Query psy11100
Match_columns 110
No_of_seqs 107 out of 1261
Neff 10.7
Searched_HMMs 29240
Date Fri Aug 16 17:59:56 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11100.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11100hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4h5i_A Guanine nucleotide-exch 99.8 3.1E-18 1.1E-22 111.0 12.5 78 11-102 266-344 (365)
2 4gqb_B Methylosome protein 50; 99.7 8.2E-17 2.8E-21 103.8 12.2 85 10-108 123-208 (344)
3 2ynn_A Coatomer subunit beta'; 99.7 5.1E-17 1.7E-21 102.7 9.7 87 8-108 7-93 (304)
4 2ymu_A WD-40 repeat protein; u 99.7 8.7E-17 3E-21 108.4 10.6 76 10-100 12-87 (577)
5 3vu4_A KMHSV2; beta-propeller 99.7 3.2E-16 1.1E-20 101.1 12.8 81 9-103 190-273 (355)
6 1vyh_C Platelet-activating fac 99.7 9.5E-17 3.2E-21 105.3 10.0 84 11-108 105-188 (410)
7 3ow8_A WD repeat-containing pr 99.7 1.5E-16 5.1E-21 101.5 10.5 84 11-108 203-286 (321)
8 4ery_A WD repeat-containing pr 99.7 4.3E-16 1.5E-20 98.3 12.0 86 9-108 18-103 (312)
9 2pm7_B Protein transport prote 99.7 8.9E-16 3E-20 96.8 11.9 82 10-103 5-88 (297)
10 3zwl_B Eukaryotic translation 99.7 7.7E-16 2.6E-20 98.1 11.6 84 10-107 28-111 (369)
11 1got_B GT-beta; complex (GTP-b 99.7 7.8E-16 2.7E-20 98.6 11.2 81 11-105 181-261 (340)
12 3fm0_A Protein CIAO1; WDR39,SG 99.7 2.2E-15 7.6E-20 96.7 12.9 82 10-103 57-138 (345)
13 4aow_A Guanine nucleotide-bind 99.7 3.4E-15 1.2E-19 94.5 13.6 88 9-105 33-121 (340)
14 2xzm_R RACK1; ribosome, transl 99.7 2.8E-15 9.6E-20 96.1 13.2 79 9-101 71-149 (343)
15 1vyh_C Platelet-activating fac 99.7 4.7E-16 1.6E-20 102.0 9.4 84 10-107 146-229 (410)
16 3bg1_A Protein SEC13 homolog; 99.7 1E-15 3.5E-20 97.3 10.7 85 7-103 6-92 (316)
17 3frx_A Guanine nucleotide-bind 99.7 2.4E-15 8.1E-20 95.7 12.2 78 10-101 61-138 (319)
18 3ow8_A WD repeat-containing pr 99.7 2.1E-15 7.3E-20 96.2 12.0 76 11-100 245-320 (321)
19 3vl1_A 26S proteasome regulato 99.7 1.4E-15 4.7E-20 99.0 11.2 85 10-108 135-219 (420)
20 4ery_A WD repeat-containing pr 99.7 2.6E-15 8.7E-20 94.8 11.7 84 10-107 61-144 (312)
21 2ynn_A Coatomer subunit beta'; 99.7 2.4E-15 8.3E-20 95.0 11.6 78 12-103 53-130 (304)
22 3f3f_A Nucleoporin SEH1; struc 99.7 2.5E-15 8.5E-20 94.7 11.6 87 7-103 4-92 (351)
23 3frx_A Guanine nucleotide-bind 99.7 1.1E-15 3.9E-20 97.2 10.0 93 7-108 10-103 (319)
24 1nr0_A Actin interacting prote 99.7 1.4E-15 4.7E-20 104.1 11.1 83 10-106 186-275 (611)
25 3iz6_a 40S ribosomal protein R 99.7 9.4E-16 3.2E-20 99.6 9.7 80 8-101 60-139 (380)
26 1got_B GT-beta; complex (GTP-b 99.6 6.4E-15 2.2E-19 94.4 12.9 82 8-103 49-130 (340)
27 4gq1_A NUP37; propeller, trans 99.6 1E-15 3.5E-20 99.9 9.2 84 10-107 132-224 (393)
28 2xzm_R RACK1; ribosome, transl 99.6 5.2E-15 1.8E-19 94.8 12.3 94 8-108 15-114 (343)
29 2hes_X YDR267CP; beta-propelle 99.6 4.5E-15 1.5E-19 94.8 11.4 83 10-102 103-185 (330)
30 4gqb_B Methylosome protein 50; 99.6 3.5E-15 1.2E-19 96.2 10.9 79 11-104 254-334 (344)
31 2hes_X YDR267CP; beta-propelle 99.6 6.3E-15 2.1E-19 94.1 11.9 83 12-101 56-138 (330)
32 4g56_B MGC81050 protein; prote 99.6 3.9E-15 1.3E-19 96.2 11.0 77 11-102 266-344 (357)
33 4e54_B DNA damage-binding prot 99.6 2.4E-15 8.1E-20 99.1 9.8 80 12-103 117-198 (435)
34 1erj_A Transcriptional repress 99.6 4E-15 1.4E-19 97.0 10.7 77 15-105 124-200 (393)
35 4g56_B MGC81050 protein; prote 99.6 5.6E-15 1.9E-19 95.4 10.9 82 11-106 136-218 (357)
36 3f3f_A Nucleoporin SEH1; struc 99.6 4E-15 1.4E-19 93.8 9.7 97 11-107 211-343 (351)
37 3mmy_A MRNA export factor; mRN 99.6 1.3E-14 4.4E-19 92.4 11.5 85 9-105 34-121 (368)
38 2aq5_A Coronin-1A; WD40 repeat 99.6 8.3E-15 2.8E-19 95.4 10.6 91 11-108 78-170 (402)
39 3iz6_a 40S ribosomal protein R 99.6 8.2E-15 2.8E-19 95.2 10.4 83 10-105 201-284 (380)
40 1nr0_A Actin interacting prote 99.6 9.5E-15 3.3E-19 100.0 11.1 83 11-107 144-227 (611)
41 3fm0_A Protein CIAO1; WDR39,SG 99.6 3E-14 1E-18 91.4 12.7 83 10-103 101-183 (345)
42 2ymu_A WD-40 repeat protein; u 99.6 8.3E-15 2.9E-19 98.7 10.4 73 11-98 505-577 (577)
43 3lrv_A PRE-mRNA-splicing facto 99.6 1.6E-14 5.5E-19 92.5 10.8 80 12-106 168-249 (343)
44 3sfz_A APAF-1, apoptotic pepti 99.6 1.4E-14 4.7E-19 105.0 11.5 85 10-108 611-695 (1249)
45 3jrp_A Fusion protein of prote 99.6 8.1E-15 2.8E-19 93.8 9.2 83 9-103 6-90 (379)
46 3dm0_A Maltose-binding peripla 99.6 2.6E-14 9E-19 98.8 12.2 80 9-102 425-504 (694)
47 3mkq_A Coatomer beta'-subunit; 99.6 8E-15 2.7E-19 102.2 9.6 87 8-108 7-93 (814)
48 3k26_A Polycomb protein EED; W 99.6 2.5E-14 8.6E-19 91.1 11.1 83 12-108 113-199 (366)
49 4aow_A Guanine nucleotide-bind 99.6 2.4E-14 8.4E-19 90.6 10.9 94 10-103 211-339 (340)
50 3lrv_A PRE-mRNA-splicing facto 99.6 3.2E-14 1.1E-18 91.1 11.4 84 8-105 119-205 (343)
51 2pbi_B Guanine nucleotide-bind 99.6 4.2E-14 1.4E-18 91.2 12.0 81 8-102 58-138 (354)
52 2pbi_B Guanine nucleotide-bind 99.6 2.9E-14 1E-18 91.9 11.2 82 12-107 152-235 (354)
53 2aq5_A Coronin-1A; WD40 repeat 99.6 1.7E-14 5.7E-19 94.0 10.1 84 11-108 128-214 (402)
54 4ggc_A P55CDC, cell division c 99.6 5.6E-14 1.9E-18 88.2 12.1 77 12-102 238-316 (318)
55 4gga_A P55CDC, cell division c 99.6 9E-14 3.1E-18 91.2 12.1 77 13-103 319-397 (420)
56 1erj_A Transcriptional repress 99.6 3.9E-14 1.3E-18 92.4 10.3 95 11-107 253-347 (393)
57 2oaj_A Protein SNI1; WD40 repe 99.6 3E-14 1E-18 101.5 10.5 92 12-104 486-608 (902)
58 2oit_A Nucleoporin 214KDA; NH2 99.6 4E-14 1.4E-18 93.8 10.1 78 9-100 144-222 (434)
59 3k26_A Polycomb protein EED; W 99.6 6.9E-14 2.4E-18 89.1 10.7 82 12-107 67-153 (366)
60 3mmy_A MRNA export factor; mRN 99.5 5.6E-14 1.9E-18 89.5 10.1 84 10-108 82-167 (368)
61 1k8k_C P40, ARP2/3 complex 41 99.5 1.3E-13 4.3E-18 88.2 11.8 101 7-107 135-239 (372)
62 3dm0_A Maltose-binding peripla 99.5 6.6E-14 2.3E-18 96.9 10.9 83 11-107 514-598 (694)
63 1sq9_A Antiviral protein SKI8; 99.5 9.8E-14 3.3E-18 89.6 11.1 77 13-103 290-397 (397)
64 2pm7_B Protein transport prote 99.5 1.3E-13 4.4E-18 86.9 11.3 82 10-103 49-134 (297)
65 3dwl_C Actin-related protein 2 99.5 3E-14 1E-18 91.7 8.2 95 9-104 141-239 (377)
66 3odt_A Protein DOA1; ubiquitin 99.5 2.6E-13 8.9E-18 84.9 12.0 81 8-103 12-92 (313)
67 2j04_A TAU60, YPL007P, hypothe 99.5 6.5E-14 2.2E-18 95.4 9.8 78 9-103 80-162 (588)
68 1pgu_A Actin interacting prote 99.5 1.5E-13 5.2E-18 92.9 11.6 83 10-106 484-578 (615)
69 4a11_B DNA excision repair pro 99.5 9.6E-14 3.3E-18 89.5 9.9 98 8-106 37-136 (408)
70 2vdu_B TRNA (guanine-N(7)-)-me 99.5 8.4E-14 2.9E-18 92.0 9.8 83 10-107 191-277 (450)
71 1yfq_A Cell cycle arrest prote 99.5 3.2E-13 1.1E-17 85.6 12.1 85 8-103 5-91 (342)
72 1k8k_C P40, ARP2/3 complex 41 99.5 1.2E-13 4.3E-18 88.3 10.3 81 11-103 5-85 (372)
73 1sq9_A Antiviral protein SKI8; 99.5 8.1E-14 2.8E-18 90.0 9.5 81 14-108 233-329 (397)
74 4h5i_A Guanine nucleotide-exch 99.5 1.3E-13 4.6E-18 89.3 10.5 89 9-107 214-306 (365)
75 2pm9_A Protein WEB1, protein t 99.5 1.1E-13 3.8E-18 89.7 10.0 79 12-104 260-340 (416)
76 4ggc_A P55CDC, cell division c 99.5 8.2E-14 2.8E-18 87.4 9.0 76 16-107 27-104 (318)
77 3i2n_A WD repeat-containing pr 99.5 2.8E-13 9.5E-18 86.1 11.5 93 12-104 257-356 (357)
78 3ei3_B DNA damage-binding prot 99.5 1.9E-13 6.6E-18 88.2 10.8 85 12-107 202-288 (383)
79 3dwl_C Actin-related protein 2 99.5 9.7E-15 3.3E-19 94.0 4.7 80 12-103 9-88 (377)
80 1r5m_A SIR4-interacting protei 99.5 1.9E-13 6.3E-18 88.5 10.6 79 13-106 107-185 (425)
81 3bg1_A Protein SEC13 homolog; 99.5 1.5E-13 5.1E-18 87.3 9.9 81 10-102 53-137 (316)
82 3odt_A Protein DOA1; ubiquitin 99.5 2.4E-13 8.3E-18 85.0 10.5 80 12-107 223-302 (313)
83 4a11_B DNA excision repair pro 99.5 5.3E-13 1.8E-17 86.1 12.1 97 11-107 242-371 (408)
84 1gxr_A ESG1, transducin-like e 99.5 2.8E-13 9.6E-18 85.4 10.5 82 11-106 138-219 (337)
85 4e54_B DNA damage-binding prot 99.5 6E-14 2.1E-18 92.4 7.7 84 11-105 247-331 (435)
86 3gre_A Serine/threonine-protei 99.5 2.6E-13 9E-18 88.9 10.4 84 8-100 57-141 (437)
87 3mkq_A Coatomer beta'-subunit; 99.5 3.6E-13 1.2E-17 93.9 11.4 77 12-102 53-129 (814)
88 1yfq_A Cell cycle arrest prote 99.5 3E-13 1E-17 85.7 10.1 92 9-108 188-289 (342)
89 3dw8_B Serine/threonine-protei 99.5 3E-13 1E-17 88.5 10.3 81 10-104 173-261 (447)
90 2oaj_A Protein SNI1; WD40 repe 99.5 1.4E-13 4.7E-18 98.1 9.3 84 9-107 570-670 (902)
91 3dw8_B Serine/threonine-protei 99.5 4E-13 1.4E-17 88.0 10.8 86 11-107 223-322 (447)
92 1pgu_A Actin interacting prote 99.5 2.6E-13 9E-18 91.7 10.1 76 13-102 530-615 (615)
93 3jro_A Fusion protein of prote 99.5 1.1E-13 3.6E-18 96.9 8.3 83 9-103 4-88 (753)
94 2j04_A TAU60, YPL007P, hypothe 99.5 3.1E-13 1.1E-17 92.2 10.3 80 16-104 131-214 (588)
95 2w18_A PALB2, fancn, partner a 99.5 5.7E-13 1.9E-17 86.2 10.6 74 11-100 282-356 (356)
96 3ei3_B DNA damage-binding prot 99.5 1.2E-12 4E-17 84.6 12.1 76 12-102 161-237 (383)
97 2pm9_A Protein WEB1, protein t 99.5 3.1E-13 1.1E-17 87.7 9.4 83 11-103 64-147 (416)
98 1gxr_A ESG1, transducin-like e 99.5 1.3E-12 4.6E-17 82.3 11.3 84 12-107 95-178 (337)
99 3zwl_B Eukaryotic translation 99.5 9.1E-13 3.1E-17 83.9 10.4 79 16-107 177-255 (369)
100 4aez_A CDC20, WD repeat-contai 99.5 7.7E-13 2.6E-17 86.2 10.1 83 11-107 214-299 (401)
101 3i2n_A WD repeat-containing pr 99.5 7.3E-13 2.5E-17 84.2 9.7 83 8-103 12-101 (357)
102 2j04_B YDR362CP, TAU91; beta p 99.4 3E-13 1E-17 91.7 8.1 80 11-104 263-345 (524)
103 3jrp_A Fusion protein of prote 99.4 3.1E-12 1.1E-16 81.8 11.9 83 11-103 144-242 (379)
104 3sfz_A APAF-1, apoptotic pepti 99.4 1.6E-12 5.5E-17 94.3 11.7 82 12-107 655-738 (1249)
105 3vl1_A 26S proteasome regulato 99.4 1.4E-12 4.7E-17 84.9 10.2 80 15-108 98-177 (420)
106 1r5m_A SIR4-interacting protei 99.4 1.3E-12 4.5E-17 84.5 9.8 81 12-107 245-325 (425)
107 3v7d_B Cell division control p 99.4 3.2E-12 1.1E-16 84.3 11.8 80 11-105 159-240 (464)
108 3gre_A Serine/threonine-protei 99.4 2E-12 6.8E-17 84.7 10.6 82 13-108 167-252 (437)
109 2j04_B YDR362CP, TAU91; beta p 99.4 4.9E-13 1.7E-17 90.6 7.7 73 16-102 357-429 (524)
110 3v7d_B Cell division control p 99.4 5.5E-12 1.9E-16 83.2 12.0 79 11-105 307-385 (464)
111 2xyi_A Probable histone-bindin 99.4 7E-12 2.4E-16 82.5 12.2 82 10-102 227-310 (430)
112 2xyi_A Probable histone-bindin 99.4 4.7E-12 1.6E-16 83.4 11.0 77 12-101 275-353 (430)
113 2vdu_B TRNA (guanine-N(7)-)-me 99.4 6.6E-12 2.3E-16 83.0 11.4 80 12-105 100-184 (450)
114 2oit_A Nucleoporin 214KDA; NH2 99.4 9.4E-13 3.2E-17 87.3 6.9 90 12-104 90-184 (434)
115 4aez_A CDC20, WD repeat-contai 99.4 1.6E-11 5.4E-16 80.0 12.6 77 10-102 130-206 (401)
116 4gga_A P55CDC, cell division c 99.4 1.1E-11 3.7E-16 81.3 11.7 76 12-103 145-220 (420)
117 3jro_A Fusion protein of prote 99.4 9.4E-12 3.2E-16 87.2 11.6 82 10-103 49-134 (753)
118 2w18_A PALB2, fancn, partner a 99.3 5E-12 1.7E-16 81.8 8.4 80 12-105 176-273 (356)
119 4gq1_A NUP37; propeller, trans 99.3 5.8E-13 2E-17 86.9 2.7 80 17-105 92-179 (393)
120 1p22_A F-BOX/WD-repeat protein 99.3 2.6E-11 8.8E-16 79.8 10.4 79 12-108 131-209 (435)
121 2ovr_B FBW7, F-BOX/WD repeat p 99.3 3.2E-11 1.1E-15 79.4 9.7 82 9-107 113-194 (445)
122 1p22_A F-BOX/WD-repeat protein 99.3 8.4E-11 2.9E-15 77.3 10.8 83 8-108 250-332 (435)
123 3bws_A Protein LP49; two-domai 99.2 7.1E-11 2.4E-15 77.1 9.9 81 12-106 167-248 (433)
124 3vu4_A KMHSV2; beta-propeller 99.2 9.8E-11 3.4E-15 75.5 9.2 47 63-109 188-235 (355)
125 2hqs_A Protein TOLB; TOLB, PAL 99.2 3.6E-10 1.2E-14 74.4 11.7 78 12-104 176-259 (415)
126 2ovr_B FBW7, F-BOX/WD repeat p 99.2 2.9E-10 9.9E-15 74.8 10.0 77 12-106 237-313 (445)
127 1l0q_A Surface layer protein; 99.1 9.5E-10 3.2E-14 70.9 10.0 79 13-106 30-110 (391)
128 1k32_A Tricorn protease; prote 99.0 2E-09 6.8E-14 77.7 10.2 78 12-103 376-463 (1045)
129 1l0q_A Surface layer protein; 99.0 3.7E-09 1.3E-13 68.1 10.5 80 12-106 197-280 (391)
130 2hqs_A Protein TOLB; TOLB, PAL 99.0 1.2E-08 4.2E-13 67.1 11.9 78 12-104 220-303 (415)
131 3bws_A Protein LP49; two-domai 99.0 6E-10 2.1E-14 72.7 5.1 79 15-107 123-206 (433)
132 3o4h_A Acylamino-acid-releasin 98.9 7.8E-09 2.7E-13 70.3 8.9 72 18-104 153-230 (582)
133 1nir_A Nitrite reductase; hemo 98.9 2.5E-08 8.4E-13 67.9 10.8 75 17-106 181-262 (543)
134 1pby_B Quinohemoprotein amine 98.9 1.9E-08 6.5E-13 63.3 8.8 79 13-108 239-317 (337)
135 2ecf_A Dipeptidyl peptidase IV 98.9 1.9E-08 6.6E-13 69.9 9.2 73 15-102 37-139 (741)
136 2ojh_A Uncharacterized protein 98.8 3.4E-08 1.2E-12 60.7 8.8 80 12-104 170-261 (297)
137 2ojh_A Uncharacterized protein 98.8 4.4E-08 1.5E-12 60.2 8.0 77 12-103 39-121 (297)
138 1jmx_B Amine dehydrogenase; ox 98.7 8.9E-08 3E-12 60.5 8.5 76 15-107 255-331 (349)
139 3o4h_A Acylamino-acid-releasin 98.7 2.1E-08 7.1E-13 68.2 5.6 74 11-99 191-274 (582)
140 2ecf_A Dipeptidyl peptidase IV 98.7 5.3E-08 1.8E-12 67.7 7.5 72 16-104 110-184 (741)
141 3hfq_A Uncharacterized protein 98.7 3.2E-07 1.1E-11 58.4 10.3 79 15-104 240-322 (347)
142 1xfd_A DIP, dipeptidyl aminope 98.7 1.5E-08 5.1E-13 70.2 4.2 75 15-104 17-103 (723)
143 1xfd_A DIP, dipeptidyl aminope 98.7 3.8E-08 1.3E-12 68.1 5.8 64 13-91 112-193 (723)
144 1nir_A Nitrite reductase; hemo 98.7 8E-08 2.7E-12 65.4 7.1 72 21-107 144-217 (543)
145 3vgz_A Uncharacterized protein 98.6 3.6E-07 1.2E-11 57.9 9.6 76 17-106 143-220 (353)
146 1z68_A Fibroblast activation p 98.6 6.8E-08 2.3E-12 67.0 6.7 70 17-104 62-142 (719)
147 3u4y_A Uncharacterized protein 98.6 2.5E-07 8.5E-12 58.4 8.6 78 14-106 40-122 (331)
148 3pe7_A Oligogalacturonate lyas 98.6 8.4E-08 2.9E-12 61.7 6.4 71 20-104 41-114 (388)
149 3vgz_A Uncharacterized protein 98.6 4.1E-07 1.4E-11 57.6 9.2 80 13-106 183-267 (353)
150 1ri6_A Putative isomerase YBHE 98.6 4E-07 1.4E-11 57.3 8.9 76 12-100 35-114 (343)
151 2z3z_A Dipeptidyl aminopeptida 98.6 6.3E-08 2.1E-12 67.0 5.4 77 12-103 118-246 (706)
152 2z3z_A Dipeptidyl aminopeptida 98.6 2.1E-07 7.2E-12 64.4 7.9 72 17-102 183-294 (706)
153 1k32_A Tricorn protease; prote 98.6 3.8E-07 1.3E-11 66.0 8.9 77 12-103 50-145 (1045)
154 3scy_A Hypothetical bacterial 98.6 2.4E-06 8.1E-11 54.7 11.7 81 13-104 257-342 (361)
155 1ri6_A Putative isomerase YBHE 98.6 9.1E-07 3.1E-11 55.7 9.5 75 15-100 231-307 (343)
156 2xdw_A Prolyl endopeptidase; a 98.5 5.6E-07 1.9E-11 62.7 8.8 77 12-103 122-219 (710)
157 3hfq_A Uncharacterized protein 98.5 1.3E-06 4.6E-11 55.5 9.9 77 13-100 84-170 (347)
158 4a5s_A Dipeptidyl peptidase 4 98.5 3.4E-07 1.2E-11 64.1 7.5 71 18-104 65-144 (740)
159 1pby_B Quinohemoprotein amine 98.5 5.9E-07 2E-11 56.4 7.7 73 16-105 83-167 (337)
160 1jmx_B Amine dehydrogenase; ox 98.5 5.7E-07 1.9E-11 56.8 7.6 74 16-103 44-136 (349)
161 1z68_A Fibroblast activation p 98.5 2.2E-07 7.4E-12 64.5 5.6 72 18-104 19-102 (719)
162 3scy_A Hypothetical bacterial 98.5 2.9E-06 9.8E-11 54.3 10.5 78 11-100 207-290 (361)
163 3azo_A Aminopeptidase; POP fam 98.5 1.6E-06 5.4E-11 59.7 9.6 81 12-103 185-276 (662)
164 3u4y_A Uncharacterized protein 98.5 1.6E-06 5.3E-11 54.7 8.8 79 14-104 175-255 (331)
165 2bkl_A Prolyl endopeptidase; m 98.4 4.4E-07 1.5E-11 63.1 6.0 76 12-103 118-213 (695)
166 2oiz_A Aromatic amine dehydrog 98.4 1.8E-06 6.3E-11 55.8 8.5 71 20-107 259-342 (361)
167 2dg1_A DRP35, lactonase; beta 98.4 1.3E-05 4.5E-10 50.6 12.1 79 12-104 42-124 (333)
168 3azo_A Aminopeptidase; POP fam 98.4 6.5E-07 2.2E-11 61.6 6.4 75 13-102 128-228 (662)
169 4a5s_A Dipeptidyl peptidase 4 98.4 8.7E-07 3E-11 62.1 6.9 75 14-104 16-104 (740)
170 2gop_A Trilobed protease; beta 98.4 3E-06 1E-10 53.8 8.6 73 16-104 60-164 (347)
171 1jof_A Carboxy-CIS,CIS-muconat 98.4 2.1E-05 7.3E-10 50.6 12.3 76 13-100 143-223 (365)
172 3e5z_A Putative gluconolactona 98.3 2.6E-05 8.7E-10 48.7 11.0 76 13-104 26-102 (296)
173 3c5m_A Oligogalacturonate lyas 98.2 9E-07 3.1E-11 56.9 4.0 73 17-104 38-114 (396)
174 1jof_A Carboxy-CIS,CIS-muconat 98.2 5.8E-06 2E-10 53.3 7.0 75 16-102 255-342 (365)
175 1q7f_A NHL, brain tumor CG1071 98.2 6.8E-05 2.3E-09 46.4 11.1 73 14-102 206-281 (286)
176 1xip_A Nucleoporin NUP159; bet 98.1 1.6E-05 5.6E-10 52.3 8.1 70 12-103 124-193 (388)
177 3fvz_A Peptidyl-glycine alpha- 98.1 0.0001 3.5E-09 46.9 11.4 75 14-102 23-122 (329)
178 3pe7_A Oligogalacturonate lyas 98.1 5.1E-05 1.8E-09 48.7 9.4 79 12-104 78-180 (388)
179 2oiz_A Aromatic amine dehydrog 98.0 1.2E-05 4.1E-10 52.0 5.8 75 19-107 54-146 (361)
180 1xip_A Nucleoporin NUP159; bet 98.0 8.5E-05 2.9E-09 48.9 9.8 73 12-104 86-158 (388)
181 1q7f_A NHL, brain tumor CG1071 98.0 0.00011 3.8E-09 45.4 9.8 73 13-100 162-237 (286)
182 3fvz_A Peptidyl-glycine alpha- 98.0 0.00012 4.2E-09 46.5 10.2 80 13-107 141-233 (329)
183 1yr2_A Prolyl oligopeptidase; 98.0 2.2E-05 7.5E-10 55.1 6.6 75 13-103 161-254 (741)
184 3c5m_A Oligogalacturonate lyas 97.9 0.00012 4E-09 47.0 8.3 72 16-104 239-332 (396)
185 2xdw_A Prolyl endopeptidase; a 97.8 0.00014 4.7E-09 50.8 8.9 75 17-101 173-268 (710)
186 2bkl_A Prolyl endopeptidase; m 97.8 9.9E-05 3.4E-09 51.5 8.2 76 18-103 171-263 (695)
187 1pjx_A Dfpase, DIISOPROPYLFLUO 97.8 0.00077 2.6E-08 41.9 11.3 73 15-101 226-299 (314)
188 3e5z_A Putative gluconolactona 97.8 0.00027 9.2E-09 44.0 8.8 79 12-104 169-248 (296)
189 1rwi_B Serine/threonine-protei 97.8 0.00051 1.8E-08 41.9 9.8 76 15-104 192-267 (270)
190 1qks_A Cytochrome CD1 nitrite 97.7 0.00053 1.8E-08 47.2 10.2 75 16-105 198-279 (567)
191 2mad_H Methylamine dehydrogena 97.7 0.00047 1.6E-08 44.9 9.2 74 19-107 70-162 (373)
192 3iuj_A Prolyl endopeptidase; h 97.7 9.9E-05 3.4E-09 51.6 6.1 77 10-103 124-219 (693)
193 3no2_A Uncharacterized protein 97.6 0.00015 5.3E-09 45.3 6.1 66 26-108 5-71 (276)
194 2dg1_A DRP35, lactonase; beta 97.6 0.0024 8.1E-08 40.2 11.2 78 12-103 84-173 (333)
195 3dsm_A Uncharacterized protein 97.5 0.00078 2.7E-08 42.8 8.5 79 15-108 225-308 (328)
196 1rwi_B Serine/threonine-protei 97.5 0.0017 6E-08 39.5 9.8 74 15-102 150-223 (270)
197 3sjl_D Methylamine dehydrogena 97.5 0.00016 5.6E-09 47.6 5.1 75 20-108 83-176 (386)
198 3no2_A Uncharacterized protein 97.5 0.00059 2E-08 42.6 7.3 74 19-108 129-202 (276)
199 2mad_H Methylamine dehydrogena 97.5 0.0024 8E-08 41.7 10.3 74 19-107 271-356 (373)
200 3g4e_A Regucalcin; six bladed 97.5 0.002 6.7E-08 40.3 9.6 86 16-108 150-236 (297)
201 3dr2_A Exported gluconolactona 97.4 0.0059 2E-07 38.2 10.7 70 15-100 45-115 (305)
202 1qks_A Cytochrome CD1 nitrite 97.3 0.0015 5E-08 45.1 8.1 69 24-107 165-235 (567)
203 2z2n_A Virginiamycin B lyase; 97.3 0.0077 2.6E-07 36.9 10.7 74 13-100 13-86 (299)
204 2z2n_A Virginiamycin B lyase; 97.3 0.01 3.5E-07 36.4 11.0 76 13-103 55-130 (299)
205 2gop_A Trilobed protease; beta 97.2 0.0058 2E-07 38.5 9.5 70 11-100 259-330 (347)
206 1mda_H Methylamine dehydrogena 97.2 0.0021 7.3E-08 42.0 7.5 74 20-108 269-353 (368)
207 1pjx_A Dfpase, DIISOPROPYLFLUO 97.2 0.0066 2.3E-07 37.7 9.4 72 15-103 18-102 (314)
208 1yr2_A Prolyl oligopeptidase; 97.1 0.0037 1.3E-07 44.0 8.8 74 18-102 212-304 (741)
209 2hz6_A Endoplasmic reticulum t 97.1 0.00085 2.9E-08 43.5 5.0 66 25-106 8-73 (369)
210 3g4e_A Regucalcin; six bladed 97.0 0.016 5.5E-07 36.1 10.2 73 14-104 12-85 (297)
211 3c75_H MADH, methylamine dehyd 97.0 0.0029 9.9E-08 42.2 6.9 74 20-108 324-409 (426)
212 3dsm_A Uncharacterized protein 97.0 0.0074 2.5E-07 38.3 8.4 74 17-106 46-119 (328)
213 3c75_H MADH, methylamine dehyd 97.0 0.00086 2.9E-08 44.7 4.1 76 19-108 122-216 (426)
214 2ghs_A AGR_C_1268P; regucalcin 96.9 0.019 6.4E-07 36.4 10.1 71 16-104 50-121 (326)
215 3hrp_A Uncharacterized protein 96.9 0.014 4.9E-07 38.4 9.4 73 15-103 131-205 (409)
216 2ghs_A AGR_C_1268P; regucalcin 96.8 0.021 7.2E-07 36.2 9.4 79 16-104 180-262 (326)
217 2qc5_A Streptogramin B lactona 96.8 0.036 1.2E-06 33.9 10.9 73 14-100 19-91 (300)
218 1mda_H Methylamine dehydrogena 96.8 0.0026 8.8E-08 41.6 5.2 77 8-101 61-158 (368)
219 2qe8_A Uncharacterized protein 96.7 0.023 7.7E-07 36.3 9.1 80 12-105 64-158 (343)
220 2qc5_A Streptogramin B lactona 96.7 0.044 1.5E-06 33.5 11.0 72 15-100 62-133 (300)
221 3sjl_D Methylamine dehydrogena 96.6 0.016 5.3E-07 38.3 7.7 76 19-109 284-371 (386)
222 3hrp_A Uncharacterized protein 96.4 0.073 2.5E-06 35.0 10.2 69 16-99 324-408 (409)
223 3dr2_A Exported gluconolactona 96.2 0.03 1E-06 35.0 7.4 32 71-102 188-225 (305)
224 2xe4_A Oligopeptidase B; hydro 96.2 0.014 4.9E-07 41.3 6.1 72 16-103 175-258 (751)
225 3iuj_A Prolyl endopeptidase; h 96.0 0.083 2.8E-06 37.0 9.4 74 18-102 178-269 (693)
226 2iwa_A Glutamine cyclotransfer 95.8 0.087 3E-06 33.0 7.8 73 21-108 111-188 (266)
227 2p4o_A Hypothetical protein; p 95.5 0.24 8.1E-06 31.0 10.6 73 15-103 32-106 (306)
228 2xe4_A Oligopeptidase B; hydro 95.4 0.11 3.8E-06 36.8 8.2 72 19-102 225-305 (751)
229 1yiq_A Quinohemoprotein alcoho 95.4 0.045 1.5E-06 38.5 6.1 32 77-108 481-512 (689)
230 3pbp_A Nucleoporin NUP82; beta 95.3 0.22 7.5E-06 33.6 8.8 83 16-101 67-158 (452)
231 2ece_A 462AA long hypothetical 95.3 0.089 3E-06 35.6 7.0 76 16-106 139-242 (462)
232 3nok_A Glutaminyl cyclase; bet 95.3 0.16 5.4E-06 31.9 7.6 70 23-107 142-216 (268)
233 1fwx_A Nitrous oxide reductase 95.3 0.041 1.4E-06 38.3 5.4 82 16-101 278-361 (595)
234 1kb0_A Quinohemoprotein alcoho 95.1 0.045 1.5E-06 38.5 5.5 34 75-108 481-514 (677)
235 3nol_A Glutamine cyclotransfer 95.0 0.14 4.8E-06 32.0 7.0 35 72-107 173-207 (262)
236 2iwa_A Glutamine cyclotransfer 95.0 0.36 1.2E-05 30.2 10.8 40 8-47 14-55 (266)
237 3mbr_X Glutamine cyclotransfer 94.8 0.28 9.7E-06 30.3 7.8 70 23-107 111-185 (243)
238 2ece_A 462AA long hypothetical 94.8 0.22 7.5E-06 33.7 7.7 70 18-101 191-289 (462)
239 3nok_A Glutaminyl cyclase; bet 94.4 0.43 1.5E-05 30.0 8.0 32 15-47 55-86 (268)
240 2qe8_A Uncharacterized protein 94.3 0.21 7.2E-06 31.7 6.8 64 15-92 248-312 (343)
241 2hz6_A Endoplasmic reticulum t 94.2 0.0083 2.8E-07 38.9 0.0 70 21-106 125-197 (369)
242 3nol_A Glutamine cyclotransfer 93.4 0.86 3E-05 28.5 9.3 31 16-47 44-76 (262)
243 3pbp_A Nucleoporin NUP82; beta 92.9 1.4 4.9E-05 29.7 9.9 80 14-97 124-208 (452)
244 3tc9_A Hypothetical hydrolase; 92.5 1.5 5.2E-05 29.0 9.5 70 17-100 228-300 (430)
245 1k3i_A Galactose oxidase precu 91.3 1.3 4.6E-05 30.8 7.7 74 19-104 190-277 (656)
246 1fwx_A Nitrous oxide reductase 91.0 1.7 5.7E-05 30.5 7.8 31 72-102 278-309 (595)
247 2fp8_A Strictosidine synthase; 90.8 1.9 6.6E-05 26.9 9.1 30 72-101 186-216 (322)
248 1yiq_A Quinohemoprotein alcoho 89.6 4.2 0.00014 28.8 9.6 73 19-105 239-342 (689)
249 2ad6_A Methanol dehydrogenase 89.1 0.81 2.8E-05 31.6 5.1 28 81-108 474-501 (571)
250 1kb0_A Quinohemoprotein alcoho 88.3 3.5 0.00012 29.1 7.9 77 19-107 247-352 (677)
251 3hxj_A Pyrrolo-quinoline quino 86.9 3.2 0.00011 25.6 6.5 26 18-44 140-165 (330)
252 2fp8_A Strictosidine synthase; 86.5 4.2 0.00015 25.3 8.1 32 15-46 19-50 (322)
253 1tl2_A L10, protein (tachylect 86.4 1.6 5.4E-05 26.9 4.7 75 15-101 41-116 (236)
254 4gq2_M Nucleoporin NUP120; bet 86.4 1 3.6E-05 33.1 4.5 35 72-106 237-271 (950)
255 1npe_A Nidogen, entactin; glyc 86.2 4 0.00014 24.6 10.8 71 17-101 38-110 (267)
256 3mbr_X Glutamine cyclotransfer 86.0 4.4 0.00015 25.0 10.3 33 14-47 20-54 (243)
257 1k3i_A Galactose oxidase precu 85.9 4.8 0.00016 28.1 7.5 74 19-105 247-327 (656)
258 3q7m_A Lipoprotein YFGL, BAMB; 84.0 6.1 0.00021 25.0 8.0 22 26-47 53-74 (376)
259 4hw6_A Hypothetical protein, I 83.3 7.8 0.00027 25.7 8.3 69 18-100 231-303 (433)
260 1flg_A Protein (quinoprotein e 83.3 1.7 5.8E-05 30.1 4.3 28 81-108 496-523 (582)
261 1kv9_A Type II quinohemoprotei 82.7 10 0.00035 26.7 9.0 75 19-105 234-337 (668)
262 1npe_A Nidogen, entactin; glyc 80.9 7 0.00024 23.5 11.7 72 15-101 122-198 (267)
263 2p9w_A MAL S 1 allergenic prot 80.9 9.2 0.00031 24.8 9.6 74 16-101 138-215 (334)
264 4gq2_M Nucleoporin NUP120; bet 80.7 5.8 0.0002 29.3 6.4 31 16-46 237-267 (950)
265 4a2l_A BT_4663, two-component 79.6 14 0.00049 26.3 11.4 72 15-103 406-482 (795)
266 3hxj_A Pyrrolo-quinoline quino 79.1 7.1 0.00024 24.0 5.8 61 26-103 107-167 (330)
267 4fhn_B Nucleoporin NUP120; pro 79.0 0.99 3.4E-05 33.8 2.1 35 72-106 239-273 (1139)
268 3kya_A Putative phosphatase; s 78.7 13 0.00046 25.4 8.5 80 18-99 250-339 (496)
269 3tc9_A Hypothetical hydrolase; 76.2 14 0.00049 24.4 8.9 31 72-102 227-258 (430)
270 2xzh_A Clathrin heavy chain 1; 75.4 15 0.0005 24.2 10.3 74 17-104 262-335 (365)
271 1kv9_A Type II quinohemoprotei 74.8 3.2 0.00011 29.2 3.5 31 78-108 465-495 (668)
272 1w6s_A Methanol dehydrogenase 73.5 8.4 0.00029 26.9 5.4 28 81-108 483-510 (599)
273 3qqz_A Putative uncharacterize 72.1 15 0.0005 22.7 12.7 76 12-102 24-101 (255)
274 3f7f_A Nucleoporin NUP120; nuc 72.0 4.5 0.00015 29.2 3.7 33 72-106 223-255 (729)
275 3qqz_A Putative uncharacterize 71.4 15 0.00053 22.6 9.9 84 8-99 63-149 (255)
276 4fhn_B Nucleoporin NUP120; pro 71.3 5.9 0.0002 29.8 4.4 31 16-46 239-269 (1139)
277 3sre_A PON1, serum paraoxonase 70.4 19 0.00066 23.4 10.6 31 71-101 221-252 (355)
278 3q7m_A Lipoprotein YFGL, BAMB; 70.3 18 0.0006 22.9 9.3 61 27-105 240-300 (376)
279 3sbq_A Nitrous-oxide reductase 68.7 29 0.00098 24.7 7.6 79 19-101 327-408 (638)
280 1bpo_A Protein (clathrin); cla 68.5 26 0.00089 24.1 11.1 75 17-105 261-335 (494)
281 2ism_A Putative oxidoreductase 66.6 22 0.00076 22.7 9.5 72 15-101 31-114 (352)
282 3f7f_A Nucleoporin NUP120; nuc 66.1 19 0.00064 26.1 5.8 30 16-47 223-252 (729)
283 2g8s_A Glucose/sorbosone dehyd 65.9 23 0.0008 22.6 6.7 28 15-43 18-46 (353)
284 4a2l_A BT_4663, two-component 64.3 36 0.0012 24.2 11.0 72 15-103 357-438 (795)
285 2p9w_A MAL S 1 allergenic prot 62.8 29 0.00097 22.6 9.2 78 15-105 13-116 (334)
286 3a9g_A Putative uncharacterize 59.5 32 0.0011 22.1 8.0 27 15-42 29-55 (354)
287 3v65_B Low-density lipoprotein 58.5 34 0.0012 22.1 10.2 76 16-106 247-323 (386)
288 4hw6_A Hypothetical protein, I 57.2 39 0.0013 22.4 8.7 58 16-88 140-199 (433)
289 1cru_A Protein (soluble quinop 55.5 44 0.0015 22.4 8.9 31 14-44 26-56 (454)
290 3v9f_A Two-component system se 52.4 60 0.0021 23.1 10.6 71 15-102 450-525 (781)
291 2xbg_A YCF48-like protein; pho 51.6 42 0.0014 21.0 11.4 70 12-97 160-230 (327)
292 2ad6_A Methanol dehydrogenase 51.5 56 0.0019 22.5 6.2 22 26-47 115-136 (571)
293 3sov_A LRP-6, low-density lipo 50.4 45 0.0015 21.0 9.8 77 16-107 167-244 (318)
294 2vpj_A Kelch-like protein 12; 49.3 42 0.0014 20.4 5.1 24 81-104 253-281 (301)
295 1n7d_A LDL receptor, low-densi 48.4 51 0.0017 23.5 5.7 30 72-101 541-571 (699)
296 3zwu_A Alkaline phosphatase PH 47.5 72 0.0024 22.5 8.6 17 69-85 529-545 (592)
297 3das_A Putative oxidoreductase 47.2 56 0.0019 21.2 7.4 39 65-103 26-64 (347)
298 3v9f_A Two-component system se 45.7 79 0.0027 22.5 9.6 72 15-103 495-570 (781)
299 1ukf_A Avirulence protein AVRP 45.5 14 0.00046 22.0 2.0 33 73-105 121-154 (188)
300 2xn4_A Kelch-like protein 2; s 44.8 51 0.0017 20.0 5.7 25 81-105 251-280 (302)
301 3v64_C Agrin; beta propeller, 42.9 63 0.0021 20.5 10.9 76 15-105 203-279 (349)
302 1n7d_A LDL receptor, low-densi 42.1 75 0.0026 22.6 5.7 73 17-105 542-618 (699)
303 2xzh_A Clathrin heavy chain 1; 41.8 74 0.0025 21.0 7.6 36 70-105 259-294 (365)
304 1ijq_A LDL receptor, low-densi 41.4 63 0.0021 20.1 12.5 72 15-101 120-195 (316)
305 3v64_C Agrin; beta propeller, 39.6 72 0.0024 20.3 11.7 72 15-101 159-234 (349)
306 3das_A Putative oxidoreductase 39.6 76 0.0026 20.6 10.1 33 14-46 31-63 (347)
307 1xi4_A Clathrin heavy chain; a 38.5 1.6E+02 0.0054 23.9 7.5 28 20-47 264-291 (1630)
308 3sbq_A Nitrous-oxide reductase 38.4 55 0.0019 23.4 4.4 30 72-101 324-354 (638)
309 1zso_A Hypothetical protein; s 37.8 52 0.0018 19.0 3.7 32 73-104 112-143 (164)
310 1w6s_A Methanol dehydrogenase 35.4 1.1E+02 0.0039 21.4 9.3 28 80-107 318-348 (599)
311 3ii7_A Kelch-like protein 7; p 34.1 80 0.0027 19.2 5.7 24 81-104 101-130 (306)
312 3s25_A Hypothetical 7-bladed b 33.4 90 0.0031 19.6 6.8 25 20-44 109-137 (302)
313 2p4o_A Hypothetical protein; p 33.3 84 0.0029 19.2 11.5 75 15-102 72-148 (306)
314 3v65_B Low-density lipoprotein 32.6 1E+02 0.0034 19.9 12.0 73 15-101 202-277 (386)
315 1bpo_A Protein (clathrin); cla 32.0 1.3E+02 0.0043 20.9 8.5 36 70-105 258-293 (494)
316 4asc_A Kelch repeat and BTB do 29.8 99 0.0034 18.9 4.9 13 93-105 269-281 (315)
317 1ijq_A LDL receptor, low-densi 29.3 1E+02 0.0036 19.1 10.2 31 15-45 30-61 (316)
318 3sre_A PON1, serum paraoxonase 28.7 1.2E+02 0.0042 19.7 9.0 61 16-88 222-284 (355)
319 1flg_A Protein (quinoprotein e 28.6 1.5E+02 0.0051 20.6 9.2 27 80-106 331-360 (582)
320 1cru_A Protein (soluble quinop 26.8 1.5E+02 0.005 19.9 7.6 26 70-95 404-430 (454)
321 3p5b_L Low density lipoprotein 25.1 1.5E+02 0.005 19.3 12.3 72 16-101 203-277 (400)
322 3kya_A Putative phosphatase; s 24.3 1.8E+02 0.0061 20.0 8.5 60 16-90 140-212 (496)
323 1zgk_A Kelch-like ECH-associat 24.0 1.3E+02 0.0044 18.3 5.2 25 81-105 262-291 (308)
324 3sov_A LRP-6, low-density lipo 21.6 1.6E+02 0.0054 18.5 11.9 73 15-101 122-197 (318)
No 1
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.79 E-value=3.1e-18 Score=110.99 Aligned_cols=78 Identities=13% Similarity=0.124 Sum_probs=71.0
Q ss_pred CCCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEe-eccCCCeEEEEEcCCCCeEEEec
Q psy11100 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSL-QGHSGKVRAIIWNEQYEKLTSSD 89 (110)
Q Consensus 11 ~~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~s~~ 89 (110)
.+|...|.+++|+|+|++|++|+.|+.|++||+.... .+..+ .+|...|.+++|||+|+.|++++
T Consensus 266 ~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~--------------~~~~~~~gH~~~V~~v~fSpdg~~laS~S 331 (365)
T 4h5i_A 266 TNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLS--------------MSKIFKQAHSFAITEVTISPDSTYVASVS 331 (365)
T ss_dssp ESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTE--------------EEEEETTSSSSCEEEEEECTTSCEEEEEE
T ss_pred cCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCc--------------EEEEecCcccCCEEEEEECCCCCEEEEEe
Confidence 4688999999999999999999999999999999876 55554 68999999999999999999999
Q ss_pred CCCcEEEEeCCCC
Q psy11100 90 ETGLIIVWMLYKC 102 (110)
Q Consensus 90 ~~~~i~~w~~~~~ 102 (110)
.|++|++|++..+
T Consensus 332 ~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 332 AANTIHIIKLPLN 344 (365)
T ss_dssp TTSEEEEEECCTT
T ss_pred CCCeEEEEEcCCC
Confidence 9999999998643
No 2
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.73 E-value=8.2e-17 Score=103.82 Aligned_cols=85 Identities=15% Similarity=0.175 Sum_probs=76.6
Q ss_pred cCCCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCC-eEEEe
Q psy11100 10 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYE-KLTSS 88 (110)
Q Consensus 10 ~~~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~ 88 (110)
..+|.+.|.+++|+|+|+.|++++.|+.|++||+..+. .+..+.+|...|.+++|+|++. .++++
T Consensus 123 ~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~--------------~~~~~~~h~~~V~~~~~~~~~~~~l~s~ 188 (344)
T 4gqb_B 123 KYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQV--------------VLSSYRAHAAQVTCVAASPHKDSVFLSC 188 (344)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE--------------EEEEECCCSSCEEEEEECSSCTTEEEEE
T ss_pred ccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCc--------------EEEEEcCcCCceEEEEecCCCCCceeee
Confidence 34799999999999999999999999999999999876 6788899999999999999986 58899
Q ss_pred cCCCcEEEEeCCCCCChhhh
Q psy11100 89 DETGLIIVWMLYKCNDDDEW 108 (110)
Q Consensus 89 ~~~~~i~~w~~~~~~~~~~~ 108 (110)
+.|+.|++||+++++...++
T Consensus 189 s~D~~v~iwd~~~~~~~~~~ 208 (344)
T 4gqb_B 189 SEDNRILLWDTRCPKPASQI 208 (344)
T ss_dssp ETTSCEEEEETTSSSCEEEC
T ss_pred ccccccccccccccceeeee
Confidence 99999999999988765543
No 3
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.72 E-value=5.1e-17 Score=102.75 Aligned_cols=87 Identities=15% Similarity=0.156 Sum_probs=78.4
Q ss_pred eccCCCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEE
Q psy11100 8 KIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTS 87 (110)
Q Consensus 8 ~~~~~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s 87 (110)
+...+|.+.|.+++|+|+++.+++++.|+.+++||+.... ....+..|...|.+++|+|++..+++
T Consensus 7 ~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~--------------~~~~~~~~~~~v~~~~~~~~~~~l~s 72 (304)
T 2ynn_A 7 KTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQV--------------EVRSIQVTETPVRAGKFIARKNWIIV 72 (304)
T ss_dssp EEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE--------------EEEEEECCSSCEEEEEEEGGGTEEEE
T ss_pred EeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCc--------------eeEEeeccCCcEEEEEEeCCCCEEEE
Confidence 4455899999999999999999999999999999998876 56778889999999999999999999
Q ss_pred ecCCCcEEEEeCCCCCChhhh
Q psy11100 88 SDETGLIIVWMLYKCNDDDEW 108 (110)
Q Consensus 88 ~~~~~~i~~w~~~~~~~~~~~ 108 (110)
++.|+.|++||+.+++.+.++
T Consensus 73 ~s~d~~i~vwd~~~~~~~~~~ 93 (304)
T 2ynn_A 73 GSDDFRIRVFNYNTGEKVVDF 93 (304)
T ss_dssp EETTSEEEEEETTTCCEEEEE
T ss_pred ECCCCEEEEEECCCCcEEEEE
Confidence 999999999999998766544
No 4
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.71 E-value=8.7e-17 Score=108.39 Aligned_cols=76 Identities=21% Similarity=0.368 Sum_probs=69.5
Q ss_pred cCCCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEec
Q psy11100 10 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSD 89 (110)
Q Consensus 10 ~~~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 89 (110)
..+|++.|++++|+|||++|++++.|+.|++||.. .. .+..+.+|...|.+++|+|++++|++++
T Consensus 12 L~GH~~~V~~~a~spdg~~las~~~d~~v~iWd~~-~~--------------~~~~l~gh~~~V~~l~fspdg~~las~~ 76 (577)
T 2ymu_A 12 LEAHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQ--------------LLQTLTGHSSSVWGVAFSPDGQTIASAS 76 (577)
T ss_dssp ECCCSSCEEEEEECTTSSCEEEEETTSEEEEECTT-SC--------------EEEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred ECCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECC-CC--------------EEEEEeCCCCCEEEEEECCCCCEEEEEe
Confidence 46899999999999999999999999999999964 33 5678899999999999999999999999
Q ss_pred CCCcEEEEeCC
Q psy11100 90 ETGLIIVWMLY 100 (110)
Q Consensus 90 ~~~~i~~w~~~ 100 (110)
.|+.|++||..
T Consensus 77 ~d~~i~vWd~~ 87 (577)
T 2ymu_A 77 DDKTVKLWNRN 87 (577)
T ss_dssp TTSCEEEEETT
T ss_pred CCCEEEEEECC
Confidence 99999999964
No 5
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.71 E-value=3.2e-16 Score=101.14 Aligned_cols=81 Identities=15% Similarity=0.356 Sum_probs=73.1
Q ss_pred ccCCCCCceEEEEEecCCCEEEEEecCCc-EEEEEcCCCCCcCCcccccccceeeeEEee-c-cCCCeEEEEEcCCCCeE
Q psy11100 9 IAIPNNTKVNCLAWHQNQGWIAVGGDDGL-LKVLKLDTGKESTGQVAAANVNLAMNQSLQ-G-HSGKVRAIIWNEQYEKL 85 (110)
Q Consensus 9 ~~~~h~~~v~~~~~~p~~~~l~~~~~~~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~v~~~~~s~~~~~l 85 (110)
...+|.+.|.+++|+|+|+++++++.|+. +++||+..+. .+..+. + |...|.+++|+|++..+
T Consensus 190 ~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~--------------~~~~~~~g~h~~~v~~~~~s~~~~~l 255 (355)
T 3vu4_A 190 LIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGV--------------LVREFRRGLDRADVVDMKWSTDGSKL 255 (355)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCC--------------EEEEEECTTCCSCEEEEEECTTSCEE
T ss_pred EEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCc--------------EEEEEEcCCCCCcEEEEEECCCCCEE
Confidence 34589999999999999999999999998 9999999876 566776 4 88999999999999999
Q ss_pred EEecCCCcEEEEeCCCCC
Q psy11100 86 TSSDETGLIIVWMLYKCN 103 (110)
Q Consensus 86 ~s~~~~~~i~~w~~~~~~ 103 (110)
++++.|++|++||++.+.
T Consensus 256 ~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 256 AVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp EEEETTCEEEEEESSCCS
T ss_pred EEEECCCEEEEEEccCCC
Confidence 999999999999997653
No 6
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.71 E-value=9.5e-17 Score=105.30 Aligned_cols=84 Identities=19% Similarity=0.306 Sum_probs=76.5
Q ss_pred CCCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecC
Q psy11100 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE 90 (110)
Q Consensus 11 ~~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 90 (110)
.+|.++|.+++|+|++..+++|+.|+.|++||...+. ....+.+|...|.+++|+|++..+++++.
T Consensus 105 ~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~--------------~~~~l~~h~~~V~~v~~~~~~~~l~sgs~ 170 (410)
T 1vyh_C 105 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGD--------------FERTLKGHTDSVQDISFDHSGKLLASCSA 170 (410)
T ss_dssp ECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCC--------------CCEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred cccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc--------------EEEEEeccCCcEEEEEEcCCCCEEEEEeC
Confidence 4799999999999999999999999999999999876 56788899999999999999999999999
Q ss_pred CCcEEEEeCCCCCChhhh
Q psy11100 91 TGLIIVWMLYKCNDDDEW 108 (110)
Q Consensus 91 ~~~i~~w~~~~~~~~~~~ 108 (110)
|++|++||+.+++.+.++
T Consensus 171 D~~i~iwd~~~~~~~~~~ 188 (410)
T 1vyh_C 171 DMTIKLWDFQGFECIRTM 188 (410)
T ss_dssp TSCCCEEETTSSCEEECC
T ss_pred CCeEEEEeCCCCceeEEE
Confidence 999999999887765443
No 7
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.70 E-value=1.5e-16 Score=101.53 Aligned_cols=84 Identities=15% Similarity=0.299 Sum_probs=76.3
Q ss_pred CCCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecC
Q psy11100 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE 90 (110)
Q Consensus 11 ~~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 90 (110)
.+|...|.+++|+|++++|++++.|+.+++||+.... ....+.+|...|.+++|+|++..+++++.
T Consensus 203 ~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~--------------~~~~~~~h~~~v~~~~~sp~~~~l~s~s~ 268 (321)
T 3ow8_A 203 EGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHAN--------------LAGTLSGHASWVLNVAFCPDDTHFVSSSS 268 (321)
T ss_dssp CCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCC--------------EEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred cccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcc--------------eeEEEcCCCCceEEEEECCCCCEEEEEeC
Confidence 4788999999999999999999999999999998876 56778899999999999999999999999
Q ss_pred CCcEEEEeCCCCCChhhh
Q psy11100 91 TGLIIVWMLYKCNDDDEW 108 (110)
Q Consensus 91 ~~~i~~w~~~~~~~~~~~ 108 (110)
|+.|++||+.++..+.++
T Consensus 269 D~~v~iwd~~~~~~~~~~ 286 (321)
T 3ow8_A 269 DKSVKVWDVGTRTCVHTF 286 (321)
T ss_dssp TSCEEEEETTTTEEEEEE
T ss_pred CCcEEEEeCCCCEEEEEE
Confidence 999999999988765543
No 8
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.70 E-value=4.3e-16 Score=98.34 Aligned_cols=86 Identities=17% Similarity=0.373 Sum_probs=76.9
Q ss_pred ccCCCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEe
Q psy11100 9 IAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSS 88 (110)
Q Consensus 9 ~~~~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 88 (110)
...+|.+.|.+++|+|+++++++++.|+.+++|+..... ....+..|...|.+++|+|++..++++
T Consensus 18 ~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~--------------~~~~~~~h~~~v~~~~~~~~~~~l~s~ 83 (312)
T 4ery_A 18 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGK--------------FEKTISGHKLGISDVAWSSDSNLLVSA 83 (312)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC--------------EEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred EEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcc--------------cchhhccCCCceEEEEEcCCCCEEEEE
Confidence 345899999999999999999999999999999998776 566788899999999999999999999
Q ss_pred cCCCcEEEEeCCCCCChhhh
Q psy11100 89 DETGLIIVWMLYKCNDDDEW 108 (110)
Q Consensus 89 ~~~~~i~~w~~~~~~~~~~~ 108 (110)
+.|+.|++||+.+++.+..+
T Consensus 84 ~~d~~i~vwd~~~~~~~~~~ 103 (312)
T 4ery_A 84 SDDKTLKIWDVSSGKCLKTL 103 (312)
T ss_dssp ETTSEEEEEETTTCCEEEEE
T ss_pred CCCCEEEEEECCCCcEEEEE
Confidence 99999999999988765443
No 9
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.68 E-value=8.9e-16 Score=96.75 Aligned_cols=82 Identities=18% Similarity=0.297 Sum_probs=71.4
Q ss_pred cCCCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCC--CCeEEE
Q psy11100 10 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQ--YEKLTS 87 (110)
Q Consensus 10 ~~~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~s 87 (110)
..+|.+.|.+++|+|+|+.|++++.|+.+++|++.... ......+.+|.+.|.+++|++. +..|++
T Consensus 5 ~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~------------~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s 72 (297)
T 2pm7_B 5 ANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGET------------HKLIDTLTGHEGPVWRVDWAHPKFGTILAS 72 (297)
T ss_dssp CCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSC------------BCCCEEECCCSSCEEEEEECCGGGCSEEEE
T ss_pred ccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCC------------cEEEEEEccccCCeEEEEecCCCcCCEEEE
Confidence 45899999999999999999999999999999997432 0145678899999999999864 889999
Q ss_pred ecCCCcEEEEeCCCCC
Q psy11100 88 SDETGLIIVWMLYKCN 103 (110)
Q Consensus 88 ~~~~~~i~~w~~~~~~ 103 (110)
++.|++|++||+++++
T Consensus 73 ~s~D~~v~iWd~~~~~ 88 (297)
T 2pm7_B 73 CSYDGKVMIWKEENGR 88 (297)
T ss_dssp EETTTEEEEEEBSSSC
T ss_pred EcCCCEEEEEEcCCCc
Confidence 9999999999998764
No 10
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.68 E-value=7.7e-16 Score=98.12 Aligned_cols=84 Identities=12% Similarity=0.107 Sum_probs=76.5
Q ss_pred cCCCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEec
Q psy11100 10 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSD 89 (110)
Q Consensus 10 ~~~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 89 (110)
..+|.+.|.+++|+|+++++++++.|+.+++||+.... ....+..|...|.+++|+|++..+++++
T Consensus 28 l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~--------------~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 93 (369)
T 3zwl_B 28 LTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGE--------------RLGTLDGHTGTIWSIDVDCFTKYCVTGS 93 (369)
T ss_dssp EECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCC--------------EEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred EEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCch--------------hhhhhhhcCCcEEEEEEcCCCCEEEEEe
Confidence 44899999999999999999999999999999998876 6678888999999999999999999999
Q ss_pred CCCcEEEEeCCCCCChhh
Q psy11100 90 ETGLIIVWMLYKCNDDDE 107 (110)
Q Consensus 90 ~~~~i~~w~~~~~~~~~~ 107 (110)
.|+.|++||+.+++.+..
T Consensus 94 ~dg~i~iwd~~~~~~~~~ 111 (369)
T 3zwl_B 94 ADYSIKLWDVSNGQCVAT 111 (369)
T ss_dssp TTTEEEEEETTTCCEEEE
T ss_pred CCCeEEEEECCCCcEEEE
Confidence 999999999998876543
No 11
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.68 E-value=7.8e-16 Score=98.62 Aligned_cols=81 Identities=15% Similarity=0.209 Sum_probs=74.4
Q ss_pred CCCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecC
Q psy11100 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE 90 (110)
Q Consensus 11 ~~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 90 (110)
.+|.+.|.+++|+|++..+++++.|+.+++||+.... ....+..|...|.+++|+|++..+++++.
T Consensus 181 ~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~--------------~~~~~~~h~~~v~~v~~~p~~~~l~s~s~ 246 (340)
T 1got_B 181 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGM--------------CRQTFTGHESDINAICFFPNGNAFATGSD 246 (340)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS--------------EEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred cCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe--------------eEEEEcCCcCCEEEEEEcCCCCEEEEEcC
Confidence 4799999999999999999999999999999999876 66778899999999999999999999999
Q ss_pred CCcEEEEeCCCCCCh
Q psy11100 91 TGLIIVWMLYKCNDD 105 (110)
Q Consensus 91 ~~~i~~w~~~~~~~~ 105 (110)
|+.|++||+++++.+
T Consensus 247 d~~v~iwd~~~~~~~ 261 (340)
T 1got_B 247 DATCRLFDLRADQEL 261 (340)
T ss_dssp TSCEEEEETTTTEEE
T ss_pred CCcEEEEECCCCcEE
Confidence 999999999876543
No 12
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.67 E-value=2.2e-15 Score=96.73 Aligned_cols=82 Identities=17% Similarity=0.345 Sum_probs=72.6
Q ss_pred cCCCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEec
Q psy11100 10 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSD 89 (110)
Q Consensus 10 ~~~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 89 (110)
..+|...|.+++|+|++++|++++.|+.+++|+..... ......+.+|...|.+++|+|++..|++++
T Consensus 57 ~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~------------~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s 124 (345)
T 3fm0_A 57 SEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDD------------FECVTTLEGHENEVKSVAWAPSGNLLATCS 124 (345)
T ss_dssp CSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-------------EEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred ccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCC------------eEEEEEccCCCCCceEEEEeCCCCEEEEEE
Confidence 45899999999999999999999999999999987653 124567889999999999999999999999
Q ss_pred CCCcEEEEeCCCCC
Q psy11100 90 ETGLIIVWMLYKCN 103 (110)
Q Consensus 90 ~~~~i~~w~~~~~~ 103 (110)
.|+.|++||+.++.
