Query psy11102
Match_columns 87
No_of_seqs 93 out of 95
Neff 6.2
Searched_HMMs 29240
Date Fri Aug 16 18:02:37 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11102.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11102hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3mkq_A Coatomer beta'-subunit; 99.2 8.3E-11 2.8E-15 90.4 10.6 82 3-85 682-763 (814)
2 1b89_A Protein (clathrin heavy 98.5 1.5E-07 5.2E-12 72.9 5.4 54 2-85 135-191 (449)
3 3mkq_A Coatomer beta'-subunit; 98.5 6.8E-07 2.3E-11 68.7 8.8 85 2-87 694-778 (814)
4 1xi4_A Clathrin heavy chain; a 97.7 0.00018 6E-09 62.8 9.5 75 2-77 1062-1137(1630)
5 3mkq_B Coatomer subunit alpha; 97.5 0.00064 2.2E-08 46.8 8.4 79 3-82 35-113 (177)
6 3mkq_B Coatomer subunit alpha; 97.5 0.0011 3.8E-08 45.6 9.3 84 2-87 47-131 (177)
7 1xi4_A Clathrin heavy chain; a 97.4 0.00047 1.6E-08 60.2 8.5 80 3-84 1148-1234(1630)
8 3upv_A Heat shock protein STI1 97.4 0.0012 4.2E-08 39.5 7.6 70 2-71 17-98 (126)
9 3rkv_A Putative peptidylprolyl 97.4 0.0011 3.8E-08 41.6 7.6 70 2-71 24-123 (162)
10 1b89_A Protein (clathrin heavy 97.3 0.00011 3.6E-09 57.0 2.2 81 2-84 74-161 (449)
11 4gco_A Protein STI-1; structur 97.2 0.0021 7E-08 39.8 7.6 70 2-71 26-107 (126)
12 1elw_A TPR1-domain of HOP; HOP 97.2 0.0028 9.6E-08 36.2 7.6 70 2-71 17-98 (118)
13 2xev_A YBGF; tetratricopeptide 97.2 0.0038 1.3E-07 37.0 8.3 70 2-71 15-102 (129)
14 3sz7_A HSC70 cochaperone (SGT) 97.1 0.0032 1.1E-07 39.5 7.6 70 2-71 24-105 (164)
15 3gyz_A Chaperone protein IPGC; 97.1 0.0038 1.3E-07 40.4 8.0 69 2-70 49-129 (151)
16 3q49_B STIP1 homology and U bo 97.1 0.0059 2E-07 36.5 8.3 70 2-71 22-103 (137)
17 3k9i_A BH0479 protein; putativ 97.0 0.00078 2.7E-08 40.5 4.1 70 2-71 3-87 (117)
18 3urz_A Uncharacterized protein 97.0 0.0019 6.6E-08 42.6 6.2 70 2-71 17-114 (208)
19 2fo7_A Synthetic consensus TPR 97.0 0.0061 2.1E-07 35.1 7.8 66 3-68 15-92 (136)
20 2vyi_A SGTA protein; chaperone 97.0 0.0057 2E-07 35.4 7.6 70 2-71 25-106 (131)
21 1na0_A Designed protein CTPR3; 97.0 0.0088 3E-07 34.2 8.3 70 2-71 22-103 (125)
22 4ga2_A E3 SUMO-protein ligase 97.0 0.0045 1.5E-07 39.0 7.5 69 2-70 10-90 (150)
23 2dba_A Smooth muscle cell asso 97.0 0.0042 1.4E-07 37.2 7.0 70 2-71 41-125 (148)
24 2xcb_A PCRH, regulatory protei 96.9 0.0071 2.4E-07 37.3 8.1 70 2-71 31-112 (142)
25 4gcn_A Protein STI-1; structur 96.9 0.0042 1.4E-07 38.2 6.8 70 2-71 21-109 (127)
26 2fbn_A 70 kDa peptidylprolyl i 96.9 0.0043 1.5E-07 40.1 7.0 70 2-71 51-148 (198)
27 1a17_A Serine/threonine protei 96.9 0.0099 3.4E-07 36.2 8.3 70 2-71 26-107 (166)
28 2lni_A Stress-induced-phosphop 96.8 0.0055 1.9E-07 35.8 6.3 70 2-71 29-110 (133)
29 3u4t_A TPR repeat-containing p 96.7 0.01 3.5E-07 39.1 8.2 66 3-68 17-97 (272)
30 2vgx_A Chaperone SYCD; alterna 96.7 0.012 4E-07 37.2 8.1 70 2-71 34-115 (148)
31 2kck_A TPR repeat; tetratricop 96.7 0.0098 3.3E-07 33.6 7.0 70 2-71 19-103 (112)
32 3vtx_A MAMA; tetratricopeptide 96.7 0.011 3.7E-07 37.2 7.6 68 3-70 87-166 (184)
33 1hh8_A P67PHOX, NCF-2, neutrop 96.6 0.012 4E-07 37.7 7.7 69 2-70 19-96 (213)
34 1xnf_A Lipoprotein NLPI; TPR, 96.6 0.015 5E-07 38.2 8.1 70 2-71 56-137 (275)
35 2gw1_A Mitochondrial precursor 96.6 0.0096 3.3E-07 42.5 7.5 70 2-71 19-99 (514)
36 3as5_A MAMA; tetratricopeptide 96.5 0.024 8.2E-07 34.5 8.3 67 3-69 56-134 (186)
37 1xnf_A Lipoprotein NLPI; TPR, 96.5 0.018 6E-07 37.8 8.0 69 2-70 18-102 (275)
38 3uq3_A Heat shock protein STI1 96.5 0.016 5.3E-07 37.5 7.6 69 3-71 153-233 (258)
39 3hym_B Cell division cycle pro 96.5 0.015 5.2E-07 38.9 7.7 71 2-72 206-297 (330)
40 1elr_A TPR2A-domain of HOP; HO 96.5 0.01 3.5E-07 34.3 6.1 70 2-71 17-105 (131)
41 4ga2_A E3 SUMO-protein ligase 96.5 0.0075 2.6E-07 38.0 5.8 68 2-69 44-123 (150)
42 4i17_A Hypothetical protein; T 96.4 0.017 5.8E-07 37.6 7.6 69 3-71 56-143 (228)
43 4i17_A Hypothetical protein; T 96.4 0.0078 2.7E-07 39.3 5.8 69 2-70 20-101 (228)
44 1ihg_A Cyclophilin 40; ppiase 96.4 0.013 4.5E-07 42.7 7.6 70 2-71 236-333 (370)
45 3uq3_A Heat shock protein STI1 96.4 0.02 6.7E-07 37.0 7.6 51 20-70 144-198 (258)
46 1p5q_A FKBP52, FK506-binding p 96.4 0.015 5.1E-07 41.5 7.5 70 2-71 160-256 (336)
47 1hh8_A P67PHOX, NCF-2, neutrop 96.4 0.037 1.3E-06 35.3 8.8 70 2-71 50-147 (213)
48 3ieg_A DNAJ homolog subfamily 96.4 0.019 6.5E-07 38.7 7.6 70 2-71 247-332 (359)
49 3as5_A MAMA; tetratricopeptide 96.3 0.035 1.2E-06 33.8 8.2 70 2-71 89-170 (186)
50 2vq2_A PILW, putative fimbrial 96.3 0.025 8.6E-07 35.7 7.8 49 21-69 119-171 (225)
51 2fo7_A Synthetic consensus TPR 96.3 0.028 9.6E-07 32.2 7.4 70 2-71 48-129 (136)
52 2e2e_A Formate-dependent nitri 96.3 0.024 8.2E-07 35.6 7.5 70 2-71 57-141 (177)
53 2pl2_A Hypothetical conserved 96.3 0.01 3.6E-07 39.2 6.1 50 21-70 157-210 (217)
54 2ho1_A Type 4 fimbrial biogene 96.3 0.039 1.3E-06 35.9 8.8 48 21-68 147-198 (252)
55 3vtx_A MAMA; tetratricopeptide 96.2 0.03 1E-06 35.1 7.6 67 2-68 18-96 (184)
56 3hym_B Cell division cycle pro 96.2 0.037 1.3E-06 37.0 8.5 69 2-70 35-116 (330)
57 2c2l_A CHIP, carboxy terminus 96.2 0.012 4.2E-07 40.7 6.1 70 2-71 17-98 (281)
58 2xpi_A Anaphase-promoting comp 96.1 0.044 1.5E-06 40.2 9.2 48 21-68 123-173 (597)
59 3u4t_A TPR repeat-containing p 96.1 0.05 1.7E-06 35.7 8.6 71 2-72 50-135 (272)
60 3cv0_A Peroxisome targeting si 96.1 0.043 1.5E-06 36.6 8.3 69 2-70 34-114 (327)
61 2q7f_A YRRB protein; TPR, prot 96.0 0.021 7.2E-07 36.7 6.4 48 21-68 131-182 (243)
62 2xpi_A Anaphase-promoting comp 96.0 0.032 1.1E-06 41.0 8.0 70 2-71 130-226 (597)
63 3cv0_A Peroxisome targeting si 96.0 0.037 1.3E-06 37.0 7.7 69 2-70 151-231 (327)
64 1kt0_A FKBP51, 51 kDa FK506-bi 95.9 0.031 1.1E-06 41.5 7.6 70 2-71 281-377 (457)
65 2if4_A ATFKBP42; FKBP-like, al 95.9 0.02 6.7E-07 41.0 6.2 72 2-73 192-292 (338)
66 4eqf_A PEX5-related protein; a 95.9 0.037 1.3E-06 38.3 7.5 69 2-70 78-158 (365)
67 3fp2_A TPR repeat-containing p 95.8 0.052 1.8E-06 39.1 8.3 69 2-70 323-403 (537)
68 1wao_1 Serine/threonine protei 95.8 0.031 1.1E-06 42.0 7.1 70 2-71 19-100 (477)
69 4eqf_A PEX5-related protein; a 95.8 0.054 1.9E-06 37.4 7.9 69 2-70 190-272 (365)
70 2ho1_A Type 4 fimbrial biogene 95.8 0.074 2.5E-06 34.5 8.2 70 2-71 154-235 (252)
71 3upv_A Heat shock protein STI1 95.8 0.071 2.4E-06 31.5 7.5 57 5-70 7-63 (126)
72 2q7f_A YRRB protein; TPR, prot 95.7 0.064 2.2E-06 34.4 7.6 69 2-70 70-150 (243)
73 1qqe_A Vesicular transport pro 95.7 0.07 2.4E-06 36.7 8.2 62 4-71 32-103 (292)
74 3ma5_A Tetratricopeptide repea 95.7 0.099 3.4E-06 30.4 7.9 54 9-71 14-67 (100)
75 2y4t_A DNAJ homolog subfamily 95.7 0.05 1.7E-06 38.4 7.6 70 2-71 39-120 (450)
76 1fch_A Peroxisomal targeting s 95.7 0.056 1.9E-06 37.0 7.6 68 3-70 195-276 (368)
77 2ifu_A Gamma-SNAP; membrane fu 95.7 0.053 1.8E-06 37.6 7.6 24 46-69 77-100 (307)
78 1fch_A Peroxisomal targeting s 95.7 0.057 2E-06 36.9 7.6 69 2-70 77-157 (368)
79 2l6j_A TPR repeat-containing p 95.7 0.078 2.7E-06 30.1 7.1 54 9-71 11-64 (111)
80 2y4t_A DNAJ homolog subfamily 95.7 0.06 2.1E-06 38.0 7.9 70 2-71 270-355 (450)
81 3ieg_A DNAJ homolog subfamily 95.7 0.058 2E-06 36.3 7.5 48 22-69 127-178 (359)
82 1hxi_A PEX5, peroxisome target 95.6 0.018 6.2E-07 35.0 4.5 50 21-70 57-110 (121)
83 2vq2_A PILW, putative fimbrial 95.6 0.073 2.5E-06 33.5 7.6 50 21-70 48-102 (225)
84 4gco_A Protein STI-1; structur 95.6 0.08 2.7E-06 32.4 7.5 50 12-70 23-72 (126)
85 1w3b_A UDP-N-acetylglucosamine 95.4 0.052 1.8E-06 37.9 6.8 66 3-68 251-328 (388)
86 1na3_A Designed protein CTPR2; 95.4 0.14 4.7E-06 28.0 7.5 31 41-71 39-69 (91)
87 2pl2_A Hypothetical conserved 95.4 0.025 8.6E-07 37.3 4.7 69 2-70 18-109 (217)
88 1qqe_A Vesicular transport pro 95.3 0.15 5.3E-06 34.9 9.0 70 3-72 132-226 (292)
89 1w3b_A UDP-N-acetylglucosamine 95.3 0.049 1.7E-06 38.1 6.4 67 3-69 81-159 (388)
90 4gyw_A UDP-N-acetylglucosamine 95.2 0.053 1.8E-06 43.5 6.8 69 2-70 22-102 (723)
91 2vsy_A XCC0866; transferase, g 95.1 0.095 3.3E-06 39.2 7.7 68 3-70 37-116 (568)
92 2vsy_A XCC0866; transferase, g 95.1 0.045 1.6E-06 41.0 5.9 70 1-70 1-82 (568)
93 2kck_A TPR repeat; tetratricop 95.0 0.094 3.2E-06 29.3 6.0 56 7-71 11-66 (112)
94 3nf1_A KLC 1, kinesin light ch 95.0 0.05 1.7E-06 36.0 5.4 70 2-71 40-137 (311)
95 2kc7_A BFR218_protein; tetratr 95.0 0.12 4.1E-06 29.2 6.4 53 10-71 8-61 (99)
96 4gcn_A Protein STI-1; structur 94.9 0.18 6E-06 30.6 7.5 50 12-70 18-67 (127)
97 3sz7_A HSC70 cochaperone (SGT) 94.9 0.17 5.7E-06 31.4 7.4 54 8-70 17-70 (164)
98 1elr_A TPR2A-domain of HOP; HO 94.9 0.16 5.6E-06 29.0 6.9 58 5-71 7-64 (131)
99 3edt_B KLC 2, kinesin light ch 94.9 0.06 2E-06 34.9 5.4 71 2-72 98-196 (283)
100 2xcb_A PCRH, regulatory protei 94.8 0.19 6.4E-06 30.6 7.5 48 23-70 26-77 (142)
101 3edt_B KLC 2, kinesin light ch 94.7 0.058 2E-06 35.0 5.1 70 2-71 56-153 (283)
102 3qky_A Outer membrane assembly 94.7 0.12 4.2E-06 34.3 6.8 22 49-70 152-173 (261)
103 2yhc_A BAMD, UPF0169 lipoprote 94.7 0.18 6E-06 33.2 7.5 55 2-56 17-89 (225)
104 4abn_A Tetratricopeptide repea 94.6 0.062 2.1E-06 40.0 5.6 82 3-85 235-331 (474)
105 1elw_A TPR1-domain of HOP; HOP 94.6 0.22 7.5E-06 27.9 6.9 56 6-70 8-63 (118)
106 1na0_A Designed protein CTPR3; 94.6 0.3 1E-05 27.4 7.5 54 8-70 15-68 (125)
107 2xev_A YBGF; tetratricopeptide 94.5 0.32 1.1E-05 28.2 7.6 54 9-71 9-65 (129)
108 3qww_A SET and MYND domain-con 94.5 0.17 6E-06 38.2 7.9 73 3-75 312-412 (433)
109 3nf1_A KLC 1, kinesin light ch 94.5 0.067 2.3E-06 35.4 5.0 39 2-40 166-220 (311)
110 2vgx_A Chaperone SYCD; alterna 94.4 0.26 9E-06 30.7 7.5 48 23-70 29-80 (148)
111 3ro2_A PINS homolog, G-protein 94.4 0.092 3.2E-06 34.6 5.5 70 2-71 18-109 (338)
112 2hr2_A Hypothetical protein; a 94.3 0.15 5.2E-06 34.0 6.5 69 3-71 25-128 (159)
113 3q49_B STIP1 homology and U bo 94.2 0.35 1.2E-05 28.4 7.5 57 5-70 12-68 (137)
114 2kat_A Uncharacterized protein 94.2 0.27 9.4E-06 28.5 6.9 52 20-71 24-79 (115)
115 4gyw_A UDP-N-acetylglucosamine 94.2 0.17 5.9E-06 40.5 7.6 70 2-71 56-137 (723)
116 2vyi_A SGTA protein; chaperone 94.2 0.39 1.3E-05 27.2 7.5 53 9-70 19-71 (131)
117 3ro3_A PINS homolog, G-protein 94.1 0.14 4.8E-06 30.1 5.5 69 2-70 22-114 (164)
118 2lni_A Stress-induced-phosphop 94.1 0.22 7.6E-06 28.7 6.2 55 6-69 20-74 (133)
119 3qwp_A SET and MYND domain-con 94.0 0.27 9.2E-06 36.9 8.0 73 2-74 300-400 (429)
120 3urz_A Uncharacterized protein 94.0 0.25 8.7E-06 32.1 7.0 59 2-60 67-137 (208)
121 3fp2_A TPR repeat-containing p 93.9 0.28 9.5E-06 35.2 7.6 68 2-69 289-368 (537)
122 3gyz_A Chaperone protein IPGC; 93.9 0.36 1.2E-05 30.8 7.5 48 23-70 44-95 (151)
123 2r5s_A Uncharacterized protein 93.8 0.37 1.2E-05 30.3 7.4 40 31-70 94-133 (176)
124 1hxi_A PEX5, peroxisome target 93.7 0.46 1.6E-05 28.5 7.3 36 36-71 42-77 (121)
125 3qky_A Outer membrane assembly 93.6 0.17 5.7E-06 33.6 5.7 69 2-70 28-122 (261)
126 2ifu_A Gamma-SNAP; membrane fu 93.5 0.26 9E-06 34.0 6.8 23 47-69 157-179 (307)
127 2gw1_A Mitochondrial precursor 93.5 0.23 8E-06 35.2 6.6 51 20-70 417-474 (514)
128 2l6j_A TPR repeat-containing p 93.5 0.01 3.4E-07 34.0 -0.6 67 2-68 17-101 (111)
129 4a1s_A PINS, partner of inscut 93.3 0.17 5.8E-06 35.2 5.5 70 2-71 61-152 (411)
130 3ro3_A PINS homolog, G-protein 93.3 0.18 6.2E-06 29.6 4.9 69 2-70 62-154 (164)
131 2pzi_A Probable serine/threoni 93.2 0.27 9.2E-06 38.4 7.0 70 2-71 404-493 (681)
132 3ro2_A PINS homolog, G-protein 93.2 0.27 9.3E-06 32.3 6.1 68 3-70 197-288 (338)
133 3q15_A PSP28, response regulat 93.2 0.25 8.4E-06 34.8 6.2 68 3-70 196-286 (378)
134 3n71_A Histone lysine methyltr 93.2 0.38 1.3E-05 36.9 7.7 74 2-75 322-423 (490)
135 1a17_A Serine/threonine protei 93.1 0.66 2.3E-05 27.7 7.4 51 20-70 18-72 (166)
136 2dba_A Smooth muscle cell asso 93.0 0.41 1.4E-05 28.1 6.2 56 6-70 32-90 (148)
137 3mkr_A Coatomer subunit epsilo 93.0 0.59 2E-05 32.4 7.8 45 21-65 206-254 (291)
138 3u3w_A Transcriptional activat 92.9 0.7 2.4E-05 31.4 8.1 70 2-71 88-181 (293)
139 3sf4_A G-protein-signaling mod 92.9 0.28 9.5E-06 33.6 6.1 68 3-70 201-292 (406)
140 2qfc_A PLCR protein; TPR, HTH, 92.9 0.75 2.6E-05 31.2 8.2 69 3-71 129-222 (293)
141 4g1t_A Interferon-induced prot 92.8 0.42 1.4E-05 33.9 7.1 70 2-71 64-164 (472)
142 4a1s_A PINS, partner of inscut 92.7 0.31 1.1E-05 33.9 6.1 66 5-70 199-288 (411)
143 3ulq_A Response regulator aspa 92.7 0.33 1.1E-05 34.0 6.3 70 2-71 197-290 (383)
144 3sf4_A G-protein-signaling mod 92.6 0.18 6E-06 34.6 4.7 70 2-71 22-113 (406)
145 2pzi_A Probable serine/threoni 92.6 0.28 9.5E-06 38.3 6.3 70 2-72 480-561 (681)
146 3ulq_A Response regulator aspa 92.5 0.41 1.4E-05 33.5 6.5 35 3-37 238-286 (383)
147 3mkr_A Coatomer subunit epsilo 92.3 1 3.4E-05 31.2 8.3 43 24-67 110-152 (291)
148 3u3w_A Transcriptional activat 92.1 0.58 2E-05 31.8 6.8 68 3-70 129-221 (293)
149 2ond_A Cleavage stimulation fa 92.1 1.1 3.9E-05 30.6 8.4 66 5-70 80-159 (308)
150 2fbn_A 70 kDa peptidylprolyl i 92.0 1.2 4E-05 28.3 7.9 25 46-70 89-113 (198)
151 3gw4_A Uncharacterized protein 92.0 1.2 4.1E-05 27.5 7.7 68 3-70 40-132 (203)
152 1pgy_A SWA2P; UBA, ubiquitin, 91.9 0.075 2.6E-06 29.1 1.6 23 4-26 20-42 (47)
153 1ouv_A Conserved hypothetical 91.8 0.62 2.1E-05 30.8 6.6 24 46-69 75-102 (273)
154 2ond_A Cleavage stimulation fa 91.7 1 3.5E-05 30.8 7.7 30 42-71 200-229 (308)
155 4abn_A Tetratricopeptide repea 91.7 0.37 1.3E-05 35.7 5.8 69 3-71 193-284 (474)
156 2yhc_A BAMD, UPF0169 lipoprote 91.4 1.1 3.8E-05 29.2 7.4 51 20-70 152-209 (225)
157 3q15_A PSP28, response regulat 91.4 1.8 6.3E-05 30.2 8.9 37 3-39 236-285 (378)
158 1na3_A Designed protein CTPR2; 91.3 0.76 2.6E-05 24.8 5.6 57 2-58 22-90 (91)
159 1ouv_A Conserved hypothetical 91.2 0.58 2E-05 31.0 5.9 69 2-70 55-139 (273)
160 3qou_A Protein YBBN; thioredox 91.0 1.2 4.2E-05 30.5 7.6 29 42-70 216-244 (287)
161 4g1t_A Interferon-induced prot 90.6 0.28 9.5E-06 34.9 4.1 31 42-72 427-457 (472)
162 2r5s_A Uncharacterized protein 90.3 0.71 2.4E-05 28.9 5.5 28 44-71 39-66 (176)
163 2e2e_A Formate-dependent nitri 90.0 1.1 3.6E-05 27.7 6.0 68 3-70 24-106 (177)
164 2qx5_A Nucleoporin NIC96; mRNA 89.9 2.1 7.3E-05 34.4 9.0 82 2-83 369-481 (661)
165 4f3v_A ESX-1 secretion system 89.3 0.96 3.3E-05 32.6 6.0 48 24-71 144-197 (282)
166 2c2l_A CHIP, carboxy terminus 89.2 2 6.9E-05 29.3 7.5 55 7-70 9-63 (281)
167 2qfc_A PLCR protein; TPR, HTH, 89.1 2.5 8.6E-05 28.5 7.8 49 23-71 123-181 (293)
168 2kc7_A BFR218_protein; tetratr 88.9 0.81 2.8E-05 25.5 4.5 63 2-72 13-88 (99)
169 4b4t_Q 26S proteasome regulato 88.8 0.31 1.1E-05 34.2 3.1 68 2-69 17-119 (434)
170 4b4t_Q 26S proteasome regulato 88.7 1.3 4.4E-05 31.0 6.2 70 3-72 109-202 (434)
171 3rkv_A Putative peptidylprolyl 88.3 0.67 2.3E-05 28.5 4.1 59 5-69 14-87 (162)
172 2v5f_A Prolyl 4-hydroxylase su 88.0 1.8 6E-05 25.4 5.8 26 46-71 47-72 (104)
173 1p5q_A FKBP52, FK506-binding p 87.6 2.7 9.1E-05 29.6 7.4 25 46-70 197-221 (336)
174 3rjv_A Putative SEL1 repeat pr 87.5 4.3 0.00015 26.3 8.0 68 4-71 68-155 (212)
175 2ooe_A Cleavage stimulation fa 87.3 2.6 8.9E-05 31.0 7.4 69 3-71 370-451 (530)
176 1hz4_A MALT regulatory protein 87.1 1.7 5.9E-05 29.9 6.0 67 3-69 67-159 (373)
177 2xm6_A Protein corresponding t 87.0 4.4 0.00015 29.4 8.5 25 46-70 184-212 (490)
178 2hr2_A Hypothetical protein; a 86.2 1.8 6.2E-05 28.7 5.5 56 10-71 19-83 (159)
179 3qou_A Protein YBBN; thioredox 86.1 3.5 0.00012 28.1 7.1 49 23-71 125-177 (287)
180 2kat_A Uncharacterized protein 85.9 1.7 5.9E-05 24.9 4.8 38 33-70 7-44 (115)
181 2pm7_A Protein WEB1, protein t 85.2 2.7 9.3E-05 31.7 6.7 39 45-83 248-286 (399)
182 4f3v_A ESX-1 secretion system 85.1 2.4 8E-05 30.5 6.0 70 2-71 148-234 (282)
183 3mv2_B Coatomer subunit epsilo 84.3 3 0.0001 30.4 6.4 69 2-70 113-203 (310)
184 1zu2_A Mitochondrial import re 84.1 1.6 5.6E-05 28.9 4.5 30 42-71 77-117 (158)
185 4ady_A RPN2, 26S proteasome re 83.4 9.9 0.00034 32.0 9.7 78 6-83 149-255 (963)
186 2xm6_A Protein corresponding t 83.0 7.1 0.00024 28.3 8.0 24 47-70 149-176 (490)
187 2h6f_A Protein farnesyltransfe 82.6 2.3 7.8E-05 31.1 5.2 50 21-70 137-191 (382)
188 4g26_A Pentatricopeptide repea 81.8 15 0.0005 27.8 10.1 81 4-84 85-201 (501)
189 3rjv_A Putative SEL1 repeat pr 80.9 2.6 9.1E-05 27.3 4.6 68 3-71 32-115 (212)
190 3n71_A Histone lysine methyltr 80.6 1.4 4.9E-05 33.6 3.6 70 2-71 364-461 (490)
191 2vvy_A Protein B15, B14; IKK, 80.2 1.7 5.9E-05 29.7 3.5 60 6-72 79-139 (169)
192 3gw4_A Uncharacterized protein 78.9 4.4 0.00015 24.8 5.0 72 2-73 5-94 (203)
193 1hz4_A MALT regulatory protein 78.0 14 0.00047 25.2 8.8 70 2-71 187-279 (373)
194 2ooe_A Cleavage stimulation fa 77.5 9.4 0.00032 27.9 7.1 36 36-71 37-72 (530)
195 3mzk_B Protein transport prote 77.2 10 0.00035 29.0 7.4 61 13-73 226-306 (441)
196 3bee_A Putative YFRE protein; 77.2 5.7 0.0002 23.2 4.9 30 42-71 40-69 (93)
197 1wy6_A Hypothetical protein ST 76.9 9.5 0.00033 25.9 6.3 51 20-70 96-150 (172)
198 1kt0_A FKBP51, 51 kDa FK506-bi 76.4 6.9 0.00024 28.7 6.1 25 46-70 318-342 (457)
