Query psy11101
Match_columns 157
No_of_seqs 107 out of 356
Neff 6.0
Searched_HMMs 46136
Date Fri Aug 16 18:00:58 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11101.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/11101hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd01227 PH_Dbs Dbs (DBL's big 100.0 4.9E-38 1.1E-42 238.6 13.5 125 18-147 1-129 (133)
2 cd01232 PH_TRIO Trio pleckstri 100.0 4.2E-37 9.2E-42 228.1 11.5 113 16-134 1-113 (114)
3 KOG0689|consensus 100.0 2.2E-29 4.8E-34 222.1 5.2 133 1-154 240-381 (448)
4 KOG4240|consensus 99.9 2.2E-28 4.8E-33 230.0 -2.5 130 2-148 809-942 (1025)
5 cd01222 PH_clg Clg (common-sit 99.9 4.8E-24 1E-28 154.1 10.7 92 17-134 1-96 (97)
6 cd01223 PH_Vav Vav pleckstrin 99.2 1.4E-10 3E-15 86.4 11.2 101 18-133 2-111 (116)
7 PF15411 PH_10: Pleckstrin hom 99.2 6.2E-11 1.4E-15 88.2 8.4 96 14-129 1-116 (116)
8 cd01219 PH_FGD FGD (faciogenit 99.2 4.1E-10 9E-15 81.1 11.3 77 41-134 16-100 (101)
9 cd01261 PH_SOS Son of Sevenles 99.2 7.7E-10 1.7E-14 82.0 11.5 93 19-133 3-109 (112)
10 cd01224 PH_Collybistin Collybi 99.1 1.3E-09 2.8E-14 80.5 11.5 97 19-130 1-104 (109)
11 cd01220 PH_CDEP Chondrocyte-de 99.1 3.7E-09 8.1E-14 76.4 11.3 91 19-134 1-98 (99)
12 cd01218 PH_phafin2 Phafin2 Pl 99.0 7.6E-09 1.6E-13 75.7 11.5 79 41-135 16-100 (104)
13 cd01221 PH_ephexin Ephexin Ple 98.6 1.1E-06 2.3E-11 66.4 11.5 106 20-129 3-118 (125)
14 PF15405 PH_5: Pleckstrin homo 98.4 1.7E-06 3.7E-11 65.8 8.1 87 44-131 18-133 (135)
15 cd01228 PH_BCR-related BCR (br 98.2 1.3E-05 2.9E-10 57.8 8.2 75 41-133 15-94 (96)
16 smart00233 PH Pleckstrin homol 98.1 8.4E-05 1.8E-09 49.4 10.8 80 41-133 16-101 (102)
17 KOG3518|consensus 98.0 1.6E-06 3.5E-11 75.4 -0.0 105 5-135 319-434 (521)
18 cd01226 PH_exo84 Exocyst compl 97.9 0.00011 2.3E-09 53.6 9.3 77 40-133 15-98 (100)
19 PF00169 PH: PH domain; Inter 97.9 0.00036 7.8E-09 47.3 11.2 96 21-133 2-103 (104)
20 cd00821 PH Pleckstrin homology 97.4 0.002 4.3E-08 42.2 8.5 76 41-131 14-95 (96)
21 cd01255 PH_TIAM TIAM Pleckstri 97.3 0.0031 6.6E-08 49.0 9.7 107 17-135 24-156 (160)
22 KOG4424|consensus 97.2 0.00055 1.2E-08 62.9 5.7 104 10-137 261-373 (623)
23 cd00900 PH-like Pleckstrin hom 97.2 0.0054 1.2E-07 40.4 9.1 78 41-131 17-98 (99)
24 cd01225 PH_Cool_Pix Cool (clon 97.2 0.007 1.5E-07 44.9 10.1 100 10-131 1-107 (111)
25 KOG2996|consensus 96.9 0.004 8.6E-08 57.8 8.0 107 6-129 392-507 (865)
26 KOG3523|consensus 96.7 0.0065 1.4E-07 56.4 7.8 109 19-130 474-591 (695)
27 cd01246 PH_oxysterol_bp Oxyste 96.6 0.049 1.1E-06 36.7 9.9 72 42-131 14-90 (91)
28 cd01233 Unc104 Unc-104 pleckst 95.9 0.094 2E-06 37.2 8.5 77 44-133 19-98 (100)
29 cd01264 PH_melted Melted pleck 95.6 0.02 4.2E-07 41.7 4.2 33 95-132 68-100 (101)
30 cd01247 PH_GPBP Goodpasture an 95.3 0.05 1.1E-06 38.3 5.2 35 93-131 56-90 (91)
31 cd01250 PH_centaurin Centaurin 95.2 0.41 8.9E-06 32.3 9.4 79 42-131 15-93 (94)
32 KOG2070|consensus 94.6 0.057 1.2E-06 49.5 4.9 103 5-130 294-403 (661)
33 cd01253 PH_beta_spectrin Beta- 94.6 0.33 7.2E-06 34.2 8.0 78 44-131 24-103 (104)
34 KOG3521|consensus 94.5 0.044 9.6E-07 51.6 4.2 92 19-133 426-526 (846)
35 cd01251 PH_centaurin_alpha Cen 94.5 0.14 3.1E-06 36.6 5.9 34 96-134 68-101 (103)
36 cd01252 PH_cytohesin Cytohesin 94.3 0.6 1.3E-05 34.2 9.2 80 43-134 16-114 (125)
37 cd01260 PH_CNK Connector enhan 94.1 0.45 9.7E-06 33.0 7.8 72 44-131 21-95 (96)
38 cd01238 PH_Tec Tec pleckstrin 94.1 0.09 1.9E-06 37.9 4.3 34 94-132 73-106 (106)
39 cd01265 PH_PARIS-1 PARIS-1 ple 93.9 0.13 2.9E-06 36.2 4.8 33 95-132 61-93 (95)
40 cd01244 PH_RasGAP_CG9209 RAS_G 93.9 0.57 1.2E-05 33.7 8.1 75 44-132 22-98 (98)
41 KOG0931|consensus 93.5 0.051 1.1E-06 49.4 2.4 93 25-135 423-527 (627)
42 KOG3520|consensus 93.3 0.026 5.7E-07 55.6 0.3 96 17-136 618-724 (1167)
43 cd01235 PH_SETbf Set binding f 93.1 1.7 3.7E-05 30.0 9.3 32 96-132 69-100 (101)
44 cd01266 PH_Gab Gab (Grb2-assoc 92.7 0.31 6.8E-06 34.9 5.2 23 110-132 85-107 (108)
45 PF15409 PH_8: Pleckstrin homo 90.0 0.7 1.5E-05 32.9 4.6 33 94-131 55-87 (89)
46 cd01241 PH_Akt Akt pleckstrin 89.5 5.9 0.00013 28.1 9.1 37 94-132 64-101 (102)
47 KOG0930|consensus 88.9 4 8.6E-05 35.4 9.1 89 45-145 279-389 (395)
48 cd01230 PH_EFA6 EFA6 Pleckstri 87.6 1.6 3.4E-05 32.4 5.2 80 44-133 27-111 (117)
49 PF15406 PH_6: Pleckstrin homo 86.9 1.4 3.1E-05 32.7 4.5 31 95-130 80-110 (112)
50 cd01249 PH_oligophrenin Oligop 86.8 1.2 2.6E-05 32.7 4.1 31 96-129 71-101 (104)
51 cd01231 PH_Lnk LNK-family Plec 86.8 1.7 3.7E-05 32.0 4.9 33 95-131 74-106 (107)
52 cd01257 PH_IRS Insulin recepto 85.8 1.6 3.6E-05 31.4 4.4 32 96-132 70-101 (101)
53 cd01245 PH_RasGAP_CG5898 RAS G 85.1 1.9 4.1E-05 31.1 4.4 34 94-131 64-97 (98)
54 cd01236 PH_outspread Outspread 84.4 13 0.00028 27.0 8.6 33 94-131 70-102 (104)
55 cd01229 PH_etc2 Epithelial cel 84.1 3.4 7.3E-05 31.3 5.5 88 39-131 21-125 (129)
56 PF15410 PH_9: Pleckstrin homo 84.0 2.5 5.5E-05 30.9 4.8 33 95-131 84-116 (119)
57 cd01237 Unc112 Unc-112 pleckst 81.3 17 0.00037 26.7 8.2 85 39-131 15-101 (106)
58 PTZ00267 NIMA-related protein 80.4 3.8 8.2E-05 36.3 5.4 36 94-133 441-476 (478)
59 PTZ00283 serine/threonine prot 79.0 3.9 8.4E-05 36.7 5.1 36 94-133 454-489 (496)
60 PF15404 PH_4: Pleckstrin homo 78.8 5.8 0.00013 31.9 5.5 20 111-130 163-182 (185)
61 cd01242 PH_ROK Rok (Rho- assoc 74.2 10 0.00022 28.3 5.3 39 91-132 71-109 (112)
62 cd01254 PH_PLD Phospholipase D 72.2 11 0.00024 27.6 5.2 32 95-131 89-120 (121)
63 cd01248 PH_PLC Phospholipase C 72.0 9.9 0.00021 27.3 4.8 38 94-132 78-115 (115)
64 KOG0521|consensus 69.8 8.4 0.00018 37.3 5.1 37 94-135 334-370 (785)
65 cd01243 PH_MRCK MRCK (myotonic 64.9 26 0.00056 26.5 5.8 42 91-132 75-118 (122)
66 KOG3524|consensus 55.1 4.8 0.0001 38.6 0.5 86 40-130 607-708 (850)
67 PF12814 Mcp5_PH: Meiotic cell 51.3 94 0.002 22.7 11.7 106 21-134 9-122 (123)
68 PRK15366 type III secretion sy 44.9 46 0.001 23.3 4.0 35 118-152 14-48 (80)
69 KOG4305|consensus 41.6 18 0.00039 36.1 2.1 33 98-132 653-685 (1029)
70 KOG3723|consensus 39.6 44 0.00096 31.8 4.2 40 94-138 802-841 (851)
71 cd01240 PH_beta-ARK Beta adren 38.6 90 0.0019 23.4 4.9 45 91-140 61-105 (116)
72 PF14593 PH_3: PH domain; PDB: 37.3 1.4E+02 0.003 21.6 5.8 72 43-136 27-102 (104)
73 KOG3531|consensus 36.9 25 0.00053 34.7 2.2 100 7-133 737-844 (1036)
74 PF15413 PH_11: Pleckstrin hom 34.5 61 0.0013 23.3 3.6 33 94-131 79-111 (112)
75 PF15408 PH_7: Pleckstrin homo 30.0 63 0.0014 23.3 2.9 33 96-130 62-94 (104)
76 KOG3640|consensus 29.5 72 0.0016 32.0 4.0 33 111-147 1084-1116(1116)
77 KOG0088|consensus 25.3 86 0.0019 25.3 3.2 36 100-135 81-117 (218)
78 KOG2059|consensus 25.0 1.4E+02 0.0029 29.1 4.9 79 41-133 584-664 (800)
79 KOG4269|consensus 25.0 24 0.00053 34.9 0.0 36 21-64 555-590 (1112)
80 PF15277 Sec3-PIP2_bind: Exocy 21.8 2.9E+02 0.0063 19.3 7.3 33 95-133 56-88 (91)
81 PF07875 Coat_F: Coat F domain 21.1 79 0.0017 20.3 1.9 31 111-141 22-52 (64)
82 TIGR02501 type_III_yscE type I 20.9 1.9E+02 0.0042 19.3 3.8 31 121-151 14-44 (67)
83 KOG3551|consensus 20.6 1.7E+02 0.0036 26.7 4.3 36 93-131 234-269 (506)
No 1
>cd01227 PH_Dbs Dbs (DBL's big sister) pleckstrin homology (PH) domain. Dbs (DBL's big sister) pleckstrin homology (PH) domain. Dbs is a guanine nucleotide exchange factor (GEF), which contains spectrin repeats, a rhoGEF (DH) domain and a PH domain. The Dbs PH domain participates in binding to both the Cdc42 and RhoA GTPases. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=100.00 E-value=4.9e-38 Score=238.56 Aligned_cols=125 Identities=19% Similarity=0.261 Sum_probs=96.8
Q ss_pred cceeeeccEEEEECCCC-C--CCCcCCCCceeEEEeecceeEEEEeecCC-CCceeeeeeceecCCCCcCCCCCCCCCCC
Q psy11101 18 GKLLMRGPLYCTETSVA-S--SSSSNSRGKELQVFLFEQSMIFSEAVGKK-TQFSVNKMSVEEKVPEELTPAGSGGSRGG 93 (157)
Q Consensus 18 G~LL~qd~f~V~e~~~~-~--~~~~~~k~keR~VFLFEq~lifsk~~~~k-~~~~~~~~~l~e~~~~~~~~~g~~~~~~g 93 (157)
|+||+||+|+||++.+. . .+..+.|+++|||||||++|||||+.+++ .+|....+.++.+... ..+|++|+++|
T Consensus 1 G~ll~Qd~f~Vw~~~~~~~~~k~~~r~K~~eRhVFLFE~~viF~K~~~~~~~~~~~p~Y~yK~~ikl--s~lglte~v~g 78 (133)
T cd01227 1 GKLLMQGSFSVWTDHKKGHTKKELARFKPMQRHIFLHEKAVLFCKKREENGEGEKAPSYSFKQSLKM--TAVGITENVKG 78 (133)
T ss_pred CCceEecceEEEEccccccchhhhhccCCceeEEEEecceEEEEEEeccCCCCCcceeEEEeeeEEe--ecccccccCCC
Confidence 89999999999987421 1 12335689999999999999999998532 2222112222222221 34677777788
Q ss_pred CccEEEEEecCCCCCCceEEEEcCChHHHHHHHHHHHHHHHHHHHHHHhccCch
Q psy11101 94 LSAYFLLKSIDPKKPALTFLCQAPTEESRSEWLRCLGLILQTQRDFLKAIQSPI 147 (157)
Q Consensus 94 d~~kF~iw~~~~~~~~~~~~LqA~s~e~K~~Wv~~I~~iL~~Q~~~l~al~~Pi 147 (157)
|+|||+||++++ .++|+|||+|+++|++|+++|++||++|+++|+|+++|-
T Consensus 79 d~~kFeiw~~~~---~~~yilqA~t~e~K~~Wv~~I~~iL~~Q~~~lk~~~~~~ 129 (133)
T cd01227 79 DTKKFEIWYNAR---EEVYILQAPTPEIKAAWVNEIRKVLTSQLQACKEASQHR 129 (133)
T ss_pred CccEEEEEeCCC---CcEEEEEcCCHHHHHHHHHHHHHHHHHHHHHHHhhcCcc
Confidence 999999999863 479999999999999999999999999999999999993
No 2
>cd01232 PH_TRIO Trio pleckstrin homology (PH) domain. Trio pleckstrin homology (PH) domain. Trio is a multidomain signaling protein that contains two RhoGEF(DH)-PH domains in tandem. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=100.00 E-value=4.2e-37 Score=228.08 Aligned_cols=113 Identities=34% Similarity=0.477 Sum_probs=87.3
Q ss_pred cccceeeeccEEEEECCCCCCCCcCCCCceeEEEeecceeEEEEeecCCCCceeeeeeceecCCCCcCCCCCCCCCCCCc
Q psy11101 16 AQGKLLMRGPLYCTETSVASSSSSNSRGKELQVFLFEQSMIFSEAVGKKTQFSVNKMSVEEKVPEELTPAGSGGSRGGLS 95 (157)
Q Consensus 16 ~qG~LL~qd~f~V~e~~~~~~~~~~~k~keR~VFLFEq~lifsk~~~~k~~~~~~~~~l~e~~~~~~~~~g~~~~~~gd~ 95 (157)
|||+||+||+|+||++++ +.++|+++|||||||++|||||+++.+++|....+.++.+... ..+|++|+++||+
T Consensus 1 ~qG~Ll~Q~~f~v~~~~~----~~~~K~~eR~vFLFe~~lvfsk~~~~~~~~~~~~Y~yK~~ikl--s~l~l~e~v~gd~ 74 (114)
T cd01232 1 AQGKLLLQDTFQVWDPKA----GLIQKGRERRVFLFEQSIIFAKEVKKKKQFGNPKYIYKSKLQV--SKMGLTEHVEGDP 74 (114)
T ss_pred CCCceEEEccEEEEeCCc----cccCCCceeEEEEeeceEEEEEEeccCCCCCceeEEEecceee--eeeEeEEccCCCC
Confidence 699999999999999963 2568999999999999999999987654332111111111110 1234444455689
Q ss_pred cEEEEEecCCCCCCceEEEEcCChHHHHHHHHHHHHHHH
Q psy11101 96 AYFLLKSIDPKKPALTFLCQAPTEESRSEWLRCLGLILQ 134 (157)
Q Consensus 96 ~kF~iw~~~~~~~~~~~~LqA~s~e~K~~Wv~~I~~iL~ 134 (157)
|+|+||+++|..+.++|+|||+|+++|++|+++|++||+
T Consensus 75 ~kF~i~~~~~~~~~~~~ilqA~s~e~K~~W~~~I~~il~ 113 (114)
T cd01232 75 CRFALWSGDPPISDNRIILKANSQETKQEWVKKIREILQ 113 (114)
T ss_pred ceEEEEeCCCCCCceEEEEECCCHHHHHHHHHHHHHHhh
Confidence 999999998876778999999999999999999999985
No 3
>KOG0689|consensus
Probab=99.95 E-value=2.2e-29 Score=222.14 Aligned_cols=133 Identities=29% Similarity=0.485 Sum_probs=116.9
Q ss_pred CcchhhhhCCccChhcccceeeeccEEEEECCCCCCCCcCCCCceeEEEeecceeEEEEeecCCC---------Cceeee
Q psy11101 1 MMDVARLKGFDGKITAQGKLLMRGPLYCTETSVASSSSSNSRGKELQVFLFEQSMIFSEAVGKKT---------QFSVNK 71 (157)
Q Consensus 1 mm~v~~l~g~dg~l~~qG~LL~qd~f~V~e~~~~~~~~~~~k~keR~VFLFEq~lifsk~~~~k~---------~~~~~~ 71 (157)
||.|++++||+|++++||+|++||+|.|+++.. .+.++|+|||||+++||||...... .|++++
T Consensus 240 ~~~~~~l~g~e~~l~~qG~l~~qd~f~v~~~~~-------~~~~~R~vflFe~~v~Fse~~~~~~~~~~y~yk~~ik~~~ 312 (448)
T KOG0689|consen 240 MMQVGRLQGFEGDLKAQGKLRRQDEFDVSHGRA-------GKKKDRRVFLFERLVVFSKLRKPESGTETYVYKQHIKVND 312 (448)
T ss_pred hhccchhcccccchHhhccccccCccceeeccc-------cccchhhhhhhhhhhhhhhhhcCCCCCcceeeecchhhhh
Confidence 799999999999999999999999999999953 4578999999999999999986322 233777
Q ss_pred eeceecCCCCcCCCCCCCCCCCCccEEEEEecCCCCCCceEEEEcCChHHHHHHHHHHHHHHHHHHHHHHhccCchHHHh
Q psy11101 72 MSVEEKVPEELTPAGSGGSRGGLSAYFLLKSIDPKKPALTFLCQAPTEESRSEWLRCLGLILQTQRDFLKAIQSPIAYQK 151 (157)
Q Consensus 72 ~~l~e~~~~~~~~~g~~~~~~gd~~kF~iw~~~~~~~~~~~~LqA~s~e~K~~Wv~~I~~iL~~Q~~~l~al~~Pi~yq~ 151 (157)
++|+++++ .++++|+||++++..+ ++|+|||.|.++|++|+++|.++||.|..++++++.|++|++
T Consensus 313 lgle~n~~-------------~s~~rF~i~~r~~~~~-~~~vlqa~s~~~k~~W~~~i~~~l~~Q~a~~n~~~~p~~~~s 378 (448)
T KOG0689|consen 313 LGLEENND-------------NSASRFEIWFRGRKKR-EAYVLQAGSKEIKYAWTRAISSLLWQQKALLNKLVRPARYES 378 (448)
T ss_pred eeeeccCC-------------CCCcchhhhhhccccc-ceeEEeeCCHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHhh
Confidence 77777665 4789999999987654 799999999999999999999999999999999999999998
Q ss_pred hhc
Q psy11101 152 ELS 154 (157)
Q Consensus 152 ~~~ 154 (157)
-.+
T Consensus 379 ~~~ 381 (448)
T KOG0689|consen 379 MES 381 (448)
T ss_pred hcc
Confidence 654
No 4
>KOG4240|consensus
Probab=99.93 E-value=2.2e-28 Score=229.96 Aligned_cols=130 Identities=23% Similarity=0.407 Sum_probs=108.9
Q ss_pred cchhhhhCCccChhcccceeeeccEEEEECCCCCCCCcCCCCceeEEEeecceeEEEEeecCCC-C---ceeeeeeceec
Q psy11101 2 MDVARLKGFDGKITAQGKLLMRGPLYCTETSVASSSSSNSRGKELQVFLFEQSMIFSEAVGKKT-Q---FSVNKMSVEEK 77 (157)
Q Consensus 2 m~v~~l~g~dg~l~~qG~LL~qd~f~V~e~~~~~~~~~~~k~keR~VFLFEq~lifsk~~~~k~-~---~~~~~~~l~e~ 77 (157)
||+++|.||||||.+||++++||+|+||+++ .+.+||+||||||||..|||||.++..+ . |+..++.+.
T Consensus 809 mh~~~~~~~d~nl~~lg~~~~q~~f~vw~~k-----~l~rk~~erhlfl~ei~ivf~K~~~~s~~~~~~~~~~~l~~~-- 881 (1025)
T KOG4240|consen 809 MHLIALEGYDGNLDELGKLIMQDSFSVWKPK-----ALARKGMERHLFLFEISIVFCKRIEESSERIKYVSKKKLPMS-- 881 (1025)
T ss_pred cCHHHHhhhhhhHHHHHHHHhhccceeecHH-----HHhhhhHHHHHHHHHHHHHHHHHHHhccCCCcchhhccCCHH--
Confidence 9999999999999999999999999999886 2445999999999999999999987544 1 223333332
Q ss_pred CCCCcCCCCCCCCCCCCccEEEEEecCCCCCCceEEEEcCChHHHHHHHHHHHHHHHHHHHHHHhccCchH
Q psy11101 78 VPEELTPAGSGGSRGGLSAYFLLKSIDPKKPALTFLCQAPTEESRSEWLRCLGLILQTQRDFLKAIQSPIA 148 (157)
Q Consensus 78 ~~~~~~~~g~~~~~~gd~~kF~iw~~~~~~~~~~~~LqA~s~e~K~~Wv~~I~~iL~~Q~~~l~al~~Pi~ 148 (157)
.+|++++++||+|||+||.+.. ..+|+++|++.++|+.|+++||++++.|..+++. ++|..