T Consensus 125 ~D~~v~iwd~~~~~ 138 (345)
T 3fm0_A 125 RDKSVWVWEVDEED 138 (345)
T ss_dssp TTSCEEEEEECTTS
T ss_pred CCCeEEEEECCCCC
Confidence 99999999998654
No 13
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.67 E-value=3.4e-15 Score=94.51 Aligned_cols=88 Identities=18% Similarity=0.161 Sum_probs=73.7
Q ss_pred ccCCCCCceEEEEEecC-CCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEE
Q psy11100 9 IAIPNNTKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTS 87 (110)
Q Consensus 9 ~~~~h~~~v~~~~~~p~-~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s 87 (110)
...+|++.|++++|+|+ +++|++|+.|+.|++||+...... .......+.+|...|.+++|+|++..+++
T Consensus 33 tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~---------~~~~~~~l~~h~~~V~~~~~s~dg~~l~s 103 (340)
T 4aow_A 33 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETN---------YGIPQRALRGHSHFVSDVVISSDGQFALS 103 (340)
T ss_dssp EECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSC---------SEEEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred EECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcc---------cceeeEEEeCCCCCEEEEEECCCCCEEEE
Confidence 34589999999999997 689999999999999999865310 01135667889999999999999999999
Q ss_pred ecCCCcEEEEeCCCCCCh
Q psy11100 88 SDETGLIIVWMLYKCNDD 105 (110)
Q Consensus 88 ~~~~~~i~~w~~~~~~~~ 105 (110)
++.|+.|++|+.......
T Consensus 104 ~~~d~~i~~~~~~~~~~~ 121 (340)
T 4aow_A 104 GSWDGTLRLWDLTTGTTT 121 (340)
T ss_dssp EETTSEEEEEETTTTEEE
T ss_pred EcccccceEEeeccccee
Confidence 999999999998876543
No 14
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.67 E-value=2.8e-15 Score=96.07 Aligned_cols=79 Identities=20% Similarity=0.294 Sum_probs=72.8
Q ss_pred ccCCCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEe
Q psy11100 9 IAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSS 88 (110)
Q Consensus 9 ~~~~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 88 (110)
...+|...|.+++|+|++.++++++.|+.+++||+..+. ....+.+|...|.+++|+|++..++++
T Consensus 71 ~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~--------------~~~~~~~h~~~v~~v~~sp~~~~l~s~ 136 (343)
T 2xzm_R 71 ALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGT--------------TYKRFVGHQSEVYSVAFSPDNRQILSA 136 (343)
T ss_dssp EECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSC--------------EEEEEECCCSCEEEEEECSSTTEEEEE
T ss_pred hhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCc--------------EEEEEcCCCCcEEEEEECCCCCEEEEE
Confidence 345899999999999999999999999999999999876 667788999999999999999999999
Q ss_pred cCCCcEEEEeCCC
Q psy11100 89 DETGLIIVWMLYK 101 (110)
Q Consensus 89 ~~~~~i~~w~~~~ 101 (110)
+.|+.|++||+..
T Consensus 137 ~~d~~i~~wd~~~ 149 (343)
T 2xzm_R 137 GAEREIKLWNILG 149 (343)
T ss_dssp ETTSCEEEEESSS
T ss_pred cCCCEEEEEeccC
Confidence 9999999999863
No 15
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.66 E-value=4.7e-16 Score=102.00 Aligned_cols=84 Identities=12% Similarity=0.164 Sum_probs=76.2
Q ss_pred cCCCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEec
Q psy11100 10 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSD 89 (110)
Q Consensus 10 ~~~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 89 (110)
..+|++.|.+++|+|+++.+++|+.|+.+++||+.... .+..+.+|...|.+++|+|++..+++++
T Consensus 146 l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~--------------~~~~~~~h~~~V~~v~~~p~~~~l~s~s 211 (410)
T 1vyh_C 146 LKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFE--------------CIRTMHGHDHNVSSVSIMPNGDHIVSAS 211 (410)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSC--------------EEECCCCCSSCEEEEEECSSSSEEEEEE
T ss_pred EeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCc--------------eeEEEcCCCCCEEEEEEeCCCCEEEEEe
Confidence 34799999999999999999999999999999998776 6677889999999999999999999999
Q ss_pred CCCcEEEEeCCCCCChhh
Q psy11100 90 ETGLIIVWMLYKCNDDDE 107 (110)
Q Consensus 90 ~~~~i~~w~~~~~~~~~~ 107 (110)
.|++|++||++++..+.+
T Consensus 212 ~D~~i~~wd~~~~~~~~~ 229 (410)
T 1vyh_C 212 RDKTIKMWEVQTGYCVKT 229 (410)
T ss_dssp TTSEEEEEETTTCCEEEE
T ss_pred CCCeEEEEECCCCcEEEE
Confidence 999999999998876543
No 16
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.66 E-value=1e-15 Score=97.26 Aligned_cols=85 Identities=16% Similarity=0.284 Sum_probs=68.0
Q ss_pred eeccCCCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcC--CCCe
Q psy11100 7 KKIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNE--QYEK 84 (110)
Q Consensus 7 ~~~~~~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~ 84 (110)
+.+..+|.+.|.+++|+|+|+.|++++.|+.+++||+.... ......+.+|...|.+++|++ ++..
T Consensus 6 ~~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~------------~~~~~~l~gH~~~V~~v~~~~~~~~~~ 73 (316)
T 3bg1_A 6 NTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGG------------QILIADLRGHEGPVWQVAWAHPMYGNI 73 (316)
T ss_dssp --------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTE------------EEEEEEEECCSSCEEEEEECCGGGSSC
T ss_pred eeecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCC------------cEEEEEEcCCCccEEEEEeCCCCCCCE
Confidence 34556899999999999999999999999999999998653 013567889999999999986 4889
Q ss_pred EEEecCCCcEEEEeCCCCC
Q psy11100 85 LTSSDETGLIIVWMLYKCN 103 (110)
Q Consensus 85 l~s~~~~~~i~~w~~~~~~ 103 (110)
|++++.|++|++||++++.
T Consensus 74 l~s~s~D~~v~iWd~~~~~ 92 (316)
T 3bg1_A 74 LASCSYDRKVIIWREENGT 92 (316)
T ss_dssp EEEEETTSCEEEECCSSSC
T ss_pred EEEEECCCEEEEEECCCCc
Confidence 9999999999999998764
No 17
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.66 E-value=2.4e-15 Score=95.71 Aligned_cols=78 Identities=17% Similarity=0.222 Sum_probs=72.6
Q ss_pred cCCCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEec
Q psy11100 10 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSD 89 (110)
Q Consensus 10 ~~~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 89 (110)
..+|...|.+++|+|++.++++++.|+.+++||+..+. ....+.+|...|.+++|+|++..+++++
T Consensus 61 ~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~--------------~~~~~~~h~~~v~~~~~~~~~~~l~s~s 126 (319)
T 3frx_A 61 FKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGE--------------TYQRFVGHKSDVMSVDIDKKASMIISGS 126 (319)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE--------------EEEEEECCSSCEEEEEECTTSCEEEEEE
T ss_pred EeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCC--------------eeEEEccCCCcEEEEEEcCCCCEEEEEe
Confidence 34899999999999999999999999999999999876 6678889999999999999999999999
Q ss_pred CCCcEEEEeCCC
Q psy11100 90 ETGLIIVWMLYK 101 (110)
Q Consensus 90 ~~~~i~~w~~~~ 101 (110)
.|++|++||++.
T Consensus 127 ~D~~i~vwd~~~ 138 (319)
T 3frx_A 127 RDKTIKVWTIKG 138 (319)
T ss_dssp TTSCEEEEETTS
T ss_pred CCCeEEEEECCC
Confidence 999999999864
No 18
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.66 E-value=2.1e-15 Score=96.18 Aligned_cols=76 Identities=16% Similarity=0.169 Sum_probs=70.8
Q ss_pred CCCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecC
Q psy11100 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE 90 (110)
Q Consensus 11 ~~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 90 (110)
.+|.+.|.+++|+|++..+++++.|+.+++||+.... .+..+..|...|.+++|+|++..|++++.
T Consensus 245 ~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~--------------~~~~~~~h~~~v~~v~~s~~g~~l~s~~~ 310 (321)
T 3ow8_A 245 SGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRT--------------CVHTFFDHQDQVWGVKYNGNGSKIVSVGD 310 (321)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE--------------EEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred cCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCE--------------EEEEEcCCCCcEEEEEECCCCCEEEEEeC
Confidence 4799999999999999999999999999999999876 67788899999999999999999999999
Q ss_pred CCcEEEEeCC
Q psy11100 91 TGLIIVWMLY 100 (110)
Q Consensus 91 ~~~i~~w~~~ 100 (110)
|+.|++||..
T Consensus 311 d~~i~vwd~p 320 (321)
T 3ow8_A 311 DQEIHIYDCP 320 (321)
T ss_dssp TCCEEEEECC
T ss_pred CCeEEEEeCC
Confidence 9999999964
No 19
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.66 E-value=1.4e-15 Score=99.03 Aligned_cols=85 Identities=16% Similarity=0.227 Sum_probs=76.5
Q ss_pred cCCCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEec
Q psy11100 10 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSD 89 (110)
Q Consensus 10 ~~~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 89 (110)
..+|.+.|.+++|+|+++.+++++.|+.+++||+.... ....+..|...|.+++|+|++..+++++
T Consensus 135 ~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~--------------~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 200 (420)
T 3vl1_A 135 DQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGS--------------NPRTLIGHRATVTDIAIIDRGRNVLSAS 200 (420)
T ss_dssp TTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC--------------CCEEEECCSSCEEEEEEETTTTEEEEEE
T ss_pred cccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCc--------------CceEEcCCCCcEEEEEEcCCCCEEEEEc
Confidence 34799999999999999999999999999999999876 5567888999999999999999999999
Q ss_pred CCCcEEEEeCCCCCChhhh
Q psy11100 90 ETGLIIVWMLYKCNDDDEW 108 (110)
Q Consensus 90 ~~~~i~~w~~~~~~~~~~~ 108 (110)
.|+.|++||+++++....+
T Consensus 201 ~d~~v~iwd~~~~~~~~~~ 219 (420)
T 3vl1_A 201 LDGTIRLWECGTGTTIHTF 219 (420)
T ss_dssp TTSCEEEEETTTTEEEEEE
T ss_pred CCCcEEEeECCCCceeEEe
Confidence 9999999999988765443
No 20
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.66 E-value=2.6e-15 Score=94.77 Aligned_cols=84 Identities=20% Similarity=0.307 Sum_probs=76.4
Q ss_pred cCCCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEec
Q psy11100 10 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSD 89 (110)
Q Consensus 10 ~~~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 89 (110)
..+|...|.+++|+|+++.+++++.|+.+++||+.... ....+..|...|.+++|+|++..+++++
T Consensus 61 ~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~--------------~~~~~~~~~~~v~~~~~~~~~~~l~s~~ 126 (312)
T 4ery_A 61 ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGK--------------CLKTLKGHSNYVFCCNFNPQSNLIVSGS 126 (312)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC--------------EEEEEECCSSCEEEEEECSSSSEEEEEE
T ss_pred hccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCc--------------EEEEEcCCCCCEEEEEEcCCCCEEEEEe
Confidence 34789999999999999999999999999999999876 6678889999999999999999999999
Q ss_pred CCCcEEEEeCCCCCChhh
Q psy11100 90 ETGLIIVWMLYKCNDDDE 107 (110)
Q Consensus 90 ~~~~i~~w~~~~~~~~~~ 107 (110)
.|+.|++||+++++.+..
T Consensus 127 ~d~~i~iwd~~~~~~~~~ 144 (312)
T 4ery_A 127 FDESVRIWDVKTGKCLKT 144 (312)
T ss_dssp TTSCEEEEETTTCCEEEE
T ss_pred CCCcEEEEECCCCEEEEE
Confidence 999999999998876544
No 21
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.66 E-value=2.4e-15 Score=95.02 Aligned_cols=78 Identities=21% Similarity=0.323 Sum_probs=72.8
Q ss_pred CCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecCC
Q psy11100 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDET 91 (110)
Q Consensus 12 ~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~ 91 (110)
.|...|.+++|+|+++.+++++.|+.+++||+..+. ....+.+|...|.+++|+|++..+++++.|
T Consensus 53 ~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~--------------~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D 118 (304)
T 2ynn_A 53 VTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGE--------------KVVDFEAHPDYIRSIAVHPTKPYVLSGSDD 118 (304)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCC--------------EEEEEECCSSCEEEEEECSSSSEEEEEETT
T ss_pred ccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCc--------------EEEEEeCCCCcEEEEEEcCCCCEEEEECCC
Confidence 688899999999999999999999999999999876 667888999999999999999999999999
Q ss_pred CcEEEEeCCCCC
Q psy11100 92 GLIIVWMLYKCN 103 (110)
Q Consensus 92 ~~i~~w~~~~~~ 103 (110)
++|++||++++.
T Consensus 119 ~~v~lWd~~~~~ 130 (304)
T 2ynn_A 119 LTVKLWNWENNW 130 (304)
T ss_dssp SCEEEEEGGGTT
T ss_pred CeEEEEECCCCc
Confidence 999999998764
No 22
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.66 E-value=2.5e-15 Score=94.72 Aligned_cols=87 Identities=18% Similarity=0.256 Sum_probs=74.7
Q ss_pred eeccCCCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcC--CCCe
Q psy11100 7 KKIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNE--QYEK 84 (110)
Q Consensus 7 ~~~~~~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~ 84 (110)
+.+..+|.+.|.+++|+|+++++++++.|+.+++|++.... ........+..|...|.+++|+| ++..
T Consensus 4 ~~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~----------~~~~~~~~~~~~~~~v~~~~~~~~~d~~~ 73 (351)
T 3f3f_A 4 QPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDT----------SNWELSDSWRAHDSSIVAIDWASPEYGRI 73 (351)
T ss_dssp CCEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSS----------CCEEEEEEEECCSSCEEEEEECCGGGCSE
T ss_pred cccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCC----------CcceecceeccCCCcEEEEEEcCCCCCCE
Confidence 45667999999999999999999999999999999998653 01124566778999999999999 5899
Q ss_pred EEEecCCCcEEEEeCCCCC
Q psy11100 85 LTSSDETGLIIVWMLYKCN 103 (110)
Q Consensus 85 l~s~~~~~~i~~w~~~~~~ 103 (110)
+++++.|+.|++||+.++.
T Consensus 74 l~s~~~dg~v~vwd~~~~~ 92 (351)
T 3f3f_A 74 IASASYDKTVKLWEEDPDQ 92 (351)
T ss_dssp EEEEETTSCEEEEEECTTS
T ss_pred EEEEcCCCeEEEEecCCCc
Confidence 9999999999999998764
No 23
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.65 E-value=1.1e-15 Score=97.17 Aligned_cols=93 Identities=17% Similarity=0.115 Sum_probs=76.2
Q ss_pred eeccCCCCCceEEEEEecCC-CEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeE
Q psy11100 7 KKIAIPNNTKVNCLAWHQNQ-GWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKL 85 (110)
Q Consensus 7 ~~~~~~h~~~v~~~~~~p~~-~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 85 (110)
.....+|++.|.+++|+|++ +++++++.|+.+++|++..... . .......+.+|...|.+++|+|++..+
T Consensus 10 ~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~---~------~~~~~~~~~~h~~~v~~~~~s~dg~~l 80 (319)
T 3frx_A 10 RGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQ---K------FGVPVRSFKGHSHIVQDCTLTADGAYA 80 (319)
T ss_dssp EEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETT---E------EEEEEEEEECCSSCEEEEEECTTSSEE
T ss_pred EEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCc---c------ccccceEEeCCcccEEEEEECCCCCEE
Confidence 33456899999999999964 8999999999999999874320 0 001356788999999999999999999
Q ss_pred EEecCCCcEEEEeCCCCCChhhh
Q psy11100 86 TSSDETGLIIVWMLYKCNDDDEW 108 (110)
Q Consensus 86 ~s~~~~~~i~~w~~~~~~~~~~~ 108 (110)
++++.|++|++||+.+++.+.++
T Consensus 81 ~s~s~D~~v~~wd~~~~~~~~~~ 103 (319)
T 3frx_A 81 LSASWDKTLRLWDVATGETYQRF 103 (319)
T ss_dssp EEEETTSEEEEEETTTTEEEEEE
T ss_pred EEEeCCCEEEEEECCCCCeeEEE
Confidence 99999999999999988765443
No 24
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.65 E-value=1.4e-15 Score=104.12 Aligned_cols=83 Identities=18% Similarity=0.319 Sum_probs=73.0
Q ss_pred cCCCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEee-------ccCCCeEEEEEcCCC
Q psy11100 10 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQ-------GHSGKVRAIIWNEQY 82 (110)
Q Consensus 10 ~~~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~v~~~~~s~~~ 82 (110)
..+|.+.|.+++|+|+|+.+++++.|+.+++||...+. ....+. +|.+.|.+++|+|++
T Consensus 186 l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~--------------~~~~~~~~~~~~~~h~~~V~~v~~spdg 251 (611)
T 1nr0_A 186 FGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGT--------------KTGVFEDDSLKNVAHSGSVFGLTWSPDG 251 (611)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC--------------EEEECBCTTSSSCSSSSCEEEEEECTTS
T ss_pred eccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCc--------------EeeeeccccccccccCCCEEEEEECCCC
Confidence 34799999999999999999999999999999998765 334442 689999999999999
Q ss_pred CeEEEecCCCcEEEEeCCCCCChh
Q psy11100 83 EKLTSSDETGLIIVWMLYKCNDDD 106 (110)
Q Consensus 83 ~~l~s~~~~~~i~~w~~~~~~~~~ 106 (110)
..|++++.|++|++||+.+++...
T Consensus 252 ~~l~s~s~D~~v~lWd~~~~~~~~ 275 (611)
T 1nr0_A 252 TKIASASADKTIKIWNVATLKVEK 275 (611)
T ss_dssp SEEEEEETTSEEEEEETTTTEEEE
T ss_pred CEEEEEeCCCeEEEEeCCCCceee
Confidence 999999999999999999876544
No 25
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.65 E-value=9.4e-16 Score=99.59 Aligned_cols=80 Identities=18% Similarity=0.265 Sum_probs=73.4
Q ss_pred eccCCCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEE
Q psy11100 8 KIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTS 87 (110)
Q Consensus 8 ~~~~~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s 87 (110)
+...+|.+.|.+++|+|++++|++++.|+.|++||..... ....+..|...|.+++|+|++..+++
T Consensus 60 ~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~--------------~~~~~~~h~~~v~~~~~s~~g~~las 125 (380)
T 3iz6_a 60 RTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQ--------------KTHAIKLHCPWVMECAFAPNGQSVAC 125 (380)
T ss_dssp EEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTE--------------EEEEEECCCTTCCCCEECTTSSEEEE
T ss_pred ecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc--------------cceEEecCCCCEEEEEECCCCCEEEE
Confidence 4456899999999999999999999999999999998876 56778889999999999999999999
Q ss_pred ecCCCcEEEEeCCC
Q psy11100 88 SDETGLIIVWMLYK 101 (110)
Q Consensus 88 ~~~~~~i~~w~~~~ 101 (110)
++.|+.+++|++.+
T Consensus 126 ~~~d~~v~iw~~~~ 139 (380)
T 3iz6_a 126 GGLDSACSIFNLSS 139 (380)
T ss_dssp CCSSSCCEEEECCC
T ss_pred eeCCCcEEEEECCC
Confidence 99999999999865
No 26
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.65 E-value=6.4e-15 Score=94.36 Aligned_cols=82 Identities=11% Similarity=0.131 Sum_probs=74.2
Q ss_pred eccCCCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEE
Q psy11100 8 KIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTS 87 (110)
Q Consensus 8 ~~~~~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s 87 (110)
....+|.+.|.+++|+|+++++++++.|+.+++||..... ....+..|...|.+++|+|++..+++
T Consensus 49 ~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~--------------~~~~~~~~~~~v~~~~~s~~~~~l~s 114 (340)
T 1got_B 49 RTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTN--------------KVHAIPLRSSWVMTCAYAPSGNYVAC 114 (340)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCC--------------EEEEEECSSSCEEEEEECTTSSEEEE
T ss_pred eeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCC--------------cceEeecCCccEEEEEECCCCCEEEE
Confidence 3455899999999999999999999999999999998876 56777889999999999999999999
Q ss_pred ecCCCcEEEEeCCCCC
Q psy11100 88 SDETGLIIVWMLYKCN 103 (110)
Q Consensus 88 ~~~~~~i~~w~~~~~~ 103 (110)
++.|+.+++|++.++.
T Consensus 115 ~~~d~~v~iw~~~~~~ 130 (340)
T 1got_B 115 GGLDNICSIYNLKTRE 130 (340)
T ss_dssp EETTCEEEEEETTTCS
T ss_pred EeCCCeEEEEECccCC
Confidence 9999999999997653
No 27
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.64 E-value=1e-15 Score=99.95 Aligned_cols=84 Identities=17% Similarity=0.086 Sum_probs=71.2
Q ss_pred cCCCCCceEEEEEec--------CCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCC
Q psy11100 10 AIPNNTKVNCLAWHQ--------NQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQ 81 (110)
Q Consensus 10 ~~~h~~~v~~~~~~p--------~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 81 (110)
..+|++.|.+++|+| ++++|++++.|+++++||+.... .......|...|.+++|+|+
T Consensus 132 ~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~--------------~~~~~~~~~~~v~~v~~~p~ 197 (393)
T 4gq1_A 132 KSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEG--------------PILAGYPLSSPGISVQFRPS 197 (393)
T ss_dssp TTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTE--------------EEEEEEECSSCEEEEEEETT
T ss_pred cCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCc--------------eeeeecCCCCCcEEEEECCC
Confidence 458999999999998 78999999999999999998765 45566778899999999998
Q ss_pred CC-eEEEecCCCcEEEEeCCCCCChhh
Q psy11100 82 YE-KLTSSDETGLIIVWMLYKCNDDDE 107 (110)
Q Consensus 82 ~~-~l~s~~~~~~i~~w~~~~~~~~~~ 107 (110)
+. .+++++.|++|++||+++++...+
T Consensus 198 ~~~~l~~~~~d~~v~~wd~~t~~~~~~ 224 (393)
T 4gq1_A 198 NPNQLIVGERNGNIRIFDWTLNLSAEE 224 (393)
T ss_dssp EEEEEEEEETTSEEEEEETTCCC----
T ss_pred CCceEEecCCCCEEEEEECCCCccccc
Confidence 75 699999999999999998876544
No 28
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.64 E-value=5.2e-15 Score=94.82 Aligned_cols=94 Identities=15% Similarity=0.133 Sum_probs=76.2
Q ss_pred eccCCCCCceEEEEE-----ec-CCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCC
Q psy11100 8 KIAIPNNTKVNCLAW-----HQ-NQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQ 81 (110)
Q Consensus 8 ~~~~~h~~~v~~~~~-----~p-~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 81 (110)
....+|++.|.+++| ++ ++++|++|+.|+.+++||+...... .........+.+|...|.+++|+|+
T Consensus 15 ~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~-------~~~~~~~~~l~~h~~~V~~~~~~~~ 87 (343)
T 2xzm_R 15 GILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQN-------GYFGIPHKALTGHNHFVSDLALSQE 87 (343)
T ss_dssp EEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCS-------SBSEEEEEEECCCSSCEEEEEECSS
T ss_pred eeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcc-------cccccccchhccCCCceEEEEECCC
Confidence 345589999999999 76 8999999999999999998754300 0001134567889999999999999
Q ss_pred CCeEEEecCCCcEEEEeCCCCCChhhh
Q psy11100 82 YEKLTSSDETGLIIVWMLYKCNDDDEW 108 (110)
Q Consensus 82 ~~~l~s~~~~~~i~~w~~~~~~~~~~~ 108 (110)
+..+++++.|++|++||+++++.+..+
T Consensus 88 ~~~l~s~s~D~~v~lwd~~~~~~~~~~ 114 (343)
T 2xzm_R 88 NCFAISSSWDKTLRLWDLRTGTTYKRF 114 (343)
T ss_dssp TTEEEEEETTSEEEEEETTSSCEEEEE
T ss_pred CCEEEEEcCCCcEEEEECCCCcEEEEE
Confidence 999999999999999999988765443
No 29
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.64 E-value=4.5e-15 Score=94.83 Aligned_cols=83 Identities=22% Similarity=0.341 Sum_probs=67.4
Q ss_pred cCCCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEec
Q psy11100 10 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSD 89 (110)
Q Consensus 10 ~~~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 89 (110)
..+|.+.|.+++|+|++++|++++.|+.+++||+.... ........+..|...|.+++|+|++..|++++
T Consensus 103 ~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~----------~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s 172 (330)
T 2hes_X 103 IEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESG----------EEYECISVLQEHSQDVKHVIWHPSEALLASSS 172 (330)
T ss_dssp EC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTC----------CCCEEEEEECCCSSCEEEEEECSSSSEEEEEE
T ss_pred EcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCC----------CCeEEEEEeccCCCceEEEEECCCCCEEEEEc
Confidence 35799999999999999999999999999999995321 00124567788999999999999999999999
Q ss_pred CCCcEEEEeCCCC
Q psy11100 90 ETGLIIVWMLYKC 102 (110)
Q Consensus 90 ~~~~i~~w~~~~~ 102 (110)
.|++|++||..++
T Consensus 173 ~D~~i~iW~~~~~ 185 (330)
T 2hes_X 173 YDDTVRIWKDYDD 185 (330)
T ss_dssp TTSCEEEEEEETT
T ss_pred CCCeEEEEECCCC
Confidence 9999999998765
No 30
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.64 E-value=3.5e-15 Score=96.24 Aligned_cols=79 Identities=18% Similarity=0.150 Sum_probs=67.2
Q ss_pred CCCCCceEEEEEecCC-CEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCe-EEEe
Q psy11100 11 IPNNTKVNCLAWHQNQ-GWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEK-LTSS 88 (110)
Q Consensus 11 ~~h~~~v~~~~~~p~~-~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-l~s~ 88 (110)
.+|.+.|.+++|+|++ .+|++++.|+.|++||+.... +..+.+|.+.|.+++|+|++.. ++++
T Consensus 254 ~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~---------------~~~~~~H~~~V~~v~~sp~~~~llas~ 318 (344)
T 4gqb_B 254 AVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSE---------------LFRSQAHRDFVRDATWSPLNHSLLTTV 318 (344)
T ss_dssp ECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCE---------------EEEECCCSSCEEEEEECSSSTTEEEEE
T ss_pred cCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCc---------------EEEEcCCCCCEEEEEEeCCCCeEEEEE
Confidence 3799999999999997 579999999999999998764 3457789999999999999875 7799
Q ss_pred cCCCcEEEEeCCCCCC
Q psy11100 89 DETGLIIVWMLYKCND 104 (110)
Q Consensus 89 ~~~~~i~~w~~~~~~~ 104 (110)
+.|++|++|++.+...
T Consensus 319 s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 319 GWDHQVVHHVVPTEPL 334 (344)
T ss_dssp ETTSCEEEEECCC---
T ss_pred cCCCeEEEEECCCCCC
Confidence 9999999999987543
No 31
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.63 E-value=6.3e-15 Score=94.13 Aligned_cols=83 Identities=13% Similarity=0.399 Sum_probs=63.7
Q ss_pred CCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecCC
Q psy11100 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDET 91 (110)
Q Consensus 12 ~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~ 91 (110)
+|.+.|.+++|+|+++.+++++.|+.+++|+....... .........+.+|...|.+++|+|++..|++++.|
T Consensus 56 ~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~-------~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D 128 (330)
T 2hes_X 56 AHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADR-------TFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRD 128 (330)
T ss_dssp CCCSCEEEEEECTTSSEEEEEETTSCEEEEEC--------------CCCEEEEEEC----CEEEEEECTTSCEEEEEETT
T ss_pred CccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCc-------cccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCC
Confidence 39999999999999999999999999999998643200 00112456778899999999999999999999999
Q ss_pred CcEEEEeCCC
Q psy11100 92 GLIIVWMLYK 101 (110)
Q Consensus 92 ~~i~~w~~~~ 101 (110)
++|++||+..
T Consensus 129 ~~v~iwd~~~ 138 (330)
T 2hes_X 129 KSVWIWETDE 138 (330)
T ss_dssp SCEEEEECCT
T ss_pred CEEEEEeccC
Confidence 9999999953
No 32
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.63 E-value=3.9e-15 Score=96.18 Aligned_cols=77 Identities=17% Similarity=0.200 Sum_probs=66.1
Q ss_pred CCCCCceEEEEEecCC-CEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcC-CCCeEEEe
Q psy11100 11 IPNNTKVNCLAWHQNQ-GWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNE-QYEKLTSS 88 (110)
Q Consensus 11 ~~h~~~v~~~~~~p~~-~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~ 88 (110)
.+|...|.+++|+|++ ++|++++.|+.|++||+.... .. ...+|.+.|.+++|+| ++..|+++
T Consensus 266 ~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~--------------~~-~~~~H~~~V~~vafsP~d~~~l~s~ 330 (357)
T 4g56_B 266 AVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSE--------------VF-RDLSHRDFVTGVAWSPLDHSKFTTV 330 (357)
T ss_dssp CCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCE--------------EE-EECCCSSCEEEEEECSSSTTEEEEE
T ss_pred eccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCc--------------Ee-EECCCCCCEEEEEEeCCCCCEEEEE
Confidence 3788999999999987 579999999999999998765 33 3457999999999998 78899999
Q ss_pred cCCCcEEEEeCCCC
Q psy11100 89 DETGLIIVWMLYKC 102 (110)
Q Consensus 89 ~~~~~i~~w~~~~~ 102 (110)
+.|++|++|++.+.
T Consensus 331 s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 331 GWDHKVLHHHLPSE 344 (357)
T ss_dssp ETTSCEEEEECC--
T ss_pred cCCCeEEEEECCCC
Confidence 99999999998754
No 33
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.63 E-value=2.4e-15 Score=99.13 Aligned_cols=80 Identities=18% Similarity=0.280 Sum_probs=67.5
Q ss_pred CCCCceEEEEEec-CCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcC-CCCeEEEec
Q psy11100 12 PNNTKVNCLAWHQ-NQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNE-QYEKLTSSD 89 (110)
Q Consensus 12 ~h~~~v~~~~~~p-~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~ 89 (110)
+|...|++++|+| ++.+|++|+.||.|++||+..... .....+.+|.+.|.+++|+| ++..|++++
T Consensus 117 ~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~------------~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s 184 (435)
T 4e54_B 117 PFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDK------------PTFIKGIGAGGSITGLKFNPLNTNQFYASS 184 (435)
T ss_dssp ECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSC------------CEEECCCSSSCCCCEEEECSSCTTEEEEEC
T ss_pred CCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCc------------eeEEEccCCCCCEEEEEEeCCCCCEEEEEe
Confidence 6788999999999 567899999999999999986540 12344567999999999998 678899999
Q ss_pred CCCcEEEEeCCCCC
Q psy11100 90 ETGLIIVWMLYKCN 103 (110)
Q Consensus 90 ~~~~i~~w~~~~~~ 103 (110)
.|++|++||++++.
T Consensus 185 ~D~~v~iwd~~~~~ 198 (435)
T 4e54_B 185 MEGTTRLQDFKGNI 198 (435)
T ss_dssp SSSCEEEEETTSCE
T ss_pred CCCEEEEeeccCCc
Confidence 99999999997653
No 34
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.63 E-value=4e-15 Score=97.02 Aligned_cols=77 Identities=18% Similarity=0.375 Sum_probs=70.5
Q ss_pred CceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecCCCcE
Q psy11100 15 TKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLI 94 (110)
Q Consensus 15 ~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~~~i 94 (110)
..|.+++|+|+|+++++++.|+.+++||+.... ....+.+|...|.+++|+|++..+++++.|++|
T Consensus 124 ~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~--------------~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v 189 (393)
T 1erj_A 124 LYIRSVCFSPDGKFLATGAEDRLIRIWDIENRK--------------IVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTV 189 (393)
T ss_dssp CBEEEEEECTTSSEEEEEETTSCEEEEETTTTE--------------EEEEECCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred eeEEEEEECCCCCEEEEEcCCCeEEEEECCCCc--------------EEEEEccCCCCEEEEEEcCCCCEEEEecCCCcE
Confidence 359999999999999999999999999998876 567788999999999999999999999999999
Q ss_pred EEEeCCCCCCh
Q psy11100 95 IVWMLYKCNDD 105 (110)
Q Consensus 95 ~~w~~~~~~~~ 105 (110)
++||+++++..
T Consensus 190 ~iwd~~~~~~~ 200 (393)
T 1erj_A 190 RIWDLRTGQCS 200 (393)
T ss_dssp EEEETTTTEEE
T ss_pred EEEECCCCeeE
Confidence 99999987654
No 35
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.62 E-value=5.6e-15 Score=95.43 Aligned_cols=82 Identities=22% Similarity=0.260 Sum_probs=74.0
Q ss_pred CCCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCC-eEEEec
Q psy11100 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYE-KLTSSD 89 (110)
Q Consensus 11 ~~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~ 89 (110)
.+|.+.|.+++|+|+++.+++++.|+.|++||..... ....+..|...|.+++|+|++. .+++++
T Consensus 136 ~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~--------------~~~~~~~h~~~v~~v~~s~~~~~~~~s~~ 201 (357)
T 4g56_B 136 YEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKA--------------VLKSYNAHSSEVNCVAACPGKDTIFLSCG 201 (357)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTE--------------EEEEECCCSSCEEEEEECTTCSSCEEEEE
T ss_pred CCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCc--------------EEEEEcCCCCCEEEEEEccCCCceeeeec
Confidence 3789999999999999999999999999999999876 6778889999999999999886 588999
Q ss_pred CCCcEEEEeCCCCCChh
Q psy11100 90 ETGLIIVWMLYKCNDDD 106 (110)
Q Consensus 90 ~~~~i~~w~~~~~~~~~ 106 (110)
.|+.|++||+++++...
T Consensus 202 ~dg~v~~wd~~~~~~~~ 218 (357)
T 4g56_B 202 EDGRILLWDTRKPKPAT 218 (357)
T ss_dssp TTSCEEECCTTSSSCBC
T ss_pred cCCceEEEECCCCceee
Confidence 99999999999876544
No 36
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.62 E-value=4e-15 Score=93.80 Aligned_cols=97 Identities=19% Similarity=0.376 Sum_probs=74.8
Q ss_pred CCCCCceEEEEEecCC----CEEEEEecCCcEEEEEcCCCCCcCCccc--------------------------------
Q psy11100 11 IPNNTKVNCLAWHQNQ----GWIAVGGDDGLLKVLKLDTGKESTGQVA-------------------------------- 54 (110)
Q Consensus 11 ~~h~~~v~~~~~~p~~----~~l~~~~~~~~v~~~~~~~~~~~~~~~~-------------------------------- 54 (110)
.+|.+.|.+++|+|++ .++++++.|+.+++||+...........
T Consensus 211 ~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (351)
T 3f3f_A 211 PGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAEL 290 (351)
T ss_dssp CCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------
T ss_pred CCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeee
Confidence 3689999999999998 7899999999999999976421100000
Q ss_pred ccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecCCCcEEEEeCCCCCChhh
Q psy11100 55 AANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYKCNDDDE 107 (110)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~~~i~~w~~~~~~~~~~ 107 (110)
........+..+.+|...|.+++|+|++..|++++.|+.|++|++.+++....
T Consensus 291 ~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~ 343 (351)
T 3f3f_A 291 QSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKC 343 (351)
T ss_dssp CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEE
T ss_pred cccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhh
Confidence 00111235667788999999999999999999999999999999998865543
No 37
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.61 E-value=1.3e-14 Score=92.42 Aligned_cols=85 Identities=13% Similarity=0.311 Sum_probs=73.2
Q ss_pred ccCCCCCceEEEEEecC---CCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeE
Q psy11100 9 IAIPNNTKVNCLAWHQN---QGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKL 85 (110)
Q Consensus 9 ~~~~h~~~v~~~~~~p~---~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 85 (110)
...+|.+.|.+++|+|+ |.++++++.|+.+++|++..... .....+..|...|.+++|+|++..+
T Consensus 34 ~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~------------~~~~~~~~h~~~v~~~~~~~~~~~l 101 (368)
T 3mmy_A 34 VTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQ------------TIPKAQQMHTGPVLDVCWSDDGSKV 101 (368)
T ss_dssp CSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSC------------EEEEEEEECSSCEEEEEECTTSSEE
T ss_pred eccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCc------------eeEEEeccccCCEEEEEECcCCCEE
Confidence 44589999999999999 59999999999999999987320 1336677899999999999999999
Q ss_pred EEecCCCcEEEEeCCCCCCh
Q psy11100 86 TSSDETGLIIVWMLYKCNDD 105 (110)
Q Consensus 86 ~s~~~~~~i~~w~~~~~~~~ 105 (110)
++++.|+.|++||+.+++..
T Consensus 102 ~s~~~dg~v~iwd~~~~~~~ 121 (368)
T 3mmy_A 102 FTASCDKTAKMWDLSSNQAI 121 (368)
T ss_dssp EEEETTSEEEEEETTTTEEE
T ss_pred EEEcCCCcEEEEEcCCCCce
Confidence 99999999999999887643
No 38
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.61 E-value=8.3e-15 Score=95.40 Aligned_cols=91 Identities=22% Similarity=0.307 Sum_probs=74.7
Q ss_pred CCCCCceEEEEEec-CCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCC-CeEEEe
Q psy11100 11 IPNNTKVNCLAWHQ-NQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQY-EKLTSS 88 (110)
Q Consensus 11 ~~h~~~v~~~~~~p-~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~s~ 88 (110)
.+|.+.|.+++|+| ++..+++++.|+.|++|++...... ... ......+.+|...|.+++|+|++ ..++++
T Consensus 78 ~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~----~~~---~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~ 150 (402)
T 2aq5_A 78 CGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLV----LPL---REPVITLEGHTKRVGIVAWHPTAQNVLLSA 150 (402)
T ss_dssp CCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCS----SCB---CSCSEEEECCSSCEEEEEECSSBTTEEEEE
T ss_pred ecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCc----ccc---CCceEEecCCCCeEEEEEECcCCCCEEEEE
Confidence 37999999999999 8999999999999999999876300 000 01356778899999999999998 589999
Q ss_pred cCCCcEEEEeCCCCCChhhh
Q psy11100 89 DETGLIIVWMLYKCNDDDEW 108 (110)
Q Consensus 89 ~~~~~i~~w~~~~~~~~~~~ 108 (110)
+.|+.|++||+++++....+
T Consensus 151 ~~dg~i~iwd~~~~~~~~~~ 170 (402)
T 2aq5_A 151 GCDNVILVWDVGTGAAVLTL 170 (402)
T ss_dssp ETTSCEEEEETTTTEEEEEE
T ss_pred cCCCEEEEEECCCCCccEEE
Confidence 99999999999988765443
No 39
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.61 E-value=8.2e-15 Score=95.15 Aligned_cols=83 Identities=12% Similarity=0.228 Sum_probs=72.7
Q ss_pred cCCCCCceEEEEEec-CCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEe
Q psy11100 10 AIPNNTKVNCLAWHQ-NQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSS 88 (110)
Q Consensus 10 ~~~h~~~v~~~~~~p-~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 88 (110)
..+|...|.++.|+| ++..+++|+.|+.+++||+.... .....+.+|...|.+++|+|++..++++
T Consensus 201 ~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~-------------~~~~~~~~h~~~v~~v~~~p~~~~l~s~ 267 (380)
T 3iz6_a 201 PSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITS-------------RAVRTYHGHEGDINSVKFFPDGQRFGTG 267 (380)
T ss_dssp SSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTC-------------CCCEEECCCSSCCCEEEECTTSSEEEEE
T ss_pred CCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCC-------------cceEEECCcCCCeEEEEEecCCCeEEEE
Confidence 357999999999987 78999999999999999997432 1456788899999999999999999999
Q ss_pred cCCCcEEEEeCCCCCCh
Q psy11100 89 DETGLIIVWMLYKCNDD 105 (110)
Q Consensus 89 ~~~~~i~~w~~~~~~~~ 105 (110)
+.|++|++||++++..+
T Consensus 268 s~D~~i~lwd~~~~~~~ 284 (380)
T 3iz6_a 268 SDDGTCRLFDMRTGHQL 284 (380)
T ss_dssp CSSSCEEEEETTTTEEE
T ss_pred cCCCeEEEEECCCCcEE
Confidence 99999999999987644
No 40
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.61 E-value=9.5e-15 Score=99.98 Aligned_cols=83 Identities=14% Similarity=0.226 Sum_probs=73.9
Q ss_pred CCCCCceEEEEEecCCC-EEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEec
Q psy11100 11 IPNNTKVNCLAWHQNQG-WIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSD 89 (110)
Q Consensus 11 ~~h~~~v~~~~~~p~~~-~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 89 (110)
.+|...|.+++|+|++. .+++++.|+.+++||..... ....+.+|...|.+++|+|++..+++++
T Consensus 144 ~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~--------------~~~~l~~H~~~V~~v~fspdg~~las~s 209 (611)
T 1nr0_A 144 TGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFK--------------FKSTFGEHTKFVHSVRYNPDGSLFASTG 209 (611)
T ss_dssp CCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBE--------------EEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred cCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCe--------------EeeeeccccCceEEEEECCCCCEEEEEE
Confidence 47999999999999986 59999999999999987654 5677889999999999999999999999
Q ss_pred CCCcEEEEeCCCCCChhh
Q psy11100 90 ETGLIIVWMLYKCNDDDE 107 (110)
Q Consensus 90 ~~~~i~~w~~~~~~~~~~ 107 (110)
.|++|++||+.+++...+
T Consensus 210 ~D~~i~lwd~~~g~~~~~ 227 (611)
T 1nr0_A 210 GDGTIVLYNGVDGTKTGV 227 (611)
T ss_dssp TTSCEEEEETTTCCEEEE
T ss_pred CCCcEEEEECCCCcEeee
Confidence 999999999988765443
No 41
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.60 E-value=3e-14 Score=91.44 Aligned_cols=83 Identities=17% Similarity=0.293 Sum_probs=72.5
Q ss_pred cCCCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEec
Q psy11100 10 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSD 89 (110)
Q Consensus 10 ~~~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 89 (110)
..+|.+.|.+++|+|++++|++++.|+.+++||+.... .......+..|...|.+++|+|++..+++++
T Consensus 101 ~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~-----------~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s 169 (345)
T 3fm0_A 101 LEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEED-----------EYECVSVLNSHTQDVKHVVWHPSQELLASAS 169 (345)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTS-----------CEEEEEEECCCCSCEEEEEECSSSSCEEEEE
T ss_pred ccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCC-----------CeEEEEEecCcCCCeEEEEECCCCCEEEEEe
Confidence 44799999999999999999999999999999998653 1124556778999999999999999999999
Q ss_pred CCCcEEEEeCCCCC
Q psy11100 90 ETGLIIVWMLYKCN 103 (110)
Q Consensus 90 ~~~~i~~w~~~~~~ 103 (110)
.|+.|++||.+++.
T Consensus 170 ~d~~i~~w~~~~~~ 183 (345)
T 3fm0_A 170 YDDTVKLYREEEDD 183 (345)
T ss_dssp TTSCEEEEEEETTE
T ss_pred CCCcEEEEEecCCC
Confidence 99999999987764
No 42
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.60 E-value=8.3e-15 Score=98.74 Aligned_cols=73 Identities=22% Similarity=0.394 Sum_probs=67.0
Q ss_pred CCCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecC
Q psy11100 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE 90 (110)
Q Consensus 11 ~~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 90 (110)
.+|.+.|.+++|+|+|++|++++.|+.|++||.. +. .+..+.+|...|.+++|+|+++.|++++.
T Consensus 505 ~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~-~~--------------~~~~~~~h~~~v~~~~fs~dg~~l~s~~~ 569 (577)
T 2ymu_A 505 TGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQ--------------LLQTLTGHSSSVWGVAFSPDGQTIASASS 569 (577)
T ss_dssp ECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT-SC--------------EEEEEECCSSCEEEEEECTTSSCEEEEET
T ss_pred eCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCC-CC--------------EEEEEcCCCCCEEEEEEcCCCCEEEEEeC
Confidence 4799999999999999999999999999999964 33 56778899999999999999999999999
Q ss_pred CCcEEEEe
Q psy11100 91 TGLIIVWM 98 (110)
Q Consensus 91 ~~~i~~w~ 98 (110)
|++|++||
T Consensus 570 D~~i~~Wd 577 (577)
T 2ymu_A 570 DKTVKLWN 577 (577)
T ss_dssp TSCEEEEC
T ss_pred CCEEEEeC
Confidence 99999997
No 43
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.60 E-value=1.6e-14 Score=92.47 Aligned_cols=80 Identities=13% Similarity=0.160 Sum_probs=69.4
Q ss_pred CCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeee-EEeec-cCCCeEEEEEcCCCCeEEEec
Q psy11100 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMN-QSLQG-HSGKVRAIIWNEQYEKLTSSD 89 (110)
Q Consensus 12 ~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~v~~~~~s~~~~~l~s~~ 89 (110)
.|...+.+++|+|++.++++|+.|+.|++||+.... .. ..+.. |...|.+++|+|++..+++++
T Consensus 168 ~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~--------------~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~ 233 (343)
T 3lrv_A 168 KSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPD--------------QASSRFPVDEEAKIKEVKFADNGYWMVVEC 233 (343)
T ss_dssp CSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTT--------------SCCEECCCCTTSCEEEEEECTTSSEEEEEE
T ss_pred CCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCC--------------CCccEEeccCCCCEEEEEEeCCCCEEEEEe
Confidence 455689999999999999999999999999999876 33 45666 899999999999999999999
Q ss_pred CCCcEEEEeCCCCCChh
Q psy11100 90 ETGLIIVWMLYKCNDDD 106 (110)
Q Consensus 90 ~~~~i~~w~~~~~~~~~ 106 (110)
++.|++||+++++...
T Consensus 234 -~~~v~iwd~~~~~~~~ 249 (343)
T 3lrv_A 234 -DQTVVCFDLRKDVGTL 249 (343)
T ss_dssp -SSBEEEEETTSSTTCB
T ss_pred -CCeEEEEEcCCCCcce
Confidence 4599999999887653
No 44
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.59 E-value=1.4e-14 Score=105.00 Aligned_cols=85 Identities=18% Similarity=0.262 Sum_probs=77.4
Q ss_pred cCCCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEec
Q psy11100 10 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSD 89 (110)
Q Consensus 10 ~~~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 89 (110)
..+|.+.|.+++|+|+|+++++++.|+.+++||..... ....+.+|...|.+++|+|++..+++++
T Consensus 611 ~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~--------------~~~~~~~h~~~v~~~~~s~~~~~l~s~~ 676 (1249)
T 3sfz_A 611 VRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGE--------------KLLDIKAHEDEVLCCAFSSDDSYIATCS 676 (1249)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC--------------EEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred EecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCC--------------EEEEeccCCCCEEEEEEecCCCEEEEEe
Confidence 34799999999999999999999999999999999876 6678889999999999999999999999
Q ss_pred CCCcEEEEeCCCCCChhhh
Q psy11100 90 ETGLIIVWMLYKCNDDDEW 108 (110)
Q Consensus 90 ~~~~i~~w~~~~~~~~~~~ 108 (110)
.|+.|++||+.+++.+..+
T Consensus 677 ~d~~v~vwd~~~~~~~~~~ 695 (1249)
T 3sfz_A 677 ADKKVKIWDSATGKLVHTY 695 (1249)
T ss_dssp TTSEEEEEETTTCCEEEEE
T ss_pred CCCeEEEEECCCCceEEEE
Confidence 9999999999988765543
No 45
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.59 E-value=8.1e-15 Score=93.78 Aligned_cols=83 Identities=19% Similarity=0.310 Sum_probs=72.7
Q ss_pred ccCCCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCC--CCeEE
Q psy11100 9 IAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQ--YEKLT 86 (110)
Q Consensus 9 ~~~~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~ 86 (110)
+..+|.+.|.+++|+|+++++++++.|+.+++|++.... ......+..|...|.+++|+++ +..++
T Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~------------~~~~~~~~~h~~~v~~~~~~~~~~~~~l~ 73 (379)
T 3jrp_A 6 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGET------------HKLIDTLTGHEGPVWRVDWAHPKFGTILA 73 (379)
T ss_dssp CEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTE------------EEEEEEECCCSSCEEEEEECCGGGCSEEE
T ss_pred EecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCc------------ceeeeEecCCCCcEEEEEeCCCCCCCEEE
Confidence 445899999999999999999999999999999998432 1145677889999999999987 89999
Q ss_pred EecCCCcEEEEeCCCCC
Q psy11100 87 SSDETGLIIVWMLYKCN 103 (110)
Q Consensus 87 s~~~~~~i~~w~~~~~~ 103 (110)
+++.|+.|++||+.+++
T Consensus 74 s~~~dg~v~iwd~~~~~ 90 (379)
T 3jrp_A 74 SCSYDGKVLIWKEENGR 90 (379)
T ss_dssp EEETTSCEEEEEEETTE
T ss_pred EeccCCEEEEEEcCCCc
Confidence 99999999999998875
No 46
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.59 E-value=2.6e-14 Score=98.85 Aligned_cols=80 Identities=16% Similarity=0.255 Sum_probs=72.8
Q ss_pred ccCCCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEe
Q psy11100 9 IAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSS 88 (110)
Q Consensus 9 ~~~~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 88 (110)
...+|...|.+++|+|+++++++++.|+.|++||+.... ....+.+|...|.+++|+|++..++++
T Consensus 425 ~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~--------------~~~~~~~h~~~v~~~~~s~~~~~l~s~ 490 (694)
T 3dm0_A 425 RLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGV--------------STRRFVGHTKDVLSVAFSLDNRQIVSA 490 (694)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE--------------EEEEEECCSSCEEEEEECTTSSCEEEE
T ss_pred eecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCc--------------ceeEEeCCCCCEEEEEEeCCCCEEEEE
Confidence 345899999999999999999999999999999999876 567788999999999999999999999
Q ss_pred cCCCcEEEEeCCCC
Q psy11100 89 DETGLIIVWMLYKC 102 (110)
Q Consensus 89 ~~~~~i~~w~~~~~ 102 (110)
+.|++|++||....
T Consensus 491 s~D~~i~iwd~~~~ 504 (694)
T 3dm0_A 491 SRDRTIKLWNTLGE 504 (694)
T ss_dssp ETTSCEEEECTTSC
T ss_pred eCCCEEEEEECCCC
Confidence 99999999997543
No 47
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.59 E-value=8e-15 Score=102.17 Aligned_cols=87 Identities=15% Similarity=0.161 Sum_probs=78.0
Q ss_pred eccCCCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEE
Q psy11100 8 KIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTS 87 (110)
Q Consensus 8 ~~~~~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s 87 (110)
+...+|.+.|.+++|+|+++++++++.+|.|++||...+. ....+..|...|.+++|+|++..+++
T Consensus 7 ~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~--------------~~~~~~~~~~~v~~~~~s~~~~~l~~ 72 (814)
T 3mkq_A 7 KTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQV--------------EVRSIQVTETPVRAGKFIARKNWIIV 72 (814)
T ss_dssp EEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE--------------EEEEEECCSSCEEEEEEEGGGTEEEE
T ss_pred eeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCc--------------eEEEEecCCCcEEEEEEeCCCCEEEE
Confidence 3446799999999999999999999999999999998876 56778889999999999999999999
Q ss_pred ecCCCcEEEEeCCCCCChhhh
Q psy11100 88 SDETGLIIVWMLYKCNDDDEW 108 (110)
Q Consensus 88 ~~~~~~i~~w~~~~~~~~~~~ 108 (110)
++.|+.|++||+.+++.+.++
T Consensus 73 ~~~dg~i~vw~~~~~~~~~~~ 93 (814)
T 3mkq_A 73 GSDDFRIRVFNYNTGEKVVDF 93 (814)
T ss_dssp EETTSEEEEEETTTCCEEEEE
T ss_pred EeCCCeEEEEECCCCcEEEEE
Confidence 999999999999988765543
No 48
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.59 E-value=2.5e-14 Score=91.13 Aligned_cols=83 Identities=16% Similarity=0.242 Sum_probs=73.7
Q ss_pred CCCCceEEEEEec-CCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEe---eccCCCeEEEEEcCCCCeEEE
Q psy11100 12 PNNTKVNCLAWHQ-NQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSL---QGHSGKVRAIIWNEQYEKLTS 87 (110)
Q Consensus 12 ~h~~~v~~~~~~p-~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~s~~~~~l~s 87 (110)
+|...|.+++|+| ++..+++++.|+.|++||+.... ....+ ..|...|.+++|+|++..+++
T Consensus 113 ~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~--------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 178 (366)
T 3k26_A 113 GHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDT--------------LVAIFGGVEGHRDEVLSADYDLLGEKIMS 178 (366)
T ss_dssp SCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTE--------------EEEEECSTTSCSSCEEEEEECTTSSEEEE
T ss_pred CCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCe--------------EEEEecccccccCceeEEEECCCCCEEEE
Confidence 6999999999999 89999999999999999998775 44555 578899999999999999999
Q ss_pred ecCCCcEEEEeCCCCCChhhh
Q psy11100 88 SDETGLIIVWMLYKCNDDDEW 108 (110)
Q Consensus 88 ~~~~~~i~~w~~~~~~~~~~~ 108 (110)
++.|+.|++||+++++....+
T Consensus 179 ~~~dg~i~i~d~~~~~~~~~~ 199 (366)
T 3k26_A 179 CGMDHSLKLWRINSKRMMNAI 199 (366)
T ss_dssp EETTSCEEEEESCSHHHHHHH
T ss_pred ecCCCCEEEEECCCCcccccc
Confidence 999999999999987665544
No 49
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.59 E-value=2.4e-14 Score=90.58 Aligned_cols=94 Identities=18% Similarity=0.305 Sum_probs=67.2
Q ss_pred cCCCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcC-----Cc---cc-ccc---------cce--------eee
Q psy11100 10 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKEST-----GQ---VA-AAN---------VNL--------AMN 63 (110)
Q Consensus 10 ~~~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~-----~~---~~-~~~---------~~~--------~~~ 63 (110)
..+|.+.|.+++|+|+++++++++.|+.+++||+....... .. .. .+. ..+ ...
T Consensus 211 ~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~ 290 (340)
T 4aow_A 211 HIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIV 290 (340)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEE
T ss_pred ecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCCCceeeccCCCEEEEEECCCCeEE
Confidence 34799999999999999999999999999999987653110 00 00 000 000 001
Q ss_pred ---------EEeeccCCCeEEEEEcCCCCeEEEecCCCcEEEEeCCCCC
Q psy11100 64 ---------QSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYKCN 103 (110)
Q Consensus 64 ---------~~~~~~~~~v~~~~~s~~~~~l~s~~~~~~i~~w~~~~~~ 103 (110)
.....|...|.+++|+|+++.|++++.|+.|++||+++|.
T Consensus 291 ~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 291 DELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred EeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 1123467789999999999999999999999999999885
No 50
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.58 E-value=3.2e-14 Score=91.07 Aligned_cols=84 Identities=10% Similarity=0.116 Sum_probs=70.8
Q ss_pred eccCCCCCceEEEEEec--CCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEe-eccCCCeEEEEEcCCCCe
Q psy11100 8 KIAIPNNTKVNCLAWHQ--NQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSL-QGHSGKVRAIIWNEQYEK 84 (110)
Q Consensus 8 ~~~~~h~~~v~~~~~~p--~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~ 84 (110)
.+..+|.+.|.+++|+| +++++++++.|+.+++||+.... ..... ..+...+.+++|+|++..
T Consensus 119 ~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~--------------~~~~~~~~~~~~i~~~~~~pdg~~ 184 (343)
T 3lrv_A 119 EIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDS--------------QYIVHSAKSDVEYSSGVLHKDSLL 184 (343)
T ss_dssp EEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSC--------------EEEEECCCSSCCCCEEEECTTSCE
T ss_pred EeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCc--------------EEEEEecCCCCceEEEEECCCCCE
Confidence 34457778999999999 99999999999999999999876 33333 334557999999999999
Q ss_pred EEEecCCCcEEEEeCCCCCCh
Q psy11100 85 LTSSDETGLIIVWMLYKCNDD 105 (110)
Q Consensus 85 l~s~~~~~~i~~w~~~~~~~~ 105 (110)
+++++.|+.|++||+++++..
T Consensus 185 lasg~~dg~i~iwd~~~~~~~ 205 (343)
T 3lrv_A 185 LALYSPDGILDVYNLSSPDQA 205 (343)
T ss_dssp EEEECTTSCEEEEESSCTTSC
T ss_pred EEEEcCCCEEEEEECCCCCCC
Confidence 999999999999999988765
No 51
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.58 E-value=4.2e-14 Score=91.19 Aligned_cols=81 Identities=16% Similarity=0.146 Sum_probs=72.3
Q ss_pred eccCCCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEE
Q psy11100 8 KIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTS 87 (110)
Q Consensus 8 ~~~~~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s 87 (110)
....+|.+.|.+++|+|+++.+++++.|+.+++||..... ....+..|...|.+++|+|++..+++
T Consensus 58 ~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~--------------~~~~~~~~~~~v~~~~~sp~g~~las 123 (354)
T 2pbi_B 58 RTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTN--------------KEHAVTMPCTWVMACAYAPSGCAIAC 123 (354)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC--------------EEEEEECSSSCCCEEEECTTSSEEEE
T ss_pred EEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCC--------------cceEEecCCCCEEEEEECCCCCEEEE
Confidence 3445899999999999999999999999999999998776 45667778889999999999999999
Q ss_pred ecCCCcEEEEeCCCC
Q psy11100 88 SDETGLIIVWMLYKC 102 (110)
Q Consensus 88 ~~~~~~i~~w~~~~~ 102 (110)
++.|+.+.+|++...
T Consensus 124 g~~d~~i~v~~~~~~ 138 (354)
T 2pbi_B 124 GGLDNKCSVYPLTFD 138 (354)
T ss_dssp ESTTSEEEEEECCCC
T ss_pred eeCCCCEEEEEEecc
Confidence 999999999998654
No 52
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.58 E-value=2.9e-14 Score=91.92 Aligned_cols=82 Identities=15% Similarity=0.226 Sum_probs=74.0
Q ss_pred CCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcC--CCCeEEEec
Q psy11100 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNE--QYEKLTSSD 89 (110)
Q Consensus 12 ~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--~~~~l~s~~ 89 (110)
+|.+.|.+++|+|++..+++++.|+.+++||+..+. ....+.+|...|.+++|+| ++..+++++
T Consensus 152 ~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~--------------~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs 217 (354)
T 2pbi_B 152 MHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQ--------------LLQSFHGHGADVLCLDLAPSETGNTFVSGG 217 (354)
T ss_dssp ECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCC--------------EEEEEECCSSCEEEEEECCCSSCCEEEEEE
T ss_pred ccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCe--------------EEEEEcCCCCCeEEEEEEeCCCCCEEEEEe
Confidence 689999999999999999999999999999999876 6778889999999999987 467899999
Q ss_pred CCCcEEEEeCCCCCChhh
Q psy11100 90 ETGLIIVWMLYKCNDDDE 107 (110)
Q Consensus 90 ~~~~i~~w~~~~~~~~~~ 107 (110)
.|+.|++||+++++.+..
T Consensus 218 ~Dg~v~~wd~~~~~~~~~ 235 (354)
T 2pbi_B 218 CDKKAMVWDMRSGQCVQA 235 (354)
T ss_dssp TTSCEEEEETTTCCEEEE
T ss_pred CCCeEEEEECCCCcEEEE
Confidence 999999999998876543
No 53
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.58 E-value=1.7e-14 Score=93.98 Aligned_cols=84 Identities=19% Similarity=0.240 Sum_probs=74.6
Q ss_pred CCCCCceEEEEEecCC-CEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEe--eccCCCeEEEEEcCCCCeEEE
Q psy11100 11 IPNNTKVNCLAWHQNQ-GWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSL--QGHSGKVRAIIWNEQYEKLTS 87 (110)
Q Consensus 11 ~~h~~~v~~~~~~p~~-~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~s 87 (110)
.+|...|.+++|+|++ ..+++++.|+.+++||+.... ....+ ..|...|.+++|+|++..+++
T Consensus 128 ~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~--------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 193 (402)
T 2aq5_A 128 EGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGA--------------AVLTLGPDVHPDTIYSVDWSRDGALICT 193 (402)
T ss_dssp ECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTE--------------EEEEECTTTCCSCEEEEEECTTSSCEEE
T ss_pred cCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCC--------------ccEEEecCCCCCceEEEEECCCCCEEEE
Confidence 3799999999999997 699999999999999999876 55667 678999999999999999999
Q ss_pred ecCCCcEEEEeCCCCCChhhh
Q psy11100 88 SDETGLIIVWMLYKCNDDDEW 108 (110)
Q Consensus 88 ~~~~~~i~~w~~~~~~~~~~~ 108 (110)
++.|+.|++||+++++.+.++
T Consensus 194 ~~~d~~i~iwd~~~~~~~~~~ 214 (402)
T 2aq5_A 194 SCRDKRVRVIEPRKGTVVAEK 214 (402)
T ss_dssp EETTSEEEEEETTTTEEEEEE
T ss_pred EecCCcEEEEeCCCCceeeee
Confidence 999999999999987765443
No 54
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.58 E-value=5.6e-14 Score=88.19 Aligned_cols=77 Identities=16% Similarity=0.276 Sum_probs=67.8
Q ss_pred CCCCceEEEEEecCCCEEEEE--ecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEec
Q psy11100 12 PNNTKVNCLAWHQNQGWIAVG--GDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSD 89 (110)
Q Consensus 12 ~h~~~v~~~~~~p~~~~l~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 89 (110)
.+...+..+.|+|++..++++ +.|+.+++||+.... .+..+.+|.+.|.+++|+|++..|++++
T Consensus 238 ~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~--------------~~~~l~gH~~~V~~l~~spdg~~l~S~s 303 (318)
T 4ggc_A 238 DAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA--------------KVAELKGHTSRVLSLTMSPDGATVASAA 303 (318)
T ss_dssp ECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC--------------EEEEECCCSSCEEEEEECTTSSCEEEEE
T ss_pred cceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCc--------------EEEEEcCCCCCEEEEEEcCCCCEEEEEe
Confidence 456788999999998876654 478999999999876 6788999999999999999999999999
Q ss_pred CCCcEEEEeCCCC
Q psy11100 90 ETGLIIVWMLYKC 102 (110)
Q Consensus 90 ~~~~i~~w~~~~~ 102 (110)
.|++|++||+.+.
T Consensus 304 ~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 304 ADETLRLWRCFEL 316 (318)
T ss_dssp TTTEEEEECCSCC
T ss_pred cCCeEEEEECCCC
Confidence 9999999998753
No 55
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.56 E-value=9e-14 Score=91.18 Aligned_cols=77 Identities=16% Similarity=0.305 Sum_probs=67.7
Q ss_pred CCCceEEEEEecCCCEEEEEe--cCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecC
Q psy11100 13 NNTKVNCLAWHQNQGWIAVGG--DDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE 90 (110)
Q Consensus 13 h~~~v~~~~~~p~~~~l~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 90 (110)
+...+.++.|+|++..+++++ .|+.|++||..... .+..+.+|.+.|.+++|+|+|..|++++.