199 4g26_A Pentatricopeptide repea 76.2 12 0.0004 28.3 7.5 71 2-72 118-202 (501)
200 2pm7_A Protein WEB1, protein t 76.0 3.8 0.00013 30.9 4.6 69 3-71 262-362 (399)
201 1ihg_A Cyclophilin 40; ppiase 75.5 4.2 0.00014 29.3 4.7 64 5-69 226-297 (370)
202 1wao_1 Serine/threonine protei 75.4 4.5 0.00015 30.1 4.9 50 12-70 16-65 (477)
203 2if4_A ATFKBP42; FKBP-like, al 75.3 3.8 0.00013 28.8 4.3 69 2-70 243-324 (338)
204 2h6f_A Protein farnesyltransfe 73.6 12 0.0004 27.2 6.7 53 9-70 104-157 (382)
205 3k9i_A BH0479 protein; putativ 72.6 0.61 2.1E-05 27.3 -0.4 27 44-70 26-52 (117)
206 3qww_A SET and MYND domain-con 71.9 10 0.00035 28.4 6.2 55 2-56 353-431 (433)
207 3ma5_A Tetratricopeptide repea 71.5 4.1 0.00014 23.1 3.2 53 21-82 13-65 (100)
208 3lvg_A Clathrin heavy chain 1; 67.9 0.8 2.7E-05 36.8 -0.7 65 19-83 414-492 (624)
209 2qx5_A Nucleoporin NIC96; mRNA 66.3 7.8 0.00027 31.1 4.7 36 6-41 447-482 (661)
210 2vxg_A LD41624, GE-1, CG6181-P 59.4 8.2 0.00028 25.1 3.1 36 52-87 7-42 (139)
211 2wm9_A Dedicator of cytokinesi 57.6 13 0.00044 28.0 4.3 35 47-81 90-131 (428)
212 2yin_A DOCK2, dedicator of cyt 56.9 16 0.00056 27.6 4.8 37 4-40 94-138 (436)
213 2d2s_A Exocyst complex compone 56.2 29 0.001 24.0 5.7 26 46-71 92-117 (235)
214 3qwp_A SET and MYND domain-con 55.9 54 0.0019 24.2 7.5 51 20-70 292-354 (429)
215 2ekk_A UBA domain from E3 ubiq 55.2 16 0.00054 19.0 3.3 30 54-83 15-45 (47)
216 1klx_A Cysteine rich protein B 54.4 33 0.0011 20.6 6.4 13 3-15 9-21 (138)
217 1wy6_A Hypothetical protein ST 54.3 20 0.00067 24.3 4.3 70 13-82 72-149 (172)
218 4e6h_A MRNA 3'-END-processing 53.5 26 0.00089 27.8 5.6 60 4-71 345-404 (679)
219 3e4b_A ALGK; tetratricopeptide 49.0 72 0.0025 23.0 7.1 42 30-71 160-205 (452)
220 3lvg_A Clathrin heavy chain 1; 47.1 0.42 1.4E-05 38.4 -5.6 74 3-78 97-177 (624)
221 3mhs_B Protein SUS1; multi-pro 44.5 28 0.00095 21.2 3.6 35 7-41 11-49 (96)
222 2ff4_A Probable regulatory pro 43.1 68 0.0023 23.2 6.1 54 18-71 174-231 (388)
223 1v92_A NSFL1 cofactor P47; 3-h 43.1 29 0.00099 17.5 3.1 26 4-29 19-45 (46)
224 4ae4_A Ubiquitin-associated pr 42.5 56 0.0019 20.4 4.9 72 11-82 29-112 (118)
225 3iko_C Nucleoporin NUP84; NPC, 41.5 20 0.00068 27.4 3.1 28 54-81 186-213 (460)
226 3lpz_A GET4 (YOR164C homolog); 41.3 43 0.0015 24.7 4.8 38 45-82 35-79 (336)
227 1z0j_B FYVE-finger-containing 40.2 35 0.0012 19.3 3.3 34 10-43 13-46 (59)
228 1fc3_A SPO0A; response regulat 39.4 14 0.00049 23.5 1.7 41 17-57 68-115 (120)
229 4dhx_B Enhancer of yellow 2 tr 39.3 52 0.0018 20.2 4.3 36 6-41 14-53 (101)
230 3ffl_A Anaphase-promoting comp 38.2 71 0.0024 21.3 5.1 24 20-43 127-150 (167)
231 1zu2_A Mitochondrial import re 37.5 19 0.00065 23.6 2.2 22 41-62 32-53 (158)
232 1yzm_A FYVE-finger-containing 36.6 51 0.0017 18.0 3.5 34 10-43 6-39 (51)
233 2xb0_X Chromo domain-containin 36.5 37 0.0013 24.3 3.7 51 17-69 10-64 (270)
234 2dam_A ETEA protein; KIAA0887, 36.1 53 0.0018 18.4 3.7 27 4-30 33-60 (67)
235 1om2_A Protein (mitochondrial 36.0 62 0.0021 19.7 4.2 35 50-84 25-63 (95)
236 1wol_A ST0689, 122AA long cons 35.7 18 0.00061 22.0 1.7 27 7-33 3-29 (122)
237 2npm_A 14-3-3 domain containin 35.6 1.1E+02 0.0037 21.8 6.0 45 31-83 179-223 (260)
238 3f3f_C Nucleoporin NUP85; stru 34.9 14 0.00048 29.4 1.3 73 3-75 480-566 (570)
239 2dal_A Protein KIAA0794; FAS a 34.1 52 0.0018 18.1 3.4 25 5-29 30-55 (62)
240 3u64_A Protein TP_0956; tetrat 33.9 37 0.0013 24.8 3.4 52 4-55 102-162 (301)
241 2v5f_A Prolyl 4-hydroxylase su 33.8 67 0.0023 18.2 7.1 39 2-40 18-71 (104)
242 2dzl_A Protein FAM100B; UBA-li 33.3 45 0.0015 18.7 3.1 27 4-30 31-58 (66)
243 3ax2_A Mitochondrial import re 33.2 72 0.0025 18.4 4.6 35 50-84 22-60 (73)
244 1z0k_B FYVE-finger-containing 31.9 56 0.0019 18.9 3.3 34 10-43 24-57 (69)
245 1o9d_A 14-3-3-like protein C; 31.4 1.4E+02 0.0048 21.2 6.2 44 31-82 158-202 (260)
246 3mv2_B Coatomer subunit epsilo 31.4 83 0.0028 22.6 4.9 48 22-69 107-160 (310)
247 2crb_A Nuclear receptor bindin 31.4 37 0.0013 21.0 2.6 23 49-71 19-41 (97)
248 4gq2_M Nucleoporin NUP120; bet 31.3 1.6E+02 0.0054 24.2 7.0 53 20-72 815-867 (950)
249 2w2u_A Hypothetical P60 katani 30.9 25 0.00084 20.7 1.7 47 7-56 25-74 (83)
250 3iqu_A 14-3-3 protein sigma; s 30.5 1.4E+02 0.0048 20.9 6.1 44 31-82 156-200 (236)
251 2v6y_A AAA family ATPase, P60 30.5 25 0.00087 20.5 1.7 47 7-56 17-66 (83)
252 2br9_A 14-3-3E, 14-3-3 protein 30.5 1.4E+02 0.0047 20.8 6.2 44 31-82 153-197 (234)
253 4a5x_A MITD1, MIT domain-conta 30.1 26 0.00088 20.7 1.7 29 13-43 27-55 (86)
254 4fhn_B Nucleoporin NUP120; pro 29.6 98 0.0034 25.7 5.6 52 20-71 817-868 (1139)
255 2v6x_A Vacuolar protein sortin 29.5 27 0.00092 20.2 1.7 43 12-56 23-68 (85)
256 1ify_A HHR23A, UV excision rep 29.2 65 0.0022 16.8 3.1 36 51-86 11-48 (49)
257 1k8k_G P16, ARP2/3 complex 16 29.2 54 0.0019 21.7 3.3 28 59-86 36-63 (151)
258 2wm9_A Dedicator of cytokinesi 29.2 51 0.0017 24.7 3.6 38 4-41 90-134 (428)
259 4gns_B Protein CSD3, chitin bi 29.1 1.5E+02 0.0053 24.0 6.6 35 46-80 338-393 (754)
260 3i4r_B Nuclear pore complex pr 27.3 25 0.00086 28.2 1.6 68 13-84 339-409 (644)
261 1wfd_A Hypothetical protein 15 27.2 31 0.0011 20.5 1.7 50 6-58 20-72 (93)
262 3txn_A 26S proteasome regulato 27.1 99 0.0034 23.0 4.8 61 18-78 102-172 (394)
263 4b4t_R RPN7, 26S proteasome re 27.0 60 0.002 23.9 3.6 49 22-70 175-233 (429)
264 2dkz_A Hypothetical protein LO 27.0 62 0.0021 19.5 3.0 27 45-71 16-43 (84)
265 2dla_A 397AA long hypothetical 26.6 26 0.00088 24.6 1.4 39 5-52 166-207 (222)
266 3uzd_A 14-3-3 protein gamma; s 26.5 1.7E+02 0.0059 20.6 6.2 44 31-82 154-198 (248)
267 2knz_A Ubiquilin-4; cytoplasm, 26.2 80 0.0027 16.7 4.4 39 49-87 12-53 (53)
268 3txn_A 26S proteasome regulato 25.4 90 0.0031 23.2 4.3 42 18-59 22-72 (394)
269 2dag_A Ubiquitin carboxyl-term 24.3 86 0.0029 17.9 3.3 24 62-85 24-49 (74)
270 3spa_A Mtrpol, DNA-directed RN 24.1 1.9E+02 0.0064 25.1 6.3 20 19-38 131-150 (1134)
271 1gp8_A Protein (scaffolding pr 24.0 78 0.0027 16.4 2.7 25 17-41 12-36 (40)
272 3bqo_A Telomeric repeat-bindin 23.9 63 0.0022 22.6 3.0 24 60-83 119-142 (211)
273 3ubw_A 14-3-3E, 14-3-3 protein 23.6 2E+02 0.0069 20.5 6.2 44 31-82 179-223 (261)
274 3a7m_A Flagellar protein FLIT; 23.0 1.1E+02 0.0039 19.0 3.9 30 8-37 7-36 (122)
275 3dra_A Protein farnesyltransfe 22.9 1.3E+02 0.0045 21.1 4.6 26 46-71 259-284 (306)
276 3lpz_A GET4 (YOR164C homolog); 22.7 2.3E+02 0.0079 20.8 6.8 50 30-79 96-157 (336)
277 3o5t_A Dinitrogenase reductase 22.7 74 0.0025 22.2 3.2 24 61-84 217-240 (297)
278 2wpv_A GET4, UPF0363 protein Y 22.5 1.4E+02 0.0049 21.5 4.8 37 46-82 34-77 (312)
279 3qil_A Clathrin heavy chain 1; 22.4 1.1 3.7E-05 29.3 -5.9 53 2-68 19-71 (125)
280 1whc_A RSGI RUH-027, UBA/UBX 3 22.2 1.1E+02 0.0037 16.8 4.4 33 53-85 14-49 (64)
281 1z2z_A Probable tRNA pseudouri 22.0 2.5E+02 0.0086 21.0 7.0 40 2-44 191-236 (446)
282 3efd_K KCSA; helix bundle, C-t 21.9 78 0.0027 15.3 2.3 13 27-39 16-28 (30)
283 4dbg_B Ring finger protein 31; 21.9 74 0.0025 21.4 2.9 26 60-85 76-102 (162)
284 3o10_A Sacsin; all-helical dom 21.5 52 0.0018 20.8 2.1 32 2-33 3-34 (141)
285 2bn5_A PSI; nuclear protein, s 21.5 43 0.0015 16.8 1.3 15 50-64 7-21 (33)
286 2wpv_A GET4, UPF0363 protein Y 21.4 2.3E+02 0.008 20.3 8.6 35 48-82 137-173 (312)
287 3h3m_A Flagellar protein FLIT; 21.2 1.3E+02 0.0045 18.9 3.9 29 9-37 21-49 (126)
288 2cpw_A CBL-interacting protein 21.1 1.1E+02 0.0038 16.8 3.2 23 62-84 34-58 (64)
289 2uy1_A Cleavage stimulation fa 21.1 2.6E+02 0.0087 20.7 8.6 42 37-78 346-387 (493)
290 2npu_A FKBP12-rapamycin comple 21.1 1.7E+02 0.0057 18.6 8.0 68 6-82 44-117 (126)
291 4ady_A RPN2, 26S proteasome re 20.8 2E+02 0.0068 24.3 5.8 54 5-58 218-275 (963)
292 3v1a_A Computational design, M 20.7 1.1E+02 0.0038 16.4 3.2 34 10-43 5-38 (48)
293 2cpt_A SKD1 protein, vacuolar 20.7 47 0.0016 20.7 1.7 27 12-40 28-54 (117)
294 3spa_A Mtrpol, DNA-directed RN 20.6 2.9E+02 0.01 23.9 6.8 41 2-42 140-192 (1134)
295 3dwl_G Actin-related protein 2 20.2 63 0.0022 21.4 2.3 25 62-86 40-64 (152)
296 3pbp_C Nucleoporin NUP159; bet 20.1 63 0.0022 16.5 1.8 12 49-60 23-34 (36)
No 1
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.22 E-value=8.3e-11 Score=90.42 Aligned_cols=82 Identities=10% Similarity=0.010 Sum_probs=76.4
Q ss_pred hhHHHHHHHHHHhccHHHHHHHHHHhCCHHHHHHHHhhCCCCCchHHHHHHHHHhCCChHHHHHHHHhcCCHHHHHHHHh
Q psy11102 3 TLVSQAREYYEKCHCYEKLISVYTELGDFEALESCARKLPDSSPLLKPMGEIFVKYGLCEQAVYVFDKNKHKSSQWLTVV 82 (87)
Q Consensus 3 ~~w~~A~~yY~~~~n~~k~ie~~~~~ed~d~L~~l~~~L~~~~~lL~~ia~~F~~~G~~~~Av~aylk~gd~k~ai~~cv 82 (87)
..|+++++++.+.||++.|++||.+.+||++|..|...+ .+.+.+.+++..+...|+++.|+.+|+++||+++|+++|+
T Consensus 682 ~~W~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~~-~~~~~~~~~~~~a~~~~~~~~A~~~~~~~g~~~~a~~~~~ 760 (814)
T 3mkq_A 682 MKWRALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSSF-NNKEGLVTLAKDAETTGKFNLAFNAYWIAGDIQGAKDLLI 760 (814)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHcCCHHHHHHHHHHccChhhhHHHHHHc-CCHHHHHHHHHHHHHcCchHHHHHHHHHcCCHHHHHHHHH
Confidence 579999999999999999999999999999999998883 3557789999999999999999999999999999999999
Q ss_pred hcC
Q psy11102 83 QDK 85 (87)
Q Consensus 83 ~~~ 85 (87)
+++
T Consensus 761 ~~~ 763 (814)
T 3mkq_A 761 KSQ 763 (814)
T ss_dssp HTT
T ss_pred HcC
Confidence 875
No 2
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=98.48 E-value=1.5e-07 Score=72.88 Aligned_cols=54 Identities=22% Similarity=0.346 Sum_probs=45.9
Q ss_pred chhHHHHHHHHHHhccHHHHHHHHHHhCCHHHHHHHHhhCCCCCchHHHHHHHHHhCCChHHHHHHHHhcCCH---HHHH
Q psy11102 2 TTLVSQAREYYEKCHCYEKLISVYTELGDFEALESCARKLPDSSPLLKPMGEIFVKYGLCEQAVYVFDKNKHK---SSQW 78 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n~~k~ie~~~~~ed~d~L~~l~~~L~~~~~lL~~ia~~F~~~G~~~~Av~aylk~gd~---k~ai 78 (87)
.|.|++|..+|.++.|+.++++|++++|+|++ ||++|.|++++ +.++
T Consensus 135 ~g~yeeA~~~Y~~a~n~~~LA~~L~~Lg~yq~------------------------------AVea~~KA~~~~~Wk~v~ 184 (449)
T 1b89_A 135 EKMYDAAKLLYNNVSNFGRLASTLVHLGEYQA------------------------------AVDGARKANSTRTWKEVC 184 (449)
T ss_dssp --CTTTHHHHHHHTTCHHHHHHHHHTTTCHHH------------------------------HHHHHHHHTCHHHHHHHH
T ss_pred cCCHHHHHHHHHHhhhHHHHHHHHHHhccHHH------------------------------HHHHHHHcCCchhHHHHH
Confidence 47899999999999999999999999999998 77777777777 7777
Q ss_pred HHHhhcC
Q psy11102 79 LTVVQDK 85 (87)
Q Consensus 79 ~~cv~~~ 85 (87)
.+||+++
T Consensus 185 ~aCv~~~ 191 (449)
T 1b89_A 185 FACVDGK 191 (449)
T ss_dssp HHHHHTT
T ss_pred HHHHHcC
Confidence 7777664
No 3
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.47 E-value=6.8e-07 Score=68.67 Aligned_cols=85 Identities=14% Similarity=0.033 Sum_probs=73.5
Q ss_pred chhHHHHHHHHHHhccHHHHHHHHHHhCCHHHHHHHHhhCCCCCchHHHHHHHHHhCCChHHHHHHHHhcCCHHHHHHHH
Q psy11102 2 TTLVSQAREYYEKCHCYEKLISVYTELGDFEALESCARKLPDSSPLLKPMGEIFVKYGLCEQAVYVFDKNKHKSSQWLTV 81 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n~~k~ie~~~~~ed~d~L~~l~~~L~~~~~lL~~ia~~F~~~G~~~~Av~aylk~gd~k~ai~~c 81 (87)
.++++.|.+.|.++||+.++..+|...++.+.|.++++...... ........|...|..++|++.|.++|+...|+.++
T Consensus 694 ~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~~~~~~~~~~a~~~~-~~~~A~~~~~~~g~~~~a~~~~~~~~~~~~A~~lA 772 (814)
T 3mkq_A 694 RFNFKLAIEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDAETTG-KFNLAFNAYWIAGDIQGAKDLLIKSQRFSEAAFLG 772 (814)
T ss_dssp TTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHHHHTT-CHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHH
T ss_pred cCCHHHHHHHHHHccChhhhHHHHHHcCCHHHHHHHHHHHHHcC-chHHHHHHHHHcCCHHHHHHHHHHcCChHHHHHHH
Confidence 47899999999999999999999999999999999987765532 22334445788999999999999999999999999
Q ss_pred hhcCCC
Q psy11102 82 VQDKPS 87 (87)
Q Consensus 82 v~~~~~ 87 (87)
.+++|+
T Consensus 773 ~~~~~~ 778 (814)
T 3mkq_A 773 STYGLG 778 (814)
T ss_dssp HHTTCC
T ss_pred HHhCCC
Confidence 998874
No 4
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.71 E-value=0.00018 Score=62.80 Aligned_cols=75 Identities=15% Similarity=0.254 Sum_probs=67.2
Q ss_pred chhHHHHHHHHHHhccHHHHHHHHH-HhCCHHHHHHHHhhCCCCCchHHHHHHHHHhCCChHHHHHHHHhcCCHHHH
Q psy11102 2 TTLVSQAREYYEKCHCYEKLISVYT-ELGDFEALESCARKLPDSSPLLKPMGEIFVKYGLCEQAVYVFDKNKHKSSQ 77 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n~~k~ie~~~-~~ed~d~L~~l~~~L~~~~~lL~~ia~~F~~~G~~~~Av~aylk~gd~k~a 77 (87)
.+.+++|.++|.+++++.++++.++ ..++|++-.+++..+. .++....+|..+...|.+++|+++|+|++|+..-
T Consensus 1062 lglyEEAf~IYkKa~~~~~A~~VLie~i~nldrAiE~Aervn-~p~vWsqLAKAql~~G~~kEAIdsYiKAdD~say 1137 (1630)
T 1xi4_A 1062 NELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERCN-EPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSY 1137 (1630)
T ss_pred CCCHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHHHhcC-CHHHHHHHHHHHHhCCCHHHHHHHHHhcCChHHH
Confidence 4679999999999999999999999 8999999888888763 3677889999999999999999999999988773
No 5
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=97.51 E-value=0.00064 Score=46.84 Aligned_cols=79 Identities=10% Similarity=-0.115 Sum_probs=46.5
Q ss_pred hhHHHHHHHHHHhccHHHHHHHHHHhCCHHHHHHHHhhCCCCCchHHHHHHHHHhCCChHHHHHHHHhcCCHHHHHHHHh
Q psy11102 3 TLVSQAREYYEKCHCYEKLISVYTELGDFEALESCARKLPDSSPLLKPMGEIFVKYGLCEQAVYVFDKNKHKSSQWLTVV 82 (87)
Q Consensus 3 ~~w~~A~~yY~~~~n~~k~ie~~~~~ed~d~L~~l~~~L~~~~~lL~~ia~~F~~~G~~~~Av~aylk~gd~k~ai~~cv 82 (87)
..|.+=.+.-.+.||++-+.+||.+.+||++|.=|-....+ .+-|.+++..=...|...-|-.+|+-.||++.++++.+
T Consensus 35 ~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~~~L~~Ly~~tg~-~e~L~kla~iA~~~g~~n~af~~~l~lGdv~~~i~lL~ 113 (177)
T 3mkq_B 35 ITWERLIQEALAQGNASLAEMIYQTQHSFDKLSFLYLVTGD-VNKLSKMQNIAQTREDFGSMLLNTFYNNSTKERSSIFA 113 (177)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHTTCHHHHHHHHHHHTC-HHHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHhCCHHHHHHHHHHhCC-HHHHHHHHHHHHHCccHHHHHHHHHHcCCHHHHHHHHH
Confidence 35777777778888888888888888888888655444332 23344444444444444444444444444444444433
No 6
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=97.47 E-value=0.0011 Score=45.61 Aligned_cols=84 Identities=13% Similarity=0.095 Sum_probs=68.5
Q ss_pred chhHHHHHHHHHHhccHHHHHHHHHHhCCHHHHHHHHhhCCC-CCchHHHHHHHHHhCCChHHHHHHHHhcCCHHHHHHH
Q psy11102 2 TTLVSQAREYYEKCHCYEKLISVYTELGDFEALESCARKLPD-SSPLLKPMGEIFVKYGLCEQAVYVFDKNKHKSSQWLT 80 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n~~k~ie~~~~~ed~d~L~~l~~~L~~-~~~lL~~ia~~F~~~G~~~~Av~aylk~gd~k~ai~~ 80 (87)
.++.+-|.+-|.++||+.++.=.|.-.||-++|.++.+.-.. ++--+... -+.-.|..+++++.|++.|+...|+-+
T Consensus 47 ~gn~~lAe~cy~~~~D~~~L~~Ly~~tg~~e~L~kla~iA~~~g~~n~af~--~~l~lGdv~~~i~lL~~~~r~~eA~~~ 124 (177)
T 3mkq_B 47 QGNASLAEMIYQTQHSFDKLSFLYLVTGDVNKLSKMQNIAQTREDFGSMLL--NTFYNNSTKERSSIFAEGGSLPLAYAV 124 (177)
T ss_dssp TTCHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHHHHTTCHHHHHH--HHHHHTCHHHHHHHHHHTTCHHHHHHH
T ss_pred cCChHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHHHHHHHCccHHHHHH--HHHHcCCHHHHHHHHHHCCChHHHHHH
Confidence 467889999999999999999999999999999999877544 33223222 245579999999999999999999988
Q ss_pred HhhcCCC
Q psy11102 81 VVQDKPS 87 (87)
Q Consensus 81 cv~~~~~ 87 (87)
.....||
T Consensus 125 A~t~g~~ 131 (177)
T 3mkq_B 125 AKANGDE 131 (177)
T ss_dssp HHHTTCH
T ss_pred HHHcCcH
Confidence 8777664
No 7
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.44 E-value=0.00047 Score=60.21 Aligned_cols=80 Identities=11% Similarity=0.112 Sum_probs=51.6
Q ss_pred hhHHHHHHHHHHhccHH-------HHHHHHHHhCCHHHHHHHHhhCCCCCchHHHHHHHHHhCCChHHHHHHHHhcCCHH
Q psy11102 3 TLVSQAREYYEKCHCYE-------KLISVYTELGDFEALESCARKLPDSSPLLKPMGEIFVKYGLCEQAVYVFDKNKHKS 75 (87)
Q Consensus 3 ~~w~~A~~yY~~~~n~~-------k~ie~~~~~ed~d~L~~l~~~L~~~~~lL~~ia~~F~~~G~~~~Av~aylk~gd~k 75 (87)
++|++|++||..++... .++.||.+++.++.++..+... +.+-+..+|+.|.+.|+++.|...|.++++.-
T Consensus 1148 GkyEEAIeyL~mArk~~~e~~Idt~LafaYAKl~rleele~fI~~~--n~ad~~~iGd~le~eg~YeeA~~~Y~kA~ny~ 1225 (1630)
T 1xi4_A 1148 GNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGP--NNAHIQQVGDRCYDEKMYDAAKLLYNNVSNFG 1225 (1630)
T ss_pred CCHHHHHHHHHHHHhhcccccccHHHHHHHHhhcCHHHHHHHHhCC--CHHHHHHHHHHHHhcCCHHHHHHHHHhhhHHH
Confidence 44555555555544333 1456666667777666665322 34566689999999999999988887776666
Q ss_pred HHHHHHhhc
Q psy11102 76 SQWLTVVQD 84 (87)
Q Consensus 76 ~ai~~cv~~ 84 (87)
++..+.+++
T Consensus 1226 rLA~tLvkL 1234 (1630)
T 1xi4_A 1226 RLASTLVHL 1234 (1630)
T ss_pred HHHHHHHHh
Confidence 666555544
No 8
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=97.36 E-value=0.0012 Score=39.53 Aligned_cols=70 Identities=13% Similarity=0.051 Sum_probs=54.1
Q ss_pred chhHHHHHHHHHHhcc--------HHHHHHHHHHhCCHHHHHHHHhh----CCCCCchHHHHHHHHHhCCChHHHHHHHH
Q psy11102 2 TTLVSQAREYYEKCHC--------YEKLISVYTELGDFEALESCARK----LPDSSPLLKPMGEIFVKYGLCEQAVYVFD 69 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n--------~~k~ie~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~~F~~~G~~~~Av~ayl 69 (87)
.++|++|+++|.++=. +..+..||+..|+|++-....+. -|.+...+..+|..+...|..++|++.|.
