCHHHHHHcCCCCCCeEEEEECCEEEEEeeCCCCHHHHHHHHHHHc
Confidence 6788899999999999999999999999999999999999999999999998776
No 59
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=99.74 E-value=6.9e-18 Score=154.27 Aligned_cols=112 Identities=29% Similarity=0.595 Sum_probs=100.9
Q ss_pred CCCCceEEecchhhhh-hhccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeec
Q psy1110 96 DTESEVVHLTDDNFDL-VIQEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRN 174 (366)
Q Consensus 96 ~~~~~v~~l~~~~~~~-~i~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~ 174 (366)
...+.+..||+++|+. +++++++++|+|||+||++|+.+.|.|+++++.+.+.
T Consensus 9 ~~~~~~~~lt~~~f~~~v~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~~-------------------------- 62 (222)
T 3dxb_A 9 PMSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGK-------------------------- 62 (222)
T ss_dssp CCSCCCEECCTTTHHHHHTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT--------------------------
T ss_pred CCCCCceeCCHHHHHHHHHhcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcCC--------------------------
Confidence 3456799999999997 5678999999999999999999999999999998766
Q ss_pred CCCcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeecccccccc
Q psy1110 175 KNGEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIK 254 (366)
Q Consensus 175 ~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~ 254 (366)
T Consensus 63 -------------------------------------------------------------------------------- 62 (222)
T 3dxb_A 63 -------------------------------------------------------------------------------- 62 (222)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCCCCCC
Q psy1110 255 SINSGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPTEPPP 326 (366)
Q Consensus 255 p~~~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~~~~~ 326 (366)
+.++.+|++.+..++.+|+|+++||+++|++|+.+.++.|.++.+.|.+||++......
T Consensus 63 -------------v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~~~ 121 (222)
T 3dxb_A 63 -------------LTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLAGSA 121 (222)
T ss_dssp -------------CEEEEEETTTCTTTGGGGTCCSBSEEEEEETTEEEEEEESCCCHHHHHHHHHHHSCCSC
T ss_pred -------------cEEEEEECCCCHHHHHHcCCCcCCEEEEEECCeEEEEeccccChHHHHHHHHhhccccc
Confidence 67788888888899999999999999999999999999999999999999998876543
No 60
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=99.74 E-value=4.9e-18 Score=143.09 Aligned_cols=107 Identities=26% Similarity=0.448 Sum_probs=93.2
Q ss_pred CCCceEEecchhhhhhhc------------cCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCccccc
Q psy1110 97 TESEVVHLTDDNFDLVIQ------------EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQAS 164 (366)
Q Consensus 97 ~~~~v~~l~~~~~~~~i~------------~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~ 164 (366)
.++.+..|+.++|+..+. ++++++|+||++||++|+.+.|.|+++++.+.+.
T Consensus 20 ~~~~v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~---------------- 83 (141)
T 3hxs_A 20 PQSGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYAGK---------------- 83 (141)
T ss_dssp ---CCEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTTTT----------------
T ss_pred CCCCcccccHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcCc----------------
Confidence 456899999999998775 3799999999999999999999999999998766
Q ss_pred ccceeeeeecCCCcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCccee
Q psy1110 165 NVAVVSSLRNKNGEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWEL 244 (366)
Q Consensus 165 ~~~v~~~l~~~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 244 (366)
T Consensus 84 -------------------------------------------------------------------------------- 83 (141)
T 3hxs_A 84 -------------------------------------------------------------------------------- 83 (141)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeccccccccccCCCCCCCCccceeEEEEecccccccccccccccCCeEEEe-cCCceeeecCCCCCHHHHHHHHhCCCC
Q psy1110 245 RQVGTGKRIKSINSGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYF-RAGSVAFDAGHLRDASRLVEFMRDPTE 323 (366)
Q Consensus 245 ~~c~~c~~~~p~~~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~f-k~G~~~~~~~g~~~~e~l~~fi~~~~~ 323 (366)
+.++.+|++.+..++++|+|+++||+++| ++|+++ ++.|.++.+.|.+||++.+.
T Consensus 84 -----------------------~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~~g~~~-~~~G~~~~~~l~~~l~~~l~ 139 (141)
T 3hxs_A 84 -----------------------IYIYKVNVDKEPELARDFGIQSIPTIWFVPMKGEPQ-VNMGALSKEQLKGYIDKVLL 139 (141)
T ss_dssp -----------------------CEEEEEETTTCHHHHHHTTCCSSSEEEEECSSSCCE-EEESCCCHHHHHHHHHHTTC
T ss_pred -----------------------eEEEEEECCCCHHHHHHcCCCCcCEEEEEeCCCCEE-EEeCCCCHHHHHHHHHHHHc
Confidence 67888888889999999999999999999 667754 89999999999999987764
No 61
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=99.73 E-value=3.5e-17 Score=161.38 Aligned_cols=191 Identities=9% Similarity=0.136 Sum_probs=137.8
Q ss_pred chHHHhhcC----CCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeE-eecCCccHHHHHHHHhCcCCcchhh
Q psy1110 15 SPLAKEIVK----PKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKY-VYENGNTKDKIIEFVRNPQATSEEV 87 (366)
Q Consensus 15 ~~la~e~~~----~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~-~y~g~r~~~~i~~fi~~~~~~~~~~ 87 (366)
..+|+++.. .+.|.+++|||.. +.++|.+++|+ ||+.+|++|.... .|.|.|+.+.|++|+.+...+
T Consensus 45 ~~~a~~~~~~~~~~~~v~~~~Vd~~~--~~~l~~~~~v~~~Pt~~~f~~G~~~~~~~~G~~~~~~l~~~i~~~~~~---- 118 (382)
T 2r2j_A 45 EEASDVIKEEFPNENQVVFARVDCDQ--HSDIAQRYRISKYPTLKLFRNGMMMKREYRGQRSVKALADYIRQQKSD---- 118 (382)
T ss_dssp HHHHHHHTTCC---CCEEEEEEETTT--CHHHHHHTTCCEESEEEEEETTEEEEEECCSCCSHHHHHHHHHHHHSC----
T ss_pred HHHHHHHHhhcCCCCceEEEEEECCc--cHHHHHhcCCCcCCEEEEEeCCcEeeeeecCcchHHHHHHHHHHhccC----
Confidence 457777753 3569999999966 55999999999 9999999987655 699999999999999887765
Q ss_pred hccCCCcCCCCCceEEecc-hhhhhhhccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCccccccc
Q psy1110 88 KKKEQDWADTESEVVHLTD-DNFDLVIQEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNV 166 (366)
Q Consensus 88 ~~~~~~~~~~~~~v~~l~~-~~~~~~i~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~ 166 (366)
.+..+++ ++++. +.+++.++|.||+++|.+ ..+.|+++|..+.+.
T Consensus 119 ------------~v~~l~~~~~l~~-l~~~~~~~v~ff~~~~~~---~~~~f~~~A~~~~~~------------------ 164 (382)
T 2r2j_A 119 ------------PIQEIRDLAEITT-LDRSKRNIIGYFEQKDSD---NYRVFERVANILHDD------------------ 164 (382)
T ss_dssp ------------CCEEC-------------CCEEEEEESCSSSH---HHHHHHHHHHHHTTT------------------
T ss_pred ------------CceecCCHHHHHH-hcCCCCEEEEEECCCCCh---hHHHHHHHHHHhhcc------------------
Confidence 3555643 46777 666788999999998765 467899999998776
Q ss_pred ceeeeeecCCCcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeee
Q psy1110 167 AVVSSLRNKNGEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQ 246 (366)
Q Consensus 167 ~v~~~l~~~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (366)
T Consensus 165 -------------------------------------------------------------------------------- 164 (382)
T 2r2j_A 165 -------------------------------------------------------------------------------- 164 (382)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccccccCCCCCCCCccceeEEEEecccccccccccccccCCeEEEecCC--ceeeecCCCC-CHHHHHHHHhCCCC
Q psy1110 247 VGTGKRIKSINSGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAG--SVAFDAGHLR-DASRLVEFMRDPTE 323 (366)
Q Consensus 247 c~~c~~~~p~~~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G--~~~~~~~g~~-~~e~l~~fi~~~~~ 323 (366)
+.|+...+ .+.+.++++++| +++++.| .....|.|.+ +.++|.+||.++..
T Consensus 165 ---------------------~~F~~~~~----~~~~~~~v~~~p-i~~~~~~~~~~~~~y~g~~~~~~~l~~fi~~~~~ 218 (382)
T 2r2j_A 165 ---------------------CAFLSAFG----DVSKPERYSGDN-IIYKPPGHSAPDMVYLGAMTNFDVTYNWIQDKCV 218 (382)
T ss_dssp ---------------------CEEEEEES----CC--------CE-EEEECSSSSSCCEECCSCTTCHHHHHHHHHHHHS
T ss_pred ---------------------ceEEEEeh----hhHHhhCCCCCc-eEECCCCCCCcCcccCCCCCCHHHHHHHHHhccc
Confidence 33433333 356778899999 6666543 2357788888 89999999999998
Q ss_pred CCCCCCCCCCCCCCCCeeEEechhcHHHHhhccCceEEEEecC
Q psy1110 324 PPPPPPPEPAWAEEPSEVYHLGADNFASTLRKKKHALVMFYAP 366 (366)
Q Consensus 324 ~~~~~~~~~~~~~~~~~v~~lt~~~~~~~~~~~~~~~v~fy~~ 366 (366)
|. |.++|.+++..++..+.+++++||.+
T Consensus 219 p~---------------v~elt~~~~~~~~~~~~~~~v~f~~~ 246 (382)
T 2r2j_A 219 PL---------------VREITFENGEELTEEGLPFLILFHMK 246 (382)
T ss_dssp CS---------------SEECCHHHHHHHHTTCCCEEEEEECT
T ss_pred Cc---------------eEecChhhHHHHhcCCCcEEEEEecC
Confidence 88 99999999999998888999999864
No 62
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=99.73 E-value=8.4e-18 Score=133.82 Aligned_cols=101 Identities=23% Similarity=0.517 Sum_probs=90.8
Q ss_pred eEEecc-hhhhhhhc--cCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCCC
Q psy1110 101 VVHLTD-DNFDLVIQ--EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKNG 177 (366)
Q Consensus 101 v~~l~~-~~~~~~i~--~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~G 177 (366)
+..+++ ++|++.++ ++++++|.||++||++|+.+.|.++++++.+...
T Consensus 2 v~~l~~~~~~~~~l~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~----------------------------- 52 (106)
T 1xwb_A 2 VYQVKDKADLDGQLTKASGKLVVLDFFATWCGPCKMISPKLVELSTQFADN----------------------------- 52 (106)
T ss_dssp EEECCSHHHHHHHHHHHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-----------------------------
T ss_pred ceecCCHHHHHHHHHhcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHhCCC-----------------------------
Confidence 567888 89999886 7899999999999999999999999999888655
Q ss_pred cccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccC
Q psy1110 178 EPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSIN 257 (366)
Q Consensus 178 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~ 257 (366)
T Consensus 53 -------------------------------------------------------------------------------- 52 (106)
T 1xwb_A 53 -------------------------------------------------------------------------------- 52 (106)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCC
Q psy1110 258 SGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDP 321 (366)
Q Consensus 258 ~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~ 321 (366)
+.++.+|++.+..++++|+|+++||+++|++|+.+.++.| .+.+.|.+||++.
T Consensus 53 ----------~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~g-~~~~~l~~~i~~~ 105 (106)
T 1xwb_A 53 ----------VVVLKVDVDECEDIAMEYNISSMPTFVFLKNGVKVEEFAG-ANAKRLEDVIKAN 105 (106)
T ss_dssp ----------EEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEEES-CCHHHHHHHHHHT
T ss_pred ----------eEEEEEeccchHHHHHHcCCCcccEEEEEcCCcEEEEEcC-CCHHHHHHHHHHh
Confidence 6788888888889999999999999999999999999999 7889999998764
No 63
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=99.73 E-value=6e-18 Score=135.86 Aligned_cols=100 Identities=22% Similarity=0.363 Sum_probs=86.7
Q ss_pred eEEe-cchhhhhhh--ccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCCC
Q psy1110 101 VVHL-TDDNFDLVI--QEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKNG 177 (366)
Q Consensus 101 v~~l-~~~~~~~~i--~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~G 177 (366)
+..+ +.++|++++ .++++++|+||++||++|+.+.|.++++++.+ .+
T Consensus 3 v~~i~~~~~~~~~~~~~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~-~~----------------------------- 52 (107)
T 1gh2_A 3 VKPVGSDPDFQPELSGAGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKY-PQ----------------------------- 52 (107)
T ss_dssp EEEECSGGGHHHHHHHTTTSCEEEEEECSSCHHHHHHHHHHHHHHHHC-TT-----------------------------
T ss_pred eEEecCHHHHHHHHHhCCCCEEEEEEECCCChhhHHHHHHHHHHHHHC-CC-----------------------------
Confidence 4555 568999988 56899999999999999999999999999887 33
Q ss_pred cccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccC
Q psy1110 178 EPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSIN 257 (366)
Q Consensus 178 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~ 257 (366)
T Consensus 53 -------------------------------------------------------------------------------- 52 (107)
T 1gh2_A 53 -------------------------------------------------------------------------------- 52 (107)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCC
Q psy1110 258 SGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDP 321 (366)
Q Consensus 258 ~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~ 321 (366)
+.++.+|++.+..++++|+|+++||+++|++|+.+.++.|. +.++|.+||++.
T Consensus 53 ----------~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~~ 105 (107)
T 1gh2_A 53 ----------AVFLEVDVHQCQGTAATNNISATPTFQFFRNKVRIDQYQGA-DAVGLEEKIKQH 105 (107)
T ss_dssp ----------SEEEEEETTTSHHHHHHTTCCSSSEEEEEETTEEEEEEESS-CHHHHHHHHHHH
T ss_pred ----------cEEEEEECccCHHHHHhcCCCcccEEEEEECCeEEEEEeCC-CHHHHHHHHHHh
Confidence 67888888888899999999999999999999999999995 456698998754
No 64
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=99.73 E-value=4e-18 Score=134.55 Aligned_cols=102 Identities=23% Similarity=0.425 Sum_probs=91.2
Q ss_pred eEEecchhhhhhhccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCCCccc
Q psy1110 101 VVHLTDDNFDLVIQEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKNGEPT 180 (366)
Q Consensus 101 v~~l~~~~~~~~i~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~G~~~ 180 (366)
|..|+.++|++.++++++++|.||++||++|+.+.|.++++++.+.+
T Consensus 1 V~~l~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~--------------------------------- 47 (104)
T 2e0q_A 1 VIHLDSKNFDSFLASHEIAVVDFWAEWCAPCLILAPIIEELAEDYPQ--------------------------------- 47 (104)
T ss_dssp CEECCTTTHHHHHHHSSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT---------------------------------
T ss_pred CeecCHHHHHHHHhcCCcEEEEEECCCChhHHHHhHHHHHHHHHcCC---------------------------------
Confidence 46789999999998899999999999999999999999999887643
Q ss_pred ccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccCCCC
Q psy1110 181 THPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSINSGS 260 (366)
Q Consensus 181 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~~~~ 260 (366)
T Consensus 48 -------------------------------------------------------------------------------- 47 (104)
T 2e0q_A 48 -------------------------------------------------------------------------------- 47 (104)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCC
Q psy1110 261 FSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPT 322 (366)
Q Consensus 261 ~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~ 322 (366)
+.++.+|++.+..++++|+|+++||+++|++|+.+.++.|.++.+.|.+|+++.+
T Consensus 48 -------~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~l~~~l 102 (104)
T 2e0q_A 48 -------VGFGKLNSDENPDIAARYGVMSLPTVIFFKDGEPVDEIIGAVPREEIEIRIKNLL 102 (104)
T ss_dssp -------SEEEEEETTTCHHHHHHTTCCSSCEEEEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred -------ceEEEEECCCCHHHHHhCCccccCEEEEEECCeEhhhccCCCCHHHHHHHHHHHh
Confidence 4567778888888999999999999999999999999999999999999997654
No 65
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.73 E-value=4.8e-18 Score=141.52 Aligned_cols=111 Identities=29% Similarity=0.598 Sum_probs=95.1
Q ss_pred CCceEEecchhhhhhhc-cCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCC
Q psy1110 98 ESEVVHLTDDNFDLVIQ-EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKN 176 (366)
Q Consensus 98 ~~~v~~l~~~~~~~~i~-~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~ 176 (366)
.+.+..|++++|+..+. ++++++|+||++||++|+.+.|.|+++++.+...
T Consensus 6 ~~~v~~l~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~~---------------------------- 57 (133)
T 2dj3_A 6 SGPVKVVVGKTFDAIVMDPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYKGQ---------------------------- 57 (133)
T ss_dssp SCSSEECCTTTCCCCCTCTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHTTS----------------------------
T ss_pred CCceEEEcCCCHHHHhccCCCcEEEEEECCCChhHHHHHHHHHHHHHHhcCC----------------------------
Confidence 45799999999998875 4899999999999999999999999999998753
Q ss_pred CcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeecccccccccc
Q psy1110 177 GEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSI 256 (366)
Q Consensus 177 G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~ 256 (366)
T Consensus 58 -------------------------------------------------------------------------------- 57 (133)
T 2dj3_A 58 -------------------------------------------------------------------------------- 57 (133)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCcee--eecC-CCCCHHHHHHHHhCCCCCC
Q psy1110 257 NSGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVA--FDAG-HLRDASRLVEFMRDPTEPP 325 (366)
Q Consensus 257 ~~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~--~~~~-g~~~~e~l~~fi~~~~~~~ 325 (366)
.++.++.+|++.+..++.+|+|+++||+++|++|..+ ..+. |.++.+.|.+||++.+...
T Consensus 58 ---------~~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~~~gg~~~~~~l~~~l~~~~~~~ 120 (133)
T 2dj3_A 58 ---------KDLVIAKMDATANDITNDQYKVEGFPTIYFAPSGDKKNPIKFEGGNRDLEHLSKFIDEHATKR 120 (133)
T ss_dssp ---------SSEEEEEECTTTSCCCCSSCCCSSSSEEEEECTTCTTSCEECCSSCCSTTHHHHHHHHHSSSC
T ss_pred ---------CCEEEEEecCCcCHHHHhhcCCCcCCEEEEEeCCCcccceEecCCCcCHHHHHHHHHHhcccc
Confidence 1277888999999999999999999999999887643 3566 6689999999999877543
No 66
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=99.73 E-value=5.3e-18 Score=134.75 Aligned_cols=102 Identities=23% Similarity=0.476 Sum_probs=91.7
Q ss_pred eEEecchhhhhhh-ccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCCCcc
Q psy1110 101 VVHLTDDNFDLVI-QEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKNGEP 179 (366)
Q Consensus 101 v~~l~~~~~~~~i-~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~G~~ 179 (366)
+..+++++|++.+ +++++++|.||++||++|+.+.|.++++++.+.++
T Consensus 2 v~~~~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~------------------------------- 50 (105)
T 1fb6_A 2 VQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYSGK------------------------------- 50 (105)
T ss_dssp CEECCTTTHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-------------------------------
T ss_pred ceechhhhHHHHHhcCCCcEEEEEECCCChHHHHHHHHHHHHHHHhcCc-------------------------------
Confidence 5688999999865 56899999999999999999999999999988665
Q ss_pred cccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccCCC
Q psy1110 180 TTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSINSG 259 (366)
Q Consensus 180 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~~~ 259 (366)
T Consensus 51 -------------------------------------------------------------------------------- 50 (105)
T 1fb6_A 51 -------------------------------------------------------------------------------- 50 (105)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCC
Q psy1110 260 SFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDP 321 (366)
Q Consensus 260 ~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~ 321 (366)
+.++.+|++.+..++++|+|+++||++++++|+.+.++.|..+.+.|.++|++.
T Consensus 51 --------~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~G~~~~~~l~~~l~~~ 104 (105)
T 1fb6_A 51 --------IAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKY 104 (105)
T ss_dssp --------CEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEEEECCCHHHHHHHHHHH
T ss_pred --------eEEEEEcCcchHHHHHhCCCCcccEEEEEeCCeEEEEEecCCCHHHHHHHHHhh
Confidence 667888888888999999999999999999999999999999999999998753
No 67
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=99.73 E-value=2.9e-18 Score=141.94 Aligned_cols=110 Identities=11% Similarity=0.164 Sum_probs=94.0
Q ss_pred eEEecchhhh-----hhhccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecC
Q psy1110 101 VVHLTDDNFD-----LVIQEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNK 175 (366)
Q Consensus 101 v~~l~~~~~~-----~~i~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~ 175 (366)
+..++..+++ ....++++++|.||++||++|+.+.|.++++++.+...
T Consensus 6 ~~~l~~~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~~~~--------------------------- 58 (126)
T 2l57_A 6 IKQINFQSINVVENLEEAKEGIPTIIMFKTDTCPYCVEMQKELSYVSKEREGK--------------------------- 58 (126)
T ss_dssp SSCTTTTCCSEESSTTTCCSSSCEEEEEECSSCHHHHHHHHHHHHHHHHSSSS---------------------------
T ss_pred cCCCCccccchhHHHHHHhCCCcEEEEEECCCCccHHHHHHHHHHHHHHhcCC---------------------------
Confidence 3455555665 55567899999999999999999999999999988654
Q ss_pred CCcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccc
Q psy1110 176 NGEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKS 255 (366)
Q Consensus 176 ~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p 255 (366)
T Consensus 59 -------------------------------------------------------------------------------- 58 (126)
T 2l57_A 59 -------------------------------------------------------------------------------- 58 (126)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCCCCccceeEEEEe--cccccccccccccccCCeEEEec-CCceeeecCCCCCHHHHHHHHhCCCCCCCCCC
Q psy1110 256 INSGSFSPRQITGILAAVD--VTREKSLGKRFDIKGFPTLKYFR-AGSVAFDAGHLRDASRLVEFMRDPTEPPPPPP 329 (366)
Q Consensus 256 ~~~~~~~~~~~~v~~a~vd--~~~~~~l~~~~~I~~~Ptl~~fk-~G~~~~~~~g~~~~e~l~~fi~~~~~~~~~~~ 329 (366)
+.++.+| ++.+..++++|+|+++||+++|+ +|+.+.++.|.++.+.|.+||++...+.++.+
T Consensus 59 ------------v~~~~v~~~~d~~~~~~~~~~v~~~Pt~~~~~~~G~~~~~~~G~~~~~~l~~~l~~~~~~~~~~~ 123 (126)
T 2l57_A 59 ------------FNIYYARLEEEKNIDLAYKYDANIVPTTVFLDKEGNKFYVHQGLMRKNNIETILNSLGVKEGHHH 123 (126)
T ss_dssp ------------CEEEEEETTSSHHHHHHHHTTCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHHHCCCCCCCC
T ss_pred ------------eEEEEEeCCCCchHHHHHHcCCcceeEEEEECCCCCEEEEecCCCCHHHHHHHHHHHhccccccc
Confidence 6677888 88888999999999999999998 99999999999999999999999888775444
No 68
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=99.73 E-value=9.2e-18 Score=135.30 Aligned_cols=104 Identities=22% Similarity=0.441 Sum_probs=92.0
Q ss_pred CceEEe-cchhhhhhhcc----CCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeee
Q psy1110 99 SEVVHL-TDDNFDLVIQE----ESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLR 173 (366)
Q Consensus 99 ~~v~~l-~~~~~~~~i~~----~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~ 173 (366)
+.+..+ +.++|++++.. +++++|.||++||++|+.+.|.|+++++.+.++
T Consensus 2 ~~v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~~------------------------- 56 (112)
T 1ep7_A 2 GSVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGK------------------------- 56 (112)
T ss_dssp CSEEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTTT-------------------------
T ss_pred CcEEEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcCCC-------------------------
Confidence 357788 56899998865 899999999999999999999999999988655
Q ss_pred cCCCcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccc
Q psy1110 174 NKNGEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRI 253 (366)
Q Consensus 174 ~~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~ 253 (366)
T Consensus 57 -------------------------------------------------------------------------------- 56 (112)
T 1ep7_A 57 -------------------------------------------------------------------------------- 56 (112)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCC
Q psy1110 254 KSINSGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPT 322 (366)
Q Consensus 254 ~p~~~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~ 322 (366)
+.++.+|++.+..++++|+|+++||+++|++|+.+.++.|. +.+.|.+||++..
T Consensus 57 --------------~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~~l 110 (112)
T 1ep7_A 57 --------------VIFLKVDVDAVAAVAEAAGITAMPTFHVYKDGVKADDLVGA-SQDKLKALVAKHA 110 (112)
T ss_dssp --------------SEEEEEETTTTHHHHHHHTCCBSSEEEEEETTEEEEEEESC-CHHHHHHHHHHHH
T ss_pred --------------eEEEEEECCchHHHHHHcCCCcccEEEEEECCeEEEEEcCC-CHHHHHHHHHHHh
Confidence 67888888888899999999999999999999999999998 8999999987643
No 69
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=99.73 E-value=3.9e-18 Score=139.96 Aligned_cols=107 Identities=27% Similarity=0.487 Sum_probs=93.7
Q ss_pred CCceEEecchhhhh-hhccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCC
Q psy1110 98 ESEVVHLTDDNFDL-VIQEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKN 176 (366)
Q Consensus 98 ~~~v~~l~~~~~~~-~i~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~ 176 (366)
++.+..|++++|+. +++++++++|+||++||++|+.+.|.|+++++.+.++
T Consensus 2 ~~~v~~l~~~~f~~~~~~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~~~---------------------------- 53 (122)
T 3aps_A 2 PQASIDLTPQTFNEKVLQGKTHWVVDFYAPWCGPCQNFAPEFELLARMIKGK---------------------------- 53 (122)
T ss_dssp CCCSEECCHHHHHHHTTTCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTT----------------------------
T ss_pred CcchhcCCHHHHHHHHhcCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhcCC----------------------------
Confidence 45789999999964 6678899999999999999999999999999998766
Q ss_pred CcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeecccccccccc
Q psy1110 177 GEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSI 256 (366)
Q Consensus 177 G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~ 256 (366)
T Consensus 54 -------------------------------------------------------------------------------- 53 (122)
T 3aps_A 54 -------------------------------------------------------------------------------- 53 (122)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCC----CCHHHHHHHHhCCCC
Q psy1110 257 NSGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHL----RDASRLVEFMRDPTE 323 (366)
Q Consensus 257 ~~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~----~~~e~l~~fi~~~~~ 323 (366)
+.++.+|++.+..++.+|+|+++||+++|++|..+.++.|. ++.+.|.+||++.+.
T Consensus 54 -----------~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l~ 113 (122)
T 3aps_A 54 -----------VRAGKVDCQAYPQTCQKAGIKAYPSVKLYQYERAKKSIWEEQINSRDAKTIAALIYGKLE 113 (122)
T ss_dssp -----------CEEEEEETTTCHHHHHHTTCCSSSEEEEEEEEGGGTEEEEEEECCSCHHHHHHHHHHHHH
T ss_pred -----------eEEEEEeCcCCHHHHHHcCCCccceEEEEeCCCccceeeccccCcCCHHHHHHHHHHHHH
Confidence 67888888888899999999999999999877667777775 899999999987654
No 70
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=99.73 E-value=6.9e-18 Score=136.80 Aligned_cols=101 Identities=24% Similarity=0.435 Sum_probs=89.8
Q ss_pred ceEEecchhhhhhhccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCCCcc
Q psy1110 100 EVVHLTDDNFDLVIQEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKNGEP 179 (366)
Q Consensus 100 ~v~~l~~~~~~~~i~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~G~~ 179 (366)
.....+.++|+++++++++++|+||++||++|+.+.|.|+++++.+.+
T Consensus 8 ~~~~~~~~~f~~~~~~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~~-------------------------------- 55 (109)
T 3f3q_A 8 VTQFKTASEFDSAIAQDKLVVVDFYATWCGPCKMIAPMIEKFSEQYPQ-------------------------------- 55 (109)
T ss_dssp CEECCSHHHHHHHTTSSSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT--------------------------------
T ss_pred ccCCCCHHHHHHHHhcCCEEEEEEECCcCHhHHHHHHHHHHHHHHCCC--------------------------------
Confidence 455667799999999999999999999999999999999999988743
Q ss_pred cccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccCCC
Q psy1110 180 TTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSINSG 259 (366)
Q Consensus 180 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~~~ 259 (366)
T Consensus 56 -------------------------------------------------------------------------------- 55 (109)
T 3f3q_A 56 -------------------------------------------------------------------------------- 55 (109)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCC
Q psy1110 260 SFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDP 321 (366)
Q Consensus 260 ~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~ 321 (366)
+.++.+|++.+..++++|+|+++||+++|++|+.+.++.|. +.+.|.++|+++
T Consensus 56 --------~~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~-~~~~l~~~i~~~ 108 (109)
T 3f3q_A 56 --------ADFYKLDVDELGDVAQKNEVSAMPTLLLFKNGKEVAKVVGA-NPAAIKQAIAAN 108 (109)
T ss_dssp --------SEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEEESS-CHHHHHHHHHHH
T ss_pred --------CEEEEEECCCCHHHHHHcCCCccCEEEEEECCEEEEEEeCC-CHHHHHHHHHhh
Confidence 56788888888999999999999999999999999999998 778999998753
No 71
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=99.73 E-value=1.5e-17 Score=134.46 Aligned_cols=103 Identities=24% Similarity=0.492 Sum_probs=89.8
Q ss_pred CCceEEecchhhhhhhc--cCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecC
Q psy1110 98 ESEVVHLTDDNFDLVIQ--EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNK 175 (366)
Q Consensus 98 ~~~v~~l~~~~~~~~i~--~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~ 175 (366)
.+.+..|++++|++.+. ++++++|+||++||++|+.+.|.|+++++.+.+
T Consensus 4 ~~~v~~l~~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~---------------------------- 55 (111)
T 2pu9_C 4 VGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYLD---------------------------- 55 (111)
T ss_dssp TTSEEEECTTTHHHHHTTCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCTT----------------------------
T ss_pred cCccEEechHHHHHHHHhcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCCC----------------------------
Confidence 45799999999999886 489999999999999999999999999987742
Q ss_pred CCcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccc
Q psy1110 176 NGEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKS 255 (366)
Q Consensus 176 ~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p 255 (366)
T Consensus 56 -------------------------------------------------------------------------------- 55 (111)
T 2pu9_C 56 -------------------------------------------------------------------------------- 55 (111)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCCCCccceeEEEEecc-cccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCC
Q psy1110 256 INSGSFSPRQITGILAAVDVT-REKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDP 321 (366)
Q Consensus 256 ~~~~~~~~~~~~v~~a~vd~~-~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~ 321 (366)
+.++.+|++ .+..++++|+|+++||++++++|+.+.++.|.. .+.|.++|++.
T Consensus 56 ------------v~~~~vd~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~-~~~l~~~l~~~ 109 (111)
T 2pu9_C 56 ------------VIFLKLDCNQENKTLAKELGIRVVPTFKILKENSVVGEVTGAK-YDKLLEAIQAA 109 (111)
T ss_dssp ------------SEEEEEECSSTTHHHHHHHCCSBSSEEEEESSSSEEEEEESSC-HHHHHHHHHHH
T ss_pred ------------eEEEEEecCcchHHHHHHcCCCeeeEEEEEeCCcEEEEEcCCC-HHHHHHHHHHh
Confidence 456777776 677899999999999999999999998999984 88899988753
No 72
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.72 E-value=2.3e-18 Score=145.07 Aligned_cols=106 Identities=21% Similarity=0.422 Sum_probs=91.1
Q ss_pred CCceEEecchhhhhhhccC--CeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecC
Q psy1110 98 ESEVVHLTDDNFDLVIQEE--SSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNK 175 (366)
Q Consensus 98 ~~~v~~l~~~~~~~~i~~~--k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~ 175 (366)
++.+..++.++|++.+..+ ++++|+|||+||++|+.+.|.|+++++++.+.
T Consensus 6 ~~~v~~l~~~~f~~~~~~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~~--------------------------- 58 (137)
T 2dj0_A 6 SGYIKYFNDKTIDEELERDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYNCT--------------------------- 58 (137)
T ss_dssp CSCCEECCTTHHHHHHHHSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHCSS---------------------------
T ss_pred CceEEEccHhhHHHHHhcCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCC---------------------------
Confidence 3568999999999988554 48999999999999999999999999998752
Q ss_pred CCcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccc
Q psy1110 176 NGEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKS 255 (366)
Q Consensus 176 ~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p 255 (366)
T Consensus 59 -------------------------------------------------------------------------------- 58 (137)
T 2dj0_A 59 -------------------------------------------------------------------------------- 58 (137)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCCCCccceeEEEEecccccccccccccc------cCCeEEEecCCceeeecCCCCCHHHHHHHHhCC
Q psy1110 256 INSGSFSPRQITGILAAVDVTREKSLGKRFDIK------GFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDP 321 (366)
Q Consensus 256 ~~~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~------~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~ 321 (366)
++.++.+|++++..++.+|+|+ ++||+++|++|+.+.++.|.++.+.|.+|+.+.
T Consensus 59 -----------~v~~~~vd~~~~~~~~~~~~v~~~~~~~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 119 (137)
T 2dj0_A 59 -----------GLNFGKVDVGRYTDVSTRYKVSTSPLTKQLPTLILFQGGKEAMRRPQIDKKGRAVSWTFSE 119 (137)
T ss_dssp -----------SCEEEECCTTTCHHHHHHTTCCCCSSSSCSSEEEEESSSSEEEEESCBCSSSCBCCCCCCH
T ss_pred -----------CeEEEEEeCccCHHHHHHccCcccCCcCCCCEEEEEECCEEEEEecCcCchHHHHHHHhcc
Confidence 1667888888888888889998 999999999999999999998888877777554
No 73
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=99.72 E-value=5.5e-18 Score=138.82 Aligned_cols=106 Identities=12% Similarity=0.184 Sum_probs=87.1
Q ss_pred ceEEecchhhhhhhccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCCCcc
Q psy1110 100 EVVHLTDDNFDLVIQEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKNGEP 179 (366)
Q Consensus 100 ~v~~l~~~~~~~~i~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~G~~ 179 (366)
.+..++.++|+..+.++++++|+|||+||++|+.+.|.|+++++.+... +..++++..
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~~~~--v~~~~~~~~-------------------- 70 (118)
T 1zma_A 13 DLEVTTVVRAQEALDKKETATFFIGRKTCPYCRKFAGTLSGVVAETKAH--IYFINSEEP-------------------- 70 (118)
T ss_dssp TSEECCHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHCCC--CEEEETTCG--------------------
T ss_pred hhhcCCHHHHHHHHhCCCeEEEEEECCCCccHHHHHHHHHHHHHhcCCe--EEEEECCCc--------------------
Confidence 5788899999999988999999999999999999999999999987644 222222110
Q ss_pred cccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccCCC
Q psy1110 180 TTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSINSG 259 (366)
Q Consensus 180 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~~~ 259 (366)
T Consensus 71 -------------------------------------------------------------------------------- 70 (118)
T 1zma_A 71 -------------------------------------------------------------------------------- 70 (118)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhC
Q psy1110 260 SFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRD 320 (366)
Q Consensus 260 ~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~ 320 (366)
.|+.....++.+|+|+++||+++|++|+.+.++.|.++.+.|.+||+.
T Consensus 71 -------------~~~~~~~~~~~~~~i~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~k 118 (118)
T 1zma_A 71 -------------SQLNDLQAFRSRYGIPTVPGFVHITDGQINVRCDSSMSAQEIKDFAGL 118 (118)
T ss_dssp -------------GGHHHHHHHHHHHTCCSSCEEEEEETTEEEEECCTTCCHHHHHHHHTC
T ss_pred -------------CcHHHHHHHHHHcCCCCCCeEEEEECCEEEEEecCCCCHHHHHHHhhC
Confidence 122344578899999999999999999999999999999999999863
No 74
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=99.72 E-value=1.6e-17 Score=138.78 Aligned_cols=101 Identities=23% Similarity=0.379 Sum_probs=91.5
Q ss_pred ceEEecc-hhhhhhhccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCCCc
Q psy1110 100 EVVHLTD-DNFDLVIQEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKNGE 178 (366)
Q Consensus 100 ~v~~l~~-~~~~~~i~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~G~ 178 (366)
-+..|++ ++|+++++++++++|+||++||++|+.+.|.|+++++.+. +
T Consensus 20 mv~~l~~~~~f~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~-~------------------------------ 68 (125)
T 1r26_A 20 SVVDVYSVEQFRNIMSEDILTVAWFTAVWCGPCKTIERPMEKIAYEFP-T------------------------------ 68 (125)
T ss_dssp CCEEECCHHHHHHHHHSSSCEEEEEECTTCHHHHHTHHHHHHHHHHCT-T------------------------------
T ss_pred ceEECCCHHHHHHHHccCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC-C------------------------------
Confidence 4889999 9999999889999999999999999999999999998873 3
Q ss_pred ccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccCC
Q psy1110 179 PTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSINS 258 (366)
Q Consensus 179 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~~ 258 (366)
T Consensus 69 -------------------------------------------------------------------------------- 68 (125)
T 1r26_A 69 -------------------------------------------------------------------------------- 68 (125)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCC
Q psy1110 259 GSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDP 321 (366)
Q Consensus 259 ~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~ 321 (366)
+.++.+|++.+..++.+|+|+++||+++|++|+.+.++.| .+.+.|.+||++.
T Consensus 69 ---------v~~~~vd~d~~~~l~~~~~v~~~Pt~~i~~~G~~~~~~~G-~~~~~l~~~l~~~ 121 (125)
T 1r26_A 69 ---------VKFAKVDADNNSEIVSKCRVLQLPTFIIARSGKMLGHVIG-ANPGMLRQKLRDI 121 (125)
T ss_dssp ---------SEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEEES-SCHHHHHHHHHHH
T ss_pred ---------CEEEEEECCCCHHHHHHcCCCcccEEEEEeCCeEEEEEeC-CCHHHHHHHHHHH
Confidence 6788888888889999999999999999999999999999 6889999998754
No 75
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=99.72 E-value=1.9e-17 Score=133.87 Aligned_cols=103 Identities=17% Similarity=0.423 Sum_probs=87.6
Q ss_pred eEEecc-hhhhhhhcc---CCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCC
Q psy1110 101 VVHLTD-DNFDLVIQE---ESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKN 176 (366)
Q Consensus 101 v~~l~~-~~~~~~i~~---~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~ 176 (366)
+..+++ ++|++++.+ +++++|+||++||++|+.+.|.++++++.+...
T Consensus 2 v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~~~~---------------------------- 53 (112)
T 3d6i_A 2 VIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEPSNS---------------------------- 53 (112)
T ss_dssp EEEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCGGGT----------------------------
T ss_pred ccccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhcCCC----------------------------
Confidence 678888 999999875 899999999999999999999999999876432
Q ss_pred CcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeecccccccccc
Q psy1110 177 GEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSI 256 (366)
Q Consensus 177 G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~ 256 (366)
T Consensus 54 -------------------------------------------------------------------------------- 53 (112)
T 3d6i_A 54 -------------------------------------------------------------------------------- 53 (112)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCC
Q psy1110 257 NSGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPT 322 (366)
Q Consensus 257 ~~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~ 322 (366)
++.++.+|++.+..++.+|+|+++||+++|++|+.+.++.|. +.++|.++|++..
T Consensus 54 ----------~~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~~~ 108 (112)
T 3d6i_A 54 ----------NVSFLSIDADENSEISELFEISAVPYFIIIHKGTILKELSGA-DPKEYVSLLEDCK 108 (112)
T ss_dssp ----------TSEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEECSC-CHHHHHHHHHHHH
T ss_pred ----------CEEEEEEecccCHHHHHHcCCCcccEEEEEECCEEEEEecCC-CHHHHHHHHHHHH
Confidence 267888999999999999999999999999999999999997 4556888887543
No 76
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=99.71 E-value=9e-18 Score=136.33 Aligned_cols=105 Identities=21% Similarity=0.280 Sum_probs=89.8
Q ss_pred ceEEecchhhhhhhccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCCCcc
Q psy1110 100 EVVHLTDDNFDLVIQEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKNGEP 179 (366)
Q Consensus 100 ~v~~l~~~~~~~~i~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~G~~ 179 (366)
.+..++.++| +.+.++++++|.||++||++|+.+.|.++++++.+. .
T Consensus 4 ~~~~~~~~~f-~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~-~------------------------------- 50 (110)
T 2l6c_A 4 IRDITTEAGM-AHFEGLSDAIVFFHKNLCPHCKNMEKVLDKFGARAP-Q------------------------------- 50 (110)
T ss_dssp CSBCGGGCSH-HHHTTCSEEEEEEECSSCSTHHHHHHHHHHHHTTCT-T-------------------------------
T ss_pred eeecCCHHHH-HHHHcCCCEEEEEECCCCHhHHHHHHHHHHHHHHCC-C-------------------------------
Confidence 3456788899 667778999999999999999999999999887653 2
Q ss_pred cccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccCCC
Q psy1110 180 TTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSINSG 259 (366)
Q Consensus 180 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~~~ 259 (366)
T Consensus 51 -------------------------------------------------------------------------------- 50 (110)
T 2l6c_A 51 -------------------------------------------------------------------------------- 50 (110)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCCCCC
Q psy1110 260 SFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPTEPP 325 (366)
Q Consensus 260 ~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~~~~ 325 (366)
+.++.+|++.+..++++|+|+++||+++|++|+.+.++.|..+.++|.+++.....+.
T Consensus 51 --------v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~v~~~~G~~~~~~l~~~~~~~~~~~ 108 (110)
T 2l6c_A 51 --------VAISSVDSEARPELMKELGFERVPTLVFIRDGKVAKVFSGIMNPRELQALYASIHHHH 108 (110)
T ss_dssp --------SCEEEEEGGGCHHHHHHTTCCSSCEEEEEESSSEEEEEESCCCHHHHHHHHHTC----
T ss_pred --------cEEEEEcCcCCHHHHHHcCCcccCEEEEEECCEEEEEEcCCCCHHHHHHHHHHHhhhc
Confidence 5678888888899999999999999999999999999999999999999999876543
No 77
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=99.71 E-value=1e-17 Score=136.88 Aligned_cols=100 Identities=22% Similarity=0.556 Sum_probs=89.6
Q ss_pred ceEEecc-hhhhhhhc--cCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCC
Q psy1110 100 EVVHLTD-DNFDLVIQ--EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKN 176 (366)
Q Consensus 100 ~v~~l~~-~~~~~~i~--~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~ 176 (366)
.+..+++ ++|+.+++ ++++++|.||++||++|+.+.|.++++++.+ +
T Consensus 14 ~v~~l~~~~~~~~~l~~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~--~---------------------------- 63 (117)
T 2xc2_A 14 ELIELKQDGDLESLLEQHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY--D---------------------------- 63 (117)
T ss_dssp EEEECCSTTHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS--S----------------------------
T ss_pred eeEEeCCHHHHHHHHHhCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc--C----------------------------
Confidence 4888998 99999887 7899999999999999999999999988766 4
Q ss_pred CcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeecccccccccc
Q psy1110 177 GEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSI 256 (366)
Q Consensus 177 G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~ 256 (366)
T Consensus 64 -------------------------------------------------------------------------------- 63 (117)
T 2xc2_A 64 -------------------------------------------------------------------------------- 63 (117)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCC
Q psy1110 257 NSGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDP 321 (366)
Q Consensus 257 ~~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~ 321 (366)
+.++.+|++.+..++++|+|+++||+++|++|+.+.++.| .+.+.|.++|+++
T Consensus 64 -----------~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G-~~~~~l~~~l~~~ 116 (117)
T 2xc2_A 64 -----------AIFVKVDVDKLEETARKYNISAMPTFIAIKNGEKVGDVVG-ASIAKVEDMIKKF 116 (117)
T ss_dssp -----------SEEEEEETTTSHHHHHHTTCCSSSEEEEEETTEEEEEEES-SCHHHHHHHHHHH
T ss_pred -----------cEEEEEECCccHHHHHHcCCCccceEEEEeCCcEEEEEeC-CCHHHHHHHHHHh
Confidence 6678888888889999999999999999999999999999 6888999998753
No 78
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.71 E-value=4.8e-17 Score=150.34 Aligned_cols=147 Identities=24% Similarity=0.417 Sum_probs=106.3
Q ss_pred CCCCCceEEecchhhhhhh-ccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeee
Q psy1110 95 ADTESEVVHLTDDNFDLVI-QEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLR 173 (366)
Q Consensus 95 ~~~~~~v~~l~~~~~~~~i-~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~ 173 (366)
.+..+.+..|++++|+..+ +++++++|+|||+||++|+.+.|.|+++++.+.+.
T Consensus 8 ~~~~~~v~~l~~~~f~~~i~~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~~------------------------- 62 (244)
T 3q6o_A 8 YSPSDPLTLLQADTVRGAVLGSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKAW------------------------- 62 (244)
T ss_dssp SCTTSSSEEECTTTHHHHHSSCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGGG-------------------------
T ss_pred CCCCCCceeCChhhHHHHHhhCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHhc-------------------------
Confidence 3445689999999999866 55699999999999999999999999999999762
Q ss_pred cCCCcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccc
Q psy1110 174 NKNGEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRI 253 (366)
Q Consensus 174 ~~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~ 253 (366)
T Consensus 63 -------------------------------------------------------------------------------- 62 (244)
T 3q6o_A 63 -------------------------------------------------------------------------------- 62 (244)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCCCCCCCccceeEEEEec--ccccccccccccccCCeEEEecCCce-----eeecCCCCCHHHHHHHHhCCCCCCC
Q psy1110 254 KSINSGSFSPRQITGILAAVDV--TREKSLGKRFDIKGFPTLKYFRAGSV-----AFDAGHLRDASRLVEFMRDPTEPPP 326 (366)
Q Consensus 254 ~p~~~~~~~~~~~~v~~a~vd~--~~~~~l~~~~~I~~~Ptl~~fk~G~~-----~~~~~g~~~~e~l~~fi~~~~~~~~ 326 (366)
...+.++.+|| +.+..+|++|+|+++||+++|++|+. ..++.| ++.+.|.++|.+.+....
T Consensus 63 -----------~~~v~~~~vd~~~~~~~~l~~~~~v~~~Pt~~~~~~g~~~~~g~~~~~~g-~~~~~l~~~i~~~l~~~~ 130 (244)
T 3q6o_A 63 -----------RPALYLAALDCAEETNSAVCRDFNIPGFPTVRFFXAFTXNGSGAVFPVAG-ADVQTLRERLIDALESHH 130 (244)
T ss_dssp -----------TTTEEEEEEETTSTTTHHHHHHTTCCSSSEEEEECTTCCSSSCEECCCTT-CCHHHHHHHHHHHHHTCT
T ss_pred -----------cCcEEEEEEeCCchhhHHHHHHcCCCccCEEEEEeCCCcCCCCeeEecCC-CCHHHHHHHHHHHHHhcc
Confidence 11278888898 66889999999999999999987532 226667 699988888876544332
Q ss_pred -CCCCCCCCCCCCCeeEEechhcHHHHhhcc--CceEEEEe
Q psy1110 327 -PPPPEPAWAEEPSEVYHLGADNFASTLRKK--KHALVMFY 364 (366)
Q Consensus 327 -~~~~~~~~~~~~~~v~~lt~~~~~~~~~~~--~~~~v~fy 364 (366)
.+|+.. ..+..++..++.+++..+ +...++|.
T Consensus 131 ~~~p~~~------p~l~~~~~~~l~~~~~~~~~~~~al~f~ 165 (244)
T 3q6o_A 131 DTWPPAC------PPLEPAXLEEIDGFFARNNEEYLALIFE 165 (244)
T ss_dssp TSCCTTS------CCCSCCCHHHHHTHHHHCCCSEEEEEEE
T ss_pred ccCCCCC------CCcccccHHHHHHHhhcCCCceEEEEEE
Confidence 122110 013334566777777443 34444443
No 79
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=99.71 E-value=2e-17 Score=136.27 Aligned_cols=104 Identities=25% Similarity=0.522 Sum_probs=90.6
Q ss_pred CCCceEEecchhhhhhhc--cCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeec
Q psy1110 97 TESEVVHLTDDNFDLVIQ--EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRN 174 (366)
Q Consensus 97 ~~~~v~~l~~~~~~~~i~--~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~ 174 (366)
..+.+..+++++|++.+. ++++++|.||++||++|+.+.|.++++++.+. +
T Consensus 16 ~~~~v~~l~~~~~~~~~~~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~-~-------------------------- 68 (124)
T 1faa_A 16 IVGKVTEVNKDTFWPIVKAAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL-D-------------------------- 68 (124)
T ss_dssp TTTSEEEECTTTHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-T--------------------------
T ss_pred cCCceEEecchhHHHHHHhcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCC-C--------------------------
Confidence 356799999999998885 68999999999999999999999999998875 2
Q ss_pred CCCcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeecccccccc
Q psy1110 175 KNGEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIK 254 (366)
Q Consensus 175 ~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~ 254 (366)
T Consensus 69 -------------------------------------------------------------------------------- 68 (124)
T 1faa_A 69 -------------------------------------------------------------------------------- 68 (124)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCCCCCCccceeEEEEecc-cccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCC
Q psy1110 255 SINSGSFSPRQITGILAAVDVT-REKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDP 321 (366)
Q Consensus 255 p~~~~~~~~~~~~v~~a~vd~~-~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~ 321 (366)
+.++.+|++ .+..++++|+|+++||++++++|+.+.++.|.. .++|.++|++.
T Consensus 69 -------------~~~~~vd~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~-~~~l~~~i~~~ 122 (124)
T 1faa_A 69 -------------VIFLKLDCNQENKTLAKELGIRVVPTFKILKENSVVGEVTGAK-YDKLLEAIQAA 122 (124)
T ss_dssp -------------SEEEEEECSSTTHHHHHHHCCSSSSEEEEEETTEEEEEEESSC-HHHHHHHHHHH
T ss_pred -------------CEEEEEecCcchHHHHHHcCCCeeeEEEEEeCCcEEEEEcCCC-HHHHHHHHHHh
Confidence 456777776 577889999999999999999999999999986 88999998754
No 80
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=99.71 E-value=1.5e-17 Score=143.23 Aligned_cols=100 Identities=15% Similarity=0.227 Sum_probs=88.9
Q ss_pred Eecchhhhhhh--ccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCCCccc
Q psy1110 103 HLTDDNFDLVI--QEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKNGEPT 180 (366)
Q Consensus 103 ~l~~~~~~~~i--~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~G~~~ 180 (366)
..+.++|+..+ +++++++|+|||+||++|+.+.|.++++++.+.+.
T Consensus 8 i~~~~~~~~~i~~~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~~~-------------------------------- 55 (149)
T 3gix_A 8 LTSKKEVDQAIKSTAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLSKM-------------------------------- 55 (149)
T ss_dssp ECSHHHHHHHHHHCCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTTTT--------------------------------
T ss_pred cCCHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHccCc--------------------------------
Confidence 34678899877 45899999999999999999999999999887665
Q ss_pred ccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccCCCC
Q psy1110 181 THPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSINSGS 260 (366)
Q Consensus 181 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~~~~ 260 (366)
T Consensus 56 -------------------------------------------------------------------------------- 55 (149)
T 3gix_A 56 -------------------------------------------------------------------------------- 55 (149)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCccceeEEEEecccccccccccccccCCeEEEecCCcee---------eecCC-CCCHHHHHHHHhCC
Q psy1110 261 FSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVA---------FDAGH-LRDASRLVEFMRDP 321 (366)
Q Consensus 261 ~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~---------~~~~g-~~~~e~l~~fi~~~ 321 (366)
+.++++|++++..++.+|+|+++||+++|++|+.+ .++.| ..+.++|.++|+..
T Consensus 56 -------~~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~ 119 (149)
T 3gix_A 56 -------AAIYLVDVDQTAVYTQYFDISYIPSTVFFFNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVI 119 (149)
T ss_dssp -------EEEEEEETTTCCHHHHHTTCCSSSEEEEEETTEEEEEECSSSCCSCEESCCSSHHHHHHHHHHH
T ss_pred -------eEEEEEECCcCHHHHHHcCCCccCeEEEEECCeEEEeecCCCCCCeEeeecCCHHHHHHHHHHH
Confidence 67888888889999999999999999999999988 88899 89999999988755
No 81
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=99.70 E-value=1.6e-17 Score=140.26 Aligned_cols=105 Identities=28% Similarity=0.434 Sum_probs=80.5
Q ss_pred CceEEecchhhhhhhccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCCCc
Q psy1110 99 SEVVHLTDDNFDLVIQEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKNGE 178 (366)
Q Consensus 99 ~~v~~l~~~~~~~~i~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~G~ 178 (366)
+.+..|++++|+..+..++.++|+||++||++|+.+.|.|+++++.+.++
T Consensus 33 ~~v~~l~~~~~~~~~~~~~~vvv~f~~~~C~~C~~~~~~l~~l~~~~~~~------------------------------ 82 (140)
T 1v98_A 33 PWVVEADEKGFAQEVAGAPLTLVDFFAPWCGPCRLVSPILEELARDHAGR------------------------------ 82 (140)
T ss_dssp ----------------CCCEEEEEEECTTCHHHHHHHHHHHHHHHHTTTT------------------------------
T ss_pred CccccCCHHHHHHHHHcCCCEEEEEECCCCHHHHHHHHHHHHHHHHccCc------------------------------
Confidence 46788999999988755444999999999999999999999999988765
Q ss_pred ccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccCC
Q psy1110 179 PTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSINS 258 (366)
Q Consensus 179 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~~ 258 (366)
T Consensus 83 -------------------------------------------------------------------------------- 82 (140)
T 1v98_A 83 -------------------------------------------------------------------------------- 82 (140)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCC
Q psy1110 259 GSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPT 322 (366)
Q Consensus 259 ~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~ 322 (366)
+.++.+|++.+..++.+|+|+++||+++|++|+.+.++.|.++.+.|.+||++.+
T Consensus 83 ---------v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~i~~~l 137 (140)
T 1v98_A 83 ---------LKVVKVNVDEHPGLAARYGVRSVPTLVLFRRGAPVATWVGASPRRVLEERLRPYL 137 (140)
T ss_dssp ---------EEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred ---------eEEEEEECCCCHHHHHHCCCCccCEEEEEeCCcEEEEEeCCCCHHHHHHHHHHHH
Confidence 6788888888889999999999999999999999999999999999999998654
No 82
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=99.70 E-value=4.9e-18 Score=145.74 Aligned_cols=106 Identities=16% Similarity=0.229 Sum_probs=80.3
Q ss_pred ceEEecchhhhhhhccCCeEEEEEECCC--ChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCCC
Q psy1110 100 EVVHLTDDNFDLVIQEESSVLVMFYAPW--CGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKNG 177 (366)
Q Consensus 100 ~v~~l~~~~~~~~i~~~k~vlV~F~a~w--C~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~G 177 (366)
++..|++++|++++.+++.++|.||++| |++|+.+.|.|++++++| ++
T Consensus 18 ~~~~l~~~~f~~~i~~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~-~~----------------------------- 67 (142)
T 2es7_A 18 GWQPVEASTVDDWIKRVGDGVILLSSDPRRTPEVSDNPVMIAELLREF-PQ----------------------------- 67 (142)
T ss_dssp TCEECCCC--------CCSEEEEECCCSCC----CCHHHHHHHHHHTC-TT-----------------------------
T ss_pred cCcccccccHHHHHHhCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh-cc-----------------------------
Confidence 5789999999999988788999999987 999999999999999988 55
Q ss_pred cccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccC
Q psy1110 178 EPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSIN 257 (366)
Q Consensus 178 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~ 257 (366)
T Consensus 68 -------------------------------------------------------------------------------- 67 (142)
T 2es7_A 68 -------------------------------------------------------------------------------- 67 (142)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCcccee--EEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCCCCC
Q psy1110 258 SGSFSPRQITGI--LAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPTEPP 325 (366)
Q Consensus 258 ~~~~~~~~~~v~--~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~~~~ 325 (366)
+. ++++|++++..++.+|+|+++||+++|++|+.+.++.|.++.+.|.+||++...++
T Consensus 68 ----------v~~~~~~Vd~d~~~~la~~~~V~~iPT~~~fk~G~~v~~~~G~~~~~~l~~~i~~~l~~~ 127 (142)
T 2es7_A 68 ----------FDWQVAVADLEQSEAIGDRFNVRRFPATLVFTDGKLRGALSGIHPWAELLTLMRSIVDTP 127 (142)
T ss_dssp ----------SCCEEEEECHHHHHHHHHTTTCCSSSEEEEESCC----CEESCCCHHHHHHHHHHHHC--
T ss_pred ----------cceeEEEEECCCCHHHHHhcCCCcCCeEEEEeCCEEEEEEeCCCCHHHHHHHHHHHhccc
Confidence 56 88899999999999999999999999999999999999999999999999877654
No 83
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=99.70 E-value=2.7e-17 Score=130.40 Aligned_cols=99 Identities=21% Similarity=0.489 Sum_probs=87.7
Q ss_pred EEecc-hhhhhhhc--cCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCCCc
Q psy1110 102 VHLTD-DNFDLVIQ--EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKNGE 178 (366)
Q Consensus 102 ~~l~~-~~~~~~i~--~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~G~ 178 (366)
..+++ ++|++.+. ++++++|.||++||++|+.+.|.++++++.+. +
T Consensus 2 ~~i~~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~-~------------------------------ 50 (104)
T 2vim_A 2 RVLATAADLEKLINENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEIP-E------------------------------ 50 (104)
T ss_dssp EECCSHHHHHHHHHTTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-T------------------------------
T ss_pred eecCCHHHHHHHHHhcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHCC-C------------------------------
Confidence 45666 88999887 68999999999999999999999999988774 4
Q ss_pred ccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccCC
Q psy1110 179 PTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSINS 258 (366)
Q Consensus 179 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~~ 258 (366)
T Consensus 51 -------------------------------------------------------------------------------- 50 (104)
T 2vim_A 51 -------------------------------------------------------------------------------- 50 (104)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCC
Q psy1110 259 GSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDP 321 (366)
Q Consensus 259 ~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~ 321 (366)
+.++.+|++.+..++++|+|+++||+++|++|+.+.++.| .+.+.|.+||+++
T Consensus 51 ---------~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~G-~~~~~l~~~l~~~ 103 (104)
T 2vim_A 51 ---------VEFAKVDVDQNEEAAAKYSVTAMPTFVFIKDGKEVDRFSG-ANETKLRETITRH 103 (104)
T ss_dssp ---------SEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEEES-SCHHHHHHHHHHH
T ss_pred ---------CEEEEEeccCCHHHHHHcCCccccEEEEEeCCcEEEEEeC-CCHHHHHHHHHhh
Confidence 6678888888889999999999999999999999999999 6899999998753
No 84
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=99.69 E-value=3.1e-17 Score=130.45 Aligned_cols=96 Identities=23% Similarity=0.490 Sum_probs=85.9
Q ss_pred cchhhhhhhc--cCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCCCccccc
Q psy1110 105 TDDNFDLVIQ--EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKNGEPTTH 182 (366)
Q Consensus 105 ~~~~~~~~i~--~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~G~~~~~ 182 (366)
+.++|++.++ ++++++|.||++||++|+.+.|.++++++.+.+
T Consensus 7 ~~~~~~~~l~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~----------------------------------- 51 (105)
T 3m9j_A 7 SKTAFQEALDAAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYSN----------------------------------- 51 (105)
T ss_dssp SHHHHHHHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHSTT-----------------------------------
T ss_pred CHHHHHHHHHhcCCCeEEEEEECCCChhhHHHHHHHHHHHHHccC-----------------------------------
Confidence 5678888887 789999999999999999999999999987743
Q ss_pred CCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccCCCCCC
Q psy1110 183 PSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSINSGSFS 262 (366)
Q Consensus 183 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~~~~~~ 262 (366)
T Consensus 52 -------------------------------------------------------------------------------- 51 (105)
T 3m9j_A 52 -------------------------------------------------------------------------------- 51 (105)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCC
Q psy1110 263 PRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDP 321 (366)
Q Consensus 263 ~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~ 321 (366)
+.++.+|++.+..++++|+|+++||+++|++|+.+.++.|. +.+.|.+|+++.
T Consensus 52 -----~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~l~~~ 104 (105)
T 3m9j_A 52 -----VIFLEVDVDDCQDVASESEVKSMPTFQFFKKGQKVGEFSGA-NKEKLEATINEL 104 (105)
T ss_dssp -----SEEEEEETTTCHHHHHHTTCCBSSEEEEEETTEEEEEEESS-CHHHHHHHHHHH
T ss_pred -----eEEEEEEhhhhHHHHHHcCCCcCcEEEEEECCeEEEEEeCC-CHHHHHHHHHHh
Confidence 56778888888899999999999999999999999999998 999999998753
No 85
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=99.69 E-value=3.4e-17 Score=134.17 Aligned_cols=101 Identities=21% Similarity=0.455 Sum_probs=87.7
Q ss_pred CceEEecc-hhhhhhhccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCCC
Q psy1110 99 SEVVHLTD-DNFDLVIQEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKNG 177 (366)
Q Consensus 99 ~~v~~l~~-~~~~~~i~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~G 177 (366)
+.+..+++ ++|+.+++++++++|+||++||++|+.+.|.|+++++.+.+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~~------------------------------ 61 (114)
T 2oe3_A 12 TSITKLTNLTEFRNLIKQNDKLVIDFYATWCGPCKMMQPHLTKLIQAYPD------------------------------ 61 (114)
T ss_dssp GGSCBCCSHHHHHHHHHHCSEEEEEEECTTCHHHHHTHHHHHHHHHHCTT------------------------------
T ss_pred hheeecCCHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC------------------------------
Confidence 34556655 66778888899999999999999999999999999887643
Q ss_pred cccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccC
Q psy1110 178 EPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSIN 257 (366)
Q Consensus 178 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~ 257 (366)
T Consensus 62 -------------------------------------------------------------------------------- 61 (114)
T 2oe3_A 62 -------------------------------------------------------------------------------- 61 (114)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhC
Q psy1110 258 SGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRD 320 (366)
Q Consensus 258 ~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~ 320 (366)
+.++.+|++.+..++++|+|+++||+++|++|+.+.++.|.. .+.|.++|++
T Consensus 62 ----------v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 62 ----------VRFVKCDVDESPDIAKECEVTAMPTFVLGKDGQLIGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp ----------SEEEEEETTTCHHHHHHTTCCSBSEEEEEETTEEEEEEESSC-HHHHHHHHHT
T ss_pred ----------CEEEEEECCCCHHHHHHCCCCcccEEEEEeCCeEEEEEeCCC-HHHHHHHHHh
Confidence 457778888888899999999999999999999999999988 8999999875
No 86
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=99.69 E-value=1.2e-16 Score=133.04 Aligned_cols=100 Identities=11% Similarity=0.145 Sum_probs=82.9
Q ss_pred CceEEecchhhhhhhc-cCC--eEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecC
Q psy1110 99 SEVVHLTDDNFDLVIQ-EES--SVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNK 175 (366)
Q Consensus 99 ~~v~~l~~~~~~~~i~-~~k--~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~ 175 (366)
+.+.+++.++|.+.+. +++ +++|+|||+||++|+.+.|.++++|++|. +
T Consensus 3 G~v~~it~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~-~--------------------------- 54 (118)
T 3evi_A 3 GELREISGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFP-E--------------------------- 54 (118)
T ss_dssp CSCEECCGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCT-T---------------------------
T ss_pred cceEEeCHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCC-C---------------------------
Confidence 3678899999998664 333 89999999999999999999999999874 3
Q ss_pred CCcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccc
Q psy1110 176 NGEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKS 255 (366)
Q Consensus 176 ~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p 255 (366)
T Consensus 55 -------------------------------------------------------------------------------- 54 (118)
T 3evi_A 55 -------------------------------------------------------------------------------- 54 (118)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCC-------CHHHHHHHHhCC
Q psy1110 256 INSGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLR-------DASRLVEFMRDP 321 (366)
Q Consensus 256 ~~~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~-------~~e~l~~fi~~~ 321 (366)
+.|+++|.++. ..+|+|+++||+++|++|+.+.+..|.. +.+.|-.+|.+.
T Consensus 55 ------------v~f~kvd~d~~---~~~~~v~~~PT~~~fk~G~~v~~~~G~~~~gg~~~~~~~le~~L~~~ 112 (118)
T 3evi_A 55 ------------TKFVKAIVNSC---IQHYHDNCLPTIFVYKNGQIEAKFIGIIECGGINLKLEELEWKLAEV 112 (118)
T ss_dssp ------------SEEEEEEGGGT---STTCCGGGCSEEEEEETTEEEEEEESTTTTTCSSCCHHHHHHHHHTT
T ss_pred ------------CEEEEEEhHHh---HHHCCCCCCCEEEEEECCEEEEEEeChhhhCCCCCCHHHHHHHHHHc
Confidence 56777777754 5789999999999999999998887764 567777777664
No 87
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=99.69 E-value=5.7e-17 Score=134.77 Aligned_cols=105 Identities=22% Similarity=0.443 Sum_probs=90.8
Q ss_pred CCCceEEe-cchhhhhhhc----cCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeee
Q psy1110 97 TESEVVHL-TDDNFDLVIQ----EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSS 171 (366)
Q Consensus 97 ~~~~v~~l-~~~~~~~~i~----~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~ 171 (366)
..+.+..| +.++|++.+. ++++++|+||++||++|+.+.|.|+++++.+. +
T Consensus 14 ~~~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~----------------------- 69 (124)
T 1xfl_A 14 EEGQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLP-N----------------------- 69 (124)
T ss_dssp CCSCCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHCS-S-----------------------
T ss_pred CCCcEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-C-----------------------
Confidence 34567777 6689998775 48999999999999999999999999998874 4
Q ss_pred eecCCCcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccc
Q psy1110 172 LRNKNGEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGK 251 (366)
Q Consensus 172 l~~~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~ 251 (366)
T Consensus 70 -------------------------------------------------------------------------------- 69 (124)
T 1xfl_A 70 -------------------------------------------------------------------------------- 69 (124)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccCCCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCC
Q psy1110 252 RIKSINSGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPT 322 (366)
Q Consensus 252 ~~~p~~~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~ 322 (366)
+.++.+|++.+..++++|+|+++||+++|++|+.+.++.| .+.+.|.++|++.+
T Consensus 70 ----------------v~~~~vd~d~~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G-~~~~~l~~~l~~~l 123 (124)
T 1xfl_A 70 ----------------VLFLKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVG-AKKDELQSTIAKHL 123 (124)
T ss_dssp ----------------EEEEEEETTTSHHHHHHTTCCSSSEEEEEETTEEEEEEES-CCHHHHHHHHHHHC
T ss_pred ----------------cEEEEEECccCHHHHHHcCCCccCEEEEEECCEEEEEEeC-CCHHHHHHHHHHhc
Confidence 6778888888889999999999999999999999999999 48899999987643
No 88
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=99.68 E-value=4e-17 Score=133.88 Aligned_cols=103 Identities=19% Similarity=0.429 Sum_probs=90.6
Q ss_pred CceEEecchhhhhhhc----cCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeec
Q psy1110 99 SEVVHLTDDNFDLVIQ----EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRN 174 (366)
Q Consensus 99 ~~v~~l~~~~~~~~i~----~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~ 174 (366)
..+..++.++|+..+. ++++++|.||++||++|+.+.|.|+++++.+.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~~--------------------------- 65 (122)
T 2vlu_A 13 EVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFPN--------------------------- 65 (122)
T ss_dssp CCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCTT---------------------------
T ss_pred cceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCC---------------------------
Confidence 4677889999998774 489999999999999999999999999887643
Q ss_pred CCCcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeecccccccc
Q psy1110 175 KNGEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIK 254 (366)
Q Consensus 175 ~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~ 254 (366)
T Consensus 66 -------------------------------------------------------------------------------- 65 (122)
T 2vlu_A 66 -------------------------------------------------------------------------------- 65 (122)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCC
Q psy1110 255 SINSGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPT 322 (366)
Q Consensus 255 p~~~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~ 322 (366)
+.++.+|++.+..++++|+|+++||+++|++|+.+.++.|.. .+.|.+||++.+
T Consensus 66 -------------~~~~~vd~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~-~~~l~~~l~~~l 119 (122)
T 2vlu_A 66 -------------AVFLKVDVDELKPIAEQFSVEAMPTFLFMKEGDVKDRVVGAI-KEELTAKVGLHA 119 (122)
T ss_dssp -------------SEEEEEETTTCHHHHHHTTCCSSSEEEEEETTEEEEEEESSC-HHHHHHHHHHHH
T ss_pred -------------cEEEEEECCCCHHHHHHcCCCcccEEEEEeCCEEEEEEeCcC-HHHHHHHHHHHh
Confidence 457778888888899999999999999999999999999998 999999998654
No 89
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=99.68 E-value=1.9e-17 Score=139.49 Aligned_cols=114 Identities=16% Similarity=0.236 Sum_probs=93.6
Q ss_pred CCceEEecchhhhhhhccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCCC
Q psy1110 98 ESEVVHLTDDNFDLVIQEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKNG 177 (366)
Q Consensus 98 ~~~v~~l~~~~~~~~i~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~G 177 (366)
.+.+..++.++|++.+++ +++|+|||+||++|+.+.|.|+++++.+. +.|+.+|+++..+.
T Consensus 15 ~~~v~~l~~~~~~~~~~~--~vlv~F~a~wC~~C~~~~p~l~~l~~~~~--v~~~~vd~~~~~~~--------------- 75 (135)
T 3emx_A 15 DGRLIYITPEEFRQLLQG--DAILAVYSKTCPHCHRDWPQLIQASKEVD--VPIVMFIWGSLIGE--------------- 75 (135)
T ss_dssp TTEEEECCHHHHHHHHTS--SEEEEEEETTCHHHHHHHHHHHHHHTTCC--SCEEEEEECTTCCH---------------
T ss_pred cCceeecCHHHHHHHhCC--cEEEEEECCcCHhhhHhChhHHHHHHHCC--CEEEEEECCCchhh---------------
Confidence 457899999999999976 99999999999999999999999998775 66666665442210
Q ss_pred cccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccC
Q psy1110 178 EPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSIN 257 (366)
Q Consensus 178 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~ 257 (366)
T Consensus 76 -------------------------------------------------------------------------------- 75 (135)
T 3emx_A 76 -------------------------------------------------------------------------------- 75 (135)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCCCCC
Q psy1110 258 SGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPTEPP 325 (366)
Q Consensus 258 ~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~~~~ 325 (366)
.+.+.+..++++|+|+++||+++|++|+.+.++.|..+.+.+.+++++...++
T Consensus 76 ---------------~~~d~~~~l~~~~~v~~~Pt~~~~~~G~~v~~~~G~~~~~~~~~~i~~~~~~~ 128 (135)
T 3emx_A 76 ---------------RELSAARLEMNKAGVEGTPTLVFYKEGRIVDKLVGATPWSLKVEKAREIYGGE 128 (135)
T ss_dssp ---------------HHHHHHHHHHHHHTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHC---
T ss_pred ---------------hhhhhhHHHHHHcCCceeCeEEEEcCCEEEEEEeCCCCHHHHHHHHHHHhCCC
Confidence 01155678899999999999999999999999999999999999999887654
No 90
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=99.68 E-value=5.5e-17 Score=136.41 Aligned_cols=107 Identities=21% Similarity=0.369 Sum_probs=92.3
Q ss_pred CCceEEec-chhhhhhhc----cCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeee
Q psy1110 98 ESEVVHLT-DDNFDLVIQ----EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSL 172 (366)
Q Consensus 98 ~~~v~~l~-~~~~~~~i~----~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l 172 (366)
.+.+..++ .++|++.+. ++++++|.||++||++|+.+.|.|+++++.+. +
T Consensus 23 ~~~~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~~-~------------------------ 77 (139)
T 3d22_A 23 GGNVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENYP-S------------------------ 77 (139)
T ss_dssp CTTCEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-T------------------------
T ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC-C------------------------
Confidence 44566665 689998773 48999999999999999999999999998873 3
Q ss_pred ecCCCcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeecccccc
Q psy1110 173 RNKNGEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKR 252 (366)
Q Consensus 173 ~~~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~ 252 (366)
T Consensus 78 -------------------------------------------------------------------------------- 77 (139)
T 3d22_A 78 -------------------------------------------------------------------------------- 77 (139)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCCCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCCCCC
Q psy1110 253 IKSINSGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPTEPP 325 (366)
Q Consensus 253 ~~p~~~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~~~~ 325 (366)
+.++.+|++.+..++++|+|+++||+++|++|+.+.++.|. +.+.|.++|.+.....
T Consensus 78 ---------------v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~~~~~~ 134 (139)
T 3d22_A 78 ---------------LMFLVIDVDELSDFSASWEIKATPTFFFLRDGQQVDKLVGA-NKPELHKKITAILDSL 134 (139)
T ss_dssp ---------------SEEEEEETTTSHHHHHHTTCCEESEEEEEETTEEEEEEESC-CHHHHHHHHHHHHHTS
T ss_pred ---------------CEEEEEeCcccHHHHHHcCCCcccEEEEEcCCeEEEEEeCC-CHHHHHHHHHHHhccC
Confidence 56788888888899999999999999999999999999998 8899999998877654
No 91
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=99.67 E-value=6.6e-17 Score=133.41 Aligned_cols=105 Identities=25% Similarity=0.484 Sum_probs=92.0
Q ss_pred CceEEecc-hhhhhhhccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCCC
Q psy1110 99 SEVVHLTD-DNFDLVIQEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKNG 177 (366)
Q Consensus 99 ~~v~~l~~-~~~~~~i~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~G 177 (366)
+.+..+++ ++|+++++++++++|.||++||++|+.+.|.|+++++.+.+.
T Consensus 15 ~~~~~i~~~~~f~~~l~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~~----------------------------- 65 (121)
T 2j23_A 15 GSVQVISSYDQFKQVTGGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAGD----------------------------- 65 (121)
T ss_dssp CCEEECCSHHHHHHHHSSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHHH-----------------------------
T ss_pred cceEEcCCHHHHHHHHcCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcCC-----------------------------
Confidence 45667766 899999988999999999999999999999999998877553
Q ss_pred cccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccC
Q psy1110 178 EPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSIN 257 (366)
Q Consensus 178 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~ 257 (366)
T Consensus 66 -------------------------------------------------------------------------------- 65 (121)
T 2j23_A 66 -------------------------------------------------------------------------------- 65 (121)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCC
Q psy1110 258 SGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPT 322 (366)
Q Consensus 258 ~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~ 322 (366)
++.++.+|++.+..++++|+|+++||+++|++|+.+.++.|. +.+.|.+||++.+
T Consensus 66 ---------~v~~~~vd~d~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~~l 120 (121)
T 2j23_A 66 ---------KVGFYKVDVDEQSQIAQEVGIRAMPTFVFFKNGQKIDTVVGA-DPSKLQAAITQHS 120 (121)
T ss_dssp ---------HSEEEEEETTTCHHHHHHHTCCSSSEEEEEETTEEEEEEESS-CHHHHHHHHHHHT
T ss_pred ---------cEEEEEEECcCCHHHHHHcCCCcccEEEEEECCeEEeeEcCC-CHHHHHHHHHHhh
Confidence 166788888888899999999999999999999999999998 9999999997643
No 92
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=99.67 E-value=2.2e-16 Score=134.81 Aligned_cols=98 Identities=17% Similarity=0.286 Sum_probs=81.8
Q ss_pred cchhhhhhh-c-cCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCCCccccc
Q psy1110 105 TDDNFDLVI-Q-EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKNGEPTTH 182 (366)
Q Consensus 105 ~~~~~~~~i-~-~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~G~~~~~ 182 (366)
+.++|+..+ + ++++++|+|||+||++|+.+.|.++++++.+.+.
T Consensus 10 ~~~~~~~~v~~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~~~---------------------------------- 55 (142)
T 1qgv_A 10 NGWQVDQAILSEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVKNF---------------------------------- 55 (142)
T ss_dssp SHHHHHHHHHTCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTT----------------------------------
T ss_pred CHHHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhCCC----------------------------------
Confidence 568898755 3 5899999999999999999999999999998665
Q ss_pred CCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccCCCCCC
Q psy1110 183 PSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSINSGSFS 262 (366)
Q Consensus 183 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~~~~~~ 262 (366)
T Consensus 56 -------------------------------------------------------------------------------- 55 (142)
T 1qgv_A 56 -------------------------------------------------------------------------------- 55 (142)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCccceeEEEEecccccccccccccccCCeEEEecCCceee---------ecCCCCC-HHHHHHHHhCC
Q psy1110 263 PRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAF---------DAGHLRD-ASRLVEFMRDP 321 (366)
Q Consensus 263 ~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~---------~~~g~~~-~e~l~~fi~~~ 321 (366)
+.++.+|++++..++.+|+|+++||+++|++|+.+. +..|..+ .++|.++|++.
T Consensus 56 -----v~~~~vd~d~~~~~~~~~~i~~~Pt~~~~~~G~~v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~ 119 (142)
T 1qgv_A 56 -----AVIYLVDITEVPDFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETV 119 (142)
T ss_dssp -----EEEEEEETTTCCTTTTSSCSCSSCEEEEEETTEEEEEECC------CCSCCSCHHHHHHHHHHH
T ss_pred -----eEEEEEccccCHHHHHHcCCCCCCEEEEEECCcEEEEecCCCCcceeeeecCcHHHHHHHHHHH
Confidence 678888888888999999999999999999999775 3445443 77788887654
No 93
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=99.66 E-value=1e-16 Score=130.07 Aligned_cols=104 Identities=21% Similarity=0.432 Sum_probs=90.7
Q ss_pred CceEEe-cchhhhhhhcc----CCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeee
Q psy1110 99 SEVVHL-TDDNFDLVIQE----ESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLR 173 (366)
Q Consensus 99 ~~v~~l-~~~~~~~~i~~----~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~ 173 (366)
+.+..+ +.++|++.+.. +++++|.||++||++|+.+.|.|+++++.+. +
T Consensus 6 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~------------------------- 59 (118)
T 2vm1_A 6 GAVIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP-G------------------------- 59 (118)
T ss_dssp CCEEECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT-T-------------------------
T ss_pred CceEEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC-C-------------------------
Confidence 467777 56899988854 8999999999999999999999999998875 3
Q ss_pred cCCCcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccc
Q psy1110 174 NKNGEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRI 253 (366)
Q Consensus 174 ~~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~ 253 (366)
T Consensus 60 -------------------------------------------------------------------------------- 59 (118)
T 2vm1_A 60 -------------------------------------------------------------------------------- 59 (118)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCCC
Q psy1110 254 KSINSGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPTE 323 (366)
Q Consensus 254 ~p~~~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~~ 323 (366)
+.++.+|++.+..++.+|+|+++||+++|++|+.+.++.| .+.+.|.++|.+...
T Consensus 60 --------------~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g-~~~~~l~~~l~~~~~ 114 (118)
T 2vm1_A 60 --------------AIFLKVDVDELKDVAEAYNVEAMPTFLFIKDGEKVDSVVG-GRKDDIHTKIVALMG 114 (118)
T ss_dssp --------------SEEEEEETTTSHHHHHHTTCCSBSEEEEEETTEEEEEEES-CCHHHHHHHHHHHHC
T ss_pred --------------cEEEEEEcccCHHHHHHcCCCcCcEEEEEeCCeEEEEecC-CCHHHHHHHHHHHhc
Confidence 5678888888889999999999999999999999988999 588999999987664
No 94
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=99.66 E-value=8.3e-17 Score=146.69 Aligned_cols=86 Identities=8% Similarity=0.014 Sum_probs=73.1
Q ss_pred eeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCCCCCCCCCCCCCCCCCCCeeEEechh
Q psy1110 268 GILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPTEPPPPPPPEPAWAEEPSEVYHLGAD 347 (366)
Q Consensus 268 v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~~~~~~~~~~~~~~~~~~~v~~lt~~ 347 (366)
+.++++||+.+.++|.+|+|+++|||++|++|....+|.|.++.+++.+|+....... +.+.+|+.+
T Consensus 60 v~~~~vd~~~~~~l~~~~~v~~~Ptl~~~~~~~~~~~~~G~~~~~~l~~~~~~~~~~~-------------~~~~~l~~~ 126 (229)
T 2ywm_A 60 IKLDIYSPFTHKEETEKYGVDRVPTIVIEGDKDYGIRYIGLPAGLEFTTLINGIFHVS-------------QRKPQLSEK 126 (229)
T ss_dssp EEEEEECTTTCHHHHHHTTCCBSSEEEEESSSCCCEEEESCCCTTHHHHHHHHHHHHH-------------TTCCSCCHH
T ss_pred eEEEEecCcccHHHHHHcCCCcCcEEEEECCCcccceecCCccHHHHHHHHHHHHhcc-------------CCccCCCHH
Confidence 7899999999999999999999999999998888899999999999999998754311 115678999
Q ss_pred cHHHHhhccCce-EEEEecC
Q psy1110 348 NFASTLRKKKHA-LVMFYAP 366 (366)
Q Consensus 348 ~~~~~~~~~~~~-~v~fy~~ 366 (366)
+|+.++..++++ +|.||+|
T Consensus 127 ~~~~~~~~~~~~~~v~F~a~ 146 (229)
T 2ywm_A 127 TLELLQVVDIPIEIWVFVTT 146 (229)
T ss_dssp HHHHHTTCCSCEEEEEEECT
T ss_pred HHHHHHhcCCCeEEEEEECC
Confidence 999998777777 7789986
No 95
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=99.66 E-value=1.6e-16 Score=128.03 Aligned_cols=102 Identities=22% Similarity=0.445 Sum_probs=88.9
Q ss_pred CceEEe-cchhhhhhhcc----CCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeee
Q psy1110 99 SEVVHL-TDDNFDLVIQE----ESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLR 173 (366)
Q Consensus 99 ~~v~~l-~~~~~~~~i~~----~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~ 173 (366)
+.+..+ +.++|++.+.. +++++|.||++||++|+.+.|.++++++.+. +
T Consensus 4 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~------------------------- 57 (113)
T 1ti3_A 4 GQVIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKFP-N------------------------- 57 (113)
T ss_dssp CCEEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHCS-S-------------------------
T ss_pred CceeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhCC-C-------------------------
Confidence 457777 56899988854 8999999999999999999999999988774 3
Q ss_pred cCCCcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccc
Q psy1110 174 NKNGEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRI 253 (366)
Q Consensus 174 ~~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~ 253 (366)
T Consensus 58 -------------------------------------------------------------------------------- 57 (113)
T 1ti3_A 58 -------------------------------------------------------------------------------- 57 (113)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCC
Q psy1110 254 KSINSGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDP 321 (366)
Q Consensus 254 ~p~~~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~ 321 (366)
+.++.+|++.+..++++|+|+++||+++|++|+.+.++.| .+.+.|.++|++.