T Consensus 319 ~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~--------------~v~~l~gH~~~V~~l~~spdg~~l~S~s~ 384 (420)
T 4gga_A 319 AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA--------------KVAELKGHTSRVLSLTMSPDGATVASAAA 384 (420)
T ss_dssp CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC--------------EEEEECCCSSCEEEEEECTTSSCEEEEET
T ss_pred cccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCc--------------EEEEEcCCCCCEEEEEEcCCCCEEEEEec
Confidence 446788999999998877654 78999999999876 67888999999999999999999999999
Q ss_pred CCcEEEEeCCCCC
Q psy11100 91 TGLIIVWMLYKCN 103 (110)
Q Consensus 91 ~~~i~~w~~~~~~ 103 (110)
|++|++||+....
T Consensus 385 D~tvriWdv~~~~ 397 (420)
T 4gga_A 385 DETLRLWRCFELD 397 (420)
T ss_dssp TTEEEEECCSCSS
T ss_pred CCeEEEEECCCCC
Confidence 9999999987543
No 56
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.56 E-value=3.9e-14 Score=92.36 Aligned_cols=95 Identities=13% Similarity=0.135 Sum_probs=71.8
Q ss_pred CCCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecC
Q psy11100 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE 90 (110)
Q Consensus 11 ~~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 90 (110)
.+|...|.+++|+|+++.+++++.|+.+++||+......... ...........+.+|...|.+++|+|++..+++++.
T Consensus 253 ~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~--~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~ 330 (393)
T 1erj_A 253 TGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDS--KTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSK 330 (393)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-----------------CEEEEEECCSSCEEEEEECGGGCEEEEEET
T ss_pred CCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccc--cCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeC
Confidence 478899999999999999999999999999999764310000 000111134567789999999999999999999999
Q ss_pred CCcEEEEeCCCCCChhh
Q psy11100 91 TGLIIVWMLYKCNDDDE 107 (110)
Q Consensus 91 ~~~i~~w~~~~~~~~~~ 107 (110)
|+.|++||+.+++.+..
T Consensus 331 D~~v~iwd~~~~~~~~~ 347 (393)
T 1erj_A 331 DRGVLFWDKKSGNPLLM 347 (393)
T ss_dssp TSEEEEEETTTCCEEEE
T ss_pred CCeEEEEECCCCeEEEE
Confidence 99999999998876543
No 57
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.56 E-value=3e-14 Score=101.49 Aligned_cols=92 Identities=11% Similarity=0.056 Sum_probs=72.8
Q ss_pred CCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCC-------c--C---------------C-------cccccccce
Q psy11100 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKE-------S--T---------------G-------QVAAANVNL 60 (110)
Q Consensus 12 ~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~-------~--~---------------~-------~~~~~~~~~ 60 (110)
+|...|.+++|+|+++.|++|+.|+.|++|++..... . . . ........+
T Consensus 486 ~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 565 (902)
T 2oaj_A 486 AKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGF 565 (902)
T ss_dssp SSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEE
T ss_pred CCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCcc
Confidence 7889999999999999999999999999999975420 0 0 0 000001123
Q ss_pred eeeEEeeccCCCeEEEEEcCCCCeEEEecCCCcEEEEeCCCCCC
Q psy11100 61 AMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYKCND 104 (110)
Q Consensus 61 ~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~~~i~~w~~~~~~~ 104 (110)
+++..+..|.+.|.+++|||+| +|++++.|++|++||++++..
T Consensus 566 ~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~ 608 (902)
T 2oaj_A 566 MPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAI 608 (902)
T ss_dssp EEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEE
T ss_pred ceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeE
Confidence 4567788899999999999999 999999999999999877654
No 58
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.55 E-value=4e-14 Score=93.84 Aligned_cols=78 Identities=15% Similarity=0.264 Sum_probs=68.8
Q ss_pred ccCCCCCceEEEEEecC-CCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEE
Q psy11100 9 IAIPNNTKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTS 87 (110)
Q Consensus 9 ~~~~h~~~v~~~~~~p~-~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s 87 (110)
...+|.+.|.+++|+|+ +..+++++.|+.+++||+.... .......|...|.+++|+|+|..|++
T Consensus 144 ~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~--------------~~~~~~~~~~~v~~v~wspdg~~las 209 (434)
T 2oit_A 144 LLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETV--------------KVCATLPSTVAVTSVCWSPKGKQLAV 209 (434)
T ss_dssp CCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSE--------------EEEEEECGGGCEEEEEECTTSSCEEE
T ss_pred ccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCc--------------ceeeccCCCCceeEEEEcCCCCEEEE
Confidence 34468899999999998 8899999999999999998765 34445668889999999999999999
Q ss_pred ecCCCcEEEEeCC
Q psy11100 88 SDETGLIIVWMLY 100 (110)
Q Consensus 88 ~~~~~~i~~w~~~ 100 (110)
++.|+.|++||++
T Consensus 210 gs~dg~v~iwd~~ 222 (434)
T 2oit_A 210 GKQNGTVVQYLPT 222 (434)
T ss_dssp EETTSCEEEECTT
T ss_pred EcCCCcEEEEccC
Confidence 9999999999988
No 59
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.55 E-value=6.9e-14 Score=89.09 Aligned_cols=82 Identities=15% Similarity=0.270 Sum_probs=73.1
Q ss_pred CCCCceEEEEEecC----CCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcC-CCCeEE
Q psy11100 12 PNNTKVNCLAWHQN----QGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNE-QYEKLT 86 (110)
Q Consensus 12 ~h~~~v~~~~~~p~----~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~ 86 (110)
.|...|.+++|+|+ +.++++++.|+.+++||+.... ....+..|...|.+++|+| ++..++
T Consensus 67 ~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~--------------~~~~~~~~~~~i~~~~~~~~~~~~l~ 132 (366)
T 3k26_A 67 DADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQ--------------CIKHYVGHGNAINELKFHPRDPNLLL 132 (366)
T ss_dssp CTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCC--------------EEEEEESCCSCEEEEEECSSCTTEEE
T ss_pred CCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhce--------------EeeeecCCCCcEEEEEECCCCCCEEE
Confidence 37788999999998 6789999999999999998876 5677888999999999999 899999
Q ss_pred EecCCCcEEEEeCCCCCChhh
Q psy11100 87 SSDETGLIIVWMLYKCNDDDE 107 (110)
Q Consensus 87 s~~~~~~i~~w~~~~~~~~~~ 107 (110)
+++.|+.|++||+++++....
T Consensus 133 s~~~dg~i~iwd~~~~~~~~~ 153 (366)
T 3k26_A 133 SVSKDHALRLWNIQTDTLVAI 153 (366)
T ss_dssp EEETTSCEEEEETTTTEEEEE
T ss_pred EEeCCCeEEEEEeecCeEEEE
Confidence 999999999999998766544
No 60
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.55 E-value=5.6e-14 Score=89.47 Aligned_cols=84 Identities=14% Similarity=0.216 Sum_probs=73.4
Q ss_pred cCCCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEE--cCCCCeEEE
Q psy11100 10 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIW--NEQYEKLTS 87 (110)
Q Consensus 10 ~~~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--s~~~~~l~s 87 (110)
..+|.+.|.+++|+|+++.+++++.|+.+++||+.... . .....|...|.+++| +|++..+++
T Consensus 82 ~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~--------------~-~~~~~~~~~v~~~~~~~~~~~~~l~~ 146 (368)
T 3mmy_A 82 QQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQ--------------A-IQIAQHDAPVKTIHWIKAPNYSCVMT 146 (368)
T ss_dssp EEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE--------------E-EEEEECSSCEEEEEEEECSSCEEEEE
T ss_pred eccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCC--------------c-eeeccccCceEEEEEEeCCCCCEEEE
Confidence 34799999999999999999999999999999999775 2 335668899999999 899999999
Q ss_pred ecCCCcEEEEeCCCCCChhhh
Q psy11100 88 SDETGLIIVWMLYKCNDDDEW 108 (110)
Q Consensus 88 ~~~~~~i~~w~~~~~~~~~~~ 108 (110)
++.|+.|++||+++++.+..+
T Consensus 147 ~~~dg~i~vwd~~~~~~~~~~ 167 (368)
T 3mmy_A 147 GSWDKTLKFWDTRSSNPMMVL 167 (368)
T ss_dssp EETTSEEEEECSSCSSCSEEE
T ss_pred ccCCCcEEEEECCCCcEEEEE
Confidence 999999999999988765443
No 61
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.55 E-value=1.3e-13 Score=88.24 Aligned_cols=101 Identities=14% Similarity=0.093 Sum_probs=76.0
Q ss_pred eeccCCCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcc----cccccceeeeEEeeccCCCeEEEEEcCCC
Q psy11100 7 KKIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQV----AAANVNLAMNQSLQGHSGKVRAIIWNEQY 82 (110)
Q Consensus 7 ~~~~~~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 82 (110)
+.+..+|...|.+++|+|++..+++++.|+.+++||+.......... ............+..|...+.+++|+|++
T Consensus 135 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 214 (372)
T 1k8k_C 135 KHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANG 214 (372)
T ss_dssp EEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSS
T ss_pred eeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCC
Confidence 34456789999999999999999999999999999975321100000 00000112456677888999999999999
Q ss_pred CeEEEecCCCcEEEEeCCCCCChhh
Q psy11100 83 EKLTSSDETGLIIVWMLYKCNDDDE 107 (110)
Q Consensus 83 ~~l~s~~~~~~i~~w~~~~~~~~~~ 107 (110)
..+++++.|+.|++||+++++.+.+
T Consensus 215 ~~l~~~~~d~~i~i~d~~~~~~~~~ 239 (372)
T 1k8k_C 215 SRVAWVSHDSTVCLADADKKMAVAT 239 (372)
T ss_dssp SEEEEEETTTEEEEEEGGGTTEEEE
T ss_pred CEEEEEeCCCEEEEEECCCCceeEE
Confidence 9999999999999999998876544
No 62
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.54 E-value=6.6e-14 Score=96.87 Aligned_cols=83 Identities=22% Similarity=0.325 Sum_probs=74.4
Q ss_pred CCCCCceEEEEEecCC--CEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEe
Q psy11100 11 IPNNTKVNCLAWHQNQ--GWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSS 88 (110)
Q Consensus 11 ~~h~~~v~~~~~~p~~--~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 88 (110)
.+|...|.+++|+|++ ..+++++.|+.|++||+.... ....+.+|...|.+++|+|++..++++
T Consensus 514 ~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~--------------~~~~~~~h~~~v~~v~~spdg~~l~sg 579 (694)
T 3dm0_A 514 EGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCK--------------LRSTLAGHTGYVSTVAVSPDGSLCASG 579 (694)
T ss_dssp TSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCC--------------EEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred CCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCc--------------EEEEEcCCCCCEEEEEEeCCCCEEEEE
Confidence 3688899999999986 579999999999999998876 567788999999999999999999999
Q ss_pred cCCCcEEEEeCCCCCChhh
Q psy11100 89 DETGLIIVWMLYKCNDDDE 107 (110)
Q Consensus 89 ~~~~~i~~w~~~~~~~~~~ 107 (110)
+.|+.|++||+++++.+..
T Consensus 580 ~~Dg~i~iwd~~~~~~~~~ 598 (694)
T 3dm0_A 580 GKDGVVLLWDLAEGKKLYS 598 (694)
T ss_dssp ETTSBCEEEETTTTEEEEC
T ss_pred eCCCeEEEEECCCCceEEE
Confidence 9999999999998876543
No 63
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.54 E-value=9.8e-14 Score=89.62 Aligned_cols=77 Identities=16% Similarity=0.089 Sum_probs=68.5
Q ss_pred CCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEee------cc---------------CC
Q psy11100 13 NNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQ------GH---------------SG 71 (110)
Q Consensus 13 h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~---------------~~ 71 (110)
|.+.|.+++|+|+++++++++.|+.+++||+.... ....+. .| ..
T Consensus 290 ~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~--------------~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 355 (397)
T 1sq9_A 290 HSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKE--------------RITTLNMHCDDIEIEEDILAVDEHGDSLAEP 355 (397)
T ss_dssp BSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE--------------EEEEEECCGGGCSSGGGCCCBCTTSCBCSSC
T ss_pred cCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCc--------------eeEEEecccCcccchhhhhccccccccccCC
Confidence 88999999999999999999999999999998875 556666 66 88
Q ss_pred CeEEEEEcCCC----------CeEEEecCCCcEEEEeCCCCC
Q psy11100 72 KVRAIIWNEQY----------EKLTSSDETGLIIVWMLYKCN 103 (110)
Q Consensus 72 ~v~~~~~s~~~----------~~l~s~~~~~~i~~w~~~~~~ 103 (110)
.|.+++|+|++ ..+++++.|+.|++|++.+|+
T Consensus 356 ~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 356 GVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp CEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred ceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 99999999998 789999999999999998864
No 64
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.54 E-value=1.3e-13 Score=86.86 Aligned_cols=82 Identities=17% Similarity=0.204 Sum_probs=69.4
Q ss_pred cCCCCCceEEEEEec--CCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCC--CCeE
Q psy11100 10 AIPNNTKVNCLAWHQ--NQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQ--YEKL 85 (110)
Q Consensus 10 ~~~h~~~v~~~~~~p--~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l 85 (110)
..+|.+.|.+++|+| +++.|++++.|+.+++||+..+. +.....+..|...|.+++|+|+ +..+
T Consensus 49 l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~------------~~~~~~~~~h~~~v~~v~~~p~~~g~~l 116 (297)
T 2pm7_B 49 LTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGR------------WSQIAVHAVHSASVNSVQWAPHEYGPML 116 (297)
T ss_dssp ECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSC------------BCCCEEECCCSSCEEEEEECCGGGCSEE
T ss_pred EccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCc------------eEEEEEeecCCCceeEEEeCcCCCCcEE
Confidence 348999999999976 38999999999999999998653 0134556778999999999997 8899
Q ss_pred EEecCCCcEEEEeCCCCC
Q psy11100 86 TSSDETGLIIVWMLYKCN 103 (110)
Q Consensus 86 ~s~~~~~~i~~w~~~~~~ 103 (110)
++++.|+.|++||++++.
T Consensus 117 ~s~s~d~~v~~wd~~~~~ 134 (297)
T 2pm7_B 117 LVASSDGKVSVVEFKENG 134 (297)
T ss_dssp EEEETTSEEEEEEBCSSS
T ss_pred EEEECCCcEEEEEecCCC
Confidence 999999999999998753
No 65
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.54 E-value=3e-14 Score=91.67 Aligned_cols=95 Identities=16% Similarity=0.129 Sum_probs=71.2
Q ss_pred ccCCCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCccc----ccccceeeeEEeeccCCCeEEEEEcCCCCe
Q psy11100 9 IAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVA----AANVNLAMNQSLQGHSGKVRAIIWNEQYEK 84 (110)
Q Consensus 9 ~~~~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 84 (110)
+..+|.+.|.+++|+|+++.+++++.|+.+++||+........... ...........+ .|...|.+++|+|++..
T Consensus 141 ~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~ 219 (377)
T 3dwl_C 141 LKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNA 219 (377)
T ss_dssp ECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSC
T ss_pred eecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCE
Confidence 3334999999999999999999999999999999864321100000 000111233444 88899999999999999
Q ss_pred EEEecCCCcEEEEeCCCCCC
Q psy11100 85 LTSSDETGLIIVWMLYKCND 104 (110)
Q Consensus 85 l~s~~~~~~i~~w~~~~~~~ 104 (110)
+++++.|+.|++||+.++..
T Consensus 220 l~~~~~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 220 LAYAGHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp EEEEETTTEEC-CEECSTTS
T ss_pred EEEEeCCCcEEEEECCCCCC
Confidence 99999999999999998876
No 66
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.53 E-value=2.6e-13 Score=84.87 Aligned_cols=81 Identities=12% Similarity=0.133 Sum_probs=72.0
Q ss_pred eccCCCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEE
Q psy11100 8 KIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTS 87 (110)
Q Consensus 8 ~~~~~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s 87 (110)
....+|.+.|.+++| |++..+++++.||.+++||+.... ....+..|...|.+++|+|++..+++
T Consensus 12 ~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~--------------~~~~~~~~~~~v~~~~~~~~~~~l~~ 76 (313)
T 3odt_A 12 ATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQW--------------LGTVVYTGQGFLNSVCYDSEKELLLF 76 (313)
T ss_dssp EEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSE--------------EEEEEEECSSCEEEEEEETTTTEEEE
T ss_pred HHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCE--------------EEEEeecCCccEEEEEECCCCCEEEE
Confidence 344589999999999 999999999999999999998765 55677788999999999999999999
Q ss_pred ecCCCcEEEEeCCCCC
Q psy11100 88 SDETGLIIVWMLYKCN 103 (110)
Q Consensus 88 ~~~~~~i~~w~~~~~~ 103 (110)
++.++.+++|++....
T Consensus 77 ~~~dg~i~~~~~~~~~ 92 (313)
T 3odt_A 77 GGKDTMINGVPLFATS 92 (313)
T ss_dssp EETTSCEEEEETTCCT
T ss_pred ecCCCeEEEEEeeecC
Confidence 9999999999987653
No 67
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.53 E-value=6.5e-14 Score=95.45 Aligned_cols=78 Identities=18% Similarity=0.271 Sum_probs=66.2
Q ss_pred ccCCCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCC-----CeEEEEEcCCCC
Q psy11100 9 IAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSG-----KVRAIIWNEQYE 83 (110)
Q Consensus 9 ~~~~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~v~~~~~s~~~~ 83 (110)
+..+|...|.+++|+|+|..|++++.||.+++|+... .+..+. |.. .+.+++|||+|+
T Consensus 80 ~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~----------------~l~~l~-~~~~~~~~sv~svafSPDG~ 142 (588)
T 2j04_A 80 LNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK----------------MLTNLD-SKGNLSSRTYHCFEWNPIES 142 (588)
T ss_dssp STTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE----------------EEEECC-CSSCSTTTCEEEEEECSSSS
T ss_pred eecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc----------------eeeecc-CCCccccccEEEEEEcCCCC
Confidence 3446788999999999999999999999999999543 233444 443 599999999999
Q ss_pred eEEEecCCCcEEEEeCCCCC
Q psy11100 84 KLTSSDETGLIIVWMLYKCN 103 (110)
Q Consensus 84 ~l~s~~~~~~i~~w~~~~~~ 103 (110)
.|++++.||+|++||+.++.
T Consensus 143 ~LAsgs~DGtVkIWd~~~~~ 162 (588)
T 2j04_A 143 SIVVGNEDGELQFFSIRKNS 162 (588)
T ss_dssp CEEEEETTSEEEEEECCCCT
T ss_pred EEEEEcCCCEEEEEECCCCc
Confidence 99999999999999999875
No 68
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.53 E-value=1.5e-13 Score=92.86 Aligned_cols=83 Identities=16% Similarity=0.262 Sum_probs=73.8
Q ss_pred cCCCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeec-cCCCeEEEEEcC--------
Q psy11100 10 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQG-HSGKVRAIIWNE-------- 80 (110)
Q Consensus 10 ~~~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~-------- 80 (110)
..+|...|.+++|+|+++++++++.|+.+++|++.... ....+.. |...|.+++|+|
T Consensus 484 ~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~--------------~~~~~~~~h~~~v~~~~~sp~~~~~~~~ 549 (615)
T 1pgu_A 484 KTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSRE--------------VKTSRWAFRTSKINAISWKPAEKGANEE 549 (615)
T ss_dssp SSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE--------------EEECCSCCCSSCEEEEEECCCC------
T ss_pred cCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCc--------------ceeEeecCCCCceeEEEEcCcccccccc
Confidence 44788999999999999999999999999999999876 5566666 899999999999
Q ss_pred --CCCeEEEecCCCcEEEEeCCCC-CChh
Q psy11100 81 --QYEKLTSSDETGLIIVWMLYKC-NDDD 106 (110)
Q Consensus 81 --~~~~l~s~~~~~~i~~w~~~~~-~~~~ 106 (110)
++..+++++.|+.|++||+.++ +.+.
T Consensus 550 ~~~~~~l~~~~~dg~i~iw~~~~~~~~~~ 578 (615)
T 1pgu_A 550 EIEEDLVATGSLDTNIFIYSVKRPMKIIK 578 (615)
T ss_dssp CCSCCEEEEEETTSCEEEEESSCTTCCEE
T ss_pred ccCCCEEEEEcCCCcEEEEECCCCceech
Confidence 9999999999999999999987 4443
No 69
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.53 E-value=9.6e-14 Score=89.55 Aligned_cols=98 Identities=18% Similarity=0.254 Sum_probs=71.4
Q ss_pred eccCCCCCceEEEEEec-CCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcC-CCCeE
Q psy11100 8 KIAIPNNTKVNCLAWHQ-NQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNE-QYEKL 85 (110)
Q Consensus 8 ~~~~~h~~~v~~~~~~p-~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l 85 (110)
.+..+|.+.|.+++|+| +++++++++.||.+++|++............. ...........|...|.+++|+| ++..+
T Consensus 37 ~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 115 (408)
T 4a11_B 37 DVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKA-VCSIGRDHPDVHRYSVETVQWYPHDTGMF 115 (408)
T ss_dssp EECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECE-EEEECTTCTTCCSSCEEEEEECTTCTTCE
T ss_pred eeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccc-cccccccccccCCCcEEEEEEccCCCcEE
Confidence 34557999999999999 99999999999999999998765110000000 00000001124889999999999 67789
Q ss_pred EEecCCCcEEEEeCCCCCChh
Q psy11100 86 TSSDETGLIIVWMLYKCNDDD 106 (110)
Q Consensus 86 ~s~~~~~~i~~w~~~~~~~~~ 106 (110)
++++.|+.|++||+.+++...
T Consensus 116 ~s~~~d~~i~iwd~~~~~~~~ 136 (408)
T 4a11_B 116 TSSSFDKTLKVWDTNTLQTAD 136 (408)
T ss_dssp EEEETTSEEEEEETTTTEEEE
T ss_pred EEEeCCCeEEEeeCCCCccce
Confidence 999999999999998876543
No 70
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.53 E-value=8.4e-14 Score=92.02 Aligned_cols=83 Identities=14% Similarity=0.149 Sum_probs=72.7
Q ss_pred cCCCCCceEEEEEecC---CCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEE-eeccCCCeEEEEEcCCCCeE
Q psy11100 10 AIPNNTKVNCLAWHQN---QGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQS-LQGHSGKVRAIIWNEQYEKL 85 (110)
Q Consensus 10 ~~~h~~~v~~~~~~p~---~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~s~~~~~l 85 (110)
..+|.+.|.+++|+|+ ++++++++.|+.|++||+.... .... +.+|...|.+++|+ ++..+
T Consensus 191 ~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~--------------~~~~~~~~h~~~v~~~~~s-d~~~l 255 (450)
T 2vdu_B 191 ILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCF--------------IVDKWLFGHKHFVSSICCG-KDYLL 255 (450)
T ss_dssp SEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTT--------------CEEEECCCCSSCEEEEEEC-STTEE
T ss_pred eecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCc--------------eeeeeecCCCCceEEEEEC-CCCEE
Confidence 3468899999999999 9999999999999999998765 3444 55789999999999 99999
Q ss_pred EEecCCCcEEEEeCCCCCChhh
Q psy11100 86 TSSDETGLIIVWMLYKCNDDDE 107 (110)
Q Consensus 86 ~s~~~~~~i~~w~~~~~~~~~~ 107 (110)
++++.|+.|++||+.+++.+..
T Consensus 256 ~s~~~d~~v~vwd~~~~~~~~~ 277 (450)
T 2vdu_B 256 LSAGGDDKIFAWDWKTGKNLST 277 (450)
T ss_dssp EEEESSSEEEEEETTTCCEEEE
T ss_pred EEEeCCCeEEEEECCCCcEeee
Confidence 9999999999999999876543
No 71
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.53 E-value=3.2e-13 Score=85.58 Aligned_cols=85 Identities=12% Similarity=0.058 Sum_probs=71.9
Q ss_pred eccCCCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCC-eEE
Q psy11100 8 KIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYE-KLT 86 (110)
Q Consensus 8 ~~~~~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~ 86 (110)
.+..+|.+.|.+++|+|++..+++++.|+.+++|++..... . ........|...|.+++|+|++. .++
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~---~--------~~~~~~~~~~~~v~~~~~~~~~~~~l~ 73 (342)
T 1yfq_A 5 QIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAK---N--------VDLLQSLRYKHPLLCCNFIDNTDLQIY 73 (342)
T ss_dssp ECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTT---E--------EEEEEEEECSSCEEEEEEEESSSEEEE
T ss_pred ecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCc---c--------ccceeeeecCCceEEEEECCCCCcEEE
Confidence 45568999999999999999999999999999999986530 0 12344557889999999999999 999
Q ss_pred EecCCCcEEEEeC-CCCC
Q psy11100 87 SSDETGLIIVWML-YKCN 103 (110)
Q Consensus 87 s~~~~~~i~~w~~-~~~~ 103 (110)
+++.++.|++||+ .++.
T Consensus 74 ~~~~dg~i~~wd~~~~~~ 91 (342)
T 1yfq_A 74 VGTVQGEILKVDLIGSPS 91 (342)
T ss_dssp EEETTSCEEEECSSSSSS
T ss_pred EEcCCCeEEEEEeccCCc
Confidence 9999999999999 7664
No 72
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.53 E-value=1.2e-13 Score=88.27 Aligned_cols=81 Identities=17% Similarity=0.357 Sum_probs=71.6
Q ss_pred CCCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecC
Q psy11100 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE 90 (110)
Q Consensus 11 ~~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 90 (110)
..|.++|.+++|+|+++++++++.++.+++|++.... +.....+..|...|.+++|+|++..+++++.
T Consensus 5 ~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~------------~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~ 72 (372)
T 1k8k_C 5 SFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNK------------WVQVHELKEHNGQVTGVDWAPDSNRIVTCGT 72 (372)
T ss_dssp ESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTE------------EEEEEEEECCSSCEEEEEEETTTTEEEEEET
T ss_pred cccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCc------------EEeeeeecCCCCcccEEEEeCCCCEEEEEcC
Confidence 3588999999999999999999999999999998762 1145677789999999999999999999999
Q ss_pred CCcEEEEeCCCCC
Q psy11100 91 TGLIIVWMLYKCN 103 (110)
Q Consensus 91 ~~~i~~w~~~~~~ 103 (110)
|+.|++||+.+++
T Consensus 73 dg~i~vwd~~~~~ 85 (372)
T 1k8k_C 73 DRNAYVWTLKGRT 85 (372)
T ss_dssp TSCEEEEEEETTE
T ss_pred CCeEEEEECCCCe
Confidence 9999999998775
No 73
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.52 E-value=8.1e-14 Score=90.02 Aligned_cols=81 Identities=19% Similarity=0.281 Sum_probs=72.7
Q ss_pred CCceEEEEEecCCCEEEEEecC---CcEEEEEcCCCCCcCCcccccccceeeeEEeec-------------cCCCeEEEE
Q psy11100 14 NTKVNCLAWHQNQGWIAVGGDD---GLLKVLKLDTGKESTGQVAAANVNLAMNQSLQG-------------HSGKVRAII 77 (110)
Q Consensus 14 ~~~v~~~~~~p~~~~l~~~~~~---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~v~~~~ 77 (110)
...+.+++|+|++..+++++.| +.+++||+.... ....+.. |...|.+++
T Consensus 233 ~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 298 (397)
T 1sq9_A 233 SNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGE--------------RIGSLSVPTHSSQASLGEFAHSSWVMSLS 298 (397)
T ss_dssp CCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCC--------------EEEEECBC--------CCBSBSSCEEEEE
T ss_pred CCccceEEECCCCCEEEEEecCCCCceEEEEECCCCc--------------ccceeccCcccccccccccccCCcEEEEE
Confidence 8999999999999999999999 999999998776 5566666 889999999
Q ss_pred EcCCCCeEEEecCCCcEEEEeCCCCCChhhh
Q psy11100 78 WNEQYEKLTSSDETGLIIVWMLYKCNDDDEW 108 (110)
Q Consensus 78 ~s~~~~~l~s~~~~~~i~~w~~~~~~~~~~~ 108 (110)
|+|++..+++++.|+.|++||+++++.+.++
T Consensus 299 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 329 (397)
T 1sq9_A 299 FNDSGETLCSAGWDGKLRFWDVKTKERITTL 329 (397)
T ss_dssp ECSSSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred ECCCCCEEEEEeCCCeEEEEEcCCCceeEEE
Confidence 9999999999999999999999988765544
No 74
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.52 E-value=1.3e-13 Score=89.27 Aligned_cols=89 Identities=7% Similarity=0.063 Sum_probs=72.3
Q ss_pred ccCCCCCceEEEEEecCCCEEEEEecCC----cEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCe
Q psy11100 9 IAIPNNTKVNCLAWHQNQGWIAVGGDDG----LLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEK 84 (110)
Q Consensus 9 ~~~~h~~~v~~~~~~p~~~~l~~~~~~~----~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 84 (110)
...+|...|.+++|+|++..+++++.++ .++.|++..... .......+..|...|.+++|+|+|++
T Consensus 214 ~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~----------~~~~~~~~~~~~~~V~~~~~Spdg~~ 283 (365)
T 4h5i_A 214 TDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNT----------SVLRSKQVTNRFKGITSMDVDMKGEL 283 (365)
T ss_dssp CCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEE----------EEEEEEEEESSCSCEEEEEECTTSCE
T ss_pred ecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeeccccccee----------cceeeeeecCCCCCeEeEEECCCCCc
Confidence 3446888999999999999999998877 577888776530 01123456778899999999999999
Q ss_pred EEEecCCCcEEEEeCCCCCChhh
Q psy11100 85 LTSSDETGLIIVWMLYKCNDDDE 107 (110)
Q Consensus 85 l~s~~~~~~i~~w~~~~~~~~~~ 107 (110)
|++++.|++|++||+++++.+.+
T Consensus 284 lasgs~D~~V~iwd~~~~~~~~~ 306 (365)
T 4h5i_A 284 AVLASNDNSIALVKLKDLSMSKI 306 (365)
T ss_dssp EEEEETTSCEEEEETTTTEEEEE
T ss_pred eEEEcCCCEEEEEECCCCcEEEE
Confidence 99999999999999999887654
No 75
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.52 E-value=1.1e-13 Score=89.73 Aligned_cols=79 Identities=9% Similarity=0.141 Sum_probs=72.4
Q ss_pred CCCCceEEEEEec-CCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCC-CeEEEec
Q psy11100 12 PNNTKVNCLAWHQ-NQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQY-EKLTSSD 89 (110)
Q Consensus 12 ~h~~~v~~~~~~p-~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~s~~ 89 (110)
+|...|.+++|+| ++.++++++.|+.+++||+.... ....+..|...|.+++|+|++ ..+++++
T Consensus 260 ~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~--------------~~~~~~~~~~~v~~~~~s~~~~~~l~s~~ 325 (416)
T 2pm9_A 260 GHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAE--------------QLSQFPARGNWCFKTKFAPEAPDLFACAS 325 (416)
T ss_dssp CCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCC--------------EEEEEECSSSCCCCEEECTTCTTEEEECC
T ss_pred CccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCc--------------cceeecCCCCceEEEEECCCCCCEEEEEe
Confidence 6889999999999 89999999999999999999876 667788899999999999999 7899999
Q ss_pred CCCcEEEEeCCCCCC
Q psy11100 90 ETGLIIVWMLYKCND 104 (110)
Q Consensus 90 ~~~~i~~w~~~~~~~ 104 (110)
.|+.|++|++.++..
T Consensus 326 ~d~~i~iw~~~~~~~ 340 (416)
T 2pm9_A 326 FDNKIEVQTLQNLTN 340 (416)
T ss_dssp SSSEEEEEESCCCCC
T ss_pred cCCcEEEEEccCCCC
Confidence 999999999987654
No 76
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.52 E-value=8.2e-14 Score=87.44 Aligned_cols=76 Identities=14% Similarity=0.281 Sum_probs=63.2
Q ss_pred ceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEe--eccCCCeEEEEEcCCCCeEEEecCCCc
Q psy11100 16 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSL--QGHSGKVRAIIWNEQYEKLTSSDETGL 93 (110)
Q Consensus 16 ~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~s~~~~~l~s~~~~~~ 93 (110)
++.+++||+++ +|++| .|++|++||+.++. ....+ ..|...|.+++|+|+++.+++++.|+.
T Consensus 27 y~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~--------------~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~ 90 (318)
T 4ggc_A 27 YLNLVDWSSGN-VLAVA-LDNSVYLWSASSGD--------------ILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAE 90 (318)
T ss_dssp TCBCEEECTTS-EEEEE-ETTEEEEEETTTCC--------------EEEEEECCSTTCCEEEEEECTTSSEEEEEETTSE
T ss_pred cceEEEECCCC-EEEEE-eCCEEEEEECCCCC--------------EEEEEEecCCCCeEEEEEECCCCCEEEEEECCCc
Confidence 46789999976 66665 48999999999876 44444 467788999999999999999999999
Q ss_pred EEEEeCCCCCChhh
Q psy11100 94 IIVWMLYKCNDDDE 107 (110)
Q Consensus 94 i~~w~~~~~~~~~~ 107 (110)
|++|++++++.+.+
T Consensus 91 v~iw~~~~~~~~~~ 104 (318)
T 4ggc_A 91 VQLWDVQQQKRLRN 104 (318)
T ss_dssp EEEEETTTTEEEEE
T ss_pred EEEeecCCceeEEE
Confidence 99999998876544
No 77
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.52 E-value=2.8e-13 Score=86.12 Aligned_cols=93 Identities=14% Similarity=0.175 Sum_probs=72.3
Q ss_pred CCCCceEEEEEecCCC-EEEEEecCCcEEEEEcCCCCCcC-----CcccccccceeeeEEeeccCCCeEEEEEcCCCCeE
Q psy11100 12 PNNTKVNCLAWHQNQG-WIAVGGDDGLLKVLKLDTGKEST-----GQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKL 85 (110)
Q Consensus 12 ~h~~~v~~~~~~p~~~-~l~~~~~~~~v~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 85 (110)
+|...|.+++|+|++. ++++++.|+.+++||+....... +...........+..+..|...|.+++|+|++..+
T Consensus 257 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 336 (357)
T 3i2n_A 257 AHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGL 336 (357)
T ss_dssp CCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTE
T ss_pred CCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeE
Confidence 7899999999999988 89999999999999998654210 01111122334567788899999999999999998
Q ss_pred E-EecCCCcEEEEeCCCCCC
Q psy11100 86 T-SSDETGLIIVWMLYKCND 104 (110)
Q Consensus 86 ~-s~~~~~~i~~w~~~~~~~ 104 (110)
+ +++.|+.|++||+.+...
T Consensus 337 ~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 337 CVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp EEEEETTSEEEEEEECC---
T ss_pred EEEecCCCcEEEEECCCccc
Confidence 8 899999999999987653
No 78
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.52 E-value=1.9e-13 Score=88.21 Aligned_cols=85 Identities=21% Similarity=0.289 Sum_probs=70.8
Q ss_pred CCCCceEEEEEecCCC-EEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcC-CCCeEEEec
Q psy11100 12 PNNTKVNCLAWHQNQG-WIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNE-QYEKLTSSD 89 (110)
Q Consensus 12 ~h~~~v~~~~~~p~~~-~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~ 89 (110)
+|.+.|.+++|+|+++ .+++++.|+.+++||+...... . .....+ .|...|.+++|+| ++..+++++
T Consensus 202 ~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~--~--------~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~ 270 (383)
T 3ei3_B 202 LHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDK--N--------SYIAEM-PHEKPVNAAYFNPTDSTKLLTTD 270 (383)
T ss_dssp CSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCST--T--------CEEEEE-ECSSCEEEEEECTTTSCEEEEEE
T ss_pred cCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcc--c--------ceEEEe-cCCCceEEEEEcCCCCCEEEEEc
Confidence 6889999999999998 8999999999999999873200 0 023333 6889999999999 999999999
Q ss_pred CCCcEEEEeCCCCCChhh
Q psy11100 90 ETGLIIVWMLYKCNDDDE 107 (110)
Q Consensus 90 ~~~~i~~w~~~~~~~~~~ 107 (110)
.|+.|++||++++....+
T Consensus 271 ~d~~i~iwd~~~~~~~~~ 288 (383)
T 3ei3_B 271 QRNEIRVYSSYDWSKPDQ 288 (383)
T ss_dssp SSSEEEEEETTBTTSCSE
T ss_pred CCCcEEEEECCCCccccc
Confidence 999999999998776543
No 79
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.52 E-value=9.7e-15 Score=93.95 Aligned_cols=80 Identities=8% Similarity=0.083 Sum_probs=65.7
Q ss_pred CCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecCC
Q psy11100 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDET 91 (110)
Q Consensus 12 ~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~ 91 (110)
.+.+.|.+++|+|+++++++++.|+.+++|++.... ......+..|...|.+++|+|++..|++++.|
T Consensus 9 ~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~------------~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d 76 (377)
T 3dwl_C 9 ILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNG------------WKHARTFSDHDKIVTCVDWAPKSNRIVTCSQD 76 (377)
T ss_dssp ECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTE------------EEECCCBCCCSSCEEEEEECTTTCCEEEEETT
T ss_pred cCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCc------------eEEEEEEecCCceEEEEEEeCCCCEEEEEeCC
Confidence 466789999999999999999999999999998762 01456677899999999999999999999999
Q ss_pred CcEEEEeCCCCC
Q psy11100 92 GLIIVWMLYKCN 103 (110)
Q Consensus 92 ~~i~~w~~~~~~ 103 (110)
+.|++||+.++.
T Consensus 77 ~~v~vwd~~~~~ 88 (377)
T 3dwl_C 77 RNAYVYEKRPDG 88 (377)
T ss_dssp SSEEEC------
T ss_pred CeEEEEEcCCCC
Confidence 999999998876
No 80
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.52 E-value=1.9e-13 Score=88.52 Aligned_cols=79 Identities=23% Similarity=0.471 Sum_probs=69.4
Q ss_pred CCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecCCC
Q psy11100 13 NNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETG 92 (110)
Q Consensus 13 h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~~ 92 (110)
|.+.|.+++|+|++.++++++.++.+++|+.. .. ....+..|...|.+++|+|++..+++++.++
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~~-~~--------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~ 171 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENGELRLWNKT-GA--------------LLNVLNFHRAPIVSVKWNKDGTHIISMDVEN 171 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTSCEEEEETT-SC--------------EEEEECCCCSCEEEEEECTTSSEEEEEETTC
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEeCC-CC--------------eeeeccCCCccEEEEEECCCCCEEEEEecCC
Confidence 67799999999999999999999999999933 33 4567788999999999999999999999999
Q ss_pred cEEEEeCCCCCChh
Q psy11100 93 LIIVWMLYKCNDDD 106 (110)
Q Consensus 93 ~i~~w~~~~~~~~~ 106 (110)
.|++||+.+++...
T Consensus 172 ~i~iwd~~~~~~~~ 185 (425)
T 1r5m_A 172 VTILWNVISGTVMQ 185 (425)
T ss_dssp CEEEEETTTTEEEE
T ss_pred eEEEEECCCCcEEE
Confidence 99999998876544
No 81
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.51 E-value=1.5e-13 Score=87.27 Aligned_cols=81 Identities=16% Similarity=0.220 Sum_probs=69.0
Q ss_pred cCCCCCceEEEEEec--CCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCC--CCeE
Q psy11100 10 AIPNNTKVNCLAWHQ--NQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQ--YEKL 85 (110)
Q Consensus 10 ~~~h~~~v~~~~~~p--~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l 85 (110)
..+|.+.|.+++|+| +++.|++++.|+.+++||+.... +.....+.+|...|.+++|+|+ +..+
T Consensus 53 l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~------------~~~~~~~~~h~~~V~~v~~~p~~~g~~l 120 (316)
T 3bg1_A 53 LRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGT------------WEKSHEHAGHDSSVNSVCWAPHDYGLIL 120 (316)
T ss_dssp EECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSC------------CCEEEEECCCSSCCCEEEECCTTTCSCE
T ss_pred EcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCc------------ceEEEEccCCCCceEEEEECCCCCCcEE
Confidence 348999999999975 48899999999999999998652 0134567789999999999998 7789
Q ss_pred EEecCCCcEEEEeCCCC
Q psy11100 86 TSSDETGLIIVWMLYKC 102 (110)
Q Consensus 86 ~s~~~~~~i~~w~~~~~ 102 (110)
++++.|+.|++||++++
T Consensus 121 asgs~D~~i~lwd~~~~ 137 (316)
T 3bg1_A 121 ACGSSDGAISLLTYTGE 137 (316)
T ss_dssp EEECSSSCEEEEEECSS
T ss_pred EEEcCCCCEEEEecCCC
Confidence 99999999999998865
No 82
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.51 E-value=2.4e-13 Score=85.02 Aligned_cols=80 Identities=14% Similarity=0.190 Sum_probs=70.0
Q ss_pred CCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecCC
Q psy11100 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDET 91 (110)
Q Consensus 12 ~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~ 91 (110)
+|.+.+.+++|+|++ .+++++.|+.+++||+.... ....+..|...|.+++|+|++. +++++.|
T Consensus 223 ~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~--------------~~~~~~~~~~~i~~~~~~~~~~-~~~~~~d 286 (313)
T 3odt_A 223 GHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGS--------------LKQVITLPAISIWSVDCMSNGD-IIVGSSD 286 (313)
T ss_dssp CCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCC--------------EEEEEECSSSCEEEEEECTTSC-EEEEETT
T ss_pred cCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCc--------------eeEEEeccCceEEEEEEccCCC-EEEEeCC
Confidence 688999999999999 58899999999999999876 6677888889999999999998 5678889
Q ss_pred CcEEEEeCCCCCChhh
Q psy11100 92 GLIIVWMLYKCNDDDE 107 (110)
Q Consensus 92 ~~i~~w~~~~~~~~~~ 107 (110)
+.|++|++++++...+
T Consensus 287 g~i~iw~~~~~~~~~~ 302 (313)
T 3odt_A 287 NLVRIFSQEKSRWASE 302 (313)
T ss_dssp SCEEEEESCGGGCCC-
T ss_pred CcEEEEeCCCCceeeh
Confidence 9999999998776543
No 83
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.51 E-value=5.3e-13 Score=86.08 Aligned_cols=97 Identities=16% Similarity=0.252 Sum_probs=71.9
Q ss_pred CCCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCccc--------cc-------------------------c
Q psy11100 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVA--------AA-------------------------N 57 (110)
Q Consensus 11 ~~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~--------~~-------------------------~ 57 (110)
.+|.+.|.+++|+|+++.+++++.|+.+++||+........... .. .
T Consensus 242 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~ 321 (408)
T 4a11_B 242 TAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTV 321 (408)
T ss_dssp CSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEET
T ss_pred ccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEEC
Confidence 46889999999999999999999999999999986532100000 00 0
Q ss_pred cceeeeEEeeccCCCeEEEEEcCCCCeEEEecCCCcEEEEeCCCCCChhh
Q psy11100 58 VNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYKCNDDDE 107 (110)
Q Consensus 58 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~~~i~~w~~~~~~~~~~ 107 (110)
........+.+|...|.+++|+|++..|++++.|+.|++|++.+++.+.+
T Consensus 322 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~ 371 (408)
T 4a11_B 322 YSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPD 371 (408)
T ss_dssp TTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC------
T ss_pred cCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCC
Confidence 11124566778999999999999999999999999999999998776543
No 84
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.50 E-value=2.8e-13 Score=85.41 Aligned_cols=82 Identities=17% Similarity=0.173 Sum_probs=73.8
Q ss_pred CCCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecC
Q psy11100 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE 90 (110)
Q Consensus 11 ~~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 90 (110)
.+|...+.+++|+|+++.+++++.++.+++||+.... ....+..|...+.+++|+|++..+++++.
T Consensus 138 ~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~--------------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 203 (337)
T 1gxr_A 138 TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQT--------------LVRQFQGHTDGASCIDISNDGTKLWTGGL 203 (337)
T ss_dssp ECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE--------------EEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred ccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCc--------------eeeeeecccCceEEEEECCCCCEEEEEec
Confidence 3688899999999999999999999999999998876 56777889999999999999999999999
Q ss_pred CCcEEEEeCCCCCChh
Q psy11100 91 TGLIIVWMLYKCNDDD 106 (110)
Q Consensus 91 ~~~i~~w~~~~~~~~~ 106 (110)
++.|++||+++++...
T Consensus 204 dg~i~~~d~~~~~~~~ 219 (337)
T 1gxr_A 204 DNTVRSWDLREGRQLQ 219 (337)
T ss_dssp TSEEEEEETTTTEEEE
T ss_pred CCcEEEEECCCCceEe
Confidence 9999999998876543
No 85
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.50 E-value=6e-14 Score=92.44 Aligned_cols=84 Identities=18% Similarity=0.148 Sum_probs=69.6
Q ss_pred CCCCCceEEEEEecCCC-EEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEec
Q psy11100 11 IPNNTKVNCLAWHQNQG-WIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSD 89 (110)
Q Consensus 11 ~~h~~~v~~~~~~p~~~-~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 89 (110)
.+|...|.+++|+|++. ++++++.|+.|++||+...... ........|...|.+++|+|+|..|++++
T Consensus 247 ~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~-----------~~~~~~~~h~~~v~~~~~spdg~~l~s~~ 315 (435)
T 4e54_B 247 RMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGK-----------ASFLYSLPHRHPVNAACFSPDGARLLTTD 315 (435)
T ss_dssp BCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSS-----------SCCSBCCBCSSCEEECCBCTTSSEEEEEE
T ss_pred ecccceEEeeeecCCCceEEEEecCcceeeEEeccccccc-----------ceEEEeeeccccccceeECCCCCeeEEEc
Confidence 37899999999999875 7889999999999999875410 01223456889999999999999999999
Q ss_pred CCCcEEEEeCCCCCCh
Q psy11100 90 ETGLIIVWMLYKCNDD 105 (110)
Q Consensus 90 ~~~~i~~w~~~~~~~~ 105 (110)
.|+.|++||+.++...
T Consensus 316 ~D~~i~iwd~~~~~~~ 331 (435)
T 4e54_B 316 QKSEIRVYSASQWDCP 331 (435)
T ss_dssp SSSCEEEEESSSSSSE
T ss_pred CCCEEEEEECCCCccc
Confidence 9999999999887654
No 86
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.50 E-value=2.6e-13 Score=88.91 Aligned_cols=84 Identities=17% Similarity=0.256 Sum_probs=67.2
Q ss_pred eccCCCCCceEEEEEec-CCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEE
Q psy11100 8 KIAIPNNTKVNCLAWHQ-NQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLT 86 (110)
Q Consensus 8 ~~~~~h~~~v~~~~~~p-~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 86 (110)
.+..+|.+.|.+++|+| ++.++++++.|+.|++||+...... . .......+ .|...|.+++|+|++..++
T Consensus 57 ~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~--~------~~~~~~~~-~h~~~v~~~~~~~~~~~l~ 127 (437)
T 3gre_A 57 TLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVG--E------VYSSSLTY-DCSSTVTQITMIPNFDAFA 127 (437)
T ss_dssp EECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTT--C------CCSCSEEE-ECSSCEEEEEECTTSSEEE
T ss_pred eeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccC--c------ccceeeec-cCCCCEEEEEEeCCCCEEE
Confidence 34467999999999999 9999999999999999998762100 0 00011222 4889999999999999999
Q ss_pred EecCCCcEEEEeCC
Q psy11100 87 SSDETGLIIVWMLY 100 (110)
Q Consensus 87 s~~~~~~i~~w~~~ 100 (110)
+++.|+.|++||+.
T Consensus 128 s~s~dg~i~vwd~~ 141 (437)
T 3gre_A 128 VSSKDGQIIVLKVN 141 (437)
T ss_dssp EEETTSEEEEEEEE
T ss_pred EEeCCCEEEEEEec
Confidence 99999999999985
No 87
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.49 E-value=3.6e-13 Score=93.88 Aligned_cols=77 Identities=21% Similarity=0.343 Sum_probs=72.2
Q ss_pred CCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecCC
Q psy11100 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDET 91 (110)
Q Consensus 12 ~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~ 91 (110)
+|.+.|.+++|+|+++++++++.|+.+++|++..+. ....+..|...|.+++|+|++..+++++.|
T Consensus 53 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~--------------~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d 118 (814)
T 3mkq_A 53 VTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGE--------------KVVDFEAHPDYIRSIAVHPTKPYVLSGSDD 118 (814)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCC--------------EEEEEECCSSCEEEEEECSSSSEEEEEETT
T ss_pred cCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCc--------------EEEEEecCCCCEEEEEEeCCCCEEEEEcCC
Confidence 689999999999999999999999999999999876 667788899999999999999999999999
Q ss_pred CcEEEEeCCCC
Q psy11100 92 GLIIVWMLYKC 102 (110)
Q Consensus 92 ~~i~~w~~~~~ 102 (110)
+.|++||+.++
T Consensus 119 g~i~vw~~~~~ 129 (814)
T 3mkq_A 119 LTVKLWNWENN 129 (814)
T ss_dssp SEEEEEEGGGT
T ss_pred CEEEEEECCCC
Confidence 99999999876
No 88
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.49 E-value=3e-13 Score=85.71 Aligned_cols=92 Identities=16% Similarity=0.162 Sum_probs=72.3
Q ss_pred ccCCCCCceEEEEEec-CCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCC---------CeEEEEE
Q psy11100 9 IAIPNNTKVNCLAWHQ-NQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSG---------KVRAIIW 78 (110)
Q Consensus 9 ~~~~h~~~v~~~~~~p-~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~v~~~~~ 78 (110)
....|...+.+++|+| ++..+++++.++.+++|++......... .....+..|.. .|.+++|
T Consensus 188 ~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~i~~~~~ 259 (342)
T 1yfq_A 188 EESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNS--------SKRFAFRCHRLNLKDTNLAYPVNSIEF 259 (342)
T ss_dssp EECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTC--------TTCEEEECCCCCTTCCSSCCCEEEEEE
T ss_pred eecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCccccc--------ccceeeecccccccccccceeEEEEEE
Confidence 3446888999999999 9999999999999999999865100000 03345555544 8999999
Q ss_pred cCCCCeEEEecCCCcEEEEeCCCCCChhhh
Q psy11100 79 NEQYEKLTSSDETGLIIVWMLYKCNDDDEW 108 (110)
Q Consensus 79 s~~~~~l~s~~~~~~i~~w~~~~~~~~~~~ 108 (110)
+|++..+++++.|+.|++||+.+++.+.++
T Consensus 260 s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 289 (342)
T 1yfq_A 260 SPRHKFLYTAGSDGIISCWNLQTRKKIKNF 289 (342)
T ss_dssp CTTTCCEEEEETTSCEEEEETTTTEEEEEC
T ss_pred cCCCCEEEEecCCceEEEEcCccHhHhhhh
Confidence 999999999999999999999988765543
No 89
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.49 E-value=3e-13 Score=88.50 Aligned_cols=81 Identities=11% Similarity=0.108 Sum_probs=69.2
Q ss_pred cCCCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeE-------EeeccCCCeEEEEEcCCC
Q psy11100 10 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQ-------SLQGHSGKVRAIIWNEQY 82 (110)
Q Consensus 10 ~~~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~v~~~~~s~~~ 82 (110)
..+|...|.+++|+|+++.++++ .|+.+++||+.... .... .+..|...|.+++|+|++
T Consensus 173 ~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~-------------~~~~~~~~~~~~~~~~~~~v~~~~~~p~~ 238 (447)
T 3dw8_B 173 ANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITD-------------RSFNIVDIKPANMEELTEVITAAEFHPNS 238 (447)
T ss_dssp CSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEE-------------EEEEEEECCCSSGGGCCCCEEEEEECSSC
T ss_pred ccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCC-------------ceeeeeecccccccccCcceEEEEECCCC
Confidence 45899999999999999999998 79999999998432 0112 245788999999999998
Q ss_pred -CeEEEecCCCcEEEEeCCCCCC
Q psy11100 83 -EKLTSSDETGLIIVWMLYKCND 104 (110)
Q Consensus 83 -~~l~s~~~~~~i~~w~~~~~~~ 104 (110)
..+++++.|+.|++||++++..
T Consensus 239 ~~~l~s~~~dg~i~iwd~~~~~~ 261 (447)
T 3dw8_B 239 CNTFVYSSSKGTIRLCDMRASAL 261 (447)
T ss_dssp TTEEEEEETTSCEEEEETTTCSS
T ss_pred CcEEEEEeCCCeEEEEECcCCcc
Confidence 8999999999999999998775
No 90
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.49 E-value=1.4e-13 Score=98.14 Aligned_cols=84 Identities=12% Similarity=0.139 Sum_probs=69.6
Q ss_pred ccCCCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeE-----Eee-ccCCCeEEEEEc---
Q psy11100 9 IAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQ-----SLQ-GHSGKVRAIIWN--- 79 (110)
Q Consensus 9 ~~~~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~v~~~~~s--- 79 (110)
...+|.+.|.+++|+|+| +|++|+.|+.|++||+.... .+. .+. +|...|.+++|+
T Consensus 570 ~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~--------------~~~~~~~~~~~~gh~~~V~sv~Fs~~~ 634 (902)
T 2oaj_A 570 AVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPA--------------IIYMENIREISGAQSACVTCIEFVIME 634 (902)
T ss_dssp EECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTE--------------EEEEEEGGGTCSSCCCCEEEEEEEEEE
T ss_pred EEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCe--------------EEEEeehhHhccccccceEEEEEEEEe
Confidence 344699999999999999 99999999999999987654 211 232 788999999999
Q ss_pred --CCC---CeEEEecCCCcEEEEeC---CCCCChhh
Q psy11100 80 --EQY---EKLTSSDETGLIIVWML---YKCNDDDE 107 (110)
Q Consensus 80 --~~~---~~l~s~~~~~~i~~w~~---~~~~~~~~ 107 (110)
||| ..+++++.|++|++||+ .+|+...+
T Consensus 635 ~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~~~~~ 670 (902)
T 2oaj_A 635 YGDDGYSSILMVCGTDMGEVITYKILPASGGKFDVQ 670 (902)
T ss_dssp CTTSSSEEEEEEEEETTSEEEEEEEEECGGGCEEEE
T ss_pred cCCCCCcceEEEEEecCCcEEEEEEecCCCCcEEEE
Confidence 886 78999999999999998 67765443
No 91
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.49 E-value=4e-13 Score=87.96 Aligned_cols=86 Identities=8% Similarity=0.142 Sum_probs=68.5
Q ss_pred CCCCCceEEEEEecCC-CEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCC------------CeEEEE
Q psy11100 11 IPNNTKVNCLAWHQNQ-GWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSG------------KVRAII 77 (110)
Q Consensus 11 ~~h~~~v~~~~~~p~~-~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~v~~~~ 77 (110)
.+|...|.+++|+|++ ..+++++.|+.+++||+........ ....+..|.. .|.+++
T Consensus 223 ~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 292 (447)
T 3dw8_B 223 EELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR----------HSKLFEEPEDPSNRSFFSEIISSISDVK 292 (447)
T ss_dssp GGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCT----------TCEEECCC-----CCHHHHHTTCEEEEE
T ss_pred cccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccc----------eeeEeccCCCccccccccccCceEEEEE
Confidence 3789999999999998 9999999999999999987650000 0344555554 899999
Q ss_pred EcCCCCeEEEecCCCcEEEEeCCC-CCChhh
Q psy11100 78 WNEQYEKLTSSDETGLIIVWMLYK-CNDDDE 107 (110)
Q Consensus 78 ~s~~~~~l~s~~~~~~i~~w~~~~-~~~~~~ 107 (110)
|+|++..+++++. +.|++||+++ ++.+..
T Consensus 293 ~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~ 322 (447)
T 3dw8_B 293 FSHSGRYMMTRDY-LSVKVWDLNMENRPVET 322 (447)
T ss_dssp ECTTSSEEEEEES-SEEEEEETTCCSSCSCC
T ss_pred ECCCCCEEEEeeC-CeEEEEeCCCCccccce
Confidence 9999999999998 9999999987 654433
No 92
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.49 E-value=2.6e-13 Score=91.67 Aligned_cols=76 Identities=20% Similarity=0.410 Sum_probs=68.1
Q ss_pred CCCceEEEEEec----------CCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCC
Q psy11100 13 NNTKVNCLAWHQ----------NQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQY 82 (110)
Q Consensus 13 h~~~v~~~~~~p----------~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 82 (110)
|...|.+++|+| +++++++++.|+.|++|++.... .....+.+|...|.+++|+|++
T Consensus 530 h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~-------------~~~~~~~~h~~~v~~l~~s~~~ 596 (615)
T 1pgu_A 530 RTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPM-------------KIIKALNAHKDGVNNLLWETPS 596 (615)
T ss_dssp CSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTT-------------CCEEETTSSTTCEEEEEEEETT
T ss_pred CCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCc-------------eechhhhcCccceEEEEEcCCC
Confidence 999999999999 99999999999999999998862 1456778899999999999999
Q ss_pred CeEEEecCCCcEEEEeCCCC
Q psy11100 83 EKLTSSDETGLIIVWMLYKC 102 (110)
Q Consensus 83 ~~l~s~~~~~~i~~w~~~~~ 102 (110)
. +++++.|+.|++|++..+
T Consensus 597 ~-l~s~~~d~~v~iw~~~~~ 615 (615)
T 1pgu_A 597 T-LVSSGADACIKRWNVVLE 615 (615)
T ss_dssp E-EEEEETTSCEEEEEEC--
T ss_pred C-eEEecCCceEEEEeeecC
Confidence 9 999999999999998753
No 93
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.49 E-value=1.1e-13 Score=96.94 Aligned_cols=83 Identities=19% Similarity=0.310 Sum_probs=70.7
Q ss_pred ccCCCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCC--CCeEE
Q psy11100 9 IAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQ--YEKLT 86 (110)
Q Consensus 9 ~~~~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~ 86 (110)
+..+|.+.|.+++|+|+++++++|+.||.|++|++.... ......+.+|.+.|.+++|+|+ +..++
T Consensus 4 ~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~------------~~~~~~l~~h~~~V~~l~~s~~~~~~~l~ 71 (753)
T 3jro_A 4 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGET------------HKLIDTLTGHEGPVWRVDWAHPKFGTILA 71 (753)
T ss_dssp ----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTE------------EEEEEEECCCSSCEEEEEECCTTSCSEEE
T ss_pred ecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCC------------CccceeccCCcCceEEEEecCCCCCCEEE
Confidence 456899999999999999999999999999999998442 1255678889999999999988 89999
Q ss_pred EecCCCcEEEEeCCCCC
Q psy11100 87 SSDETGLIIVWMLYKCN 103 (110)
Q Consensus 87 s~~~~~~i~~w~~~~~~ 103 (110)
+++.||.|++||+.+++
T Consensus 72 s~s~Dg~I~vwd~~~~~ 88 (753)
T 3jro_A 72 SCSYDGKVLIWKEENGR 88 (753)
T ss_dssp EEETTSCEEEEEEETTE
T ss_pred EEeCCCeEEEEECCCCc
Confidence 99999999999998875
No 94
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.49 E-value=3.1e-13 Score=92.17 Aligned_cols=80 Identities=21% Similarity=0.437 Sum_probs=63.7
Q ss_pred ceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEe----eccCCCeEEEEEcCCCCeEEEecCC
Q psy11100 16 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSL----QGHSGKVRAIIWNEQYEKLTSSDET 91 (110)
Q Consensus 16 ~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~v~~~~~s~~~~~l~s~~~~ 91 (110)
.+.+++|+|||++|++|+.||.|++|++..+...+. . +-.+.++ .+|.+.|.+++|+|+| +++++.|
T Consensus 131 sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~------~-~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D 201 (588)
T 2j04_A 131 TYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTP------E-FYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSN 201 (588)
T ss_dssp CEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCC------C-CEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETT
T ss_pred cEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccc------c-ceeeeeeecccccccccEEEEEEcCCc--EEEEeCC
Confidence 599999999999999999999999999987630000 0 0023444 5577899999999999 7888889
Q ss_pred CcEEEEeCCCCCC
Q psy11100 92 GLIIVWMLYKCND 104 (110)
Q Consensus 92 ~~i~~w~~~~~~~ 104 (110)
+++++|++.++..
T Consensus 202 ~tVrlWd~~~~~~ 214 (588)
T 2j04_A 202 NSVFSMTVSASSH 214 (588)
T ss_dssp CCEEEECCCSSSS
T ss_pred CeEEEEECCCCcc
Confidence 9999999987763
No 95
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.48 E-value=5.7e-13 Score=86.17 Aligned_cols=74 Identities=15% Similarity=0.110 Sum_probs=58.0
Q ss_pred CCCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCe-EEEEEcCCCCeEEEec
Q psy11100 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKV-RAIIWNEQYEKLTSSD 89 (110)
Q Consensus 11 ~~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~s~~~~~l~s~~ 89 (110)
.+|.+.+.+..+ ++.++++++.|++|++||+..+. .+.++.+|...+ ..++|+|+|+.|++++
T Consensus 282 ~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk--------------~l~tL~gH~~~vvs~vafSPDG~~LaSGS 345 (356)
T 2w18_A 282 PGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQ--------------CTALLPPVSDQHWSFVKWSGTDSHLLAGQ 345 (356)
T ss_dssp TTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCS--------------EEEEECCC--CCCCEEEECSSSSEEEEEC
T ss_pred CCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCc--------------EEEEecCCCCCeEEEEEECCCCCEEEEEE
Confidence 355555433333 36688999999999999999987 778888887765 4689999999999999
Q ss_pred CCCcEEEEeCC
Q psy11100 90 ETGLIIVWMLY 100 (110)
Q Consensus 90 ~~~~i~~w~~~ 100 (110)
.|++|++||+.
T Consensus 346 ~D~TIklWd~~ 356 (356)
T 2w18_A 346 KDGNIFVYHYS 356 (356)
T ss_dssp TTSCEEEEEEC
T ss_pred CCCcEEEecCC
Confidence 99999999963
No 96
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.48 E-value=1.2e-12 Score=84.55 Aligned_cols=76 Identities=21% Similarity=0.283 Sum_probs=68.2
Q ss_pred CCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCC-eEEEecC
Q psy11100 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYE-KLTSSDE 90 (110)
Q Consensus 12 ~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~~ 90 (110)
+|...|.+++|+|+++.+++++.|+.+++||+. .. ....+..|...|.+++|+|++. .+++++.