T Consensus 17 ~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~ 96 (126)
T 3upv_A 17 KSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKEYASALETLD 96 (126)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 4788899999887632 45678888999999876655444 35556778899999999999999999887
Q ss_pred hc
Q psy11102 70 KN 71 (87)
Q Consensus 70 k~ 71 (87)
++
T Consensus 97 ~a 98 (126)
T 3upv_A 97 AA 98 (126)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 9
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=97.35 E-value=0.0011 Score=41.62 Aligned_cols=70 Identities=11% Similarity=0.090 Sum_probs=56.6
Q ss_pred chhHHHHHHHHHHhccH--------------------------HHHHHHHHHhCCHHHHHHHHhhC----CCCCchHHHH
Q psy11102 2 TTLVSQAREYYEKCHCY--------------------------EKLISVYTELGDFEALESCARKL----PDSSPLLKPM 51 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n~--------------------------~k~ie~~~~~ed~d~L~~l~~~L----~~~~~lL~~i 51 (87)
.++|++|+.+|.++=.. -.+..||..+|+|+.-...++.. |.+...+-.+
T Consensus 24 ~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~~ 103 (162)
T 3rkv_A 24 QKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVLKREETNEKALFRR 103 (162)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHhcCCcchHHHHHH
Confidence 47899999999987654 34678999999998766555442 5556889999
Q ss_pred HHHHHhCCChHHHHHHHHhc
Q psy11102 52 GEIFVKYGLCEQAVYVFDKN 71 (87)
Q Consensus 52 a~~F~~~G~~~~Av~aylk~ 71 (87)
|..+...|..++|+..|.++
T Consensus 104 g~~~~~~g~~~~A~~~~~~a 123 (162)
T 3rkv_A 104 AKARIAAWKLDEAEEDLKLL 123 (162)
T ss_dssp HHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHhcHHHHHHHHHHH
Confidence 99999999999999998764
No 10
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.26 E-value=0.00011 Score=57.01 Aligned_cols=81 Identities=12% Similarity=0.157 Sum_probs=27.7
Q ss_pred chhHHHHHHHHHHhccH-------HHHHHHHHHhCCHHHHHHHHhhCCCCCchHHHHHHHHHhCCChHHHHHHHHhcCCH
Q psy11102 2 TTLVSQAREYYEKCHCY-------EKLISVYTELGDFEALESCARKLPDSSPLLKPMGEIFVKYGLCEQAVYVFDKNKHK 74 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n~-------~k~ie~~~~~ed~d~L~~l~~~L~~~~~lL~~ia~~F~~~G~~~~Av~aylk~gd~ 74 (87)
.++|++|+.||..+... ..++.||.++|+++.++++.+. | +..-...+|+.|...|+.+.|+..|.++...
T Consensus 74 ~g~~EeAi~yl~~ark~~~~~~i~~~Li~~Y~Klg~l~e~e~f~~~-p-n~~a~~~IGd~~~~~g~yeeA~~~Y~~a~n~ 151 (449)
T 1b89_A 74 SGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFING-P-NNAHIQQVGDRCYDEKMYDAAKLLYNNVSNF 151 (449)
T ss_dssp -----------------------------------CHHHHTTTTTC-C-----------------CTTTHHHHHHHTTCH
T ss_pred CCCHHHHHHHHHHHHHhCccchhHHHHHHHHHHhCCHHHHHHHHcC-C-cHHHHHHHHHHHHHcCCHHHHHHHHHHhhhH
Confidence 47899999999988753 2345599999999999988875 2 3357899999999999999999888766665
Q ss_pred HHHHHHHhhc
Q psy11102 75 SSQWLTVVQD 84 (87)
Q Consensus 75 k~ai~~cv~~ 84 (87)
....++.+++
T Consensus 152 ~~LA~~L~~L 161 (449)
T 1b89_A 152 GRLASTLVHL 161 (449)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHHh
Confidence 5555555544
No 11
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=97.22 E-value=0.0021 Score=39.78 Aligned_cols=70 Identities=13% Similarity=0.067 Sum_probs=49.5
Q ss_pred chhHHHHHHHHHHhcc--------HHHHHHHHHHhCCHHHHHHHHhh---C-CCCCchHHHHHHHHHhCCChHHHHHHHH
Q psy11102 2 TTLVSQAREYYEKCHC--------YEKLISVYTELGDFEALESCARK---L-PDSSPLLKPMGEIFVKYGLCEQAVYVFD 69 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n--------~~k~ie~~~~~ed~d~L~~l~~~---L-~~~~~lL~~ia~~F~~~G~~~~Av~ayl 69 (87)
.++|++|+++|.++=. +.....||+.+|+|++=....+. + |++...+..+|..+...|..++|++.|.
T Consensus 26 ~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~ 105 (126)
T 4gco_A 26 KGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRKAACLVAMREWSKAQRAYE 105 (126)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 4678888888877532 23567788888888765554443 2 4445778888888888888888888886
Q ss_pred hc
Q psy11102 70 KN 71 (87)
Q Consensus 70 k~ 71 (87)
++
T Consensus 106 ~a 107 (126)
T 4gco_A 106 DA 107 (126)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 12
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=97.20 E-value=0.0028 Score=36.18 Aligned_cols=70 Identities=16% Similarity=0.192 Sum_probs=54.0
Q ss_pred chhHHHHHHHHHHhcc--------HHHHHHHHHHhCCHHHHHHHHhh----CCCCCchHHHHHHHHHhCCChHHHHHHHH
Q psy11102 2 TTLVSQAREYYEKCHC--------YEKLISVYTELGDFEALESCARK----LPDSSPLLKPMGEIFVKYGLCEQAVYVFD 69 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n--------~~k~ie~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~~F~~~G~~~~Av~ayl 69 (87)
.++|++|.++|.++-. +-.+..++...++|+.-....+. -|.+...+..+|..+...|..++|++.|.
T Consensus 17 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~ 96 (118)
T 1elw_A 17 VGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDWGKGYSRKAAALEFLNRFEEAKRTYE 96 (118)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 4788899999888633 24567888999999876555443 35556778899999999999999999887
Q ss_pred hc
Q psy11102 70 KN 71 (87)
Q Consensus 70 k~ 71 (87)
++
T Consensus 97 ~~ 98 (118)
T 1elw_A 97 EG 98 (118)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 13
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=97.18 E-value=0.0038 Score=36.96 Aligned_cols=70 Identities=14% Similarity=0.088 Sum_probs=52.5
Q ss_pred chhHHHHHHHHHHhc-----------cHHHHHHHHHHhCCHHHHHHH----HhhCCCC---CchHHHHHHHHHhCCChHH
Q psy11102 2 TTLVSQAREYYEKCH-----------CYEKLISVYTELGDFEALESC----ARKLPDS---SPLLKPMGEIFVKYGLCEQ 63 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~-----------n~~k~ie~~~~~ed~d~L~~l----~~~L~~~---~~lL~~ia~~F~~~G~~~~ 63 (87)
.++|++|.++|.+.- -+-.+..+++..|+|++-... ++.-|++ ...+-.+|..+...|..++
T Consensus 15 ~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la~~~~~~g~~~~ 94 (129)
T 2xev_A 15 NGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLGLSQYGEGKNTE 94 (129)
T ss_dssp TTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHH
T ss_pred hCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHcCCHHH
Confidence 478899999988742 223577889999999885444 4444665 4557889999999999999
Q ss_pred HHHHHHhc
Q psy11102 64 AVYVFDKN 71 (87)
Q Consensus 64 Av~aylk~ 71 (87)
|+..|.+.
T Consensus 95 A~~~~~~~ 102 (129)
T 2xev_A 95 AQQTLQQV 102 (129)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99888654
No 14
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=97.08 E-value=0.0032 Score=39.52 Aligned_cols=70 Identities=17% Similarity=0.162 Sum_probs=53.9
Q ss_pred chhHHHHHHHHHHhcc--------HHHHHHHHHHhCCHHHHHHHHhh----CCCCCchHHHHHHHHHhCCChHHHHHHHH
Q psy11102 2 TTLVSQAREYYEKCHC--------YEKLISVYTELGDFEALESCARK----LPDSSPLLKPMGEIFVKYGLCEQAVYVFD 69 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n--------~~k~ie~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~~F~~~G~~~~Av~ayl 69 (87)
.++|++|+++|.++=. +-.+..||+..|+|++-....+. -|.+...+..+|..+...|..++|++.|.
T Consensus 24 ~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~ 103 (164)
T 3sz7_A 24 RKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKYSKAWSRLGLARFDMADYKGAKEAYE 103 (164)
T ss_dssp TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCHHHHHHHHH
Confidence 4688889888887643 34677888899998876655544 25556788899999999999999999887
Q ss_pred hc
Q psy11102 70 KN 71 (87)
Q Consensus 70 k~ 71 (87)
++
T Consensus 104 ~a 105 (164)
T 3sz7_A 104 KG 105 (164)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 15
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=97.07 E-value=0.0038 Score=40.40 Aligned_cols=69 Identities=10% Similarity=0.065 Sum_probs=51.1
Q ss_pred chhHHHHHHHHHHhcc--------HHHHHHHHHHhCCHHHHHHHHhh----CCCCCchHHHHHHHHHhCCChHHHHHHHH
Q psy11102 2 TTLVSQAREYYEKCHC--------YEKLISVYTELGDFEALESCARK----LPDSSPLLKPMGEIFVKYGLCEQAVYVFD 69 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n--------~~k~ie~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~~F~~~G~~~~Av~ayl 69 (87)
.++|++|.++|.++=. +-.+..||...|+|++-.+..+. -|++....-.+|.-+...|..++|+++|.
T Consensus 49 ~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~~~~~~~lg~~~~~lg~~~eA~~~~~ 128 (151)
T 3gyz_A 49 KGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKNDYTPVFHTGQCQLRLKAPLKAKECFE 128 (151)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCCcHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 4678888888877543 34566788888888776555444 35666778888999999999999998886
Q ss_pred h
Q psy11102 70 K 70 (87)
Q Consensus 70 k 70 (87)
+
T Consensus 129 ~ 129 (151)
T 3gyz_A 129 L 129 (151)
T ss_dssp H
T ss_pred H
Confidence 5
No 16
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=97.06 E-value=0.0059 Score=36.46 Aligned_cols=70 Identities=13% Similarity=0.121 Sum_probs=53.8
Q ss_pred chhHHHHHHHHHHhcc--------HHHHHHHHHHhCCHHHHHHHHhh----CCCCCchHHHHHHHHHhCCChHHHHHHHH
Q psy11102 2 TTLVSQAREYYEKCHC--------YEKLISVYTELGDFEALESCARK----LPDSSPLLKPMGEIFVKYGLCEQAVYVFD 69 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n--------~~k~ie~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~~F~~~G~~~~Av~ayl 69 (87)
.++|++|..+|.++=. +-.+..|+...++|+.-....+. -|++...+..+|..+...|..++|+..|.
T Consensus 22 ~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~ 101 (137)
T 3q49_B 22 GRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQ 101 (137)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 4688888888887532 45678888899999865544443 35556788899999999999999999887
Q ss_pred hc
Q psy11102 70 KN 71 (87)
Q Consensus 70 k~ 71 (87)
++
T Consensus 102 ~a 103 (137)
T 3q49_B 102 RA 103 (137)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 17
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=97.02 E-value=0.00078 Score=40.46 Aligned_cols=70 Identities=27% Similarity=0.331 Sum_probs=52.2
Q ss_pred chhHHHHHHHHHHhccH-----------HHHHHHHHHhCCHHHHHHHHhh----CCCCCchHHHHHHHHHhCCChHHHHH
Q psy11102 2 TTLVSQAREYYEKCHCY-----------EKLISVYTELGDFEALESCARK----LPDSSPLLKPMGEIFVKYGLCEQAVY 66 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n~-----------~k~ie~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~~F~~~G~~~~Av~ 66 (87)
.+++++|+.+|.++=.. -.+..+|+..|+|++-.+..+. -|++...+..+|..+...|..++|++
T Consensus 3 ~g~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~ 82 (117)
T 3k9i_A 3 LGLEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAMVLYNLGRYEQGVE 82 (117)
T ss_dssp ----CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHH
T ss_pred CCcHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHcCCHHHHHH
Confidence 46778888888877544 3566788889999876655544 46677889999999999999999999
Q ss_pred HHHhc
Q psy11102 67 VFDKN 71 (87)
Q Consensus 67 aylk~ 71 (87)
.|.++
T Consensus 83 ~~~~a 87 (117)
T 3k9i_A 83 LLLKI 87 (117)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88764
No 18
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=97.00 E-value=0.0019 Score=42.59 Aligned_cols=70 Identities=17% Similarity=0.241 Sum_probs=55.7
Q ss_pred chhHHHHHHHHHHhccHH--------H----------------HHHHHHHhCCHHHHHHHHhh----CCCCCchHHHHHH
Q psy11102 2 TTLVSQAREYYEKCHCYE--------K----------------LISVYTELGDFEALESCARK----LPDSSPLLKPMGE 53 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n~~--------k----------------~ie~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~ 53 (87)
.++|++|+.+|.++-... . +..+|...|+|++-....+. -|++...+..+|.
T Consensus 17 ~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~ 96 (208)
T 3urz_A 17 AGQNGQAVSYFRQTIALNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKELLQKAPNNVDCLEACAE 96 (208)
T ss_dssp TTCHHHHHHHHHHHHHHCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH
Confidence 478999999998874321 2 78889999999876655544 3666788999999
Q ss_pred HHHhCCChHHHHHHHHhc
Q psy11102 54 IFVKYGLCEQAVYVFDKN 71 (87)
Q Consensus 54 ~F~~~G~~~~Av~aylk~ 71 (87)
.+...|..+.|++.|.++
T Consensus 97 ~~~~~g~~~~A~~~~~~a 114 (208)
T 3urz_A 97 MQVCRGQEKDALRMYEKI 114 (208)
T ss_dssp HHHHHTCHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHH
Confidence 999999999999998764
No 19
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=97.00 E-value=0.0061 Score=35.11 Aligned_cols=66 Identities=24% Similarity=0.374 Sum_probs=34.7
Q ss_pred hhHHHHHHHHHHhc-----c---HHHHHHHHHHhCCHHHHHHHHhh----CCCCCchHHHHHHHHHhCCChHHHHHHH
Q psy11102 3 TLVSQAREYYEKCH-----C---YEKLISVYTELGDFEALESCARK----LPDSSPLLKPMGEIFVKYGLCEQAVYVF 68 (87)
Q Consensus 3 ~~w~~A~~yY~~~~-----n---~~k~ie~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~~F~~~G~~~~Av~ay 68 (87)
+++++|..+|.++- + +-.++.++...++++.-....+. -|.....+..+|..+...|..+.|++.|
T Consensus 15 ~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~ 92 (136)
T 2fo7_A 15 GDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYY 92 (136)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHhcCHHHHHHHH
Confidence 45666666665431 1 23445566666666554443333 2333344556666666666666665544
No 20
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=96.98 E-value=0.0057 Score=35.35 Aligned_cols=70 Identities=19% Similarity=0.249 Sum_probs=53.2
Q ss_pred chhHHHHHHHHHHhcc--------HHHHHHHHHHhCCHHHHHHHHhh----CCCCCchHHHHHHHHHhCCChHHHHHHHH
Q psy11102 2 TTLVSQAREYYEKCHC--------YEKLISVYTELGDFEALESCARK----LPDSSPLLKPMGEIFVKYGLCEQAVYVFD 69 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n--------~~k~ie~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~~F~~~G~~~~Av~ayl 69 (87)
.++|++|.++|.++-. +..+..++...++|+.-.+..+. -|.+...+..+|..+...|..+.|+..|.
T Consensus 25 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~ 104 (131)
T 2vyi_A 25 VENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAYSKAYGRMGLALSSLNKHVEAVAYYK 104 (131)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccCHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 4688899999887643 34567888899998876555444 35555778899999999999999999886
Q ss_pred hc
Q psy11102 70 KN 71 (87)
Q Consensus 70 k~ 71 (87)
++
T Consensus 105 ~~ 106 (131)
T 2vyi_A 105 KA 106 (131)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 21
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=96.98 E-value=0.0088 Score=34.24 Aligned_cols=70 Identities=23% Similarity=0.362 Sum_probs=49.6
Q ss_pred chhHHHHHHHHHHhcc--------HHHHHHHHHHhCCHHHHHHHHhh----CCCCCchHHHHHHHHHhCCChHHHHHHHH
Q psy11102 2 TTLVSQAREYYEKCHC--------YEKLISVYTELGDFEALESCARK----LPDSSPLLKPMGEIFVKYGLCEQAVYVFD 69 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n--------~~k~ie~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~~F~~~G~~~~Av~ayl 69 (87)
.++|++|.++|.++-. +..++.++...++++.-....+. -|.+...+..+|..+...|..+.|+..|.