T Consensus 58 --------------v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~g-~~~~~l~~~l~~~ 110 (113)
T 1ti3_A 58 --------------VTFLKVDVDELKAVAEEWNVEAMPTFIFLKDGKLVDKTVG-ADKDGLPTLVAKH 110 (113)
T ss_dssp --------------EEEEEEETTTCHHHHHHHHCSSTTEEEEEETTEEEEEEEC-CCTTHHHHHHHHH
T ss_pred --------------cEEEEEEccccHHHHHhCCCCcccEEEEEeCCEEEEEEec-CCHHHHHHHHHHh
Confidence 6778888888889999999999999999999999988989 5888899988754
No 96
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=99.65 E-value=1.3e-16 Score=131.42 Aligned_cols=105 Identities=20% Similarity=0.332 Sum_probs=88.5
Q ss_pred ceEEe--cchhhhh-hhccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCC
Q psy1110 100 EVVHL--TDDNFDL-VIQEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKN 176 (366)
Q Consensus 100 ~v~~l--~~~~~~~-~i~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~ 176 (366)
.+..+ +..+|++ +.+++++++|.||++||++|+.+.|.|+++++.+ ..
T Consensus 4 ~v~~~~g~~~~~~~~~~~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~-~~---------------------------- 54 (118)
T 2f51_A 4 PIVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEAN-KD---------------------------- 54 (118)
T ss_dssp CSEEECSCHHHHHHHHHHCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC-TT----------------------------
T ss_pred cceEecCCHHHHHHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC-CC----------------------------
Confidence 56777 5688985 5567899999999999999999999999999887 44
Q ss_pred CcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeecccccccccc
Q psy1110 177 GEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSI 256 (366)
Q Consensus 177 G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~ 256 (366)
T Consensus 55 -------------------------------------------------------------------------------- 54 (118)
T 2f51_A 55 -------------------------------------------------------------------------------- 54 (118)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCccceeEEEEecccccccccccccccCCeEEEecC----CceeeecCCCCCHHHHHHHHhCCCCCC
Q psy1110 257 NSGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRA----GSVAFDAGHLRDASRLVEFMRDPTEPP 325 (366)
Q Consensus 257 ~~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~----G~~~~~~~g~~~~e~l~~fi~~~~~~~ 325 (366)
+.++.+|++.+..++++|+|+++||+++|++ |+.+.++.|..+ ++|.+.+.++..++
T Consensus 55 -----------v~~~~vd~~~~~~~~~~~~i~~~Pt~~~~~~~~~~G~~~~~~~G~~~-~~l~~~~~~~~~~~ 115 (118)
T 2f51_A 55 -----------VTFIKVDVDKNGNAADAYGVSSIPALFFVKKEGNEIKTLDQFVGADV-SRIKADIEKFKHHH 115 (118)
T ss_dssp -----------SEEEEEETTTCHHHHHHTTCCSSSEEEEEEEETTEEEEEEEEESCCH-HHHHHHHHHHC---
T ss_pred -----------eEEEEEECCCCHHHHHhcCCCCCCEEEEEeCCCCcceEEEeecCCCH-HHHHHHHHHhhhcc
Confidence 6788888888889999999999999999998 999999999765 55888888777544
No 97
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=99.65 E-value=6e-16 Score=159.00 Aligned_cols=147 Identities=24% Similarity=0.398 Sum_probs=110.9
Q ss_pred CCCCceEEecchhhhhhh-ccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeec
Q psy1110 96 DTESEVVHLTDDNFDLVI-QEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRN 174 (366)
Q Consensus 96 ~~~~~v~~l~~~~~~~~i-~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~ 174 (366)
+..+.|..|++++|+..+ +++++++|+|||+||++|+.+.|.|+++++.+.+.
T Consensus 9 ~~~~~V~~Lt~~~f~~~v~~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~~-------------------------- 62 (519)
T 3t58_A 9 SSSDPLTLLDADSVRPTVLGSSSAWAVEFFASWCGHAIAFAPTWKELANDVKDW-------------------------- 62 (519)
T ss_dssp CTTSSSEEECTTTHHHHHSSCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGGG--------------------------
T ss_pred CCCCCcEECChHHHHHHHHhCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhCc--------------------------
Confidence 345679999999999866 66799999999999999999999999999999773
Q ss_pred CCCcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeecccccccc
Q psy1110 175 KNGEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIK 254 (366)
Q Consensus 175 ~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~ 254 (366)
T Consensus 63 -------------------------------------------------------------------------------- 62 (519)
T 3t58_A 63 -------------------------------------------------------------------------------- 62 (519)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCCCCCCccceeEEEEecc--cccccccccccccCCeEEEec----CCceeeecCCCCCHHHHHHHHhCCCCCCC-C
Q psy1110 255 SINSGSFSPRQITGILAAVDVT--REKSLGKRFDIKGFPTLKYFR----AGSVAFDAGHLRDASRLVEFMRDPTEPPP-P 327 (366)
Q Consensus 255 p~~~~~~~~~~~~v~~a~vd~~--~~~~l~~~~~I~~~Ptl~~fk----~G~~~~~~~g~~~~e~l~~fi~~~~~~~~-~ 327 (366)
...+.++++|++ .+..++++|+|+++||+++|+ +|+.+..+.|.++.+.|.++|.+.+.... .
T Consensus 63 ----------~~~v~~~~VD~d~d~~~~l~~~~~V~~~PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~~~~~~ 132 (519)
T 3t58_A 63 ----------RPALNLAVLDCAEETNSAVCREFNIAGFPTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALESHRDT 132 (519)
T ss_dssp ----------TTTEEEEEEETTSGGGHHHHHHTTCCSBSEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHTTCCSC
T ss_pred ----------CCcEEEEEEECCccccHHHHHHcCCcccCEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHhhcccc
Confidence 122788899985 478999999999999999998 45556777788999999988876654332 1
Q ss_pred CCCCCCCCCCCCeeEEechhcHHHHhhccC--ceEEEEe
Q psy1110 328 PPPEPAWAEEPSEVYHLGADNFASTLRKKK--HALVMFY 364 (366)
Q Consensus 328 ~~~~~~~~~~~~~v~~lt~~~~~~~~~~~~--~~~v~fy 364 (366)
+|+. ...+..++..++..++.... +.+++|+
T Consensus 133 ~P~~------~p~l~~it~~~l~~~l~~~~~~~vallF~ 165 (519)
T 3t58_A 133 WPPA------CPPLEPAKLNDIDGFFTRNKADYLALVFE 165 (519)
T ss_dssp CCTT------CCCCSBCCHHHHTTGGGSCCCSEEEEEEE
T ss_pred CCCC------CCccCcCCHHHHHHHhccCCCCeEEEEec
Confidence 1110 00144466777777775433 4556654
No 98
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.65 E-value=6.1e-16 Score=130.64 Aligned_cols=102 Identities=10% Similarity=0.122 Sum_probs=85.3
Q ss_pred CCceEEecchhhhhhhcc---CCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeec
Q psy1110 98 ESEVVHLTDDNFDLVIQE---ESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRN 174 (366)
Q Consensus 98 ~~~v~~l~~~~~~~~i~~---~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~ 174 (366)
.+.+..|+.++|++.+.. +++++|+|||+||++|+.+.|.|+++++++. .
T Consensus 9 ~g~v~~i~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~~-~-------------------------- 61 (135)
T 2dbc_A 9 FGELREISGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKFP-E-------------------------- 61 (135)
T ss_dssp CCSCEECCHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHCS-S--------------------------
T ss_pred CCceEEcCHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHCC-C--------------------------
Confidence 356888999999987743 3689999999999999999999999998873 3
Q ss_pred CCCcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeecccccccc
Q psy1110 175 KNGEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIK 254 (366)
Q Consensus 175 ~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~ 254 (366)
T Consensus 62 -------------------------------------------------------------------------------- 61 (135)
T 2dbc_A 62 -------------------------------------------------------------------------------- 61 (135)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCC-------CHHHHHHHHhCCC
Q psy1110 255 SINSGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLR-------DASRLVEFMRDPT 322 (366)
Q Consensus 255 p~~~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~-------~~e~l~~fi~~~~ 322 (366)
+.++++|++... .+|+|+++||+++|++|+.+.++.|.. +.+.|..+|.++.
T Consensus 62 -------------v~~~~vd~~~~~---~~~~i~~~Pt~~~~~~G~~v~~~~G~~~~~~~~~~~~~l~~~l~~~~ 120 (135)
T 2dbc_A 62 -------------TKFVKAIVNSCI---EHYHDNCLPTIFVYKNGQIEGKFIGIIECGGINLKLEELEWKLSEVG 120 (135)
T ss_dssp -------------EEEEEECCSSSC---SSCCSSCCSEEEEESSSSCSEEEESTTTTTCTTCCHHHHHHHHHHHT
T ss_pred -------------cEEEEEEhhcCc---ccCCCCCCCEEEEEECCEEEEEEEeEEeeCCCcCCHHHHHHHHHHcC
Confidence 556777776553 689999999999999999998888875 6788999998653
No 99
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=99.45 E-value=1.3e-17 Score=131.97 Aligned_cols=102 Identities=29% Similarity=0.556 Sum_probs=89.8
Q ss_pred eEEecchhhhhhh-ccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCCCcc
Q psy1110 101 VVHLTDDNFDLVI-QEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKNGEP 179 (366)
Q Consensus 101 v~~l~~~~~~~~i-~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~G~~ 179 (366)
+..|++++|++.+ +++++++|.||++||++|+.+.|.++++++.+.++
T Consensus 3 v~~l~~~~~~~~~~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~~~------------------------------- 51 (106)
T 2yj7_A 3 VIEVTDENFEQEVLKSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYEGK------------------------------- 51 (106)
Confidence 6688899998644 67899999999999999999999999999887655
Q ss_pred cccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccCCC
Q psy1110 180 TTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSINSG 259 (366)
Q Consensus 180 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~~~ 259 (366)
T Consensus 52 -------------------------------------------------------------------------------- 51 (106)
T 2yj7_A 52 -------------------------------------------------------------------------------- 51 (106)
Confidence
Q ss_pred CCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCC
Q psy1110 260 SFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDP 321 (366)
Q Consensus 260 ~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~ 321 (366)
+.++.+|++.+..++++|+|+++||+++|++|+.+.++.|..+.+.|.+||++.
T Consensus 52 --------~~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 2yj7_A 52 --------VKVVKVNVDENPNTAAQYGIRSIPTLLLFKNGQVVDRLVGAQPKEALKERIDKH 105 (106)
Confidence 566777888888899999999999999999999999999999999999998764
No 100
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=99.64 E-value=4.6e-16 Score=145.54 Aligned_cols=104 Identities=19% Similarity=0.339 Sum_probs=93.6
Q ss_pred CCceEEecchhhhhhhccCCeEEEEEE--CCCChhhhcccHHHHHHHHHHhc-cccEEEeeccCCcccccccceeeeeec
Q psy1110 98 ESEVVHLTDDNFDLVIQEESSVLVMFY--APWCGHCKKLKPEYEEAAATMKQ-QRAYYGMGMLRHRPQASNVAVVSSLRN 174 (366)
Q Consensus 98 ~~~v~~l~~~~~~~~i~~~k~vlV~F~--a~wC~~Ck~~~p~~e~la~~~~~-~v~~~~v~~~~~~~~~~~~~v~~~l~~ 174 (366)
++.+..|++.||++++.++++|+|+|| ||||+ +.|.|+++|+.+.+ .
T Consensus 15 ~~~v~~Lt~~nF~~vi~~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~~~-------------------------- 64 (248)
T 2c0g_A 15 CTGCVDLDELSFEKTVERFPYSVVKFDIASPYGE----KHEAFTAFSKSAHKAT-------------------------- 64 (248)
T ss_dssp CTTCEECCTTTHHHHHTTSSEEEEEEEESSCCSH----HHHHHHHHHHHHHHHC--------------------------
T ss_pred CCCcEECCHHHHHHHHhcCCCEEEEEECCCCCCc----cHHHHHHHHHHHhccC--------------------------
Confidence 457899999999999888999999999 99999 99999999999965 2
Q ss_pred CCCcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeecccccccc
Q psy1110 175 KNGEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIK 254 (366)
Q Consensus 175 ~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~ 254 (366)
T Consensus 65 -------------------------------------------------------------------------------- 64 (248)
T 2c0g_A 65 -------------------------------------------------------------------------------- 64 (248)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCCCCCCccceeEEEEeccc-----ccccccccccc--cCCeEEEecCCce--eeec--CCCCCHHHHHHHHhCCCC
Q psy1110 255 SINSGSFSPRQITGILAAVDVTR-----EKSLGKRFDIK--GFPTLKYFRAGSV--AFDA--GHLRDASRLVEFMRDPTE 323 (366)
Q Consensus 255 p~~~~~~~~~~~~v~~a~vd~~~-----~~~l~~~~~I~--~~Ptl~~fk~G~~--~~~~--~g~~~~e~l~~fi~~~~~ 323 (366)
.++.|+++||+. +.++|.+|+|+ +||||++|+ |+. ..+| .|.++.+.|.+||+++++
T Consensus 65 -----------~~v~~akVD~d~~g~~~n~~la~~~~V~~~~~PTl~~F~-G~~~~~~~y~~~G~~~~~~L~~fi~~~~~ 132 (248)
T 2c0g_A 65 -----------KDLLIATVGVKDYGELENKALGDRYKVDDKNFPSIFLFK-GNADEYVQLPSHVDVTLDNLKAFVSANTP 132 (248)
T ss_dssp -----------SSEEEEEEEECSSTTCTTHHHHHHTTCCTTSCCEEEEES-SSSSSEEECCTTSCCCHHHHHHHHHHHSS
T ss_pred -----------CCeEEEEEECCcccccccHHHHHHhCCCcCCCCeEEEEe-CCcCcceeecccCCCCHHHHHHHHHHhhc
Confidence 238899999998 88999999999 999999999 983 5678 899999999999998876
No 101
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=99.63 E-value=1.8e-16 Score=133.48 Aligned_cols=104 Identities=19% Similarity=0.395 Sum_probs=88.9
Q ss_pred CCceEEecc-hhhhhhhcc--CCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeec
Q psy1110 98 ESEVVHLTD-DNFDLVIQE--ESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRN 174 (366)
Q Consensus 98 ~~~v~~l~~-~~~~~~i~~--~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~ 174 (366)
.+.+..+++ ++|+.+++. +++++|+|||+||++|+.+.|.|+++++.+ .
T Consensus 19 ~~~v~~l~~~~~~~~~l~~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~--~-------------------------- 70 (133)
T 3cxg_A 19 QSIYIELKNTGSLNQVFSSTQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY--Y-------------------------- 70 (133)
T ss_dssp TEEEEECCCTTHHHHHHTC-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE--E--------------------------
T ss_pred CccEEEecChhHHHHHHHhcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc--C--------------------------
Confidence 456788886 889888865 579999999999999999999998876544 2
Q ss_pred CCCcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeecccccccc
Q psy1110 175 KNGEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIK 254 (366)
Q Consensus 175 ~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~ 254 (366)
T Consensus 71 -------------------------------------------------------------------------------- 70 (133)
T 3cxg_A 71 -------------------------------------------------------------------------------- 70 (133)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCCCCCCccceeEEEEecccccccccccccccCCeEEEec--CCc--eeeecCCCCCHHHHHHHHhCCCC
Q psy1110 255 SINSGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFR--AGS--VAFDAGHLRDASRLVEFMRDPTE 323 (366)
Q Consensus 255 p~~~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk--~G~--~~~~~~g~~~~e~l~~fi~~~~~ 323 (366)
+.++.+|++.+..++.+|+|+++||+++|+ +|+ .+.++.|. +.++|.++|++.+.
T Consensus 71 -------------v~~~~vd~~~~~~l~~~~~v~~~Pt~~~~~~~~g~g~~~~~~~G~-~~~~l~~~l~~~l~ 129 (133)
T 3cxg_A 71 -------------VTLVDIDVDIHPKLNDQHNIKALPTFEFYFNLNNEWVLVHTVEGA-NQNDIEKAFQKYCL 129 (133)
T ss_dssp -------------CEEEEEETTTCHHHHHHTTCCSSSEEEEEEEETTEEEEEEEEESC-CHHHHHHHHHHHSE
T ss_pred -------------EEEEEEeccchHHHHHhcCCCCCCEEEEEEecCCCeEEEEEEcCC-CHHHHHHHHHHHHH
Confidence 667888898889999999999999999997 898 78888898 88999999987653
No 102
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=99.62 E-value=2.4e-16 Score=130.60 Aligned_cols=106 Identities=21% Similarity=0.424 Sum_probs=89.1
Q ss_pred eEEecchhhhhhh----ccCCeEEEEEECCCChhhhcccHHH---HHHHHHHhccccEEEeeccCCcccccccceeeeee
Q psy1110 101 VVHLTDDNFDLVI----QEESSVLVMFYAPWCGHCKKLKPEY---EEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLR 173 (366)
Q Consensus 101 v~~l~~~~~~~~i----~~~k~vlV~F~a~wC~~Ck~~~p~~---e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~ 173 (366)
...++..+|++.+ .++++++|+||++||++|+.+.|.+ +++++.+...
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~~------------------------- 62 (130)
T 2kuc_A 8 GIAFRELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFNRH------------------------- 62 (130)
T ss_dssp CCCCBCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHHHH-------------------------
T ss_pred CCCcccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHhcC-------------------------
Confidence 3456788888766 3589999999999999999999999 7777666555
Q ss_pred cCCCcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccc
Q psy1110 174 NKNGEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRI 253 (366)
Q Consensus 174 ~~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~ 253 (366)
T Consensus 63 -------------------------------------------------------------------------------- 62 (130)
T 2kuc_A 63 -------------------------------------------------------------------------------- 62 (130)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCCCCCCCccceeEEEEecc--cccccccccccccCCeEEEe-cCCceeeecCCCCCHHHHHHHHhCCCCCC
Q psy1110 254 KSINSGSFSPRQITGILAAVDVT--REKSLGKRFDIKGFPTLKYF-RAGSVAFDAGHLRDASRLVEFMRDPTEPP 325 (366)
Q Consensus 254 ~p~~~~~~~~~~~~v~~a~vd~~--~~~~l~~~~~I~~~Ptl~~f-k~G~~~~~~~g~~~~e~l~~fi~~~~~~~ 325 (366)
+.++.+|++ .+..++++|+|+++||+++| ++|+++.++.|.++.+.|.+||++...+.
T Consensus 63 --------------~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~G~~~~~~~G~~~~~~l~~~l~~~~~~~ 123 (130)
T 2kuc_A 63 --------------FVNLKMDMEKGEGVELRKKYGVHAYPTLLFINSSGEVVYRLVGAEDAPELLKKVKLGVESE 123 (130)
T ss_dssp --------------SEEEEECSSSTTHHHHHHHTTCCSSCEEEEECTTSCEEEEEESCCCHHHHHHHHHHHHSCC
T ss_pred --------------eEEEEEecCCcchHHHHHHcCCCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHHhc
Confidence 556677776 46788999999999999999 79999999999999999999999887655
No 103
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=99.62 E-value=3.2e-16 Score=143.66 Aligned_cols=105 Identities=19% Similarity=0.294 Sum_probs=90.9
Q ss_pred CCCceEEe-cchhhhhhhcc---CCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeee
Q psy1110 97 TESEVVHL-TDDNFDLVIQE---ESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSL 172 (366)
Q Consensus 97 ~~~~v~~l-~~~~~~~~i~~---~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l 172 (366)
..+.+..+ +.++|..++.. +++|+|.||++||++|+.+.|.|+++++.|. .
T Consensus 97 ~~g~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~-~------------------------ 151 (217)
T 2trc_P 97 RYGFVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYP-M------------------------ 151 (217)
T ss_dssp CCCSEEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT-T------------------------
T ss_pred CCCeEEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCC-C------------------------
Confidence 34568888 88999998844 3899999999999999999999999998773 3
Q ss_pred ecCCCcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeecccccc
Q psy1110 173 RNKNGEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKR 252 (366)
Q Consensus 173 ~~~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~ 252 (366)
T Consensus 152 -------------------------------------------------------------------------------- 151 (217)
T 2trc_P 152 -------------------------------------------------------------------------------- 151 (217)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCCCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCH-------HHHHHHHhCCC
Q psy1110 253 IKSINSGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDA-------SRLVEFMRDPT 322 (366)
Q Consensus 253 ~~p~~~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~-------e~l~~fi~~~~ 322 (366)
+.|+++|++ +..++.+|+|+++||+++|++|+.+.++.|.++. +.|..||.++.
T Consensus 152 ---------------v~f~~vd~~-~~~l~~~~~i~~~PTl~~~~~G~~v~~~~G~~~~~g~~~~~~~Le~~L~~~g 212 (217)
T 2trc_P 152 ---------------VKFCKIRAS-NTGAGDRFSSDVLPTLLVYKGGELISNFISVAEQFAEDFFAADVESFLNEYG 212 (217)
T ss_dssp ---------------SEEEEEEHH-HHTCSTTSCGGGCSEEEEEETTEEEEEETTGGGGSCSSCCHHHHHHHHHTTT
T ss_pred ---------------eEEEEEECC-cHHHHHHCCCCCCCEEEEEECCEEEEEEeCCcccCcccCCHHHHHHHHHHcC
Confidence 678888888 7789999999999999999999999999998775 88999998764
No 104
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=99.62 E-value=1.1e-16 Score=132.21 Aligned_cols=107 Identities=22% Similarity=0.469 Sum_probs=91.1
Q ss_pred CCceEEec-chhhhhhhcc----CCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeee
Q psy1110 98 ESEVVHLT-DDNFDLVIQE----ESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSL 172 (366)
Q Consensus 98 ~~~v~~l~-~~~~~~~i~~----~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l 172 (366)
.+.+..++ .++|+..+.. +++++|.||++||++|+.+.|.|+++++.+. +
T Consensus 13 ~~~~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~-~------------------------ 67 (130)
T 1wmj_A 13 EGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP-G------------------------ 67 (130)
T ss_dssp CSSSBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT-T------------------------
T ss_pred CcceEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC-C------------------------
Confidence 44677774 5889987753 8999999999999999999999999998875 3
Q ss_pred ecCCCcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeecccccc
Q psy1110 173 RNKNGEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKR 252 (366)
Q Consensus 173 ~~~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~ 252 (366)
T Consensus 68 -------------------------------------------------------------------------------- 67 (130)
T 1wmj_A 68 -------------------------------------------------------------------------------- 67 (130)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCCCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCCCCC
Q psy1110 253 IKSINSGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPTEPP 325 (366)
Q Consensus 253 ~~p~~~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~~~~ 325 (366)
+.++.+|++.+..++++|+|+++||+++|++|+.+.++.| .+.+.|.++|++.....
T Consensus 68 ---------------v~~~~v~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g-~~~~~l~~~l~~~~~~~ 124 (130)
T 1wmj_A 68 ---------------AVFLKVDVDELKEVAEKYNVEAMPTFLFIKDGAEADKVVG-ARKDDLQNTIVKHVGAT 124 (130)
T ss_dssp ---------------BCCEECCTTTSGGGHHHHTCCSSCCCCBCTTTTCCBCCCT-TCTTTHHHHHHHHTSSS
T ss_pred ---------------CEEEEEeccchHHHHHHcCCCccceEEEEeCCeEEEEEeC-CCHHHHHHHHHHHHhcc
Confidence 4567778888888999999999999999999998888999 58889999998877644
No 105
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=99.61 E-value=1.6e-15 Score=141.26 Aligned_cols=103 Identities=17% Similarity=0.284 Sum_probs=92.4
Q ss_pred CceEEecchhhhhhhccCCeEEEEEEC--CCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCC
Q psy1110 99 SEVVHLTDDNFDLVIQEESSVLVMFYA--PWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKN 176 (366)
Q Consensus 99 ~~v~~l~~~~~~~~i~~~k~vlV~F~a--~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~ 176 (366)
+.+..|++.+|+.++.++++++|+||| |||+ +.|.|+++++.+.+.
T Consensus 5 ~~v~~Lt~~nF~~~i~~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~~~---------------------------- 52 (240)
T 2qc7_A 5 KGALPLDTVTFYKVIPKSKFVLVKFDTQYPYGE----KQDEFKRLAENSASS---------------------------- 52 (240)
T ss_dssp TTCEECCTTHHHHHGGGCSEEEEEECCSSCCSH----HHHHHHHHHHHHTTC----------------------------
T ss_pred CCceECCHHHHHHHHcCCCCEEEEEeCCCCCCc----chHHHHHHHHHhcCC----------------------------
Confidence 368899999999999889999999999 9999 999999999998643
Q ss_pred CcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeecccccccccc
Q psy1110 177 GEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSI 256 (366)
Q Consensus 177 G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~ 256 (366)
T Consensus 53 -------------------------------------------------------------------------------- 52 (240)
T 2qc7_A 53 -------------------------------------------------------------------------------- 52 (240)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCccceeEEEEe-----cccccccccccccc--cCCeEEEecCCc--eeeecCCCCCHHHHHHHHhCCC
Q psy1110 257 NSGSFSPRQITGILAAVD-----VTREKSLGKRFDIK--GFPTLKYFRAGS--VAFDAGHLRDASRLVEFMRDPT 322 (366)
Q Consensus 257 ~~~~~~~~~~~v~~a~vd-----~~~~~~l~~~~~I~--~~Ptl~~fk~G~--~~~~~~g~~~~e~l~~fi~~~~ 322 (366)
.++.|+++| |+.+..+|.+|+|+ +||||++|++|+ ...+|.|.++.+.|.+||++..
T Consensus 53 ---------~~v~~akVDvd~~g~~~~~~l~~~~~V~~~~~PTl~~f~~G~~~~~~~y~G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 53 ---------DDLLVAEVGISDYGDKLNMELSEKYKLDKESYPVFYLFRDGDFENPVPYTGAVKVGAIQRWLKGQG 118 (240)
T ss_dssp ---------TTEEEEEECCCCSSSCCSHHHHHHTTCCGGGCSEEEEEETTCSSCCEECCSCSCHHHHHHHHHHTT
T ss_pred ---------CCeEEEEEeCCcccchhhHHHHHHcCCCCCCCCEEEEEeCCCcCcceeecCCCCHHHHHHHHHHhc
Confidence 237889999 55688999999999 999999999998 4678999999999999999886
No 106
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=99.60 E-value=5.8e-16 Score=140.46 Aligned_cols=86 Identities=19% Similarity=0.228 Sum_probs=70.8
Q ss_pred eeEEEEeccc--ccccccccccccCCeEEEecCCcee-eecCCCCCHHHHHHHHhCCCCCCCCCCCCCCCCCCCCeeEEe
Q psy1110 268 GILAAVDVTR--EKSLGKRFDIKGFPTLKYFRAGSVA-FDAGHLRDASRLVEFMRDPTEPPPPPPPEPAWAEEPSEVYHL 344 (366)
Q Consensus 268 v~~a~vd~~~--~~~l~~~~~I~~~Ptl~~fk~G~~~-~~~~g~~~~e~l~~fi~~~~~~~~~~~~~~~~~~~~~~v~~l 344 (366)
+.++++|++. +..++.+|+|+++||+++|++|+.. .+|.|.++.+.+.+|+........ ....|
T Consensus 55 v~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~~G~~~~~~l~~~l~~~l~~~~-------------~~~~l 121 (226)
T 1a8l_A 55 LSYEIVDFDTPEGKELAKRYRIDRAPATTITQDGKDFGVRYFGLPAGHEFAAFLEDIVDVSR-------------EETNL 121 (226)
T ss_dssp EEEEEEETTSHHHHHHHHHTTCCSSSEEEEEETTBCCSEEEESCCCTTHHHHHHHHHHHHHH-------------TCCCC
T ss_pred eEEEEEeCCCcccHHHHHHcCCCcCceEEEEcCCceeeEEEeccCcHHHHHHHHHHHHhhcC-------------CCCCC
Confidence 7889999998 8899999999999999999999764 788899998999998876542110 13467
Q ss_pred chhcHHHHhhccCce-EEEEecC
Q psy1110 345 GADNFASTLRKKKHA-LVMFYAP 366 (366)
Q Consensus 345 t~~~~~~~~~~~~~~-~v~fy~~ 366 (366)
+.+++..+...++++ +|.||||
T Consensus 122 ~~~~~~~~~~~~~~~~~v~F~a~ 144 (226)
T 1a8l_A 122 MDETKQAIRNIDQDVRILVFVTP 144 (226)
T ss_dssp CHHHHHHHTTCCSCEEEEEEECS
T ss_pred CHHHHHHHHhcCCCcEEEEEeCC
Confidence 889999988777777 9999986
No 107
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=99.60 E-value=1.7e-15 Score=126.36 Aligned_cols=54 Identities=17% Similarity=0.302 Sum_probs=45.4
Q ss_pred eeEEEEec---cccccccccccc---ccCCeEEEe-cCCceeeecCC-------CCCHHHHHHHHhCC
Q psy1110 268 GILAAVDV---TREKSLGKRFDI---KGFPTLKYF-RAGSVAFDAGH-------LRDASRLVEFMRDP 321 (366)
Q Consensus 268 v~~a~vd~---~~~~~l~~~~~I---~~~Ptl~~f-k~G~~~~~~~g-------~~~~e~l~~fi~~~ 321 (366)
+.++.+|+ +.+..++++|+| +++||+++| ++|+++.++.| ..+.+.+.+|+++.
T Consensus 64 ~~~~~vd~~~~~~~~~l~~~~~v~~~~~~Pt~~~~d~~G~~~~~~~g~~~~~~~~~~~~~l~~~l~~l 131 (133)
T 3fk8_A 64 FEVVKIDVGNFDRNLELSQAYGDPIQDGIPAVVVVNSDGKVRYTTKGGELANARKMSDQGIYDFFAKI 131 (133)
T ss_dssp CEEEEEECTTTTSSHHHHHHTTCGGGGCSSEEEEECTTSCEEEECCSCTTTTGGGSCHHHHHHHHHHH
T ss_pred EEEEEEeCCcccchHHHHHHhCCccCCccceEEEECCCCCEEEEecCCcccccccCCHHHHHHHHHHh
Confidence 55666666 677788999999 999999999 89999999988 67888999988753
No 108
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=99.58 E-value=2.7e-15 Score=140.01 Aligned_cols=105 Identities=17% Similarity=0.236 Sum_probs=87.8
Q ss_pred CCCceEEe-cchhhhhhhc---cCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeee
Q psy1110 97 TESEVVHL-TDDNFDLVIQ---EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSL 172 (366)
Q Consensus 97 ~~~~v~~l-~~~~~~~~i~---~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l 172 (366)
..+.|..| +.++|...+. ++++|+|.|||+||++|+.+.|.|++|++.|.+
T Consensus 110 ~~G~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~------------------------- 164 (245)
T 1a0r_P 110 RYGFVYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYPM------------------------- 164 (245)
T ss_dssp CCCSEEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTT-------------------------
T ss_pred CCCeEEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC-------------------------
Confidence 34578888 7899999884 378999999999999999999999999998743
Q ss_pred ecCCCcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeecccccc
Q psy1110 173 RNKNGEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKR 252 (366)
Q Consensus 173 ~~~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~ 252 (366)
T Consensus 165 -------------------------------------------------------------------------------- 164 (245)
T 1a0r_P 165 -------------------------------------------------------------------------------- 164 (245)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCCCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCceeeecCCC-------CCHHHHHHHHhCCC
Q psy1110 253 IKSINSGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHL-------RDASRLVEFMRDPT 322 (366)
Q Consensus 253 ~~p~~~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~-------~~~e~l~~fi~~~~ 322 (366)
+.|+++|++. ..++..|+|.++||+++|++|+.+.++.|. ++.+.|..||.++.
T Consensus 165 ---------------v~f~kVd~d~-~~l~~~~~I~~~PTll~~~~G~~v~~~vG~~~~~g~~~~~e~Le~~L~~~g 225 (245)
T 1a0r_P 165 ---------------VKFCKIKASN-TGAGDRFSSDVLPTLLVYKGGELLSNFISVTEQLAEEFFTGDVESFLNEYG 225 (245)
T ss_dssp ---------------SEEEEEEHHH-HCCTTSSCTTTCSEEEEEETTEEEEEETTGGGGSCTTCCHHHHHHHHHTTT
T ss_pred ---------------CEEEEEeCCc-HHHHHHCCCCCCCEEEEEECCEEEEEEeCCcccccccccHHHHHHHHHHcC
Confidence 5677777766 568889999999999999999988777765 34567889998864
No 109
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=99.57 E-value=8.6e-16 Score=155.33 Aligned_cols=118 Identities=24% Similarity=0.393 Sum_probs=96.5
Q ss_pred cCCCCCceEEecchhhhhhhcc--CCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeee
Q psy1110 94 WADTESEVVHLTDDNFDLVIQE--ESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSS 171 (366)
Q Consensus 94 ~~~~~~~v~~l~~~~~~~~i~~--~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~ 171 (366)
+.+..+.+..|+.++|+.++.+ +++++|+|||+||++|+.+.|.|+++++.+...-
T Consensus 18 l~~~~~~V~~Lt~~~F~~~l~~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~~~~---------------------- 75 (470)
T 3qcp_A 18 LFHLDSSVVDLSGDDFSRVHRVAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLKVEH---------------------- 75 (470)
T ss_dssp SCTTCTTEEECSCSCGGGTCTTGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSCCSS----------------------
T ss_pred ccCCCCCcEECCHHHHHHHHHhCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHhhhc----------------------
Confidence 3445678999999999998865 4889999999999999999999999999886430
Q ss_pred eecCCCcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccc
Q psy1110 172 LRNKNGEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGK 251 (366)
Q Consensus 172 l~~~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~ 251 (366)
|
T Consensus 76 -----g-------------------------------------------------------------------------- 76 (470)
T 3qcp_A 76 -----G-------------------------------------------------------------------------- 76 (470)
T ss_dssp -----C--------------------------------------------------------------------------
T ss_pred -----c--------------------------------------------------------------------------
Confidence 0
Q ss_pred cccccCCCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCc--eeeecCCCCCHHHHHHHHhCCCC
Q psy1110 252 RIKSINSGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGS--VAFDAGHLRDASRLVEFMRDPTE 323 (366)
Q Consensus 252 ~~~p~~~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~--~~~~~~g~~~~e~l~~fi~~~~~ 323 (366)
.+...++.++++|++.+..++.+|+|+++||+++|++|. ...+|.|.++.+.| .|+.+++.
T Consensus 77 ----------~~~~~~v~f~~VD~d~~~~la~~y~V~~~PTlilf~~gg~~~~~~y~G~r~~e~L-~fI~k~l~ 139 (470)
T 3qcp_A 77 ----------KDALQIATAAAVNCASEVDLCRKYDINFVPRLFFFYPRDSCRSNEECGTSSLEHV-AFENSHLE 139 (470)
T ss_dssp ----------SSGGGGCEEEEEETTTCHHHHHHTTCCSSCEEEEEEESSCCCTTSCCCCCCEEEE-ECSCTTCC
T ss_pred ----------cccCceEEEEEEECCCCHHHHHHcCCCccCeEEEEECCCceEEEEeeCCCCHHHH-HHHHHhcC
Confidence 000123889999999999999999999999999997554 36789999999888 88877764
No 110
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=99.56 E-value=3e-15 Score=125.66 Aligned_cols=54 Identities=24% Similarity=0.453 Sum_probs=44.0
Q ss_pred eEEEEec----ccccccccccccccCCeEEEe-cCCcee--eecCCCCCHHHHHHHHhCCC
Q psy1110 269 ILAAVDV----TREKSLGKRFDIKGFPTLKYF-RAGSVA--FDAGHLRDASRLVEFMRDPT 322 (366)
Q Consensus 269 ~~a~vd~----~~~~~l~~~~~I~~~Ptl~~f-k~G~~~--~~~~g~~~~e~l~~fi~~~~ 322 (366)
.++.+|+ +.+..++++|+|+++||+++| ++|+++ .++.|..+.+.|.+++++..
T Consensus 67 ~~~~vd~~~~~~~~~~l~~~~~v~~~Pt~~~~d~~G~~v~~~~~~G~~~~~~l~~~l~~~~ 127 (134)
T 2fwh_A 67 VLLQANVTANDAQDVALLKHLNVLGLPTILFFDGQGQEHPQARVTGFMDAETFSAHLRDRQ 127 (134)
T ss_dssp EEEEEECTTCCHHHHHHHHHTTCCSSSEEEEECTTSCBCGGGCBCSCCCHHHHHHHHHHC-
T ss_pred EEEEEeCCCCcchHHHHHHHcCCCCCCEEEEECCCCCEeeeeeeeeccCHHHHHHHHHhcC
Confidence 3444454 445678899999999999999 899987 78999999999999998654
No 111
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=99.55 E-value=4.6e-15 Score=129.35 Aligned_cols=127 Identities=17% Similarity=0.267 Sum_probs=91.1
Q ss_pred eEEecchhhhhhh----ccCCeEEEEEECCCChhhhcccHHH---HHHHHHHhccccEEEeeccCCcccccccceeeeee
Q psy1110 101 VVHLTDDNFDLVI----QEESSVLVMFYAPWCGHCKKLKPEY---EEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLR 173 (366)
Q Consensus 101 v~~l~~~~~~~~i----~~~k~vlV~F~a~wC~~Ck~~~p~~---e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~ 173 (366)
...++..+|++.+ .++++++|+|||+||++|+.+.+.+ .++.+.+.+++.++.+|+++..+++..+.+..
T Consensus 28 ~~~~~~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~--- 104 (172)
T 3f9u_A 28 EVHAKFDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIINNDYVLITLYVDNKTPLTEPVKIME--- 104 (172)
T ss_dssp CCCCCBSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEETTCCCEEEEEEEEEE---
T ss_pred ccccchhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhcCCEEEEEEecCcccccchhhhhhh---
Confidence 3445667777766 5689999999999999999985554 67777777689999999998876655442110
Q ss_pred cCCCcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccc
Q psy1110 174 NKNGEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRI 253 (366)
Q Consensus 174 ~~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~ 253 (366)
++
T Consensus 105 --~~---------------------------------------------------------------------------- 106 (172)
T 3f9u_A 105 --NG---------------------------------------------------------------------------- 106 (172)
T ss_dssp --TT----------------------------------------------------------------------------
T ss_pred --cc----------------------------------------------------------------------------
Confidence 00
Q ss_pred cccCCCCCCCCccceeEEEEeccccccc-ccccccccCCeEEEe-cCCceeeecCCCCC-HHHHHHHHhCC
Q psy1110 254 KSINSGSFSPRQITGILAAVDVTREKSL-GKRFDIKGFPTLKYF-RAGSVAFDAGHLRD-ASRLVEFMRDP 321 (366)
Q Consensus 254 ~p~~~~~~~~~~~~v~~a~vd~~~~~~l-~~~~~I~~~Ptl~~f-k~G~~~~~~~g~~~-~e~l~~fi~~~ 321 (366)
..............+ ..+|+|+++||+++| ++|+++.++.|.++ .+.+.+||++.
T Consensus 107 -------------~~~~~~~~~~~~~~~~~~~~~v~~~Pt~~lid~~G~~~~~~~G~~~~~~~l~~~l~~~ 164 (172)
T 3f9u_A 107 -------------TERTLRTVGDKWSYLQRVKFGANAQPFYVLIDNEGNPLNKSYAYDEDISKYINFLQTG 164 (172)
T ss_dssp -------------EEEEEEEHHHHHHHHHHHHHSCCCSSEEEEECTTSCBSSCCBCSCCCHHHHHHHHHHH
T ss_pred -------------hhhhhhhhhhhhhHHHHHHcCCCCcceEEEECCCCCEEeeccCCCCCHHHHHHHHHHH
Confidence 011111111222222 578999999999999 89999999999998 99999998754
No 112
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=99.55 E-value=7.9e-15 Score=121.41 Aligned_cols=50 Identities=18% Similarity=0.452 Sum_probs=43.5
Q ss_pred ceEEecchhhhhhhcc--CCeEEEEEECC-------CChhhhcccHHHHHHHHHHhccc
Q psy1110 100 EVVHLTDDNFDLVIQE--ESSVLVMFYAP-------WCGHCKKLKPEYEEAAATMKQQR 149 (366)
Q Consensus 100 ~v~~l~~~~~~~~i~~--~k~vlV~F~a~-------wC~~Ck~~~p~~e~la~~~~~~v 149 (366)
.+...+.++|+..+.. +++++|+|||+ ||++|+.+.|.++++++.+.+++
T Consensus 6 ~v~~~~~~~~~~~~~~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~~~~~ 64 (123)
T 1wou_A 6 EVSVSGFEEFHRAVEQHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHISEGC 64 (123)
T ss_dssp EEEEESHHHHHHHHHTTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGCCTTE
T ss_pred eEEeccHHHHHHHHHHhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHcCCCc
Confidence 4667788999988865 89999999999 99999999999999988776553
No 113
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=99.55 E-value=1e-14 Score=111.48 Aligned_cols=50 Identities=18% Similarity=0.230 Sum_probs=43.5
Q ss_pred eeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCC
Q psy1110 268 GILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDP 321 (366)
Q Consensus 268 v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~ 321 (366)
+.+..+|++++..++++|+|+++||+++ +|+. ++.|..+.+.|.++|++.
T Consensus 35 ~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~~--~~~G~~~~~~l~~~l~~~ 84 (85)
T 1fo5_A 35 VEVEYINVMENPQKAMEYGIMAVPTIVI--NGDV--EFIGAPTKEALVEAIKKR 84 (85)
T ss_dssp EEEEEEESSSSCCTTTSTTTCCSSEEEE--TTEE--ECCSSSSSHHHHHHHHHH
T ss_pred eEEEEEECCCCHHHHHHCCCcccCEEEE--CCEE--eeecCCCHHHHHHHHHHh
Confidence 6778888888888999999999999998 8985 888988999999998753
No 114
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=99.53 E-value=6.9e-15 Score=126.08 Aligned_cols=133 Identities=12% Similarity=0.220 Sum_probs=96.6
Q ss_pred ceEEecchhhhhhhccCCeEEEEEECCCChhhhcccHHHHHHHHHHhcc-ccEEEeeccCCcccccccceeeeeecCCCc
Q psy1110 100 EVVHLTDDNFDLVIQEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQ-RAYYGMGMLRHRPQASNVAVVSSLRNKNGE 178 (366)
Q Consensus 100 ~v~~l~~~~~~~~i~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~-v~~~~v~~~~~~~~~~~~~v~~~l~~~~G~ 178 (366)
.+..++++.+......+++++|.||++||++|+.+.|.+++++++|... +.++.|+++.........
T Consensus 22 ~l~~~~g~~~~~~~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~------------ 89 (164)
T 2h30_A 22 TMKTADNRPASVYLKKDKPTLIKFWASWCPLCLSELGQAEKWAQDAKFSSANLITVASPGFLHEKKDG------------ 89 (164)
T ss_dssp TCEETTSSBGGGGCCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCGGGTTSEEEEEECTTSTTCCCTT------------
T ss_pred ccCCCCCCEeeHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcccCCcEEEEEEcCCCccccCHH------------
Confidence 4566666666655556899999999999999999999999999988654 888888876422100000
Q ss_pred ccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccCC
Q psy1110 179 PTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSINS 258 (366)
Q Consensus 179 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~~ 258 (366)
...+.+ ..
T Consensus 90 --------------------------------------------~~~~~~-~~--------------------------- 97 (164)
T 2h30_A 90 --------------------------------------------EFQKWY-AG--------------------------- 97 (164)
T ss_dssp --------------------------------------------HHHHHH-TT---------------------------
T ss_pred --------------------------------------------HHHHHH-Hh---------------------------
Confidence 000000 00
Q ss_pred CCCCCCccceeEEEEecccccccccccccccCCeEEEe-cCCceeeecCCCCCHHHHHHHHhCCCC
Q psy1110 259 GSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYF-RAGSVAFDAGHLRDASRLVEFMRDPTE 323 (366)
Q Consensus 259 ~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~f-k~G~~~~~~~g~~~~e~l~~fi~~~~~ 323 (366)
.++.+..++.+.+..+++.|+|+++||++++ ++|+++.++.|..+.+.|.++|++...
T Consensus 98 -------~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~~~~ 156 (164)
T 2h30_A 98 -------LNYPKLPVVTDNGGTIAQNLNISVYPSWALIGKDGDVQRIVKGSINEAQALALIRNPNA 156 (164)
T ss_dssp -------SCCTTSCEEECTTCHHHHHTTCCSSSEEEEECTTSCEEEEEESCCCHHHHHHHHHCTTC
T ss_pred -------CCCCcceEEEcCchHHHHHcCCCccceEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 0011123455667789999999999999988 899999999999999999999998775
No 115
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=99.53 E-value=1.5e-14 Score=121.70 Aligned_cols=102 Identities=11% Similarity=0.148 Sum_probs=89.8
Q ss_pred ceEEecchhhhhhhccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCCCcc
Q psy1110 100 EVVHLTDDNFDLVIQEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKNGEP 179 (366)
Q Consensus 100 ~v~~l~~~~~~~~i~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~G~~ 179 (366)
-+..+|.++|+.+++++.+++|+|||+ |++|+.+.|.++++|++|.++
T Consensus 7 lv~~~t~~~f~~~~~~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~gk------------------------------- 54 (133)
T 2djk_A 7 LIGEIGPETYSDYMSAGIPLAYIFAET-AEERKELSDKLKPIAEAQRGV------------------------------- 54 (133)
T ss_dssp CSEECCHHHHHHHHHTTSCEEEEECSC-SSSHHHHHHHHHHHHHSSTTT-------------------------------
T ss_pred ceeccChHHHHHHhcCCCCEEEEEecC-hhhHHHHHHHHHHHHHHhCCe-------------------------------
Confidence 377899999999988899999999999 899999999999999998777
Q ss_pred cccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccCCC
Q psy1110 180 TTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSINSG 259 (366)
Q Consensus 180 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~~~ 259 (366)
T Consensus 55 -------------------------------------------------------------------------------- 54 (133)
T 2djk_A 55 -------------------------------------------------------------------------------- 54 (133)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCccceeEEEEeccccccccccccccc--CCeEEEecC--CceeeecC--CCCCHHHHHHHHhCCC
Q psy1110 260 SFSPRQITGILAAVDVTREKSLGKRFDIKG--FPTLKYFRA--GSVAFDAG--HLRDASRLVEFMRDPT 322 (366)
Q Consensus 260 ~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~--~Ptl~~fk~--G~~~~~~~--g~~~~e~l~~fi~~~~ 322 (366)
+.|+++|.+++..++..|+|++ +||+++|++ |+. +... |..+.+.|.+|+++..
T Consensus 55 --------~~f~~vd~d~~~~~a~~~gi~~~~iPtl~i~~~~~g~~-~~~~~~g~~~~~~l~~fi~~~l 114 (133)
T 2djk_A 55 --------INFGTIDAKAFGAHAGNLNLKTDKFPAFAIQEVAKNQK-FPFDQEKEITFEAIKAFVDDFV 114 (133)
T ss_dssp --------SEEEEECTTTTGGGTTTTTCCSSSSSEEEEECTTTCCB-CCCCSSSCCCHHHHHHHHHHHH
T ss_pred --------EEEEEEchHHhHHHHHHcCCCcccCCEEEEEecCcCcc-cCCCCccccCHHHHHHHHHHHH
Confidence 6788888888888999999999 999999987 765 5665 9999999999987543
No 116
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=99.53 E-value=9.4e-15 Score=111.67 Aligned_cols=51 Identities=14% Similarity=0.214 Sum_probs=43.9
Q ss_pred eeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCC
Q psy1110 268 GILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPT 322 (366)
Q Consensus 268 v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~ 322 (366)
+.+..+|++.+..++++|+|+++||+++ +|+. ++.|..+.+.|.++|++.+
T Consensus 34 ~~~~~vd~~~~~~~~~~~~v~~~Pt~~~--~G~~--~~~G~~~~~~l~~~l~~~l 84 (85)
T 1nho_A 34 IDVEKIDIMVDREKAIEYGLMAVPAIAI--NGVV--RFVGAPSREELFEAINDEM 84 (85)
T ss_dssp CCEEEECTTTCGGGGGGTCSSCSSEEEE--TTTE--EEECSSCCHHHHHHHHHHC
T ss_pred eEEEEEECCCCHHHHHhCCceeeCEEEE--CCEE--EEccCCCHHHHHHHHHHHh
Confidence 5677788888888999999999999998 8986 7888889999999997654
No 117
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=99.29 E-value=7.2e-16 Score=127.89 Aligned_cols=58 Identities=21% Similarity=0.323 Sum_probs=47.1
Q ss_pred eeEEEEec--ccccccccccccccCCeEEEe--cCCce--eeecCCCCCHHHHHHHHhCCCCCC
Q psy1110 268 GILAAVDV--TREKSLGKRFDIKGFPTLKYF--RAGSV--AFDAGHLRDASRLVEFMRDPTEPP 325 (366)
Q Consensus 268 v~~a~vd~--~~~~~l~~~~~I~~~Ptl~~f--k~G~~--~~~~~g~~~~e~l~~fi~~~~~~~ 325 (366)
+.++.+|+ ..+..++.+|+|+++||+++| ++|++ +.++.|.++.+.|.++|++.+...
T Consensus 55 ~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~~G~~~~~~~~~G~~~~~~l~~~l~~~~~~~ 118 (130)
T 2lst_A 55 FVVASVSVDTPEGQELARRYRVPGTPTFVFLVPKAGAWEEVGRLFGSRPRAEFLKELRQVCVKG 118 (130)
Confidence 34455555 345678899999999999999 67998 889999999999999999887644
No 118
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=99.48 E-value=6.5e-14 Score=115.19 Aligned_cols=98 Identities=19% Similarity=0.252 Sum_probs=81.0
Q ss_pred ceEEec-chhhhhhhccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCCCc
Q psy1110 100 EVVHLT-DDNFDLVIQEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKNGE 178 (366)
Q Consensus 100 ~v~~l~-~~~~~~~i~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~G~ 178 (366)
....|+ .++|+++++++++++|.|+|+|||+|+.+.|.++++++. .+
T Consensus 7 ~~~~i~s~e~f~~ii~~~~~vvi~khatwCgpc~~~~~~~e~~~~~--~~------------------------------ 54 (112)
T 3iv4_A 7 VAIKLSSIDQFEQVIEENKYVFVLKHSETCPISANAYDQFNKFLYE--RD------------------------------ 54 (112)
T ss_dssp CEEECCSHHHHHHHHHHCSEEEEEEECTTCHHHHHHHHHHHHHHHH--HT------------------------------
T ss_pred ceeecCCHHHHHHHHhcCCCEEEEEECCcCHhHHHHHHHHHHHhcc--CC------------------------------
Confidence 566664 478999998899999999999999999999999999984 44
Q ss_pred ccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccCC
Q psy1110 179 PTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSINS 258 (366)
Q Consensus 179 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~~ 258 (366)
T Consensus 55 -------------------------------------------------------------------------------- 54 (112)
T 3iv4_A 55 -------------------------------------------------------------------------------- 54 (112)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCccceeEEEEecccccc----cccccccc-cCCeEEEecCCceeee-cCCCCCHHHHHHHH
Q psy1110 259 GSFSPRQITGILAAVDVTREKS----LGKRFDIK-GFPTLKYFRAGSVAFD-AGHLRDASRLVEFM 318 (366)
Q Consensus 259 ~~~~~~~~~v~~a~vd~~~~~~----l~~~~~I~-~~Ptl~~fk~G~~~~~-~~g~~~~e~l~~fi 318 (366)
+.++++|.+++.. ++.+++|+ ..||+++|++|+.+.+ ..+..+.+.|.+.+
T Consensus 55 ---------v~~~~vdVde~r~~Sn~IA~~~~V~h~sPq~il~k~G~~v~~~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 55 ---------MDGYYLIVQQERDLSDYIAKKTNVKHESPQAFYFVNGEMVWNRDHGDINVSSLAQAE 111 (112)
T ss_dssp ---------CCEEEEEGGGGHHHHHHHHHHHTCCCCSSEEEEEETTEEEEEEEGGGCSHHHHHHHT
T ss_pred ---------ceEEEEEeecCchhhHHHHHHhCCccCCCeEEEEECCEEEEEeeccccCHHHHHHhh
Confidence 4566666666644 79999999 5999999999998877 45777888877655
No 119
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=99.48 E-value=1.4e-12 Score=124.68 Aligned_cols=118 Identities=15% Similarity=0.284 Sum_probs=93.9
Q ss_pred chHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCe-----------------eeEeecCCccHHHHHH
Q psy1110 15 SPLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAE-----------------VKYVYENGNTKDKIIE 75 (366)
Q Consensus 15 ~~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~-----------------~~~~y~g~r~~~~i~~ 75 (366)
..+|+++. +.+.++.|||+.....++|.+++|+ ||+.+|++|. ....|.|.|+.++|++
T Consensus 58 ~~la~~~~--~~~~~~~v~~d~~~~~~l~~~~~I~~~Pt~~~~~~g~~v~~~~g~~~~~~~~~~~~~~y~G~r~~~~i~~ 135 (298)
T 3ed3_A 58 RKAAKRLD--GVVQVAAVNCDLNKNKALCAKYDVNGFPTLMVFRPPKIDLSKPIDNAKKSFSAHANEVYSGARTLAPIVD 135 (298)
T ss_dssp HHHHHHTT--TTSEEEEEETTSTTTHHHHHHTTCCBSSEEEEEECCCC-------------CCCEEEECCSCCSHHHHHH
T ss_pred HHHHHHcc--CCcEEEEEEccCccCHHHHHhCCCCccceEEEEECCceeecccccccccccccccceeecCCcCHHHHHH
Confidence 35677776 5699999999865667999999999 9999999886 3679999999999999
Q ss_pred HHhCcCCcchhhhccCCCcCCCCCceEEecc-hhhhhhhcc-CCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEE
Q psy1110 76 FVRNPQATSEEVKKKEQDWADTESEVVHLTD-DNFDLVIQE-ESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYG 153 (366)
Q Consensus 76 fi~~~~~~~~~~~~~~~~~~~~~~~v~~l~~-~~~~~~i~~-~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~ 153 (366)
|+.+.... .+..+++ ++++.+++. +.+.++.| .. .....+.|+.+|..|.+.+.|+.
T Consensus 136 fl~~~~~~----------------~v~~i~~~~~l~~~l~~~~~~~vi~f-s~----~~~~~~~f~~~A~~~~~~~~F~~ 194 (298)
T 3ed3_A 136 FSLSRIRS----------------YVKKFVRIDTLGSLLRKSPKLSVVLF-SK----QDKISPVYKSIALDWLGKFDFYS 194 (298)
T ss_dssp HHHTTCCC----------------CEEECSCGGGHHHHHTSCSSEEEEEE-ES----SSSCCHHHHHHHHHTBTTEEEEE
T ss_pred HHHHhccc----------------ccEEcCCHHHHHHHHhcCCceEEEEE-cC----CCcchHHHHHHHHHhhcCcEEEE
Confidence 99987765 5777754 778888876 46666666 22 23567899999999988866665
Q ss_pred ee
Q psy1110 154 MG 155 (366)
Q Consensus 154 v~ 155 (366)
++
T Consensus 195 v~ 196 (298)
T 3ed3_A 195 IS 196 (298)
T ss_dssp EE
T ss_pred Ec
Confidence 55
No 120
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=99.46 E-value=6.2e-14 Score=120.73 Aligned_cols=100 Identities=15% Similarity=0.338 Sum_probs=78.2
Q ss_pred ccCCeEEEEEE-CCCChhhhcccHHH---HHHHHHHhccccEEEeeccCCcccccccceeeeeecCCCcccccCCCCCCC
Q psy1110 114 QEESSVLVMFY-APWCGHCKKLKPEY---EEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKNGEPTTHPSGTPQT 189 (366)
Q Consensus 114 ~~~k~vlV~F~-a~wC~~Ck~~~p~~---e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~G~~~~~~~g~~~~ 189 (366)
..+++++|+|| |+||++|+.+.|.+ .++++.+..++.++.+|+++...+..
T Consensus 45 ~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~~~~~~~v~vd~~~~~~~~~------------------------- 99 (154)
T 2ju5_A 45 QDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFAGVHLHMVEVDFPQKNHQPE------------------------- 99 (154)
T ss_dssp HHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHHHHHCEEEEEECCSSCCCCH-------------------------
T ss_pred hCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHhcCcEEEEEecCccccCCCh-------------------------
Confidence 45899999999 99999999999999 78877666667777777655331000
Q ss_pred CCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccCCCCCCCCcccee
Q psy1110 190 SDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSINSGSFSPRQITGI 269 (366)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~~~~~~~~~~~v~ 269 (366)
.
T Consensus 100 ------------------------------------------------------------------------------~- 100 (154)
T 2ju5_A 100 ------------------------------------------------------------------------------E- 100 (154)
T ss_dssp ------------------------------------------------------------------------------H-
T ss_pred ------------------------------------------------------------------------------h-
Confidence 0
Q ss_pred EEEEecccccccccccccccCCeEEEe-cCCceeeecCCCC--CHHHHHHHHhCCC
Q psy1110 270 LAAVDVTREKSLGKRFDIKGFPTLKYF-RAGSVAFDAGHLR--DASRLVEFMRDPT 322 (366)
Q Consensus 270 ~a~vd~~~~~~l~~~~~I~~~Ptl~~f-k~G~~~~~~~g~~--~~e~l~~fi~~~~ 322 (366)
....+..++++|+|+++||++++ ++|+++.++ |.. +.+.+.++|++.+
T Consensus 101 ----~~~~~~~l~~~~~v~~~Pt~~~~d~~G~~~~~~-G~~~~~~~~l~~~l~~~l 151 (154)
T 2ju5_A 101 ----QRQKNQELKAQYKVTGFPELVFIDAEGKQLARM-GFEPGGGAAYVSKVKSAL 151 (154)
T ss_dssp ----HHHHHHHHHHHTTCCSSSEEEEECTTCCEEEEE-CCCTTCHHHHHHHHHHHH
T ss_pred ----hHhhHHHHHHHcCCCCCCEEEEEcCCCCEEEEe-cCCCCCHHHHHHHHHHHH
Confidence 01234578899999999999999 899999999 988 8999999987654
No 121
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=99.46 E-value=4.6e-14 Score=123.13 Aligned_cols=49 Identities=22% Similarity=0.534 Sum_probs=39.0
Q ss_pred hhhhhhhccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEee
Q psy1110 107 DNFDLVIQEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMG 155 (366)
Q Consensus 107 ~~~~~~i~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~ 155 (366)
++++....++++++|+|||+||++|+.+.|.|+++++.+...+.|+.|+
T Consensus 37 ~~~~~~~~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~~~~~~~v~ 85 (164)
T 1sen_A 37 DGKKEAAASGLPLMVIIHKSWCGACKALKPKFAESTEISELSHNFVMVN 85 (164)
T ss_dssp HHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHHHTTSEEEE
T ss_pred HHHHHHHhcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCeEEEEE
Confidence 5666667779999999999999999999999999887765553333333
No 122
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.46 E-value=2.7e-13 Score=124.15 Aligned_cols=110 Identities=9% Similarity=0.112 Sum_probs=89.4
Q ss_pred chHHHhhcCCCCeEEEEeeecccCCcchhccCCcc-ceEEeeecC-eeeEeecC----CccHHHHHHHHhCcCCcchhhh
Q psy1110 15 SPLAKEIVKPKAITLGLIERLTEKADPVCTREKAK-KKVRRQKNA-EVKYVYEN----GNTKDKIIEFVRNPQATSEEVK 88 (366)
Q Consensus 15 ~~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~-Pti~~f~~g-~~~~~y~g----~r~~~~i~~fi~~~~~~~~~~~ 88 (366)
..+|+.+. .+.|+.+.- .++|.+++|+ |+|.+|++. +....|.| +++.++|.+|+.....+
T Consensus 47 ~~~A~~l~---~~~F~~t~~-----~~v~~~~~v~~p~i~lfk~~~~~~~~~~~~~~g~~~~~~l~~fi~~~~~p----- 113 (227)
T 4f9z_D 47 HSMVQKFP---GVSFGISTD-----SEVLTHYNITGNTICLFRLVDNEQLNLEDEDIESIDATKLSRFIEINSLH----- 113 (227)
T ss_dssp HHHTTTCT---TSEEEEECC-----HHHHHHTTCCSSEEEEEETTTTEEEEECHHHHHTCCHHHHHHHHHHHCCC-----
T ss_pred HHHHHhCC---CceEEEECC-----HHHHHHcCCCCCeEEEEEecCcccccccccccCCCCHHHHHHHHHHhCCC-----
Confidence 34555552 688887542 3799999999 999999974 34567884 89999999999987765
Q ss_pred ccCCCcCCCCCceEEecchhhhhhhccCCeEE-EEEECCCChhhhcccHHHHHHHHHHhcc
Q psy1110 89 KKEQDWADTESEVVHLTDDNFDLVIQEESSVL-VMFYAPWCGHCKKLKPEYEEAAATMKQQ 148 (366)
Q Consensus 89 ~~~~~~~~~~~~v~~l~~~~~~~~i~~~k~vl-V~F~a~wC~~Ck~~~p~~e~la~~~~~~ 148 (366)
.+.+++.+|+.++..++.+.+ +.|..+||++|.++.+.|+++|+.++++
T Consensus 114 -----------lv~e~t~~n~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~~k~~ 163 (227)
T 4f9z_D 114 -----------MVTEYNPVTVIGLFNSVIQIHLLLIMNKASPEYEENMHRYQKAAKLFQGK 163 (227)
T ss_dssp -----------SEEECCHHHHHHHHHSSCCEEEEEEECTTSTTHHHHHHHHHHHHHHTTTT
T ss_pred -----------ceeecCcccHHHHhccCCceEEEEEEcCCcchHHHHHHHHHHHHHHhhCC
Confidence 689999999999988775555 5566889999999999999999999887
No 123
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=99.45 E-value=2.3e-13 Score=112.29 Aligned_cols=109 Identities=14% Similarity=0.306 Sum_probs=84.1
Q ss_pred cCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCCCcccccCCCCCCCCCCCc
Q psy1110 115 EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKNGEPTTHPSGTPQTSDTPR 194 (366)
Q Consensus 115 ~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~G~~~~~~~g~~~~~~~~~ 194 (366)
.+++++|.||++||++|+.+.|.++++++++. .+.++.++++++.+....+.
T Consensus 23 ~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~--------------------------- 74 (136)
T 1lu4_A 23 QGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP-AVTFVGIATRADVGAMQSFV--------------------------- 74 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHH---------------------------
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHCC-CcEEEEEEcCCCHHHHHHHH---------------------------
Confidence 57899999999999999999999999999998 88999999887544332221
Q ss_pred cccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccCCCCCCCCccceeEEEEe
Q psy1110 195 TQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSINSGSFSPRQITGILAAVD 274 (366)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~~~~~~~~~~~v~~a~vd 274 (366)
..+ +.+..+.
T Consensus 75 -----------------------------------~~~--------------------------------~~~~~~~--- 84 (136)
T 1lu4_A 75 -----------------------------------SKY--------------------------------NLNFTNL--- 84 (136)
T ss_dssp -----------------------------------HHH--------------------------------TCCSEEE---
T ss_pred -----------------------------------HHc--------------------------------CCCceEE---
Confidence 000 0001111
Q ss_pred cccccccccccccccCCeEEEe-cCCceeeecC---CCCCHHHHHHHHhCCC
Q psy1110 275 VTREKSLGKRFDIKGFPTLKYF-RAGSVAFDAG---HLRDASRLVEFMRDPT 322 (366)
Q Consensus 275 ~~~~~~l~~~~~I~~~Ptl~~f-k~G~~~~~~~---g~~~~e~l~~fi~~~~ 322 (366)
.+.+..+++.|+|.++|+++++ ++|+++ ++. |..+.+.|.++|++..
T Consensus 85 ~d~~~~~~~~~~i~~~P~~~lid~~G~i~-~~~~~~g~~~~~~l~~~l~~ll 135 (136)
T 1lu4_A 85 NDADGVIWARYNVPWQPAFVFYRADGTST-FVNNPTAAMSQDELSGRVAALT 135 (136)
T ss_dssp ECTTSHHHHHTTCCSSSEEEEECTTSCEE-EECCSSSCCCHHHHHHHHHHC-
T ss_pred ECCchhHHHhcCCCCCCEEEEECCCCcEE-EEEcCCCccCHHHHHHHHHHHh
Confidence 1345678899999999999999 799988 898 9999999999998654
No 124
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=99.44 E-value=4.8e-13 Score=111.81 Aligned_cols=130 Identities=16% Similarity=0.182 Sum_probs=93.2
Q ss_pred EEecchhhhhhhccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCCCcccc
Q psy1110 102 VHLTDDNFDLVIQEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKNGEPTT 181 (366)
Q Consensus 102 ~~l~~~~~~~~i~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~G~~~~ 181 (366)
..+++..+..-...+++++|.||++||++|+.+.|.++++++++.+.+.++.++++........-
T Consensus 15 ~~~~g~~~~~~~~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~~~~~~~~~~~~--------------- 79 (148)
T 2b5x_A 15 AWLNGEVTREQLIGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQDQLNVVAVHMPRSEDDLDPG--------------- 79 (148)
T ss_dssp EEESCCCCHHHHTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTSEEEEEECCCSTTTSSHH---------------
T ss_pred ccccCcccchhhcCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhcCCcEEEEEEcCCCccccCHH---------------
Confidence 56677766654446799999999999999999999999999999887999999987533200000
Q ss_pred cCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccCCCCC
Q psy1110 182 HPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSINSGSF 261 (366)
Q Consensus 182 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~~~~~ 261 (366)
...+.. ..+
T Consensus 80 -----------------------------------------~~~~~~-~~~----------------------------- 88 (148)
T 2b5x_A 80 -----------------------------------------KIKETA-AEH----------------------------- 88 (148)
T ss_dssp -----------------------------------------HHHHHH-HHT-----------------------------
T ss_pred -----------------------------------------HHHHHH-HHc-----------------------------
Confidence 000000 000
Q ss_pred CCCccceeEEEEecccccccccccccccCCeEEEe-cCCceeeecCCCCCHHHHHHHHhCCCC
Q psy1110 262 SPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYF-RAGSVAFDAGHLRDASRLVEFMRDPTE 323 (366)
Q Consensus 262 ~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~f-k~G~~~~~~~g~~~~e~l~~fi~~~~~ 323 (366)
+.+..+. .+.+..+++.|+|+++|+++++ ++|+++.++.|..+.+.|.++|++.+.
T Consensus 89 ---~~~~~~~---~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 145 (148)
T 2b5x_A 89 ---DITQPIF---VDSDHALTDAFENEYVPAYYVFDKTGQLRHFQAGGSGMKMLEKRVNRVLA 145 (148)
T ss_dssp ---TCCSCEE---ECSSCHHHHHTCCCCSSEEEEECTTCBEEEEEESCSTTHHHHHHHHHHHT
T ss_pred ---CCCcceE---ECCchhHHHHhCCCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHh
Confidence 0001111 2345678899999999999999 899999999999999999998876543
No 125
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=99.43 E-value=2.1e-13 Score=115.85 Aligned_cols=114 Identities=11% Similarity=0.155 Sum_probs=87.4
Q ss_pred cCCeEEEEEECCCChhhhcccHHHHHHHHHHhcc-ccEEEeeccCCcccccccceeeeeecCCCcccccCCCCCCCCCCC
Q psy1110 115 EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQ-RAYYGMGMLRHRPQASNVAVVSSLRNKNGEPTTHPSGTPQTSDTP 193 (366)
Q Consensus 115 ~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~-v~~~~v~~~~~~~~~~~~~v~~~l~~~~G~~~~~~~g~~~~~~~~ 193 (366)
.+++++|.||++||++|+.+.|.+.+++++|.+. +.++.|+++..+.+...+.-
T Consensus 23 ~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~~~~~~~~~~~------------------------- 77 (151)
T 3raz_A 23 KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQ------------------------- 77 (151)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTTEEEEEEESSCHHHHHHHHHH-------------------------
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCChHHHHHHHHH-------------------------
Confidence 5799999999999999999999999999999554 99999999765443222210
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccCCCCCCCCccceeEEEE
Q psy1110 194 RTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSINSGSFSPRQITGILAAV 273 (366)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~~~~~~~~~~~v~~a~v 273 (366)
+ +.+..+...
T Consensus 78 --------------------------------------~--------------------------------~~~~~~~~~ 87 (151)
T 3raz_A 78 --------------------------------------T--------------------------------PVSYPIWRY 87 (151)
T ss_dssp --------------------------------------S--------------------------------CCSSCEEEE
T ss_pred --------------------------------------c--------------------------------CCCCceEec
Confidence 0 001222333
Q ss_pred ecccccccccccc--cccCCeEEEe-cCCceeeecCCCCCHHHHHHHHhCCCC
Q psy1110 274 DVTREKSLGKRFD--IKGFPTLKYF-RAGSVAFDAGHLRDASRLVEFMRDPTE 323 (366)
Q Consensus 274 d~~~~~~l~~~~~--I~~~Ptl~~f-k~G~~~~~~~g~~~~e~l~~fi~~~~~ 323 (366)
+......+.+.|+ +.++|+++++ ++|+++.++.|..+.+.|.++|++...
T Consensus 88 ~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l~~ 140 (151)
T 3raz_A 88 TGANSRNFMKTYGNTVGVLPFTVVEAPKCGYRQTITGEVNEKSLTDAVKLAHS 140 (151)
T ss_dssp CCSCHHHHHHTTTCCSCCSSEEEEEETTTTEEEECCSCCCHHHHHHHHHHHHT
T ss_pred CccchHHHHHHhCCccCCCCEEEEECCCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 3445667888999 9999998888 899999999999999999999876554
No 126
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=99.42 E-value=8.8e-14 Score=115.35 Aligned_cols=55 Identities=5% Similarity=-0.048 Sum_probs=47.2
Q ss_pred eeEEEEecccc--cccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCC
Q psy1110 268 GILAAVDVTRE--KSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPT 322 (366)
Q Consensus 268 v~~a~vd~~~~--~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~ 322 (366)
+.+.++|.+.+ ..++.+|+|.+.|||++|++|+.+.+..|....+.+..||++..
T Consensus 53 ~~l~~vdv~~~~~~~la~~~~V~g~PT~i~f~~G~ev~Ri~G~~~~~~f~~~L~~~l 109 (116)
T 3dml_A 53 APVQRLQMRDPLPPGLELARPVTFTPTFVLMAGDVESGRLEGYPGEDFFWPMLARLI 109 (116)
T ss_dssp SCEEEEETTSCCCTTCBCSSCCCSSSEEEEEETTEEEEEEECCCCHHHHHHHHHHHH
T ss_pred ceEEEEECCCCCchhHHHHCCCCCCCEEEEEECCEEEeeecCCCCHHHHHHHHHHHH
Confidence 45666777665 47888999999999999999999999999999999999997654
No 127
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=99.42 E-value=4.6e-13 Score=113.37 Aligned_cols=114 Identities=18% Similarity=0.279 Sum_probs=86.2
Q ss_pred cCCeEEEEEECCCChhhhcccHHHHHHHHHHhcc-ccEEEeeccCCcccccccceeeeeecCCCcccccCCCCCCCCCCC
Q psy1110 115 EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQ-RAYYGMGMLRHRPQASNVAVVSSLRNKNGEPTTHPSGTPQTSDTP 193 (366)
Q Consensus 115 ~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~-v~~~~v~~~~~~~~~~~~~v~~~l~~~~G~~~~~~~g~~~~~~~~ 193 (366)
.+++++|.||++||++|+.+.|.+.++++.+.+. +.++.|++++..+....+.
T Consensus 25 ~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~~~v~vv~v~~d~~~~~~~~~~-------------------------- 78 (151)
T 2f9s_A 25 KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKSQGVEIVAVNVGESKIAVHNFM-------------------------- 78 (151)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCHHHHHHHH--------------------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHHH--------------------------
Confidence 5799999999999999999999999999999874 8999999876543222220
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccCCCCCCCCccceeEEEE
Q psy1110 194 RTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSINSGSFSPRQITGILAAV 273 (366)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~~~~~~~~~~~v~~a~v 273 (366)
..+ +.+..+.
T Consensus 79 ------------------------------------~~~--------------------------------~~~~~~~-- 88 (151)
T 2f9s_A 79 ------------------------------------KSY--------------------------------GVNFPVV-- 88 (151)
T ss_dssp ------------------------------------HHH--------------------------------TCCSCEE--
T ss_pred ------------------------------------HHc--------------------------------CCCceEE--
Confidence 000 0001111
Q ss_pred ecccccccccccccccCCeEEEe-cCCceeeecCCCCCHHHHHHHHhCCCCCC
Q psy1110 274 DVTREKSLGKRFDIKGFPTLKYF-RAGSVAFDAGHLRDASRLVEFMRDPTEPP 325 (366)
Q Consensus 274 d~~~~~~l~~~~~I~~~Ptl~~f-k~G~~~~~~~g~~~~e~l~~fi~~~~~~~ 325 (366)
.+.+..+++.|+|+++|+++++ ++|+++..+.|..+.+.|.++|++.....
T Consensus 89 -~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~G~~~~~~l~~~l~~ll~~~ 140 (151)
T 2f9s_A 89 -LDTDRQVLDAYDVSPLPTTFLINPEGKVVKVVTGTMTESMIHDYMNLIKPGE 140 (151)
T ss_dssp -EETTSHHHHHTTCCSSCEEEEECTTSEEEEEEESCCCHHHHHHHHHHHSCC-
T ss_pred -ECCchHHHHhcCCCCCCeEEEECCCCcEEEEEeCCCCHHHHHHHHHHHHhhh
Confidence 1235678899999999998888 89999999999999999999998766543
No 128
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=99.40 E-value=3.8e-13 Score=101.11 Aligned_cols=44 Identities=9% Similarity=0.132 Sum_probs=36.3
Q ss_pred eeEEEEecccccccccccccccCCeEEEecCCceeeecCCCC-CHHHHHHHH
Q psy1110 268 GILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLR-DASRLVEFM 318 (366)
Q Consensus 268 v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~-~~e~l~~fi 318 (366)
+.+..+| +..++++|+|+++||+++ +|+.+.+ |.+ +.++|.+|+
T Consensus 32 ~~~~~v~---~~~~~~~~~v~~~Pt~~~--~G~~~~~--G~~~~~~~l~~~l 76 (77)
T 1ilo_A 32 AEFEKIK---EMDQILEAGLTALPGLAV--DGELKIM--GRVASKEEIKKIL 76 (77)
T ss_dssp EEEEEEC---SHHHHHHHTCSSSSCEEE--TTEEEEC--SSCCCHHHHHHHC
T ss_pred eEEEEec---CHHHHHHCCCCcCCEEEE--CCEEEEc--CCCCCHHHHHHHh
Confidence 5566676 667889999999999998 8986655 887 899998886
No 129
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=99.40 E-value=5.9e-13 Score=109.47 Aligned_cols=109 Identities=19% Similarity=0.348 Sum_probs=84.0
Q ss_pred cCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCCCcccccCCCCCCCCCCCc
Q psy1110 115 EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKNGEPTTHPSGTPQTSDTPR 194 (366)
Q Consensus 115 ~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~G~~~~~~~g~~~~~~~~~ 194 (366)
.+++++|.||++||++|+.+.|.++++++++. ++.++.++++++.+....+.
T Consensus 24 ~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~-~~~~~~v~~~~~~~~~~~~~--------------------------- 75 (136)
T 1zzo_A 24 LGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP-EVTFVGVAGLDQVPAMQEFV--------------------------- 75 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT-TSEEEEEECSSCHHHHHHHH---------------------------
T ss_pred CCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC-CeEEEEEeCCCCHHHHHHHH---------------------------
Confidence 57899999999999999999999999999998 88999999876544322221
Q ss_pred cccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccCCCCCCCCcc-ceeEEEE
Q psy1110 195 TQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSINSGSFSPRQI-TGILAAV 273 (366)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~~~~~~~~~~-~v~~a~v 273 (366)
..+ +. +..+.
T Consensus 76 -----------------------------------~~~--------------------------------~~~~~~~~-- 86 (136)
T 1zzo_A 76 -----------------------------------NKY--------------------------------PVKTFTQL-- 86 (136)
T ss_dssp -----------------------------------HHT--------------------------------TCTTSEEE--
T ss_pred -----------------------------------HHc--------------------------------CCCceEEE--
Confidence 000 00 01111
Q ss_pred ecccccccccccccccCCeEEEe-cCCceeeecCCCCCHHHHHHHHhCCC
Q psy1110 274 DVTREKSLGKRFDIKGFPTLKYF-RAGSVAFDAGHLRDASRLVEFMRDPT 322 (366)
Q Consensus 274 d~~~~~~l~~~~~I~~~Ptl~~f-k~G~~~~~~~g~~~~e~l~~fi~~~~ 322 (366)
.+.+..+++.|+|.++|+++++ ++|+++ .+.|..+.+.|.++|++.+
T Consensus 87 -~d~~~~~~~~~~i~~~P~~~~id~~g~i~-~~~g~~~~~~l~~~l~~~l 134 (136)
T 1zzo_A 87 -ADTDGSVWANFGVTQQPAYAFVDPHGNVD-VVRGRMSQDELTRRVTALT 134 (136)
T ss_dssp -ECTTCHHHHHTTCCSSSEEEEECTTCCEE-EEESCCCHHHHHHHHHHHC
T ss_pred -EcCCcHHHHHcCCCCCceEEEECCCCCEE-EEecCCCHHHHHHHHHHHh
Confidence 1345678899999999999999 699988 9999999999999987654
No 130
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=99.39 E-value=3.4e-13 Score=112.89 Aligned_cols=112 Identities=13% Similarity=0.176 Sum_probs=83.8
Q ss_pred cCCeEEEEEECCCChhhhcccHHHHHHHHHHhcc-ccEEEeeccCCcccccccceeeeeecCCCcccccCCCCCCCCCCC
Q psy1110 115 EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQ-RAYYGMGMLRHRPQASNVAVVSSLRNKNGEPTTHPSGTPQTSDTP 193 (366)
Q Consensus 115 ~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~-v~~~~v~~~~~~~~~~~~~v~~~l~~~~G~~~~~~~g~~~~~~~~ 193 (366)
.+++++|.||++||++|+.+.|.+.+++++|.+. +.++.|+++++.+....+.
T Consensus 30 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~-------------------------- 83 (148)
T 3hcz_A 30 QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRAKGIQVYAANIERKDEEWLKFI-------------------------- 83 (148)
T ss_dssp CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGGGTEEEEEEECCSSSHHHHHHH--------------------------
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCEEEEEEEecCCHHHHHHHH--------------------------
Confidence 5799999999999999999999999999999887 9999999986554222220
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccCCCCCCCCccceeEEEE
Q psy1110 194 RTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSINSGSFSPRQITGILAAV 273 (366)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~~~~~~~~~~~v~~a~v 273 (366)
+...-.+ . ....
T Consensus 84 --------------------------------~~~~~~~-----------------------------------~-~~~~ 95 (148)
T 3hcz_A 84 --------------------------------RSKKIGG-----------------------------------W-LNVR 95 (148)
T ss_dssp --------------------------------HHHTCTT-----------------------------------S-EEEE
T ss_pred --------------------------------HHcCCCC-----------------------------------c-eEEe
Confidence 0000000 1 1122
Q ss_pred ecccccccccccccccCCeEEEe-cCCceeeecCCCCCHHHHHHHHhC
Q psy1110 274 DVTREKSLGKRFDIKGFPTLKYF-RAGSVAFDAGHLRDASRLVEFMRD 320 (366)
Q Consensus 274 d~~~~~~l~~~~~I~~~Ptl~~f-k~G~~~~~~~g~~~~e~l~~fi~~ 320 (366)
|......++..|+|.++|+++++ ++|+++.++.|..+.+++++.+.+
T Consensus 96 d~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~~l~~l~~ 143 (148)
T 3hcz_A 96 DSKNHTDFKITYDIYATPVLYVLDKNKVIIAKRIGYENLDDFLVQYEK 143 (148)
T ss_dssp CTTCCCCHHHHHCCCSSCEEEEECTTCBEEEESCCGGGHHHHHHHHHH
T ss_pred ccccchhHHHhcCcCCCCEEEEECCCCcEEEecCCHHHHHHHHHHHHH
Confidence 43333448899999999999999 899999999998888888877654
No 131
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=99.39 E-value=1.2e-12 Score=110.04 Aligned_cols=48 Identities=8% Similarity=0.115 Sum_probs=42.1
Q ss_pred cCCeEEEEEECCCChhhhcccHHHHH---HHHHHhcc-ccEEEeeccCCccc
Q psy1110 115 EESSVLVMFYAPWCGHCKKLKPEYEE---AAATMKQQ-RAYYGMGMLRHRPQ 162 (366)
Q Consensus 115 ~~k~vlV~F~a~wC~~Ck~~~p~~e~---la~~~~~~-v~~~~v~~~~~~~~ 162 (366)
.+++++|.|||+||++|+...|.+.+ ++++|++. +.++.|++++..+.