T Consensus 161 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~--------------~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~ 225 (383)
T 3ei3_B 161 SWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GH--------------EIFKEKLHKAKVTHAEFNPRCDWLMATSSV 225 (383)
T ss_dssp CSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SC--------------EEEEEECSSSCEEEEEECSSCTTEEEEEET
T ss_pred CCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CC--------------EEEEeccCCCcEEEEEECCCCCCEEEEEeC
Confidence 355789999999999999999999999999995 33 4677888999999999999999 8999999
Q ss_pred CCcEEEEeCCCC
Q psy11100 91 TGLIIVWMLYKC 102 (110)
Q Consensus 91 ~~~i~~w~~~~~ 102 (110)
|+.|++||++++
T Consensus 226 d~~i~iwd~~~~ 237 (383)
T 3ei3_B 226 DATVKLWDLRNI 237 (383)
T ss_dssp TSEEEEEEGGGC
T ss_pred CCEEEEEeCCCC
Confidence 999999999874
No 97
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.48 E-value=3.1e-13 Score=87.66 Aligned_cols=83 Identities=25% Similarity=0.483 Sum_probs=71.1
Q ss_pred CCCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCC-CCeEEEec
Q psy11100 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQ-YEKLTSSD 89 (110)
Q Consensus 11 ~~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~s~~ 89 (110)
..|.+.|.+++|+|++.++++++.|+.+++|++..... .......+..|...|.+++|+|+ +..+++++
T Consensus 64 ~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~----------~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~ 133 (416)
T 2pm9_A 64 LQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANN----------AINSMARFSNHSSSVKTVKFNAKQDNVLASGG 133 (416)
T ss_dssp CCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTS----------CCCEEEECCCSSSCCCEEEECSSSTTBEEEEC
T ss_pred EecCCceEEEEECCCCCeEEEEccCCeEEEeecccccc----------cccchhhccCCccceEEEEEcCCCCCEEEEEc
Confidence 36888999999999999999999999999999987210 00145677889999999999998 88899999
Q ss_pred CCCcEEEEeCCCCC
Q psy11100 90 ETGLIIVWMLYKCN 103 (110)
Q Consensus 90 ~~~~i~~w~~~~~~ 103 (110)
.|+.|++||+.++.
T Consensus 134 ~dg~v~iwd~~~~~ 147 (416)
T 2pm9_A 134 NNGEIFIWDMNKCT 147 (416)
T ss_dssp SSSCEEBCBTTTTS
T ss_pred CCCeEEEEECCCCc
Confidence 99999999998876
No 98
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.46 E-value=1.3e-12 Score=82.28 Aligned_cols=84 Identities=15% Similarity=0.161 Sum_probs=72.2
Q ss_pred CCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecCC
Q psy11100 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDET 91 (110)
Q Consensus 12 ~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~ 91 (110)
+|...+.+++|+|+++.+++++.++.+++|++.... ......+..|...+.+++|+|++..+++++.+
T Consensus 95 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~------------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 162 (337)
T 1gxr_A 95 NRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPT------------PRIKAELTSSAPACYALAISPDSKVCFSCCSD 162 (337)
T ss_dssp CTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--------------EEEEEEECSSSCEEEEEECTTSSEEEEEETT
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCC------------cceeeecccCCCceEEEEECCCCCEEEEEeCC
Confidence 688999999999999999999999999999998754 01345667788999999999999999999999
Q ss_pred CcEEEEeCCCCCChhh
Q psy11100 92 GLIIVWMLYKCNDDDE 107 (110)
Q Consensus 92 ~~i~~w~~~~~~~~~~ 107 (110)
+.|++||+++++....
T Consensus 163 g~v~~~d~~~~~~~~~ 178 (337)
T 1gxr_A 163 GNIAVWDLHNQTLVRQ 178 (337)
T ss_dssp SCEEEEETTTTEEEEE
T ss_pred CcEEEEeCCCCceeee
Confidence 9999999998765443
No 99
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.46 E-value=9.1e-13 Score=83.86 Aligned_cols=79 Identities=10% Similarity=0.170 Sum_probs=70.5
Q ss_pred ceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecCCCcEE
Q psy11100 16 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLII 95 (110)
Q Consensus 16 ~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~~~i~ 95 (110)
.+.+++|+|+++.+++++.++.+++||+.... .....+..|...|.+++|+|++..+++++.|+.|+
T Consensus 177 ~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 243 (369)
T 3zwl_B 177 AATVAGWSTKGKYIIAGHKDGKISKYDVSNNY-------------EYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSF 243 (369)
T ss_dssp CEEEEEECGGGCEEEEEETTSEEEEEETTTTT-------------EEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred ceeEEEEcCCCCEEEEEcCCCEEEEEECCCCc-------------EeEEEEecCCCceeEEEECCCCCEEEEecCCceEE
Confidence 89999999999999999999999999998732 15677788999999999999999999999999999
Q ss_pred EEeCCCCCChhh
Q psy11100 96 VWMLYKCNDDDE 107 (110)
Q Consensus 96 ~w~~~~~~~~~~ 107 (110)
+||+++++....
T Consensus 244 v~d~~~~~~~~~ 255 (369)
T 3zwl_B 244 LVDVSTLQVLKK 255 (369)
T ss_dssp EEETTTCCEEEE
T ss_pred EEECCCCceeee
Confidence 999998776543
No 100
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.45 E-value=7.7e-13 Score=86.21 Aligned_cols=83 Identities=18% Similarity=0.316 Sum_probs=71.7
Q ss_pred CCCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCe-EEEec
Q psy11100 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEK-LTSSD 89 (110)
Q Consensus 11 ~~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-l~s~~ 89 (110)
.+|.+.|.+++|+|++..+++++.|+.+++||+.... ....+..|...|.+++|+|++.. +++++
T Consensus 214 ~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~--------------~~~~~~~~~~~v~~~~~~p~~~~ll~~~~ 279 (401)
T 4aez_A 214 QGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSI--------------PKFTKTNHNAAVKAVAWCPWQSNLLATGG 279 (401)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSS--------------EEEEECCCSSCCCEEEECTTSTTEEEEEC
T ss_pred cCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCC--------------ccEEecCCcceEEEEEECCCCCCEEEEec
Confidence 3789999999999999999999999999999999876 56677889999999999998765 66654
Q ss_pred --CCCcEEEEeCCCCCChhh
Q psy11100 90 --ETGLIIVWMLYKCNDDDE 107 (110)
Q Consensus 90 --~~~~i~~w~~~~~~~~~~ 107 (110)
.|+.|++||+.+++.+..
T Consensus 280 gs~d~~i~i~d~~~~~~~~~ 299 (401)
T 4aez_A 280 GTMDKQIHFWNAATGARVNT 299 (401)
T ss_dssp CTTTCEEEEEETTTCCEEEE
T ss_pred CCCCCEEEEEECCCCCEEEE
Confidence 699999999998876543
No 101
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.45 E-value=7.3e-13 Score=84.19 Aligned_cols=83 Identities=14% Similarity=0.200 Sum_probs=67.3
Q ss_pred eccCCCCCceEEEEEecCCCE-EEEEec---CCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCC--
Q psy11100 8 KIAIPNNTKVNCLAWHQNQGW-IAVGGD---DGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQ-- 81 (110)
Q Consensus 8 ~~~~~h~~~v~~~~~~p~~~~-l~~~~~---~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-- 81 (110)
.+..+|.+.|.+++|+|++.. +++++. |+.+++|++.... ........|...|.+++|+|+
T Consensus 12 ~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~-------------~~~~~~~~~~~~v~~~~~~~~~~ 78 (357)
T 3i2n_A 12 HIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGD-------------LKLLREIEKAKPIKCGTFGATSL 78 (357)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSS-------------EEEEEEEEESSCEEEEECTTCCT
T ss_pred hhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCc-------------ccceeeecccCcEEEEEEcCCCC
Confidence 445579999999999999864 566665 8999999999765 011223368899999999998
Q ss_pred -CCeEEEecCCCcEEEEeCCCCC
Q psy11100 82 -YEKLTSSDETGLIIVWMLYKCN 103 (110)
Q Consensus 82 -~~~l~s~~~~~~i~~w~~~~~~ 103 (110)
+..+++++.|+.|++||+.++.
T Consensus 79 ~~~~l~~~~~dg~i~iwd~~~~~ 101 (357)
T 3i2n_A 79 QQRYLATGDFGGNLHIWNLEAPE 101 (357)
T ss_dssp TTCCEEEEETTSCEEEECTTSCS
T ss_pred CCceEEEecCCCeEEEEeCCCCC
Confidence 6889999999999999999876
No 102
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.45 E-value=3e-13 Score=91.65 Aligned_cols=80 Identities=8% Similarity=0.118 Sum_probs=67.4
Q ss_pred CCCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEE--EEcCCC-CeEEE
Q psy11100 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAI--IWNEQY-EKLTS 87 (110)
Q Consensus 11 ~~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~s~~~-~~l~s 87 (110)
.+|.+.|.+++|+|++ .|++|+.||.|++||+.... .....+..|...|.++ +|+|++ ..|++
T Consensus 263 ~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~-------------~~~~~~~~H~~~V~sv~~~~s~~g~~~laS 328 (524)
T 2j04_B 263 SLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPE-------------VPSFYDQVHDSYILSVSTAYSDFEDTVVST 328 (524)
T ss_dssp CCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCS-------------SCSEEEECSSSCEEEEEEECCTTSCCEEEE
T ss_pred EcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCC-------------CceEEeecccccEEEEEEEcCCCCCeEEEE
Confidence 4688999999999864 79999999999999998653 0345678899999999 578887 88999
Q ss_pred ecCCCcEEEEeCCCCCC
Q psy11100 88 SDETGLIIVWMLYKCND 104 (110)
Q Consensus 88 ~~~~~~i~~w~~~~~~~ 104 (110)
++.|++|++||+++++.
T Consensus 329 ~S~D~tvklWD~~~~~~ 345 (524)
T 2j04_B 329 VAVDGYFYIFNPKDIAT 345 (524)
T ss_dssp EETTSEEEEECGGGHHH
T ss_pred eccCCeEEEEECCCCCc
Confidence 99999999999987543
No 103
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.44 E-value=3.1e-12 Score=81.78 Aligned_cols=83 Identities=24% Similarity=0.450 Sum_probs=70.7
Q ss_pred CCCCCceEEEEEec-------------CCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEE
Q psy11100 11 IPNNTKVNCLAWHQ-------------NQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAII 77 (110)
Q Consensus 11 ~~h~~~v~~~~~~p-------------~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 77 (110)
.+|...|.+++|+| ++..+++++.|+.+++||+.... ........+..|...|.+++
T Consensus 144 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~----------~~~~~~~~~~~h~~~v~~~~ 213 (379)
T 3jrp_A 144 DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDA----------QTYVLESTLEGHSDWVRDVA 213 (379)
T ss_dssp ECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTT----------TEEEEEEEECCCSSCEEEEE
T ss_pred cCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCC----------cceeeEEEEecccCcEeEEE
Confidence 37889999999999 68999999999999999998653 01123456778999999999
Q ss_pred EcCC---CCeEEEecCCCcEEEEeCCCCC
Q psy11100 78 WNEQ---YEKLTSSDETGLIIVWMLYKCN 103 (110)
Q Consensus 78 ~s~~---~~~l~s~~~~~~i~~w~~~~~~ 103 (110)
|+|+ +..+++++.|+.|++||+.++.
T Consensus 214 ~sp~~~~~~~l~s~~~dg~i~iwd~~~~~ 242 (379)
T 3jrp_A 214 WSPTVLLRSYLASVSQDRTCIIWTQDNEQ 242 (379)
T ss_dssp ECCCCSSSEEEEEEETTSCEEEEEESSTT
T ss_pred ECCCCCCCCeEEEEeCCCEEEEEeCCCCC
Confidence 9999 8889999999999999998764
No 104
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.44 E-value=1.6e-12 Score=94.31 Aligned_cols=82 Identities=20% Similarity=0.340 Sum_probs=73.9
Q ss_pred CCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCC--CCeEEEec
Q psy11100 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQ--YEKLTSSD 89 (110)
Q Consensus 12 ~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~s~~ 89 (110)
+|.+.|.+++|+|+++++++++.|+.+++||+..+. ....+..|...|.+++|+|+ +..+++++
T Consensus 655 ~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~--------------~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~ 720 (1249)
T 3sfz_A 655 AHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGK--------------LVHTYDEHSEQVNCCHFTNKSNHLLLATGS 720 (1249)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC--------------EEEEEECCSSCEEEEEECSSSSCCEEEEEE
T ss_pred cCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCc--------------eEEEEcCCCCcEEEEEEecCCCceEEEEEe
Confidence 799999999999999999999999999999999876 67788899999999999994 55799999
Q ss_pred CCCcEEEEeCCCCCChhh
Q psy11100 90 ETGLIIVWMLYKCNDDDE 107 (110)
Q Consensus 90 ~~~~i~~w~~~~~~~~~~ 107 (110)
.|+.|++||+.++.....
T Consensus 721 ~d~~v~vwd~~~~~~~~~ 738 (1249)
T 3sfz_A 721 NDFFLKLWDLNQKECRNT 738 (1249)
T ss_dssp TTSCEEEEETTSSSEEEE
T ss_pred CCCeEEEEECCCcchhhe
Confidence 999999999998875543
No 105
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.43 E-value=1.4e-12 Score=84.87 Aligned_cols=80 Identities=15% Similarity=0.161 Sum_probs=69.1
Q ss_pred CceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecCCCcE
Q psy11100 15 TKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLI 94 (110)
Q Consensus 15 ~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~~~i 94 (110)
..+....++|+++.+++++.|+.+++||+.... ....+..|...|.+++|+|++..+++++.|+.|
T Consensus 98 ~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~--------------~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i 163 (420)
T 3vl1_A 98 DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNL--------------QREIDQAHVSEITKLKFFPSGEALISSSQDMQL 163 (420)
T ss_dssp CEEEEEEECSSSCEEEEEETTSCEEEECTTSCE--------------EEEETTSSSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred CceEEEEEecCCCEEEEEECCCCEEEEeCCCcc--------------eeeecccccCccEEEEECCCCCEEEEEeCCCeE
Confidence 445556789999999999999999999998765 455667899999999999999999999999999
Q ss_pred EEEeCCCCCChhhh
Q psy11100 95 IVWMLYKCNDDDEW 108 (110)
Q Consensus 95 ~~w~~~~~~~~~~~ 108 (110)
++||+.+++...++
T Consensus 164 ~iwd~~~~~~~~~~ 177 (420)
T 3vl1_A 164 KIWSVKDGSNPRTL 177 (420)
T ss_dssp EEEETTTCCCCEEE
T ss_pred EEEeCCCCcCceEE
Confidence 99999988766544
No 106
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.43 E-value=1.3e-12 Score=84.53 Aligned_cols=81 Identities=19% Similarity=0.334 Sum_probs=72.2
Q ss_pred CCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecCC
Q psy11100 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDET 91 (110)
Q Consensus 12 ~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~ 91 (110)
+|...|.+++|+|+++.+++++.++.+++||+.... ....+..|...+.+++|+|++ .+++++.+
T Consensus 245 ~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~--------------~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d 309 (425)
T 1r5m_A 245 GHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGN--------------SQNCFYGHSQSIVSASWVGDD-KVISCSMD 309 (425)
T ss_dssp CCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBS--------------CSEEECCCSSCEEEEEEETTT-EEEEEETT
T ss_pred cCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCc--------------cceEecCCCccEEEEEECCCC-EEEEEeCC
Confidence 688999999999999999999999999999998765 456677889999999999999 99999999
Q ss_pred CcEEEEeCCCCCChhh
Q psy11100 92 GLIIVWMLYKCNDDDE 107 (110)
Q Consensus 92 ~~i~~w~~~~~~~~~~ 107 (110)
+.|++||+.+++.+..
T Consensus 310 ~~i~i~d~~~~~~~~~ 325 (425)
T 1r5m_A 310 GSVRLWSLKQNTLLAL 325 (425)
T ss_dssp SEEEEEETTTTEEEEE
T ss_pred CcEEEEECCCCcEeEe
Confidence 9999999988765443
No 107
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.43 E-value=3.2e-12 Score=84.31 Aligned_cols=80 Identities=18% Similarity=0.304 Sum_probs=71.3
Q ss_pred CCCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEc--CCCCeEEEe
Q psy11100 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWN--EQYEKLTSS 88 (110)
Q Consensus 11 ~~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s--~~~~~l~s~ 88 (110)
.+|.+.|.+++|+|++ .+++++.|+.+++||+..+. ....+..|...|.+++|+ +++..++++
T Consensus 159 ~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~--------------~~~~~~~h~~~v~~l~~~~~~~~~~l~s~ 223 (464)
T 3v7d_B 159 SGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGC--------------CTHVFEGHNSTVRCLDIVEYKNIKYIVTG 223 (464)
T ss_dssp CCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTE--------------EEEEECCCSSCEEEEEEEESSSCEEEEEE
T ss_pred eCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCc--------------EEEEECCCCCccEEEEEecCCCCCEEEEE
Confidence 3799999999999988 89999999999999999876 667788899999999998 567889999
Q ss_pred cCCCcEEEEeCCCCCCh
Q psy11100 89 DETGLIIVWMLYKCNDD 105 (110)
Q Consensus 89 ~~~~~i~~w~~~~~~~~ 105 (110)
+.|+.|++||++++...
T Consensus 224 s~d~~i~vwd~~~~~~~ 240 (464)
T 3v7d_B 224 SRDNTLHVWKLPKESSV 240 (464)
T ss_dssp ETTSCEEEEECCCCCCC
T ss_pred cCCCcEEEeeCCCCccc
Confidence 99999999999887643
No 108
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.43 E-value=2e-12 Score=84.74 Aligned_cols=82 Identities=15% Similarity=0.182 Sum_probs=70.9
Q ss_pred CCCceEEEE--EecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeec--cCCCeEEEEEcCCCCeEEEe
Q psy11100 13 NNTKVNCLA--WHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQG--HSGKVRAIIWNEQYEKLTSS 88 (110)
Q Consensus 13 h~~~v~~~~--~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~s~ 88 (110)
+...+.++. ++|++..+++++.|+.+++||+.... ....+.. |...|.+++|+|++..++++
T Consensus 167 ~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~--------------~~~~~~~~~h~~~v~~~~~s~~~~~l~s~ 232 (437)
T 3gre_A 167 KNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLE--------------RLQIIENSPRHGAVSSICIDEECCVLILG 232 (437)
T ss_dssp SCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCC--------------EEEEEECCGGGCCEEEEEECTTSCEEEEE
T ss_pred cccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCe--------------eeEEEccCCCCCceEEEEECCCCCEEEEE
Confidence 567777777 56789999999999999999999876 5667776 88999999999999999999
Q ss_pred cCCCcEEEEeCCCCCChhhh
Q psy11100 89 DETGLIIVWMLYKCNDDDEW 108 (110)
Q Consensus 89 ~~~~~i~~w~~~~~~~~~~~ 108 (110)
+.|+.|++||++++..+.++
T Consensus 233 ~~dg~i~iwd~~~~~~~~~~ 252 (437)
T 3gre_A 233 TTRGIIDIWDIRFNVLIRSW 252 (437)
T ss_dssp ETTSCEEEEETTTTEEEEEE
T ss_pred cCCCeEEEEEcCCccEEEEE
Confidence 99999999999987765543
No 109
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.42 E-value=4.9e-13 Score=90.62 Aligned_cols=73 Identities=8% Similarity=0.003 Sum_probs=65.7
Q ss_pred ceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecCCCcEE
Q psy11100 16 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLII 95 (110)
Q Consensus 16 ~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~~~i~ 95 (110)
.|.+++|+|+++.+++++.|+.+++||+.... ....+.+|.+.|.+++|+|+|+.+++++.|++|+
T Consensus 357 ~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~--------------~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~ 422 (524)
T 2j04_B 357 NLVPVVYCPQIYSYIYSDGASSLRAVPSRAAF--------------AVHPLVSRETTITAIGVSRLHPMVLAGSADGSLI 422 (524)
T ss_dssp SCCCEEEETTTTEEEEECSSSEEEEEETTCTT--------------CCEEEEECSSCEEEEECCSSCCBCEEEETTTEEE
T ss_pred cccceEeCCCcCeEEEeCCCCcEEEEECcccc--------------cceeeecCCCceEEEEeCCCCCeEEEEECCCEEE
Confidence 47889999999999999999999999998865 4566778999999999999999999999999999
Q ss_pred EEeCCCC
Q psy11100 96 VWMLYKC 102 (110)
Q Consensus 96 ~w~~~~~ 102 (110)
+||+..+
T Consensus 423 lwd~~~~ 429 (524)
T 2j04_B 423 ITNAARR 429 (524)
T ss_dssp CCBSCSS
T ss_pred EEechHh
Confidence 9998653
No 110
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.41 E-value=5.5e-12 Score=83.23 Aligned_cols=79 Identities=16% Similarity=0.267 Sum_probs=71.1
Q ss_pred CCCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecC
Q psy11100 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE 90 (110)
Q Consensus 11 ~~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 90 (110)
.+|...|.+++|+|+++.+++++.|+.+++||+..+. ....+..|...|.+++|+ +..+++++.
T Consensus 307 ~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~--------------~~~~~~~h~~~v~~~~~~--~~~l~s~s~ 370 (464)
T 3v7d_B 307 SGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGE--------------LMYTLQGHTALVGLLRLS--DKFLVSAAA 370 (464)
T ss_dssp CCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTE--------------EEEEECCCSSCEEEEEEC--SSEEEEEET
T ss_pred cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCc--------------EEEEEeCCCCcEEEEEEc--CCEEEEEeC
Confidence 3689999999999999999999999999999999876 677888999999999997 578999999
Q ss_pred CCcEEEEeCCCCCCh
Q psy11100 91 TGLIIVWMLYKCNDD 105 (110)
Q Consensus 91 ~~~i~~w~~~~~~~~ 105 (110)
|+.|++||+.++...
T Consensus 371 dg~v~vwd~~~~~~~ 385 (464)
T 3v7d_B 371 DGSIRGWDANDYSRK 385 (464)
T ss_dssp TSEEEEEETTTCCEE
T ss_pred CCcEEEEECCCCcee
Confidence 999999999886543
No 111
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.41 E-value=7e-12 Score=82.55 Aligned_cols=82 Identities=17% Similarity=0.305 Sum_probs=69.0
Q ss_pred cCCCCCceEEEEEec-CCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCC-eEEE
Q psy11100 10 AIPNNTKVNCLAWHQ-NQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYE-KLTS 87 (110)
Q Consensus 10 ~~~h~~~v~~~~~~p-~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s 87 (110)
..+|.+.|.+++|+| ++..+++++.++.|++||+..... ......+..|...|.+++|+|++. .+++
T Consensus 227 ~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~-----------~~~~~~~~~~~~~v~~i~~~p~~~~~l~t 295 (430)
T 2xyi_A 227 FTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNT-----------SKPSHTVDAHTAEVNCLSFNPYSEFILAT 295 (430)
T ss_dssp ECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCS-----------SSCSEEEECCSSCEEEEEECSSCTTEEEE
T ss_pred ecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCC-----------CcceeEeecCCCCeEEEEeCCCCCCEEEE
Confidence 347999999999999 678899999999999999986520 013456678899999999999988 5889
Q ss_pred ecCCCcEEEEeCCCC
Q psy11100 88 SDETGLIIVWMLYKC 102 (110)
Q Consensus 88 ~~~~~~i~~w~~~~~ 102 (110)
++.|+.|++||+++.
T Consensus 296 g~~dg~v~vwd~~~~ 310 (430)
T 2xyi_A 296 GSADKTVALWDLRNL 310 (430)
T ss_dssp EETTSEEEEEETTCT
T ss_pred EeCCCeEEEEeCCCC
Confidence 999999999999873
No 112
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.40 E-value=4.7e-12 Score=83.36 Aligned_cols=77 Identities=26% Similarity=0.438 Sum_probs=68.0
Q ss_pred CCCCceEEEEEecCCC-EEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCC-eEEEec
Q psy11100 12 PNNTKVNCLAWHQNQG-WIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYE-KLTSSD 89 (110)
Q Consensus 12 ~h~~~v~~~~~~p~~~-~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~ 89 (110)
.|.+.|.+++|+|++. .+++++.|+.|++||+.... ..+..+..|...|.+++|+|++. ++++++
T Consensus 275 ~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~-------------~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~ 341 (430)
T 2xyi_A 275 AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK-------------LKLHSFESHKDEIFQVQWSPHNETILASSG 341 (430)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTT-------------SCSEEEECCSSCEEEEEECSSCTTEEEEEE
T ss_pred cCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCC-------------CCeEEeecCCCCEEEEEECCCCCCEEEEEe
Confidence 7889999999999987 78999999999999998743 14567788999999999999986 589999
Q ss_pred CCCcEEEEeCCC
Q psy11100 90 ETGLIIVWMLYK 101 (110)
Q Consensus 90 ~~~~i~~w~~~~ 101 (110)
.|+.|++||+.+
T Consensus 342 ~d~~i~iwd~~~ 353 (430)
T 2xyi_A 342 TDRRLHVWDLSK 353 (430)
T ss_dssp TTSCCEEEEGGG
T ss_pred CCCcEEEEeCCC
Confidence 999999999987
No 113
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.39 E-value=6.6e-12 Score=82.95 Aligned_cols=80 Identities=16% Similarity=0.181 Sum_probs=67.8
Q ss_pred CCCCceEEEEEecCCCEE-EEEecCCcEEEEEcC--CCCCcCCcccccccceeeeEEee--ccCCCeEEEEEcCCCCeEE
Q psy11100 12 PNNTKVNCLAWHQNQGWI-AVGGDDGLLKVLKLD--TGKESTGQVAAANVNLAMNQSLQ--GHSGKVRAIIWNEQYEKLT 86 (110)
Q Consensus 12 ~h~~~v~~~~~~p~~~~l-~~~~~~~~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~ 86 (110)
+|.+.|.+++|+|+++.| ++++.|+.+++|++. .+. ....+. .+...|.+++|+|++..++
T Consensus 100 ~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~--------------~~~~~~~~~~~~~v~~~~~sp~~~~l~ 165 (450)
T 2vdu_B 100 PIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKN--------------VLKLRKRFCFSKRPNAISIAEDDTTVI 165 (450)
T ss_dssp CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSS--------------CEEEEEEEECSSCEEEEEECTTSSEEE
T ss_pred ccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCc--------------eeeeeecccCCCCceEEEEcCCCCEEE
Confidence 566789999999999986 899999999999998 554 334444 4568899999999999999
Q ss_pred EecCCCcEEEEeCCCCCCh
Q psy11100 87 SSDETGLIIVWMLYKCNDD 105 (110)
Q Consensus 87 s~~~~~~i~~w~~~~~~~~ 105 (110)
+++.++.+++|++.++...
T Consensus 166 ~~~~~g~v~~~~~~~~~~~ 184 (450)
T 2vdu_B 166 IADKFGDVYSIDINSIPEE 184 (450)
T ss_dssp EEETTSEEEEEETTSCCCS
T ss_pred EEeCCCcEEEEecCCcccc
Confidence 9999999999999877654
No 114
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.38 E-value=9.4e-13 Score=87.30 Aligned_cols=90 Identities=14% Similarity=0.168 Sum_probs=67.6
Q ss_pred CCCCceEEEEEecCCCEEE----EEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCC-CCeEE
Q psy11100 12 PNNTKVNCLAWHQNQGWIA----VGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQ-YEKLT 86 (110)
Q Consensus 12 ~h~~~v~~~~~~p~~~~l~----~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~ 86 (110)
++.+.|.+++|+|+|++|+ +++.|+.+++||+........ .....+.....+.+|...|.+++|+|+ +..++
T Consensus 90 ~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~---~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~la 166 (434)
T 2oit_A 90 PMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAK---QQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVA 166 (434)
T ss_dssp CCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTC---SSCCCSEEEECCCSGGGSEEEEEECSSCTTEEE
T ss_pred cCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCc---CCcceeeeeeccCCCCCceEEEEECCCCCCEEE
Confidence 4567799999999999998 788899999999865310000 000011123455678999999999998 78899
Q ss_pred EecCCCcEEEEeCCCCCC
Q psy11100 87 SSDETGLIIVWMLYKCND 104 (110)
Q Consensus 87 s~~~~~~i~~w~~~~~~~ 104 (110)
+++.|++|++||++++..
T Consensus 167 s~s~Dg~v~iwD~~~~~~ 184 (434)
T 2oit_A 167 VCLADGSIAVLQVTETVK 184 (434)
T ss_dssp EEETTSCEEEEEESSSEE
T ss_pred EEECCCeEEEEEcCCCcc
Confidence 999999999999988743
No 115
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.38 E-value=1.6e-11 Score=80.03 Aligned_cols=77 Identities=19% Similarity=0.445 Sum_probs=68.6
Q ss_pred cCCCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEec
Q psy11100 10 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSD 89 (110)
Q Consensus 10 ~~~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 89 (110)
...|.+.|.+++|+|++..+++++.||.+++||+.... ....+..|...|.+++| ++..+++++
T Consensus 130 ~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~--------------~~~~~~~~~~~v~~~~~--~~~~l~~~~ 193 (401)
T 4aez_A 130 ETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQT--------------KLRTMAGHQARVGCLSW--NRHVLSSGS 193 (401)
T ss_dssp ECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCC--------------EEEEECCCSSCEEEEEE--ETTEEEEEE
T ss_pred ecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCe--------------EEEEecCCCCceEEEEE--CCCEEEEEc
Confidence 33588999999999999999999999999999998876 56778899999999999 457899999
Q ss_pred CCCcEEEEeCCCC
Q psy11100 90 ETGLIIVWMLYKC 102 (110)
Q Consensus 90 ~~~~i~~w~~~~~ 102 (110)
.|+.|.+||++..
T Consensus 194 ~dg~i~i~d~~~~ 206 (401)
T 4aez_A 194 RSGAIHHHDVRIA 206 (401)
T ss_dssp TTSEEEEEETTSS
T ss_pred CCCCEEEEecccC
Confidence 9999999999843
No 116
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.38 E-value=1.1e-11 Score=81.31 Aligned_cols=76 Identities=18% Similarity=0.360 Sum_probs=67.9
Q ss_pred CCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecCC
Q psy11100 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDET 91 (110)
Q Consensus 12 ~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~ 91 (110)
+|...|++++|+|+|+++++|+.|+.|++||+.... .+..+.+|...+.+++| ++..+++++.|
T Consensus 145 ~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~--------------~~~~~~~h~~~v~~~s~--~~~~l~sgs~d 208 (420)
T 4gga_A 145 QPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQK--------------RLRNMTSHSARVGSLSW--NSYILSSGSRS 208 (420)
T ss_dssp STTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTE--------------EEEEECCCSSCEEEEEE--ETTEEEEEETT
T ss_pred CCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCc--------------EEEEEeCCCCceEEEee--CCCEEEEEeCC
Confidence 577889999999999999999999999999999876 67788899999988877 46789999999
Q ss_pred CcEEEEeCCCCC
Q psy11100 92 GLIIVWMLYKCN 103 (110)
Q Consensus 92 ~~i~~w~~~~~~ 103 (110)
+.+.+||.....
T Consensus 209 ~~i~~~d~~~~~ 220 (420)
T 4gga_A 209 GHIHHHDVRVAE 220 (420)
T ss_dssp SEEEEEETTSSS
T ss_pred CceeEeeecccc
Confidence 999999987644
No 117
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.37 E-value=9.4e-12 Score=87.18 Aligned_cols=82 Identities=17% Similarity=0.207 Sum_probs=71.7
Q ss_pred cCCCCCceEEEEEecC--CCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCC--CCeE
Q psy11100 10 AIPNNTKVNCLAWHQN--QGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQ--YEKL 85 (110)
Q Consensus 10 ~~~h~~~v~~~~~~p~--~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l 85 (110)
..+|.+.|.+++|+|+ ++.+++++.||.|++||+.... ......+..|...|.+++|+|+ +..+
T Consensus 49 l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~------------~~~~~~~~~h~~~V~~v~~sp~~~~~~l 116 (753)
T 3jro_A 49 LTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGR------------WSQIAVHAVHSASVNSVQWAPHEYGPLL 116 (753)
T ss_dssp ECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTE------------EEEEEEECCCSSCEEEEEECCGGGCSEE
T ss_pred ccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCc------------ccccccccCCCCCeEEEEECCCCCCCEE
Confidence 3479999999999988 9999999999999999998763 1135566779999999999999 9999
Q ss_pred EEecCCCcEEEEeCCCCC
Q psy11100 86 TSSDETGLIIVWMLYKCN 103 (110)
Q Consensus 86 ~s~~~~~~i~~w~~~~~~ 103 (110)
++++.|+.|++||++++.
T Consensus 117 ~sgs~dg~I~vwdl~~~~ 134 (753)
T 3jro_A 117 LVASSDGKVSVVEFKENG 134 (753)
T ss_dssp EEEETTSEEEEEECCSSS
T ss_pred EEEeCCCcEEEEEeecCC
Confidence 999999999999998773
No 118
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.35 E-value=5e-12 Score=81.81 Aligned_cols=80 Identities=11% Similarity=-0.024 Sum_probs=61.3
Q ss_pred CCCCceEEEEEec---CCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccC---CCeEEEEEcCCCCeE
Q psy11100 12 PNNTKVNCLAWHQ---NQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHS---GKVRAIIWNEQYEKL 85 (110)
Q Consensus 12 ~h~~~v~~~~~~p---~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~s~~~~~l 85 (110)
.|...+..++|+| ++..+++++.|++|++||+.++. .+.++.+|. ..+.+++|+|+|..+
T Consensus 176 ~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk--------------~l~tL~g~~~~v~~v~~vafSpdG~~l 241 (356)
T 2w18_A 176 LMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQ--------------LLKKMHIDDSYQASVCHKAYSEMGLLF 241 (356)
T ss_dssp ECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCC--------------EEEEEECCC---CCCEEEEEEETTEEE
T ss_pred cCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCc--------------EEEEEcCCCcceeeeEEEEECCCCCEE
Confidence 4666677777777 56889999999999999999887 667776543 467788999999876
Q ss_pred ------------EEecCCCcEEEEeCCCCCCh
Q psy11100 86 ------------TSSDETGLIIVWMLYKCNDD 105 (110)
Q Consensus 86 ------------~s~~~~~~i~~w~~~~~~~~ 105 (110)
++++.|+++++||+.+++.+
T Consensus 242 vs~s~~~~~w~laSGs~D~tIklWd~~tgk~l 273 (356)
T 2w18_A 242 IVLSHPCAKESESLRSPVFQLIVINPKTTLSV 273 (356)
T ss_dssp EEEC------------CCEEEEEEETTTTEEE
T ss_pred EEeccCCCcceeeccCCCcEEEEEECCCCEEE
Confidence 56778999999999887643
No 119
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.31 E-value=5.8e-13 Score=86.90 Aligned_cols=80 Identities=14% Similarity=0.122 Sum_probs=59.1
Q ss_pred eEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcC--------CCCeEEEe
Q psy11100 17 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNE--------QYEKLTSS 88 (110)
Q Consensus 17 v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--------~~~~l~s~ 88 (110)
.....+++++..+++++.|+++++||...... . ....+..+.+|.+.|++++|+| +++.|+++
T Consensus 92 ~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~----~-----~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~ 162 (393)
T 4gq1_A 92 GNVNSSPVYSLFLACVCQDNTVRLIITKNETI----I-----TQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASV 162 (393)
T ss_dssp -----CCEEEEEEEEEETTSCEEEEEEETTEE----E-----EEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEE
T ss_pred cceeecCCCCCEEEEEeCCCcEEEEECCCCcc----c-----eeeeecccCCCCCceEEEEEccccccccCCCCCEEEEE
Confidence 33344455677899999999999999987640 0 0012334678999999999998 78899999
Q ss_pred cCCCcEEEEeCCCCCCh
Q psy11100 89 DETGLIIVWMLYKCNDD 105 (110)
Q Consensus 89 ~~~~~i~~w~~~~~~~~ 105 (110)
+.|++|++||++++...
T Consensus 163 s~D~tv~~Wd~~~~~~~ 179 (393)
T 4gq1_A 163 GDDCTLIIWRLTDEGPI 179 (393)
T ss_dssp ETTSEEEEEEEETTEEE
T ss_pred ECCCeEEEEECCCCcee
Confidence 99999999999876543
No 120
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.31 E-value=2.6e-11 Score=79.78 Aligned_cols=79 Identities=19% Similarity=0.331 Sum_probs=67.3
Q ss_pred CCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecCC
Q psy11100 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDET 91 (110)
Q Consensus 12 ~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~ 91 (110)
+|...|.++++ +++.+++|+.|+.+++||..... ....+.+|...|.+++| ++..+++++.|
T Consensus 131 ~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~--------------~~~~~~~h~~~v~~l~~--~~~~l~sg~~d 192 (435)
T 1p22_A 131 ETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLE--------------CKRILTGHTGSVLCLQY--DERVIITGSSD 192 (435)
T ss_dssp SSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCC--------------EEEEECCCSSCEEEEEC--CSSEEEEEETT
T ss_pred CCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCe--------------EEEEEcCCCCcEEEEEE--CCCEEEEEcCC
Confidence 45667887765 89999999999999999998876 66778889999999988 78899999999
Q ss_pred CcEEEEeCCCCCChhhh
Q psy11100 92 GLIIVWMLYKCNDDDEW 108 (110)
Q Consensus 92 ~~i~~w~~~~~~~~~~~ 108 (110)
+.|++||+.+++.+.++
T Consensus 193 g~i~vwd~~~~~~~~~~ 209 (435)
T 1p22_A 193 STVRVWDVNTGEMLNTL 209 (435)
T ss_dssp SCEEEEESSSCCEEEEE
T ss_pred CeEEEEECCCCcEEEEE
Confidence 99999999988765443
No 121
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.28 E-value=3.2e-11 Score=79.41 Aligned_cols=82 Identities=23% Similarity=0.232 Sum_probs=65.9
Q ss_pred ccCCCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEe
Q psy11100 9 IAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSS 88 (110)
Q Consensus 9 ~~~~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 88 (110)
...+|.+.+.. +++++|+.+++|+.|+.+++||+..+. ....+.+|...|.+++|+ +..++++
T Consensus 113 ~l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~~~--------------~~~~~~~h~~~v~~~~~~--~~~l~s~ 175 (445)
T 2ovr_B 113 VLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGK--------------CLRTLVGHTGGVWSSQMR--DNIIISG 175 (445)
T ss_dssp EEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCC--------------EEEECCCCSSCEEEEEEE--TTEEEEE
T ss_pred EecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCCCc--------------EEEEEcCCCCCEEEEEec--CCEEEEE
Confidence 34478887543 356679999999999999999998876 567778888899999886 5688899
Q ss_pred cCCCcEEEEeCCCCCChhh
Q psy11100 89 DETGLIIVWMLYKCNDDDE 107 (110)
Q Consensus 89 ~~~~~i~~w~~~~~~~~~~ 107 (110)
+.|+.|++||+.+++.+.+
T Consensus 176 ~~dg~i~vwd~~~~~~~~~ 194 (445)
T 2ovr_B 176 STDRTLKVWNAETGECIHT 194 (445)
T ss_dssp ETTSCEEEEETTTTEEEEE
T ss_pred eCCCeEEEEECCcCcEEEE
Confidence 9999999999888765443
No 122
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.26 E-value=8.4e-11 Score=77.33 Aligned_cols=83 Identities=16% Similarity=0.281 Sum_probs=70.3
Q ss_pred eccCCCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEE
Q psy11100 8 KIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTS 87 (110)
Q Consensus 8 ~~~~~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s 87 (110)
....+|.+.|.++++ ++..+++++.|+.+++||+.... ....+..|...|.+++| ++..+++
T Consensus 250 ~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~--------------~~~~~~~~~~~v~~~~~--~~~~l~~ 311 (435)
T 1p22_A 250 RVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCE--------------FVRTLNGHKRGIACLQY--RDRLVVS 311 (435)
T ss_dssp EEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCC--------------EEEEEECCSSCEEEEEE--ETTEEEE
T ss_pred eEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCc--------------EEEEEcCCCCcEEEEEe--CCCEEEE
Confidence 344578899999988 78899999999999999999876 66778889999999988 4678999
Q ss_pred ecCCCcEEEEeCCCCCChhhh
Q psy11100 88 SDETGLIIVWMLYKCNDDDEW 108 (110)
Q Consensus 88 ~~~~~~i~~w~~~~~~~~~~~ 108 (110)
++.|+.|++||++++..+.++
T Consensus 312 g~~dg~i~iwd~~~~~~~~~~ 332 (435)
T 1p22_A 312 GSSDNTIRLWDIECGACLRVL 332 (435)
T ss_dssp EETTSCEEEEETTTCCEEEEE
T ss_pred EeCCCeEEEEECCCCCEEEEE
Confidence 999999999999988765543
No 123
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.25 E-value=7.1e-11 Score=77.13 Aligned_cols=81 Identities=9% Similarity=-0.037 Sum_probs=70.1
Q ss_pred CCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeE-EEecC
Q psy11100 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKL-TSSDE 90 (110)
Q Consensus 12 ~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~s~~~ 90 (110)
+|.+.+.+++|+|++..+++++.++.+++||+.... ....+..|...+.+++|+|++..+ +++..
T Consensus 167 ~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 232 (433)
T 3bws_A 167 KKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLA--------------YKATVDLTGKWSKILLYDPIRDLVYCSNWI 232 (433)
T ss_dssp TTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCC--------------EEEEEECSSSSEEEEEEETTTTEEEEEETT
T ss_pred ccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCce--------------EEEEEcCCCCCeeEEEEcCCCCEEEEEecC
Confidence 688899999999999999999999999999998776 556677788899999999999986 56667
Q ss_pred CCcEEEEeCCCCCChh
Q psy11100 91 TGLIIVWMLYKCNDDD 106 (110)
Q Consensus 91 ~~~i~~w~~~~~~~~~ 106 (110)
++.|.+||+++++...
T Consensus 233 ~~~i~~~d~~~~~~~~ 248 (433)
T 3bws_A 233 SEDISVIDRKTKLEIR 248 (433)
T ss_dssp TTEEEEEETTTTEEEE
T ss_pred CCcEEEEECCCCcEEE
Confidence 9999999998876544
No 124
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.22 E-value=9.8e-11 Score=75.47 Aligned_cols=47 Identities=13% Similarity=0.234 Sum_probs=42.0
Q ss_pred eEEeeccCCCeEEEEEcCCCCeEEEecCCCc-EEEEeCCCCCChhhhh
Q psy11100 63 NQSLQGHSGKVRAIIWNEQYEKLTSSDETGL-IIVWMLYKCNDDDEWK 109 (110)
Q Consensus 63 ~~~~~~~~~~v~~~~~s~~~~~l~s~~~~~~-i~~w~~~~~~~~~~~~ 109 (110)
...+.+|...|.+++|+|++..+++++.|++ |++||+++++.+.+++
T Consensus 188 ~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~ 235 (355)
T 3vu4_A 188 GVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFR 235 (355)
T ss_dssp CEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEE
T ss_pred cEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEE
Confidence 4677899999999999999999999999998 9999999988766553
No 125
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.21 E-value=3.6e-10 Score=74.36 Aligned_cols=78 Identities=17% Similarity=0.158 Sum_probs=63.9
Q ss_pred CCCCceEEEEEecCCCEEEEEecCC---cEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEE-E
Q psy11100 12 PNNTKVNCLAWHQNQGWIAVGGDDG---LLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLT-S 87 (110)
Q Consensus 12 ~h~~~v~~~~~~p~~~~l~~~~~~~---~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-s 87 (110)
+|.+.+.+++|+|+|+.+++++.++ .+++||+..+. . ..+..+...+.+++|+|+|+.++ +
T Consensus 176 ~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~--------------~-~~l~~~~~~~~~~~~spdg~~la~~ 240 (415)
T 2hqs_A 176 RSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA--------------V-RQVASFPRHNGAPAFSPDGSKLAFA 240 (415)
T ss_dssp EESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC--------------E-EEEECCSSCEEEEEECTTSSEEEEE
T ss_pred CCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCc--------------E-EEeecCCCcccCEEEcCCCCEEEEE
Confidence 5778999999999999999998775 89999998775 2 34566778899999999999877 6
Q ss_pred ecCCC--cEEEEeCCCCCC
Q psy11100 88 SDETG--LIIVWMLYKCND 104 (110)
Q Consensus 88 ~~~~~--~i~~w~~~~~~~ 104 (110)
++.++ .|++||+.+++.
T Consensus 241 ~~~~g~~~i~~~d~~~~~~ 259 (415)
T 2hqs_A 241 LSKTGSLNLYVMDLASGQI 259 (415)
T ss_dssp ECTTSSCEEEEEETTTCCE
T ss_pred EecCCCceEEEEECCCCCE
Confidence 65554 499999987754
No 126
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.18 E-value=2.9e-10 Score=74.84 Aligned_cols=77 Identities=22% Similarity=0.307 Sum_probs=46.8
Q ss_pred CCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecCC
Q psy11100 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDET 91 (110)
Q Consensus 12 ~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~ 91 (110)
+|.+.+.++++ ++..+++++.|+.+++||+.... ....+..|...|.+++| ++..+++++.|
T Consensus 237 ~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~--------------~~~~~~~~~~~v~~~~~--~~~~l~~~~~d 298 (445)
T 2ovr_B 237 GHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETET--------------CLHTLQGHTNRVYSLQF--DGIHVVSGSLD 298 (445)
T ss_dssp CCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTE--------------EEEEECCCSSCEEEEEE--CSSEEEEEETT
T ss_pred CCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCc--------------EeEEecCCCCceEEEEE--CCCEEEEEeCC
Confidence 34555555544 44455555555555555554443 44556667777777777 66677777777
Q ss_pred CcEEEEeCCCCCChh
Q psy11100 92 GLIIVWMLYKCNDDD 106 (110)
Q Consensus 92 ~~i~~w~~~~~~~~~ 106 (110)
+.|++||+++++.+.
T Consensus 299 ~~i~i~d~~~~~~~~ 313 (445)
T 2ovr_B 299 TSIRVWDVETGNCIH 313 (445)
T ss_dssp SCEEEEETTTCCEEE
T ss_pred CeEEEEECCCCCEEE
Confidence 777777777665443
No 127
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.11 E-value=9.5e-10 Score=70.94 Aligned_cols=79 Identities=4% Similarity=-0.012 Sum_probs=63.0
Q ss_pred CCCceEEEEEecCCCEE-EEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeE-EEecC
Q psy11100 13 NNTKVNCLAWHQNQGWI-AVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKL-TSSDE 90 (110)
Q Consensus 13 h~~~v~~~~~~p~~~~l-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~s~~~ 90 (110)
+...+.+++|+|+++.+ ++++.++.+++||+..+. ....+..+. .+.+++|+|+++.+ +++..
T Consensus 30 ~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~--------------~~~~~~~~~-~v~~~~~spdg~~l~~~~~~ 94 (391)
T 1l0q_A 30 VGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNN--------------VIATVPAGS-SPQGVAVSPDGKQVYVTNMA 94 (391)
T ss_dssp CSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTE--------------EEEEEECSS-SEEEEEECTTSSEEEEEETT
T ss_pred cCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCe--------------EEEEEECCC-CccceEECCCCCEEEEEECC
Confidence 33568999999999876 677789999999998775 445555443 89999999999986 45567
Q ss_pred CCcEEEEeCCCCCChh
Q psy11100 91 TGLIIVWMLYKCNDDD 106 (110)
Q Consensus 91 ~~~i~~w~~~~~~~~~ 106 (110)
++.|.+||+.+++...
T Consensus 95 ~~~v~v~d~~~~~~~~ 110 (391)
T 1l0q_A 95 SSTLSVIDTTSNTVAG 110 (391)
T ss_dssp TTEEEEEETTTTEEEE
T ss_pred CCEEEEEECCCCeEEE
Confidence 7999999999876544
No 128
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.04 E-value=2e-09 Score=77.72 Aligned_cols=78 Identities=14% Similarity=0.101 Sum_probs=66.3
Q ss_pred CCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecCC
Q psy11100 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDET 91 (110)
Q Consensus 12 ~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~ 91 (110)
+|...+..++|+|+|+.+++++.++.+++||+..+. .......|...+..++|||+|+.++.++.+
T Consensus 376 ~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~--------------~~~~~~~~~~~v~~~~~SpDG~~la~~~~~ 441 (1045)
T 1k32_A 376 ENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGK--------------PTVIERSREAMITDFTISDNSRFIAYGFPL 441 (1045)
T ss_dssp CCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCC--------------EEEEEECSSSCCCCEEECTTSCEEEEEEEE
T ss_pred CCccceeeeEECCCCCEEEEECCCCeEEEEECCCCc--------------eEEeccCCCCCccceEECCCCCeEEEEecC
Confidence 677889999999999999999999999999998776 344455788888999999999998877654
Q ss_pred ----------CcEEEEeCCCCC
Q psy11100 92 ----------GLIIVWMLYKCN 103 (110)
Q Consensus 92 ----------~~i~~w~~~~~~ 103 (110)
+.|++||+.+++
T Consensus 442 ~~~~~~~~~~~~i~l~d~~~g~ 463 (1045)
T 1k32_A 442 KHGETDGYVMQAIHVYDMEGRK 463 (1045)
T ss_dssp CSSTTCSCCEEEEEEEETTTTE
T ss_pred ccccccCCCCCeEEEEECCCCc
Confidence 489999998765
No 129
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.04 E-value=3.7e-09 Score=68.15 Aligned_cols=80 Identities=9% Similarity=-0.077 Sum_probs=64.5
Q ss_pred CCCCceEEEEEecCCCEEEEEe---cCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeE-EE
Q psy11100 12 PNNTKVNCLAWHQNQGWIAVGG---DDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKL-TS 87 (110)
Q Consensus 12 ~h~~~v~~~~~~p~~~~l~~~~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l-~s 87 (110)
.+...+.+++|+|+++.+++++ .++.+++||+.... ....+..+ ..+.+++|+|+++.+ ++
T Consensus 197 ~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~--------------~~~~~~~~-~~~~~~~~s~dg~~l~~s 261 (391)
T 1l0q_A 197 KVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNK--------------ITARIPVG-PDPAGIAVTPDGKKVYVA 261 (391)
T ss_dssp ECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTE--------------EEEEEECC-SSEEEEEECTTSSEEEEE
T ss_pred ecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCe--------------EEEEEecC-CCccEEEEccCCCEEEEE
Confidence 3556788999999999888877 68999999998765 44555554 357899999999876 67
Q ss_pred ecCCCcEEEEeCCCCCChh
Q psy11100 88 SDETGLIIVWMLYKCNDDD 106 (110)
Q Consensus 88 ~~~~~~i~~w~~~~~~~~~ 106 (110)
++.++.|++||+.+++.+.
T Consensus 262 ~~~d~~v~v~d~~~~~~~~ 280 (391)
T 1l0q_A 262 LSFXNTVSVIDTATNTITA 280 (391)
T ss_dssp ETTTTEEEEEETTTTEEEE
T ss_pred cCCCCEEEEEECCCCcEEE
Confidence 7889999999999876544
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.00 E-value=1.2e-08 Score=67.08 Aligned_cols=78 Identities=13% Similarity=0.162 Sum_probs=60.7
Q ss_pred CCCCceEEEEEecCCCEEE-EEecCCc--EEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEe
Q psy11100 12 PNNTKVNCLAWHQNQGWIA-VGGDDGL--LKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSS 88 (110)
Q Consensus 12 ~h~~~v~~~~~~p~~~~l~-~~~~~~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 88 (110)
.|.+.+.+++|+|+|+.|+ +++.++. |++||+.... ...+..|...+..++|+|+|+.++.+
T Consensus 220 ~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~---------------~~~l~~~~~~~~~~~~spdg~~l~~~ 284 (415)
T 2hqs_A 220 SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ---------------IRQVTDGRSNNTEPTWFPDSQNLAFT 284 (415)
T ss_dssp CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC---------------EEECCCCSSCEEEEEECTTSSEEEEE
T ss_pred cCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCC---------------EEeCcCCCCcccceEECCCCCEEEEE
Confidence 5677899999999999877 6665554 8899988765 24566677889999999999987776
Q ss_pred cC-CC--cEEEEeCCCCCC
Q psy11100 89 DE-TG--LIIVWMLYKCND 104 (110)
Q Consensus 89 ~~-~~--~i~~w~~~~~~~ 104 (110)
+. ++ .|.+||+.++..
T Consensus 285 s~~~g~~~i~~~d~~~~~~ 303 (415)
T 2hqs_A 285 SDQAGRPQVYKVNINGGAP 303 (415)
T ss_dssp ECTTSSCEEEEEETTSSCC
T ss_pred ECCCCCcEEEEEECCCCCE
Confidence 64 44 677889887653
No 131
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.98 E-value=6e-10 Score=72.75 Aligned_cols=79 Identities=16% Similarity=0.138 Sum_probs=64.7
Q ss_pred CceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeE-----EeeccCCCeEEEEEcCCCCeEEEec
Q psy11100 15 TKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQ-----SLQGHSGKVRAIIWNEQYEKLTSSD 89 (110)
Q Consensus 15 ~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~v~~~~~s~~~~~l~s~~ 89 (110)
..+.+++|+|++.++++++.++.+++||...+. ... .+..|...|.+++|++++..+++++
T Consensus 123 ~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~--------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~ 188 (433)
T 3bws_A 123 FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQ--------------TVRLSPPEKYKKKLGFVETISIPEHNELWVSQM 188 (433)
T ss_dssp SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCC--------------EEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEG
T ss_pred CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCe--------------EeeecCcccccccCCceeEEEEcCCCEEEEEEC
Confidence 446689999977778888888999999998765 222 2346778899999999999999999
Q ss_pred CCCcEEEEeCCCCCChhh
Q psy11100 90 ETGLIIVWMLYKCNDDDE 107 (110)
Q Consensus 90 ~~~~i~~w~~~~~~~~~~ 107 (110)
.++.|++||+.+++...+
T Consensus 189 ~d~~v~~~d~~~~~~~~~ 206 (433)
T 3bws_A 189 QANAVHVFDLKTLAYKAT 206 (433)
T ss_dssp GGTEEEEEETTTCCEEEE
T ss_pred CCCEEEEEECCCceEEEE
Confidence 999999999988766543
No 132
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.92 E-value=7.8e-09 Score=70.28 Aligned_cols=72 Identities=10% Similarity=-0.068 Sum_probs=60.2
Q ss_pred EEEEEecCCCEEEEEecC----CcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecCCC-
Q psy11100 18 NCLAWHQNQGWIAVGGDD----GLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETG- 92 (110)
Q Consensus 18 ~~~~~~p~~~~l~~~~~~----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~~- 92 (110)
.+++|+|||+.+++++.+ +.+++||+..+. ...+..+...+..++|||||+.++++..++
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~---------------~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~ 217 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGG---------------LRVFDSGEGSFSSASISPGMKVTAGLETARE 217 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCC---------------CEEECCSSCEEEEEEECTTSCEEEEEECSSC
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCC---------------ceEeecCCCccccceECCCCCEEEEccCCCe
Confidence 678999999999977766 679999988765 245667778889999999999999888888
Q ss_pred -cEEEEeCCCCCC
Q psy11100 93 -LIIVWMLYKCND 104 (110)
Q Consensus 93 -~i~~w~~~~~~~ 104 (110)
.|++||+.++..
T Consensus 218 ~~i~~~d~~~~~~ 230 (582)
T 3o4h_A 218 ARLVTVDPRDGSV 230 (582)
T ss_dssp EEEEEECTTTCCE
T ss_pred eEEEEEcCCCCcE
Confidence 899999988764
No 133
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.90 E-value=2.5e-08 Score=67.94 Aligned_cols=75 Identities=8% Similarity=0.027 Sum_probs=61.5
Q ss_pred eEEEEEecCCCEEEEEecCCcEEEEEc--CCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcC----CCCeEEEec-
Q psy11100 17 VNCLAWHQNQGWIAVGGDDGLLKVLKL--DTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNE----QYEKLTSSD- 89 (110)
Q Consensus 17 v~~~~~~p~~~~l~~~~~~~~v~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~----~~~~l~s~~- 89 (110)
+..++|+|+|+++++++.++.|.+||+ .+.. ....+. +...+..++|+| +|+.+++++
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~--------------~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~ 245 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPT--------------KVAEIK-IGIEARSVESSKFKGYEDRYTIAGAY 245 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCE--------------EEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEE
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCCCc--------------EEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEc
Confidence 788999999999999999999999999 5544 445555 345678999999 999988877
Q ss_pred CCCcEEEEeCCCCCChh
Q psy11100 90 ETGLIIVWMLYKCNDDD 106 (110)
Q Consensus 90 ~~~~i~~w~~~~~~~~~ 106 (110)
.+++|.+||..+++.+.
T Consensus 246 ~~~~v~v~D~~t~~~~~ 262 (543)
T 1nir_A 246 WPPQFAIMDGETLEPKQ 262 (543)
T ss_dssp ESSEEEEEETTTCCEEE
T ss_pred cCCeEEEEeccccccce
Confidence 48999999988876543
No 134
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.87 E-value=1.9e-08 Score=63.28 Aligned_cols=79 Identities=5% Similarity=-0.073 Sum_probs=61.7
Q ss_pred CCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecCCC
Q psy11100 13 NNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETG 92 (110)
Q Consensus 13 h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~~ 92 (110)
+...+..++|+|+|+.++++ ++.+.+||+.... ....+.. ...+..++|+|+++.++.++.++
T Consensus 239 ~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~--------------~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~ 301 (337)
T 1pby_B 239 MDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNA--------------SIKRVPL-PHSYYSVNVSTDGSTVWLGGALG 301 (337)
T ss_dssp CSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTE--------------EEEEEEC-SSCCCEEEECTTSCEEEEESBSS
T ss_pred CCCceeeEEECCCCCEEEEe--CCeEEEEECCCCc--------------CcceecC-CCceeeEEECCCCCEEEEEcCCC
Confidence 34567789999999988887 6899999998765 3333332 24567899999999888788899
Q ss_pred cEEEEeCCCCCChhhh
Q psy11100 93 LIIVWMLYKCNDDDEW 108 (110)
Q Consensus 93 ~i~~w~~~~~~~~~~~ 108 (110)
.|.+||+.+++.+.++
T Consensus 302 ~i~v~d~~~~~~~~~~ 317 (337)
T 1pby_B 302 DLAAYDAETLEKKGQV 317 (337)
T ss_dssp EEEEEETTTCCEEEEE
T ss_pred cEEEEECcCCcEEEEE
Confidence 9999999988765543
No 135
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.85 E-value=1.9e-08 Score=69.86 Aligned_cols=73 Identities=10% Similarity=0.093 Sum_probs=57.9
Q ss_pred CceEEEEEecCCCEEEEEec-CC-----cEEEEEcCCCCCcCCcccccccceeeeEEeeccC------------------
Q psy11100 15 TKVNCLAWHQNQGWIAVGGD-DG-----LLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHS------------------ 70 (110)
Q Consensus 15 ~~v~~~~~~p~~~~l~~~~~-~~-----~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------ 70 (110)
..+..++|+|||+.|++++. ++ .+++||+..+. .......+.
T Consensus 37 ~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (741)
T 2ecf_A 37 PTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQ--------------TRLLVDSKVVLPGTETLSDEEKARRER 102 (741)
T ss_dssp CCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCC--------------EEEEECGGGTC----------------
T ss_pred CCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCc--------------eeEccchhhcccccccccchhhhhhhh
Confidence 46889999999999999887 87 89999998765 222222221
Q ss_pred ------CCeEEEEEcCCCCeEEEecCCCcEEEEeCCCC
Q psy11100 71 ------GKVRAIIWNEQYEKLTSSDETGLIIVWMLYKC 102 (110)
Q Consensus 71 ------~~v~~~~~s~~~~~l~s~~~~~~i~~w~~~~~ 102 (110)
..+..++|||+|+.++.++. +.|.+||+.++
T Consensus 103 ~~~~~~~~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~ 139 (741)
T 2ecf_A 103 QRIAAMTGIVDYQWSPDAQRLLFPLG-GELYLYDLKQE 139 (741)
T ss_dssp ----CCEESCCCEECTTSSEEEEEET-TEEEEEESSSC
T ss_pred hhhccccCcceeEECCCCCEEEEEeC-CcEEEEECCCC
Confidence 23678999999999888875 89999999887
No 136
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.82 E-value=3.4e-08 Score=60.74 Aligned_cols=80 Identities=6% Similarity=0.013 Sum_probs=60.8
Q ss_pred CCCCceEEEEEecCCCEEEEEe-cCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecC
Q psy11100 12 PNNTKVNCLAWHQNQGWIAVGG-DDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE 90 (110)
Q Consensus 12 ~h~~~v~~~~~~p~~~~l~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 90 (110)
.+...+.++.|+|+|+.++.++ .++.+.+|++..... ....+..+...+..++|+|++..++.++.
T Consensus 170 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~-------------~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 236 (297)
T 2ojh_A 170 HGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGS-------------SVERITDSAYGDWFPHPSPSGDKVVFVSY 236 (297)
T ss_dssp CSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSS-------------CEEECCCCSEEEEEEEECTTSSEEEEEEE
T ss_pred cCCCccccceECCCCCEEEEEecCCCCccEEEECCCCC-------------CcEEEecCCcccCCeEECCCCCEEEEEEc
Confidence 4667899999999999877665 588899998863220 23455566677889999999999877765
Q ss_pred C-----------CcEEEEeCCCCCC
Q psy11100 91 T-----------GLIIVWMLYKCND 104 (110)
Q Consensus 91 ~-----------~~i~~w~~~~~~~ 104 (110)
+ +.|.+||+.+++.
T Consensus 237 ~~~~~~~~~~~~~~l~~~d~~~~~~ 261 (297)
T 2ojh_A 237 DADVFDHPRDLDVRVQLMDMDGGNV 261 (297)
T ss_dssp ETTCCSCCSSEEEEEEEEETTSCSC
T ss_pred CCCCCcccccCceEEEEEecCCCCc
Confidence 4 5699999988754
No 137
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.77 E-value=4.4e-08 Score=60.24 Aligned_cols=77 Identities=14% Similarity=0.107 Sum_probs=56.7
Q ss_pred CCCCceEEEEEecCCCEEEEEecCCcEEEEEcCC-CCCcCCcccccccceeeeEEeecc-CCCeEEEEEcCCCCeEEEec
Q psy11100 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDT-GKESTGQVAAANVNLAMNQSLQGH-SGKVRAIIWNEQYEKLTSSD 89 (110)
Q Consensus 12 ~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~s~~ 89 (110)
.|.+.+.+++|+|+|+.+++++ ++.+++||+.. .. .......+ ...+.+++|+|+++.++.+.
T Consensus 39 ~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~--------------~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 103 (297)
T 2ojh_A 39 QTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPS--------------PEKVDTGFATICNNDHGISPDGALYAISD 103 (297)
T ss_dssp EESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCS--------------CEECCCTTCCCBCSCCEECTTSSEEEEEE
T ss_pred cCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCC--------------ceEeccccccccccceEECCCCCEEEEEE
Confidence 5778899999999999998876 78999999987 64 22333333 36678899999999988887
Q ss_pred --CCCcEEEE--eCCCCC
Q psy11100 90 --ETGLIIVW--MLYKCN 103 (110)
Q Consensus 90 --~~~~i~~w--~~~~~~ 103 (110)
.++...+| +..++.