T Consensus 22 ~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~ 101 (125)
T 1na0_A 22 QGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQ 101 (125)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 3678888888877632 24567788888888875554443 34455667788888888888888888876
Q ss_pred hc
Q psy11102 70 KN 71 (87)
Q Consensus 70 k~ 71 (87)
++
T Consensus 102 ~~ 103 (125)
T 1na0_A 102 KA 103 (125)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 22
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=96.95 E-value=0.0045 Score=39.02 Aligned_cols=69 Identities=9% Similarity=0.076 Sum_probs=50.1
Q ss_pred chhHHHHHHHHHHhccHH--------HHHHHHHHhCCHHHHHHHHhh----CCCCCchHHHHHHHHHhCCChHHHHHHHH
Q psy11102 2 TTLVSQAREYYEKCHCYE--------KLISVYTELGDFEALESCARK----LPDSSPLLKPMGEIFVKYGLCEQAVYVFD 69 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n~~--------k~ie~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~~F~~~G~~~~Av~ayl 69 (87)
.+++++|++.|.++-... .+..+|+..|+|++-.+..+. =|++......+|..+...|..++|+..|.
T Consensus 10 ~~~~e~ai~~~~~a~~~~p~~~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~ 89 (150)
T 4ga2_A 10 KADVERYIASVQGSTPSPRQKSIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENTDKAVECYR 89 (150)
T ss_dssp HHHHHHHHHHHHHHSCSHHHHHTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cChHHHHHHHHHHhcccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCchHHHHHHHH
Confidence 367788888887764432 467788888888875554443 25556778888888888888888888775
Q ss_pred h
Q psy11102 70 K 70 (87)
Q Consensus 70 k 70 (87)
+
T Consensus 90 ~ 90 (150)
T 4ga2_A 90 R 90 (150)
T ss_dssp H
T ss_pred H
Confidence 5
No 23
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.95 E-value=0.0042 Score=37.16 Aligned_cols=70 Identities=19% Similarity=0.119 Sum_probs=54.0
Q ss_pred chhHHHHHHHHHHhc-----------cHHHHHHHHHHhCCHHHHHHHHhh----CCCCCchHHHHHHHHHhCCChHHHHH
Q psy11102 2 TTLVSQAREYYEKCH-----------CYEKLISVYTELGDFEALESCARK----LPDSSPLLKPMGEIFVKYGLCEQAVY 66 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~-----------n~~k~ie~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~~F~~~G~~~~Av~ 66 (87)
.++|++|.++|.++- -+..+..+|+..++|+.-....+. -|++...+..+|..+...|..++|++
T Consensus 41 ~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~ 120 (148)
T 2dba_A 41 CGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGDVKALYRRSQALEKLGRLDQAVL 120 (148)
T ss_dssp TTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHTCHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccCHHHHHHHHHHHHHcCCHHHHHH
Confidence 478999999998752 234567889999999876555443 35556778899999999999999999
Q ss_pred HHHhc
Q psy11102 67 VFDKN 71 (87)
Q Consensus 67 aylk~ 71 (87)
.|.++
T Consensus 121 ~~~~a 125 (148)
T 2dba_A 121 DLQRC 125 (148)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98764
No 24
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=96.93 E-value=0.0071 Score=37.31 Aligned_cols=70 Identities=13% Similarity=0.043 Sum_probs=51.0
Q ss_pred chhHHHHHHHHHHhcc--------HHHHHHHHHHhCCHHHHHHHHhh----CCCCCchHHHHHHHHHhCCChHHHHHHHH
Q psy11102 2 TTLVSQAREYYEKCHC--------YEKLISVYTELGDFEALESCARK----LPDSSPLLKPMGEIFVKYGLCEQAVYVFD 69 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n--------~~k~ie~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~~F~~~G~~~~Av~ayl 69 (87)
.++|++|..+|.++-. +..+..+|...|+|+.-....+. -|++...+..+|..+...|..++|++.|.
T Consensus 31 ~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~ 110 (142)
T 2xcb_A 31 AGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDINEPRFPFHAAECHLQLGDLDGAESGFY 110 (142)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 4678888888876521 34567788888888875554443 35566778888999999999999998887
Q ss_pred hc
Q psy11102 70 KN 71 (87)
Q Consensus 70 k~ 71 (87)
++
T Consensus 111 ~a 112 (142)
T 2xcb_A 111 SA 112 (142)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 25
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=96.89 E-value=0.0042 Score=38.20 Aligned_cols=70 Identities=21% Similarity=0.244 Sum_probs=49.1
Q ss_pred chhHHHHHHHHHHhcc--------HHHHHHHHHHhCCHHHHHHHHhhC----CCCC-------chHHHHHHHHHhCCChH
Q psy11102 2 TTLVSQAREYYEKCHC--------YEKLISVYTELGDFEALESCARKL----PDSS-------PLLKPMGEIFVKYGLCE 62 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n--------~~k~ie~~~~~ed~d~L~~l~~~L----~~~~-------~lL~~ia~~F~~~G~~~ 62 (87)
.++|++|+++|.++=. +..+..||+.+|+|++-.+..+.. |+.. ..+..+|..+...|.++
T Consensus 21 ~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~ 100 (127)
T 4gcn_A 21 QKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKAMSRAGNAFQKQNDLS 100 (127)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHHHHHHHHHHHcCCHH
Confidence 4788999999988633 345678889999988765544331 2221 25667888888888888
Q ss_pred HHHHHHHhc
Q psy11102 63 QAVYVFDKN 71 (87)
Q Consensus 63 ~Av~aylk~ 71 (87)
+|++.|.++
T Consensus 101 ~A~~~~~ka 109 (127)
T 4gcn_A 101 LAVQWFHRS 109 (127)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888888653
No 26
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=96.88 E-value=0.0043 Score=40.11 Aligned_cols=70 Identities=19% Similarity=0.178 Sum_probs=54.4
Q ss_pred chhHHHHHHHHHHhcc------------------------HHHHHHHHHHhCCHHHHHHHHhh----CCCCCchHHHHHH
Q psy11102 2 TTLVSQAREYYEKCHC------------------------YEKLISVYTELGDFEALESCARK----LPDSSPLLKPMGE 53 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n------------------------~~k~ie~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~ 53 (87)
.++|++|.++|.++-. +..+..||...++|+.-....+. -|.+...+-.+|.
T Consensus 51 ~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~ 130 (198)
T 2fbn_A 51 KNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGV 130 (198)
T ss_dssp TTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHH
Confidence 4788999999988642 34577888999999876555444 3555678889999
Q ss_pred HHHhCCChHHHHHHHHhc
Q psy11102 54 IFVKYGLCEQAVYVFDKN 71 (87)
Q Consensus 54 ~F~~~G~~~~Av~aylk~ 71 (87)
.+...|..+.|++.|.++
T Consensus 131 ~~~~~~~~~~A~~~~~~a 148 (198)
T 2fbn_A 131 ANMYFGFLEEAKENLYKA 148 (198)
T ss_dssp HHHHHTCHHHHHHHHHHH
T ss_pred HHHHcccHHHHHHHHHHH
Confidence 999999999999988765
No 27
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=96.87 E-value=0.0099 Score=36.16 Aligned_cols=70 Identities=10% Similarity=0.001 Sum_probs=51.2
Q ss_pred chhHHHHHHHHHHhcc--------HHHHHHHHHHhCCHHHHHHHHhh----CCCCCchHHHHHHHHHhCCChHHHHHHHH
Q psy11102 2 TTLVSQAREYYEKCHC--------YEKLISVYTELGDFEALESCARK----LPDSSPLLKPMGEIFVKYGLCEQAVYVFD 69 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n--------~~k~ie~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~~F~~~G~~~~Av~ayl 69 (87)
.++|++|..+|.++-. +..+..++...++|+.-.+..+. -|.+...+..+|..+...|..++|++.|.
T Consensus 26 ~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~ 105 (166)
T 1a17_A 26 AKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYE 105 (166)
T ss_dssp TTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 4678888888887533 34567788888888875554433 35555778888999999999999988886
Q ss_pred hc
Q psy11102 70 KN 71 (87)
Q Consensus 70 k~ 71 (87)
++
T Consensus 106 ~a 107 (166)
T 1a17_A 106 TV 107 (166)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 28
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=96.76 E-value=0.0055 Score=35.85 Aligned_cols=70 Identities=17% Similarity=0.125 Sum_probs=51.1
Q ss_pred chhHHHHHHHHHHhcc--------HHHHHHHHHHhCCHHHHHHHHhh----CCCCCchHHHHHHHHHhCCChHHHHHHHH
Q psy11102 2 TTLVSQAREYYEKCHC--------YEKLISVYTELGDFEALESCARK----LPDSSPLLKPMGEIFVKYGLCEQAVYVFD 69 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n--------~~k~ie~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~~F~~~G~~~~Av~ayl 69 (87)
.++|++|..+|.++-. +..+..++...++|++-.+..+. -|.+...+..+|..+...|..++|++.|.
T Consensus 29 ~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~ 108 (133)
T 2lni_A 29 KGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTFIKGYTRKAAALEAMKDYTKAMDVYQ 108 (133)
T ss_dssp TTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 4678888888887532 34567778888888875554443 35555778888999999999999988887
Q ss_pred hc
Q psy11102 70 KN 71 (87)
Q Consensus 70 k~ 71 (87)
++
T Consensus 109 ~~ 110 (133)
T 2lni_A 109 KA 110 (133)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 29
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=96.75 E-value=0.01 Score=39.12 Aligned_cols=66 Identities=18% Similarity=0.279 Sum_probs=34.0
Q ss_pred hhHHHHHHHHHHh--------ccHHHHHHHHHHhCCHHHHHHHHhh---CCCCCch----HHHHHHHHHhCCChHHHHHH
Q psy11102 3 TLVSQAREYYEKC--------HCYEKLISVYTELGDFEALESCARK---LPDSSPL----LKPMGEIFVKYGLCEQAVYV 67 (87)
Q Consensus 3 ~~w~~A~~yY~~~--------~n~~k~ie~~~~~ed~d~L~~l~~~---L~~~~~l----L~~ia~~F~~~G~~~~Av~a 67 (87)
++|++|.++|.++ .-+..+..+|+..|+|+.-.+..+. .|++... +..+|..+...|..++|++.
T Consensus 17 ~~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~ 96 (272)
T 3u4t_A 17 NNYAEAIEVFNKLEAKKYNSPYIYNRRAVCYYELAKYDLAQKDIETYFSKVNATKAKSADFEYYGKILMKKGQDSLAIQQ 96 (272)
T ss_dssp TCHHHHHHHHHHHHHTTCCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHTTSCTTTCCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHcccHHHHHHH
Confidence 4556666666553 1344555566666666554443333 2222222 45566666666666666554
Q ss_pred H
Q psy11102 68 F 68 (87)
Q Consensus 68 y 68 (87)
|
T Consensus 97 ~ 97 (272)
T 3u4t_A 97 Y 97 (272)
T ss_dssp H
T ss_pred H
Confidence 3
No 30
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=96.73 E-value=0.012 Score=37.15 Aligned_cols=70 Identities=9% Similarity=0.028 Sum_probs=53.6
Q ss_pred chhHHHHHHHHHHhcc--------HHHHHHHHHHhCCHHHHHHHHhh----CCCCCchHHHHHHHHHhCCChHHHHHHHH
Q psy11102 2 TTLVSQAREYYEKCHC--------YEKLISVYTELGDFEALESCARK----LPDSSPLLKPMGEIFVKYGLCEQAVYVFD 69 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n--------~~k~ie~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~~F~~~G~~~~Av~ayl 69 (87)
.++|++|..+|.++-. +..+..++...|+|++-....+. -|++...+-.+|..+...|..++|++.|.
T Consensus 34 ~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~~A~~~~~ 113 (148)
T 2vgx_A 34 SGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMDIXEPRFPFHAAECLLQXGELAEAESGLF 113 (148)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHcCCHHHHHHHHH
Confidence 4678888888887522 23567788899999876555444 36667888899999999999999999987
Q ss_pred hc
Q psy11102 70 KN 71 (87)
Q Consensus 70 k~ 71 (87)
++
T Consensus 114 ~a 115 (148)
T 2vgx_A 114 LA 115 (148)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 31
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=96.72 E-value=0.0098 Score=33.59 Aligned_cols=70 Identities=11% Similarity=0.110 Sum_probs=50.7
Q ss_pred chhHHHHHHHHHHhcc--------HHHHHHHHHHhCCHHHHHHHHhh----CCC--CCchHHHHHHHHHhC-CChHHHHH
Q psy11102 2 TTLVSQAREYYEKCHC--------YEKLISVYTELGDFEALESCARK----LPD--SSPLLKPMGEIFVKY-GLCEQAVY 66 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n--------~~k~ie~~~~~ed~d~L~~l~~~----L~~--~~~lL~~ia~~F~~~-G~~~~Av~ 66 (87)
.++|++|..+|.++-. +-.+..+++..++|++-.+..+. -|. ....+..+|..+... |..++|++
T Consensus 19 ~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~ 98 (112)
T 2kck_A 19 AGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKADALRYIEGKEVEAEI 98 (112)
T ss_dssp SCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHHHHHTTCSSCSHHHHH
T ss_pred hhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHhCCHHHHHH
Confidence 4678888888887632 23567788888998876554443 355 457788888888888 88888888
Q ss_pred HHHhc
Q psy11102 67 VFDKN 71 (87)
Q Consensus 67 aylk~ 71 (87)
.|.+.
T Consensus 99 ~~~~~ 103 (112)
T 2kck_A 99 AEARA 103 (112)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87654
No 32
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=96.68 E-value=0.011 Score=37.23 Aligned_cols=68 Identities=22% Similarity=0.276 Sum_probs=41.2
Q ss_pred hhHHHHHHHHHHhcc--------HHHHHHHHHHhCCHHHHHHHHh----hCCCCCchHHHHHHHHHhCCChHHHHHHHHh
Q psy11102 3 TLVSQAREYYEKCHC--------YEKLISVYTELGDFEALESCAR----KLPDSSPLLKPMGEIFVKYGLCEQAVYVFDK 70 (87)
Q Consensus 3 ~~w~~A~~yY~~~~n--------~~k~ie~~~~~ed~d~L~~l~~----~L~~~~~lL~~ia~~F~~~G~~~~Av~aylk 70 (87)
++|+.|.++|.++-. ...+..+|...|+|++-.+..+ .-|.+...+..+|..+...|..++|++.|.+
T Consensus 87 ~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~ 166 (184)
T 3vtx_A 87 DEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGLRDEAVKYFKK 166 (184)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 455566666555432 2345566666777665443333 2344556677777777777777777777765
No 33
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=96.63 E-value=0.012 Score=37.70 Aligned_cols=69 Identities=10% Similarity=0.049 Sum_probs=52.9
Q ss_pred chhHHHHHHHHHHhcc-----HHHHHHHHHHhCCHHHHHHHHhh----CCCCCchHHHHHHHHHhCCChHHHHHHHHh
Q psy11102 2 TTLVSQAREYYEKCHC-----YEKLISVYTELGDFEALESCARK----LPDSSPLLKPMGEIFVKYGLCEQAVYVFDK 70 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n-----~~k~ie~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~~F~~~G~~~~Av~aylk 70 (87)
.++|++|.++|.++-+ +-.+..+|+..|+|++-.+..+. -|.....+..+|..+...|..++|++.|.+
T Consensus 19 ~~~~~~A~~~~~~a~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~ 96 (213)
T 1hh8_A 19 KKDWKGALDAFSAVQDPHSRICFNIGCMYTILKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQTEKYDLAIKDLKE 96 (213)
T ss_dssp TTCHHHHHHHHHTSSSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 4688889998887643 45567788899999876655544 255567788999999999999999877754
No 34
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=96.59 E-value=0.015 Score=38.19 Aligned_cols=70 Identities=17% Similarity=0.045 Sum_probs=50.6
Q ss_pred chhHHHHHHHHHHhcc--------HHHHHHHHHHhCCHHHHHHHHhh----CCCCCchHHHHHHHHHhCCChHHHHHHHH
Q psy11102 2 TTLVSQAREYYEKCHC--------YEKLISVYTELGDFEALESCARK----LPDSSPLLKPMGEIFVKYGLCEQAVYVFD 69 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n--------~~k~ie~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~~F~~~G~~~~Av~ayl 69 (87)
.++|++|.++|.++-. +..++.+|...|+|++-.+..+. -|.+...+..+|..+...|..++|++.|.
T Consensus 56 ~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 135 (275)
T 1xnf_A 56 LGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLL 135 (275)
T ss_dssp TTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCccccHHHHHHHHHHHHhccHHHHHHHHH
Confidence 3677888888877532 34567788888888765554444 35556778888888888888888888886
Q ss_pred hc
Q psy11102 70 KN 71 (87)
Q Consensus 70 k~ 71 (87)
++
T Consensus 136 ~a 137 (275)
T 1xnf_A 136 AF 137 (275)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 35
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=96.56 E-value=0.0096 Score=42.54 Aligned_cols=70 Identities=21% Similarity=0.293 Sum_probs=57.7
Q ss_pred chhHHHHHHHHHHhcc-------HHHHHHHHHHhCCHHHHHHHHhh----CCCCCchHHHHHHHHHhCCChHHHHHHHHh
Q psy11102 2 TTLVSQAREYYEKCHC-------YEKLISVYTELGDFEALESCARK----LPDSSPLLKPMGEIFVKYGLCEQAVYVFDK 70 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n-------~~k~ie~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~~F~~~G~~~~Av~aylk 70 (87)
.++|++|+.+|.++-. +..++.|+...|+|+.-....+. -|.+...+..+|..+...|..++|+..|.+
T Consensus 19 ~g~~~~A~~~~~~al~~~p~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 98 (514)
T 2gw1_A 19 NKKYDDAIKYYNWALELKEDPVFYSNLSACYVSVGDLKKVVEMSTKALELKPDYSKVLLRRASANEGLGKFADAMFDLSV 98 (514)
T ss_dssp TSCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHhcCccHHHHHhHHHHHHHHhhHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 4789999999998743 66788999999999887666654 355567889999999999999999999976
Q ss_pred c
Q psy11102 71 N 71 (87)
Q Consensus 71 ~ 71 (87)
+
T Consensus 99 ~ 99 (514)
T 2gw1_A 99 L 99 (514)
T ss_dssp H
T ss_pred H
Confidence 5
No 36
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=96.53 E-value=0.024 Score=34.51 Aligned_cols=67 Identities=16% Similarity=0.175 Sum_probs=36.5
Q ss_pred hhHHHHHHHHHHhccH--------HHHHHHHHHhCCHHHHHHHHhh----CCCCCchHHHHHHHHHhCCChHHHHHHHH
Q psy11102 3 TLVSQAREYYEKCHCY--------EKLISVYTELGDFEALESCARK----LPDSSPLLKPMGEIFVKYGLCEQAVYVFD 69 (87)
Q Consensus 3 ~~w~~A~~yY~~~~n~--------~k~ie~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~~F~~~G~~~~Av~ayl 69 (87)
+++++|.++|.++-.. ..++.++...++++.-.+..+. -|.+...+..+|..+...|..++|++.|.
T Consensus 56 ~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~ 134 (186)
T 3as5_A 56 GAVDRGTELLERSLADAPDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGRFDEAIDSFK 134 (186)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcCcHHHHHHHHH
Confidence 4566666666554321 2345556666666654443333 23344556666666666666666655543
No 37
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=96.51 E-value=0.018 Score=37.79 Aligned_cols=69 Identities=17% Similarity=0.120 Sum_probs=54.4
Q ss_pred chhHHHHHHHHHHhccH------------HHHHHHHHHhCCHHHHHHHHhh----CCCCCchHHHHHHHHHhCCChHHHH
Q psy11102 2 TTLVSQAREYYEKCHCY------------EKLISVYTELGDFEALESCARK----LPDSSPLLKPMGEIFVKYGLCEQAV 65 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n~------------~k~ie~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~~F~~~G~~~~Av 65 (87)
.++|++|.++|.++-.. ..+..+++..|+|+.-.+..+. -|.+...+..+|..+...|..++|+
T Consensus 18 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~ 97 (275)
T 1xnf_A 18 TLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYLGIYLTQAGNFDAAY 97 (275)
T ss_dssp CHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHH
T ss_pred cchHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHccCHHHHH
Confidence 47899999999987653 3567888899999876655554 3556688899999999999999998
Q ss_pred HHHHh
Q psy11102 66 YVFDK 70 (87)
Q Consensus 66 ~aylk 70 (87)
..|.+
T Consensus 98 ~~~~~ 102 (275)
T 1xnf_A 98 EAFDS 102 (275)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 76643
No 38
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=96.49 E-value=0.016 Score=37.48 Aligned_cols=69 Identities=13% Similarity=0.051 Sum_probs=43.0
Q ss_pred hhHHHHHHHHHHhcc--------HHHHHHHHHHhCCHHHHHHHHhh----CCCCCchHHHHHHHHHhCCChHHHHHHHHh
Q psy11102 3 TLVSQAREYYEKCHC--------YEKLISVYTELGDFEALESCARK----LPDSSPLLKPMGEIFVKYGLCEQAVYVFDK 70 (87)
Q Consensus 3 ~~w~~A~~yY~~~~n--------~~k~ie~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~~F~~~G~~~~Av~aylk 70 (87)
++|++|.++|.++-. +..+..++...|+|+.-.+..+. -|++...+..+|..+...|..++|++.|.+
T Consensus 153 ~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 232 (258)
T 3uq3_A 153 SDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNFVRAYIRKATAQIAVKEYASALETLDA 232 (258)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 566677776666532 34556667777777665544443 244446666777777777777777776665
Q ss_pred c
Q psy11102 71 N 71 (87)
Q Consensus 71 ~ 71 (87)
+
T Consensus 233 a 233 (258)
T 3uq3_A 233 A 233 (258)
T ss_dssp H
T ss_pred H
Confidence 4
No 39
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=96.48 E-value=0.015 Score=38.94 Aligned_cols=71 Identities=18% Similarity=0.223 Sum_probs=55.8
Q ss_pred chhHHHHHHHHHHhccH-----------------HHHHHHHHHhCCHHHHHHHHhh----CCCCCchHHHHHHHHHhCCC
Q psy11102 2 TTLVSQAREYYEKCHCY-----------------EKLISVYTELGDFEALESCARK----LPDSSPLLKPMGEIFVKYGL 60 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n~-----------------~k~ie~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~~F~~~G~ 60 (87)
.++|++|..+|.++-.. ..+..++...|+++.-.+..+. -|++...+..+|..+...|.