T Consensus 30 ~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~~~~~~vi~i~~d~~~~~ 81 (142)
T 3eur_A 30 PAEYTLLFINNPGCHACAEMIEGLKASPVINGFTAAKKLKVLSIYPDEELDE 81 (142)
T ss_dssp CCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHHTTSEEEEEEECSSCHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhccCCeEEEEEEcCCCHHH
Confidence 46999999999999999999999999 99999754 89999998876543
No 132
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=99.38 E-value=5.3e-13 Score=112.74 Aligned_cols=116 Identities=20% Similarity=0.290 Sum_probs=85.3
Q ss_pred cCCeEEEEEECCCChhhhcccHHHHHHHHHHhcc-ccEEEeeccCCcccccccceeeeeecCCCcccccCCCCCCCCCCC
Q psy1110 115 EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQ-RAYYGMGMLRHRPQASNVAVVSSLRNKNGEPTTHPSGTPQTSDTP 193 (366)
Q Consensus 115 ~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~-v~~~~v~~~~~~~~~~~~~v~~~l~~~~G~~~~~~~g~~~~~~~~ 193 (366)
.+++++|.||++||++|+.+.|.+.+++++|.+. +.++.++++........+.
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~-------------------------- 80 (152)
T 3gl3_A 27 TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVVAVNLDAKTGDAMKFL-------------------------- 80 (152)
T ss_dssp TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSHHHHHHHH--------------------------
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEEEEECCCCHHHHHHHH--------------------------
Confidence 5789999999999999999999999999999887 8999999886543322220
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccCCCCCCCCccceeEEEE
Q psy1110 194 RTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSINSGSFSPRQITGILAAV 273 (366)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~~~~~~~~~~~v~~a~v 273 (366)
..+ ..+..+.
T Consensus 81 ------------------------------------~~~--------------------------------~~~~~~~-- 90 (152)
T 3gl3_A 81 ------------------------------------AQV--------------------------------PAEFTVA-- 90 (152)
T ss_dssp ------------------------------------HHS--------------------------------CCCSEEE--
T ss_pred ------------------------------------HHc--------------------------------CCCCcee--
Confidence 000 0001111
Q ss_pred ecccccccccccccccCCeEEEe-cCCceeeecCCCC--CHHHHHHHHhCCCCCCCC
Q psy1110 274 DVTREKSLGKRFDIKGFPTLKYF-RAGSVAFDAGHLR--DASRLVEFMRDPTEPPPP 327 (366)
Q Consensus 274 d~~~~~~l~~~~~I~~~Ptl~~f-k~G~~~~~~~g~~--~~e~l~~fi~~~~~~~~~ 327 (366)
.+....+++.|+|+++|+++++ ++|+++.++.|.. +.+.|.++|++.+.....
T Consensus 91 -~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~i~~~~~~~~~ 146 (152)
T 3gl3_A 91 -FDPKGQTPRLYGVKGMPTSFLIDRNGKVLLQHVGFRPADKEALEQQILAALGGNEG 146 (152)
T ss_dssp -ECTTCHHHHHTTCCSSSEEEEECTTSBEEEEEESCCTTTHHHHHHHHHHHTC----
T ss_pred -ECCcchhHHHcCCCCCCeEEEECCCCCEEEEEccCCCcCHHHHHHHHHHHHccccc
Confidence 2345578899999999998888 8999999898865 457999999988765543
No 133
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=99.38 E-value=4.8e-13 Score=113.06 Aligned_cols=115 Identities=11% Similarity=0.228 Sum_probs=86.5
Q ss_pred cCCeEEEEEECCCChhhhcccHHHHHHHHHHhcc-ccEEEeeccCCcccccccceeeeeecCCCcccccCCCCCCCCCCC
Q psy1110 115 EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQ-RAYYGMGMLRHRPQASNVAVVSSLRNKNGEPTTHPSGTPQTSDTP 193 (366)
Q Consensus 115 ~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~-v~~~~v~~~~~~~~~~~~~v~~~l~~~~G~~~~~~~g~~~~~~~~ 193 (366)
.+++++|.||++||++|+.+.|.+.++++.+.+. +.++.|+++...+....+.
T Consensus 29 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v~v~~d~~~~~~~~~~-------------------------- 82 (152)
T 2lja_A 29 KGKYIYIDVWATWCGPCRGELPALKELEEKYAGKDIHFVSLSCDKNKKAWENMV-------------------------- 82 (152)
T ss_dssp TTSEEEEEECCSSCCGGGGTHHHHHHHHHHSTTSSEEEEEEECCSCHHHHHHHH--------------------------
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhccCCeEEEEEEccCcHHHHHHHH--------------------------
Confidence 5799999999999999999999999999999875 8899999886543222210
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccCCCCCCCCccceeEEEE
Q psy1110 194 RTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSINSGSFSPRQITGILAAV 273 (366)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~~~~~~~~~~~v~~a~v 273 (366)
.. + ++.+..+
T Consensus 83 -----------------------------------~~-~----------------------------------~~~~~~~ 92 (152)
T 2lja_A 83 -----------------------------------TK-D----------------------------------QLKGIQL 92 (152)
T ss_dssp -----------------------------------HH-H----------------------------------TCCSEEE
T ss_pred -----------------------------------Hh-c----------------------------------CCCCcee
Confidence 00 0 0001112
Q ss_pred ecccccccccccccccCCeEEEec-CCceeeecCCCCCHHHHHHHHhCCCCCC
Q psy1110 274 DVTREKSLGKRFDIKGFPTLKYFR-AGSVAFDAGHLRDASRLVEFMRDPTEPP 325 (366)
Q Consensus 274 d~~~~~~l~~~~~I~~~Ptl~~fk-~G~~~~~~~g~~~~e~l~~fi~~~~~~~ 325 (366)
-.+.+..+.+.|+|+++|+++++. +|+++.++.|..+.+.|.++|++.....
T Consensus 93 ~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~~ 145 (152)
T 2lja_A 93 HMGTDRTFMDAYLINGIPRFILLDRDGKIISANMTRPSDPKTAEKFNELLGLE 145 (152)
T ss_dssp ECSSCTHHHHHTTCCSSCCEEEECTTSCEEESSCCCTTCHHHHHHHHHHHTCC
T ss_pred ecCcchhHHHHcCcCCCCEEEEECCCCeEEEccCCCCCHHHHHHHHHHHhccc
Confidence 233456788999999999999995 9999999999889999999988765544
No 134
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=99.38 E-value=8.3e-13 Score=114.37 Aligned_cols=34 Identities=12% Similarity=0.209 Sum_probs=29.0
Q ss_pred hhhhhccCCeEEEEEECCCChhhhcccHHHHHHH
Q psy1110 109 FDLVIQEESSVLVMFYAPWCGHCKKLKPEYEEAA 142 (366)
Q Consensus 109 ~~~~i~~~k~vlV~F~a~wC~~Ck~~~p~~e~la 142 (366)
+.....++++++|+|||+||++|+.+.|.+.+..
T Consensus 37 l~~A~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~ 70 (151)
T 3ph9_A 37 LFYAQKSKKPLMVIHHLEDCQYSQALKKVFAQNE 70 (151)
T ss_dssp HHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHCH
T ss_pred HHHHHHcCCcEEEEEECCCCHhHHHHHHHHhcCH
Confidence 4445567999999999999999999999998753
No 135
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=99.37 E-value=1.1e-12 Score=107.44 Aligned_cols=116 Identities=15% Similarity=0.299 Sum_probs=82.3
Q ss_pred cCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCCCcccccCCCCCCCCCCCc
Q psy1110 115 EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKNGEPTTHPSGTPQTSDTPR 194 (366)
Q Consensus 115 ~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~G~~~~~~~g~~~~~~~~~ 194 (366)
.+++++|.||++||++|+.+.|.++++++++...+.++.+++..........
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~v~i~~~~~~~~~~~~---------------------------- 72 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEAGDDYVVLTVVSPGHKGEQSEA---------------------------- 72 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHTCTTTEEEEEEECTTSTTCCCHH----------------------------
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCCCcEEEEEEcCCCCchhhHH----------------------------
Confidence 5799999999999999999999999999998777888888653321100000
Q ss_pred cccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccCCCCCCCCccceeEEEEe
Q psy1110 195 TQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSINSGSFSPRQITGILAAVD 274 (366)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~~~~~~~~~~~v~~a~vd 274 (366)
...+......+ .++.+ .
T Consensus 73 ----------------------------~~~~~~~~~~~--------------------------------~~~~~---~ 89 (138)
T 4evm_A 73 ----------------------------DFKNWYKGLDY--------------------------------KNLPV---L 89 (138)
T ss_dssp ----------------------------HHHHHHTTCCC--------------------------------TTCCE---E
T ss_pred ----------------------------HHHHHHhhcCC--------------------------------CCeeE---E
Confidence 00000000000 00111 1
Q ss_pred cccccccccccccccCCeEEEe-cCCceeeecCCCCCHHHHHHHHhCC
Q psy1110 275 VTREKSLGKRFDIKGFPTLKYF-RAGSVAFDAGHLRDASRLVEFMRDP 321 (366)
Q Consensus 275 ~~~~~~l~~~~~I~~~Ptl~~f-k~G~~~~~~~g~~~~e~l~~fi~~~ 321 (366)
.+.+..+.+.|+|+++|+++++ ++|+++.++.|..+.+.|.++|++.
T Consensus 90 ~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 137 (138)
T 4evm_A 90 VDPSGKLLETYGVRSYPTQAFIDKEGKLVKTHPGFMEKDAILQTLKEL 137 (138)
T ss_dssp ECTTCHHHHHTTCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHHC
T ss_pred ECcchHHHHHcCcccCCeEEEECCCCcEEEeecCCCcHHHHHHHHHhh
Confidence 2445678999999999999999 8999999999999999999998753
No 136
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=99.37 E-value=1.1e-12 Score=109.28 Aligned_cols=111 Identities=16% Similarity=0.274 Sum_probs=82.6
Q ss_pred cCCeEEEEEECCCChhhhcccHHHHHHHHHHh-ccccEEEeeccCCcccccccceeeeeecCCCcccccCCCCCCCCCCC
Q psy1110 115 EESSVLVMFYAPWCGHCKKLKPEYEEAAATMK-QQRAYYGMGMLRHRPQASNVAVVSSLRNKNGEPTTHPSGTPQTSDTP 193 (366)
Q Consensus 115 ~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~-~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~G~~~~~~~g~~~~~~~~ 193 (366)
.+++++|.||++||++|+.+.|.+.++++++. ..+.++.++++..++.....
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~--------------------------- 85 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHPSDSVKLVTVNLVNSEQNQQVV--------------------------- 85 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCCCSSEEEEEEECGGGSSCHHHH---------------------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcCCCCEEEEEEEccCCcCCHHHH---------------------------
Confidence 57999999999999999999999999999998 45899999987532211111
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccCCCCCCCCccceeEEEE
Q psy1110 194 RTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSINSGSFSPRQITGILAAV 273 (366)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~~~~~~~~~~~v~~a~v 273 (366)
.-+...+. .+..+.
T Consensus 86 --------------------------------~~~~~~~~--------------------------------~~~~~~-- 99 (145)
T 3erw_A 86 --------------------------------EDFIKANK--------------------------------LTFPIV-- 99 (145)
T ss_dssp --------------------------------HHHHHHTT--------------------------------CCSCEE--
T ss_pred --------------------------------HHHHHHcC--------------------------------CceeEE--
Confidence 00000000 001111
Q ss_pred ecccccccccccccccCCeEEEe-cCCceeeecCCCCCHHHHHHHHh
Q psy1110 274 DVTREKSLGKRFDIKGFPTLKYF-RAGSVAFDAGHLRDASRLVEFMR 319 (366)
Q Consensus 274 d~~~~~~l~~~~~I~~~Ptl~~f-k~G~~~~~~~g~~~~e~l~~fi~ 319 (366)
.+.+..+++.|+|.++|+++++ ++|+++..+.|..+.+.|.++|+
T Consensus 100 -~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~ 145 (145)
T 3erw_A 100 -LDSKGELMKEYHIITIPTSFLLNEKGEIEKTKIGPMTAEQLKEWTE 145 (145)
T ss_dssp -ECSSSHHHHHTTCCEESEEEEECTTCCEEEEEESCCCHHHHHHHHC
T ss_pred -EcCchhHHHhcCcCccCeEEEEcCCCcEEEEEcCCcCHHHHHHhhC
Confidence 2345678999999999999999 89999999999999999998874
No 137
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=99.36 E-value=2.4e-12 Score=107.57 Aligned_cols=48 Identities=17% Similarity=0.400 Sum_probs=42.1
Q ss_pred cCCeEEEEEECCCChhhhcccHHHHH---HHHHHhcc-ccEEEeeccCCccc
Q psy1110 115 EESSVLVMFYAPWCGHCKKLKPEYEE---AAATMKQQ-RAYYGMGMLRHRPQ 162 (366)
Q Consensus 115 ~~k~vlV~F~a~wC~~Ck~~~p~~e~---la~~~~~~-v~~~~v~~~~~~~~ 162 (366)
.+++++|.||++||++|+.+.|.+.+ +++.|.+. +.++.|++++..+.
T Consensus 26 ~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~~~~~~v~v~~d~~~~~ 77 (142)
T 3ewl_A 26 KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVENGTLRVLAIYPDENREE 77 (142)
T ss_dssp CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHHTSEEEEEEECSSCHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhccCCeEEEEEEecCCHHH
Confidence 57999999999999999999999998 88888765 89999998865543
No 138
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=99.36 E-value=1.7e-12 Score=110.06 Aligned_cols=113 Identities=20% Similarity=0.284 Sum_probs=84.5
Q ss_pred CeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeecc--CCcccccccceeeeeecCCCcccccCCCCCCCCCCCc
Q psy1110 117 SSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGML--RHRPQASNVAVVSSLRNKNGEPTTHPSGTPQTSDTPR 194 (366)
Q Consensus 117 k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~--~~~~~~~~~~v~~~l~~~~G~~~~~~~g~~~~~~~~~ 194 (366)
++++|.||++||++|+.+.|.+.++++++ .+.++.|+++ +..+....+
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~--~v~~v~v~~d~~~~~~~~~~~---------------------------- 80 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET--GVPFYVISREPRDTREVVLEY---------------------------- 80 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH--CCCEEEEECCTTCCHHHHHHH----------------------------
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc--CCeEEEEeCCCcccHHHHHHH----------------------------
Confidence 89999999999999999999999999999 7889999984 222211111
Q ss_pred cccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccCCCCCCCCccceeEEEEe
Q psy1110 195 TQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSINSGSFSPRQITGILAAVD 274 (366)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~~~~~~~~~~~v~~a~vd 274 (366)
...+ +.+..+..-+
T Consensus 81 ----------------------------------~~~~--------------------------------~~~~~~~~d~ 94 (154)
T 3ia1_A 81 ----------------------------------MKTY--------------------------------PRFIPLLASD 94 (154)
T ss_dssp ----------------------------------HTTC--------------------------------TTEEECBCCS
T ss_pred ----------------------------------HHHc--------------------------------CCCccccccc
Confidence 0000 0001111001
Q ss_pred cccccccccccccccCCeEEEe-cCCceeeecCCCCCHHHHHHHHhCCCCCC
Q psy1110 275 VTREKSLGKRFDIKGFPTLKYF-RAGSVAFDAGHLRDASRLVEFMRDPTEPP 325 (366)
Q Consensus 275 ~~~~~~l~~~~~I~~~Ptl~~f-k~G~~~~~~~g~~~~e~l~~fi~~~~~~~ 325 (366)
......+++.|+|.++|+++++ ++|+++..+.|..+.+.|.++|+++.+..
T Consensus 95 ~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~~ 146 (154)
T 3ia1_A 95 RDRPHEVAARFKVLGQPWTFVVDREGKVVALFAGRAGREALLDALLLAGADL 146 (154)
T ss_dssp SCCHHHHHTTSSBCSSCEEEEECTTSEEEEEEESBCCHHHHHHHHHHTTCCC
T ss_pred ccchHHHHHHhCCCcccEEEEECCCCCEEEEEcCCCCHHHHHHHHHhccCcc
Confidence 2356788999999999997777 89999999999999999999999988765
No 139
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=99.35 E-value=7e-13 Score=110.96 Aligned_cols=61 Identities=20% Similarity=0.418 Sum_probs=48.0
Q ss_pred CCCCCceEEecchhhhhhhccCCeEEEEEECCCChhhhcccHHHHHHHHHH-hcc-ccEEEeeccCCc
Q psy1110 95 ADTESEVVHLTDDNFDLVIQEESSVLVMFYAPWCGHCKKLKPEYEEAAATM-KQQ-RAYYGMGMLRHR 160 (366)
Q Consensus 95 ~~~~~~v~~l~~~~~~~~i~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~-~~~-v~~~~v~~~~~~ 160 (366)
.+..+....|+++++ .+++++|.||++||++|+.+.|.+.+++++| .+. +.++.|+++...
T Consensus 17 ~~~~g~~~~l~~~~~-----~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~ 79 (148)
T 3fkf_A 17 PNEKGEKLSRSAERF-----RNRYLLLNFWASWCDPQPEANAELKRLNKEYKKNKNFAMLGISLDIDR 79 (148)
T ss_dssp EBTTSCEECTTSTTT-----TTSEEEEEEECGGGCCCHHHHHHHHHHHHHTTTCTTEEEEEEECCSCH
T ss_pred eCCCCCEEecccccc-----CCcEEEEEEECCCCHHHHHHhHHHHHHHHHhcCCCCeEEEEEECCCCH
Confidence 344445545542222 6799999999999999999999999999999 665 899999988754
No 140
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=99.34 E-value=2.1e-12 Score=110.39 Aligned_cols=52 Identities=21% Similarity=0.538 Sum_probs=45.5
Q ss_pred cCCeEEEEEECCCChhhhcccHHHHHHHHHHhcc-ccEEEeeccCCccccccc
Q psy1110 115 EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQ-RAYYGMGMLRHRPQASNV 166 (366)
Q Consensus 115 ~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~-v~~~~v~~~~~~~~~~~~ 166 (366)
.+++++|.||++||++|+.+.|.+.+++++|.+. +.++.|++++....+..+
T Consensus 33 ~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~~~~v~~v~v~~d~~~~~~~~~ 85 (165)
T 3or5_A 33 KGKAYIVNFFATWCPPCRSEIPDMVQVQKTWASRGFTFVGIAVNEQLPNVKNY 85 (165)
T ss_dssp TTCEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTTEEEEEEECSCCHHHHHHH
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhccCCeEEEEEECCCCHHHHHHH
Confidence 5799999999999999999999999999999876 999999998766544444
No 141
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=99.34 E-value=1.3e-13 Score=112.17 Aligned_cols=39 Identities=15% Similarity=0.103 Sum_probs=33.6
Q ss_pred cccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhC
Q psy1110 277 REKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRD 320 (366)
Q Consensus 277 ~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~ 320 (366)
.+..++..|+|+++||+++ +|+ .+.|.++.+.|.+|+.-
T Consensus 54 ~~~~l~~~~~V~~~PT~~i--~G~---~~~G~~~~~~l~~~~~~ 92 (106)
T 3kp8_A 54 PQAQECTEAGITSYPTWII--NGR---TYTGVRSLEALAVASGY 92 (106)
T ss_dssp CCCHHHHHTTCCSSSEEEE--TTE---EEESCCCHHHHHHHHTC
T ss_pred hhHHHHHHcCCeEeCEEEE--CCE---EecCCCCHHHHHHHhCC
Confidence 4668899999999999887 887 38899999999999853
No 142
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=99.34 E-value=5.2e-12 Score=107.24 Aligned_cols=46 Identities=26% Similarity=0.441 Sum_probs=41.8
Q ss_pred cCCeEEEEEECCCChhhhcccHHHHHHHHHHhcc-ccEEEeeccCCc
Q psy1110 115 EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQ-RAYYGMGMLRHR 160 (366)
Q Consensus 115 ~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~-v~~~~v~~~~~~ 160 (366)
.+++++|.||++||++|+.+.|.+.+++++|.+. +.++.|+++...
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~~ 74 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKDKGFTIYGVSTDRRE 74 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTTTTEEEEEEECCSCH
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhccCCeEEEEEEccCCH
Confidence 5799999999999999999999999999999876 899999988643
No 143
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=99.33 E-value=1.1e-12 Score=116.17 Aligned_cols=45 Identities=20% Similarity=0.406 Sum_probs=37.4
Q ss_pred ecchhhhhhhccCCeEEEEEECCCChhhhcccH-HH--HHHHHHHhcc
Q psy1110 104 LTDDNFDLVIQEESSVLVMFYAPWCGHCKKLKP-EY--EEAAATMKQQ 148 (366)
Q Consensus 104 l~~~~~~~~i~~~k~vlV~F~a~wC~~Ck~~~p-~~--e~la~~~~~~ 148 (366)
..++.|+....++++|+|+|||+||++|+.+.| .| .++++.++++
T Consensus 27 ~~~ea~~~A~~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~~~ 74 (173)
T 3ira_A 27 WGEEAFEKARKENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMNEA 74 (173)
T ss_dssp SSHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred cCHHHHHHHHHhCCCEEEecccchhHhhccccccccCCHHHHHHHHhc
Confidence 345778888888999999999999999999999 33 5777777666
No 144
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=99.32 E-value=5.5e-12 Score=107.72 Aligned_cols=51 Identities=12% Similarity=-0.003 Sum_probs=44.5
Q ss_pred cCCeEEEEEECCCChhhhcccHHHHHHHHHHhcc-ccEEEeeccCCcccccc
Q psy1110 115 EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQ-RAYYGMGMLRHRPQASN 165 (366)
Q Consensus 115 ~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~-v~~~~v~~~~~~~~~~~ 165 (366)
.+++++|.||++||++|+...|.+.+++++|.+. +.++.|+++...+..+.
T Consensus 34 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~i~~d~~~~~~~~ 85 (152)
T 2lrt_A 34 KGKVVLIDFTVYNNAMSAAHNLALRELYNKYASQGFEIYQISLDGDEHFWKT 85 (152)
T ss_dssp GGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECSCCHHHHHH
T ss_pred CCCEEEEEEEcCCChhhHHHHHHHHHHHHHhccCCeEEEEEEccCCHHHHHH
Confidence 4789999999999999999999999999999876 99999999876554333
No 145
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=99.30 E-value=2.9e-12 Score=112.63 Aligned_cols=44 Identities=16% Similarity=0.201 Sum_probs=35.2
Q ss_pred Eecchhhhhhhc-cCCeEEEEEECCCChhhhcccHHHHHHHHHHh
Q psy1110 103 HLTDDNFDLVIQ-EESSVLVMFYAPWCGHCKKLKPEYEEAAATMK 146 (366)
Q Consensus 103 ~l~~~~~~~~i~-~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~ 146 (366)
.++++.+..+-. .+++++|.|||+||++|+.+.|.++++++.+.
T Consensus 40 ~~~~~~~~~l~~~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~~ 84 (167)
T 1z6n_A 40 GLPSALTERLQRIERRYRLLVAGEMWCPDCQINLAALDFAQRLQP 84 (167)
T ss_dssp CCCHHHHHHHHTCCSCEEEEEECCTTCHHHHHHHHHHHHHHHHCT
T ss_pred CCCHHHHHHHHHhCCCEEEEEEECCCChhHHHHHHHHHHHHHHCC
Confidence 455555555432 46899999999999999999999999998764
No 146
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=99.30 E-value=3.9e-12 Score=107.49 Aligned_cols=113 Identities=16% Similarity=0.226 Sum_probs=84.0
Q ss_pred cCCeEEEEEECCCChhhhcccHHHHHHHHHHhcc-ccEEEeeccCCcc-cccccceeeeeecCCCcccccCCCCCCCCCC
Q psy1110 115 EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQ-RAYYGMGMLRHRP-QASNVAVVSSLRNKNGEPTTHPSGTPQTSDT 192 (366)
Q Consensus 115 ~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~-v~~~~v~~~~~~~-~~~~~~v~~~l~~~~G~~~~~~~g~~~~~~~ 192 (366)
.+++++|.||++||++|+.+.|.+.++++.+.+. +.++.++.+.... ....+
T Consensus 27 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~-------------------------- 80 (153)
T 2l5o_A 27 QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKNKNFQVLAVAQPIDPIESVRQY-------------------------- 80 (153)
T ss_dssp TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGGTTEEEEEEECTTSCHHHHHHH--------------------------
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhccCCeEEEEEecCCCCHHHHHHH--------------------------
Confidence 5799999999999999999999999999999875 8888887643211 00111
Q ss_pred CccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccCCCCCCCCccceeEEE
Q psy1110 193 PRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSINSGSFSPRQITGILAA 272 (366)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~~~~~~~~~~~v~~a~ 272 (366)
...+ +.+. .
T Consensus 81 ------------------------------------~~~~--------------------------------~~~~---~ 89 (153)
T 2l5o_A 81 ------------------------------------VKDY--------------------------------GLPF---T 89 (153)
T ss_dssp ------------------------------------HHHT--------------------------------TCCS---E
T ss_pred ------------------------------------HHHc--------------------------------CCCc---e
Confidence 0000 0001 1
Q ss_pred EecccccccccccccccCCeEEEe-cCCceeeecCCCCCHHHHHHHHhCCCCC
Q psy1110 273 VDVTREKSLGKRFDIKGFPTLKYF-RAGSVAFDAGHLRDASRLVEFMRDPTEP 324 (366)
Q Consensus 273 vd~~~~~~l~~~~~I~~~Ptl~~f-k~G~~~~~~~g~~~~e~l~~fi~~~~~~ 324 (366)
+..+.+..+++.|+|+++|+++++ ++|+++..+.|..+.+.|.++|++.+..
T Consensus 90 ~~~d~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~~ 142 (153)
T 2l5o_A 90 VMYDADKAVGQAFGTQVYPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTAWRN 142 (153)
T ss_dssp EEECSSCHHHHHHTCCSSSEEEEECSSSCCCEEEESSCCHHHHHHHHHHHHHC
T ss_pred EEcCchHHHHHHcCCCccCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 223456678999999999999988 8999999999999999999988766543
No 147
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=99.29 E-value=3.3e-12 Score=118.50 Aligned_cols=83 Identities=8% Similarity=0.059 Sum_probs=60.1
Q ss_pred eeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCCCCCCCCCCCCCCCCCCCeeEEechh
Q psy1110 268 GILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPTEPPPPPPPEPAWAEEPSEVYHLGAD 347 (366)
Q Consensus 268 v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~~~~~~~~~~~~~~~~~~~v~~lt~~ 347 (366)
+.++++|++.+..++.+|+|+++||+++| +| ..+|.|.++.+.+.+|+........+ -..++.+
T Consensus 65 v~~~~vd~d~~~~~~~~~gv~~~Pt~~i~-~g--~~~~~G~~~~~~l~~fv~~~l~~~~~-------------~~~l~~~ 128 (243)
T 2hls_A 65 LKLNVYYRESDSDKFSEFKVERVPTVAFL-GG--EVRWTGIPAGEEIRALVEVIMRLSED-------------ESGLEDA 128 (243)
T ss_dssp EEEEEEETTTTHHHHHHTTCCSSSEEEET-TT--TEEEESCCCTTHHHHHHHHHHHHHTT-------------CCCCCHH
T ss_pred eEEEEecCCcCHHHHHhcCCCcCCEEEEE-CC--ceeEcCCCcHHHHHHHHHHHHhccCC-------------CCCCCHH
Confidence 77899999999999999999999999999 67 67888888888888887654311100 0124455
Q ss_pred cHHHHhhc-cCceEEEEecC
Q psy1110 348 NFASTLRK-KKHALVMFYAP 366 (366)
Q Consensus 348 ~~~~~~~~-~~~~~v~fy~~ 366 (366)
.++.+-.. ++..+++||||
T Consensus 129 ~~~~~~~~~~~~~vv~F~a~ 148 (243)
T 2hls_A 129 TKEALKSLKGRVHIETIITP 148 (243)
T ss_dssp HHHHHHHCCSCEEEEEEECS
T ss_pred HHHHHHHcCCCcEEEEEECC
Confidence 66655443 44568889987
No 148
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=99.29 E-value=7.2e-12 Score=106.55 Aligned_cols=114 Identities=15% Similarity=0.166 Sum_probs=82.5
Q ss_pred cCCeEEEEEECCCChhhhcc-cHHHHHHHHHHhc-cccEEEeeccC------CcccccccceeeeeecCCCcccccCCCC
Q psy1110 115 EESSVLVMFYAPWCGHCKKL-KPEYEEAAATMKQ-QRAYYGMGMLR------HRPQASNVAVVSSLRNKNGEPTTHPSGT 186 (366)
Q Consensus 115 ~~k~vlV~F~a~wC~~Ck~~-~p~~e~la~~~~~-~v~~~~v~~~~------~~~~~~~~~v~~~l~~~~G~~~~~~~g~ 186 (366)
.+++++|.||++||++|+.. .|.+.+++++|.+ .+.++.|+++. ..+..+.+
T Consensus 27 ~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~-------------------- 86 (158)
T 3eyt_A 27 RGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLGLHTVFEHHEAMTPISLKAF-------------------- 86 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHH--------------------
T ss_pred CCCEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEEEEecccccccCCHHHHHHH--------------------
Confidence 47999999999999999996 9999999999985 48999998752 11111111
Q ss_pred CCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccCCCCCCCCcc
Q psy1110 187 PQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSINSGSFSPRQI 266 (366)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~~~~~~~~~~ 266 (366)
...+ +.
T Consensus 87 ------------------------------------------~~~~--------------------------------~~ 92 (158)
T 3eyt_A 87 ------------------------------------------LHEY--------------------------------RI 92 (158)
T ss_dssp ------------------------------------------HHHT--------------------------------TC
T ss_pred ------------------------------------------HHHc--------------------------------CC
Confidence 0000 00
Q ss_pred ceeEEEEeccccc---ccccccccccCCeEEEe-cCCceeeecCCCCCHHHHHHHHhCCCC
Q psy1110 267 TGILAAVDVTREK---SLGKRFDIKGFPTLKYF-RAGSVAFDAGHLRDASRLVEFMRDPTE 323 (366)
Q Consensus 267 ~v~~a~vd~~~~~---~l~~~~~I~~~Ptl~~f-k~G~~~~~~~g~~~~e~l~~fi~~~~~ 323 (366)
+.. ..+|..... .+.+.|+|.++|+++++ ++|+++.++.|..+.+.|.++|++.+.
T Consensus 93 ~~~-~~~d~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 152 (158)
T 3eyt_A 93 KFP-VGVDQPGDGAMPRTMAAYQMRGTPSLLLIDKAGDLRAHHFGDVSELLLGAEIATLLG 152 (158)
T ss_dssp CSC-EEEECCCSSSSCHHHHHTTCCSSSEEEEECTTSEEEEEEESCCCHHHHHHHHHHHHT
T ss_pred Cce-EEEcCccchhhHHHHHHcCCCCCCEEEEECCCCCEEEEEeCCCCHHHHHHHHHHHhc
Confidence 011 112332221 58899999999998888 899999999999999999988887664
No 149
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.28 E-value=1.9e-12 Score=109.65 Aligned_cols=109 Identities=17% Similarity=0.300 Sum_probs=81.0
Q ss_pred cCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCCCcccccCCCCCCCCCCCc
Q psy1110 115 EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKNGEPTTHPSGTPQTSDTPR 194 (366)
Q Consensus 115 ~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~G~~~~~~~g~~~~~~~~~ 194 (366)
.+++++|.||++||++|+.+.|.+++++++ +++.++.++++++.+....+.
T Consensus 41 ~gk~~ll~f~~~~C~~C~~~~~~l~~l~~~--~~v~~v~v~~~~~~~~~~~~~--------------------------- 91 (156)
T 1kng_A 41 KGKVSLVNVWASWCVPCHDEAPLLTELGKD--KRFQLVGINYKDAADNARRFL--------------------------- 91 (156)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHTTC--TTSEEEEEEESCCHHHHHHHH---------------------------
T ss_pred CCCEEEEEEEcccCHhHHHHHHHHHHHHhc--CCeEEEEEECCCCHHHHHHHH---------------------------
Confidence 478999999999999999999999999876 558999999876544322221
Q ss_pred cccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccCCCCCCCCccceeEEEEe
Q psy1110 195 TQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSINSGSFSPRQITGILAAVD 274 (366)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~~~~~~~~~~~v~~a~vd 274 (366)
..+ ++.+..+.
T Consensus 92 -----------------------------------~~~----------------------------------~~~~~~~~ 102 (156)
T 1kng_A 92 -----------------------------------GRY----------------------------------GNPFGRVG 102 (156)
T ss_dssp -----------------------------------HHH----------------------------------CCCCSEEE
T ss_pred -----------------------------------HHc----------------------------------CCCCceee
Confidence 000 01111123
Q ss_pred cccccccccccccccCCeEEEe-cCCceeeecCCCCCHHHHHHHHhCC
Q psy1110 275 VTREKSLGKRFDIKGFPTLKYF-RAGSVAFDAGHLRDASRLVEFMRDP 321 (366)
Q Consensus 275 ~~~~~~l~~~~~I~~~Ptl~~f-k~G~~~~~~~g~~~~e~l~~fi~~~ 321 (366)
.+....++..|+|+++|+++++ ++|+++.++.|..+.+.|.++|++.
T Consensus 103 ~d~~~~~~~~~~v~~~P~~~~id~~G~i~~~~~g~~~~~~l~~~l~~~ 150 (156)
T 1kng_A 103 VDANGRASIEWGVYGVPETFVVGREGTIVYKLVGPITPDNLRSVLLPQ 150 (156)
T ss_dssp EETTSHHHHHTTCCSSCEEEEECTTSBEEEEEESCCCHHHHHHTHHHH
T ss_pred eCchhHHHHhcCcCccCeEEEEcCCCCEEEEEeCCCCHHHHHHHHHHH
Confidence 4456788899999999965555 8999999999999999888887654
No 150
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=99.28 E-value=1.1e-11 Score=104.76 Aligned_cols=114 Identities=18% Similarity=0.313 Sum_probs=81.8
Q ss_pred cCCeEEEEEECCCChhhhcccHHHHHHHHHHhc-cccEEEeeccCC-cccccccceeeeeecCCCcccccCCCCCCCCCC
Q psy1110 115 EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQ-QRAYYGMGMLRH-RPQASNVAVVSSLRNKNGEPTTHPSGTPQTSDT 192 (366)
Q Consensus 115 ~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~-~v~~~~v~~~~~-~~~~~~~~v~~~l~~~~G~~~~~~~g~~~~~~~ 192 (366)
.+++++|.||++||++|+.+.|.+.++++.+.+ .+.++.|+++.. .+....+
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~~~~~~~~~-------------------------- 80 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMAGKPFRMLCVSIDEGGKVAVEEF-------------------------- 80 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTTTSSEEEEEEECCTTHHHHHHHH--------------------------
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCeEEEEEEcCCcchHHHHHH--------------------------
Confidence 579999999999999999999999999999987 488999988765 2211111
Q ss_pred CccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccCCCCCCCCccceeEEE
Q psy1110 193 PRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSINSGSFSPRQITGILAA 272 (366)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~~~~~~~~~~~v~~a~ 272 (366)
...+ +.+..+.
T Consensus 81 ------------------------------------~~~~--------------------------------~~~~~~~- 91 (154)
T 3kcm_A 81 ------------------------------------FRKT--------------------------------GFTLPVL- 91 (154)
T ss_dssp ------------------------------------HHHH--------------------------------CCCCCEE-
T ss_pred ------------------------------------HHHc--------------------------------CCCeeEE-
Confidence 0000 0001111
Q ss_pred EecccccccccccccccCCeEEEe-cCCceeeecCCCC--CHHHHHHHHhCCCCCC
Q psy1110 273 VDVTREKSLGKRFDIKGFPTLKYF-RAGSVAFDAGHLR--DASRLVEFMRDPTEPP 325 (366)
Q Consensus 273 vd~~~~~~l~~~~~I~~~Ptl~~f-k~G~~~~~~~g~~--~~e~l~~fi~~~~~~~ 325 (366)
.+.+..+++.|+|.++|+++++ ++|+++.++.|.. +.+.+.++|++.....
T Consensus 92 --~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~l~~~~ 145 (154)
T 3kcm_A 92 --LDADKRVGKLYGTTGVPETFVIDRHGVILKKVVGAMEWDHPEVIAFLNNELSKA 145 (154)
T ss_dssp --ECTTCHHHHHHTCCSBCEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTC----
T ss_pred --ecCchHHHHHhCCCCCCeEEEECCCCcEEEEEcCCCccccHHHHHHHHHHHHHh
Confidence 2345678899999999966655 8999999988876 5679999999887654
No 151
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=99.28 E-value=1.1e-11 Score=108.61 Aligned_cols=52 Identities=15% Similarity=0.429 Sum_probs=44.0
Q ss_pred cCCeEEEEEECCCChhhhcccHHHHHHHHHHhcc-c------cEEEeeccC-Cccccccc
Q psy1110 115 EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQ-R------AYYGMGMLR-HRPQASNV 166 (366)
Q Consensus 115 ~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~-v------~~~~v~~~~-~~~~~~~~ 166 (366)
.+++++|.||++||++|+.+.|.+.+++++|.+. + .|+.|++++ +.+..+.+
T Consensus 58 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~~~~~v~~v~v~~d~~~~~~~~~~ 117 (183)
T 3lwa_A 58 ENQVVILNAWGQWCAPCRSESDDLQIIHEELQAAGNGDTPGGTVLGINVRDYSRDIAQDF 117 (183)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHCC---CCSEEEEEEECSCCCHHHHHHH
T ss_pred CCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhcCCCccCCcEEEEEECCCCCHHHHHHH
Confidence 5799999999999999999999999999999887 7 999999987 45444443
No 152
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=99.28 E-value=2.5e-12 Score=110.90 Aligned_cols=109 Identities=17% Similarity=0.218 Sum_probs=79.7
Q ss_pred ccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCCCcccccCCCCCCCCCCC
Q psy1110 114 QEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKNGEPTTHPSGTPQTSDTP 193 (366)
Q Consensus 114 ~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~G~~~~~~~g~~~~~~~~ 193 (366)
..+++++|.||++||++|+.+.|.+++++++ .+.++.|++++..+....+.
T Consensus 49 ~~gk~vll~F~a~~C~~C~~~~~~l~~l~~~---~v~vv~v~~~~~~~~~~~~~-------------------------- 99 (168)
T 2b1k_A 49 TQGKPVLLNVWATWCPTCRAEHQYLNQLSAQ---GIRVVGMNYKDDRQKAISWL-------------------------- 99 (168)
T ss_dssp CCSSCEEEEEECTTCHHHHHHHHHHHHHHHT---TCCEEEEEESCCHHHHHHHH--------------------------
T ss_pred cCCCEEEEEEECCCCHHHHHHHHHHHHHHHC---CCEEEEEECCCChHHHHHHH--------------------------
Confidence 4689999999999999999999999999876 68899999876543222220
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccCCCCCCCCccceeEEEE
Q psy1110 194 RTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSINSGSFSPRQITGILAAV 273 (366)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~~~~~~~~~~~v~~a~v 273 (366)
..+ + +.+..+
T Consensus 100 ------------------------------------~~~--------------------------------~--~~~~~~ 109 (168)
T 2b1k_A 100 ------------------------------------KEL--------------------------------G--NPYALS 109 (168)
T ss_dssp ------------------------------------HHH--------------------------------C--CCCSEE
T ss_pred ------------------------------------HHc--------------------------------C--CCCcee
Confidence 000 0 001111
Q ss_pred ecccccccccccccccCCe-EEEecCCceeeecCCCCCHHHHHHHHhCC
Q psy1110 274 DVTREKSLGKRFDIKGFPT-LKYFRAGSVAFDAGHLRDASRLVEFMRDP 321 (366)
Q Consensus 274 d~~~~~~l~~~~~I~~~Pt-l~~fk~G~~~~~~~g~~~~e~l~~fi~~~ 321 (366)
..+.+..++..|+|.++|+ +++.++|+++.++.|..+.+.+.++|++.
T Consensus 110 ~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~ 158 (168)
T 2b1k_A 110 LFDGDGMLGLDLGVYGAPETFLIDGNGIIRYRHAGDLNPRVWEEEIKPL 158 (168)
T ss_dssp EEETTCHHHHHHTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHTTHHH
T ss_pred eECcchHHHHHcCccccCEEEEECCCCeEEEEEeCCCCHHHHHHHHHHH
Confidence 1334567889999999995 55558999999999999999888887654
No 153
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=99.28 E-value=1.4e-11 Score=105.26 Aligned_cols=111 Identities=14% Similarity=0.292 Sum_probs=80.7
Q ss_pred cCCeEEEEEECCCChhhhcccHHHHHHHHHHhc-cccEEEeeccCCcccccccceeeeeecCCCcccccCCCCCCCCCCC
Q psy1110 115 EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQ-QRAYYGMGMLRHRPQASNVAVVSSLRNKNGEPTTHPSGTPQTSDTP 193 (366)
Q Consensus 115 ~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~-~v~~~~v~~~~~~~~~~~~~v~~~l~~~~G~~~~~~~g~~~~~~~~ 193 (366)
.+++++|.||++||++|+.+.|.+.++++++.+ .+.++.++++.. +.+... +.
T Consensus 40 ~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~~~~~~~v~v~~d~~--~~~~~~-------~~----------------- 93 (158)
T 3hdc_A 40 RGKIVLVNFWASWCPYCRDEMPSMDRLVKSFPKGDLVVLAVNVEKR--FPEKYR-------RA----------------- 93 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHSSTTSEEEEEEECSSS--CCGGGG-------GC-----------------
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHcccCCeEEEEEeCCHH--HHHHHH-------Hc-----------------
Confidence 578999999999999999999999999999984 488888887761 111110 00
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccCCCCCCCCccceeEEEE
Q psy1110 194 RTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSINSGSFSPRQITGILAAV 273 (366)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~~~~~~~~~~~v~~a~v 273 (366)
+.++.+.
T Consensus 94 -----------------------------------------------------------------------~~~~~~~-- 100 (158)
T 3hdc_A 94 -----------------------------------------------------------------------PVSFNFL-- 100 (158)
T ss_dssp -----------------------------------------------------------------------CCSCEEE--
T ss_pred -----------------------------------------------------------------------CCCceEE--
Confidence 0011111
Q ss_pred ecccccccccccccccCCeEEEe-cCCceeeecCCCCC--HHHHHHHHhCCCCCC
Q psy1110 274 DVTREKSLGKRFDIKGFPTLKYF-RAGSVAFDAGHLRD--ASRLVEFMRDPTEPP 325 (366)
Q Consensus 274 d~~~~~~l~~~~~I~~~Ptl~~f-k~G~~~~~~~g~~~--~e~l~~fi~~~~~~~ 325 (366)
.+.+..+++.|+|.++|+++++ ++|+++.++.|..+ ..++++.+.+...+.
T Consensus 101 -~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~G~~~~~~~~~~~~~~~~~~~~ 154 (158)
T 3hdc_A 101 -SDATGQVQQRYGANRLPDTFIVDRKGIIRQRVTGGIEWDAPKVVSYLKSLEGHH 154 (158)
T ss_dssp -ECTTSHHHHHTTCCSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHTTC---
T ss_pred -ECchHHHHHHhCCCCcceEEEEcCCCCEEEEEeCCCccchHHHHHHHHhhcccc
Confidence 2345678899999999997666 89999999988754 567999998887654
No 154
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=99.27 E-value=3.3e-12 Score=109.80 Aligned_cols=42 Identities=14% Similarity=0.419 Sum_probs=39.7
Q ss_pred cCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeecc
Q psy1110 115 EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGML 157 (366)
Q Consensus 115 ~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~ 157 (366)
.+++++|.||++||++|+.+.|.+.++++++. .+.|+.|+++
T Consensus 36 ~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~-~v~vv~i~~d 77 (165)
T 3ha9_A 36 GGDVVILWFMAAWCPSCVYMADLLDRLTEKYR-EISVIAIDFW 77 (165)
T ss_dssp CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT-TEEEEEEECC
T ss_pred CCCEEEEEEECCCCcchhhhHHHHHHHHHHcC-CcEEEEEEec
Confidence 57999999999999999999999999999998 8899999987
No 155
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=99.26 E-value=1.8e-11 Score=104.11 Aligned_cols=43 Identities=14% Similarity=0.286 Sum_probs=39.3
Q ss_pred cCCeEEEEEECCCChhhhc-ccHHHHHHHHHHhcc-ccEEEeecc
Q psy1110 115 EESSVLVMFYAPWCGHCKK-LKPEYEEAAATMKQQ-RAYYGMGML 157 (366)
Q Consensus 115 ~~k~vlV~F~a~wC~~Ck~-~~p~~e~la~~~~~~-v~~~~v~~~ 157 (366)
.+++++|.||++||++|+. +.|.+.+++++|.+. +.++.|+++
T Consensus 29 ~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~~~~v~~v~v~~~ 73 (160)
T 3lor_A 29 RGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMIDESQVQVIGLHSV 73 (160)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEEEECC
T ss_pred CCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhCcCCcEEEEEecc
Confidence 5799999999999999999 599999999999876 899999875
No 156
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=99.25 E-value=8.1e-12 Score=109.53 Aligned_cols=109 Identities=17% Similarity=0.281 Sum_probs=80.6
Q ss_pred cCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCCCcccccCCCCCCCCCCCc
Q psy1110 115 EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKNGEPTTHPSGTPQTSDTPR 194 (366)
Q Consensus 115 ~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~G~~~~~~~g~~~~~~~~~ 194 (366)
.+++++|.||++||++|+...|.+++++++ .+.++.|++++..+....+.
T Consensus 57 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~---~v~vv~vs~~d~~~~~~~~~--------------------------- 106 (176)
T 3kh7_A 57 KGKPALVNVWGTWCPSCRVEHPELTRLAEQ---GVVIYGINYKDDNAAAIKWL--------------------------- 106 (176)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT---TCEEEEEEESCCHHHHHHHH---------------------------
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHC---CCEEEEEeCCCCHHHHHHHH---------------------------
Confidence 479999999999999999999999999876 68899999876554333331
Q ss_pred cccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccCCCCCCCCccceeEEEEe
Q psy1110 195 TQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSINSGSFSPRQITGILAAVD 274 (366)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~~~~~~~~~~~v~~a~vd 274 (366)
..+ +...... -
T Consensus 107 -----------------------------------~~~--------------------------------~~~~~~~--~ 117 (176)
T 3kh7_A 107 -----------------------------------NEL--------------------------------HNPYLLS--I 117 (176)
T ss_dssp -----------------------------------HHT--------------------------------TCCCSEE--E
T ss_pred -----------------------------------HHc--------------------------------CCCCceE--E
Confidence 000 0001111 2
Q ss_pred cccccccccccccccCCeEEEe-cCCceeeecCCCCCHHHHHHHHhCCC
Q psy1110 275 VTREKSLGKRFDIKGFPTLKYF-RAGSVAFDAGHLRDASRLVEFMRDPT 322 (366)
Q Consensus 275 ~~~~~~l~~~~~I~~~Ptl~~f-k~G~~~~~~~g~~~~e~l~~fi~~~~ 322 (366)
.+.+..++..|+|.++|+++++ ++|+++.++.|..+.+.+.++|.+.+
T Consensus 118 ~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l 166 (176)
T 3kh7_A 118 SDADGTLGLDLGVYGAPETYLIDKQGIIRHKIVGVVDQKVWREQLAPLY 166 (176)
T ss_dssp EETTCHHHHHHTCCSSCEEEEECTTCBEEEEEESCCCHHHHHHHTHHHH
T ss_pred ECCcchHHHHcCCCCCCeEEEECCCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 2345688899999999976666 89999999999999988888876544
No 157
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=99.24 E-value=1.5e-11 Score=104.05 Aligned_cols=64 Identities=20% Similarity=0.400 Sum_probs=49.5
Q ss_pred CcCCCCCceEEecchhhhhhhccCCeEEEEEECCCChh--hhcccHHHHHHHHHH-hcc-ccEEEeeccCCcc
Q psy1110 93 DWADTESEVVHLTDDNFDLVIQEESSVLVMFYAPWCGH--CKKLKPEYEEAAATM-KQQ-RAYYGMGMLRHRP 161 (366)
Q Consensus 93 ~~~~~~~~v~~l~~~~~~~~i~~~k~vlV~F~a~wC~~--Ck~~~p~~e~la~~~-~~~-v~~~~v~~~~~~~ 161 (366)
.+.+..+....|+..++ .+++++|.||++||++ |+...|.+.+++++| .+. +.++.|++++..+
T Consensus 15 ~l~~~~g~~~~l~~~~~-----~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~~~~~~~~~v~v~~d~~~~ 82 (150)
T 3fw2_A 15 SLPNAKGEKITRSSDAF-----KQKSLLINFWASWNDSISQKQSNSELREIYKKYKKNKYIGMLGISLDVDKQ 82 (150)
T ss_dssp CEEBTTCCEECTTSTTT-----TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHHTTCSSEEEEEEECCSCHH
T ss_pred EeECCCCCEEecchhhh-----CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHhccCCCeEEEEEEcCCCHH
Confidence 33444555555542222 5799999999999999 999999999999999 665 8999999887643
No 158
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=99.23 E-value=6.9e-12 Score=105.35 Aligned_cols=47 Identities=11% Similarity=0.152 Sum_probs=41.9
Q ss_pred cCCeEEEEEECCCChhhhcccHHHHHHHHHHhcc-ccEEEeeccCCcc
Q psy1110 115 EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQ-RAYYGMGMLRHRP 161 (366)
Q Consensus 115 ~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~-v~~~~v~~~~~~~ 161 (366)
.+++++|.|||+||++|+...|.+.+++++|.+. +.++.|+++...+
T Consensus 31 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~~~~ 78 (143)
T 4fo5_A 31 LGRYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCSISMDEKES 78 (143)
T ss_dssp SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEEEECCSCHH
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEEEEccCCHH
Confidence 5799999999999999999999999999999865 8999999886543
No 159
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=99.20 E-value=4.1e-11 Score=105.38 Aligned_cols=44 Identities=20% Similarity=0.252 Sum_probs=40.0
Q ss_pred cCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccC
Q psy1110 115 EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLR 158 (366)
Q Consensus 115 ~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~ 158 (366)
.+++++|.||++||++|+...|.+++++++|.+.+.++.|+++.
T Consensus 32 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~v~v~~d~ 75 (188)
T 2cvb_A 32 HEPLLAVVFMCNHCPYVKGSIGELVALAERYRGKVAFVGINAND 75 (188)
T ss_dssp CSSEEEEEEECSSCHHHHTTHHHHHHHHHHTTTTEEEEEEECCC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhhcCeEEEEEEcCc
Confidence 47999999999999999999999999999998778888888864
No 160
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=99.20 E-value=4.8e-11 Score=104.61 Aligned_cols=45 Identities=20% Similarity=0.474 Sum_probs=40.7
Q ss_pred cCCeEEEEEECCCChhhhcccHHHHHHHHHHhc-cccEEEeeccCC
Q psy1110 115 EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQ-QRAYYGMGMLRH 159 (366)
Q Consensus 115 ~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~-~v~~~~v~~~~~ 159 (366)
.+++++|.||++||++|+...|.+.+++++|.+ .+.++.|+++..
T Consensus 59 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~~ 104 (186)
T 1jfu_A 59 RGKTLLVNLWATWCVPCRKEMPALDELQGKLSGPNFEVVAINIDTR 104 (186)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHCBTTEEEEEEECCCS
T ss_pred CCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhccCCcEEEEEECCCC
Confidence 579999999999999999999999999999984 588999998754
No 161
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=99.19 E-value=7.7e-11 Score=99.22 Aligned_cols=47 Identities=15% Similarity=0.219 Sum_probs=41.8
Q ss_pred cCCeEEEEEECCCChhhhcccHHHHHHHHHHhc--cccEEEeeccCCcc
Q psy1110 115 EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQ--QRAYYGMGMLRHRP 161 (366)
Q Consensus 115 ~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~--~v~~~~v~~~~~~~ 161 (366)
.+++++|+||++||++|+.+.|.+.++++++.+ .+.++.|++++...
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~~~vv~v~~d~~~~ 75 (146)
T 1o8x_A 27 AGKLVFFYFSASWCPPARGFTPQLIEFYDKFHESKNFEVVFCTWDEEED 75 (146)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHH
T ss_pred CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhhhcCCeEEEEEeCCCCHH
Confidence 578999999999999999999999999999983 58899999886543
No 162
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=99.17 E-value=4e-11 Score=105.83 Aligned_cols=44 Identities=14% Similarity=0.286 Sum_probs=39.3
Q ss_pred cCC-eEEEEEECCCChhhhcccHHHHHHHHHHhcc-ccEEEeeccC
Q psy1110 115 EES-SVLVMFYAPWCGHCKKLKPEYEEAAATMKQQ-RAYYGMGMLR 158 (366)
Q Consensus 115 ~~k-~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~-v~~~~v~~~~ 158 (366)
.++ +++|.||++||++|+...|.+.+++++|.+. +.++.|+++.
T Consensus 44 ~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~v~~d~ 89 (196)
T 2ywi_A 44 KSDAATVIMFICNHCPFVKHVQHELVRLANDYMPKGVSFVAINSND 89 (196)
T ss_dssp CCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGGGTCEEEEEECSC
T ss_pred CCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCc
Confidence 355 5999999999999999999999999999875 8999999864
No 163
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=99.16 E-value=1.4e-10 Score=100.60 Aligned_cols=47 Identities=17% Similarity=0.328 Sum_probs=42.2
Q ss_pred cCCeEEEEEECCCChhhhcccHHHHHHHHHHhc--cccEEEeeccCCcc
Q psy1110 115 EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQ--QRAYYGMGMLRHRP 161 (366)
Q Consensus 115 ~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~--~v~~~~v~~~~~~~ 161 (366)
.+++++|+|||+||++|+.+.|.+.+++++|.+ .+.++.|++++...
T Consensus 47 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~~~~v~vv~v~~d~~~~ 95 (165)
T 3s9f_A 47 SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHDSKNFEIILASWDEEED 95 (165)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCCSHH
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHhccCCCeEEEEEecCCCHH
Confidence 579999999999999999999999999999986 58899999887644
No 164
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=99.15 E-value=6.2e-11 Score=99.46 Aligned_cols=47 Identities=13% Similarity=0.252 Sum_probs=42.0
Q ss_pred cCCeEEEEEECCCChhhhcccHHHHHHHHHHhc--cccEEEeeccCCcc
Q psy1110 115 EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQ--QRAYYGMGMLRHRP 161 (366)
Q Consensus 115 ~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~--~v~~~~v~~~~~~~ 161 (366)
.+++++|+||++||++|+.+.|.+.++++++.+ .+.++.|++++..+
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~v~~d~~~~ 75 (144)
T 1i5g_A 27 AGKTVFFYFSASWCPPSRAFTPQLIDFYKAHAEKKNFEVMLISWDESAE 75 (144)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHH
Confidence 578999999999999999999999999999984 68899999886544
No 165
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=98.76 E-value=3.8e-12 Score=108.75 Aligned_cols=52 Identities=25% Similarity=0.385 Sum_probs=42.9
Q ss_pred cCCeEEEEEECCCChhhhcccHHHHH-HHHHHh--ccccEEEeeccCCccccccc
Q psy1110 115 EESSVLVMFYAPWCGHCKKLKPEYEE-AAATMK--QQRAYYGMGMLRHRPQASNV 166 (366)
Q Consensus 115 ~~k~vlV~F~a~wC~~Ck~~~p~~e~-la~~~~--~~v~~~~v~~~~~~~~~~~~ 166 (366)
.+++++|.||++||++|+.+.|.+.+ +++.+. ..+.++.|++++..+....+
T Consensus 32 ~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~ 86 (159)
T 2ls5_A 32 RGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKVLAF 86 (159)
Confidence 57899999999999999999999998 988886 34888889888765444433
No 166
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=99.14 E-value=9.3e-11 Score=100.07 Aligned_cols=45 Identities=9% Similarity=0.105 Sum_probs=40.4
Q ss_pred cCCeEEEEEECCCChh-hhcccHHHHHHHHHHhc-----cccEEEeeccCC
Q psy1110 115 EESSVLVMFYAPWCGH-CKKLKPEYEEAAATMKQ-----QRAYYGMGMLRH 159 (366)
Q Consensus 115 ~~k~vlV~F~a~wC~~-Ck~~~p~~e~la~~~~~-----~v~~~~v~~~~~ 159 (366)
.+++++|.||++||++ |....|.+.++++++.+ .+.++.|+++..
T Consensus 22 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~~~vv~vs~d~~ 72 (164)
T 2ggt_A 22 LGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDSITTLPDLTPLFISIDPE 72 (164)
T ss_dssp TTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHHSSSSCCEEEEEEESCTT
T ss_pred CCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhhccCCCcEEEEEEEeCCC
Confidence 4799999999999998 99999999999999975 688899988754
No 167
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=99.13 E-value=1e-10 Score=97.82 Aligned_cols=47 Identities=17% Similarity=0.348 Sum_probs=41.6
Q ss_pred cCCeEEEEEECCCChhhhcccHHHHHHHHHHh--ccccEEEeeccCCcc
Q psy1110 115 EESSVLVMFYAPWCGHCKKLKPEYEEAAATMK--QQRAYYGMGMLRHRP 161 (366)
Q Consensus 115 ~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~--~~v~~~~v~~~~~~~ 161 (366)
.+++++|.||++||++|+.+.|.+.++++++. ..+.++.++++...+
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~~vv~i~~d~~~~ 75 (144)
T 1o73_A 27 VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHHVAKNFEVVLISWDENES 75 (144)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTEEEEEEECCSSHH
T ss_pred CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCHH
Confidence 57899999999999999999999999999998 458899999886543
No 168
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=99.13 E-value=4.9e-11 Score=104.86 Aligned_cols=44 Identities=14% Similarity=0.118 Sum_probs=40.8
Q ss_pred cCCeEEEEEECCCChhhhcccHHHHHHHHHHhcc-ccEEEeeccC
Q psy1110 115 EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQ-RAYYGMGMLR 158 (366)
Q Consensus 115 ~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~-v~~~~v~~~~ 158 (366)
.+++++|.||++||++|+...|.+++++++|.+. +.++.|+++.
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~v~vv~vs~d~ 92 (181)
T 2p31_A 48 RGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQ 92 (181)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCC
T ss_pred CCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhcCCEEEEEEECcC
Confidence 5799999999999999999999999999999876 8999999874
No 169
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=99.13 E-value=9.7e-11 Score=103.57 Aligned_cols=44 Identities=18% Similarity=0.086 Sum_probs=40.9
Q ss_pred cCCeEEEEEECCCChhhhcccHHHHHHHHHHhcc-ccEEEeeccC
Q psy1110 115 EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQ-RAYYGMGMLR 158 (366)
Q Consensus 115 ~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~-v~~~~v~~~~ 158 (366)
.+++++|.||++||++|+...|.+.+++++|+++ +.++.|+++.
T Consensus 45 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~ 89 (187)
T 3dwv_A 45 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPSNQ 89 (187)
T ss_dssp TTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGGGTCEEEEEEBCC
T ss_pred CCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhhCCeEEEEEECcc
Confidence 5799999999999999999999999999999886 9999999873
No 170
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=98.71 E-value=6.6e-12 Score=104.69 Aligned_cols=47 Identities=15% Similarity=0.305 Sum_probs=39.6
Q ss_pred cCC-eEEEEEECCCChhhhcccHHHHHHHHHHh---ccccEEEeeccCCcc
Q psy1110 115 EES-SVLVMFYAPWCGHCKKLKPEYEEAAATMK---QQRAYYGMGMLRHRP 161 (366)
Q Consensus 115 ~~k-~vlV~F~a~wC~~Ck~~~p~~e~la~~~~---~~v~~~~v~~~~~~~ 161 (366)
.++ +++|.||++||++|+.+.|.+.+++++++ ..+.++.+++++..+
T Consensus 24 ~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~ 74 (143)
T 2lus_A 24 KDKDIIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSED 74 (143)
Confidence 356 99999999999999999999999999984 357888888876543
No 171
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=99.10 E-value=8.6e-11 Score=101.12 Aligned_cols=44 Identities=11% Similarity=0.095 Sum_probs=39.7
Q ss_pred cCCeEEEEEECCCChh-hhcccHHHHHHHHHHhc-----cccEEEeeccC
Q psy1110 115 EESSVLVMFYAPWCGH-CKKLKPEYEEAAATMKQ-----QRAYYGMGMLR 158 (366)
Q Consensus 115 ~~k~vlV~F~a~wC~~-Ck~~~p~~e~la~~~~~-----~v~~~~v~~~~ 158 (366)
.+++++|.||++||++ |+...|.+.+++++|.. .+.++.|+++.
T Consensus 25 ~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~v~vv~is~d~ 74 (171)
T 2rli_A 25 RGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEAEPGLPPVQPVFITVDP 74 (171)
T ss_dssp TTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHHSTTSCCEEEEEEESCS
T ss_pred CCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEEECC
Confidence 4799999999999998 99999999999999963 68899999874
No 172
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=99.10 E-value=2.3e-10 Score=99.29 Aligned_cols=42 Identities=21% Similarity=0.215 Sum_probs=39.1
Q ss_pred cCCeEEEEEECCCChhhhcccHHHHHHHHHHhcc-ccEEEeecc
Q psy1110 115 EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQ-RAYYGMGML 157 (366)
Q Consensus 115 ~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~-v~~~~v~~~ 157 (366)
.+++++|.|||+||++|+ ..|.+.+++++|.+. +.++.|+++
T Consensus 31 ~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~~~v~vv~vs~d 73 (171)
T 3cmi_A 31 KGKVVLIVNVASKCGFTP-QYKELEALYKRYKDEGFTIIGFPCN 73 (171)
T ss_dssp TTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred CCCEEEEEEEecCCCcch-hHHHHHHHHHHhccCCeEEEEEECc
Confidence 579999999999999999 999999999999876 999999986
No 173
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=99.09 E-value=8.8e-11 Score=95.87 Aligned_cols=48 Identities=10% Similarity=0.191 Sum_probs=39.5
Q ss_pred eeEEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHH
Q psy1110 268 GILAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFM 318 (366)
Q Consensus 268 v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi 318 (366)
+.+.++|.+++.++..+|+++ +|++++|.+|+.+ ..|..+.+.|.+||
T Consensus 59 i~~~~vDId~d~~l~~~ygv~-VP~l~~~~dG~~v--~~g~~~~~~L~~~L 106 (107)
T 2fgx_A 59 FELEVINIDGNEHLTRLYNDR-VPVLFAVNEDKEL--CHYFLDSDVIGAYL 106 (107)
T ss_dssp CCCEEEETTTCHHHHHHSTTS-CSEEEETTTTEEE--ECSSCCCHHHHHHH
T ss_pred CeEEEEECCCCHHHHHHhCCC-CceEEEEECCEEE--EecCCCHHHHHHHh
Confidence 345677888888888899997 9999999999966 34778889998887
No 174
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=99.08 E-value=7.3e-11 Score=115.55 Aligned_cols=115 Identities=14% Similarity=0.094 Sum_probs=82.3
Q ss_pred cCCeEEEEEECCCChhhhcccHHHHHHHHHHhcc-ccEEEeeccCCcccccccceeeeeecCCCcccccCCCCCCCCCCC
Q psy1110 115 EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQ-RAYYGMGMLRHRPQASNVAVVSSLRNKNGEPTTHPSGTPQTSDTP 193 (366)
Q Consensus 115 ~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~-v~~~~v~~~~~~~~~~~~~v~~~l~~~~G~~~~~~~g~~~~~~~~ 193 (366)
.+++++|+||++||++|+.+.|.+.+++++|.+. +.++.|++++...-....
T Consensus 81 ~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~~~v~vi~Vs~d~~~~~d~~~--------------------------- 133 (352)
T 2hyx_A 81 RGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKDSGLAVIGVHTPEYAFEKVPG--------------------------- 133 (352)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGGGTEEEEEEECCSSGGGGCHH---------------------------
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhhcCCeEEEEEECCcccccCCHH---------------------------
Confidence 4799999999999999999999999999999874 899999986421100000
Q ss_pred ccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccCCCCCCCCccceeEEEE
Q psy1110 194 RTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSINSGSFSPRQITGILAAV 273 (366)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~~~~~~~~~~~v~~a~v 273 (366)
. ..-+...+ +.++. +
T Consensus 134 -----------------------------~-~~~~~~~~--------------------------------~l~fp---v 148 (352)
T 2hyx_A 134 -----------------------------N-VAKGAANL--------------------------------GISYP---I 148 (352)
T ss_dssp -----------------------------H-HHHHHHHH--------------------------------TCCSC---E
T ss_pred -----------------------------H-HHHHHHHc--------------------------------CCCcc---E
Confidence 0 00000000 00011 1
Q ss_pred ecccccccccccccccCCeEEEe-cCCceeeecCCCCCHHHHHHHHhCC
Q psy1110 274 DVTREKSLGKRFDIKGFPTLKYF-RAGSVAFDAGHLRDASRLVEFMRDP 321 (366)
Q Consensus 274 d~~~~~~l~~~~~I~~~Ptl~~f-k~G~~~~~~~g~~~~e~l~~fi~~~ 321 (366)
..+.+..+++.|+|.++|+++++ ++|+++.++.|..+.+.|.++|++.
T Consensus 149 ~~D~~~~l~~~ygV~~~Pt~~lID~~G~Iv~~~~G~~~~~~l~~~I~~l 197 (352)
T 2hyx_A 149 ALDNNYATWTNYRNRYWPAEYLIDATGTVRHIKFGEGDYNVTETLVRQL 197 (352)
T ss_dssp EECTTSHHHHHTTCCEESEEEEECTTSBEEEEEESBCCHHHHHHHHHHH
T ss_pred EeCCcHHHHHHcCCCccCEEEEEeCCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 22445678899999999998888 8999999999999988888887654
No 175
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=99.08 E-value=7.9e-11 Score=101.31 Aligned_cols=45 Identities=13% Similarity=0.183 Sum_probs=40.5
Q ss_pred cCCeEEEEEECCCChh-hhcccHHHHHHHHHHhc----cccEEEeeccCC
Q psy1110 115 EESSVLVMFYAPWCGH-CKKLKPEYEEAAATMKQ----QRAYYGMGMLRH 159 (366)
Q Consensus 115 ~~k~vlV~F~a~wC~~-Ck~~~p~~e~la~~~~~----~v~~~~v~~~~~ 159 (366)
.+++++|.||++||++ |+...|.+.+++++|.+ .+.++.|+++..
T Consensus 34 ~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~~~~~~~v~vv~is~d~~ 83 (172)
T 2k6v_A 34 QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLPPKAQERVQVIFVSVDPE 83 (172)
T ss_dssp TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSCHHHHTTEEEEEEESCTT
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhhhhccCCEEEEEEEECCC
Confidence 5799999999999997 99999999999999874 589999998754
No 176
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.08 E-value=2.4e-10 Score=117.07 Aligned_cols=134 Identities=9% Similarity=0.025 Sum_probs=102.2
Q ss_pred ceEEeeecCe-eeEeecCCccHHHHHHHHhCcCCcchhhhccCCCcCCCCCceEEecchhhhhhhcc-CCeEEEEEECCC
Q psy1110 50 KKVRRQKNAE-VKYVYENGNTKDKIIEFVRNPQATSEEVKKKEQDWADTESEVVHLTDDNFDLVIQE-ESSVLVMFYAPW 127 (366)
Q Consensus 50 Pti~~f~~g~-~~~~y~g~r~~~~i~~fi~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i~~-~k~vlV~F~a~w 127 (366)
|++.+.++|. .-..|.|-..-.++.+|+.....-+ +.-..++++.++.+.+. +...++.||++|
T Consensus 63 p~~~~~~~~~~~~i~f~g~p~g~e~~s~~~~l~~~~--------------~~~~~~~~~~~~~i~~~~~~~~i~~f~a~~ 128 (521)
T 1hyu_A 63 PSFLITNPGSQQGPRFAGSPLGHEFTSLVLALLWTG--------------GHPSKEAQSLLEQIRDIDGDFEFETYYSLS 128 (521)
T ss_dssp SEEEEECTTCCCSCEEESCCCGGGHHHHHHHHHHHT--------------TCCCCSCHHHHHHHHHCCSCEEEEEEECTT
T ss_pred CEEEEecCCCcceEEEeccCcchhHHHHHHHHHhhc--------------CCCCCCCHHHHHHHHhcCCCcceEEEECCC
Confidence 9999987764 3477877554555555554432221 11235677777766533 566789999999
Q ss_pred ChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCCCcccccCCCCCCCCCCCccccCCCCCCCCCC
Q psy1110 128 CGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKNGEPTTHPSGTPQTSDTPRTQCCHPAAHSPAS 207 (366)
Q Consensus 128 C~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 207 (366)
|++|+.+.|.+++++..+. +
T Consensus 129 C~~C~~~~~~l~~~a~~~~-~----------------------------------------------------------- 148 (521)
T 1hyu_A 129 CHNCPDVVQALNLMAVLNP-R----------------------------------------------------------- 148 (521)
T ss_dssp CSSHHHHHHHHHHHHHHCT-T-----------------------------------------------------------
T ss_pred CcCcHHHHHHHHHHHhHcC-c-----------------------------------------------------------
Confidence 9999999999999988764 4
Q ss_pred CCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccCCCCCCCCccceeEEEEeccccccccccccc
Q psy1110 208 PIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSINSGSFSPRQITGILAAVDVTREKSLGKRFDI 287 (366)
Q Consensus 208 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I 287 (366)
+.+.++|.+.+.++..+|+|
T Consensus 149 ------------------------------------------------------------v~~~~vd~~~~~~~~~~~~i 168 (521)
T 1hyu_A 149 ------------------------------------------------------------IKHTAIDGGTFQNEITERNV 168 (521)
T ss_dssp ------------------------------------------------------------EEEEEEETTTCHHHHHHTTC
T ss_pred ------------------------------------------------------------eEEEEEechhhHHHHHHhCC
Confidence 77888999999999999999
Q ss_pred ccCCeEEEecCCceeeecCCCCCHHHHHHHHhCC
Q psy1110 288 KGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDP 321 (366)
Q Consensus 288 ~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~ 321 (366)
.++||+++ +|+.+.. |..+.+.|.+|+...
T Consensus 169 ~svPt~~i--~g~~~~~--G~~~~~~l~~~l~~~ 198 (521)
T 1hyu_A 169 MGVPAVFV--NGKEFGQ--GRMTLTEIVAKVDTG 198 (521)
T ss_dssp CSSSEEEE--TTEEEEE--SCCCHHHHHHHHCCS
T ss_pred CccCEEEE--CCEEEec--CCCCHHHHHHHHhhc
Confidence 99999987 8987654 889999999999775
No 177
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=99.06 E-value=3.9e-10 Score=102.38 Aligned_cols=44 Identities=18% Similarity=0.238 Sum_probs=39.6
Q ss_pred cCC-eEEEEEECCCChhhhcccHHHHHHHHHHhcc-ccEEEeeccC
Q psy1110 115 EES-SVLVMFYAPWCGHCKKLKPEYEEAAATMKQQ-RAYYGMGMLR 158 (366)
Q Consensus 115 ~~k-~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~-v~~~~v~~~~ 158 (366)
.++ +++|.||++||++|+...|.+++++++|.+. +.|+.|+++.
T Consensus 57 ~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~ 102 (218)
T 3u5r_E 57 KDSPALLVAFISNRCPFVVLIREALAKFAGDYAGQGLAVVAINSND 102 (218)
T ss_dssp TTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTTTTEEEEEEECSC
T ss_pred CCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHhCCcEEEEEECCc
Confidence 356 5999999999999999999999999999876 9999999863
No 178
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=99.06 E-value=9.7e-11 Score=91.96 Aligned_cols=49 Identities=18% Similarity=0.291 Sum_probs=40.8
Q ss_pred EEEEecccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCCC
Q psy1110 270 LAAVDVTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPTE 323 (366)
Q Consensus 270 ~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~~ 323 (366)
+.++|.+++.++..+|+++ +||+++ .+|+.+. |..+.+.|.+||.+...
T Consensus 29 ~~~vdid~~~~l~~~~g~~-vPtl~~-~~G~~v~---g~~~~~~L~~~l~~~~~ 77 (87)
T 1ttz_A 29 FFSVFIDDDAALESAYGLR-VPVLRD-PMGRELD---WPFDAPRLRAWLDAAPH 77 (87)
T ss_dssp EEEEECTTCHHHHHHHTTT-CSEEEC-TTCCEEE---SCCCHHHHHHHHHTCC-
T ss_pred eEEEECCCCHHHHHHhCCC-cCeEEE-ECCEEEe---CCCCHHHHHHHHHHHHH
Confidence 4567888888899999998 999998 8999764 77899999999987654
No 179
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=99.04 E-value=3.1e-10 Score=100.45 Aligned_cols=44 Identities=18% Similarity=0.089 Sum_probs=40.9
Q ss_pred cCCeEEEEEECCCChhhhcccHHHHHHHHHHhcc-ccEEEeeccC
Q psy1110 115 EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQ-RAYYGMGMLR 158 (366)
Q Consensus 115 ~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~-v~~~~v~~~~ 158 (366)
.+++++|.||++||++|+...|.+.+++++|.+. +.++.|++++
T Consensus 47 ~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~ 91 (190)
T 2vup_A 47 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKSQGFTVLAFPCNQ 91 (190)
T ss_dssp TTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTCEEEEEECCC
T ss_pred CCCEEEEEEecCCCCccHHHHHHHHHHHHHHhcCCeEEEEEEcCc
Confidence 5789999999999999999999999999999876 9999999874
No 180
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=99.04 E-value=6.3e-10 Score=95.33 Aligned_cols=44 Identities=14% Similarity=0.118 Sum_probs=40.7
Q ss_pred cCCeEEEEEECCCChhhhcccHHHHHHHHHHhcc-ccEEEeeccC
Q psy1110 115 EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQ-RAYYGMGMLR 158 (366)
Q Consensus 115 ~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~-v~~~~v~~~~ 158 (366)
.+++++|.||++||++|+...|.+.+++++|.+. +.++.|+++.
T Consensus 30 ~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~v~~d~ 74 (169)
T 2v1m_A 30 RGHVCLIVNVACKCGATDKNYRQLQEMHTRLVGKGLRILAFPCNQ 74 (169)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCC
T ss_pred CCCEEEEEEeeccCCchHHHHHHHHHHHHHhhcCCeEEEEEECCc
Confidence 5799999999999999999999999999999876 9999999874
No 181
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=99.04 E-value=2.8e-10 Score=97.65 Aligned_cols=44 Identities=16% Similarity=0.169 Sum_probs=40.8
Q ss_pred cCCeEEEEEECCCChhhhcccHHHHHHHHHHhcc-ccEEEeeccC
Q psy1110 115 EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQ-RAYYGMGMLR 158 (366)
Q Consensus 115 ~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~-v~~~~v~~~~ 158 (366)
.+++++|.||++||++|+...|.+.+++++|.+. +.++.|+++.
T Consensus 31 ~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~~~~~vv~vs~d~ 75 (170)
T 2p5q_A 31 KGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKDQGLEILAFPCNQ 75 (170)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCT
T ss_pred CCCEEEEEEEeccCCccHHHHHHHHHHHHHhccCCEEEEEEECCC
Confidence 5799999999999999999999999999999876 9999999874
No 182
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=99.04 E-value=5.5e-10 Score=102.01 Aligned_cols=126 Identities=12% Similarity=0.115 Sum_probs=100.5
Q ss_pred CCceEEe-cchhhhhhhccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCC
Q psy1110 98 ESEVVHL-TDDNFDLVIQEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKN 176 (366)
Q Consensus 98 ~~~v~~l-~~~~~~~~i~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~ 176 (366)
.+..+.| +.++++++++++..++|-||++|| ..+.+.|+++|+.+. .
T Consensus 8 ~~~~~~l~s~~~~~~~l~~~~v~vVgff~~~~---~~~~~~f~~~A~~l~-~---------------------------- 55 (227)
T 4f9z_D 8 AQEPTWLTDVPAAMEFIAATEVAVIGFFQDLE---IPAVPILHSMVQKFP-G---------------------------- 55 (227)
T ss_dssp -CCCEECCSHHHHHHHHHTSSEEEEEECSCSC---STHHHHHHHHTTTCT-T----------------------------
T ss_pred cCCCeeeCCHHHHHHHHhcCCeEEEEEecCCC---chhHHHHHHHHHhCC-C----------------------------
Confidence 3456666 558999999999999999999985 568999999998773 4
Q ss_pred CcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeecccccccccc
Q psy1110 177 GEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSI 256 (366)
Q Consensus 177 G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~ 256 (366)
T Consensus 56 -------------------------------------------------------------------------------- 55 (227)
T 4f9z_D 56 -------------------------------------------------------------------------------- 55 (227)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCccceeEEEEecccccccccccccccCCeEEEecCCc-eeeecC----CCCCHHHHHHHHhCCCCCCCCCCCC
Q psy1110 257 NSGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAGS-VAFDAG----HLRDASRLVEFMRDPTEPPPPPPPE 331 (366)
Q Consensus 257 ~~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G~-~~~~~~----g~~~~e~l~~fi~~~~~~~~~~~~~ 331 (366)
+.|+. +.+.++++++++++ |++++|+++. ....|. |.++.++|.+||.++..|.
T Consensus 56 -----------~~F~~---t~~~~v~~~~~v~~-p~i~lfk~~~~~~~~~~~~~~g~~~~~~l~~fi~~~~~pl------ 114 (227)
T 4f9z_D 56 -----------VSFGI---STDSEVLTHYNITG-NTICLFRLVDNEQLNLEDEDIESIDATKLSRFIEINSLHM------ 114 (227)
T ss_dssp -----------SEEEE---ECCHHHHHHTTCCS-SEEEEEETTTTEEEEECHHHHHTCCHHHHHHHHHHHCCCS------
T ss_pred -----------ceEEE---ECCHHHHHHcCCCC-CeEEEEEecCcccccccccccCCCCHHHHHHHHHHhCCCc------
Confidence 44554 34567889999998 9999998753 345666 4789999999999999988
Q ss_pred CCCCCCCCeeEEechhcHHHHhhccCceEEE-Eec
Q psy1110 332 PAWAEEPSEVYHLGADNFASTLRKKKHALVM-FYA 365 (366)
Q Consensus 332 ~~~~~~~~~v~~lt~~~~~~~~~~~~~~~v~-fy~ 365 (366)
|.++|.+|+..++....+.+++ |+.
T Consensus 115 ---------v~e~t~~n~~~~~~~~~~~~~l~f~~ 140 (227)
T 4f9z_D 115 ---------VTEYNPVTVIGLFNSVIQIHLLLIMN 140 (227)
T ss_dssp ---------EEECCHHHHHHHHHSSCCEEEEEEEC
T ss_pred ---------eeecCcccHHHHhccCCceEEEEEEc
Confidence 9999999999999877666554 543
No 183
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=99.03 E-value=3e-09 Score=97.73 Aligned_cols=107 Identities=13% Similarity=0.162 Sum_probs=72.8
Q ss_pred chHHHhhcC-CCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCee-----eEeecCCccHHHHHHHHhCcCCcchh
Q psy1110 15 SPLAKEIVK-PKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEV-----KYVYENGNTKDKIIEFVRNPQATSEE 86 (366)
Q Consensus 15 ~~la~e~~~-~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~-----~~~y~g~r~~~~i~~fi~~~~~~~~~ 86 (366)
..+|+++.. ...+.|++|||..+...++|.+++|+ ||+.+|++|.. ...+.| ++.+.|.+|+.+.......
T Consensus 53 ~~l~~~~~~~~~~v~~~~vd~~~~~~~~l~~~~~v~~~Pt~~~~~~g~~~~~g~~~~~~g-~~~~~l~~~i~~~l~~~~~ 131 (244)
T 3q6o_A 53 XALAEDVKAWRPALYLAALDCAEETNSAVCRDFNIPGFPTVRFFXAFTXNGSGAVFPVAG-ADVQTLRERLIDALESHHD 131 (244)
T ss_dssp HHHHHHTGGGTTTEEEEEEETTSTTTHHHHHHTTCCSSSEEEEECTTCCSSSCEECCCTT-CCHHHHHHHHHHHHHTCTT
T ss_pred HHHHHHHHhccCcEEEEEEeCCchhhHHHHHHcCCCccCEEEEEeCCCcCCCCeeEecCC-CCHHHHHHHHHHHHHhccc
Confidence 356666662 23799999999665567999999999 99999997532 235555 7999999999876654221
Q ss_pred hhccCCCcCCCCCceEEecchhhhhhh--ccCCeEEEEEECCCC
Q psy1110 87 VKKKEQDWADTESEVVHLTDDNFDLVI--QEESSVLVMFYAPWC 128 (366)
Q Consensus 87 ~~~~~~~~~~~~~~v~~l~~~~~~~~i--~~~k~vlV~F~a~wC 128 (366)
.++.....+..++..+++.++ ++.+++.+.|....|
T Consensus 132 ------~~p~~~p~l~~~~~~~l~~~~~~~~~~~~al~f~~~~~ 169 (244)
T 3q6o_A 132 ------TWPPACPPLEPAXLEEIDGFFARNNEEYLALIFEXGGS 169 (244)
T ss_dssp ------SCCTTSCCCSCCCHHHHHTHHHHCCCSEEEEEEECTTC
T ss_pred ------cCCCCCCCcccccHHHHHHHhhcCCCceEEEEEEECCc
Confidence 222222234445677888877 345677777776543
No 184
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=99.02 E-value=2.3e-10 Score=98.34 Aligned_cols=44 Identities=9% Similarity=0.117 Sum_probs=39.4
Q ss_pred cCCe-EEEEEE-CCCChhhhcccHHHHHHHHHHhcc-ccEEEeeccC
Q psy1110 115 EESS-VLVMFY-APWCGHCKKLKPEYEEAAATMKQQ-RAYYGMGMLR 158 (366)
Q Consensus 115 ~~k~-vlV~F~-a~wC~~Ck~~~p~~e~la~~~~~~-v~~~~v~~~~ 158 (366)
.++. ++|.|| ++||++|....|.+.+++++|.+. +.++.|+++.