T Consensus 882 ------e~gite~v~Gd~~kf~~~~g~~---~~~~~~~a~~~~~K~~W~~~ir~~~~~~~~~~~~-~~~~~ 942 (1025)
T KOG4240|consen 882 ------EVGITEHVEGDPCKFELWVGRT---ESVIDLKASNHETKQKWVKEIREVLQERTILLKG-KEQAQ 942 (1025)
T ss_pred ------hhcchhhcccCceEEEEeccCC---CcceeeecCCcchhhhhccchHHHHHHHHHHhhh-hhhhh
Confidence 3678888889999999999752 2399999999999999999999999999888776 66654
No 5
>cd01222 PH_clg Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain. Clg (common-site lymphoma/leukemia guanine nucleotide exchange factor) pleckstrin homology (PH) domain. Clg contains a RhoGEF (DH) domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.91 E-value=4.8e-24 Score=154.15 Aligned_cols=92 Identities=25% Similarity=0.435 Sum_probs=76.4
Q ss_pred ccceeeeccEEEEECCCCCCCCcCCCCceeEEEeecceeEEEEeecCCCCce----eeeeeceecCCCCcCCCCCCCCCC
Q psy11101 17 QGKLLMRGPLYCTETSVASSSSSNSRGKELQVFLFEQSMIFSEAVGKKTQFS----VNKMSVEEKVPEELTPAGSGGSRG 92 (157)
Q Consensus 17 qG~LL~qd~f~V~e~~~~~~~~~~~k~keR~VFLFEq~lifsk~~~~k~~~~----~~~~~l~e~~~~~~~~~g~~~~~~ 92 (157)
.|+||+||+|+++.. +++|||||||++|||||+++.+-.|+ +++|+++|+++
T Consensus 1 ~geLlleg~l~~~~~-----------~~eR~vFLFe~~ll~~K~~~~~y~~K~~i~~~~l~i~e~~~------------- 56 (97)
T cd01222 1 LGDLLLEGRFREHGG-----------GKPRLLFLFQTMLLIAKPRGDKYQFKAYIPCKNLMLVEHLP------------- 56 (97)
T ss_pred CCceeeeceEEeecC-----------CCceEEEEecccEEEEEecCCeeEEEEEEEecceEEecCCC-------------
Confidence 499999999998754 57899999999999999986543333 77777777665
Q ss_pred CCccEEEEEecCCCCCCceEEEEcCChHHHHHHHHHHHHHHH
Q psy11101 93 GLSAYFLLKSIDPKKPALTFLCQAPTEESRSEWLRCLGLILQ 134 (157)
Q Consensus 93 gd~~kF~iw~~~~~~~~~~~~LqA~s~e~K~~Wv~~I~~iL~ 134 (157)
+|||+|.|++.+ .+..+|+|||+|++.|+.|+..|+++|-
T Consensus 57 ~d~~~F~v~~~~--~p~~~~~l~A~s~e~K~~W~~~i~~~i~ 96 (97)
T cd01222 57 GEPLCFRVIPFD--DPKGALQLTARNREEKRIWTQQLKRAML 96 (97)
T ss_pred CCCcEEEEEecC--CCceEEEEEecCHHHHHHHHHHHHHHhh
Confidence 478999999875 3446999999999999999999999873
No 6
>cd01223 PH_Vav Vav pleckstrin homology (PH) domain. Vav pleckstrin homology (PH) domain. Vav acts as a guanosine nucleotide exchange factor(GEF) for Rho/Rac proteins. Mammalian Vav proteins consist of a calponin homology (CH) domain, an acidic region, a rho-GEF (DH)domain, a PH domain, a Zinc finger region and an SH2 domain, flanked by two SH3 domains. In invertebrates such as Drosophila and C.elegans, Vav is missing the N-terminal SH3 domain . PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.24 E-value=1.4e-10 Score=86.43 Aligned_cols=101 Identities=22% Similarity=0.429 Sum_probs=71.4
Q ss_pred cceeeeccEEEEECCCCCCCCcCCCCceeEEEeecceeEEEEeecCC---CCce------eeeeeceecCCCCcCCCCCC
Q psy11101 18 GKLLMRGPLYCTETSVASSSSSNSRGKELQVFLFEQSMIFSEAVGKK---TQFS------VNKMSVEEKVPEELTPAGSG 88 (157)
Q Consensus 18 G~LL~qd~f~V~e~~~~~~~~~~~k~keR~VFLFEq~lifsk~~~~k---~~~~------~~~~~l~e~~~~~~~~~g~~ 88 (157)
|+|+.-|..-|.+.. ..++++|||||||.+||+||+.... .+|+ +.++++++....| ..|
T Consensus 2 GR~~~DGelk~k~~~-------~~k~k~RyiFLFDk~lI~CK~~~~~~~~~~Y~~Ke~~~l~~~~I~~~~~~d--~~~-- 70 (116)
T cd01223 2 GRPLLDGEVRIKASE-------DQKTKLRYIFLFDKAVIVCKALGDNTGDMQYTYKDIHDLADYKIENNPSRD--TEG-- 70 (116)
T ss_pred CccccCCceEEeEec-------cCCCceeEEEEecceEEEEEecCCCCCCccEEhHHhhhhheeeeEecCccC--ccc--
Confidence 888999999988772 2678999999999999999987543 2454 7788888765432 101
Q ss_pred CCCCCCccEEEEEecCCCCCCceEEEEcCChHHHHHHHHHHHHHH
Q psy11101 89 GSRGGLSAYFLLKSIDPKKPALTFLCQAPTEESRSEWLRCLGLIL 133 (157)
Q Consensus 89 ~~~~gd~~kF~iw~~~~~~~~~~~~LqA~s~e~K~~Wv~~I~~iL 133 (157)
+...=...|.|-.++ + ...|++.|.|+|.|..|...+-..+
T Consensus 71 -~~~~~~~~f~L~~~~--~-~~~~~f~~Ktee~K~kWm~al~~a~ 111 (116)
T cd01223 71 -RDTRWKYGFYLAHKQ--G-KTGFTFYFKTEHLRKKWLKALEMAM 111 (116)
T ss_pred -CCcceEEEEEEEecC--C-CccEEEEeCCHHHHHHHHHHHHHHH
Confidence 000112356666653 2 3479999999999999998775544
No 7
>PF15411 PH_10: Pleckstrin homology domain
Probab=99.22 E-value=6.2e-11 Score=88.22 Aligned_cols=96 Identities=22% Similarity=0.299 Sum_probs=67.1
Q ss_pred hhcccceeeeccEEEEECCCCCCCCcCCCCceeEEEeecceeEEEEeecCCCC-----------ce---------eeeee
Q psy11101 14 ITAQGKLLMRGPLYCTETSVASSSSSNSRGKELQVFLFEQSMIFSEAVGKKTQ-----------FS---------VNKMS 73 (157)
Q Consensus 14 l~~qG~LL~qd~f~V~e~~~~~~~~~~~k~keR~VFLFEq~lifsk~~~~k~~-----------~~---------~~~~~ 73 (157)
|...|+||+||.|.|... ...+|.||||||++||+||++..++. .. +.--.
T Consensus 1 i~~fG~Lll~g~~~V~k~---------~~erE~~vYLFe~illc~kE~~~~~~~~~~~~~~~~~~~~~~L~LKGrI~i~~ 71 (116)
T PF15411_consen 1 IERFGELLLHGTLTVGKD---------DSEREYEVYLFEKILLCCKEVKPKKKKSKQISSKKKKKKKTKLQLKGRIYISN 71 (116)
T ss_pred CCcccceEEccEEEEEeC---------CcceeeeeeeeeeeEEEEecCccCccchhhcccccccCCCceEEEeeEEEEEe
Confidence 467899999999999855 24789999999999999998763221 11 11112
Q ss_pred ceecCCCCcCCCCCCCCCCCCccEEEEEecCCCCCCceEEEEcCChHHHHHHHHHH
Q psy11101 74 VEEKVPEELTPAGSGGSRGGLSAYFLLKSIDPKKPALTFLCQAPTEESRSEWLRCL 129 (157)
Q Consensus 74 l~e~~~~~~~~~g~~~~~~gd~~kF~iw~~~~~~~~~~~~LqA~s~e~K~~Wv~~I 129 (157)
+++.+ +....+.....||+++..+ ...|+|...+.|....|-++|
T Consensus 72 i~~v~----------~~s~~g~~~L~i~w~~d~e-~~~F~lrf~nee~l~~W~~~L 116 (116)
T PF15411_consen 72 ITEVS----------SSSKPGSYSLQISWKGDPE-LENFTLRFRNEEQLEQWRSAL 116 (116)
T ss_pred eeeee----------ccCCCCceEEEEEEcCCCC-CceEEEEeCCHHHHHHHHhhC
Confidence 22221 1122344678898854333 569999999999999998764
No 8
>cd01219 PH_FGD FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD (faciogenital dysplasia protein) pleckstrin homology (PH) domain. FGD has a RhoGEF (DH) domain, followed by a PH domain, a FYVE domain and a C-terminal PH domain. FGD is a guanine nucleotide exchange factor that activates the Rho GTPase Cdc42. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.19 E-value=4.1e-10 Score=81.13 Aligned_cols=77 Identities=21% Similarity=0.336 Sum_probs=58.5
Q ss_pred CCCceeEEEeecceeEEEEeecC--CCCce------eeeeeceecCCCCcCCCCCCCCCCCCccEEEEEecCCCCCCceE
Q psy11101 41 SRGKELQVFLFEQSMIFSEAVGK--KTQFS------VNKMSVEEKVPEELTPAGSGGSRGGLSAYFLLKSIDPKKPALTF 112 (157)
Q Consensus 41 ~k~keR~VFLFEq~lifsk~~~~--k~~~~------~~~~~l~e~~~~~~~~~g~~~~~~gd~~kF~iw~~~~~~~~~~~ 112 (157)
++.++||+|||.+++|+|++... +..|. ++.|.+.+..+ ...+..|.|..+. .+|
T Consensus 16 ~~~k~RyffLFnd~Ll~~~~~~~~~~~~y~~~~~i~l~~~~v~~~~~------------~~~~~~F~I~~~~-----rsf 78 (101)
T cd01219 16 EKTEERYLFLFNDLLLYCVPRKMIGGSKFKVRARIDVSGMQVCEGDN------------LERPHSFLVSGKQ-----RCL 78 (101)
T ss_pred CCceeEEEEEeCCEEEEEEcccccCCCcEEEEEEEecccEEEEeCCC------------CCcCceEEEecCC-----cEE
Confidence 56789999999999999997532 33454 66666665421 1246789996643 499
Q ss_pred EEEcCChHHHHHHHHHHHHHHH
Q psy11101 113 LCQAPTEESRSEWLRCLGLILQ 134 (157)
Q Consensus 113 ~LqA~s~e~K~~Wv~~I~~iL~ 134 (157)
+++|.|++.|..|+..|..++.
T Consensus 79 ~l~A~s~eEk~~W~~ai~~~i~ 100 (101)
T cd01219 79 ELQARTQKEKNDWVQAIFSIID 100 (101)
T ss_pred EEEcCCHHHHHHHHHHHHHHhh
Confidence 9999999999999999998874
No 9
>cd01261 PH_SOS Son of Sevenless (SOS) Pleckstrin homology (PH) domain. Son of Sevenless (SOS) Pleckstrin homology (PH) domain. SOS is a Ras guanine nucleotide exchange factor. It has a RhoGEF (DbH) domain, a PH domain, and a RasGEF domain. The SOS PH domain can bind to inositol 1,4,5-triphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.15 E-value=7.7e-10 Score=81.97 Aligned_cols=93 Identities=19% Similarity=0.369 Sum_probs=66.2
Q ss_pred ceeeeccEEEEECCCCCCCCcCCCCceeEEEeecceeEEEEeecCCC--------Cce------eeeeeceecCCCCcCC
Q psy11101 19 KLLMRGPLYCTETSVASSSSSNSRGKELQVFLFEQSMIFSEAVGKKT--------QFS------VNKMSVEEKVPEELTP 84 (157)
Q Consensus 19 ~LL~qd~f~V~e~~~~~~~~~~~k~keR~VFLFEq~lifsk~~~~k~--------~~~------~~~~~l~e~~~~~~~~ 84 (157)
+||.-|.++....+ .++.++||+|||..++|+||+...+. .|. +.++.+.+..++
T Consensus 3 elI~EG~L~ki~~~-------~~~~q~R~~FLFd~~Li~CK~~~~~~~~~g~~~~~y~~k~~~~l~~~~V~d~~d~---- 71 (112)
T cd01261 3 EFIMEGTLTRVGPS-------KKAKHERHVFLFDGLMVLCKSNHGQPRLPGASSAEYRLKEKFFMRKVDINDKPDS---- 71 (112)
T ss_pred cccccCcEEEEecc-------cCCcceEEEEEecCeEEEEEeccCcccccccccceEEEEEEEeeeeeEEEEcCCC----
Confidence 46666777644331 24677999999999999999865421 233 566666655442
Q ss_pred CCCCCCCCCCccEEEEEecCCCCCCceEEEEcCChHHHHHHHHHHHHHH
Q psy11101 85 AGSGGSRGGLSAYFLLKSIDPKKPALTFLCQAPTEESRSEWLRCLGLIL 133 (157)
Q Consensus 85 ~g~~~~~~gd~~kF~iw~~~~~~~~~~~~LqA~s~e~K~~Wv~~I~~iL 133 (157)
+..+..|.|.+++ ..+|+++|.|++.|+.|+..|-.++
T Consensus 72 -------~~~knaF~I~~~~----~~s~~l~Akt~eeK~~Wm~~l~~~~ 109 (112)
T cd01261 72 -------SEYKNAFEIILKD----GNSVIFSAKNAEEKNNWMAALISVQ 109 (112)
T ss_pred -------cccCceEEEEcCC----CCEEEEEECCHHHHHHHHHHHHHHh
Confidence 1236789998763 2389999999999999999887664
No 10
>cd01224 PH_Collybistin Collybistin pleckstrin homology (PH) domain. Collybistin pleckstrin homology (PH) domain. Collybistin is GEF which induces submembrane clustering of the receptor-associated peripheral membrane protein gephyrin. It consists of an SH3 domain, followed by a RhoGEF(dbH) and PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=99.12 E-value=1.3e-09 Score=80.45 Aligned_cols=97 Identities=13% Similarity=0.294 Sum_probs=70.3
Q ss_pred ceeeeccEEEEECCCCCCCCcCCCCceeEEEeecceeEEEEeec-CCCCce------eeeeeceecCCCCcCCCCCCCCC
Q psy11101 19 KLLMRGPLYCTETSVASSSSSNSRGKELQVFLFEQSMIFSEAVG-KKTQFS------VNKMSVEEKVPEELTPAGSGGSR 91 (157)
Q Consensus 19 ~LL~qd~f~V~e~~~~~~~~~~~k~keR~VFLFEq~lifsk~~~-~k~~~~------~~~~~l~e~~~~~~~~~g~~~~~ 91 (157)
+|+++|+..+.... ..+.++||+|||...+|+||+.- +++.|. ++.+.+.+..+++-+..|.
T Consensus 1 eli~~Gel~~~s~~-------~g~~q~R~~FLFD~~LI~CKkd~~r~~~~~yKgri~l~~~~I~d~~Dg~~~~~~~---- 69 (109)
T cd01224 1 ELFLQGEATRQKQN-------KGWNSSRVLFLFDHQMVLCKKDLIRRDHLYYKGRIDLDRCEVVNIRDGKMFSSGH---- 69 (109)
T ss_pred CceEeeeEEEEecc-------cCCcccEEEEEecceEEEEecccccCCcEEEEEEEEcccEEEEECCCCccccCCc----
Confidence 58899999987642 13567999999999999999853 344443 7888888877653111111
Q ss_pred CCCccEEEEEecCCCCCCceEEEEcCChHHHHHHHHHHH
Q psy11101 92 GGLSAYFLLKSIDPKKPALTFLCQAPTEESRSEWLRCLG 130 (157)
Q Consensus 92 ~gd~~kF~iw~~~~~~~~~~~~LqA~s~e~K~~Wv~~I~ 130 (157)
.-...|.|..++ ....|++-|.|+|.|+.|+..+.
T Consensus 70 -~~knafkl~~~~---~~~~~~f~~Kt~e~K~~Wm~a~~ 104 (109)
T cd01224 70 -TIKNSLKIYSES---TDEWYLFSFKSAERKHRWLSAFA 104 (109)
T ss_pred -eeEEEEEEEEcC---CCeEEEEEECCHHHHHHHHHHHH
Confidence 123578888864 24589999999999999998774
No 11
>cd01220 PH_CDEP Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. Chondrocyte-derived ezrin-like domain containing protein (CDEP) Pleckstrin homology (PH) domain. CDEP consists of a Ferm domain, a rhoGEF (DH) domain followed by two PH domains. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.05 E-value=3.7e-09 Score=76.44 Aligned_cols=91 Identities=19% Similarity=0.303 Sum_probs=65.1
Q ss_pred ceeeeccEEEEECCCCCCCCcCCCCceeEEEeecceeEEEEeecC-CCCce------eeeeeceecCCCCcCCCCCCCCC
Q psy11101 19 KLLMRGPLYCTETSVASSSSSNSRGKELQVFLFEQSMIFSEAVGK-KTQFS------VNKMSVEEKVPEELTPAGSGGSR 91 (157)
Q Consensus 19 ~LL~qd~f~V~e~~~~~~~~~~~k~keR~VFLFEq~lifsk~~~~-k~~~~------~~~~~l~e~~~~~~~~~g~~~~~ 91 (157)
++|.+|.++=-.. +..++|+.|||-+++|+|.+... +..|. +..|.+++..++
T Consensus 1 ~~ikEG~L~K~~~---------k~~~~R~~FLFnD~LlY~~~~~~~~~~y~~~~~i~L~~~~V~~~~~~----------- 60 (99)
T cd01220 1 EFIRQGCLLKLSK---------KGLQQRMFFLFSDLLLYTSKSPTDQNSFRILGHLPLRGMLTEESEHE----------- 60 (99)
T ss_pred CeeeEEEEEEEeC---------CCCceEEEEEccceEEEEEeecCCCceEEEEEEEEcCceEEeeccCC-----------
Confidence 4677777763222 34578999999999999998643 33454 555666553321
Q ss_pred CCCccEEEEEecCCCCCCceEEEEcCChHHHHHHHHHHHHHHH
Q psy11101 92 GGLSAYFLLKSIDPKKPALTFLCQAPTEESRSEWLRCLGLILQ 134 (157)
Q Consensus 92 ~gd~~kF~iw~~~~~~~~~~~~LqA~s~e~K~~Wv~~I~~iL~ 134 (157)
.+.+..|.|.+. ..+|++.|+|++.|+.|+.+|++.++
T Consensus 61 ~~~~~~F~I~~~-----~ks~~l~A~s~~Ek~~Wi~~i~~aI~ 98 (99)
T cd01220 61 WGVPHCFTIFGG-----QCAITVAASTRAEKEKWLADLSKAIA 98 (99)
T ss_pred cCCceeEEEEcC-----CeEEEEECCCHHHHHHHHHHHHHHhh
Confidence 134578999854 24899999999999999999998763
No 12
>cd01218 PH_phafin2 Phafin2 Pleckstrin Homology (PH) domain. Phafin2 Pleckstrin Homology (PH) domain. Phafin contains a PH domain and a FYVE domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=99.01 E-value=7.6e-09 Score=75.67 Aligned_cols=79 Identities=22% Similarity=0.402 Sum_probs=60.0
Q ss_pred CCCceeEEEeecceeEEEEeecCCCCce------eeeeeceecCCCCcCCCCCCCCCCCCccEEEEEecCCCCCCceEEE
Q psy11101 41 SRGKELQVFLFEQSMIFSEAVGKKTQFS------VNKMSVEEKVPEELTPAGSGGSRGGLSAYFLLKSIDPKKPALTFLC 114 (157)
Q Consensus 41 ~k~keR~VFLFEq~lifsk~~~~k~~~~------~~~~~l~e~~~~~~~~~g~~~~~~gd~~kF~iw~~~~~~~~~~~~L 114 (157)
+++++|+.|||.+++|+++.+-.+..|. +..|.+.+..++ ++-+..|.|.+. ..+|++
T Consensus 16 k~~~~R~ffLFnD~LvY~~~~~~~~~~~~~~~i~L~~~~v~~~~d~-----------~~~~n~f~I~~~-----~kSf~v 79 (104)
T cd01218 16 KKPKQRQFFLFNDILVYGNIVISKKKYNKQHILPLEGVQVESIEDD-----------GIERNGWIIKTP-----TKSFAV 79 (104)
T ss_pred CCCceEEEEEecCEEEEEEeecCCceeeEeeEEEccceEEEecCCc-----------ccccceEEEecC-----CeEEEE
Confidence 5678899999999999998865555564 566666654432 122468988774 249999
Q ss_pred EcCChHHHHHHHHHHHHHHHH
Q psy11101 115 QAPTEESRSEWLRCLGLILQT 135 (157)
Q Consensus 115 qA~s~e~K~~Wv~~I~~iL~~ 135 (157)
+|+|++.|..|+.+|.+....