T Consensus 206 ~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~ 285 (330)
T 3hym_B 206 NGEWKTAEKWFLDALEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLIPQNASTYSAIGYIHSLMGN 285 (330)
T ss_dssp TTCHHHHHHHHHHHHHHHTTTSCSCTTTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTC
T ss_pred cccHHHHHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhCccchHHHHHHHHHHHHhcc
Confidence 46788888888877554 3678888899998876665554 35566888999999999999
Q ss_pred hHHHHHHHHhcC
Q psy11102 61 CEQAVYVFDKNK 72 (87)
Q Consensus 61 ~~~Av~aylk~g 72 (87)
.++|++.|.++=
T Consensus 286 ~~~A~~~~~~al 297 (330)
T 3hym_B 286 FENAVDYFHTAL 297 (330)
T ss_dssp HHHHHHHHHTTT
T ss_pred HHHHHHHHHHHH
Confidence 999999998763
No 40
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=96.48 E-value=0.01 Score=34.31 Aligned_cols=70 Identities=19% Similarity=0.299 Sum_probs=49.2
Q ss_pred chhHHHHHHHHHHhcc--------HHHHHHHHHHhCCHHHHHHHHhhC----CCC-------CchHHHHHHHHHhCCChH
Q psy11102 2 TTLVSQAREYYEKCHC--------YEKLISVYTELGDFEALESCARKL----PDS-------SPLLKPMGEIFVKYGLCE 62 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n--------~~k~ie~~~~~ed~d~L~~l~~~L----~~~-------~~lL~~ia~~F~~~G~~~ 62 (87)
.++|++|..+|.++-. +-.+..++...++|+.-....+.. |.. ...+..+|..+...|..+
T Consensus 17 ~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~ 96 (131)
T 1elr_A 17 KKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYARIGNSYFKEEKYK 96 (131)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHTTCHH
T ss_pred hcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHhccHH
Confidence 4678888888887633 345677888888888755544432 322 445777888888888888
Q ss_pred HHHHHHHhc
Q psy11102 63 QAVYVFDKN 71 (87)
Q Consensus 63 ~Av~aylk~ 71 (87)
.|++.|.++
T Consensus 97 ~A~~~~~~~ 105 (131)
T 1elr_A 97 DAIHFYNKS 105 (131)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888888654
No 41
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=96.47 E-value=0.0075 Score=37.98 Aligned_cols=68 Identities=15% Similarity=0.168 Sum_probs=52.8
Q ss_pred chhHHHHHHHHHHhcc--------HHHHHHHHHHhCCHHHHHHHHhh----CCCCCchHHHHHHHHHhCCChHHHHHHHH
Q psy11102 2 TTLVSQAREYYEKCHC--------YEKLISVYTELGDFEALESCARK----LPDSSPLLKPMGEIFVKYGLCEQAVYVFD 69 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n--------~~k~ie~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~~F~~~G~~~~Av~ayl 69 (87)
.++|++|.++|.++=. +..+..+|...|+++.-....+. -|++...+..+|..+...|..++|++.|+
T Consensus 44 ~~~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~aa~~~~ 123 (150)
T 4ga2_A 44 AKEYDLAKKYICTYINVQERDPKAHRFLGLLYELEENTDKAVECYRRSVELNPTQKDLVLKIAELLCKNDVTDGRAKYWV 123 (150)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCSSSSHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCchHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCChHHHHHHHH
Confidence 4788899999888632 34577888999999876655544 35566889999999999999998888874
No 42
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=96.44 E-value=0.017 Score=37.62 Aligned_cols=69 Identities=14% Similarity=0.235 Sum_probs=40.9
Q ss_pred hhHHHHHHHHHHhcc--------HHHHHHHHHHhCCHHHHHHHHhh----CCCCC-------chHHHHHHHHHhCCChHH
Q psy11102 3 TLVSQAREYYEKCHC--------YEKLISVYTELGDFEALESCARK----LPDSS-------PLLKPMGEIFVKYGLCEQ 63 (87)
Q Consensus 3 ~~w~~A~~yY~~~~n--------~~k~ie~~~~~ed~d~L~~l~~~----L~~~~-------~lL~~ia~~F~~~G~~~~ 63 (87)
++|++|.++|.++-. +..+..+|...|+|++-.+..+. -|++. .....+|..+...|..++
T Consensus 56 ~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 135 (228)
T 4i17_A 56 KKYKEAADYFDIAIKKNYNLANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGNATIEKLYAIYYLKEGQKFQQAGNIEK 135 (228)
T ss_dssp TCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred hcHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHhHHHHHhccHHH
Confidence 566677777666522 34556667777777665544443 24433 235566666666677777
Q ss_pred HHHHHHhc
Q psy11102 64 AVYVFDKN 71 (87)
Q Consensus 64 Av~aylk~ 71 (87)
|++.|.++
T Consensus 136 A~~~~~~a 143 (228)
T 4i17_A 136 AEENYKHA 143 (228)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77666554
No 43
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=96.42 E-value=0.0078 Score=39.29 Aligned_cols=69 Identities=4% Similarity=-0.055 Sum_probs=52.2
Q ss_pred chhHHHHHHHHHHhccHH---------HHHHHHHHhCCHHHHHHHHhhC----CCCCchHHHHHHHHHhCCChHHHHHHH
Q psy11102 2 TTLVSQAREYYEKCHCYE---------KLISVYTELGDFEALESCARKL----PDSSPLLKPMGEIFVKYGLCEQAVYVF 68 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n~~---------k~ie~~~~~ed~d~L~~l~~~L----~~~~~lL~~ia~~F~~~G~~~~Av~ay 68 (87)
.++|++|.++|.++=... .+..|++..|+|++-.+..+.. |.....+..+|..+...|..++|++.|
T Consensus 20 ~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~~~~~~A~~~~ 99 (228)
T 4i17_A 20 AKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYKEAADYFDIAIKKNYNLANAYIGKSAAYRDMKNNQEYIATL 99 (228)
T ss_dssp TTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCSHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHcccHHHHHHHH
Confidence 478888999888764433 3678888999998766655542 344577889999999999999998877
Q ss_pred Hh
Q psy11102 69 DK 70 (87)
Q Consensus 69 lk 70 (87)
.+
T Consensus 100 ~~ 101 (228)
T 4i17_A 100 TE 101 (228)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 44
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=96.41 E-value=0.013 Score=42.73 Aligned_cols=70 Identities=13% Similarity=0.082 Sum_probs=55.7
Q ss_pred chhHHHHHHHHHHhcc------------------------HHHHHHHHHHhCCHHHHHHHHhhC----CCCCchHHHHHH
Q psy11102 2 TTLVSQAREYYEKCHC------------------------YEKLISVYTELGDFEALESCARKL----PDSSPLLKPMGE 53 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n------------------------~~k~ie~~~~~ed~d~L~~l~~~L----~~~~~lL~~ia~ 53 (87)
.++|++|.++|.++=. +..+..||+++++|++-.+..+.. |++...+-.+|.
T Consensus 236 ~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~ 315 (370)
T 1ihg_A 236 SQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAVDSCLEALEIDPSNTKALYRRAQ 315 (370)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTCHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHhCchhHHHHHHHHH
Confidence 4789999999988765 235678899999998766655542 445688999999
Q ss_pred HHHhCCChHHHHHHHHhc
Q psy11102 54 IFVKYGLCEQAVYVFDKN 71 (87)
Q Consensus 54 ~F~~~G~~~~Av~aylk~ 71 (87)
.+...|..++|++.|.++
T Consensus 316 ~~~~~g~~~eA~~~l~~A 333 (370)
T 1ihg_A 316 GWQGLKEYDQALADLKKA 333 (370)
T ss_dssp HHHHTTCHHHHHHHHHHH
T ss_pred HHHHccCHHHHHHHHHHH
Confidence 999999999999998764
No 45
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=96.39 E-value=0.02 Score=36.98 Aligned_cols=51 Identities=12% Similarity=0.029 Sum_probs=34.5
Q ss_pred HHHHHHHHhCCHHHHHHHHhh----CCCCCchHHHHHHHHHhCCChHHHHHHHHh
Q psy11102 20 KLISVYTELGDFEALESCARK----LPDSSPLLKPMGEIFVKYGLCEQAVYVFDK 70 (87)
Q Consensus 20 k~ie~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~~F~~~G~~~~Av~aylk 70 (87)
.+..++...|+|+.-.+..+. -|.+...+..+|..+...|..++|++.|.+
T Consensus 144 ~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~ 198 (258)
T 3uq3_A 144 LEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNK 198 (258)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 456677777887765555444 244556677888888888888887766543
No 46
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=96.36 E-value=0.015 Score=41.49 Aligned_cols=70 Identities=23% Similarity=0.105 Sum_probs=52.7
Q ss_pred chhHHHHHHHHHHhc-----------------------cHHHHHHHHHHhCCHHHHHHHHhhC----CCCCchHHHHHHH
Q psy11102 2 TTLVSQAREYYEKCH-----------------------CYEKLISVYTELGDFEALESCARKL----PDSSPLLKPMGEI 54 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~-----------------------n~~k~ie~~~~~ed~d~L~~l~~~L----~~~~~lL~~ia~~ 54 (87)
.++|++|+.+|.++= -+-.+..||...++|+.-....+.. |.+...+..+|..
T Consensus 160 ~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~ 239 (336)
T 1p5q_A 160 EGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEA 239 (336)
T ss_dssp HTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 367888888887652 2345677888889988766655542 5566888899999
Q ss_pred HHhCCChHHHHHHHHhc
Q psy11102 55 FVKYGLCEQAVYVFDKN 71 (87)
Q Consensus 55 F~~~G~~~~Av~aylk~ 71 (87)
+...|..++|+..|.++
T Consensus 240 ~~~~g~~~~A~~~~~~a 256 (336)
T 1p5q_A 240 HLAVNDFELARADFQKV 256 (336)
T ss_dssp HHHTTCHHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHHH
Confidence 99999999999888764
No 47
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=96.35 E-value=0.037 Score=35.27 Aligned_cols=70 Identities=10% Similarity=0.083 Sum_probs=54.0
Q ss_pred chhHHHHHHHHHHhcc--------HHHHHHHHHHhCCHHHHHHHH----hhCCCCC----------------chHHHHHH
Q psy11102 2 TTLVSQAREYYEKCHC--------YEKLISVYTELGDFEALESCA----RKLPDSS----------------PLLKPMGE 53 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n--------~~k~ie~~~~~ed~d~L~~l~----~~L~~~~----------------~lL~~ia~ 53 (87)
.++|++|.++|.++-. +-.+..+|+..|+|++-.+.. +..|++. ..+..+|.
T Consensus 50 ~g~~~~A~~~~~~al~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (213)
T 1hh8_A 50 LKNMTEAEKAFTRSINRDKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAF 129 (213)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHH
Confidence 4788999999988642 345678899999998755444 3345544 67889999
Q ss_pred HHHhCCChHHHHHHHHhc
Q psy11102 54 IFVKYGLCEQAVYVFDKN 71 (87)
Q Consensus 54 ~F~~~G~~~~Av~aylk~ 71 (87)
.+...|..+.|++.|.++
T Consensus 130 ~~~~~g~~~~A~~~~~~a 147 (213)
T 1hh8_A 130 MYAKKEEWKKAEEQLALA 147 (213)
T ss_dssp HHHHTTCHHHHHHHHHHH
T ss_pred HHHHccCHHHHHHHHHHH
Confidence 999999999999998764
No 48
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=96.35 E-value=0.019 Score=38.69 Aligned_cols=70 Identities=14% Similarity=0.199 Sum_probs=52.3
Q ss_pred chhHHHHHHHHHHhcc------------HHHHHHHHHHhCCHHHHHHHHhhC----CCCCchHHHHHHHHHhCCChHHHH
Q psy11102 2 TTLVSQAREYYEKCHC------------YEKLISVYTELGDFEALESCARKL----PDSSPLLKPMGEIFVKYGLCEQAV 65 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n------------~~k~ie~~~~~ed~d~L~~l~~~L----~~~~~lL~~ia~~F~~~G~~~~Av 65 (87)
.++|++|.++|.++-. +..+..++...|+++.-.+..+.. |++...+..+|..+...|..++|+
T Consensus 247 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~ 326 (359)
T 3ieg_A 247 DGRYTDATSKYESVMKTEPSVAEYTVRSKERICHCFSKDEKPVEAIRICSEVLQMEPDNVNALKDRAEAYLIEEMYDEAI 326 (359)
T ss_dssp TTCHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred cCCHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCCHHHHH
Confidence 3677888888876533 234667888899988776666553 445578889999999999999999
Q ss_pred HHHHhc
Q psy11102 66 YVFDKN 71 (87)
Q Consensus 66 ~aylk~ 71 (87)
+.|.++
T Consensus 327 ~~~~~a 332 (359)
T 3ieg_A 327 QDYEAA 332 (359)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988764
No 49
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=96.33 E-value=0.035 Score=33.75 Aligned_cols=70 Identities=17% Similarity=0.164 Sum_probs=53.6
Q ss_pred chhHHHHHHHHHHhcc--------HHHHHHHHHHhCCHHHHHHHHhh----CCCCCchHHHHHHHHHhCCChHHHHHHHH
Q psy11102 2 TTLVSQAREYYEKCHC--------YEKLISVYTELGDFEALESCARK----LPDSSPLLKPMGEIFVKYGLCEQAVYVFD 69 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n--------~~k~ie~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~~F~~~G~~~~Av~ayl 69 (87)
.++|++|.++|.++-. +-.++.+++..|+++.-.+..+. -|.+...+..+|..+...|..+.|++.|.
T Consensus 89 ~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~ 168 (186)
T 3as5_A 89 VQKYDLAVPLLIKVAEANPINFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNEGKVHRAIAFSYEQMGRHEEALPHFK 168 (186)
T ss_dssp HTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHhcCcHhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccchHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 3678899998887632 34567889999999876555444 35556778899999999999999999887
Q ss_pred hc
Q psy11102 70 KN 71 (87)
Q Consensus 70 k~ 71 (87)
++
T Consensus 169 ~~ 170 (186)
T 3as5_A 169 KA 170 (186)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 50
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=96.33 E-value=0.025 Score=35.69 Aligned_cols=49 Identities=20% Similarity=0.271 Sum_probs=22.2
Q ss_pred HHHHHHHhCCHHHHHHHHhh----CCCCCchHHHHHHHHHhCCChHHHHHHHH
Q psy11102 21 LISVYTELGDFEALESCARK----LPDSSPLLKPMGEIFVKYGLCEQAVYVFD 69 (87)
Q Consensus 21 ~ie~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~~F~~~G~~~~Av~ayl 69 (87)
++.++...|++++-.+..+. -|.+...+..+|..+...|..++|.+.|.
T Consensus 119 l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~ 171 (225)
T 2vq2_A 119 KGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKMLAGQLGDADYYFK 171 (225)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHcCCHHHHHHHHH
Confidence 44455555555443332222 23333444555555555555555554443
No 51
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=96.33 E-value=0.028 Score=32.18 Aligned_cols=70 Identities=24% Similarity=0.357 Sum_probs=49.1
Q ss_pred chhHHHHHHHHHHhcc--------HHHHHHHHHHhCCHHHHHHHHhh----CCCCCchHHHHHHHHHhCCChHHHHHHHH
Q psy11102 2 TTLVSQAREYYEKCHC--------YEKLISVYTELGDFEALESCARK----LPDSSPLLKPMGEIFVKYGLCEQAVYVFD 69 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n--------~~k~ie~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~~F~~~G~~~~Av~ayl 69 (87)
.++|++|..+|.++-. +-.++.++...|+++.-.+..+. -|.....+..+|..+...|..++|+..|.
T Consensus 48 ~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~ 127 (136)
T 2fo7_A 48 QGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRSAEAWYNLGNAYYKQGDYDEAIEYYQ 127 (136)
T ss_dssp HTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHccHHHHHHHHH
Confidence 3578888888877632 34567788889998875544443 35555667778888888888888887775
Q ss_pred hc
Q psy11102 70 KN 71 (87)
Q Consensus 70 k~ 71 (87)
++
T Consensus 128 ~~ 129 (136)
T 2fo7_A 128 KA 129 (136)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 52
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=96.32 E-value=0.024 Score=35.56 Aligned_cols=70 Identities=13% Similarity=0.045 Sum_probs=47.2
Q ss_pred chhHHHHHHHHHHhccH--------HHHHHH-HHHhCCH--HHHHHH----HhhCCCCCchHHHHHHHHHhCCChHHHHH
Q psy11102 2 TTLVSQAREYYEKCHCY--------EKLISV-YTELGDF--EALESC----ARKLPDSSPLLKPMGEIFVKYGLCEQAVY 66 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n~--------~k~ie~-~~~~ed~--d~L~~l----~~~L~~~~~lL~~ia~~F~~~G~~~~Av~ 66 (87)
.++|++|..+|.++-.. ..+..+ ++..+++ +.-... +..-|.+...+..+|..+...|..++|+.
T Consensus 57 ~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~ 136 (177)
T 2e2e_A 57 QNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALMLLASDAFMQANYAQAIE 136 (177)
T ss_dssp TTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcccHHHHHH
Confidence 36788888888776432 245566 6677886 543333 33335556777888888888888888888
Q ss_pred HHHhc
Q psy11102 67 VFDKN 71 (87)
Q Consensus 67 aylk~ 71 (87)
.|.++
T Consensus 137 ~~~~a 141 (177)
T 2e2e_A 137 LWQKV 141 (177)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87653
No 53
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=96.31 E-value=0.01 Score=39.23 Aligned_cols=50 Identities=18% Similarity=0.204 Sum_probs=16.1
Q ss_pred HHHHHHHhCCHHHHHHHHhh----CCCCCchHHHHHHHHHhCCChHHHHHHHHh
Q psy11102 21 LISVYTELGDFEALESCARK----LPDSSPLLKPMGEIFVKYGLCEQAVYVFDK 70 (87)
Q Consensus 21 ~ie~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~~F~~~G~~~~Av~aylk 70 (87)
+..+|...|++++-....+. -|++...+..+|..+...|..++|++.|.+
T Consensus 157 la~~~~~~g~~~~A~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~ 210 (217)
T 2pl2_A 157 LAELYLSMGRLDEALAQYAKALEQAPKDLDLRVRYASALLLKGKAEEAARAAAL 210 (217)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHTC-------------
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHccCHHHHHHHHHH
Confidence 34444555555443222222 233334445555555555555555555444
No 54
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=96.30 E-value=0.039 Score=35.92 Aligned_cols=48 Identities=13% Similarity=0.029 Sum_probs=22.2
Q ss_pred HHHHHHHhCCHHHHHHHHhh----CCCCCchHHHHHHHHHhCCChHHHHHHH
Q psy11102 21 LISVYTELGDFEALESCARK----LPDSSPLLKPMGEIFVKYGLCEQAVYVF 68 (87)
Q Consensus 21 ~ie~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~~F~~~G~~~~Av~ay 68 (87)
++.+++..|+++.-.+..+. -|.+...+..+|..+...|..++|++.|
T Consensus 147 la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~ 198 (252)
T 2ho1_A 147 LGLVSLQMKKPAQAKEYFEKSLRLNRNQPSVALEMADLLYKEREYVPARQYY 198 (252)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 34455555555443333322 2333344555555555555555554443
No 55
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=96.22 E-value=0.03 Score=35.13 Aligned_cols=67 Identities=16% Similarity=0.087 Sum_probs=47.4
Q ss_pred chhHHHHHHHHHHhcc--------HHHHHHHHHHhCCHHHHHHHHhhC----CCCCchHHHHHHHHHhCCChHHHHHHH
Q psy11102 2 TTLVSQAREYYEKCHC--------YEKLISVYTELGDFEALESCARKL----PDSSPLLKPMGEIFVKYGLCEQAVYVF 68 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n--------~~k~ie~~~~~ed~d~L~~l~~~L----~~~~~lL~~ia~~F~~~G~~~~Av~ay 68 (87)
.|+|++|.++|.++=. +..+..+|...|+++.-....... |+.......+|..+...|..+.|++.|
T Consensus 18 ~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 96 (184)
T 3vtx_A 18 KGDFDGAIRAYKKVLKADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILGSANFMIDEKQAAIDAL 96 (184)
T ss_dssp HTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 4788888888888632 346677888888888766555543 344566777788888888877777654
No 56
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=96.22 E-value=0.037 Score=36.99 Aligned_cols=69 Identities=17% Similarity=0.107 Sum_probs=47.7
Q ss_pred chhHHHHHHHHHHhcc--------HHHHHHHHHHhCCHHHHHHHHhhC----CCCCchHHHHHHHHHhCC-ChHHHHHHH
Q psy11102 2 TTLVSQAREYYEKCHC--------YEKLISVYTELGDFEALESCARKL----PDSSPLLKPMGEIFVKYG-LCEQAVYVF 68 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n--------~~k~ie~~~~~ed~d~L~~l~~~L----~~~~~lL~~ia~~F~~~G-~~~~Av~ay 68 (87)
.++|++|.++|.+.-. ....+.+++..|++++...+.+.+ |.+...+..+|..+...| ..++|++.|
T Consensus 35 ~g~~~~A~~~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~ 114 (330)
T 3hym_B 35 NCDFKMCYKLTSVVMEKDPFHASCLPVHIGTLVELNKANELFYLSHKLVDLYPSNPVSWFAVGCYYLMVGHKNEHARRYL 114 (330)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCTTTHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHHHHHHHHHSCSCHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCCChhhHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 3677788887777521 234667788888888776665543 445577788888888888 788787766
Q ss_pred Hh
Q psy11102 69 DK 70 (87)
Q Consensus 69 lk 70 (87)
.+
T Consensus 115 ~~ 116 (330)
T 3hym_B 115 SK 116 (330)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 57
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=96.19 E-value=0.012 Score=40.73 Aligned_cols=70 Identities=13% Similarity=0.134 Sum_probs=55.8
Q ss_pred chhHHHHHHHHHHhcc--------HHHHHHHHHHhCCHHHHHHHHhhC----CCCCchHHHHHHHHHhCCChHHHHHHHH
Q psy11102 2 TTLVSQAREYYEKCHC--------YEKLISVYTELGDFEALESCARKL----PDSSPLLKPMGEIFVKYGLCEQAVYVFD 69 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n--------~~k~ie~~~~~ed~d~L~~l~~~L----~~~~~lL~~ia~~F~~~G~~~~Av~ayl 69 (87)
.++|++|+.+|.++=. +..+..+|...|+|++-.+..+.. |++...+..+|..+...|..++|+..|.