T Consensus 27 ~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~ 73 (161)
T 3drn_A 27 IGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIGVSSDD 73 (161)
T ss_dssp TTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEEEESCC
T ss_pred cCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 4565 999999 999999999999999999999876 8999998864
No 185
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=99.01 E-value=3.8e-10 Score=99.05 Aligned_cols=44 Identities=11% Similarity=0.048 Sum_probs=40.6
Q ss_pred cCCeEEEEEECCCChhhhcccHHHHHHHHHHhcc-ccEEEeeccC
Q psy1110 115 EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQ-RAYYGMGMLR 158 (366)
Q Consensus 115 ~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~-v~~~~v~~~~ 158 (366)
.+++++|.||++||++|+...|.+.+++++|.+. +.++.|+++.
T Consensus 46 ~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~vs~d~ 90 (183)
T 2obi_A 46 RGFVCIVTNVASQCGKTEVNYTQLVDLHARYAECGLRILAFPCNQ 90 (183)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCC
T ss_pred CCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhcCCeEEEEEECCC
Confidence 5799999999999999999999999999999876 8999999874
No 186
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=99.00 E-value=5.9e-11 Score=113.22 Aligned_cols=40 Identities=18% Similarity=0.164 Sum_probs=34.0
Q ss_pred cccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCC
Q psy1110 277 REKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDP 321 (366)
Q Consensus 277 ~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~ 321 (366)
++.+++++++|+++||+++ +|+ ++.|.++.++|.+|+.-.
T Consensus 239 ~~~~la~~~gI~~vPT~~i--~G~---~~~G~~~~~~L~~~l~~~ 278 (291)
T 3kp9_A 239 PQAQECTEAGITSYPTWII--NGR---TYTGVRSLEALAVASGYP 278 (291)
T ss_dssp CCCHHHHTTTCCSTTEEEE--TTE---EEESCCCHHHHHHHTCCC
T ss_pred hHHHHHHHcCCcccCeEEE--CCE---EecCCCCHHHHHHHHCCC
Confidence 4678999999999999665 887 389999999999998643
No 187
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=98.98 E-value=3.6e-09 Score=98.01 Aligned_cols=110 Identities=15% Similarity=0.181 Sum_probs=83.7
Q ss_pred CchHHHhhcCCCCeEEEEeeecccCCcchhccCCcc-ceEEeeecC-------eeeEee-cCCccHHHHHHHHhCcCCcc
Q psy1110 14 TSPLAKEIVKPKAITLGLIERLTEKADPVCTREKAK-KKVRRQKNA-------EVKYVY-ENGNTKDKIIEFVRNPQATS 84 (366)
Q Consensus 14 ~~~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~-Pti~~f~~g-------~~~~~y-~g~r~~~~i~~fi~~~~~~~ 84 (366)
...+|..++ ..+.|+.+.- .+++.++++. |+|.+|+++ +....| .|+++.++|.+|+.....+
T Consensus 43 f~~~A~~lr--~~~~F~~~~~-----~~v~~~~~~~~p~i~~fk~~~~~~kf~e~~~~y~~g~~~~~~l~~fi~~~~~P- 114 (252)
T 2h8l_A 43 FLKAASNLR--DNYRFAHTNV-----ESLVNEYDDNGEGIILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFG- 114 (252)
T ss_dssp HHHHHHHTT--TTSCEEEECC-----HHHHHHHCSSSEEEEEECCGGGCCTTSCSEEECCCSSCCHHHHHHHHHHHSSC-
T ss_pred HHHHHHhcc--cCcEEEEECh-----HHHHHHhCCCCCcEEEEcchhhcccccccccccCCCCcCHHHHHHHHHhcccC-
Confidence 345788887 6788988853 2599999999 999999863 345789 9999999999999987765
Q ss_pred hhhhccCCCcCCCCCceEEecchhhhhhhccCCeEEEEEECCCCh-h---hhcccHHHHHHHHHHhcc
Q psy1110 85 EEVKKKEQDWADTESEVVHLTDDNFDLVIQEESSVLVMFYAPWCG-H---CKKLKPEYEEAAATMKQQ 148 (366)
Q Consensus 85 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~i~~~k~vlV~F~a~wC~-~---Ck~~~p~~e~la~~~~~~ 148 (366)
.+.++|.+|+..+. +.+++|.|+..-+. . ...+...+.++|+.|+++
T Consensus 115 ---------------lv~e~t~~n~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vA~~~~~k 165 (252)
T 2h8l_A 115 ---------------ICPHMTEDNKDLIQ--GKDLLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDA 165 (252)
T ss_dssp ---------------SSCEECTTTHHHHS--SSSEEEEEECCBTTTBHHHHHHHHHHHHHHHHHHHHT
T ss_pred ---------------CeeecccccHhhhc--CCCeEEEEeecchhhcchhHHHHHHHHHHHHHHcccc
Confidence 68999999998863 45667777654332 1 124677888899988764
No 188
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=98.97 E-value=7.9e-09 Score=106.03 Aligned_cols=120 Identities=13% Similarity=0.136 Sum_probs=83.2
Q ss_pred chHHHhhcC-CCCeEEEEeeecccCCcchhccCCcc--ceEEeeecC----eeeEeecCCccHHHHHHHHhCcCCcchhh
Q psy1110 15 SPLAKEIVK-PKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNA----EVKYVYENGNTKDKIIEFVRNPQATSEEV 87 (366)
Q Consensus 15 ~~la~e~~~-~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g----~~~~~y~g~r~~~~i~~fi~~~~~~~~~~ 87 (366)
..||+++.. ...|.|++|||+.+...++|.+++|+ ||+.+|++| .....+.|+++.+.|.+|+.+......
T Consensus 53 ~~la~~~~~~~~~v~~~~VD~d~d~~~~l~~~~~V~~~PTl~~f~~g~~~G~~~~~~~g~~~~~~L~~~l~~~l~~~~-- 130 (519)
T 3t58_A 53 KELANDVKDWRPALNLAVLDCAEETNSAVCREFNIAGFPTVRFFQAFTKNGSGATLPGAGANVQTLRMRLIDALESHR-- 130 (519)
T ss_dssp HHHHHHHGGGTTTEEEEEEETTSGGGHHHHHHTTCCSBSEEEEECTTCCSCCCEEECCSSCCHHHHHHHHHHHHTTCC--
T ss_pred HHHHHHhhCcCCcEEEEEEECCccccHHHHHHcCCcccCEEEEEcCcccCCCceeEecCCCCHHHHHHHHHHHHhhcc--
Confidence 457777763 24799999999665566999999999 999999953 334566788999999999987665421
Q ss_pred hccCCCcCCCCCceEEecchhhhhhhcc--CCeEEEEEECCCChhhhcccHHHHHHHHHHhc
Q psy1110 88 KKKEQDWADTESEVVHLTDDNFDLVIQE--ESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQ 147 (366)
Q Consensus 88 ~~~~~~~~~~~~~v~~l~~~~~~~~i~~--~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~ 147 (366)
..++.....+..++.++++.++.. .+++++.|.... .+...+++..+..
T Consensus 131 ----~~~P~~~p~l~~it~~~l~~~l~~~~~~~vallF~~~~-------s~~~~~~~ldl~~ 181 (519)
T 3t58_A 131 ----DTWPPACPPLEPAKLNDIDGFFTRNKADYLALVFERED-------SYLGREVTLDLSQ 181 (519)
T ss_dssp ----SCCCTTCCCCSBCCHHHHTTGGGSCCCSEEEEEEECTT-------CCHHHHHHHHTTT
T ss_pred ----ccCCCCCCccCcCCHHHHHHHhccCCCCeEEEEecCCc-------hHHHHHHHHHhhc
Confidence 122222234555677888888744 567788887653 3355566655543
No 189
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=98.97 E-value=5.7e-10 Score=98.30 Aligned_cols=44 Identities=9% Similarity=-0.054 Sum_probs=40.5
Q ss_pred cCCeEEEEEECCCChhhhcccHHHHHHHHHHhcc-ccEEEeeccC
Q psy1110 115 EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQ-RAYYGMGMLR 158 (366)
Q Consensus 115 ~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~-v~~~~v~~~~ 158 (366)
.+++++|.||++||++|+...|.+.+++++|.+. +.++.|+++.
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~~~v~vv~is~d~ 92 (185)
T 2gs3_A 48 RGFVCIVTNVASQGGKTEVNYTQLVDLHARYAECGLRILAFPCNQ 92 (185)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECCT
T ss_pred CCCEEEEEEecCCCCchHHHHHHHHHHHHHhhcCCeEEEEEECcc
Confidence 5799999999999999999999999999999876 8999999874
No 190
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=98.95 E-value=2e-09 Score=97.30 Aligned_cols=43 Identities=12% Similarity=0.069 Sum_probs=40.3
Q ss_pred cCCeEEEEEECCCChhhhcccHHHHHHHHHHhcc-ccEEEeecc
Q psy1110 115 EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQ-RAYYGMGML 157 (366)
Q Consensus 115 ~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~-v~~~~v~~~ 157 (366)
.+++++|.|||+||++|+...|.+++++++|.+. +.++.|+++
T Consensus 46 ~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~~g~~vv~v~~d 89 (208)
T 2f8a_A 46 RGKVLLIENVASLGGTTVRDYTQMNELQRRLGPRGLVVLGFPCN 89 (208)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGGGTEEEEEEECC
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHccCCCeEEEEEECC
Confidence 5799999999999999999999999999999876 899999987
No 191
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=98.92 E-value=5.2e-10 Score=95.42 Aligned_cols=44 Identities=14% Similarity=0.339 Sum_probs=38.8
Q ss_pred cCC-eEEEEEE-CCCChhhhcccHHHHHHHHHHhcc-ccEEEeeccC
Q psy1110 115 EES-SVLVMFY-APWCGHCKKLKPEYEEAAATMKQQ-RAYYGMGMLR 158 (366)
Q Consensus 115 ~~k-~vlV~F~-a~wC~~Ck~~~p~~e~la~~~~~~-v~~~~v~~~~ 158 (366)
.++ +++|.|| ++||++|+...|.+.+++++|.+. +.++.|+++.
T Consensus 34 ~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~~~vv~is~d~ 80 (160)
T 1xvw_A 34 RGAKNVLLVFFPLAFTGICQGELDQLRDHLPEFENDDSAALAISVGP 80 (160)
T ss_dssp TTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGTSSSSEEEEEEESCC
T ss_pred cCCCCEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCcEEEEEeCCC
Confidence 355 9999998 999999999999999999999764 8899998864
No 192
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=98.92 E-value=6.7e-10 Score=97.79 Aligned_cols=44 Identities=18% Similarity=0.270 Sum_probs=40.2
Q ss_pred cCCeEEEEEE-CCCChhhhcccHHHHHHHHHHhcc-ccEEEeeccC
Q psy1110 115 EESSVLVMFY-APWCGHCKKLKPEYEEAAATMKQQ-RAYYGMGMLR 158 (366)
Q Consensus 115 ~~k~vlV~F~-a~wC~~Ck~~~p~~e~la~~~~~~-v~~~~v~~~~ 158 (366)
.+++++|.|| ++||++|....|.+.+++++|.+. +.++.|+++.
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~vs~d~ 75 (187)
T 1we0_A 30 KGKWSIVVFYPADFSFVCPTELEDVQKEYAELKKLGVEVYSVSTDT 75 (187)
T ss_dssp SSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHHTTEEEEEEESSC
T ss_pred CCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEEECCC
Confidence 4689999999 999999999999999999999874 8899998875
No 193
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=98.92 E-value=1.6e-09 Score=93.83 Aligned_cols=52 Identities=13% Similarity=0.162 Sum_probs=37.5
Q ss_pred eeEEEEeccc--ccccccccccccCCeEEEec-C-CceeeecCCCCCHHHHHHHHhC
Q psy1110 268 GILAAVDVTR--EKSLGKRFDIKGFPTLKYFR-A-GSVAFDAGHLRDASRLVEFMRD 320 (366)
Q Consensus 268 v~~a~vd~~~--~~~l~~~~~I~~~Ptl~~fk-~-G~~~~~~~g~~~~e~l~~fi~~ 320 (366)
+++.++|.+. ...+.++|++.++|+++++. + |+.+....| .+.++++++|++
T Consensus 78 fv~v~~d~~~~~~~~l~~~y~v~~~P~~~fld~~~G~~l~~~~g-~~~~~fl~~L~~ 133 (153)
T 2dlx_A 78 FIFWQVYHDSEEGQRYIQFYKLGDFPYVSILDPRTGQKLVEWHQ-LDVSSFLDQVTG 133 (153)
T ss_dssp EEEEEEESSSHHHHHHHHHHTCCSSSEEEEECTTTCCCCEEESS-CCHHHHHHHHHH
T ss_pred eEEEEEecCCHhHHHHHHHcCCCCCCEEEEEeCCCCcEeeecCC-CCHHHHHHHHHH
Confidence 4445555432 34677899999999999994 4 776777767 799988877654
No 194
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=98.91 E-value=6.3e-09 Score=89.49 Aligned_cols=43 Identities=14% Similarity=0.254 Sum_probs=39.5
Q ss_pred cCCeEEEEEECCC-ChhhhcccHHHHHHHHHHhccccEEEeeccC
Q psy1110 115 EESSVLVMFYAPW-CGHCKKLKPEYEEAAATMKQQRAYYGMGMLR 158 (366)
Q Consensus 115 ~~k~vlV~F~a~w-C~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~ 158 (366)
.+++++|.||++| |++|+...|.+.+++++| ..+.++.|+++.
T Consensus 43 ~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~~~~vv~is~d~ 86 (167)
T 2jsy_A 43 KGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL-GDVNVYTISADL 86 (167)
T ss_dssp TTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH-SSCEEEEEECSS
T ss_pred CCCeEEEEEecCCCCCchHHHHHHHHHHHHHc-CCCEEEEEECCC
Confidence 4789999999999 999999999999999999 779999999874
No 195
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=98.91 E-value=3.7e-10 Score=91.52 Aligned_cols=42 Identities=14% Similarity=0.250 Sum_probs=32.6
Q ss_pred cccccccccccCCeEEEecCCceeeecCCCC---CHHHHHHHHhCCC
Q psy1110 279 KSLGKRFDIKGFPTLKYFRAGSVAFDAGHLR---DASRLVEFMRDPT 322 (366)
Q Consensus 279 ~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~---~~e~l~~fi~~~~ 322 (366)
..+...|+++++||+ |.+|+.+..+.|.. +.+.|.+||++..
T Consensus 63 ~~l~~~~~v~~~Pt~--~~~g~~v~~~~~~~~~~~~~~l~~~l~~~g 107 (116)
T 2e7p_A 63 SALAHWTGRGTVPNV--FIGGKQIGGCDTVVEKHQRNELLPLLQDAA 107 (116)
T ss_dssp HHHHHHHSCCSSCEE--EETTEEEECHHHHHHHHHTTCHHHHHHHTT
T ss_pred HHHHHHhCCCCcCEE--EECCEEECChHHHHHHHhCChHHHHHHHcc
Confidence 457889999999999 45899887776655 5667888887654
No 196
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=98.90 E-value=1.9e-09 Score=92.84 Aligned_cols=44 Identities=11% Similarity=0.186 Sum_probs=40.0
Q ss_pred cCCeEEEEEECCCCh-hhhcccHHHHHHHHHHhcc---ccEEEeeccC
Q psy1110 115 EESSVLVMFYAPWCG-HCKKLKPEYEEAAATMKQQ---RAYYGMGMLR 158 (366)
Q Consensus 115 ~~k~vlV~F~a~wC~-~Ck~~~p~~e~la~~~~~~---v~~~~v~~~~ 158 (366)
.+++++|.||++||+ +|....|.+.++++.|.+. +.++.|+++.
T Consensus 32 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~ 79 (174)
T 1xzo_A 32 KGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDP 79 (174)
T ss_dssp TTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCT
T ss_pred CCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCC
Confidence 578999999999999 9999999999999998764 8999999874
No 197
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=98.89 E-value=2e-09 Score=94.21 Aligned_cols=44 Identities=11% Similarity=0.015 Sum_probs=40.7
Q ss_pred cCCeEEEEEECCCChhhhcccHHHHHHHHHHhcc-ccEEEeeccC
Q psy1110 115 EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQ-RAYYGMGMLR 158 (366)
Q Consensus 115 ~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~-v~~~~v~~~~ 158 (366)
.+++++|.|||+||++|+...|.+.+++++|.+. +.++.|+++.
T Consensus 37 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~is~d~ 81 (180)
T 3kij_A 37 KGKVSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLAFPCNQ 81 (180)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEEEECCC
T ss_pred CCCEEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEEEECCc
Confidence 5789999999999999999999999999999886 8899998864
No 198
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=98.86 E-value=3.5e-09 Score=94.62 Aligned_cols=44 Identities=9% Similarity=-0.035 Sum_probs=38.8
Q ss_pred cCCeEEEEEECCCChh-hhcccHHHHHHHHHHhc----cccEEEeeccC
Q psy1110 115 EESSVLVMFYAPWCGH-CKKLKPEYEEAAATMKQ----QRAYYGMGMLR 158 (366)
Q Consensus 115 ~~k~vlV~F~a~wC~~-Ck~~~p~~e~la~~~~~----~v~~~~v~~~~ 158 (366)
.+++++|.||++||++ |....|.+.++++.+.. .+.++.|+++.
T Consensus 40 ~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~~~~~v~vv~Is~D~ 88 (200)
T 2b7k_A 40 LGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSKYGITLQPLFITCDP 88 (200)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEEESCT
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHhhCCceEEEEEECCC
Confidence 5789999999999998 99999999998888763 58899999874
No 199
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=98.86 E-value=9.2e-10 Score=101.13 Aligned_cols=165 Identities=13% Similarity=0.108 Sum_probs=95.1
Q ss_pred cCCeEEEEEE-CCCChhhh-cccHHHHHHHHHHhcc-c-cEEEeeccCCcc----------------------cccccce
Q psy1110 115 EESSVLVMFY-APWCGHCK-KLKPEYEEAAATMKQQ-R-AYYGMGMLRHRP----------------------QASNVAV 168 (366)
Q Consensus 115 ~~k~vlV~F~-a~wC~~Ck-~~~p~~e~la~~~~~~-v-~~~~v~~~~~~~----------------------~~~~~~v 168 (366)
.+++++|.|| ++||++|. ...|.+.+++++|++. + .++.|+.+.... +++.||+
T Consensus 32 ~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~~~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~gv 111 (241)
T 1nm3_A 32 DNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKKYGVDDILVVSVNDTFVMNAWKEDEKSENISFIPDGNGEFTEGMGM 111 (241)
T ss_dssp TTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCHHHHHHHHHHTTCTTSEEEECTTSHHHHHTTC
T ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEcCCHHHHHHHHHhcCCCceEEEECCCcHHHHHhCc
Confidence 4689999999 99999999 9999999999999765 8 899998864211 2222332
Q ss_pred e---------------eeeecCCCcccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccC
Q psy1110 169 V---------------SSLRNKNGEPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYW 233 (366)
Q Consensus 169 ~---------------~~l~~~~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 233 (366)
. ++++ ++|.......|...... +-....+..+++.+....-
T Consensus 112 ~~~~~~~g~~~~~~p~t~li-~~G~i~~~~~~~~~~~~-----------------------~~~~~~~~~il~~l~~~~i 167 (241)
T 1nm3_A 112 LVGKEDLGFGKRSWRYSMLV-KNGVVEKMFIEPNEPGD-----------------------PFKVSDADTMLKYLAPQHQ 167 (241)
T ss_dssp EEECTTTTCCEEECCEEEEE-ETTEEEEEEECCSCSSC-----------------------CCSSSSHHHHHHHHCTTSC
T ss_pred eeecccccCcccceeEEEEE-ECCEEEEEEEeccCCCc-----------------------cceecCHHHHHHHhhhhcc
Confidence 1 1233 44444443333211100 0000112222222221111
Q ss_pred CCCCcCCcceeeeccccccccccCCCCCCCCccceeEEEEeccccc---ccccccccccCCeEEEecCCceeeecCCCCC
Q psy1110 234 RPESVGRGWELRQVGTGKRIKSINSGSFSPRQITGILAAVDVTREK---SLGKRFDIKGFPTLKYFRAGSVAFDAGHLRD 310 (366)
Q Consensus 234 ~~~~~~~~~~~~~c~~c~~~~p~~~~~~~~~~~~v~~a~vd~~~~~---~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~ 310 (366)
. ..-..=|...||++|++....|.+. ++.+-.+|.+.+. .+...++..++|++++ +|+.+. .
T Consensus 168 ~-~~~i~ly~~~~Cp~C~~a~~~L~~~------~i~~~~~~i~~~~~~~~l~~~~g~~~vP~~~~--~g~~i~------g 232 (241)
T 1nm3_A 168 V-QESISIFTKPGCPFCAKAKQLLHDK------GLSFEEIILGHDATIVSVRAVSGRTTVPQVFI--GGKHIG------G 232 (241)
T ss_dssp C-CCCEEEEECSSCHHHHHHHHHHHHH------TCCCEEEETTTTCCHHHHHHHTCCSSSCEEEE--TTEEEE------S
T ss_pred c-cceEEEEECCCChHHHHHHHHHHHc------CCceEEEECCCchHHHHHHHHhCCCCcCEEEE--CCEEEE------C
Confidence 1 1112235678999999999888432 2444455655443 4677788899999876 777543 2
Q ss_pred HHHHHHHH
Q psy1110 311 ASRLVEFM 318 (366)
Q Consensus 311 ~e~l~~fi 318 (366)
.+.|.+|+
T Consensus 233 ~~~i~~~l 240 (241)
T 1nm3_A 233 SDDLEKYF 240 (241)
T ss_dssp HHHHHHC-
T ss_pred HHHHHHHh
Confidence 45566554
No 200
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=98.85 E-value=1e-09 Score=97.44 Aligned_cols=44 Identities=9% Similarity=0.212 Sum_probs=40.2
Q ss_pred cCCeEEEEEE-CCCChhhhcccHHHHHHHHHHhcc-ccEEEeeccC
Q psy1110 115 EESSVLVMFY-APWCGHCKKLKPEYEEAAATMKQQ-RAYYGMGMLR 158 (366)
Q Consensus 115 ~~k~vlV~F~-a~wC~~Ck~~~p~~e~la~~~~~~-v~~~~v~~~~ 158 (366)
.+++++|.|| ++||++|+...|.+.+++++|.+. +.++.|+++.
T Consensus 44 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Vs~d~ 89 (195)
T 2bmx_A 44 PGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFEDRDAQILGVSIDS 89 (195)
T ss_dssp TTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHTTTEEEEEEESSC
T ss_pred CCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 4789999999 999999999999999999999874 8999999875
No 201
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=98.83 E-value=1.3e-09 Score=96.97 Aligned_cols=44 Identities=9% Similarity=0.273 Sum_probs=40.1
Q ss_pred cCCeEEEEEE-CCCChhhhcccHHHHHHHHHHhcc-ccEEEeeccC
Q psy1110 115 EESSVLVMFY-APWCGHCKKLKPEYEEAAATMKQQ-RAYYGMGMLR 158 (366)
Q Consensus 115 ~~k~vlV~F~-a~wC~~Ck~~~p~~e~la~~~~~~-v~~~~v~~~~ 158 (366)
.+++++|.|| ++||++|+...|.+.+++++|.+. +.++.|+++.
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~ 77 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHEKGFNVIGVSIDS 77 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHHTTEEEEEEESSC
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEECCC
Confidence 4689999999 999999999999999999999765 8999999875
No 202
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=98.82 E-value=2.9e-08 Score=91.93 Aligned_cols=109 Identities=12% Similarity=0.101 Sum_probs=83.9
Q ss_pred chHHHhhcCCCCeEEEEeeecccCCcchhccCCcc-ceEEeeecC-------eeeEeec--CCccHHHHHHHHhCcCCcc
Q psy1110 15 SPLAKEIVKPKAITLGLIERLTEKADPVCTREKAK-KKVRRQKNA-------EVKYVYE--NGNTKDKIIEFVRNPQATS 84 (366)
Q Consensus 15 ~~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~-Pti~~f~~g-------~~~~~y~--g~r~~~~i~~fi~~~~~~~ 84 (366)
..+|..++ ..+.|+.+.- .+++.+++|+ |+|.+|+++ +....|. |+++.++|.+|+.....+
T Consensus 45 ~~~A~~lr--~~~~F~~t~~-----~~v~~~~~v~~p~ivlfk~~~~~~kfde~~~~y~g~~~~~~~~l~~fi~~~~~P- 116 (250)
T 3ec3_A 45 QDAANTLR--EDYKFHHTFS-----TEIAKFLKVSLGKLVLMQPEKFQSKYEPRMHVMDVQGSTEASAIKDYVVKHALP- 116 (250)
T ss_dssp HHHHHHHT--TTCCEEEECC-----HHHHHHHTCCSSEEEEECCGGGCCTTSCSCEEEECCTTSCHHHHHHHHHHHSSC-
T ss_pred HHHHHhhh--cCcEEEEECc-----HHHHHHcCCCCCeEEEEecchhhccccccceeccCCCCCCHHHHHHHHHHcCCC-
Confidence 46777777 7888998753 2589999999 999999963 4457888 589999999999988776
Q ss_pred hhhhccCCCcCCCCCceEEecchhhhhhhccCCeEEEEEEC-CCC----hhhhcccHHHHHHHHHHhcc
Q psy1110 85 EEVKKKEQDWADTESEVVHLTDDNFDLVIQEESSVLVMFYA-PWC----GHCKKLKPEYEEAAATMKQQ 148 (366)
Q Consensus 85 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~i~~~k~vlV~F~a-~wC----~~Ck~~~p~~e~la~~~~~~ 148 (366)
-+.++|.+|+..+.. ++++++.|+. +.+ ...+.+...++++|++|+ +
T Consensus 117 ---------------lv~e~t~~n~~~~~~-~~~l~~~~~~~d~~~~~~~~~~~~~~~~~~vAk~~k-k 168 (250)
T 3ec3_A 117 ---------------LVGHRKTSNDAKRYS-KRPLVVVYYSVDFSFDYRTATQFWRNKVLEVAKDFP-E 168 (250)
T ss_dssp ---------------TEEEECTTTHHHHSC-SSSEEEEEECCCCSTTTHHHHHHHHHHHHHHHTTCT-T
T ss_pred ---------------ceeecCccchhhhhc-cCccEEEEEecccccccchhHHHHHHHHHHHHHhhc-c
Confidence 799999999988774 6777777775 333 233456777888888776 6
No 203
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=98.81 E-value=3.2e-09 Score=94.39 Aligned_cols=46 Identities=11% Similarity=0.157 Sum_probs=41.1
Q ss_pred cCCeEEEEEE-CCCChhhhcccHHHHHHHHHHhcc-ccEEEeeccCCc
Q psy1110 115 EESSVLVMFY-APWCGHCKKLKPEYEEAAATMKQQ-RAYYGMGMLRHR 160 (366)
Q Consensus 115 ~~k~vlV~F~-a~wC~~Ck~~~p~~e~la~~~~~~-v~~~~v~~~~~~ 160 (366)
.+++++|.|| ++||++|....|.+.+++++|.+. +.++.|+++...
T Consensus 33 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~d~~~ 80 (197)
T 1qmv_A 33 KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRKLGCEVLGVSVDSQF 80 (197)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCHH
Confidence 4789999999 999999999999999999999864 999999987643
No 204
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=98.80 E-value=1.6e-08 Score=88.25 Aligned_cols=43 Identities=16% Similarity=0.165 Sum_probs=38.2
Q ss_pred cCCeEEEEEECCC-ChhhhcccHHHHHHHHHHhccccEEEeeccCC
Q psy1110 115 EESSVLVMFYAPW-CGHCKKLKPEYEEAAATMKQQRAYYGMGMLRH 159 (366)
Q Consensus 115 ~~k~vlV~F~a~w-C~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~ 159 (366)
.+++++|.||++| |++|....|.+.+++++ ..+.++.|+++..
T Consensus 43 ~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~--~~v~vv~Is~D~~ 86 (175)
T 1xvq_A 43 RGKSVLLNIFPSVDTPVCATSVRTFDERAAA--SGATVLCVSKDLP 86 (175)
T ss_dssp TTSCEEEEECSCCCSSCCCHHHHHHHHHHHH--TTCEEEEEESSCH
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHhh--cCCEEEEEECCCH
Confidence 4789999999999 99999999999999988 6689999998653
No 205
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=98.74 E-value=2.4e-08 Score=86.20 Aligned_cols=43 Identities=9% Similarity=0.149 Sum_probs=38.7
Q ss_pred cCCeEEEEEE-CCCChhhhcccHHHHHHHHHHhccccEEEeeccC
Q psy1110 115 EESSVLVMFY-APWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLR 158 (366)
Q Consensus 115 ~~k~vlV~F~-a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~ 158 (366)
.+++++|.|| ++||++|....|.+.+++++| ..+.++.|+++.
T Consensus 42 ~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~-~~v~vv~Is~d~ 85 (165)
T 1q98_A 42 ASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL-SNTIVLCISADL 85 (165)
T ss_dssp TTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS-TTEEEEEEESSC
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHc-CCCEEEEEeCCC
Confidence 5789999999 799999999999999999999 678899998764
No 206
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=98.74 E-value=1.2e-09 Score=98.21 Aligned_cols=113 Identities=8% Similarity=0.103 Sum_probs=68.5
Q ss_pred chhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCcCCcchhhhccCCCcCCCCCceEEecchhhhhhh--ccC
Q psy1110 41 PVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNPQATSEEVKKKEQDWADTESEVVHLTDDNFDLVI--QEE 116 (366)
Q Consensus 41 ~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i--~~~ 116 (366)
....++||+ |++.+ +|.+.....+ .+.+++.+|+.+... ..+...+.+.+..... ...+.++..+. ..+
T Consensus 41 ~~a~~~gi~gvP~fvi--ngk~~~~~~~-~~~~~~~~f~~~~~~--l~~~L~s~~~p~~~~~--~~~g~~y~~l~~p~~~ 113 (197)
T 1un2_A 41 KAAADVQLRGVPAMFV--NGKYQLNPQG-MDTSNMDVFVQQYAD--TVKYLSEKKGGGTGAQ--YEDGKQYTTLEKPVAG 113 (197)
T ss_dssp HHHHHTTCCSSSEEEE--TTTEEECGGG-SCCSSHHHHHHHHHH--HHHHHTC-----------CCBTTTEEECSSCCTT
T ss_pred HHHHHcCCCcCCEEEE--cceEecCccc-cccccHHHHHHHHHH--HHHHHHhCcccccccc--cCCCCCceEccCCCCC
Confidence 578889999 99865 5655443222 232333333332222 1222222222111111 12344444433 236
Q ss_pred CeEEEEEECCCChhhhcccHHH---HHHHHHHhccccEEEeeccCCc
Q psy1110 117 SSVLVMFYAPWCGHCKKLKPEY---EEAAATMKQQRAYYGMGMLRHR 160 (366)
Q Consensus 117 k~vlV~F~a~wC~~Ck~~~p~~---e~la~~~~~~v~~~~v~~~~~~ 160 (366)
++++|.||+.||+||+.+.|.| +++++.+.+++.|.+++++.+.
T Consensus 114 ~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~~~v~~~~~~v~~~~ 160 (197)
T 1un2_A 114 APQVLEFFSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKYHVNFMG 160 (197)
T ss_dssp CCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSCTTCCEEEEECSSSS
T ss_pred CCEEEEEECCCChhHHHhCcccccHHHHHHHCCCCCEEEEeccCcCC
Confidence 7899999999999999999999 9999999888999999998654
No 207
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=98.74 E-value=3.9e-08 Score=91.00 Aligned_cols=123 Identities=19% Similarity=0.307 Sum_probs=98.8
Q ss_pred ceEEec-chhhhhhhccCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCCCc
Q psy1110 100 EVVHLT-DDNFDLVIQEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKNGE 178 (366)
Q Consensus 100 ~v~~l~-~~~~~~~i~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~G~ 178 (366)
.+..|+ .+.++.+++++..++|-|+++||+ .....|.++|+.+.+.
T Consensus 7 ~v~~l~s~~~~~~~l~~~~v~vvgff~~~~~---~~~~~f~~~A~~lr~~------------------------------ 53 (252)
T 2h8l_A 7 ASVPLRTEEEFKKFISDKDASIVGFFDDSFS---EAHSEFLKAASNLRDN------------------------------ 53 (252)
T ss_dssp CEEECCSHHHHHHHHTSSSCEEEEEESCTTS---HHHHHHHHHHHHTTTT------------------------------
T ss_pred CceeecCHHHHHHHhhcCCeEEEEEECCCCC---hHHHHHHHHHHhcccC------------------------------
Confidence 577885 567788898888999999999864 5788999999999776
Q ss_pred ccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccCC
Q psy1110 179 PTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSINS 258 (366)
Q Consensus 179 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~~ 258 (366)
T Consensus 54 -------------------------------------------------------------------------------- 53 (252)
T 2h8l_A 54 -------------------------------------------------------------------------------- 53 (252)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCccceeEEEEecccccccccccccccCCeEEEecCC-------ceeeec-CCCCCHHHHHHHHhCCCCCCCCCCC
Q psy1110 259 GSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAG-------SVAFDA-GHLRDASRLVEFMRDPTEPPPPPPP 330 (366)
Q Consensus 259 ~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G-------~~~~~~-~g~~~~e~l~~fi~~~~~~~~~~~~ 330 (366)
+.|+.+ .+..++++|++++ |++++|+.+ .....| .|.++.++|.+||..+..|.
T Consensus 54 ---------~~F~~~---~~~~v~~~~~~~~-p~i~~fk~~~~~~kf~e~~~~y~~g~~~~~~l~~fi~~~~~Pl----- 115 (252)
T 2h8l_A 54 ---------YRFAHT---NVESLVNEYDDNG-EGIILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFGI----- 115 (252)
T ss_dssp ---------SCEEEE---CCHHHHHHHCSSS-EEEEEECCGGGCCTTSCSEEECCCSSCCHHHHHHHHHHHSSCS-----
T ss_pred ---------cEEEEE---ChHHHHHHhCCCC-CcEEEEcchhhcccccccccccCCCCcCHHHHHHHHHhcccCC-----
Confidence 344443 2456888999997 999999854 234577 88899999999999999988
Q ss_pred CCCCCCCCCeeEEechhcHHHHhhccCceEEEEec
Q psy1110 331 EPAWAEEPSEVYHLGADNFASTLRKKKHALVMFYA 365 (366)
Q Consensus 331 ~~~~~~~~~~v~~lt~~~~~~~~~~~~~~~v~fy~ 365 (366)
|.++|.+++..+. +.+.+|+||.
T Consensus 116 ----------v~e~t~~n~~~~~--~~~~~v~~~~ 138 (252)
T 2h8l_A 116 ----------CPHMTEDNKDLIQ--GKDLLIAYYD 138 (252)
T ss_dssp ----------SCEECTTTHHHHS--SSSEEEEEEC
T ss_pred ----------eeecccccHhhhc--CCCeEEEEee
Confidence 9999999999873 4577788774
No 208
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=98.73 E-value=1e-08 Score=87.59 Aligned_cols=44 Identities=7% Similarity=0.117 Sum_probs=39.7
Q ss_pred cCCeEEEEEEC-CCChhhhcccHHHHHHHHHHhcc-ccEEEeeccC
Q psy1110 115 EESSVLVMFYA-PWCGHCKKLKPEYEEAAATMKQQ-RAYYGMGMLR 158 (366)
Q Consensus 115 ~~k~vlV~F~a-~wC~~Ck~~~p~~e~la~~~~~~-v~~~~v~~~~ 158 (366)
.+++++|.||+ +||++|....|.+.+++++|.+. +.++.|+++.
T Consensus 34 ~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~vs~d~ 79 (163)
T 3gkn_A 34 AGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILGVSRDS 79 (163)
T ss_dssp TTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 46799999998 99999999999999999999876 8899998873
No 209
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=98.72 E-value=9.8e-09 Score=93.47 Aligned_cols=46 Identities=9% Similarity=0.165 Sum_probs=41.1
Q ss_pred cCCeEEEEEEC-CCChhhhcccHHHHHHHHHHhcc-ccEEEeeccCCc
Q psy1110 115 EESSVLVMFYA-PWCGHCKKLKPEYEEAAATMKQQ-RAYYGMGMLRHR 160 (366)
Q Consensus 115 ~~k~vlV~F~a-~wC~~Ck~~~p~~e~la~~~~~~-v~~~~v~~~~~~ 160 (366)
.+++++|.||+ +||++|....|.+.+++++|++. +.++.|+++...
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~~~~v~vv~Is~D~~~ 115 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFNSRNCQVIACSTDSQY 115 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHH
Confidence 57899999997 99999999999999999999875 899999987543
No 210
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=98.71 E-value=2e-09 Score=82.01 Aligned_cols=27 Identities=19% Similarity=0.337 Sum_probs=23.1
Q ss_pred EEEEEECCCChhhhcccHHHHHHHHHH
Q psy1110 119 VLVMFYAPWCGHCKKLKPEYEEAAATM 145 (366)
Q Consensus 119 vlV~F~a~wC~~Ck~~~p~~e~la~~~ 145 (366)
-++.||++||++|+.+.|.++++++.+
T Consensus 3 ~~~~f~~~~C~~C~~~~~~l~~~~~~~ 29 (80)
T 2k8s_A 3 SKAIFYHAGCPVCVSAEQAVANAIDPS 29 (80)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHSCTT
T ss_pred ceEEEeCCCCCchHHHHHHHHHHHHhc
Confidence 367899999999999999999886554
No 211
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=98.70 E-value=1.3e-08 Score=92.63 Aligned_cols=45 Identities=11% Similarity=0.255 Sum_probs=40.5
Q ss_pred cCCeEEEEEE-CCCChhhhcccHHHHHHHHHHhc-cccEEEeeccCC
Q psy1110 115 EESSVLVMFY-APWCGHCKKLKPEYEEAAATMKQ-QRAYYGMGMLRH 159 (366)
Q Consensus 115 ~~k~vlV~F~-a~wC~~Ck~~~p~~e~la~~~~~-~v~~~~v~~~~~ 159 (366)
.+++++|.|| ++||++|+...|.+.+++++|.+ .+.++.|+++..
T Consensus 55 ~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~~ 101 (220)
T 1zye_A 55 KGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHDVNCEVVAVSVDSH 101 (220)
T ss_dssp TTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHHTTEEEEEEESSCH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCH
Confidence 4699999999 99999999999999999999976 489999998753
No 212
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=98.70 E-value=9.8e-09 Score=90.73 Aligned_cols=44 Identities=18% Similarity=0.272 Sum_probs=39.7
Q ss_pred cCCeEEEEEE-CCCChhhhcccHHHHHHHHHHhcc-ccEEEeeccC
Q psy1110 115 EESSVLVMFY-APWCGHCKKLKPEYEEAAATMKQQ-RAYYGMGMLR 158 (366)
Q Consensus 115 ~~k~vlV~F~-a~wC~~Ck~~~p~~e~la~~~~~~-v~~~~v~~~~ 158 (366)
.+++++|.|| ++||++|....|.+.+++++|.+. +.++.|+++.
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~Is~d~ 75 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIALDKALDSFKERNVELLGCSVDS 75 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHHHTTEEEEEEESSC
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeCC
Confidence 4689999999 999999999999999999999754 8899999874
No 213
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=98.70 E-value=7.5e-09 Score=92.45 Aligned_cols=45 Identities=9% Similarity=0.173 Sum_probs=40.5
Q ss_pred cCCeEEEEEE-CCCChhhhcccHHHHHHHHHHhcc-ccEEEeeccCC
Q psy1110 115 EESSVLVMFY-APWCGHCKKLKPEYEEAAATMKQQ-RAYYGMGMLRH 159 (366)
Q Consensus 115 ~~k~vlV~F~-a~wC~~Ck~~~p~~e~la~~~~~~-v~~~~v~~~~~ 159 (366)
.+++++|.|| ++||++|....|.+.+++++|.+. +.++.|+++..
T Consensus 35 ~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~~~~v~vi~Is~D~~ 81 (202)
T 1uul_A 35 KGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFSDIGCEVLACSMDSE 81 (202)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCH
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCH
Confidence 4689999999 999999999999999999999864 99999998753
No 214
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=98.69 E-value=1.4e-08 Score=87.30 Aligned_cols=44 Identities=11% Similarity=0.142 Sum_probs=38.9
Q ss_pred cCCeEEEEEEC-CCChhhhcccHHHHHHHHHHhccccEEEeeccCC
Q psy1110 115 EESSVLVMFYA-PWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRH 159 (366)
Q Consensus 115 ~~k~vlV~F~a-~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~ 159 (366)
.+++++|.||+ +||++|....|.+.+++++| ..+.++.|+++..
T Consensus 41 ~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~-~~v~vv~is~d~~ 85 (163)
T 1psq_A 41 DGKKKVLSVVPSIDTGICSTQTRRFNEELAGL-DNTVVLTVSMDLP 85 (163)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSCH
T ss_pred CCCEEEEEEECCCCCCccHHHHHHHHHHHHHc-CCcEEEEEECCCH
Confidence 57899999995 99999999999999999988 6789999988653
No 215
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=98.68 E-value=6e-09 Score=89.65 Aligned_cols=60 Identities=23% Similarity=0.361 Sum_probs=40.8
Q ss_pred CcCCCCCceEEecchhhhhhhccCCeEEEEEE-CCCChhhhcccHHHHHHHHHHhcc-ccEEEeeccCC
Q psy1110 93 DWADTESEVVHLTDDNFDLVIQEESSVLVMFY-APWCGHCKKLKPEYEEAAATMKQQ-RAYYGMGMLRH 159 (366)
Q Consensus 93 ~~~~~~~~v~~l~~~~~~~~i~~~k~vlV~F~-a~wC~~Ck~~~p~~e~la~~~~~~-v~~~~v~~~~~ 159 (366)
.+.+..+....|++. .+++++|.|| ++||++|....|.+.++++++... +.++.|+.+..
T Consensus 14 ~l~~~~G~~~~l~d~-------~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~~~~~~~~v~vs~d~~ 75 (157)
T 4g2e_A 14 ELPDTELKKVKLSAL-------KGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKFNQVNAVVLGISVDPP 75 (157)
T ss_dssp EEEBTTSCEEEGGGG-------TTSCEEEEECSCTTCCC------CCSCGGGGGGGCSSEEEEEESSCH
T ss_pred EeECCCCCEEeHHHH-------CCCeEEEEecCCCCCCccccchhhcccccccccccCceEeeecccch
Confidence 334455555555543 5789999999 999999999999999999888775 88888887653
No 216
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=98.66 E-value=3.3e-08 Score=86.01 Aligned_cols=44 Identities=5% Similarity=0.082 Sum_probs=38.5
Q ss_pred cCCeEEEEEECCCCh-hhhcccHHHHHHHHHHh---ccccEEEeeccC
Q psy1110 115 EESSVLVMFYAPWCG-HCKKLKPEYEEAAATMK---QQRAYYGMGMLR 158 (366)
Q Consensus 115 ~~k~vlV~F~a~wC~-~Ck~~~p~~e~la~~~~---~~v~~~~v~~~~ 158 (366)
.+++++|.||++||+ .|....+.+.++++++. .++.++.|+++.
T Consensus 27 ~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~~~~~~~~vv~is~d~ 74 (170)
T 3me7_A 27 KGKPIILSPIYTHCRAACPLITKSLLKVIPKLGTPGKDFWVITFTFDP 74 (170)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHCCBTTTBEEEEEECCT
T ss_pred CCCEEEEEEECCCCCchhHHHHHHHHHHHHHhhhcCCceEEEEEECCC
Confidence 479999999999997 69999999999999996 348888888874
No 217
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=98.66 E-value=1.2e-07 Score=87.69 Aligned_cols=124 Identities=14% Similarity=0.183 Sum_probs=99.3
Q ss_pred ceEEecc-hhhhhhhcc-CCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcccccccceeeeeecCCC
Q psy1110 100 EVVHLTD-DNFDLVIQE-ESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRPQASNVAVVSSLRNKNG 177 (366)
Q Consensus 100 ~v~~l~~-~~~~~~i~~-~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~~~~~~~v~~~l~~~~G 177 (366)
.+..|++ +++++++++ +..++|-|++++|+ ...+.|.++|+.+.+.
T Consensus 7 ~v~~l~s~~~~~~~~~~~~~v~vVgff~~~~~---~~~~~F~~~A~~lr~~----------------------------- 54 (250)
T 3ec3_A 7 PSKEILTLKQVQEFLKDGDDVVILGVFQGVGD---PGYLQYQDAANTLRED----------------------------- 54 (250)
T ss_dssp SSEECCCHHHHHHHHHHCSSCEEEEECSCTTC---HHHHHHHHHHHHHTTT-----------------------------
T ss_pred CceecCCHHHHHHHHhcCCCeEEEEEEcCCCc---hHHHHHHHHHHhhhcC-----------------------------
Confidence 5677765 889999988 89999999999865 6889999999999777
Q ss_pred cccccCCCCCCCCCCCccccCCCCCCCCCCCCCCCCCCCCCCChhhhHhhhhcccCCCCCcCCcceeeeccccccccccC
Q psy1110 178 EPTTHPSGTPQTSDTPRTQCCHPAAHSPASPIRQTPHPEPHRPVRSLLLLLLGSYWRPESVGRGWELRQVGTGKRIKSIN 257 (366)
Q Consensus 178 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~c~~c~~~~p~~ 257 (366)
T Consensus 55 -------------------------------------------------------------------------------- 54 (250)
T 3ec3_A 55 -------------------------------------------------------------------------------- 54 (250)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCccceeEEEEecccccccccccccccCCeEEEecCC-------ceeeecC--CCCCHHHHHHHHhCCCCCCCCC
Q psy1110 258 SGSFSPRQITGILAAVDVTREKSLGKRFDIKGFPTLKYFRAG-------SVAFDAG--HLRDASRLVEFMRDPTEPPPPP 328 (366)
Q Consensus 258 ~~~~~~~~~~v~~a~vd~~~~~~l~~~~~I~~~Ptl~~fk~G-------~~~~~~~--g~~~~e~l~~fi~~~~~~~~~~ 328 (366)
+.|+.+ .+.+++.++++++ |++++|+.+ .....|. |.++.++|.+||..+..|.
T Consensus 55 ----------~~F~~t---~~~~v~~~~~v~~-p~ivlfk~~~~~~kfde~~~~y~g~~~~~~~~l~~fi~~~~~Pl--- 117 (250)
T 3ec3_A 55 ----------YKFHHT---FSTEIAKFLKVSL-GKLVLMQPEKFQSKYEPRMHVMDVQGSTEASAIKDYVVKHALPL--- 117 (250)
T ss_dssp ----------CCEEEE---CCHHHHHHHTCCS-SEEEEECCGGGCCTTSCSCEEEECCTTSCHHHHHHHHHHHSSCT---
T ss_pred ----------cEEEEE---CcHHHHHHcCCCC-CeEEEEecchhhccccccceeccCCCCCCHHHHHHHHHHcCCCc---
Confidence 344443 3456778899988 999999853 2234555 5789999999999999999
Q ss_pred CCCCCCCCCCCeeEEechhcHHHHhhccCceEEEEec
Q psy1110 329 PPEPAWAEEPSEVYHLGADNFASTLRKKKHALVMFYA 365 (366)
Q Consensus 329 ~~~~~~~~~~~~v~~lt~~~~~~~~~~~~~~~v~fy~ 365 (366)
|.++|.+|+..+. .+.+.+++||.
T Consensus 118 ------------v~e~t~~n~~~~~-~~~~l~~~~~~ 141 (250)
T 3ec3_A 118 ------------VGHRKTSNDAKRY-SKRPLVVVYYS 141 (250)
T ss_dssp ------------EEEECTTTHHHHS-CSSSEEEEEEC
T ss_pred ------------eeecCccchhhhh-ccCccEEEEEe
Confidence 9999999999887 46777777774
No 218
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=98.66 E-value=2.2e-08 Score=80.01 Aligned_cols=52 Identities=25% Similarity=0.371 Sum_probs=37.9
Q ss_pred eeEEEEecc--cccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCCCC
Q psy1110 268 GILAAVDVT--REKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPTEP 324 (366)
Q Consensus 268 v~~a~vd~~--~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~~~ 324 (366)
+.+..+|.+ ++..+..+|+ .++|+++ .+|+.+ .. |..+.+.|.++|.+....
T Consensus 44 i~~~~vdi~~~~~~el~~~~g-~~vP~l~--~~g~~~-~~-~g~~~~~l~~~l~~~~~~ 97 (100)
T 1wjk_A 44 FILQEVDITLPENSTWYERYK-FDIPVFH--LNGQFL-MM-HRVNTSKLEKQLRKLSGP 97 (100)
T ss_dssp SEEEEEETTSSTTHHHHHHSS-SSCSEEE--ESSSEE-EE-SSCCHHHHHHHHHSSSCS
T ss_pred CeEEEEECCCcchHHHHHHHC-CCCCEEE--ECCEEE-Ee-cCCCHHHHHHHHHHHHhh
Confidence 345566665 5677888999 9999874 588864 33 447889999999887653
No 219
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=98.66 E-value=2.4e-08 Score=86.42 Aligned_cols=44 Identities=11% Similarity=0.074 Sum_probs=39.1
Q ss_pred cCCeEEEEEE-CCCChhhhcccHHHHHHHHHHhccccEEEeeccCC
Q psy1110 115 EESSVLVMFY-APWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRH 159 (366)
Q Consensus 115 ~~k~vlV~F~-a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~ 159 (366)
.+++++|.|| ++||++|....|.+.+++++| ..+.++.|+++..
T Consensus 46 ~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~-~~v~vv~Is~d~~ 90 (171)
T 2yzh_A 46 KDVVQVIITVPSLDTPVCETETKKFNEIMAGM-EGVDVTVVSMDLP 90 (171)
T ss_dssp CSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSCH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHc-CCceEEEEeCCCH
Confidence 4789999999 899999999999999999988 7789999988753
No 220
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=98.64 E-value=3.4e-08 Score=85.16 Aligned_cols=43 Identities=9% Similarity=0.126 Sum_probs=36.7
Q ss_pred cCCeEEEEEE-CCCChhhhcccHHHHHHHHHHhccccEEEeeccCC
Q psy1110 115 EESSVLVMFY-APWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRH 159 (366)
Q Consensus 115 ~~k~vlV~F~-a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~ 159 (366)
.+++++|.|| +.||++|....|.+.+++++ ..+.++.|+++..
T Consensus 45 ~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~--~~~~vv~is~d~~ 88 (166)
T 3p7x_A 45 AGKKKLISVVPSIDTGVCDQQTRKFNSDASK--EEGIVLTISADLP 88 (166)
T ss_dssp TTSCEEEEECSCTTSHHHHHHHHHHHHHSCT--TTSEEEEEESSCH
T ss_pred CCCcEEEEEECCCCCCccHHHHHHHHHHhhc--CCCEEEEEECCCH
Confidence 5789999999 78999999999999999877 5688888887643
No 221
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=98.63 E-value=1.9e-08 Score=91.12 Aligned_cols=44 Identities=16% Similarity=0.240 Sum_probs=39.7
Q ss_pred cCCeEEEEEE-CCCChhhhcccHHHHHHHHHHhc-cccEEEeeccC
Q psy1110 115 EESSVLVMFY-APWCGHCKKLKPEYEEAAATMKQ-QRAYYGMGMLR 158 (366)
Q Consensus 115 ~~k~vlV~F~-a~wC~~Ck~~~p~~e~la~~~~~-~v~~~~v~~~~ 158 (366)
.+++++|.|| ++||++|....|.+.+++++|.+ .+.++.|+++.
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~~~~v~vv~Is~D~ 96 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIALDKALDAFHERNVELLGCSVDS 96 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHHHTTEEEEEEESSC
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 4689999999 99999999999999999999975 48999999874
No 222
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=98.63 E-value=8.6e-08 Score=87.30 Aligned_cols=43 Identities=19% Similarity=0.278 Sum_probs=39.3
Q ss_pred cCCeEEEEEECCCChhhhcccHHHHHHHHHHhcc-ccEEEeeccC
Q psy1110 115 EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQ-RAYYGMGMLR 158 (366)
Q Consensus 115 ~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~-v~~~~v~~~~ 158 (366)
.+++++|.|||+||++|+ ..|.+++++++|.+. +.++.|+|++
T Consensus 55 ~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~~g~~Vlgvs~d~ 98 (215)
T 2i3y_A 55 VGKHILFVNVATYCGLTA-QYPELNALQEELKPYGLVVLGFPCNQ 98 (215)
T ss_dssp TTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGGGTEEEEEEECCC
T ss_pred CCCEEEEEEeCCCCCChH-hHHHHHHHHHHhccCCeEEEEEEccc
Confidence 689999999999999999 899999999999876 8999999864
No 223
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=98.60 E-value=1.3e-07 Score=84.68 Aligned_cols=44 Identities=7% Similarity=0.116 Sum_probs=38.9
Q ss_pred cCCeEEEEEE-CCCChhhhcccHHHHHHHHHHhccccEEEeeccCC
Q psy1110 115 EESSVLVMFY-APWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRH 159 (366)
Q Consensus 115 ~~k~vlV~F~-a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~ 159 (366)
.+++++|.|| +.||++|....|.+.+++++| ..+.++.|++|..
T Consensus 77 ~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~-~~v~vv~Is~D~~ 121 (200)
T 3zrd_A 77 AGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL-ENTVVLCISSDLP 121 (200)
T ss_dssp TTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS-TTEEEEEEESSCH
T ss_pred CCCcEEEEEECCCCCchhHHHHHHHHHHHHHh-CCCEEEEEECCCH
Confidence 5789999999 679999999999999999999 6688999988743
No 224
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=98.58 E-value=4.2e-08 Score=89.56 Aligned_cols=44 Identities=11% Similarity=0.249 Sum_probs=39.4
Q ss_pred cCCeEEEEEE-CCCChhhhcccHHHHHHHHHHhc-cccEEEeeccC
Q psy1110 115 EESSVLVMFY-APWCGHCKKLKPEYEEAAATMKQ-QRAYYGMGMLR 158 (366)
Q Consensus 115 ~~k~vlV~F~-a~wC~~Ck~~~p~~e~la~~~~~-~v~~~~v~~~~ 158 (366)
.+++++|.|| ++||++|....|.+.+++++|.+ .+.++.|+++.
T Consensus 55 ~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~~~v~vv~Is~D~ 100 (221)
T 2c0d_A 55 GQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFENKNVELLGISVDS 100 (221)
T ss_dssp TTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHHTTEEEEEEESSC
T ss_pred CCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 4689999999 99999999999999999999975 48899998864
No 225
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=98.57 E-value=3.4e-08 Score=84.39 Aligned_cols=43 Identities=12% Similarity=0.234 Sum_probs=35.8
Q ss_pred CCeEEEEEE-CCCChhhhcccHHHHHHHHHHhccccEEEeeccC
Q psy1110 116 ESSVLVMFY-APWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLR 158 (366)
Q Consensus 116 ~k~vlV~F~-a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~ 158 (366)
+++++|.|| ++||++|....|.+.+++++|.+.-.++.|+++.
T Consensus 35 ~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~~~~~vv~is~d~ 78 (159)
T 2a4v_A 35 NRVVVFFVYPRASTPGSTRQASGFRDNYQELKEYAAVFGLSADS 78 (159)
T ss_dssp CSEEEEEECSSSSSHHHHHHHHHHHHHHHHHTTTCEEEEEESCC
T ss_pred CCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEeCCC
Confidence 347899987 9999999999999999999997543777777764
No 226
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=98.57 E-value=7.4e-08 Score=73.33 Aligned_cols=27 Identities=22% Similarity=0.285 Sum_probs=24.4
Q ss_pred EEEEECCCChhhhcccHHHHHHHHHHh
Q psy1110 120 LVMFYAPWCGHCKKLKPEYEEAAATMK 146 (366)
Q Consensus 120 lV~F~a~wC~~Ck~~~p~~e~la~~~~ 146 (366)
++.||++||++|+++.+.+++++..+.
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~~~ 29 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNERD 29 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHHHS
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhcCC
Confidence 678999999999999999999988764
No 227
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=98.55 E-value=1.7e-07 Score=84.69 Aligned_cols=43 Identities=14% Similarity=0.064 Sum_probs=38.8
Q ss_pred cCCeEEEEEECCCChhhhcccHHHHHHHHHHhcc-ccEEEeeccC
Q psy1110 115 EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQ-RAYYGMGMLR 158 (366)
Q Consensus 115 ~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~-v~~~~v~~~~ 158 (366)
.+++++|.|||+||++| ...|.+.+++++|.+. +.++.|+++.
T Consensus 37 kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~~g~~vlgvs~d~ 80 (207)
T 2r37_A 37 AGKYVLFVNVASYGGLT-GQYIELNALQEELAPFGLVILGFPCNQ 80 (207)
T ss_dssp TTSEEEEEEECSSSTTT-THHHHHHHHHHHHGGGTEEEEEEECCC
T ss_pred CCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhccCCEEEEEEECcc
Confidence 67999999999999999 6889999999999876 8999999863
No 228
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=98.54 E-value=6.1e-08 Score=87.61 Aligned_cols=45 Identities=7% Similarity=0.145 Sum_probs=40.1
Q ss_pred cCCeEEEEEE-CCCChhhhcccHHHHHHHHHHhcc-ccEEEeeccCC
Q psy1110 115 EESSVLVMFY-APWCGHCKKLKPEYEEAAATMKQQ-RAYYGMGMLRH 159 (366)
Q Consensus 115 ~~k~vlV~F~-a~wC~~Ck~~~p~~e~la~~~~~~-v~~~~v~~~~~ 159 (366)
.+++++|.|| ++||++|....|.+.+++++|.+. +.++.|+++..
T Consensus 47 ~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~~~~v~vv~Is~D~~ 93 (211)
T 2pn8_A 47 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQ 93 (211)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHTTTEEEEEEESSCH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCH
Confidence 4789999999 999999999999999999999764 89999998643
No 229
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=98.53 E-value=6.5e-08 Score=85.41 Aligned_cols=44 Identities=9% Similarity=0.098 Sum_probs=39.1
Q ss_pred cCCeEEEEEEC-CCChhhhcccHHHHHHHHHHhcc-ccEEEeeccC
Q psy1110 115 EESSVLVMFYA-PWCGHCKKLKPEYEEAAATMKQQ-RAYYGMGMLR 158 (366)
Q Consensus 115 ~~k~vlV~F~a-~wC~~Ck~~~p~~e~la~~~~~~-v~~~~v~~~~ 158 (366)
.+++++|.||+ +||++|....|.+.+++++|.+. +.++.|+++.
T Consensus 29 ~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~~~v~vv~Is~d~ 74 (186)
T 1n8j_A 29 EGRWSVFFFYPADFTFVSPTELGDVADHYEELQKLGVDVYSVSTDT 74 (186)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHHTTEEEEEEESSC
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 46899999995 99999999999999999999764 8899998864
No 230
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=98.53 E-value=1.7e-07 Score=80.67 Aligned_cols=44 Identities=16% Similarity=0.274 Sum_probs=39.0
Q ss_pred cCCeEEEEEE-CCCChhhh-cccHHHHHHHHHHhcc-cc-EEEeeccC
Q psy1110 115 EESSVLVMFY-APWCGHCK-KLKPEYEEAAATMKQQ-RA-YYGMGMLR 158 (366)
Q Consensus 115 ~~k~vlV~F~-a~wC~~Ck-~~~p~~e~la~~~~~~-v~-~~~v~~~~ 158 (366)
.+++++|.|| ++||++|. ...|.+.+++++|++. +. ++.|+.+.
T Consensus 34 ~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~~~v~~vv~Is~d~ 81 (162)
T 1tp9_A 34 AGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKSKGVTEILCISVND 81 (162)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCCEEEEESSC
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCC
Confidence 5789999999 89999999 8999999999999754 88 99998764
No 231
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=98.48 E-value=8.5e-08 Score=86.92 Aligned_cols=42 Identities=17% Similarity=0.422 Sum_probs=33.1
Q ss_pred cccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhC
Q psy1110 275 VTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRD 320 (366)
Q Consensus 275 ~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~ 320 (366)
...+..++..++|+++||+ ++.+|. ...|..+.+.|.++|.+
T Consensus 167 v~~~~~l~~~~gV~gtPt~-v~~dG~---~~~G~~~~~~l~~~l~~ 208 (216)
T 1eej_A 167 IADHYALGVQLGVSGTPAV-VLSNGT---LVPGYQPPKEMKEFLDE 208 (216)
T ss_dssp HHHHHHHHHHHTCCSSSEE-ECTTSC---EEESCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCccCEE-EEcCCe---EecCCCCHHHHHHHHHH
Confidence 3456678899999999999 467785 45688888998888864
No 232
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=98.47 E-value=9.8e-08 Score=83.66 Aligned_cols=45 Identities=11% Similarity=0.087 Sum_probs=39.7
Q ss_pred cCCeEEEEEE-CCCChhhhcccHHHHHHHHHHhcc-ccEEEeeccCC
Q psy1110 115 EESSVLVMFY-APWCGHCKKLKPEYEEAAATMKQQ-RAYYGMGMLRH 159 (366)
Q Consensus 115 ~~k~vlV~F~-a~wC~~Ck~~~p~~e~la~~~~~~-v~~~~v~~~~~ 159 (366)
.+++++|.|| ++||++|....|.+.+++++|.+. +.++.|+++..
T Consensus 50 ~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~Vs~D~~ 96 (179)
T 3ixr_A 50 TNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLGVSRDSV 96 (179)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESCCH
T ss_pred CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCCCH
Confidence 4678999998 999999999999999999999876 88888888653
No 233
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=98.40 E-value=2.1e-07 Score=85.88 Aligned_cols=46 Identities=7% Similarity=0.138 Sum_probs=40.9
Q ss_pred cCCeEEEEEEC-CCChhhhcccHHHHHHHHHHhcc-ccEEEeeccCCc
Q psy1110 115 EESSVLVMFYA-PWCGHCKKLKPEYEEAAATMKQQ-RAYYGMGMLRHR 160 (366)
Q Consensus 115 ~~k~vlV~F~a-~wC~~Ck~~~p~~e~la~~~~~~-v~~~~v~~~~~~ 160 (366)
.+++++|.||+ +||++|....|.+.+++++|++. +.++.|+++...
T Consensus 76 ~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~~~gv~vv~Is~D~~~ 123 (240)
T 3qpm_A 76 RGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFRAINTEVVACSVDSQF 123 (240)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHTTTEEEEEEESSCHH
T ss_pred CCCEEEEEEECCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEECCCHH
Confidence 57899999999 99999999999999999999865 889999887543
No 234
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=98.37 E-value=7.4e-08 Score=83.58 Aligned_cols=49 Identities=12% Similarity=0.310 Sum_probs=41.5
Q ss_pred hhhccCCeEEEEEE-CCCChhhhcccHHHHHHHHHHhcc-ccEEEeeccCC
Q psy1110 111 LVIQEESSVLVMFY-APWCGHCKKLKPEYEEAAATMKQQ-RAYYGMGMLRH 159 (366)
Q Consensus 111 ~~i~~~k~vlV~F~-a~wC~~Ck~~~p~~e~la~~~~~~-v~~~~v~~~~~ 159 (366)
++..+++++++.|| ++||++|....|.+.+++++|++. +.++.|+.+..
T Consensus 28 d~~~~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~~~~~v~vv~is~d~~ 78 (164)
T 4gqc_A 28 EVLKRGRPAVLIFFPAAFSPVCTKELCTFRDKMAQLEKANAEVLAISVDSP 78 (164)
T ss_dssp HHHHTSSCEEEEECSCTTCCEECSSCEESCCCGGGGGGSSSEEEEEESSCH
T ss_pred HHhcCCCEEEEEEeCCCCCCCcccchhhhhhhHHHhhccCceEEEecCCCH
Confidence 45556888999998 999999999999999999999876 88888887643
No 235
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=98.36 E-value=3.7e-07 Score=82.52 Aligned_cols=43 Identities=21% Similarity=0.444 Sum_probs=35.5
Q ss_pred cccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCC
Q psy1110 275 VTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDP 321 (366)
Q Consensus 275 ~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~ 321 (366)
..++..++.+++|++.||+++ .+|+ ...|..+.+.|.++|.+.
T Consensus 167 v~~~~~l~~~~gV~gTPt~vi-~nG~---~~~G~~~~~~l~~~l~~~ 209 (211)
T 1t3b_A 167 VKKHYELGIQFGVRGTPSIVT-STGE---LIGGYLKPADLLRALEET 209 (211)
T ss_dssp HHHHHHHHHHHTCCSSCEEEC-TTSC---CCCSCCCHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCCcCCEEEE-eCCE---EecCCCCHHHHHHHHHhc
Confidence 345667889999999999998 7887 567888999999998754
No 236
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=98.32 E-value=7.1e-07 Score=77.26 Aligned_cols=40 Identities=15% Similarity=0.189 Sum_probs=33.1
Q ss_pred cCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEee
Q psy1110 115 EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMG 155 (366)
Q Consensus 115 ~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~ 155 (366)
.++++++.||.+||++|+.+.|.++++.+++.+ +.+...+
T Consensus 21 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~-v~~~~~~ 60 (175)
T 3gyk_A 21 EGDVTVVEFFDYNCPYCRRAMAEVQGLVDADPN-VRLVYRE 60 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHCTT-EEEEEEE
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHhCCC-EEEEEEe
Confidence 367899999999999999999999999988765 4454444
No 237
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=98.31 E-value=3.5e-07 Score=85.22 Aligned_cols=109 Identities=13% Similarity=0.097 Sum_probs=81.6
Q ss_pred chHHHhhcC-CCCeEEEEeeecc---cCCcchhccCCcc----ceEEeeecCee--eEee--cCCccHHHHHHHHhCcCC
Q psy1110 15 SPLAKEIVK-PKAITLGLIERLT---EKADPVCTREKAK----KKVRRQKNAEV--KYVY--ENGNTKDKIIEFVRNPQA 82 (366)
Q Consensus 15 ~~la~e~~~-~~~I~~~~Vdc~~---~~~~~lc~~~~I~----Pti~~f~~g~~--~~~y--~g~r~~~~i~~fi~~~~~ 82 (366)
..||+++.. ...|.|++|||+. +.+.++|.+++|+ |||.+|+ |.. ...| .|.|+.++|.+|+.+...
T Consensus 54 e~lA~~~~~~~~~v~~akVD~d~~g~~~n~~la~~~~V~~~~~PTl~~F~-G~~~~~~~y~~~G~~~~~~L~~fi~~~~~ 132 (248)
T 2c0g_A 54 TAFSKSAHKATKDLLIATVGVKDYGELENKALGDRYKVDDKNFPSIFLFK-GNADEYVQLPSHVDVTLDNLKAFVSANTP 132 (248)
T ss_dssp HHHHHHHHHHCSSEEEEEEEECSSTTCTTHHHHHHTTCCTTSCCEEEEES-SSSSSEEECCTTSCCCHHHHHHHHHHHSS
T ss_pred HHHHHHHhccCCCeEEEEEECCcccccccHHHHHHhCCCcCCCCeEEEEe-CCcCcceeecccCCCCHHHHHHHHHHhhc
Confidence 367888764 4689999999976 1145999999998 9999999 863 5789 899999999999987655
Q ss_pred cchhhhccCCCcCCCCCceEEecchhhhhhhccCCeEEEEEECCCChhhhcccHHHHHHHHHHh
Q psy1110 83 TSEEVKKKEQDWADTESEVVHLTDDNFDLVIQEESSVLVMFYAPWCGHCKKLKPEYEEAAATMK 146 (366)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~i~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~ 146 (366)
.. ....+. -..++.++.+ |.+.||+.|.++....+++++.+.
T Consensus 133 ~~----------~~~~g~-----i~~~d~l~~~-------f~~~~~~~~~~~~~~~~~~~~~l~ 174 (248)
T 2c0g_A 133 LY----------IGRDGC-----IKEFNEVLKN-------YANIPDAEQLKLIEKLQAKQEQLT 174 (248)
T ss_dssp CC----------CCCTTC-----CHHHHHHHTT-------GGGSCHHHHHHHHHHHHHHHHHCC
T ss_pred cc----------cCCCCc-----hHHHHHHHHH-------HhcccchhHHHHHHHHHHHHHHcc
Confidence 31 011111 1445555543 788999999999999998877763
No 238
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=98.30 E-value=3.7e-07 Score=80.98 Aligned_cols=44 Identities=14% Similarity=0.124 Sum_probs=36.3
Q ss_pred CC-eEEEEEECCCChhhhc-ccHHHHHHHHHHhcc-cc-EEEeeccCC
Q psy1110 116 ES-SVLVMFYAPWCGHCKK-LKPEYEEAAATMKQQ-RA-YYGMGMLRH 159 (366)
Q Consensus 116 ~k-~vlV~F~a~wC~~Ck~-~~p~~e~la~~~~~~-v~-~~~v~~~~~ 159 (366)
++ .+|+.||++||++|.. ..|.+.+++++|++. +. ++.|++++.
T Consensus 56 Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~~ 103 (184)
T 3uma_A 56 GKRVVLFAVPGAFTPTCSLNHLPGYLENRDAILARGVDDIAVVAVNDL 103 (184)
T ss_dssp TSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSCH
T ss_pred CCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHHHcCCCEEEEEECCCH
Confidence 45 4555667999999999 699999999999866 78 999998753
No 239
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=98.30 E-value=1.7e-06 Score=75.21 Aligned_cols=59 Identities=8% Similarity=0.149 Sum_probs=44.4
Q ss_pred CCCCCceEEecchhhhhhhccCCeEEEEEECCCCh-hhhcccHHHHHHHHHHhc---cccEEEeeccCCc
Q psy1110 95 ADTESEVVHLTDDNFDLVIQEESSVLVMFYAPWCG-HCKKLKPEYEEAAATMKQ---QRAYYGMGMLRHR 160 (366)
Q Consensus 95 ~~~~~~v~~l~~~~~~~~i~~~k~vlV~F~a~wC~-~Ck~~~p~~e~la~~~~~---~v~~~~v~~~~~~ 160 (366)
.+..+..+.|++. .+++++|+||++||+ .|....+.+.++.+.+.. ++.++.|++|-.+
T Consensus 18 ~d~~G~~v~l~d~-------~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~~~~~v~~v~isvDp~~ 80 (170)
T 4hde_A 18 TNQDGKPFGTKDL-------KGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDPDL 80 (170)
T ss_dssp ECTTSCEEEHHHH-------TTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTTT
T ss_pred ECCCCCEEeHHHh-------CCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhcccccceeEeeecCccc
Confidence 3444555444432 689999999999995 899999999999888754 3888888887443
No 240
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=98.28 E-value=3.8e-07 Score=79.55 Aligned_cols=49 Identities=12% Similarity=0.264 Sum_probs=39.9
Q ss_pred hhhccCCeEEEEEECCCChhhhcc-cHHHHHHHHHHhcc-cc-EEEeeccCC
Q psy1110 111 LVIQEESSVLVMFYAPWCGHCKKL-KPEYEEAAATMKQQ-RA-YYGMGMLRH 159 (366)
Q Consensus 111 ~~i~~~k~vlV~F~a~wC~~Ck~~-~p~~e~la~~~~~~-v~-~~~v~~~~~ 159 (366)
++..+.+.+|+.||++||++|... .|.+.+++++|++. +. ++.|+.++.
T Consensus 39 ~~~~gk~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~~g~~~vv~Is~d~~ 90 (171)
T 2pwj_A 39 DIFKDKKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKAKGVDSVICVAINDP 90 (171)
T ss_dssp HHHTTSEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHHTTCSEEEEEESSCH
T ss_pred HHhCCCCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCH
Confidence 333444577888999999999998 99999999999765 88 999998753
No 241
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=98.27 E-value=4.4e-07 Score=84.61 Aligned_cols=46 Identities=7% Similarity=0.119 Sum_probs=40.7
Q ss_pred cCCeEEEEEE-CCCChhhhcccHHHHHHHHHHhcc-ccEEEeeccCCc
Q psy1110 115 EESSVLVMFY-APWCGHCKKLKPEYEEAAATMKQQ-RAYYGMGMLRHR 160 (366)
Q Consensus 115 ~~k~vlV~F~-a~wC~~Ck~~~p~~e~la~~~~~~-v~~~~v~~~~~~ 160 (366)
.+++++|.|| ++||++|....|.+.+++++|++. +.++.|++|...
T Consensus 90 kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~~~gv~vv~IS~D~~~ 137 (254)
T 3tjj_A 90 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFRSINTEVVACSVDSQF 137 (254)
T ss_dssp TTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHHTTTEEEEEEESSCHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHHHcCCEEEEEcCCCHH
Confidence 4789999999 999999999999999999999865 889999987543
No 242
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=98.25 E-value=4.7e-07 Score=78.82 Aligned_cols=44 Identities=16% Similarity=0.144 Sum_probs=37.9
Q ss_pred cCCeEEEEEE-CCCChhhhc-ccHHHHHHHHHHhcc-c-cEEEeeccC
Q psy1110 115 EESSVLVMFY-APWCGHCKK-LKPEYEEAAATMKQQ-R-AYYGMGMLR 158 (366)
Q Consensus 115 ~~k~vlV~F~-a~wC~~Ck~-~~p~~e~la~~~~~~-v-~~~~v~~~~ 158 (366)
.+++++|.|| ++||++|.. ..|.+.+++++|++. + .++.|+.+.
T Consensus 30 ~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~~gv~~vv~Is~d~ 77 (167)
T 2wfc_A 30 AGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHGKGVDIIACMAVND 77 (167)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHHTTCCEEEEEESSC
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEeCCC
Confidence 4577888886 999999999 999999999999765 8 899999864
No 243
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=98.24 E-value=1.6e-06 Score=76.45 Aligned_cols=44 Identities=23% Similarity=0.322 Sum_probs=39.2
Q ss_pred cCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccC
Q psy1110 115 EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLR 158 (366)
Q Consensus 115 ~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~ 158 (366)
+++++++.||++||++|+.+.|.++++.+.+.+++.|..+++.-
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~~~~~ 67 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAPQDVVLKQVPIAF 67 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEEEECCS
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCCCCeEEEEEeccc
Confidence 46889999999999999999999999999998888888887653
No 244
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=98.21 E-value=4.5e-06 Score=69.47 Aligned_cols=46 Identities=13% Similarity=0.047 Sum_probs=38.3
Q ss_pred CceEEec-chhhhhhhccCCeEEEEEECCCChhhhcccHHHHHHHHHHhcc
Q psy1110 99 SEVVHLT-DDNFDLVIQEESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQ 148 (366)
Q Consensus 99 ~~v~~l~-~~~~~~~i~~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~ 148 (366)
+.+..|+ .++++.+++++..++|-||++||++| .+.|.++|+.+ +.
T Consensus 21 ~~~~~i~s~~e~e~fi~~~~v~VVGfF~~~~~~~---~~~F~~~A~~~-~d 67 (124)
T 2l4c_A 21 QEPTWLTDVPAAMEFIAATEVAVIGFFQDLEIPA---VPILHSMVQKF-PG 67 (124)
T ss_dssp CCCEECCSHHHHHHHHHTSSEEEEEECSCTTSTH---HHHHHHHHHHC-TT
T ss_pred CcceEcCCHHHHHHHHhcCCCEEEEEECCCCChh---HHHHHHHHHhC-CC
Confidence 3455564 47889999889999999999999988 67899999988 55
No 245
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=98.20 E-value=1.4e-06 Score=76.82 Aligned_cols=42 Identities=12% Similarity=0.227 Sum_probs=36.6
Q ss_pred cCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeec
Q psy1110 115 EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGM 156 (366)
Q Consensus 115 ~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~ 156 (366)
.++++++.||.+||++|..+.|.++++.+++.+.+.|..+.+
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~ 65 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLPADVHFVRLPA 65 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCCTTEEEEEEEC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCCCCeEEEEEeh
Confidence 468899999999999999999999999999988776666654
No 246
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=98.11 E-value=2.6e-06 Score=69.66 Aligned_cols=62 Identities=13% Similarity=0.115 Sum_probs=50.8
Q ss_pred hHHHhhc---CCCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeee--EeecCCccHHHHHHHHhC
Q psy1110 16 PLAKEIV---KPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVK--YVYENGNTKDKIIEFVRN 79 (366)
Q Consensus 16 ~la~e~~---~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~--~~y~g~r~~~~i~~fi~~ 79 (366)
.||+++. ..+.|.+++|||.+ ..++|.+++|+ ||+.+|++|+.. ..|.|.++.++|.+|+.+
T Consensus 57 ~la~~~~~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~g~~~~~~~~~G~~~~~~l~~~i~~ 125 (127)
T 3h79_A 57 DLSMSQSQKRNHLTFVAARIDGEK--YPDVIERMRVSGFPTMRYYTRIDKQEPFEYSGQRYLSLVDSFVFQ 125 (127)
T ss_dssp HHHHHHHTSTTTTTEEEEEEETTT--CHHHHHHTTCCSSSEEEEECSSCSSSCEECCSCCCHHHHHHHHHH
T ss_pred HHHHHHHhcccCCCeEEEEEEccc--cHhHHHhcCCccCCEEEEEeCCCCCCceEecCCccHHHHHHHHHh
Confidence 4555543 23579999999966 55999999999 999999987653 689999999999999965
No 247
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=98.11 E-value=3e-06 Score=74.32 Aligned_cols=44 Identities=11% Similarity=0.186 Sum_probs=34.7
Q ss_pred cCCeEEE-EEECCCChhhh-cccHHHHHHHHHHhcc-ccEEE-eeccC
Q psy1110 115 EESSVLV-MFYAPWCGHCK-KLKPEYEEAAATMKQQ-RAYYG-MGMLR 158 (366)
Q Consensus 115 ~~k~vlV-~F~a~wC~~Ck-~~~p~~e~la~~~~~~-v~~~~-v~~~~ 158 (366)
.+++++| .||++||++|. ...|.+.+++++|+.. +.++. ++++.
T Consensus 42 ~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~~~gv~vv~~iS~D~ 89 (173)
T 3mng_A 42 KGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALKAKGVQVVACLSVND 89 (173)
T ss_dssp TTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTTCCEEEEEESSC
T ss_pred CCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEEcCCC
Confidence 3565555 45599999999 5899999999999866 78876 77765
No 248
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=98.11 E-value=2.1e-06 Score=64.70 Aligned_cols=21 Identities=19% Similarity=0.449 Sum_probs=18.7
Q ss_pred EEEEECCCChhhhcccHHHHH
Q psy1110 120 LVMFYAPWCGHCKKLKPEYEE 140 (366)
Q Consensus 120 lV~F~a~wC~~Ck~~~p~~e~ 140 (366)
++.||++||++|+++.+.+++
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~ 23 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMEN 23 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHH
T ss_pred EEEEcCCCChhHHHHHHHHHH
Confidence 577999999999999988876
No 249
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=98.10 E-value=2.8e-06 Score=79.12 Aligned_cols=51 Identities=12% Similarity=0.107 Sum_probs=41.3
Q ss_pred hhhhccCC-eEEEEEECCCChhhhcccHHHHHHHHHHhcc-ccEEEeeccCCc
Q psy1110 110 DLVIQEES-SVLVMFYAPWCGHCKKLKPEYEEAAATMKQQ-RAYYGMGMLRHR 160 (366)
Q Consensus 110 ~~~i~~~k-~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~-v~~~~v~~~~~~ 160 (366)
.+++..++ .+|+.||++||++|....+.+.+++++|.+. +.++.|++|...
T Consensus 27 ~d~l~~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~~gv~VI~VS~Ds~~ 79 (249)
T 3a2v_A 27 DHYVSQGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQRLGVDLIGLSVDSVF 79 (249)
T ss_dssp HHHHTTTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCHH
T ss_pred HHHhhCCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHhCCcEEEEEECCCHH
Confidence 44553455 4667899999999999999999999999875 999999987543
No 250
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=98.09 E-value=2.9e-06 Score=77.42 Aligned_cols=42 Identities=7% Similarity=0.068 Sum_probs=36.7
Q ss_pred eEEEEEECCCChhhhcccHHHHHHHHHHhcc-ccEEEeeccCC
Q psy1110 118 SVLVMFYAPWCGHCKKLKPEYEEAAATMKQQ-RAYYGMGMLRH 159 (366)
Q Consensus 118 ~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~-v~~~~v~~~~~ 159 (366)
.+|+.||++||++|....+.+.+++++|.+. ++++.|++|..
T Consensus 34 vvL~~~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~IS~D~~ 76 (224)
T 1prx_A 34 GILFSHPRDFTPVCTTELGRAAKLAPEFAKRNVKLIALSIDSV 76 (224)
T ss_dssp EEEEEESCSSCHHHHHHHHHHHHHHHHHHTTTEEEEEEESSCH
T ss_pred EEEEEECCCCCCCcHHHHHHHHHHHHHHHHCCCEEEEEcCCCH
Confidence 5666779999999999999999999999865 89999998754
No 251
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=98.08 E-value=3.2e-06 Score=77.90 Aligned_cols=47 Identities=17% Similarity=0.225 Sum_probs=36.2
Q ss_pred ccccccccccccccCCeEEEec-CCceeeecCCCCCHHHHHHHHhCCCC
Q psy1110 276 TREKSLGKRFDIKGFPTLKYFR-AGSVAFDAGHLRDASRLVEFMRDPTE 323 (366)
Q Consensus 276 ~~~~~l~~~~~I~~~Ptl~~fk-~G~~~~~~~g~~~~e~l~~fi~~~~~ 323 (366)
..+..+...++|+++||+++.. +|+. ....|..+.+.|.++|++...