T Consensus 80 ~A~s~~eK~eWl~~i~~ai~~ 100 (104)
T cd01218 80 YAATETEKREWMLHINKCVTD 100 (104)
T ss_pred EcCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999998754
No 13
>cd01221 PH_ephexin Ephexin Pleckstrin homology (PH) domain. Ephexin Pleckstrin homology (PH) domain. Ephexin contains a RhoGEF (DH) followed by a PH domain and an SH3 domain. The ephexin PH domain is believed to act with the DH domain in mediating protein-protein interactions with the Eph receptor. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=98.60 E-value=1.1e-06 Score=66.45 Aligned_cols=106 Identities=22% Similarity=0.324 Sum_probs=67.7
Q ss_pred eeeeccEEEEECCCCCC-CCcCCCCceeEEEeecceeEEEEeecCCCCce------eeeeeceecCCCCcCCCCCCC--C
Q psy11101 20 LLMRGPLYCTETSVASS-SSSNSRGKELQVFLFEQSMIFSEAVGKKTQFS------VNKMSVEEKVPEELTPAGSGG--S 90 (157)
Q Consensus 20 LL~qd~f~V~e~~~~~~-~~~~~k~keR~VFLFEq~lifsk~~~~k~~~~------~~~~~l~e~~~~~~~~~g~~~--~ 90 (157)
|+.||++++.+...... -+.+...+.+|+|||-+++|+||+.. +..|. .+.+.+++.... +.++.+ .
T Consensus 3 LvK~GEL~~l~~~~~~~~~~~k~~~~~vylfLFnDlLl~tkkK~-~~~f~V~dy~~r~~l~V~~~e~~---~~~~~~~~~ 78 (125)
T cd01221 3 LVKRGELTQLEERGSSNILRKKLKARTIYLFLFNDLLLITKKKL-GSTFVVFDYAPRSFLRVEKIEPD---NQKIPLGSN 78 (125)
T ss_pred eEEEeeEEEEeccCCcchhcccccCCcEEEEEecceEEEEEecC-CCeEEEEeeccccceEEeecccc---ccccccccc
Confidence 67788888754421110 01223455899999999999999874 45565 355555553322 112111 1
Q ss_pred CCCCccEEEEEe-cCCCCCCceEEEEcCChHHHHHHHHHH
Q psy11101 91 RGGLSAYFLLKS-IDPKKPALTFLCQAPTEESRSEWLRCL 129 (157)
Q Consensus 91 ~~gd~~kF~iw~-~~~~~~~~~~~LqA~s~e~K~~Wv~~I 129 (157)
..+.+.-|.|.. .+..+....++|+|+|.+.|..|+..|
T Consensus 79 ~~~~~~~F~ltLl~N~~gk~~el~L~a~S~sdr~rWi~Al 118 (125)
T cd01221 79 LVGRPNLFLLTLLRNADDKQAELLLSADSQSDRERWLSAL 118 (125)
T ss_pred ccCCCceEEEEeeccCCCCEEEEEEECCCHHHHHHHHHhc
Confidence 123567898874 444456678999999999999998866
No 14
>PF15405 PH_5: Pleckstrin homology domain; PDB: 2Z0Q_A.
Probab=98.39 E-value=1.7e-06 Score=65.83 Aligned_cols=87 Identities=13% Similarity=0.282 Sum_probs=50.3
Q ss_pred ceeEEEeecceeEEEEeecCC--CCceee-------eeeceecCCCCcCCCC--------------------CCCCCCCC
Q psy11101 44 KELQVFLFEQSMIFSEAVGKK--TQFSVN-------KMSVEEKVPEELTPAG--------------------SGGSRGGL 94 (157)
Q Consensus 44 keR~VFLFEq~lifsk~~~~k--~~~~~~-------~~~l~e~~~~~~~~~g--------------------~~~~~~gd 94 (157)
-+-|||||++++|++|++..+ ..|+|+ -+.+++..+.. ...+ ...+.+.+
T Consensus 18 ~di~~~LFDh~Lll~K~k~~~k~e~ykV~r~PIPLeLL~l~~~~d~~-~~~~~~~r~s~s~~~~~~~~~~~~~~~~~~~~ 96 (135)
T PF15405_consen 18 VDIHVYLFDHYLLLTKPKKVNKREQYKVYRRPIPLELLVLESMDDPP-PQRSIAKRPSSSLISSSSSNSNSPSNPNSSDS 96 (135)
T ss_dssp -EEEEEEESSEEEEEEEEEETTEEEEEESS--EEGGG-EEEE--TTT-S---------S-------SHHHH--------T
T ss_pred ceeEEEeeccEEEEEEEEecCCeEEEEEEECCcCHHHeeeecccCCC-cccCcccccccCccCCccCCCCccceeeeccC
Confidence 389999999999999987533 356522 24444332221 0001 11122445
Q ss_pred ccEEEEEecCCCCCCceEEEEcCChHHHHHHHHHHHH
Q psy11101 95 SAYFLLKSIDPKKPALTFLCQAPTEESRSEWLRCLGL 131 (157)
Q Consensus 95 ~~kF~iw~~~~~~~~~~~~LqA~s~e~K~~Wv~~I~~ 131 (157)
...|.|.++...+....|+|.|+|...|+.|+..|.+
T Consensus 97 ~~~yp~~~~hlG~~~~~~TLyA~s~~~R~~W~e~I~~ 133 (135)
T PF15405_consen 97 KSLYPFTFRHLGRKGYSYTLYASSAQARQKWLEKIEE 133 (135)
T ss_dssp SSEEEEEE---GGG-EEEEEE-SSHHHHHHHHHHHHH
T ss_pred CCccCEEEEEcCCCceEEEEEeCCHHHHHHHHHHHHh
Confidence 6688888765444455699999999999999999865
No 15
>cd01228 PH_BCR-related BCR (breakpoint cluster region)-related pleckstrin homology (PH) domain. BCR (breakpoint cluster region)-related pleckstrin homology (PH) domain. The BCR-related protein has a RhoGEF(DH) domain followed by a PH domain, a C2 domain and a RhoGAP domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinases, tyrosine kinases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=98.18 E-value=1.3e-05 Score=57.82 Aligned_cols=75 Identities=16% Similarity=0.251 Sum_probs=51.9
Q ss_pred CCCceeEEEeecceeEEEEeec---CC-CCce-eeeeeceecCCCCcCCCCCCCCCCCCccEEEEEecCCCCCCceEEEE
Q psy11101 41 SRGKELQVFLFEQSMIFSEAVG---KK-TQFS-VNKMSVEEKVPEELTPAGSGGSRGGLSAYFLLKSIDPKKPALTFLCQ 115 (157)
Q Consensus 41 ~k~keR~VFLFEq~lifsk~~~---~k-~~~~-~~~~~l~e~~~~~~~~~g~~~~~~gd~~kF~iw~~~~~~~~~~~~Lq 115 (157)
.+.|.||+|||-.++|.++.+. .+ ..|. .-.+.|++..-.+ . -|.+- +.+.-+|++-
T Consensus 15 ~~rK~R~~FLFnDlLvc~~ik~~~~~k~~kY~~~w~IPL~dl~~~~------------~--~~~~~----~~~~KSf~~~ 76 (96)
T cd01228 15 GSRKLRHLFLFTDVLLCAKLKKTSRGKHQQYDCKWYIPLADLSFPS------------E--PFRIH----NKNGKSYTFL 76 (96)
T ss_pred CCCcceEEEeeccEEEEEEeeeccCccccccceeEEEEhHHheecc------------h--hhhcc----ccCCceEEEE
Confidence 4568999999999999999763 22 3564 3445555532210 1 14443 2345699999
Q ss_pred cCChHHHHHHHHHHHHHH
Q psy11101 116 APTEESRSEWLRCLGLIL 133 (157)
Q Consensus 116 A~s~e~K~~Wv~~I~~iL 133 (157)
|+|.+.|.+|...|.++.
T Consensus 77 asS~~Er~eW~~hI~~~~ 94 (96)
T cd01228 77 LSSDYERSEWRESIQKLQ 94 (96)
T ss_pred ecCHHHHHHHHHHHHHHh
Confidence 999999999999998864
No 16
>smart00233 PH Pleckstrin homology domain. Domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids.
Probab=98.12 E-value=8.4e-05 Score=49.36 Aligned_cols=80 Identities=23% Similarity=0.396 Sum_probs=56.9
Q ss_pred CCCceeEEEeecceeEEEEeecCCCC------ceeeeeeceecCCCCcCCCCCCCCCCCCccEEEEEecCCCCCCceEEE
Q psy11101 41 SRGKELQVFLFEQSMIFSEAVGKKTQ------FSVNKMSVEEKVPEELTPAGSGGSRGGLSAYFLLKSIDPKKPALTFLC 114 (157)
Q Consensus 41 ~k~keR~VFLFEq~lifsk~~~~k~~------~~~~~~~l~e~~~~~~~~~g~~~~~~gd~~kF~iw~~~~~~~~~~~~L 114 (157)
.+.++|+++|++..+.+++....... +.+....+......+ ..+.+..|.|...+. .+|++
T Consensus 16 ~~~~~~~~~L~~~~l~~~~~~~~~~~~~~~~~i~l~~~~v~~~~~~~---------~~~~~~~f~l~~~~~----~~~~f 82 (102)
T smart00233 16 KSWKKRYFVLFNSTLLYYKSEKAKKDYKPKGSIDLSGITVREAPDPD---------SAKKPHCFEIKTADR----RSYLL 82 (102)
T ss_pred CCceEEEEEEECCEEEEEeCCCccccCCCceEEECCcCEEEeCCCCc---------cCCCceEEEEEecCC----ceEEE
Confidence 56789999999999999987654321 224444444433210 023457899988641 58999
Q ss_pred EcCChHHHHHHHHHHHHHH
Q psy11101 115 QAPTEESRSEWLRCLGLIL 133 (157)
Q Consensus 115 qA~s~e~K~~Wv~~I~~iL 133 (157)
+|+|++.++.|+..|+.++
T Consensus 83 ~~~s~~~~~~W~~~i~~~~ 101 (102)
T smart00233 83 QAESEEEREEWVDALRKAI 101 (102)
T ss_pred EcCCHHHHHHHHHHHHHhh
Confidence 9999999999999998865
No 17
>KOG3518|consensus
Probab=97.96 E-value=1.6e-06 Score=75.39 Aligned_cols=105 Identities=16% Similarity=0.278 Sum_probs=76.6
Q ss_pred hhhhCCcc------ChhcccceeeeccEEEEECCCCCCCCcCCCCceeEEEeecceeEEEEeecCCCCce----eeeeec
Q psy11101 5 ARLKGFDG------KITAQGKLLMRGPLYCTETSVASSSSSNSRGKELQVFLFEQSMIFSEAVGKKTQFS----VNKMSV 74 (157)
Q Consensus 5 ~~l~g~dg------~l~~qG~LL~qd~f~V~e~~~~~~~~~~~k~keR~VFLFEq~lifsk~~~~k~~~~----~~~~~l 74 (157)
+.|+.|.| +|++-|+||+-++|-+.- -..+|-+|||+++++++|..+..-.|+ -..+-|
T Consensus 319 s~lqkwkadeiqi~dlsaygdllleatfr~ag-----------ak~~rllflfdellli~kkr~anf~~k~~ilc~nlml 387 (521)
T KOG3518|consen 319 SLLQKWKADEIQIPDLSAYGDLLLEATFRIAG-----------AKNERLLFLFDELLLITKKRDANFTCKAHILCGNLML 387 (521)
T ss_pred HHHHhcccccccCCchhhhHHHHHHHHHHHhc-----------ccccchHHHHHhHHhheeecCCceeeehhhhccchhh
Confidence 45677877 899999999999996432 235899999999999999876544443 122223
Q ss_pred eecCCCCcCCCCCCCCCCCCccEEEEEe-cCCCCCCceEEEEcCChHHHHHHHHHHHHHHHH
Q psy11101 75 EEKVPEELTPAGSGGSRGGLSAYFLLKS-IDPKKPALTFLCQAPTEESRSEWLRCLGLILQT 135 (157)
Q Consensus 75 ~e~~~~~~~~~g~~~~~~gd~~kF~iw~-~~~~~~~~~~~LqA~s~e~K~~Wv~~I~~iL~~ 135 (157)
.|-+ .+..|..|.+.+ .+|+ --|+.+|.|.+-|..|+-++++++..
T Consensus 388 ne~i------------cpeeplsfqv~~fdnpk---aq~~fma~sme~kr~wm~elkrlild 434 (521)
T KOG3518|consen 388 NEVI------------CPEEPLSFQVFHFDNPK---AQHTFMAKSMEDKRLWMLELKRLILD 434 (521)
T ss_pred heec------------cCCCCceeEEEecCCcc---hhhhhhhhhhHHHHHHHHHHHHHHHh
Confidence 2322 123689998876 5544 36888999999999999999988753
No 18
>cd01226 PH_exo84 Exocyst complex 84-kDa subunit Pleckstrin Homology (PH) domain. Exocyst complex 84-kDa subunit Pleckstrin Homology (PH) domain. Exo84 is a subunit of the exocyt complex, which is important in intracellular trafficking. In metazoa, Exo84 has a PH domain towards its N-terminus. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=97.95 E-value=0.00011 Score=53.59 Aligned_cols=77 Identities=13% Similarity=0.215 Sum_probs=54.1
Q ss_pred CCCCceeE-EEeecceeEEEEeecCCCCce------eeeeeceecCCCCcCCCCCCCCCCCCccEEEEEecCCCCCCceE
Q psy11101 40 NSRGKELQ-VFLFEQSMIFSEAVGKKTQFS------VNKMSVEEKVPEELTPAGSGGSRGGLSAYFLLKSIDPKKPALTF 112 (157)
Q Consensus 40 ~~k~keR~-VFLFEq~lifsk~~~~k~~~~------~~~~~l~e~~~~~~~~~g~~~~~~gd~~kF~iw~~~~~~~~~~~ 112 (157)
..++.+|. .|||-.++|.+....++ .|. ++.+.+.+..+. ++-+..|-|.... .++
T Consensus 15 ~~kp~~rv~~FLfND~Lvva~~~~~~-ky~~~~~~~L~~i~V~ni~D~-----------~~~kNafki~t~~-----~s~ 77 (100)
T cd01226 15 TKKPVQRVMLFLLNDRLIVGNINAAG-KYVMESTYSLNSVAVVNVKDR-----------ENAKKVLKLLIFP-----ESR 77 (100)
T ss_pred hCCccceEEEEEeccEEEEEEecccc-eEEEEEEEehHHeEEEecCCC-----------cCcCceEEEEeCC-----ccE
Confidence 35666655 99999999999887543 343 555555554332 1234578776532 479
Q ss_pred EEEcCChHHHHHHHHHHHHHH
Q psy11101 113 LCQAPTEESRSEWLRCLGLIL 133 (157)
Q Consensus 113 ~LqA~s~e~K~~Wv~~I~~iL 133 (157)
++||.|++.|..|+..|.+..
T Consensus 78 i~qaes~~~K~eWl~~le~a~ 98 (100)
T cd01226 78 IYQCESARIKTEWFEELEQAK 98 (100)
T ss_pred EEEeCCHHHHHHHHHHHHHHh
Confidence 999999999999999998753
No 19
>PF00169 PH: PH domain; InterPro: IPR001849 The pleckstrin homology (PH) domain is a domain of about 100 residues that occurs in a wide range of proteins involved in intracellular signalling or as constituents of the cytoskeleton [, , , , , , ]. The pleckstrin homology domain commonly found in eukaryotic signalling proteins. The domain family possesses multiple functions including the abilities to bind inositol phosphates, and various proteins. PH domains have been found to possess inserted domains (such as in PLC gamma, syntrophins) and to be inserted within other domains. Mutations in Brutons tyrosine kinase (Btk) within its PH domain cause X-linked agammaglobulinaemia (XLA) in patients. Point mutations cluster into the positively charged end of the molecule around the predicted binding site for phosphatidylinositol lipids. The 3D structure of several PH domains has been determined []. All known cases have a common structure consisting of two perpendicular anti-parallel beta sheets, followed by a C-terminal amphipathic helix. The loops connecting the beta-strands differ greatly in length, making the PH domain relatively difficult to detect. There are no totally invariant residues within the PH domain. Proteins reported to contain one more PH domains belong to the following families: Pleckstrin, the protein where this domain was first detected, is the major substrate of protein kinase C in platelets. Pleckstrin is one of the rare proteins to contains two PH domains. Ser/Thr protein kinases such as the Akt/Rac family, the beta-adrenergic receptor kinases, the mu isoform of PKC and the trypanosomal NrkA family. Tyrosine protein kinases belonging to the Btk/Itk/Tec subfamily. Insulin Receptor Substrate 1 (IRS-1). Regulators of small G-proteins like guanine nucleotide releasing factor GNRP (Ras-GRF) (which contains 2 PH domains), guanine nucleotide exchange proteins like vav, dbl, SoS and Saccharomyces cerevisiae CDC24, GTPase activating proteins like rasGAP and BEM2/IPL2, and the human break point cluster protein bcr. Cytoskeletal proteins such as dynamin (see IPR001401 from INTERPRO), Caenorhabditis elegans kinesin-like protein unc-104 (see IPR001752 from INTERPRO), spectrin beta-chain, syntrophin (2 PH domains) and S. cerevisiae nuclear migration protein NUM1. Mammalian phosphatidylinositol-specific phospholipase C (PI-PLC) (see IPR000909 from INTERPRO) isoforms gamma and delta. Isoform gamma contains two PH domains, the second one is split into two parts separated by about 400 residues. Oxysterol binding proteins OSBP, S. cerevisiae OSH1 and YHR073w. Mouse protein citron, a putative rho/rac effector that binds to the GTP-bound forms of rho and rac. Several S. cerevisiae proteins involved in cell cycle regulation and bud formation like BEM2, BEM3, BUD4 and the BEM1-binding proteins BOI2 (BEB1) and BOI1 (BOB1). C. elegans protein MIG-10. C. elegans hypothetical proteins C04D8.1, K06H7.4 and ZK632.12. S. cerevisiae hypothetical proteins YBR129c and YHR155w. ; GO: 0005515 protein binding; PDB: 1DYN_B 2DYN_B 3SNH_A 3ZYS_C 1X05_A 2I5F_A 1ZM0_B 1XX0_A 2I5C_C 3A8P_D ....
Probab=97.92 E-value=0.00036 Score=47.28 Aligned_cols=96 Identities=16% Similarity=0.263 Sum_probs=65.4
Q ss_pred eeeccEEEEECCCCCCCCcCCCCceeEEEeecceeEEEEeecCC---C---CceeeeeeceecCCCCcCCCCCCCCCCCC
Q psy11101 21 LMRGPLYCTETSVASSSSSNSRGKELQVFLFEQSMIFSEAVGKK---T---QFSVNKMSVEEKVPEELTPAGSGGSRGGL 94 (157)
Q Consensus 21 L~qd~f~V~e~~~~~~~~~~~k~keR~VFLFEq~lifsk~~~~k---~---~~~~~~~~l~e~~~~~~~~~g~~~~~~gd 94 (157)
++.|-+..... ..++-+.|+++|+...|++.+..... . .+.++.+.+.+....+ . ......
T Consensus 2 ~~~G~L~~~~~-------~~~~wk~r~~vL~~~~L~~~~~~~~~~~~~~~~~i~l~~~~v~~~~~~~--~----~~~~~~ 68 (104)
T PF00169_consen 2 IKEGWLLKKSS-------SRKKWKKRYFVLRDSYLLYYKSSKDKSDSKPKGSIPLDDCTVRPDPSSD--F----LSNKKR 68 (104)
T ss_dssp EEEEEEEEEES-------SSSSEEEEEEEEETTEEEEESSTTTTTESSESEEEEGTTEEEEEETSST--S----TSTSSS
T ss_pred EEEEEEEEECC-------CCCCeEEEEEEEECCEEEEEecCccccceeeeEEEEecCceEEEcCccc--c----ccccCC
Confidence 34555555442 22566799999999999999887631 1 1225555665554321 0 122345
Q ss_pred ccEEEEEecCCCCCCceEEEEcCChHHHHHHHHHHHHHH
Q psy11101 95 SAYFLLKSIDPKKPALTFLCQAPTEESRSEWLRCLGLIL 133 (157)
Q Consensus 95 ~~kF~iw~~~~~~~~~~~~LqA~s~e~K~~Wv~~I~~iL 133 (157)
+..|.|...+. .+|.+.|.|++.+..|+..|+.++
T Consensus 69 ~~~f~i~~~~~----~~~~~~~~s~~~~~~W~~~i~~~~ 103 (104)
T PF00169_consen 69 KNCFEITTPNG----KSYLFSAESEEERKRWIQAIQKAI 103 (104)
T ss_dssp SSEEEEEETTS----EEEEEEESSHHHHHHHHHHHHHHH
T ss_pred CcEEEEEeCCC----cEEEEEcCCHHHHHHHHHHHHHHh
Confidence 67999998742 599999999999999999998864
No 20
>cd00821 PH Pleckstrin homology (PH) domain. Pleckstrin homology (PH) domain. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=97.40 E-value=0.002 Score=42.24 Aligned_cols=76 Identities=25% Similarity=0.411 Sum_probs=53.5
Q ss_pred CCCceeEEEeecceeEEEEeecCC---C---CceeeeeeceecCCCCcCCCCCCCCCCCCccEEEEEecCCCCCCceEEE
Q psy11101 41 SRGKELQVFLFEQSMIFSEAVGKK---T---QFSVNKMSVEEKVPEELTPAGSGGSRGGLSAYFLLKSIDPKKPALTFLC 114 (157)
Q Consensus 41 ~k~keR~VFLFEq~lifsk~~~~k---~---~~~~~~~~l~e~~~~~~~~~g~~~~~~gd~~kF~iw~~~~~~~~~~~~L 114 (157)
...+.|+++|+...+.+++..... . .+.+....+...... .+.+..|.|..... ..|.+
T Consensus 14 ~~w~~~~~~L~~~~l~~~~~~~~~~~~~~~~~i~l~~~~v~~~~~~-----------~~~~~~f~i~~~~~----~~~~~ 78 (96)
T cd00821 14 KGWKRRWFVLFNDLLLYYKKKSSKKSYKPKGSIPLSGAEVEESPDD-----------SGRKNCFEIRTPDG----RSYLL 78 (96)
T ss_pred CCccEEEEEEECCEEEEEECCCCCcCCCCcceEEcCCCEEEECCCc-----------CCCCcEEEEecCCC----cEEEE
Confidence 345689999999999988876542 1 122444444443321 12467999988642 58999
Q ss_pred EcCChHHHHHHHHHHHH
Q psy11101 115 QAPTEESRSEWLRCLGL 131 (157)
Q Consensus 115 qA~s~e~K~~Wv~~I~~ 131 (157)
+|.|.+.++.|+..|++
T Consensus 79 ~~~s~~~~~~W~~~l~~ 95 (96)
T cd00821 79 QAESEEEREEWIEALQS 95 (96)
T ss_pred EeCCHHHHHHHHHHHhc
Confidence 99999999999999875
No 21
>cd01255 PH_TIAM TIAM Pleckstrin homology (PH) domain. TIAM Pleckstrin homology (PH) domain. TIAM (T-cell invasion and metastasis) is a guanine nucleotide exchange factor specific for RAC1. It consists of an N-terminal PH domain followed by Raf-like ras binding domain(RDB), a PDZ domain, a RhoGEF (DH) domain and a PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. This subfamily contains the alignment of the PH domain that follows the DH domain.