T Consensus 17 ~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~ 96 (281)
T 2c2l_A 17 GRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQ 96 (281)
T ss_dssp TTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 4788999999987632 345788999999999877766652 3445788999999999999999999987
Q ss_pred hc
Q psy11102 70 KN 71 (87)
Q Consensus 70 k~ 71 (87)
++
T Consensus 97 ~a 98 (281)
T 2c2l_A 97 RA 98 (281)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 58
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=96.14 E-value=0.044 Score=40.22 Aligned_cols=48 Identities=23% Similarity=0.143 Sum_probs=22.5
Q ss_pred HHHHHHHhCCHHHHHHHHhhC---CCCCchHHHHHHHHHhCCChHHHHHHH
Q psy11102 21 LISVYTELGDFEALESCARKL---PDSSPLLKPMGEIFVKYGLCEQAVYVF 68 (87)
Q Consensus 21 ~ie~~~~~ed~d~L~~l~~~L---~~~~~lL~~ia~~F~~~G~~~~Av~ay 68 (87)
++.+|+..|+++.-..+.+.. |.+......+|..+...|..++|++.|
T Consensus 123 l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~ 173 (597)
T 2xpi_A 123 LAQVYCCTGDYARAKCLLTKEDLYNRSSACRYLAAFCLVKLYDWQGALNLL 173 (597)
T ss_dssp HHHHHHHTTCHHHHHHHHHHTCGGGTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHcCcHHHHHHHHHHHhccccchhHHHHHHHHHHHHhhHHHHHHHH
Confidence 444455555555544444443 222334444555555555555554443
No 59
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=96.13 E-value=0.05 Score=35.71 Aligned_cols=71 Identities=13% Similarity=0.089 Sum_probs=57.5
Q ss_pred chhHHHHHHHHHHhcc-----------HHHHHHHHHHhCCHHHHHHHHhhC----CCCCchHHHHHHHHHhCCChHHHHH
Q psy11102 2 TTLVSQAREYYEKCHC-----------YEKLISVYTELGDFEALESCARKL----PDSSPLLKPMGEIFVKYGLCEQAVY 66 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n-----------~~k~ie~~~~~ed~d~L~~l~~~L----~~~~~lL~~ia~~F~~~G~~~~Av~ 66 (87)
.++|++|.++|.++-. +..+..++...|+|+.-.+..+.. |.....+..+|..+...|..+.|++
T Consensus 50 ~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~ 129 (272)
T 3u4t_A 50 LAKYDLAQKDIETYFSKVNATKAKSADFEYYGKILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLAIQ 129 (272)
T ss_dssp TTCHHHHHHHHHHHHTTSCTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHH
T ss_pred HhhHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHHHH
Confidence 4678899999987754 567888899999999888877765 3345788899999999999999999
Q ss_pred HHHhcC
Q psy11102 67 VFDKNK 72 (87)
Q Consensus 67 aylk~g 72 (87)
.|.++=
T Consensus 130 ~~~~al 135 (272)
T 3u4t_A 130 YMEKQI 135 (272)
T ss_dssp HHGGGC
T ss_pred HHHHHh
Confidence 988764
No 60
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=96.10 E-value=0.043 Score=36.60 Aligned_cols=69 Identities=9% Similarity=-0.040 Sum_probs=51.8
Q ss_pred chhHHHHHHHHHHhcc--------HHHHHHHHHHhCCHHHHHHHHhh----CCCCCchHHHHHHHHHhCCChHHHHHHHH
Q psy11102 2 TTLVSQAREYYEKCHC--------YEKLISVYTELGDFEALESCARK----LPDSSPLLKPMGEIFVKYGLCEQAVYVFD 69 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n--------~~k~ie~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~~F~~~G~~~~Av~ayl 69 (87)
.++|++|..+|.++-. +..++.++...|+|+.-.+..+. -|++...+..+|..+...|..+.|++.|.
T Consensus 34 ~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~ 113 (327)
T 3cv0_A 34 LANLAEAALAFEAVCQAAPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNEHNANAALASLR 113 (327)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCcCCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 4678888888887632 34567888899999875555444 35556778899999999999999988765
Q ss_pred h
Q psy11102 70 K 70 (87)
Q Consensus 70 k 70 (87)
+
T Consensus 114 ~ 114 (327)
T 3cv0_A 114 A 114 (327)
T ss_dssp H
T ss_pred H
Confidence 5
No 61
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=96.04 E-value=0.021 Score=36.70 Aligned_cols=48 Identities=15% Similarity=0.165 Sum_probs=21.2
Q ss_pred HHHHHHHhCCHHHHHHHHhh----CCCCCchHHHHHHHHHhCCChHHHHHHH
Q psy11102 21 LISVYTELGDFEALESCARK----LPDSSPLLKPMGEIFVKYGLCEQAVYVF 68 (87)
Q Consensus 21 ~ie~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~~F~~~G~~~~Av~ay 68 (87)
++.++...|++++-....+. -|++...+..+|..+...|..+.|+..|
T Consensus 131 ~a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~ 182 (243)
T 2q7f_A 131 LGTVLVKLEQPKLALPYLQRAVELNENDTEARFQFGMCLANEGMLDEALSQF 182 (243)
T ss_dssp HHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCHHHHHHH
T ss_pred HHHHHHHhccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 34444555555443333222 2333344445555555555555544443
No 62
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=96.04 E-value=0.032 Score=41.01 Aligned_cols=70 Identities=13% Similarity=0.130 Sum_probs=56.7
Q ss_pred chhHHHHHHHHHHhc-------cHHHHHHHHHHhCCHHHHHHHHhh-CCCC-------------------CchHHHHHHH
Q psy11102 2 TTLVSQAREYYEKCH-------CYEKLISVYTELGDFEALESCARK-LPDS-------------------SPLLKPMGEI 54 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~-------n~~k~ie~~~~~ed~d~L~~l~~~-L~~~-------------------~~lL~~ia~~ 54 (87)
.+++++|..+|.+.- -...++.+|++.|++++-.++.+. .|.. ......+|..
T Consensus 130 ~g~~~~A~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 209 (597)
T 2xpi_A 130 TGDYARAKCLLTKEDLYNRSSACRYLAAFCLVKLYDWQGALNLLGETNPFRKDEKNANKLLMQDGGIKLEASMCYLRGQV 209 (597)
T ss_dssp TTCHHHHHHHHHHTCGGGTCHHHHHHHHHHHHHTTCHHHHHHHHCSSCTTC----------CCCSSCCHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHhccccchhHHHHHHHHHHHHhhHHHHHHHHhccCCccccccccccccccccccchhHHHHHHHHHH
Confidence 467888888888872 245678999999999999999984 4554 3567889999
Q ss_pred HHhCCChHHHHHHHHhc
Q psy11102 55 FVKYGLCEQAVYVFDKN 71 (87)
Q Consensus 55 F~~~G~~~~Av~aylk~ 71 (87)
+...|..++|++.|.++
T Consensus 210 ~~~~g~~~~A~~~~~~~ 226 (597)
T 2xpi_A 210 YTNLSNFDRAKECYKEA 226 (597)
T ss_dssp HHHTTCHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHH
Confidence 99999999999999775
No 63
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=96.03 E-value=0.037 Score=36.95 Aligned_cols=69 Identities=13% Similarity=0.246 Sum_probs=43.7
Q ss_pred chhHHHHHHHHHHhc--------cHHHHHHHHHHhCCHHHHHHHHhh----CCCCCchHHHHHHHHHhCCChHHHHHHHH
Q psy11102 2 TTLVSQAREYYEKCH--------CYEKLISVYTELGDFEALESCARK----LPDSSPLLKPMGEIFVKYGLCEQAVYVFD 69 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~--------n~~k~ie~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~~F~~~G~~~~Av~ayl 69 (87)
.++|++|.++|.++- -+..++.++...|++++-.+..+. -|++...+..+|..+...|..++|++.|.
T Consensus 151 ~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~ 230 (327)
T 3cv0_A 151 PNEYRECRTLLHAALEMNPNDAQLHASLGVLYNLSNNYDSAAANLRRAVELRPDDAQLWNKLGATLANGNRPQEALDAYN 230 (327)
T ss_dssp HHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 356777777777642 234566677777777765555443 24444667777777777777777776554
Q ss_pred h
Q psy11102 70 K 70 (87)
Q Consensus 70 k 70 (87)
+
T Consensus 231 ~ 231 (327)
T 3cv0_A 231 R 231 (327)
T ss_dssp H
T ss_pred H
Confidence 4
No 64
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=95.92 E-value=0.031 Score=41.55 Aligned_cols=70 Identities=23% Similarity=0.178 Sum_probs=55.4
Q ss_pred chhHHHHHHHHHHhcc-----------------------HHHHHHHHHHhCCHHHHHHHHhh----CCCCCchHHHHHHH
Q psy11102 2 TTLVSQAREYYEKCHC-----------------------YEKLISVYTELGDFEALESCARK----LPDSSPLLKPMGEI 54 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n-----------------------~~k~ie~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~~ 54 (87)
.++|++|+.+|.++=. +-.+..||+++++|+.-....+. -|.+...+-.+|..
T Consensus 281 ~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a 360 (457)
T 1kt0_A 281 GGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEA 360 (457)
T ss_dssp TTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHH
Confidence 4678899999887633 23678899999999886665554 25566889999999
Q ss_pred HHhCCChHHHHHHHHhc
Q psy11102 55 FVKYGLCEQAVYVFDKN 71 (87)
Q Consensus 55 F~~~G~~~~Av~aylk~ 71 (87)
+...|..++|+..|.++
T Consensus 361 ~~~~g~~~~A~~~~~~a 377 (457)
T 1kt0_A 361 QLLMNEFESAKGDFEKV 377 (457)
T ss_dssp HHHTTCHHHHHHHHHHH
T ss_pred HHHccCHHHHHHHHHHH
Confidence 99999999999998875
No 65
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=95.91 E-value=0.02 Score=40.96 Aligned_cols=72 Identities=14% Similarity=0.152 Sum_probs=57.1
Q ss_pred chhHHHHHHHHHHhcc-------------------------HHHHHHHHHHhCCHHHHHHHHhhC----CCCCchHHHHH
Q psy11102 2 TTLVSQAREYYEKCHC-------------------------YEKLISVYTELGDFEALESCARKL----PDSSPLLKPMG 52 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n-------------------------~~k~ie~~~~~ed~d~L~~l~~~L----~~~~~lL~~ia 52 (87)
.++|++|..+|.++=. +-.+..||..+++|+.-....+.. |.+...+-.+|
T Consensus 192 ~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg 271 (338)
T 2if4_A 192 EEKLEEAMQQYEMAIAYMGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLTEEEKNPKALFRRG 271 (338)
T ss_dssp SSCCHHHHHHHHHHHHHSCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHhccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 4678888888888532 345778899999998766665543 55668899999
Q ss_pred HHHHhCCChHHHHHHHHhcCC
Q psy11102 53 EIFVKYGLCEQAVYVFDKNKH 73 (87)
Q Consensus 53 ~~F~~~G~~~~Av~aylk~gd 73 (87)
..+...|..+.|+..|.++=.
T Consensus 272 ~a~~~~g~~~~A~~~l~~al~ 292 (338)
T 2if4_A 272 KAKAELGQMDSARDDFRKAQK 292 (338)
T ss_dssp HHHHTTTCHHHHHHHHHHTTC
T ss_pred HHHHHcCCHHHHHHHHHHHHH
Confidence 999999999999999998743
No 66
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=95.90 E-value=0.037 Score=38.26 Aligned_cols=69 Identities=10% Similarity=0.047 Sum_probs=50.8
Q ss_pred chhHHHHHHHHHHhcc--------HHHHHHHHHHhCCHHHHHHHHhhC----CCCCchHHHHHHHHHhCCChHHHHHHHH
Q psy11102 2 TTLVSQAREYYEKCHC--------YEKLISVYTELGDFEALESCARKL----PDSSPLLKPMGEIFVKYGLCEQAVYVFD 69 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n--------~~k~ie~~~~~ed~d~L~~l~~~L----~~~~~lL~~ia~~F~~~G~~~~Av~ayl 69 (87)
.+++++|.++|.++-. +..+..+|...|+|+.-.+..+.. |.+...+..+|..+...|..++|++.|.
T Consensus 78 ~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~ 157 (365)
T 4eqf_A 78 EGDLPVTILFMEAAILQDPGDAEAWQFLGITQAENENEQAAIVALQRCLELQPNNLKALMALAVSYTNTSHQQDACEALK 157 (365)
T ss_dssp HTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHccccHHHHHHHHH
Confidence 3677888888877632 345677888888888766555542 4456778889999999999999988775
Q ss_pred h
Q psy11102 70 K 70 (87)
Q Consensus 70 k 70 (87)
+
T Consensus 158 ~ 158 (365)
T 4eqf_A 158 N 158 (365)
T ss_dssp H
T ss_pred H
Confidence 5
No 67
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=95.84 E-value=0.052 Score=39.11 Aligned_cols=69 Identities=20% Similarity=0.312 Sum_probs=46.8
Q ss_pred chhHHHHHHHHHHhcc--------HHHHHHHHHHhCCHHHHHHHHhh----CCCCCchHHHHHHHHHhCCChHHHHHHHH
Q psy11102 2 TTLVSQAREYYEKCHC--------YEKLISVYTELGDFEALESCARK----LPDSSPLLKPMGEIFVKYGLCEQAVYVFD 69 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n--------~~k~ie~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~~F~~~G~~~~Av~ayl 69 (87)
.++|++|.++|.++-. +..+..+++..|+++.-.+..+. -|.+...+..+|..+...|..++|++.|.
T Consensus 323 ~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~ 402 (537)
T 3fp2_A 323 LQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQGKFTESEAFFNETKLKFPTLPEVPTFFAEILTDRGDFDTAIKQYD 402 (537)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 3567777777776532 23566777788887765555544 24455677778888888888888887776
Q ss_pred h
Q psy11102 70 K 70 (87)
Q Consensus 70 k 70 (87)
+
T Consensus 403 ~ 403 (537)
T 3fp2_A 403 I 403 (537)
T ss_dssp H
T ss_pred H
Confidence 5
No 68
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=95.78 E-value=0.031 Score=42.01 Aligned_cols=70 Identities=10% Similarity=0.014 Sum_probs=56.4
Q ss_pred chhHHHHHHHHHHhcc--------HHHHHHHHHHhCCHHHHHHHHhhC----CCCCchHHHHHHHHHhCCChHHHHHHHH
Q psy11102 2 TTLVSQAREYYEKCHC--------YEKLISVYTELGDFEALESCARKL----PDSSPLLKPMGEIFVKYGLCEQAVYVFD 69 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n--------~~k~ie~~~~~ed~d~L~~l~~~L----~~~~~lL~~ia~~F~~~G~~~~Av~ayl 69 (87)
.++|++|.++|.++=. +..+..+|...|+|++-.+..+.. |++...+..+|..+...|..++|++.|.
T Consensus 19 ~g~~~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~ 98 (477)
T 1wao_1 19 AKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYE 98 (477)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 5789999999998633 356788999999999876665542 4455788899999999999999999987
Q ss_pred hc
Q psy11102 70 KN 71 (87)
Q Consensus 70 k~ 71 (87)
++
T Consensus 99 ~a 100 (477)
T 1wao_1 99 TV 100 (477)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 69
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=95.78 E-value=0.054 Score=37.39 Aligned_cols=69 Identities=16% Similarity=0.280 Sum_probs=47.0
Q ss_pred chhHHHHHHHHHHhcc----------HHHHHHHHHHhCCHHHHHHHHhh----CCCCCchHHHHHHHHHhCCChHHHHHH
Q psy11102 2 TTLVSQAREYYEKCHC----------YEKLISVYTELGDFEALESCARK----LPDSSPLLKPMGEIFVKYGLCEQAVYV 67 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n----------~~k~ie~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~~F~~~G~~~~Av~a 67 (87)
.+++++|.++|.++-. +..+..+|...|++++-.+..+. -|++...+..+|..+...|..++|++.
T Consensus 190 ~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~ 269 (365)
T 4eqf_A 190 SSVLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPEDYSLWNRLGATLANGDRSEEAVEA 269 (365)
T ss_dssp CHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHhCcCccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHH
Confidence 4677777777776532 34566777778887776555444 244556777888888888888888776
Q ss_pred HHh
Q psy11102 68 FDK 70 (87)
Q Consensus 68 ylk 70 (87)
|.+
T Consensus 270 ~~~ 272 (365)
T 4eqf_A 270 YTR 272 (365)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 70
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=95.77 E-value=0.074 Score=34.54 Aligned_cols=70 Identities=11% Similarity=-0.031 Sum_probs=52.9
Q ss_pred chhHHHHHHHHHHhcc--------HHHHHHHHHHhCCHHHHHHHHhh----CCCCCchHHHHHHHHHhCCChHHHHHHHH
Q psy11102 2 TTLVSQAREYYEKCHC--------YEKLISVYTELGDFEALESCARK----LPDSSPLLKPMGEIFVKYGLCEQAVYVFD 69 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n--------~~k~ie~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~~F~~~G~~~~Av~ayl 69 (87)
.+++++|.++|.++-. +..++.+++..|+++.-....+. -|.....+..++..+...|..++|.+.|.
T Consensus 154 ~g~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~ 233 (252)
T 2ho1_A 154 MKKPAQAKEYFEKSLRLNRNQPSVALEMADLLYKEREYVPARQYYDLFAQGGGQNARSLLLGIRLAKVFEDRDTAASYGL 233 (252)
T ss_dssp TTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHccCHHHHHHHHH
Confidence 4678899999987532 55788889999999886655554 34445667888888889999999988876
Q ss_pred hc
Q psy11102 70 KN 71 (87)
Q Consensus 70 k~ 71 (87)
++
T Consensus 234 ~~ 235 (252)
T 2ho1_A 234 QL 235 (252)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 71
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=95.76 E-value=0.071 Score=31.52 Aligned_cols=57 Identities=14% Similarity=0.151 Sum_probs=40.7
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHhCCHHHHHHHHhhCCCCCchHHHHHHHHHhCCChHHHHHHHHh
Q psy11102 5 VSQAREYYEKCHCYEKLISVYTELGDFEALESCARKLPDSSPLLKPMGEIFVKYGLCEQAVYVFDK 70 (87)
Q Consensus 5 w~~A~~yY~~~~n~~k~ie~~~~~ed~d~L~~l~~~L~~~~~lL~~ia~~F~~~G~~~~Av~aylk 70 (87)
|..-...|.+.|++++++++|-+ .++.-|++...+..+|..+...|..++|++.|.+
T Consensus 7 ~~~~g~~~~~~~~~~~A~~~~~~---------al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~ 63 (126)
T 3upv_A 7 ARLEGKEYFTKSDWPNAVKAYTE---------MIKRAPEDARGYSNRAAALAKLMSFPEAIADCNK 63 (126)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHH---------HHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHH---------HHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 44445556666777777766533 3334466778899999999999999999987654
No 72
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=95.71 E-value=0.064 Score=34.37 Aligned_cols=69 Identities=16% Similarity=0.178 Sum_probs=44.0
Q ss_pred chhHHHHHHHHHHhccH--------HHHHHHHHHhCCHHHHHHHHhh----CCCCCchHHHHHHHHHhCCChHHHHHHHH
Q psy11102 2 TTLVSQAREYYEKCHCY--------EKLISVYTELGDFEALESCARK----LPDSSPLLKPMGEIFVKYGLCEQAVYVFD 69 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n~--------~k~ie~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~~F~~~G~~~~Av~ayl 69 (87)
.+++++|..+|.++-.. ..++.++...|+++.-.+..+. -|.+...+..+|..+...|..++|++.|.
T Consensus 70 ~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~ 149 (243)
T 2q7f_A 70 VNELERALAFYDKALELDSSAATAYYGAGNVYVVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVKLEQPKLALPYLQ 149 (243)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 35667777777665322 3456677777777765555443 24445667777777777887777777665
Q ss_pred h
Q psy11102 70 K 70 (87)
Q Consensus 70 k 70 (87)
+
T Consensus 150 ~ 150 (243)
T 2q7f_A 150 R 150 (243)
T ss_dssp H
T ss_pred H
Confidence 4
No 73
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=95.70 E-value=0.07 Score=36.72 Aligned_cols=62 Identities=11% Similarity=0.101 Sum_probs=39.0
Q ss_pred hHHHHHHHHHHhccHHHHHHHHHHhCCHHHH-------HHHHhhCCCC---CchHHHHHHHHHhCCChHHHHHHHHhc
Q psy11102 4 LVSQAREYYEKCHCYEKLISVYTELGDFEAL-------ESCARKLPDS---SPLLKPMGEIFVKYGLCEQAVYVFDKN 71 (87)
Q Consensus 4 ~w~~A~~yY~~~~n~~k~ie~~~~~ed~d~L-------~~l~~~L~~~---~~lL~~ia~~F~~~G~~~~Av~aylk~ 71 (87)
+|++|+++|.++++ +|...|+|++- .++.+.+.+. ...+..+|..+...|..++|++.|.++
T Consensus 32 ~~~~A~~~~~~a~~------~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g~~~~A~~~~~~A 103 (292)
T 1qqe_A 32 KFEEAADLCVQAAT------IYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENA 103 (292)
T ss_dssp HHHHHHHHHHHHHH------HHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHH------HHHHcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 48888888777643 34444544432 2333333331 356788899999999998888776543
No 74
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=95.70 E-value=0.099 Score=30.40 Aligned_cols=54 Identities=11% Similarity=0.225 Sum_probs=37.3
Q ss_pred HHHHHHhccHHHHHHHHHHhCCHHHHHHHHhhCCCCCchHHHHHHHHHhCCChHHHHHHHHhc
Q psy11102 9 REYYEKCHCYEKLISVYTELGDFEALESCARKLPDSSPLLKPMGEIFVKYGLCEQAVYVFDKN 71 (87)
Q Consensus 9 ~~yY~~~~n~~k~ie~~~~~ed~d~L~~l~~~L~~~~~lL~~ia~~F~~~G~~~~Av~aylk~ 71 (87)
+..|.+.|+++++++++ ++.++.-|+.......+|..+...|..++|++.|.++
T Consensus 14 g~~~~~~g~~~~A~~~~---------~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~a 67 (100)
T 3ma5_A 14 AQEHLKHDNASRALALF---------EELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQG 67 (100)
T ss_dssp HHHHHHTTCHHHHHHHH---------HHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHH---------HHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 33444455555555543 2333334666788899999999999999999999764
No 75
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=95.70 E-value=0.05 Score=38.36 Aligned_cols=70 Identities=19% Similarity=0.181 Sum_probs=52.9
Q ss_pred chhHHHHHHHHHHhcc--------HHHHHHHHHHhCCHHHHHHHHhh----CCCCCchHHHHHHHHHhCCChHHHHHHHH
Q psy11102 2 TTLVSQAREYYEKCHC--------YEKLISVYTELGDFEALESCARK----LPDSSPLLKPMGEIFVKYGLCEQAVYVFD 69 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n--------~~k~ie~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~~F~~~G~~~~Av~ayl 69 (87)
.++|++|..+|.++-. +-.++.+|+..|+++.-....+. -|+....+..+|..+...|..++|++.|.
T Consensus 39 ~g~~~~A~~~~~~~l~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~ 118 (450)
T 2y4t_A 39 AGQLADALSQFHAAVDGDPDNYIAYYRRATVFLAMGKSKAALPDLTKVIQLKMDFTAARLQRGHLLLKQGKLDEAEDDFK 118 (450)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 4678888888887532 34677888999999886665554 35556778889999999999999987665
Q ss_pred hc
Q psy11102 70 KN 71 (87)
Q Consensus 70 k~ 71 (87)
++
T Consensus 119 ~~ 120 (450)
T 2y4t_A 119 KV 120 (450)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 76
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=95.69 E-value=0.056 Score=36.98 Aligned_cols=68 Identities=16% Similarity=0.298 Sum_probs=44.1
Q ss_pred hhHHHHHHHHHHhc----------cHHHHHHHHHHhCCHHHHHHHHhh----CCCCCchHHHHHHHHHhCCChHHHHHHH
Q psy11102 3 TLVSQAREYYEKCH----------CYEKLISVYTELGDFEALESCARK----LPDSSPLLKPMGEIFVKYGLCEQAVYVF 68 (87)
Q Consensus 3 ~~w~~A~~yY~~~~----------n~~k~ie~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~~F~~~G~~~~Av~ay 68 (87)
+++++|.++|.++- -+..+..+|...|+|++-....+. -|++...+..+|..+...|..++|++.|
T Consensus 195 ~~~~~A~~~~~~a~~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~ 274 (368)
T 1fch_A 195 SLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVRPNDYLLWNKLGATLANGNQSEEAVAAY 274 (368)
T ss_dssp HHHHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 56777777776642 234556777777777765554443 2444566777787787888877777665
Q ss_pred Hh
Q psy11102 69 DK 70 (87)
Q Consensus 69 lk 70 (87)
.+
T Consensus 275 ~~ 276 (368)
T 1fch_A 275 RR 276 (368)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 77
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=95.68 E-value=0.053 Score=37.59 Aligned_cols=24 Identities=13% Similarity=0.171 Sum_probs=15.0
Q ss_pred chHHHHHHHHHhCCChHHHHHHHH
Q psy11102 46 PLLKPMGEIFVKYGLCEQAVYVFD 69 (87)
Q Consensus 46 ~lL~~ia~~F~~~G~~~~Av~ayl 69 (87)
..+..+|..+...|..++|++.|.