T Consensus 186 ~~~~~l~~~~gv~gtPt~vi~~~~G~~-~~~~G~~~~~~L~~~l~~~~~ 233 (241)
T 1v58_A 186 SDNEKLMDDLGANVTPAIYYMSKENTL-QQAVGLPDQKTLNIIMGNKLQ 233 (241)
T ss_dssp HHHHHHHHHHTCCSSCEEEEEETTTEE-EEEESSCCHHHHHHHTTC---
T ss_pred HHHHHHHHHcCCCCCCEEEEECCCCCE-EEecCCCCHHHHHHHHHHHHH
Confidence 4456778899999999999985 5763 567899999999999987653
No 252
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=98.05 E-value=1.1e-06 Score=69.65 Aligned_cols=34 Identities=24% Similarity=0.418 Sum_probs=25.8
Q ss_pred hhhhhhhccCCeEEEEEECCCChhhhcccHHHHHHH
Q psy1110 107 DNFDLVIQEESSVLVMFYAPWCGHCKKLKPEYEEAA 142 (366)
Q Consensus 107 ~~~~~~i~~~k~vlV~F~a~wC~~Ck~~~p~~e~la 142 (366)
+.+++++++.. ++.|+++||++|+++.+.++++.
T Consensus 3 ~~~~~~i~~~~--v~~f~~~~C~~C~~~~~~L~~~~ 36 (105)
T 1kte_A 3 AFVNSKIQPGK--VVVFIKPTCPFCRKTQELLSQLP 36 (105)
T ss_dssp HHHHHHCCTTC--EEEEECSSCHHHHHHHHHHHHSC
T ss_pred hHHHhhcccCC--EEEEEcCCCHhHHHHHHHHHHcC
Confidence 34566665543 66799999999999999988754
No 253
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=98.04 E-value=4.6e-06 Score=69.38 Aligned_cols=78 Identities=19% Similarity=0.191 Sum_probs=64.0
Q ss_pred hHHHhhcCCCCeEEEEeeecccCCcchhccCCcc----ceEEeeec-CeeeEeec--CCccHHHHHHHHhCcCCcchhhh
Q psy1110 16 PLAKEIVKPKAITLGLIERLTEKADPVCTREKAK----KKVRRQKN-AEVKYVYE--NGNTKDKIIEFVRNPQATSEEVK 88 (366)
Q Consensus 16 ~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~----Pti~~f~~-g~~~~~y~--g~r~~~~i~~fi~~~~~~~~~~~ 88 (366)
.+|+++. ++++|++||.++ +.+++.++||+ ||+.+|++ ++.++.+. |..+.++|.+|+.+...+++.|.
T Consensus 46 ~~A~~~~--gk~~f~~vd~d~--~~~~a~~~gi~~~~iPtl~i~~~~~g~~~~~~~~g~~~~~~l~~fi~~~l~Gkl~p~ 121 (133)
T 2djk_A 46 PIAEAQR--GVINFGTIDAKA--FGAHAGNLNLKTDKFPAFAIQEVAKNQKFPFDQEKEITFEAIKAFVDDFVAGKIEPS 121 (133)
T ss_dssp HHHHSST--TTSEEEEECTTT--TGGGTTTTTCCSSSSSEEEEECTTTCCBCCCCSSSCCCHHHHHHHHHHHHHTCCCCS
T ss_pred HHHHHhC--CeEEEEEEchHH--hHHHHHHcCCCcccCCEEEEEecCcCcccCCCCccccCHHHHHHHHHHHHcCCcCcc
Confidence 4566665 789999999965 55899999998 99999996 33345654 89999999999999999999999
Q ss_pred ccCCCcCCC
Q psy1110 89 KKEQDWADT 97 (366)
Q Consensus 89 ~~~~~~~~~ 97 (366)
.+++++|..
T Consensus 122 ~kSe~iP~~ 130 (133)
T 2djk_A 122 IKSEPIPEK 130 (133)
T ss_dssp SCCCCCCTT
T ss_pred ccCCCCCCc
Confidence 999888653
No 254
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=98.04 E-value=5.1e-06 Score=61.22 Aligned_cols=22 Identities=23% Similarity=0.603 Sum_probs=19.0
Q ss_pred EEEEECCCChhhhcccHHHHHH
Q psy1110 120 LVMFYAPWCGHCKKLKPEYEEA 141 (366)
Q Consensus 120 lV~F~a~wC~~Ck~~~p~~e~l 141 (366)
++.|+++||++|+++.+.++++
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~ 24 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA 24 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT
T ss_pred EEEEeCCCChHHHHHHHHHHHc
Confidence 5779999999999999888764
No 255
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=98.01 E-value=2.4e-06 Score=72.68 Aligned_cols=73 Identities=11% Similarity=0.075 Sum_probs=61.1
Q ss_pred cCCCCCCchHHHhhcCC--CC-eEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCcCC
Q psy1110 8 TLNKEDTSPLAKEIVKP--KA-ITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNPQA 82 (366)
Q Consensus 8 ~~~~~~~~~la~e~~~~--~~-I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~~~ 82 (366)
+-.+.+.+|+-.++++. ++ ++|++||.+++. +++.+|||+ ||+.+|++|+......|-++.+.|.+++.+...
T Consensus 48 CgpCk~iaPvleela~e~~g~~v~~~KVdvDe~~--~lA~~ygV~sIPTlilFk~G~~v~~~~G~~~k~~l~~~i~~~l~ 125 (140)
T 2qgv_A 48 TPEVSDNPVMIGELLHEFPDYTWQVAIADLEQSE--AIGDRFGAFRFPATLVFTGGNYRGVLNGIHPWAELINLMRGLVE 125 (140)
T ss_dssp CTTTTHHHHHHHHHHTTCTTSCCEEEECCHHHHH--HHHHHHTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred CCcHHHHHhHHHHHHHHcCCCeEEEEEEECCCCH--HHHHHcCCccCCEEEEEECCEEEEEEecCCCHHHHHHHHHHHhc
Confidence 44555666766666654 57 999999997755 999999999 999999999999999999999999999987654
No 256
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=98.00 E-value=2.6e-06 Score=78.38 Aligned_cols=44 Identities=5% Similarity=-0.087 Sum_probs=38.5
Q ss_pred CCeEEEEEE-CCCChhhhcccHHHHHHHHHHhcc-ccEEEeeccCC
Q psy1110 116 ESSVLVMFY-APWCGHCKKLKPEYEEAAATMKQQ-RAYYGMGMLRH 159 (366)
Q Consensus 116 ~k~vlV~F~-a~wC~~Ck~~~p~~e~la~~~~~~-v~~~~v~~~~~ 159 (366)
++.++|.|| ++||+.|....+.+.+++++|.+. ++++.|++|..
T Consensus 29 k~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~~~v~vigIS~D~~ 74 (233)
T 2v2g_A 29 NSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKKRGVKLIALSCDNV 74 (233)
T ss_dssp SSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHHTTEEEEEEESSCH
T ss_pred CCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHHcCCEEEEEcCCCH
Confidence 348889998 999999999999999999999765 89999998753
No 257
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=97.95 E-value=9.9e-06 Score=63.70 Aligned_cols=63 Identities=11% Similarity=0.206 Sum_probs=51.9
Q ss_pred hHHHhhcCC-CCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCc
Q psy1110 16 PLAKEIVKP-KAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNP 80 (366)
Q Consensus 16 ~la~e~~~~-~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~ 80 (366)
.+++++... ..+.++.|||.. ..++|.+++|+ ||+.+|++|.....|.|.++.++|.+|+.+.
T Consensus 45 ~~~~~~~~~~~~~~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~l~~~ 110 (111)
T 3uvt_A 45 ELSKKEFPGLAGVKIAEVDCTA--ERNICSKYSVRGYPTLLLFRGGKKVSEHSGGRDLDSLHRFVLSQ 110 (111)
T ss_dssp HHHTCCCCC-CCEEEEEEETTT--CHHHHHHTTCCSSSEEEEEETTEEEEEECSCCSHHHHHHHHHHH
T ss_pred HHHHHhhccCCceEEEEEeccc--cHhHHHhcCCCcccEEEEEeCCcEEEeccCCcCHHHHHHHHHhc
Confidence 344443322 479999999965 55999999999 9999999998888999999999999999753
No 258
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=97.94 E-value=8.2e-06 Score=69.15 Aligned_cols=67 Identities=7% Similarity=0.017 Sum_probs=55.7
Q ss_pred CCchHHHhhcCC--CCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCcC
Q psy1110 13 DTSPLAKEIVKP--KAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNPQ 81 (366)
Q Consensus 13 ~~~~la~e~~~~--~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~~ 81 (366)
+.+|+-.++++. ++++|++||.+++. +++.+|||+ ||+.+|++|+......|-++.+.|.+++....
T Consensus 52 ~iaPvleela~e~~~~v~~~KVdvDe~~--~la~~ygV~siPTlilFkdG~~v~~~vG~~~k~~l~~~l~~~l 122 (137)
T 2qsi_A 52 DLAVVLPELINAFPGRLVAAEVAAEAER--GLMARFGVAVCPSLAVVQPERTLGVIAKIQDWSSYLAQIGAML 122 (137)
T ss_dssp HHHHHHHHHHHTSTTTEEEEEECGGGHH--HHHHHHTCCSSSEEEEEECCEEEEEEESCCCHHHHHHHHHHHH
T ss_pred hHHhHHHHHHHHccCCcEEEEEECCCCH--HHHHHcCCccCCEEEEEECCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 344554454432 68999999997755 999999999 99999999999999999999999999997655
No 259
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=97.90 E-value=2.5e-05 Score=62.25 Aligned_cols=64 Identities=14% Similarity=0.087 Sum_probs=55.1
Q ss_pred hHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCcCCc
Q psy1110 16 PLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNPQAT 83 (366)
Q Consensus 16 ~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~~~~ 83 (366)
.+++++. +++.+..|||+.+. ++|.+++|+ ||+.+|++|.....|.|.++.++|.+|+.+....
T Consensus 41 ~~~~~~~--~~v~~~~vd~~~~~--~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~~~~ 106 (112)
T 2voc_A 41 ELDQEMG--DKLKIVKIDVDENQ--ETAGKYGVMSIPTLLVLKDGEVVETSVGFKPKEALQELVNKHLLE 106 (112)
T ss_dssp HHHHHHT--TTCEEEEEETTTCC--SHHHHTTCCSBSEEEEEETTEEEEEEESCCCHHHHHHHHHTTSCS
T ss_pred HHHHHhC--CCcEEEEEECCCCH--HHHHHcCCCcccEEEEEeCCEEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 4566665 57999999996644 999999999 9999999898888899999999999999887765
No 260
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=97.89 E-value=4.3e-06 Score=76.06 Aligned_cols=42 Identities=10% Similarity=0.105 Sum_probs=36.1
Q ss_pred eEEEEEECCCChhhhcccHHHHHHHHHHhcc-ccEEEeeccCC
Q psy1110 118 SVLVMFYAPWCGHCKKLKPEYEEAAATMKQQ-RAYYGMGMLRH 159 (366)
Q Consensus 118 ~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~-v~~~~v~~~~~ 159 (366)
.+|+.||++||+.|....+.+.+++++|++. ++++.|++|..
T Consensus 34 vvL~f~~a~~cp~C~~el~~l~~l~~~f~~~~v~vi~vS~D~~ 76 (220)
T 1xcc_A 34 AILFSHPNDFTPVCTTELAELGKMHEDFLKLNCKLIGFSCNSK 76 (220)
T ss_dssp EEEECCSCTTCHHHHHHHHHHHHTHHHHHTTTEEEEEEESSCH
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCCH
Confidence 5555668999999999999999999999875 89999998753
No 261
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=97.89 E-value=1.2e-05 Score=69.50 Aligned_cols=41 Identities=17% Similarity=0.447 Sum_probs=34.9
Q ss_pred cCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEee
Q psy1110 115 EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMG 155 (366)
Q Consensus 115 ~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~ 155 (366)
.+++++|.|+.-.|+||+++.+.+.++.+++.+.+.+..++
T Consensus 20 ~~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~~~~~~~~~ 60 (184)
T 4dvc_A 20 SSSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPEGAKFQKNH 60 (184)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred CCCCEEEEEECCCCHhHHHHhHHHHHHHhhcCCceEEEEEe
Confidence 36789999999999999999999999999988776665544
No 262
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=97.88 E-value=1.5e-05 Score=63.81 Aligned_cols=53 Identities=11% Similarity=0.137 Sum_probs=46.5
Q ss_pred CCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCc
Q psy1110 25 KAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNP 80 (366)
Q Consensus 25 ~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~ 80 (366)
+++.+++|||++ +.++|.++||+ ||+.+|++|.....+.| ++.++|.+|+.++
T Consensus 50 ~~~~~~~vd~d~--~~~l~~~~~V~~~PT~~~~~~G~~v~~~~G-~~~~~l~~~i~k~ 104 (105)
T 3zzx_A 50 SDVVFLKVDVDE--CEDIAQDNQIACMPTFLFMKNGQKLDSLSG-ANYDKLLELVEKN 104 (105)
T ss_dssp TTEEEEEEETTT--CHHHHHHTTCCBSSEEEEEETTEEEEEEES-CCHHHHHHHHHHH
T ss_pred CCeEEEEEeccc--CHHHHHHcCCCeecEEEEEECCEEEEEEeC-cCHHHHHHHHHhc
Confidence 469999999965 55999999999 99999999988888888 6889999999753
No 263
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=97.85 E-value=1.4e-05 Score=63.02 Aligned_cols=62 Identities=11% Similarity=0.105 Sum_probs=52.6
Q ss_pred chHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCc
Q psy1110 15 SPLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNP 80 (366)
Q Consensus 15 ~~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~ 80 (366)
..+++++. +++.++.|||.. ..++|.+++|+ ||+.+|++|.....|.|.++.+.|.+|+.+.
T Consensus 45 ~~~~~~~~--~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~l~~~ 108 (111)
T 3gnj_A 45 EELRLNYE--ESFGFYYVDVEE--EKTLFQRFSLKGVPQILYFKDGEYKGKMAGDVEDDEVEQMIADV 108 (111)
T ss_dssp HHHHHHTT--TTSEEEEEETTT--CHHHHHHTTCCSSCEEEEEETTEEEEEEESSCCHHHHHHHHHHH
T ss_pred HHHHHHcC--CceEEEEEECCc--ChhHHHhcCCCcCCEEEEEECCEEEEEEeccCCHHHHHHHHHHH
Confidence 34555554 579999999965 55999999999 9999999998888999999999999999764
No 264
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=97.85 E-value=5.4e-06 Score=72.90 Aligned_cols=42 Identities=12% Similarity=0.319 Sum_probs=36.9
Q ss_pred CCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeecc
Q psy1110 116 ESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGML 157 (366)
Q Consensus 116 ~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~ 157 (366)
++++++.||.+||++|..+.|.+.++.+++..++.+..+.+.
T Consensus 22 ~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~~ 63 (195)
T 2znm_A 22 GKIEVLEFFGYFCVHCHHFDPLLLKLGKALPSDAYLRTEHVV 63 (195)
T ss_dssp SSEEEEEEECTTSCCTTSSCHHHHHHHHHSCTTEEEEEEECC
T ss_pred CCcEEEEEECCCChhHHHHhHHHHHHHHHCCCceEEEEeccc
Confidence 678899999999999999999999999998777777777653
No 265
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=97.83 E-value=2.3e-05 Score=71.80 Aligned_cols=40 Identities=3% Similarity=-0.018 Sum_probs=32.5
Q ss_pred cCCeEEEEEECCC-Chhhh-----cccHHHHHHHHHHhccccEEEeeccC
Q psy1110 115 EESSVLVMFYAPW-CGHCK-----KLKPEYEEAAATMKQQRAYYGMGMLR 158 (366)
Q Consensus 115 ~~k~vlV~F~a~w-C~~Ck-----~~~p~~e~la~~~~~~v~~~~v~~~~ 158 (366)
.+++++|.||+.| |+.|. ...+.|.++ | ..+.++.|+++.
T Consensus 47 ~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~---~-~gv~VvgIS~Ds 92 (224)
T 3keb_A 47 SHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS---W-PHLKLIVITVDS 92 (224)
T ss_dssp TTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT---C-TTSEEEEEESSC
T ss_pred CCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH---c-CCCEEEEEECCC
Confidence 5788999999998 99999 777777666 5 557888888764
No 266
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=97.82 E-value=2.6e-05 Score=63.77 Aligned_cols=70 Identities=16% Similarity=0.146 Sum_probs=52.8
Q ss_pred CCCCCchHHHhhcCC--CCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCcC
Q psy1110 10 NKEDTSPLAKEIVKP--KAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNPQ 81 (366)
Q Consensus 10 ~~~~~~~la~e~~~~--~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~~ 81 (366)
.+....|...++++. +.+.++.|||+.+. ++|.++||+ ||+.+|++|.....+.|.++.++|.+|+.+.+
T Consensus 49 ~C~~~~p~~~~l~~~~~~~~~~~~vd~d~~~--~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 122 (123)
T 1oaz_A 49 PCKMIAPILDEIADEYQGKLTVAKLNIDQNP--GTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANL 122 (123)
T ss_dssp CCCTTHHHHTTC-------CEEEEEETTSCT--TTGGGGTCCBSSEEEEEESSSEEEEEESCCCHHHHHHHHTTTC
T ss_pred CcHHHHHHHHHHHHHhcCCeEEEEEECCCCH--HHHHHcCCCccCEEEEEECCEEEEEEeCCCCHHHHHHHHHHHh
Confidence 344444444444432 46999999996654 999999999 99999998988888999999999999997643
No 267
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=97.82 E-value=1.1e-05 Score=67.27 Aligned_cols=68 Identities=15% Similarity=0.034 Sum_probs=57.4
Q ss_pred chHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCcCCcchh
Q psy1110 15 SPLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNPQATSEE 86 (366)
Q Consensus 15 ~~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~~~~~~~ 86 (366)
..+++++. +.+.|+.|||.. ..++|.+++|+ ||+.+|++|.....|.|.++.+.|.+|+.+.......
T Consensus 47 ~~l~~~~~--~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~~~~ 116 (140)
T 3hz4_A 47 EEYAKEYG--SSAVFGRINIAT--NPWTAEKYGVQGTPTFKFFCHGRPVWEQVGQIYPSILKNAVRDMLQHGEE 116 (140)
T ss_dssp HHHHHHHT--TTSEEEEEETTT--CHHHHHHHTCCEESEEEEEETTEEEEEEESSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhC--CceEEEEEECCc--CHhHHHHCCCCcCCEEEEEeCCcEEEEEcCCCCHHHHHHHHHHHhccccc
Confidence 45666666 569999999965 55999999999 9999999998888999999999999999887765333
No 268
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=97.81 E-value=2.2e-05 Score=66.50 Aligned_cols=80 Identities=13% Similarity=0.019 Sum_probs=53.7
Q ss_pred CCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCcCCcchhhhccCCCcCCCCCceE
Q psy1110 25 KAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNPQATSEEVKKKEQDWADTESEVV 102 (366)
Q Consensus 25 ~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~~~~~~~~~~~~~~~~~~~~~v~ 102 (366)
++|.|+.|||.. ..++|.+++|+ ||+.+|++|.....+.| .+.+.|.+|+.+...... ...++.+.
T Consensus 62 ~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G-~~~~~l~~~i~~~l~~~~---------~~~~~~~~ 129 (153)
T 2wz9_A 62 PQVSFVKLEAEG--VPEVSEKYEISSVPTFLFFKNSQKIDRLDG-AHAPELTKKVQRHASSGS---------FLPSAKVK 129 (153)
T ss_dssp TTSEEEEEETTT--SHHHHHHTTCCSSSEEEEEETTEEEEEEES-SCHHHHHHHHHHHSCTTS---------SCSCCCCC
T ss_pred CCeEEEEEECCC--CHHHHHHcCCCCCCEEEEEECCEEEEEEeC-CCHHHHHHHHHHHhcccc---------CCCccccc
Confidence 479999999965 55999999999 99999998887777778 577889999988766421 13345677
Q ss_pred EecchhhhhhhccC
Q psy1110 103 HLTDDNFDLVIQEE 116 (366)
Q Consensus 103 ~l~~~~~~~~i~~~ 116 (366)
.|++.+|+.+....
T Consensus 130 ~l~~~~f~~~~~~~ 143 (153)
T 2wz9_A 130 VDTDPNSSSVDKLA 143 (153)
T ss_dssp CC------------
T ss_pred cCCCCChhhHHHHH
Confidence 88999998877543
No 269
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=97.81 E-value=3.7e-05 Score=59.94 Aligned_cols=62 Identities=10% Similarity=0.097 Sum_probs=52.3
Q ss_pred chHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCc
Q psy1110 15 SPLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNP 80 (366)
Q Consensus 15 ~~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~ 80 (366)
..+++++. +++.++.|||.. ..++|.+++|. ||+.+|++|.....+.|.++.+.|.+|+.+.
T Consensus 43 ~~~~~~~~--~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 106 (107)
T 2i4a_A 43 GEIGKEFA--GKVTVAKVNIDD--NPETPNAYQVRSIPTLMLVRDGKVIDKKVGALPKSQLKAWVESA 106 (107)
T ss_dssp HHHHHHHT--TSEEEEEEETTT--CCHHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHT
T ss_pred HHHHHHhC--CcEEEEEEECCC--CHHHHHhcCCCccCEEEEEeCCEEEEEecCCCCHHHHHHHHHhc
Confidence 34566665 579999999966 44999999999 9999999888888899999999999999753
No 270
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=97.80 E-value=3.5e-05 Score=59.94 Aligned_cols=62 Identities=8% Similarity=0.003 Sum_probs=52.8
Q ss_pred chHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCc
Q psy1110 15 SPLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNP 80 (366)
Q Consensus 15 ~~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~ 80 (366)
..+++++. ..+.+..|||.. ..++|.+++|+ ||+.+|++|.....+.|.++.++|.+|+.+.
T Consensus 42 ~~~~~~~~--~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~g~~~~~~l~~~l~~~ 105 (106)
T 3die_A 42 EELAADYE--GKADILKLDVDE--NPSTAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKH 105 (106)
T ss_dssp HHHHHHTT--TTCEEEEEETTT--CHHHHHHTTCCSBSEEEEEETTEEEEEEESCCCHHHHHHHHHTT
T ss_pred HHHHHHhc--CCcEEEEEECCc--CHHHHHhCCCcccCEEEEEeCCeEEEEEeCCCCHHHHHHHHHHh
Confidence 35566655 569999999965 55999999999 9999999998888999999999999999764
No 271
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=97.80 E-value=4.5e-05 Score=59.94 Aligned_cols=55 Identities=7% Similarity=-0.155 Sum_probs=40.5
Q ss_pred CCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCcC
Q psy1110 25 KAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNPQ 81 (366)
Q Consensus 25 ~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~~ 81 (366)
+++.++.|||.. ..++|.+++|+ ||+.+|++|.....+.|.++.+.|.+++.+..
T Consensus 48 ~~~~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~g~~~~~~l~~~l~~~~ 104 (105)
T 4euy_A 48 NYVEKIEILLQD--MQEIAGRYAVFTGPTVLLFYNGKEILRESRFISLENLERTIQLFE 104 (105)
T ss_dssp TTEEEEEEEECC--C---------CCCCEEEEEETTEEEEEEESSCCHHHHHHHHHTTC
T ss_pred CCceEEEEECCC--CHHHHHhcCCCCCCEEEEEeCCeEEEEEeCCcCHHHHHHHHHHhh
Confidence 479999999966 44999999999 99999999988888999999999999998653
No 272
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=97.79 E-value=6.8e-06 Score=70.20 Aligned_cols=33 Identities=18% Similarity=0.462 Sum_probs=25.5
Q ss_pred hhhhhhhccCCeEEEEEECCCChhhhcccHHHHHH
Q psy1110 107 DNFDLVIQEESSVLVMFYAPWCGHCKKLKPEYEEA 141 (366)
Q Consensus 107 ~~~~~~i~~~k~vlV~F~a~wC~~Ck~~~p~~e~l 141 (366)
+.++.++... .++| |+++||++|+++.+.++++
T Consensus 40 ~~~~~~i~~~-~Vvv-f~~~~Cp~C~~~k~~L~~~ 72 (146)
T 2ht9_A 40 NQIQETISDN-CVVI-FSKTSCSYCTMAKKLFHDM 72 (146)
T ss_dssp HHHHHHHHHC-SEEE-EECTTCHHHHHHHHHHHHH
T ss_pred HHHHHHhcCC-CEEE-EECCCChhHHHHHHHHHHc
Confidence 5566677655 3334 9999999999999998876
No 273
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=97.78 E-value=2.9e-05 Score=71.78 Aligned_cols=67 Identities=7% Similarity=0.067 Sum_probs=55.5
Q ss_pred chHHHhhcCCCCeEEEEeeecc---cCCcchhccCCcc----ceEEeeecCe--eeEeecCCccHHHHHHHHhCcC
Q psy1110 15 SPLAKEIVKPKAITLGLIERLT---EKADPVCTREKAK----KKVRRQKNAE--VKYVYENGNTKDKIIEFVRNPQ 81 (366)
Q Consensus 15 ~~la~e~~~~~~I~~~~Vdc~~---~~~~~lc~~~~I~----Pti~~f~~g~--~~~~y~g~r~~~~i~~fi~~~~ 81 (366)
..||+++...+.|.|++|||+. +.+.++|.+++|+ ||+.+|++|. ....|.|.|+.++|++|+.+..
T Consensus 43 e~lA~~~~~~~~v~~akVDvd~~g~~~~~~l~~~~~V~~~~~PTl~~f~~G~~~~~~~y~G~~~~~~L~~fi~~~~ 118 (240)
T 2qc7_A 43 KRLAENSASSDDLLVAEVGISDYGDKLNMELSEKYKLDKESYPVFYLFRDGDFENPVPYTGAVKVGAIQRWLKGQG 118 (240)
T ss_dssp HHHHHHHTTCTTEEEEEECCCCSSSCCSHHHHHHTTCCGGGCSEEEEEETTCSSCCEECCSCSCHHHHHHHHHHTT
T ss_pred HHHHHHhcCCCCeEEEEEeCCcccchhhHHHHHHcCCCCCCCCEEEEEeCCCcCcceeecCCCCHHHHHHHHHHhc
Confidence 4678887755679999999432 3356999999998 9999999987 4689999999999999998764
No 274
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=97.77 E-value=4.1e-06 Score=67.98 Aligned_cols=32 Identities=9% Similarity=0.190 Sum_probs=23.1
Q ss_pred hhhhhhccCCeEEEEEECCCChhhhcccHHHHHH
Q psy1110 108 NFDLVIQEESSVLVMFYAPWCGHCKKLKPEYEEA 141 (366)
Q Consensus 108 ~~~~~i~~~k~vlV~F~a~wC~~Ck~~~p~~e~l 141 (366)
.++.+++. ..++.|+++||++|+++.+.++++
T Consensus 11 ~~~~~i~~--~~vv~f~~~~Cp~C~~~~~~L~~~ 42 (114)
T 2hze_A 11 FVQQRLAN--NKVTIFVKYTCPFCRNALDILNKF 42 (114)
T ss_dssp HHHTTCCT--TCEEEEECTTCHHHHHHHHHHTTS
T ss_pred HHHHHhcc--CCEEEEEeCCChhHHHHHHHHHHc
Confidence 34445543 347779999999999988887653
No 275
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=97.77 E-value=3.5e-05 Score=60.35 Aligned_cols=61 Identities=16% Similarity=0.144 Sum_probs=51.6
Q ss_pred hHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCc
Q psy1110 16 PLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNP 80 (366)
Q Consensus 16 ~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~ 80 (366)
.+++++. +.+.++.|||..+ .++|.+++|+ ||+.+|++|.....+.|.++.+.|.+|+.+.
T Consensus 44 ~~~~~~~--~~~~~~~v~~~~~--~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 106 (108)
T 2trx_A 44 EIADEYQ--GKLTVAKLNIDQN--PGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDAN 106 (108)
T ss_dssp HHHHHTT--TTEEEEEEETTTC--TTHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHH
T ss_pred HHHHHhC--CCcEEEEEECCCC--HHHHHHcCCcccCEEEEEeCCEEEEEEecCCCHHHHHHHHHHh
Confidence 4566655 5799999999664 4999999999 9999999888888899999999999998753
No 276
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.77 E-value=2.1e-05 Score=65.54 Aligned_cols=34 Identities=18% Similarity=0.415 Sum_probs=26.1
Q ss_pred chhhhhhhccCCeEEEEEECCCChhhhcccHHHHHH
Q psy1110 106 DDNFDLVIQEESSVLVMFYAPWCGHCKKLKPEYEEA 141 (366)
Q Consensus 106 ~~~~~~~i~~~k~vlV~F~a~wC~~Ck~~~p~~e~l 141 (366)
.+.++.++..+. ++ .|+++||++|+++.+.++++
T Consensus 17 ~~~~~~~i~~~~-vv-vf~~~~Cp~C~~~~~~L~~~ 50 (130)
T 2cq9_A 17 VNQIQETISDNC-VV-IFSKTSCSYCTMAKKLFHDM 50 (130)
T ss_dssp HHHHHHHHHHSS-EE-EEECSSCSHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCc-EE-EEEcCCChHHHHHHHHHHHc
Confidence 455666776554 33 49999999999999998876
No 277
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=97.76 E-value=4.1e-05 Score=61.25 Aligned_cols=63 Identities=10% Similarity=0.034 Sum_probs=53.6
Q ss_pred hHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCcCC
Q psy1110 16 PLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNPQA 82 (366)
Q Consensus 16 ~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~~~ 82 (366)
.+++++. .++.+..|||.. ..++|.+++|+ ||+.+|++|.....+.|.++.+.|.+|+.+...
T Consensus 54 ~~~~~~~--~~~~~~~v~~~~--~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~G~~~~~~l~~~l~~~l~ 118 (121)
T 2i1u_A 54 EIATERA--TDLTVAKLDVDT--NPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVVP 118 (121)
T ss_dssp HHHHHTT--TTCEEEEEETTT--CHHHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHTCSCCC
T ss_pred HHHHHhc--CCeEEEEEECCC--CHHHHHhcCCCcCCEEEEEECCEEEEEecCCCCHHHHHHHHHHHHh
Confidence 4565654 579999999965 55999999999 999999999888889999999999999987654
No 278
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.76 E-value=4e-05 Score=63.17 Aligned_cols=66 Identities=15% Similarity=0.275 Sum_probs=54.5
Q ss_pred hHHHhhcCC-CCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCcCCcc
Q psy1110 16 PLAKEIVKP-KAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNPQATS 84 (366)
Q Consensus 16 ~la~e~~~~-~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~~~~~ 84 (366)
.+++++... ..|.++.|||.. ..++|.+++|+ ||+.+|++|. ...|.|.++.+.|.+|+.+.....
T Consensus 58 ~~~~~~~~~~~~v~~~~vd~~~--~~~~~~~~~v~~~Pt~~~~~~G~-~~~~~g~~~~~~l~~~l~~~~~~~ 126 (140)
T 2dj1_A 58 KIASTLKDNDPPIAVAKIDATS--ASMLASKFDVSGYPTIKILKKGQ-AVDYDGSRTQEEIVAKVREVSQPD 126 (140)
T ss_dssp HHHHHHHSSSSCCEEEEECTTT--CHHHHHHTTCCSSSEEEEEETTE-EEECCSCCCHHHHHHHHHHHHSSS
T ss_pred HHHHHHhccCCceEEEEEeCcc--cHHHHHHCCCCccCeEEEEECCc-EEEcCCCCCHHHHHHHHHHhcCCC
Confidence 466666532 249999999955 55999999999 9999998887 788999999999999998876653
No 279
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=97.76 E-value=4.5e-05 Score=62.36 Aligned_cols=61 Identities=15% Similarity=0.120 Sum_probs=52.9
Q ss_pred chHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhC
Q psy1110 15 SPLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRN 79 (366)
Q Consensus 15 ~~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~ 79 (366)
..+++++. +++.+..|||.. ..++|.+++|+ ||+.+|++|.....+.|.++.++|.+|+++
T Consensus 65 ~~~~~~~~--~~v~~~~vd~d~--~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~ 127 (128)
T 3ul3_B 65 DKLQKYYG--KRIYLLKVDLDK--NESLARKFSVKSLPTIILLKNKTMLARKDHFVSSNDLIALIKK 127 (128)
T ss_dssp HHHHHHHG--GGEEEEEEEGGG--CHHHHHHTTCCSSSEEEEEETTEEEEEESSCCCHHHHHHHHTT
T ss_pred HHHHHHhc--CCeEEEEEECCC--CHHHHHHcCCCCcCEEEEEECCEEEEEecCCCCHHHHHHHHHh
Confidence 35666665 689999999966 45999999999 999999999888899999999999999975
No 280
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=97.73 E-value=4e-05 Score=59.85 Aligned_cols=61 Identities=8% Similarity=0.015 Sum_probs=52.3
Q ss_pred hHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCc
Q psy1110 16 PLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNP 80 (366)
Q Consensus 16 ~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~ 80 (366)
.+++++. +.+.++.|||.. ..++|.+++|+ ||+.+|++|.....|.|.++.++|.+|+.+.
T Consensus 45 ~~~~~~~--~~~~~~~v~~~~--~~~~~~~~~i~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~l~~~ 107 (109)
T 3tco_A 45 KVAEKYK--GKAVFGRLNVDE--NQKIADKYSVLNIPTTLIFVNGQLVDSLVGAVDEDTLESTVNKY 107 (109)
T ss_dssp HHHHHTT--TTSEEEEEETTT--CHHHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHH
T ss_pred HHHHHhC--CCceEEEEcccc--CHHHHHhcCcccCCEEEEEcCCcEEEeeeccCCHHHHHHHHHHH
Confidence 4555555 579999999965 55999999999 9999999998888899999999999999764
No 281
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=97.73 E-value=5.6e-05 Score=58.83 Aligned_cols=64 Identities=13% Similarity=0.057 Sum_probs=53.6
Q ss_pred chHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCcCC
Q psy1110 15 SPLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNPQA 82 (366)
Q Consensus 15 ~~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~~~ 82 (366)
..+++++. +++.+..|||.. ..++|.+++|. ||+.+|++|.....|.|.++.++|.+|+.+...
T Consensus 41 ~~~~~~~~--~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~l~~~l~ 106 (109)
T 2yzu_A 41 EEIAKEYE--GKLLVAKLDVDE--NPKTAMRYRVMSIPTVILFKDGQPVEVLVGAQPKRNYQAKIEKHLP 106 (109)
T ss_dssp HHHHHHTB--TTBEEEEEETTT--CHHHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHTTC-
T ss_pred HHHHHHhh--CceEEEEEECCC--CHhHHHhCCCCcCCEEEEEeCCcEeeeEeCCCCHHHHHHHHHHHhh
Confidence 35566665 579999999965 45999999999 999999988888889999999999999987654
No 282
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=97.72 E-value=3.5e-05 Score=65.78 Aligned_cols=64 Identities=13% Similarity=0.153 Sum_probs=54.8
Q ss_pred chHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCcCC
Q psy1110 15 SPLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNPQA 82 (366)
Q Consensus 15 ~~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~~~ 82 (366)
..+|+++. +++.|+.|||.. +.++|.+++|+ ||+.+|++|.....|.|.++.++|.+|+.+...
T Consensus 87 ~~la~~~~--~~v~~~~vd~~~--~~~l~~~~~i~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~ 152 (155)
T 2ppt_A 87 QAAAATLA--GQVRLAKIDTQA--HPAVAGRHRIQGIPAFILFHKGRELARAAGARPASELVGFVRGKLG 152 (155)
T ss_dssp HHHHHHHT--TTCEEEEEETTT--STHHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred HHHHHHcc--CCEEEEEEeCCc--cHHHHHHcCCCcCCEEEEEeCCeEEEEecCCCCHHHHHHHHHHHhc
Confidence 45777776 579999999965 45999999999 999999999888889999999999999987544
No 283
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=97.71 E-value=4e-05 Score=60.81 Aligned_cols=65 Identities=14% Similarity=0.300 Sum_probs=53.0
Q ss_pred HHHhhcCC-CCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeee--EeecCCccHHHHHHHHhCcCCc
Q psy1110 17 LAKEIVKP-KAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVK--YVYENGNTKDKIIEFVRNPQAT 83 (366)
Q Consensus 17 la~e~~~~-~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~--~~y~g~r~~~~i~~fi~~~~~~ 83 (366)
+++++... ..+.++.|||..+ .++|.+++|+ ||+.+|++|... ..|.|.++.+.|.+|+.+...+
T Consensus 49 ~~~~~~~~~~~v~~~~vd~~~~--~~~~~~~~v~~~Pt~~~~~~g~~~~~~~~~g~~~~~~l~~~l~~~~~~ 118 (120)
T 1mek_A 49 AAGKLKAEGSEIRLAKVDATEE--SDLAQQYGVRGYPTIKFFRNGDTASPKEYTAGREADDIVNWLKKRTGP 118 (120)
T ss_dssp HHHTTTTTCCCCBCEEEETTTC--CSSHHHHTCCSSSEEEEEESSCSSSCEECCCCSSHHHHHHHHHTTSCC
T ss_pred HHHHHhccCCcEEEEEEcCCCC--HHHHHHCCCCcccEEEEEeCCCcCCcccccCccCHHHHHHHHHhccCC
Confidence 44444422 4699999999664 4899999999 999999988765 8899999999999999887654
No 284
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=97.71 E-value=5.6e-05 Score=58.88 Aligned_cols=62 Identities=6% Similarity=-0.045 Sum_probs=52.0
Q ss_pred hHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCcC
Q psy1110 16 PLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNPQ 81 (366)
Q Consensus 16 ~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~~ 81 (366)
.+++++. ..+.+..|||.. ..++|.+++|+ ||+.+|++|.....+.|.++.+.|.+|+.+..
T Consensus 41 ~~~~~~~--~~v~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l 104 (105)
T 1nsw_A 41 EFAEAHA--DKVTVAKLNVDE--NPETTSQFGIMSIPTLILFKGGRPVKQLIGYQPKEQLEAQLADVL 104 (105)
T ss_dssp HHHHHST--TTCEEEEEETTT--CHHHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHTTTTT
T ss_pred HHHHHhc--CCcEEEEEECcC--CHHHHHHcCCccccEEEEEeCCeEEEEEecCCCHHHHHHHHHHHh
Confidence 4566655 569999999965 45999999999 99999998887888999999999999997643
No 285
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.70 E-value=4.9e-05 Score=61.63 Aligned_cols=64 Identities=14% Similarity=0.159 Sum_probs=53.1
Q ss_pred hHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCcCCc
Q psy1110 16 PLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNPQAT 83 (366)
Q Consensus 16 ~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~~~~ 83 (366)
.+++++.. .++.++.|||.. ..++|.+++|+ ||+.+|++|. ...|.|.++.+.|.+|+.+....
T Consensus 46 ~~~~~~~~-~~v~~~~vd~~~--~~~~~~~~~v~~~Pt~~~~~~G~-~~~~~G~~~~~~l~~~l~~~~~~ 111 (126)
T 1x5e_A 46 SFAEWGED-LEVNIAKVDVTE--QPGLSGRFIINALPTIYHCKDGE-FRRYQGPRTKKDFINFISDKEWK 111 (126)
T ss_dssp HHHHHHGG-GTCEEEEEETTT--CHHHHHHTTCCSSSEEEEEETTE-EEECCSCCCHHHHHHHHHTCGGG
T ss_pred HHHHHhcc-CCeEEEEEECcC--CHHHHHHcCCcccCEEEEEeCCe-EEEeecCCCHHHHHHHHHHHhhc
Confidence 45555542 379999999965 55999999999 9999998887 57899999999999999987665
No 286
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=97.70 E-value=4e-05 Score=60.51 Aligned_cols=63 Identities=16% Similarity=0.138 Sum_probs=52.4
Q ss_pred hHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCcCC
Q psy1110 16 PLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNPQA 82 (366)
Q Consensus 16 ~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~~~ 82 (366)
.+++++. +.+.+..|||.. ..++|.+++|+ ||+.+|++|.....|.|.++.+.|.+|+.+...
T Consensus 49 ~~~~~~~--~~v~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~g~~~~~~l~~~l~~~l~ 113 (115)
T 1thx_A 49 LAANTYS--DRLKVVKLEIDP--NPTTVKKYKVEGVPALRLVKGEQILDSTEGVISKDKLLSFLDTHLN 113 (115)
T ss_dssp HHHHHTT--TTCEEEEEESTT--CHHHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHHC
T ss_pred HHHHHhC--CcEEEEEEEcCC--CHHHHHHcCCCceeEEEEEcCCEEEEEecCCCCHHHHHHHHHHHhc
Confidence 4555554 469999999965 55999999999 999999988888889999999999999976543
No 287
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=97.68 E-value=6e-05 Score=61.99 Aligned_cols=61 Identities=16% Similarity=0.144 Sum_probs=51.7
Q ss_pred hHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCc
Q psy1110 16 PLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNP 80 (366)
Q Consensus 16 ~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~ 80 (366)
.+++++. +++.++.|||..+. ++|.+++|+ ||+.+|++|.....+.|.++.+.|.+|+.+.
T Consensus 64 ~l~~~~~--~~v~~~~vd~~~~~--~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 126 (128)
T 2o8v_B 64 EIADEYQ--GKLTVAKLNIDQNP--GTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDAN 126 (128)
T ss_dssp HHHHHTT--TTEEEEEEETTTCC--TTSGGGTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHH
T ss_pred HHHHHhc--CCeEEEEEECCCCH--HHHHHcCCCccCEEEEEeCCEEEEEEcCCCCHHHHHHHHHHh
Confidence 4566655 57999999996644 999999999 9999999888888899999999999999753
No 288
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=97.65 E-value=1.5e-05 Score=67.62 Aligned_cols=74 Identities=8% Similarity=0.129 Sum_probs=52.5
Q ss_pred cCCCCCCchHHHhhcCC-CCeE--EEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCcCC
Q psy1110 8 TLNKEDTSPLAKEIVKP-KAIT--LGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNPQA 82 (366)
Q Consensus 8 ~~~~~~~~~la~e~~~~-~~I~--~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~~~ 82 (366)
+-.+....|.-.++++. +++. |++||++++. ++|.+++|+ ||+.+|++|.....|.|.++.+.|.+|+.+...
T Consensus 48 C~~C~~l~P~l~~la~~~~~v~~~~~~Vd~d~~~--~la~~~~V~~iPT~~~fk~G~~v~~~~G~~~~~~l~~~i~~~l~ 125 (142)
T 2es7_A 48 TPEVSDNPVMIAELLREFPQFDWQVAVADLEQSE--AIGDRFNVRRFPATLVFTDGKLRGALSGIHPWAELLTLMRSIVD 125 (142)
T ss_dssp ----CCHHHHHHHHHHTCTTSCCEEEEECHHHHH--HHHHTTTCCSSSEEEEESCC----CEESCCCHHHHHHHHHHHHC
T ss_pred CccHHHHHHHHHHHHHHhcccceeEEEEECCCCH--HHHHhcCCCcCCeEEEEeCCEEEEEEeCCCCHHHHHHHHHHHhc
Confidence 44455555544444432 4688 9999997755 999999999 999999999888889999999999999987665
Q ss_pred c
Q psy1110 83 T 83 (366)
Q Consensus 83 ~ 83 (366)
.
T Consensus 126 ~ 126 (142)
T 2es7_A 126 T 126 (142)
T ss_dssp -
T ss_pred c
Confidence 4
No 289
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.61 E-value=8.2e-05 Score=60.48 Aligned_cols=66 Identities=14% Similarity=0.239 Sum_probs=54.3
Q ss_pred hHHHhhcC--CCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCcCCc
Q psy1110 16 PLAKEIVK--PKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNPQAT 83 (366)
Q Consensus 16 ~la~e~~~--~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~~~~ 83 (366)
.+|+++.. ...+.|+.|||.. ..++|.+++|+ ||+.+|++|.....|.|.++.++|.+|+.+....
T Consensus 49 ~~~~~~~~~~~~~~~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~g~~~~~~~G~~~~~~l~~~l~~~~~~ 118 (133)
T 1x5d_A 49 AAASEVKEQTKGKVKLAAVDATV--NQVLASRYGIRGFPTIKIFQKGESPVDYDGGRTRSDIVSRALDLFSD 118 (133)
T ss_dssp HHHHHHHHHTTTSEEEEEEETTT--CCHHHHHHTCCSSSEEEEEETTEEEEEECSCCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcCCcEEEEEEECCC--CHHHHHhCCCCeeCeEEEEeCCCceEEecCCCCHHHHHHHHHHHhhc
Confidence 45555541 1469999999966 44999999999 9999999988888999999999999999886654
No 290
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=97.61 E-value=2.3e-05 Score=69.33 Aligned_cols=67 Identities=12% Similarity=0.066 Sum_probs=52.6
Q ss_pred chHHHhhcCC---CCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeee------------Eee---cC-CccHHHH
Q psy1110 15 SPLAKEIVKP---KAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVK------------YVY---EN-GNTKDKI 73 (366)
Q Consensus 15 ~~la~e~~~~---~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~------------~~y---~g-~r~~~~i 73 (366)
..||+++... ++|.|++||++++. +++.++||+ |||.+|++|+.. ..| .| +|+.+.|
T Consensus 67 e~lA~~~~~~~~~~~v~f~kvD~d~~~--~la~~~~I~siPtl~~F~~g~~~~~~~~~~~~~~~~~y~~~~~~~~~ae~l 144 (178)
T 3ga4_A 67 HAVADVIRSQAPQSLNLFFTVDVNEVP--QLVKDLKLQNVPHLVVYPPAESNKQSQFEWKTSPFYQYSLVPENAENTLQF 144 (178)
T ss_dssp HHHHHHHHHHCTTCCEEEEEEETTTCH--HHHHHTTCCSSCEEEEECCCCGGGGGGCCTTTSCCEEECCCGGGTTCHHHH
T ss_pred HHHHHHhhhccCCCCEEEEEEECccCH--HHHHHcCCCCCCEEEEEcCCCCCCccccccccCCcceeecccCCCcCHHHH
Confidence 3566666421 67999999997755 999999999 999999988532 455 35 8999999
Q ss_pred HHHHhCcCCc
Q psy1110 74 IEFVRNPQAT 83 (366)
Q Consensus 74 ~~fi~~~~~~ 83 (366)
.+||.+....
T Consensus 145 a~fi~~~t~~ 154 (178)
T 3ga4_A 145 GDFLAKILNI 154 (178)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHhcCC
Confidence 9999876664
No 291
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=97.60 E-value=9.4e-05 Score=61.86 Aligned_cols=64 Identities=9% Similarity=0.109 Sum_probs=54.9
Q ss_pred chHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCcCC
Q psy1110 15 SPLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNPQA 82 (366)
Q Consensus 15 ~~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~~~ 82 (366)
..+++++. +.+.|..||+.. ..+++.+++|+ ||+.+|++|.....|.|.++.+.|.+|+.+...
T Consensus 78 ~~~~~~~~--~~~~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~ 143 (148)
T 3p2a_A 78 AETAAERA--GKVRFVKVNTEA--EPALSTRFRIRSIPTIMLYRNGKMIDMLNGAVPKAPFDNWLDEQLS 143 (148)
T ss_dssp HHHHHHTT--TTCEEEEEETTT--CHHHHHHTTCCSSSEEEEEETTEEEEEESSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHcC--CceEEEEEECcC--CHHHHHHCCCCccCEEEEEECCeEEEEEeCCCCHHHHHHHHHHHhc
Confidence 45666665 579999999955 55999999999 999999999888899999999999999987654
No 292
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=97.59 E-value=3e-05 Score=69.25 Aligned_cols=65 Identities=12% Similarity=0.235 Sum_probs=55.1
Q ss_pred chHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCcCCc
Q psy1110 15 SPLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNPQAT 83 (366)
Q Consensus 15 ~~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~~~~ 83 (366)
..+|+++. +.+.|+.|||.. ..++|.+++|. ||+.+|++|.....|.|.++.++|.+|+.+....
T Consensus 137 ~~l~~~~~--~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~i~~~l~~ 203 (210)
T 3apq_A 137 REFAKEVD--GLLRIGAVNCGD--DRMLCRMKGVNSYPSLFIFRSGMAAVKYNGDRSKESLVAFAMQHVRS 203 (210)
T ss_dssp HHHHHHTB--TTBEEEEEETTT--CHHHHHHTTCCSSSEEEEECTTSCCEECCSCCCHHHHHHHHHHHHHC
T ss_pred HHHHHHhc--CceEEEEEECCc--cHHHHHHcCCCcCCeEEEEECCCceeEecCCCCHHHHHHHHHHhCcc
Confidence 35666665 579999999966 45999999999 9999999888888999999999999999876543
No 293
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=97.59 E-value=0.00012 Score=63.03 Aligned_cols=42 Identities=19% Similarity=0.127 Sum_probs=35.9
Q ss_pred CCeEEEEEECCCChhhhcccHHHHHHHHHH--hccccEEEeecc
Q psy1110 116 ESSVLVMFYAPWCGHCKKLKPEYEEAAATM--KQQRAYYGMGML 157 (366)
Q Consensus 116 ~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~--~~~v~~~~v~~~ 157 (366)
.+.+++.|+..||++|..+.+.+.++.++| .+++.++..+..
T Consensus 27 a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 70 (175)
T 1z6m_A 27 APVKMIEFINVRCPYCRKWFEESEELLAQSVKSGKVERIIKLFD 70 (175)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred CCeEEEEEECCCCcchHHHHHHHHHHHHHHhhCCcEEEEEEeCC
Confidence 577899999999999999999999999888 666777776654
No 294
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=97.59 E-value=7.1e-05 Score=59.09 Aligned_cols=61 Identities=11% Similarity=0.054 Sum_probs=51.8
Q ss_pred hHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCc
Q psy1110 16 PLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNP 80 (366)
Q Consensus 16 ~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~ 80 (366)
.+++++. +.+.+..|||.. ..++|.+++|. ||+.+|++|.....+.|.++.+.|.+|+.+.
T Consensus 47 ~~~~~~~--~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 109 (112)
T 1t00_A 47 AIAAEYG--DKIEIVKLNIDE--NPGTAAKYGVMSIPTLNVYQGGEVAKTIVGAKPKAAIVRDLEDF 109 (112)
T ss_dssp HHHHHTT--TTCEEEEEETTT--CHHHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHTHHH
T ss_pred HHHHHhc--CCeEEEEEEcCC--CHHHHHhCCCCcccEEEEEeCCEEEEEEeCCCCHHHHHHHHHHH
Confidence 4566655 569999999965 55999999999 9999999998888899999999999998754
No 295
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=97.58 E-value=7.3e-05 Score=60.24 Aligned_cols=61 Identities=10% Similarity=0.137 Sum_probs=51.5
Q ss_pred hHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCc
Q psy1110 16 PLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNP 80 (366)
Q Consensus 16 ~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~ 80 (366)
.+++++. +.|.+..|||+. ..++|.+++|+ ||+.+|++|.....|.|.++.+.|.+|+.+.
T Consensus 55 ~~~~~~~--~~v~~~~vd~d~--~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 117 (119)
T 1w4v_A 55 KMVAKQH--GKVVMAKVDIDD--HTDLAIEYEVSAVPTVLAMKNGDVVDKFVGIKDEDQLEAFLKKL 117 (119)
T ss_dssp HHHHHTT--TSSEEEEEETTT--THHHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHH
T ss_pred HHHHHhc--CCeEEEEEeCCC--CHHHHHHcCCCcccEEEEEeCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 4566655 579999999965 45899999999 9999999888888899999999999998753
No 296
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=97.58 E-value=8.8e-05 Score=61.45 Aligned_cols=64 Identities=8% Similarity=0.038 Sum_probs=53.6
Q ss_pred chHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCcCC
Q psy1110 15 SPLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNPQA 82 (366)
Q Consensus 15 ~~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~~~ 82 (366)
..+++++. +++.|+.|||.. +.++|.+++|+ ||+.+|++|.....|.|.++.+.|.+|+.+...
T Consensus 73 ~~l~~~~~--~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~i~~~l~ 138 (140)
T 1v98_A 73 EELARDHA--GRLKVVKVNVDE--HPGLAARYGVRSVPTLVLFRRGAPVATWVGASPRRVLEERLRPYLE 138 (140)
T ss_dssp HHHHHHTT--TTEEEEEEETTT--CHHHHHHTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHHT
T ss_pred HHHHHHcc--CceEEEEEECCC--CHHHHHHCCCCccCEEEEEeCCcEEEEEeCCCCHHHHHHHHHHHHc
Confidence 34666665 579999999955 55999999999 999999999888889999999999999976543
No 297
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.57 E-value=5.2e-05 Score=61.67 Aligned_cols=63 Identities=10% Similarity=0.145 Sum_probs=51.9
Q ss_pred hHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCee-eEeecCCccHHHHHHHHhCcCC
Q psy1110 16 PLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEV-KYVYENGNTKDKIIEFVRNPQA 82 (366)
Q Consensus 16 ~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~-~~~y~g~r~~~~i~~fi~~~~~ 82 (366)
.+++++. ..+.|+.|||.. ..++|.+++|+ ||+.+|++|+. ...|.|.++.++|++|+.+...
T Consensus 59 ~~~~~~~--~~~~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~~~~~~~~~~G~~~~~~l~~~l~~~l~ 124 (130)
T 2dml_A 59 KAATALK--DVVKVGAVNADK--HQSLGGQYGVQGFPTIKIFGANKNKPEDYQGGRTGEAIVDAALSALR 124 (130)
T ss_dssp HHHHHTT--TTSEEEEEETTT--CHHHHHHHTCCSSSEEEEESSCTTSCEECCSCCSHHHHHHHHHHHHH
T ss_pred HHHHHhc--CceEEEEEeCCC--CHHHHHHcCCCccCEEEEEeCCCCeEEEeecCCCHHHHHHHHHHHHh
Confidence 3455544 469999999965 55999999999 99999998776 7889999999999999987543
No 298
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=97.56 E-value=8.4e-05 Score=57.18 Aligned_cols=61 Identities=15% Similarity=0.100 Sum_probs=50.7
Q ss_pred hHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCcC
Q psy1110 16 PLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNPQ 81 (366)
Q Consensus 16 ~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~~ 81 (366)
.+++++. + +.++.|||.. ..++|.+++|+ ||+.+|++|.....|.|.++.++|.+|+.+..
T Consensus 40 ~~~~~~~--~-~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~l~~~l 102 (104)
T 2e0q_A 40 ELAEDYP--Q-VGFGKLNSDE--NPDIAARYGVMSLPTVIFFKDGEPVDEIIGAVPREEIEIRIKNLL 102 (104)
T ss_dssp HHHHHCT--T-SEEEEEETTT--CHHHHHHTTCCSSCEEEEEETTEEEEEEESCCCHHHHHHHHHHHH
T ss_pred HHHHHcC--C-ceEEEEECCC--CHHHHHhCCccccCEEEEEECCeEhhhccCCCCHHHHHHHHHHHh
Confidence 4555554 3 9999999965 55999999999 99999998888888999999999999997643
No 299
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=97.54 E-value=3.8e-05 Score=62.84 Aligned_cols=33 Identities=15% Similarity=0.382 Sum_probs=23.1
Q ss_pred hhhhhhhccCCeEEEEEECCCChhhhcc-cHHHHHH
Q psy1110 107 DNFDLVIQEESSVLVMFYAPWCGHCKKL-KPEYEEA 141 (366)
Q Consensus 107 ~~~~~~i~~~k~vlV~F~a~wC~~Ck~~-~p~~e~l 141 (366)
+.+++++...+ ++.|+++||++|+++ .+.++++
T Consensus 16 ~~~~~~i~~~~--Vvvf~~~~Cp~C~~alk~~L~~~ 49 (118)
T 3c1r_A 16 KHVKDLIAENE--IFVASKTYCPYCHAALNTLFEKL 49 (118)
T ss_dssp HHHHHHHHHSS--EEEEECSSCHHHHHHHHHHHTTS
T ss_pred HHHHHHHccCc--EEEEEcCCCcCHHHHHHHHHHHc
Confidence 34555665443 556999999999998 7766544
No 300
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=97.53 E-value=4.7e-05 Score=66.59 Aligned_cols=42 Identities=12% Similarity=0.237 Sum_probs=36.1
Q ss_pred CCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeecc
Q psy1110 116 ESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGML 157 (366)
Q Consensus 116 ~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~ 157 (366)
++.+++.||.+||++|..+.|.+.++.+.+..++.+..+.+.
T Consensus 25 a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~~~v~~~~~p~~ 66 (193)
T 2rem_A 25 GKIEVVEIFGYTCPHCAHFDSKLQAWGARQAKDVRFTLVPAV 66 (193)
T ss_dssp TCEEEEEEECTTCHHHHHHHHHHHHHHHTSCTTEEEEEEECC
T ss_pred CCeEEEEEECCCChhHhhhhHHHHHHHHhcCCceEEEEeCcc
Confidence 466899999999999999999999999988777777766654
No 301
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=97.53 E-value=0.00014 Score=56.36 Aligned_cols=60 Identities=5% Similarity=0.088 Sum_probs=50.2
Q ss_pred hHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCc
Q psy1110 16 PLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNP 80 (366)
Q Consensus 16 ~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~ 80 (366)
.+++++. +++.+..|||.. ..++|.+++|+ ||+.+|++|.....+.| .+.+.|.+|+.+.
T Consensus 44 ~~~~~~~--~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~g-~~~~~l~~~i~~~ 105 (106)
T 1xwb_A 44 ELSTQFA--DNVVVLKVDVDE--CEDIAMEYNISSMPTFVFLKNGVKVEEFAG-ANAKRLEDVIKAN 105 (106)
T ss_dssp HHHHHTT--TTEEEEEEETTT--CHHHHHHTTCCSSSEEEEEETTEEEEEEES-CCHHHHHHHHHHT
T ss_pred HHHHHhC--CCeEEEEEeccc--hHHHHHHcCCCcccEEEEEcCCcEEEEEcC-CCHHHHHHHHHHh
Confidence 4566655 679999999955 55999999999 99999999988888888 7889999998653
No 302
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=97.52 E-value=9.1e-05 Score=57.83 Aligned_cols=61 Identities=11% Similarity=0.028 Sum_probs=51.0
Q ss_pred hHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCc
Q psy1110 16 PLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNP 80 (366)
Q Consensus 16 ~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~ 80 (366)
.+++++. ..+.+..|||.. ..++|.++||+ ||+.+|++|.....+.|.++.+.|.+++.+.
T Consensus 43 ~~~~~~~--~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 105 (107)
T 1dby_A 43 EIAGEYK--DKLKCVKLNTDE--SPNVASEYGIRSIPTIMVFKGGKKCETIIGAVPKATIVQTVEKY 105 (107)
T ss_dssp HHHHHTT--TTCEEEEEETTT--CHHHHHHHTCCSSCEEEEESSSSEEEEEESCCCHHHHHHHHHHH
T ss_pred HHHHHhC--CceEEEEEECCC--CHHHHHHCCCCcCCEEEEEeCCEEEEEEeCCCCHHHHHHHHHHH
Confidence 4555554 569999999965 45999999999 9999999888888899999999999998754
No 303
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=97.49 E-value=0.0001 Score=58.67 Aligned_cols=33 Identities=18% Similarity=0.464 Sum_probs=24.7
Q ss_pred hhhhhhhccCCeEEEEEEC-----CCChhhhcccHHHHHH
Q psy1110 107 DNFDLVIQEESSVLVMFYA-----PWCGHCKKLKPEYEEA 141 (366)
Q Consensus 107 ~~~~~~i~~~k~vlV~F~a-----~wC~~Ck~~~p~~e~l 141 (366)
+.++++++.++ ++| |+. +||++|+++.+.++++
T Consensus 8 ~~~~~~i~~~~-vvv-f~~g~~~~~~C~~C~~~~~~L~~~ 45 (105)
T 2yan_A 8 ERLKVLTNKAS-VML-FMKGNKQEAKCGFSKQILEILNST 45 (105)
T ss_dssp HHHHHHHTSSS-EEE-EESBCSSSBCTTHHHHHHHHHHHH
T ss_pred HHHHHHhccCC-EEE-EEecCCCCCCCccHHHHHHHHHHC
Confidence 45666776554 444 777 9999999999988776
No 304
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=97.49 E-value=0.00012 Score=56.77 Aligned_cols=60 Identities=22% Similarity=0.147 Sum_probs=50.5
Q ss_pred hHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhC
Q psy1110 16 PLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRN 79 (366)
Q Consensus 16 ~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~ 79 (366)
.+++++. ..+.+..|||.. ..++|.+++|+ ||+.+|++|.....+.|.++.+.|.+++.+
T Consensus 42 ~~~~~~~--~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~G~~~~~~l~~~l~~ 103 (105)
T 1fb6_A 42 ELAKEYS--GKIAVYKLNTDE--APGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEK 103 (105)
T ss_dssp HHHHHTT--TTCEEEEEETTT--CHHHHHHTTCCSSSEEEEEETTEEEEEEEECCCHHHHHHHHHH
T ss_pred HHHHHhc--CceEEEEEcCcc--hHHHHHhCCCCcccEEEEEeCCeEEEEEecCCCHHHHHHHHHh
Confidence 4555554 569999999965 55999999999 999999989888888999999999999865
No 305
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=97.45 E-value=0.00014 Score=59.98 Aligned_cols=64 Identities=9% Similarity=0.011 Sum_probs=52.2
Q ss_pred chHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCcCC
Q psy1110 15 SPLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNPQA 82 (366)
Q Consensus 15 ~~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~~~ 82 (366)
..+++++. ..+.+..|||.. ..++|.+++|+ ||+.+|.+++....|.|.++.+.|.+|+.+.+.
T Consensus 74 ~~~~~~~~--~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~~g~~~~~~G~~~~~~l~~~l~~~l~ 139 (141)
T 3hxs_A 74 EELSKEYA--GKIYIYKVNVDK--EPELARDFGIQSIPTIWFVPMKGEPQVNMGALSKEQLKGYIDKVLL 139 (141)
T ss_dssp HHHHHHTT--TTCEEEEEETTT--CHHHHHHTTCCSSSEEEEECSSSCCEEEESCCCHHHHHHHHHHTTC
T ss_pred HHHHHHhc--CceEEEEEECCC--CHHHHHHcCCCCcCEEEEEeCCCCEEEEeCCCCHHHHHHHHHHHHc
Confidence 34566655 579999999965 55999999999 999999665555688999999999999987654
No 306
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=97.42 E-value=0.00012 Score=58.85 Aligned_cols=51 Identities=10% Similarity=0.100 Sum_probs=45.4
Q ss_pred CeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhC
Q psy1110 26 AITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRN 79 (366)
Q Consensus 26 ~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~ 79 (366)
++.|..|||+. ..++|.+++|+ ||+.+|++|.....+.|. +.+.|.+++.+
T Consensus 62 ~v~~~~vd~d~--~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~ 114 (116)
T 3qfa_C 62 NVIFLEVDVDD--CQDVASECEVKSMPTFQFFKKGQKVGEFSGA-NKEKLEATINE 114 (116)
T ss_dssp TSEEEEEETTT--THHHHHHTTCCSSSEEEEESSSSEEEEEESC-CHHHHHHHHHH
T ss_pred CCEEEEEECCC--CHHHHHHcCCccccEEEEEeCCeEEEEEcCC-CHHHHHHHHHH
Confidence 49999999965 55999999999 999999989888888898 99999999865
No 307
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=97.41 E-value=9.2e-05 Score=63.19 Aligned_cols=44 Identities=30% Similarity=0.520 Sum_probs=36.1
Q ss_pred cccccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCC
Q psy1110 275 VTREKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPT 322 (366)
Q Consensus 275 ~~~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~ 322 (366)
..++..++..++|+++||+++ .+|+ ...|.++.+.|.++|++..
T Consensus 95 v~~~~~la~~~gI~gtPt~vi-~nG~---~i~G~~~~~~l~~~i~~~~ 138 (147)
T 3gv1_A 95 VAETTSLGEQFGFNGTPTLVF-PNGR---TQSGYSPMPQLEEIIRKNQ 138 (147)
T ss_dssp HHHHHHHHHHTTCCSSCEEEC-TTSC---EEESCCCTTHHHHHHHHTS
T ss_pred HHHHHHHHHHhCCCccCEEEE-ECCE---EeeCCCCHHHHHHHHHHHH
Confidence 345678899999999999998 7887 3568888999998887655
No 308
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=97.39 E-value=0.00011 Score=56.32 Aligned_cols=23 Identities=17% Similarity=0.580 Sum_probs=19.3
Q ss_pred EEEEEECCCChhhhcccHHHHHH
Q psy1110 119 VLVMFYAPWCGHCKKLKPEYEEA 141 (366)
Q Consensus 119 vlV~F~a~wC~~Ck~~~p~~e~l 141 (366)
.++.|+++||++|+++.+.++++
T Consensus 7 ~v~~y~~~~C~~C~~~~~~L~~~ 29 (89)
T 2klx_A 7 EIILYTRPNCPYCKRARDLLDKK 29 (89)
T ss_dssp CEEEESCSCCTTTHHHHHHHHHH
T ss_pred eEEEEECCCChhHHHHHHHHHHc
Confidence 36778999999999998888764
No 309
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=97.38 E-value=0.00043 Score=62.25 Aligned_cols=65 Identities=17% Similarity=0.136 Sum_probs=55.8
Q ss_pred chHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCcCCc
Q psy1110 15 SPLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNPQAT 83 (366)
Q Consensus 15 ~~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~~~~ 83 (366)
..|++++. ..+.++.|||..+ .++|.+++|+ ||+.+|++|.....|.|.++.+.|.+|+.+....
T Consensus 53 ~~l~~~~~--~~v~~~~vd~d~~--~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~l~~ 119 (222)
T 3dxb_A 53 DEIADEYQ--GKLTVAKLNIDQN--PGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDANLAG 119 (222)
T ss_dssp HHHHHHTT--TTCEEEEEETTTC--TTTGGGGTCCSBSEEEEEETTEEEEEEESCCCHHHHHHHHHHHSCC
T ss_pred HHHHHHhc--CCcEEEEEECCCC--HHHHHHcCCCcCCEEEEEECCeEEEEeccccChHHHHHHHHhhccc
Confidence 35666665 5699999999664 4999999999 9999999998888999999999999999887765
No 310
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=97.37 E-value=0.00019 Score=55.15 Aligned_cols=35 Identities=11% Similarity=0.100 Sum_probs=26.1
Q ss_pred cccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHh
Q psy1110 279 KSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMR 319 (366)
Q Consensus 279 ~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~ 319 (366)
..+.+.+++.++|++++ +|+.+ .| .+.+.|.+++.
T Consensus 57 ~~l~~~~g~~~vP~l~~--~g~~i---~G-~~~~~l~~~l~ 91 (92)
T 3ic4_A 57 EKVHSISGSYSVPVVVK--GDKHV---LG-YNEEKLKELIR 91 (92)
T ss_dssp HHHHHHHSSSCSCEEEE--TTEEE---ES-CCHHHHHHHHH
T ss_pred HHHHHhcCCCCcCEEEE--CCEEE---eC-CCHHHHHHHhc
Confidence 45667788999999987 77643 34 47888888875
No 311
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=97.36 E-value=0.00022 Score=55.30 Aligned_cols=58 Identities=10% Similarity=0.142 Sum_probs=48.7
Q ss_pred hHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhC
Q psy1110 16 PLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRN 79 (366)
Q Consensus 16 ~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~ 79 (366)
.+++++. ++.+..|||.. ..++|.+++|+ ||+.+|++|.....|.|. +.++|.+|+.+
T Consensus 44 ~~~~~~~---~~~~~~vd~~~--~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~-~~~~l~~~l~~ 103 (105)
T 3m9j_A 44 SLSEKYS---NVIFLEVDVDD--CQDVASESEVKSMPTFQFFKKGQKVGEFSGA-NKEKLEATINE 103 (105)
T ss_dssp HHHHHST---TSEEEEEETTT--CHHHHHHTTCCBSSEEEEEETTEEEEEEESS-CHHHHHHHHHH
T ss_pred HHHHHcc---CeEEEEEEhhh--hHHHHHHcCCCcCcEEEEEECCeEEEEEeCC-CHHHHHHHHHH
Confidence 4555443 49999999965 55999999999 999999999888889998 99999999865
No 312
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=97.36 E-value=0.00016 Score=56.81 Aligned_cols=60 Identities=10% Similarity=0.082 Sum_probs=50.2
Q ss_pred hHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCc
Q psy1110 16 PLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNP 80 (366)
Q Consensus 16 ~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~ 80 (366)
.+++++. +++.+..|||.. ..++|.+++|+ ||+.+|++|.....+.|. +.+.|.+|+.+.
T Consensus 48 ~~~~~~~--~~~~~~~vd~~~--~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~~ 109 (112)
T 1ep7_A 48 TLSNDYA--GKVIFLKVDVDA--VAAVAEAAGITAMPTFHVYKDGVKADDLVGA-SQDKLKALVAKH 109 (112)
T ss_dssp HHHHHTT--TTSEEEEEETTT--THHHHHHHTCCBSSEEEEEETTEEEEEEESC-CHHHHHHHHHHH
T ss_pred HHHHHcC--CCeEEEEEECCc--hHHHHHHcCCCcccEEEEEECCeEEEEEcCC-CHHHHHHHHHHH
Confidence 4566654 479999999965 55999999999 999999999888888897 899999998754
No 313
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=97.35 E-value=0.00025 Score=57.75 Aligned_cols=67 Identities=12% Similarity=0.229 Sum_probs=53.1
Q ss_pred chHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeee--Eeec-CCccHHHHHHHHhCcCCc
Q psy1110 15 SPLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVK--YVYE-NGNTKDKIIEFVRNPQAT 83 (366)
Q Consensus 15 ~~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~--~~y~-g~r~~~~i~~fi~~~~~~ 83 (366)
..+|+++.....+.++.|||..+ ..+|.+++|+ ||+.+|.+|+.. ..|. |.++.+.|.+|+.+....
T Consensus 48 ~~~~~~~~~~~~~~~~~vd~~~~--~~~~~~~~v~~~Pt~~~~~~g~~~~~~~~~gg~~~~~~l~~~l~~~~~~ 119 (133)
T 2dj3_A 48 TSLGKKYKGQKDLVIAKMDATAN--DITNDQYKVEGFPTIYFAPSGDKKNPIKFEGGNRDLEHLSKFIDEHATK 119 (133)
T ss_dssp HHHHHHHTTSSSEEEEEECTTTS--CCCCSSCCCSSSSEEEEECTTCTTSCEECCSSCCSTTHHHHHHHHHSSS
T ss_pred HHHHHHhcCCCCEEEEEecCCcC--HHHHhhcCCCcCCEEEEEeCCCcccceEecCCCcCHHHHHHHHHHhccc
Confidence 35666766445799999999664 4899999999 999999987543 4677 558999999999887654
No 314
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=97.34 E-value=0.00016 Score=63.71 Aligned_cols=52 Identities=12% Similarity=0.195 Sum_probs=41.1
Q ss_pred hhhhhhccCCeEEEEEECCCChhhhc-ccHHHHHHHHHHhcc-c-cEEEeeccCC
Q psy1110 108 NFDLVIQEESSVLVMFYAPWCGHCKK-LKPEYEEAAATMKQQ-R-AYYGMGMLRH 159 (366)
Q Consensus 108 ~~~~~i~~~k~vlV~F~a~wC~~Ck~-~~p~~e~la~~~~~~-v-~~~~v~~~~~ 159 (366)
++.+++.++..+|+.||+.||+.|.. ..|.|.+.+.+|+.. + .++.|+++..
T Consensus 40 sLsd~~~Gk~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~~~g~d~VigIS~D~~ 94 (176)
T 4f82_A 40 SVRDQVAGKRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLRAAGIDEIWCVSVNDA 94 (176)
T ss_dssp EHHHHHTTCEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHHTTCCEEEEEESSCH
T ss_pred eHHHHhCCCeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHHhCCCCEEEEEeCCCH
Confidence 34455555456677788999999999 999999999999865 7 8888988753
No 315
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=97.32 E-value=0.00033 Score=52.20 Aligned_cols=22 Identities=14% Similarity=0.353 Sum_probs=18.9
Q ss_pred EEEEECCCChhhhcccHHHHHH
Q psy1110 120 LVMFYAPWCGHCKKLKPEYEEA 141 (366)
Q Consensus 120 lV~F~a~wC~~Ck~~~p~~e~l 141 (366)
++.|+++||++|+++.+.+++.
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~ 24 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSK 24 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH
T ss_pred EEEEECCCChhHHHHHHHHHHC
Confidence 5678999999999998888764
No 316
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=97.31 E-value=0.0002 Score=59.13 Aligned_cols=63 Identities=10% Similarity=0.019 Sum_probs=51.3
Q ss_pred hHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEee-ecCeeeEeecCCccHHHHHHHHhCcCCc
Q psy1110 16 PLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQ-KNAEVKYVYENGNTKDKIIEFVRNPQAT 83 (366)
Q Consensus 16 ~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f-~~g~~~~~y~g~r~~~~i~~fi~~~~~~ 83 (366)
.+++++. ..+.++.|||.. ..++|.+++|+ ||+.+| ++|... .|.|.++.+.|.+|+.+....
T Consensus 62 ~l~~~~~--~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~~G~~~-~~~G~~~~~~l~~~l~~~~~~ 127 (136)
T 2l5l_A 62 ELAKEYD--GQIVIYKVDTEK--EQELAGAFGIRSIPSILFIPMEGKPE-MAQGAMPKASFKKAIDEFLLK 127 (136)
T ss_dssp HHHHHTT--TTCEEEEEETTT--CHHHHHHTTCCSSCEEEEECSSSCCE-EEESCCCHHHHHHHHHHHHTS
T ss_pred HHHHHhc--CCEEEEEEeCCC--CHHHHHHcCCCCCCEEEEECCCCcEE-EEeCCCCHHHHHHHHHHHhhc
Confidence 4566655 569999999965 45999999999 999999 566544 789999999999999876554
No 317
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=97.29 E-value=0.00016 Score=63.98 Aligned_cols=46 Identities=17% Similarity=0.406 Sum_probs=40.7
Q ss_pred cCCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCc
Q psy1110 115 EESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHR 160 (366)
Q Consensus 115 ~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~ 160 (366)
++++++|.||.+||+||+.+.|.++++.+++.+++.|..+++.-+.
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~~~v~~~~~p~~~~~ 68 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFKDDMYLRTEHVVWQK 68 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCCTTEEEEEEECCCSG
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCCCCeEEEEecCCCCc
Confidence 3688999999999999999999999999999888888888886544
No 318
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=97.29 E-value=0.00019 Score=57.70 Aligned_cols=32 Identities=19% Similarity=0.664 Sum_probs=24.5
Q ss_pred hhhhhhccCCeEEEEEECCCChhhhcccHHHHHH
Q psy1110 108 NFDLVIQEESSVLVMFYAPWCGHCKKLKPEYEEA 141 (366)
Q Consensus 108 ~~~~~i~~~k~vlV~F~a~wC~~Ck~~~p~~e~l 141 (366)
.+++++++++ ++.|+++||++|+++.+.++++
T Consensus 11 ~~~~~i~~~~--v~vy~~~~Cp~C~~~~~~L~~~ 42 (113)
T 3rhb_A 11 SIRKTVTENT--VVIYSKTWCSYCTEVKTLFKRL 42 (113)
T ss_dssp HHHHHHHHSS--EEEEECTTCHHHHHHHHHHHHT
T ss_pred HHHHHHhcCC--EEEEECCCChhHHHHHHHHHHc
Confidence 3445665555 6669999999999999988765
No 319
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=97.28 E-value=0.00053 Score=59.35 Aligned_cols=65 Identities=12% Similarity=-0.045 Sum_probs=52.5
Q ss_pred chHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeee--E-------eecCCcc-HHHHHHHHhCcCC
Q psy1110 15 SPLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVK--Y-------VYENGNT-KDKIIEFVRNPQA 82 (366)
Q Consensus 15 ~~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~--~-------~y~g~r~-~~~i~~fi~~~~~ 82 (366)
..||+++. +.+.|.+||.++.. +++.+++|+ ||+.+|++|+.. . ...|..+ ++.|++++.....
T Consensus 64 eelA~e~~--~~v~f~kVDVDe~~--e~a~~y~V~siPT~~fFk~G~~v~vd~Gtgd~~k~vGa~~~k~~l~~~ie~~~r 139 (160)
T 2av4_A 64 YKVADDIK--NFCVIYLVDITEVP--DFNTMYELYDPVSVMFFYRNKHMMIDLGTGNNNKINWPMNNKQEFIDIVETIFR 139 (160)
T ss_dssp HHHHHHHT--TTEEEEEEETTTCC--TTTTTTTCCSSEEEEEEETTEEEEEECSSSCCSCBCSCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHcc--CCcEEEEEECCCCH--HHHHHcCCCCCCEEEEEECCEEEEEecCCCCcCeEEeecCCHHHHHHHHHHHHH
Confidence 35677765 67999999997755 999999999 999999999876 3 5778776 8899999876554
Q ss_pred c
Q psy1110 83 T 83 (366)
Q Consensus 83 ~ 83 (366)
.
T Consensus 140 ~ 140 (160)
T 2av4_A 140 G 140 (160)
T ss_dssp H
T ss_pred H
Confidence 3
No 320
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=97.28 E-value=0.00026 Score=56.73 Aligned_cols=61 Identities=16% Similarity=0.094 Sum_probs=50.2
Q ss_pred hHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCcCC
Q psy1110 16 PLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNPQA 82 (366)
Q Consensus 16 ~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~~~ 82 (366)
.+++++. ++.+..|||.. ..++|.+++|+ ||+.+|++|.....|.|.+ .+.|.+|+.+...
T Consensus 58 ~~~~~~~---~~~~~~vd~~~--~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~-~~~l~~~l~~~l~ 120 (122)
T 2vlu_A 58 DLAKKFP---NAVFLKVDVDE--LKPIAEQFSVEAMPTFLFMKEGDVKDRVVGAI-KEELTAKVGLHAA 120 (122)
T ss_dssp HHHHHCT---TSEEEEEETTT--CHHHHHHTTCCSSSEEEEEETTEEEEEEESSC-HHHHHHHHHHHHS
T ss_pred HHHHHCC---CcEEEEEECCC--CHHHHHHcCCCcccEEEEEeCCEEEEEEeCcC-HHHHHHHHHHHhc
Confidence 4555544 39999999965 55999999999 9999999998888899988 9999999976543
No 321
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=97.27 E-value=0.00019 Score=63.58 Aligned_cols=42 Identities=10% Similarity=0.321 Sum_probs=36.2
Q ss_pred CCeEEEEEECCCChhhhcccHHH---HHHHHHHhccccEEEeecc
Q psy1110 116 ESSVLVMFYAPWCGHCKKLKPEY---EEAAATMKQQRAYYGMGML 157 (366)
Q Consensus 116 ~k~vlV~F~a~wC~~Ck~~~p~~---e~la~~~~~~v~~~~v~~~ 157 (366)
+++++|.|+..||+||.++.|.+ .++.+.+.+++.|..++..
T Consensus 21 ~~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~~~v~~~~~~~~ 65 (191)
T 3l9s_A 21 GEPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLPEGTKMTKYHVE 65 (191)
T ss_dssp SSSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSCTTCCEEEEECS
T ss_pred CCCeEEEEECCCChhHHHhChhccchHHHHHhCCCCcEEEEEecc
Confidence 47899999999999999999986 7999999877777777654
No 322
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=97.22 E-value=0.00037 Score=56.31 Aligned_cols=65 Identities=12% Similarity=0.024 Sum_probs=54.4
Q ss_pred chHHHhhcCCCCeEEEEee--ecccCCcchhccCCcc--ceEEeee-cCeeeEeecCCccHHHHHHHHhCcCCc
Q psy1110 15 SPLAKEIVKPKAITLGLIE--RLTEKADPVCTREKAK--KKVRRQK-NAEVKYVYENGNTKDKIIEFVRNPQAT 83 (366)
Q Consensus 15 ~~la~e~~~~~~I~~~~Vd--c~~~~~~~lc~~~~I~--Pti~~f~-~g~~~~~y~g~r~~~~i~~fi~~~~~~ 83 (366)
..+++++. .++.+..|| ++.+ .+++.+++|. ||+.+|. +|.....+.|.++.+.|.+++.+....
T Consensus 49 ~~~~~~~~--~~v~~~~v~~~~d~~--~~~~~~~~v~~~Pt~~~~~~~G~~~~~~~G~~~~~~l~~~l~~~~~~ 118 (126)
T 2l57_A 49 SYVSKERE--GKFNIYYARLEEEKN--IDLAYKYDANIVPTTVFLDKEGNKFYVHQGLMRKNNIETILNSLGVK 118 (126)
T ss_dssp HHHHHHSS--SSCEEEEEETTSSHH--HHHHHHTTCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHHHCCC
T ss_pred HHHHHHhc--CCeEEEEEeCCCCch--HHHHHHcCCcceeEEEEECCCCCEEEEecCCCCHHHHHHHHHHHhcc
Confidence 35666665 679999999 8654 4899999999 9999999 777777889999999999999887665
No 323
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=97.22 E-value=0.00017 Score=57.79 Aligned_cols=64 Identities=14% Similarity=0.157 Sum_probs=51.1
Q ss_pred chHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCC----ccHHHHHHHHhCcCC
Q psy1110 15 SPLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENG----NTKDKIIEFVRNPQA 82 (366)
Q Consensus 15 ~~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~----r~~~~i~~fi~~~~~ 82 (366)
..+++++. +++.++.|||.. ..++|.+++|+ ||+.+|++|+....+.|. ++.+.|.+|+.+...