Probab=97.32 E-value=0.0031 Score=48.98 Aligned_cols=107 Identities=22% Similarity=0.319 Sum_probs=69.8
Q ss_pred ccceeeeccEEEEECCCCCCCCcCCCCceeEEEeecceeE-EEEeecC-C-C--------------C--ce----eeeee
Q psy11101 17 QGKLLMRGPLYCTETSVASSSSSNSRGKELQVFLFEQSMI-FSEAVGK-K-T--------------Q--FS----VNKMS 73 (157)
Q Consensus 17 qG~LL~qd~f~V~e~~~~~~~~~~~k~keR~VFLFEq~li-fsk~~~~-k-~--------------~--~~----~~~~~ 73 (157)
-|+||+|++-. |-+. ..+.+..+|.-+.-+|.|.-+|| +||...+ | + . |. ++.+.
T Consensus 24 mgdLL~h~~v~-WLNp-~~slgk~kKe~e~~~FVFK~AVVlv~ke~~K~KkKl~~~~r~~~~~e~dp~rfr~miP~~alQ 101 (160)
T cd01255 24 PGDLLYHGGVE-WLNP-SDSLGKIKKELELMCFVFKSAVVLVYKERLKQKKKLMGVSRKNATNEVDPFRFRVLIPVTALQ 101 (160)
T ss_pred HHHhhhhccee-eecC-ChhhccccCCceEEEEEecceEEEEEcCcchhhhccccccccccccccCceeEEEeeceeeee
Confidence 58999999754 5331 11234456777999999999988 5664321 1 1 0 22 44444
Q ss_pred ceecCCCCcCCCCCCCCCCCCccEEEEEecC---CCCCCceEEEEcCChHHHHHHHHHHHHHHHH
Q psy11101 74 VEEKVPEELTPAGSGGSRGGLSAYFLLKSID---PKKPALTFLCQAPTEESRSEWLRCLGLILQT 135 (157)
Q Consensus 74 l~e~~~~~~~~~g~~~~~~gd~~kF~iw~~~---~~~~~~~~~LqA~s~e~K~~Wv~~I~~iL~~ 135 (157)
+..+... + -...+-|+|-..+ -.+++.+|.|=.+++|.|+..++-||+||.+
T Consensus 102 VR~~n~a-----d-----~e~~~vwEliH~kSe~egRpE~vfqLCcS~~E~k~~flK~Irsilre 156 (160)
T cd01255 102 VRASSAA-----D-----MESNFLWELIHLKSELEGRPEKVFVLCCSTAESRNAFLKTIRSILRE 156 (160)
T ss_pred eecCCCc-----C-----cccceEEEEEeecccccCCCcceEEEecCCHHHHHHHHHHHHHHHHH
Confidence 4443321 1 1234778887522 1246789999999999999999999999975
No 22
>KOG4424|consensus
Probab=97.24 E-value=0.00055 Score=62.86 Aligned_cols=104 Identities=22% Similarity=0.414 Sum_probs=70.6
Q ss_pred CccChhcccc-eeeeccEEEEECCCCCCCCcCCCCceeEEEeecceeEEEEeecCCC--Cce------eeeeeceecCCC
Q psy11101 10 FDGKITAQGK-LLMRGPLYCTETSVASSSSSNSRGKELQVFLFEQSMIFSEAVGKKT--QFS------VNKMSVEEKVPE 80 (157)
Q Consensus 10 ~dg~l~~qG~-LL~qd~f~V~e~~~~~~~~~~~k~keR~VFLFEq~lifsk~~~~k~--~~~------~~~~~l~e~~~~ 80 (157)
-+++|..=|+ ||.-|..+=.+.+ +....+|++|||-.++++|++..... .|. +..|.+.+.+-+
T Consensus 261 ~e~dIV~PsreLiKEG~l~Kis~k-------~~~~qeRylfLFNd~~lyc~~r~~~~~~k~~~r~~~s~~~~~v~~~~~~ 333 (623)
T KOG4424|consen 261 NEEDIVSPSRELIKEGQLQKISAK-------NGTTQERYLFLFNDILLYCKPRKRLPGSKYEVRARCSISHMQVQEDDNE 333 (623)
T ss_pred CCccccCcHHHHhhccceeeeecc-------CCCcceeEEEEehhHHHhhhhhhhcccceeccceeeccCcchhcccccc
Confidence 3666666664 4455555533332 23566999999999999999875322 233 455555554332
Q ss_pred CcCCCCCCCCCCCCccEEEEEecCCCCCCceEEEEcCChHHHHHHHHHHHHHHHHHH
Q psy11101 81 ELTPAGSGGSRGGLSAYFLLKSIDPKKPALTFLCQAPTEESRSEWLRCLGLILQTQR 137 (157)
Q Consensus 81 ~~~~~g~~~~~~gd~~kF~iw~~~~~~~~~~~~LqA~s~e~K~~Wv~~I~~iL~~Q~ 137 (157)
+ -+..|.+.=+ .....|||.|.+.|..|+..|.+.++.-.
T Consensus 334 ~------------~~~tF~~~G~-----~r~vel~a~t~~ek~eWv~~I~~~Id~~k 373 (623)
T KOG4424|consen 334 E------------LPHTFILTGK-----KRGVELQARTEQEKKEWVQAIQDAIDKHK 373 (623)
T ss_pred c------------CCceEEEecc-----cceEEeecCchhhHHHHHHHHHHHHHHHH
Confidence 1 3457888542 34789999999999999999999998654
No 23
>cd00900 PH-like Pleckstrin homology-like domain. Pleckstrin homology-like domain. This family includes the PH domain, both the Shc-like and IRS-like PTB domains, the ran-binding domain, the EVH1 domain, a domain in neurobeachin and the third domain of FERM. All of these domains have a PH fold, but lack significant sequence similarity. They are generally involved in targeting to protein to the appropriate cellular location or interacting with a binding partner. The PH domain is commonly found in eukaryotic signaling proteins. This domain family possesses multiple functions including the ability to bind inositol phosphates and to other proteins.
Probab=97.22 E-value=0.0054 Score=40.42 Aligned_cols=78 Identities=27% Similarity=0.401 Sum_probs=55.2
Q ss_pred CCCceeEEEeecceeEEEEeecCCCC----ceeeeeeceecCCCCcCCCCCCCCCCCCccEEEEEecCCCCCCceEEEEc
Q psy11101 41 SRGKELQVFLFEQSMIFSEAVGKKTQ----FSVNKMSVEEKVPEELTPAGSGGSRGGLSAYFLLKSIDPKKPALTFLCQA 116 (157)
Q Consensus 41 ~k~keR~VFLFEq~lifsk~~~~k~~----~~~~~~~l~e~~~~~~~~~g~~~~~~gd~~kF~iw~~~~~~~~~~~~LqA 116 (157)
...+.|+++|+...+.+.+....... +.+..+.+....+. .+.+..|.|...++ ....|.++|
T Consensus 17 ~~w~~~~~~l~~~~l~~~~~~~~~~~~~~~~~l~~~~v~~~~~~-----------~~~~~~F~i~~~~~--~~~~~~~~~ 83 (99)
T cd00900 17 KRWKRRWFFLFDDGLLLYKSDDKKEIKPGSIPLSEISVEEDPDG-----------SDDPNCFAIVTKDR--GRRVFVFQA 83 (99)
T ss_pred cCceeeEEEEECCEEEEEEcCCCCcCCCCEEEccceEEEECCCC-----------CCCCceEEEECCCC--CcEEEEEEc
Confidence 46679999999999998887754432 22333334333221 13457899988653 346999999
Q ss_pred CChHHHHHHHHHHHH
Q psy11101 117 PTEESRSEWLRCLGL 131 (157)
Q Consensus 117 ~s~e~K~~Wv~~I~~ 131 (157)
.|.+..+.|+..|++
T Consensus 84 ~~~~~~~~W~~al~~ 98 (99)
T cd00900 84 DSEEEAQEWVEALQQ 98 (99)
T ss_pred CCHHHHHHHHHHHhc
Confidence 999999999998875
No 24
>cd01225 PH_Cool_Pix Cool (cloned out of library)/Pix (PAK-interactive exchange factor) pleckstrin homology (PH) domain. Cool (cloned out of library)/Pix (PAK-interactive exchange factor) pleckstrin homology (PH) domain. Cool/Pix contains an N-terminal SH3 domain followed by a RhoGEF (DH) and PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=97.19 E-value=0.007 Score=44.90 Aligned_cols=100 Identities=14% Similarity=0.238 Sum_probs=70.8
Q ss_pred Ccc-ChhcccceeeeccEEEEECCCCCCCCcCCCCceeEEEeecceeEEEEeecCCCCce------eeeeeceecCCCCc
Q psy11101 10 FDG-KITAQGKLLMRGPLYCTETSVASSSSSNSRGKELQVFLFEQSMIFSEAVGKKTQFS------VNKMSVEEKVPEEL 82 (157)
Q Consensus 10 ~dg-~l~~qG~LL~qd~f~V~e~~~~~~~~~~~k~keR~VFLFEq~lifsk~~~~k~~~~------~~~~~l~e~~~~~~ 82 (157)
|+| +|+.+|+.+.=..+.|-.+. -.-..+|.++||...++|.....+-++|. ++.|.++...+
T Consensus 1 Weg~~i~~lG~vi~mS~V~~~~~~-------~qe~~eRyLvLFp~~LlilS~s~r~sGf~yqGkLPL~~i~v~~lEd--- 70 (111)
T cd01225 1 WEGQDIKTLGNVIHMSQVAVQYGA-------GEEKRERYLVLFPNVLLMLSASPRMSGFIYQGKLPLTGIIVTRLED--- 70 (111)
T ss_pred CCCcchhhcCceEEEEEEEEecCC-------ccccceeEEEEcCceEEEEEcCCCccceEEeeeecccccEEechHh---
Confidence 345 78899999987777775432 12346999999999999888765555543 66666665332
Q ss_pred CCCCCCCCCCCCccEEEEEecCCCCCCceEEEEcCChHHHHHHHHHHHH
Q psy11101 83 TPAGSGGSRGGLSAYFLLKSIDPKKPALTFLCQAPTEESRSEWLRCLGL 131 (157)
Q Consensus 83 ~~~g~~~~~~gd~~kF~iw~~~~~~~~~~~~LqA~s~e~K~~Wv~~I~~ 131 (157)
.++.++.|+|.-.-+ ++.+.-.++.+..+.|+..+.+
T Consensus 71 --------~e~~~~aFeI~G~li----~~i~v~C~~~~e~~~Wl~hL~~ 107 (111)
T cd01225 71 --------TEALKNAFEISGPLI----ERIVVVCNNPQDAQEWVELLNA 107 (111)
T ss_pred --------ccCccceEEEeccCc----CcEEEEeCCHHHHHHHHHHHHh
Confidence 123468999976542 3666777899999999998866
No 25
>KOG2996|consensus
Probab=96.90 E-value=0.004 Score=57.80 Aligned_cols=107 Identities=16% Similarity=0.313 Sum_probs=66.7
Q ss_pred hhhCCccChhcccceeeeccEEEEECCCCCCCCcCCCCceeEEEeecceeEEEEeecCCCC---ce-eeeeeceecCCCC
Q psy11101 6 RLKGFDGKITAQGKLLMRGPLYCTETSVASSSSSNSRGKELQVFLFEQSMIFSEAVGKKTQ---FS-VNKMSVEEKVPEE 81 (157)
Q Consensus 6 ~l~g~dg~l~~qG~LL~qd~f~V~e~~~~~~~~~~~k~keR~VFLFEq~lifsk~~~~k~~---~~-~~~~~l~e~~~~~ 81 (157)
.|++-+..|..-|+.-.-|+.-+++..+ .++++|++|||+++||.||.....-. |. ++.+.+.+..-+
T Consensus 392 SIenL~~pl~~~GRpkiDGElki~s~~~-------~tkqdRyiFLfDkvviVCKrkG~sy~lke~i~l~~y~m~d~~~~- 463 (865)
T KOG2996|consen 392 SIENLSQPLHDFGRPKIDGELKITSTQA-------HTKQDRYIFLFDKVVIVCKRKGDSYELKEIIYLNAYKMSDDPID- 463 (865)
T ss_pred hHHhhcchHHHhCCCCcCceEEEeehhc-------CCccceEEeEecceEEEeeccCcchhHHHHHHHHhhccccCCCC-
Confidence 4677778888999999999999987642 56789999999999999998843221 11 233333332211
Q ss_pred cCCCCCCCCCC--C--CccEE-EEEecCCCCCCceEEEEcCChHHHHHHHHHH
Q psy11101 82 LTPAGSGGSRG--G--LSAYF-LLKSIDPKKPALTFLCQAPTEESRSEWLRCL 129 (157)
Q Consensus 82 ~~~~g~~~~~~--g--d~~kF-~iw~~~~~~~~~~~~LqA~s~e~K~~Wv~~I 129 (157)
=.++-+ + =..-| .|..++.+ -|.+-..+.+.|..|...+
T Consensus 464 -----~kd~kk~~~~~ws~~f~lI~tqg~n----gl~fy~Kte~~kkkWmeqf 507 (865)
T KOG2996|consen 464 -----DKDNKKVSTITWSYGFYLIHTQGRN----GLEFYCKTEDLKKKWMEQF 507 (865)
T ss_pred -----chhhhhccceeeeeeEEEEEEcCCc----ceEEEEecHHHHHHHHHHH
Confidence 011100 0 01124 34445422 4566667999999997644
No 26
>KOG3523|consensus
Probab=96.71 E-value=0.0065 Score=56.38 Aligned_cols=109 Identities=22% Similarity=0.359 Sum_probs=64.8
Q ss_pred ceeeeccEE--EEECCCCCCCCcCCCCceeEEEeecceeEEEEeecCCCCce------eeeeeceecCCCCcCCCCCCCC
Q psy11101 19 KLLMRGPLY--CTETSVASSSSSNSRGKELQVFLFEQSMIFSEAVGKKTQFS------VNKMSVEEKVPEELTPAGSGGS 90 (157)
Q Consensus 19 ~LL~qd~f~--V~e~~~~~~~~~~~k~keR~VFLFEq~lifsk~~~~k~~~~------~~~~~l~e~~~~~~~~~g~~~~ 90 (157)
-|+.||.++ |+... ++.-..+.+.+.-|+|||-.++|+||++.... |. .+.+.+.....+.-.|.|-+.
T Consensus 474 wLvk~GELt~l~~~~~-s~~l~~k~~~~~vylfLFnD~Llitk~k~~~~-f~V~Dya~r~~l~ve~~e~~~~lp~~~~~- 550 (695)
T KOG3523|consen 474 WLVKRGELTQLVERRA-SPLLFSKRLSKTVYLFLFNDLLLITKKKSEGS-FQVFDYAPRSLLQVEKCEPELKLPGGANS- 550 (695)
T ss_pred hhhhccccceeecccc-cchhhcccccceeeeeeecceeeEeeecCCCc-eEEeeccchhhhhhhhcCcccCCCCCCcc-
Confidence 356677664 44431 22222233456999999999999999985443 44 344444443311001112221
Q ss_pred CCCCccEEEEEe-cCCCCCCceEEEEcCChHHHHHHHHHHH
Q psy11101 91 RGGLSAYFLLKS-IDPKKPALTFLCQAPTEESRSEWLRCLG 130 (157)
Q Consensus 91 ~~gd~~kF~iw~-~~~~~~~~~~~LqA~s~e~K~~Wv~~I~ 130 (157)
.-+-+.-|.+.. ++..+....|.|+|.|...++-|+..++
T Consensus 551 ~~~~~hlF~ltLl~N~~~~~~e~lL~a~s~Sd~~RWi~Al~ 591 (695)
T KOG3523|consen 551 LSSRPHLFLLTLLSNHQGRQTELLLSAESQSDRQRWISALR 591 (695)
T ss_pred cccccceEEEehhhccCCCceeeeecCCchHHHHHHHHhcC
Confidence 111234587775 4445566789999999999999988665
No 27
>cd01246 PH_oxysterol_bp Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding protein (OSBP) Pleckstrin homology (PH) domain. Oxysterol binding proteins are a multigene family that is conserved in yeast, flies, worms, mammals and plants. They all contain a C-terminal oxysterol binding domain, and most contain an N-terminal PH domain. OSBP PH domains bind to membrane phosphoinositides and thus likely play an important role in intracellular targeting. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=96.59 E-value=0.049 Score=36.72 Aligned_cols=72 Identities=15% Similarity=0.189 Sum_probs=49.0
Q ss_pred CCceeEEEeecceeEEEEeecCC--CC---ceeeeeeceecCCCCcCCCCCCCCCCCCccEEEEEecCCCCCCceEEEEc
Q psy11101 42 RGKELQVFLFEQSMIFSEAVGKK--TQ---FSVNKMSVEEKVPEELTPAGSGGSRGGLSAYFLLKSIDPKKPALTFLCQA 116 (157)
Q Consensus 42 k~keR~VFLFEq~lifsk~~~~k--~~---~~~~~~~l~e~~~~~~~~~g~~~~~~gd~~kF~iw~~~~~~~~~~~~LqA 116 (157)
.-+.|.+.|....+.+.+...+. .. ..+....+... +.++..|.|...+ ...|.++|
T Consensus 14 ~W~~r~~vl~~~~L~~~~~~~~~~~~~~~~i~l~~~~~~~~--------------~~~~~~F~i~~~~----~~~~~~~a 75 (91)
T cd01246 14 GWQKRWFVLDNGLLSYYKNKSSMRGKPRGTILLSGAVISED--------------DSDDKCFTIDTGG----DKTLHLRA 75 (91)
T ss_pred CceeeEEEEECCEEEEEecCccCCCCceEEEEeceEEEEEC--------------CCCCcEEEEEcCC----CCEEEEEC
Confidence 34689999999999987766543 11 11332222221 1235799998742 25899999
Q ss_pred CChHHHHHHHHHHHH
Q psy11101 117 PTEESRSEWLRCLGL 131 (157)
Q Consensus 117 ~s~e~K~~Wv~~I~~ 131 (157)
.|.+.++.|+..|+.
T Consensus 76 ~s~~e~~~Wi~al~~ 90 (91)
T cd01246 76 NSEEERQRWVDALEL 90 (91)
T ss_pred CCHHHHHHHHHHHHh
Confidence 999999999998864
No 28
>cd01233 Unc104 Unc-104 pleckstrin homology (PH) domain. Unc-104 pleckstrin homology (PH) domain. Unc-104 is a kinesin-like protein containing an N-terminal kinesin catalytic domain, followed by a forkhead associated domain with a C-terminal PH domain. These proteins are responsible for the transport of membrane vesicles along microtubules. The mechanism involves the binding of the PH domain to phosphatidiylinositol (4,5) P2-containing liposomes.
Probab=95.86 E-value=0.094 Score=37.25 Aligned_cols=77 Identities=13% Similarity=0.129 Sum_probs=46.1
Q ss_pred ceeEEEeecceeEEEEeecCCC---CceeeeeeceecCCCCcCCCCCCCCCCCCccEEEEEecCCCCCCceEEEEcCChH
Q psy11101 44 KELQVFLFEQSMIFSEAVGKKT---QFSVNKMSVEEKVPEELTPAGSGGSRGGLSAYFLLKSIDPKKPALTFLCQAPTEE 120 (157)
Q Consensus 44 keR~VFLFEq~lifsk~~~~k~---~~~~~~~~l~e~~~~~~~~~g~~~~~~gd~~kF~iw~~~~~~~~~~~~LqA~s~e 120 (157)
+.|.+-|-...+.+-+...... ...++...+....+. ...-+.+..|+|-.. ..+|.++|.|++
T Consensus 19 kkRwfvL~~~~L~yyk~~~~~~~~~~I~L~~~~v~~~~~~--------~~~~~~~~~F~I~t~-----~rt~~~~A~s~~ 85 (100)
T cd01233 19 TRRFVVVRRPYLHIYRSDKDPVERGVINLSTARVEHSEDQ--------AAMVKGPNTFAVCTK-----HRGYLFQALSDK 85 (100)
T ss_pred EEEEEEEECCEEEEEccCCCccEeeEEEecccEEEEccch--------hhhcCCCcEEEEECC-----CCEEEEEcCCHH
Confidence 5677777777776666543222 122333322221110 001124578999543 248999999999
Q ss_pred HHHHHHHHHHHHH
Q psy11101 121 SRSEWLRCLGLIL 133 (157)
Q Consensus 121 ~K~~Wv~~I~~iL 133 (157)
.++.|+..|+...
T Consensus 86 e~~~Wi~ai~~~~ 98 (100)
T cd01233 86 EMIDWLYALNPLY 98 (100)
T ss_pred HHHHHHHHhhhhh
Confidence 9999999997653
No 29
>cd01264 PH_melted Melted pleckstrin homology (PH) domain. Melted pleckstrin homology (PH) domain. The melted protein has a C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=95.63 E-value=0.02 Score=41.71 Aligned_cols=33 Identities=30% Similarity=0.642 Sum_probs=27.9
Q ss_pred ccEEEEEecCCCCCCceEEEEcCChHHHHHHHHHHHHH
Q psy11101 95 SAYFLLKSIDPKKPALTFLCQAPTEESRSEWLRCLGLI 132 (157)
Q Consensus 95 ~~kF~iw~~~~~~~~~~~~LqA~s~e~K~~Wv~~I~~i 132 (157)
+..|+|-+.+ .+|.|+|.|++.+++|+++|...