T Consensus 104 ~~~~~~~~l~~~~~~~~~ 121 (297)
T 2ojh_A 104 KVEFGKSAIYLLPSTGGT 121 (297)
T ss_dssp CTTTSSCEEEEEETTCCC
T ss_pred eCCCCcceEEEEECCCCc
Confidence 33444444 544443
No 138
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.72 E-value=8.9e-08 Score=60.54 Aligned_cols=76 Identities=9% Similarity=-0.060 Sum_probs=59.3
Q ss_pred CceEEEEEec-CCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecCCCc
Q psy11100 15 TKVNCLAWHQ-NQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGL 93 (110)
Q Consensus 15 ~~v~~~~~~p-~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~~~ 93 (110)
..+..++++| +++.++++ ++.+.+||+.... ....+.. ...+..++|+|++..++.++.++.
T Consensus 255 ~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~--------------~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~ 317 (349)
T 1jmx_B 255 ELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRK--------------LIKAANL-DHTYYCVAFDKKGDKLYLGGTFND 317 (349)
T ss_dssp SCEEEEEECSSCTTEEEEE--ESEEEEEETTTTE--------------EEEEEEC-SSCCCEEEECSSSSCEEEESBSSE
T ss_pred CcceeeEecCCCCCEEEEE--cCeEEEEECccCe--------------EEEEEcC-CCCccceEECCCCCEEEEecCCCe
Confidence 4567889999 99988877 7899999998765 3333432 234678999999998777888899
Q ss_pred EEEEeCCCCCChhh
Q psy11100 94 IIVWMLYKCNDDDE 107 (110)
Q Consensus 94 i~~w~~~~~~~~~~ 107 (110)
|.+||..+++.+.+
T Consensus 318 v~v~d~~~~~~~~~ 331 (349)
T 1jmx_B 318 LAVFNPDTLEKVKN 331 (349)
T ss_dssp EEEEETTTTEEEEE
T ss_pred EEEEeccccceeee
Confidence 99999988776544
No 139
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.71 E-value=2.1e-08 Score=68.19 Aligned_cols=74 Identities=9% Similarity=-0.022 Sum_probs=59.6
Q ss_pred CCCCCceEEEEEecCCCEEEEEecCC--cEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEE--------EcC
Q psy11100 11 IPNNTKVNCLAWHQNQGWIAVGGDDG--LLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAII--------WNE 80 (110)
Q Consensus 11 ~~h~~~v~~~~~~p~~~~l~~~~~~~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--------~s~ 80 (110)
..|.+.+..++|+|||+.|+++..++ .|++||+..+. .. .+..+...+..++ |+|
T Consensus 191 ~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~--------------~~-~~~~~~~~~~~~~~~~~~~~~~sp 255 (582)
T 3o4h_A 191 DSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGS--------------VE-DLELPSKDFSSYRPTAITWLGYLP 255 (582)
T ss_dssp CCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCC--------------EE-ECCCSCSHHHHHCCSEEEEEEECT
T ss_pred ecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCc--------------EE-EccCCCcChhhhhhccccceeEcC
Confidence 35778899999999999999888888 78999998765 22 4455555555555 999
Q ss_pred CCCeEEEecCCCcEEEEeC
Q psy11100 81 QYEKLTSSDETGLIIVWML 99 (110)
Q Consensus 81 ~~~~l~s~~~~~~i~~w~~ 99 (110)
+|..+++++.++.+++|++
T Consensus 256 dg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 256 DGRLAVVARREGRSAVFID 274 (582)
T ss_dssp TSCEEEEEEETTEEEEEET
T ss_pred CCcEEEEEEcCCcEEEEEE
Confidence 9988889999999999998
No 140
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.70 E-value=5.3e-08 Score=67.66 Aligned_cols=72 Identities=11% Similarity=0.024 Sum_probs=58.6
Q ss_pred ceEEEEEecCCCEEEEEecCCcEEEEEcCCC---CCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecCCC
Q psy11100 16 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTG---KESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETG 92 (110)
Q Consensus 16 ~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~~ 92 (110)
.+..++|+|||+.|++++. +.+++||+..+ . ...+..+...+..++|||+|+.++.+. ++
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~---------------~~~l~~~~~~~~~~~~SPDG~~la~~~-~~ 172 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAA---------------VRQLTHGEGFATDAKLSPKGGFVSFIR-GR 172 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTS---------------CCBCCCSSSCEEEEEECTTSSEEEEEE-TT
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcce---------------EEEcccCCcccccccCCCCCCEEEEEe-CC
Confidence 3778999999999988876 89999999876 3 133455667899999999999988887 45
Q ss_pred cEEEEeCCCCCC
Q psy11100 93 LIIVWMLYKCND 104 (110)
Q Consensus 93 ~i~~w~~~~~~~ 104 (110)
.|.+||+.++..
T Consensus 173 ~i~~~d~~~g~~ 184 (741)
T 2ecf_A 173 NLWVIDLASGRQ 184 (741)
T ss_dssp EEEEEETTTTEE
T ss_pred cEEEEecCCCCE
Confidence 899999987643
No 141
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.69 E-value=3.2e-07 Score=58.39 Aligned_cols=79 Identities=9% Similarity=0.075 Sum_probs=56.4
Q ss_pred CceEEEEEecCCCEE-EEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEec-CCC
Q psy11100 15 TKVNCLAWHQNQGWI-AVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSD-ETG 92 (110)
Q Consensus 15 ~~v~~~~~~p~~~~l-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-~~~ 92 (110)
..+..++|+|+|+++ ++...++.+.+|++.... .......+..+...+..++|+|+|+.++.++ .++
T Consensus 240 ~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g-----------~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~ 308 (347)
T 3hfq_A 240 NGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADG-----------HLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTD 308 (347)
T ss_dssp CEEEEEEECTTSCEEEEEEETTTEEEEEEECGGG-----------CEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTT
T ss_pred CcceeEEECCCCCEEEEEeCCCCEEEEEEECCCC-----------cEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCC
Confidence 457889999999977 455568899999987321 0113444555556678999999999876665 458
Q ss_pred cEEEE--eCCCCCC
Q psy11100 93 LIIVW--MLYKCND 104 (110)
Q Consensus 93 ~i~~w--~~~~~~~ 104 (110)
.+.+| |..+++.
T Consensus 309 ~v~v~~~d~~tg~l 322 (347)
T 3hfq_A 309 NATLYARDLTSGKL 322 (347)
T ss_dssp EEEEEEECTTTCCE
T ss_pred cEEEEEEeCCCCeE
Confidence 89999 5556653
No 142
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.68 E-value=1.5e-08 Score=70.18 Aligned_cols=75 Identities=11% Similarity=0.125 Sum_probs=59.2
Q ss_pred CceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCC---CeEEEEEcCCCCeEEEecCC
Q psy11100 15 TKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSG---KVRAIIWNEQYEKLTSSDET 91 (110)
Q Consensus 15 ~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~s~~~~~l~s~~~~ 91 (110)
....+++|+|||+++++ +.|+.+++||...+. ....+..+.. .|..++|||+|+.++++..+
T Consensus 17 ~~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~--------------~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~ 81 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYR-EQKGTVRLWNVETNT--------------STVLIEGKKIESLRAIRYEISPDREYALFSYNV 81 (723)
T ss_dssp CCCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCC--------------CEEEECTTTTTTTTCSEEEECTTSSEEEEEESC
T ss_pred ccccccEEcCCCcEEEE-eCCCCEEEEECCCCc--------------EEEEeccccccccccceEEECCCCCEEEEEecC
Confidence 45678899999997766 678999999998875 3344555543 48899999999998888653
Q ss_pred ---------CcEEEEeCCCCCC
Q psy11100 92 ---------GLIIVWMLYKCND 104 (110)
Q Consensus 92 ---------~~i~~w~~~~~~~ 104 (110)
+.+.+||+.++..
T Consensus 82 ~~~~~~~~~~~i~~~d~~~~~~ 103 (723)
T 1xfd_A 82 EPIYQHSYTGYYVLSKIPHGDP 103 (723)
T ss_dssp CCCSSSCCCSEEEEEESSSCCC
T ss_pred ccceeecceeeEEEEECCCCce
Confidence 7788999988764
No 143
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.66 E-value=3.8e-08 Score=68.13 Aligned_cols=64 Identities=9% Similarity=0.047 Sum_probs=45.8
Q ss_pred CCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCC------------------CeE
Q psy11100 13 NNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSG------------------KVR 74 (110)
Q Consensus 13 h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~v~ 74 (110)
|...+..++|+|||+.++.++. +.|++|++..+. .......+.. .+.
T Consensus 112 ~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~--------------~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~ 176 (723)
T 1xfd_A 112 SNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQ--------------AIRVVSTGKEGVIYNGLSDWLYEEEILKTHI 176 (723)
T ss_dssp CSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSC--------------CEEEECCCBTTTEEEEECCHHHHHTTSSSSE
T ss_pred ccccccccEECCCCCEEEEEEC-CeEEEEECCCCc--------------eEEEecCCCCCceECcccceeEEEEeccCcc
Confidence 3345788999999999988875 789999998765 2222222222 237
Q ss_pred EEEEcCCCCeEEEecCC
Q psy11100 75 AIIWNEQYEKLTSSDET 91 (110)
Q Consensus 75 ~~~~s~~~~~l~s~~~~ 91 (110)
.++|||+|+.|++++.+
T Consensus 177 ~~~~SpDg~~la~~~~~ 193 (723)
T 1xfd_A 177 AHWWSPDGTRLAYAAIN 193 (723)
T ss_dssp EEEECTTSSEEEEEEEE
T ss_pred eEEECCCCCEEEEEEEC
Confidence 89999999998877643
No 144
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=98.65 E-value=8e-08 Score=65.45 Aligned_cols=72 Identities=13% Similarity=0.005 Sum_probs=59.5
Q ss_pred EEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecCCCcEEEEeC-
Q psy11100 21 AWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWML- 99 (110)
Q Consensus 21 ~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~~~i~~w~~- 99 (110)
.++|++..+++...++.|.+||...+. ...++..... +..++|+|+|+.+++++.++.|.+||+
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~--------------~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~ 208 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKK--------------IVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLW 208 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCC--------------EEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETT
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCce--------------EEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECc
Confidence 478999889999999999999998876 5566663323 889999999999999999999999999
Q ss_pred -CCCCChhh
Q psy11100 100 -YKCNDDDE 107 (110)
Q Consensus 100 -~~~~~~~~ 107 (110)
.+++.+.+
T Consensus 209 ~~t~~~~~~ 217 (543)
T 1nir_A 209 AKEPTKVAE 217 (543)
T ss_dssp SSSCEEEEE
T ss_pred CCCCcEEEE
Confidence 77665443
No 145
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.65 E-value=3.6e-07 Score=57.88 Aligned_cols=76 Identities=11% Similarity=0.111 Sum_probs=60.5
Q ss_pred eEEEEEecCCCEEEEEe--cCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecCCCcE
Q psy11100 17 VNCLAWHQNQGWIAVGG--DDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLI 94 (110)
Q Consensus 17 v~~~~~~p~~~~l~~~~--~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~~~i 94 (110)
+..++|+|+|+.++.+. .++.+.+||..... ....+..+...+..++|+|++..++.++.++.+
T Consensus 143 ~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~--------------~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i 208 (353)
T 3vgz_A 143 PRELVADDATNTVYISGIGKESVIWVVDGGNIK--------------LKTAIQNTGKMSTGLALDSEGKRLYTTNADGEL 208 (353)
T ss_dssp EEEEEEETTTTEEEEEEESSSCEEEEEETTTTE--------------EEEEECCCCTTCCCCEEETTTTEEEEECTTSEE
T ss_pred CceEEECCCCCEEEEEecCCCceEEEEcCCCCc--------------eEEEecCCCCccceEEECCCCCEEEEEcCCCeE
Confidence 67899999998776665 47889999998775 444454455557889999999998888889999
Q ss_pred EEEeCCCCCChh
Q psy11100 95 IVWMLYKCNDDD 106 (110)
Q Consensus 95 ~~w~~~~~~~~~ 106 (110)
.+||..+++...
T Consensus 209 ~~~d~~~~~~~~ 220 (353)
T 3vgz_A 209 ITIDTADNKILS 220 (353)
T ss_dssp EEEETTTTEEEE
T ss_pred EEEECCCCeEEE
Confidence 999998876543
No 146
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.65 E-value=6.8e-08 Score=67.04 Aligned_cols=70 Identities=11% Similarity=0.149 Sum_probs=55.8
Q ss_pred eEEEEEecCCCEEEEEec---------CCcEEEEEcCCCCCcCCcccccccceeee--EEeeccCCCeEEEEEcCCCCeE
Q psy11100 17 VNCLAWHQNQGWIAVGGD---------DGLLKVLKLDTGKESTGQVAAANVNLAMN--QSLQGHSGKVRAIIWNEQYEKL 85 (110)
Q Consensus 17 v~~~~~~p~~~~l~~~~~---------~~~v~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~s~~~~~l 85 (110)
+.+++|+|||+.|++++. ++.+++||+..+. .. ..+ ...+..++|||+|+.|
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~--------------~~~~~~l---~~~~~~~~~SPDG~~l 124 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGE--------------FVRGNEL---PRPIQYLCWSPVGSKL 124 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTE--------------ECCSSCC---CSSBCCEEECSSTTCE
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCc--------------cccceec---CcccccceECCCCCEE
Confidence 789999999999988876 6899999998765 10 111 2457789999999999
Q ss_pred EEecCCCcEEEEeCCCCCC
Q psy11100 86 TSSDETGLIIVWMLYKCND 104 (110)
Q Consensus 86 ~s~~~~~~i~~w~~~~~~~ 104 (110)
+.+. ++.|++|++.++..
T Consensus 125 a~~~-~~~i~~~~~~~g~~ 142 (719)
T 1z68_A 125 AYVY-QNNIYLKQRPGDPP 142 (719)
T ss_dssp EEEE-TTEEEEESSTTSCC
T ss_pred EEEE-CCeEEEEeCCCCCc
Confidence 8885 77999999987654
No 147
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.64 E-value=2.5e-07 Score=58.36 Aligned_cols=78 Identities=9% Similarity=-0.061 Sum_probs=57.1
Q ss_pred CCceEEEEEecCCCEEEEEec-CCcEEEEEcCCCCCcCCcccccccceee-eEEeeccCCCeEEEEEcCCCCeEEEecCC
Q psy11100 14 NTKVNCLAWHQNQGWIAVGGD-DGLLKVLKLDTGKESTGQVAAANVNLAM-NQSLQGHSGKVRAIIWNEQYEKLTSSDET 91 (110)
Q Consensus 14 ~~~v~~~~~~p~~~~l~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~s~~~~~l~s~~~~ 91 (110)
...+ .++|+|+|+.+++++. ++.+.+||..... . ...+..+.....+++|+|+++.++....+
T Consensus 40 ~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~--------------~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~ 104 (331)
T 3u4y_A 40 YDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEP--------------PKVVAIQEGQSSMADVDITPDDQFAVTVTGL 104 (331)
T ss_dssp CCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSS--------------CEEEEEEECSSCCCCEEECTTSSEEEECCCS
T ss_pred CCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCc--------------eeEEecccCCCCccceEECCCCCEEEEecCC
Confidence 3455 8999999996655554 8899999998775 2 34444455555459999999998855544
Q ss_pred C---cEEEEeCCCCCChh
Q psy11100 92 G---LIIVWMLYKCNDDD 106 (110)
Q Consensus 92 ~---~i~~w~~~~~~~~~ 106 (110)
+ .|.+||+.++..+.
T Consensus 105 ~~~~~i~v~d~~~~~~~~ 122 (331)
T 3u4y_A 105 NHPFNMQSYSFLKNKFIS 122 (331)
T ss_dssp SSSCEEEEEETTTTEEEE
T ss_pred CCcccEEEEECCCCCeEE
Confidence 3 89999998876544
No 148
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.63 E-value=8.4e-08 Score=61.74 Aligned_cols=71 Identities=15% Similarity=0.176 Sum_probs=54.1
Q ss_pred EEEecCCCEEEEEec-CCc--EEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecCCCcEEE
Q psy11100 20 LAWHQNQGWIAVGGD-DGL--LKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIV 96 (110)
Q Consensus 20 ~~~~p~~~~l~~~~~-~~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~~~i~~ 96 (110)
.+|+|||+.|+..+. ++. +.+||+..+. .......+...+...+|+|+|+.|+.+..+..|++
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~--------------~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~ 106 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQV--------------ATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMR 106 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCE--------------EEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEE
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCc--------------eEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEE
Confidence 789999999888876 663 7778887765 33333344444446789999999999998899999
Q ss_pred EeCCCCCC
Q psy11100 97 WMLYKCND 104 (110)
Q Consensus 97 w~~~~~~~ 104 (110)
||+.++..
T Consensus 107 ~d~~~g~~ 114 (388)
T 3pe7_A 107 VDLATLEE 114 (388)
T ss_dssp EETTTCCE
T ss_pred EECCCCcc
Confidence 99988764
No 149
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.61 E-value=4.1e-07 Score=57.60 Aligned_cols=80 Identities=11% Similarity=0.004 Sum_probs=61.0
Q ss_pred CCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeec----cCCCeEEEEEcCCCCeEEE-
Q psy11100 13 NNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQG----HSGKVRAIIWNEQYEKLTS- 87 (110)
Q Consensus 13 h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~s- 87 (110)
+...+..++|+|+|+.++.++.++.+.+||..... ....+.. +...+..++|+|++..++.
T Consensus 183 ~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~--------------~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 248 (353)
T 3vgz_A 183 TGKMSTGLALDSEGKRLYTTNADGELITIDTADNK--------------ILSRKKLLDDGKEHFFINISLDTARQRAFIT 248 (353)
T ss_dssp CCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTE--------------EEEEEECCCSSSCCCEEEEEEETTTTEEEEE
T ss_pred CCCccceEEECCCCCEEEEEcCCCeEEEEECCCCe--------------EEEEEEcCCCCCCcccceEEECCCCCEEEEE
Confidence 33447788999999999999999999999998765 3333332 3456788999999997554
Q ss_pred ecCCCcEEEEeCCCCCChh
Q psy11100 88 SDETGLIIVWMLYKCNDDD 106 (110)
Q Consensus 88 ~~~~~~i~~w~~~~~~~~~ 106 (110)
...++.|.+||+.+++...
T Consensus 249 ~~~~~~v~~~d~~~~~~~~ 267 (353)
T 3vgz_A 249 DSKAAEVLVVDTRNGNILA 267 (353)
T ss_dssp ESSSSEEEEEETTTCCEEE
T ss_pred eCCCCEEEEEECCCCcEEE
Confidence 4456899999998887644
No 150
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.61 E-value=4e-07 Score=57.31 Aligned_cols=76 Identities=13% Similarity=0.065 Sum_probs=56.2
Q ss_pred CCCCceEEEEEecCCCEEEEEecC-CcEEEEEcC--CCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEe
Q psy11100 12 PNNTKVNCLAWHQNQGWIAVGGDD-GLLKVLKLD--TGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSS 88 (110)
Q Consensus 12 ~h~~~v~~~~~~p~~~~l~~~~~~-~~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 88 (110)
.+...+..++|+|+|+.+++++.+ +.+.+|++. .+. ......+..+. .+..++|+|+++.++.+
T Consensus 35 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~------------~~~~~~~~~~~-~~~~~~~s~dg~~l~~~ 101 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGA------------LTFAAESALPG-SLTHISTDHQGQFVFVG 101 (343)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCC------------EEEEEEEECSS-CCSEEEECTTSSEEEEE
T ss_pred ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCc------------eeeccccccCC-CCcEEEEcCCCCEEEEE
Confidence 466778889999999988888776 899999997 332 11223333333 77899999999976555
Q ss_pred -cCCCcEEEEeCC
Q psy11100 89 -DETGLIIVWMLY 100 (110)
Q Consensus 89 -~~~~~i~~w~~~ 100 (110)
..++.|.+||+.
T Consensus 102 ~~~~~~i~~~d~~ 114 (343)
T 1ri6_A 102 SYNAGNVSVTRLE 114 (343)
T ss_dssp ETTTTEEEEEEEE
T ss_pred ecCCCeEEEEECC
Confidence 458889999984
No 151
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.60 E-value=6.3e-08 Score=67.02 Aligned_cols=77 Identities=10% Similarity=0.085 Sum_probs=56.1
Q ss_pred CCCCceEEEEEecCCCEEEEEecCCcEEEEEcCC-----CCCcCCcccccccceeeeEEeeccC--------------CC
Q psy11100 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDT-----GKESTGQVAAANVNLAMNQSLQGHS--------------GK 72 (110)
Q Consensus 12 ~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~ 72 (110)
.+.+.+..++|+|||+.++++ .++.|++|++.. +. .......+. ..
T Consensus 118 ~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~--------------~~~~~~~~~~~~~~g~~~~~ee~~~ 182 (706)
T 2z3z_A 118 DTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSR--------------AIAVTIDGTETLVYGQAVHQREFGI 182 (706)
T ss_dssp CCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCC--------------CEESCSCCBTTEEESSCCGGGCTTC
T ss_pred CCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCC--------------cEEeccCCCCCeEcccchhhhhcCC
Confidence 355678889999999998885 678999999987 53 111111111 22
Q ss_pred eEEEEEcCCCCeEEEec---------------------------------CCCcEEEEeCCCCC
Q psy11100 73 VRAIIWNEQYEKLTSSD---------------------------------ETGLIIVWMLYKCN 103 (110)
Q Consensus 73 v~~~~~s~~~~~l~s~~---------------------------------~~~~i~~w~~~~~~ 103 (110)
+..++|||+|+.|++++ .+..|.+||+.++.
T Consensus 183 ~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~ 246 (706)
T 2z3z_A 183 EKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGK 246 (706)
T ss_dssp CCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTE
T ss_pred CceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCc
Confidence 57899999999988876 44679999998765
No 152
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.59 E-value=2.1e-07 Score=64.41 Aligned_cols=72 Identities=11% Similarity=0.102 Sum_probs=54.8
Q ss_pred eEEEEEecCCCEEEEEe---------------------------------cCCcEEEEEcCCCCCcCCcccccccceeee
Q psy11100 17 VNCLAWHQNQGWIAVGG---------------------------------DDGLLKVLKLDTGKESTGQVAAANVNLAMN 63 (110)
Q Consensus 17 v~~~~~~p~~~~l~~~~---------------------------------~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 63 (110)
+.++.|+|||+.|++++ .+..+++||+..+. ..
T Consensus 183 ~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~--------------~~ 248 (706)
T 2z3z_A 183 EKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGK--------------TV 248 (706)
T ss_dssp CCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTE--------------EE
T ss_pred CceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCc--------------eE
Confidence 47899999999998887 33568889987664 11
Q ss_pred EEe--eccCCCeEEEEEcCCCCeEEEecCCC-----cEEEEeCCCC
Q psy11100 64 QSL--QGHSGKVRAIIWNEQYEKLTSSDETG-----LIIVWMLYKC 102 (110)
Q Consensus 64 ~~~--~~~~~~v~~~~~s~~~~~l~s~~~~~-----~i~~w~~~~~ 102 (110)
... ..+...+..++|+|+|+.++.++.+. .|.+||+.++
T Consensus 249 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g 294 (706)
T 2z3z_A 249 YLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETG 294 (706)
T ss_dssp ECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTC
T ss_pred eeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCC
Confidence 111 24556789999999999888766554 8999999887
No 153
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.57 E-value=3.8e-07 Score=66.03 Aligned_cols=77 Identities=16% Similarity=0.054 Sum_probs=58.9
Q ss_pred CCCCceEEEEEecCCCEEEEEecC------CcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCe-------EEEEE
Q psy11100 12 PNNTKVNCLAWHQNQGWIAVGGDD------GLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKV-------RAIIW 78 (110)
Q Consensus 12 ~h~~~v~~~~~~p~~~~l~~~~~~------~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-------~~~~~ 78 (110)
.|.+.+.+++|||||+.|+.++.+ ..|++|++..+. ...+..|...+ ..++|
T Consensus 50 ~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~---------------~~~lt~~~~~~~~~~~~~~~~~~ 114 (1045)
T 1k32_A 50 SNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGE---------------IKRITYFSGKSTGRRMFTDVAGF 114 (1045)
T ss_dssp CSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTE---------------EEECCCCCEEEETTEECSEEEEE
T ss_pred eCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCC---------------eEEcccCCCcccccccccccccC
Confidence 688899999999999999887543 368899987654 34566666666 89999
Q ss_pred cCCCCeEEEecCC------CcEEEEeCCCCC
Q psy11100 79 NEQYEKLTSSDET------GLIIVWMLYKCN 103 (110)
Q Consensus 79 s~~~~~l~s~~~~------~~i~~w~~~~~~ 103 (110)
+|+|+.+++++.+ ..|..|++.++.
T Consensus 115 SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~ 145 (1045)
T 1k32_A 115 DPDGNLIISTDAMQPFSSMTCLYRVENDGIN 145 (1045)
T ss_dssp CTTCCEEEEECTTSSSTTCCEEEEEEGGGTE
T ss_pred CCCCEEEEEECCcCCCcccceEEEEECCCCC
Confidence 9999976666643 358888876654
No 154
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.56 E-value=2.4e-06 Score=54.68 Aligned_cols=81 Identities=12% Similarity=0.048 Sum_probs=55.0
Q ss_pred CCCceEEEEEecCCCEEEEEecC--CcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEec-
Q psy11100 13 NNTKVNCLAWHQNQGWIAVGGDD--GLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSD- 89 (110)
Q Consensus 13 h~~~v~~~~~~p~~~~l~~~~~~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~- 89 (110)
+......++|+|+|++|+.+..+ +.+.+|++.... +. +..+..+.. ...+..++|+|+|++++.++
T Consensus 257 ~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~---g~-------~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~ 325 (361)
T 3scy_A 257 NAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETN---GT-------LTKVGYQLT-GIHPRNFIITPNGKYLLVACR 325 (361)
T ss_dssp CCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTT---CC-------EEEEEEEEC-SSCCCEEEECTTSCEEEEEET
T ss_pred CCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCC---Cc-------EEEeeEecC-CCCCceEEECCCCCEEEEEEC
Confidence 33456799999999988666554 889999986321 00 112233333 45677899999999877666
Q ss_pred CCCcEEEE--eCCCCCC
Q psy11100 90 ETGLIIVW--MLYKCND 104 (110)
Q Consensus 90 ~~~~i~~w--~~~~~~~ 104 (110)
.++.+.+| |..+++.
T Consensus 326 ~~~~v~v~~~d~~~g~~ 342 (361)
T 3scy_A 326 DTNVIQIFERDQATGLL 342 (361)
T ss_dssp TTTEEEEEEECTTTCCE
T ss_pred CCCCEEEEEEECCCCcE
Confidence 67889996 5555553
No 155
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.55 E-value=9.1e-07 Score=55.66 Aligned_cols=75 Identities=9% Similarity=0.064 Sum_probs=52.3
Q ss_pred CceEEEEEecCCCEEE-EEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEec-CCC
Q psy11100 15 TKVNCLAWHQNQGWIA-VGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSD-ETG 92 (110)
Q Consensus 15 ~~v~~~~~~p~~~~l~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-~~~ 92 (110)
..+..++|+|+|+.++ +...++.+.+|++.... + .......+..+.. +..++|+|++..++.++ .++
T Consensus 231 ~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~---~-------~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~ 299 (343)
T 1ri6_A 231 RWAADIHITPDGRHLYACDRTASLITVFSVSEDG---S-------VLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSH 299 (343)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEEECTTS---C-------CEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTC
T ss_pred CCccceEECCCCCEEEEEecCCCEEEEEEEcCCC---C-------ceEEeeeecCCCc-cceEEECCCCCEEEEecCCCC
Confidence 3566899999998776 44578999999998321 0 0112333433333 78899999999876666 689
Q ss_pred cEEEEeCC
Q psy11100 93 LIIVWMLY 100 (110)
Q Consensus 93 ~i~~w~~~ 100 (110)
.+.+|++.
T Consensus 300 ~v~v~~~d 307 (343)
T 1ri6_A 300 HISVYEIV 307 (343)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEEc
Confidence 99999543
No 156
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.53 E-value=5.6e-07 Score=62.72 Aligned_cols=77 Identities=13% Similarity=0.171 Sum_probs=55.6
Q ss_pred CCCCceEEEEEecCCCEEEEEecCC-----cEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEE
Q psy11100 12 PNNTKVNCLAWHQNQGWIAVGGDDG-----LLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLT 86 (110)
Q Consensus 12 ~h~~~v~~~~~~p~~~~l~~~~~~~-----~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 86 (110)
+|+..+..++|||||+.|+.+..++ .|++||+..+. ....... ...+..++|+|||+.|+
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~--------------~~~~~~~-~~~~~~~~wspDg~~l~ 186 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAK--------------ELPDVLE-RVKFSCMAWTHDGKGMF 186 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTE--------------EEEEEEE-EECSCCEEECTTSSEEE
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCC--------------CCccccc-CcccceEEEEeCCCEEE
Confidence 4445688899999999988765533 79999998875 2221111 12256799999999988
Q ss_pred EecCCCc----------------EEEEeCCCCC
Q psy11100 87 SSDETGL----------------IIVWMLYKCN 103 (110)
Q Consensus 87 s~~~~~~----------------i~~w~~~~~~ 103 (110)
.+..+.. |++|++.+++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~ 219 (710)
T 2xdw_A 187 YNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQ 219 (710)
T ss_dssp EEECCCCSSCCSSSCCCCCCCCEEEEEETTSCG
T ss_pred EEEECCccccccccccccCCCCEEEEEECCCCc
Confidence 7776654 9999998775
No 157
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.53 E-value=1.3e-06 Score=55.51 Aligned_cols=77 Identities=9% Similarity=0.120 Sum_probs=55.3
Q ss_pred CCCceEEEEEecCCCEEEEEe-cCCcEEEEEcCCCCCcCCcccccccceeeeEEeec---------cCCCeEEEEEcCCC
Q psy11100 13 NNTKVNCLAWHQNQGWIAVGG-DDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQG---------HSGKVRAIIWNEQY 82 (110)
Q Consensus 13 h~~~v~~~~~~p~~~~l~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~v~~~~~s~~~ 82 (110)
+...+..++|+|+|+.+++++ .++.+.+|++.... .. ..+..+.. ....+..++|+|+|
T Consensus 84 ~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g----~~-------~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg 152 (347)
T 3hfq_A 84 PGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADG----AL-------TLTDTVQHSGHGPRPEQDGSHIHYTDLTPDN 152 (347)
T ss_dssp ESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTS----CE-------EEEEEEECCCCCSSTTCSSCCEEEEEECTTS
T ss_pred CCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCC----Ce-------eecceeecCCCCCCccccCCCceEEEECCCC
Confidence 456778899999999888777 67899999996422 00 01122211 12347889999999
Q ss_pred CeEEEecCCCcEEEEeCC
Q psy11100 83 EKLTSSDETGLIIVWMLY 100 (110)
Q Consensus 83 ~~l~s~~~~~~i~~w~~~ 100 (110)
+++++...++.|.+|++.
T Consensus 153 ~l~v~~~~~~~v~~~~~~ 170 (347)
T 3hfq_A 153 RLAVIDLGSDKVYVYNVS 170 (347)
T ss_dssp CEEEEETTTTEEEEEEEC
T ss_pred cEEEEeCCCCEEEEEEEC
Confidence 976676778899999998
No 158
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.52 E-value=3.4e-07 Score=64.13 Aligned_cols=71 Identities=11% Similarity=0.054 Sum_probs=56.3
Q ss_pred EEEEEecCCCEEEEEecC---------CcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEe
Q psy11100 18 NCLAWHQNQGWIAVGGDD---------GLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSS 88 (110)
Q Consensus 18 ~~~~~~p~~~~l~~~~~~---------~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 88 (110)
...+|||||+.|+.++.+ +.+.+||+..+. ...+..+...+...+|||||+.++.+
T Consensus 65 ~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~---------------~~~l~~~~~~~~~~~~SPdG~~la~~ 129 (740)
T 4a5s_A 65 NDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQ---------------LITEERIPNNTQWVTWSPVGHKLAYV 129 (740)
T ss_dssp CEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTE---------------ECCSSCCCTTEEEEEECSSTTCEEEE
T ss_pred cceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCc---------------EEEcccCCCcceeeEECCCCCEEEEE
Confidence 347899999999888765 456799999875 23345566789999999999999888
Q ss_pred cCCCcEEEEeCCCCCC
Q psy11100 89 DETGLIIVWMLYKCND 104 (110)
Q Consensus 89 ~~~~~i~~w~~~~~~~ 104 (110)
. ++.|++|++.++..
T Consensus 130 ~-~~~i~~~~~~~~~~ 144 (740)
T 4a5s_A 130 W-NNDIYVKIEPNLPS 144 (740)
T ss_dssp E-TTEEEEESSTTSCC
T ss_pred E-CCeEEEEECCCCce
Confidence 5 68999999887653
No 159
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.51 E-value=5.9e-07 Score=56.40 Aligned_cols=73 Identities=10% Similarity=0.016 Sum_probs=55.9
Q ss_pred ceEEEEEecCCCEEEEEe------------cCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCC
Q psy11100 16 KVNCLAWHQNQGWIAVGG------------DDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYE 83 (110)
Q Consensus 16 ~v~~~~~~p~~~~l~~~~------------~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 83 (110)
.+..++|+|+|+.++++. .++.+.+||..... ....+.. ...+..++|+|++.
T Consensus 83 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~--------------~~~~~~~-~~~~~~~~~s~dg~ 147 (337)
T 1pby_B 83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLS--------------RRKAFEA-PRQITMLAWARDGS 147 (337)
T ss_dssp CTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTE--------------EEEEEEC-CSSCCCEEECTTSS
T ss_pred cccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCc--------------EEEEEeC-CCCcceeEECCCCC
Confidence 566789999999888775 57899999998764 3333333 34567889999999
Q ss_pred eEEEecCCCcEEEEeCCCCCCh
Q psy11100 84 KLTSSDETGLIIVWMLYKCNDD 105 (110)
Q Consensus 84 ~l~s~~~~~~i~~w~~~~~~~~ 105 (110)
.++.+ ++.|.+||+.+++..
T Consensus 148 ~l~~~--~~~i~~~d~~~~~~~ 167 (337)
T 1pby_B 148 KLYGL--GRDLHVMDPEAGTLV 167 (337)
T ss_dssp CEEEE--SSSEEEEETTTTEEE
T ss_pred EEEEe--CCeEEEEECCCCcEe
Confidence 87776 688999999887654
No 160
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.50 E-value=5.7e-07 Score=56.82 Aligned_cols=74 Identities=8% Similarity=-0.042 Sum_probs=54.7
Q ss_pred ceEEEEEecCCCEE-EEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeecc------CCCeEEEEEcCCCCeEEEe
Q psy11100 16 KVNCLAWHQNQGWI-AVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGH------SGKVRAIIWNEQYEKLTSS 88 (110)
Q Consensus 16 ~v~~~~~~p~~~~l-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~v~~~~~s~~~~~l~s~ 88 (110)
.+..++|+|+|+.+ ++...++.+.+||+.... ....+... ...+..++|+|+|+.++.+
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~--------------~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~ 109 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCK--------------NTFHANLSSVPGEVGRSMYSFAISPDGKEVYAT 109 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTTE--------------EEEEEESCCSTTEEEECSSCEEECTTSSEEEEE
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCc--------------EEEEEEcccccccccccccceEECCCCCEEEEE
Confidence 57789999999865 455568899999998765 23333321 2236789999999998877
Q ss_pred cCC------------CcEEEEeCCCCC
Q psy11100 89 DET------------GLIIVWMLYKCN 103 (110)
Q Consensus 89 ~~~------------~~i~~w~~~~~~ 103 (110)
+.+ +.|.+||+.+++
T Consensus 110 ~~~~~~~~~~~~~~~~~i~~~d~~~~~ 136 (349)
T 1jmx_B 110 VNPTQRLNDHYVVKPPRLEVFSTADGL 136 (349)
T ss_dssp EEEEEECSSCEEECCCEEEEEEGGGGG
T ss_pred cccccccccccccCCCeEEEEECCCcc
Confidence 754 899999998754
No 161
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.48 E-value=2.2e-07 Score=64.53 Aligned_cols=72 Identities=11% Similarity=0.135 Sum_probs=55.4
Q ss_pred EEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCC---CeEEEEEcCCCCeEEEecC----
Q psy11100 18 NCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSG---KVRAIIWNEQYEKLTSSDE---- 90 (110)
Q Consensus 18 ~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~s~~~~~l~s~~~---- 90 (110)
..++|+|+|+++++ +.++.+++||+..+. ....+..+.. .+..++|||||+.+++++.
T Consensus 19 ~~~~~s~dg~~~~~-~~d~~i~~~~~~~g~--------------~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~ 83 (719)
T 1z68_A 19 FFPNWISGQEYLHQ-SADNNIVLYNIETGQ--------------SYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKL 83 (719)
T ss_dssp CCCEESSSSEEEEE-CTTSCEEEEESSSCC--------------EEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEEC
T ss_pred CccEECCCCeEEEE-cCCCCEEEEEcCCCc--------------EEEEEccccccccceeeEEECCCCCeEEEEecCcee
Confidence 36799999965554 468999999999876 3344444432 3889999999999888765
Q ss_pred -----CCcEEEEeCCCCCC
Q psy11100 91 -----TGLIIVWMLYKCND 104 (110)
Q Consensus 91 -----~~~i~~w~~~~~~~ 104 (110)
++.|++||+.+++.
T Consensus 84 ~~~s~~~~i~~~d~~~g~~ 102 (719)
T 1z68_A 84 WRYSYTATYYIYDLSNGEF 102 (719)
T ss_dssp SSSCEEEEEEEEETTTTEE
T ss_pred EEeecceEEEEEECCCCcc
Confidence 68999999988765
No 162
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.48 E-value=2.9e-06 Score=54.29 Aligned_cols=78 Identities=10% Similarity=0.100 Sum_probs=55.0
Q ss_pred CCCCCceEEEEEecCCCEEEEEe-cCCcEEEEEcCCCCCcCCcccccccceeeeEEe---eccCCCeEEEEEcCCCCeEE
Q psy11100 11 IPNNTKVNCLAWHQNQGWIAVGG-DDGLLKVLKLDTGKESTGQVAAANVNLAMNQSL---QGHSGKVRAIIWNEQYEKLT 86 (110)
Q Consensus 11 ~~h~~~v~~~~~~p~~~~l~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~s~~~~~l~ 86 (110)
..+......++|+|+|++++.++ .++.+.+|++..+. +.....+ ..+......++|+|+|+.++
T Consensus 207 ~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~------------~~~~~~~~~~~~~~~~~~~i~~spdg~~l~ 274 (361)
T 3scy_A 207 VAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGM------------LDEIQTVAADTVNAQGSGDIHLSPDGKYLY 274 (361)
T ss_dssp CCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTE------------EEEEEEEESCSSCCCCEEEEEECTTSSEEE
T ss_pred cCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCc------------eEEeEEEecCCCCCCCcccEEECCCCCEEE
Confidence 34445678899999999876666 68899999998543 0011222 22334567999999999875
Q ss_pred Eec-C-CCcEEEEeCC
Q psy11100 87 SSD-E-TGLIIVWMLY 100 (110)
Q Consensus 87 s~~-~-~~~i~~w~~~ 100 (110)
.++ . ++.|.+|++.
T Consensus 275 v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 275 ASNRLKADGVAIFKVD 290 (361)
T ss_dssp EEECSSSCEEEEEEEC
T ss_pred EECCCCCCEEEEEEEc
Confidence 554 4 5889999985
No 163
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.47 E-value=1.6e-06 Score=59.67 Aligned_cols=81 Identities=14% Similarity=0.055 Sum_probs=56.3
Q ss_pred CCCCceEEEEEecCCCEEEEEecC--------CcEEEEEcC-CCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCC
Q psy11100 12 PNNTKVNCLAWHQNQGWIAVGGDD--------GLLKVLKLD-TGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQY 82 (110)
Q Consensus 12 ~h~~~v~~~~~~p~~~~l~~~~~~--------~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 82 (110)
.+...+..++|+|||+.|+..+.+ ..|++||+. .+. .. ........+...+..++|+|+|
T Consensus 185 ~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~----~~-------~~~~l~~~~~~~~~~~~~spdg 253 (662)
T 3azo_A 185 DAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGR----FA-------DTRTLLGGPEEAIAQAEWAPDG 253 (662)
T ss_dssp SCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSC----EE-------EEEEEEEETTBCEEEEEECTTS
T ss_pred cCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCc----cc-------ccEEeCCCCCceEcceEECCCC
Confidence 344667788999999999877654 368999988 441 00 0222333456788999999999
Q ss_pred CeEEEecCCC--cEEEEeCCCCC
Q psy11100 83 EKLTSSDETG--LIIVWMLYKCN 103 (110)
Q Consensus 83 ~~l~s~~~~~--~i~~w~~~~~~ 103 (110)
+++++++.++ .|..||+.++.
T Consensus 254 ~l~~~~~~~~~~~l~~~~~~~~~ 276 (662)
T 3azo_A 254 SLIVATDRTGWWNLHRVDPATGA 276 (662)
T ss_dssp CEEEEECTTSSCEEEEECTTTCC
T ss_pred eEEEEECCCCCeEEEEEECCCCc
Confidence 9877777777 56666765554
No 164
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=98.46 E-value=1.6e-06 Score=54.68 Aligned_cols=79 Identities=5% Similarity=0.042 Sum_probs=56.5
Q ss_pred CCceEEEEEecCCCEE-EEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEE-EecCC
Q psy11100 14 NTKVNCLAWHQNQGWI-AVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLT-SSDET 91 (110)
Q Consensus 14 ~~~v~~~~~~p~~~~l-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-s~~~~ 91 (110)
......++|+|+|+.+ ++...++.+.+||+.... . ......+.. ...+..++|+|+|+.++ +...+
T Consensus 175 ~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~----~-------~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~ 242 (331)
T 3u4y_A 175 GTRPFNITFTPDGNFAFVANLIGNSIGILETQNPE----N-------ITLLNAVGT-NNLPGTIVVSRDGSTVYVLTEST 242 (331)
T ss_dssp SSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTT----S-------CEEEEEEEC-SSCCCCEEECTTSSEEEEECSSE
T ss_pred CCCccceEECCCCCEEEEEeCCCCeEEEEECCCCc----c-------cceeeeccC-CCCCceEEECCCCCEEEEEEcCC
Confidence 3557889999999865 445568899999998765 0 001333433 35667899999999754 44567
Q ss_pred CcEEEEeCCCCCC
Q psy11100 92 GLIIVWMLYKCND 104 (110)
Q Consensus 92 ~~i~~w~~~~~~~ 104 (110)
+.|.+||+.+++.
T Consensus 243 ~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 243 VDVFNFNQLSGTL 255 (331)
T ss_dssp EEEEEEETTTTEE
T ss_pred CEEEEEECCCCce
Confidence 8899999988765
No 165
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.42 E-value=4.4e-07 Score=63.14 Aligned_cols=76 Identities=17% Similarity=0.209 Sum_probs=54.9
Q ss_pred CCCCceEEEEEecCCCEEEEE-----ecCCcEEEEEcCCCCCcCCcccccccceeee--EEeeccCCCeEEEEEcCCCCe
Q psy11100 12 PNNTKVNCLAWHQNQGWIAVG-----GDDGLLKVLKLDTGKESTGQVAAANVNLAMN--QSLQGHSGKVRAIIWNEQYEK 84 (110)
Q Consensus 12 ~h~~~v~~~~~~p~~~~l~~~-----~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~s~~~~~ 84 (110)
+|+..+..++|||||+.|+.+ +.+..|++||+.++. .. ..+.. .....++|+|+|+.
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~--------------~~~~~~~~~--~~~~~~~wspDg~~ 181 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGE--------------WSKVDVIEG--GKYATPKWTPDSKG 181 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCC--------------BCSSCCBSC--CTTCCCEECTTSSE
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCC--------------CcCCcccCc--ccccceEEecCCCE
Confidence 455578899999999998843 334579999999875 11 01111 11257899999999
Q ss_pred EEEecCCCc-------------EEEEeCCCCC
Q psy11100 85 LTSSDETGL-------------IIVWMLYKCN 103 (110)
Q Consensus 85 l~s~~~~~~-------------i~~w~~~~~~ 103 (110)
|+.++.+.. |++|++.++.
T Consensus 182 l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~ 213 (695)
T 2bkl_A 182 FYYEWLPTDPSIKVDERPGYTTIRYHTLGTEP 213 (695)
T ss_dssp EEEEECCCCTTSCGGGGGGGCEEEEEETTSCG
T ss_pred EEEEEecCCCCCccccCCCCCEEEEEECCCCc
Confidence 888877665 9999998775
No 166
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.42 E-value=1.8e-06 Score=55.85 Aligned_cols=71 Identities=14% Similarity=0.136 Sum_probs=55.4
Q ss_pred EEEecCCCEEEEEec-----------CCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEe
Q psy11100 20 LAWHQNQGWIAVGGD-----------DGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSS 88 (110)
Q Consensus 20 ~~~~p~~~~l~~~~~-----------~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 88 (110)
++++|++..+..+.. .+.|.+||..+.. .+..+..+. +..++|+|+|+.++++
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~--------------~v~~i~~~~--p~~ia~spdg~~l~v~ 322 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQ--------------RVARIPGRD--ALSMTIDQQRNLMLTL 322 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTE--------------EEEEEECTT--CCEEEEETTTTEEEEE
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCc--------------EEEEEecCC--eeEEEECCCCCEEEEe
Confidence 678999777655432 3479999998876 566666665 8899999999998877
Q ss_pred cCCCcEEEEeCCCC--CChhh
Q psy11100 89 DETGLIIVWMLYKC--NDDDE 107 (110)
Q Consensus 89 ~~~~~i~~w~~~~~--~~~~~ 107 (110)
+. +.|.+||..++ +.+.+
T Consensus 323 n~-~~v~v~D~~t~~l~~~~~ 342 (361)
T 2oiz_A 323 DG-GNVNVYDISQPEPKLLRT 342 (361)
T ss_dssp CS-SCEEEEECSSSSCEEEEE
T ss_pred CC-CeEEEEECCCCcceeeEE
Confidence 76 99999999998 65543
No 167
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.41 E-value=1.3e-05 Score=50.60 Aligned_cols=79 Identities=11% Similarity=0.063 Sum_probs=60.3
Q ss_pred CCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecCC
Q psy11100 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDET 91 (110)
Q Consensus 12 ~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~ 91 (110)
.+...+..++|+|+|++++++..++.|.+||..... .......+...+..++++++|.++++...+
T Consensus 42 ~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~--------------~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~ 107 (333)
T 2dg1_A 42 KKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKE--------------IKRPFVSHKANPAAIKIHKDGRLFVCYLGD 107 (333)
T ss_dssp SSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCC--------------EEEEEECSSSSEEEEEECTTSCEEEEECTT
T ss_pred ccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCc--------------EEEEeeCCCCCcceEEECCCCcEEEEeCCC
Confidence 344567899999999977788888899999987664 222222455779999999999988777655
Q ss_pred ----CcEEEEeCCCCCC
Q psy11100 92 ----GLIIVWMLYKCND 104 (110)
Q Consensus 92 ----~~i~~w~~~~~~~ 104 (110)
+.|.+||..++..
T Consensus 108 ~~~~~~i~~~d~~~~~~ 124 (333)
T 2dg1_A 108 FKSTGGIFAATENGDNL 124 (333)
T ss_dssp SSSCCEEEEECTTSCSC
T ss_pred CCCCceEEEEeCCCCEE
Confidence 6899999887654
No 168
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.40 E-value=6.5e-07 Score=61.57 Aligned_cols=75 Identities=8% Similarity=-0.061 Sum_probs=56.4
Q ss_pred CCCceEEEEEecCCCEEEEEecC----------CcEEEEEcCC------CCCcCCcccccccceeeeEEee-ccCCCeEE
Q psy11100 13 NNTKVNCLAWHQNQGWIAVGGDD----------GLLKVLKLDT------GKESTGQVAAANVNLAMNQSLQ-GHSGKVRA 75 (110)
Q Consensus 13 h~~~v~~~~~~p~~~~l~~~~~~----------~~v~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~ 75 (110)
|...+..++|+|||+.|++++.+ ..|++|++.. +. ...+. .+...+..
T Consensus 128 ~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~---------------~~~l~~~~~~~~~~ 192 (662)
T 3azo_A 128 GGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSA---------------VRELSDDAHRFVTG 192 (662)
T ss_dssp TCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGG---------------SEESSCSCSSEECC
T ss_pred CCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCc---------------eeEEEecCCCcccC
Confidence 55678899999999999888766 4788999876 32 12333 44466778
Q ss_pred EEEcCCCCeEEEecCC--------CcEEEEeCC-CC
Q psy11100 76 IIWNEQYEKLTSSDET--------GLIIVWMLY-KC 102 (110)
Q Consensus 76 ~~~s~~~~~l~s~~~~--------~~i~~w~~~-~~ 102 (110)
++|||||+.|+.++.+ ..|.+||+. ++
T Consensus 193 ~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g 228 (662)
T 3azo_A 193 PRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDG 228 (662)
T ss_dssp CEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTS
T ss_pred ceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCC
Confidence 9999999998766533 479999998 45
No 169
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.39 E-value=8.7e-07 Score=62.09 Aligned_cols=75 Identities=11% Similarity=0.107 Sum_probs=57.0
Q ss_pred CCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCC-----eEEEEEcCCCCeEEEe
Q psy11100 14 NTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGK-----VRAIIWNEQYEKLTSS 88 (110)
Q Consensus 14 ~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----v~~~~~s~~~~~l~s~ 88 (110)
......+.|+|+|++++++ ++.+++||+.++. ....+..|... ...++|||||+.++.+
T Consensus 16 ~~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~ 79 (740)
T 4a5s_A 16 RLKLYSLRWISDHEYLYKQ--ENNILVFNAEYGN--------------SSVFLENSTFDEFGHSINDYSISPDGQFILLE 79 (740)
T ss_dssp CCCCCCEEECSSSEEEEEE--TTEEEEEETTTCC--------------EEEEECTTTTTTCCSCCCEEEECTTSSEEEEE
T ss_pred cccccccEECCCCcEEEEc--CCcEEEEECCCCc--------------eEEEEechhhhhhcccccceEECCCCCEEEEE
Confidence 4456689999999988886 8999999999876 33445555422 2458999999998887
Q ss_pred cCC---------CcEEEEeCCCCCC
Q psy11100 89 DET---------GLIIVWMLYKCND 104 (110)
Q Consensus 89 ~~~---------~~i~~w~~~~~~~ 104 (110)
..+ +.+.+||+.+++.
T Consensus 80 ~~~~~~~r~~~~~~~~~~d~~~~~~ 104 (740)
T 4a5s_A 80 YNYVKQWRHSYTASYDIYDLNKRQL 104 (740)
T ss_dssp EEEEECSSSCEEEEEEEEETTTTEE
T ss_pred ECCeeeEEEccceEEEEEECCCCcE
Confidence 764 5677999998764
No 170
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.38 E-value=3e-06 Score=53.75 Aligned_cols=73 Identities=15% Similarity=0.119 Sum_probs=50.8
Q ss_pred ceEEEEEecCCCEEEEEecC---Cc--EEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecC
Q psy11100 16 KVNCLAWHQNQGWIAVGGDD---GL--LKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE 90 (110)
Q Consensus 16 ~v~~~~~~p~~~~l~~~~~~---~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 90 (110)
.+..++|+|||+.|+..+.+ +. +.+|++..+. ... +..... +..++|+|+|+.|+.+..
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~--------------~~~-l~~~~~-~~~~~wspdg~~l~~~~~ 123 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLS--------------SKK-ILEAKN-IRSLEWNEDSRKLLIVGF 123 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTE--------------EEE-EEEESE-EEEEEECTTSSEEEEEEE
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCc--------------eEE-EEcCCC-ccceeECCCCCEEEEEEc
Confidence 46778999999998877653 33 6777776654 222 222223 889999999998776652
Q ss_pred ---------------------------CCcEEEEeCCCCCC
Q psy11100 91 ---------------------------TGLIIVWMLYKCND 104 (110)
Q Consensus 91 ---------------------------~~~i~~w~~~~~~~ 104 (110)
...|.+||+.++..
T Consensus 124 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~ 164 (347)
T 2gop_A 124 KRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEV 164 (347)
T ss_dssp CCCC---------CCCC---------CEEEEEEEETTTTEE
T ss_pred cCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeE
Confidence 25688999987754
No 171
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.36 E-value=2.1e-05 Score=50.62 Aligned_cols=76 Identities=11% Similarity=0.105 Sum_probs=54.4
Q ss_pred CCCceEEEEEecCCCEEEEEec-CCcEEEEEcC-CCCCcCCcccccccceeeeEEee--ccCCCeEEEEEcCCCCeEEEe
Q psy11100 13 NNTKVNCLAWHQNQGWIAVGGD-DGLLKVLKLD-TGKESTGQVAAANVNLAMNQSLQ--GHSGKVRAIIWNEQYEKLTSS 88 (110)
Q Consensus 13 h~~~v~~~~~~p~~~~l~~~~~-~~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~s~ 88 (110)
+...+..++|+|+|+.+++++. ++.|.+|++. .+. +.....+. .+...+..++|+|+|+.++.+
T Consensus 143 ~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~------------~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~ 210 (365)
T 1jof_A 143 ENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGE------------VELVGSVDAPDPGDHPRWVAMHPTGNYLYAL 210 (365)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSC------------EEEEEEEECSSTTCCEEEEEECTTSSEEEEE
T ss_pred CCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCC------------EEEeeeEecCCCCCCCCEeEECCCCCEEEEE
Confidence 4467889999999998877654 5789999997 443 00112232 235668899999999987665
Q ss_pred c-CCCcEEEEeCC
Q psy11100 89 D-ETGLIIVWMLY 100 (110)
Q Consensus 89 ~-~~~~i~~w~~~ 100 (110)
+ .++.+.+|++.
T Consensus 211 ~~~~~~v~v~~~~ 223 (365)
T 1jof_A 211 MEAGNRICEYVID 223 (365)
T ss_dssp ETTTTEEEEEEEC
T ss_pred ECCCCeEEEEEEe
Confidence 5 57889998764
No 172
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.27 E-value=2.6e-05 Score=48.66 Aligned_cols=76 Identities=9% Similarity=-0.191 Sum_probs=60.6
Q ss_pred CCCceEEEEEecCCC-EEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecCC
Q psy11100 13 NNTKVNCLAWHQNQG-WIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDET 91 (110)
Q Consensus 13 h~~~v~~~~~~p~~~-~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~ 91 (110)
+......++|+|+|+ +++++..++.|..|+..... ..+..+...+..++++++|.++++...+
T Consensus 26 ~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~~----------------~~~~~~~~~~~~l~~~~dg~l~v~~~~~ 89 (296)
T 3e5z_A 26 GFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQL----------------SPEMHPSHHQNGHCLNKQGHLIACSHGL 89 (296)
T ss_dssp CCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSCE----------------EEEESSCSSEEEEEECTTCCEEEEETTT
T ss_pred CCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCCe----------------EEEECCCCCcceeeECCCCcEEEEecCC
Confidence 445677899999998 77788888999999987542 3344456778999999999988888777
Q ss_pred CcEEEEeCCCCCC
Q psy11100 92 GLIIVWMLYKCND 104 (110)
Q Consensus 92 ~~i~~w~~~~~~~ 104 (110)
+.|.+||..+++.
T Consensus 90 ~~i~~~d~~~g~~ 102 (296)
T 3e5z_A 90 RRLERQREPGGEW 102 (296)
T ss_dssp TEEEEECSTTCCE
T ss_pred CeEEEEcCCCCcE
Confidence 8999999977764
No 173
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.24 E-value=9e-07 Score=56.87 Aligned_cols=73 Identities=12% Similarity=0.034 Sum_probs=51.8
Q ss_pred eEEEEEecCCCEEEEEecC---CcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCC-eEEEEEcCCCCeEEEecCCC
Q psy11100 17 VNCLAWHQNQGWIAVGGDD---GLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGK-VRAIIWNEQYEKLTSSDETG 92 (110)
Q Consensus 17 v~~~~~~p~~~~l~~~~~~---~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~s~~~~~l~s~~~~~ 92 (110)
+..++|+|+|+.++..... ..+.+|++..+. . ..+..+... ...+.|+|+|+.|+.+..++
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~--------------~-~~l~~~~~~~~~~~~~spdg~~l~~~~~~~ 102 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQ--------------A-VQLTEGKGDNTFGGFISTDERAFFYVKNEL 102 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTE--------------E-EECCCSSCBCTTTCEECTTSSEEEEEETTT
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCc--------------E-EEeecCCCCccccceECCCCCEEEEEEcCC
Confidence 6678899999988776543 367778887654 2 222222222 23378999999998888888
Q ss_pred cEEEEeCCCCCC
Q psy11100 93 LIIVWMLYKCND 104 (110)
Q Consensus 93 ~i~~w~~~~~~~ 104 (110)
.|.+||+.++..
T Consensus 103 ~l~~~d~~~~~~ 114 (396)
T 3c5m_A 103 NLMKVDLETLEE 114 (396)
T ss_dssp EEEEEETTTCCE
T ss_pred cEEEEECCCCCc
Confidence 999999987653
No 174
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.20 E-value=5.8e-06 Score=53.27 Aligned_cols=75 Identities=8% Similarity=0.051 Sum_probs=52.1
Q ss_pred ceEEEE-EecCCCEEEEEecCC------cEEEEEcCC-CCCcCCcccccccceeeeE-EeeccCCCeEEEEEcC---CCC
Q psy11100 16 KVNCLA-WHQNQGWIAVGGDDG------LLKVLKLDT-GKESTGQVAAANVNLAMNQ-SLQGHSGKVRAIIWNE---QYE 83 (110)
Q Consensus 16 ~v~~~~-~~p~~~~l~~~~~~~------~v~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~s~---~~~ 83 (110)
.+..++ |+|||++|++++.+. .+.+|++.. +. +.... ....+...+..++|+| +|+
T Consensus 255 ~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~------------~~~~~~~~~~~~~~~~~~a~sp~~~dg~ 322 (365)
T 1jof_A 255 YRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGS------------IEKQLFLSPTPTSGGHSNAVSPCPWSDE 322 (365)
T ss_dssp EEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSC------------EEEEEEEEECSSCCTTCCCEEECTTCTT
T ss_pred ccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCC------------EEEeeeeeecCCCCcccceecCCCcCCC
Confidence 578899 999999887665432 799999863 32 00111 1223344456789999 899
Q ss_pred eEEEecC-CCcEEEEeCCCC
Q psy11100 84 KLTSSDE-TGLIIVWMLYKC 102 (110)
Q Consensus 84 ~l~s~~~-~~~i~~w~~~~~ 102 (110)
+++.++. ++.|.+|++...
T Consensus 323 ~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 323 WMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp EEEEECSSSCEEEEEEEETT
T ss_pred EEEEEEcCCCeEEEEEEchh
Confidence 9888875 489999988654
No 175
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.16 E-value=6.8e-05 Score=46.37 Aligned_cols=73 Identities=5% Similarity=0.069 Sum_probs=54.2
Q ss_pred CCceEEEEEecCCCEEEEEecCC-cEEEEEcCCCCCcCCcccccccceeeeEEeecc--CCCeEEEEEcCCCCeEEEecC
Q psy11100 14 NTKVNCLAWHQNQGWIAVGGDDG-LLKVLKLDTGKESTGQVAAANVNLAMNQSLQGH--SGKVRAIIWNEQYEKLTSSDE 90 (110)
Q Consensus 14 ~~~v~~~~~~p~~~~l~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~s~~~ 90 (110)
...+..++++|+|+++++...++ .|.+|+.... .+..+..+ ...+..++++|+|+++++ +.
T Consensus 206 ~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~---------------~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~ 269 (286)
T 1q7f_A 206 TNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQ---------------LISALESKVKHAQCFDVALMDDGSVVLA-SK 269 (286)
T ss_dssp SCSEEEEEECTTCCEEEEECSSSCEEEEECTTSC---------------EEEEEEESSCCSCEEEEEEETTTEEEEE-ET
T ss_pred cCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCC---------------EEEEEcccCCCCcceeEEECCCCcEEEE-CC
Confidence 35688899999999888877775 9999986432 23333333 234778999999988777 46
Q ss_pred CCcEEEEeCCCC
Q psy11100 91 TGLIIVWMLYKC 102 (110)
Q Consensus 91 ~~~i~~w~~~~~ 102 (110)
++.|.+|++...
T Consensus 270 ~~~v~v~~~~~~ 281 (286)
T 1q7f_A 270 DYRLYIYRYVQL 281 (286)
T ss_dssp TTEEEEEECSCC
T ss_pred CCeEEEEEcccc
Confidence 899999998654
No 176
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.13 E-value=1.6e-05 Score=52.28 Aligned_cols=70 Identities=13% Similarity=-0.020 Sum_probs=52.2
Q ss_pred CCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecCC
Q psy11100 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDET 91 (110)
Q Consensus 12 ~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~ 91 (110)
.|...+.++.+.+. .++.+..||.+.+|++.... .. .+...|.+++|||+| ++.+..|
T Consensus 124 ~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~--------------~~----~~~~~Vs~v~WSpkG--~~vg~~d 181 (388)
T 1xip_A 124 SFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKS--------------TK----QLAQNVTSFDVTNSQ--LAVLLKD 181 (388)
T ss_dssp ECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCC--------------EE----EEEESEEEEEECSSE--EEEEETT
T ss_pred eeecceeeEEecCC--CEEEEECCCCEEEEEccCCc--------------cc----cccCCceEEEEcCCc--eEEEEcC
Confidence 34556777666543 27777889999999998765 21 134679999999999 5677789
Q ss_pred CcEEEEeCCCCC
Q psy11100 92 GLIIVWMLYKCN 103 (110)
Q Consensus 92 ~~i~~w~~~~~~ 103 (110)
|.+++|++..+.
T Consensus 182 g~i~~~~~~~~~ 193 (388)
T 1xip_A 182 RSFQSFAWRNGE 193 (388)
T ss_dssp SCEEEEEEETTE
T ss_pred CcEEEEcCCCcc
Confidence 999999887665
No 177
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.11 E-value=0.0001 Score=46.85 Aligned_cols=75 Identities=8% Similarity=-0.028 Sum_probs=58.1
Q ss_pred CCceEEEEEecCCCEEEEEecC------------------------CcEEEEEcCCCCCcCCcccccccceeeeEEee-c
Q psy11100 14 NTKVNCLAWHQNQGWIAVGGDD------------------------GLLKVLKLDTGKESTGQVAAANVNLAMNQSLQ-G 68 (110)
Q Consensus 14 ~~~v~~~~~~p~~~~l~~~~~~------------------------~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 68 (110)
.+.+..++++|+|+++++...+ +.+.+||...+. ...... .