T Consensus 44 ~~~~~~~~--~~~~~~~vd~~~--~~~~~~~~~v~~~Pt~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l~ 113 (122)
T 3aps_A 44 ELLARMIK--GKVRAGKVDCQA--YPQTCQKAGIKAYPSVKLYQYERAKKSIWEEQINSRDAKTIAALIYGKLE 113 (122)
T ss_dssp HHHHHHHT--TTCEEEEEETTT--CHHHHHHTTCCSSSEEEEEEEEGGGTEEEEEEECCSCHHHHHHHHHHHHH
T ss_pred HHHHHHhc--CCeEEEEEeCcC--CHHHHHHcCCCccceEEEEeCCCccceeeccccCcCCHHHHHHHHHHHHH
Confidence 34666665 579999999955 55999999999 999999877656566664 899999999977554
No 324
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=97.21 E-value=0.00034 Score=54.78 Aligned_cols=59 Identities=5% Similarity=0.045 Sum_probs=46.9
Q ss_pred hHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCc
Q psy1110 16 PLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNP 80 (366)
Q Consensus 16 ~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~ 80 (366)
.+|+++ +++.+..|||.. ..++|.+++|+ ||+.+|++|.....+.|.. .++|.+|+.+.
T Consensus 45 ~~~~~~---~~~~~~~vd~~~--~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~-~~~l~~~l~~~ 105 (107)
T 1gh2_A 45 SMSNKY---PQAVFLEVDVHQ--CQGTAATNNISATPTFQFFRNKVRIDQYQGAD-AVGLEEKIKQH 105 (107)
T ss_dssp HHHHHC---TTSEEEEEETTT--SHHHHHHTTCCSSSEEEEEETTEEEEEEESSC-HHHHHHHHHHH
T ss_pred HHHHHC---CCcEEEEEECcc--CHHHHHhcCCCcccEEEEEECCeEEEEEeCCC-HHHHHHHHHHh
Confidence 455554 469999999955 55999999999 9999999998788888854 45599988653
No 325
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=97.21 E-value=0.00041 Score=56.77 Aligned_cols=60 Identities=5% Similarity=0.049 Sum_probs=49.2
Q ss_pred hHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCcC
Q psy1110 16 PLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNPQ 81 (366)
Q Consensus 16 ~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~~ 81 (366)
.+++++ ++|.|..|||.. ..++|.+++|+ ||+.+|++|.....+.| .+.+.|.+|+.+..
T Consensus 61 ~l~~~~---~~v~~~~vd~d~--~~~l~~~~~v~~~Pt~~i~~~G~~~~~~~G-~~~~~l~~~l~~~l 122 (125)
T 1r26_A 61 KIAYEF---PTVKFAKVDADN--NSEIVSKCRVLQLPTFIIARSGKMLGHVIG-ANPGMLRQKLRDII 122 (125)
T ss_dssp HHHHHC---TTSEEEEEETTT--CHHHHHHTTCCSSSEEEEEETTEEEEEEES-SCHHHHHHHHHHHH
T ss_pred HHHHHC---CCCEEEEEECCC--CHHHHHHcCCCcccEEEEEeCCeEEEEEeC-CCHHHHHHHHHHHh
Confidence 345554 369999999965 55999999999 99999999988888888 68899999987643
No 326
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=97.20 E-value=0.00052 Score=54.34 Aligned_cols=53 Identities=8% Similarity=0.077 Sum_probs=46.4
Q ss_pred CeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCcC
Q psy1110 26 AITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNPQ 81 (366)
Q Consensus 26 ~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~~ 81 (366)
++.+..|||.. ..++|.+++|. ||+.+|++|.....+.|. +.+.|.+|+.+..
T Consensus 57 ~v~~~~vd~~~--~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~~l 111 (112)
T 1syr_A 57 KMVFIKVDVDE--VSEVTEKENITSMPTFKVYKNGSSVDTLLGA-NDSALKQLIEKYA 111 (112)
T ss_dssp TSEEEEEETTT--THHHHHHTTCCSSSEEEEEETTEEEEEEESC-CHHHHHHHHHTTC
T ss_pred CCEEEEEECCC--CHHHHHHcCCCcccEEEEEECCcEEEEEeCC-CHHHHHHHHHHhh
Confidence 59999999965 45899999999 999999999888888898 9999999997643
No 327
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=97.20 E-value=0.00046 Score=53.19 Aligned_cols=51 Identities=6% Similarity=0.088 Sum_probs=44.8
Q ss_pred CeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhC
Q psy1110 26 AITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRN 79 (366)
Q Consensus 26 ~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~ 79 (366)
++.+..|||.. ..++|.+++|. ||+.+|++|.....+.| .+.++|.+|+.+
T Consensus 50 ~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~G-~~~~~l~~~l~~ 102 (104)
T 2vim_A 50 EVEFAKVDVDQ--NEEAAAKYSVTAMPTFVFIKDGKEVDRFSG-ANETKLRETITR 102 (104)
T ss_dssp TSEEEEEETTT--CHHHHHHTTCCSSSEEEEEETTEEEEEEES-SCHHHHHHHHHH
T ss_pred CCEEEEEeccC--CHHHHHHcCCccccEEEEEeCCcEEEEEeC-CCHHHHHHHHHh
Confidence 79999999955 55999999999 99999999988788888 688999999865
No 328
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=97.20 E-value=0.00053 Score=54.91 Aligned_cols=58 Identities=5% Similarity=-0.004 Sum_probs=48.0
Q ss_pred hHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhC
Q psy1110 16 PLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRN 79 (366)
Q Consensus 16 ~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~ 79 (366)
.+++++. ++.+..|||.. ..++|.+++|+ ||+.+|++|.....+.|.. .+.|.+++.+
T Consensus 54 ~~~~~~~---~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~~-~~~l~~~l~~ 113 (114)
T 2oe3_A 54 KLIQAYP---DVRFVKCDVDE--SPDIAKECEVTAMPTFVLGKDGQLIGKIIGAN-PTALEKGIKD 113 (114)
T ss_dssp HHHHHCT---TSEEEEEETTT--CHHHHHHTTCCSBSEEEEEETTEEEEEEESSC-HHHHHHHHHT
T ss_pred HHHHHCC---CCEEEEEECCC--CHHHHHHCCCCcccEEEEEeCCeEEEEEeCCC-HHHHHHHHHh
Confidence 3455543 39999999965 45999999999 9999999998888899988 8999999864
No 329
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=97.18 E-value=0.00045 Score=55.12 Aligned_cols=64 Identities=11% Similarity=0.211 Sum_probs=50.6
Q ss_pred chHHHhhcC---CCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCee--eEeecCCccHHHHHHHHhCcCCc
Q psy1110 15 SPLAKEIVK---PKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEV--KYVYENGNTKDKIIEFVRNPQAT 83 (366)
Q Consensus 15 ~~la~e~~~---~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~--~~~y~g~r~~~~i~~fi~~~~~~ 83 (366)
..+|+++.. ...+.++.|||..+. +|. +|+ ||+.+|++|+. ...|.|.++.++|.+|+.+....
T Consensus 48 ~~~~~~~~~~~~~~~v~~~~vd~~~~~---~~~--~v~~~Pt~~~~~~~~~~~~~~~~G~~~~~~l~~~i~~~~~~ 118 (121)
T 2djj_A 48 EELGALYAKSEFKDRVVIAKVDATAND---VPD--EIQGFPTIKLYPAGAKGQPVTYSGSRTVEDLIKFIAENGKY 118 (121)
T ss_dssp HHHHHHHTTSSCTTSSEEEEEETTTSC---CSS--CCSSSSEEEEECSSCTTSCCCCCCCSCHHHHHHHHHHTSSS
T ss_pred HHHHHHHhhcccCCceEEEEEECcccc---ccc--ccCcCCeEEEEeCcCCCCceEecCCCCHHHHHHHHHhccCc
Confidence 356777663 237999999996543 776 888 99999998755 67899999999999999876553
No 330
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=97.16 E-value=0.00039 Score=55.40 Aligned_cols=59 Identities=10% Similarity=0.043 Sum_probs=47.6
Q ss_pred HHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhC
Q psy1110 18 AKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRN 79 (366)
Q Consensus 18 a~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~ 79 (366)
-+++.+.-++.+..|||.. ..++|.+++|+ ||+.+|++|.....+.| .+.+.|.+++.+
T Consensus 55 ~~~~~~~~~~~~~~vd~~~--~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G-~~~~~l~~~l~~ 115 (117)
T 2xc2_A 55 FKELSEKYDAIFVKVDVDK--LEETARKYNISAMPTFIAIKNGEKVGDVVG-ASIAKVEDMIKK 115 (117)
T ss_dssp HHHHHTTSSSEEEEEETTT--SHHHHHHTTCCSSSEEEEEETTEEEEEEES-SCHHHHHHHHHH
T ss_pred HHHHHHHcCcEEEEEECCc--cHHHHHHcCCCccceEEEEeCCcEEEEEeC-CCHHHHHHHHHH
Confidence 3344432379999999955 55999999999 99999999988888888 688899999865
No 331
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=97.13 E-value=0.00056 Score=63.42 Aligned_cols=63 Identities=10% Similarity=0.072 Sum_probs=53.2
Q ss_pred hHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCcCC
Q psy1110 16 PLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNPQA 82 (366)
Q Consensus 16 ~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~~~ 82 (366)
.+++++. +++.|++|||+. ..++|.+++|+ ||+.+|++|.....|.|.++.+.+..|+.....
T Consensus 50 ~~~~~~~--~~~~~~~vd~~~--~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~g~~~~~~l~~~l~~~lp 114 (287)
T 3qou_A 50 SLAAQYN--GQFILAKLDCDA--EQMIAAQFGLRAIPTVYLFQNGQPVDGFQGPQPEEAIRALLDXVLP 114 (287)
T ss_dssp HHHHHHT--SSSEEEEEETTT--CHHHHHTTTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHSC
T ss_pred HHHHHcC--CCeEEEEEeCcc--CHHHHHHcCCCCCCeEEEEECCEEEEEeeCCCCHHHHHHHHHHHcC
Confidence 4455554 569999999966 44999999999 999999999888889999999999999987653
No 332
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=97.12 E-value=0.00051 Score=54.34 Aligned_cols=58 Identities=7% Similarity=0.012 Sum_probs=47.6
Q ss_pred hHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhC
Q psy1110 16 PLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRN 79 (366)
Q Consensus 16 ~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~ 79 (366)
.+++++ .++.+..|||.. ..++|.+++|+ ||+.+|++|.....+.|. +.++|.+++.+
T Consensus 48 ~l~~~~---~~~~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G~-~~~~l~~~i~~ 107 (109)
T 3f3q_A 48 KFSEQY---PQADFYKLDVDE--LGDVAQKNEVSAMPTLLLFKNGKEVAKVVGA-NPAAIKQAIAA 107 (109)
T ss_dssp HHHHHC---TTSEEEEEETTT--CHHHHHHTTCCSSSEEEEEETTEEEEEEESS-CHHHHHHHHHH
T ss_pred HHHHHC---CCCEEEEEECCC--CHHHHHHcCCCccCEEEEEECCEEEEEEeCC-CHHHHHHHHHh
Confidence 344444 359999999965 55999999999 999999999888888887 66899999865
No 333
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=96.19 E-value=7.2e-05 Score=57.79 Aligned_cols=60 Identities=15% Similarity=0.087 Sum_probs=49.4
Q ss_pred hHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhC
Q psy1110 16 PLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRN 79 (366)
Q Consensus 16 ~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~ 79 (366)
.+++++. .++.+..|||.. ..++|.+++|+ ||+.+|++|.....|.|.++.++|.+|+.+
T Consensus 43 ~~~~~~~--~~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g~~~~~~l~~~l~~ 104 (106)
T 2yj7_A 43 ELAKEYE--GKVKVVKVNVDE--NPNTAAQYGIRSIPTLLLFKNGQVVDRLVGAQPKEALKERIDK 104 (106)
Confidence 4444444 479999999966 44999999999 999999888877888999999999998865
No 334
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=97.11 E-value=0.00078 Score=53.33 Aligned_cols=69 Identities=3% Similarity=0.033 Sum_probs=53.6
Q ss_pred CCchHHHhhcCC-CCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCcCCc
Q psy1110 13 DTSPLAKEIVKP-KAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNPQAT 83 (366)
Q Consensus 13 ~~~~la~e~~~~-~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~~~~ 83 (366)
...+...++.+. .++.+..||+.. ..++|.+++|+ ||+.+|++|.....+.|.++.+.|.+++.....+
T Consensus 36 ~~~~~l~~~~~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~G~~v~~~~G~~~~~~l~~~~~~~~~~ 107 (110)
T 2l6c_A 36 NMEKVLDKFGARAPQVAISSVDSEA--RPELMKELGFERVPTLVFIRDGKVAKVFSGIMNPRELQALYASIHHH 107 (110)
T ss_dssp HHHHHHHHHHTTCTTSCEEEEEGGG--CHHHHHHTTCCSSCEEEEEESSSEEEEEESCCCHHHHHHHHHTC---
T ss_pred HHHHHHHHHHHHCCCcEEEEEcCcC--CHHHHHHcCCcccCEEEEEECCEEEEEEcCCCCHHHHHHHHHHHhhh
Confidence 334444444432 369999999965 55999999999 9999999998888899999999999999886553
No 335
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=97.11 E-value=0.00061 Score=57.92 Aligned_cols=81 Identities=17% Similarity=0.118 Sum_probs=65.1
Q ss_pred chHHHhhcCCCCeEEEEeeecccCCcchhccCCcc----ceEEeeec-C-eeeEeec-CCccHHHHHHHHhCcCCcchhh
Q psy1110 15 SPLAKEIVKPKAITLGLIERLTEKADPVCTREKAK----KKVRRQKN-A-EVKYVYE-NGNTKDKIIEFVRNPQATSEEV 87 (366)
Q Consensus 15 ~~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~----Pti~~f~~-g-~~~~~y~-g~r~~~~i~~fi~~~~~~~~~~ 87 (366)
.++|+++. ++|.|+.||...+.+..+...+|+. |+++++.. + ..++.+. ++.+.++|.+|+.+...++++|
T Consensus 55 ~~vAk~fk--gki~Fv~vd~~~~~~~~~l~~fGl~~~~~P~v~i~~~~~~~~Ky~~~~~~~t~~~i~~Fv~d~l~GkL~p 132 (147)
T 3bj5_A 55 KTAAESFK--GKILFAFIDSDHTDNQRILEFFGLKKEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIKP 132 (147)
T ss_dssp HHHHHTTT--TTCEEEEECTTCGGGHHHHHHTTCCGGGCSEEEEEECSSSCEEECCSCCCCCHHHHHHHHHHHHTTCSCE
T ss_pred HHHHHHcC--CceEEEEEecchHhHHHHHHHcCCCcccCCEEEEEecccccccCCCCcccCCHHHHHHHHHHHHcCCccc
Confidence 45677776 7899999998544555688889998 99999875 2 3355555 7889999999999999999999
Q ss_pred hccCCCcCCC
Q psy1110 88 KKKEQDWADT 97 (366)
Q Consensus 88 ~~~~~~~~~~ 97 (366)
..+++++|..
T Consensus 133 ~~KSEpiPe~ 142 (147)
T 3bj5_A 133 HLMSQELPED 142 (147)
T ss_dssp EECCSCCCGG
T ss_pred cccCCCCCCC
Confidence 9999988753
No 336
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=97.06 E-value=0.00085 Score=53.03 Aligned_cols=26 Identities=23% Similarity=0.417 Sum_probs=21.8
Q ss_pred CCeEEEEEECCCChhhhcccHHHHHH
Q psy1110 116 ESSVLVMFYAPWCGHCKKLKPEYEEA 141 (366)
Q Consensus 116 ~k~vlV~F~a~wC~~Ck~~~p~~e~l 141 (366)
++..++.|+++||++|+++.+.++++
T Consensus 20 ~~~~v~ly~~~~Cp~C~~ak~~L~~~ 45 (103)
T 3nzn_A 20 DRGKVIMYGLSTCVWCKKTKKLLTDL 45 (103)
T ss_dssp CCSCEEEEECSSCHHHHHHHHHHHHH
T ss_pred CCCeEEEEcCCCCchHHHHHHHHHHc
Confidence 34457779999999999999998876
No 337
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=97.05 E-value=0.00066 Score=57.39 Aligned_cols=63 Identities=10% Similarity=-0.004 Sum_probs=51.4
Q ss_pred hHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeee---------EeecC-CccHHHHHHHHhCcCC
Q psy1110 16 PLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVK---------YVYEN-GNTKDKIIEFVRNPQA 82 (366)
Q Consensus 16 ~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~---------~~y~g-~r~~~~i~~fi~~~~~ 82 (366)
.+++++. ..+.+..||+++.. +++.+++|. ||+.+|++|... ..+.| .++.++|.+++.....
T Consensus 47 ~l~~~~~--~~~~~~~vd~d~~~--~l~~~~~v~~~Pt~~~~~~G~~v~~~~g~~~~~~~~G~~~~~~~l~~~l~~~~~ 121 (149)
T 3gix_A 47 KTSSDLS--KMAAIYLVDVDQTA--VYTQYFDISYIPSTVFFFNGQHMKVDYGSPDHTKFVGSFKTKQDFIDLIEVIYR 121 (149)
T ss_dssp HHHTTTT--TTEEEEEEETTTCC--HHHHHTTCCSSSEEEEEETTEEEEEECSSSCCSCEESCCSSHHHHHHHHHHHHH
T ss_pred HHHHHcc--CceEEEEEECCcCH--HHHHHcCCCccCeEEEEECCeEEEeecCCCCCCeEeeecCCHHHHHHHHHHHHH
Confidence 3455544 45999999996644 999999999 999999999877 67888 8899999999977543
No 338
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=97.01 E-value=0.00062 Score=53.87 Aligned_cols=26 Identities=12% Similarity=0.227 Sum_probs=21.8
Q ss_pred CCeEEEEEECCCChhhhcccHHHHHH
Q psy1110 116 ESSVLVMFYAPWCGHCKKLKPEYEEA 141 (366)
Q Consensus 116 ~k~vlV~F~a~wC~~Ck~~~p~~e~l 141 (366)
...-++.|+++||++|+++...++++
T Consensus 14 ~~~~v~vy~~~~Cp~C~~ak~~L~~~ 39 (99)
T 3qmx_A 14 VSAKIEIYTWSTCPFCMRALALLKRK 39 (99)
T ss_dssp CCCCEEEEECTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCChhHHHHHHHHHHC
Confidence 34557779999999999999998876
No 339
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=97.01 E-value=0.00098 Score=52.41 Aligned_cols=62 Identities=3% Similarity=0.039 Sum_probs=47.8
Q ss_pred hHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCcC
Q psy1110 16 PLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNPQ 81 (366)
Q Consensus 16 ~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~~ 81 (366)
.+++++.. .++.+..|||.. ..++|.+++|+ ||+.+|++|.....+.|... ++|.+++.+..
T Consensus 45 ~~~~~~~~-~~~~~~~vd~~~--~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~~-~~l~~~l~~~~ 108 (112)
T 3d6i_A 45 AISNEPSN-SNVSFLSIDADE--NSEISELFEISAVPYFIIIHKGTILKELSGADP-KEYVSLLEDCK 108 (112)
T ss_dssp HHHHCGGG-TTSEEEEEETTT--CHHHHHHTTCCSSSEEEEEETTEEEEEECSCCH-HHHHHHHHHHH
T ss_pred HHHHhcCC-CCEEEEEEeccc--CHHHHHHcCCCcccEEEEEECCEEEEEecCCCH-HHHHHHHHHHH
Confidence 34444422 469999999955 55999999999 99999999988888888754 45888887543
No 340
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.99 E-value=0.0024 Score=56.13 Aligned_cols=38 Identities=11% Similarity=0.038 Sum_probs=29.8
Q ss_pred cccccccCCeEEEe-cC---CceeeecCCCCCHHHHHHHHhC
Q psy1110 283 KRFDIKGFPTLKYF-RA---GSVAFDAGHLRDASRLVEFMRD 320 (366)
Q Consensus 283 ~~~~I~~~Ptl~~f-k~---G~~~~~~~g~~~~e~l~~fi~~ 320 (366)
+.+++++||++.++ +. ++++.+..|..++++|++.+.+
T Consensus 124 ~~~~~~~~P~l~ii~~~~~~~~vl~~~~G~~~~~~ll~~L~~ 165 (178)
T 2ec4_A 124 RTQKTDQFPLFLIIMGKRSSNEVLNVIQGNTTVDELMMRLMA 165 (178)
T ss_dssp HHSCSTTCSEEEEECCCSSCCCEEEEECSCCCHHHHHHHHHH
T ss_pred hhcCCCCCCeEEEEEcCCCceEEEEEEeCCCCHHHHHHHHHH
Confidence 34899999999988 22 3567888999999998877653
No 341
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=96.98 E-value=0.00037 Score=56.23 Aligned_cols=51 Identities=6% Similarity=-0.016 Sum_probs=45.0
Q ss_pred eEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCc
Q psy1110 27 ITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNP 80 (366)
Q Consensus 27 I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~ 80 (366)
+.+..|||+. ..++|.+++|+ ||+.+|++|.....+.|. +.++|.+|+.+.
T Consensus 67 v~~~~vd~d~--~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~~ 119 (121)
T 2j23_A 67 VGFYKVDVDE--QSQIAQEVGIRAMPTFVFFKNGQKIDTVVGA-DPSKLQAAITQH 119 (121)
T ss_dssp SEEEEEETTT--CHHHHHHHTCCSSSEEEEEETTEEEEEEESS-CHHHHHHHHHHH
T ss_pred EEEEEEECcC--CHHHHHHcCCCcccEEEEEECCeEEeeEcCC-CHHHHHHHHHHh
Confidence 9999999965 55999999999 999999999888888898 899999998753
No 342
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=96.97 E-value=0.001 Score=54.07 Aligned_cols=52 Identities=8% Similarity=0.016 Sum_probs=44.9
Q ss_pred CeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCc
Q psy1110 26 AITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNP 80 (366)
Q Consensus 26 ~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~ 80 (366)
++.+..||++. ..++|.+++|+ ||+.+|++|.....+.| .+.+.|.+++.+.
T Consensus 69 ~v~~~~vd~d~--~~~l~~~~~v~~~Pt~~~~~~G~~~~~~~G-~~~~~l~~~l~~~ 122 (124)
T 1xfl_A 69 NVLFLKVDTDE--LKSVASDWAIQAMPTFMFLKEGKILDKVVG-AKKDELQSTIAKH 122 (124)
T ss_dssp SEEEEEEETTT--SHHHHHHTTCCSSSEEEEEETTEEEEEEES-CCHHHHHHHHHHH
T ss_pred CcEEEEEECcc--CHHHHHHcCCCccCEEEEEECCEEEEEEeC-CCHHHHHHHHHHh
Confidence 69999999965 45999999999 99999999987778888 5888999998653
No 343
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=96.97 E-value=0.00022 Score=62.88 Aligned_cols=43 Identities=12% Similarity=0.283 Sum_probs=37.8
Q ss_pred CCeEEEEEECCCChhhhcccHHH---HHHHHHHhccccEEEeeccC
Q psy1110 116 ESSVLVMFYAPWCGHCKKLKPEY---EEAAATMKQQRAYYGMGMLR 158 (366)
Q Consensus 116 ~k~vlV~F~a~wC~~Ck~~~p~~---e~la~~~~~~v~~~~v~~~~ 158 (366)
+++++|.||+.||+||+.+.|.+ +++.+.+.+++.|+.++..-
T Consensus 14 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 59 (189)
T 3l9v_A 14 DAPAVVEFFSFYCPPCYAFSQTMGVDQAIRHVLPQGSRMVKYHVSL 59 (189)
T ss_dssp TCCSEEEEECTTCHHHHHHHHTSCHHHHHHTTCCTTCCEEEEECSS
T ss_pred CCCEEEEEECCCChhHHHHhHhccchHHHHHhCCCCCEEEEEechh
Confidence 46889999999999999999987 68888888888999888765
No 344
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=96.96 E-value=0.00051 Score=55.04 Aligned_cols=33 Identities=18% Similarity=0.452 Sum_probs=24.1
Q ss_pred hhhhhhhccCCeEEEEEEC-----CCChhhhcccHHHHHH
Q psy1110 107 DNFDLVIQEESSVLVMFYA-----PWCGHCKKLKPEYEEA 141 (366)
Q Consensus 107 ~~~~~~i~~~k~vlV~F~a-----~wC~~Ck~~~p~~e~l 141 (366)
+.+++++++++ ++ .|+. +||++|++....++++
T Consensus 6 ~~~~~~i~~~~-vv-vy~~g~~~~~~Cp~C~~ak~~L~~~ 43 (109)
T 1wik_A 6 SGLKVLTNKAS-VM-LFMKGNKQEAKCGFSKQILEILNST 43 (109)
T ss_dssp CCHHHHHTTSS-EE-EEESSTTTCCCSSTHHHHHHHHHHT
T ss_pred HHHHHHhccCC-EE-EEEecCCCCCCCchHHHHHHHHHHc
Confidence 45677776655 34 4666 9999999998888654
No 345
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=96.94 E-value=0.00061 Score=52.23 Aligned_cols=23 Identities=17% Similarity=0.460 Sum_probs=19.2
Q ss_pred EEEEEECCCChhhhcccHHHHHH
Q psy1110 119 VLVMFYAPWCGHCKKLKPEYEEA 141 (366)
Q Consensus 119 vlV~F~a~wC~~Ck~~~p~~e~l 141 (366)
.++.|+++||++|+++.+.+++.
T Consensus 7 ~v~ly~~~~C~~C~~~~~~L~~~ 29 (92)
T 2khp_A 7 DVIIYTRPGCPYCARAKALLARK 29 (92)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHT
T ss_pred cEEEEECCCChhHHHHHHHHHHc
Confidence 36789999999999988887754
No 346
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=96.91 E-value=0.0015 Score=48.50 Aligned_cols=66 Identities=14% Similarity=0.249 Sum_probs=48.4
Q ss_pred cCCCCCCchHHHhhcC--CCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhC
Q psy1110 8 TLNKEDTSPLAKEIVK--PKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRN 79 (366)
Q Consensus 8 ~~~~~~~~~la~e~~~--~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~ 79 (366)
+-.+....+.-+++.+ ++++.+..||+.++. +++.++||+ ||+.+ +|.. .+.|..+.+.|.+++.+
T Consensus 14 C~~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~~--~~~~~~~v~~~Pt~~~--~G~~--~~~G~~~~~~l~~~l~~ 83 (85)
T 1fo5_A 14 CPHCPAAKRVVEEVANEMPDAVEVEYINVMENP--QKAMEYGIMAVPTIVI--NGDV--EFIGAPTKEALVEAIKK 83 (85)
T ss_dssp SSCCCTHHHHHHHHHHHCSSSEEEEEEESSSSC--CTTTSTTTCCSSEEEE--TTEE--ECCSSSSSHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHcCCceEEEEEECCCCH--HHHHHCCCcccCEEEE--CCEE--eeecCCCHHHHHHHHHH
Confidence 3344444444444332 147999999996654 899999999 99988 6654 78898899999999865
No 347
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=96.81 E-value=0.0024 Score=53.44 Aligned_cols=63 Identities=6% Similarity=-0.023 Sum_probs=46.9
Q ss_pred hHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeE---------eecCCc-cHHHHHHHHhCcCC
Q psy1110 16 PLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKY---------VYENGN-TKDKIIEFVRNPQA 82 (366)
Q Consensus 16 ~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~---------~y~g~r-~~~~i~~fi~~~~~ 82 (366)
.+++++. +.+.+..||++++. ++|.+++|+ ||+.+|++|.... .+.|.. +.+.|++++.....
T Consensus 47 ~l~~~~~--~~v~~~~vd~d~~~--~~~~~~~i~~~Pt~~~~~~G~~v~~~~g~~~~~~~~g~~~~~~~l~~~i~~~~~ 121 (142)
T 1qgv_A 47 SIAEKVK--NFAVIYLVDITEVP--DFNKMYELYDPCTVMFFFRNKHIMIDLGTGNNNKINWAMEDKQEMVDIIETVYR 121 (142)
T ss_dssp HHHHHHT--TTEEEEEEETTTCC--TTTTSSCSCSSCEEEEEETTEEEEEECC------CCSCCSCHHHHHHHHHHHHH
T ss_pred HHHHHhC--CCeEEEEEccccCH--HHHHHcCCCCCCEEEEEECCcEEEEecCCCCcceeeeecCcHHHHHHHHHHHHH
Confidence 4666665 57999999996654 999999999 9999999887654 233444 37788888766443
No 348
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=96.81 E-value=0.00066 Score=59.63 Aligned_cols=40 Identities=15% Similarity=0.259 Sum_probs=35.9
Q ss_pred CCeEEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeecc
Q psy1110 116 ESSVLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGML 157 (366)
Q Consensus 116 ~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~ 157 (366)
+++++|.||..||+||+++.|.++++.+.+ ++.|.++++.
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~--~v~~~~~p~~ 61 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFLPVISQEA--GTDIGKMHIT 61 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGHHHHHHHH--TSCCEEEECC
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHHh--CCeEEEEecc
Confidence 578999999999999999999999999998 5777777765
No 349
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=96.81 E-value=0.0013 Score=51.95 Aligned_cols=54 Identities=11% Similarity=-0.044 Sum_probs=46.1
Q ss_pred CeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCcCC
Q psy1110 26 AITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNPQA 82 (366)
Q Consensus 26 ~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~~~ 82 (366)
++.+..||+.. ..++|.+++|+ ||+.+|++|.....+.| .+.+.|.+++.+...
T Consensus 59 ~~~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g-~~~~~l~~~l~~~~~ 114 (118)
T 2vm1_A 59 GAIFLKVDVDE--LKDVAEAYNVEAMPTFLFIKDGEKVDSVVG-GRKDDIHTKIVALMG 114 (118)
T ss_dssp TSEEEEEETTT--SHHHHHHTTCCSBSEEEEEETTEEEEEEES-CCHHHHHHHHHHHHC
T ss_pred CcEEEEEEccc--CHHHHHHcCCCcCcEEEEEeCCeEEEEecC-CCHHHHHHHHHHHhc
Confidence 79999999955 55999999999 99999998887777888 588899999977544
No 350
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=96.78 E-value=0.00076 Score=64.76 Aligned_cols=58 Identities=9% Similarity=0.090 Sum_probs=39.2
Q ss_pred CCCcCCCCCceEEecchhhhhhhccCCeEEEEEE-CCCChhhhcccHHHHHHHHHHhccccEEEeeccC
Q psy1110 91 EQDWADTESEVVHLTDDNFDLVIQEESSVLVMFY-APWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLR 158 (366)
Q Consensus 91 ~~~~~~~~~~v~~l~~~~~~~~i~~~k~vlV~F~-a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~ 158 (366)
+..+++..+..+.|++. .++++++.|| +.||+.|....+.|.+ .....+.++.|++|.
T Consensus 6 ~F~l~~~~G~~~~Lsd~-------~Gk~vvl~F~p~~~tp~C~~e~~~~~~---~~~~~~~v~gis~D~ 64 (322)
T 4eo3_A 6 HFELLTDEGKTFTHVDL-------YGKYTILFFFPKAGTSGSTREAVEFSR---ENFEKAQVVGISRDS 64 (322)
T ss_dssp CCEEEETTSCEEEGGGT-------TTSEEEEEECSSTTSHHHHHHHHHHHH---SCCTTEEEEEEESCC
T ss_pred CcEEECCCcCEEeHHHh-------CCCeEEEEEECCCCCCCCHHHHHHHHH---HhhCCCEEEEEeCCC
Confidence 33445566666677664 6789999999 4689999877666643 222347778888754
No 351
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=96.78 E-value=0.0014 Score=49.47 Aligned_cols=23 Identities=22% Similarity=0.322 Sum_probs=18.9
Q ss_pred EEEEEECCCChhhhcccHHHHHH
Q psy1110 119 VLVMFYAPWCGHCKKLKPEYEEA 141 (366)
Q Consensus 119 vlV~F~a~wC~~Ck~~~p~~e~l 141 (366)
.++.|+++||++|+++...++++
T Consensus 5 ~v~ly~~~~Cp~C~~~~~~L~~~ 27 (89)
T 3msz_A 5 KVKIYTRNGCPYCVWAKQWFEEN 27 (89)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHT
T ss_pred EEEEEEcCCChhHHHHHHHHHHc
Confidence 37778999999999988877654
No 352
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=96.77 E-value=0.0017 Score=48.11 Aligned_cols=65 Identities=11% Similarity=0.127 Sum_probs=47.5
Q ss_pred CCCCCchHHHhhcC--CCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCc
Q psy1110 10 NKEDTSPLAKEIVK--PKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNP 80 (366)
Q Consensus 10 ~~~~~~~la~e~~~--~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~ 80 (366)
.+....+..+++.+ ++++.+..||+..+ .+++.++||+ ||+.+ +|.. .+.|..+.+.|.+++.+.
T Consensus 15 ~C~~~~~~l~~~~~~~~~~~~~~~vd~~~~--~~~~~~~~v~~~Pt~~~--~G~~--~~~G~~~~~~l~~~l~~~ 83 (85)
T 1nho_A 15 YCPMAIEVVDEAKKEFGDKIDVEKIDIMVD--REKAIEYGLMAVPAIAI--NGVV--RFVGAPSREELFEAINDE 83 (85)
T ss_dssp CSTTHHHHHHHHHHHHCSSCCEEEECTTTC--GGGGGGTCSSCSSEEEE--TTTE--EEECSSCCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCCeEEEEEECCCC--HHHHHhCCceeeCEEEE--CCEE--EEccCCCHHHHHHHHHHH
Confidence 34444443333332 15799999999664 4999999999 99987 6654 778988999999998753
No 353
>3bj5_A Protein disulfide-isomerase; thioredoxin fold, chaperone, endoplasmic reticulum, isomeras membrane, redox-active center; 2.20A {Homo sapiens}
Probab=96.77 E-value=0.0054 Score=51.92 Aligned_cols=49 Identities=14% Similarity=0.277 Sum_probs=37.2
Q ss_pred ceEEecchhhhhhhccCCeEEEEEECCCC-hhhhcccHHHHHHHHHHhcc
Q psy1110 100 EVVHLTDDNFDLVIQEESSVLVMFYAPWC-GHCKKLKPEYEEAAATMKQQ 148 (366)
Q Consensus 100 ~v~~l~~~~~~~~i~~~k~vlV~F~a~wC-~~Ck~~~p~~e~la~~~~~~ 148 (366)
-|.++|.+|...+..++.++++.++..-. ..-..+.+.++++|+.|+++
T Consensus 15 LV~e~t~en~~~~~~~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~fkgk 64 (147)
T 3bj5_A 15 LVIEFTEQTAPKIFGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGK 64 (147)
T ss_dssp CEEECCTTTHHHHHSSSCCEEEEEECCTTSSSHHHHHHHHHHHHHTTTTT
T ss_pred eeEEeccccHHHHhcCCCceEEEEEecCCcHhHHHHHHHHHHHHHHcCCc
Confidence 68999999999998888777766565422 23445778889999988877
No 354
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=96.76 E-value=0.0012 Score=53.40 Aligned_cols=33 Identities=18% Similarity=0.457 Sum_probs=25.0
Q ss_pred hhhhhhhccCCeEEEEEECCCChhhhcccHHHHHH
Q psy1110 107 DNFDLVIQEESSVLVMFYAPWCGHCKKLKPEYEEA 141 (366)
Q Consensus 107 ~~~~~~i~~~k~vlV~F~a~wC~~Ck~~~p~~e~l 141 (366)
+.+++++++++ ++.|+.+||++|++..+.++++
T Consensus 8 ~~~~~~i~~~~--v~vy~~~~Cp~C~~ak~~L~~~ 40 (114)
T 3h8q_A 8 RHLVGLIERSR--VVIFSKSYCPHSTRVKELFSSL 40 (114)
T ss_dssp HHHHHHHHHCS--EEEEECTTCHHHHHHHHHHHHT
T ss_pred HHHHHHhccCC--EEEEEcCCCCcHHHHHHHHHHc
Confidence 45667776555 3349999999999998888764
No 355
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=96.73 E-value=0.0018 Score=53.16 Aligned_cols=61 Identities=7% Similarity=-0.008 Sum_probs=49.6
Q ss_pred hHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCcCC
Q psy1110 16 PLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNPQA 82 (366)
Q Consensus 16 ~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~~~ 82 (366)
.+++++ +++.+..|||.. ..++|.++||+ ||+.+|++|.....+.|. +.+.|.+++.+...
T Consensus 70 ~l~~~~---~~v~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~-~~~~l~~~l~~~~~ 132 (139)
T 3d22_A 70 ELSENY---PSLMFLVIDVDE--LSDFSASWEIKATPTFFFLRDGQQVDKLVGA-NKPELHKKITAILD 132 (139)
T ss_dssp HHHHHC---TTSEEEEEETTT--SHHHHHHTTCCEESEEEEEETTEEEEEEESC-CHHHHHHHHHHHHH
T ss_pred HHHHHC---CCCEEEEEeCcc--cHHHHHHcCCCcccEEEEEcCCeEEEEEeCC-CHHHHHHHHHHHhc
Confidence 345444 369999999965 55999999999 999999989888888887 78899999976544
No 356
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.72 E-value=0.00039 Score=57.30 Aligned_cols=62 Identities=11% Similarity=0.087 Sum_probs=49.2
Q ss_pred hHHHhhcCCCCeEEEEeeecccCCcchhccCCc-------c-ceEEeeecCeeeEeecCCccHHHHHHHHhCc
Q psy1110 16 PLAKEIVKPKAITLGLIERLTEKADPVCTREKA-------K-KKVRRQKNAEVKYVYENGNTKDKIIEFVRNP 80 (366)
Q Consensus 16 ~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I-------~-Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~ 80 (366)
.+|+++. ..++.|+.|||.. ..++|.+++| . ||+.+|++|.....+.|.++.+.|.+|+.+.
T Consensus 50 ~l~~~~~-~~~v~~~~vd~~~--~~~~~~~~~v~~~~~~~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~~~ 119 (137)
T 2dj0_A 50 DLSLKYN-CTGLNFGKVDVGR--YTDVSTRYKVSTSPLTKQLPTLILFQGGKEAMRRPQIDKKGRAVSWTFSE 119 (137)
T ss_dssp HHHHHHC-SSSCEEEECCTTT--CHHHHHHTTCCCCSSSSCSSEEEEESSSSEEEEESCBCSSSCBCCCCCCH
T ss_pred HHHHHhC-CCCeEEEEEeCcc--CHHHHHHccCcccCCcCCCCEEEEEECCEEEEEecCcCchHHHHHHHhcc
Confidence 3455554 1379999999955 5599999999 4 9999999998888899988888887777553
No 357
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=96.72 E-value=0.00085 Score=54.25 Aligned_cols=66 Identities=8% Similarity=0.008 Sum_probs=52.4
Q ss_pred hHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEee-ecCeeeEeecCCccHHHHHHHHhCcCCc
Q psy1110 16 PLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQ-KNAEVKYVYENGNTKDKIIEFVRNPQAT 83 (366)
Q Consensus 16 ~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f-~~g~~~~~y~g~r~~~~i~~fi~~~~~~ 83 (366)
.+++.+. ..+.+..|||.......+|.+++|. ||+.+| ++|.....+.|.++.+.|.+|+.+...+
T Consensus 54 ~~~~~~~--~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~G~~~~~~~G~~~~~~l~~~l~~~~~~ 122 (130)
T 2kuc_A 54 LVADYFN--RHFVNLKMDMEKGEGVELRKKYGVHAYPTLLFINSSGEVVYRLVGAEDAPELLKKVKLGVES 122 (130)
T ss_dssp HHHHHHH--HHSEEEEECSSSTTHHHHHHHTTCCSSCEEEEECTTSCEEEEEESCCCHHHHHHHHHHHHSC
T ss_pred HHHHHHh--cCeEEEEEecCCcchHHHHHHcCCCCCCEEEEECCCCcEEEEecCCCCHHHHHHHHHHHHHh
Confidence 3444444 5688999999643455899999999 999999 5777777889999999999999876654
No 358
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=96.72 E-value=0.0014 Score=51.32 Aligned_cols=52 Identities=12% Similarity=0.034 Sum_probs=44.6
Q ss_pred CeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCc
Q psy1110 26 AITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNP 80 (366)
Q Consensus 26 ~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~ 80 (366)
++.+..||+.. ..+++.+++|+ ||+.+|++|.....+.| .+.+.|.+++.+.
T Consensus 57 ~v~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~g-~~~~~l~~~l~~~ 110 (113)
T 1ti3_A 57 NVTFLKVDVDE--LKAVAEEWNVEAMPTFIFLKDGKLVDKTVG-ADKDGLPTLVAKH 110 (113)
T ss_dssp SEEEEEEETTT--CHHHHHHHHCSSTTEEEEEETTEEEEEEEC-CCTTHHHHHHHHH
T ss_pred CcEEEEEEccc--cHHHHHhCCCCcccEEEEEeCCEEEEEEec-CCHHHHHHHHHHh
Confidence 69999999955 55999999999 99999998887777888 6888999988653
No 359
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=96.71 E-value=0.0012 Score=54.32 Aligned_cols=66 Identities=8% Similarity=-0.008 Sum_probs=53.3
Q ss_pred hHHHhhcCCCCeEEEEeee---------cccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCcCCc
Q psy1110 16 PLAKEIVKPKAITLGLIER---------LTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNPQAT 83 (366)
Q Consensus 16 ~la~e~~~~~~I~~~~Vdc---------~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~~~~ 83 (366)
|.-.++.+..++.|..||| .... ++|.+++|+ ||+.+|++|.....+.|.++.+.+..++++....
T Consensus 51 p~l~~l~~~~~v~~~~vd~~~~~~~~~~d~~~--~l~~~~~v~~~Pt~~~~~~G~~v~~~~G~~~~~~~~~~i~~~~~~ 127 (135)
T 3emx_A 51 PQLIQASKEVDVPIVMFIWGSLIGERELSAAR--LEMNKAGVEGTPTLVFYKEGRIVDKLVGATPWSLKVEKAREIYGG 127 (135)
T ss_dssp HHHHHHHTTCCSCEEEEEECTTCCHHHHHHHH--HHHHHHTCCSSSEEEEEETTEEEEEEESCCCHHHHHHHHHHHC--
T ss_pred hhHHHHHHHCCCEEEEEECCCchhhhhhhhhH--HHHHHcCCceeCeEEEEcCCEEEEEEeCCCCHHHHHHHHHHHhCC
Confidence 4444555443499999999 6644 899999999 9999999998888999999999999999887665
No 360
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=96.67 E-value=0.006 Score=55.31 Aligned_cols=46 Identities=13% Similarity=0.041 Sum_probs=40.7
Q ss_pred cCCeEEEEEE-CCCChhhhcccHHHHHHHHHHhcc-ccEEEeeccCCc
Q psy1110 115 EESSVLVMFY-APWCGHCKKLKPEYEEAAATMKQQ-RAYYGMGMLRHR 160 (366)
Q Consensus 115 ~~k~vlV~F~-a~wC~~Ck~~~p~~e~la~~~~~~-v~~~~v~~~~~~ 160 (366)
.++.+++.|| ++||+.|....+.|.+.+..|++. +.++.|++|...
T Consensus 51 ~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~~~g~~vigiS~Ds~~ 98 (216)
T 3sbc_A 51 KGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFEEQGAQVLFASTDSEY 98 (216)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHHHTTEEEEEEESSCHH
T ss_pred CCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhccCCceEEEeecCchh
Confidence 4789999999 899999999999999999999875 889999987643
No 361
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=96.65 E-value=0.0015 Score=51.33 Aligned_cols=59 Identities=14% Similarity=0.158 Sum_probs=46.6
Q ss_pred hHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhC
Q psy1110 16 PLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRN 79 (366)
Q Consensus 16 ~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~ 79 (366)
.+++++. ++.+..|||.. ...++|.+++|+ ||+.+|++|.....+.|.. .+.|.+++.+
T Consensus 48 ~~~~~~~---~v~~~~vd~~~-~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~-~~~l~~~l~~ 108 (111)
T 2pu9_C 48 KLAEEYL---DVIFLKLDCNQ-ENKTLAKELGIRVVPTFKILKENSVVGEVTGAK-YDKLLEAIQA 108 (111)
T ss_dssp HHHHHCT---TSEEEEEECSS-TTHHHHHHHCCSBSSEEEEESSSSEEEEEESSC-HHHHHHHHHH
T ss_pred HHHHHCC---CeEEEEEecCc-chHHHHHHcCCCeeeEEEEEeCCcEEEEEcCCC-HHHHHHHHHH
Confidence 3444443 59999999952 245899999999 9999999998777888874 8889998865
No 362
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=96.61 E-value=0.0013 Score=52.40 Aligned_cols=62 Identities=10% Similarity=0.061 Sum_probs=45.0
Q ss_pred hHHHhhcCCCCeEEEEeeecc--cCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhC
Q psy1110 16 PLAKEIVKPKAITLGLIERLT--EKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRN 79 (366)
Q Consensus 16 ~la~e~~~~~~I~~~~Vdc~~--~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~ 79 (366)
.+++++. ..+.+..++... ....+++.++||+ ||+.+|++|.....+.|.++.+.|.+|+.+
T Consensus 53 ~~~~~~~--~~v~~~~~~~~~~~~~~~~~~~~~~i~~~Pt~~~~~~G~~~~~~~G~~~~~~l~~~l~k 118 (118)
T 1zma_A 53 GVVAETK--AHIYFINSEEPSQLNDLQAFRSRYGIPTVPGFVHITDGQINVRCDSSMSAQEIKDFAGL 118 (118)
T ss_dssp HHHHHHC--CCCEEEETTCGGGHHHHHHHHHHHTCCSSCEEEEEETTEEEEECCTTCCHHHHHHHHTC
T ss_pred HHHHhcC--CeEEEEECCCcCcHHHHHHHHHHcCCCCCCeEEEEECCEEEEEecCCCCHHHHHHHhhC
Confidence 3455443 445555333211 2234799999999 999999999888889999999999999853
No 363
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=96.58 E-value=0.0027 Score=50.86 Aligned_cols=53 Identities=9% Similarity=0.104 Sum_probs=44.4
Q ss_pred CeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCc
Q psy1110 26 AITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNP 80 (366)
Q Consensus 26 ~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~ 80 (366)
++.+..|||.. ...++|.+++|+ ||+.+|++|.....+.|.. .++|.+++.+.
T Consensus 68 ~~~~~~vd~~~-~~~~~~~~~~v~~~Pt~~~~~~G~~~~~~~G~~-~~~l~~~i~~~ 122 (124)
T 1faa_A 68 DVIFLKLDCNQ-ENKTLAKELGIRVVPTFKILKENSVVGEVTGAK-YDKLLEAIQAA 122 (124)
T ss_dssp TSEEEEEECSS-TTHHHHHHHCCSSSSEEEEEETTEEEEEEESSC-HHHHHHHHHHH
T ss_pred CCEEEEEecCc-chHHHHHHcCCCeeeEEEEEeCCcEEEEEcCCC-HHHHHHHHHHh
Confidence 59999999952 245899999999 9999999998888888876 88899988653
No 364
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=96.58 E-value=0.00077 Score=55.98 Aligned_cols=34 Identities=15% Similarity=0.321 Sum_probs=24.4
Q ss_pred chhhhhhhccCCeEEEEEECCCChhhhcc-cHHHHHH
Q psy1110 106 DDNFDLVIQEESSVLVMFYAPWCGHCKKL-KPEYEEA 141 (366)
Q Consensus 106 ~~~~~~~i~~~k~vlV~F~a~wC~~Ck~~-~p~~e~l 141 (366)
.+.+++++...+ ++.|+.+||++|++. .+.++++
T Consensus 27 ~~~v~~~i~~~~--Vvvy~~~~Cp~C~~a~k~~L~~~ 61 (129)
T 3ctg_A 27 VAHVKDLIGQKE--VFVAAKTYCPYCKATLSTLFQEL 61 (129)
T ss_dssp HHHHHHHHHHSS--EEEEECTTCHHHHHHHHHHHTTS
T ss_pred HHHHHHHHcCCC--EEEEECCCCCchHHHHHHHHHhc
Confidence 345666666554 667899999999988 6666543
No 365
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=96.50 E-value=0.0021 Score=51.60 Aligned_cols=62 Identities=8% Similarity=0.010 Sum_probs=47.9
Q ss_pred hHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeec----CeeeEeecCCccHHHHHHHHhCcCCc
Q psy1110 16 PLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKN----AEVKYVYENGNTKDKIIEFVRNPQAT 83 (366)
Q Consensus 16 ~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~----g~~~~~y~g~r~~~~i~~fi~~~~~~ 83 (366)
.+++++ .++.|..|||.. ..++|.+++|+ ||+.+|++ |.....+.|..+. +|.+.+.+...+
T Consensus 47 ~l~~~~---~~v~~~~vd~~~--~~~~~~~~~i~~~Pt~~~~~~~~~~G~~~~~~~G~~~~-~l~~~~~~~~~~ 114 (118)
T 2f51_A 47 SIAEAN---KDVTFIKVDVDK--NGNAADAYGVSSIPALFFVKKEGNEIKTLDQFVGADVS-RIKADIEKFKHH 114 (118)
T ss_dssp HHHHHC---TTSEEEEEETTT--CHHHHHHTTCCSSSEEEEEEEETTEEEEEEEEESCCHH-HHHHHHHHHC--
T ss_pred HHHHHC---CCeEEEEEECCC--CHHHHHhcCCCCCCEEEEEeCCCCcceEEEeecCCCHH-HHHHHHHHhhhc
Confidence 455555 579999999965 55999999999 99999998 7777788887654 488888776554
No 366
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=96.43 E-value=0.0028 Score=49.66 Aligned_cols=32 Identities=19% Similarity=0.261 Sum_probs=21.7
Q ss_pred ccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCC
Q psy1110 286 DIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPT 322 (366)
Q Consensus 286 ~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~ 322 (366)
+.+.+|++++ .+|+.+.. .+.++|.++|.+..
T Consensus 52 G~~tVP~I~i-~Dg~~l~~----~~~~el~~~L~el~ 83 (92)
T 2lqo_A 52 GNRTVPTVKF-ADGSTLTN----PSADEVKAKLVKIA 83 (92)
T ss_dssp SSSCSCEEEE-TTSCEEES----CCHHHHHHHHHHHH
T ss_pred CCCEeCEEEE-eCCEEEeC----CCHHHHHHHHHHhc
Confidence 5678999865 77875432 36677877776544
No 367
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=96.43 E-value=0.0029 Score=51.99 Aligned_cols=65 Identities=14% Similarity=0.007 Sum_probs=49.9
Q ss_pred chHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeee--cCe--eeEeecCCccHHHHHHHHhCcCC
Q psy1110 15 SPLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQK--NAE--VKYVYENGNTKDKIIEFVRNPQA 82 (366)
Q Consensus 15 ~~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~--~g~--~~~~y~g~r~~~~i~~fi~~~~~ 82 (366)
.+.-+++.+.-++.+..|||.. ..++|.+++|+ ||+.+|+ +|. ....+.|. +.+.|.+++.+...
T Consensus 59 ~p~l~~l~~~~~v~~~~vd~~~--~~~l~~~~~v~~~Pt~~~~~~~~g~g~~~~~~~G~-~~~~l~~~l~~~l~ 129 (133)
T 3cxg_A 59 KEYFKNQLNYYYVTLVDIDVDI--HPKLNDQHNIKALPTFEFYFNLNNEWVLVHTVEGA-NQNDIEKAFQKYCL 129 (133)
T ss_dssp HHHHHGGGGTEECEEEEEETTT--CHHHHHHTTCCSSSEEEEEEEETTEEEEEEEEESC-CHHHHHHHHHHHSE
T ss_pred HHHHHHHHHhcCEEEEEEeccc--hHHHHHhcCCCCCCEEEEEEecCCCeEEEEEEcCC-CHHHHHHHHHHHHH
Confidence 3444455543469999999965 55999999999 9999996 776 55677786 78999999977554
No 368
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=95.42 E-value=0.00051 Score=55.69 Aligned_cols=66 Identities=6% Similarity=0.008 Sum_probs=52.1
Q ss_pred hHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEee--ecCee--eEeecCCccHHHHHHHHhCcCCc
Q psy1110 16 PLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQ--KNAEV--KYVYENGNTKDKIIEFVRNPQAT 83 (366)
Q Consensus 16 ~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f--~~g~~--~~~y~g~r~~~~i~~fi~~~~~~ 83 (366)
.+++.+. ..+.+..|||......++|.+++|+ ||+.+| ++|.. ...+.|.++.+.|.+++.+....
T Consensus 46 ~~~~~~~--~~~~~~~vd~~~~~~~~~~~~~~v~~~Pt~~~~d~~~G~~~~~~~~~G~~~~~~l~~~l~~~~~~ 117 (130)
T 2lst_A 46 GVSRLLE--ARFVVASVSVDTPEGQELARRYRVPGTPTFVFLVPKAGAWEEVGRLFGSRPRAEFLKELRQVCVK 117 (130)
Confidence 4444444 4689999999655556899999999 999999 45666 66788999999999999887654
No 369
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=96.33 E-value=0.00065 Score=68.56 Aligned_cols=65 Identities=9% Similarity=0.064 Sum_probs=49.9
Q ss_pred chHHHhhcCCC------CeEEEEeeecccCCcchhccCCcc--ceEEeeecCee--eEeecCCccHHHHHHHHhCcCC
Q psy1110 15 SPLAKEIVKPK------AITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEV--KYVYENGNTKDKIIEFVRNPQA 82 (366)
Q Consensus 15 ~~la~e~~~~~------~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~--~~~y~g~r~~~~i~~fi~~~~~ 82 (366)
..||+++.... .|.|++|||+.+ .++|.+++|+ ||+.+|++|+. ...|.|.|+.+.| .|+.+...
T Consensus 65 ~~la~~~~~~~g~~~~~~v~f~~VD~d~~--~~la~~y~V~~~PTlilf~~gg~~~~~~y~G~r~~e~L-~fI~k~l~ 139 (470)
T 3qcp_A 65 SKFAGGLKVEHGKDALQIATAAAVNCASE--VDLCRKYDINFVPRLFFFYPRDSCRSNEECGTSSLEHV-AFENSHLE 139 (470)
T ss_dssp HHHHHTSCCSSCSSGGGGCEEEEEETTTC--HHHHHHTTCCSSCEEEEEEESSCCCTTSCCCCCCEEEE-ECSCTTCC
T ss_pred HHHHHHHhhhcccccCceEEEEEEECCCC--HHHHHHcCCCccCeEEEEECCCceEEEEeeCCCCHHHH-HHHHHhcC
Confidence 35666665332 499999999664 5999999999 99999986643 5688998888877 77766554
No 370
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=96.32 E-value=0.0029 Score=51.41 Aligned_cols=60 Identities=13% Similarity=0.116 Sum_probs=49.0
Q ss_pred hHHHhhcCCCCeEEEEeee---cccCCcchhccCCc---c--ceEEee-ecCeeeEeecC-------CccHHHHHHHHhC
Q psy1110 16 PLAKEIVKPKAITLGLIER---LTEKADPVCTREKA---K--KKVRRQ-KNAEVKYVYEN-------GNTKDKIIEFVRN 79 (366)
Q Consensus 16 ~la~e~~~~~~I~~~~Vdc---~~~~~~~lc~~~~I---~--Pti~~f-~~g~~~~~y~g-------~r~~~~i~~fi~~ 79 (366)
.+++++. .++.+..||+ .... +++.+++| . ||+.+| ++|.....+.| .++.+.|.+|+.+
T Consensus 55 ~~~~~~~--~~~~~~~vd~~~~~~~~--~l~~~~~v~~~~~~Pt~~~~d~~G~~~~~~~g~~~~~~~~~~~~~l~~~l~~ 130 (133)
T 3fk8_A 55 KNTALIA--KHFEVVKIDVGNFDRNL--ELSQAYGDPIQDGIPAVVVVNSDGKVRYTTKGGELANARKMSDQGIYDFFAK 130 (133)
T ss_dssp HHHHHHH--HHCEEEEEECTTTTSSH--HHHHHTTCGGGGCSSEEEEECTTSCEEEECCSCTTTTGGGSCHHHHHHHHHH
T ss_pred HHHHHhc--CCEEEEEEeCCcccchH--HHHHHhCCccCCccceEEEECCCCCEEEEecCCcccccccCCHHHHHHHHHH
Confidence 5666665 5799999999 6644 89999999 8 999999 67877777777 5688999999864
No 371
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=96.19 E-value=0.0051 Score=55.51 Aligned_cols=54 Identities=9% Similarity=0.044 Sum_probs=45.5
Q ss_pred CCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccH-------HHHHHHHhCcC
Q psy1110 25 KAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTK-------DKIIEFVRNPQ 81 (366)
Q Consensus 25 ~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~-------~~i~~fi~~~~ 81 (366)
..|+|+.|||. ..++|.+++|. ||+.+|++|.....|.|.++. +.|..|+.+..
T Consensus 150 ~~v~f~~vd~~---~~~l~~~~~i~~~PTl~~~~~G~~v~~~~G~~~~~g~~~~~~~Le~~L~~~g 212 (217)
T 2trc_P 150 PMVKFCKIRAS---NTGAGDRFSSDVLPTLLVYKGGELISNFISVAEQFAEDFFAADVESFLNEYG 212 (217)
T ss_dssp TTSEEEEEEHH---HHTCSTTSCGGGCSEEEEEETTEEEEEETTGGGGSCSSCCHHHHHHHHHTTT
T ss_pred CCeEEEEEECC---cHHHHHHCCCCCCCEEEEEECCEEEEEEeCCcccCcccCCHHHHHHHHHHcC
Confidence 47999999996 34799999999 999999999888888886664 88999997643
No 372
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=96.11 E-value=0.0012 Score=53.10 Aligned_cols=73 Identities=10% Similarity=-0.017 Sum_probs=54.1
Q ss_pred cCCCCCCchHHHhhcCC-CCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCcCCc
Q psy1110 8 TLNKEDTSPLAKEIVKP-KAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNPQAT 83 (366)
Q Consensus 8 ~~~~~~~~~la~e~~~~-~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~~~~ 83 (366)
|-.+....+.-.++.+. .++.+..|||.. ..++|.+++|+ ||+.+|++|.....+.| .+.+.|.+++.+....
T Consensus 48 C~~C~~~~~~l~~~~~~~~~v~~~~v~~~~--~~~~~~~~~v~~~Pt~~~~~~g~~~~~~~g-~~~~~l~~~l~~~~~~ 123 (130)
T 1wmj_A 48 CGPCRFIAPVFAEYAKKFPGAVFLKVDVDE--LKEVAEKYNVEAMPTFLFIKDGAEADKVVG-ARKDDLQNTIVKHVGA 123 (130)
T ss_dssp CSCSSSSHHHHHHHHHHCTTBCCEECCTTT--SGGGHHHHTCCSSCCCCBCTTTTCCBCCCT-TCTTTHHHHHHHHTSS
T ss_pred ChhHHHHHHHHHHHHHHCCCCEEEEEeccc--hHHHHHHcCCCccceEEEEeCCeEEEEEeC-CCHHHHHHHHHHHHhc
Confidence 34444454544444422 369999999955 55999999999 99999988877777778 5788999999876654
No 373
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=96.07 E-value=0.0044 Score=50.73 Aligned_cols=64 Identities=6% Similarity=-0.035 Sum_probs=49.1
Q ss_pred chHHHhhcCCCCeEEEEeeecc--cCCcchhccCCcc--ceEEee-ecCeee--EeecCCccHHHHHHHHhCcC
Q psy1110 15 SPLAKEIVKPKAITLGLIERLT--EKADPVCTREKAK--KKVRRQ-KNAEVK--YVYENGNTKDKIIEFVRNPQ 81 (366)
Q Consensus 15 ~~la~e~~~~~~I~~~~Vdc~~--~~~~~lc~~~~I~--Pti~~f-~~g~~~--~~y~g~r~~~~i~~fi~~~~ 81 (366)
..+++++. ++.+..|||.. ....++|.+++|. ||+.+| ++|... ..+.|.++.+.|.+++....
T Consensus 57 ~~l~~~~~---~~~~~~vd~~~~~~~~~~l~~~~~v~~~Pt~~~~d~~G~~v~~~~~~G~~~~~~l~~~l~~~~ 127 (134)
T 2fwh_A 57 PQVQKALA---DTVLLQANVTANDAQDVALLKHLNVLGLPTILFFDGQGQEHPQARVTGFMDAETFSAHLRDRQ 127 (134)
T ss_dssp HHHHHHTT---TSEEEEEECTTCCHHHHHHHHHTTCCSSSEEEEECTTSCBCGGGCBCSCCCHHHHHHHHHHC-
T ss_pred HHHHHHhc---CcEEEEEeCCCCcchHHHHHHHcCCCCCCEEEEECCCCCEeeeeeeeeccCHHHHHHHHHhcC
Confidence 35666654 49999999943 1244899999999 999999 566655 57899999999999997643
No 374
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=96.03 E-value=0.014 Score=47.43 Aligned_cols=57 Identities=7% Similarity=-0.023 Sum_probs=44.5
Q ss_pred hHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecC-------CccHHHHHHHHhCc
Q psy1110 16 PLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYEN-------GNTKDKIIEFVRNP 80 (366)
Q Consensus 16 ~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g-------~r~~~~i~~fi~~~ 80 (366)
.||+++ +.++|.+||+++ .+.+++|+ ||+.+|++|.....+.| ..+.++|..++.+.
T Consensus 47 ~la~~~---~~v~f~kvd~d~-----~~~~~~v~~~PT~~~fk~G~~v~~~~G~~~~gg~~~~~~~le~~L~~~ 112 (118)
T 3evi_A 47 LLARKF---PETKFVKAIVNS-----CIQHYHDNCLPTIFVYKNGQIEAKFIGIIECGGINLKLEELEWKLAEV 112 (118)
T ss_dssp HHHHHC---TTSEEEEEEGGG-----TSTTCCGGGCSEEEEEETTEEEEEEESTTTTTCSSCCHHHHHHHHHTT
T ss_pred HHHHHC---CCCEEEEEEhHH-----hHHHCCCCCCCEEEEEECCEEEEEEeChhhhCCCCCCHHHHHHHHHHc
Confidence 455554 369999999954 26899999 99999999988877766 34788888888653
No 375
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=95.95 E-value=0.009 Score=48.85 Aligned_cols=55 Identities=4% Similarity=-0.158 Sum_probs=47.4
Q ss_pred eEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCcC
Q psy1110 27 ITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNPQ 81 (366)
Q Consensus 27 I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~~ 81 (366)
+.+.+||...+...+++.+++|. ||+.+|++|+....+.|-...+.|..|+....
T Consensus 53 ~~l~~vdv~~~~~~~la~~~~V~g~PT~i~f~~G~ev~Ri~G~~~~~~f~~~L~~~l 109 (116)
T 3dml_A 53 APVQRLQMRDPLPPGLELARPVTFTPTFVLMAGDVESGRLEGYPGEDFFWPMLARLI 109 (116)
T ss_dssp SCEEEEETTSCCCTTCBCSSCCCSSSEEEEEETTEEEEEEECCCCHHHHHHHHHHHH
T ss_pred ceEEEEECCCCCchhHHHHCCCCCCCEEEEEECCEEEeeecCCCCHHHHHHHHHHHH
Confidence 67888888666445899999999 99999999998889999999999999997643
No 376
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=95.89 E-value=0.0076 Score=48.62 Aligned_cols=58 Identities=7% Similarity=-0.076 Sum_probs=43.6
Q ss_pred HHHhhcCCCCeEEEEeee-------cccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhC
Q psy1110 17 LAKEIVKPKAITLGLIER-------LTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRN 79 (366)
Q Consensus 17 la~e~~~~~~I~~~~Vdc-------~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~ 79 (366)
+++++. +++.|..||+ .... +++.+++|+ ||+.+|+++.....+.| .+.+.|.+|+.+
T Consensus 56 ~~~~~~--~~~~~~~vd~~~~~~~~d~~~--~~~~~~~i~~~Pt~~~~~~~~~~~g~~~-~~~~~l~~~i~~ 122 (123)
T 1wou_A 56 GLKHIS--EGCVFIYCQVGEKPYWKDPNN--DFRKNLKVTAVPTLLKYGTPQKLVESEC-LQANLVEMLFSE 122 (123)
T ss_dssp HGGGCC--TTEEEEEEECCCHHHHHCTTC--HHHHHHCCCSSSEEEETTSSCEEEGGGG-GCHHHHHHHHHC
T ss_pred HHHHcC--CCcEEEEEECCCchhhhchhH--HHHHHCCCCeeCEEEEEcCCceEecccc-CCHHHHHHHHhc
Confidence 444443 5899999999 5544 899999999 99999998655444444 567888888864
No 377
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=95.80 E-value=0.022 Score=50.57 Aligned_cols=41 Identities=12% Similarity=0.201 Sum_probs=32.8
Q ss_pred CCeEEEEEECCCChhhhcccHHH-HHHHHHHh--ccccEEEeec
Q psy1110 116 ESSVLVMFYAPWCGHCKKLKPEY-EEAAATMK--QQRAYYGMGM 156 (366)
Q Consensus 116 ~k~vlV~F~a~wC~~Ck~~~p~~-e~la~~~~--~~v~~~~v~~ 156 (366)
.+..+|.|+...|++|+++.+.+ ..+.+.|. +++.|+..+.
T Consensus 29 a~vtvvef~D~~CP~C~~~~~~~~~~l~~~~~~~g~v~~~~~~~ 72 (202)
T 3gha_A 29 APVTVVEFGDYKCPSCKVFNSDIFPKIQKDFIDKGDVKFSFVNV 72 (202)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTTSEEEEEEEC
T ss_pred CCEEEEEEECCCChhHHHHHHHhhHHHHHHhccCCeEEEEEEec
Confidence 57889999999999999999876 67777784 4577776664
No 378
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=95.26 E-value=0.027 Score=46.27 Aligned_cols=58 Identities=7% Similarity=-0.058 Sum_probs=45.0
Q ss_pred hHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCc-------cHHHHHHHHhCcC
Q psy1110 16 PLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGN-------TKDKIIEFVRNPQ 81 (366)
Q Consensus 16 ~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r-------~~~~i~~fi~~~~ 81 (366)
.||+++ ..++|+.||+.. + ..+++|+ ||+.+|++|.....+.|.. +.+.|..++.+..
T Consensus 54 ~la~~~---~~v~~~~vd~~~--~---~~~~~i~~~Pt~~~~~~G~~v~~~~G~~~~~~~~~~~~~l~~~l~~~~ 120 (135)
T 2dbc_A 54 VLARKF---PETKFVKAIVNS--C---IEHYHDNCLPTIFVYKNGQIEGKFIGIIECGGINLKLEELEWKLSEVG 120 (135)
T ss_dssp HHHHHC---SSEEEEEECCSS--S---CSSCCSSCCSEEEEESSSSCSEEEESTTTTTCTTCCHHHHHHHHHHHT
T ss_pred HHHHHC---CCcEEEEEEhhc--C---cccCCCCCCCEEEEEECCEEEEEEEeEEeeCCCcCCHHHHHHHHHHcC
Confidence 355544 469999999944 2 3789999 9999999998777777754 7889999997753
No 379
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=95.13 E-value=0.0035 Score=50.54 Aligned_cols=65 Identities=9% Similarity=-0.045 Sum_probs=49.3
Q ss_pred CCCCCCchHHHhhcCCCCeEEEEeeecccCCcchhccCCcc-ceEEeeecCeeeEeecCCccHHHHHHHH
Q psy1110 9 LNKEDTSPLAKEIVKPKAITLGLIERLTEKADPVCTREKAK-KKVRRQKNAEVKYVYENGNTKDKIIEFV 77 (366)
Q Consensus 9 ~~~~~~~~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~-Pti~~f~~g~~~~~y~g~r~~~~i~~fi 77 (366)
-.++.+.++-++++...+|.+..||.+++. ++..++|++ |+|.+|.+|+.. +.|..+.+.|.+|+
T Consensus 41 ~~C~~a~~~L~~l~~e~~i~~~~vDId~d~--~l~~~ygv~VP~l~~~~dG~~v--~~g~~~~~~L~~~L 106 (107)
T 2fgx_A 41 HLCEEMIASLRVLQKKSWFELEVINIDGNE--HLTRLYNDRVPVLFAVNEDKEL--CHYFLDSDVIGAYL 106 (107)
T ss_dssp HHHHHHHHHHHHHHHHSCCCCEEEETTTCH--HHHHHSTTSCSEEEETTTTEEE--ECSSCCCHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhcCCeEEEEECCCCH--HHHHHhCCCCceEEEEECCEEE--EecCCCHHHHHHHh
Confidence 334455566666554445999999996644 899999999 999999888654 45788999999887
No 380
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=94.94 E-value=0.031 Score=40.41 Aligned_cols=50 Identities=14% Similarity=0.123 Sum_probs=37.7
Q ss_pred HHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCc-cHHHHHHHH
Q psy1110 17 LAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGN-TKDKIIEFV 77 (366)
Q Consensus 17 la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r-~~~~i~~fi 77 (366)
+++++. ..+.+..|| ..+++.++||+ ||+.+ +|..... |.+ +.+.|.+|+
T Consensus 24 ~~~~~~--~~~~~~~v~-----~~~~~~~~~v~~~Pt~~~--~G~~~~~--G~~~~~~~l~~~l 76 (77)
T 1ilo_A 24 AVKELG--IDAEFEKIK-----EMDQILEAGLTALPGLAV--DGELKIM--GRVASKEEIKKIL 76 (77)
T ss_dssp HHHHTT--CCEEEEEEC-----SHHHHHHHTCSSSSCEEE--TTEEEEC--SSCCCHHHHHHHC
T ss_pred HHHHcC--CceEEEEec-----CHHHHHHCCCCcCCEEEE--CCEEEEc--CCCCCHHHHHHHh
Confidence 344444 579999998 23799999999 99987 6654333 887 899998886
No 381
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=94.62 E-value=0.035 Score=43.99 Aligned_cols=46 Identities=13% Similarity=0.124 Sum_probs=36.0
Q ss_pred Eeeeccc----CCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCcC
Q psy1110 31 LIERLTE----KADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNPQ 81 (366)
Q Consensus 31 ~Vdc~~~----~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~~ 81 (366)
.|||... ...++|.++||+ ||+.+ +|. .|.|.++.++|.+|+.-..
T Consensus 43 ~v~~~~~~~~~~~~~l~~~~~V~~~PT~~i--~G~---~~~G~~~~~~l~~~~~~~~ 94 (106)
T 3kp8_A 43 YVECSPNGPGTPQAQECTEAGITSYPTWII--NGR---TYTGVRSLEALAVASGYPL 94 (106)
T ss_dssp EEESCTTCTTSCCCHHHHHTTCCSSSEEEE--TTE---EEESCCCHHHHHHHHTCCC
T ss_pred EEEEecccccchhHHHHHHcCCeEeCEEEE--CCE---EecCCCCHHHHHHHhCCcc
Confidence 6777621 345899999999 99877 664 4899999999999985543
No 382
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=94.54 E-value=0.053 Score=49.90 Aligned_cols=61 Identities=13% Similarity=0.034 Sum_probs=47.1
Q ss_pred hHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCC-------ccHHHHHHHHhCcCC
Q psy1110 16 PLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENG-------NTKDKIIEFVRNPQA 82 (366)
Q Consensus 16 ~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~-------r~~~~i~~fi~~~~~ 82 (366)
.||+++. .|+|++||+.. .++|.+++|. ||+.+|++|.....+.|. ++.+.|..|+.+...
T Consensus 157 ~La~~~~---~v~f~kVd~d~---~~l~~~~~I~~~PTll~~~~G~~v~~~vG~~~~~g~~~~~e~Le~~L~~~g~ 226 (245)
T 1a0r_P 157 CLAAEYP---MVKFCKIKASN---TGAGDRFSSDVLPTLLVYKGGELLSNFISVTEQLAEEFFTGDVESFLNEYGL 226 (245)
T ss_dssp HHHHHCT---TSEEEEEEHHH---HCCTTSSCTTTCSEEEEEETTEEEEEETTGGGGSCTTCCHHHHHHHHHTTTC
T ss_pred HHHHHCC---CCEEEEEeCCc---HHHHHHCCCCCCCEEEEEECCEEEEEEeCCcccccccccHHHHHHHHHHcCC
Confidence 3555543 59999999965 3699999999 999999998776666552 467789999987543
No 383
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=94.31 E-value=0.04 Score=49.98 Aligned_cols=47 Identities=9% Similarity=0.179 Sum_probs=41.4
Q ss_pred cCCeEEEEEE-CCCChhhhcccHHHHHHHHHHhcc-ccEEEeeccCCcc
Q psy1110 115 EESSVLVMFY-APWCGHCKKLKPEYEEAAATMKQQ-RAYYGMGMLRHRP 161 (366)
Q Consensus 115 ~~k~vlV~F~-a~wC~~Ck~~~p~~e~la~~~~~~-v~~~~v~~~~~~~ 161 (366)
.++.+++.|| ++||+.|......|.+++..|++. +.++.|++|...+
T Consensus 55 ~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~~~g~~vigiS~Ds~~s 103 (219)
T 3tue_A 55 KGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFNELNCEVLACSIDSEYA 103 (219)
T ss_dssp TTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHHTTTEEEEEEESSCHHH
T ss_pred CCCEEEEEEecccCCCCCchhHhhHHHHHhhhccCCcEEEEeeCCchhh
Confidence 5788999999 789999999999999999999876 9999999986543
No 384
>3l9v_A Putative thiol-disulfide isomerase or thioredoxin; thioredoxin-fold, SRGA, thiol-disulfide oxidoreductase, ISOM oxidoreductase; HET: PE8 P4C P6G; 2.15A {Salmonella enterica subsp} SCOP: c.47.1.0
Probab=94.23 E-value=0.0092 Score=52.25 Aligned_cols=25 Identities=16% Similarity=0.401 Sum_probs=18.4
Q ss_pred ccccccccCCeEEEecCCceeeecCCC
Q psy1110 282 GKRFDIKGFPTLKYFRAGSVAFDAGHL 308 (366)
Q Consensus 282 ~~~~~I~~~Ptl~~fk~G~~~~~~~g~ 308 (366)
...++|+|+||+++ +|+....-.+.
T Consensus 138 a~~~gv~GtPt~~v--ng~~~v~~~~~ 162 (189)
T 3l9v_A 138 FKEYGVRGTPSVYV--RGRYHINNAAF 162 (189)
T ss_dssp HHHTTCCSSSEEEE--TTTEEECGGGC
T ss_pred HHHhCCCccCEEEE--CCEEEECcccc
Confidence 45667999999998 89866555443
No 385
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=94.17 E-value=0.083 Score=46.27 Aligned_cols=46 Identities=20% Similarity=0.336 Sum_probs=35.7
Q ss_pred cCCeEEEEEE-CCCChhhh-cccHHHHHHHHHH-hcc-cc-EEEeeccCCc
Q psy1110 115 EESSVLVMFY-APWCGHCK-KLKPEYEEAAATM-KQQ-RA-YYGMGMLRHR 160 (366)
Q Consensus 115 ~~k~vlV~F~-a~wC~~Ck-~~~p~~e~la~~~-~~~-v~-~~~v~~~~~~ 160 (366)
.++.+++.|| +.||+.|. ...+.|.+.+.++ +.. +. ++.++++...
T Consensus 42 ~gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f~~~~g~~~V~gvS~D~~~ 92 (182)
T 1xiy_A 42 NNKKILLISLPGAFTPTCSTKMIPGYEEEYDYFIKENNFDDIYCITNNDIY 92 (182)
T ss_dssp TTCEEEEEECSCTTCHHHHHTHHHHHHHTHHHHHTTSCCSEEEEEESSCHH
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHhCCCcEEEEEeCCCHH
Confidence 3566777776 46999999 8999999999999 655 64 8888887643
No 386
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=94.14 E-value=0.14 Score=45.94 Aligned_cols=37 Identities=16% Similarity=0.306 Sum_probs=27.3
Q ss_pred EEEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcc
Q psy1110 119 VLVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRP 161 (366)
Q Consensus 119 vlV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~ 161 (366)
.++.|..+||++|++.+..+++. .+.+..++++++..
T Consensus 171 ~i~ly~~~~Cp~C~~a~~~L~~~------~i~~~~~~i~~~~~ 207 (241)
T 1nm3_A 171 SISIFTKPGCPFCAKAKQLLHDK------GLSFEEIILGHDAT 207 (241)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHH------TCCCEEEETTTTCC
T ss_pred eEEEEECCCChHHHHHHHHHHHc------CCceEEEECCCchH
Confidence 36678899999999998888764 35566677766543
No 387
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=94.08 E-value=0.05 Score=45.59 Aligned_cols=64 Identities=5% Similarity=-0.078 Sum_probs=48.4
Q ss_pred chHHHhhcCCCCeEEEEeeecccC---------CcchhccCCcc--ceEEee-ecCeeeEeecCCc--cHHHHHHHHhCc
Q psy1110 15 SPLAKEIVKPKAITLGLIERLTEK---------ADPVCTREKAK--KKVRRQ-KNAEVKYVYENGN--TKDKIIEFVRNP 80 (366)
Q Consensus 15 ~~la~e~~~~~~I~~~~Vdc~~~~---------~~~lc~~~~I~--Pti~~f-~~g~~~~~y~g~r--~~~~i~~fi~~~ 80 (366)
..+++.+. ..+.+..||+.... ..+++.+++|. ||+.+| ++|.....+ |.+ +.+.+++++.+.
T Consensus 74 ~~~~~~~~--~~~~~v~vd~~~~~~~~~~~~~~~~~l~~~~~v~~~Pt~~~~d~~G~~~~~~-G~~~~~~~~l~~~l~~~ 150 (154)
T 2ju5_A 74 SEFKHFAG--VHLHMVEVDFPQKNHQPEEQRQKNQELKAQYKVTGFPELVFIDAEGKQLARM-GFEPGGGAAYVSKVKSA 150 (154)
T ss_dssp HHHHHHHH--HHCEEEEEECCSSCCCCHHHHHHHHHHHHHTTCCSSSEEEEECTTCCEEEEE-CCCTTCHHHHHHHHHHH
T ss_pred HHHHHHhc--CcEEEEEecCccccCCChhhHhhHHHHHHHcCCCCCCEEEEEcCCCCEEEEe-cCCCCCHHHHHHHHHHH
Confidence 34544443 57899999995431 23799999999 999999 567777778 877 899999998764
Q ss_pred C
Q psy1110 81 Q 81 (366)
Q Consensus 81 ~ 81 (366)
.
T Consensus 151 l 151 (154)
T 2ju5_A 151 L 151 (154)
T ss_dssp H
T ss_pred H
Confidence 3
No 388
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=93.88 E-value=0.088 Score=41.84 Aligned_cols=54 Identities=11% Similarity=0.067 Sum_probs=43.5
Q ss_pred CeEEEEeeeccc--------------------CCcchhccCCcc--ceEEeee-cCeeeEeec---CCccHHHHHHHHhC
Q psy1110 26 AITLGLIERLTE--------------------KADPVCTREKAK--KKVRRQK-NAEVKYVYE---NGNTKDKIIEFVRN 79 (366)
Q Consensus 26 ~I~~~~Vdc~~~--------------------~~~~lc~~~~I~--Pti~~f~-~g~~~~~y~---g~r~~~~i~~fi~~ 79 (366)
++.+..|++..+ ...+++++++|. |++.++. +|... .+. |..+.+.|.+++.+
T Consensus 55 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~P~~~lid~~G~i~-~~~~~~g~~~~~~l~~~l~~ 133 (136)
T 1lu4_A 55 AVTFVGIATRADVGAMQSFVSKYNLNFTNLNDADGVIWARYNVPWQPAFVFYRADGTST-FVNNPTAAMSQDELSGRVAA 133 (136)
T ss_dssp TSEEEEEECSSCHHHHHHHHHHHTCCSEEEECTTSHHHHHTTCCSSSEEEEECTTSCEE-EECCSSSCCCHHHHHHHHHH
T ss_pred CcEEEEEEcCCCHHHHHHHHHHcCCCceEEECCchhHHHhcCCCCCCEEEEECCCCcEE-EEEcCCCccCHHHHHHHHHH
Confidence 789999998651 134899999999 9999995 56555 888 88999999999876
Q ss_pred c
Q psy1110 80 P 80 (366)
Q Consensus 80 ~ 80 (366)
.