T Consensus 68 ~~~Fei~tp~-----rt~~l~A~se~e~e~WI~~i~~a 100 (101)
T cd01264 68 PKAFEIFTAD-----KTYILKAKDEKNAEEWLQCLNIA 100 (101)
T ss_pred CcEEEEEcCC-----ceEEEEeCCHHHHHHHHHHHHhh
Confidence 4689997643 49999999999999999999754
No 30
>cd01247 PH_GPBP Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. Goodpasture antigen binding protein (GPBP) Pleckstrin homology (PH) domain. The GPBP protein is a kinase that phosphorylates an N-terminal region of the alpha 3 chain of type IV collagen , which is commonly known as the goodpasture antigen. It has has an N-terminal PH domain and a C-terminal START domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cyt
Probab=95.26 E-value=0.05 Score=38.32 Aligned_cols=35 Identities=14% Similarity=0.175 Sum_probs=28.6
Q ss_pred CCccEEEEEecCCCCCCceEEEEcCChHHHHHHHHHHHH
Q psy11101 93 GLSAYFLLKSIDPKKPALTFLCQAPTEESRSEWLRCLGL 131 (157)
Q Consensus 93 gd~~kF~iw~~~~~~~~~~~~LqA~s~e~K~~Wv~~I~~ 131 (157)
.++++|+|.... ..+|.|.|.|++.++.|++.|.+
T Consensus 56 ~~~~~F~i~~~~----~r~~~L~A~s~~e~~~Wi~al~~ 90 (91)
T cd01247 56 FDENRFDISVNE----NVVWYLRAENSQSRLLWMDSVVR 90 (91)
T ss_pred CCCCEEEEEeCC----CeEEEEEeCCHHHHHHHHHHHhh
Confidence 357899997642 25999999999999999998853
No 31
>cd01250 PH_centaurin Centaurin Pleckstrin homology (PH) domain. Centaurin Pleckstrin homology (PH) domain. Centaurin beta and gamma consist of a PH domain, an ArfGAP domain and three ankyrin repeats. Centaurain gamma also has an N-terminal Ras homology domain. Centaurin alpha has a different domain architecture and its PH domain is in a different subfamily. Centaurin can bind to phosphatidlyinositol (3,4,5)P3. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=95.15 E-value=0.41 Score=32.30 Aligned_cols=79 Identities=16% Similarity=0.217 Sum_probs=45.8
Q ss_pred CCceeEEEeecceeEEEEeecCCCCceeeeeeceecCCCCcCCCCCCCCCCCCccEEEEEecCCCCCCceEEEEcCChHH
Q psy11101 42 RGKELQVFLFEQSMIFSEAVGKKTQFSVNKMSVEEKVPEELTPAGSGGSRGGLSAYFLLKSIDPKKPALTFLCQAPTEES 121 (157)
Q Consensus 42 k~keR~VFLFEq~lifsk~~~~k~~~~~~~~~l~e~~~~~~~~~g~~~~~~gd~~kF~iw~~~~~~~~~~~~LqA~s~e~ 121 (157)
.-+.|.+.|-+..+++.+............+.+....-. . .+...+.+..|.|...+ ..|.++|.|.+.
T Consensus 15 ~W~kr~~~L~~~~l~~y~~~~~~~~~~~~~i~l~~~~v~---~---~~~~~~~~~~f~i~~~~-----~~~~f~a~s~~~ 83 (94)
T cd01250 15 EWKKRWFVLKNGQLTYHHRLKDYDNAHVKEIDLRRCTVR---H---NGKQPDRRFCFEVISPT-----KTWHFQADSEEE 83 (94)
T ss_pred CceEEEEEEeCCeEEEEcCCcccccccceEEeccceEEe---c---CccccCCceEEEEEcCC-----cEEEEECCCHHH
Confidence 346788888888888765443211111112222211000 0 00111235688887643 489999999999
Q ss_pred HHHHHHHHHH
Q psy11101 122 RSEWLRCLGL 131 (157)
Q Consensus 122 K~~Wv~~I~~ 131 (157)
.+.|+..|++
T Consensus 84 ~~~Wi~al~~ 93 (94)
T cd01250 84 RDDWISAIQE 93 (94)
T ss_pred HHHHHHHHhc
Confidence 9999998864
No 32
>KOG2070|consensus
Probab=94.61 E-value=0.057 Score=49.46 Aligned_cols=103 Identities=15% Similarity=0.320 Sum_probs=72.0
Q ss_pred hhhhCCccC-hhcccceeeeccEEEEECCCCCCCCcCCCCceeEEEeecceeEEEEeecCCCCce------eeeeeceec
Q psy11101 5 ARLKGFDGK-ITAQGKLLMRGPLYCTETSVASSSSSNSRGKELQVFLFEQSMIFSEAVGKKTQFS------VNKMSVEEK 77 (157)
Q Consensus 5 ~~l~g~dg~-l~~qG~LL~qd~f~V~e~~~~~~~~~~~k~keR~VFLFEq~lifsk~~~~k~~~~------~~~~~l~e~ 77 (157)
+.++||.|+ |+.+|.+|.=|...|--.. .-.++|.+-||-+.++|-....+-+.|- +.-|-++-.
T Consensus 294 ~~i~~w~g~d~s~lG~iiymg~v~Vqy~~--------ad~~dRy~~LF~~~llflsvs~rMs~fIyegKlp~tG~iV~kl 365 (661)
T KOG2070|consen 294 EPIRNWEGDDISTLGNIIYMGQVLVQYAG--------ADEKDRYLLLFPNVLLFLSVSPRMSGFIYEGKLPTTGMIVTKL 365 (661)
T ss_pred ccccccccchhhhccceEeeeehhhhhcC--------cchhhheeeeccceeeeeEeccccchhhhccccccceeEEeeh
Confidence 468999995 9999999999988885432 2245999999999999987765544431 333333332
Q ss_pred CCCCcCCCCCCCCCCCCccEEEEEecCCCCCCceEEEEcCChHHHHHHHHHHH
Q psy11101 78 VPEELTPAGSGGSRGGLSAYFLLKSIDPKKPALTFLCQAPTEESRSEWLRCLG 130 (157)
Q Consensus 78 ~~~~~~~~g~~~~~~gd~~kF~iw~~~~~~~~~~~~LqA~s~e~K~~Wv~~I~ 130 (157)
.+ .++..+.|+|... ..++++.....+..-++|+..+.
T Consensus 366 Ed-----------te~~~nafeis~~----ti~rIv~~c~~~~~l~~wve~ln 403 (661)
T KOG2070|consen 366 ED-----------TENHRNAFEISGS----TIERIVVSCNNQQDLQEWVEHLN 403 (661)
T ss_pred hh-----------hhccccccccccc----chhheeeccCChHHHHHHHHHhh
Confidence 22 1234578999653 23467777788889999998765
No 33
>cd01253 PH_beta_spectrin Beta-spectrin pleckstrin homology (PH) domain. Beta-spectrin pleckstrin homology (PH) domain. Beta spectrin binds actin and functions as a major component of the cytoskeleton underlying cellular membranes. Beta spectrin consists of multiple spectrin repeats followed by a PH domain, which binds to Inositol-1,4,5-Trisphosphate. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. PH domains are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=94.58 E-value=0.33 Score=34.17 Aligned_cols=78 Identities=23% Similarity=0.261 Sum_probs=45.3
Q ss_pred ceeEEEeecceeEEEEeecCC--CCceeeeeeceecCCCCcCCCCCCCCCCCCccEEEEEecCCCCCCceEEEEcCChHH
Q psy11101 44 KELQVFLFEQSMIFSEAVGKK--TQFSVNKMSVEEKVPEELTPAGSGGSRGGLSAYFLLKSIDPKKPALTFLCQAPTEES 121 (157)
Q Consensus 44 keR~VFLFEq~lifsk~~~~k--~~~~~~~~~l~e~~~~~~~~~g~~~~~~gd~~kF~iw~~~~~~~~~~~~LqA~s~e~ 121 (157)
+.|.+-|-...++|.+..+.. .......|.++... +...+.....+..|.|...+ ...|.+||.|++.
T Consensus 24 k~r~~vL~~~~L~~ykd~~~~~~~~~~~~~i~l~~~~------i~~~~~~~k~~~~F~l~~~~----~~~~~f~a~s~e~ 93 (104)
T cd01253 24 DNVYGVLCGQSLSFYKDEKMAAENVHGEPPVDLTGAQ------CEVASDYTKKKHVFRLRLPD----GAEFLFQAPDEEE 93 (104)
T ss_pred ceEEEEEeCCEEEEEecCcccccCCCCCCcEeccCCE------EEecCCcccCceEEEEEecC----CCEEEEECCCHHH
Confidence 589999998888877643211 11111122222100 00011111234578887642 3589999999999
Q ss_pred HHHHHHHHHH
Q psy11101 122 RSEWLRCLGL 131 (157)
Q Consensus 122 K~~Wv~~I~~ 131 (157)
-+.|+..|+.
T Consensus 94 ~~~Wi~aL~~ 103 (104)
T cd01253 94 MSSWVRALKS 103 (104)
T ss_pred HHHHHHHHhc
Confidence 9999998863
No 34
>KOG3521|consensus
Probab=94.52 E-value=0.044 Score=51.59 Aligned_cols=92 Identities=20% Similarity=0.312 Sum_probs=66.1
Q ss_pred ceeeeccEEEEECCCCCCCCcCCCCceeEEEeecceeEEEEeecCCC--------CceeeeeeceecCCCCcCCCCCCCC
Q psy11101 19 KLLMRGPLYCTETSVASSSSSNSRGKELQVFLFEQSMIFSEAVGKKT--------QFSVNKMSVEEKVPEELTPAGSGGS 90 (157)
Q Consensus 19 ~LL~qd~f~V~e~~~~~~~~~~~k~keR~VFLFEq~lifsk~~~~k~--------~~~~~~~~l~e~~~~~~~~~g~~~~ 90 (157)
.||+-|..-+-|+|. -+.+=|.|||-.+++.||++.++. .|-+.+|-.....
T Consensus 426 qLlleGdlrmKegk~--------sK~DVhcfLfTDllLVcK~v~k~~drlKVIRpPll~dklv~q~~~------------ 485 (846)
T KOG3521|consen 426 QLLLEGDLRMKEGKG--------SKADVHCFLFTDLLLVCKKVQKKADRLKVIRPPLLMDKLVCQYLR------------ 485 (846)
T ss_pred hhhhccceecccCCC--------cccceeeeeehhHHHHhHHHhhhcccceeeccchhhcceeeeecC------------
Confidence 367777777777742 124789999999999999987632 2337777776654
Q ss_pred CCCCccEEEEEe-cCCCCCCceEEEEcCChHHHHHHHHHHHHHH
Q psy11101 91 RGGLSAYFLLKS-IDPKKPALTFLCQAPTEESRSEWLRCLGLIL 133 (157)
Q Consensus 91 ~~gd~~kF~iw~-~~~~~~~~~~~LqA~s~e~K~~Wv~~I~~iL 133 (157)
|+..|-+-+ .+=.-..-.|++|++.++..-.|+..|.+.+
T Consensus 486 ---dpnsf~lVhLtEFh~a~~ayt~hcs~p~d~~~W~D~l~~Aq 526 (846)
T KOG3521|consen 486 ---DPNSFLLVHLTEFHTAQAAYTMHCSGPEDTLRWTDMLKMAQ 526 (846)
T ss_pred ---CCCceEEEeechhhhhhhhheeecCChhhHHHHHHHHHHHH
Confidence 456775553 2212234579999999999999999988774
No 35
>cd01251 PH_centaurin_alpha Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha Pleckstrin homology (PH) domain. Centaurin alpha is a phophatidlyinositide binding protein consisting of an N-terminal ArfGAP domain and two PH domains. In response to growth factor activation, PI3K phosphorylates phosphatidylinositol 4,5-bisphosphate to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 1 is recruited to the plasma membrane following growth factor stimulation by specific binding of its PH domain to phosphatidylinositol 3,4,5-trisphosphate. Centaurin alpha 2 is constitutively bound to the plasma membrane since it binds phosphatidylinositol 4,5-bisphosphate and phosphatidylinositol 3,4,5-trisphosphate with equal affinity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specifici
Probab=94.47 E-value=0.14 Score=36.64 Aligned_cols=34 Identities=26% Similarity=0.396 Sum_probs=28.7
Q ss_pred cEEEEEecCCCCCCceEEEEcCChHHHHHHHHHHHHHHH
Q psy11101 96 AYFLLKSIDPKKPALTFLCQAPTEESRSEWLRCLGLILQ 134 (157)
Q Consensus 96 ~kF~iw~~~~~~~~~~~~LqA~s~e~K~~Wv~~I~~iL~ 134 (157)
..|.|-.. ..+|.|.|.|++.++.|++.|+.++.
T Consensus 68 ~~F~i~t~-----~Rty~l~a~s~~e~~~Wi~ai~~v~~ 101 (103)
T cd01251 68 YGVTLVTP-----ERKFLFACETEQDRREWIAAFQNVLS 101 (103)
T ss_pred ceEEEEeC-----CeEEEEECCCHHHHHHHHHHHHHHhc
Confidence 37888664 24999999999999999999998863
No 36
>cd01252 PH_cytohesin Cytohesin Pleckstrin homology (PH) domain. Cytohesin Pleckstrin homology (PH) domain. Cytohesin is an ARF-Guanine nucleotide Exchange Factor (GEF), which has a Sec7-type Arf-GEFdomain and a pleckstrin homology domain. It specifically binds phosphatidylinositol-3,4,5-trisphosphate (PtdIns(3,4, 5)P3) via its PH domain and it acts as a PI 3-kinase effector mediating biological responses such as cell adhesion and membrane trafficking. PH domains are only found in eukaryotes. They share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=94.35 E-value=0.6 Score=34.23 Aligned_cols=80 Identities=18% Similarity=0.216 Sum_probs=49.2
Q ss_pred CceeEEEeecceeEEEEeecCCC---CceeeeeeceecCCCCcCCCCCCCCCCCCccEEEEEecCCC-------------
Q psy11101 43 GKELQVFLFEQSMIFSEAVGKKT---QFSVNKMSVEEKVPEELTPAGSGGSRGGLSAYFLLKSIDPK------------- 106 (157)
Q Consensus 43 ~keR~VFLFEq~lifsk~~~~k~---~~~~~~~~l~e~~~~~~~~~g~~~~~~gd~~kF~iw~~~~~------------- 106 (157)
=+.|.+-|.+..+.+-+...... .+.++...+....+ .+.+..|+|...+.+
T Consensus 16 WkkRwfvL~~~~L~yyk~~~~~~~~g~I~L~~~~v~~~~~------------~~~~~~F~i~~~~~~~~i~~~~~~~~~~ 83 (125)
T cd01252 16 WKRRWFILTDNCLYYFEYTTDKEPRGIIPLENVSIREVED------------PSKPFCFELFSPSDKQQIKACKTESDGR 83 (125)
T ss_pred eEeEEEEEECCEEEEEcCCCCCCceEEEECCCcEEEEccc------------CCCCeeEEEECCcccccccccccccccc
Confidence 36788888888877666432221 12233222222111 124467888764421
Q ss_pred ---CCCceEEEEcCChHHHHHHHHHHHHHHH
Q psy11101 107 ---KPALTFLCQAPTEESRSEWLRCLGLILQ 134 (157)
Q Consensus 107 ---~~~~~~~LqA~s~e~K~~Wv~~I~~iL~ 134 (157)
.....|.++|.|++..+.|+..|+.++.
T Consensus 84 ~~~~~~~~~~~~A~s~~e~~~Wi~al~~~~~ 114 (125)
T cd01252 84 VVEGNHSVYRISAANDEEMDEWIKSIKASIS 114 (125)
T ss_pred ccccCceEEEEECCCHHHHHHHHHHHHHHHh
Confidence 1225888999999999999999999874
No 37
>cd01260 PH_CNK Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain. CNK is believed to regulate the activity and the subcellular localization of RAS activated RAF. CNK is composed of N-terminal SAM and PDZ domains along with a central or C-terminal PH domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskelet
Probab=94.14 E-value=0.45 Score=32.99 Aligned_cols=72 Identities=13% Similarity=0.087 Sum_probs=44.2
Q ss_pred ceeEEEeecceeEEEEeecCCC---CceeeeeeceecCCCCcCCCCCCCCCCCCccEEEEEecCCCCCCceEEEEcCChH
Q psy11101 44 KELQVFLFEQSMIFSEAVGKKT---QFSVNKMSVEEKVPEELTPAGSGGSRGGLSAYFLLKSIDPKKPALTFLCQAPTEE 120 (157)
Q Consensus 44 keR~VFLFEq~lifsk~~~~k~---~~~~~~~~l~e~~~~~~~~~g~~~~~~gd~~kF~iw~~~~~~~~~~~~LqA~s~e 120 (157)
+.|.+.|-...+++-+...+.. .+.++...+....+ ...+..|.|... . ..+|.++|.|++
T Consensus 21 kkrwfvL~~~~L~yyk~~~~~~~~~~I~L~~~~v~~~~~------------~~k~~~F~I~~~--~--~~~~~f~a~s~~ 84 (96)
T cd01260 21 ARRWFVLKGTTLYWYRSKQDEKAEGLIFLSGFTIESAKE------------VKKKYAFKVCHP--V--YKSFYFAAETLD 84 (96)
T ss_pred eeEEEEEECCEEEEECCCCCCccceEEEccCCEEEEchh------------cCCceEEEECCC--C--CcEEEEEeCCHH
Confidence 5688888877777665443222 12233222222111 113457888643 2 248999999999
Q ss_pred HHHHHHHHHHH
Q psy11101 121 SRSEWLRCLGL 131 (157)
Q Consensus 121 ~K~~Wv~~I~~ 131 (157)
..+.|+..|++
T Consensus 85 e~~~Wi~ai~~ 95 (96)
T cd01260 85 DLSQWVNHLIT 95 (96)
T ss_pred HHHHHHHHHHh
Confidence 99999999975
No 38
>cd01238 PH_Tec Tec pleckstrin homology (PH) domain. Tec pleckstrin homology (PH) domain. Proteins in the Tec family of cytoplasmic protein tyrosine kinases that includes Bruton's tyrosine kinase (BTK), BMX, IL2-inducible T-cell kinase (Itk) and Tec. These proteins generally have an N-terminal PH domain, followed by a Tek homology (TH) domain, a SH3 domain, a SH2 domain and a kinase domain. Tec PH domains tether these proteins to membranes following the activation of PI3K and its subsequent phosphorylation of phosphoinositides. The importance of PH domain membrane anchoring is confirmed by the discovery of a mutation of a critical arginine residue in the BTK PH domain, which causes X-linked agammaglobulinemia (XLA) in humans and a related disorder is mice. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few dis
Probab=94.13 E-value=0.09 Score=37.90 Aligned_cols=34 Identities=29% Similarity=0.451 Sum_probs=27.8
Q ss_pred CccEEEEEecCCCCCCceEEEEcCChHHHHHHHHHHHHH
Q psy11101 94 LSAYFLLKSIDPKKPALTFLCQAPTEESRSEWLRCLGLI 132 (157)
Q Consensus 94 d~~kF~iw~~~~~~~~~~~~LqA~s~e~K~~Wv~~I~~i 132 (157)
+.+.|.|-..+ .+|-++|.|++.++.|+..|+++
T Consensus 73 ~~~~F~i~t~~-----r~~yl~A~s~~er~~WI~ai~~~ 106 (106)
T cd01238 73 FKYPFQVVHDE-----GTLYVFAPTEELRKRWIKALKQV 106 (106)
T ss_pred cCccEEEEeCC-----CeEEEEcCCHHHHHHHHHHHHhC
Confidence 35789997743 37889999999999999999863
No 39
>cd01265 PH_PARIS-1 PARIS-1 pleckstrin homology (PH) domain. PARIS-1 pleckstrin homology (PH) domain. PARIS-1 contains a PH domain and a TBC-type GTPase catalytic domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=93.93 E-value=0.13 Score=36.24 Aligned_cols=33 Identities=18% Similarity=0.279 Sum_probs=27.4
Q ss_pred ccEEEEEecCCCCCCceEEEEcCChHHHHHHHHHHHHH
Q psy11101 95 SAYFLLKSIDPKKPALTFLCQAPTEESRSEWLRCLGLI 132 (157)
Q Consensus 95 ~~kF~iw~~~~~~~~~~~~LqA~s~e~K~~Wv~~I~~i 132 (157)
++.|.|-.. + .+|.++|.|++.++.|++.|...
T Consensus 61 ~~~F~i~t~--~---r~y~l~A~s~~e~~~Wi~al~~~ 93 (95)
T cd01265 61 KGRFEIHSN--N---EVIALKASSDKQMNYWLQALQSK 93 (95)
T ss_pred CCEEEEEcC--C---cEEEEECCCHHHHHHHHHHHHhh
Confidence 578999653 2 48999999999999999988754
No 40
>cd01244 PH_RasGAP_CG9209 RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. RAS_GTPase activating protein (GAP)_CG9209 pleckstrin homology (PH) domain. This protein consists of two C2 domains, followed by a RasGAP domain, a PH domain and a BTK domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=93.91 E-value=0.57 Score=33.65 Aligned_cols=75 Identities=15% Similarity=0.112 Sum_probs=45.8
Q ss_pred ceeEEEeecceeEEEEeecCC--CCceeeeeeceecCCCCcCCCCCCCCCCCCccEEEEEecCCCCCCceEEEEcCChHH
Q psy11101 44 KELQVFLFEQSMIFSEAVGKK--TQFSVNKMSVEEKVPEELTPAGSGGSRGGLSAYFLLKSIDPKKPALTFLCQAPTEES 121 (157)
Q Consensus 44 keR~VFLFEq~lifsk~~~~k--~~~~~~~~~l~e~~~~~~~~~g~~~~~~gd~~kF~iw~~~~~~~~~~~~LqA~s~e~ 121 (157)
|.|..-|=...|.+.|....+ ....++.+.-.+.++++ .-+.+..|.|-..+ .+|.+||.|++.