T Consensus 77 ~~~~~lg~~~~~~g~~~~A~~~~~ 100 (307)
T 2ifu_A 77 KAFEQAGMMLKDLQRMPEAVQYIE 100 (307)
T ss_dssp HHHHHHHHHHHHTTCGGGGHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHH
Confidence 456666777777776666655554
No 78
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=95.67 E-value=0.057 Score=36.92 Aligned_cols=69 Identities=19% Similarity=0.142 Sum_probs=46.2
Q ss_pred chhHHHHHHHHHHhcc--------HHHHHHHHHHhCCHHHHHHHHhh----CCCCCchHHHHHHHHHhCCChHHHHHHHH
Q psy11102 2 TTLVSQAREYYEKCHC--------YEKLISVYTELGDFEALESCARK----LPDSSPLLKPMGEIFVKYGLCEQAVYVFD 69 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n--------~~k~ie~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~~F~~~G~~~~Av~ayl 69 (87)
.++|++|..+|.++-. +..+..++...|+++.-.+..+. -|++...+..+|..+...|..++|++.|.
T Consensus 77 ~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~ 156 (368)
T 1fch_A 77 EGDLPNAVLLFEAAVQQDPKHMEAWQYLGTTQAENEQELLAISALRRCLELKPDNQTALMALAVSFTNESLQRQACEILR 156 (368)
T ss_dssp TTCHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 3567777777776532 34566777778887765554443 24455677788888888888888877776
Q ss_pred h
Q psy11102 70 K 70 (87)
Q Consensus 70 k 70 (87)
+
T Consensus 157 ~ 157 (368)
T 1fch_A 157 D 157 (368)
T ss_dssp H
T ss_pred H
Confidence 4
No 79
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=95.66 E-value=0.078 Score=30.08 Aligned_cols=54 Identities=15% Similarity=0.170 Sum_probs=34.6
Q ss_pred HHHHHHhccHHHHHHHHHHhCCHHHHHHHHhhCCCCCchHHHHHHHHHhCCChHHHHHHHHhc
Q psy11102 9 REYYEKCHCYEKLISVYTELGDFEALESCARKLPDSSPLLKPMGEIFVKYGLCEQAVYVFDKN 71 (87)
Q Consensus 9 ~~yY~~~~n~~k~ie~~~~~ed~d~L~~l~~~L~~~~~lL~~ia~~F~~~G~~~~Av~aylk~ 71 (87)
...|.+.|++++++++|- +.++.-|.+...+..+|..+...|..++|++.|.++
T Consensus 11 g~~~~~~~~~~~A~~~~~---------~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~a 64 (111)
T 2l6j_A 11 GNSLFKQGLYREAVHCYD---------QLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQG 64 (111)
T ss_dssp HHHHHTTTCHHHHHHHHH---------HHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHH---------HHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 334444455555555432 223334556677888888888888888888888764
No 80
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=95.66 E-value=0.06 Score=37.95 Aligned_cols=70 Identities=14% Similarity=0.221 Sum_probs=54.6
Q ss_pred chhHHHHHHHHHHhc------------cHHHHHHHHHHhCCHHHHHHHHhhC----CCCCchHHHHHHHHHhCCChHHHH
Q psy11102 2 TTLVSQAREYYEKCH------------CYEKLISVYTELGDFEALESCARKL----PDSSPLLKPMGEIFVKYGLCEQAV 65 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~------------n~~k~ie~~~~~ed~d~L~~l~~~L----~~~~~lL~~ia~~F~~~G~~~~Av 65 (87)
.++|++|.++|.++- -+..++.++...|++++-.+..+.. |++...+..+|..+...|..++|+
T Consensus 270 ~g~~~~A~~~~~~~l~~~p~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~~~~~~A~ 349 (450)
T 2y4t_A 270 DGRYTDATSKYESVMKTEPSIAEYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPDNVNALKDRAEAYLIEEMYDEAI 349 (450)
T ss_dssp HTCHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHH
T ss_pred cCCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhcCHHHHH
Confidence 367888888888762 2345678888999998877766653 445678889999999999999999
Q ss_pred HHHHhc
Q psy11102 66 YVFDKN 71 (87)
Q Consensus 66 ~aylk~ 71 (87)
+.|.++
T Consensus 350 ~~~~~a 355 (450)
T 2y4t_A 350 QDYETA 355 (450)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998775
No 81
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=95.65 E-value=0.058 Score=36.26 Aligned_cols=48 Identities=19% Similarity=0.103 Sum_probs=27.8
Q ss_pred HHHHHHhCCHHHHHHHHhhC----CCCCchHHHHHHHHHhCCChHHHHHHHH
Q psy11102 22 ISVYTELGDFEALESCARKL----PDSSPLLKPMGEIFVKYGLCEQAVYVFD 69 (87)
Q Consensus 22 ie~~~~~ed~d~L~~l~~~L----~~~~~lL~~ia~~F~~~G~~~~Av~ayl 69 (87)
+.++...|++++-.++.+.+ |.+...+..+|..+...|..++|++.|.
T Consensus 127 a~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~ 178 (359)
T 3ieg_A 127 ALDAFDGADYTAAITFLDKILEVCVWDAELRELRAECFIKEGEPRKAISDLK 178 (359)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHccCHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 35566666666555444442 3344556666666666676666665543
No 82
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=95.64 E-value=0.018 Score=35.04 Aligned_cols=50 Identities=8% Similarity=-0.102 Sum_probs=24.5
Q ss_pred HHHHHHHhCCHHHHHHHHhh----CCCCCchHHHHHHHHHhCCChHHHHHHHHh
Q psy11102 21 LISVYTELGDFEALESCARK----LPDSSPLLKPMGEIFVKYGLCEQAVYVFDK 70 (87)
Q Consensus 21 ~ie~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~~F~~~G~~~~Av~aylk 70 (87)
+..++...|+++.-....+. -|++...+..+|..+...|..++|+..|.+
T Consensus 57 lg~~~~~~g~~~~A~~~~~~al~l~P~~~~~~~~la~~~~~~g~~~~A~~~~~~ 110 (121)
T 1hxi_A 57 LGLTQAENEKDGLAIIALNHARMLDPKDIAVHAALAVSHTNEHNANAALASLRA 110 (121)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 44455555555433322222 233444555555555555555555555543
No 83
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=95.64 E-value=0.073 Score=33.47 Aligned_cols=50 Identities=20% Similarity=0.237 Sum_probs=24.1
Q ss_pred HHHHHHHhCCHHHHHHHHhh----CCCCCchHHHHHHHHHhC-CChHHHHHHHHh
Q psy11102 21 LISVYTELGDFEALESCARK----LPDSSPLLKPMGEIFVKY-GLCEQAVYVFDK 70 (87)
Q Consensus 21 ~ie~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~~F~~~-G~~~~Av~aylk 70 (87)
++.++...|+++.-.+..+. -|.+...+..+|..+... |..++|++.|.+
T Consensus 48 l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~ 102 (225)
T 2vq2_A 48 RAEIYQYLKVNDKAQESFRQALSIKPDSAEINNNYGWFLCGRLNRPAESMAYFDK 102 (225)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred HHHHHHHcCChHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 34455555555544333332 233334455555555555 555555554433
No 84
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=95.61 E-value=0.08 Score=32.35 Aligned_cols=50 Identities=20% Similarity=0.232 Sum_probs=35.7
Q ss_pred HHHhccHHHHHHHHHHhCCHHHHHHHHhhCCCCCchHHHHHHHHHhCCChHHHHHHHHh
Q psy11102 12 YEKCHCYEKLISVYTELGDFEALESCARKLPDSSPLLKPMGEIFVKYGLCEQAVYVFDK 70 (87)
Q Consensus 12 Y~~~~n~~k~ie~~~~~ed~d~L~~l~~~L~~~~~lL~~ia~~F~~~G~~~~Av~aylk 70 (87)
|.+.|++++|+++|-+ .+..-|.+...+..+|..+...|..++|++.|.+
T Consensus 23 ~~~~g~~~~A~~~~~~---------al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 72 (126)
T 4gco_A 23 YFKKGDYPTAMRHYNE---------AVKRDPENAILYSNRAACLTKLMEFQRALDDCDT 72 (126)
T ss_dssp HHHTTCHHHHHHHHHH---------HHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHH---------HHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHH
Confidence 4445666666666533 2333466678899999999999999999987654
No 85
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=95.44 E-value=0.052 Score=37.90 Aligned_cols=66 Identities=24% Similarity=0.397 Sum_probs=34.7
Q ss_pred hhHHHHHHHHHHh--------ccHHHHHHHHHHhCCHHHHHHHHhh----CCCCCchHHHHHHHHHhCCChHHHHHHH
Q psy11102 3 TLVSQAREYYEKC--------HCYEKLISVYTELGDFEALESCARK----LPDSSPLLKPMGEIFVKYGLCEQAVYVF 68 (87)
Q Consensus 3 ~~w~~A~~yY~~~--------~n~~k~ie~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~~F~~~G~~~~Av~ay 68 (87)
++|++|.++|.++ .-+..++.++...|++++-.+..+. -|++...+..+|..+...|..++|++.|
T Consensus 251 g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~ 328 (388)
T 1w3b_A 251 GLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTHADSLNNLANIKREQGNIEEAVRLY 328 (388)
T ss_dssp TCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 4556666665542 1233455555666665554443333 2334455556666666666666665544
No 86
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=95.44 E-value=0.14 Score=28.01 Aligned_cols=31 Identities=19% Similarity=0.372 Sum_probs=25.9
Q ss_pred CCCCCchHHHHHHHHHhCCChHHHHHHHHhc
Q psy11102 41 LPDSSPLLKPMGEIFVKYGLCEQAVYVFDKN 71 (87)
Q Consensus 41 L~~~~~lL~~ia~~F~~~G~~~~Av~aylk~ 71 (87)
-|.+...+..+|..+...|..++|+..|.++
T Consensus 39 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a 69 (91)
T 1na3_A 39 DPNNAEAWYNLGNAYYKQGDYDEAIEYYQKA 69 (91)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 3556677889999999999999999988764
No 87
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=95.35 E-value=0.025 Score=37.35 Aligned_cols=69 Identities=19% Similarity=0.145 Sum_probs=49.3
Q ss_pred chhHHHHHHHHHHhcc--------HHHHHHHHHHhCCHHHHHHHHhh----CCCCCchHHHHHHHHHhC-----------
Q psy11102 2 TTLVSQAREYYEKCHC--------YEKLISVYTELGDFEALESCARK----LPDSSPLLKPMGEIFVKY----------- 58 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n--------~~k~ie~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~~F~~~----------- 58 (87)
.+++++|+.+|.++=. +-.+..++...|++++-....+. -|++......+|..+...
T Consensus 18 ~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~~~~~~~~~~ 97 (217)
T 2pl2_A 18 LGRYDAALTLFERALKENPQDPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAYVALYRQAEDRERGK 97 (217)
T ss_dssp TTCHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHTCSSHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHhhhhhhhhcccc
Confidence 4677888888877532 34567788888888876555444 355667788888888888
Q ss_pred CChHHHHHHHHh
Q psy11102 59 GLCEQAVYVFDK 70 (87)
Q Consensus 59 G~~~~Av~aylk 70 (87)
|..++|++.|.+
T Consensus 98 g~~~~A~~~~~~ 109 (217)
T 2pl2_A 98 GYLEQALSVLKD 109 (217)
T ss_dssp HHHHHHHHHHHH
T ss_pred cCHHHHHHHHHH
Confidence 888888876544
No 88
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=95.35 E-value=0.15 Score=34.94 Aligned_cols=70 Identities=11% Similarity=0.027 Sum_probs=50.3
Q ss_pred hhHHHHHHHHHHhcc--------------HHHHHHHHHHhCCHHHHHHHHhh----CCCCC-c------hHHHHHHHHHh
Q psy11102 3 TLVSQAREYYEKCHC--------------YEKLISVYTELGDFEALESCARK----LPDSS-P------LLKPMGEIFVK 57 (87)
Q Consensus 3 ~~w~~A~~yY~~~~n--------------~~k~ie~~~~~ed~d~L~~l~~~----L~~~~-~------lL~~ia~~F~~ 57 (87)
+++++|+++|.++-. +..+..++...|+|++-....+. -|++. . .+..+|..+..
T Consensus 132 g~~~~A~~~~~~Al~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~ 211 (292)
T 1qqe_A 132 HDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLA 211 (292)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHH
Confidence 678888888877643 33557788888999876555444 34432 1 46778888999
Q ss_pred CCChHHHHHHHHhcC
Q psy11102 58 YGLCEQAVYVFDKNK 72 (87)
Q Consensus 58 ~G~~~~Av~aylk~g 72 (87)
.|..++|+.+|.++-
T Consensus 212 ~g~~~~A~~~~~~al 226 (292)
T 1qqe_A 212 ATDAVAAARTLQEGQ 226 (292)
T ss_dssp TTCHHHHHHHHHGGG
T ss_pred cCCHHHHHHHHHHHH
Confidence 999999999988763
No 89
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=95.34 E-value=0.049 Score=38.05 Aligned_cols=67 Identities=21% Similarity=0.246 Sum_probs=37.1
Q ss_pred hhHHHHHHHHHHhcc--------HHHHHHHHHHhCCHHHHHHHHhh----CCCCCchHHHHHHHHHhCCChHHHHHHHH
Q psy11102 3 TLVSQAREYYEKCHC--------YEKLISVYTELGDFEALESCARK----LPDSSPLLKPMGEIFVKYGLCEQAVYVFD 69 (87)
Q Consensus 3 ~~w~~A~~yY~~~~n--------~~k~ie~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~~F~~~G~~~~Av~ayl 69 (87)
+++++|.++|.++-. +..++.++...|++++-.+..+. -|+.......+|..+...|..++|++.|.
T Consensus 81 g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~ 159 (388)
T 1w3b_A 81 GQLQEAIEHYRHALRLKPDFIDGYINLAAALVAAGDMEGAVQAYVSALQYNPDLYCVRSDLGNLLKALGRLEEAKACYL 159 (388)
T ss_dssp TCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHSCSSHHHHHHHHHHHHCTTCTHHHHHHHHHHHTTSCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHH
Confidence 456666666655421 23455556666665544333322 24445556667777777777777666553
No 90
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=95.16 E-value=0.053 Score=43.46 Aligned_cols=69 Identities=16% Similarity=0.204 Sum_probs=46.2
Q ss_pred chhHHHHHHHHHHhcc--------HHHHHHHHHHhCCHHHHHHHHhh----CCCCCchHHHHHHHHHhCCChHHHHHHHH
Q psy11102 2 TTLVSQAREYYEKCHC--------YEKLISVYTELGDFEALESCARK----LPDSSPLLKPMGEIFVKYGLCEQAVYVFD 69 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n--------~~k~ie~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~~F~~~G~~~~Av~ayl 69 (87)
.|++++|+++|.++=. +-.+..+|...|++++-.+..+. =|+....+..+|..+...|..++|+++|.
T Consensus 22 ~G~~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~~~g~~~~A~~~~~ 101 (723)
T 4gyw_A 22 QGNIEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYT 101 (723)
T ss_dssp TTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 3677788888877532 23566777778887765544433 24445677788888888888888877664
Q ss_pred h
Q psy11102 70 K 70 (87)
Q Consensus 70 k 70 (87)
|
T Consensus 102 k 102 (723)
T 4gyw_A 102 R 102 (723)
T ss_dssp H
T ss_pred H
Confidence 4
No 91
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=95.07 E-value=0.095 Score=39.23 Aligned_cols=68 Identities=10% Similarity=0.069 Sum_probs=36.7
Q ss_pred hhHHHHHHHHHHhcc--------HHHHHHHHHHhCCHHHHHHHHhh----CCCCCchHHHHHHHHHhCCChHHHHHHHHh
Q psy11102 3 TLVSQAREYYEKCHC--------YEKLISVYTELGDFEALESCARK----LPDSSPLLKPMGEIFVKYGLCEQAVYVFDK 70 (87)
Q Consensus 3 ~~w~~A~~yY~~~~n--------~~k~ie~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~~F~~~G~~~~Av~aylk 70 (87)
++|++|.++|.++-. +..+..+|...|++++-.+..+. -|++...+..+|..+...|..++|++.|.+
T Consensus 37 g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~ 116 (568)
T 2vsy_A 37 GDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVLLQQASDAAPEHPGIALWLGHALEDAGQAEAAAAAYTR 116 (568)
T ss_dssp TCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 455666666655422 23445556666666554443333 233345566666666666666666655544
No 92
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=95.07 E-value=0.045 Score=41.00 Aligned_cols=70 Identities=14% Similarity=0.097 Sum_probs=41.5
Q ss_pred CchhHHHHHHHHHHhcc--------HHHHHHHHHHhCCHHHHHHHHhhC----CCCCchHHHHHHHHHhCCChHHHHHHH
Q psy11102 1 MTTLVSQAREYYEKCHC--------YEKLISVYTELGDFEALESCARKL----PDSSPLLKPMGEIFVKYGLCEQAVYVF 68 (87)
Q Consensus 1 ~~~~w~~A~~yY~~~~n--------~~k~ie~~~~~ed~d~L~~l~~~L----~~~~~lL~~ia~~F~~~G~~~~Av~ay 68 (87)
+++++++|.++|.++-. +..+..++...|+|++-.+..+.. |++...+..+|..+...|..++|++.|
T Consensus 1 ~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~ 80 (568)
T 2vsy_A 1 MTADGPRELLQLRAAVRHRPQDFVAWLMLADAELGMGDTTAGEMAVQRGLALHPGHPEAVARLGRVRWTQQRHAEAAVLL 80 (568)
T ss_dssp --------------------CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTSTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCHHHHHHHH
Confidence 56889999999988642 445678889999998877666553 444578899999999999999998766
Q ss_pred Hh
Q psy11102 69 DK 70 (87)
Q Consensus 69 lk 70 (87)
.+
T Consensus 81 ~~ 82 (568)
T 2vsy_A 81 QQ 82 (568)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 93
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=95.03 E-value=0.094 Score=29.28 Aligned_cols=56 Identities=14% Similarity=0.146 Sum_probs=39.4
Q ss_pred HHHHHHHHhccHHHHHHHHHHhCCHHHHHHHHhhCCCCCchHHHHHHHHHhCCChHHHHHHHHhc
Q psy11102 7 QAREYYEKCHCYEKLISVYTELGDFEALESCARKLPDSSPLLKPMGEIFVKYGLCEQAVYVFDKN 71 (87)
Q Consensus 7 ~A~~yY~~~~n~~k~ie~~~~~ed~d~L~~l~~~L~~~~~lL~~ia~~F~~~G~~~~Av~aylk~ 71 (87)
.-+..|.+.|+++++++++- +.+..-|.+...+..+|..+...|..++|++.|.++
T Consensus 11 ~~~~~~~~~~~~~~A~~~~~---------~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a 66 (112)
T 2kck_A 11 LEGVLQYDAGNYTESIDLFE---------KAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYV 66 (112)
T ss_dssp GHHHHHHSSCCHHHHHHHHH---------HHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHHHH---------HHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 34455666667777766653 233334666677889999999999999999888653
No 94
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=94.99 E-value=0.05 Score=36.00 Aligned_cols=70 Identities=13% Similarity=0.146 Sum_probs=50.3
Q ss_pred chhHHHHHHHHHHhcc----------------HHHHHHHHHHhCCHHHHHHHHhhC---------CC---CCchHHHHHH
Q psy11102 2 TTLVSQAREYYEKCHC----------------YEKLISVYTELGDFEALESCARKL---------PD---SSPLLKPMGE 53 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n----------------~~k~ie~~~~~ed~d~L~~l~~~L---------~~---~~~lL~~ia~ 53 (87)
.++|++|..+|.++-. +..+..+|...|+|+.-.+..+.. ++ ....+..+|.
T Consensus 40 ~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~ 119 (311)
T 3nf1_A 40 QGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAV 119 (311)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Confidence 4678888888877654 345677888888888665544432 22 2356788899
Q ss_pred HHHhCCChHHHHHHHHhc
Q psy11102 54 IFVKYGLCEQAVYVFDKN 71 (87)
Q Consensus 54 ~F~~~G~~~~Av~aylk~ 71 (87)
.+...|..++|++.|.++
T Consensus 120 ~~~~~g~~~~A~~~~~~a 137 (311)
T 3nf1_A 120 LYGKRGKYKEAEPLCKRA 137 (311)
T ss_dssp HHHTTTCHHHHHHHHHHH
T ss_pred HHHHcCcHHHHHHHHHHH
Confidence 999999999998888764
No 95
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=94.99 E-value=0.12 Score=29.17 Aligned_cols=53 Identities=15% Similarity=0.146 Sum_probs=35.9
Q ss_pred HHHHHhccHHHHHHHHHHhCCHHHHHHHHhhCCCCCc-hHHHHHHHHHhCCChHHHHHHHHhc
Q psy11102 10 EYYEKCHCYEKLISVYTELGDFEALESCARKLPDSSP-LLKPMGEIFVKYGLCEQAVYVFDKN 71 (87)
Q Consensus 10 ~yY~~~~n~~k~ie~~~~~ed~d~L~~l~~~L~~~~~-lL~~ia~~F~~~G~~~~Av~aylk~ 71 (87)
..|.+.|+++++++++-+ .+..-|++.. .+..+|..+...|..++|++.|.++
T Consensus 8 ~~~~~~~~~~~A~~~~~~---------al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~a 61 (99)
T 2kc7_A 8 KELINQGDIENALQALEE---------FLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSA 61 (99)
T ss_dssp HHHHHHTCHHHHHHHHHH---------HHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHH---------HHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 334455566666665432 2333455556 8888999999999999999988764
No 96
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=94.93 E-value=0.18 Score=30.63 Aligned_cols=50 Identities=14% Similarity=0.137 Sum_probs=36.1
Q ss_pred HHHhccHHHHHHHHHHhCCHHHHHHHHhhCCCCCchHHHHHHHHHhCCChHHHHHHHHh
Q psy11102 12 YEKCHCYEKLISVYTELGDFEALESCARKLPDSSPLLKPMGEIFVKYGLCEQAVYVFDK 70 (87)
Q Consensus 12 Y~~~~n~~k~ie~~~~~ed~d~L~~l~~~L~~~~~lL~~ia~~F~~~G~~~~Av~aylk 70 (87)
|.+.|++++|+++|-+. +.--|++...+..+|..+...|.+++|++.|.+
T Consensus 18 ~~~~~~~~~A~~~y~~A---------l~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~ 67 (127)
T 4gcn_A 18 AYKQKDFEKAHVHYDKA---------IELDPSNITFYNNKAAVYFEEKKFAECVQFCEK 67 (127)
T ss_dssp HHHTTCHHHHHHHHHHH---------HHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHH---------HHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHH
Confidence 45566777777766432 222366678899999999999999999886654
No 97
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=94.90 E-value=0.17 Score=31.40 Aligned_cols=54 Identities=19% Similarity=0.160 Sum_probs=37.0
Q ss_pred HHHHHHHhccHHHHHHHHHHhCCHHHHHHHHhhCCCCCchHHHHHHHHHhCCChHHHHHHHHh
Q psy11102 8 AREYYEKCHCYEKLISVYTELGDFEALESCARKLPDSSPLLKPMGEIFVKYGLCEQAVYVFDK 70 (87)
Q Consensus 8 A~~yY~~~~n~~k~ie~~~~~ed~d~L~~l~~~L~~~~~lL~~ia~~F~~~G~~~~Av~aylk 70 (87)
-...|.+.|++++++++|-+ .++.-|.+...+..+|..+...|.+++|+..|.+
T Consensus 17 ~g~~~~~~g~~~~A~~~~~~---------al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~ 70 (164)
T 3sz7_A 17 EGNAAMARKEYSKAIDLYTQ---------ALSIAPANPIYLSNRAAAYSASGQHEKAAEDAEL 70 (164)
T ss_dssp HHHHHHHTTCHHHHHHHHHH---------HHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHH---------HHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHH
Confidence 33444455566666555533 2333366678899999999999999999987754
No 98
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=94.88 E-value=0.16 Score=28.98 Aligned_cols=58 Identities=9% Similarity=0.133 Sum_probs=38.9
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHhCCHHHHHHHHhhCCCCCchHHHHHHHHHhCCChHHHHHHHHhc
Q psy11102 5 VSQAREYYEKCHCYEKLISVYTELGDFEALESCARKLPDSSPLLKPMGEIFVKYGLCEQAVYVFDKN 71 (87)
Q Consensus 5 w~~A~~yY~~~~n~~k~ie~~~~~ed~d~L~~l~~~L~~~~~lL~~ia~~F~~~G~~~~Av~aylk~ 71 (87)
|-.-+..|...|+++++++++-+ .+..-|.+...+..+|..+...|..++|+..|.++
T Consensus 7 ~~~l~~~~~~~~~~~~A~~~~~~---------a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~ 64 (131)
T 1elr_A 7 EKELGNDAYKKKDFDTALKHYDK---------AKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKA 64 (131)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHH---------HHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHH---------HHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 33444555666666666665533 23334556677888999999999999998877654
No 99
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=94.87 E-value=0.06 Score=34.92 Aligned_cols=71 Identities=13% Similarity=0.150 Sum_probs=50.5
Q ss_pred chhHHHHHHHHHHhccH----------------HHHHHHHHHhCCHHHHHHHHhhC--------CC-C---CchHHHHHH
Q psy11102 2 TTLVSQAREYYEKCHCY----------------EKLISVYTELGDFEALESCARKL--------PD-S---SPLLKPMGE 53 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n~----------------~k~ie~~~~~ed~d~L~~l~~~L--------~~-~---~~lL~~ia~ 53 (87)
.++|++|.++|.++-.. ..+..+|+..|+|++-.+..+.. +. . ...+..+|.