T Consensus 134 l 134 (136)
T 1lu4_A 134 L 134 (136)
T ss_dssp C
T ss_pred H
Confidence 4
No 389
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=93.85 E-value=0.13 Score=41.25 Aligned_cols=62 Identities=6% Similarity=0.055 Sum_probs=47.4
Q ss_pred hHHHhhcCCCCeEEEEeeecc-----------------------cCCcchhccCCcc--ceEEee-ecCeeeEeecCCcc
Q psy1110 16 PLAKEIVKPKAITLGLIERLT-----------------------EKADPVCTREKAK--KKVRRQ-KNAEVKYVYENGNT 69 (366)
Q Consensus 16 ~la~e~~~~~~I~~~~Vdc~~-----------------------~~~~~lc~~~~I~--Pti~~f-~~g~~~~~y~g~r~ 69 (366)
.+++++.. .++.+..|+++. .....++.+++|. |++.++ ++|.....+.|..+
T Consensus 58 ~~~~~~~~-~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~ 136 (145)
T 3erw_A 58 SFYDAHPS-DSVKLVTVNLVNSEQNQQVVEDFIKANKLTFPIVLDSKGELMKEYHIITIPTSFLLNEKGEIEKTKIGPMT 136 (145)
T ss_dssp HHHHHCCC-SSEEEEEEECGGGSSCHHHHHHHHHHTTCCSCEEECSSSHHHHHTTCCEESEEEEECTTCCEEEEEESCCC
T ss_pred HHHHHcCC-CCEEEEEEEccCCcCCHHHHHHHHHHcCCceeEEEcCchhHHHhcCcCccCeEEEEcCCCcEEEEEcCCcC
Confidence 34545442 469999999864 2244899999999 999999 56776778899999
Q ss_pred HHHHHHHHh
Q psy1110 70 KDKIIEFVR 78 (366)
Q Consensus 70 ~~~i~~fi~ 78 (366)
.+.|.+++.
T Consensus 137 ~~~l~~~l~ 145 (145)
T 3erw_A 137 AEQLKEWTE 145 (145)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHhhC
Confidence 999998873
No 390
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=93.50 E-value=0.016 Score=50.79 Aligned_cols=33 Identities=21% Similarity=0.317 Sum_probs=23.0
Q ss_pred cccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhC
Q psy1110 283 KRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRD 320 (366)
Q Consensus 283 ~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~ 320 (366)
..++|+|+||+++ +|+.... |. +.+.+.+.|+.
T Consensus 148 ~~~gv~gtPt~vv--ng~~~~~--~~-~~e~l~~~i~~ 180 (193)
T 3hz8_A 148 ETFQIDGVPTVIV--GGKYKVE--FA-DWESGMNTIDL 180 (193)
T ss_dssp HHTTCCSSSEEEE--TTTEEEC--CS-SHHHHHHHHHH
T ss_pred HHhCCCcCCEEEE--CCEEEec--CC-CHHHHHHHHHH
Confidence 4567899999998 8885443 33 77777666543
No 391
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=93.47 E-value=0.063 Score=46.21 Aligned_cols=42 Identities=14% Similarity=0.264 Sum_probs=35.6
Q ss_pred CCeEEEEEECCCChhhhcccHHH-HHHHHHHhccccEEEeecc
Q psy1110 116 ESSVLVMFYAPWCGHCKKLKPEY-EEAAATMKQQRAYYGMGML 157 (366)
Q Consensus 116 ~k~vlV~F~a~wC~~Ck~~~p~~-e~la~~~~~~v~~~~v~~~ 157 (366)
.++++|.||..+|++|..+.+.+ .++.+.+..++.+..+...
T Consensus 17 ~~~~~ief~d~~CP~C~~~~~~l~~~l~~~~~~~v~~~~~~l~ 59 (195)
T 3c7m_A 17 ADKTLIKVFSYACPFCYKYDKAVTGPVSEKVKDIVAFTPFHLE 59 (195)
T ss_dssp CTTEEEEEECTTCHHHHHHHHHTHHHHHHHTTTTCEEEEEECT
T ss_pred CCcEEEEEEeCcCcchhhCcHHHHHHHHHhCCCceEEEEEecC
Confidence 46688999999999999999999 9999988877777766654
No 392
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=93.44 E-value=0.034 Score=45.15 Aligned_cols=51 Identities=6% Similarity=0.011 Sum_probs=42.3
Q ss_pred CCeEEEEeeecccCCcc----hhccCCcc---ceEEeeecCeeeEeec-CCccHHHHHHHH
Q psy1110 25 KAITLGLIERLTEKADP----VCTREKAK---KKVRRQKNAEVKYVYE-NGNTKDKIIEFV 77 (366)
Q Consensus 25 ~~I~~~~Vdc~~~~~~~----lc~~~~I~---Pti~~f~~g~~~~~y~-g~r~~~~i~~fi 77 (366)
..+.+..||.++ +++ ++.++||+ ||+.+|++|+....-. +..+.++|.+++
T Consensus 53 ~~v~~~~vdVde--~r~~Sn~IA~~~~V~h~sPq~il~k~G~~v~~~SH~~I~~~~l~~~~ 111 (112)
T 3iv4_A 53 RDMDGYYLIVQQ--ERDLSDYIAKKTNVKHESPQAFYFVNGEMVWNRDHGDINVSSLAQAE 111 (112)
T ss_dssp HTCCEEEEEGGG--GHHHHHHHHHHHTCCCCSSEEEEEETTEEEEEEEGGGCSHHHHHHHT
T ss_pred CCceEEEEEeec--CchhhHHHHHHhCCccCCCeEEEEECCEEEEEeeccccCHHHHHHhh
Confidence 579999999966 446 79999999 9999999998776644 578888887765
No 393
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=93.44 E-value=0.099 Score=42.11 Aligned_cols=65 Identities=6% Similarity=0.035 Sum_probs=48.8
Q ss_pred hHHHhhcCCCCeEEEEeeecc-------------------------cCCcchhccCCcc--ceEEee-ecCeeeEeecCC
Q psy1110 16 PLAKEIVKPKAITLGLIERLT-------------------------EKADPVCTREKAK--KKVRRQ-KNAEVKYVYENG 67 (366)
Q Consensus 16 ~la~e~~~~~~I~~~~Vdc~~-------------------------~~~~~lc~~~~I~--Pti~~f-~~g~~~~~y~g~ 67 (366)
.+++++. ..+.+..|++.. ....+++.+++|. |++.++ ++|.....+.|.
T Consensus 53 ~l~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~ 130 (148)
T 2b5x_A 53 EFRDKYQ--DQLNVVAVHMPRSEDDLDPGKIKETAAEHDITQPIFVDSDHALTDAFENEYVPAYYVFDKTGQLRHFQAGG 130 (148)
T ss_dssp HHHHHHT--TTSEEEEEECCCSTTTSSHHHHHHHHHHTTCCSCEEECSSCHHHHHTCCCCSSEEEEECTTCBEEEEEESC
T ss_pred HHHHHhc--CCcEEEEEEcCCCccccCHHHHHHHHHHcCCCcceEECCchhHHHHhCCCCCCEEEEECCCCcEEEEecCC
Confidence 4555665 338999998642 2234799999999 999999 567767788898
Q ss_pred ccHHHHHHHHhCcCC
Q psy1110 68 NTKDKIIEFVRNPQA 82 (366)
Q Consensus 68 r~~~~i~~fi~~~~~ 82 (366)
.+.+.|.+++.+...
T Consensus 131 ~~~~~l~~~l~~~l~ 145 (148)
T 2b5x_A 131 SGMKMLEKRVNRVLA 145 (148)
T ss_dssp STTHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHh
Confidence 899999999876544
No 394
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=93.28 E-value=0.11 Score=41.03 Aligned_cols=55 Identities=13% Similarity=0.099 Sum_probs=43.4
Q ss_pred CeEEEEeeecc---------------------cCCcchhccCCcc--ceEEeee-cCeeeEeecCCccHHHHHHHHhCcC
Q psy1110 26 AITLGLIERLT---------------------EKADPVCTREKAK--KKVRRQK-NAEVKYVYENGNTKDKIIEFVRNPQ 81 (366)
Q Consensus 26 ~I~~~~Vdc~~---------------------~~~~~lc~~~~I~--Pti~~f~-~g~~~~~y~g~r~~~~i~~fi~~~~ 81 (366)
++.+..|++.. .....++.+++|. |++.++. +|... .|.|..+.+.|.+++.+..
T Consensus 56 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~P~~~~id~~g~i~-~~~g~~~~~~l~~~l~~~l 134 (136)
T 1zzo_A 56 EVTFVGVAGLDQVPAMQEFVNKYPVKTFTQLADTDGSVWANFGVTQQPAYAFVDPHGNVD-VVRGRMSQDELTRRVTALT 134 (136)
T ss_dssp TSEEEEEECSSCHHHHHHHHHHTTCTTSEEEECTTCHHHHHTTCCSSSEEEEECTTCCEE-EEESCCCHHHHHHHHHHHC
T ss_pred CeEEEEEeCCCCHHHHHHHHHHcCCCceEEEEcCCcHHHHHcCCCCCceEEEECCCCCEE-EEecCCCHHHHHHHHHHHh
Confidence 78999999843 2234799999999 9999996 55555 8889999999999987643
No 395
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=93.24 E-value=0.044 Score=46.39 Aligned_cols=64 Identities=11% Similarity=-0.021 Sum_probs=49.1
Q ss_pred chHHHhhcCCCCeEEEEeeecccCCcch--------------------------hccCCcc--ceEEee-ecCeeeEeec
Q psy1110 15 SPLAKEIVKPKAITLGLIERLTEKADPV--------------------------CTREKAK--KKVRRQ-KNAEVKYVYE 65 (366)
Q Consensus 15 ~~la~e~~~~~~I~~~~Vdc~~~~~~~l--------------------------c~~~~I~--Pti~~f-~~g~~~~~y~ 65 (366)
..+++.+. .++.+..||++... ++ +.+++|+ ||+.+| ++|.....+.
T Consensus 73 ~~~~~~~~--~~~~~v~v~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~Pt~~lid~~G~~~~~~~ 148 (172)
T 3f9u_A 73 PKVSSIIN--NDYVLITLYVDNKT--PLTEPVKIMENGTERTLRTVGDKWSYLQRVKFGANAQPFYVLIDNEGNPLNKSY 148 (172)
T ss_dssp HHHHHHHH--HHCEEEEEETTCCC--EEEEEEEEEETTEEEEEEEHHHHHHHHHHHHHSCCCSSEEEEECTTSCBSSCCB
T ss_pred HHHHHHhc--CCEEEEEEecCccc--ccchhhhhhhcchhhhhhhhhhhhhHHHHHHcCCCCcceEEEECCCCCEEeecc
Confidence 34555555 37999999996543 45 7889999 999999 5677777788
Q ss_pred CCcc-HHHHHHHHhCcCC
Q psy1110 66 NGNT-KDKIIEFVRNPQA 82 (366)
Q Consensus 66 g~r~-~~~i~~fi~~~~~ 82 (366)
|.++ .+.+++++.+...
T Consensus 149 G~~~~~~~l~~~l~~~l~ 166 (172)
T 3f9u_A 149 AYDEDISKYINFLQTGLE 166 (172)
T ss_dssp CSCCCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHH
Confidence 9888 9999999976543
No 396
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=93.16 E-value=0.061 Score=44.89 Aligned_cols=34 Identities=18% Similarity=0.393 Sum_probs=22.5
Q ss_pred hhhhhhhccCCeEEEEEEC----CCChhhhcccHHHHHH
Q psy1110 107 DNFDLVIQEESSVLVMFYA----PWCGHCKKLKPEYEEA 141 (366)
Q Consensus 107 ~~~~~~i~~~k~vlV~F~a----~wC~~Ck~~~p~~e~l 141 (366)
+.++.++...+ ++|+.++ +||++|++....|.++
T Consensus 26 ~~v~~~i~~~~-Vvvy~ks~~~~~~Cp~C~~ak~~L~~~ 63 (135)
T 2wci_A 26 EKIQRQIAENP-ILLYMKGSPKLPSCGFSAQAVQALAAC 63 (135)
T ss_dssp HHHHHHHHHCS-EEEEESBCSSSBSSHHHHHHHHHHHTT
T ss_pred HHHHHHhccCC-EEEEEEecCCCCCCccHHHHHHHHHHc
Confidence 44555665544 5555444 8999999888777553
No 397
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=93.09 E-value=0.082 Score=43.76 Aligned_cols=56 Identities=11% Similarity=0.130 Sum_probs=43.2
Q ss_pred CeEEEEeeecccCCcchhccCCcc--ceEEee-ecCeeeEeecCCccHHHHHHHHhCcCCc
Q psy1110 26 AITLGLIERLTEKADPVCTREKAK--KKVRRQ-KNAEVKYVYENGNTKDKIIEFVRNPQAT 83 (366)
Q Consensus 26 ~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f-~~g~~~~~y~g~r~~~~i~~fi~~~~~~ 83 (366)
++.+..++++... +++.+++|. ||+.++ ++|.....+.|.++.+.|.+++.+....
T Consensus 99 ~~~~~~~~~d~~~--~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~~~~~ 157 (164)
T 2h30_A 99 NYPKLPVVTDNGG--TIAQNLNISVYPSWALIGKDGDVQRIVKGSINEAQALALIRNPNAD 157 (164)
T ss_dssp CCTTSCEEECTTC--HHHHHTTCCSSSEEEEECTTSCEEEEEESCCCHHHHHHHHHCTTCC
T ss_pred CCCcceEEEcCch--HHHHHcCCCccceEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 3333445664444 899999999 999998 5677777888999999999999887654
No 398
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=92.56 E-value=0.017 Score=51.24 Aligned_cols=37 Identities=3% Similarity=-0.206 Sum_probs=29.2
Q ss_pred CCcceeeeccccccccccC------CCCCCCCccceeEEEEecccc
Q psy1110 239 GRGWELRQVGTGKRIKSIN------SGSFSPRQITGILAAVDVTRE 278 (366)
Q Consensus 239 ~~~~~~~~c~~c~~~~p~~------~~~~~~~~~~v~~a~vd~~~~ 278 (366)
-..|+..|||||+++.|+| ++.+. .++.+.+++.+.+
T Consensus 117 vveFf~~~C~~C~~~~p~~~~~~~l~~~~~---~~v~~~~~~v~~~ 159 (197)
T 1un2_A 117 VLEFFSFFCPHCYQFEEVLHISDNVKKKLP---EGVKMTKYHVNFM 159 (197)
T ss_dssp EEEEECTTCHHHHHHHHTSCHHHHHTTSSC---TTCCEEEEECSSS
T ss_pred EEEEECCCChhHHHhCcccccHHHHHHHCC---CCCEEEEeccCcC
Confidence 3567888999999999998 55654 3588999988754
No 399
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=92.02 E-value=0.23 Score=40.51 Aligned_cols=67 Identities=10% Similarity=0.020 Sum_probs=50.7
Q ss_pred hHHHhhcCCCCeEEEEeeecccC--------------------CcchhccCCcc--ceEEee-ecCeeeEeecCCccHHH
Q psy1110 16 PLAKEIVKPKAITLGLIERLTEK--------------------ADPVCTREKAK--KKVRRQ-KNAEVKYVYENGNTKDK 72 (366)
Q Consensus 16 ~la~e~~~~~~I~~~~Vdc~~~~--------------------~~~lc~~~~I~--Pti~~f-~~g~~~~~y~g~r~~~~ 72 (366)
.+++++.+ .++.+..|++..+. ...++.+++|. |++.++ ++|.....+.|..+.+.
T Consensus 50 ~~~~~~~~-~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~G~~~~~~ 128 (151)
T 2f9s_A 50 NQYKHFKS-QGVEIVAVNVGESKIAVHNFMKSYGVNFPVVLDTDRQVLDAYDVSPLPTTFLINPEGKVVKVVTGTMTESM 128 (151)
T ss_dssp HHHHHHGG-GTEEEEEEEESCCHHHHHHHHHHHTCCSCEEEETTSHHHHHTTCCSSCEEEEECTTSEEEEEEESCCCHHH
T ss_pred HHHHHhcc-CCeEEEEEECCCCHHHHHHHHHHcCCCceEEECCchHHHHhcCCCCCCeEEEECCCCcEEEEEeCCCCHHH
Confidence 45555542 36999999985421 23799999999 999888 56777778889889999
Q ss_pred HHHHHhCcCCc
Q psy1110 73 IIEFVRNPQAT 83 (366)
Q Consensus 73 i~~fi~~~~~~ 83 (366)
|.+++......
T Consensus 129 l~~~l~~ll~~ 139 (151)
T 2f9s_A 129 IHDYMNLIKPG 139 (151)
T ss_dssp HHHHHHHHSCC
T ss_pred HHHHHHHHHhh
Confidence 99999876654
No 400
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=91.83 E-value=0.17 Score=38.67 Aligned_cols=63 Identities=2% Similarity=-0.111 Sum_probs=44.0
Q ss_pred CCCchHHHhhcCCCCeEEEEeeecccCCcchhccCCcc-ceEEeeecCeeeEeecCCccHHHHHHHHhCcCCc
Q psy1110 12 EDTSPLAKEIVKPKAITLGLIERLTEKADPVCTREKAK-KKVRRQKNAEVKYVYENGNTKDKIIEFVRNPQAT 83 (366)
Q Consensus 12 ~~~~~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~-Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~~~~ 83 (366)
+.+.++-+++... .+.+||.+++. ++..++|++ ||+.+ .+|.... |..+.+.|.+++......
T Consensus 15 ~~~~~~L~~~~~~---~~~~vdid~~~--~l~~~~g~~vPtl~~-~~G~~v~---g~~~~~~L~~~l~~~~~~ 78 (87)
T 1ttz_A 15 DQAVEALAQARAG---AFFSVFIDDDA--ALESAYGLRVPVLRD-PMGRELD---WPFDAPRLRAWLDAAPHA 78 (87)
T ss_dssp HHHHHHHHHTTCC---CEEEEECTTCH--HHHHHHTTTCSEEEC-TTCCEEE---SCCCHHHHHHHHHTCC--
T ss_pred HHHHHHHHHHHHh---heEEEECCCCH--HHHHHhCCCcCeEEE-ECCEEEe---CCCCHHHHHHHHHHHHHH
Confidence 3444555554421 16889996644 899999999 99988 6676442 788999999999775543
No 401
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=91.72 E-value=0.23 Score=40.59 Aligned_cols=46 Identities=11% Similarity=0.095 Sum_probs=38.3
Q ss_pred CcchhccCCcc--ceEEee-ecCeeeEeecCCccHHHHHHHHhCcCCcc
Q psy1110 39 ADPVCTREKAK--KKVRRQ-KNAEVKYVYENGNTKDKIIEFVRNPQATS 84 (366)
Q Consensus 39 ~~~lc~~~~I~--Pti~~f-~~g~~~~~y~g~r~~~~i~~fi~~~~~~~ 84 (366)
...++.+++|. |++.++ ++|.....+.|..+.+.|.+++.+....+
T Consensus 98 ~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~~~~~ 146 (154)
T 3ia1_A 98 PHEVAARFKVLGQPWTFVVDREGKVVALFAGRAGREALLDALLLAGADL 146 (154)
T ss_dssp HHHHHTTSSBCSSCEEEEECTTSEEEEEEESBCCHHHHHHHHHHTTCCC
T ss_pred hHHHHHHhCCCcccEEEEECCCCCEEEEEcCCCCHHHHHHHHHhccCcc
Confidence 34799999999 997777 56777788899999999999998877753
No 402
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=90.94 E-value=0.26 Score=40.26 Aligned_cols=56 Identities=11% Similarity=0.201 Sum_probs=43.8
Q ss_pred hHHHhhcCCCCeEEEEeeecccCCcchhccCCcc-ceEEeeecC-eeeEeecC----CccHHHHHHHHhC
Q psy1110 16 PLAKEIVKPKAITLGLIERLTEKADPVCTREKAK-KKVRRQKNA-EVKYVYEN----GNTKDKIIEFVRN 79 (366)
Q Consensus 16 ~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~-Pti~~f~~g-~~~~~y~g----~r~~~~i~~fi~~ 79 (366)
.+|..+ ..+.|+.++. .++..++++. |++.+|++. +....|.| ..+.++|.+||..
T Consensus 60 ~~A~~~---~d~~F~~t~~-----~~v~~~~~v~~~~vvlfkkfde~~~~~~g~~~~~~~~~~L~~FI~~ 121 (124)
T 2l4c_A 60 SMVQKF---PGVSFGISTD-----SEVLTHYNITGNTICLFRLVDNEQLNLEDEDIESIDATKLSRFIEI 121 (124)
T ss_dssp HHHHHC---TTSEEEEECC-----HHHHHHTTCCSSCEEEEETTTTEEEEECHHHHTTCCHHHHHHHHHH
T ss_pred HHHHhC---CCceEEEECh-----HHHHHHcCCCCCeEEEEEcCCCCceeecCcccCCCCHHHHHHHHHH
Confidence 345554 4578888765 2599999999 999999986 35678886 7899999999975
No 403
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=90.88 E-value=0.2 Score=39.68 Aligned_cols=32 Identities=19% Similarity=0.518 Sum_probs=21.3
Q ss_pred hhhhhhccCCeEEEEEEC-----CCChhhhcccHHHHHH
Q psy1110 108 NFDLVIQEESSVLVMFYA-----PWCGHCKKLKPEYEEA 141 (366)
Q Consensus 108 ~~~~~i~~~k~vlV~F~a-----~wC~~Ck~~~p~~e~l 141 (366)
.+++++++++ |+| |.. |||++|++....+.+.
T Consensus 10 ~v~~~i~~~~-Vvv-y~k~t~~~p~Cp~C~~ak~~L~~~ 46 (109)
T 3ipz_A 10 TLEKLVNSEK-VVL-FMKGTRDFPMCGFSNTVVQILKNL 46 (109)
T ss_dssp HHHHHHTSSS-EEE-EESBCSSSBSSHHHHHHHHHHHHT
T ss_pred HHHHHHccCC-EEE-EEecCCCCCCChhHHHHHHHHHHc
Confidence 3455666554 333 554 4999999988877764
No 404
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=90.70 E-value=0.32 Score=39.47 Aligned_cols=32 Identities=19% Similarity=0.356 Sum_probs=21.9
Q ss_pred hhhhhhccCCeEEEEEEC-----CCChhhhcccHHHHHH
Q psy1110 108 NFDLVIQEESSVLVMFYA-----PWCGHCKKLKPEYEEA 141 (366)
Q Consensus 108 ~~~~~i~~~k~vlV~F~a-----~wC~~Ck~~~p~~e~l 141 (366)
-+++++++++.+ .|.. |||++|++....|.+.
T Consensus 8 ~v~~~i~~~~Vv--vfsk~t~~~p~Cp~C~~ak~lL~~~ 44 (121)
T 3gx8_A 8 AIEDAIESAPVV--LFMKGTPEFPKCGFSRATIGLLGNQ 44 (121)
T ss_dssp HHHHHHHSCSEE--EEESBCSSSBCTTHHHHHHHHHHHH
T ss_pred HHHHHhccCCEE--EEEeccCCCCCCccHHHHHHHHHHc
Confidence 345667665533 3444 5999999998888775
No 405
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=90.55 E-value=0.4 Score=39.14 Aligned_cols=67 Identities=6% Similarity=-0.047 Sum_probs=49.6
Q ss_pred hHHHhhcCCCCeEEEEeeecc----------------------cCCcchhccCC--cc--ceEEeee-cCeeeEeecCCc
Q psy1110 16 PLAKEIVKPKAITLGLIERLT----------------------EKADPVCTREK--AK--KKVRRQK-NAEVKYVYENGN 68 (366)
Q Consensus 16 ~la~e~~~~~~I~~~~Vdc~~----------------------~~~~~lc~~~~--I~--Pti~~f~-~g~~~~~y~g~r 68 (366)
.+++++. ..++.+..|+++. ....+++.++| |. |++.++. +|.....|.|..
T Consensus 48 ~l~~~~~-~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~ 126 (151)
T 3raz_A 48 KWYKAQK-KGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTGANSRNFMKTYGNTVGVLPFTVVEAPKCGYRQTITGEV 126 (151)
T ss_dssp HHHHTSC-TTTEEEEEEESSCHHHHHHHHHHSCCSSCEEEECCSCHHHHHHTTTCCSCCSSEEEEEETTTTEEEECCSCC
T ss_pred HHHHHhc-cCCeEEEEEECCChHHHHHHHHHcCCCCceEecCccchHHHHHHhCCccCCCCEEEEECCCCcEEEEECCCC
Confidence 4555553 3579999998852 12235888899 77 9988885 577778899999
Q ss_pred cHHHHHHHHhCcCCc
Q psy1110 69 TKDKIIEFVRNPQAT 83 (366)
Q Consensus 69 ~~~~i~~fi~~~~~~ 83 (366)
+.+.|.+++.+....
T Consensus 127 ~~~~l~~~l~~l~~~ 141 (151)
T 3raz_A 127 NEKSLTDAVKLAHSK 141 (151)
T ss_dssp CHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHH
Confidence 999999999876554
No 406
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=90.26 E-value=0.32 Score=38.80 Aligned_cols=32 Identities=16% Similarity=0.421 Sum_probs=22.1
Q ss_pred hhhhhhccCCeEEEEEEC-----CCChhhhcccHHHHHH
Q psy1110 108 NFDLVIQEESSVLVMFYA-----PWCGHCKKLKPEYEEA 141 (366)
Q Consensus 108 ~~~~~i~~~k~vlV~F~a-----~wC~~Ck~~~p~~e~l 141 (366)
.++.++++++ +|.|.. +||++|++....+.+.
T Consensus 8 ~v~~~i~~~~--Vvlf~kg~~~~~~Cp~C~~ak~~L~~~ 44 (111)
T 3zyw_A 8 RLKKLTHAAP--CMLFMKGTPQEPRCGFSKQMVEILHKH 44 (111)
T ss_dssp HHHHHHTSSS--EEEEESBCSSSBSSHHHHHHHHHHHHT
T ss_pred HHHHHHhcCC--EEEEEecCCCCCcchhHHHHHHHHHHc
Confidence 3455665443 445677 9999999988877653
No 407
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=90.15 E-value=0.58 Score=36.53 Aligned_cols=39 Identities=10% Similarity=0.036 Sum_probs=33.7
Q ss_pred chhccCCcc--ceEEee-ecCeeeEeecCCccHHHHHHHHhC
Q psy1110 41 PVCTREKAK--KKVRRQ-KNAEVKYVYENGNTKDKIIEFVRN 79 (366)
Q Consensus 41 ~lc~~~~I~--Pti~~f-~~g~~~~~y~g~r~~~~i~~fi~~ 79 (366)
.++.++||. |++.++ ++|.....+.|..+.+.+.+++++
T Consensus 95 ~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ 136 (138)
T 4evm_A 95 KLLETYGVRSYPTQAFIDKEGKLVKTHPGFMEKDAILQTLKE 136 (138)
T ss_dssp HHHHHTTCCSSSEEEEECTTCCEEEEEESCCCHHHHHHHHHH
T ss_pred HHHHHcCcccCCeEEEECCCCcEEEeecCCCcHHHHHHHHHh
Confidence 799999999 999999 467767888999999999998865
No 408
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=89.94 E-value=0.19 Score=44.00 Aligned_cols=45 Identities=16% Similarity=0.119 Sum_probs=37.0
Q ss_pred cccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCC
Q psy1110 277 REKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDP 321 (366)
Q Consensus 277 ~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~ 321 (366)
.+......++|+|+||++++.+|+......|..+.+.|.++|++.
T Consensus 164 ~~~~~a~~~gv~g~Pt~~i~~~G~~~~~~~G~~~~~~l~~~l~~~ 208 (216)
T 2in3_A 164 AGFQRVAQWGISGFPALVVESGTDRYLITTGYRPIEALRQLLDTW 208 (216)
T ss_dssp HHHHHHHHTTCCSSSEEEEEETTEEEEEESSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCcccceEEEEECCEEEEeccCCCCHHHHHHHHHHH
Confidence 344567789999999999999999766788998999988888654
No 409
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=89.87 E-value=0.21 Score=41.06 Aligned_cols=33 Identities=18% Similarity=0.453 Sum_probs=26.0
Q ss_pred hhhhhhhccCCeEEEEEECCCChhhhcccHHHHHH
Q psy1110 107 DNFDLVIQEESSVLVMFYAPWCGHCKKLKPEYEEA 141 (366)
Q Consensus 107 ~~~~~~i~~~k~vlV~F~a~wC~~Ck~~~p~~e~l 141 (366)
++|+++++..+ ++.|..+||++|++....+.+.
T Consensus 5 ~~~~~ii~~~~--Vvvysk~~Cp~C~~ak~lL~~~ 37 (127)
T 3l4n_A 5 KEYSLILDLSP--IIIFSKSTCSYSKGMKELLENE 37 (127)
T ss_dssp HHHHHHHTSCS--EEEEECTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHccCC--EEEEEcCCCccHHHHHHHHHHh
Confidence 46777776554 6778999999999998887763
No 410
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=89.75 E-value=0.41 Score=38.41 Aligned_cols=61 Identities=7% Similarity=-0.164 Sum_probs=45.7
Q ss_pred hHHHhhcCCCCeEEEEeeecccCCcc-------------------------hhccCCcc--ceEEeee-cCeeeEeecCC
Q psy1110 16 PLAKEIVKPKAITLGLIERLTEKADP-------------------------VCTREKAK--KKVRRQK-NAEVKYVYENG 67 (366)
Q Consensus 16 ~la~e~~~~~~I~~~~Vdc~~~~~~~-------------------------lc~~~~I~--Pti~~f~-~g~~~~~y~g~ 67 (366)
.+++++.. .++.|..|++..+. + ++.+++|. |++.++. +|.....+.|.
T Consensus 55 ~l~~~~~~-~~~~~v~v~~d~~~--~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~ 131 (148)
T 3hcz_A 55 DWWLKNRA-KGIQVYAANIERKD--EEWLKFIRSKKIGGWLNVRDSKNHTDFKITYDIYATPVLYVLDKNKVIIAKRIGY 131 (148)
T ss_dssp HHHHHHGG-GTEEEEEEECCSSS--HHHHHHHHHHTCTTSEEEECTTCCCCHHHHHCCCSSCEEEEECTTCBEEEESCCG
T ss_pred HHHHHhcc-CCEEEEEEEecCCH--HHHHHHHHHcCCCCceEEeccccchhHHHhcCcCCCCEEEEECCCCcEEEecCCH
Confidence 34555542 35999999996543 4 99999999 9999994 56667788888
Q ss_pred ccHHHHHHHHhC
Q psy1110 68 NTKDKIIEFVRN 79 (366)
Q Consensus 68 r~~~~i~~fi~~ 79 (366)
.+.+++++.+.+
T Consensus 132 ~~~~~~l~~l~~ 143 (148)
T 3hcz_A 132 ENLDDFLVQYEK 143 (148)
T ss_dssp GGHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 788888877754
No 411
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=89.43 E-value=0.45 Score=35.64 Aligned_cols=21 Identities=19% Similarity=0.362 Sum_probs=16.6
Q ss_pred EEEEECC----CChhhhcccHHHHH
Q psy1110 120 LVMFYAP----WCGHCKKLKPEYEE 140 (366)
Q Consensus 120 lV~F~a~----wC~~Ck~~~p~~e~ 140 (366)
++.|+.+ ||++|++....|++
T Consensus 2 v~iY~~~~~~~~Cp~C~~ak~~L~~ 26 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNAKRLLTV 26 (87)
T ss_dssp EEEEECCTTTSCCHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCcCccHHHHHHHHHH
Confidence 4567889 99999888777665
No 412
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=89.28 E-value=0.36 Score=45.44 Aligned_cols=47 Identities=13% Similarity=0.114 Sum_probs=35.9
Q ss_pred Eeeecc----cCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCcCC
Q psy1110 31 LIERLT----EKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNPQA 82 (366)
Q Consensus 31 ~Vdc~~----~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~~~ 82 (366)
.|||+. +++.++|+++||+ ||+.+ +|+ .|.|.++.++|.+|+.-...
T Consensus 228 ~Vd~d~~d~~~~~~~la~~~gI~~vPT~~i--~G~---~~~G~~~~~~L~~~l~~~~~ 280 (291)
T 3kp9_A 228 YVECSPNGPGTPQAQECTEAGITSYPTWII--NGR---TYTGVRSLEALAVASGYPLE 280 (291)
T ss_dssp EEESCSSCSSSCCCHHHHTTTCCSTTEEEE--TTE---EEESCCCHHHHHHHTCCCC-
T ss_pred EEEEeecCchhhHHHHHHHcCCcccCeEEE--CCE---EecCCCCHHHHHHHHCCCCc
Confidence 677762 2256999999999 99644 675 48999999999999965444
No 413
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=88.74 E-value=0.63 Score=37.24 Aligned_cols=64 Identities=9% Similarity=-0.031 Sum_probs=43.8
Q ss_pred chHHHhhcCCCCeEEEEeeecccC-----------------------CcchhccCCcc--ceEEeee-cCeeeEeecCCc
Q psy1110 15 SPLAKEIVKPKAITLGLIERLTEK-----------------------ADPVCTREKAK--KKVRRQK-NAEVKYVYENGN 68 (366)
Q Consensus 15 ~~la~e~~~~~~I~~~~Vdc~~~~-----------------------~~~lc~~~~I~--Pti~~f~-~g~~~~~y~g~r 68 (366)
..+++++.+..++.+..|+++.+. ...++.++||. |++.++. +|.....+.
T Consensus 56 ~~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~--- 132 (148)
T 3fkf_A 56 KRLNKEYKKNKNFAMLGISLDIDREAWETAIKKDTLSWDQVCDFTGLSSETAKQYAILTLPTNILLSPTGKILARDI--- 132 (148)
T ss_dssp HHHHHHTTTCTTEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTTCCSSSEEEEECTTSBEEEESC---
T ss_pred HHHHHHhcCCCCeEEEEEECCCCHHHHHHHHHHcCCCceEEEccCCcchHHHHhcCCCCcCEEEEECCCCeEEEecC---
Confidence 345556523346999999886533 44899999999 9999995 555444443
Q ss_pred cHHHHHHHHhCcC
Q psy1110 69 TKDKIIEFVRNPQ 81 (366)
Q Consensus 69 ~~~~i~~fi~~~~ 81 (366)
+.+.+.+++.+..
T Consensus 133 ~~~~l~~~l~~ll 145 (148)
T 3fkf_A 133 QGEALTGKLKELL 145 (148)
T ss_dssp CHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHH
Confidence 7777777776543
No 414
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=88.22 E-value=0.27 Score=45.84 Aligned_cols=29 Identities=14% Similarity=0.300 Sum_probs=24.7
Q ss_pred CeEEEEEECCCChhhhcccHHHHHHHHHH
Q psy1110 117 SSVLVMFYAPWCGHCKKLKPEYEEAAATM 145 (366)
Q Consensus 117 k~vlV~F~a~wC~~Ck~~~p~~e~la~~~ 145 (366)
...+..|..++|++|......+.+++..+
T Consensus 43 ~~~VelyTs~gCp~C~~Ak~lL~~~~~~~ 71 (270)
T 2axo_A 43 KGVVELFTSQGCASCPPADEALRKMIQKG 71 (270)
T ss_dssp CCEEEEEECTTCTTCHHHHHHHHHHHHHT
T ss_pred CcEEEEEeCCCCCChHHHHHHHHHhhccC
Confidence 35778899999999999999999987654
No 415
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=87.93 E-value=0.58 Score=37.90 Aligned_cols=66 Identities=9% Similarity=-0.015 Sum_probs=49.2
Q ss_pred HHHhhcCCCCeEEEEeeecccC---------------------CcchhccCCcc--ceEEeee-cCeeeEeecCCccHHH
Q psy1110 17 LAKEIVKPKAITLGLIERLTEK---------------------ADPVCTREKAK--KKVRRQK-NAEVKYVYENGNTKDK 72 (366)
Q Consensus 17 la~e~~~~~~I~~~~Vdc~~~~---------------------~~~lc~~~~I~--Pti~~f~-~g~~~~~y~g~r~~~~ 72 (366)
+++++. ..++.+..|+++.+. ...++.+++|. |++.++. +|.....+.|..+.+.
T Consensus 55 l~~~~~-~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~ 133 (152)
T 2lja_A 55 LEEKYA-GKDIHFVSLSCDKNKKAWENMVTKDQLKGIQLHMGTDRTFMDAYLINGIPRFILLDRDGKIISANMTRPSDPK 133 (152)
T ss_dssp HHHHST-TSSEEEEEEECCSCHHHHHHHHHHHTCCSEEEECSSCTHHHHHTTCCSSCCEEEECTTSCEEESSCCCTTCHH
T ss_pred HHHHhc-cCCeEEEEEEccCcHHHHHHHHHhcCCCCceeecCcchhHHHHcCcCCCCEEEEECCCCeEEEccCCCCCHHH
Confidence 444443 246999999986542 12689999999 9999998 6776677788888899
Q ss_pred HHHHHhCcCCc
Q psy1110 73 IIEFVRNPQAT 83 (366)
Q Consensus 73 i~~fi~~~~~~ 83 (366)
|.+++.+....
T Consensus 134 l~~~l~~~~~~ 144 (152)
T 2lja_A 134 TAEKFNELLGL 144 (152)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHhcc
Confidence 99999876554
No 416
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=87.86 E-value=0.76 Score=36.42 Aligned_cols=13 Identities=23% Similarity=0.370 Sum_probs=11.2
Q ss_pred EEEEECCCChhhh
Q psy1110 120 LVMFYAPWCGHCK 132 (366)
Q Consensus 120 lV~F~a~wC~~Ck 132 (366)
++.|..+||+.|+
T Consensus 10 V~vy~~~~C~~C~ 22 (111)
T 2ct6_A 10 IRVFIASSSGFVA 22 (111)
T ss_dssp EEEEECSSCSCHH
T ss_pred EEEEEcCCCCCcc
Confidence 6677899999998
No 417
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=87.74 E-value=0.64 Score=35.34 Aligned_cols=20 Identities=10% Similarity=0.189 Sum_probs=14.3
Q ss_pred EEEEECCCChhh------hcccHHHH
Q psy1110 120 LVMFYAPWCGHC------KKLKPEYE 139 (366)
Q Consensus 120 lV~F~a~wC~~C------k~~~p~~e 139 (366)
++.|..+||+.| ++....++
T Consensus 4 v~ly~~~~C~~c~~~~~~~~ak~~L~ 29 (93)
T 1t1v_A 4 LRVYSTSVTGSREIKSQQSEVTRILD 29 (93)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCCCCchhhHHHHHHHHHHH
Confidence 566789999999 56555544
No 418
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=87.10 E-value=0.81 Score=37.49 Aligned_cols=66 Identities=12% Similarity=0.017 Sum_probs=48.1
Q ss_pred chHHHhhcCCCCeEEEEeeecccCCcchhccC---------------------------Ccc--ceEEee-ecCeeeEee
Q psy1110 15 SPLAKEIVKPKAITLGLIERLTEKADPVCTRE---------------------------KAK--KKVRRQ-KNAEVKYVY 64 (366)
Q Consensus 15 ~~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~---------------------------~I~--Pti~~f-~~g~~~~~y 64 (366)
..+++++. ..++.+..|+++.+. +.+.++ +|. |++.++ ++|.....|
T Consensus 57 ~~l~~~~~-~~~v~~v~v~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~~~lid~~G~i~~~~ 133 (165)
T 3or5_A 57 VQVQKTWA-SRGFTFVGIAVNEQL--PNVKNYMKTQGIIYPVMMATPELIRAFNGYIDGGITGIPTSFVIDASGNVSGVI 133 (165)
T ss_dssp HHHHHHHT-TTTEEEEEEECSCCH--HHHHHHHHHHTCCSCEEECCHHHHHHHHTTSTTCSCSSSEEEEECTTSBEEEEE
T ss_pred HHHHHHhc-cCCeEEEEEECCCCH--HHHHHHHHHcCCCCceEecCHHHHHHHhhhhccCCCCCCeEEEECCCCcEEEEE
Confidence 34556665 245999999996533 555555 788 998888 467767888
Q ss_pred cCCccHHHHHHHHhCcCCc
Q psy1110 65 ENGNTKDKIIEFVRNPQAT 83 (366)
Q Consensus 65 ~g~r~~~~i~~fi~~~~~~ 83 (366)
.|..+.+.|.+++.+.+..
T Consensus 134 ~g~~~~~~l~~~l~~~l~~ 152 (165)
T 3or5_A 134 VGPRSKADFDRIVKMALGA 152 (165)
T ss_dssp CSCCCHHHHHHHHHHHHC-
T ss_pred cCCCCHHHHHHHHHHHHhh
Confidence 8999999999999876654
No 419
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=86.94 E-value=0.17 Score=42.80 Aligned_cols=55 Identities=7% Similarity=0.045 Sum_probs=41.5
Q ss_pred CeEEEEeeecccCCcc-hhccCCc--c--ceEEee-ecCeeeEeecCC----------ccHHHHHHHHhCcCC
Q psy1110 26 AITLGLIERLTEKADP-VCTREKA--K--KKVRRQ-KNAEVKYVYENG----------NTKDKIIEFVRNPQA 82 (366)
Q Consensus 26 ~I~~~~Vdc~~~~~~~-lc~~~~I--~--Pti~~f-~~g~~~~~y~g~----------r~~~~i~~fi~~~~~ 82 (366)
++.|..|||.... + ++.++++ . ||+.+| ++|.....+.|. .+.++|++++.+...
T Consensus 78 ~~~~~~v~~d~~~--~~~~~~~~~~~~~~Pt~~~~d~~G~~~~~~~G~~~~~~~~~~~~~~~~l~~~l~~~l~ 148 (164)
T 1sen_A 78 SHNFVMVNLEDEE--EPKDEDFSPDGGYIPRILFLDPSGKVHPEIINENGNPSYKYFYVSAEQVVQGMKEAQE 148 (164)
T ss_dssp HTTSEEEEEEGGG--SCSCGGGCTTCSCSSEEEEECTTSCBCTTCCCTTSCTTSTTCCCSHHHHHHHHHHHHH
T ss_pred CCeEEEEEecCCc--hHHHHHhcccCCcCCeEEEECCCCCEEEEEeCCCCccchhcccCCHHHHHHHHHHHHH
Confidence 4778888886644 5 8888887 4 999999 567666666673 788999999977543
No 420
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=86.89 E-value=0.93 Score=36.68 Aligned_cols=45 Identities=9% Similarity=-0.006 Sum_probs=36.6
Q ss_pred CcchhccCCcc--ceEEeee-cCeeeEeecCCccHHHHHHHHhCcCCc
Q psy1110 39 ADPVCTREKAK--KKVRRQK-NAEVKYVYENGNTKDKIIEFVRNPQAT 83 (366)
Q Consensus 39 ~~~lc~~~~I~--Pti~~f~-~g~~~~~y~g~r~~~~i~~fi~~~~~~ 83 (366)
...++..++|. |++.++. +|.....|.|..+.+.|.+++......
T Consensus 95 ~~~~~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll~~ 142 (153)
T 2l5o_A 95 DKAVGQAFGTQVYPTSVLIGKKGEILKTYVGEPDFGKLYQEIDTAWRN 142 (153)
T ss_dssp SCHHHHHHTCCSSSEEEEECSSSCCCEEEESSCCHHHHHHHHHHHHHC
T ss_pred hHHHHHHcCCCccCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHHHHh
Confidence 34799999999 9999884 566667889999999999999775543
No 421
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=85.22 E-value=0.18 Score=40.56 Aligned_cols=69 Identities=14% Similarity=0.212 Sum_probs=50.4
Q ss_pred CcCCcceeeeccccccccccCCCCCCC---CccceeEEEEecccc-------------------------cccccccccc
Q psy1110 237 SVGRGWELRQVGTGKRIKSINSGSFSP---RQITGILAAVDVTRE-------------------------KSLGKRFDIK 288 (366)
Q Consensus 237 ~~~~~~~~~~c~~c~~~~p~~~~~~~~---~~~~v~~a~vd~~~~-------------------------~~l~~~~~I~ 288 (366)
.+...|.+.||++|+...|.+.+-++. ...++.+..++++.. ..+++.|+|+
T Consensus 28 ~vll~F~a~wC~~C~~~~~~l~~~~~~~~~~~~~~~v~~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 107 (143)
T 2lus_A 28 IIGFYFSAHWCPPCRGFTPILADMYSELVDDSAPFEIIFVSSDRSEDDMFQYMMESHGDWLAIPYRSGPASNVTAKYGIT 107 (143)
Confidence 344566778999999999998553333 234566666665533 3688999999
Q ss_pred cCCeEEEec-CCceeeec
Q psy1110 289 GFPTLKYFR-AGSVAFDA 305 (366)
Q Consensus 289 ~~Ptl~~fk-~G~~~~~~ 305 (366)
++||++++. +|+++.+.
T Consensus 108 ~~P~~~lid~~G~i~~~~ 125 (143)
T 2lus_A 108 GIPALVIVKKDGTLISMN 125 (143)
Confidence 999999995 89877653
No 422
>3kzq_A Putative uncharacterized protein VP2116; protein with unknown function, STRU genomics, PSI, MCSG, protein structure initiative; HET: PG6; 2.10A {Vibrio parahaemolyticus}
Probab=84.87 E-value=0.55 Score=41.07 Aligned_cols=43 Identities=14% Similarity=0.183 Sum_probs=35.6
Q ss_pred cccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCC
Q psy1110 279 KSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDP 321 (366)
Q Consensus 279 ~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~ 321 (366)
...+..++|+|+||+++..+|+.+....|..+.+.+++.|+..
T Consensus 159 ~~~a~~~gv~g~Pt~~v~~~~~~~~~~~g~~~~e~~~~~i~~~ 201 (208)
T 3kzq_A 159 LSLAKSLGVNSYPSLVLQINDAYFPIEVDYLSTEPTLKLIRER 201 (208)
T ss_dssp HHHHHHTTCCSSSEEEEEETTEEEEECCCSSCSHHHHHHHHHH
T ss_pred HHHHHHcCCCcccEEEEEECCEEEEeeCCCCCHHHHHHHHHHH
Confidence 3556688999999999988898877788999989888877654
No 423
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=84.85 E-value=0.88 Score=36.74 Aligned_cols=33 Identities=18% Similarity=0.507 Sum_probs=21.9
Q ss_pred hhhhhhhccCCeEEEEEEC-----CCChhhhcccHHHHHH
Q psy1110 107 DNFDLVIQEESSVLVMFYA-----PWCGHCKKLKPEYEEA 141 (366)
Q Consensus 107 ~~~~~~i~~~k~vlV~F~a-----~wC~~Ck~~~p~~e~l 141 (366)
+.+++++++++ +|.|.. |||++|++....|.++
T Consensus 11 ~~v~~~i~~~~--Vvvfsk~t~~~p~Cp~C~~ak~lL~~~ 48 (118)
T 2wem_A 11 EQLDALVKKDK--VVVFLKGTPEQPQCGFSNAVVQILRLH 48 (118)
T ss_dssp HHHHHHHHHSS--EEEEESBCSSSBSSHHHHHHHHHHHHT
T ss_pred HHHHHHhccCC--EEEEEecCCCCCccHHHHHHHHHHHHc
Confidence 34556666555 333555 4999999988877654
No 424
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=85.10 E-value=0.18 Score=41.62 Aligned_cols=84 Identities=10% Similarity=0.047 Sum_probs=56.5
Q ss_pred cCCcceeeeccccccccccCCC-CCCCC--ccceeEEEEecccccccccccc------------------------cccC
Q psy1110 238 VGRGWELRQVGTGKRIKSINSG-SFSPR--QITGILAAVDVTREKSLGKRFD------------------------IKGF 290 (366)
Q Consensus 238 ~~~~~~~~~c~~c~~~~p~~~~-~~~~~--~~~v~~a~vd~~~~~~l~~~~~------------------------I~~~ 290 (366)
+...|.+.||++|++..|.+.+ -+... ..++.++.++.+........|. +.++
T Consensus 36 vll~f~a~~C~~C~~~~~~l~~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 115 (159)
T 2ls5_A 36 VMLQFTASWCGVCRKEMPFIEKDIWLKHKDNADFALIGIDRDEPLEKVLAFAKSTGVTYPLGLDPGADIFAKYALRDAGI 115 (159)
Confidence 3445567899999999999876 33322 2457777777655443333333 6789
Q ss_pred CeEEEe-cCCceeeecCCCCCHHHHHHHHhCCC
Q psy1110 291 PTLKYF-RAGSVAFDAGHLRDASRLVEFMRDPT 322 (366)
Q Consensus 291 Ptl~~f-k~G~~~~~~~g~~~~e~l~~fi~~~~ 322 (366)
|+++++ ++|+++.++.| .+.+++.+++++..
T Consensus 116 P~~~lid~~G~i~~~~~g-~~~~~l~~~l~~l~ 147 (159)
T 2ls5_A 116 TRNVLIDREGKIVKLTRL-YNEEEFASLVQQIN 147 (159)
Confidence 999988 89998888877 35555666555443
No 425
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=83.98 E-value=1.1 Score=40.32 Aligned_cols=42 Identities=10% Similarity=0.227 Sum_probs=33.3
Q ss_pred CCeEEEEEECCCChhhhcccHH-HHHHHHHH--hccccEEEeecc
Q psy1110 116 ESSVLVMFYAPWCGHCKKLKPE-YEEAAATM--KQQRAYYGMGML 157 (366)
Q Consensus 116 ~k~vlV~F~a~wC~~Ck~~~p~-~e~la~~~--~~~v~~~~v~~~ 157 (366)
.+.+++.|+...|++|+++.+. +.++.++| .+++.++..+.-
T Consensus 39 A~vtIvef~Dy~CP~C~~~~~~~~~~l~~~~~~~g~V~~v~~~~p 83 (226)
T 3f4s_A 39 APILMIEYASLTCYHCSLFHRNVFPKIKEKYIDTGKMLYIFRHFP 83 (226)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHTHHHHHHHHTTTTSEEEEEEECC
T ss_pred CCEEEEEEECCCCHHHHHHHHHHHHHHHHHcccCCeEEEEEEeCC
Confidence 5678999999999999999996 57888888 345777666553
No 426
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=83.95 E-value=1.8 Score=35.12 Aligned_cols=41 Identities=2% Similarity=-0.065 Sum_probs=34.6
Q ss_pred hhccCCcc--ceEEeee-cCeeeEeecCCccHHHHHHHHhCcCC
Q psy1110 42 VCTREKAK--KKVRRQK-NAEVKYVYENGNTKDKIIEFVRNPQA 82 (366)
Q Consensus 42 lc~~~~I~--Pti~~f~-~g~~~~~y~g~r~~~~i~~fi~~~~~ 82 (366)
++.++||. |++.++. +|.....+.|..+.+.|.+++.+.+.
T Consensus 112 ~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 155 (160)
T 3lor_A 112 TMKKYRLEGTPSIILADRKGRIRQVQFGQVDDFVLGLLLGSLLS 155 (160)
T ss_dssp HHHHTTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHHHHHHHT
T ss_pred HHHhcccCccceEEEECCCCcEEEEecCcCCHHHHHHHHHHHHh
Confidence 89999999 9998886 57777888899999999999876554
No 427
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=83.87 E-value=1 Score=39.03 Aligned_cols=37 Identities=19% Similarity=0.128 Sum_probs=31.3
Q ss_pred ccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHH
Q psy1110 280 SLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFM 318 (366)
Q Consensus 280 ~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi 318 (366)
.....++|+|.||+++ +|+.+....|..+.+.+.++|
T Consensus 145 ~~a~~~GV~gtPtf~i--ng~~~~~~s~~~~~e~w~~~l 181 (182)
T 3gn3_A 145 KYARQNGIHVSPTFMI--NGLVQPGMSSGDPVSKWVSDI 181 (182)
T ss_dssp HHHHHHTCCSSSEEEE--TTEECTTCCTTSCHHHHHHHH
T ss_pred HHHHHCCCCccCEEEE--CCEEccCCCCCCCHHHHHHHh
Confidence 5567889999999999 999766678888999988876
No 428
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=83.81 E-value=0.5 Score=40.86 Aligned_cols=42 Identities=21% Similarity=0.313 Sum_probs=34.2
Q ss_pred cccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhC
Q psy1110 277 REKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRD 320 (366)
Q Consensus 277 ~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~ 320 (366)
++......++|+|+||+++ +|+......|..+.+.+.+-|+.
T Consensus 140 ~~~~~a~~~gv~GtPtfvv--ng~~~v~~~Ga~~~e~~~~~i~~ 181 (185)
T 3feu_A 140 NAKMLSEKSGISSVPTFVV--NGKYNVLIGGHDDPKQIADTIRY 181 (185)
T ss_dssp HHHHHHHHHTCCSSSEEEE--TTTEEECGGGCSSHHHHHHHHHH
T ss_pred HHHHHHHHcCCCccCEEEE--CCEEEEecCCCCCHHHHHHHHHH
Confidence 4556778999999999998 99977777888888887776654
No 429
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=83.57 E-value=0.065 Score=45.75 Aligned_cols=85 Identities=12% Similarity=0.088 Sum_probs=61.0
Q ss_pred CcCCcceeeeccccccccccCCC---CCCCCccceeEEEEecccc-----cccccccccc--------------------
Q psy1110 237 SVGRGWELRQVGTGKRIKSINSG---SFSPRQITGILAAVDVTRE-----KSLGKRFDIK-------------------- 288 (366)
Q Consensus 237 ~~~~~~~~~~c~~c~~~~p~~~~---~~~~~~~~v~~a~vd~~~~-----~~l~~~~~I~-------------------- 288 (366)
.+...|.+.||++|+...|.+.+ .|.+ .++.+..++.+.. ..+.+++++.
T Consensus 62 ~vll~F~a~~C~~C~~~~~~l~~l~~~~~~--~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 139 (186)
T 1jfu_A 62 TLLVNLWATWCVPCRKEMPALDELQGKLSG--PNFEVVAINIDTRDPEKPKTFLKEANLTRLGYFNDQKAKVFQDLKAIG 139 (186)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHHHHCB--TTEEEEEEECCCSCTTHHHHHHHHTTCCTTCCEECTTCHHHHHHHTTT
T ss_pred EEEEEEEeCCCHhHHHHHHHHHHHHHHhcc--CCcEEEEEECCCCCHHHHHHHHHHcCCCCCceEECCcchHHHHhcccc
Confidence 34455667889999999998744 3432 3467777776543 3455566653
Q ss_pred ---cCCeEEEe-cCCceeeecCCCCC--HHHHHHHHhCCCC
Q psy1110 289 ---GFPTLKYF-RAGSVAFDAGHLRD--ASRLVEFMRDPTE 323 (366)
Q Consensus 289 ---~~Ptl~~f-k~G~~~~~~~g~~~--~e~l~~fi~~~~~ 323 (366)
++|+++++ ++|+++.++.|..+ .++|.++|++.+.
T Consensus 140 ~~~~~P~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll~ 180 (186)
T 1jfu_A 140 RALGMPTSVLVDPQGCEIATIAGPAEWASEDALKLIRAATG 180 (186)
T ss_dssp CCSSSSEEEEECTTSBEEEEEESCCCTTSHHHHHHHHHHHC
T ss_pred ccCCCCEEEEECCCCCEEEEEecCCccCHHHHHHHHHHHhc
Confidence 89998888 89999999988765 6788888887654
No 430
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=83.37 E-value=1.2 Score=38.34 Aligned_cols=47 Identities=9% Similarity=0.044 Sum_probs=38.0
Q ss_pred cCCeEEEEEEC-CCChhhhcccHHHHHHHHHHhcc-cc-EEEeeccCCcc
Q psy1110 115 EESSVLVMFYA-PWCGHCKKLKPEYEEAAATMKQQ-RA-YYGMGMLRHRP 161 (366)
Q Consensus 115 ~~k~vlV~F~a-~wC~~Ck~~~p~~e~la~~~~~~-v~-~~~v~~~~~~~ 161 (366)
.++.+++.||. .||+.|....+.|.+.+.+++.. +. ++.|+++....
T Consensus 41 ~gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~~~gv~~VigIS~D~~~~ 90 (171)
T 2xhf_A 41 RGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFKEEGYHTIACIAVNDPFV 90 (171)
T ss_dssp TTSEEEEEECSCTTCTTTTSSHHHHHHTHHHHHHTTCCEEEEEESSCHHH
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCCEEEEEeCCCHHH
Confidence 45777888874 59999999999999999999865 75 88899887544
No 431
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=81.70 E-value=0.96 Score=38.25 Aligned_cols=63 Identities=8% Similarity=-0.049 Sum_probs=46.6
Q ss_pred hHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeec--CeeeEeecCCccHHHHHHHHhCcC
Q psy1110 16 PLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKN--AEVKYVYENGNTKDKIIEFVRNPQ 81 (366)
Q Consensus 16 ~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~--g~~~~~y~g~r~~~~i~~fi~~~~ 81 (366)
.+++.+. ..+.+.++|........+.++|+|. |++.++.+ |.....+.| .+.+.+++++.+..
T Consensus 69 ~V~~~l~--~~fv~v~~d~~~~~~~~l~~~y~v~~~P~~~fld~~~G~~l~~~~g-~~~~~fl~~L~~~l 135 (153)
T 2dlx_A 69 AVKNIIR--EHFIFWQVYHDSEEGQRYIQFYKLGDFPYVSILDPRTGQKLVEWHQ-LDVSSFLDQVTGFL 135 (153)
T ss_dssp HHHHHHH--HTEEEEEEESSSHHHHHHHHHHTCCSSSEEEEECTTTCCCCEEESS-CCHHHHHHHHHHHH
T ss_pred HHHHHHH--cCeEEEEEecCCHhHHHHHHHcCCCCCCEEEEEeCCCCcEeeecCC-CCHHHHHHHHHHHH
Confidence 4555554 4678888888655555789999999 99999986 344555666 89999999886654
No 432
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=80.88 E-value=1.2 Score=36.87 Aligned_cols=43 Identities=7% Similarity=-0.097 Sum_probs=33.4
Q ss_pred CcchhccCCcc--ce-EEeeecCeeeEeecCCccHHHHHHHHhCcC
Q psy1110 39 ADPVCTREKAK--KK-VRRQKNAEVKYVYENGNTKDKIIEFVRNPQ 81 (366)
Q Consensus 39 ~~~lc~~~~I~--Pt-i~~f~~g~~~~~y~g~r~~~~i~~fi~~~~ 81 (366)
...++.+++|. |+ +.+.++|.....+.|..+.+.+.+++.+..
T Consensus 114 ~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l 159 (168)
T 2b1k_A 114 DGMLGLDLGVYGAPETFLIDGNGIIRYRHAGDLNPRVWEEEIKPLW 159 (168)
T ss_dssp TCHHHHHHTCCSSSEEEEECTTSBEEEEEESCCCHHHHHHTTHHHH
T ss_pred chHHHHHcCccccCEEEEECCCCeEEEEEeCCCCHHHHHHHHHHHH
Confidence 34799999999 95 555557777778889889999988886644
No 433
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=80.59 E-value=3.5 Score=33.62 Aligned_cols=65 Identities=12% Similarity=0.159 Sum_probs=45.7
Q ss_pred hHHHhhcCCCCeEEEEeeecc-----------------cCCcchhccCCcc--ceEEee-ecCeeeEeecCC--ccHHHH
Q psy1110 16 PLAKEIVKPKAITLGLIERLT-----------------EKADPVCTREKAK--KKVRRQ-KNAEVKYVYENG--NTKDKI 73 (366)
Q Consensus 16 ~la~e~~~~~~I~~~~Vdc~~-----------------~~~~~lc~~~~I~--Pti~~f-~~g~~~~~y~g~--r~~~~i 73 (366)
.+++++.+ .++.+..|++.. ....+++.+++|. |++.++ ++|.....+.|. .+.+++
T Consensus 65 ~~~~~~~~-~~~~~v~v~~d~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~G~~~~~~~~~ 143 (158)
T 3hdc_A 65 RLVKSFPK-GDLVVLAVNVEKRFPEKYRRAPVSFNFLSDATGQVQQRYGANRLPDTFIVDRKGIIRQRVTGGIEWDAPKV 143 (158)
T ss_dssp HHHHHSST-TSEEEEEEECSSSCCGGGGGCCCSCEEEECTTSHHHHHTTCCSSSEEEEECTTSBEEEEEESCCCTTSHHH
T ss_pred HHHHHccc-CCeEEEEEeCCHHHHHHHHHcCCCceEEECchHHHHHHhCCCCcceEEEEcCCCCEEEEEeCCCccchHHH
Confidence 45555542 579999999865 1134899999999 997666 567767788884 466778
Q ss_pred HHHHhCcC
Q psy1110 74 IEFVRNPQ 81 (366)
Q Consensus 74 ~~fi~~~~ 81 (366)
++.+.+..
T Consensus 144 ~~~~~~~~ 151 (158)
T 3hdc_A 144 VSYLKSLE 151 (158)
T ss_dssp HHHHHTTC
T ss_pred HHHHHhhc
Confidence 88776543
No 434
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=80.56 E-value=2.5 Score=33.98 Aligned_cols=68 Identities=7% Similarity=-0.047 Sum_probs=46.9
Q ss_pred chHHHhhcCCCCeEEEEeeecccC--------------------CcchhccCCcc--ceEEee-ecCeeeEeecCC--cc
Q psy1110 15 SPLAKEIVKPKAITLGLIERLTEK--------------------ADPVCTREKAK--KKVRRQ-KNAEVKYVYENG--NT 69 (366)
Q Consensus 15 ~~la~e~~~~~~I~~~~Vdc~~~~--------------------~~~lc~~~~I~--Pti~~f-~~g~~~~~y~g~--r~ 69 (366)
..+++++.. .++.+..|++..+. ...++..++|. |++.++ ++|.....+.|. .+
T Consensus 51 ~~l~~~~~~-~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~ 129 (152)
T 3gl3_A 51 NQMQAKYKA-KGFQVVAVNLDAKTGDAMKFLAQVPAEFTVAFDPKGQTPRLYGVKGMPTSFLIDRNGKVLLQHVGFRPAD 129 (152)
T ss_dssp HHHHHHHGG-GTEEEEEEECCSSHHHHHHHHHHSCCCSEEEECTTCHHHHHTTCCSSSEEEEECTTSBEEEEEESCCTTT
T ss_pred HHHHHHhhc-CCeEEEEEECCCCHHHHHHHHHHcCCCCceeECCcchhHHHcCCCCCCeEEEECCCCCEEEEEccCCCcC
Confidence 345555552 34888888885432 11688999999 998888 467666777774 46
Q ss_pred HHHHHHHHhCcCCc
Q psy1110 70 KDKIIEFVRNPQAT 83 (366)
Q Consensus 70 ~~~i~~fi~~~~~~ 83 (366)
.+.|.+++.+....
T Consensus 130 ~~~l~~~i~~~~~~ 143 (152)
T 3gl3_A 130 KEALEQQILAALGG 143 (152)
T ss_dssp HHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHcc
Confidence 68999999877665
No 435
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=80.44 E-value=1.9 Score=36.68 Aligned_cols=41 Identities=22% Similarity=0.267 Sum_probs=31.5
Q ss_pred ccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCCC
Q psy1110 278 EKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPTE 323 (366)
Q Consensus 278 ~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~~ 323 (366)
+..++..++|+|+||+++ +|+. +.|..+.+.|.++|.....
T Consensus 138 ~~~~a~~~gv~GtPt~vv--nG~~---~~G~~~~~~l~~~i~~~~~ 178 (186)
T 3bci_A 138 DKKIAKDNHIKTTPTAFI--NGEK---VEDPYDYESYEKLLKDKIK 178 (186)
T ss_dssp HHHHHHHTTCCSSSEEEE--TTEE---CSCTTCHHHHHHHHHC---
T ss_pred HHHHHHHcCCCCCCeEEE--CCEE---cCCCCCHHHHHHHHHHHHH
Confidence 345678899999999998 8873 4588899999999987653
No 436
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=80.25 E-value=3.1 Score=33.64 Aligned_cols=42 Identities=0% Similarity=-0.152 Sum_probs=34.5
Q ss_pred chhccCCcc--ceEEeee-cCeeeEeecCCccHHHHHHHHhCcCC
Q psy1110 41 PVCTREKAK--KKVRRQK-NAEVKYVYENGNTKDKIIEFVRNPQA 82 (366)
Q Consensus 41 ~lc~~~~I~--Pti~~f~-~g~~~~~y~g~r~~~~i~~fi~~~~~ 82 (366)
.++..+||. |++.++. +|.....+.|..+.+.|.+++.+.+.
T Consensus 108 ~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 152 (158)
T 3eyt_A 108 RTMAAYQMRGTPSLLLIDKAGDLRAHHFGDVSELLLGAEIATLLG 152 (158)
T ss_dssp HHHHHTTCCSSSEEEEECTTSEEEEEEESCCCHHHHHHHHHHHHT
T ss_pred HHHHHcCCCCCCEEEEECCCCCEEEEEeCCCCHHHHHHHHHHHhc
Confidence 488999999 9988885 67777888899999999998877554
No 437
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=80.18 E-value=0.58 Score=37.98 Aligned_cols=41 Identities=7% Similarity=-0.014 Sum_probs=32.4
Q ss_pred cchhccCCcc--ceEEee-ecCeeeEeecCCccHHHHHHHHhCc
Q psy1110 40 DPVCTREKAK--KKVRRQ-KNAEVKYVYENGNTKDKIIEFVRNP 80 (366)
Q Consensus 40 ~~lc~~~~I~--Pti~~f-~~g~~~~~y~g~r~~~~i~~fi~~~ 80 (366)
..++.+++|. |++.++ ++|.....+.|..+.+.|.+++.+.
T Consensus 107 ~~~~~~~~v~~~P~~~~id~~G~i~~~~~g~~~~~~l~~~l~~~ 150 (156)
T 1kng_A 107 GRASIEWGVYGVPETFVVGREGTIVYKLVGPITPDNLRSVLLPQ 150 (156)
T ss_dssp SHHHHHTTCCSSCEEEEECTTSBEEEEEESCCCHHHHHHTHHHH
T ss_pred hHHHHhcCcCccCeEEEEcCCCCEEEEEeCCCCHHHHHHHHHHH
Confidence 3789999998 965555 6777777888988999888888654
No 438
>3bci_A Disulfide bond protein A; thiol-disulfide oxidoreductase, redox protein, protein folding, redox active centre; 1.81A {Staphylococcus aureus} PDB: 3bd2_A 3bck_A
Probab=79.31 E-value=1 Score=38.33 Aligned_cols=41 Identities=15% Similarity=0.270 Sum_probs=32.0
Q ss_pred CCeEEEEEECCCChhhhcccHHH-HHHHHHHhc--cccEEEeec
Q psy1110 116 ESSVLVMFYAPWCGHCKKLKPEY-EEAAATMKQ--QRAYYGMGM 156 (366)
Q Consensus 116 ~k~vlV~F~a~wC~~Ck~~~p~~-e~la~~~~~--~v~~~~v~~ 156 (366)
.+..++.|+-..|++|..+.+.+ ..|.+.|.+ ++.+.....
T Consensus 11 a~~~i~~f~D~~Cp~C~~~~~~l~~~l~~~~~~~~~v~~~~~~~ 54 (186)
T 3bci_A 11 GKPLVVVYGDYKCPYCKELDEKVMPKLRKNYIDNHKVEYQFVNL 54 (186)
T ss_dssp CCCEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSSEEEEEEC
T ss_pred CCeEEEEEECCCChhHHHHHHHHHHHHHHHhccCCeEEEEEEec
Confidence 46789999999999999999998 578788853 466655443
No 439
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=78.93 E-value=3.9 Score=32.99 Aligned_cols=61 Identities=8% Similarity=-0.051 Sum_probs=39.5
Q ss_pred hHHHhhcCCCCeEEEEeeecccC-----------------------CcchhccCCcc--ceEEeee-cCeeeEeecCCcc
Q psy1110 16 PLAKEIVKPKAITLGLIERLTEK-----------------------ADPVCTREKAK--KKVRRQK-NAEVKYVYENGNT 69 (366)
Q Consensus 16 ~la~e~~~~~~I~~~~Vdc~~~~-----------------------~~~lc~~~~I~--Pti~~f~-~g~~~~~y~g~r~ 69 (366)
.+++++.. .++.+..|+++.+. ...++.++||. ||+.++. +|.....+.+
T Consensus 53 ~l~~~~~~-~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~~--- 128 (152)
T 2lrn_A 53 KTYNAFKD-KGFTIYGVSTDRREEDWKKAIEEDKSYWNQVLLQKDDVKDVLESYCIVGFPHIILVDPEGKIVAKELR--- 128 (152)
T ss_dssp HHHHHHTT-TTEEEEEEECCSCHHHHHHHHHHHTCCSEEEEECHHHHHHHHHHTTCCSSCEEEEECTTSEEEEECCC---
T ss_pred HHHHHhcc-CCeEEEEEEccCCHHHHHHHHHHhCCCCeEEecccchhHHHHHHhCCCcCCeEEEECCCCeEEEeeCC---
Confidence 34555542 35999999986521 34799999999 9998884 5665555433
Q ss_pred HHHHHHHHhCc
Q psy1110 70 KDKIIEFVRNP 80 (366)
Q Consensus 70 ~~~i~~fi~~~ 80 (366)
.+.+.+++++.
T Consensus 129 ~~~l~~~l~~l 139 (152)
T 2lrn_A 129 GDDLYNTVEKF 139 (152)
T ss_dssp TTHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 34455555443
No 440
>3gn3_A Putative protein-disulfide isomerase; MCSG, PSI, structural GEN protein structure initiative, midwest center for structural genomics; 2.50A {Pseudomonas syringae PV}
Probab=78.18 E-value=1 Score=38.92 Aligned_cols=41 Identities=12% Similarity=0.094 Sum_probs=32.1
Q ss_pred cCCeEEEEEECCCChhhhcccHHHHHHHHHH-hccccEEEee
Q psy1110 115 EESSVLVMFYAPWCGHCKKLKPEYEEAAATM-KQQRAYYGMG 155 (366)
Q Consensus 115 ~~k~vlV~F~a~wC~~Ck~~~p~~e~la~~~-~~~v~~~~v~ 155 (366)
....+++.|.-..|++|+++.+.+..+.+++ .+++.++.-+
T Consensus 13 ~a~vtiv~f~D~~Cp~C~~~~~~~~~~l~~~~~g~v~~v~r~ 54 (182)
T 3gn3_A 13 HGPRLFEVFLEPTCPFSVKAFFKLDDLLAQAGEDNVTVRIRL 54 (182)
T ss_dssp CCSEEEEEEECTTCHHHHHHHTTHHHHHHHHCTTTEEEEEEE
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHHHhCCCCEEEEEEE
Confidence 3567788999999999999999988877766 5666666544
No 441
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=77.30 E-value=3.8 Score=32.92 Aligned_cols=68 Identities=9% Similarity=0.022 Sum_probs=45.5
Q ss_pred chHHHhhcCCCCeEEEEeeeccc---------------------CCcchhccCCcc--ceEEee-ecCeeeEeecCCc--
Q psy1110 15 SPLAKEIVKPKAITLGLIERLTE---------------------KADPVCTREKAK--KKVRRQ-KNAEVKYVYENGN-- 68 (366)
Q Consensus 15 ~~la~e~~~~~~I~~~~Vdc~~~---------------------~~~~lc~~~~I~--Pti~~f-~~g~~~~~y~g~r-- 68 (366)
..+++++.+ .++.+..|++... ....++.+++|. |++.++ ++|.....+.|..
T Consensus 51 ~~~~~~~~~-~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~ 129 (154)
T 3kcm_A 51 MRLNAAMAG-KPFRMLCVSIDEGGKVAVEEFFRKTGFTLPVLLDADKRVGKLYGTTGVPETFVIDRHGVILKKVVGAMEW 129 (154)
T ss_dssp HHHHHHTTT-SSEEEEEEECCTTHHHHHHHHHHHHCCCCCEEECTTCHHHHHHTCCSBCEEEEECTTSBEEEEEESCCCT
T ss_pred HHHHHHhcc-CCeEEEEEEcCCcchHHHHHHHHHcCCCeeEEecCchHHHHHhCCCCCCeEEEECCCCcEEEEEcCCCcc
Confidence 345555542 4688888888653 112488999999 966555 5677777788854
Q ss_pred cHHHHHHHHhCcCCc
Q psy1110 69 TKDKIIEFVRNPQAT 83 (366)
Q Consensus 69 ~~~~i~~fi~~~~~~ 83 (366)
+.+.+.+++.+....
T Consensus 130 ~~~~l~~~l~~l~~~ 144 (154)
T 3kcm_A 130 DHPEVIAFLNNELSK 144 (154)
T ss_dssp TSHHHHHHHHTC---
T ss_pred ccHHHHHHHHHHHHH
Confidence 777999999886554
No 442
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=76.23 E-value=5.3 Score=35.09 Aligned_cols=41 Identities=24% Similarity=0.259 Sum_probs=31.4
Q ss_pred CCeEEEEEECCCChhhhcccHHHHHH-HHHH--hccccEEEeec
Q psy1110 116 ESSVLVMFYAPWCGHCKKLKPEYEEA-AATM--KQQRAYYGMGM 156 (366)
Q Consensus 116 ~k~vlV~F~a~wC~~Ck~~~p~~e~l-a~~~--~~~v~~~~v~~ 156 (366)
.+.+||.|.-..|++|+++.+.+... .+.| .++++++.-+.
T Consensus 15 a~vtivef~D~~Cp~C~~~~~~~~~~l~~~~i~~g~v~~v~r~~ 58 (205)
T 3gmf_A 15 AKLRLVEFVSYTCPHCSHFEIESEGQLKIGMVQPGKGAIEVRNF 58 (205)
T ss_dssp CSEEEEEEECTTCHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEC
T ss_pred CCeEEEEEECCCCHHHHHHHHHHHHHHHHHhccCCeEEEEEEeC
Confidence 57789999999999999999877554 4477 45577776554
No 443
>3c7m_A Thiol:disulfide interchange protein DSBA-like; redox protein, periplasm, redox-active center, oxidoreductase; HET: PGE; 1.55A {Escherichia coli} PDB: 3l9u_A
Probab=75.60 E-value=1.4 Score=37.53 Aligned_cols=42 Identities=14% Similarity=0.280 Sum_probs=31.6
Q ss_pred cccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhC
Q psy1110 277 REKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRD 320 (366)
Q Consensus 277 ~~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~ 320 (366)
.+...+..++|+|+||+++ +|+......|..+.+.|.+.|+.
T Consensus 150 ~~~~~a~~~gv~gtPt~~i--ng~~~~~~~g~~~~~~l~~~i~~ 191 (195)
T 3c7m_A 150 KWKASYDVAKIQGVPAYVV--NGKYLIYTKSIKSIDAMADLIRE 191 (195)
T ss_dssp HGGGHHHHHHHHCSSEEEE--TTTEEECGGGCCCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCccCEEEE--CCEEEeccCCCCCHHHHHHHHHH
Confidence 3455677899999999887 88855445577788888877764
No 444
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=75.35 E-value=3 Score=35.30 Aligned_cols=43 Identities=12% Similarity=-0.031 Sum_probs=32.3
Q ss_pred cchhccCCcc--ceEEeee-cCeeeEe---------ecCCccHHHHHHHHhCcCC
Q psy1110 40 DPVCTREKAK--KKVRRQK-NAEVKYV---------YENGNTKDKIIEFVRNPQA 82 (366)
Q Consensus 40 ~~lc~~~~I~--Pti~~f~-~g~~~~~---------y~g~r~~~~i~~fi~~~~~ 82 (366)
..++.+++|. |++.++. +|..... +.|..+.+.|.+.+.+...
T Consensus 120 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~~~~~~~~~~g~~~~~~l~~~i~~ll~ 174 (196)
T 2ywi_A 120 QEVAKAYDAACTPDFYIFDRDLKCVYRGQLDDSRPNNGIPVTGESIRAALDALLE 174 (196)
T ss_dssp CHHHHHHTCCEESEEEEEETTCBEEEEECSSSCCTTTCCCCCCHHHHHHHHHHHH
T ss_pred hHHHHHhCCCCCCeEEEEcCCCeEEEccccCcccccccCccCHHHHHHHHHHHHc
Confidence 3789999998 9998986 4555555 4577788888888876544
No 445
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=74.91 E-value=1.7 Score=33.49 Aligned_cols=62 Identities=10% Similarity=0.034 Sum_probs=42.8
Q ss_pred CchHHHhhcCCCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCcCC
Q psy1110 14 TSPLAKEIVKPKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNPQA 82 (366)
Q Consensus 14 ~~~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~~~ 82 (366)
+.++-+++. .+|.+..||.......++..++| . |++ |.+|... .-+..+.+.|.+++.....
T Consensus 33 ~~~~L~~l~--~~i~~~~vdi~~~~~~el~~~~g-~~vP~l--~~~g~~~--~~~g~~~~~l~~~l~~~~~ 96 (100)
T 1wjk_A 33 AKEVLQPYK--DRFILQEVDITLPENSTWYERYK-FDIPVF--HLNGQFL--MMHRVNTSKLEKQLRKLSG 96 (100)
T ss_dssp HHHHTSTTS--SSSEEEEEETTSSTTHHHHHHSS-SSCSEE--EESSSEE--EESSCCHHHHHHHHHSSSC
T ss_pred HHHHHHHhh--hCCeEEEEECCCcchHHHHHHHC-CCCCEE--EECCEEE--EecCCCHHHHHHHHHHHHh
Confidence 334444444 45999999996224468999999 7 987 4566543 3456888999999987654
No 446
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=74.65 E-value=1.8 Score=40.30 Aligned_cols=29 Identities=21% Similarity=0.505 Sum_probs=25.2
Q ss_pred CCeEEEEEECCCChhhhcccHHHHHHHHH
Q psy1110 116 ESSVLVMFYAPWCGHCKKLKPEYEEAAAT 144 (366)
Q Consensus 116 ~k~vlV~F~a~wC~~Ck~~~p~~e~la~~ 144 (366)
++.+++.|+-+.|++|+++.+.+++..+.
T Consensus 147 gk~~I~vFtDp~CPYCkkl~~~l~~~l~~ 175 (273)
T 3tdg_A 147 KDKILYIVSDPMCPHCQKELTKLRDHLKE 175 (273)
T ss_dssp TTCEEEEEECTTCHHHHHHHHTHHHHHHH
T ss_pred CCeEEEEEECcCChhHHHHHHHHHHHhhC
Confidence 67899999999999999999999865543
No 447
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=73.49 E-value=4.5 Score=33.05 Aligned_cols=40 Identities=3% Similarity=0.058 Sum_probs=30.3
Q ss_pred chhccCCcc--ceEEeeecCeeeEeecCCc-cHHHHHHHHhCcC
Q psy1110 41 PVCTREKAK--KKVRRQKNAEVKYVYENGN-TKDKIIEFVRNPQ 81 (366)
Q Consensus 41 ~lc~~~~I~--Pti~~f~~g~~~~~y~g~r-~~~~i~~fi~~~~ 81 (366)
.++.+++|. |++.++.+.+.... .|.. +.+.|.+++.+..
T Consensus 121 ~~~~~~~v~~~P~~~lid~~G~i~~-~g~~~~~~~l~~~l~~l~ 163 (165)
T 3ha9_A 121 SLVEKFNVRSIDYIVIMDKSSNVLY-AGTTPSLGELESVIKSVQ 163 (165)
T ss_dssp HHHHHTTCCSSSEEEEEETTCCEEE-EEESCCHHHHHHHHHHC-
T ss_pred HHHHHhCCCCceEEEEEcCCCcEEE-eCCCCCHHHHHHHHHHHh
Confidence 789999999 99999965433333 7877 8999999887643
No 448
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=72.28 E-value=6.2 Score=31.70 Aligned_cols=61 Identities=13% Similarity=0.013 Sum_probs=40.5
Q ss_pred hHHHhhcCCCCeEEEEeeecccC-----------------------CcchhccCCcc--ceEEeee-cCeeeEeecCCcc
Q psy1110 16 PLAKEIVKPKAITLGLIERLTEK-----------------------ADPVCTREKAK--KKVRRQK-NAEVKYVYENGNT 69 (366)
Q Consensus 16 ~la~e~~~~~~I~~~~Vdc~~~~-----------------------~~~lc~~~~I~--Pti~~f~-~g~~~~~y~g~r~ 69 (366)
.+++++.+..++.+..|+++.+. ...++..+||. |++.++. +|.....+. +
T Consensus 59 ~l~~~~~~~~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~---~ 135 (150)
T 3fw2_A 59 EIYKKYKKNKYIGMLGISLDVDKQQWKDAIKRDTLDWEQVCDFGGLNSEVAKQYSIYKIPANILLSSDGKILAKNL---R 135 (150)
T ss_dssp HHHHHHTTCSSEEEEEEECCSCHHHHHHHHHHTTCCSEEECCSCGGGCHHHHHTTCCSSSEEEEECTTSBEEEESC---C
T ss_pred HHHHHhccCCCeEEEEEEcCCCHHHHHHHHHHhCCCceEEEcCcccchHHHHHcCCCccCeEEEECCCCEEEEccC---C
Confidence 45566623356888888886542 23789999999 9999995 565444543 5
Q ss_pred HHHHHHHHhC
Q psy1110 70 KDKIIEFVRN 79 (366)
Q Consensus 70 ~~~i~~fi~~ 79 (366)
.+.+.+.+.+
T Consensus 136 ~~~l~~~l~~ 145 (150)
T 3fw2_A 136 GEELKKKIEN 145 (150)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 5666666543
No 449
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=71.40 E-value=3.2 Score=41.61 Aligned_cols=69 Identities=16% Similarity=-0.013 Sum_probs=50.8
Q ss_pred cCCCCCCchHHHhhcC-CCCeEEEEeeecccCCcchhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCcCC
Q psy1110 8 TLNKEDTSPLAKEIVK-PKAITLGLIERLTEKADPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNPQA 82 (366)
Q Consensus 8 ~~~~~~~~~la~e~~~-~~~I~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~~~ 82 (366)
|=++..+.|+..+++. .++|++.+||..+ +.+++.++||. ||+.+ +|+.. ..|..+.+.|.+++.....