T Consensus 22 KkRwF~Lt~~~L~Y~k~~~~~~~g~I~L~~i~~ve~v~~~---------~~~~~~~fqivt~~-----r~~yi~a~s~~E 87 (98)
T cd01244 22 KKRYFQLTTTHLSWAKDVQCKKSALIKLAAIKGTEPLSDK---------SFVNVDIITIVCED-----DTMQLQFEAPVE 87 (98)
T ss_pred ceeEEEECCCEEEEECCCCCceeeeEEccceEEEEEcCCc---------ccCCCceEEEEeCC-----CeEEEECCCHHH
Confidence 455555555566666643221 12225555555544421 11223578886642 389999999999
Q ss_pred HHHHHHHHHHH
Q psy11101 122 RSEWLRCLGLI 132 (157)
Q Consensus 122 K~~Wv~~I~~i 132 (157)
++.|+..|+++
T Consensus 88 ~~~Wi~al~k~ 98 (98)
T cd01244 88 ATDWLNALEKQ 98 (98)
T ss_pred HHHHHHHHhcC
Confidence 99999998863
No 41
>KOG0931|consensus
Probab=93.52 E-value=0.051 Score=49.40 Aligned_cols=93 Identities=15% Similarity=0.189 Sum_probs=55.3
Q ss_pred cEEEEECCCCCCCCcCCCCceeEEEeecceeEEEEeecCCC---Cce------eeeeeceecCCCCcCCCCCCCCCCCCc
Q psy11101 25 PLYCTETSVASSSSSNSRGKELQVFLFEQSMIFSEAVGKKT---QFS------VNKMSVEEKVPEELTPAGSGGSRGGLS 95 (157)
Q Consensus 25 ~f~V~e~~~~~~~~~~~k~keR~VFLFEq~lifsk~~~~k~---~~~------~~~~~l~e~~~~~~~~~g~~~~~~gd~ 95 (157)
.|.|.|+.+. ...-.++|-||||-.++|.+|...+|+ +|+ +..|.+.. ++| .-
T Consensus 423 L~eV~Dpnk~----Qk~~ahqReVFLFNDllVV~K~~~kkk~s~TYtf~qs~~Llgmhv~l-----------Fqn---~y 484 (627)
T KOG0931|consen 423 LFEVPDPNKP----QKLGAHQREVFLFNDLLVVTKIFQKKKTSVTYTFRQSFLLLGMHVQL-----------FQN---GY 484 (627)
T ss_pred eeecCCCCch----hhcccccceeeeecchhhhhhhhccCcceeEeehhhhhhHHHHHHHH-----------Hhh---cc
Confidence 3566666421 122346999999999999999887655 343 22232222 111 11
Q ss_pred cEEEEEecCCCCC-C--ceEEEEcCChHHHHHHHHHHHHHHHH
Q psy11101 96 AYFLLKSIDPKKP-A--LTFLCQAPTEESRSEWLRCLGLILQT 135 (157)
Q Consensus 96 ~kF~iw~~~~~~~-~--~~~~LqA~s~e~K~~Wv~~I~~iL~~ 135 (157)
..|.|....|... + ..+...|++.+-+..++.++++-+.+
T Consensus 485 Y~fGitltsp~~g~e~k~~ihFnA~n~~dr~kFv~Dl~ESIaE 527 (627)
T KOG0931|consen 485 YEFGITLTSPVPGSEKKVLIHFNAPNFQDRCKFVADLRESIAE 527 (627)
T ss_pred ccCceEEeccCCCCceeEEEEecCCCHHHHHHHHHHHHHHHHH
Confidence 3455554333322 1 23444699999999999998876543
No 42
>KOG3520|consensus
Probab=93.26 E-value=0.026 Score=55.64 Aligned_cols=96 Identities=18% Similarity=0.350 Sum_probs=59.9
Q ss_pred ccceeeeccEEEEECCCCCCCCcCCCCceeEEEeecceeEEEEeecCCCCce----------eeeeeceecCCCCcCCCC
Q psy11101 17 QGKLLMRGPLYCTETSVASSSSSNSRGKELQVFLFEQSMIFSEAVGKKTQFS----------VNKMSVEEKVPEELTPAG 86 (157)
Q Consensus 17 qG~LL~qd~f~V~e~~~~~~~~~~~k~keR~VFLFEq~lifsk~~~~k~~~~----------~~~~~l~e~~~~~~~~~g 86 (157)
.=+|+.=|.++.--++ .|-++-||.|+++++||--..+.|--|+ +.++ |...+.+
T Consensus 618 ~rkLihdG~Ltwk~~~--------gk~~dv~vlLLtD~LvlLqeqD~Kyifksl~~~spVisL~~l-ivRevAt------ 682 (1167)
T KOG3520|consen 618 RRKLIHDGPLTWKTAR--------GKTKDVHVLLLTDILVLLQEKDQKYIFKSLDKKSPVISLQKL-IVREVAT------ 682 (1167)
T ss_pred hhheeccCceEEeecc--------CchhhhHHHHHHHHHHHhhhcCceeEeeccccCCCceehHHH-HHHHHhc------
Confidence 3355655555543332 4667999999999999655444332121 3334 2222222
Q ss_pred CCCCCCCCccE-EEEEecCCCCCCceEEEEcCChHHHHHHHHHHHHHHHHH
Q psy11101 87 SGGSRGGLSAY-FLLKSIDPKKPALTFLCQAPTEESRSEWLRCLGLILQTQ 136 (157)
Q Consensus 87 ~~~~~~gd~~k-F~iw~~~~~~~~~~~~LqA~s~e~K~~Wv~~I~~iL~~Q 136 (157)
|..- |.|... +.+ .+-|-|.|.|.+.|++|.+-|.+...+.
T Consensus 683 -------d~ka~FlIs~s-~~~-pqmYEL~a~T~serntW~~li~~~v~s~ 724 (1167)
T KOG3520|consen 683 -------DEKAFFLISMS-DQG-PEMYELVAQSKSERNTWIQLIQDAVASC 724 (1167)
T ss_pred -------cccceEEEecC-CCC-CeeEEEecCCHHHHHHHHHHHHHHHHhC
Confidence 3444 455554 333 4699999999999999999888776543
No 43
>cd01235 PH_SETbf Set binding factor Pleckstrin Homology (PH) domain. Set binding factor Pleckstrin Homology (PH) domain. Set binding factor is a myotubularin-related pseudo-phosphatase consisting of a Denn domain, a Gram domain, an inactive phosphatase domain, a SID motif and a C-terminal PH domain. Its PH domain is predicted to bind lipids based upon its ability to respond to phosphatidylinositol 3-kinase .
Probab=93.06 E-value=1.7 Score=29.96 Aligned_cols=32 Identities=19% Similarity=0.259 Sum_probs=26.0
Q ss_pred cEEEEEecCCCCCCceEEEEcCChHHHHHHHHHHHHH
Q psy11101 96 AYFLLKSIDPKKPALTFLCQAPTEESRSEWLRCLGLI 132 (157)
Q Consensus 96 ~kF~iw~~~~~~~~~~~~LqA~s~e~K~~Wv~~I~~i 132 (157)
+.|.|... ..+|.+.|.|++..+.|+..|+++
T Consensus 69 ~~f~i~t~-----~r~~~~~a~s~~e~~~Wi~ai~~~ 100 (101)
T cd01235 69 GFFDLKTS-----KRTYNFLAENINEAQRWKEKIQQC 100 (101)
T ss_pred eEEEEEeC-----CceEEEECCCHHHHHHHHHHHHhh
Confidence 46777542 248999999999999999999876
No 44
>cd01266 PH_Gab Gab (Grb2-associated binder) pleckstrin homology (PH) domain. Gab (Grb2-associated binder) pleckstrin homology (PH) domain. The Gab subfamily includes several Gab proteins, Drosophila DOS and C. elegans SOC-1. They are scaffolding adaptor proteins, which possess N-terminal PH domains and a C-terminus with proline-rich regions and multiple phosphorylation sites. Following activation of growth factor receptors, Gab proteins are tyrosine phosphorylated and activate PI3K, which generates 3-phosphoinositide lipids. By binding to these lipids via the PH domain, Gab proteins remain in proximity to the receptor, leading to further signaling. While not all Gab proteins depend on the PH domain for recruitment, it is required for Gab activity. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display str
Probab=92.70 E-value=0.31 Score=34.94 Aligned_cols=23 Identities=22% Similarity=0.476 Sum_probs=21.6
Q ss_pred ceEEEEcCChHHHHHHHHHHHHH
Q psy11101 110 LTFLCQAPTEESRSEWLRCLGLI 132 (157)
Q Consensus 110 ~~~~LqA~s~e~K~~Wv~~I~~i 132 (157)
.+|.|.|.|++..+.|++.|++|
T Consensus 85 r~y~l~A~s~ee~~~Wi~~I~~~ 107 (108)
T cd01266 85 RDLYLVAKNEEEMTLWVNCICKL 107 (108)
T ss_pred ccEEEEECCHHHHHHHHHHHHhh
Confidence 48999999999999999999886
No 45
>PF15409 PH_8: Pleckstrin homology domain
Probab=89.99 E-value=0.7 Score=32.91 Aligned_cols=33 Identities=18% Similarity=0.178 Sum_probs=27.8
Q ss_pred CccEEEEEecCCCCCCceEEEEcCChHHHHHHHHHHHH
Q psy11101 94 LSAYFLLKSIDPKKPALTFLCQAPTEESRSEWLRCLGL 131 (157)
Q Consensus 94 d~~kF~iw~~~~~~~~~~~~LqA~s~e~K~~Wv~~I~~ 131 (157)
+.+.|.|-+. .+.|.|+|.|++..+.|+..|+.
T Consensus 55 ~~~~I~idsg-----~~i~hLKa~s~~~f~~Wv~aL~~ 87 (89)
T PF15409_consen 55 KSRRIDIDSG-----DEIWHLKAKSQEDFQRWVSALQK 87 (89)
T ss_pred CCCEEEEEcC-----CeEEEEEcCCHHHHHHHHHHHHh
Confidence 4588888553 46999999999999999998875
No 46
>cd01241 PH_Akt Akt pleckstrin homology (PH) domain. Akt pleckstrin homology (PH) domain. Akt (Protein Kinase B (PKB)) is a phosphatidylinositol 3'-kinase (PI3K)-dependent Ser/Thr kinase. The PH domain recruits Akt to the plasma membrane by binding to phosphoinositides (PtdIns-3,4-P2) and is required for activation. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=89.48 E-value=5.9 Score=28.09 Aligned_cols=37 Identities=19% Similarity=0.459 Sum_probs=25.0
Q ss_pred CccEEEEEecCCCC-CCceEEEEcCChHHHHHHHHHHHHH
Q psy11101 94 LSAYFLLKSIDPKK-PALTFLCQAPTEESRSEWLRCLGLI 132 (157)
Q Consensus 94 d~~kF~iw~~~~~~-~~~~~~LqA~s~e~K~~Wv~~I~~i 132 (157)
.+..|.|....+.. ....| .|.|.+.++.|++.|+.+
T Consensus 64 ~~~~F~i~~~~~~~~~~r~f--~a~s~ee~~eWi~ai~~v 101 (102)
T cd01241 64 RPNTFIIRCLQWTTVIERTF--HVESPEEREEWIHAIQTV 101 (102)
T ss_pred CcceEEEEeccCCcccCEEE--EeCCHHHHHHHHHHHHhh
Confidence 34589997322111 12244 689999999999999875
No 47
>KOG0930|consensus
Probab=88.92 E-value=4 Score=35.43 Aligned_cols=89 Identities=18% Similarity=0.259 Sum_probs=57.6
Q ss_pred eeEEEeecceeEEEEeecCCC--C-ceeeeeeceecCCCCcCCCCCCCCCCCCccEEEEEecCCCC--------------
Q psy11101 45 ELQVFLFEQSMIFSEAVGKKT--Q-FSVNKMSVEEKVPEELTPAGSGGSRGGLSAYFLLKSIDPKK-------------- 107 (157)
Q Consensus 45 eR~VFLFEq~lifsk~~~~k~--~-~~~~~~~l~e~~~~~~~~~g~~~~~~gd~~kF~iw~~~~~~-------------- 107 (157)
.|--.|=++|+-+-+-..+|. + ..+..+++.+-.+ +.-|.+|+|.+.+-++
T Consensus 279 rRWFiLtdNCLYYFe~tTDKEPrGIIpLeNlsir~Ved------------P~kP~cfEly~ps~~gq~IKACKTe~DGRv 346 (395)
T KOG0930|consen 279 RRWFILTDNCLYYFEYTTDKEPRGIIPLENLSIREVED------------PKKPNCFELYIPSNKGQVIKACKTEADGRV 346 (395)
T ss_pred heeEEeecceeeeeeeccCCCCCcceeccccceeeccC------------CCCCCeEEEecCCCCcCeeeeecccCCcee
Confidence 455556777777666554443 2 2355566655332 1345678887644221
Q ss_pred ---CCceEEEEcCChHHHHHHHHHHHHHHH--HHHHHHHhccC
Q psy11101 108 ---PALTFLCQAPTEESRSEWLRCLGLILQ--TQRDFLKAIQS 145 (157)
Q Consensus 108 ---~~~~~~LqA~s~e~K~~Wv~~I~~iL~--~Q~~~l~al~~ 145 (157)
.-.+|-+-|+|+|.+.+|++-|+..+. -|.+.|.+-.+
T Consensus 347 VEG~H~vYrIsA~~~Ee~~~Wi~sI~a~is~~Pfy~mla~rK~ 389 (395)
T KOG0930|consen 347 VEGNHSVYRISAPTPEEKDEWIKSIKAAISRDPFYEMLAARKK 389 (395)
T ss_pred EeccceEEEeeCCCHHHHHHHHHHHHHHhccCcHHHHHhcccc
Confidence 236899999999999999999999876 55566654433
No 48
>cd01230 PH_EFA6 EFA6 Pleckstrin Homology (PH) domain. EFA6 Pleckstrin Homology (PH) domain. EFA6 is an guanine nucleotide exchange factor for ARF6, which is involved in membrane recycling. It consists of a SEC7 domain followed by a PH domain. The EFA6 PH domain regulates its association with the plasma membrane. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=87.60 E-value=1.6 Score=32.43 Aligned_cols=80 Identities=14% Similarity=0.196 Sum_probs=47.2
Q ss_pred ceeEEEeecceeEEEEeecC-CC--Cce--eeeeeceecCCCCcCCCCCCCCCCCCccEEEEEecCCCCCCceEEEEcCC
Q psy11101 44 KELQVFLFEQSMIFSEAVGK-KT--QFS--VNKMSVEEKVPEELTPAGSGGSRGGLSAYFLLKSIDPKKPALTFLCQAPT 118 (157)
Q Consensus 44 keR~VFLFEq~lifsk~~~~-k~--~~~--~~~~~l~e~~~~~~~~~g~~~~~~gd~~kF~iw~~~~~~~~~~~~LqA~s 118 (157)
+.+.+-|=...+.|.|.... .. .+. -+-|.|+...-. +...-..-+..|.|... .+ ..|.+||++
T Consensus 27 k~~y~vL~g~~L~~yKDe~~~~~~~~~~~~~~~Isi~~a~~~------ia~dy~Kr~~VF~L~~~--~g--~~~lfqA~~ 96 (117)
T cd01230 27 KMFYGILRGLVLYLQKDEHKPGKSLSETELKNAISIHHALAT------RASDYSKKPHVFRLRTA--DW--REFLFQTSS 96 (117)
T ss_pred eEEEEEEECCEEEEEccCcccccccccccccceEEeccceeE------eeccccCCCcEEEEEcC--CC--CEEEEECCC
Confidence 57888998888888775532 11 121 233444433210 00001112235666553 33 489999999
Q ss_pred hHHHHHHHHHHHHHH
Q psy11101 119 EESRSEWLRCLGLIL 133 (157)
Q Consensus 119 ~e~K~~Wv~~I~~iL 133 (157)
.+.-+.|+..|+.+-
T Consensus 97 ~ee~~~Wi~~I~~~~ 111 (117)
T cd01230 97 LKELQSWIERINVVA 111 (117)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998754
No 49
>PF15406 PH_6: Pleckstrin homology domain
Probab=86.87 E-value=1.4 Score=32.72 Aligned_cols=31 Identities=23% Similarity=0.328 Sum_probs=25.8
Q ss_pred ccEEEEEecCCCCCCceEEEEcCChHHHHHHHHHHH
Q psy11101 95 SAYFLLKSIDPKKPALTFLCQAPTEESRSEWLRCLG 130 (157)
Q Consensus 95 ~~kF~iw~~~~~~~~~~~~LqA~s~e~K~~Wv~~I~ 130 (157)
+.+|.+...+ ...+.||+|+..|+.||..|.
T Consensus 80 ~~kF~f~~~G-----~khtF~A~s~aERD~Wv~~lk 110 (112)
T PF15406_consen 80 SNKFHFKIKG-----HKHTFEAASAAERDNWVAQLK 110 (112)
T ss_pred CceEEEEeCC-----ceeeeecCCHHHhccHHHHhh
Confidence 3589998843 478889999999999999874
No 50
>cd01249 PH_oligophrenin Oligophrenin Pleckstrin homology (PH) domain. Oligophrenin Pleckstrin homology (PH) domain. Oligophrenin is composed of a PH domain, a rhoGAP domain and a proline rich region. Closely related proteins have a C-terminal SH3 domain. PH domains a share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, as well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=86.83 E-value=1.2 Score=32.69 Aligned_cols=31 Identities=26% Similarity=0.425 Sum_probs=24.8
Q ss_pred cEEEEEecCCCCCCceEEEEcCChHHHHHHHHHH
Q psy11101 96 AYFLLKSIDPKKPALTFLCQAPTEESRSEWLRCL 129 (157)
Q Consensus 96 ~kF~iw~~~~~~~~~~~~LqA~s~e~K~~Wv~~I 129 (157)
-+|+|-+.. ++ .+++|||-|...+..|+..|
T Consensus 71 FCFei~~~~--~~-~~~~lQA~Se~~~~~Wi~A~ 101 (104)
T cd01249 71 FCFDVEVEE--KP-GVITMQALSEKDRRLWIEAM 101 (104)
T ss_pred eeEeeeecC--CC-CeEEEEecCHHHHHHHHHhh
Confidence 378998764 22 37999999999999998765
No 51
>cd01231 PH_Lnk LNK-family Pleckstrin homology (PH) domain. LNK-family Pleckstrin homology (PH) domain. The Lnk family of proteins consists of Lnk, APS and SH2B. They are adaptor proteins consisting of a PH domain and an SH2 domain, which mediates signaling through growth factor receptors. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. The lnk family PH domain is likely involved in targeting of the adaptor proteins to the plasma membrane.
Probab=86.81 E-value=1.7 Score=32.00 Aligned_cols=33 Identities=24% Similarity=0.332 Sum_probs=28.1
Q ss_pred ccEEEEEecCCCCCCceEEEEcCChHHHHHHHHHHHH
Q psy11101 95 SAYFLLKSIDPKKPALTFLCQAPTEESRSEWLRCLGL 131 (157)
Q Consensus 95 ~~kF~iw~~~~~~~~~~~~LqA~s~e~K~~Wv~~I~~ 131 (157)
...|.|...++ .-|+++|.+.+..++|+.+|+.
T Consensus 74 ~nTFvLK~~~~----~eyI~Ea~d~~q~~SWla~Ir~ 106 (107)
T cd01231 74 LYTFVLKVDDN----TDIIFEVGDEQQLNSWLAELRY 106 (107)
T ss_pred ccEEEEEecCC----ceEEEEcCCHHHHHHHHHHHhc
Confidence 46899988652 3799999999999999999984
No 52
>cd01257 PH_IRS Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. Insulin receptor substrate (IRS) pleckstrin homology (PH) domain. PH domains are only found in eukaryotes, and are often involved in targeting proteins to the plasma membrane via lipid binding. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes. The IRS PH domain targets IRS molecules to the plasma membrane, usually in response to insulin stimulation.
Probab=85.82 E-value=1.6 Score=31.43 Aligned_cols=32 Identities=22% Similarity=0.312 Sum_probs=25.7
Q ss_pred cEEEEEecCCCCCCceEEEEcCChHHHHHHHHHHHHH
Q psy11101 96 AYFLLKSIDPKKPALTFLCQAPTEESRSEWLRCLGLI 132 (157)
Q Consensus 96 ~kF~iw~~~~~~~~~~~~LqA~s~e~K~~Wv~~I~~i 132 (157)
..|+|...+ .+|.|.|.|++.++.|+..|.+|
T Consensus 70 ~~f~i~t~d-----r~f~l~aese~E~~~Wi~~i~~~ 101 (101)
T cd01257 70 HLIALYTRD-----EYFAVAAENEAEQDSWYQALLEL 101 (101)
T ss_pred eEEEEEeCC-----ceEEEEeCCHHHHHHHHHHHhhC
Confidence 467775532 48999999999999999998753
No 53
>cd01245 PH_RasGAP_CG5898 RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain. RAS GTPase-activating protein (GAP) CG5898 Pleckstrin homology (PH) domain. This protein has a domain architecture of SH2-SH3-SH2-PH-C2-Ras_GAP. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=85.15 E-value=1.9 Score=31.05 Aligned_cols=34 Identities=15% Similarity=0.314 Sum_probs=26.6
Q ss_pred CccEEEEEecCCCCCCceEEEEcCChHHHHHHHHHHHH
Q psy11101 94 LSAYFLLKSIDPKKPALTFLCQAPTEESRSEWLRCLGL 131 (157)
Q Consensus 94 d~~kF~iw~~~~~~~~~~~~LqA~s~e~K~~Wv~~I~~ 131 (157)
-|.+|+|-... + ..+|-+-|++ +.++.|++.|+.