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~--------------~~~~~~~~ 88 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAE--------------ILQSSGKN 88 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCC--------------EEEEECTT
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCe--------------EEeccCCC
Confidence 4679999999999988887766 368888887665 333333 3
Q ss_pred cCCCeEEEEEcCCCCeEEEecCCCcEEEEeCCCC
Q psy11100 69 HSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYKC 102 (110)
Q Consensus 69 ~~~~v~~~~~s~~~~~l~s~~~~~~i~~w~~~~~ 102 (110)
+-.....++++|+|.++++...++.|..|+....
T Consensus 89 ~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~ 122 (329)
T 3fvz_A 89 LFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSK 122 (329)
T ss_dssp TCSSEEEEEECTTSCEEEEETTTTEEEEECTTCS
T ss_pred ccCCceEEEECCCCCEEEEECCCCEEEEEeCCCC
Confidence 3457889999999999888888899999997543
No 178
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.06 E-value=5.1e-05 Score=48.69 Aligned_cols=79 Identities=14% Similarity=-0.087 Sum_probs=54.5
Q ss_pred CCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEE--EcCCCCeEEEe-
Q psy11100 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAII--WNEQYEKLTSS- 88 (110)
Q Consensus 12 ~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~s~~~~~l~s~- 88 (110)
++...+....|+|||+.|+.++.++.+++||+..+. .......+...+.... ++|++..++..
T Consensus 78 ~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~--------------~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~ 143 (388)
T 3pe7_A 78 GRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLE--------------ENVVYQVPAEWVGYGTWVANSDCTKLVGIE 143 (388)
T ss_dssp SSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCC--------------EEEEEECCTTEEEEEEEEECTTSSEEEEEE
T ss_pred CCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCc--------------ceeeeechhhcccccceeECCCCCeecccc
Confidence 343344457899999999999988899999999875 2233344444443333 48999887642
Q ss_pred ---------------------cCCCcEEEEeCCCCCC
Q psy11100 89 ---------------------DETGLIIVWMLYKCND 104 (110)
Q Consensus 89 ---------------------~~~~~i~~w~~~~~~~ 104 (110)
..+..|.+||+.++..
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~ 180 (388)
T 3pe7_A 144 IRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGES 180 (388)
T ss_dssp EEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCE
T ss_pred ccCcccccccccchhhhhhccCCcceEEEEECCCCce
Confidence 2346799999988753
No 179
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.02 E-value=1.2e-05 Score=52.05 Aligned_cols=75 Identities=7% Similarity=-0.070 Sum_probs=54.9
Q ss_pred EEEEecCCCEEEEEec----------CCcEEEEEcCCCCCcCCcccccccceeeeEEeec------cCCCeEEEEEcCCC
Q psy11100 19 CLAWHQNQGWIAVGGD----------DGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQG------HSGKVRAIIWNEQY 82 (110)
Q Consensus 19 ~~~~~p~~~~l~~~~~----------~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~v~~~~~s~~~ 82 (110)
.++++|||+.+..++. ++.|.+||..... ....+.. +......++++|+|
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~--------------~~~~i~~~~~~~~~g~~p~~i~~spdg 119 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLT--------------FEKEISLPPKRVQGLNYDGLFRQTTDG 119 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCC--------------EEEEEEECTTBCCBCCCGGGEEECTTS
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCc--------------EEEEEEcCccccccCCCcceEEECCCC
Confidence 7899999998887762 5679999988765 3333321 12345678999999
Q ss_pred CeEEEecC--CCcEEEEeCCCCCChhh
Q psy11100 83 EKLTSSDE--TGLIIVWMLYKCNDDDE 107 (110)
Q Consensus 83 ~~l~s~~~--~~~i~~w~~~~~~~~~~ 107 (110)
++++.+.. ++.|.+||+.+++.+.+
T Consensus 120 ~~l~v~n~~~~~~v~v~d~~~~~~~~~ 146 (361)
T 2oiz_A 120 KFIVLQNASPATSIGIVDVAKGDYVED 146 (361)
T ss_dssp SEEEEEEESSSEEEEEEETTTTEEEEE
T ss_pred CEEEEECCCCCCeEEEEECCCCcEEEE
Confidence 99777653 67899999998866543
No 180
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.02 E-value=8.5e-05 Score=48.93 Aligned_cols=73 Identities=11% Similarity=0.017 Sum_probs=55.1
Q ss_pred CCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecCC
Q psy11100 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDET 91 (110)
Q Consensus 12 ~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~ 91 (110)
++.+ |..++| ++..|+.+ .++.|++||+.... .......+...+..+.+.+. .++.+..|
T Consensus 86 ~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~--------------~~~~~~~~~~~v~~i~~~~p--~~av~~~d 145 (388)
T 1xip_A 86 EIPD-VIFVCF--HGDQVLVS-TRNALYSLDLEELS--------------EFRTVTSFEKPVFQLKNVNN--TLVILNSV 145 (388)
T ss_dssp ECTT-EEEEEE--ETTEEEEE-ESSEEEEEESSSTT--------------CEEEEEECSSCEEEEEECSS--EEEEEETT
T ss_pred eCCC-eeEEEE--CCCEEEEE-cCCcEEEEEchhhh--------------ccCccceeecceeeEEecCC--CEEEEECC
Confidence 4555 999999 88999888 78999999998764 12233445566777766543 38888999
Q ss_pred CcEEEEeCCCCCC
Q psy11100 92 GLIIVWMLYKCND 104 (110)
Q Consensus 92 ~~i~~w~~~~~~~ 104 (110)
|.|.+||+.++..
T Consensus 146 G~L~v~dl~~~~~ 158 (388)
T 1xip_A 146 NDLSALDLRTKST 158 (388)
T ss_dssp SEEEEEETTTCCE
T ss_pred CCEEEEEccCCcc
Confidence 9999999987654
No 181
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.00 E-value=0.00011 Score=45.44 Aligned_cols=73 Identities=11% Similarity=0.079 Sum_probs=55.5
Q ss_pred CCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeecc--CCCeEEEEEcCCCCeEEEecC
Q psy11100 13 NNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGH--SGKVRAIIWNEQYEKLTSSDE 90 (110)
Q Consensus 13 h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~s~~~~~l~s~~~ 90 (110)
+...+..++++|+|+.+++...++.|.+|+.... ....+..+ ...+..++++++|.++++...
T Consensus 162 ~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~---------------~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~ 226 (286)
T 1q7f_A 162 HLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQ---------------YLRQIGGEGITNYPIGVGINSNGEILIADNH 226 (286)
T ss_dssp TCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCC---------------EEEEESCTTTSCSEEEEEECTTCCEEEEECS
T ss_pred ccCCcEEEEECCCCCEEEEECCCCEEEEEcCCCC---------------EEEEEccCCccCCCcEEEECCCCCEEEEeCC
Confidence 4456889999999998777777889999997543 23334332 356889999999998888877
Q ss_pred CC-cEEEEeCC
Q psy11100 91 TG-LIIVWMLY 100 (110)
Q Consensus 91 ~~-~i~~w~~~ 100 (110)
++ .|.+|+..
T Consensus 227 ~~~~i~~~~~~ 237 (286)
T 1q7f_A 227 NNFNLTIFTQD 237 (286)
T ss_dssp SSCEEEEECTT
T ss_pred CCEEEEEECCC
Confidence 75 99999954
No 182
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.00 E-value=0.00012 Score=46.49 Aligned_cols=80 Identities=10% Similarity=0.006 Sum_probs=58.1
Q ss_pred CCCceEEEEEec-CCCEEEEEe-cCCcEEEEEcCCCCCcCCcccccccceeeeEEeec----------cCCCeEEEEEcC
Q psy11100 13 NNTKVNCLAWHQ-NQGWIAVGG-DDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQG----------HSGKVRAIIWNE 80 (110)
Q Consensus 13 h~~~v~~~~~~p-~~~~l~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~v~~~~~s~ 80 (110)
+......++++| ++..+++.+ .++.|++|+.. +. ....+.. +-.....++++|
T Consensus 141 ~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~-g~--------------~~~~~~~~g~~~~~~~~~~~~p~gia~d~ 205 (329)
T 3fvz_A 141 HFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPS-GK--------------FVTQWGEESSGSSPRPGQFSVPHSLALVP 205 (329)
T ss_dssp CCSSEEEEEECTTTCCEEEEECSSCCEEEEECTT-SC--------------EEEEECEECCSSSCCTTEESCEEEEEEET
T ss_pred ccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCC-CC--------------EEEEeccCCCCCCCCCcccCCCcEEEEEC
Confidence 344688899999 788888775 68899999844 32 2233321 223478999999
Q ss_pred C-CCeEEEecCCCcEEEEeCCCCCChhh
Q psy11100 81 Q-YEKLTSSDETGLIIVWMLYKCNDDDE 107 (110)
Q Consensus 81 ~-~~~l~s~~~~~~i~~w~~~~~~~~~~ 107 (110)
+ +.++++...++.|++|+..+++.+..
T Consensus 206 ~~g~l~v~d~~~~~I~~~~~~~G~~~~~ 233 (329)
T 3fvz_A 206 HLDQLCVADRENGRIQCFKTDTKEFVRE 233 (329)
T ss_dssp TTTEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred CCCEEEEEECCCCEEEEEECCCCcEEEE
Confidence 8 77788888899999999987766544
No 183
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.96 E-value=2.2e-05 Score=55.13 Aligned_cols=75 Identities=17% Similarity=0.153 Sum_probs=50.0
Q ss_pred CCCceEEEEEecCCCEEEEEecC-C----cEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEE
Q psy11100 13 NNTKVNCLAWHQNQGWIAVGGDD-G----LLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTS 87 (110)
Q Consensus 13 h~~~v~~~~~~p~~~~l~~~~~~-~----~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s 87 (110)
|+..+..++|||||+.|+.+..+ | .|++||+..+. .... ..+...+..++|+|+ +.|+.
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~--------------~~~~-~~~~~~~~~~~wspD-~~l~~ 224 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGK--------------PLAD-ELKWVKFSGLAWLGN-DALLY 224 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCC--------------EEEE-EEEEEESCCCEESTT-SEEEE
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCC--------------CCCc-cCCCceeccEEEECC-CEEEE
Confidence 43467889999999998876543 3 59999999876 2111 111112346899999 88776
Q ss_pred ecCCCc--------------EEEEeCCCCC
Q psy11100 88 SDETGL--------------IIVWMLYKCN 103 (110)
Q Consensus 88 ~~~~~~--------------i~~w~~~~~~ 103 (110)
+..+.. |++|++.++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~ 254 (741)
T 1yr2_A 225 SRFAEPKEGQAFQALNYNQTVWLHRLGTPQ 254 (741)
T ss_dssp EECCCC--------CCCCCEEEEEETTSCG
T ss_pred EEecCcccccccccCCCCCEEEEEECCCCc
Confidence 665443 8889987665
No 184
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.86 E-value=0.00012 Score=46.96 Aligned_cols=72 Identities=6% Similarity=-0.042 Sum_probs=48.3
Q ss_pred ceEEEEEecCCCEEEEEecC-----CcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcC-CCCeEEEec
Q psy11100 16 KVNCLAWHQNQGWIAVGGDD-----GLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNE-QYEKLTSSD 89 (110)
Q Consensus 16 ~v~~~~~~p~~~~l~~~~~~-----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~ 89 (110)
.+..++|+|+|+.|+..+.+ +.+.+||+..+. . ..+.... ... +.|+| +|..++.+.
T Consensus 239 ~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~--------------~-~~l~~~~-~~~-~~~s~~dg~~l~~~~ 301 (396)
T 3c5m_A 239 SCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLE--------------N-EEVMVMP-PCS-HLMSNFDGSLMVGDG 301 (396)
T ss_dssp EEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCC--------------E-EEEEECC-SEE-EEEECSSSSEEEEEE
T ss_pred cccceEECCCCCEEEEEecCCCCccceEEEEECCCCC--------------e-EEeeeCC-CCC-CCccCCCCceEEEec
Confidence 47778999999977666443 349999987664 1 1111111 123 88999 999877643
Q ss_pred ----------------CCCcEEEEeCCCCCC
Q psy11100 90 ----------------ETGLIIVWMLYKCND 104 (110)
Q Consensus 90 ----------------~~~~i~~w~~~~~~~ 104 (110)
.+..|.+||+.++..
T Consensus 302 ~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~ 332 (396)
T 3c5m_A 302 CDAPVDVADADSYNIENDPFLYVLNTKAKSA 332 (396)
T ss_dssp CCC----------CCCCCCEEEEEETTTTBC
T ss_pred CCcceeeccccccccCCCCcEEEEecccCce
Confidence 346799999887653
No 185
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.84 E-value=0.00014 Score=50.84 Aligned_cols=75 Identities=11% Similarity=0.075 Sum_probs=52.2
Q ss_pred eEEEEEecCCCEEEEEecCCc----------------EEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcC
Q psy11100 17 VNCLAWHQNQGWIAVGGDDGL----------------LKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNE 80 (110)
Q Consensus 17 v~~~~~~p~~~~l~~~~~~~~----------------v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 80 (110)
+..++|+|||+.|+.++.++. |++|++.+... .. ..+.....+...+..+.|||
T Consensus 173 ~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~---~~-------~~v~~~~~~~~~~~~~~~Sp 242 (710)
T 2xdw_A 173 FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQS---ED-------ILCAEFPDEPKWMGGAELSD 242 (710)
T ss_dssp SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGG---GC-------EEEECCTTCTTCEEEEEECT
T ss_pred cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcc---cc-------eEEeccCCCCeEEEEEEEcC
Confidence 456899999999988887765 89999876530 00 01112222445578899999
Q ss_pred CCCeEEEecC-----CCcEEEEeCCC
Q psy11100 81 QYEKLTSSDE-----TGLIIVWMLYK 101 (110)
Q Consensus 81 ~~~~l~s~~~-----~~~i~~w~~~~ 101 (110)
+|+.++.... +..|.+||+.+
T Consensus 243 Dg~~l~~~~~~~~~~~~~l~~~d~~~ 268 (710)
T 2xdw_A 243 DGRYVLLSIREGCDPVNRLWYCDLQQ 268 (710)
T ss_dssp TSCEEEEEEECSSSSCCEEEEEEGGG
T ss_pred CCCEEEEEEEccCCCccEEEEEECcc
Confidence 9998765543 56899999876
No 186
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.84 E-value=9.9e-05 Score=51.46 Aligned_cols=76 Identities=8% Similarity=-0.111 Sum_probs=52.2
Q ss_pred EEEEEecCCCEEEEEecCCc-------------EEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCe
Q psy11100 18 NCLAWHQNQGWIAVGGDDGL-------------LKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEK 84 (110)
Q Consensus 18 ~~~~~~p~~~~l~~~~~~~~-------------v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 84 (110)
..++|+|||+.++.++.+.. |++|++.+... . -..+.....+...+..+.|||+|+.
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~---~-------~~lv~~~~~~~~~~~~~~~SpDG~~ 240 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPS---K-------DTVVHERTGDPTTFLQSDLSRDGKY 240 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGG---G-------CEEEECCCCCTTCEEEEEECTTSCC
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCch---h-------ceEEEecCCCCEEEEEEEECCCCCE
Confidence 57899999999998887765 99999886540 0 0012222334457889999999998
Q ss_pred EEEecCCC----cEEEEeCCCCC
Q psy11100 85 LTSSDETG----LIIVWMLYKCN 103 (110)
Q Consensus 85 l~s~~~~~----~i~~w~~~~~~ 103 (110)
++....++ .|.+|+..++.
T Consensus 241 l~~~~~~~~~~~~l~~~~~~~~~ 263 (695)
T 2bkl_A 241 LFVYILRGWSENDVYWKRPGEKD 263 (695)
T ss_dssp EEEEEEETTTEEEEEEECTTCSS
T ss_pred EEEEEeCCCCceEEEEEcCCCCc
Confidence 77665444 67777665443
No 187
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=97.81 E-value=0.00077 Score=41.94 Aligned_cols=73 Identities=8% Similarity=0.158 Sum_probs=55.3
Q ss_pred CceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCC-eEEEecCCCc
Q psy11100 15 TKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYE-KLTSSDETGL 93 (110)
Q Consensus 15 ~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~~~~~ 93 (110)
..+..++++++|.+.++...++.|.+|+..++. ....+..+...+.++++++++. ++++...++.
T Consensus 226 ~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~--------------~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~ 291 (314)
T 1pjx_A 226 GGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQ--------------PKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNA 291 (314)
T ss_dssp CEEEEEEEBTTCCEEEEEETTTEEEEECTTCBS--------------CSEEEECSSSCEEEEEECTTSSEEEEEETTTTE
T ss_pred CCCCceEECCCCCEEEEEcCCCEEEEEcCCCCc--------------EeEEEeCCCCCceeEEECCCCCEEEEEeCCCCe
Confidence 557788999999887777677889999887443 2234444557789999999999 5666667789
Q ss_pred EEEEeCCC
Q psy11100 94 IIVWMLYK 101 (110)
Q Consensus 94 i~~w~~~~ 101 (110)
|..+++..
T Consensus 292 l~~~~~~~ 299 (314)
T 1pjx_A 292 VWKFEWQR 299 (314)
T ss_dssp EEEEECSS
T ss_pred EEEEeCCC
Confidence 99999864
No 188
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=97.78 E-value=0.00027 Score=43.98 Aligned_cols=79 Identities=14% Similarity=0.087 Sum_probs=54.1
Q ss_pred CCCCceEEEEEecCCCEEEEEecCCcEEEEEcCC-CCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecC
Q psy11100 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDT-GKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE 90 (110)
Q Consensus 12 ~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 90 (110)
.+......++|+|+++.+++...++.+.+|++.. +. . . .....+..+...+..++++++|.++++.
T Consensus 169 ~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~----~-~------~~~~~~~~~~~~p~~i~~d~~G~l~v~~-- 235 (296)
T 3e5z_A 169 RDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGE----T-E------YQGVHFTVEPGKTDGLRVDAGGLIWASA-- 235 (296)
T ss_dssp CCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSC----E-E------EEEEEECCSSSCCCSEEEBTTSCEEEEE--
T ss_pred cCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCc----C-c------CCCeEeeCCCCCCCeEEECCCCCEEEEc--
Confidence 3445678899999999887767778999999872 22 0 0 0012222234556679999999987666
Q ss_pred CCcEEEEeCCCCCC
Q psy11100 91 TGLIIVWMLYKCND 104 (110)
Q Consensus 91 ~~~i~~w~~~~~~~ 104 (110)
++.|.+|+.. ++.
T Consensus 236 ~~~v~~~~~~-g~~ 248 (296)
T 3e5z_A 236 GDGVHVLTPD-GDE 248 (296)
T ss_dssp TTEEEEECTT-SCE
T ss_pred CCeEEEECCC-CCE
Confidence 7889999986 443
No 189
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.77 E-value=0.00051 Score=41.88 Aligned_cols=76 Identities=5% Similarity=-0.093 Sum_probs=57.1
Q ss_pred CceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecCCCcE
Q psy11100 15 TKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLI 94 (110)
Q Consensus 15 ~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~~~i 94 (110)
..+..++++++|...++...++.|.+|+..... .......+-..+..++++++|.++++...++.|
T Consensus 192 ~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~--------------~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v 257 (270)
T 1rwi_B 192 TAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTT--------------STVLPFTGLNTPLAVAVDSDRTVYVADRGNDRV 257 (270)
T ss_dssp CSEEEEEECTTCCEEEEETTTSCEEEECTTCSC--------------CEECCCCSCSCEEEEEECTTCCEEEEEGGGTEE
T ss_pred CCceEEEECCCCCEEEEECCCCcEEEEcCCCCc--------------ceeeccCCCCCceeEEECCCCCEEEEECCCCEE
Confidence 567889999999877777778889999886543 111111223568899999999988888889999
Q ss_pred EEEeCCCCCC
Q psy11100 95 IVWMLYKCND 104 (110)
Q Consensus 95 ~~w~~~~~~~ 104 (110)
.++++...+.
T Consensus 258 ~~~~~~~~~~ 267 (270)
T 1rwi_B 258 VKLTSLEHHH 267 (270)
T ss_dssp EEECCCGGGS
T ss_pred EEEcCCCccc
Confidence 9999876554
No 190
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=97.73 E-value=0.00053 Score=47.23 Aligned_cols=75 Identities=11% Similarity=0.024 Sum_probs=56.0
Q ss_pred ceEEEEEecCCCEEEEEecCCcEEEEEcC--CCCCcCCcccccccceeeeEEeeccCCCeEEEEEc----CCCCeEEEec
Q psy11100 16 KVNCLAWHQNQGWIAVGGDDGLLKVLKLD--TGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWN----EQYEKLTSSD 89 (110)
Q Consensus 16 ~v~~~~~~p~~~~l~~~~~~~~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s----~~~~~l~s~~ 89 (110)
.+..+.++|||+++.+++.++.|.++|+. +.. ....+.. ......++|+ |+|++++.++
T Consensus 198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~--------------~v~~i~~-G~~P~~ia~s~~~~pDGk~l~v~n 262 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPT--------------TVAEIKI-GSEARSIETSKMEGWEDKYAIAGA 262 (567)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCC--------------EEEEEEC-CSEEEEEEECCSTTCTTTEEEEEE
T ss_pred CccceEECCCCCEEEEEcCCCeEEEEECCCCCCc--------------EeEEEec-CCCCceeEEccccCCCCCEEEEEE
Confidence 45689999999999889999999999995 443 3334433 2345789999 6999866555
Q ss_pred -CCCcEEEEeCCCCCCh
Q psy11100 90 -ETGLIIVWMLYKCNDD 105 (110)
Q Consensus 90 -~~~~i~~w~~~~~~~~ 105 (110)
.++.+.++|..+.+.+
T Consensus 263 ~~~~~v~ViD~~t~~~~ 279 (567)
T 1qks_A 263 YWPPQYVIMDGETLEPK 279 (567)
T ss_dssp EETTEEEEEETTTCCEE
T ss_pred ccCCeEEEEECCCCcEE
Confidence 5689999998776544
No 191
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.69 E-value=0.00047 Score=44.94 Aligned_cols=74 Identities=8% Similarity=-0.128 Sum_probs=52.5
Q ss_pred EEEEecCCCEEEEEe----------cCCcEEEEEcCCCCCcCCcccccccceeeeEEeecc-------CCCeEEEEEcCC
Q psy11100 19 CLAWHQNQGWIAVGG----------DDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGH-------SGKVRAIIWNEQ 81 (110)
Q Consensus 19 ~~~~~p~~~~l~~~~----------~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~v~~~~~s~~ 81 (110)
.++++|||+.+..+. .++.+.++|..... ....+.-. ......++|+|+
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~--------------~~~~i~~~~~~~~~~g~~p~~~~~spD 135 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFL--------------PIADIELPDAPRFDVGPYSWMNANTPN 135 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCc--------------EEEEEECCCccccccCCCccceEECCC
Confidence 789999999887775 35679999998654 22222111 123457899999
Q ss_pred CCeEEEecC--CCcEEEEeCCCCCChhh
Q psy11100 82 YEKLTSSDE--TGLIIVWMLYKCNDDDE 107 (110)
Q Consensus 82 ~~~l~s~~~--~~~i~~w~~~~~~~~~~ 107 (110)
|++++.++. ++.|.++| .+++...+
T Consensus 136 G~~l~v~n~~~~~~v~viD-~t~~~~~~ 162 (373)
T 2mad_H 136 NADLLFFQFAAGPAVGLVV-QGGSSDDQ 162 (373)
T ss_pred CCEEEEEecCCCCeEEEEE-CCCCEEeE
Confidence 999777653 57899999 88876544
No 192
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.67 E-value=9.9e-05 Score=51.57 Aligned_cols=77 Identities=13% Similarity=0.151 Sum_probs=52.3
Q ss_pred cCCCCCceEEEEEecCCCEEEEEec-C----CcEEEEEcCCCCCcCCcccccccceeeeE-EeeccCCCeEEEEEcCCCC
Q psy11100 10 AIPNNTKVNCLAWHQNQGWIAVGGD-D----GLLKVLKLDTGKESTGQVAAANVNLAMNQ-SLQGHSGKVRAIIWNEQYE 83 (110)
Q Consensus 10 ~~~h~~~v~~~~~~p~~~~l~~~~~-~----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~s~~~~ 83 (110)
..+|...+..++|||||++++.+.. . ..|+++|+.++. ... .+.. .....++|+ |++
T Consensus 124 a~~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~--------------~~~~~~~~--~k~~~~~Ws-Dg~ 186 (693)
T 3iuj_A 124 SPDGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQ--------------PLETPLKD--VKFSGISWL-GNE 186 (693)
T ss_dssp STTSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCS--------------EEEEEEEE--EESCCCEEE-TTT
T ss_pred cCCCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCC--------------CCccccCC--ceeccEEEe-CCC
Confidence 3456667888999999998875432 2 468999999875 111 1111 112467899 999
Q ss_pred eEEEecCCC-------------cEEEEeCCCCC
Q psy11100 84 KLTSSDETG-------------LIIVWMLYKCN 103 (110)
Q Consensus 84 ~l~s~~~~~-------------~i~~w~~~~~~ 103 (110)
.|+.+..+. .|++|++.++.
T Consensus 187 ~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~ 219 (693)
T 3iuj_A 187 GFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQ 219 (693)
T ss_dssp EEEEEESSCCC-------CCCCEEEEEETTSCG
T ss_pred EEEEEEecCcccccccccCCCcEEEEEECCCCc
Confidence 877776553 38899987765
No 193
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.64 E-value=0.00015 Score=45.28 Aligned_cols=66 Identities=11% Similarity=-0.060 Sum_probs=50.4
Q ss_pred CCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccC-CCeEEEEEcCCCCeEEEecCCCcEEEEeCCCCCC
Q psy11100 26 QGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHS-GKVRAIIWNEQYEKLTSSDETGLIIVWMLYKCND 104 (110)
Q Consensus 26 ~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~l~s~~~~~~i~~w~~~~~~~ 104 (110)
++.+++++.++.|.+||..++. .+-.+..+. ..+.++.+.|+|+.+++ .++.|..||. +|+.
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~--------------~~w~~~~~~~~~~~~~~~~pdG~ilvs--~~~~V~~~d~-~G~~ 67 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKE--------------IVWEYPLEKGWECNSVAATKAGEILFS--YSKGAKMITR-DGRE 67 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTE--------------EEEEEECCTTCCCCEEEECTTSCEEEE--CBSEEEEECT-TSCE
T ss_pred CcEEEeeCCCCEEEEEECCCCe--------------EEEEeCCCccCCCcCeEECCCCCEEEe--CCCCEEEECC-CCCE
Confidence 5778899999999999997776 445555544 46788999999998884 4677888888 6766
Q ss_pred hhhh
Q psy11100 105 DDEW 108 (110)
Q Consensus 105 ~~~~ 108 (110)
+.++
T Consensus 68 ~W~~ 71 (276)
T 3no2_A 68 LWNI 71 (276)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5543
No 194
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=97.60 E-value=0.0024 Score=40.19 Aligned_cols=78 Identities=5% Similarity=0.003 Sum_probs=53.0
Q ss_pred CCCCceEEEEEecCCCEEEEEecC----CcEEEEEcCCCCCcCCcccccccceeeeEEee--ccCCCeEEEEEcCCCCeE
Q psy11100 12 PNNTKVNCLAWHQNQGWIAVGGDD----GLLKVLKLDTGKESTGQVAAANVNLAMNQSLQ--GHSGKVRAIIWNEQYEKL 85 (110)
Q Consensus 12 ~h~~~v~~~~~~p~~~~l~~~~~~----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l 85 (110)
.+...+.+++++|+|+++++...+ +.|.+||..... ....+. .....+..++++|+|.++
T Consensus 84 ~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~--------------~~~~~~~~~~~~~~~~i~~d~~g~l~ 149 (333)
T 2dg1_A 84 SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDN--------------LQDIIEDLSTAYCIDDMVFDSKGGFY 149 (333)
T ss_dssp CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCS--------------CEEEECSSSSCCCEEEEEECTTSCEE
T ss_pred CCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCE--------------EEEEEccCccCCcccceEECCCCCEE
Confidence 345678999999999987776655 578889887654 111121 234568899999999987
Q ss_pred EEecC------CCcEEEEeCCCCC
Q psy11100 86 TSSDE------TGLIIVWMLYKCN 103 (110)
Q Consensus 86 ~s~~~------~~~i~~w~~~~~~ 103 (110)
++... .+.|..++..+++
T Consensus 150 v~~~~~~~~~~~~~l~~~~~~~~~ 173 (333)
T 2dg1_A 150 FTDFRGYSTNPLGGVYYVSPDFRT 173 (333)
T ss_dssp EEECCCBTTBCCEEEEEECTTSCC
T ss_pred EEeccccccCCCceEEEEeCCCCE
Confidence 76653 3456666665443
No 195
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.55 E-value=0.00078 Score=42.85 Aligned_cols=79 Identities=9% Similarity=0.025 Sum_probs=53.9
Q ss_pred CceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcC-CCCeEEEe----c
Q psy11100 15 TKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNE-QYEKLTSS----D 89 (110)
Q Consensus 15 ~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~----~ 89 (110)
.....++++|++..+..+.. .+.++|...... . ....+.........++++| ++.++++. .
T Consensus 225 ~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~----~--------~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~ 290 (328)
T 3dsm_A 225 DWPSEVQLNGTRDTLYWINN--DIWRMPVEADRV----P--------VRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQ 290 (328)
T ss_dssp CCCEEEEECTTSCEEEEESS--SEEEEETTCSSC----C--------SSCSBCCCSSCEEEEEECTTTCCEEEEECTTSS
T ss_pred CCceeEEEecCCCEEEEEcc--EEEEEECCCCce----e--------eeeeecCCCCceEEEEEcCCCCeEEEEcccccc
Confidence 36788999999988877654 888999876540 0 0000111135678899999 56666666 5
Q ss_pred CCCcEEEEeCCCCCChhhh
Q psy11100 90 ETGLIIVWMLYKCNDDDEW 108 (110)
Q Consensus 90 ~~~~i~~w~~~~~~~~~~~ 108 (110)
.++.|.+||.. ++.+.++
T Consensus 291 ~~~~V~v~d~~-g~~~~~i 308 (328)
T 3dsm_A 291 QQGIVYRYSPQ-GKLIDEF 308 (328)
T ss_dssp SEEEEEEECTT-CCEEEEE
T ss_pred cCCEEEEECCC-CCEEEEE
Confidence 67899999998 7765543
No 196
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.54 E-value=0.0017 Score=39.47 Aligned_cols=74 Identities=8% Similarity=-0.005 Sum_probs=54.3
Q ss_pred CceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecCCCcE
Q psy11100 15 TKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLI 94 (110)
Q Consensus 15 ~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~~~i 94 (110)
..+..++++|+|+..++...++.|.+|+..... ...........+..++++++|.++++...++.|
T Consensus 150 ~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~--------------~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v 215 (270)
T 1rwi_B 150 NDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNN--------------QVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQV 215 (270)
T ss_dssp CSCCCEEECTTCCEEEEEGGGTEEEEECTTTCC--------------EEECCCSSCCSEEEEEECTTCCEEEEETTTSCE
T ss_pred CCceeEEEeCCCCEEEEECCCCEEEEEecCCCc--------------eEeecccCCCCceEEEECCCCCEEEEECCCCcE
Confidence 356788999999877776667889999877654 111111222567899999999888888788899
Q ss_pred EEEeCCCC
Q psy11100 95 IVWMLYKC 102 (110)
Q Consensus 95 ~~w~~~~~ 102 (110)
.+|+....
T Consensus 216 ~~~~~~~~ 223 (270)
T 1rwi_B 216 VKLLAGST 223 (270)
T ss_dssp EEECTTCS
T ss_pred EEEcCCCC
Confidence 99998654
No 197
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.51 E-value=0.00016 Score=47.56 Aligned_cols=75 Identities=9% Similarity=-0.129 Sum_probs=54.1
Q ss_pred EEEecCCCEEEEEe----------cCCcEEEEEcCCCCCcCCcccccccceeeeEEeecc-------CCCeEEEEEcCCC
Q psy11100 20 LAWHQNQGWIAVGG----------DDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGH-------SGKVRAIIWNEQY 82 (110)
Q Consensus 20 ~~~~p~~~~l~~~~----------~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~v~~~~~s~~~ 82 (110)
++++|||+.+..++ .++.|.+||..+.. ....+.-. ......++++|+|
T Consensus 83 va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~--------------v~~~I~v~~g~r~~~g~~P~~~a~spDG 148 (386)
T 3sjl_D 83 PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLL--------------PTADIELPDAPRFLVGTYPWMTSLTPDG 148 (386)
T ss_dssp EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC--------------EEEEEEETTCCCCCBSCCGGGEEECTTS
T ss_pred EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCe--------------EEEEEECCCccccccCCCCceEEEcCCC
Confidence 89999999776654 35679999998876 33333211 1234568999999
Q ss_pred CeEEEecC--CCcEEEEeCCCCCChhhh
Q psy11100 83 EKLTSSDE--TGLIIVWMLYKCNDDDEW 108 (110)
Q Consensus 83 ~~l~s~~~--~~~i~~w~~~~~~~~~~~ 108 (110)
+.+..+.. ++.|.++|..+++.+.++
T Consensus 149 k~lyVan~~~~~~VsVID~~t~~vv~tI 176 (386)
T 3sjl_D 149 KTLLFYQFSPAPAVGVVDLEGKAFKRML 176 (386)
T ss_dssp SEEEEEECSSSCEEEEEETTTTEEEEEE
T ss_pred CEEEEEEcCCCCeEEEEECCCCcEEEEE
Confidence 98666653 688999999998876554
No 198
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.49 E-value=0.00059 Score=42.61 Aligned_cols=74 Identities=7% Similarity=0.016 Sum_probs=56.1
Q ss_pred EEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecCCCcEEEEe
Q psy11100 19 CLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWM 98 (110)
Q Consensus 19 ~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~~~i~~w~ 98 (110)
.++..++|.++++...++.|..||.. ++ .+-.+... .....+...++|..++++..++.|..+|
T Consensus 129 ~v~~~~~G~~lv~~~~~~~v~~~d~~-G~--------------~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d 192 (276)
T 3no2_A 129 QINKNKKGNYLVPLFATSEVREIAPN-GQ--------------LLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLN 192 (276)
T ss_dssp CCEECTTSCEEEEETTTTEEEEECTT-SC--------------EEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEEC
T ss_pred CceECCCCCEEEEecCCCEEEEECCC-CC--------------EEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEe
Confidence 34567889999888888999999987 65 33444332 3455677789999988888888999999
Q ss_pred CCCCCChhhh
Q psy11100 99 LYKCNDDDEW 108 (110)
Q Consensus 99 ~~~~~~~~~~ 108 (110)
..+|+.+.++
T Consensus 193 ~~tG~~~w~~ 202 (276)
T 3no2_A 193 LESNRIVRRV 202 (276)
T ss_dssp TTTCCEEEEE
T ss_pred CcCCcEEEEe
Confidence 9988876654
No 199
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.49 E-value=0.0024 Score=41.66 Aligned_cols=74 Identities=12% Similarity=0.056 Sum_probs=52.7
Q ss_pred EEEEecCCCEEEEEec----------CCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCC-eEEE
Q psy11100 19 CLAWHQNQGWIAVGGD----------DGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYE-KLTS 87 (110)
Q Consensus 19 ~~~~~p~~~~l~~~~~----------~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s 87 (110)
.+.++|++..+..... ++.|.+.|..+.. ....+.. ......++|+|+|+ .++.
T Consensus 271 ~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~--------------vv~~i~~-g~~p~~i~~s~Dg~~~l~v 335 (373)
T 2mad_H 271 QVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQ--------------TSSQISL-GHDVDAISVAQDGGPDLYA 335 (373)
T ss_pred eEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCE--------------EEEEEEC-CCCcCeEEECCCCCeEEEE
Confidence 3677888776655432 3468888887765 4445532 23577999999999 6666
Q ss_pred ec-CCCcEEEEeCCCCCChhh
Q psy11100 88 SD-ETGLIIVWMLYKCNDDDE 107 (110)
Q Consensus 88 ~~-~~~~i~~w~~~~~~~~~~ 107 (110)
+. .++.|.++|..+++.+..
T Consensus 336 ~~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 336 LSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred EcCCCCeEEEEECCCCCEEee
Confidence 66 589999999999887654
No 200
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=97.48 E-value=0.002 Score=40.32 Aligned_cols=86 Identities=12% Similarity=0.059 Sum_probs=56.2
Q ss_pred ceEEEEEecCCCEE-EEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecCCCcE
Q psy11100 16 KVNCLAWHQNQGWI-AVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLI 94 (110)
Q Consensus 16 ~v~~~~~~p~~~~l-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~~~i 94 (110)
....++|+|+++.+ ++...++.|.+|++.... +.. .+......+.........+++.++|.++++....+.|
T Consensus 150 ~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~---G~~----~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v 222 (297)
T 3g4e_A 150 ISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQT---GQI----SNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRV 222 (297)
T ss_dssp BEEEEEECTTSCEEEEEEGGGTEEEEEEECTTT---CCE----EEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEE
T ss_pred cccceEEcCCCCEEEEecCCCCcEEEEeccCCC---Ccc----cCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEE
Confidence 35678999999866 444557789999874211 000 0000122222334567789999999988887778889
Q ss_pred EEEeCCCCCChhhh
Q psy11100 95 IVWMLYKCNDDDEW 108 (110)
Q Consensus 95 ~~w~~~~~~~~~~~ 108 (110)
..||..+++.+.++
T Consensus 223 ~~~d~~tG~~~~~i 236 (297)
T 3g4e_A 223 IRLDPVTGKRLQTV 236 (297)
T ss_dssp EEECTTTCCEEEEE
T ss_pred EEEcCCCceEEEEE
Confidence 99999988765443
No 201
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=97.36 E-value=0.0059 Score=38.23 Aligned_cols=70 Identities=13% Similarity=-0.034 Sum_probs=51.7
Q ss_pred CceEEEEEecCCC-EEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecCCCc
Q psy11100 15 TKVNCLAWHQNQG-WIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGL 93 (110)
Q Consensus 15 ~~v~~~~~~p~~~-~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~~~ 93 (110)
.......|+|+|+ ++.+...++.+..|+.. +. ...+......+..++++++|.++++...++.
T Consensus 45 ~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~---------------~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~ 108 (305)
T 3dr2_A 45 TWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GT---------------VDVLLDATAFTNGNAVDAQQRLVHCEHGRRA 108 (305)
T ss_dssp SSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SC---------------EEEEEESCSCEEEEEECTTSCEEEEETTTTE
T ss_pred cCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CC---------------EEEEeCCCCccceeeECCCCCEEEEECCCCE
Confidence 4566789999988 56666677889999874 32 1334445567889999999998777666678
Q ss_pred EEEEeCC
Q psy11100 94 IIVWMLY 100 (110)
Q Consensus 94 i~~w~~~ 100 (110)
|..|+..
T Consensus 109 v~~~~~~ 115 (305)
T 3dr2_A 109 ITRSDAD 115 (305)
T ss_dssp EEEECTT
T ss_pred EEEECCC
Confidence 8888875
No 202
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=97.32 E-value=0.0015 Score=45.07 Aligned_cols=69 Identities=13% Similarity=0.045 Sum_probs=51.9
Q ss_pred cCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecCCCcEEEEeCC--C
Q psy11100 24 QNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLY--K 101 (110)
Q Consensus 24 p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~~~i~~w~~~--~ 101 (110)
|.+..+++...++.|.++|..+.. .+..+.. ...+..+.++|+|+.+..++.++.|.+||+. +
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~--------------v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t 229 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYE--------------IKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKE 229 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCC--------------EEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSS
T ss_pred CCceEEEEeCCCCeEEEEECCCCe--------------EEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCC
Confidence 444566777778999999999876 4444542 2456789999999998888889999999995 6
Q ss_pred CCChhh
Q psy11100 102 CNDDDE 107 (110)
Q Consensus 102 ~~~~~~ 107 (110)
++.+.+
T Consensus 230 ~~~v~~ 235 (567)
T 1qks_A 230 PTTVAE 235 (567)
T ss_dssp CCEEEE
T ss_pred CcEeEE
Confidence 654433
No 203
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.30 E-value=0.0077 Score=36.91 Aligned_cols=74 Identities=14% Similarity=0.072 Sum_probs=54.6
Q ss_pred CCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecCCC
Q psy11100 13 NNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETG 92 (110)
Q Consensus 13 h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~~ 92 (110)
+...+.+++++++|...++...++.+.+|+.. ... ...........+..+++.++|..+++...++
T Consensus 13 ~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~-------------~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~ 78 (299)
T 2z2n_A 13 QDTGPYGITVSDKGKVWITQHKANMISCINLD-GKI-------------TEYPLPTPDAKVMCLTISSDGEVWFTENAAN 78 (299)
T ss_dssp SSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCE-------------EEEECSSTTCCEEEEEECTTSCEEEEETTTT
T ss_pred cCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCe-------------EEecCCcccCceeeEEECCCCCEEEeCCCCC
Confidence 44678999999999977766667889999887 430 1111122346788999999999888877778
Q ss_pred cEEEEeCC
Q psy11100 93 LIIVWMLY 100 (110)
Q Consensus 93 ~i~~w~~~ 100 (110)
.|..|+..
T Consensus 79 ~i~~~~~~ 86 (299)
T 2z2n_A 79 KIGRITKK 86 (299)
T ss_dssp EEEEECTT
T ss_pred eEEEECCC
Confidence 89888875
No 204
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.27 E-value=0.01 Score=36.35 Aligned_cols=76 Identities=9% Similarity=-0.062 Sum_probs=53.6
Q ss_pred CCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecCCC
Q psy11100 13 NNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETG 92 (110)
Q Consensus 13 h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~~ 92 (110)
+...+..++++++|...++...++.+..|+..... ...........+..+++.+++.++++...++
T Consensus 55 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~--------------~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~ 120 (299)
T 2z2n_A 55 PDAKVMCLTISSDGEVWFTENAANKIGRITKKGII--------------KEYTLPNPDSAPYGITEGPNGDIWFTEMNGN 120 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTTSCE--------------EEEECSSTTCCEEEEEECTTSCEEEEETTTT
T ss_pred ccCceeeEEECCCCCEEEeCCCCCeEEEECCCCcE--------------EEEeCCCcCCCceeeEECCCCCEEEEecCCc
Confidence 34668889999999877776667788888865221 1111222345688999999998888877778
Q ss_pred cEEEEeCCCCC
Q psy11100 93 LIIVWMLYKCN 103 (110)
Q Consensus 93 ~i~~w~~~~~~ 103 (110)
.|..||. ++.
T Consensus 121 ~i~~~d~-~g~ 130 (299)
T 2z2n_A 121 RIGRITD-DGK 130 (299)
T ss_dssp EEEEECT-TCC
T ss_pred eEEEECC-CCC
Confidence 8998887 443
No 205
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.20 E-value=0.0058 Score=38.53 Aligned_cols=70 Identities=6% Similarity=-0.032 Sum_probs=48.1
Q ss_pred CCCCCceEE-EEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEec
Q psy11100 11 IPNNTKVNC-LAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSD 89 (110)
Q Consensus 11 ~~h~~~v~~-~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~ 89 (110)
..+...+.. +.|+ ++ .++++..++.+++| +..+. . ..+..+...|..++|+| ..+++++
T Consensus 259 ~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~--------------~-~~~~~~~~~v~~~~~s~--~~~~~~~ 318 (347)
T 2gop_A 259 DEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGE--------------I-KPIAKGRHWIMGFDVDE--IVVYLKE 318 (347)
T ss_dssp TTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSS--------------E-EEEECSSSEEEEEEESS--SEEEEEE
T ss_pred ccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCc--------------e-EEEecCCCeEEeeeeeC--cEEEEEc
Confidence 355667776 8999 88 88888999999999 77332 2 23333467788999999 5655555
Q ss_pred CCCcE-EEEeCC
Q psy11100 90 ETGLI-IVWMLY 100 (110)
Q Consensus 90 ~~~~i-~~w~~~ 100 (110)
.++.. .+|.+.
T Consensus 319 ~~~~~~~l~~~~ 330 (347)
T 2gop_A 319 TATRLRELFTWD 330 (347)
T ss_dssp CSSSCCEEEEES
T ss_pred CCCChHHheEeC
Confidence 55443 566554
No 206
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.19 E-value=0.0021 Score=42.00 Aligned_cols=74 Identities=12% Similarity=0.035 Sum_probs=52.5
Q ss_pred EEEecCCCEEEEEec---------CCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCe-EEEec
Q psy11100 20 LAWHQNQGWIAVGGD---------DGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEK-LTSSD 89 (110)
Q Consensus 20 ~~~~p~~~~l~~~~~---------~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-l~s~~ 89 (110)
+.++|++..+..+.. ++.+.++|..... .+..+... .....++|+|+|+. +++..
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~--------------vv~~i~vg-~~p~gi~~s~Dg~~l~va~~ 333 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQ--------------TSGPISNG-HDSDAIIAAQDGASDNYANS 333 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCC--------------EEECCEEE-EEECEEEECCSSSCEEEEEE
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCe--------------EEEEEECC-CCcceEEECCCCCEEEEEcc
Confidence 679999887765432 2356699998876 33333322 24678999999985 66666
Q ss_pred -CCCcEEEEeCCCCCChhhh
Q psy11100 90 -ETGLIIVWMLYKCNDDDEW 108 (110)
Q Consensus 90 -~~~~i~~w~~~~~~~~~~~ 108 (110)
.++.|.++|+.+++.+..+
T Consensus 334 ~~~~~VsVID~~t~kvv~~I 353 (368)
T 1mda_H 334 AGTEVLDIYDAASDQDQSSV 353 (368)
T ss_dssp TTTTEEEEEESSSCEEEEEC
T ss_pred CCCCeEEEEECCCCcEEEEE
Confidence 5899999999998876544
No 207
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=97.17 E-value=0.0066 Score=37.66 Aligned_cols=72 Identities=15% Similarity=0.147 Sum_probs=50.3
Q ss_pred CceEEEEEecCCCEEEE-------EecCCcEEEEEcCCCCCcCCcccccccceeeeEEee-----ccCCCeEEEEEcCC-
Q psy11100 15 TKVNCLAWHQNQGWIAV-------GGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQ-----GHSGKVRAIIWNEQ- 81 (110)
Q Consensus 15 ~~v~~~~~~p~~~~l~~-------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~~~~~s~~- 81 (110)
.....++|+++|...++ ...++.|.+|+...+. . ..+. ++...+..++++++
T Consensus 18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~--------------~-~~~~~~~~~~~~~~~~~i~~~~~~ 82 (314)
T 1pjx_A 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGK--------------K-TVICKPEVNGYGGIPAGCQCDRDA 82 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCC--------------E-EEEECCEETTEECCEEEEEECSSS
T ss_pred CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCc--------------E-EEEEecccCCCCCCCceEEEecCC
Confidence 45678999999987776 4667889999876654 1 1111 13466889999999
Q ss_pred CCeEEEecCCCcEEEEeCCCCC
Q psy11100 82 YEKLTSSDETGLIIVWMLYKCN 103 (110)
Q Consensus 82 ~~~l~s~~~~~~i~~w~~~~~~ 103 (110)
+.++++.. ...|..||.. ++
T Consensus 83 g~l~v~~~-~~~l~~~d~~-g~ 102 (314)
T 1pjx_A 83 NQLFVADM-RLGLLVVQTD-GT 102 (314)
T ss_dssp SEEEEEET-TTEEEEEETT-SC
T ss_pred CcEEEEEC-CCCEEEEeCC-CC
Confidence 77665554 3378888877 54
No 208
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.14 E-value=0.0037 Score=43.98 Aligned_cols=74 Identities=9% Similarity=-0.036 Sum_probs=48.1
Q ss_pred EEEEEecCCCEEEEEecCCc--------------EEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCC
Q psy11100 18 NCLAWHQNQGWIAVGGDDGL--------------LKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYE 83 (110)
Q Consensus 18 ~~~~~~p~~~~l~~~~~~~~--------------v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 83 (110)
..++|+|| +.++.+..+.. |++|++.+... .. ..+.....+...+..+.|||+|+
T Consensus 212 ~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~---~~-------~lv~~~~~~~~~~~~~~~SpDG~ 280 (741)
T 1yr2_A 212 SGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQS---AD-------QPVFATPELPKRGHGASVSSDGR 280 (741)
T ss_dssp CCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGG---GC-------EEEECCTTCTTCEEEEEECTTSC
T ss_pred ccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCch---hC-------EEEeccCCCCeEEEEEEECCCCC
Confidence 46789999 88888776554 77888765430 00 01111122233578999999999
Q ss_pred eEEEecC-----CCcEEEEeCCCC
Q psy11100 84 KLTSSDE-----TGLIIVWMLYKC 102 (110)
Q Consensus 84 ~l~s~~~-----~~~i~~w~~~~~ 102 (110)
.++.... ...|.+||+.++
T Consensus 281 ~l~~~~~~~~~~~~~l~~~d~~~~ 304 (741)
T 1yr2_A 281 WVVITSSEGTDPVNTVHVARVTNG 304 (741)
T ss_dssp EEEEEEECTTCSCCEEEEEEEETT
T ss_pred EEEEEEEccCCCcceEEEEECCCC
Confidence 8665553 347999998776
No 209
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.11 E-value=0.00085 Score=43.54 Aligned_cols=66 Identities=14% Similarity=0.096 Sum_probs=40.2
Q ss_pred CCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecCCCcEEEEeCCCCCC
Q psy11100 25 NQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYKCND 104 (110)
Q Consensus 25 ~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~~~i~~w~~~~~~~ 104 (110)
++..+++++.|+.+..||..++. ..-.+.. +.+.+..+..++..++.++.++.|+.||..+|+.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~--------------~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~ 71 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGS--------------IKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEG 71 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCC--------------EEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CC
T ss_pred eCCEEEEEcCCCEEEEEECCCCC--------------EEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCce
Confidence 56778889999999999998876 2223332 3333333455677788888899999999988876
Q ss_pred hh
Q psy11100 105 DD 106 (110)
Q Consensus 105 ~~ 106 (110)
+.
T Consensus 72 ~w 73 (369)
T 2hz6_A 72 LT 73 (369)
T ss_dssp SE
T ss_pred ee
Confidence 43
No 210
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=97.03 E-value=0.016 Score=36.12 Aligned_cols=73 Identities=7% Similarity=-0.042 Sum_probs=51.5
Q ss_pred CCceEEEEEecC-CCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecCCC
Q psy11100 14 NTKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETG 92 (110)
Q Consensus 14 ~~~v~~~~~~p~-~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~~ 92 (110)
..-.....|+|+ +.++.+...++.|..||..... . ..+ .....+.+++++++|.++++. +.
T Consensus 12 ~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~--------------~-~~~-~~~~~~~~i~~~~dG~l~v~~--~~ 73 (297)
T 3g4e_A 12 CRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQ--------------V-QRV-TMDAPVSSVALRQSGGYVATI--GT 73 (297)
T ss_dssp CSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCC--------------E-EEE-ECSSCEEEEEEBTTSSEEEEE--TT
T ss_pred CccccCCeEECCCCEEEEEECCCCEEEEEECCCCc--------------E-EEE-eCCCceEEEEECCCCCEEEEE--CC
Confidence 344567899996 4556666667889999988764 1 222 234678899999999976654 56
Q ss_pred cEEEEeCCCCCC
Q psy11100 93 LIIVWMLYKCND 104 (110)
Q Consensus 93 ~i~~w~~~~~~~ 104 (110)
.|..||..+++.
T Consensus 74 ~l~~~d~~~g~~ 85 (297)
T 3g4e_A 74 KFCALNWKEQSA 85 (297)
T ss_dssp EEEEEETTTTEE
T ss_pred eEEEEECCCCcE
Confidence 788899877653
No 211
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.01 E-value=0.0029 Score=42.19 Aligned_cols=74 Identities=16% Similarity=0.145 Sum_probs=53.6
Q ss_pred EEEecCCCEEEEEec----------CCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCC-eEEEe
Q psy11100 20 LAWHQNQGWIAVGGD----------DGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYE-KLTSS 88 (110)
Q Consensus 20 ~~~~p~~~~l~~~~~----------~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~ 88 (110)
++++|++..+..... ++.|.+.|..+.. ....+..- .....++|+|+++ .+++.
T Consensus 324 va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~k--------------vv~~I~vg-~~P~gia~spDg~~~lyv~ 388 (426)
T 3c75_H 324 TAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGE--------------RINKIELG-HEIDSINVSQDAEPLLYAL 388 (426)
T ss_dssp EEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCC--------------EEEEEEEE-EEECEEEECCSSSCEEEEE
T ss_pred eEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCe--------------EEEEEECC-CCcCeEEEccCCCEEEEEE
Confidence 678998876655432 3468899988876 44444321 2467899999999 77666
Q ss_pred c-CCCcEEEEeCCCCCChhhh
Q psy11100 89 D-ETGLIIVWMLYKCNDDDEW 108 (110)
Q Consensus 89 ~-~~~~i~~w~~~~~~~~~~~ 108 (110)
. .++.|.++|..+++.+..+
T Consensus 389 n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 389 SAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp ETTTTEEEEEETTTCCEEEEE
T ss_pred cCCCCeEEEEECCCCCEEEEe
Confidence 6 6899999999998876553
No 212
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.98 E-value=0.0074 Score=38.33 Aligned_cols=74 Identities=8% Similarity=-0.073 Sum_probs=52.6
Q ss_pred eEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecCCCcEEE
Q psy11100 17 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIV 96 (110)
Q Consensus 17 v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~~~i~~ 96 (110)
...+.+. ++...++...++.|.++|..+.. ...++. .......+++++++..+++...++.|.+
T Consensus 46 ~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~--------------~~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~ 109 (328)
T 3dsm_A 46 AQSMVIR-DGIGWIVVNNSHVIFAIDINTFK--------------EVGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFI 109 (328)
T ss_dssp EEEEEEE-TTEEEEEEGGGTEEEEEETTTCC--------------EEEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEE
T ss_pred ceEEEEE-CCEEEEEEcCCCEEEEEECcccE--------------EEEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEE
Confidence 4556653 34555566667899999999876 444453 2456788999999866666657899999
Q ss_pred EeCCCCCChh
Q psy11100 97 WMLYKCNDDD 106 (110)
Q Consensus 97 w~~~~~~~~~ 106 (110)
||+.+++...
T Consensus 110 iD~~t~~~~~ 119 (328)
T 3dsm_A 110 INPKTYEITG 119 (328)
T ss_dssp EETTTTEEEE
T ss_pred EECCCCeEEE
Confidence 9998876543
No 213
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=96.97 E-value=0.00086 Score=44.70 Aligned_cols=76 Identities=9% Similarity=-0.131 Sum_probs=53.8
Q ss_pred EEEEecCCCEEEEEe----------cCCcEEEEEcCCCCCcCCcccccccceeeeEEeecc-------CCCeEEEEEcCC
Q psy11100 19 CLAWHQNQGWIAVGG----------DDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGH-------SGKVRAIIWNEQ 81 (110)
Q Consensus 19 ~~~~~p~~~~l~~~~----------~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~v~~~~~s~~ 81 (110)
.+.++|||+.+..++ .++.|.++|..+.. ....+.-. ......++++|+
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~--------------vv~~I~v~g~~r~~~g~~P~~~~~spD 187 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFL--------------PIADIELPDAPRFLVGTYQWMNALTPD 187 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC--------------EEEEEEETTCCCCCBSCCGGGSEECTT
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCc--------------EEEEEECCCccccccCCCcceEEEcCC
Confidence 689999999876665 35689999998876 33333211 123346899999
Q ss_pred CCeEEEecC--CCcEEEEeCCCCCChhhh
Q psy11100 82 YEKLTSSDE--TGLIIVWMLYKCNDDDEW 108 (110)
Q Consensus 82 ~~~l~s~~~--~~~i~~w~~~~~~~~~~~ 108 (110)
|+++..+.. ++.|.+.|..+++.+.++
T Consensus 188 Gk~lyV~n~~~~~~VsVID~~t~kvv~~I 216 (426)
T 3c75_H 188 NKNLLFYQFSPAPAVGVVDLEGKTFDRML 216 (426)
T ss_dssp SSEEEEEECSSSCEEEEEETTTTEEEEEE
T ss_pred CCEEEEEecCCCCeEEEEECCCCeEEEEE
Confidence 999776653 678999999988765443
No 214
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=96.94 E-value=0.019 Score=36.41 Aligned_cols=71 Identities=10% Similarity=-0.097 Sum_probs=49.7
Q ss_pred ceEEEEEecCC-CEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecCCCcE
Q psy11100 16 KVNCLAWHQNQ-GWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLI 94 (110)
Q Consensus 16 ~v~~~~~~p~~-~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~~~i 94 (110)
-.....|+|++ .++.+...++.|..|+..... ...+. ....+.+++|+++|.++++. . ..|
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~---------------~~~~~-~~~~v~~i~~~~dg~l~v~~-~-~gl 111 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGR---------------KTVHA-LPFMGSALAKISDSKQLIAS-D-DGL 111 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTE---------------EEEEE-CSSCEEEEEEEETTEEEEEE-T-TEE
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCc---------------EEEEE-CCCcceEEEEeCCCeEEEEE-C-CCE
Confidence 35678999974 456666667889999987654 12222 23578899999999887765 2 348
Q ss_pred EEEeCCCCCC
Q psy11100 95 IVWMLYKCND 104 (110)
Q Consensus 95 ~~w~~~~~~~ 104 (110)
.+||..++..
T Consensus 112 ~~~d~~~g~~ 121 (326)
T 2ghs_A 112 FLRDTATGVL 121 (326)
T ss_dssp EEEETTTCCE
T ss_pred EEEECCCCcE
Confidence 8899877653
No 215
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=96.90 E-value=0.014 Score=38.40 Aligned_cols=73 Identities=16% Similarity=0.116 Sum_probs=51.8
Q ss_pred CceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecCCC--
Q psy11100 15 TKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETG-- 92 (110)
Q Consensus 15 ~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~~-- 92 (110)
.....++++|+++++++...++.|++||..... ....... ..... ++|++++..++.++.++
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~--------------~~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~ 194 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNK--------------VTTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTH 194 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTE--------------EEEEEET-CCBCB-CEECTTSSEEEEEBSSTTC
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCE--------------EEEeecc-CCCCc-eeEecCCCcEEEEecCCCc
Confidence 467789999999977777777899999988664 2222222 22333 89999999877777655
Q ss_pred cEEEEeCCCCC
Q psy11100 93 LIIVWMLYKCN 103 (110)
Q Consensus 93 ~i~~w~~~~~~ 103 (110)
.|.+++...+.
T Consensus 195 ~I~~~d~~~~~ 205 (409)
T 3hrp_A 195 TVYVYMKASGW 205 (409)
T ss_dssp EEEEEEGGGTT
T ss_pred eEEEEEcCCCc
Confidence 78888876543
No 216
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=96.80 E-value=0.021 Score=36.19 Aligned_cols=79 Identities=13% Similarity=0.053 Sum_probs=50.1
Q ss_pred ceEEEEEecCCCEEEEE-ecCCcEEEEEcC--CC-CCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecCC
Q psy11100 16 KVNCLAWHQNQGWIAVG-GDDGLLKVLKLD--TG-KESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDET 91 (110)
Q Consensus 16 ~v~~~~~~p~~~~l~~~-~~~~~v~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~ 91 (110)
....++|+|+++.+..+ ..++.|.+|+.. .+ ... .......+.........+++.++|.++++...+
T Consensus 180 ~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~---------~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~ 250 (326)
T 2ghs_A 180 IPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTG---------KAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGE 250 (326)
T ss_dssp SEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSS---------CCEEEEECTTSSSEEEEEEECTTSCEEEEEETT
T ss_pred ccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCccc---------CceEEEECCCCCCCCCeeEECCCCCEEEEEeCC
Confidence 45678999999876544 456789999975 33 100 000111222233456788999999887777667
Q ss_pred CcEEEEeCCCCCC
Q psy11100 92 GLIIVWMLYKCND 104 (110)
Q Consensus 92 ~~i~~w~~~~~~~ 104 (110)
+.|..|+. +++.
T Consensus 251 ~~v~~~d~-~g~~ 262 (326)
T 2ghs_A 251 GAVDRYDT-DGNH 262 (326)
T ss_dssp TEEEEECT-TCCE
T ss_pred CEEEEECC-CCCE
Confidence 78999988 4544
No 217
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=96.78 E-value=0.036 Score=33.88 Aligned_cols=73 Identities=8% Similarity=-0.024 Sum_probs=53.6
Q ss_pred CCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecCCCc
Q psy11100 14 NTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGL 93 (110)
Q Consensus 14 ~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~~~ 93 (110)
...+.++++.++|...++...++.|.+++.. ... ...........+..+++.+++.++++...++.
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~-------------~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~ 84 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRI-------------KEFEVPTPDAKVMCLIVSSLGDIWFTENGANK 84 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-------------EEEECSSTTCCEEEEEECTTSCEEEEETTTTE
T ss_pred CCCcceeeECCCCCEEEEcCCCCeEEEECCC-Cce-------------EEEECCCCCCcceeEEECCCCCEEEEecCCCe
Confidence 4578899999999977776677889999877 430 11112223356889999999998877777788
Q ss_pred EEEEeCC
Q psy11100 94 IIVWMLY 100 (110)
Q Consensus 94 i~~w~~~ 100 (110)
|..+|..
T Consensus 85 v~~~d~~ 91 (300)
T 2qc5_A 85 IGKLSKK 91 (300)
T ss_dssp EEEECTT
T ss_pred EEEECCC
Confidence 9988876
No 218
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=96.78 E-value=0.0026 Score=41.61 Aligned_cols=77 Identities=8% Similarity=-0.236 Sum_probs=52.9
Q ss_pred eccCCCCCceEEEEEecCCCEEEEEe----------cCCcEEEEEcCCCCCcCCcccccccceeeeEEeecc-------C
Q psy11100 8 KIAIPNNTKVNCLAWHQNQGWIAVGG----------DDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGH-------S 70 (110)
Q Consensus 8 ~~~~~h~~~v~~~~~~p~~~~l~~~~----------~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 70 (110)
++..+.. + .+.++||++.+..++ .++.|.++|..+.. ....+... .