T Consensus 129 C~~C~~~~~~l~~~a~~~~~v~~~~vd~~~--~~~~~~~~~i~svPt~~i--~g~~~--~~G~~~~~~l~~~l~~~~~ 200 (521)
T 1hyu_A 129 CHNCPDVVQALNLMAVLNPRIKHTAIDGGT--FQNEITERNVMGVPAVFV--NGKEF--GQGRMTLTEIVAKVDTGAE 200 (521)
T ss_dssp CSSHHHHHHHHHHHHHHCTTEEEEEEETTT--CHHHHHHTTCCSSSEEEE--TTEEE--EESCCCHHHHHHHHCCSSC
T ss_pred CcCcHHHHHHHHHHHhHcCceEEEEEechh--hHHHHHHhCCCccCEEEE--CCEEE--ecCCCCHHHHHHHHhhccc
Confidence 4445555566555542 2489999999954 66999999999 99966 67644 3488899999999987543
No 450
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=70.74 E-value=0.56 Score=38.46 Aligned_cols=56 Identities=9% Similarity=0.127 Sum_probs=34.3
Q ss_pred ceeeeccccccccccCCCCCCCCccceeEEEEecccc-------cccccccccccCCeEEEecCCcee
Q psy1110 242 WELRQVGTGKRIKSINSGSFSPRQITGILAAVDVTRE-------KSLGKRFDIKGFPTLKYFRAGSVA 302 (366)
Q Consensus 242 ~~~~~c~~c~~~~p~~~~~~~~~~~~v~~a~vd~~~~-------~~l~~~~~I~~~Ptl~~fk~G~~~ 302 (366)
|+..||++|++....|.+... .++.+..+|.+.. ..+....+.+.+|++++ +|+.+
T Consensus 19 ysk~~Cp~C~~ak~lL~~~~~---~~v~~~~idid~~~d~~~~~~~l~~~~G~~tVP~IfI--~G~~I 81 (127)
T 3l4n_A 19 FSKSTCSYSKGMKELLENEYQ---FIPNYYIIELDKHGHGEELQEYIKLVTGRGTVPNLLV--NGVSR 81 (127)
T ss_dssp EECTTCHHHHHHHHHHHHHEE---EESCCEEEEGGGSTTHHHHHHHHHHHHSCCSSCEEEE--TTEEC
T ss_pred EEcCCCccHHHHHHHHHHhcc---cCCCcEEEEecCCCCHHHHHHHHHHHcCCCCcceEEE--CCEEE
Confidence 556789999999999854210 0123344444322 12334457789999987 88754
No 451
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=70.56 E-value=5.7 Score=32.29 Aligned_cols=63 Identities=14% Similarity=0.034 Sum_probs=44.1
Q ss_pred hHHHhhcCCCCeEEEEeeecccCC---------------------cchhccCCcc--ceEEeee-cCeeeEeecCCccHH
Q psy1110 16 PLAKEIVKPKAITLGLIERLTEKA---------------------DPVCTREKAK--KKVRRQK-NAEVKYVYENGNTKD 71 (366)
Q Consensus 16 ~la~e~~~~~~I~~~~Vdc~~~~~---------------------~~lc~~~~I~--Pti~~f~-~g~~~~~y~g~r~~~ 71 (366)
.+++++.. .++.+..|+++.... ..++.+++|. |++.++. +|.....+.|..+.+
T Consensus 59 ~l~~~~~~-~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~e 137 (152)
T 2lrt_A 59 ELYNKYAS-QGFEIYQISLDGDEHFWKTSADNLPWVCVRDANGAYSSYISLYNVTNLPSVFLVNRNNELSARGENIKDLD 137 (152)
T ss_dssp HHHHHHGG-GTEEEEEEECSCCHHHHHHHHTTCSSEEEECSSGGGCHHHHHHTCCSCSEEEEEETTTEEEEETTTCSCHH
T ss_pred HHHHHhcc-CCeEEEEEEccCCHHHHHHHHhCCCceEEECCCCcchHHHHHcCcccCceEEEECCCCeEEEecCCHHHHH
Confidence 45566653 358888888865320 0288899998 9999996 577677888988887
Q ss_pred HHHHHHhC
Q psy1110 72 KIIEFVRN 79 (366)
Q Consensus 72 ~i~~fi~~ 79 (366)
+.+.-..+
T Consensus 138 ~~~~~~~~ 145 (152)
T 2lrt_A 138 EAIKKLLE 145 (152)
T ss_dssp HHHHHHHG
T ss_pred HHHHHHHh
Confidence 76665543
No 452
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=70.19 E-value=5.9 Score=37.97 Aligned_cols=66 Identities=6% Similarity=-0.037 Sum_probs=48.7
Q ss_pred hHHHhhcCCCCeEEEEeeecc-------------------------cCCcchhccCCcc--ceEEee-ecCeeeEeecCC
Q psy1110 16 PLAKEIVKPKAITLGLIERLT-------------------------EKADPVCTREKAK--KKVRRQ-KNAEVKYVYENG 67 (366)
Q Consensus 16 ~la~e~~~~~~I~~~~Vdc~~-------------------------~~~~~lc~~~~I~--Pti~~f-~~g~~~~~y~g~ 67 (366)
.+++++.. .++.|..|+|+. .....++++++|. |++.++ ++|.....+.|.
T Consensus 106 ~l~~~~~~-~~v~vi~Vs~d~~~~~d~~~~~~~~~~~~~l~fpv~~D~~~~l~~~ygV~~~Pt~~lID~~G~Iv~~~~G~ 184 (352)
T 2hyx_A 106 GWYQAYKD-SGLAVIGVHTPEYAFEKVPGNVAKGAANLGISYPIALDNNYATWTNYRNRYWPAEYLIDATGTVRHIKFGE 184 (352)
T ss_dssp HHHHHHGG-GTEEEEEEECCSSGGGGCHHHHHHHHHHHTCCSCEEECTTSHHHHHTTCCEESEEEEECTTSBEEEEEESB
T ss_pred HHHHHhhc-CCeEEEEEECCcccccCCHHHHHHHHHHcCCCccEEeCCcHHHHHHcCCCccCEEEEEeCCCeEEEEEcCC
Confidence 45566652 368888888742 1123789999999 998888 567777888898
Q ss_pred ccHHHHHHHHhCcCC
Q psy1110 68 NTKDKIIEFVRNPQA 82 (366)
Q Consensus 68 r~~~~i~~fi~~~~~ 82 (366)
.+.+.|.++|.+.+.
T Consensus 185 ~~~~~l~~~I~~lL~ 199 (352)
T 2hyx_A 185 GDYNVTETLVRQLLN 199 (352)
T ss_dssp CCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh
Confidence 899999999877543
No 453
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=69.17 E-value=5.9 Score=33.25 Aligned_cols=44 Identities=9% Similarity=-0.004 Sum_probs=29.3
Q ss_pred cchhccCCcc--ceEEeeec-CeeeEe--------ecCCccHHHHHHHHhCcCCc
Q psy1110 40 DPVCTREKAK--KKVRRQKN-AEVKYV--------YENGNTKDKIIEFVRNPQAT 83 (366)
Q Consensus 40 ~~lc~~~~I~--Pti~~f~~-g~~~~~--------y~g~r~~~~i~~fi~~~~~~ 83 (366)
..++..++|. |++.++.+ |..... +.|..+.+.|.+.+.+....
T Consensus 106 ~~~~~~~~v~~~P~~~lid~~G~i~~~g~~~~~~~~~g~~~~~~l~~~i~~ll~~ 160 (188)
T 2cvb_A 106 QEVAKAYRALRTPEVFLFDERRLLRYHGRVNDNPKDPSKVQSHDLEAAIEALLRG 160 (188)
T ss_dssp SHHHHHTTCCEESEEEEECTTCBEEEEECSSSCTTCGGGCCCCHHHHHHHHHHTT
T ss_pred chHHHHcCCCCCCeEEEECCCCcEEEEEecCCccccccccCHHHHHHHHHHHHcC
Confidence 3789999999 99988854 543333 22334677788888765543
No 454
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=68.80 E-value=2.3 Score=36.68 Aligned_cols=41 Identities=7% Similarity=-0.147 Sum_probs=32.0
Q ss_pred hHHHhhcCCCCeEEEEeeecccCCcchhccC--------Ccc--ceEEeeec-Cee
Q psy1110 16 PLAKEIVKPKAITLGLIERLTEKADPVCTRE--------KAK--KKVRRQKN-AEV 60 (366)
Q Consensus 16 ~la~e~~~~~~I~~~~Vdc~~~~~~~lc~~~--------~I~--Pti~~f~~-g~~ 60 (366)
.+|+.+. ..+.+.+||..+ ..++...+ ||. ||+.+|.+ |..
T Consensus 66 ~va~~l~--~~fv~ikVD~de--~~~l~~~y~~~~q~~~gv~g~Pt~v~l~~dG~~ 117 (173)
T 3ira_A 66 EVAGLMN--EAFVSIKVDREE--RPDIDNIYMTVCQIILGRGGWPLNIIMTPGKKP 117 (173)
T ss_dssp HHHHHHH--HHCEEEEEETTT--CHHHHHHHHHHHHHHHSCCCSSEEEEECTTSCE
T ss_pred HHHHHHH--hcCceeeeCCcc--cCcHHHHHHHHHHHHcCCCCCcceeeECCCCCc
Confidence 5677776 578899999955 45888888 888 99999984 543
No 455
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=68.72 E-value=4.1 Score=34.10 Aligned_cols=53 Identities=8% Similarity=0.065 Sum_probs=34.9
Q ss_pred EEEEeeecccCCcchhccCCcc--ceEEeee-cCeeeEeecCC----------ccHHHHHHHHhCcC
Q psy1110 28 TLGLIERLTEKADPVCTREKAK--KKVRRQK-NAEVKYVYENG----------NTKDKIIEFVRNPQ 81 (366)
Q Consensus 28 ~~~~Vdc~~~~~~~lc~~~~I~--Pti~~f~-~g~~~~~y~g~----------r~~~~i~~fi~~~~ 81 (366)
.|..|+.+.+ ..+++.+++|. ||+.+|+ +|.......|. .+.++|++.|++..
T Consensus 79 ~fv~V~vD~e-~~~~~~~~~v~~~PT~~f~~~~G~~v~~~~G~~~~~~~~~~~~~~~~ll~~~~~al 144 (151)
T 3ph9_A 79 KFIMLNLMHE-TTDKNLSPDGQYVPRIMFVDPSLTVRADIAGRYSNRLYTYEPRDLPLLIENMKKAL 144 (151)
T ss_dssp TCEEEEESSC-CSCGGGCTTCCCSSEEEEECTTSCBCTTCCCSCTTSTTCCCGGGHHHHHHHHHHHH
T ss_pred CeEEEEecCC-chhhHhhcCCCCCCEEEEECCCCCEEEEEeCCcCCcccccchhhHHHHHHHHHHHH
Confidence 4555555322 23678899999 9999998 67666666665 35566776665543
No 456
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=67.73 E-value=1.4 Score=42.68 Aligned_cols=22 Identities=14% Similarity=0.051 Sum_probs=15.9
Q ss_pred ccccccccccCCeEEEecCCceee
Q psy1110 280 SLGKRFDIKGFPTLKYFRAGSVAF 303 (366)
Q Consensus 280 ~l~~~~~I~~~Ptl~~fk~G~~~~ 303 (366)
.+.+..+.+.+|.+++ +|+.+.
T Consensus 309 ~L~~~tG~~TVPqVFI--~Gk~IG 330 (362)
T 2jad_A 309 ALYEINGQRTVPNIYI--NGKHIG 330 (362)
T ss_dssp HHHHHHCCCSSCEEEE--TTEEEE
T ss_pred HHHHHHCCCCcCEEEE--CCEEEE
Confidence 4445667889999877 888553
No 457
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=67.67 E-value=10 Score=29.77 Aligned_cols=62 Identities=3% Similarity=0.103 Sum_probs=39.6
Q ss_pred HHHhhcCCCCeEEEEeeecccCC--------------------cch--hccCCcc--ceEEeeecCeeeEeecCCccHHH
Q psy1110 17 LAKEIVKPKAITLGLIERLTEKA--------------------DPV--CTREKAK--KKVRRQKNAEVKYVYENGNTKDK 72 (366)
Q Consensus 17 la~e~~~~~~I~~~~Vdc~~~~~--------------------~~l--c~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~ 72 (366)
+++++.. .++.+..|+.+.+.. ..+ ...++|. |++.++.+.+.. .+ +..+.++
T Consensus 55 l~~~~~~-~~~~~v~v~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~~P~~~lid~~G~i-~~-~~~~~~~ 131 (142)
T 3ewl_A 55 FVEMVEN-GTLRVLAIYPDENREEWATKAVYMPQGWIVGWNKAGDIRTRQLYDIRATPTIYLLDGRKRV-IL-KDTSMEQ 131 (142)
T ss_dssp HHHHHHH-TSEEEEEEECSSCHHHHHHHHTTSCTTCEEEECTTCHHHHTTCSCCCSSSEEEEECTTCBE-EE-CSCCHHH
T ss_pred HHHHhcc-CCeEEEEEEecCCHHHHHHHHHHcCCCcceeeCCccchhhHHHcCCCCCCeEEEECCCCCE-Ee-cCCCHHH
Confidence 5556553 468888888753220 011 4489999 999999644322 33 5678999
Q ss_pred HHHHHhCcC
Q psy1110 73 IIEFVRNPQ 81 (366)
Q Consensus 73 i~~fi~~~~ 81 (366)
|.+++.+..
T Consensus 132 l~~~l~~~~ 140 (142)
T 3ewl_A 132 LIDYLATQA 140 (142)
T ss_dssp HHHHHHC--
T ss_pred HHHHHHHHc
Confidence 999997653
No 458
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=66.39 E-value=5.4 Score=31.88 Aligned_cols=46 Identities=7% Similarity=0.058 Sum_probs=33.2
Q ss_pred chHHHhhcCCCCeEEEEeeecccC----------------------CcchhccCCcc--ceEEeee--cCee
Q psy1110 15 SPLAKEIVKPKAITLGLIERLTEK----------------------ADPVCTREKAK--KKVRRQK--NAEV 60 (366)
Q Consensus 15 ~~la~e~~~~~~I~~~~Vdc~~~~----------------------~~~lc~~~~I~--Pti~~f~--~g~~ 60 (366)
..+++++....++.+..|+++.+. ...++++++|. ||+.++. +|..
T Consensus 51 ~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~Pt~~lid~~~G~i 122 (146)
T 1o8x_A 51 IEFYDKFHESKNFEVVFCTWDEEEDGFAGYFAKMPWLAVPFAQSEAVQKLSKHFNVESIPTLIGVDADSGDV 122 (146)
T ss_dssp HHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCGGGHHHHHHHHHHTTCCSSSEEEEEETTTCCE
T ss_pred HHHHHHhhhcCCeEEEEEeCCCCHHHHHHHHHHCCceeeccchhhHHHHHHHHhCCCCCCEEEEEECCCCeE
Confidence 356666664357899999886531 24799999998 9999997 4543
No 459
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=63.96 E-value=0.35 Score=41.20 Aligned_cols=84 Identities=7% Similarity=-0.080 Sum_probs=57.3
Q ss_pred CcCCcceeeeccccccccccCCC---CCCCCccceeEEEEeccc--------c---ccccc-------------------
Q psy1110 237 SVGRGWELRQVGTGKRIKSINSG---SFSPRQITGILAAVDVTR--------E---KSLGK------------------- 283 (366)
Q Consensus 237 ~~~~~~~~~~c~~c~~~~p~~~~---~~~~~~~~v~~a~vd~~~--------~---~~l~~------------------- 283 (366)
.+...|.+.||++|++..|.+.+ .|.+. ++.+..++++. . ..+++
T Consensus 51 ~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~--~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~g~~ 128 (181)
T 2p31_A 51 VSLVVNVASECGFTDQHYRALQQLQRDLGPH--HFNVLAFPCNQFGQQEPDSNKEIESFARRTYSVSFPMFSKIAVTGTG 128 (181)
T ss_dssp EEEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TEEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCCCSSTT
T ss_pred EEEEEEeccCCCCcHHHHHHHHHHHHHhhcC--CEEEEEEECcCCCCCCCCCHHHHHHHHHhhcCCCceeEeecccCCcc
Confidence 34455667789999999998744 44432 36777776532 0 01111
Q ss_pred -----ccccccCC-------e-EEEecCCceeeecCCCCCHHHHHHHHhCCC
Q psy1110 284 -----RFDIKGFP-------T-LKYFRAGSVAFDAGHLRDASRLVEFMRDPT 322 (366)
Q Consensus 284 -----~~~I~~~P-------t-l~~fk~G~~~~~~~g~~~~e~l~~fi~~~~ 322 (366)
.|.+.++| + +++.++|+++.++.|..+.++|.+.|++.+
T Consensus 129 ~~~~~~~~~~~~P~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 180 (181)
T 2p31_A 129 AHPAFKYLAQTSGKEPTWNFWKYLVAPDGKVVGAWDPTVSVEEVRPQITALV 180 (181)
T ss_dssp SCHHHHHHHHHHSCCCCSTTCEEEECTTSCEEEEECTTSCHHHHHHHHHTTC
T ss_pred chhhhhhhhhcCCCccccceeEEEEcCCCCEEEEeCCCCCHHHHHHHHHHHh
Confidence 23467789 4 555599999999999999999999998764
No 460
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=63.85 E-value=1.8 Score=33.42 Aligned_cols=63 Identities=5% Similarity=0.095 Sum_probs=39.7
Q ss_pred CchHHHhhcCCCCeEEEEeeecccC---CcchhccCCcc--ceEEeeecCeeeEeecCCc---cHHHHHHHHhCc
Q psy1110 14 TSPLAKEIVKPKAITLGLIERLTEK---ADPVCTREKAK--KKVRRQKNAEVKYVYENGN---TKDKIIEFVRNP 80 (366)
Q Consensus 14 ~~~la~e~~~~~~I~~~~Vdc~~~~---~~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r---~~~~i~~fi~~~ 80 (366)
+.++-.++. ..+.+..||...+. ...++.++||. ||+ |.+|.....|.|.. +.+.|.+++.+.
T Consensus 36 ~~~~l~~~~--~~~~~v~v~~~~~~~~~~~~l~~~~~v~~~Pt~--~~~g~~v~~~~~~~~~~~~~~l~~~l~~~ 106 (116)
T 2e7p_A 36 VKQLLTQVG--ASYKVVELDELSDGSQLQSALAHWTGRGTVPNV--FIGGKQIGGCDTVVEKHQRNELLPLLQDA 106 (116)
T ss_dssp HHHHHHHHT--CCCEEEEGGGSTTHHHHHHHHHHHHSCCSSCEE--EETTEEEECHHHHHHHHHTTCHHHHHHHT
T ss_pred HHHHHHHcC--CCeEEEEccCCCChHHHHHHHHHHhCCCCcCEE--EECCEEECChHHHHHHHhCChHHHHHHHc
Confidence 344445554 34566666663320 13599999998 999 56787666666544 666788888654
No 461
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=63.64 E-value=0.43 Score=39.74 Aligned_cols=82 Identities=10% Similarity=0.010 Sum_probs=51.9
Q ss_pred cCCcceeee-ccccccccccCCCCCCCCccceeEEEEecc-----------------------ccccccccccccc----
Q psy1110 238 VGRGWELRQ-VGTGKRIKSINSGSFSPRQITGILAAVDVT-----------------------REKSLGKRFDIKG---- 289 (366)
Q Consensus 238 ~~~~~~~~~-c~~c~~~~p~~~~~~~~~~~~v~~a~vd~~-----------------------~~~~l~~~~~I~~---- 289 (366)
+...|.+.| |++|....|.+.+.++.. .++.+..++.+ .+..+.+.|++..
T Consensus 47 ~vl~F~~~~~C~~C~~~~~~l~~l~~~~-~~~~vv~is~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~v~~~~~g 125 (167)
T 2jsy_A 47 TIISVIPSIDTGVCDAQTRRFNEEAAKL-GDVNVYTISADLPFAQARWCGANGIDKVETLSDHRDMSFGEAFGVYIKELR 125 (167)
T ss_dssp EEEEECSCSTTSHHHHTHHHHHHHHHHH-SSCEEEEEECSSGGGTSCCGGGSSCTTEEEEEGGGTCHHHHHTTCBBTTTC
T ss_pred EEEEEecCCCCCchHHHHHHHHHHHHHc-CCCEEEEEECCCHHHHHHHHHhcCCCCceEeeCCchhHHHHHhCCccccCC
Confidence 344455667 999999999864422221 33555555433 2345666778876
Q ss_pred --CCeEEEe-cCCceeeecCCC-----CCHHHHHHHHhC
Q psy1110 290 --FPTLKYF-RAGSVAFDAGHL-----RDASRLVEFMRD 320 (366)
Q Consensus 290 --~Ptl~~f-k~G~~~~~~~g~-----~~~e~l~~fi~~ 320 (366)
.|+++++ ++|+++..+.|. .+.+++++.|++
T Consensus 126 ~~~p~~~lid~~G~i~~~~~g~~~~~~~~~~~l~~~l~~ 164 (167)
T 2jsy_A 126 LLARSVFVLDENGKVVYAEYVSEATNHPNYEKPIEAAKA 164 (167)
T ss_dssp SBCCEEEEECTTSCEEEEEECSBTTSCCCSHHHHHHHHH
T ss_pred ceeeEEEEEcCCCcEEEEEecCCcCCCCCHHHHHHHHHH
Confidence 4987666 799998887553 245777777754
No 462
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=63.38 E-value=3.8 Score=32.53 Aligned_cols=41 Identities=7% Similarity=-0.024 Sum_probs=30.6
Q ss_pred hHHHhhcCCCCeEEEEeeecccC----------------------CcchhccCCcc--ceEEeee
Q psy1110 16 PLAKEIVKPKAITLGLIERLTEK----------------------ADPVCTREKAK--KKVRRQK 56 (366)
Q Consensus 16 ~la~e~~~~~~I~~~~Vdc~~~~----------------------~~~lc~~~~I~--Pti~~f~ 56 (366)
.+++++....++.+..|+++.+. ...++++++|. ||+.++.
T Consensus 52 ~l~~~~~~~~~~~vv~i~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~Pt~~lid 116 (144)
T 1o73_A 52 EFYEKHHVAKNFEVVLISWDENESDFHDYYGKMPWLALPFDQRSTVSELGKTFGVESIPTLITIN 116 (144)
T ss_dssp HHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHHTCCSSSEEEEEE
T ss_pred HHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCceEeeccchhHHHHHHHHcCCCCCCEEEEEE
Confidence 45666653457888888886531 24689999998 9999998
No 463
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=62.62 E-value=6.3 Score=32.91 Aligned_cols=34 Identities=12% Similarity=0.047 Sum_probs=25.8
Q ss_pred Ccc--ceEEee-ecCeeeEeecCCccHHHHHHHHhCc
Q psy1110 47 KAK--KKVRRQ-KNAEVKYVYENGNTKDKIIEFVRNP 80 (366)
Q Consensus 47 ~I~--Pti~~f-~~g~~~~~y~g~r~~~~i~~fi~~~ 80 (366)
+|. |++.++ ++|.....|.|..+.+.|.+++.+.
T Consensus 143 ~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~l 179 (183)
T 3lwa_A 143 PASVIPTTIVLDKQHRPAAVFLREVTSKDVLDVALPL 179 (183)
T ss_dssp CTTCCSEEEEECTTSCEEEEECSCCCHHHHHHHHHHH
T ss_pred CCCCCCeEEEECCCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 456 965555 5677777888999999999998754
No 464
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=62.39 E-value=0.54 Score=37.95 Aligned_cols=79 Identities=10% Similarity=0.106 Sum_probs=54.9
Q ss_pred CcCCcceeeeccccccccccC---CCCCCCCccceeEEEEecccc--------------------------ccccccccc
Q psy1110 237 SVGRGWELRQVGTGKRIKSIN---SGSFSPRQITGILAAVDVTRE--------------------------KSLGKRFDI 287 (366)
Q Consensus 237 ~~~~~~~~~~c~~c~~~~p~~---~~~~~~~~~~v~~a~vd~~~~--------------------------~~l~~~~~I 287 (366)
.+...|.+.||++|+...|.+ .+.|++. ++.+..++.+.. ..+.+.|+|
T Consensus 34 ~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~--~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~v 111 (143)
T 4fo5_A 34 YTLLNFWAAYDAESRARNVQLANEVNKFGPD--KIAMCSISMDEKESIFTETVKIDKLDLSTQFHEGLGKESELYKKYDL 111 (143)
T ss_dssp EEEEEEECTTCHHHHHHHHHHHHHHTTSCTT--TEEEEEEECCSCHHHHHHHHHHHTCCGGGEEECTTGGGSHHHHHTTG
T ss_pred EEEEEEEcCcCHHHHHHHHHHHHHHHHhCcC--CEEEEEEEccCCHHHHHHHHHHhCCCCceeeecccccchHHHHHcCC
Confidence 344556677899999999997 4455544 366666554421 246678999
Q ss_pred ccCCeEEEe-cCCceeeecCCCCCHHHHHHHHhC
Q psy1110 288 KGFPTLKYF-RAGSVAFDAGHLRDASRLVEFMRD 320 (366)
Q Consensus 288 ~~~Ptl~~f-k~G~~~~~~~g~~~~e~l~~fi~~ 320 (366)
+++|+++++ ++|+++.+..+ .++|.+++++
T Consensus 112 ~~~P~~~lid~~G~i~~~~~~---~~~l~~~l~~ 142 (143)
T 4fo5_A 112 RKGFKNFLINDEGVIIAANVT---PEKLTEILKA 142 (143)
T ss_dssp GGCCCEEEECTTSBEEEESCC---HHHHHHHHTC
T ss_pred CCCCcEEEECCCCEEEEccCC---HHHHHHHHHh
Confidence 999988877 59998877654 5667666654
No 465
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=62.32 E-value=6.6 Score=39.87 Aligned_cols=33 Identities=24% Similarity=0.458 Sum_probs=24.7
Q ss_pred hhhhhhhccCCeEEEEEECCCChhhhcccHHHHHH
Q psy1110 107 DNFDLVIQEESSVLVMFYAPWCGHCKKLKPEYEEA 141 (366)
Q Consensus 107 ~~~~~~i~~~k~vlV~F~a~wC~~Ck~~~p~~e~l 141 (366)
+.++++++..+ ++.|..+||++|++.+..+.+.
T Consensus 9 ~~v~~~i~~~~--v~vy~~~~Cp~C~~~k~~L~~~ 41 (598)
T 2x8g_A 9 QWLRKTVDSAA--VILFSKTTCPYCKKVKDVLAEA 41 (598)
T ss_dssp HHHHHHHHHCS--EEEEECTTCHHHHHHHHHHHHT
T ss_pred HHHHHHhccCC--EEEEECCCChhHHHHHHHHHHC
Confidence 45666775543 5668999999999888887754
No 466
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=62.12 E-value=4 Score=34.24 Aligned_cols=43 Identities=2% Similarity=-0.201 Sum_probs=33.8
Q ss_pred cchhccCCcc--ceEEeee-cCeeeEeecCCccHHHHHHHHhCcCC
Q psy1110 40 DPVCTREKAK--KKVRRQK-NAEVKYVYENGNTKDKIIEFVRNPQA 82 (366)
Q Consensus 40 ~~lc~~~~I~--Pti~~f~-~g~~~~~y~g~r~~~~i~~fi~~~~~ 82 (366)
..++..++|. |++.++. +|.....+.|..+.+.+.+++.....
T Consensus 122 ~~~~~~~~v~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~l~~~l~ 167 (176)
T 3kh7_A 122 GTLGLDLGVYGAPETYLIDKQGIIRHKIVGVVDQKVWREQLAPLYQ 167 (176)
T ss_dssp CHHHHHHTCCSSCEEEEECTTCBEEEEEESCCCHHHHHHHTHHHHH
T ss_pred chHHHHcCCCCCCeEEEECCCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 3789999999 9776664 57767788899899998888876543
No 467
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=61.76 E-value=1.2 Score=38.13 Aligned_cols=86 Identities=10% Similarity=-0.054 Sum_probs=56.9
Q ss_pred CCcCCcceeeeccccccccccCCC---CCCCCccceeEEEEeccc--------cc---ccc-------------------
Q psy1110 236 ESVGRGWELRQVGTGKRIKSINSG---SFSPRQITGILAAVDVTR--------EK---SLG------------------- 282 (366)
Q Consensus 236 ~~~~~~~~~~~c~~c~~~~p~~~~---~~~~~~~~v~~a~vd~~~--------~~---~l~------------------- 282 (366)
+.+-..|.+.||++|..-.|.+.+ .|++. ++.+..++++. .. .+.
T Consensus 47 k~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~--~~~vi~is~d~~~~~e~~~~~~~~~~~~~~~~~~~p~~~~~d~~~~ 124 (187)
T 3dwv_A 47 SPLLIYNVASKCGYTKGGYETATTLYNKYKSQ--GFTVLAFPSNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGE 124 (187)
T ss_dssp SCEEEEEECCBCSCCTTHHHHHHHHHHHHGGG--TCEEEEEEBCCCSSCSSSBTTHHHHSCCBCCCCSSCBBCCBCCSCC
T ss_pred CEEEEEEecCCCCCcHHHHHHHHHHHHHhhhC--CeEEEEEECcccCCCCCCCHHHHHHHHHhccCCCCceeeccccCCc
Confidence 345556667889999999998744 44433 36666654431 11 111
Q ss_pred --------------cccccccCC---eEEEe-cCCceeeecCCCCCHHHHHHHHhCCCC
Q psy1110 283 --------------KRFDIKGFP---TLKYF-RAGSVAFDAGHLRDASRLVEFMRDPTE 323 (366)
Q Consensus 283 --------------~~~~I~~~P---tl~~f-k~G~~~~~~~g~~~~e~l~~fi~~~~~ 323 (366)
..+++..+| +++++ ++|+++..+.|..+.+.|.+.|++.+.
T Consensus 125 ~~~~~~~~l~~~~~~~~~~~~iP~~~~~~liD~~G~i~~~~~g~~~~~~l~~~i~~lL~ 183 (187)
T 3dwv_A 125 NAHPLYEYMKKTKPGILATKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEEKLIPLLG 183 (187)
T ss_dssp -CCHHHHHHHHHSCCSBSSSSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHC-
T ss_pred chhHHHHHHHhhcCCccCCCccccceeEEEECCCCCEEEEECCCCCHHHHHHHHHHHHh
Confidence 222445667 76666 899999999999999999998887664
No 468
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=60.69 E-value=0.59 Score=39.93 Aligned_cols=31 Identities=13% Similarity=0.061 Sum_probs=24.4
Q ss_pred CCeEEEe-cCCceeeecCCCCCHHHHHHHHhC
Q psy1110 290 FPTLKYF-RAGSVAFDAGHLRDASRLVEFMRD 320 (366)
Q Consensus 290 ~Ptl~~f-k~G~~~~~~~g~~~~e~l~~fi~~ 320 (366)
+|+.+++ ++|+++.++.|..+.++|.+.|++
T Consensus 152 ~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ 183 (185)
T 2gs3_A 152 NFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPH 183 (185)
T ss_dssp SCCEEEECTTSCEEEEECTTSCGGGGGGGHHH
T ss_pred cceEEEECCCCCEEEeeCCCCCHHHHHHHHHH
Confidence 5776666 899999999998888887776654
No 469
>3gmf_A Protein-disulfide isomerase; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Novosphingobium aromaticivorans}
Probab=60.30 E-value=4.4 Score=35.61 Aligned_cols=40 Identities=15% Similarity=0.254 Sum_probs=31.2
Q ss_pred ccccc-cccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCC
Q psy1110 278 EKSLG-KRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPT 322 (366)
Q Consensus 278 ~~~l~-~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~ 322 (366)
+.... ..++|+|+||+++ +|+. +.|..+.+.|.+.|++.+
T Consensus 156 ~~~~a~~~~GV~GtPtfvv--ng~~---~~G~~~~e~l~~~i~~~~ 196 (205)
T 3gmf_A 156 ETDEAINQYNVSGTPSFMI--DGIL---LAGTHDWASLRPQILARL 196 (205)
T ss_dssp HHHHHHHHHCCCSSSEEEE--TTEE---CTTCCSHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCccCCEEEE--CCEE---EeCCCCHHHHHHHHHHHh
Confidence 34556 7899999999998 8873 578889998888876543
No 470
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=59.38 E-value=0.8 Score=37.59 Aligned_cols=81 Identities=14% Similarity=0.118 Sum_probs=56.2
Q ss_pred cCCcce-eeeccccccccccCCC---CCCCCccceeEEEEeccc-----------------------ccccccccccc--
Q psy1110 238 VGRGWE-LRQVGTGKRIKSINSG---SFSPRQITGILAAVDVTR-----------------------EKSLGKRFDIK-- 288 (366)
Q Consensus 238 ~~~~~~-~~~c~~c~~~~p~~~~---~~~~~~~~v~~a~vd~~~-----------------------~~~l~~~~~I~-- 288 (366)
+...|. +.||++|....|.+.+ .|.+. ++.+..++.+. +..+.+.|++.
T Consensus 39 vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~--~~~vv~is~d~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~~ 116 (160)
T 1xvw_A 39 VLLVFFPLAFTGICQGELDQLRDHLPEFEND--DSAALAISVGPPPTHKIWATQSGFTFPLLSDFWPHGAVSQAYGVFNE 116 (160)
T ss_dssp EEEEECSCTTSSHHHHHHHHHHHTGGGTSSS--SEEEEEEESCCHHHHHHHHHHHTCCSCEEECTTTTTHHHHHTTCEET
T ss_pred EEEEEECCCCCCchHHHHHHHHHHHHHHHHC--CcEEEEEeCCCHHHHHHHHHhcCCCceEEecCCcChHHHHHcCCccc
Confidence 334454 7889999999998744 44433 46666666532 56788899999
Q ss_pred --cCC--e-EEEecCCceeeecCCCC----CHHHHHHHHhC
Q psy1110 289 --GFP--T-LKYFRAGSVAFDAGHLR----DASRLVEFMRD 320 (366)
Q Consensus 289 --~~P--t-l~~fk~G~~~~~~~g~~----~~e~l~~fi~~ 320 (366)
++| + +++-++|+++..+.|.. ..++++..|++
T Consensus 117 ~~~~p~~~~~lid~~G~i~~~~~g~~~~~~~~~~l~~~l~~ 157 (160)
T 1xvw_A 117 QAGIANRGTFVVDRSGIIRFAEMKQPGEVRDQRLWTDALAA 157 (160)
T ss_dssp TTTEECSEEEEECTTSBEEEEEECCTTCCCCHHHHHHHHHH
T ss_pred cCCCeeeeEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHH
Confidence 999 4 45558999998887764 35666666654
No 471
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=59.24 E-value=0.61 Score=39.60 Aligned_cols=82 Identities=11% Similarity=-0.042 Sum_probs=53.6
Q ss_pred cCCcceeeeccccccccccCCC---CCCCCccceeEEEEeccc-------------------------------cccccc
Q psy1110 238 VGRGWELRQVGTGKRIKSINSG---SFSPRQITGILAAVDVTR-------------------------------EKSLGK 283 (366)
Q Consensus 238 ~~~~~~~~~c~~c~~~~p~~~~---~~~~~~~~v~~a~vd~~~-------------------------------~~~l~~ 283 (366)
+...|.+.||++|....|.+.+ .|++. ++.+..++++. +.....
T Consensus 50 vll~F~atwC~~C~~~~~~l~~l~~~~~~~--~v~vv~vs~d~~~~~e~~~~~~~~~~~~~~~~~~p~~~~~d~~~~~~~ 127 (183)
T 2obi_A 50 CIVTNVASQCGKTEVNYTQLVDLHARYAEC--GLRILAFPCNQFGKQEPGSNEEIKEFAAGYNVKFDMFSKICVNGDDAH 127 (183)
T ss_dssp EEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TEEEEEEECCCSTTCCCSCHHHHHHHHHTTTCCSEEBCCCCCSSTTSC
T ss_pred EEEEEeCCCCCCcHHHHHHHHHHHHHHhcC--CeEEEEEECCCCCCCCCCCHHHHHHHHHHcCCCceEEeeeccCCcchh
Confidence 4445667789999999998744 34332 36677665431 001010
Q ss_pred -cc----------c-----cccCCeEEEe-cCCceeeecCCCCCHHHHHHHHhCC
Q psy1110 284 -RF----------D-----IKGFPTLKYF-RAGSVAFDAGHLRDASRLVEFMRDP 321 (366)
Q Consensus 284 -~~----------~-----I~~~Ptl~~f-k~G~~~~~~~g~~~~e~l~~fi~~~ 321 (366)
.| + |+.+|+++++ ++|+++.++.|..+.++|.++|++.
T Consensus 128 ~~~~~l~~~~~~~g~~~~~i~~~P~~~lid~~G~i~~~~~g~~~~~~l~~~i~~l 182 (183)
T 2obi_A 128 PLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKDLPHY 182 (183)
T ss_dssp HHHHHHHTSTTTCCSSSSSCCSTTCEEEECTTSCEEEEECTTSCTHHHHTTSGGG
T ss_pred HHHHHhhccCCCCCcccccccccceEEEECCCCCEEEEeCCCCCHHHHHHHHHHh
Confidence 12 3 3446987766 8999999999998888888877653
No 472
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=58.50 E-value=8.5 Score=30.53 Aligned_cols=46 Identities=13% Similarity=0.058 Sum_probs=32.9
Q ss_pred chHHHhhcCCCCeEEEEeeecccC----------------------CcchhccCCcc--ceEEeee--cCee
Q psy1110 15 SPLAKEIVKPKAITLGLIERLTEK----------------------ADPVCTREKAK--KKVRRQK--NAEV 60 (366)
Q Consensus 15 ~~la~e~~~~~~I~~~~Vdc~~~~----------------------~~~lc~~~~I~--Pti~~f~--~g~~ 60 (366)
..+++++....++.+..|+++.+. ...++++++|. ||+.++. +|..
T Consensus 51 ~~l~~~~~~~~~~~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~P~~~lid~~~G~i 122 (144)
T 1i5g_A 51 IDFYKAHAEKKNFEVMLISWDESAEDFKDYYAKMPWLALPFEDRKGMEFLTTGFDVKSIPTLVGVEADSGNI 122 (144)
T ss_dssp HHHHHHHTTTTTEEEEEEECCSSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTCCSSSEEEEEETTTCCE
T ss_pred HHHHHHhccCCCEEEEEEeCCCCHHHHHHHHHhCCccccccCchHHHHHHHHHcCCCCCCEEEEEECCCCcE
Confidence 345666663357999999886521 24799999998 9999997 4543
No 473
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=58.21 E-value=0.56 Score=40.26 Aligned_cols=85 Identities=11% Similarity=-0.087 Sum_probs=57.4
Q ss_pred CCcCCcceeeeccccccccccCCC---CCCCCccceeEEEEeccc--------c---cccc-------------------
Q psy1110 236 ESVGRGWELRQVGTGKRIKSINSG---SFSPRQITGILAAVDVTR--------E---KSLG------------------- 282 (366)
Q Consensus 236 ~~~~~~~~~~~c~~c~~~~p~~~~---~~~~~~~~v~~a~vd~~~--------~---~~l~------------------- 282 (366)
+.+...|.+.||++|....|.+.+ .|.+. ++.++.++++. . ..++
T Consensus 49 k~vll~F~atwC~~C~~~~~~l~~l~~~~~~~--~v~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~D~~~~ 126 (190)
T 2vup_A 49 SPLLIYNVASKCGYTKGGYETATTLYNKYKSQ--GFTVLAFPCNQFGGQEPGNEEEIKEFVCTKFKAEFPIMAKINVNGE 126 (190)
T ss_dssp SCEEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TCEEEEEECCCSTTCCCSCHHHHHHHHHHHHCCCSCBBCCCBSSST
T ss_pred CEEEEEEecCCCCccHHHHHHHHHHHHHHhcC--CeEEEEEEcCccCCCCCCCHHHHHHHHHHhcCCCeEEEeecccCcc
Confidence 334455667889999999888744 34332 36676665541 0 0111
Q ss_pred -----------cccccccCC------eE-EEecCCceeeecCCCCCHHHHHHHHhCCC
Q psy1110 283 -----------KRFDIKGFP------TL-KYFRAGSVAFDAGHLRDASRLVEFMRDPT 322 (366)
Q Consensus 283 -----------~~~~I~~~P------tl-~~fk~G~~~~~~~g~~~~e~l~~fi~~~~ 322 (366)
..+++.++| ++ ++.++|+++.++.|..+.+.|.+.|++.+
T Consensus 127 ~~~~~~~~l~~~~~~v~~~P~i~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll 184 (190)
T 2vup_A 127 NAHPLYEYMKKTKPGILKTKAIKWNFTSFLIDRDGVPVERFSPGASVKDIEKKLIPLL 184 (190)
T ss_dssp TBCHHHHHHHHHSCCGGGCCSCCSTTCEEEECTTSCEEEEECTTCCHHHHHHHHHHHH
T ss_pred cccHHHHHHHhhcCCcCCCccccccceEEEECCCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 124788999 54 44589999999999989998888887654
No 474
>3ktb_A Arsenical resistance operon trans-acting represso; alpha-beta-alpha sandwich, helix-turn-helix, structural GENO PSI-2; 2.10A {Bacteroides vulgatus}
Probab=57.90 E-value=13 Score=29.44 Aligned_cols=50 Identities=10% Similarity=0.140 Sum_probs=39.0
Q ss_pred ceeEEEEeccccc----------ccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHh
Q psy1110 267 TGILAAVDVTREK----------SLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMR 319 (366)
Q Consensus 267 ~v~~a~vd~~~~~----------~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~ 319 (366)
++.+.+++.+++. ++..++++...|.+++ ||+ +.......+.++|.+|+.
T Consensus 43 Gi~V~RyNL~~~P~~F~~N~~V~~~L~~~G~~~LP~~~V--DGe-vv~~G~yPt~eEl~~~lg 102 (106)
T 3ktb_A 43 GIIVTRHNLRDEPQVYVSNKTVNDFLQKHGADALPITLV--DGE-IAVSQTYPTTKQMSEWTG 102 (106)
T ss_dssp TCCCEEEETTTCTTHHHHSHHHHHHHHTTCGGGCSEEEE--TTE-EEECSSCCCHHHHHHHHC
T ss_pred CCEEEEEccccChHHHhcCHHHHHHHHHcCcccCCEEEE--CCE-EEEeccCCCHHHHHHHhC
Confidence 3778888877665 5667899999999999 999 444555678899999984
No 475
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=56.07 E-value=18 Score=28.97 Aligned_cols=41 Identities=10% Similarity=0.047 Sum_probs=31.1
Q ss_pred chhccCCcc--c---------------eEEee-ecCeeeEeecCCccHHHHHHHHhCcC
Q psy1110 41 PVCTREKAK--K---------------KVRRQ-KNAEVKYVYENGNTKDKIIEFVRNPQ 81 (366)
Q Consensus 41 ~lc~~~~I~--P---------------ti~~f-~~g~~~~~y~g~r~~~~i~~fi~~~~ 81 (366)
.+++.+||. | ++.++ ++|.....|.|..+.+.|.+.+.+..
T Consensus 102 ~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 160 (164)
T 2ggt_A 102 QVARAYRVYYSPGPKDEDEDYIVDHTIIMYLIGPDGEFLDYFGQNKRKGEIAASIATHM 160 (164)
T ss_dssp HHHHTTTCCEEEEEECTTSCEEEEECCEEEEECTTSCEEEEEETTCCHHHHHHHHHHHH
T ss_pred HHHHhcCeEEEecCCCCCCCeeEeccceEEEECCCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence 488899998 8 55555 46777778888888899988886543
No 476
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=55.66 E-value=9.6 Score=30.86 Aligned_cols=36 Identities=17% Similarity=0.443 Sum_probs=26.7
Q ss_pred EEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCCcc
Q psy1110 120 LVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRHRP 161 (366)
Q Consensus 120 lV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~~~ 161 (366)
++.|+.++|+.|++....+++. .+.+-.+|+.+++.
T Consensus 3 i~lY~~~~C~~C~ka~~~L~~~------gi~y~~~di~~~~~ 38 (132)
T 1z3e_A 3 VTLYTSPSCTSCRKARAWLEEH------EIPFVERNIFSEPL 38 (132)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT------TCCEEEEETTTSCC
T ss_pred EEEEeCCCChHHHHHHHHHHHc------CCceEEEEccCCCc
Confidence 5678899999999988877753 35666777766543
No 477
>1r4w_A Glutathione S-transferase, mitochondrial; glutathione transferase, kappa GST, RGSTK1-1; HET: GSH; 2.50A {Rattus norvegicus} SCOP: c.47.1.13
Probab=55.16 E-value=11 Score=32.98 Aligned_cols=45 Identities=11% Similarity=0.075 Sum_probs=32.3
Q ss_pred ccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCCC
Q psy1110 278 EKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPTE 323 (366)
Q Consensus 278 ~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~~ 323 (366)
+......++|+|+|||++=.+|+ -..+.|....+.+.++|.+...
T Consensus 171 ~~~~a~~~gv~G~Ptfvv~~~g~-~~~~~G~~~~~~l~~~l~~~~~ 215 (226)
T 1r4w_A 171 TTGAACKYGAFGLPTTVAHVDGK-TYMLFGSDRMELLAYLLGEKWM 215 (226)
T ss_dssp HHHHHHHTTCCSSCEEEEEETTE-EEEEESTTCHHHHHHHHTCCCC
T ss_pred HHHHHHHCCCCCCCEEEEeCCCC-cCceeCCCcHHHHHHHhcCccc
Confidence 34556788999999998844443 2255688888999999986543
No 478
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=54.52 E-value=9.8 Score=31.45 Aligned_cols=44 Identities=7% Similarity=0.033 Sum_probs=32.9
Q ss_pred chHHHhhcCCCCeEEEEeeecccCC----------------------cchhccCCcc--ceEEeeecC
Q psy1110 15 SPLAKEIVKPKAITLGLIERLTEKA----------------------DPVCTREKAK--KKVRRQKNA 58 (366)
Q Consensus 15 ~~la~e~~~~~~I~~~~Vdc~~~~~----------------------~~lc~~~~I~--Pti~~f~~g 58 (366)
..+++++....++.|..|+++.+.. ..++++++|. ||+.++.+.
T Consensus 71 ~~l~~~~~~~~~v~vv~v~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~Pt~~lid~~ 138 (165)
T 3s9f_A 71 VEFYEKHHDSKNFEIILASWDEEEDDFNAYYAKMPWLSIPFANRNIVEALTKKYSVESIPTLIGLNAD 138 (165)
T ss_dssp HHHHHHHTTTTTEEEEEEECCCSHHHHHHHHTTCSSEECCTTCHHHHHHHHHHTTCCSSSEEEEEETT
T ss_pred HHHHHHhccCCCeEEEEEecCCCHHHHHHHHHhCCCcccccCchhHHHHHHHHcCCCCCCEEEEEeCC
Confidence 3566777644578888888865521 4799999999 999999853
No 479
>3kgk_A Arsenical resistance operon trans-acting represso; alpha+beta, chaperone, DNA-binding, RE transcription, transcription regulation; 1.40A {Escherichia coli} PDB: 3mwh_A
Probab=53.89 E-value=24 Score=28.18 Aligned_cols=53 Identities=15% Similarity=0.265 Sum_probs=41.2
Q ss_pred ceeEEEEeccccc----------ccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCC
Q psy1110 267 TGILAAVDVTREK----------SLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPT 322 (366)
Q Consensus 267 ~v~~a~vd~~~~~----------~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~ 322 (366)
++.+.+++.+++. ++..++++...|.+++ ||++ ......-+.++|.+|+.=..
T Consensus 40 Gi~V~RyNL~~~P~aF~~N~~V~~~L~~~G~~~LP~~~V--DGev-v~~G~yPt~eEl~~~lgi~~ 102 (110)
T 3kgk_A 40 GVQIERFNLAQQPMSFVQNEKVKAFIEASGAEGLPLLLL--DGET-VMAGRYPKRAELARWFGIPL 102 (110)
T ss_dssp TCCEEEEETTTCTTHHHHSHHHHHHHHHHCGGGCCEEEE--TTEE-EEESSCCCHHHHHHHHTCCC
T ss_pred CCeEEEEccccChHHHhcCHHHHHHHHHcCcccCCEEEE--CCEE-EEeccCCCHHHHHHHhCCCc
Confidence 3788888887766 5667789999999999 9994 44555678899999997543
No 480
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=53.35 E-value=5.9 Score=35.34 Aligned_cols=45 Identities=13% Similarity=0.171 Sum_probs=30.2
Q ss_pred ccccccc-cccccCCeEEEec-CCcee-----eecCCCCCHHHHHHHHhCCC
Q psy1110 278 EKSLGKR-FDIKGFPTLKYFR-AGSVA-----FDAGHLRDASRLVEFMRDPT 322 (366)
Q Consensus 278 ~~~l~~~-~~I~~~Ptl~~fk-~G~~~-----~~~~g~~~~e~l~~fi~~~~ 322 (366)
+...... ++|+|+|||+++. +|+.+ ....|..+.+.|.+.|++.+
T Consensus 159 ~~~~a~~~~GV~GtPtfvv~~~nG~~~~Ga~~~~~~G~~~~e~l~~~I~~~l 210 (226)
T 3f4s_A 159 DKSLAINKLGITAVPIFFIKLNDDKSYIEHNKVKHGGYKELKYFTNVIDKLY 210 (226)
T ss_dssp HHHHHHHHHCCCSSCEEEEEECCTTCCCCGGGGEEESCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCcCCEEEEEcCCCEEeeCCCCcccccccCHHHHHHHHHHHH
Confidence 3455677 9999999999864 77743 12234445888887776543
No 481
>2imf_A HCCA isomerase, 2-hydroxychromene-2-carboxylate isomerase; glutathione, KGST, kappa GST, transferase; HET: GSH TOM CXS; 1.30A {Pseudomonas putida} PDB: 2ime_A* 2imd_A*
Probab=52.29 E-value=5.3 Score=34.44 Aligned_cols=38 Identities=13% Similarity=-0.040 Sum_probs=29.4
Q ss_pred ccccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhC
Q psy1110 278 EKSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRD 320 (366)
Q Consensus 278 ~~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~ 320 (366)
+......++|+|+|||++ +|+ .+.|....+.|.+.|.+
T Consensus 156 ~~~~a~~~Gv~G~Ptfvi--~g~---~~~G~~~~~~l~~~l~~ 193 (203)
T 2imf_A 156 QTHAAIERKVFGVPTMFL--GDE---MWWGNDRLFMLESAMGR 193 (203)
T ss_dssp HHHHHHHTTCCSSSEEEE--TTE---EEESGGGHHHHHHHHHH
T ss_pred HHHHHHHCCCCcCCEEEE--CCE---EEECCCCHHHHHHHHhc
Confidence 345567889999999998 786 45687788888887764
No 482
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=51.23 E-value=5.8 Score=32.41 Aligned_cols=30 Identities=10% Similarity=0.232 Sum_probs=24.4
Q ss_pred ceEEeeecCeeeEeecCCc--cHHHHHHHHhC
Q psy1110 50 KKVRRQKNAEVKYVYENGN--TKDKIIEFVRN 79 (366)
Q Consensus 50 Pti~~f~~g~~~~~y~g~r--~~~~i~~fi~~ 79 (366)
|++.++.+|.....|.|.. +.+.|.+.+++
T Consensus 139 P~~~lid~G~i~~~~~g~~~~~~~~l~~~l~~ 170 (172)
T 2k6v_A 139 ATTFVVKEGRLVLLYSPDKAEATDRVVADLQA 170 (172)
T ss_dssp CCEEEEETTEEEEEECHHHHTCHHHHHHHHHH
T ss_pred CEEEEEECCEEEEEECCCCCCCHHHHHHHHHH
Confidence 9998888676677888877 88999988864
No 483
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=49.47 E-value=12 Score=31.68 Aligned_cols=42 Identities=10% Similarity=-0.005 Sum_probs=31.3
Q ss_pred CCeEEEEeeecccCCcchhccCC---cc--ceEEeeecC-eeeEeecCCcc
Q psy1110 25 KAITLGLIERLTEKADPVCTREK---AK--KKVRRQKNA-EVKYVYENGNT 69 (366)
Q Consensus 25 ~~I~~~~Vdc~~~~~~~lc~~~~---I~--Pti~~f~~g-~~~~~y~g~r~ 69 (366)
++|.|..||.+++. ++..+++ |+ ||+.+|++| .....+ |.+.
T Consensus 84 ~~v~~~~v~~d~~~--~~~~~~~~~~v~~iPt~i~~~~~G~~~~~~-g~~p 131 (167)
T 1z6n_A 84 PNIELAIISKGRAE--DDLRQRLALERIAIPLVLVLDEEFNLLGRF-VERP 131 (167)
T ss_dssp TTEEEEEECHHHHH--HHTTTTTTCSSCCSSEEEEECTTCCEEEEE-ESSC
T ss_pred CCcEEEEEECCCCH--HHHHHHHHcCCCCcCeEEEECCCCCEEEEE-cCCC
Confidence 46999999997654 8888886 88 999999986 444444 4443
No 484
>3fz5_A Possible 2-hydroxychromene-2-carboxylate isomeras; 2-hydroxychromene-2-carboxylate ISO structural genomics, PSI-2; HET: MSE GSH PGE; 2.40A {Rhodobacter sphaeroides 2}
Probab=49.10 E-value=6.7 Score=33.96 Aligned_cols=37 Identities=14% Similarity=0.041 Sum_probs=29.4
Q ss_pred cccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhC
Q psy1110 279 KSLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRD 320 (366)
Q Consensus 279 ~~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~ 320 (366)
.......+|+|+||+++ +|+ .+.|....+.|.++|..
T Consensus 163 ~~~a~~~Gv~GvPtfvv--~g~---~~~G~~~~~~l~~~l~~ 199 (202)
T 3fz5_A 163 GEDAVARGIFGSPFFLV--DDE---PFWGWDRMEMMAEWIRT 199 (202)
T ss_dssp HHHHHHTTCCSSSEEEE--TTE---EEESGGGHHHHHHHHHT
T ss_pred HHHHHHCCCCcCCEEEE--CCE---EEecCCCHHHHHHHHhc
Confidence 34556789999999998 786 45688788888888865
No 485
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=48.49 E-value=27 Score=28.17 Aligned_cols=41 Identities=10% Similarity=0.096 Sum_probs=31.5
Q ss_pred chhccCCcc--c---------------eEEee-ecCeeeEeecCCccHHHHHHHHhCcC
Q psy1110 41 PVCTREKAK--K---------------KVRRQ-KNAEVKYVYENGNTKDKIIEFVRNPQ 81 (366)
Q Consensus 41 ~lc~~~~I~--P---------------ti~~f-~~g~~~~~y~g~r~~~~i~~fi~~~~ 81 (366)
.+++.+||. | ++.++ ++|.....|.|..+.+.|.+.+.+..
T Consensus 105 ~~~~~~~v~~~p~~~~~~~~~~~~~~~~~~lid~~G~i~~~~~g~~~~~~l~~~l~~ll 163 (171)
T 2rli_A 105 QASHSYRVYYNAGPKDEDQDYIVDHSIAIYLLNPDGLFTDYYGRSRSAEQISDSVRRHM 163 (171)
T ss_dssp HHHHHSCCCCEECCCCSSCCCCEECCCEEEEECTTSCEEEEEESSCCHHHHHHHHHHHH
T ss_pred HHHHHhCeEEEecCCCCCCCeEEeccceEEEECCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 578889998 7 65555 56777778889889999998887644
No 486
>2g2q_A Glutaredoxin-2; thioredoxin-fold, oxidoreductase, poxvirus; 2.50A {Vaccinia virus}
Probab=47.56 E-value=4.8 Score=32.62 Aligned_cols=29 Identities=28% Similarity=0.667 Sum_probs=23.4
Q ss_pred CeEEEEEECCCChhhhcccHHHHHHHHHH
Q psy1110 117 SSVLVMFYAPWCGHCKKLKPEYEEAAATM 145 (366)
Q Consensus 117 k~vlV~F~a~wC~~Ck~~~p~~e~la~~~ 145 (366)
|.++|.|..|-|+-|......++++..+|
T Consensus 2 K~tLILfGKP~C~vCe~~s~~l~~ledeY 30 (124)
T 2g2q_A 2 KNVLIIFGKPYCSICENVSDAVEELKSEY 30 (124)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHTTTTTE
T ss_pred CceEEEeCCCccHHHHHHHHHHHHhhccc
Confidence 57899999999999998887775555444
No 487
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=47.52 E-value=2.3 Score=35.46 Aligned_cols=78 Identities=9% Similarity=0.064 Sum_probs=48.7
Q ss_pred ceeeeccccccccccCCCCCCCCccceeEEEEec----------------------c-cccccccccccc-------c--
Q psy1110 242 WELRQVGTGKRIKSINSGSFSPRQITGILAAVDV----------------------T-REKSLGKRFDIK-------G-- 289 (366)
Q Consensus 242 ~~~~~c~~c~~~~p~~~~~~~~~~~~v~~a~vd~----------------------~-~~~~l~~~~~I~-------~-- 289 (366)
|.+.||++|..-.|.+.+.+... .++.+.-+.. + ....+ +.|++. +
T Consensus 55 ~~~~~C~~C~~~~~~l~~~~~~~-~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~-~~~gv~~~~~~~~g~~ 132 (171)
T 2yzh_A 55 VPSLDTPVCETETKKFNEIMAGM-EGVDVTVVSMDLPFAQKRFCESFNIQNVTVASDFRYRDM-EKYGVLIGEGALKGIL 132 (171)
T ss_dssp CSCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSCHHHHHHHHHHTTCCSSEEEECTTTCGG-GGGTCBBCSSTTTTSB
T ss_pred ECCCCCCchHHHHHHHHHHHHHc-CCceEEEEeCCCHHHHHHHHHHcCCCCeEEeecCccCcH-HHhCCEecccccCCce
Confidence 34678999999988864433322 2344444331 2 23445 677775 2
Q ss_pred CCeEEEe-cCCceeeecCC-----CCCHHHHHHHHhCC
Q psy1110 290 FPTLKYF-RAGSVAFDAGH-----LRDASRLVEFMRDP 321 (366)
Q Consensus 290 ~Ptl~~f-k~G~~~~~~~g-----~~~~e~l~~fi~~~ 321 (366)
.|+.+++ ++|+++..+.| ..+.+++++.|++.
T Consensus 133 ~p~~~liD~~G~i~~~~~~~~~~~~~~~~~ll~~l~~l 170 (171)
T 2yzh_A 133 ARAVFIIDKEGKVAYVQLVPEITEEPNYDEVVNKVKEL 170 (171)
T ss_dssp CCEEEEECTTSBEEEEEECSBTTSCCCCHHHHHHHHHC
T ss_pred eeEEEEEcCCCeEEEEEeCCCcCCCCCHHHHHHHHHhh
Confidence 5887777 68998877753 34567888877653
No 488
>3gl5_A Putative DSBA oxidoreductase SCO1869; probable DSBA oxidoreductase structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Streptomyces coelicolor A3}
Probab=47.34 E-value=10 Score=33.88 Aligned_cols=40 Identities=8% Similarity=0.097 Sum_probs=30.0
Q ss_pred ccccccccccCCeEEEecCCceeeecCCCCCHHHHHHHHhCCCC
Q psy1110 280 SLGKRFDIKGFPTLKYFRAGSVAFDAGHLRDASRLVEFMRDPTE 323 (366)
Q Consensus 280 ~l~~~~~I~~~Ptl~~fk~G~~~~~~~g~~~~e~l~~fi~~~~~ 323 (366)
.....++|+|+|||++ +|+. ...|..+.+.|.+.|++...
T Consensus 174 ~~a~~~Gv~GvPtfvv--~g~~--~v~Ga~~~e~~~~~i~~~~~ 213 (239)
T 3gl5_A 174 REAAQLGATGVPFFVL--DRAY--GVSGAQPAEVFTQALTQAWG 213 (239)
T ss_dssp HHHHHTTCCSSSEEEE--TTTE--EEESSCCHHHHHHHHHHHHH
T ss_pred HHHHHCCCCeeCeEEE--CCcE--eecCCCCHHHHHHHHHHHHh
Confidence 4456789999999998 7763 34688888888877765543
No 489
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=47.01 E-value=9.7 Score=29.98 Aligned_cols=34 Identities=21% Similarity=0.193 Sum_probs=24.4
Q ss_pred EEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCC
Q psy1110 120 LVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRH 159 (366)
Q Consensus 120 lV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~ 159 (366)
++.|+.++|+.|++....+++ ..+.+-.+|+.++
T Consensus 2 i~iY~~~~C~~C~kak~~L~~------~gi~~~~~di~~~ 35 (114)
T 1rw1_A 2 YVLYGIKACDTMKKARTWLDE------HKVAYDFHDYKAV 35 (114)
T ss_dssp EEEEECSSCHHHHHHHHHHHH------TTCCEEEEEHHHH
T ss_pred EEEEECCCChHHHHHHHHHHH------CCCceEEEeecCC
Confidence 456789999999988777765 2356666776544
No 490
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=46.00 E-value=19 Score=25.63 Aligned_cols=47 Identities=9% Similarity=0.085 Sum_probs=27.8
Q ss_pred CCCCchHHHhhcCCCCeEEEEeeeccc-CCcchhccCCcc--ceEEeeecCe
Q psy1110 11 KEDTSPLAKEIVKPKAITLGLIERLTE-KADPVCTREKAK--KKVRRQKNAE 59 (366)
Q Consensus 11 ~~~~~~la~e~~~~~~I~~~~Vdc~~~-~~~~lc~~~~I~--Pti~~f~~g~ 59 (366)
+..+.+..+++.+..++.+--++.... ...+++.++||+ ||+.+ +|.
T Consensus 15 C~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~gv~~vPt~~i--~g~ 64 (80)
T 2k8s_A 15 CVSAEQAVANAIDPSKYTVEIVHLGTDKARIAEAEKAGVKSVPALVI--DGA 64 (80)
T ss_dssp HHHHHHHHHHHSCTTTEEEEEEETTTCSSTHHHHHHHTCCEEEEEEE--TTE
T ss_pred hHHHHHHHHHHHHhcCCeEEEEEecCChhhHHHHHHcCCCcCCEEEE--CCE
Confidence 344455444455444455444444322 345789999998 99876 565
No 491
>2in3_A Hypothetical protein; DSBA family, FRNE-like subfamily, disulfide isomerase, struc genomics, PSI-2, protein structure initiative; 1.85A {Nitrosomonas europaea}
Probab=45.28 E-value=18 Score=30.91 Aligned_cols=40 Identities=0% Similarity=-0.070 Sum_probs=32.8
Q ss_pred chhccCCcc--ceEEeeecCeeeEeecCCccHHHHHHHHhCc
Q psy1110 41 PVCTREKAK--KKVRRQKNAEVKYVYENGNTKDKIIEFVRNP 80 (366)
Q Consensus 41 ~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~i~~fi~~~ 80 (366)
.++.+.||. ||+.++.+|.....+.|..+.+.|.+++...
T Consensus 167 ~~a~~~gv~g~Pt~~i~~~G~~~~~~~G~~~~~~l~~~l~~~ 208 (216)
T 2in3_A 167 QRVAQWGISGFPALVVESGTDRYLITTGYRPIEALRQLLDTW 208 (216)
T ss_dssp HHHHHTTCCSSSEEEEEETTEEEEEESSCCCHHHHHHHHHHH
T ss_pred HHHHHcCCcccceEEEEECCEEEEeccCCCCHHHHHHHHHHH
Confidence 678889999 9999888887655778988888888888653
No 492
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=44.17 E-value=11 Score=29.87 Aligned_cols=34 Identities=15% Similarity=0.138 Sum_probs=24.3
Q ss_pred EEEEECCCChhhhcccHHHHHHHHHHhccccEEEeeccCC
Q psy1110 120 LVMFYAPWCGHCKKLKPEYEEAAATMKQQRAYYGMGMLRH 159 (366)
Q Consensus 120 lV~F~a~wC~~Ck~~~p~~e~la~~~~~~v~~~~v~~~~~ 159 (366)
++.|+.++|+.|++....+++. .+.+-.+++.++
T Consensus 7 i~iY~~~~C~~C~ka~~~L~~~------gi~y~~~di~~~ 40 (120)
T 2kok_A 7 VTIYGIKNCDTMKKARIWLEDH------GIDYTFHDYKKE 40 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH------TCCEEEEEHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHc------CCcEEEEeeeCC
Confidence 5567899999999988877763 345555666543
No 493
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=43.89 E-value=1.9 Score=35.47 Aligned_cols=84 Identities=10% Similarity=-0.019 Sum_probs=56.2
Q ss_pred cCCcceeeeccccccccccCCC---CCCCCccceeEEEEeccc--------c---ccccc-c------------------
Q psy1110 238 VGRGWELRQVGTGKRIKSINSG---SFSPRQITGILAAVDVTR--------E---KSLGK-R------------------ 284 (366)
Q Consensus 238 ~~~~~~~~~c~~c~~~~p~~~~---~~~~~~~~v~~a~vd~~~--------~---~~l~~-~------------------ 284 (366)
+...|.+.||++|....|.+.+ .|.+. ++.+..++++. . ..+.+ +
T Consensus 35 vll~f~a~~C~~C~~~~~~l~~l~~~~~~~--~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 112 (170)
T 2p5q_A 35 LLIVNVASKCGMTNSNYAEMNQLYEKYKDQ--GLEILAFPCNQFGEEEPGTNDQITDFVCTRFKSEFPIFDKIDVNGENA 112 (170)
T ss_dssp EEEEEECSSSTTHHHHHHHHHHHHHHHGGG--TEEEEEEECCTTTTCCCSCHHHHHHHHHHHTCCCSCBBCCCBSSSTTB
T ss_pred EEEEEEeccCCccHHHHHHHHHHHHHhccC--CEEEEEEECCCCCCCCCCCHHHHHHHHHHhcCCCceeEeeeccCCCch
Confidence 4445667789999999998744 34332 37777776531 1 11111 1
Q ss_pred -----------ccc--ccCC---eEEEe-cCCceeeecCCCCCHHHHHHHHhCCCC
Q psy1110 285 -----------FDI--KGFP---TLKYF-RAGSVAFDAGHLRDASRLVEFMRDPTE 323 (366)
Q Consensus 285 -----------~~I--~~~P---tl~~f-k~G~~~~~~~g~~~~e~l~~fi~~~~~ 323 (366)
+++ .++| +++++ ++|+++.++.|..+.+.|.++|++.+.
T Consensus 113 ~~~~~~l~~~~~~~~~~~~p~~~~~~lid~~G~i~~~~~g~~~~~~l~~~i~~ll~ 168 (170)
T 2p5q_A 113 SPLYRFLKLGKWGIFGDDIQWNFAKFLVNKDGQVVDRYYPTTSPLSLERDIKQLLE 168 (170)
T ss_dssp CHHHHHHHTHHHHTTCSCCCSTTCEEEECTTSCEEEEECTTSCGGGGHHHHHHHTT
T ss_pred HHHHHHHHhcCCCccCCcccccccEEEECCCCCEEEeeCCCCCHHHHHHHHHHHhh
Confidence 145 6789 65555 899999999999888888888876553
No 494
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=43.43 E-value=2.4 Score=35.25 Aligned_cols=77 Identities=10% Similarity=0.151 Sum_probs=51.3
Q ss_pred ceeeeccccccccccCCCCCCCCccceeEEEEec----------------------cc-cccccccccccc------CCe
Q psy1110 242 WELRQVGTGKRIKSINSGSFSPRQITGILAAVDV----------------------TR-EKSLGKRFDIKG------FPT 292 (366)
Q Consensus 242 ~~~~~c~~c~~~~p~~~~~~~~~~~~v~~a~vd~----------------------~~-~~~l~~~~~I~~------~Pt 292 (366)
|...||++|..-.|.+.+.+.. .++.+.-+.. +. ...+.+.|++.. .|+
T Consensus 54 ~~~~~c~~C~~~~~~l~~~~~~--~~~~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv~~~~~g~~~p~ 131 (166)
T 3p7x_A 54 VPSIDTGVCDQQTRKFNSDASK--EEGIVLTISADLPFAQKRWCASAGLDNVITLSDHRDLSFGENYGVVMEELRLLARA 131 (166)
T ss_dssp CSCTTSHHHHHHHHHHHHHSCT--TTSEEEEEESSCHHHHHHHHHHHTCSSCEEEECTTTCHHHHHHTCEETTTTEECCE
T ss_pred ECCCCCCccHHHHHHHHHHhhc--CCCEEEEEECCCHHHHHHHHHHcCCCceEEccCCchhHHHHHhCCccccCCceeeE
Confidence 4467899999988887555544 3344444431 12 345566677775 898
Q ss_pred EEEe-cCCceeeec-----CCCCCHHHHHHHHhC
Q psy1110 293 LKYF-RAGSVAFDA-----GHLRDASRLVEFMRD 320 (366)
Q Consensus 293 l~~f-k~G~~~~~~-----~g~~~~e~l~~fi~~ 320 (366)
++++ ++|+++..+ .+..+.+++++.|++
T Consensus 132 ~~liD~~G~i~~~~~~~~~~~~~~~~~il~~l~~ 165 (166)
T 3p7x_A 132 VFVLDADNKVVYKEIVSEGTDFPDFDAALAAYKN 165 (166)
T ss_dssp EEEECTTCBEEEEEECSBTTSCCCHHHHHHHHHT
T ss_pred EEEECCCCeEEEEEEcCCcccCCCHHHHHHHHhc
Confidence 8877 799988763 334567888888765
No 495
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=42.28 E-value=2.7 Score=34.74 Aligned_cols=77 Identities=5% Similarity=0.053 Sum_probs=47.6
Q ss_pred eeeeccccccccccCCCCCCCCccceeEEEEec----------------------c-cccccccccccc----cC--CeE
Q psy1110 243 ELRQVGTGKRIKSINSGSFSPRQITGILAAVDV----------------------T-REKSLGKRFDIK----GF--PTL 293 (366)
Q Consensus 243 ~~~~c~~c~~~~p~~~~~~~~~~~~v~~a~vd~----------------------~-~~~~l~~~~~I~----~~--Ptl 293 (366)
...||++|..-.|.+.+.++.. .++.+.-+.. + ....+.+.|++. ++ |++
T Consensus 51 ~~~~c~~C~~~~~~l~~~~~~~-~~v~vv~is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv~~~~~g~~~p~~ 129 (163)
T 1psq_A 51 PSIDTGICSTQTRRFNEELAGL-DNTVVLTVSMDLPFAQKRWCGAEGLDNAIMLSDYFDHSFGRDYALLINEWHLLARAV 129 (163)
T ss_dssp SCTTSHHHHHHHHHHHHHTTTC-TTEEEEEEESSCHHHHHHHHHHHTCTTSEEEECTTTCHHHHHHTCBCTTTCSBCCEE
T ss_pred CCCCCCccHHHHHHHHHHHHHc-CCcEEEEEECCCHHHHHHHHHhcCCCCcEEecCCchhHHHHHhCCccccCCceEEEE
Confidence 3578999999888864333222 3344444432 1 233455667776 44 888
Q ss_pred EEe-cCCceeeecCCC-----CCHHHHHHHHhC
Q psy1110 294 KYF-RAGSVAFDAGHL-----RDASRLVEFMRD 320 (366)
Q Consensus 294 ~~f-k~G~~~~~~~g~-----~~~e~l~~fi~~ 320 (366)
+++ ++|+++..+.|. .+.+++++.|++
T Consensus 130 ~liD~~G~i~~~~~g~~~~~~~~~~~~l~~l~~ 162 (163)
T 1psq_A 130 FVLDTDNTIRYVEYVDNINSEPNFEAAIAAAKA 162 (163)
T ss_dssp EEECTTCBEEEEEECSBTTSCCCHHHHHHHHHH
T ss_pred EEEcCCCeEEEEEecCCcCCCCCHHHHHHHHHh
Confidence 777 789988877553 334677777653
No 496
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=41.88 E-value=53 Score=25.57 Aligned_cols=59 Identities=8% Similarity=-0.013 Sum_probs=36.8
Q ss_pred HHHhhcCCCCeEEEEeeecccCC----------------------cchhccCCcc--ceEEeeecCeeeEeecCCccHHH
Q psy1110 17 LAKEIVKPKAITLGLIERLTEKA----------------------DPVCTREKAK--KKVRRQKNAEVKYVYENGNTKDK 72 (366)
Q Consensus 17 la~e~~~~~~I~~~~Vdc~~~~~----------------------~~lc~~~~I~--Pti~~f~~g~~~~~y~g~r~~~~ 72 (366)
|++++.+ .++.+..|+.+.+.. ..++..++|. ||+.++.+.+.. .+.+ .+.++
T Consensus 59 l~~~~~~-~~~~vi~i~~d~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~v~~~P~~~lid~~G~i-~~~~-~~~~~ 135 (142)
T 3eur_A 59 INGFTAA-KKLKVLSIYPDEELDEWKKHRNDFAKEWTNGYDKELVIKNKNLYDLRAIPTLYLLDKNKTV-LLKD-ATLQK 135 (142)
T ss_dssp HHHHHHT-TSEEEEEEECSSCHHHHHHHGGGSCTTSEEEECTTCHHHHTTCSCCTTCSEEEEECTTCBE-EEEE-ECHHH
T ss_pred HHHHhcc-CCeEEEEEEcCCCHHHHHHHHHhcccccccccCccchhhhhhhcCCCcCCeEEEECCCCcE-EecC-CCHHH
Confidence 4555543 568888887754310 0158889998 999998754322 2222 35788
Q ss_pred HHHHHh
Q psy1110 73 IIEFVR 78 (366)
Q Consensus 73 i~~fi~ 78 (366)
|.+|++
T Consensus 136 l~~~l~ 141 (142)
T 3eur_A 136 VEQYLA 141 (142)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 888875
No 497
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=41.73 E-value=4.1 Score=33.54 Aligned_cols=86 Identities=8% Similarity=0.039 Sum_probs=55.3
Q ss_pred CcCCcceeeecc-ccccccccCCC---CCCCCccceeEEEEecccc----------------------------cccccc
Q psy1110 237 SVGRGWELRQVG-TGKRIKSINSG---SFSPRQITGILAAVDVTRE----------------------------KSLGKR 284 (366)
Q Consensus 237 ~~~~~~~~~~c~-~c~~~~p~~~~---~~~~~~~~v~~a~vd~~~~----------------------------~~l~~~ 284 (366)
.+...|.+.||+ +|....|.+.+ .|.+...++.+..++.+.. ..+.+.
T Consensus 35 ~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~~~~~~vv~is~d~~~d~~~~~~~~~~~~~~~~~~~~~l~d~~~~~~~~ 114 (174)
T 1xzo_A 35 VWLADFIFTNCETICPPMTAHMTDLQKKLKAENIDVRIISFSVDPENDKPKQLKKFAANYPLSFDNWDFLTGYSQSEIEE 114 (174)
T ss_dssp CEEEEEECSCCSSCCCSHHHHHHHHHHHHHHTTCCCEEEEEESCTTTCCHHHHHHHHTTSCCCGGGEEEEBCSCHHHHHH
T ss_pred EEEEEEEcCCCcchhHHHHHHHHHHHHHhhhcCCcEEEEEEEeCCCCCCHHHHHHHHHHcCCCCcceEEEeCCCHHHHHH
Confidence 344566778999 99999988633 4443332466666665310 000111
Q ss_pred ----------------cccccCCeEEEe-cCCceeeecCCCC--CHHHHHHHHhCCC
Q psy1110 285 ----------------FDIKGFPTLKYF-RAGSVAFDAGHLR--DASRLVEFMRDPT 322 (366)
Q Consensus 285 ----------------~~I~~~Ptl~~f-k~G~~~~~~~g~~--~~e~l~~fi~~~~ 322 (366)
+++...|+++++ ++|+++..+.|.. +.++|.+.|++.+
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~p~~~lid~~G~i~~~~~g~~~~~~~~l~~~l~~ll 171 (174)
T 1xzo_A 115 FALKSFKAIVKKPEGEDQVIHQSSFYLVGPDGKVLKDYNGVENTPYDDIISDVKSAS 171 (174)
T ss_dssp HHHHHHCCCCCCCSSCCSCCSCCEEEEECTTSEEEEEEESSSSCCHHHHHHHHHHHT
T ss_pred HHHhhcCeeEeecCCCCeeeeeeEEEEECCCCeEEEEEcCCCCCCHHHHHHHHHHHH
Confidence 345678975555 8999999988876 4788888887654
No 498
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=40.59 E-value=34 Score=29.58 Aligned_cols=67 Identities=12% Similarity=0.067 Sum_probs=42.3
Q ss_pred chHHHhhcCCCCeEEEEeeecc---------------------------cCCcchhccCCcc--ceEEeeecCeeeEeec
Q psy1110 15 SPLAKEIVKPKAITLGLIERLT---------------------------EKADPVCTREKAK--KKVRRQKNAEVKYVYE 65 (366)
Q Consensus 15 ~~la~e~~~~~~I~~~~Vdc~~---------------------------~~~~~lc~~~~I~--Pti~~f~~g~~~~~y~ 65 (366)
..|++++.. .++.|..|+++. .....++..++|. |++.++.+.+.. .|.
T Consensus 82 ~~l~~~~~~-~~v~vv~Vs~d~~~~~~~d~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~v~~~P~~~liD~~G~i-~~~ 159 (218)
T 3u5r_E 82 AKFAGDYAG-QGLAVVAINSNDAQAFPEETLERVGAEVKAYGYGFPYLKDASQSVAKAYGAACTPDFFLYDRERRL-VYH 159 (218)
T ss_dssp HHHHHHHTT-TTEEEEEEECSCTTTCGGGSHHHHHHHHHHHTCCSCEEECTTCHHHHHHTCCEESEEEEECTTCBE-EEE
T ss_pred HHHHHHHHh-CCcEEEEEECCcccccccCCHHHHHHHHHHhCCCccEEECCccHHHHHcCCCCCCeEEEECCCCcE-EEe
Confidence 345566652 458999998831 1123799999999 999999643322 343
Q ss_pred C-----------CccHHHHHHHHhCcCCc
Q psy1110 66 N-----------GNTKDKIIEFVRNPQAT 83 (366)
Q Consensus 66 g-----------~r~~~~i~~fi~~~~~~ 83 (366)
| ..+.+.|.+.+...+..
T Consensus 160 g~~d~~~~~~~~~~~~~~l~~~i~~ll~~ 188 (218)
T 3u5r_E 160 GQFDDARPGNGKDVTGADLRAAVDAVLKG 188 (218)
T ss_dssp ECSSSCCTTSCCCCCCHHHHHHHHHHHTT
T ss_pred ccccccccccccccCHHHHHHHHHHHHcC
Confidence 3 33567777777665543
No 499
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=40.50 E-value=10 Score=30.53 Aligned_cols=35 Identities=14% Similarity=0.352 Sum_probs=22.9
Q ss_pred chhhhhhhccCCeEEEEEE---CCCChhhhcccHHHHH
Q psy1110 106 DDNFDLVIQEESSVLVMFY---APWCGHCKKLKPEYEE 140 (366)
Q Consensus 106 ~~~~~~~i~~~k~vlV~F~---a~wC~~Ck~~~p~~e~ 140 (366)
.+.++.+|++++.|+..=. +|.|+.|.+....+..
T Consensus 10 ~e~i~~~i~~~~VvvF~Kgt~~~P~C~fc~~ak~lL~~ 47 (118)
T 2wul_A 10 AEQLDALVKKDKVVVFLKGTPEQPQCGFSNAVVQILRL 47 (118)
T ss_dssp HHHHHHHHHHSSEEEEESBCSSSBSSHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCEEEEEcCCCCCCCCHHHHHHHHHHHH
Confidence 4567788877665433211 3579999988776654
No 500
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=40.31 E-value=5.5 Score=32.94 Aligned_cols=76 Identities=7% Similarity=-0.003 Sum_probs=42.6
Q ss_pred ceeeeccccccccccCCCCCCCCccceeEEEEec----------------------cc-cccccccccccc---------
Q psy1110 242 WELRQVGTGKRIKSINSGSFSPRQITGILAAVDV----------------------TR-EKSLGKRFDIKG--------- 289 (366)
Q Consensus 242 ~~~~~c~~c~~~~p~~~~~~~~~~~~v~~a~vd~----------------------~~-~~~l~~~~~I~~--------- 289 (366)
|.+.||++|..-.|.+.+.++.. .++.+.-+.. +. ...+.+.|++..
T Consensus 51 ~~~~~c~~C~~e~~~l~~~~~~~-~~v~vv~Is~d~~~~~~~~~~~~~~~~~~~l~D~~~~~~~~~~gv~~~~~~~~g~~ 129 (165)
T 1q98_A 51 FPSIDTGVCATSVRKFNQQAAKL-SNTIVLCISADLPFAQARFCGAEGIENAKTVSTFRNHALHSQLGVDIQTGPLAGLT 129 (165)
T ss_dssp CSCSCSSCCCHHHHHHHHHHHHS-TTEEEEEEESSCHHHHTTCTTTTTCTTEEEEECTTCTHHHHHTTCEECSSTTTTSB
T ss_pred ECCCCCCccHHHHHHHHHHHHHc-CCCEEEEEeCCCHHHHHHHHHHcCCCceEEeeccccchHHHHhCceecccccCCcc
Confidence 34679999998888763322211 2233333321 11 344555666653
Q ss_pred CCeEEEe-cCCceeeecCC-----CCCHHHHHHHH
Q psy1110 290 FPTLKYF-RAGSVAFDAGH-----LRDASRLVEFM 318 (366)
Q Consensus 290 ~Ptl~~f-k~G~~~~~~~g-----~~~~e~l~~fi 318 (366)
.|+.+++ ++|+++..+.| ..+.+++++.|
T Consensus 130 ~p~~~liD~~G~i~~~~~~~~~~~~~~~~~~l~~l 164 (165)
T 1q98_A 130 SRAVIVLDEQNNVLHSQLVEEIKEEPNYEAALAVL 164 (165)
T ss_dssp CCEEEEECTTSBEEEEEECSBTTSCCCHHHHHHTT
T ss_pred ceeEEEEcCCCEEEEEEeCCCCCCCCCHHHHHHhh
Confidence 3887777 68888877743 23455555543
Done!