T Consensus 64 r~~cFel~~~~--~-~~~y~~~a~~-~er~~Wi~~l~~ 97 (98)
T cd01245 64 RPNCFQIVERA--L-PTVYYSCRSS-EERDKWIESLQA 97 (98)
T ss_pred CCeEEEEecCC--C-CeEEEEeCCH-HHHHHHHHHHhc
Confidence 46799997653 2 1488888888 999999999874
No 54
>cd01236 PH_outspread Outspread Pleckstrin homology (PH) domain. Outspread Pleckstrin homology (PH) domain. Outspread contains two PH domains and a C-terminal coiled-coil region. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinase, tyrosine kinsases, regulators of G-proteins, endocytotic GTPAses, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=84.40 E-value=13 Score=26.96 Aligned_cols=33 Identities=24% Similarity=0.234 Sum_probs=26.4
Q ss_pred CccEEEEEecCCCCCCceEEEEcCChHHHHHHHHHHHH
Q psy11101 94 LSAYFLLKSIDPKKPALTFLCQAPTEESRSEWLRCLGL 131 (157)
Q Consensus 94 d~~kF~iw~~~~~~~~~~~~LqA~s~e~K~~Wv~~I~~ 131 (157)
.+..|.|-..+ .+|.|.|.|++.++.|++.|+.
T Consensus 70 ~~~~f~I~tp~-----R~f~l~Aete~E~~~Wi~~l~~ 102 (104)
T cd01236 70 QKFSICILTPD-----KEHFIKAETKEEISWWLNMLMV 102 (104)
T ss_pred CccEEEEECCC-----ceEEEEeCCHHHHHHHHHHHHh
Confidence 34678876542 4899999999999999998863
No 55
>cd01229 PH_etc2 Epithelial cell transforming 2 (ECT2) pleckstrin homology (PH) domain. Epithelial cell transforming 2 (ECT2) pleckstrin homology (PH) domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains. PH domains are found in cellular signaling proteins such as serine/threonine kinases, tyrosine kinases, regulators of G-proteins, endocytotic GTPases, adaptors, a well as cytoskeletal associated molecules and in lipid associated enzymes.
Probab=84.14 E-value=3.4 Score=31.30 Aligned_cols=88 Identities=17% Similarity=0.262 Sum_probs=51.7
Q ss_pred cCCCCceeEEEeecceeEEEEeecCC--------------CCce-eeeeeceecCCCCcCCCCCCCCCCCCccEEEEEec
Q psy11101 39 SNSRGKELQVFLFEQSMIFSEAVGKK--------------TQFS-VNKMSVEEKVPEELTPAGSGGSRGGLSAYFLLKSI 103 (157)
Q Consensus 39 ~~~k~keR~VFLFEq~lifsk~~~~k--------------~~~~-~~~~~l~e~~~~~~~~~g~~~~~~gd~~kF~iw~~ 103 (157)
+-.||-.--+|||-.+|=.||+..+. ..|+ +.-|.|...-- -+.++. .++.+..|++-.|
T Consensus 21 l~grGe~~tlFLfsD~lEi~kkR~kv~~~~KSP~~~~~~~~~~KHi~lmpLs~Ikr----VvdI~D-tE~c~~aF~L~~R 95 (129)
T cd01229 21 LCDRGEQVTLFLFNDCLEIARKRHKVIGTFKSPHGSTRPPASLKHIHLMPLSQIKK----VLDIRD-TEDCHNAFALLVR 95 (129)
T ss_pred ccCCCCeEEEEEecchHHHhhhcccccCCcCCCCCCCCCCcccceEEEeEhHHeEE----EEeeec-cccccceeEEEEe
Confidence 44688899999999999999876431 1233 22222221100 011111 2356789999999
Q ss_pred CCCCC-CceEEEEcC-ChHHHHHHHHHHHH
Q psy11101 104 DPKKP-ALTFLCQAP-TEESRSEWLRCLGL 131 (157)
Q Consensus 104 ~~~~~-~~~~~LqA~-s~e~K~~Wv~~I~~ 131 (157)
.|... +.-|..+-+ -+-.|..|++.+-.
T Consensus 96 ~p~d~~~~L~sF~l~~Ee~~K~~~Lk~Lcr 125 (129)
T cd01229 96 PPTEQANVLLSFQMTSEELPKEVWLKMLCR 125 (129)
T ss_pred CCccchheEEEEEecCCcchHHHHHHHHHH
Confidence 87632 233444434 44489999987754
No 56
>PF15410 PH_9: Pleckstrin homology domain; PDB: 1WJM_A 1BTN_A 1MPH_A.
Probab=83.99 E-value=2.5 Score=30.88 Aligned_cols=33 Identities=30% Similarity=0.573 Sum_probs=25.0
Q ss_pred ccEEEEEecCCCCCCceEEEEcCChHHHHHHHHHHHH
Q psy11101 95 SAYFLLKSIDPKKPALTFLCQAPTEESRSEWLRCLGL 131 (157)
Q Consensus 95 ~~kF~iw~~~~~~~~~~~~LqA~s~e~K~~Wv~~I~~ 131 (157)
+..|.|...+ + ..|.+||.|.+.=+.|+..|+-
T Consensus 84 ~~VFrL~~~d--g--~e~Lfqa~~~~~m~~Wi~~IN~ 116 (119)
T PF15410_consen 84 KNVFRLRTAD--G--SEYLFQASDEEEMNEWIDAINY 116 (119)
T ss_dssp SSEEEEE-TT--S---EEEEE-SSHHHHHHHHHHHHH
T ss_pred CeEEEEEeCC--C--CEEEEECCCHHHHHHHHHHHhh
Confidence 4678887653 3 4899999999999999999874
No 57
>cd01237 Unc112 Unc-112 pleckstrin homology (PH) domain. Unc-112 pleckstrin homology (PH) domain. Unc-112 and related proteins contain two FERM domains with a PH domain between them. Both the PH and FERM domains have a PH-like fold. The FERM domains are likely responsible for the role of Unc-112 in organizing beta-integrin. The specific role of the Unc-112 PH domain is not known, but it is predicted to be involved in mediating membrane interactions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=81.31 E-value=17 Score=26.70 Aligned_cols=85 Identities=13% Similarity=0.175 Sum_probs=49.5
Q ss_pred cCCCCceeEEEeecceeEEEE-eecCCCCceeeeeeceecCCCCcCCCCCCCCCCCCccEEEEEecCCCC-CCceEEEEc
Q psy11101 39 SNSRGKELQVFLFEQSMIFSE-AVGKKTQFSVNKMSVEEKVPEELTPAGSGGSRGGLSAYFLLKSIDPKK-PALTFLCQA 116 (157)
Q Consensus 39 ~~~k~keR~VFLFEq~lifsk-~~~~k~~~~~~~~~l~e~~~~~~~~~g~~~~~~gd~~kF~iw~~~~~~-~~~~~~LqA 116 (157)
...|+-.|+-|-|....||.= ..+...+-.+-.|.+.-++.. + ..|+ ++.+|.|....|.. +...|.|.|
T Consensus 15 ~~~K~~KrrwF~lk~~~L~YyK~kee~~~~p~i~lnl~gcev~---~---dv~~--~~~kf~I~l~~ps~~~~r~y~l~c 86 (106)
T cd01237 15 LTLKGYKQYWFTFRDTSISYYKSKEDSNGAPIGQLNLKGCEVT---P---DVNV--AQQKFHIKLLIPTAEGMNEVWLRC 86 (106)
T ss_pred hhhhhheeEEEEEeCCEEEEEccchhcCCCCeEEEecCceEEc---c---cccc--cccceEEEEecCCccCCeEEEEEC
Confidence 345666788888887777543 222211111233333332211 0 0111 24578888765542 234799999
Q ss_pred CChHHHHHHHHHHHH
Q psy11101 117 PTEESRSEWLRCLGL 131 (157)
Q Consensus 117 ~s~e~K~~Wv~~I~~ 131 (157)
.|++..+.|+...|-
T Consensus 87 dsEeqya~Wmaa~rl 101 (106)
T cd01237 87 DNEKQYAKWMAACRL 101 (106)
T ss_pred CCHHHHHHHHHHHHH
Confidence 999999999998764
No 58
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=80.45 E-value=3.8 Score=36.30 Aligned_cols=36 Identities=17% Similarity=0.231 Sum_probs=30.6
Q ss_pred CccEEEEEecCCCCCCceEEEEcCChHHHHHHHHHHHHHH
Q psy11101 94 LSAYFLLKSIDPKKPALTFLCQAPTEESRSEWLRCLGLIL 133 (157)
Q Consensus 94 d~~kF~iw~~~~~~~~~~~~LqA~s~e~K~~Wv~~I~~iL 133 (157)
.+..|.||.+. ..++.++|.|.+.++.|+..|+..|
T Consensus 441 ~~~~~~i~~~~----~~~~~~~~~~~~~~~~W~~~~~~~~ 476 (478)
T PTZ00267 441 HPNQLVLWFNN----GQKIIAYAKTAEDRDQWISKFQRAC 476 (478)
T ss_pred CCceEEEEecC----CcEEEEecCChHHHHHHHHHHHHHh
Confidence 45689999974 3489999999999999999998876
No 59
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=79.03 E-value=3.9 Score=36.67 Aligned_cols=36 Identities=19% Similarity=0.366 Sum_probs=30.3
Q ss_pred CccEEEEEecCCCCCCceEEEEcCChHHHHHHHHHHHHHH
Q psy11101 94 LSAYFLLKSIDPKKPALTFLCQAPTEESRSEWLRCLGLIL 133 (157)
Q Consensus 94 d~~kF~iw~~~~~~~~~~~~LqA~s~e~K~~Wv~~I~~iL 133 (157)
.+.-|++|++. +.+|..||.+.+.++.|+..|.+.|
T Consensus 454 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 489 (496)
T PTZ00283 454 AAHVFAVAFKT----GRRLLFQARSDPERDAWMQKIQSVL 489 (496)
T ss_pred CCcEEEEEecC----CcEEEEecCCchhHHHHHHHHHHhc
Confidence 56789999974 2489999999999999999987654
No 60
>PF15404 PH_4: Pleckstrin homology domain
Probab=78.83 E-value=5.8 Score=31.85 Aligned_cols=20 Identities=15% Similarity=0.473 Sum_probs=17.7
Q ss_pred eEEEEcCChHHHHHHHHHHH
Q psy11101 111 TFLCQAPTEESRSEWLRCLG 130 (157)
Q Consensus 111 ~~~LqA~s~e~K~~Wv~~I~ 130 (157)
+++..|.|--.|+.||-.|.
T Consensus 163 s~VF~ARSRqERD~WV~~I~ 182 (185)
T PF15404_consen 163 SMVFMARSRQERDLWVLAIN 182 (185)
T ss_pred EEEEEeccHHHHHHHHHHHH
Confidence 56889999999999998885
No 61
>cd01242 PH_ROK Rok (Rho- associated kinase) pleckstrin homology (PH) domain. Rok (Rho- associated kinase) pleckstrin homology (PH) domain. Rok is a serine/threonine kinase that binds GTP-rho. It consists of a kinase domain, a coiled coil region and a PH domain. The Rok PH domain is interrupted by a C1 domain. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=74.16 E-value=10 Score=28.26 Aligned_cols=39 Identities=18% Similarity=0.295 Sum_probs=30.8
Q ss_pred CCCCccEEEEEecCCCCCCceEEEEcCChHHHHHHHHHHHHH
Q psy11101 91 RGGLSAYFLLKSIDPKKPALTFLCQAPTEESRSEWLRCLGLI 132 (157)
Q Consensus 91 ~~gd~~kF~iw~~~~~~~~~~~~LqA~s~e~K~~Wv~~I~~i 132 (157)
..+-||-|.|.+... .....|=|.|.+.|+.||..+..-
T Consensus 71 ~kDiP~IF~I~~~~~---~~~lllLA~s~~ek~kWV~~L~~~ 109 (112)
T cd01242 71 AKEIPKIFQILYANE---ARDLLLLAPQTDEQNKWVSRLVKK 109 (112)
T ss_pred cccCCeEEEEEeCCc---cceEEEEeCCchHHHHHHHHHHHh
Confidence 445789999999632 246777899999999999988754
No 62
>cd01254 PH_PLD Phospholipase D (PLD) pleckstrin homology (PH) domain. Phospholipase D (PLD) pleckstrin homology (PH) domain. PLD hydrolyzes phosphatidylcholine to phosphatidic acid (PtdOH), which can bind target proteins. PLD contains a PH domain, a PX domain and four conserved PLD signature domains. The PLD PH domain is specific for bisphosphorylated inositides. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=72.22 E-value=11 Score=27.63 Aligned_cols=32 Identities=3% Similarity=0.138 Sum_probs=24.7
Q ss_pred ccEEEEEecCCCCCCceEEEEcCChHHHHHHHHHHHH
Q psy11101 95 SAYFLLKSIDPKKPALTFLCQAPTEESRSEWLRCLGL 131 (157)
Q Consensus 95 ~~kF~iw~~~~~~~~~~~~LqA~s~e~K~~Wv~~I~~ 131 (157)
.+.|.|-.. . .+|.|.|.|....+.|+..|+.
T Consensus 89 ~~~~~i~t~--~---R~~~l~a~s~~~~~~Wi~~i~~ 120 (121)
T cd01254 89 RHGLKITNS--N---RSLKLKCKSSRKLKQWMASIED 120 (121)
T ss_pred ceEEEEEcC--C---cEEEEEeCCHHHHHHHHHHHHh
Confidence 345555443 2 4899999999999999998864
No 63
>cd01248 PH_PLC Phospholipase C (PLC) pleckstrin homology (PH) domain. Phospholipase C (PLC) pleckstrin homology (PH) domain. There are several isozymes of PLC (beta, gamma, delta, epsilon. zeta). While, PLC beta, gamma and delta all have N-terminal PH domains, lipid binding specificity is not conserved between them. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=71.97 E-value=9.9 Score=27.35 Aligned_cols=38 Identities=18% Similarity=0.195 Sum_probs=30.1
Q ss_pred CccEEEEEecCCCCCCceEEEEcCChHHHHHHHHHHHHH
Q psy11101 94 LSAYFLLKSIDPKKPALTFLCQAPTEESRSEWLRCLGLI 132 (157)
Q Consensus 94 d~~kF~iw~~~~~~~~~~~~LqA~s~e~K~~Wv~~I~~i 132 (157)
.++.|.|-+.... ......|=|+|.++.+.|+..|+.|
T Consensus 78 e~~~fTIiy~~~~-~~k~L~lVA~s~~~a~~W~~gL~~L 115 (115)
T cd01248 78 EERCFTIVYGTDL-NLKSLDLVAPSEEEAKTWVSGLRKL 115 (115)
T ss_pred cccEEEEEECCCC-CeeEEEEEECCHHHHHHHHHHHhhC
Confidence 4589999996532 3456888899999999999998753
No 64
>KOG0521|consensus
Probab=69.80 E-value=8.4 Score=37.28 Aligned_cols=37 Identities=27% Similarity=0.471 Sum_probs=30.8
Q ss_pred CccEEEEEecCCCCCCceEEEEcCChHHHHHHHHHHHHHHHH
Q psy11101 94 LSAYFLLKSIDPKKPALTFLCQAPTEESRSEWLRCLGLILQT 135 (157)
Q Consensus 94 d~~kF~iw~~~~~~~~~~~~LqA~s~e~K~~Wv~~I~~iL~~ 135 (157)
..++|+|.+ |++ +|+|||-+....+.|+..|......
T Consensus 334 rr~CF~iiS--~tk---s~~lQAes~~d~~~Wi~~i~nsi~s 370 (785)
T KOG0521|consen 334 RRFCFEIIS--PTK---SYLLQAESEKDCQDWISALQNSILS 370 (785)
T ss_pred ceeeEEEec--CCc---ceEEecCchhHHHHHHHHHHHHHHH
Confidence 446899888 454 8999999999999999999887643
No 65
>cd01243 PH_MRCK MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain. MRCK (myotonic dystrophy-related Cdc42-binding kinase) pleckstrin homology (PH) domain. MRCK consists of a serine/threonine kinase domain, a cysteine rich (C1) region, a PH domain and a p21 binding motif. It has been shown to promote cytoskeletal reorganization, which affects many biological processes. The MRCK PH domain is responsible for its targeting to cell to cell junctions. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or insertions in the N-terminus of the domain, which are not conserved across all PH domains.
Probab=64.86 E-value=26 Score=26.45 Aligned_cols=42 Identities=21% Similarity=0.393 Sum_probs=31.9
Q ss_pred CCCCccEEEEEecC--CCCCCceEEEEcCChHHHHHHHHHHHHH
Q psy11101 91 RGGLSAYFLLKSID--PKKPALTFLCQAPTEESRSEWLRCLGLI 132 (157)
Q Consensus 91 ~~gd~~kF~iw~~~--~~~~~~~~~LqA~s~e~K~~Wv~~I~~i 132 (157)
..+-||-|.|..+- +..+..+..+=|.|...|+.||.-+.++
T Consensus 75 ~kDiP~If~I~~~~~~~~~~~~~~~~lA~s~~eK~kWV~aL~~l 118 (122)
T cd01243 75 KKDIPCIFRVTTSQISASSSKCSTLMLADTEEEKSKWVGALSEL 118 (122)
T ss_pred cccCCeEEEEEEecccCCCCccEEEEEeCCchHHHHHHHHHHHH
Confidence 34578999998753 3334456667899999999999988876
No 66
>KOG3524|consensus
Probab=55.10 E-value=4.8 Score=38.64 Aligned_cols=86 Identities=10% Similarity=0.180 Sum_probs=52.9
Q ss_pred CCCCceeEEEeecceeEEEEeecC------------CCCce-eeeeeceecCCCCcCCCCCCCCCCCCccEEEEEecCCC
Q psy11101 40 NSRGKELQVFLFEQSMIFSEAVGK------------KTQFS-VNKMSVEEKVPEELTPAGSGGSRGGLSAYFLLKSIDPK 106 (157)
Q Consensus 40 ~~k~keR~VFLFEq~lifsk~~~~------------k~~~~-~~~~~l~e~~~~~~~~~g~~~~~~gd~~kF~iw~~~~~ 106 (157)
..+|-+.-.|||+++++||+..-+ ...|+ +.-|.|...-. -+.+.| ++++|..|.+..|.|.
T Consensus 607 ~~rg~~~~l~lf~dvlei~k~r~~~~~tF~S~hs~tr~p~KhI~li~LntIr~----V~dIrE-~~~cpnAF~lllr~~~ 681 (850)
T KOG3524|consen 607 LQRGAKMKLFLFHDVLEITKIRLARHASFASLHSRQRRPYKHIDLIQLNTIRS----VFDIRE-IAKCPNAFVLLLRHRD 681 (850)
T ss_pred cccccceeeehhhhHHHHHHHhHhhhccccCCCCCCCCcccceeeccHHHHHH----Hhhhhh-hccCccceEEEEeCch
Confidence 357889999999999999987521 01233 22233322111 122222 3457889999998776
Q ss_pred CCCc-eEEEEcCChH-HHHH-HHHHHH
Q psy11101 107 KPAL-TFLCQAPTEE-SRSE-WLRCLG 130 (157)
Q Consensus 107 ~~~~-~~~LqA~s~e-~K~~-Wv~~I~ 130 (157)
.... ..+.|.++.| .+.. |++.+=
T Consensus 682 EQ~~v~~~Fq~tdDE~p~e~~y~K~LC 708 (850)
T KOG3524|consen 682 EQGGIDTVFESNDDEDPSDMRYFKNLC 708 (850)
T ss_pred hhcCeeEEEEecccccchhhHHHHHHh
Confidence 6543 2234878877 6777 988664
No 67
>PF12814 Mcp5_PH: Meiotic cell cortex C-terminal pleckstrin homology; InterPro: IPR024774 This pleckstrin homology domain is found in eukaryotic proteins, including Mcp5, a fungal protein that anchors dynein at the cell cortex during the horsetail phase (prophase I) of meiosis. During prophase I of fission yeast all the telomeres become bundled at the spindle pole body and subsequently the nucleus undergoes a dynamic oscillation, resulting in elongated nuclear morphology known as "horsetail" nucleus. The pleckstrin homology domain is necessary for the cortical localisation of the Mcp5 protein during meiosis [].; GO: 0005515 protein binding, 0032065 cortical protein anchoring, 0005938 cell cortex
Probab=51.35 E-value=94 Score=22.71 Aligned_cols=106 Identities=17% Similarity=0.219 Sum_probs=54.0
Q ss_pred eeeccEEEEECCCCCCCCcCCCCceeEEEeec--ceeEEEEeecCCCCc---eeeeeec---eecCCCCcCCCCCCCCCC
Q psy11101 21 LMRGPLYCTETSVASSSSSNSRGKELQVFLFE--QSMIFSEAVGKKTQF---SVNKMSV---EEKVPEELTPAGSGGSRG 92 (157)
Q Consensus 21 L~qd~f~V~e~~~~~~~~~~~k~keR~VFLFE--q~lifsk~~~~k~~~---~~~~~~l---~e~~~~~~~~~g~~~~~~ 92 (157)
++.|++.---.+.+ +.....+++.|.++|=. ..|.-+......... +...+.+ .+..++...|-|... .