T Consensus 61 ~i~vG~~-P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~--------------vv~~I~v~~~~~~~~g 123 (368)
T 1mda_H 61 HSLGAFL-S--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFL--------------PIADIELPDAPRFSVG 123 (368)
T ss_dssp EEEECTT-C--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCC--------------EEEEEEETTSCSCCBS
T ss_pred EEeCCCC-C--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCC--------------EEEEEECCCccccccC
Confidence 3444443 3 689999999877775 36789999999876 44444321 1
Q ss_pred CCeEEEEEcCCCCeEEEecC--CCcEEE--EeCCC
Q psy11100 71 GKVRAIIWNEQYEKLTSSDE--TGLIIV--WMLYK 101 (110)
Q Consensus 71 ~~v~~~~~s~~~~~l~s~~~--~~~i~~--w~~~~ 101 (110)
.....++++|+|++++.+.. +..+.+ +|..+
T Consensus 124 ~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 124 PRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp CCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred CCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 23457899999998776653 456888 88755
No 219
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=96.71 E-value=0.023 Score=36.27 Aligned_cols=80 Identities=9% Similarity=-0.105 Sum_probs=53.7
Q ss_pred CCCCceEEEEEecCCCEEEEEec-----CCcEEEEEcCCCCCcCCcccccccceeeeEEeec------cCCCeEEEEEcC
Q psy11100 12 PNNTKVNCLAWHQNQGWIAVGGD-----DGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQG------HSGKVRAIIWNE 80 (110)
Q Consensus 12 ~h~~~v~~~~~~p~~~~l~~~~~-----~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~v~~~~~s~ 80 (110)
++...+..++++++|++.++-.. +..|.+||+.++. ....+.. +...+..+++++
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~--------------~~~~~~~~~~~~~~~~~~~~v~vd~ 129 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQ--------------LSRVIYLPPPITLSNSFVNDLAVDL 129 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTE--------------EEEEEECCTTTSCTTCCCCEEEEET
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCe--------------EEEEEECChhhcccccccceEEEec
Confidence 34567899999999886555433 4688999988664 2232321 224567899998
Q ss_pred CCCe-EEEec---CCCcEEEEeCCCCCCh
Q psy11100 81 QYEK-LTSSD---ETGLIIVWMLYKCNDD 105 (110)
Q Consensus 81 ~~~~-l~s~~---~~~~i~~w~~~~~~~~ 105 (110)
++.. +++-. .++.|.+||+.+++..
T Consensus 130 ~~g~~yvtd~~~~~~~~i~v~d~~~g~~~ 158 (343)
T 2qe8_A 130 IHNFVYISDPAPDDKAALIRVDLQTGLAA 158 (343)
T ss_dssp TTTEEEEEECCSGGGCEEEEEETTTCCEE
T ss_pred CCCEEEEEcCccCCCCeEEEEECCCCCEE
Confidence 6544 55544 5788999999877643
No 220
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=96.68 E-value=0.044 Score=33.48 Aligned_cols=72 Identities=13% Similarity=-0.037 Sum_probs=51.4
Q ss_pred CceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecCCCcE
Q psy11100 15 TKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLI 94 (110)
Q Consensus 15 ~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~~~i 94 (110)
..+..+++.++|...++...++.|..+|.. +. . ...........+..+++.+++.++++...++.|
T Consensus 62 ~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~------------~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i 127 (300)
T 2qc5_A 62 AKVMCLIVSSLGDIWFTENGANKIGKLSKK-GG------------F-TEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRI 127 (300)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-SC------------E-EEEECSSTTCCEEEEEECSTTCEEEEETTTTEE
T ss_pred CcceeEEECCCCCEEEEecCCCeEEEECCC-CC------------e-EEecCCCCCCCCccceECCCCCEEEEccCCCeE
Confidence 568889999999877766667788888877 43 0 111122233568899999999988777767888
Q ss_pred EEEeCC
Q psy11100 95 IVWMLY 100 (110)
Q Consensus 95 ~~w~~~ 100 (110)
..++..
T Consensus 128 ~~~~~~ 133 (300)
T 2qc5_A 128 GKLTAD 133 (300)
T ss_dssp EEECTT
T ss_pred EEECCC
Confidence 888876
No 221
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=96.57 E-value=0.016 Score=38.26 Aligned_cols=76 Identities=14% Similarity=0.096 Sum_probs=52.1
Q ss_pred EEEEecCCCEEEEEec----------CCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCC-eEEE
Q psy11100 19 CLAWHQNQGWIAVGGD----------DGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYE-KLTS 87 (110)
Q Consensus 19 ~~~~~p~~~~l~~~~~----------~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s 87 (110)
.++++|++..+..... .+.|.+.|..+.. .+..+.-- ..+..++++++++ .|+.
T Consensus 284 ~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~k--------------v~~~i~vg-~~~~~lavs~D~~~~ly~ 348 (386)
T 3sjl_D 284 QVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGE--------------RLAKFEMG-HEIDSINVSQDEKPLLYA 348 (386)
T ss_dssp CEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCC--------------EEEEEEEE-EEECEEEECSSSSCEEEE
T ss_pred eeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCe--------------EEEEEECC-CCcceEEECCCCCeEEEE
Confidence 3666888776655432 2457788888776 44444321 3567899999997 5554
Q ss_pred -ecCCCcEEEEeCCCCCChhhhh
Q psy11100 88 -SDETGLIIVWMLYKCNDDDEWK 109 (110)
Q Consensus 88 -~~~~~~i~~w~~~~~~~~~~~~ 109 (110)
...++.|.++|..+++.+..++
T Consensus 349 tn~~~~~VsViD~~t~k~~~~i~ 371 (386)
T 3sjl_D 349 LSTGDKTLYIHDAESGEELRSVN 371 (386)
T ss_dssp EETTTTEEEEEETTTCCEEEEEC
T ss_pred EcCCCCeEEEEECCCCcEEEEec
Confidence 4568999999999998776553
No 222
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=96.40 E-value=0.073 Score=35.01 Aligned_cols=69 Identities=13% Similarity=0.132 Sum_probs=50.1
Q ss_pred ceEEEEEecCCCEEEEEe-cCCcEEEEEcCCCCCcCCcccccccceeeeEEeecc---------------CCCeEEEEEc
Q psy11100 16 KVNCLAWHQNQGWIAVGG-DDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGH---------------SGKVRAIIWN 79 (110)
Q Consensus 16 ~v~~~~~~p~~~~l~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~v~~~~~s 79 (110)
....++++|+|.+.++-. .++.|+.|+...+. +.++.++ -.....++++
T Consensus 324 ~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~---------------v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd 388 (409)
T 3hrp_A 324 QPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGY---------------VSTVAGQVDVASQIDGTPLEATFNYPYDICYD 388 (409)
T ss_dssp SEEEEEECTTCCEEEEETTTTCEEEEEETTTTE---------------EEEEEECTTCBSCCCBSTTTCCBSSEEEEEEC
T ss_pred CCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCE---------------EEEEeCCCCCCCcCCCChhceEeCCceEEEEc
Confidence 467899999999777766 67889999965543 1222221 2457899999
Q ss_pred CCCCeEEEecCCCcEEEEeC
Q psy11100 80 EQYEKLTSSDETGLIIVWML 99 (110)
Q Consensus 80 ~~~~~l~s~~~~~~i~~w~~ 99 (110)
+++.++++-..++.|+.+.+
T Consensus 389 ~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 389 GEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp SSSEEEEEESTTCEEEEEEE
T ss_pred CCCCEEEEECCCCeEEEEEe
Confidence 99888888888888887765
No 223
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=96.21 E-value=0.03 Score=34.95 Aligned_cols=32 Identities=9% Similarity=0.067 Sum_probs=23.7
Q ss_pred CCeEEEEEcCCCCeEEEecCC------CcEEEEeCCCC
Q psy11100 71 GKVRAIIWNEQYEKLTSSDET------GLIIVWMLYKC 102 (110)
Q Consensus 71 ~~v~~~~~s~~~~~l~s~~~~------~~i~~w~~~~~ 102 (110)
...+.++|+|++..+..+... +.|..|++..+
T Consensus 188 ~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~ 225 (305)
T 3dr2_A 188 DHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDG 225 (305)
T ss_dssp SSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETT
T ss_pred CCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCC
Confidence 456789999999976655543 68999987643
No 224
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=96.16 E-value=0.014 Score=41.33 Aligned_cols=72 Identities=13% Similarity=0.213 Sum_probs=46.2
Q ss_pred ceEEEEEe-cCCCEEEEEec-CC----cEEEEEcCCC-CCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEe
Q psy11100 16 KVNCLAWH-QNQGWIAVGGD-DG----LLKVLKLDTG-KESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSS 88 (110)
Q Consensus 16 ~v~~~~~~-p~~~~l~~~~~-~~----~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 88 (110)
.+...+|| |||+.++.+.. +| .|+++|+..+ . .. ...+. .....++|+|+|+.|+..
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~----~l---------~~~~~---~~~~~~~WspDg~~l~y~ 238 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQ----TI---------ADKVS---GTNGEIVWGPDHTSLFYV 238 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTC----CC---------CCCEE---EECSCCEECSSTTEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCE----eC---------Ccccc---CceeeEEEecCCCEEEEE
Confidence 57789999 99998876543 33 4899998876 4 00 00111 112468899999876655
Q ss_pred cCC-----CcEEEEeCCCCC
Q psy11100 89 DET-----GLIIVWMLYKCN 103 (110)
Q Consensus 89 ~~~-----~~i~~w~~~~~~ 103 (110)
..+ ..|..+++.++.
T Consensus 239 ~~d~~~~~~~v~~~~lgt~~ 258 (751)
T 2xe4_A 239 TKDETLRENKVWRHVMGKLQ 258 (751)
T ss_dssp EECTTCCEEEEEEEETTSCG
T ss_pred EECCCCCCCEEEEEECCCCc
Confidence 433 257777877654
No 225
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=96.01 E-value=0.083 Score=37.03 Aligned_cols=74 Identities=14% Similarity=0.062 Sum_probs=47.3
Q ss_pred EEEEEecCCCEEEEEecCCc-------------EEEEEcCCCCCcCCcccccccceeeeEEeec-cCCCeEEEEEcCCCC
Q psy11100 18 NCLAWHQNQGWIAVGGDDGL-------------LKVLKLDTGKESTGQVAAANVNLAMNQSLQG-HSGKVRAIIWNEQYE 83 (110)
Q Consensus 18 ~~~~~~p~~~~l~~~~~~~~-------------v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~ 83 (110)
..++|+ ||+.|+.+..+.. |++|++.....+ . ..+..... +...+..+.|+|+|+
T Consensus 178 ~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~--~--------~~v~~~~~~~~~~~~~~~~SpDg~ 246 (693)
T 3iuj_A 178 SGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQED--D--------RLVFGAIPAQHHRYVGATVTEDDR 246 (693)
T ss_dssp CCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGG--C--------EEEESCSGGGCCSEEEEEECTTSC
T ss_pred ccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCccc--c--------eEEEecCCCCCeEEEEEEEcCCCC
Confidence 457899 9998888877643 888887754300 0 01222222 334567899999999
Q ss_pred eEE-Eec---CCCcEEEEeCCCC
Q psy11100 84 KLT-SSD---ETGLIIVWMLYKC 102 (110)
Q Consensus 84 ~l~-s~~---~~~~i~~w~~~~~ 102 (110)
.++ +.. .++.|+++|+.++
T Consensus 247 ~l~~~~~~~~~~~~i~~~d~~~~ 269 (693)
T 3iuj_A 247 FLLISAANSTSGNRLYVKDLSQE 269 (693)
T ss_dssp EEEEEEESSSSCCEEEEEETTST
T ss_pred EEEEEEccCCCCcEEEEEECCCC
Confidence 854 333 2357899998765
No 226
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=95.75 E-value=0.087 Score=32.98 Aligned_cols=73 Identities=8% Similarity=-0.117 Sum_probs=49.9
Q ss_pred EEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeecc-----CCCeEEEEEcCCCCeEEEecCCCcEE
Q psy11100 21 AWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGH-----SGKVRAIIWNEQYEKLTSSDETGLII 95 (110)
Q Consensus 21 ~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~s~~~~~l~s~~~~~~i~ 95 (110)
.+++||..+..+..++.+.++|..+.. ....+.-. -...+.+.|. ++..++....++.|.
T Consensus 111 glt~Dg~~l~vs~gs~~l~viD~~t~~--------------v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~ 175 (266)
T 2iwa_A 111 GLATDGKILYGSDGTSILYEIDPHTFK--------------LIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIA 175 (266)
T ss_dssp EEEECSSSEEEECSSSEEEEECTTTCC--------------EEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEE
T ss_pred EEEECCCEEEEECCCCeEEEEECCCCc--------------EEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEE
Confidence 356677766666667788888887654 23333321 1236677887 777777777788999
Q ss_pred EEeCCCCCChhhh
Q psy11100 96 VWMLYKCNDDDEW 108 (110)
Q Consensus 96 ~w~~~~~~~~~~~ 108 (110)
+.|+.+++.+..+
T Consensus 176 vID~~tg~V~~~I 188 (266)
T 2iwa_A 176 RISAKDGTLLGWI 188 (266)
T ss_dssp EEETTTCCEEEEE
T ss_pred EEECCCCcEEEEE
Confidence 9999998875443
No 227
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=95.48 E-value=0.24 Score=30.98 Aligned_cols=73 Identities=11% Similarity=0.105 Sum_probs=47.0
Q ss_pred CceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecCCC--
Q psy11100 15 TKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETG-- 92 (110)
Q Consensus 15 ~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~~-- 92 (110)
.....++|+++|++.++-...+.|..++..... ..... .......+++.++|.++++.....
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~---------------~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~ 95 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQ---------------QIHAT-VEGKVSGLAFTSNGDLVATGWNADSI 95 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCE---------------EEEEE-CSSEEEEEEECTTSCEEEEEECTTSC
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCce---------------EEEEe-CCCCceeEEEcCCCcEEEEeccCCcc
Confidence 456788999999866666567788888765432 11121 224578899999998765543322
Q ss_pred cEEEEeCCCCC
Q psy11100 93 LIIVWMLYKCN 103 (110)
Q Consensus 93 ~i~~w~~~~~~ 103 (110)
.|..++..+++
T Consensus 96 ~v~~~d~~~g~ 106 (306)
T 2p4o_A 96 PVVSLVKSDGT 106 (306)
T ss_dssp EEEEEECTTSC
T ss_pred eEEEEcCCCCe
Confidence 36666666655
No 228
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=95.41 E-value=0.11 Score=36.85 Aligned_cols=72 Identities=10% Similarity=-0.039 Sum_probs=44.1
Q ss_pred EEEEecCCCEEEEEecCC-----cEEEEEcCCCCCcCCcccccccceeeeEEee-ccCCCeEEEEEcCCCCeEEEec---
Q psy11100 19 CLAWHQNQGWIAVGGDDG-----LLKVLKLDTGKESTGQVAAANVNLAMNQSLQ-GHSGKVRAIIWNEQYEKLTSSD--- 89 (110)
Q Consensus 19 ~~~~~p~~~~l~~~~~~~-----~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~s~~--- 89 (110)
.+.|+|||+.|+....+. .|.++++..... . ....+. ........+.|||+|+.|+...
T Consensus 225 ~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~---~---------~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~ 292 (751)
T 2xe4_A 225 EIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQS---E---------DVCLYEEHNPLFSAFMYKAADTNTLCIGSQSP 292 (751)
T ss_dssp CCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGG---G---------CEEEEECCCTTCEEEEEECTTSSEEEEEEECS
T ss_pred eEEEecCCCEEEEEEECCCCCCCEEEEEECCCCch---h---------cEEEEecCCCceEEEEEECCCCCEEEEEecCC
Confidence 578999998887776542 466666654320 0 011122 2223456789999999865443
Q ss_pred CCCcEEEEeCCCC
Q psy11100 90 ETGLIIVWMLYKC 102 (110)
Q Consensus 90 ~~~~i~~w~~~~~ 102 (110)
....|.++|+.++
T Consensus 293 ~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 293 ETAEVHLLDLRKG 305 (751)
T ss_dssp SCEEEEEEESSSC
T ss_pred CCceEEEEECCCC
Confidence 2345888888765
No 229
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=95.39 E-value=0.045 Score=38.53 Aligned_cols=32 Identities=9% Similarity=-0.028 Sum_probs=26.0
Q ss_pred EEcCCCCeEEEecCCCcEEEEeCCCCCChhhh
Q psy11100 77 IWNEQYEKLTSSDETGLIIVWMLYKCNDDDEW 108 (110)
Q Consensus 77 ~~s~~~~~l~s~~~~~~i~~w~~~~~~~~~~~ 108 (110)
.+...+.++..++.|+.|+.||.++|+.+.++
T Consensus 481 ~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~ 512 (689)
T 1yiq_A 481 TLSTAGNLVFEGSADGRVIAYAADTGEKLWEQ 512 (689)
T ss_dssp EEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred cceECCCEEEEECCCCcEEEEECCCCccceee
Confidence 44556778888889999999999999887654
No 230
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.32 E-value=0.22 Score=33.57 Aligned_cols=83 Identities=6% Similarity=0.098 Sum_probs=53.7
Q ss_pred ceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeec------cCCCeEEEEEcCC---CCeEE
Q psy11100 16 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQG------HSGKVRAIIWNEQ---YEKLT 86 (110)
Q Consensus 16 ~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~v~~~~~s~~---~~~l~ 86 (110)
.+..+..+|+|.+||..+ +..|.+..+......... .......+. +.+.- ....|..+.|+|. +..++
T Consensus 67 ~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~-~~~~~~~q~-~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LV 143 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVED-VSIQDAFQI-FHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIV 143 (452)
T ss_dssp TTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCC-HHHHHTTEE-EEEEGGGCC--CCCCEEEEEECTTBGGGCEEE
T ss_pred ceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcc-cccccccce-eEEEcCCcccCCCCceeEEEeccccCCCCeEE
Confidence 567789999999998875 457888888843211110 000011111 11211 2467999999996 44688
Q ss_pred EecCCCcEEEEeCCC
Q psy11100 87 SSDETGLIIVWMLYK 101 (110)
Q Consensus 87 s~~~~~~i~~w~~~~ 101 (110)
.-..|+.|++||+..
T Consensus 144 VLtsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 144 VLKEDDTITMFDILN 158 (452)
T ss_dssp EEETTSCEEEEETTC
T ss_pred EEecCCEEEEEEccc
Confidence 888999999999986
No 231
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=95.29 E-value=0.089 Score=35.56 Aligned_cols=76 Identities=16% Similarity=0.080 Sum_probs=51.2
Q ss_pred ceEEEEEecCCCEEEEEecC------CcEEEEEcCCCCCcCCcccccccceeeeEEeecc---CCCeEEEEEcCCCCeEE
Q psy11100 16 KVNCLAWHQNQGWIAVGGDD------GLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGH---SGKVRAIIWNEQYEKLT 86 (110)
Q Consensus 16 ~v~~~~~~p~~~~l~~~~~~------~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~v~~~~~s~~~~~l~ 86 (110)
....+.+.|+| .+++...+ +.+.+.|..+.. ...++... ...-..+.|+|+++.++
T Consensus 139 ~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~--------------v~~~~~~~~~~~~~~Yd~~~~p~~~~mv 203 (462)
T 2ece_A 139 RLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFE--------------PLGKWEIDRGDQYLAYDFWWNLPNEVLV 203 (462)
T ss_dssp EEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCC--------------EEEECCSBCTTCCCCCCEEEETTTTEEE
T ss_pred cccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCe--------------EEEEEccCCCCccccceEEECCCCCEEE
Confidence 34456788999 65555444 578888888765 44444321 12234688899999887
Q ss_pred Eec-------------------CCCcEEEEeCCCCCChh
Q psy11100 87 SSD-------------------ETGLIIVWMLYKCNDDD 106 (110)
Q Consensus 87 s~~-------------------~~~~i~~w~~~~~~~~~ 106 (110)
++. ....|.+||+.+++.+.
T Consensus 204 sS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~ 242 (462)
T 2ece_A 204 SSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIH 242 (462)
T ss_dssp ECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEE
T ss_pred EccCcCccccccccchhhhhhccCCEEEEEECCCCcEee
Confidence 774 36789999998765443
No 232
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=95.26 E-value=0.16 Score=31.94 Aligned_cols=70 Identities=6% Similarity=-0.132 Sum_probs=47.0
Q ss_pred ecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeecc-----CCCeEEEEEcCCCCeEEEecCCCcEEEE
Q psy11100 23 HQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGH-----SGKVRAIIWNEQYEKLTSSDETGLIIVW 97 (110)
Q Consensus 23 ~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~s~~~~~l~s~~~~~~i~~w 97 (110)
++++..|..+..++.+.++|..+.. ....+... -..++.+.|. +|+.++....+..|.+.
T Consensus 142 t~Dg~~L~vSdGs~~l~~iDp~T~~--------------v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vI 206 (268)
T 3nok_A 142 CYWNGKLVRSDGGTMLTFHEPDGFA--------------LVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEI 206 (268)
T ss_dssp EEETTEEEEECSSSEEEEECTTTCC--------------EEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEE
T ss_pred ecCCCEEEEECCCCEEEEEcCCCCe--------------EEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEE
Confidence 3566666666666777777776654 23333321 1245677776 77778888788899999
Q ss_pred eCCCCCChhh
Q psy11100 98 MLYKCNDDDE 107 (110)
Q Consensus 98 ~~~~~~~~~~ 107 (110)
|+.+++.+..
T Consensus 207 Dp~TG~V~~~ 216 (268)
T 3nok_A 207 DPATGTVVGV 216 (268)
T ss_dssp CTTTCBEEEE
T ss_pred eCCCCcEEEE
Confidence 9999987654
No 233
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=95.25 E-value=0.041 Score=38.32 Aligned_cols=82 Identities=7% Similarity=-0.017 Sum_probs=51.6
Q ss_pred ceEEEEEecCCCEEEEE-ecCCcEEEEEcCCCCCc-CCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecCCCc
Q psy11100 16 KVNCLAWHQNQGWIAVG-GDDGLLKVLKLDTGKES-TGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGL 93 (110)
Q Consensus 16 ~v~~~~~~p~~~~l~~~-~~~~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~~~ 93 (110)
...++.++|||+++... ..+..+.++|+.+.... .+..... .. ..... .-......++|+|+|....+.-.+++
T Consensus 278 ~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~-~~--v~~~v-~vG~gP~h~aF~~dG~aY~t~~ldsq 353 (595)
T 1fwx_A 278 NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPR-SA--VVAEP-ELGLGPLHTAFDGRGNAYTSLFLDSQ 353 (595)
T ss_dssp SCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGG-GG--EEECC-BCCSCEEEEEECTTSEEEEEETTTTE
T ss_pred CceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcc-cc--eEEEc-CCCCCcceEEECCCCeEEEEEecCCc
Confidence 34568899999976555 45778999999854200 0000000 00 11111 12345778999999944667778999
Q ss_pred EEEEeCCC
Q psy11100 94 IIVWMLYK 101 (110)
Q Consensus 94 i~~w~~~~ 101 (110)
|.+||+.+
T Consensus 354 V~kwdi~~ 361 (595)
T 1fwx_A 354 VVKWNIED 361 (595)
T ss_dssp EEEEEHHH
T ss_pred EEEEEhhH
Confidence 99999876
No 234
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=95.14 E-value=0.045 Score=38.49 Aligned_cols=34 Identities=6% Similarity=-0.091 Sum_probs=26.6
Q ss_pred EEEEcCCCCeEEEecCCCcEEEEeCCCCCChhhh
Q psy11100 75 AIIWNEQYEKLTSSDETGLIIVWMLYKCNDDDEW 108 (110)
Q Consensus 75 ~~~~s~~~~~l~s~~~~~~i~~w~~~~~~~~~~~ 108 (110)
...+...+..++.++.++.+++||.++|+.+.++
T Consensus 481 ~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~ 514 (677)
T 1kb0_A 481 GGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEA 514 (677)
T ss_dssp CCEEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CcceEeCCCEEEEECCCCcEEEEECCCCceeeee
Confidence 3345567777777889999999999999877654
No 235
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=95.03 E-value=0.14 Score=32.01 Aligned_cols=35 Identities=11% Similarity=0.024 Sum_probs=27.1
Q ss_pred CeEEEEEcCCCCeEEEecCCCcEEEEeCCCCCChhh
Q psy11100 72 KVRAIIWNEQYEKLTSSDETGLIIVWMLYKCNDDDE 107 (110)
Q Consensus 72 ~v~~~~~s~~~~~l~s~~~~~~i~~w~~~~~~~~~~ 107 (110)
.++.+.|. +|+.++....+..|.+.|+.+++.+..
T Consensus 173 ~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~ 207 (262)
T 3nol_A 173 ELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGI 207 (262)
T ss_dssp CEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEE
T ss_pred ccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEE
Confidence 34567776 677788887888999999999987644
No 236
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=94.96 E-value=0.36 Score=30.17 Aligned_cols=40 Identities=18% Similarity=0.222 Sum_probs=27.3
Q ss_pred eccCCCCCceEEEEEecCCCEEEEEec--CCcEEEEEcCCCC
Q psy11100 8 KIAIPNNTKVNCLAWHQNQGWIAVGGD--DGLLKVLKLDTGK 47 (110)
Q Consensus 8 ~~~~~h~~~v~~~~~~p~~~~l~~~~~--~~~v~~~~~~~~~ 47 (110)
+++.+......-+.|+|++.+..+.+. ++.|.+.|..++.
T Consensus 14 ~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~ 55 (266)
T 2iwa_A 14 EFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGK 55 (266)
T ss_dssp EEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCC
T ss_pred EEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCC
Confidence 344443345678999998765555443 5789999998876
No 237
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=94.80 E-value=0.28 Score=30.30 Aligned_cols=70 Identities=13% Similarity=0.044 Sum_probs=45.6
Q ss_pred ecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccC-----CCeEEEEEcCCCCeEEEecCCCcEEEE
Q psy11100 23 HQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHS-----GKVRAIIWNEQYEKLTSSDETGLIIVW 97 (110)
Q Consensus 23 ~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~s~~~~~l~s~~~~~~i~~w 97 (110)
.+++..|..+..++.+.++|..+.. ....+.... ..++.+.|. +|+.++....+..|.+.
T Consensus 111 t~dg~~L~vSdgs~~l~~iDp~t~~--------------~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vI 175 (243)
T 3mbr_X 111 TSDDSHLYMSDGTAVIRKLDPDTLQ--------------QVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARI 175 (243)
T ss_dssp EECSSCEEEECSSSEEEEECTTTCC--------------EEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEE
T ss_pred eeCCCEEEEECCCCeEEEEeCCCCe--------------EEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEE
Confidence 4566656666666778887777654 233333211 345566665 67777777778899999
Q ss_pred eCCCCCChhh
Q psy11100 98 MLYKCNDDDE 107 (110)
Q Consensus 98 ~~~~~~~~~~ 107 (110)
|+++|+.+..
T Consensus 176 Dp~tG~V~~~ 185 (243)
T 3mbr_X 176 DPASGKVVAW 185 (243)
T ss_dssp CTTTCBEEEE
T ss_pred ECCCCCEEEE
Confidence 9999887644
No 238
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=94.77 E-value=0.22 Score=33.70 Aligned_cols=70 Identities=10% Similarity=0.045 Sum_probs=46.6
Q ss_pred EEEEEecCCCEEEEEe-------------------cCCcEEEEEcCCCCCcCCcccccccceeeeEEeec--cCCCeEEE
Q psy11100 18 NCLAWHQNQGWIAVGG-------------------DDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQG--HSGKVRAI 76 (110)
Q Consensus 18 ~~~~~~p~~~~l~~~~-------------------~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~ 76 (110)
..+-|+|+++.+++.. .+..|.+||+.... ...++.- .......+
T Consensus 191 Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k--------------~~~tI~vg~~g~~P~~i 256 (462)
T 2ece_A 191 YDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRK--------------RIHSLTLGEENRMALEL 256 (462)
T ss_dssp CCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTE--------------EEEEEESCTTEEEEEEE
T ss_pred ceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCc--------------EeeEEecCCCCCcccee
Confidence 3577899999888774 36789999998764 3344433 11234556
Q ss_pred EE--cCCCCe-EEEec-----CCCcEEEEeCCC
Q psy11100 77 IW--NEQYEK-LTSSD-----ETGLIIVWMLYK 101 (110)
Q Consensus 77 ~~--s~~~~~-l~s~~-----~~~~i~~w~~~~ 101 (110)
+| +|++.. ++.+. .+++|.+|....
T Consensus 257 ~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~ 289 (462)
T 2ece_A 257 RPLHDPTKLMGFINMVVSLKDLSSSIWLWFYED 289 (462)
T ss_dssp EECSSTTCCEEEEEEEEETTTCCEEEEEEEEET
T ss_pred EeeECCCCCEEEEEEeeeccCCCceEEEEEecC
Confidence 56 999998 44555 677887765543
No 239
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=94.43 E-value=0.43 Score=29.98 Aligned_cols=32 Identities=22% Similarity=0.451 Sum_probs=23.6
Q ss_pred CceEEEEEecCCCEEEEEecCCcEEEEEcCCCC
Q psy11100 15 TKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGK 47 (110)
Q Consensus 15 ~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~ 47 (110)
.....+.|+ ++.+..+.+.++.|+++|+.+++
T Consensus 55 ~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgk 86 (268)
T 3nok_A 55 AFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQ 86 (268)
T ss_dssp CCEEEEEEE-TTEEEEEETTTTEEEECCSSCSS
T ss_pred cccceEEEE-CCEEEEEcCCCCEEEEEECCCCc
Confidence 344667776 35666777778889999998876
No 240
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=94.33 E-value=0.21 Score=31.74 Aligned_cols=64 Identities=2% Similarity=-0.057 Sum_probs=44.5
Q ss_pred CceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeec-cCCCeEEEEEcCCCCeEEEecCCC
Q psy11100 15 TKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQG-HSGKVRAIIWNEQYEKLTSSDETG 92 (110)
Q Consensus 15 ~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~~~~ 92 (110)
+....++++++|.+.++...++.|.+|+...+. ....... +-.....+++.+++.++++.+..+
T Consensus 248 g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~--------------~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~ 312 (343)
T 2qe8_A 248 PICDGISIDKDHNIYVGDLAHSAIGVITSADRA--------------YKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLH 312 (343)
T ss_dssp CSCSCEEECTTCCEEEEEGGGTEEEEEETTTTE--------------EEEEEECGGGSCEEEEEECTTSCEEEEECCGG
T ss_pred CCCceEEECCCCCEEEEccCCCeEEEEECCCCC--------------EEEEEECCceecCCeeEECCCCcEEEEeCccc
Confidence 345568899999988888888899999984343 1111222 245678999999998877766443
No 241
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=94.21 E-value=0.0083 Score=38.88 Aligned_cols=70 Identities=9% Similarity=0.006 Sum_probs=35.6
Q ss_pred EEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCC---CeEEEecCCCcEEEE
Q psy11100 21 AWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQY---EKLTSSDETGLIIVW 97 (110)
Q Consensus 21 ~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~---~~l~s~~~~~~i~~w 97 (110)
.++|++..++.++.++.+..||..++. ..-.+.... .....++.+. ..++.++.++.+..|
T Consensus 125 ~~~p~~~~v~~~~~dg~v~a~d~~tG~--------------~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~ 188 (369)
T 2hz6_A 125 SLSPSTSLLYLGRTEYTITMYDTKTRE--------------LRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTV 188 (369)
T ss_dssp --------EEEEEEEEEEECCCSSSSS--------------CCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEE
T ss_pred cccccCCEEEEEecCCEEEEEECCCCC--------------EEEeEeccc--ccCccccCCccccceEEEECCCCEEEEE
Confidence 345566667777777888888877654 111111000 1112222221 345567778999999
Q ss_pred eCCCCCChh
Q psy11100 98 MLYKCNDDD 106 (110)
Q Consensus 98 ~~~~~~~~~ 106 (110)
|..+|+.+.
T Consensus 189 d~~tG~~~W 197 (369)
T 2hz6_A 189 DSESGDVLW 197 (369)
T ss_dssp CTTTCCEEE
T ss_pred ECCCCcEEE
Confidence 998887643
No 242
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=93.38 E-value=0.86 Score=28.50 Aligned_cols=31 Identities=16% Similarity=0.343 Sum_probs=22.8
Q ss_pred ceEEEEEecCCCEEEEEecCC--cEEEEEcCCCC
Q psy11100 16 KVNCLAWHQNQGWIAVGGDDG--LLKVLKLDTGK 47 (110)
Q Consensus 16 ~v~~~~~~p~~~~l~~~~~~~--~v~~~~~~~~~ 47 (110)
....+.|+ ++.+..+.+.+| .|+++|+.++.
T Consensus 44 ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgk 76 (262)
T 3nol_A 44 FTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGK 76 (262)
T ss_dssp EEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCC
T ss_pred ccceEEEE-CCEEEEECCCCCCceEEEEECCCCc
Confidence 34678888 676666666665 79999998876
No 243
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=92.91 E-value=1.4 Score=29.74 Aligned_cols=80 Identities=14% Similarity=0.237 Sum_probs=50.7
Q ss_pred CCceEEEEEecC---CCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEE--e
Q psy11100 14 NTKVNCLAWHQN---QGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTS--S 88 (110)
Q Consensus 14 ~~~v~~~~~~p~---~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s--~ 88 (110)
.++|..+.|+|- +..|++-..|+.|++||+....+.+...+... ..+........|.+++|..++--|.. .
T Consensus 124 ~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~----~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~ 199 (452)
T 3pbp_A 124 KSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPN----NSFGLDARVNDITDLEFSKDGLTLYCLNT 199 (452)
T ss_dssp CCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCC----SEEESCSSCCCEEEEEECTTSSCEEEEEC
T ss_pred CCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccc----cccCCCcccceEEEEEEcCCCcEEEEEec
Confidence 578999999994 56888989999999999997432111111000 01122233467889999886554554 4
Q ss_pred cCCCcEEEE
Q psy11100 89 DETGLIIVW 97 (110)
Q Consensus 89 ~~~~~i~~w 97 (110)
...|.|+-.
T Consensus 200 t~~GDIYAl 208 (452)
T 3pbp_A 200 TEGGDIFAF 208 (452)
T ss_dssp TTSCEEEEE
T ss_pred CCCCCEEEE
Confidence 466776643
No 244
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=92.52 E-value=1.5 Score=29.04 Aligned_cols=70 Identities=13% Similarity=-0.028 Sum_probs=44.8
Q ss_pred eEEEEEec-CCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEee-ccCCCeEEEEEcCCCCe-EEEecCCCc
Q psy11100 17 VNCLAWHQ-NQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQ-GHSGKVRAIIWNEQYEK-LTSSDETGL 93 (110)
Q Consensus 17 v~~~~~~p-~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~-l~s~~~~~~ 93 (110)
...++++| +|.+.++-...+.|..++..... ...... ........++|+|++.. +++-...+.
T Consensus 228 p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~--------------~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~ 293 (430)
T 3tc9_A 228 CNGAETHPINGELYFNSWNAGQVFRYDFTTQE--------------TTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHY 293 (430)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEEETTTTE--------------EEEEEECSSSSCCEEEEECTTSSEEEEEETTTTE
T ss_pred ceEEEEeCCCCEEEEEECCCCEEEEEECCCCc--------------EEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCE
Confidence 44567888 67766665556778888776543 101111 11234678999999994 556566788
Q ss_pred EEEEeCC
Q psy11100 94 IIVWMLY 100 (110)
Q Consensus 94 i~~w~~~ 100 (110)
|..++..
T Consensus 294 I~~~~~d 300 (430)
T 3tc9_A 294 ILRSDYD 300 (430)
T ss_dssp EEEEEEE
T ss_pred EEEEeCC
Confidence 8888765
No 245
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=91.28 E-value=1.3 Score=30.82 Aligned_cols=74 Identities=8% Similarity=-0.054 Sum_probs=45.0
Q ss_pred EEEEec-CCCEEEEEecCC-----------cEEEEEcCCCCCcCCcccccccceeeeEEee-ccCCCeEEEEEcCCCCeE
Q psy11100 19 CLAWHQ-NQGWIAVGGDDG-----------LLKVLKLDTGKESTGQVAAANVNLAMNQSLQ-GHSGKVRAIIWNEQYEKL 85 (110)
Q Consensus 19 ~~~~~p-~~~~l~~~~~~~-----------~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l 85 (110)
..++.| +++.++.|+.+. .+.+||..... +..+.... .+.......++..++.++
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~------------w~~~~~~~~~~~~~~~~~~~~~~g~ly 257 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGI------------VSDRTVTVTKHDMFCPGISMDGNGQIV 257 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCC------------BCCCEEEECSCCCSSCEEEECTTSCEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCc------------EEeCcccCCCCCCccccccCCCCCCEE
Confidence 445666 777777776432 46677776543 11111121 122233456777889998
Q ss_pred EEec-CCCcEEEEeCCCCCC
Q psy11100 86 TSSD-ETGLIIVWMLYKCND 104 (110)
Q Consensus 86 ~s~~-~~~~i~~w~~~~~~~ 104 (110)
+.++ .+..+.+||+.++.+
T Consensus 258 v~GG~~~~~v~~yd~~t~~W 277 (656)
T 1k3i_A 258 VTGGNDAKKTSLYDSSSDSW 277 (656)
T ss_dssp EECSSSTTCEEEEEGGGTEE
T ss_pred EeCCCCCCceEEecCcCCce
Confidence 8887 456799999887765
No 246
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=91.04 E-value=1.7 Score=30.52 Aligned_cols=31 Identities=3% Similarity=-0.048 Sum_probs=24.8
Q ss_pred CeEEEEEcCCCCe-EEEecCCCcEEEEeCCCC
Q psy11100 72 KVRAIIWNEQYEK-LTSSDETGLIIVWMLYKC 102 (110)
Q Consensus 72 ~v~~~~~s~~~~~-l~s~~~~~~i~~w~~~~~ 102 (110)
...++.++|||++ +++...+..+.++|+.+.
T Consensus 278 ~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~ 309 (595)
T 1fwx_A 278 NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRF 309 (595)
T ss_dssp SCCCEEECTTSSEEEEECTTSSBEEEEEGGGH
T ss_pred CceEEEEcCCCCEEEEeCCCCCeEEEEECccc
Confidence 4457899999998 555567889999999864
No 247
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=90.82 E-value=1.9 Score=26.88 Aligned_cols=30 Identities=10% Similarity=-0.087 Sum_probs=22.3
Q ss_pred CeEEEEEcCCCCe-EEEecCCCcEEEEeCCC
Q psy11100 72 KVRAIIWNEQYEK-LTSSDETGLIIVWMLYK 101 (110)
Q Consensus 72 ~v~~~~~s~~~~~-l~s~~~~~~i~~w~~~~ 101 (110)
..+.++|+|++.. +++-...+.|..+++..
T Consensus 186 ~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~ 216 (322)
T 2fp8_A 186 VPGGAEVSADSSFVLVAEFLSHQIVKYWLEG 216 (322)
T ss_dssp CCCEEEECTTSSEEEEEEGGGTEEEEEESSS
T ss_pred cCcceEECCCCCEEEEEeCCCCeEEEEECCC
Confidence 3457899999985 44545668899998875
No 248
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=89.57 E-value=4.2 Score=28.76 Aligned_cols=73 Identities=14% Similarity=0.094 Sum_probs=47.4
Q ss_pred EEEEecCCCEEEEEecCC-------------------cEEEEEcCCCCCcCCcccccccceeeeEEee--ccC-------
Q psy11100 19 CLAWHQNQGWIAVGGDDG-------------------LLKVLKLDTGKESTGQVAAANVNLAMNQSLQ--GHS------- 70 (110)
Q Consensus 19 ~~~~~p~~~~l~~~~~~~-------------------~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~------- 70 (110)
.++++|++..+..+..++ .|..+|..++. ..-.+. .|.
T Consensus 239 ~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~--------------~~W~~~~~~~d~wd~~~~ 304 (689)
T 1yiq_A 239 SFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGE--------------YVWHYQTTPGDAWDYTAT 304 (689)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCC--------------EEEEEESSTTCCSCCCCC
T ss_pred ceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCc--------------eeEeeecCCcccccccCC
Confidence 467888888877777665 38888988876 221221 121
Q ss_pred CCeEEEEEcCCCC---eEEEecCCCcEEEEeCCCCCCh
Q psy11100 71 GKVRAIIWNEQYE---KLTSSDETGLIIVWMLYKCNDD 105 (110)
Q Consensus 71 ~~v~~~~~s~~~~---~l~s~~~~~~i~~w~~~~~~~~ 105 (110)
..........+|. .++.++.+|.++++|..+|+.+
T Consensus 305 ~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l 342 (689)
T 1yiq_A 305 QHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELL 342 (689)
T ss_dssp SCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred CCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEe
Confidence 1222223333554 5788889999999999999875
No 249
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=89.14 E-value=0.81 Score=31.55 Aligned_cols=28 Identities=4% Similarity=-0.173 Sum_probs=21.6
Q ss_pred CCCeEEEecCCCcEEEEeCCCCCChhhh
Q psy11100 81 QYEKLTSSDETGLIIVWMLYKCNDDDEW 108 (110)
Q Consensus 81 ~~~~l~s~~~~~~i~~w~~~~~~~~~~~ 108 (110)
.+..+..++.++.|..+|.++|+.+.++
T Consensus 474 ~gg~v~~g~~dg~l~a~D~~tG~~lw~~ 501 (571)
T 2ad6_A 474 KGGLVWYATLDGYLKALDNKDGKELWNF 501 (571)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCCEEEEE
Confidence 4556666788999999999999876543
No 250
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=88.28 E-value=3.5 Score=29.05 Aligned_cols=77 Identities=13% Similarity=0.067 Sum_probs=47.8
Q ss_pred EEEEecCCCEEEEEecCC-------------------cEEEEEcCCCCCcCCcccccccceeeeEEeeccC-------CC
Q psy11100 19 CLAWHQNQGWIAVGGDDG-------------------LLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHS-------GK 72 (110)
Q Consensus 19 ~~~~~p~~~~l~~~~~~~-------------------~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 72 (110)
.++++|++..+..+..++ .|..+|..++.. ........|. ..
T Consensus 247 ~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~------------~W~~~~~~~d~wd~~~~~~ 314 (677)
T 1kb0_A 247 SMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKY------------KWHYQETPGDNWDYTSTQP 314 (677)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCE------------EEEEESSTTCCSCCCCCSC
T ss_pred ceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCE------------EEEEecCCCcccccccCCC
Confidence 467888888777666543 477788877650 0111111121 12
Q ss_pred eEEEEEcCCC---CeEEEecCCCcEEEEeCCCCCChhh
Q psy11100 73 VRAIIWNEQY---EKLTSSDETGLIIVWMLYKCNDDDE 107 (110)
Q Consensus 73 v~~~~~s~~~---~~l~s~~~~~~i~~w~~~~~~~~~~ 107 (110)
...+....+| ..++.++.+|.+.++|..+|+.+..
T Consensus 315 p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~ 352 (677)
T 1kb0_A 315 MILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISA 352 (677)
T ss_dssp CEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEE
T ss_pred cEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEecc
Confidence 2233334467 5688888999999999999987543
No 251
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=86.91 E-value=3.2 Score=25.58 Aligned_cols=26 Identities=23% Similarity=0.291 Sum_probs=14.8
Q ss_pred EEEEEecCCCEEEEEecCCcEEEEEcC
Q psy11100 18 NCLAWHQNQGWIAVGGDDGLLKVLKLD 44 (110)
Q Consensus 18 ~~~~~~p~~~~l~~~~~~~~v~~~~~~ 44 (110)
.++...+++. +..+..++.+..+|..
T Consensus 140 ~~~~~~~~g~-l~vgt~~~~l~~~d~~ 165 (330)
T 3hxj_A 140 ATPIVSEDGT-IYVGSNDNYLYAINPD 165 (330)
T ss_dssp SCCEECTTSC-EEEECTTSEEEEECTT
T ss_pred eeeEEcCCCE-EEEEcCCCEEEEECCC
Confidence 3344454555 4445556777777766
No 252
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=86.47 E-value=4.2 Score=25.30 Aligned_cols=32 Identities=9% Similarity=0.040 Sum_probs=24.2
Q ss_pred CceEEEEEecCCCEEEEEecCCcEEEEEcCCC
Q psy11100 15 TKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTG 46 (110)
Q Consensus 15 ~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~ 46 (110)
.....++++++|..+.++..++.|..|+....
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~ 50 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNS 50 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEEEECCTTT
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEEEECCCCC
Confidence 34566889999987777777888888877654
No 253
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=86.44 E-value=1.6 Score=26.91 Aligned_cols=75 Identities=4% Similarity=-0.097 Sum_probs=42.4
Q ss_pred CceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeecc-CCCeEEEEEcCCCCeEEEecCCCc
Q psy11100 15 TKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGH-SGKVRAIIWNEQYEKLTSSDETGL 93 (110)
Q Consensus 15 ~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~s~~~~~~ 93 (110)
..+.+++|+|+|.+-+. .++.+.-.+..+.. ...=.. ....+... -.....+.|.|+|.+.++ .|+.
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~---~~~W~~-----s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~ 108 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHD---NDNWMG-----RAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDK 108 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCST---TCCHHH-----HCEEEECSCGGGCSEEEECTTSCEEEE--ETTE
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCC---cccccc-----cccEecccccccceEEEECCCCCEEEe--CCCE
Confidence 46779999999996666 56665544433211 000000 01112111 111467888999998777 4588
Q ss_pred EEEEeCCC
Q psy11100 94 IIVWMLYK 101 (110)
Q Consensus 94 i~~w~~~~ 101 (110)
|+-++..+
T Consensus 109 iyr~~pP~ 116 (236)
T 1tl2_A 109 LYKASPPQ 116 (236)
T ss_dssp EEEESCCC
T ss_pred EEEeCCCc
Confidence 88887644
No 254
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=86.36 E-value=1 Score=33.13 Aligned_cols=35 Identities=14% Similarity=0.063 Sum_probs=29.9
Q ss_pred CeEEEEEcCCCCeEEEecCCCcEEEEeCCCCCChh
Q psy11100 72 KVRAIIWNEQYEKLTSSDETGLIIVWMLYKCNDDD 106 (110)
Q Consensus 72 ~v~~~~~s~~~~~l~s~~~~~~i~~w~~~~~~~~~ 106 (110)
.+.+++..++..++.+.+.|+.+++|++.+++.+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~ 271 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVE 271 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEe
Confidence 46777788888899999999999999999987654
No 255
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=86.16 E-value=4 Score=24.64 Aligned_cols=71 Identities=11% Similarity=0.043 Sum_probs=43.8
Q ss_pred eEEEEEecCCCEEE-EEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCe-EEEecCCCcE
Q psy11100 17 VNCLAWHQNQGWIA-VGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEK-LTSSDETGLI 94 (110)
Q Consensus 17 v~~~~~~p~~~~l~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-l~s~~~~~~i 94 (110)
+..++++|++..+. +-...+.|..++..... ........-.....+++.+++.. +++-...+.|
T Consensus 38 ~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~--------------~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I 103 (267)
T 1npe_A 38 IIGLAFDCVDKVVYWTDISEPSIGRASLHGGE--------------PTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRI 103 (267)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEESSSCC--------------CEEEECTTCCCEEEEEEETTTTEEEEEETTTTEE
T ss_pred EEEEEEecCCCEEEEEECCCCEEEEEecCCCC--------------cEEEEECCCCCccEEEEEecCCeEEEEECCCCEE
Confidence 45788898765544 44446788888886543 11112222245678889887554 4455556788
Q ss_pred EEEeCCC
Q psy11100 95 IVWMLYK 101 (110)
Q Consensus 95 ~~w~~~~ 101 (110)
.++++..
T Consensus 104 ~~~~~~g 110 (267)
T 1npe_A 104 EVAKMDG 110 (267)
T ss_dssp EEEETTS
T ss_pred EEEEcCC
Confidence 8888753
No 256
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=86.04 E-value=4.4 Score=25.02 Aligned_cols=33 Identities=18% Similarity=0.341 Sum_probs=23.2
Q ss_pred CCceEEEEEecCCCEEEEEecCC--cEEEEEcCCCC
Q psy11100 14 NTKVNCLAWHQNQGWIAVGGDDG--LLKVLKLDTGK 47 (110)
Q Consensus 14 ~~~v~~~~~~p~~~~l~~~~~~~--~v~~~~~~~~~ 47 (110)
.+...-+.|++ +.+..+.+..| .|+.+|+.++.
T Consensus 20 ~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgk 54 (243)
T 3mbr_X 20 TAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGR 54 (243)
T ss_dssp TCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCC
T ss_pred ccccccEEEEC-CEEEEECCCCCCceEEEEECCCCC
Confidence 34566788886 56555655543 79999998875
No 257
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=85.91 E-value=4.8 Score=28.09 Aligned_cols=74 Identities=9% Similarity=-0.025 Sum_probs=44.7
Q ss_pred EEEEecCCCEEEEEec-CCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEec-CC-----
Q psy11100 19 CLAWHQNQGWIAVGGD-DGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSD-ET----- 91 (110)
Q Consensus 19 ~~~~~p~~~~l~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-~~----- 91 (110)
..++.+++..++.|+. +..+.+||..... +........... -..++.-+++.+++.++ .+
T Consensus 247 ~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~------------W~~~~~~~~~R~-~~s~~~~~dg~iyv~GG~~~~~~~~ 313 (656)
T 1k3i_A 247 GISMDGNGQIVVTGGNDAKKTSLYDSSSDS------------WIPGPDMQVARG-YQSSATMSDGRVFTIGGSWSGGVFE 313 (656)
T ss_dssp EEEECTTSCEEEECSSSTTCEEEEEGGGTE------------EEECCCCSSCCS-SCEEEECTTSCEEEECCCCCSSSCC
T ss_pred cccCCCCCCEEEeCCCCCCceEEecCcCCc------------eeECCCCCcccc-ccceEEecCCeEEEEeCcccCCccc
Confidence 4566778888888874 4578888887543 111111111111 12344556888888777 33
Q ss_pred CcEEEEeCCCCCCh
Q psy11100 92 GLIIVWMLYKCNDD 105 (110)
Q Consensus 92 ~~i~~w~~~~~~~~ 105 (110)
..+.+||+.++.+.
T Consensus 314 ~~~e~yd~~t~~W~ 327 (656)
T 1k3i_A 314 KNGEVYSPSSKTWT 327 (656)
T ss_dssp CCEEEEETTTTEEE
T ss_pred ccceEeCCCCCcce
Confidence 56899999887653
No 258
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=84.03 E-value=6.1 Score=25.03 Aligned_cols=22 Identities=32% Similarity=0.509 Sum_probs=16.4
Q ss_pred CCEEEEEecCCcEEEEEcCCCC
Q psy11100 26 QGWIAVGGDDGLLKVLKLDTGK 47 (110)
Q Consensus 26 ~~~l~~~~~~~~v~~~~~~~~~ 47 (110)
+..+..++.++.|..+|..++.
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~ 74 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGK 74 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCC
T ss_pred CCEEEEEcCCCeEEEEEccCCc
Confidence 4456677778889989987765
No 259
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=83.34 E-value=7.8 Score=25.71 Aligned_cols=69 Identities=13% Similarity=0.107 Sum_probs=40.3
Q ss_pred EEEEEec-CCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEE-ee-ccCCCeEEEEEcCCCCe-EEEecCCCc
Q psy11100 18 NCLAWHQ-NQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQS-LQ-GHSGKVRAIIWNEQYEK-LTSSDETGL 93 (110)
Q Consensus 18 ~~~~~~p-~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~v~~~~~s~~~~~-l~s~~~~~~ 93 (110)
..++++| +|.+.++-..++.|+.++...+. .... .. .....-..++|+|++.. +++-...+.
T Consensus 231 ~giavd~~~G~lyv~d~~~~~V~~~d~~~g~--------------~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~ 296 (433)
T 4hw6_A 231 KTCAVHPQNGKIYYTRYHHAMISSYDPATGT--------------LTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHC 296 (433)
T ss_dssp CCCEECTTTCCEEECBTTCSEEEEECTTTCC--------------EEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTE
T ss_pred CEEEEeCCCCeEEEEECCCCEEEEEECCCCe--------------EEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCE
Confidence 3466777 56655444445667777665443 1011 11 11222346999999984 555556788
Q ss_pred EEEEeCC
Q psy11100 94 IIVWMLY 100 (110)
Q Consensus 94 i~~w~~~ 100 (110)
|..+++.
T Consensus 297 I~~~~~d 303 (433)
T 4hw6_A 297 IYRVDYN 303 (433)
T ss_dssp EEEEEBC
T ss_pred EEEEeCC
Confidence 9887765
No 260
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=83.28 E-value=1.7 Score=30.12 Aligned_cols=28 Identities=4% Similarity=-0.052 Sum_probs=22.3
Q ss_pred CCCeEEEecCCCcEEEEeCCCCCChhhh
Q psy11100 81 QYEKLTSSDETGLIIVWMLYKCNDDDEW 108 (110)
Q Consensus 81 ~~~~l~s~~~~~~i~~w~~~~~~~~~~~ 108 (110)
.+..+..++.|+.|+.+|.++|+.+.++
T Consensus 496 agglvf~g~~dg~l~A~D~~tG~~lW~~ 523 (582)
T 1flg_A 496 AGNLVFTGTGDGYFKAFDAKSGKELWKF 523 (582)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCCEEEEECCCCcEEEEECCCCCEEEEe
Confidence 3566666888999999999999876554
No 261
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=82.68 E-value=10 Score=26.65 Aligned_cols=75 Identities=17% Similarity=0.183 Sum_probs=45.8
Q ss_pred EEEEecCCCEEEEEecCC-------------------cEEEEEcCCCCCcCCcccccccceeeeEEeeccC-------CC
Q psy11100 19 CLAWHQNQGWIAVGGDDG-------------------LLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHS-------GK 72 (110)
Q Consensus 19 ~~~~~p~~~~l~~~~~~~-------------------~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 72 (110)
..++.|++..+..+..++ .|..+|..++.. ........|. ..
T Consensus 234 ~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~------------~W~~~~~~~~~wd~~~~~~ 301 (668)
T 1kv9_A 234 SMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKL------------AWHYQVTPGDSWDFTATQQ 301 (668)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCE------------EEEEESSTTCCSCCCCCSC
T ss_pred ceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCce------------eeEeecCCCccccccCCCC
Confidence 367888777777766554 377788877750 0111111121 22
Q ss_pred eEEEEEcCCCC---eEEEecCCCcEEEEeCCCCCCh
Q psy11100 73 VRAIIWNEQYE---KLTSSDETGLIIVWMLYKCNDD 105 (110)
Q Consensus 73 v~~~~~s~~~~---~l~s~~~~~~i~~w~~~~~~~~ 105 (110)
.....+..+|. .++.++.+|.+.++|..+|+.+
T Consensus 302 ~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l 337 (668)
T 1kv9_A 302 ITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLI 337 (668)
T ss_dssp EEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred cEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEe
Confidence 22233334665 4778889999999999998865
No 262
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=80.93 E-value=7 Score=23.52 Aligned_cols=72 Identities=7% Similarity=-0.031 Sum_probs=42.7
Q ss_pred CceEEEEEecCCCEEEEEec---CCcEEEEEcCCCCCcCCcccccccceeeeEEee-ccCCCeEEEEEcCCCCe-EEEec
Q psy11100 15 TKVNCLAWHQNQGWIAVGGD---DGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQ-GHSGKVRAIIWNEQYEK-LTSSD 89 (110)
Q Consensus 15 ~~v~~~~~~p~~~~l~~~~~---~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~-l~s~~ 89 (110)
.....++++|++..+..+.. .+.|..++..... ...+. ..-.....+++++++.. +++-.
T Consensus 122 ~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~---------------~~~~~~~~~~~P~gia~d~~~~~lyv~d~ 186 (267)
T 1npe_A 122 VNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN---------------RRILAQDNLGLPNGLTFDAFSSQLCWVDA 186 (267)
T ss_dssp SSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC---------------CEEEECTTCSCEEEEEEETTTTEEEEEET
T ss_pred CCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC---------------cEEEEECCCCCCcEEEEcCCCCEEEEEEC
Confidence 45677889996554444333 3567677665432 11111 22245678899987665 44555
Q ss_pred CCCcEEEEeCCC
Q psy11100 90 ETGLIIVWMLYK 101 (110)
Q Consensus 90 ~~~~i~~w~~~~ 101 (110)
..+.|.++++..
T Consensus 187 ~~~~I~~~~~~g 198 (267)
T 1npe_A 187 GTHRAECLNPAQ 198 (267)
T ss_dssp TTTEEEEEETTE
T ss_pred CCCEEEEEecCC
Confidence 567888888764
No 263
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=80.88 E-value=9.2 Score=24.84 Aligned_cols=74 Identities=11% Similarity=0.023 Sum_probs=47.7
Q ss_pred ceEEEEEecCCCEEEEEecC-CcEEEEEcCCCCCcCCcccccccceeeeE-Ee--eccCCCeEEEEEcCCCCeEEEecCC
Q psy11100 16 KVNCLAWHQNQGWIAVGGDD-GLLKVLKLDTGKESTGQVAAANVNLAMNQ-SL--QGHSGKVRAIIWNEQYEKLTSSDET 91 (110)
Q Consensus 16 ~v~~~~~~p~~~~l~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~v~~~~~s~~~~~l~s~~~~ 91 (110)
....++..++|+.-++++.. +.|...+..... ..... .. .......+.++++|+|..|+.....
T Consensus 138 ~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~------------~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~ 205 (334)
T 2p9w_A 138 GVVQSAQDRDGNSYVAFALGMPAIARVSADGKT------------VSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGP 205 (334)
T ss_dssp EEEEEEECTTSCEEEEEEESSCEEEEECTTSCC------------EEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSS
T ss_pred CCceeEECCCCCEEEeCCCCCCeEEEEeCCCCE------------EeeeeecCCCcccccCcceEEEeCCCCEEEEEcCC
Confidence 47789999999987777766 665544444322 00000 00 1112235689999999987777669
Q ss_pred CcEEEEeCCC
Q psy11100 92 GLIIVWMLYK 101 (110)
Q Consensus 92 ~~i~~w~~~~ 101 (110)
+.|..+|+.+
T Consensus 206 g~L~~fD~~~ 215 (334)
T 2p9w_A 206 RALTAFDVSK 215 (334)
T ss_dssp SSEEEEECSS
T ss_pred CeEEEEcCCC
Confidence 9999999774
No 264
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=80.69 E-value=5.8 Score=29.34 Aligned_cols=31 Identities=23% Similarity=0.202 Sum_probs=27.0
Q ss_pred ceEEEEEecCCCEEEEEecCCcEEEEEcCCC
Q psy11100 16 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTG 46 (110)
Q Consensus 16 ~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~ 46 (110)
.+.++...++..++.+-+.|+.+|+|++.++
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~ 267 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTN 267 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTT
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCC
Confidence 5677778888889999999999999998875
No 265
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=79.59 E-value=14 Score=26.27 Aligned_cols=72 Identities=11% Similarity=0.173 Sum_probs=47.6
Q ss_pred CceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEee-----ccCCCeEEEEEcCCCCeEEEec
Q psy11100 15 TKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQ-----GHSGKVRAIIWNEQYEKLTSSD 89 (110)
Q Consensus 15 ~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~~~~~s~~~~~l~s~~ 89 (110)
..|.++...++|..|..|..++-+..++..... ...+. .....|.++...++|.+++...
T Consensus 406 ~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~---------------~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~ 470 (795)
T 4a2l_A 406 NNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQ---------------VENFNQRNSQLVNENVYAILPDGEGNLWLGTL 470 (795)
T ss_dssp SCEEEEEEETTTTEEEEEETTTEEEEEETTTCC---------------EEEECTTTSCCSCSCEEEEEECSSSCEEEEES
T ss_pred ccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCc---------------EEEeecCCCCcCCCeeEEEEECCCCCEEEEec
Confidence 568888888888855566666678888877654 11111 1235688888888888766554
Q ss_pred CCCcEEEEeCCCCC
Q psy11100 90 ETGLIIVWMLYKCN 103 (110)
Q Consensus 90 ~~~~i~~w~~~~~~ 103 (110)
+-|..+|..+++
T Consensus 471 --~Gl~~~~~~~~~ 482 (795)
T 4a2l_A 471 --SALVRFNPEQRS 482 (795)
T ss_dssp --SCEEEEETTTTE
T ss_pred --CceeEEeCCCCe
Confidence 347777876653
No 266
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=79.08 E-value=7.1 Score=23.96 Aligned_cols=61 Identities=13% Similarity=0.076 Sum_probs=32.8
Q ss_pred CCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecCCCcEEEEeCCCCC
Q psy11100 26 QGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYKCN 103 (110)
Q Consensus 26 ~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~~~i~~w~~~~~~ 103 (110)
+..+..+..++.+..+|.. +. ...........+..+...+++.+++ ++.++.|..+|.. +.
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~--------------~~~~~~~~~~~~~~~~~~~~g~l~v-gt~~~~l~~~d~~-g~ 167 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GT--------------EKWRFKTKKAIYATPIVSEDGTIYV-GSNDNYLYAINPD-GT 167 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SC--------------EEEEEECSSCCCSCCEECTTSCEEE-ECTTSEEEEECTT-SC
T ss_pred CCEEEEEecCCEEEEEcCC-CC--------------EEEEEcCCCceeeeeEEcCCCEEEE-EcCCCEEEEECCC-CC
Confidence 3345566667777777766 43 1222222233344455555666443 4456777777776 44
No 267
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=79.02 E-value=0.99 Score=33.80 Aligned_cols=35 Identities=14% Similarity=0.063 Sum_probs=28.1
Q ss_pred CeEEEEEcCCCCeEEEecCCCcEEEEeCCCCCChh
Q psy11100 72 KVRAIIWNEQYEKLTSSDETGLIIVWMLYKCNDDD 106 (110)
Q Consensus 72 ~v~~~~~s~~~~~l~s~~~~~~i~~w~~~~~~~~~ 106 (110)
.+.+++..++..++.+.+.|+.+++|++.+++.+.