T Consensus 9 ~~~G~~l~Ky~r~~-~~~~~~~~h~R~fwv~~~~~~L~Ws~~~p~~~~~~~~~~~~i~I~~v~~V~~~~~~~~~~~~--~ 85 (123)
T PF12814_consen 9 LMIGEWLYKYTRKG-RSGISEKPHRRYFWVDPYTRTLYWSSSNPKSENPSESKAKSIRIESVTEVKDGNPSPPGLKK--P 85 (123)
T ss_pred hhcccEEEEEcccc-cCccCCCcEEEEEEEeCCCCEEEecCCCCCccccccccccceEEeeeEEecCCCCCCccccc--c
Confidence 45666665322211 11233577889988855 567766543211110 1111222 222222112223211 1
Q ss_pred CCccEEEEEecCCCCCCceEEEEcCChHHHHHHHHHHHHHHH
Q psy11101 93 GLSAYFLLKSIDPKKPALTFLCQAPTEESRSEWLRCLGLILQ 134 (157)
Q Consensus 93 gd~~kF~iw~~~~~~~~~~~~LqA~s~e~K~~Wv~~I~~iL~ 134 (157)
+ ..+.|-...+. .+..|-|+|.+..+.|++-|+-|++
T Consensus 86 -~-~~~si~i~t~~---R~L~l~a~s~~~~~~W~~aL~~L~~ 122 (123)
T PF12814_consen 86 -D-HNKSIIIVTPD---RSLDLTAPSRERHEIWFNALRYLLQ 122 (123)
T ss_pred -c-cceEEEEEcCC---eEEEEEeCCHHHHHHHHHHHHHHhh
Confidence 1 33444333322 3888999999999999999998874
No 68
>PRK15366 type III secretion system chaperone SsaE; Provisional
Probab=44.89 E-value=46 Score=23.28 Aligned_cols=35 Identities=17% Similarity=0.187 Sum_probs=27.2
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhccCchHHHhh
Q psy11101 118 TEESRSEWLRCLGLILQTQRDFLKAIQSPIAYQKE 152 (157)
Q Consensus 118 s~e~K~~Wv~~I~~iL~~Q~~~l~al~~Pi~yq~~ 152 (157)
+++--+.|+.+++.+-..-..-+...++|=+||+-
T Consensus 14 ~~~~a~~~i~~L~aa~~rL~~al~~P~sp~qYqq~ 48 (80)
T PRK15366 14 SREEAKGIILQLRAARKQLEENNGKLQDPQQYQQN 48 (80)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHH
Confidence 56666999999999866555667778888899863
No 69
>KOG4305|consensus
Probab=41.61 E-value=18 Score=36.11 Aligned_cols=33 Identities=18% Similarity=0.285 Sum_probs=25.3
Q ss_pred EEEEecCCCCCCceEEEEcCChHHHHHHHHHHHHH
Q psy11101 98 FLLKSIDPKKPALTFLCQAPTEESRSEWLRCLGLI 132 (157)
Q Consensus 98 F~iw~~~~~~~~~~~~LqA~s~e~K~~Wv~~I~~i 132 (157)
|-+...+ .....|+|.|.+...+++|+.+|.+-
T Consensus 653 ~~~~~~g--a~~~~ftly~~s~~~r~~w~ekI~~a 685 (1029)
T KOG4305|consen 653 FFLYLGG--ARGASFTLYAESLNGRDQWVEKIKQA 685 (1029)
T ss_pred hhheecc--ccceEEEeeccchHHhhhHHhhhhHH
Confidence 4444433 23358999999999999999999875
No 70
>KOG3723|consensus
Probab=39.58 E-value=44 Score=31.85 Aligned_cols=40 Identities=28% Similarity=0.617 Sum_probs=32.4
Q ss_pred CccEEEEEecCCCCCCceEEEEcCChHHHHHHHHHHHHHHHHHHH
Q psy11101 94 LSAYFLLKSIDPKKPALTFLCQAPTEESRSEWLRCLGLILQTQRD 138 (157)
Q Consensus 94 d~~kF~iw~~~~~~~~~~~~LqA~s~e~K~~Wv~~I~~iL~~Q~~ 138 (157)
-|..|||..-+ .+|+|+|.+.-.-+.|+.|+.=+..+-+.
T Consensus 802 lpKAFEIFTAD-----~T~ILKaKDeKNAEEWlqCL~IavAHa~~ 841 (851)
T KOG3723|consen 802 LPKAFEIFTAD-----KTYILKAKDEKNAEEWLQCLNIAVAHAKE 841 (851)
T ss_pred cchhhheeecC-----ceEEeecccccCHHHHHHHHHHHHHHHHH
Confidence 45689998854 47999999999999999999877665443
No 71
>cd01240 PH_beta-ARK Beta adrenergic receptor kinase 1(beta ARK1)(GRK2) pleckstrin homology (PH) domain. Beta adrenergic receptor kinase 1(beta ARK1)(GRK2) pleckstrin homology (PH) domain. Beta ARK1 is a G protein-coupled receptor kinase (GRK). It phosphorylates activated G-protein coupled receptors leading to the release of the previously bound heterotrimeric G protein agonist and thus signal termination. It consists of a domain found in regulators of G-protein signaling (RGS)(RH), a serine/threonine kinase domain and a C-terminal PH domain. The Beta-Ark 1 PH domain has an extended C-terminal helix, which mediates interactions with G beta gamma subunits. PH domains share little sequence conservation, but all have a common fold, which is electrostatically polarized. PH domains also have diverse functions. They are often involved in targeting proteins to the plasma membrane, but few display strong specificity in lipid binding. Any specificity is usually determined by loop regions or
Probab=38.56 E-value=90 Score=23.35 Aligned_cols=45 Identities=18% Similarity=0.189 Sum_probs=34.5
Q ss_pred CCCCccEEEEEecCCCCCCceEEEEcCChHHHHHHHHHHHHHHHHHHHHH
Q psy11101 91 RGGLSAYFLLKSIDPKKPALTFLCQAPTEESRSEWLRCLGLILQTQRDFL 140 (157)
Q Consensus 91 ~~gd~~kF~iw~~~~~~~~~~~~LqA~s~e~K~~Wv~~I~~iL~~Q~~~l 140 (157)
+.|+.| -.|..++ +..|+|++.+.-.=.+|..+|++.....+.++
T Consensus 61 iK~~~C-I~ik~k~----~~k~vlt~~d~i~l~qW~~elr~a~r~Sq~ll 105 (116)
T cd01240 61 IKEENC-ILLKIRD----EKKIVLTNSDEIELKQWKKELRDAHRESQQLL 105 (116)
T ss_pred eccCce-EEEEEcC----CceEEEecCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 355554 4455553 34899999999999999999999988777766
No 72
>PF14593 PH_3: PH domain; PDB: 1W1H_D 1W1D_A 1W1G_A 2VKI_A.
Probab=37.32 E-value=1.4e+02 Score=21.62 Aligned_cols=72 Identities=15% Similarity=0.314 Sum_probs=41.7
Q ss_pred CceeEEEeecc-eeEEEEeecC--CCCcee-eeeeceecCCCCcCCCCCCCCCCCCccEEEEEecCCCCCCceEEEEcCC
Q psy11101 43 GKELQVFLFEQ-SMIFSEAVGK--KTQFSV-NKMSVEEKVPEELTPAGSGGSRGGLSAYFLLKSIDPKKPALTFLCQAPT 118 (157)
Q Consensus 43 ~keR~VFLFEq-~lifsk~~~~--k~~~~~-~~~~l~e~~~~~~~~~g~~~~~~gd~~kF~iw~~~~~~~~~~~~LqA~s 118 (157)
.|.|+.-|-+. -+++.++... |..... .++..+. .+...|.|-..+ .+|.+..++
T Consensus 27 ~kkR~liLTd~PrL~Yvdp~~~~~KGeI~~~~~l~v~~----------------k~~~~F~I~tp~-----RtY~l~d~~ 85 (104)
T PF14593_consen 27 AKKRQLILTDGPRLFYVDPKKMVLKGEIPWSKELSVEV----------------KSFKTFFIHTPK-----RTYYLEDPE 85 (104)
T ss_dssp EEEEEEEEETTTEEEEEETTTTEEEEEE--STT-EEEE----------------CSSSEEEEEETT-----EEEEEE-TT
T ss_pred EEEEEEEEccCCEEEEEECCCCeECcEEecCCceEEEE----------------ccCCEEEEECCC-----cEEEEECCC
Confidence 36777777776 5666666532 111111 1222222 133589998852 489999866
Q ss_pred hHHHHHHHHHHHHHHHHH
Q psy11101 119 EESRSEWLRCLGLILQTQ 136 (157)
Q Consensus 119 ~e~K~~Wv~~I~~iL~~Q 136 (157)
.. -..|++.|.+++..+
T Consensus 86 ~~-A~~W~~~I~~~~~~~ 102 (104)
T PF14593_consen 86 GN-AQQWVEAIEEVKKQY 102 (104)
T ss_dssp S--HHHHHHHHHHHHHHH
T ss_pred CC-HHHHHHHHHHHHHHh
Confidence 65 556999999987554
No 73
>KOG3531|consensus
Probab=36.91 E-value=25 Score=34.69 Aligned_cols=100 Identities=13% Similarity=0.282 Sum_probs=63.9
Q ss_pred hhCCccChhcccceeeeccEEEEECCCCCCCCcCCCC-ceeEEEeecceeEEEEeecC-CCCce------eeeeeceecC
Q psy11101 7 LKGFDGKITAQGKLLMRGPLYCTETSVASSSSSNSRG-KELQVFLFEQSMIFSEAVGK-KTQFS------VNKMSVEEKV 78 (157)
Q Consensus 7 l~g~dg~l~~qG~LL~qd~f~V~e~~~~~~~~~~~k~-keR~VFLFEq~lifsk~~~~-k~~~~------~~~~~l~e~~ 78 (157)
|.|++-=+...-+++++|...-- .+|| ++|-.|||-.+++.+..--. .+.|. +. |.+++.
T Consensus 737 l~s~e~LV~p~rE~ir~g~llK~----------skkgLqqrmfFLfsdillytsk~~~~~~~fri~g~lP~~-l~~en~- 804 (1036)
T KOG3531|consen 737 LASIENLVHPGREFIRSGCLLKL----------SKKGLQQRMFFLFSDILLYTSKGPDVQKCFRINGDLPLT-LTMENS- 804 (1036)
T ss_pred hhccccccCcchhhhhcCCchhh----------ccccchhhhhhhhhhhheeccCCCChhheeEeccCCceE-eeeecc-
Confidence 33444445555566666666422 2333 68999999999999876532 23343 33 444443
Q ss_pred CCCcCCCCCCCCCCCCccEEEEEecCCCCCCceEEEEcCChHHHHHHHHHHHHHH
Q psy11101 79 PEELTPAGSGGSRGGLSAYFLLKSIDPKKPALTFLCQAPTEESRSEWLRCLGLIL 133 (157)
Q Consensus 79 ~~~~~~~g~~~~~~gd~~kF~iw~~~~~~~~~~~~LqA~s~e~K~~Wv~~I~~iL 133 (157)
++ .-+-|.+|.|.- .....+.-|++-+...+|.-+++.-|
T Consensus 805 en----------~~s~p~~~ti~~-----~qk~i~vsast~~~sk~~~~~r~~~i 844 (1036)
T KOG3531|consen 805 EN----------EWSVPHCFTISG-----AQKQIYVSASTRRESKKWEFDRRKAI 844 (1036)
T ss_pred cc----------cccCCceEEEec-----cceEEEEeccchhhhhhhhhccchhh
Confidence 22 233466787643 23577789999999999999888776
No 74
>PF15413 PH_11: Pleckstrin homology domain; PDB: 3MDB_D 3FEH_A 3LJU_X 3FM8_C.
Probab=34.55 E-value=61 Score=23.28 Aligned_cols=33 Identities=24% Similarity=0.350 Sum_probs=24.7
Q ss_pred CccEEEEEecCCCCCCceEEEEcCChHHHHHHHHHHHH
Q psy11101 94 LSAYFLLKSIDPKKPALTFLCQAPTEESRSEWLRCLGL 131 (157)
Q Consensus 94 d~~kF~iw~~~~~~~~~~~~LqA~s~e~K~~Wv~~I~~ 131 (157)
+.+.|.|-.. ..+|.|.|-|.+.+..|+..|.+
T Consensus 79 ~~~~~~i~T~-----~kt~~l~~~t~~d~~~Wi~aL~~ 111 (112)
T PF15413_consen 79 HLKVFSIFTP-----TKTFHLRCETREDRYDWIEALQE 111 (112)
T ss_dssp SSEEEEEE-S-----S-EEEEEESSHHHHHHHHHHHHH
T ss_pred CCCCcEEECC-----CcEEEEEECCHHHHHHHHHHHHh
Confidence 4467777332 24999999999999999998764
No 75
>PF15408 PH_7: Pleckstrin homology domain
Probab=29.97 E-value=63 Score=23.30 Aligned_cols=33 Identities=15% Similarity=0.398 Sum_probs=24.8
Q ss_pred cEEEEEecCCCCCCceEEEEcCChHHHHHHHHHHH
Q psy11101 96 AYFLLKSIDPKKPALTFLCQAPTEESRSEWLRCLG 130 (157)
Q Consensus 96 ~kF~iw~~~~~~~~~~~~LqA~s~e~K~~Wv~~I~ 130 (157)
..|.|...+|.+ +..-|-|+|.++.+.|+.-++
T Consensus 62 ~A~G~L~~~~~~--~~~~~FA~S~~~~~~Wi~~mN 94 (104)
T PF15408_consen 62 NAFGFLMYSPSR--RHVQCFASSKKVCQSWIQVMN 94 (104)
T ss_pred eEEEEEEecCCc--chhhhhhhHHHHHHHHHHHhc
Confidence 368777766654 467778999999999987553
No 76
>KOG3640|consensus
Probab=29.45 E-value=72 Score=31.98 Aligned_cols=33 Identities=27% Similarity=0.480 Sum_probs=28.8
Q ss_pred eEEEEcCChHHHHHHHHHHHHHHHHHHHHHHhccCch
Q psy11101 111 TFLCQAPTEESRSEWLRCLGLILQTQRDFLKAIQSPI 147 (157)
Q Consensus 111 ~~~LqA~s~e~K~~Wv~~I~~iL~~Q~~~l~al~~Pi 147 (157)
+.+|-|-|.+..+.|+..|.+.| ..|.+|+.||
T Consensus 1084 Rv~LaADTkeel~~Wls~iN~tL----~~LRsW~~~~ 1116 (1116)
T KOG3640|consen 1084 RVMLAADTKEELQSWLSAINDTL----KQLRSWRNPI 1116 (1116)
T ss_pred eeeeecccHHHHHHHHHHHHHHH----HHHHhcCCCC
Confidence 68889999999999999999988 4577888875
No 77
>KOG0088|consensus
Probab=25.31 E-value=86 Score=25.31 Aligned_cols=36 Identities=11% Similarity=0.161 Sum_probs=24.0
Q ss_pred EEecCCCCCCceEEEEcCChHHH-HHHHHHHHHHHHH
Q psy11101 100 LKSIDPKKPALTFLCQAPTEESR-SEWLRCLGLILQT 135 (157)
Q Consensus 100 iw~~~~~~~~~~~~LqA~s~e~K-~~Wv~~I~~iL~~ 135 (157)
|.+|+.++.-.+|-+--.+...| ..||.+||++|-+
T Consensus 81 IYYRgSnGalLVyDITDrdSFqKVKnWV~Elr~mlGn 117 (218)
T KOG0088|consen 81 IYYRGSNGALLVYDITDRDSFQKVKNWVLELRTMLGN 117 (218)
T ss_pred eEEeCCCceEEEEeccchHHHHHHHHHHHHHHHHhCC
Confidence 56677666656666654444444 4699999998754
No 78
>KOG2059|consensus
Probab=25.01 E-value=1.4e+02 Score=29.14 Aligned_cols=79 Identities=19% Similarity=0.296 Sum_probs=57.8
Q ss_pred CCCceeEEEeecceeEEEEeecCCCCce--eeeeeceecCCCCcCCCCCCCCCCCCccEEEEEecCCCCCCceEEEEcCC
Q psy11101 41 SRGKELQVFLFEQSMIFSEAVGKKTQFS--VNKMSVEEKVPEELTPAGSGGSRGGLSAYFLLKSIDPKKPALTFLCQAPT 118 (157)
Q Consensus 41 ~k~keR~VFLFEq~lifsk~~~~k~~~~--~~~~~l~e~~~~~~~~~g~~~~~~gd~~kF~iw~~~~~~~~~~~~LqA~s 118 (157)
+-.|.|++=|=-..+.|+|......-|+ ++.|.--|-+++ + +=+.+.-|.|-..+ + +-.+||++
T Consensus 584 ~~FKKryf~LT~~~Ls~~Ksp~~q~~~~Ipl~nI~avEklee-----~----sF~~knv~qVV~~d--r---tly~Q~~n 649 (800)
T KOG2059|consen 584 KNFKKRYFRLTTEELSYAKSPGKQPIYTIPLSNIRAVEKLEE-----K----SFKMKNVFQVVHTD--R---TLYVQAKN 649 (800)
T ss_pred hhhhheEEEeccceeEEecCCccCcccceeHHHHHHHHHhhh-----h----ccCCCceEEEEecC--c---ceeEecCC
Confidence 4457899999999999999887766554 555555554432 1 11234689888876 2 56679999
Q ss_pred hHHHHHHHHHHHHHH
Q psy11101 119 EESRSEWLRCLGLIL 133 (157)
Q Consensus 119 ~e~K~~Wv~~I~~iL 133 (157)
...-..|++.|+.+-
T Consensus 650 ~vEandWldaL~kvs 664 (800)
T KOG2059|consen 650 CVEANDWLDALRKVS 664 (800)
T ss_pred chHHHHHHHHHHHHh
Confidence 999999999998864
No 79
>KOG4269|consensus
Probab=24.99 E-value=24 Score=34.94 Aligned_cols=36 Identities=22% Similarity=0.397 Sum_probs=25.6
Q ss_pred eeeccEEEEECCCCCCCCcCCCCceeEEEeecceeEEEEeecCC
Q psy11101 21 LMRGPLYCTETSVASSSSSNSRGKELQVFLFEQSMIFSEAVGKK 64 (157)
Q Consensus 21 L~qd~f~V~e~~~~~~~~~~~k~keR~VFLFEq~lifsk~~~~k 64 (157)
+++|.|.|--.. ...+-||||||++.++.+|....+
T Consensus 555 ~L~d~f~~~v~~--------~~~~~~~~~~~~~~ll~tk~~~~k 590 (1112)
T KOG4269|consen 555 LLKDVFFVEVEE--------AQRKLRHVFLFTNSLLCTKLKKLK 590 (1112)
T ss_pred hhhhheeecccc--------ccccchhhHHHhhccchhhhhhhc
Confidence 467888874221 123579999999999999876543
No 80
>PF15277 Sec3-PIP2_bind: Exocyst complex component SEC3 N-terminal PIP2 binding PH; PDB: 3HIE_D 3A58_E.
Probab=21.76 E-value=2.9e+02 Score=19.26 Aligned_cols=33 Identities=15% Similarity=0.275 Sum_probs=28.0
Q ss_pred ccEEEEEecCCCCCCceEEEEcCChHHHHHHHHHHHHHH
Q psy11101 95 SAYFLLKSIDPKKPALTFLCQAPTEESRSEWLRCLGLIL 133 (157)
Q Consensus 95 ~~kF~iw~~~~~~~~~~~~LqA~s~e~K~~Wv~~I~~iL 133 (157)
...|.|.+.. .|-.+|.|...|...+..|-++-
T Consensus 56 ~~~F~l~~~k------~y~W~a~s~~Ek~~Fi~~L~k~~ 88 (91)
T PF15277_consen 56 TPEFDLTFDK------PYYWEASSAKEKNTFIRSLWKLY 88 (91)
T ss_dssp TTEEEEESSS------EEEEEESSHHHHHHHHHHHHHHH
T ss_pred CcCEEEEECC------CcEEEeCCHHHHHHHHHHHHHHh
Confidence 3589999853 89999999999999999887764
No 81
>PF07875 Coat_F: Coat F domain; InterPro: IPR012851 The Coat F proteins contribute to the Bacillales spore coat. They occur multiple times in the genomes in which they are found. Bacillus subtilis endospore protein coats protect them and may play a role in their germination []. Spore coat protein F, on the outer surface of the endospore, is one of a suite of proteins that could be used to differentiate between members of the Bacillus genus [].
Probab=21.12 E-value=79 Score=20.30 Aligned_cols=31 Identities=19% Similarity=0.123 Sum_probs=25.9
Q ss_pred eEEEEcCChHHHHHHHHHHHHHHHHHHHHHH
Q psy11101 111 TFLCQAPTEESRSEWLRCLGLILQTQRDFLK 141 (157)
Q Consensus 111 ~~~LqA~s~e~K~~Wv~~I~~iL~~Q~~~l~ 141 (157)
..++.|++|++|+.....+.+.+..|....+
T Consensus 22 ~a~~E~~np~lR~~l~~~~~~~~~~~~~l~~ 52 (64)
T PF07875_consen 22 TAALECANPELRQILQQILNECQQMQYELFN 52 (64)
T ss_pred HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456789999999999999999998887654
No 82
>TIGR02501 type_III_yscE type III secretion system protein, YseE family. Members of this family are found exclusively in type III secretion appparatus gene clusters in bacteria. Those bacteria with a protein from this family tend to target animal cells, as does Yersinia pestis. This protein is small (about 70 amino acids) and not well characterized.
Probab=20.94 E-value=1.9e+02 Score=19.31 Aligned_cols=31 Identities=19% Similarity=0.229 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCchHHHh
Q psy11101 121 SRSEWLRCLGLILQTQRDFLKAIQSPIAYQK 151 (157)
Q Consensus 121 ~K~~Wv~~I~~iL~~Q~~~l~al~~Pi~yq~ 151 (157)
..++|...+.+.+..=..-|.--++|-.||.
T Consensus 14 ~~~~~~~~L~~a~~~lk~qL~~~~tp~qYq~ 44 (67)
T TIGR02501 14 AARAIIEQLEAALAELKEQLSRGGDPQQYQE 44 (67)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 4888988888876655566677889999986
No 83
>KOG3551|consensus
Probab=20.59 E-value=1.7e+02 Score=26.74 Aligned_cols=36 Identities=14% Similarity=0.223 Sum_probs=29.4
Q ss_pred CCccEEEEEecCCCCCCceEEEEcCChHHHHHHHHHHHH
Q psy11101 93 GLSAYFLLKSIDPKKPALTFLCQAPTEESRSEWLRCLGL 131 (157)
Q Consensus 93 gd~~kF~iw~~~~~~~~~~~~LqA~s~e~K~~Wv~~I~~ 131 (157)
..++.|||.+.+ ..++.+|.|.+.+.-+.|...|..
T Consensus 234 pEnR~lEihSpd---g~~tliLR~kdsa~A~~Wf~AiHa 269 (506)
T KOG3551|consen 234 PENRQLEIHSPD---GRHTLILRAKDSAEADSWFEAIHA 269 (506)
T ss_pred cccceeeeeCCC---CcceEEEEccCcHHHHHHHHHHHH
Confidence 355789998875 346899999999999999987754
Done!