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~ 273 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVE 273 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEE
Confidence 34455666778889999999999999999987654
No 268
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=78.67 E-value=13 Score=25.42 Aligned_cols=80 Identities=10% Similarity=-0.045 Sum_probs=43.1
Q ss_pred EEEEEecC-CCEEEEEecCCcEEEEEcC-------CCCCcCCcccccc-cceeeeEEeeccCCCeEEEEEcCCCCe-EEE
Q psy11100 18 NCLAWHQN-QGWIAVGGDDGLLKVLKLD-------TGKESTGQVAAAN-VNLAMNQSLQGHSGKVRAIIWNEQYEK-LTS 87 (110)
Q Consensus 18 ~~~~~~p~-~~~l~~~~~~~~v~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~s~~~~~-l~s 87 (110)
..++.+|+ +.+.++-..++.|..+|.. .+... .+..+.. .....+... ........++|+|+|.. +++
T Consensus 250 ~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~-tp~~~~~~g~~~~l~~~-~~~~~p~~ia~~p~G~~lYva 327 (496)
T 3kya_A 250 NGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSW-DPIVKNNPNTFKQLFTI-ADPSWEFQIFIHPTGKYAYFG 327 (496)
T ss_dssp CCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCC-CCBGGGCTTTEEEEEEC-SSSSCCEEEEECTTSSEEEEE
T ss_pred eEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceee-cccccccccccceeEec-CCCCCceEEEEcCCCCEEEEE
Confidence 45677884 5555566667778888876 33200 0000000 001111111 12344578999999995 555
Q ss_pred ecCCCcEEEEeC
Q psy11100 88 SDETGLIIVWML 99 (110)
Q Consensus 88 ~~~~~~i~~w~~ 99 (110)
-.....|+.+++
T Consensus 328 D~~~h~I~kid~ 339 (496)
T 3kya_A 328 VINNHYFMRSDY 339 (496)
T ss_dssp ETTTTEEEEEEE
T ss_pred eCCCCEEEEEec
Confidence 556778888654
No 269
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=76.17 E-value=14 Score=24.40 Aligned_cols=31 Identities=10% Similarity=-0.033 Sum_probs=21.8
Q ss_pred CeEEEEEcC-CCCeEEEecCCCcEEEEeCCCC
Q psy11100 72 KVRAIIWNE-QYEKLTSSDETGLIIVWMLYKC 102 (110)
Q Consensus 72 ~v~~~~~s~-~~~~l~s~~~~~~i~~w~~~~~ 102 (110)
....++++| ++.++++-..++.|..++...+
T Consensus 227 ~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~ 258 (430)
T 3tc9_A 227 NCNGAETHPINGELYFNSWNAGQVFRYDFTTQ 258 (430)
T ss_dssp SCCCEEECTTTCCEEEEETTTTEEEEEETTTT
T ss_pred CceEEEEeCCCCEEEEEECCCCEEEEEECCCC
Confidence 345677888 6776666666778888887654
No 270
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=75.44 E-value=15 Score=24.23 Aligned_cols=74 Identities=9% Similarity=0.052 Sum_probs=49.4
Q ss_pred eEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecCCCcEEE
Q psy11100 17 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIV 96 (110)
Q Consensus 17 v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~~~i~~ 96 (110)
..++..++.-..+..-.+-|.+.++|+.++. ++..-+-....|...+-+....-++.....|.+.-
T Consensus 262 PVamqvs~kygviyviTK~G~ihlyDleTgt--------------~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~ 327 (365)
T 2xzh_A 262 PVAMQISEKHDVVFLITKYGYIHLYDLETGT--------------CIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLS 327 (365)
T ss_dssp EEEEEEETTTTEEEEEETTSEEEEEETTTCC--------------EEEEEECCSSCEEEEEEEGGGTEEEEEETTCEEEE
T ss_pred eEEEEecccCCEEEEEeCCcEEEEEEcccCc--------------EEEEeccCCCceEEecccCCCCcEEEEcCCCEEEE
Confidence 3345556655556666778999999999987 55555555566655555555566777778887776
Q ss_pred EeCCCCCC
Q psy11100 97 WMLYKCND 104 (110)
Q Consensus 97 w~~~~~~~ 104 (110)
..+...+.
T Consensus 328 v~v~~~~i 335 (365)
T 2xzh_A 328 VCVEEENI 335 (365)
T ss_dssp EEECTTTH
T ss_pred EEECcccE
Confidence 66655544
No 271
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=74.75 E-value=3.2 Score=29.21 Aligned_cols=31 Identities=6% Similarity=-0.024 Sum_probs=24.2
Q ss_pred EcCCCCeEEEecCCCcEEEEeCCCCCChhhh
Q psy11100 78 WNEQYEKLTSSDETGLIIVWMLYKCNDDDEW 108 (110)
Q Consensus 78 ~s~~~~~l~s~~~~~~i~~w~~~~~~~~~~~ 108 (110)
+...+..+..++.++.|+.||.++|+.+.++
T Consensus 465 ~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~ 495 (668)
T 1kv9_A 465 LSTAGNLVFQGTAAGQMHAYSADKGEALWQF 495 (668)
T ss_dssp EEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred eEeCCCEEEEECCcccchhhhhhcChhheEe
Confidence 3446777777889999999999999876543
No 272
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=73.52 E-value=8.4 Score=26.91 Aligned_cols=28 Identities=4% Similarity=-0.217 Sum_probs=22.0
Q ss_pred CCCeEEEecCCCcEEEEeCCCCCChhhh
Q psy11100 81 QYEKLTSSDETGLIIVWMLYKCNDDDEW 108 (110)
Q Consensus 81 ~~~~l~s~~~~~~i~~w~~~~~~~~~~~ 108 (110)
.+..+..++.|+.|+.+|.++|+.+.+.
T Consensus 483 agg~vf~gt~dg~l~A~D~~tG~~lW~~ 510 (599)
T 1w6s_A 483 AGDLVFYGTLDGYLKARDSDTGDLLWKF 510 (599)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred cCCEEEEECCCCeEEEEECCCCCEEEEe
Confidence 4556666888999999999999876543
No 273
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=72.09 E-value=15 Score=22.73 Aligned_cols=76 Identities=11% Similarity=0.142 Sum_probs=49.7
Q ss_pred CCCCceEEEEEecCCCE-EEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeec-cCCCeEEEEEcCCCCeEEEec
Q psy11100 12 PNNTKVNCLAWHQNQGW-IAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQG-HSGKVRAIIWNEQYEKLTSSD 89 (110)
Q Consensus 12 ~h~~~v~~~~~~p~~~~-l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~s~~ 89 (110)
+-...+..++++|++.. .+....++.|...|.. +. ....+.- -..-.-.+++.+++.++++..
T Consensus 24 g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~--------------v~~~i~l~g~~D~EGIa~~~~g~~~vs~E 88 (255)
T 3qqz_A 24 GITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GD--------------LIRTIPLDFVKDLETIEYIGDNQFVISDE 88 (255)
T ss_dssp TCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CC--------------EEEEEECSSCSSEEEEEECSTTEEEEEET
T ss_pred CcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CC--------------EEEEEecCCCCChHHeEEeCCCEEEEEEC
Confidence 33457999999998654 4556777788888887 44 2333321 113456778888887766766
Q ss_pred CCCcEEEEeCCCC
Q psy11100 90 ETGLIIVWMLYKC 102 (110)
Q Consensus 90 ~~~~i~~w~~~~~ 102 (110)
.++.+.++++...
T Consensus 89 ~~~~l~~~~v~~~ 101 (255)
T 3qqz_A 89 RDYAIYVISLTPN 101 (255)
T ss_dssp TTTEEEEEEECTT
T ss_pred CCCcEEEEEcCCC
Confidence 6777877776543
No 274
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=72.04 E-value=4.5 Score=29.16 Aligned_cols=33 Identities=9% Similarity=0.117 Sum_probs=26.0
Q ss_pred CeEEEEEcCCCCeEEEecCCCcEEEEeCCCCCChh
Q psy11100 72 KVRAIIWNEQYEKLTSSDETGLIIVWMLYKCNDDD 106 (110)
Q Consensus 72 ~v~~~~~s~~~~~l~s~~~~~~i~~w~~~~~~~~~ 106 (110)
.|.++.+ +..++++.+.|..+++|++++++.+.
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~ 255 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQ 255 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEE
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEE
Confidence 4555544 57789999999999999999987543
No 275
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=71.38 E-value=15 Score=22.65 Aligned_cols=84 Identities=13% Similarity=0.173 Sum_probs=45.9
Q ss_pred eccCCCCCceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeE-Ee--eccCCCeEEEEEcCCCCe
Q psy11100 8 KIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQ-SL--QGHSGKVRAIIWNEQYEK 84 (110)
Q Consensus 8 ~~~~~h~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~v~~~~~s~~~~~ 84 (110)
++..+.......+++.+++.++++.-.++.+.++++.... .... ..... .+ .......-.++|+|.+..
T Consensus 63 ~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~----~i~~----~~~~~~~~~~~~~N~g~EGLA~d~~~~~ 134 (255)
T 3qqz_A 63 TIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNS----EVKI----LKKIKIPLQESPTNCGFEGLAYSRQDHT 134 (255)
T ss_dssp EEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTC----CEEE----EEEEECCCSSCCCSSCCEEEEEETTTTE
T ss_pred EEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCC----eeee----eeeeccccccccccCCcceEEEeCCCCE
Confidence 3333333556677888888776666566778888776543 0000 00000 00 112344678999999876
Q ss_pred EEEecCCCcEEEEeC
Q psy11100 85 LTSSDETGLIIVWML 99 (110)
Q Consensus 85 l~s~~~~~~i~~w~~ 99 (110)
|..+.......+|.+
T Consensus 135 L~va~E~~p~~i~~~ 149 (255)
T 3qqz_A 135 FWFFKEKNPIEVYKV 149 (255)
T ss_dssp EEEEEESSSEEEEEE
T ss_pred EEEEECcCCceEEEE
Confidence 555554434444443
No 276
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=71.33 E-value=5.9 Score=29.82 Aligned_cols=31 Identities=23% Similarity=0.202 Sum_probs=25.6
Q ss_pred ceEEEEEecCCCEEEEEecCCcEEEEEcCCC
Q psy11100 16 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTG 46 (110)
Q Consensus 16 ~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~ 46 (110)
.+.+++..++..++.+-+.|+.+|+|++.++
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~ 269 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTN 269 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTT
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCC
Confidence 4455666778889999999999999998765
No 277
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=70.43 E-value=19 Score=23.40 Aligned_cols=31 Identities=10% Similarity=-0.130 Sum_probs=23.4
Q ss_pred CCeEEEEEcCCCCeEE-EecCCCcEEEEeCCC
Q psy11100 71 GKVRAIIWNEQYEKLT-SSDETGLIIVWMLYK 101 (110)
Q Consensus 71 ~~v~~~~~s~~~~~l~-s~~~~~~i~~w~~~~ 101 (110)
...+.++|||+++.+. +-+..+.|..|++..
T Consensus 221 ~~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 221 DFANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred cccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 4568899999998754 444577899888763
No 278
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=70.30 E-value=18 Score=22.89 Aligned_cols=61 Identities=16% Similarity=0.169 Sum_probs=37.0
Q ss_pred CEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecCCCcEEEEeCCCCCCh
Q psy11100 27 GWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYKCNDD 105 (110)
Q Consensus 27 ~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~~~i~~w~~~~~~~~ 105 (110)
..+..++.++.+..+|...+. ..-.. .......+.. ++..+..++.++.|..+|..+|+..
T Consensus 240 ~~v~~~~~~g~l~~~d~~tG~--------------~~w~~--~~~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~ 300 (376)
T 3q7m_A 240 GVVFALAYNGNLTALDLRSGQ--------------IMWKR--ELGSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTL 300 (376)
T ss_dssp TEEEEECTTSCEEEEETTTCC--------------EEEEE--CCCCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEE
T ss_pred CEEEEEecCcEEEEEECCCCc--------------EEeec--cCCCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEE
Confidence 445566667888888887765 11111 1222333333 3555666667888999998888754
No 279
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=68.69 E-value=29 Score=24.71 Aligned_cols=79 Identities=4% Similarity=-0.049 Sum_probs=48.0
Q ss_pred EEEEecCCCEEEEE-ecCCcEEEEEcCCCCCc--CCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecCCCcEE
Q psy11100 19 CLAWHQNQGWIAVG-GDDGLLKVLKLDTGKES--TGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLII 95 (110)
Q Consensus 19 ~~~~~p~~~~l~~~-~~~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~~~i~ 95 (110)
.+..+|||++++.+ ..+..+.++++....+- .+..++ .. .+.....-.......+|.++|....+.-.|+.|-
T Consensus 327 Gv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~--~~--~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvv 402 (638)
T 3sbq_A 327 GCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADP--RD--VIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVV 402 (638)
T ss_dssp CEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCG--GG--GEEECCBCCSCEEEEEECSSSEEEEEETTTTEEE
T ss_pred ceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCc--cc--ceEeeccCCCcccEEEECCCCceEeeeeecceEE
Confidence 46779999986554 45778999998853210 000000 00 0111111234567889999995566666899999
Q ss_pred EEeCCC
Q psy11100 96 VWMLYK 101 (110)
Q Consensus 96 ~w~~~~ 101 (110)
-|++.+
T Consensus 403 kWni~~ 408 (638)
T 3sbq_A 403 KWNMEE 408 (638)
T ss_dssp EEEHHH
T ss_pred EEeccH
Confidence 999754
No 280
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=68.48 E-value=26 Score=24.11 Aligned_cols=75 Identities=9% Similarity=0.035 Sum_probs=51.9
Q ss_pred eEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecCCCcEEE
Q psy11100 17 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLIIV 96 (110)
Q Consensus 17 v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~~~i~~ 96 (110)
..++..++.-..+..-.+-|.+.++|+.++. +++.-+-....|...+-+....-++.....|.|.-
T Consensus 261 Pvamqvs~kygviyviTK~G~i~lyDleTgt--------------~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~ 326 (494)
T 1bpo_A 261 PVAMQISEKHDVVFLITKYGYIHLYDLETGT--------------CIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLS 326 (494)
T ss_dssp EEEEEEETTTTEEEEEETTSEEEEEETTTCC--------------EEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEE
T ss_pred eeEEEecccCCEEEEEecCceEEEEecccce--------------eeeeecccCCceEEecccCCCCcEEEEccCceEEE
Confidence 4456667766666677788999999999987 55555555566655555566666777788888776
Q ss_pred EeCCCCCCh
Q psy11100 97 WMLYKCNDD 105 (110)
Q Consensus 97 w~~~~~~~~ 105 (110)
..+.....+
T Consensus 327 v~v~e~~iv 335 (494)
T 1bpo_A 327 VCVEEENII 335 (494)
T ss_dssp EEECTTTHH
T ss_pred EEEccccch
Confidence 666655443
No 281
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=66.64 E-value=22 Score=22.69 Aligned_cols=72 Identities=8% Similarity=0.116 Sum_probs=41.3
Q ss_pred CceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEe---eccCCCeEEEEEcCC----CCeEEE
Q psy11100 15 TKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSL---QGHSGKVRAIIWNEQ----YEKLTS 87 (110)
Q Consensus 15 ~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~s~~----~~~l~s 87 (110)
.....++|.|+|+++++ ...+.|.+++ ... . .....+ .........++++|+ +.+.++
T Consensus 31 ~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~----~--------~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~ 95 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIA-ERPGRIRLFR--EGR----L--------STYAELSVYHRGESGLLGLALHPRFPQEPYVYAY 95 (352)
T ss_dssp SCEEEEEECTTSCEEEE-ETTTEEEEEE--TTE----E--------EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEE
T ss_pred CCceEEEEcCCCeEEEE-eCCCeEEEEE--CCC----c--------cEeecceEeecCCCCceeEEECCCCCCCCEEEEE
Confidence 45678999999996555 5568888887 222 0 011111 112345788999997 444443
Q ss_pred ecCC-----CcEEEEeCCC
Q psy11100 88 SDET-----GLIIVWMLYK 101 (110)
Q Consensus 88 ~~~~-----~~i~~w~~~~ 101 (110)
-... ..|..++...
T Consensus 96 ~~~~~~~~~~~v~r~~~~~ 114 (352)
T 2ism_A 96 RTVAEGGLRNQVVRLRHLG 114 (352)
T ss_dssp EEECTTSSEEEEEEEEECS
T ss_pred EecCCCCCccEEEEEEeCC
Confidence 3322 4566666553
No 282
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=66.15 E-value=19 Score=26.12 Aligned_cols=30 Identities=17% Similarity=0.263 Sum_probs=23.3
Q ss_pred ceEEEEEecCCCEEEEEecCCcEEEEEcCCCC
Q psy11100 16 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGK 47 (110)
Q Consensus 16 ~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~ 47 (110)
.|.++. .+..++++-+.|..+|+|++.++.
T Consensus 223 ~Is~~~--~~~~fLftL~~Dh~LRiWsL~t~~ 252 (729)
T 3f7f_A 223 VISCKL--FHERYLIVLTQNCHLKIWDLTSFT 252 (729)
T ss_dssp EEEEEE--ETTTEEEEEETTCEEEEEETTTTE
T ss_pred eEEEec--cCCcEEEEEEcCCeEEEEEcCCCc
Confidence 455443 357799999999999999998763
No 283
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=65.88 E-value=23 Score=22.63 Aligned_cols=28 Identities=14% Similarity=0.117 Sum_probs=21.0
Q ss_pred CceEEEEEecCCC-EEEEEecCCcEEEEEc
Q psy11100 15 TKVNCLAWHQNQG-WIAVGGDDGLLKVLKL 43 (110)
Q Consensus 15 ~~v~~~~~~p~~~-~l~~~~~~~~v~~~~~ 43 (110)
.....++|.|+|+ ++++ ...+.|++++.
T Consensus 18 ~~P~~i~~~pdG~~l~V~-e~~G~i~~~~~ 46 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLIT-LRGGELRHWQA 46 (353)
T ss_dssp SSEEEEEECSTTCCEEEE-ETTTEEEEEET
T ss_pred CCcEEEEEcCCCCEEEEE-eCCceEEEEeC
Confidence 3467899999998 6655 45788888874
No 284
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=64.32 E-value=36 Score=24.25 Aligned_cols=72 Identities=17% Similarity=0.218 Sum_probs=45.8
Q ss_pred CceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEee---------ccCCCeEEEEEcCCCC-e
Q psy11100 15 TKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQ---------GHSGKVRAIIWNEQYE-K 84 (110)
Q Consensus 15 ~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~v~~~~~s~~~~-~ 84 (110)
..|.++...++|.+ ..|..++-+..++..... ...+. -....|.++...+++. +
T Consensus 357 ~~V~~i~~d~~g~l-WiGt~~~Gl~~~~~~~~~---------------~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~l 420 (795)
T 4a2l_A 357 NVVSCIVEDKDKNL-WIGTNDGGLNLYNPITQR---------------FTSYTLQEDESARGIGSNNIKAVYVDEKKSLV 420 (795)
T ss_dssp SSEEEEEECTTSCE-EEEESSSCEEEECTTTCC---------------EEEECCC------CCSCSCEEEEEEETTTTEE
T ss_pred CeeEEEEECCCCCE-EEEECCCCeEEEcCCCCc---------------EEEEecCCCCcccCCCCccEEEEEEcCCCCEE
Confidence 45888888887774 445666668888876543 11111 1235688888888888 5
Q ss_pred EEEecCCCcEEEEeCCCCC
Q psy11100 85 LTSSDETGLIIVWMLYKCN 103 (110)
Q Consensus 85 l~s~~~~~~i~~w~~~~~~ 103 (110)
.+ ++.++-|..+|..+++
T Consensus 421 Wi-gt~~~Gl~~~d~~~~~ 438 (795)
T 4a2l_A 421 YI-GTHAGGLSILHRNSGQ 438 (795)
T ss_dssp EE-EETTTEEEEEETTTCC
T ss_pred EE-EeCcCceeEEeCCCCc
Confidence 44 4444557888877654
No 285
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=62.85 E-value=29 Score=22.58 Aligned_cols=78 Identities=9% Similarity=0.079 Sum_probs=48.4
Q ss_pred CceEEEEEecC-CCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeec------cCCCeEEEEE---cCCCCe
Q psy11100 15 TKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQG------HSGKVRAIIW---NEQYEK 84 (110)
Q Consensus 15 ~~v~~~~~~p~-~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~v~~~~~---s~~~~~ 84 (110)
....++.|++. +.+.++....+.|..|+...... ....+.. ....+..+.| .|++.+
T Consensus 13 ~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~-------------~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL 79 (334)
T 2p9w_A 13 LTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSH-------------FNVVIDGASSNGDGEQQMSGLSLLTHDNSKRL 79 (334)
T ss_dssp CCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCE-------------EEECCTTTCCSSCCSEEEEEEEESSSSSCCEE
T ss_pred cCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeE-------------EEEecCCccccCCCcceeeEEEEeccCCCCcE
Confidence 44567899885 44455555689999998875430 0111211 0123578999 688777
Q ss_pred EEEec-------------CCCcEEEEeCC---CCCCh
Q psy11100 85 LTSSD-------------ETGLIIVWMLY---KCNDD 105 (110)
Q Consensus 85 l~s~~-------------~~~~i~~w~~~---~~~~~ 105 (110)
++... .+..|..+|+. +++.+
T Consensus 80 ~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~ 116 (334)
T 2p9w_A 80 FAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPV 116 (334)
T ss_dssp EEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCS
T ss_pred EEEEcccccccccccccCCCCEEEEEcCCcCCCCCEE
Confidence 76543 25678899988 66553
No 286
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=59.50 E-value=32 Score=22.06 Aligned_cols=27 Identities=11% Similarity=0.067 Sum_probs=20.1
Q ss_pred CceEEEEEecCCCEEEEEecCCcEEEEE
Q psy11100 15 TKVNCLAWHQNQGWIAVGGDDGLLKVLK 42 (110)
Q Consensus 15 ~~v~~~~~~p~~~~l~~~~~~~~v~~~~ 42 (110)
.....++|.|+|+++++ ..++.|.+++
T Consensus 29 ~~P~~ia~~pdG~l~V~-e~~g~I~~~d 55 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVT-ERPGRLVLIS 55 (354)
T ss_dssp SCEEEEEEEETTEEEEE-ETTTEEEEEC
T ss_pred CCCeEEEEcCCCeEEEE-eCCCEEEEEe
Confidence 45678999999985555 5568888775
No 287
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=58.52 E-value=34 Score=22.11 Aligned_cols=76 Identities=11% Similarity=-0.075 Sum_probs=42.1
Q ss_pred ceEEEEEecCCCEEEEE-ecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecCCCcE
Q psy11100 16 KVNCLAWHQNQGWIAVG-GDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLI 94 (110)
Q Consensus 16 ~v~~~~~~p~~~~l~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~~~i 94 (110)
....++++|++..|..+ ...+.|..++..... ........-.....+++ ..+.++.+-...+.|
T Consensus 247 ~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~--------------~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V 311 (386)
T 3v65_B 247 WPNGLTIDYAGRRMYWVDAKHHVIERANLDGSH--------------RKAVISQGLPHPFAITV-FEDSLYWTDWHTKSI 311 (386)
T ss_dssp CEEEEEEEGGGTEEEEEETTTTEEEEECTTSCS--------------CEEEECSSCSSEEEEEE-ETTEEEEEETTTTEE
T ss_pred CeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCe--------------eEEEEECCCCCceEEEE-ECCEEEEeeCCCCeE
Confidence 45678888765554444 344567777765432 11112222234556666 344556666667778
Q ss_pred EEEeCCCCCChh
Q psy11100 95 IVWMLYKCNDDD 106 (110)
Q Consensus 95 ~~w~~~~~~~~~ 106 (110)
..++..+|....
T Consensus 312 ~~~~~~~G~~~~ 323 (386)
T 3v65_B 312 NSANKFTGKNQE 323 (386)
T ss_dssp EEEETTTCCSCE
T ss_pred EEEECCCCcceE
Confidence 777765655443
No 288
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=57.16 E-value=39 Score=22.36 Aligned_cols=58 Identities=5% Similarity=0.028 Sum_probs=36.4
Q ss_pred ceEEEEEecC--CCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEe
Q psy11100 16 KVNCLAWHQN--QGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSS 88 (110)
Q Consensus 16 ~v~~~~~~p~--~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 88 (110)
....++++|+ +..|..+...+.|+.++...+. ...+.........++++++|.++++-
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~---------------v~~~~~~~~~P~giavd~dG~lyVad 199 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQY---------------VDIKTTNIGQCADVNFTLNGDMVVVD 199 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTE---------------EEEECCCCSCEEEEEECTTCCEEEEE
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCE---------------EEEeecCCCCccEEEECCCCCEEEEc
Confidence 4567889984 3334444444778888876553 23333344567889999998854444
No 289
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=55.46 E-value=44 Score=22.38 Aligned_cols=31 Identities=13% Similarity=0.187 Sum_probs=22.1
Q ss_pred CCceEEEEEecCCCEEEEEecCCcEEEEEcC
Q psy11100 14 NTKVNCLAWHQNQGWIAVGGDDGLLKVLKLD 44 (110)
Q Consensus 14 ~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~ 44 (110)
-.....++|.|+|+++++-...+.|.+++..
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~ 56 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPE 56 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTT
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECC
Confidence 3456789999999977775544567776654
No 290
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=52.40 E-value=60 Score=23.07 Aligned_cols=71 Identities=14% Similarity=0.066 Sum_probs=41.9
Q ss_pred CceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeec-----cCCCeEEEEEcCCCCeEEEec
Q psy11100 15 TKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQG-----HSGKVRAIIWNEQYEKLTSSD 89 (110)
Q Consensus 15 ~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~v~~~~~s~~~~~l~s~~ 89 (110)
..|.++...++|.+.+ |.. +-+..++..... ....... ....|.++...++|.+.+...
T Consensus 450 ~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~--------------~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~ 513 (781)
T 3v9f_A 450 LDVRVFYEDKNKKIWI-GTH-AGVFVIDLASKK--------------VIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTF 513 (781)
T ss_dssp CCEEEEEECTTSEEEE-EET-TEEEEEESSSSS--------------CCEEECTTTSSCSCSCEEEEEECTTCCEEEEES
T ss_pred CeEEEEEECCCCCEEE-EEC-CceEEEeCCCCe--------------EEecccCcccccccceeEEEEEcCCCCEEEEEc
Confidence 5688887777776444 333 457778876543 0010111 135688888888888766554
Q ss_pred CCCcEEEEeCCCC
Q psy11100 90 ETGLIIVWMLYKC 102 (110)
Q Consensus 90 ~~~~i~~w~~~~~ 102 (110)
..| |..+|..++
T Consensus 514 ~~G-l~~~~~~~~ 525 (781)
T 3v9f_A 514 GGG-VGIYTPDMQ 525 (781)
T ss_dssp SSC-EEEECTTCC
T ss_pred CCC-EEEEeCCCC
Confidence 344 556776544
No 291
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=51.58 E-value=42 Score=21.03 Aligned_cols=70 Identities=10% Similarity=0.034 Sum_probs=37.2
Q ss_pred CCCCceEEEEEecCCCEEEEEecCCcEEE-EEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecC
Q psy11100 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKV-LKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDE 90 (110)
Q Consensus 12 ~h~~~v~~~~~~p~~~~l~~~~~~~~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 90 (110)
+....+..+.+.|++.+++.+.. +.+.. .|.. +. .+... -......+..+.+.+++..++.+ .
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~g~~-G~~~~S~d~g-G~-----------tW~~~--~~~~~~~~~~~~~~~~g~~~~~~-~ 223 (327)
T 2xbg_A 160 EAIGVMRNLNRSPSGEYVAVSSR-GSFYSTWEPG-QT-----------AWEPH--NRTTSRRLHNMGFTPDGRLWMIV-N 223 (327)
T ss_dssp SCCCCEEEEEECTTSCEEEEETT-SSEEEEECTT-CS-----------SCEEE--ECCSSSCEEEEEECTTSCEEEEE-T
T ss_pred CCCcceEEEEEcCCCcEEEEECC-CcEEEEeCCC-CC-----------ceeEC--CCCCCCccceeEECCCCCEEEEe-C
Confidence 34556888888888887776654 44333 2221 11 01111 11233456677777777665443 3
Q ss_pred CCcEEEE
Q psy11100 91 TGLIIVW 97 (110)
Q Consensus 91 ~~~i~~w 97 (110)
++.+...
T Consensus 224 ~G~~~~s 230 (327)
T 2xbg_A 224 GGKIAFS 230 (327)
T ss_dssp TTEEEEE
T ss_pred CceEEEe
Confidence 4555544
No 292
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=51.49 E-value=56 Score=22.54 Aligned_cols=22 Identities=36% Similarity=0.436 Sum_probs=16.6
Q ss_pred CCEEEEEecCCcEEEEEcCCCC
Q psy11100 26 QGWIAVGGDDGLLKVLKLDTGK 47 (110)
Q Consensus 26 ~~~l~~~~~~~~v~~~~~~~~~ 47 (110)
+..+..++.++.+..+|..++.
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~ 136 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGK 136 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCC
T ss_pred CCEEEEEeCCCEEEEEECCCCC
Confidence 4456677778889888988775
No 293
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=50.40 E-value=45 Score=21.00 Aligned_cols=77 Identities=13% Similarity=-0.010 Sum_probs=42.9
Q ss_pred ceEEEEEecCCCEEEEEe-cCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecCCCcE
Q psy11100 16 KVNCLAWHQNQGWIAVGG-DDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGLI 94 (110)
Q Consensus 16 ~v~~~~~~p~~~~l~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~~~i 94 (110)
....++++|++..|..+. ..+.|..++..... ........-.....+++. .+..+.+-...+.|
T Consensus 167 ~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~--------------~~~~~~~~~~~P~glav~-~~~lywtd~~~~~V 231 (318)
T 3sov_A 167 WPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTN--------------RQAVVKGSLPHPFALTLF-EDILYWTDWSTHSI 231 (318)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCS--------------CEEEECSCCSCEEEEEEE-TTEEEEEETTTTEE
T ss_pred CccEEEEeccCCEEEEEECCCCEEEEEcCCCCc--------------eEEEecCCCCCceEEEEe-CCEEEEEecCCCeE
Confidence 456788888665554443 45567777776432 111112223344566664 23445555567778
Q ss_pred EEEeCCCCCChhh
Q psy11100 95 IVWMLYKCNDDDE 107 (110)
Q Consensus 95 ~~w~~~~~~~~~~ 107 (110)
..++..+|.....
T Consensus 232 ~~~~~~~G~~~~~ 244 (318)
T 3sov_A 232 LACNKYTGEGLRE 244 (318)
T ss_dssp EEEETTTCCSCEE
T ss_pred EEEECCCCCceEE
Confidence 8888777665433
No 294
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=49.29 E-value=42 Score=20.38 Aligned_cols=24 Identities=4% Similarity=-0.258 Sum_probs=16.0
Q ss_pred CCCeEEEecCC-----CcEEEEeCCCCCC
Q psy11100 81 QYEKLTSSDET-----GLIIVWMLYKCND 104 (110)
Q Consensus 81 ~~~~l~s~~~~-----~~i~~w~~~~~~~ 104 (110)
++.+++.++.+ ..+.++|+.++.+
T Consensus 253 ~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 281 (301)
T 2vpj_A 253 RGRLYAIAGYDGNSLLSSIECYDPIIDSW 281 (301)
T ss_dssp TTEEEEECCBCSSSBEEEEEEEETTTTEE
T ss_pred CCEEEEEcCcCCCcccccEEEEcCCCCeE
Confidence 56666666544 3577888887765
No 295
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=48.44 E-value=51 Score=23.46 Aligned_cols=30 Identities=7% Similarity=-0.168 Sum_probs=20.0
Q ss_pred CeEEEEEcCCCCe-EEEecCCCcEEEEeCCC
Q psy11100 72 KVRAIIWNEQYEK-LTSSDETGLIIVWMLYK 101 (110)
Q Consensus 72 ~v~~~~~s~~~~~-l~s~~~~~~i~~w~~~~ 101 (110)
..+.++|+|++.. +++-...+.|..+++..
T Consensus 541 ~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG 571 (699)
T 1n7d_A 541 WPNGITLDLLSGRLYWVDSKLHSISSIDVNG 571 (699)
T ss_dssp SCCCEEECTTTCCEEEEETTTTEEEEECSSS
T ss_pred CccEEEEeccCCEEEEEecCCCeEEEEccCC
Confidence 3567899987555 44444567788888753
No 296
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=47.48 E-value=72 Score=22.51 Aligned_cols=17 Identities=18% Similarity=0.233 Sum_probs=14.0
Q ss_pred cCCCeEEEEEcCCCCeE
Q psy11100 69 HSGKVRAIIWNEQYEKL 85 (110)
Q Consensus 69 ~~~~v~~~~~s~~~~~l 85 (110)
...++..++|+|+++.+
T Consensus 529 ~gaE~TG~~fspDg~tl 545 (592)
T 3zwu_A 529 IGCEVTGISFSPDQKTL 545 (592)
T ss_dssp TTCEEEEEEECTTSSEE
T ss_pred CCccCcCeeECCCCCEE
Confidence 45789999999998774
No 297
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=47.18 E-value=56 Score=21.19 Aligned_cols=39 Identities=10% Similarity=-0.117 Sum_probs=28.7
Q ss_pred EeeccCCCeEEEEEcCCCCeEEEecCCCcEEEEeCCCCC
Q psy11100 65 SLQGHSGKVRAIIWNEQYEKLTSSDETGLIIVWMLYKCN 103 (110)
Q Consensus 65 ~~~~~~~~v~~~~~s~~~~~l~s~~~~~~i~~w~~~~~~ 103 (110)
.+...-.....++|.|+|.++++--..|.|..++..++.
T Consensus 26 ~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~ 64 (347)
T 3das_A 26 TVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGR 64 (347)
T ss_dssp EEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCC
T ss_pred EeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCc
Confidence 333334566799999999988877668899888765544
No 298
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=45.69 E-value=79 Score=22.48 Aligned_cols=72 Identities=11% Similarity=0.060 Sum_probs=44.2
Q ss_pred CceEEEEEecCCCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeec----cCCCeEEEEEcCCCCeEEEecC
Q psy11100 15 TKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQG----HSGKVRAIIWNEQYEKLTSSDE 90 (110)
Q Consensus 15 ~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~s~~~~~l~s~~~ 90 (110)
..|.++...++|.+.+. ..++-+..++..... ...+.. ....|.++...++|.+.++..
T Consensus 495 ~~i~~i~~d~~g~lWig-t~~~Gl~~~~~~~~~---------------~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~- 557 (781)
T 3v9f_A 495 NFVRSIAQDSEGRFWIG-TFGGGVGIYTPDMQL---------------VRKFNQYEGFCSNTINQIYRSSKGQMWLATG- 557 (781)
T ss_dssp SCEEEEEECTTCCEEEE-ESSSCEEEECTTCCE---------------EEEECTTTTCSCSCEEEEEECTTSCEEEEET-
T ss_pred ceeEEEEEcCCCCEEEE-EcCCCEEEEeCCCCe---------------EEEccCCCCCCCCeeEEEEECCCCCEEEEEC-
Confidence 56888888888875443 333346667765442 111211 235688888888888766655
Q ss_pred CCcEEEEeCCCCC
Q psy11100 91 TGLIIVWMLYKCN 103 (110)
Q Consensus 91 ~~~i~~w~~~~~~ 103 (110)
.|.+..+|..+++
T Consensus 558 ~Glv~~~d~~~~~ 570 (781)
T 3v9f_A 558 EGLVCFPSARNFD 570 (781)
T ss_dssp TEEEEESCTTTCC
T ss_pred CCceEEECCCCCc
Confidence 5655777776654
No 299
>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} SCOP: d.3.1.10
Probab=45.53 E-value=14 Score=21.99 Aligned_cols=33 Identities=6% Similarity=-0.033 Sum_probs=22.1
Q ss_pred eEEEEEcCCCCe-EEEecCCCcEEEEeCCCCCCh
Q psy11100 73 VRAIIWNEQYEK-LTSSDETGLIIVWMLYKCNDD 105 (110)
Q Consensus 73 v~~~~~s~~~~~-l~s~~~~~~i~~w~~~~~~~~ 105 (110)
+.++.|...+.+ +++.+.++.+.++|++-|.+.
T Consensus 121 llsl~f~~g~aHaia~S~~g~~~tlFDPN~GEF~ 154 (188)
T 1ukf_A 121 LLSLRFANVQGHAIACSCEGSQFKLFDPNLGEFQ 154 (188)
T ss_dssp EEEEEETTTEEEEEEEEEETTEEEEEETTTEEEE
T ss_pred EEEEEecCCCceeEEeccCCCeEEEeCCCCceee
Confidence 444555554444 666667889999999876543
No 300
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=44.75 E-value=51 Score=20.04 Aligned_cols=25 Identities=0% Similarity=-0.238 Sum_probs=16.9
Q ss_pred CCCeEEEecCC-----CcEEEEeCCCCCCh
Q psy11100 81 QYEKLTSSDET-----GLIIVWMLYKCNDD 105 (110)
Q Consensus 81 ~~~~l~s~~~~-----~~i~~w~~~~~~~~ 105 (110)
++.+++.++.+ ..+.+||+.++.+.
T Consensus 251 ~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 280 (302)
T 2xn4_A 251 NGLLYVVGGDDGSCNLASVEYYNPTTDKWT 280 (302)
T ss_dssp TTEEEEECCBCSSSBCCCEEEEETTTTEEE
T ss_pred CCEEEEECCcCCCcccccEEEEcCCCCeEE
Confidence 56666666643 34889999887663
No 301
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=42.92 E-value=63 Score=20.54 Aligned_cols=76 Identities=11% Similarity=-0.098 Sum_probs=42.2
Q ss_pred CceEEEEEecCCCEEEEEe-cCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecCCCc
Q psy11100 15 TKVNCLAWHQNQGWIAVGG-DDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETGL 93 (110)
Q Consensus 15 ~~v~~~~~~p~~~~l~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~~~ 93 (110)
.....++++|++..|..+. ..+.|..++..... ........-.....+++ ..+..+.+-...+.
T Consensus 203 ~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~--------------~~~~~~~~~~~P~giav-~~~~ly~td~~~~~ 267 (349)
T 3v64_C 203 FWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSH--------------RKAVISQGLPHPFAITV-FEDSLYWTDWHTKS 267 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS--------------CEEEECSSCSSEEEEEE-ETTEEEEEETTTTE
T ss_pred CCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCc--------------eEEEEeCCCCCceEEEE-ECCEEEEecCCCCe
Confidence 3467789998766554443 45667778776433 11112222234456666 34455555556667
Q ss_pred EEEEeCCCCCCh
Q psy11100 94 IIVWMLYKCNDD 105 (110)
Q Consensus 94 i~~w~~~~~~~~ 105 (110)
|...+..+|...
T Consensus 268 V~~~~~~~G~~~ 279 (349)
T 3v64_C 268 INSANKFTGKNQ 279 (349)
T ss_dssp EEEEETTTCCSC
T ss_pred EEEEEccCCCcc
Confidence 777775555543
No 302
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=42.05 E-value=75 Score=22.63 Aligned_cols=73 Identities=10% Similarity=0.022 Sum_probs=37.3
Q ss_pred eEEEEEecCCCEE-EEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeec---cCCCeEEEEEcCCCCeEEEecCCC
Q psy11100 17 VNCLAWHQNQGWI-AVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQG---HSGKVRAIIWNEQYEKLTSSDETG 92 (110)
Q Consensus 17 v~~~~~~p~~~~l-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~s~~~~~l~s~~~~~ 92 (110)
...++++|++..| ++-...+.|.++++.... ...+.. .-.....+++..+ .++++....+
T Consensus 542 PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~---------------~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~ 605 (699)
T 1n7d_A 542 PNGITLDLLSGRLYWVDSKLHSISSIDVNGGN---------------RKTILEDEKRLAHPFSLAVFED-KVFWTDIINE 605 (699)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEECSSSSC---------------CEEECCCSSSCSSCCCCEEETT-EEEEECSTTT
T ss_pred ccEEEEeccCCEEEEEecCCCeEEEEccCCCc---------------eEEEEecCCcCCCceEeEEECC-EEEEEeCCCC
Confidence 4457888865444 443445567777775432 011111 1112223444332 3455556667
Q ss_pred cEEEEeCCCCCCh
Q psy11100 93 LIIVWMLYKCNDD 105 (110)
Q Consensus 93 ~i~~w~~~~~~~~ 105 (110)
.|..++..+|...
T Consensus 606 ~V~~~d~~~G~~~ 618 (699)
T 1n7d_A 606 AIFSANRLTGSDV 618 (699)
T ss_dssp CEEEEETTTEEEE
T ss_pred eEEEEEccCCCce
Confidence 8888877665543
No 303
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=41.76 E-value=74 Score=21.04 Aligned_cols=36 Identities=14% Similarity=-0.006 Sum_probs=30.1
Q ss_pred CCCeEEEEEcCCCCeEEEecCCCcEEEEeCCCCCCh
Q psy11100 70 SGKVRAIIWNEQYEKLTSSDETGLIIVWMLYKCNDD 105 (110)
Q Consensus 70 ~~~v~~~~~s~~~~~l~s~~~~~~i~~w~~~~~~~~ 105 (110)
.+..-++..|+....+.-.+.-|.+.++|++++..+
T Consensus 259 ~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i 294 (365)
T 2xzh_A 259 NDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCI 294 (365)
T ss_dssp TCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEE
T ss_pred CCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEE
Confidence 456668888998888888888999999999998764
No 304
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=41.45 E-value=63 Score=20.11 Aligned_cols=72 Identities=13% Similarity=-0.043 Sum_probs=40.6
Q ss_pred CceEEEEEecCCCEEEEEecC--CcEEEEEcCCCCCcCCcccccccceeeeEEe-eccCCCeEEEEEcCCCCeEEEe-cC
Q psy11100 15 TKVNCLAWHQNQGWIAVGGDD--GLLKVLKLDTGKESTGQVAAANVNLAMNQSL-QGHSGKVRAIIWNEQYEKLTSS-DE 90 (110)
Q Consensus 15 ~~v~~~~~~p~~~~l~~~~~~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~s~-~~ 90 (110)
.....++++|.+..+...... +.|...+..... ...+ ...-...+.+++++++..+.-+ ..
T Consensus 120 ~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~---------------~~~~~~~~~~~P~gla~d~~~~~lY~~D~~ 184 (316)
T 1ijq_A 120 SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD---------------IYSLVTENIQWPNGITLDLLSGRLYWVDSK 184 (316)
T ss_dssp CCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC---------------EEEEECSSCSCEEEEEEETTTTEEEEEETT
T ss_pred CCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC---------------eEEEEECCCCCceEEEEeccCCEEEEEECC
Confidence 345667778755544333332 456555554332 1122 1223456789999876665444 45
Q ss_pred CCcEEEEeCCC
Q psy11100 91 TGLIIVWMLYK 101 (110)
Q Consensus 91 ~~~i~~w~~~~ 101 (110)
.+.|..+|+..
T Consensus 185 ~~~I~~~d~dg 195 (316)
T 1ijq_A 185 LHSISSIDVNG 195 (316)
T ss_dssp TTEEEEEETTS
T ss_pred CCeEEEEecCC
Confidence 66788888763
No 305
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=39.64 E-value=72 Score=20.26 Aligned_cols=72 Identities=13% Similarity=0.049 Sum_probs=40.8
Q ss_pred CceEEEEEecCCCEEEEEe-cC-CcEEEEEcCCCCCcCCcccccccceeeeEEe-eccCCCeEEEEEcCCCCeEE-EecC
Q psy11100 15 TKVNCLAWHQNQGWIAVGG-DD-GLLKVLKLDTGKESTGQVAAANVNLAMNQSL-QGHSGKVRAIIWNEQYEKLT-SSDE 90 (110)
Q Consensus 15 ~~v~~~~~~p~~~~l~~~~-~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~-s~~~ 90 (110)
.....++++|.+..+.... .. +.|...+..... ...+ ...-...+.++++|++..+. +-..
T Consensus 159 ~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~---------------~~~~~~~~~~~PnGla~d~~~~~lY~aD~~ 223 (349)
T 3v64_C 159 EKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG---------------RRIIADTHLFWPNGLTIDYAGRRMYWVDAK 223 (349)
T ss_dssp SCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS---------------CEESCCSSCSCEEEEEEETTTTEEEEEETT
T ss_pred CCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCC---------------cEEEEECCCCCcceEEEeCCCCEEEEEECC
Confidence 4566788888655444333 33 556666655432 1112 12234467899998666544 4445
Q ss_pred CCcEEEEeCCC
Q psy11100 91 TGLIIVWMLYK 101 (110)
Q Consensus 91 ~~~i~~w~~~~ 101 (110)
.+.|..+++..
T Consensus 224 ~~~I~~~~~dG 234 (349)
T 3v64_C 224 HHVIERANLDG 234 (349)
T ss_dssp TTEEEEEETTS
T ss_pred CCEEEEEeCCC
Confidence 66788888764
No 306
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=39.62 E-value=76 Score=20.57 Aligned_cols=33 Identities=15% Similarity=0.081 Sum_probs=24.6
Q ss_pred CCceEEEEEecCCCEEEEEecCCcEEEEEcCCC
Q psy11100 14 NTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTG 46 (110)
Q Consensus 14 ~~~v~~~~~~p~~~~l~~~~~~~~v~~~~~~~~ 46 (110)
-.....++|.|+|..+++-...|.|++++...+
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g 63 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTG 63 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTC
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECCCC
Confidence 355678999999998777665888888765433
No 307
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=38.47 E-value=1.6e+02 Score=23.89 Aligned_cols=28 Identities=14% Similarity=0.296 Sum_probs=19.0
Q ss_pred EEEecCCCEEEEEecCCcEEEEEcCCCC
Q psy11100 20 LAWHQNQGWIAVGGDDGLLKVLKLDTGK 47 (110)
Q Consensus 20 ~~~~p~~~~l~~~~~~~~v~~~~~~~~~ 47 (110)
+..++.-..+..-..-|.+.++|+.++.
T Consensus 264 ~~vs~k~g~iy~itk~G~~~~~d~~t~~ 291 (1630)
T 1xi4_A 264 MQISEKHDVVFLITKYGYIHLYDLETGT 291 (1630)
T ss_pred EEeccccCEEEEEecCceEEEEecccch
Confidence 4445544445555667889999999875
No 308
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=38.38 E-value=55 Score=23.35 Aligned_cols=30 Identities=3% Similarity=-0.104 Sum_probs=23.9
Q ss_pred CeEEEEEcCCCCe-EEEecCCCcEEEEeCCC
Q psy11100 72 KVRAIIWNEQYEK-LTSSDETGLIIVWMLYK 101 (110)
Q Consensus 72 ~v~~~~~s~~~~~-l~s~~~~~~i~~w~~~~ 101 (110)
....+..+|+|++ ++++..+.++.++++++
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k 354 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDK 354 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGG
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeeh
Confidence 3456888999999 55666789999999875
No 309
>1zso_A Hypothetical protein; structural genomics, PSI, protein structure initiative, STRU genomics of pathogenic protozoa consortium, SGPP; 2.17A {Plasmodium falciparum} SCOP: b.166.1.1
Probab=37.81 E-value=52 Score=19.03 Aligned_cols=32 Identities=13% Similarity=-0.048 Sum_probs=22.7
Q ss_pred eEEEEEcCCCCeEEEecCCCcEEEEeCCCCCC
Q psy11100 73 VRAIIWNEQYEKLTSSDETGLIIVWMLYKCND 104 (110)
Q Consensus 73 v~~~~~s~~~~~l~s~~~~~~i~~w~~~~~~~ 104 (110)
+--+.|.|++.+.+.+...|...=.|+..+.|
T Consensus 112 lEp~eF~p~~~w~a~~~esG~f~dvDLse~eW 143 (164)
T 1zso_A 112 IELIDFFPSNNFIVEDTKGKLYYDVNLSDQNW 143 (164)
T ss_dssp EEEEEECCCSCEEEEETTSCEEEEECCTTSCE
T ss_pred eeeEEEecCCcEEEEECCCCcEEeeecCCCce
Confidence 33478999999988876666544567776654
No 310
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=35.44 E-value=1.1e+02 Score=21.36 Aligned_cols=28 Identities=14% Similarity=0.066 Sum_probs=21.5
Q ss_pred CCC---CeEEEecCCCcEEEEeCCCCCChhh
Q psy11100 80 EQY---EKLTSSDETGLIIVWMLYKCNDDDE 107 (110)
Q Consensus 80 ~~~---~~l~s~~~~~~i~~w~~~~~~~~~~ 107 (110)
.+| ..++.++.+|.+.+.|..+|+.+.+
T Consensus 318 ~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~ 348 (599)
T 1w6s_A 318 KDGKARKLLTHPDRNGIVYTLDRTDGALVSA 348 (599)
T ss_dssp TTSCEEEEEEEECTTSEEEEEETTTCCEEEE
T ss_pred cCCcEEEEEEEECCCcEEEEEECCCCCEeec
Confidence 456 3567788899999999999886643
No 311
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=34.09 E-value=80 Score=19.20 Aligned_cols=24 Identities=13% Similarity=-0.119 Sum_probs=15.5
Q ss_pred CCCeEEEecCC------CcEEEEeCCCCCC
Q psy11100 81 QYEKLTSSDET------GLIIVWMLYKCND 104 (110)
Q Consensus 81 ~~~~l~s~~~~------~~i~~w~~~~~~~ 104 (110)
++.+++.++.+ ..+.++|+.++.+
T Consensus 101 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W 130 (306)
T 3ii7_A 101 EGKIYTSGGSEVGNSALYLFECYDTRTESW 130 (306)
T ss_dssp TTEEEEECCBBTTBSCCCCEEEEETTTTEE
T ss_pred CCEEEEECCCCCCCcEeeeEEEEeCCCCce
Confidence 55666666543 4578888877655
No 312
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=33.36 E-value=90 Score=19.57 Aligned_cols=25 Identities=12% Similarity=0.033 Sum_probs=14.7
Q ss_pred EEEecCCCEEEEEe--cCCc--EEEEEcC
Q psy11100 20 LAWHQNQGWIAVGG--DDGL--LKVLKLD 44 (110)
Q Consensus 20 ~~~~p~~~~l~~~~--~~~~--v~~~~~~ 44 (110)
..++|++..|.-.. .++. +...++.
T Consensus 109 ~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~d 137 (302)
T 3s25_A 109 IYASLIGNYIYYLHYDTQTATSLYRIRID 137 (302)
T ss_dssp EEEEEETTEEEEEEESSSSCEEEEEEETT
T ss_pred cEEEEeCCEEEEEeecCCCCceEEEEECC
Confidence 46788888877665 3343 4444444
No 313
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=33.28 E-value=84 Score=19.22 Aligned_cols=75 Identities=20% Similarity=0.141 Sum_probs=37.8
Q ss_pred CceEEEEEecCCCEEEEEecCC--cEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEecCCC
Q psy11100 15 TKVNCLAWHQNQGWIAVGGDDG--LLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSDETG 92 (110)
Q Consensus 15 ~~v~~~~~~p~~~~l~~~~~~~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~~~ 92 (110)
+....+++.++|+++++..... .+..++...+. +..+... ........++..+.+..+++-..++
T Consensus 72 ~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~------------~~~~~~~-~~~~~~~g~~~~~~~~~~v~d~~~g 138 (306)
T 2p4o_A 72 GKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGT------------VETLLTL-PDAIFLNGITPLSDTQYLTADSYRG 138 (306)
T ss_dssp SEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSC------------EEEEEEC-TTCSCEEEEEESSSSEEEEEETTTT
T ss_pred CCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCe------------EEEEEeC-CCccccCcccccCCCcEEEEECCCC
Confidence 3566788888888655443222 35555555443 0011111 1112233444445444455544577
Q ss_pred cEEEEeCCCC
Q psy11100 93 LIIVWMLYKC 102 (110)
Q Consensus 93 ~i~~w~~~~~ 102 (110)
.|+.+|..++
T Consensus 139 ~i~~~d~~~~ 148 (306)
T 2p4o_A 139 AIWLIDVVQP 148 (306)
T ss_dssp EEEEEETTTT
T ss_pred eEEEEeCCCC
Confidence 8888887643
No 314
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=32.64 E-value=1e+02 Score=19.90 Aligned_cols=73 Identities=12% Similarity=-0.017 Sum_probs=40.9
Q ss_pred CceEEEEEecCCCEEEEEec-C-CcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEE-EecCC
Q psy11100 15 TKVNCLAWHQNQGWIAVGGD-D-GLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLT-SSDET 91 (110)
Q Consensus 15 ~~v~~~~~~p~~~~l~~~~~-~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-s~~~~ 91 (110)
.....++++|.+..|..... . +.|...+..... ........-...+.++|+|++..|. +-...
T Consensus 202 ~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~--------------~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~ 267 (386)
T 3v65_B 202 EKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG--------------RRIIADTHLFWPNGLTIDYAGRRMYWVDAKH 267 (386)
T ss_dssp SCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS--------------CEEEECSSCSCEEEEEEEGGGTEEEEEETTT
T ss_pred CCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCC--------------cEEEEECCCCCeeeEEEeCCCCEEEEEECCC
Confidence 45667888886555444332 2 456666655432 1111222234467899997666544 44456
Q ss_pred CcEEEEeCCC
Q psy11100 92 GLIIVWMLYK 101 (110)
Q Consensus 92 ~~i~~w~~~~ 101 (110)
+.|..+++..
T Consensus 268 ~~I~~~d~dG 277 (386)
T 3v65_B 268 HVIERANLDG 277 (386)
T ss_dssp TEEEEECTTS
T ss_pred CEEEEEeCCC
Confidence 6788888754
No 315
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=32.00 E-value=1.3e+02 Score=20.88 Aligned_cols=36 Identities=14% Similarity=-0.006 Sum_probs=30.0
Q ss_pred CCCeEEEEEcCCCCeEEEecCCCcEEEEeCCCCCCh
Q psy11100 70 SGKVRAIIWNEQYEKLTSSDETGLIIVWMLYKCNDD 105 (110)
Q Consensus 70 ~~~v~~~~~s~~~~~l~s~~~~~~i~~w~~~~~~~~ 105 (110)
.+..-.+..|+....+.-.+.-|.+.++|++++..+
T Consensus 258 ~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i 293 (494)
T 1bpo_A 258 NDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCI 293 (494)
T ss_dssp TCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEE
T ss_pred cCceeEEEecccCCEEEEEecCceEEEEecccceee
Confidence 455668888998888888888999999999998764
No 316
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=29.77 E-value=99 Score=18.93 Aligned_cols=13 Identities=8% Similarity=-0.271 Sum_probs=9.1
Q ss_pred cEEEEeCCCCCCh
Q psy11100 93 LIIVWMLYKCNDD 105 (110)
Q Consensus 93 ~i~~w~~~~~~~~ 105 (110)
.+.++|+.++++.
T Consensus 269 ~v~~yd~~~~~W~ 281 (315)
T 4asc_A 269 DIWRYNEEEKKWE 281 (315)
T ss_dssp EEEEEETTTTEEE
T ss_pred cEEEecCCCChhh
Confidence 3677888877653
No 317
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=29.33 E-value=1e+02 Score=19.08 Aligned_cols=31 Identities=16% Similarity=0.083 Sum_probs=18.9
Q ss_pred CceEEEEEecCCCEEE-EEecCCcEEEEEcCC
Q psy11100 15 TKVNCLAWHQNQGWIA-VGGDDGLLKVLKLDT 45 (110)
Q Consensus 15 ~~v~~~~~~p~~~~l~-~~~~~~~v~~~~~~~ 45 (110)
.....++|++++..+. +-...+.|..++...
T Consensus 30 ~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g 61 (316)
T 1ijq_A 30 RNVVALDTEVASNRIYWSDLSQRMICSTQLDR 61 (316)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--
T ss_pred CceEEEEEEeCCCEEEEEECCCCcEEEEECCC
Confidence 3456788988655444 444456788777764
No 318
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=28.69 E-value=1.2e+02 Score=19.66 Aligned_cols=61 Identities=8% Similarity=0.016 Sum_probs=35.6
Q ss_pred ceEEEEEecCCCEEEEEe-cCCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcC-CCCeEEEe
Q psy11100 16 KVNCLAWHQNQGWIAVGG-DDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNE-QYEKLTSS 88 (110)
Q Consensus 16 ~v~~~~~~p~~~~l~~~~-~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~ 88 (110)
..+.++|+||++.+..+. ..+.+..|++.... .. .....+ .-....-.+++.+ +|.+++++
T Consensus 222 ~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g----~l-------~~~~~~-~~~g~PDGi~vD~e~G~lwva~ 284 (355)
T 3sre_A 222 FANGINISPDGKYVYIAELLAHKIHVYEKHANW----TL-------TPLRVL-SFDTLVDNISVDPVTGDLWVGC 284 (355)
T ss_dssp SEEEEEECTTSSEEEEEEGGGTEEEEEEECTTS----CE-------EEEEEE-ECSSEEEEEEECTTTCCEEEEE
T ss_pred ccCcceECCCCCEEEEEeCCCCeEEEEEECCCC----cE-------ecCEEE-eCCCCCceEEEeCCCCcEEEEe
Confidence 456699999998766554 46788888886421 10 011122 1123445677777 47776544
No 319
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=28.55 E-value=1.5e+02 Score=20.57 Aligned_cols=27 Identities=11% Similarity=0.076 Sum_probs=21.4
Q ss_pred CCCC---eEEEecCCCcEEEEeCCCCCChh
Q psy11100 80 EQYE---KLTSSDETGLIIVWMLYKCNDDD 106 (110)
Q Consensus 80 ~~~~---~l~s~~~~~~i~~w~~~~~~~~~ 106 (110)
.+|+ .++.++.+|.++++|..+|+.+.
T Consensus 331 ~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw 360 (582)
T 1flg_A 331 KDGKIVKATAHADRNGFFYVVDRSNGKLQN 360 (582)
T ss_dssp SSSCEEEEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCCCEEEEEEEECCCceEEEEECCCCCEec
Confidence 4564 57778889999999999888654
No 320
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=26.75 E-value=1.5e+02 Score=19.88 Aligned_cols=26 Identities=15% Similarity=0.211 Sum_probs=19.5
Q ss_pred CCCeEEEEEcCCCC-eEEEecCCCcEE
Q psy11100 70 SGKVRAIIWNEQYE-KLTSSDETGLII 95 (110)
Q Consensus 70 ~~~v~~~~~s~~~~-~l~s~~~~~~i~ 95 (110)
...+..+++.|||. ++++.+..|.+.
T Consensus 404 ~~R~~dv~~gpDG~~Lyv~~d~~G~i~ 430 (454)
T 1cru_A 404 NNRYRDVIASPDGNVLYVLTDTAGNVQ 430 (454)
T ss_dssp SSCEEEEEECTTSSCEEEEECSSCCEE
T ss_pred CCCceeEEECCCCCEEEEEECCCCCCc
Confidence 36888999999997 766666566554
No 321
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=25.07 E-value=1.5e+02 Score=19.31 Aligned_cols=72 Identities=11% Similarity=-0.037 Sum_probs=39.1
Q ss_pred ceEEEEEecCCCEEEEEec--CCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEec-CCC
Q psy11100 16 KVNCLAWHQNQGWIAVGGD--DGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSSD-ETG 92 (110)
Q Consensus 16 ~v~~~~~~p~~~~l~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-~~~ 92 (110)
....+++.|.+..|..... .+.|...+..... ........-.....+++++++..|.-++ ...
T Consensus 203 ~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~--------------~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~ 268 (400)
T 3p5b_L 203 KPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD--------------IYSLVTENIQWPNGITLDLLSGRLYWVDSKLH 268 (400)
T ss_dssp CEEEEEEETTTTEEEEEECSSSCCEEEEETTSCS--------------CEEEECSSCSCEEEEEEETTTTEEEEEETTTT
T ss_pred CcceEEEecccCeEEEEeCCCCCEEEEEeCCCCc--------------cEEEEECCCCceEEEEEEeCCCEEEEEECCCC
Confidence 3556777775444443332 2456666655432 1111222234567888888766655443 456
Q ss_pred cEEEEeCCC
Q psy11100 93 LIIVWMLYK 101 (110)
Q Consensus 93 ~i~~w~~~~ 101 (110)
.|..+|+..
T Consensus 269 ~I~~~d~dG 277 (400)
T 3p5b_L 269 SISSIDVNG 277 (400)
T ss_dssp EEEEEETTS
T ss_pred EEEEEeCCC
Confidence 777777654
No 322
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=24.26 E-value=1.8e+02 Score=20.02 Aligned_cols=60 Identities=12% Similarity=0.146 Sum_probs=35.9
Q ss_pred ceEEEEEecC--CCEEEEEecCCcEEEEEcCCCCCcCCcccccccceeeeEEeecc----CCCeEEEEE-------cCCC
Q psy11100 16 KVNCLAWHQN--QGWIAVGGDDGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGH----SGKVRAIIW-------NEQY 82 (110)
Q Consensus 16 ~v~~~~~~p~--~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~-------s~~~ 82 (110)
....++++|. +++.++-...+.+++.|..... +..+... ......++| ++++
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~---------------v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G 204 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRM---------------LSSPLNINTIPTNRIRSIAFNKKIEGYADEA 204 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTE---------------EEEEECCTTSSCSBEEEEEECCCBTTTBCTT
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCE---------------EEEEEccCccccCCCcEEEEeecccccCCCC
Confidence 4567899983 4444444434567777777654 2222211 235789999 9999
Q ss_pred CeEEEecC
Q psy11100 83 EKLTSSDE 90 (110)
Q Consensus 83 ~~l~s~~~ 90 (110)
..++.++.
T Consensus 205 ~~lyvad~ 212 (496)
T 3kya_A 205 EYMIVAID 212 (496)
T ss_dssp CEEEEEEC
T ss_pred CEEEEEeC
Confidence 86554443
No 323
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=23.97 E-value=1.3e+02 Score=18.35 Aligned_cols=25 Identities=4% Similarity=-0.266 Sum_probs=16.3
Q ss_pred CCCeEEEecCC-----CcEEEEeCCCCCCh
Q psy11100 81 QYEKLTSSDET-----GLIIVWMLYKCNDD 105 (110)
Q Consensus 81 ~~~~l~s~~~~-----~~i~~w~~~~~~~~ 105 (110)
++.+++.++.+ ..+.++|+.++.+.
T Consensus 262 ~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 291 (308)
T 1zgk_A 262 QGRIYVLGGYDGHTFLDSVECYDPDTDTWS 291 (308)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEE
T ss_pred CCEEEEEcCcCCCcccceEEEEcCCCCEEe
Confidence 56666666533 35788898877653
No 324
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=21.57 E-value=1.6e+02 Score=18.46 Aligned_cols=73 Identities=10% Similarity=-0.020 Sum_probs=39.9
Q ss_pred CceEEEEEecCCCEEEEEec--CCcEEEEEcCCCCCcCCcccccccceeeeEEeeccCCCeEEEEEcCCCCeEEEe-cCC
Q psy11100 15 TKVNCLAWHQNQGWIAVGGD--DGLLKVLKLDTGKESTGQVAAANVNLAMNQSLQGHSGKVRAIIWNEQYEKLTSS-DET 91 (110)
Q Consensus 15 ~~v~~~~~~p~~~~l~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~-~~~ 91 (110)
.....+++.|.+..+..... .+.|...+..... ........-...+.+++++++..+.-+ ...
T Consensus 122 ~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~--------------~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~ 187 (318)
T 3sov_A 122 DQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS--------------RFIIINSEIYWPNGLTLDYEEQKLYWADAKL 187 (318)
T ss_dssp SSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCS--------------CEEEECSSCSCEEEEEEETTTTEEEEEETTT
T ss_pred CCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCC--------------eEEEEECCCCCccEEEEeccCCEEEEEECCC
Confidence 34566777776444444332 3455555554322 111112222446789999876664444 456
Q ss_pred CcEEEEeCCC
Q psy11100 92 GLIIVWMLYK 101 (110)
Q Consensus 92 ~~i~~w~~~~ 101 (110)
+.|..+++..
T Consensus 188 ~~I~~~d~dG 197 (318)
T 3sov_A 188 NFIHKSNLDG 197 (318)
T ss_dssp TEEEEEETTS
T ss_pred CEEEEEcCCC
Confidence 7788888753
Done!