T Consensus 98 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~ 177 (283)
T 3edt_B 98 RGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNVAKTKNNLAS 177 (283)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 57888888888887654 24567788888887655544332 11 1 356778899
Q ss_pred HHHhCCChHHHHHHHHhcC
Q psy11102 54 IFVKYGLCEQAVYVFDKNK 72 (87)
Q Consensus 54 ~F~~~G~~~~Av~aylk~g 72 (87)
.+...|..++|++.|.++-
T Consensus 178 ~~~~~g~~~~A~~~~~~~l 196 (283)
T 3edt_B 178 CYLKQGKYQDAETLYKEIL 196 (283)
T ss_dssp HHHHHTCHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHH
Confidence 9999999999998887653
No 100
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=94.84 E-value=0.19 Score=30.63 Aligned_cols=48 Identities=15% Similarity=0.104 Sum_probs=33.0
Q ss_pred HHHHHhCCHHHHHHHH----hhCCCCCchHHHHHHHHHhCCChHHHHHHHHh
Q psy11102 23 SVYTELGDFEALESCA----RKLPDSSPLLKPMGEIFVKYGLCEQAVYVFDK 70 (87)
Q Consensus 23 e~~~~~ed~d~L~~l~----~~L~~~~~lL~~ia~~F~~~G~~~~Av~aylk 70 (87)
.+++..|+|++-.+.. ..-|.+...+..+|..+...|..++|+.+|.+
T Consensus 26 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~ 77 (142)
T 2xcb_A 26 FNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSY 77 (142)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 3444555555444333 33466678889999999999999999876643
No 101
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=94.73 E-value=0.058 Score=34.98 Aligned_cols=70 Identities=13% Similarity=0.245 Sum_probs=48.7
Q ss_pred chhHHHHHHHHHHhccH----------------HHHHHHHHHhCCHHHHHHHHhhC---------CC---CCchHHHHHH
Q psy11102 2 TTLVSQAREYYEKCHCY----------------EKLISVYTELGDFEALESCARKL---------PD---SSPLLKPMGE 53 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n~----------------~k~ie~~~~~ed~d~L~~l~~~L---------~~---~~~lL~~ia~ 53 (87)
.++|++|.++|.++-.. ..+..+|...|+|++-.+..+.. ++ ....+..+|.
T Consensus 56 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~ 135 (283)
T 3edt_B 56 QNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKFHPDVAKQLNNLAL 135 (283)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHH
Confidence 46778888888775433 34567777888887766554442 21 1356778899
Q ss_pred HHHhCCChHHHHHHHHhc
Q psy11102 54 IFVKYGLCEQAVYVFDKN 71 (87)
Q Consensus 54 ~F~~~G~~~~Av~aylk~ 71 (87)
.+...|..++|++.|.++
T Consensus 136 ~~~~~g~~~~A~~~~~~a 153 (283)
T 3edt_B 136 LCQNQGKAEEVEYYYRRA 153 (283)
T ss_dssp HHHTTTCHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHH
Confidence 999999999998887664
No 102
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=94.71 E-value=0.12 Score=34.27 Aligned_cols=22 Identities=14% Similarity=0.295 Sum_probs=12.9
Q ss_pred HHHHHHHHhCCChHHHHHHHHh
Q psy11102 49 KPMGEIFVKYGLCEQAVYVFDK 70 (87)
Q Consensus 49 ~~ia~~F~~~G~~~~Av~aylk 70 (87)
-.+|..+...|..++|+..|.+
T Consensus 152 ~~la~~~~~~g~~~~A~~~~~~ 173 (261)
T 3qky_A 152 YEAARLYERRELYEAAAVTYEA 173 (261)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHH
Confidence 3456666666666666665544
No 103
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=94.71 E-value=0.18 Score=33.17 Aligned_cols=55 Identities=16% Similarity=0.086 Sum_probs=36.6
Q ss_pred chhHHHHHHHHHHhcc-----------HHHHHHHHHHhCCHHHHHHHHhh----CCCCCc---hHHHHHHHHH
Q psy11102 2 TTLVSQAREYYEKCHC-----------YEKLISVYTELGDFEALESCARK----LPDSSP---LLKPMGEIFV 56 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n-----------~~k~ie~~~~~ed~d~L~~l~~~----L~~~~~---lL~~ia~~F~ 56 (87)
.++|++|+.+|.+.-. +-.+..+|+..|+|++-....+. -|++.. .+-.+|..+.
T Consensus 17 ~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~ 89 (225)
T 2yhc_A 17 DGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNM 89 (225)
T ss_dssp HTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHH
Confidence 4789999999987532 34567899999999975554444 455432 3555665554
No 104
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=94.64 E-value=0.062 Score=39.97 Aligned_cols=82 Identities=6% Similarity=-0.091 Sum_probs=61.5
Q ss_pred hhHHHHHHHHHHhccH-----------HHHHHHHHHhCCHHHHHHHHhh----CCCCCchHHHHHHHHHhCCChHHHHHH
Q psy11102 3 TLVSQAREYYEKCHCY-----------EKLISVYTELGDFEALESCARK----LPDSSPLLKPMGEIFVKYGLCEQAVYV 67 (87)
Q Consensus 3 ~~w~~A~~yY~~~~n~-----------~k~ie~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~~F~~~G~~~~Av~a 67 (87)
++|++|.++|.++-.. -.+..+|...|+|++-.+..+. -|++...+..++..+...|..++|++.
T Consensus 235 g~~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~~~a~~~l~~~~~~lg~~~eAi~~ 314 (474)
T 4abn_A 235 KISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAWPEPQQREQQLLEFLSRLTSLLES 314 (474)
T ss_dssp HHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999887543 3478889999999876655544 355567789999999999999999999
Q ss_pred HHhcCCHHHHHHHHhhcC
Q psy11102 68 FDKNKHKSSQWLTVVQDK 85 (87)
Q Consensus 68 ylk~gd~k~ai~~cv~~~ 85 (87)
|-+. ..+..-.+.-.++
T Consensus 315 ~~~~-~~~~l~~~~~~l~ 331 (474)
T 4abn_A 315 KGKT-KPKKLQSMLGSLR 331 (474)
T ss_dssp TTTC-CHHHHHHHHHTCC
T ss_pred hccc-cCccHHHHHHhch
Confidence 9887 4555555544433
No 105
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=94.61 E-value=0.22 Score=27.87 Aligned_cols=56 Identities=14% Similarity=0.090 Sum_probs=36.7
Q ss_pred HHHHHHHHHhccHHHHHHHHHHhCCHHHHHHHHhhCCCCCchHHHHHHHHHhCCChHHHHHHHHh
Q psy11102 6 SQAREYYEKCHCYEKLISVYTELGDFEALESCARKLPDSSPLLKPMGEIFVKYGLCEQAVYVFDK 70 (87)
Q Consensus 6 ~~A~~yY~~~~n~~k~ie~~~~~ed~d~L~~l~~~L~~~~~lL~~ia~~F~~~G~~~~Av~aylk 70 (87)
-.-+..|...|+++++++++-+ .+..-|.+...+..+|..+...|..+.|+..|.+
T Consensus 8 ~~~~~~~~~~~~~~~A~~~~~~---------~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~ 63 (118)
T 1elw_A 8 KEKGNKALSVGNIDDALQCYSE---------AIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCK 63 (118)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHH---------HHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHcccHHHHHHHHHH---------HHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHH
Confidence 3344455556666666655432 2333455667788899999999999998876543
No 106
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=94.56 E-value=0.3 Score=27.44 Aligned_cols=54 Identities=20% Similarity=0.327 Sum_probs=34.6
Q ss_pred HHHHHHHhccHHHHHHHHHHhCCHHHHHHHHhhCCCCCchHHHHHHHHHhCCChHHHHHHHHh
Q psy11102 8 AREYYEKCHCYEKLISVYTELGDFEALESCARKLPDSSPLLKPMGEIFVKYGLCEQAVYVFDK 70 (87)
Q Consensus 8 A~~yY~~~~n~~k~ie~~~~~ed~d~L~~l~~~L~~~~~lL~~ia~~F~~~G~~~~Av~aylk 70 (87)
-+..|.+.|+++++++.+-+ ..+.-|.+...+..+|..+...|..++|+..|.+
T Consensus 15 ~~~~~~~~~~~~~A~~~~~~---------~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~ 68 (125)
T 1na0_A 15 LGNAYYKQGDYDEAIEYYQK---------ALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQK 68 (125)
T ss_dssp HHHHHHHTTCHHHHHHHHHH---------HHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHH---------HHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 33445555555555544432 2333455567788899999999999999876644
No 107
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=94.50 E-value=0.32 Score=28.23 Aligned_cols=54 Identities=17% Similarity=0.057 Sum_probs=36.5
Q ss_pred HHHHHHhccHHHHHHHHHHhCCHHHHHHHHhhCCCCC---chHHHHHHHHHhCCChHHHHHHHHhc
Q psy11102 9 REYYEKCHCYEKLISVYTELGDFEALESCARKLPDSS---PLLKPMGEIFVKYGLCEQAVYVFDKN 71 (87)
Q Consensus 9 ~~yY~~~~n~~k~ie~~~~~ed~d~L~~l~~~L~~~~---~lL~~ia~~F~~~G~~~~Av~aylk~ 71 (87)
+..|.+.|+++++++.+ .++++.-|++. ..+-.+|..+...|..++|++.|.+.
T Consensus 9 a~~~~~~~~~~~A~~~~---------~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~ 65 (129)
T 2xev_A 9 AFDALKNGKYDDASQLF---------LSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDL 65 (129)
T ss_dssp HHHHHHTTCHHHHHHHH---------HHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHhCCHHHHHHHH---------HHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 34445566666666554 33444456544 57888999999999999998877653
No 108
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=94.49 E-value=0.17 Score=38.17 Aligned_cols=73 Identities=15% Similarity=0.077 Sum_probs=56.4
Q ss_pred hhHHHHHHHHHHhcc----------------HHHHHHHHHHhCCHHHHHHHHhh--------CCCCCch----HHHHHHH
Q psy11102 3 TLVSQAREYYEKCHC----------------YEKLISVYTELGDFEALESCARK--------LPDSSPL----LKPMGEI 54 (87)
Q Consensus 3 ~~w~~A~~yY~~~~n----------------~~k~ie~~~~~ed~d~L~~l~~~--------L~~~~~l----L~~ia~~ 54 (87)
++|++|.++|.++=. +..+...|...|+|++-+.+.+. ++++||. +..+|..
T Consensus 312 g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~ 391 (433)
T 3qww_A 312 KSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRL 391 (433)
T ss_dssp SCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHH
Confidence 578999999988643 45678888899999987766544 5666643 6789999
Q ss_pred HHhCCChHHHHHHHHhcCCHH
Q psy11102 55 FVKYGLCEQAVYVFDKNKHKS 75 (87)
Q Consensus 55 F~~~G~~~~Av~aylk~gd~k 75 (87)
+...|..++|...|.|+=++.
T Consensus 392 ~~~qg~~~eA~~~~~~Al~i~ 412 (433)
T 3qww_A 392 YMGLENKAAGEKALKKAIAIM 412 (433)
T ss_dssp HHHTTCHHHHHHHHHHHHHHH
T ss_pred HHhccCHHHHHHHHHHHHHHH
Confidence 999999999999998864443
No 109
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=94.49 E-value=0.067 Score=35.40 Aligned_cols=39 Identities=21% Similarity=0.366 Sum_probs=25.7
Q ss_pred chhHHHHHHHHHHhccH----------------HHHHHHHHHhCCHHHHHHHHhh
Q psy11102 2 TTLVSQAREYYEKCHCY----------------EKLISVYTELGDFEALESCARK 40 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n~----------------~k~ie~~~~~ed~d~L~~l~~~ 40 (87)
.++|++|.++|.++-.. ..++.+|...|++++-.+..+.
T Consensus 166 ~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 220 (311)
T 3nf1_A 166 QGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKE 220 (311)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 46778888887776443 3456777788888766555433
No 110
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=94.39 E-value=0.26 Score=30.70 Aligned_cols=48 Identities=13% Similarity=0.086 Sum_probs=33.1
Q ss_pred HHHHHhCCHHHHHHHHh----hCCCCCchHHHHHHHHHhCCChHHHHHHHHh
Q psy11102 23 SVYTELGDFEALESCAR----KLPDSSPLLKPMGEIFVKYGLCEQAVYVFDK 70 (87)
Q Consensus 23 e~~~~~ed~d~L~~l~~----~L~~~~~lL~~ia~~F~~~G~~~~Av~aylk 70 (87)
.+++..|+|++-....+ .-|.+...+..+|..+...|..++|+++|.+
T Consensus 29 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~ 80 (148)
T 2vgx_A 29 FNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSY 80 (148)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 34444555544433333 3356667888999999999999999987755
No 111
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=94.37 E-value=0.092 Score=34.61 Aligned_cols=70 Identities=14% Similarity=0.242 Sum_probs=49.1
Q ss_pred chhHHHHHHHHHHhcc------------HHHHHHHHHHhCCHHHHHHHHhh-------CCCC---CchHHHHHHHHHhCC
Q psy11102 2 TTLVSQAREYYEKCHC------------YEKLISVYTELGDFEALESCARK-------LPDS---SPLLKPMGEIFVKYG 59 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n------------~~k~ie~~~~~ed~d~L~~l~~~-------L~~~---~~lL~~ia~~F~~~G 59 (87)
.++|++|..+|.++-. +..+..+++..|+|+.-.+..+. +++. ...+..+|..+...|
T Consensus 18 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g 97 (338)
T 3ro2_A 18 SGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKVLG 97 (338)
T ss_dssp TTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTT
T ss_pred hccHHHHHHHHHHHHhhCcccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhcccccHHHHHHHHHHHHHHHHcc
Confidence 4678888888887522 23667788888888876665433 2321 356778888889999
Q ss_pred ChHHHHHHHHhc
Q psy11102 60 LCEQAVYVFDKN 71 (87)
Q Consensus 60 ~~~~Av~aylk~ 71 (87)
..+.|++.|.++
T Consensus 98 ~~~~A~~~~~~a 109 (338)
T 3ro2_A 98 NFDEAIVCCQRH 109 (338)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 999888877653
No 112
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=94.32 E-value=0.15 Score=34.05 Aligned_cols=69 Identities=16% Similarity=0.087 Sum_probs=47.0
Q ss_pred hhHHHHHHHHHHhcc--------------------HHHHHHHHHHhCCHHHHHHHHhh---C-------CCC-CchH---
Q psy11102 3 TLVSQAREYYEKCHC--------------------YEKLISVYTELGDFEALESCARK---L-------PDS-SPLL--- 48 (87)
Q Consensus 3 ~~w~~A~~yY~~~~n--------------------~~k~ie~~~~~ed~d~L~~l~~~---L-------~~~-~~lL--- 48 (87)
++|++|+..|.++=. +.....|+..+|+|++-....+. + ..+ ...+
T Consensus 25 g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~e~~pd~~~A~~~~ 104 (159)
T 2hr2_A 25 GEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRRGELNQDEGKLWISA 104 (159)
T ss_dssp TCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCTTSTHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccccCCCchHHHHHHH
Confidence 567777777776532 22345567777777765544333 2 333 4677
Q ss_pred -HHHHHHHHhCCChHHHHHHHHhc
Q psy11102 49 -KPMGEIFVKYGLCEQAVYVFDKN 71 (87)
Q Consensus 49 -~~ia~~F~~~G~~~~Av~aylk~ 71 (87)
-..|.-+...|.+++|+++|-|+
T Consensus 105 ~~~rG~aL~~lgr~eEAl~~y~kA 128 (159)
T 2hr2_A 105 VYSRALALDGLGRGAEAMPEFKKV 128 (159)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHhHHHHHHHCCCHHHHHHHHHHH
Confidence 88999999999999999999775
No 113
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=94.23 E-value=0.35 Score=28.35 Aligned_cols=57 Identities=12% Similarity=0.077 Sum_probs=37.7
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHhCCHHHHHHHHhhCCCCCchHHHHHHHHHhCCChHHHHHHHHh
Q psy11102 5 VSQAREYYEKCHCYEKLISVYTELGDFEALESCARKLPDSSPLLKPMGEIFVKYGLCEQAVYVFDK 70 (87)
Q Consensus 5 w~~A~~yY~~~~n~~k~ie~~~~~ed~d~L~~l~~~L~~~~~lL~~ia~~F~~~G~~~~Av~aylk 70 (87)
|-.-+..|.+.|+++++++++-+ .+..-|.+...+..+|..+...|..+.|+..|.+
T Consensus 12 ~~~~g~~~~~~~~~~~A~~~~~~---------al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~ 68 (137)
T 3q49_B 12 LKEQGNRLFVGRKYPEAAACYGR---------AITRNPLVAVYYTNRALCYLKMQQPEQALADCRR 68 (137)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHH---------HHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcHHHHHHHHHH---------HHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 33444455555566666555432 2233355668899999999999999999987754
No 114
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=94.21 E-value=0.27 Score=28.53 Aligned_cols=52 Identities=23% Similarity=0.203 Sum_probs=37.5
Q ss_pred HHHHHHHHhCCHHHHHHHHhh----CCCCCchHHHHHHHHHhCCChHHHHHHHHhc
Q psy11102 20 KLISVYTELGDFEALESCARK----LPDSSPLLKPMGEIFVKYGLCEQAVYVFDKN 71 (87)
Q Consensus 20 k~ie~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~~F~~~G~~~~Av~aylk~ 71 (87)
.+..+|+..|+|+.-....+. -|+.......+|..+...|..++|+..|.++
T Consensus 24 ~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~a 79 (115)
T 2kat_A 24 TLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESG 79 (115)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 345566666666654444333 3556678889999999999999999998875
No 115
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=94.19 E-value=0.17 Score=40.49 Aligned_cols=70 Identities=14% Similarity=0.212 Sum_probs=50.3
Q ss_pred chhHHHHHHHHHHhcc--------HHHHHHHHHHhCCHHHHHHHHhh----CCCCCchHHHHHHHHHhCCChHHHHHHHH
Q psy11102 2 TTLVSQAREYYEKCHC--------YEKLISVYTELGDFEALESCARK----LPDSSPLLKPMGEIFVKYGLCEQAVYVFD 69 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n--------~~k~ie~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~~F~~~G~~~~Av~ayl 69 (87)
.+++++|.++|.++=. +-.+..+|...|++++-.+..+. =|+....+..+|..+...|..++|++.|.
T Consensus 56 ~g~~~eA~~~~~~Al~l~P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~ 135 (723)
T 4gyw_A 56 QGKLQEALMHYKEAIRISPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAFADAHSNLASIHKDSGNIPEAIASYR 135 (723)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 4678888888877522 33466778888888875554443 24455778889999999999999988886
Q ss_pred hc
Q psy11102 70 KN 71 (87)
Q Consensus 70 k~ 71 (87)
++
T Consensus 136 ~A 137 (723)
T 4gyw_A 136 TA 137 (723)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 116
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=94.17 E-value=0.39 Score=27.18 Aligned_cols=53 Identities=15% Similarity=0.169 Sum_probs=33.9
Q ss_pred HHHHHHhccHHHHHHHHHHhCCHHHHHHHHhhCCCCCchHHHHHHHHHhCCChHHHHHHHHh
Q psy11102 9 REYYEKCHCYEKLISVYTELGDFEALESCARKLPDSSPLLKPMGEIFVKYGLCEQAVYVFDK 70 (87)
Q Consensus 9 ~~yY~~~~n~~k~ie~~~~~ed~d~L~~l~~~L~~~~~lL~~ia~~F~~~G~~~~Av~aylk 70 (87)
+..|...|+++++++.+ .+.+..-|++...+..+|..+...|..++|++.|.+
T Consensus 19 ~~~~~~~~~~~~A~~~~---------~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~ 71 (131)
T 2vyi_A 19 GNEQMKVENFEAAVHFY---------GKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCER 71 (131)
T ss_dssp HHHHHHTTCHHHHHHHH---------HHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHccCHHHHHHHH---------HHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHH
Confidence 33444455555555443 223333455667788999999999999999876644
No 117
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=94.11 E-value=0.14 Score=30.05 Aligned_cols=69 Identities=23% Similarity=0.215 Sum_probs=44.5
Q ss_pred chhHHHHHHHHHHhcc--------------HHHHHHHHHHhCCHHHHHHHHhh-------CCCC---CchHHHHHHHHHh
Q psy11102 2 TTLVSQAREYYEKCHC--------------YEKLISVYTELGDFEALESCARK-------LPDS---SPLLKPMGEIFVK 57 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n--------------~~k~ie~~~~~ed~d~L~~l~~~-------L~~~---~~lL~~ia~~F~~ 57 (87)
.++|++|..+|.++-. +..+..+++..|+|++-.+..+. .++. ...+..+|..+..
T Consensus 22 ~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~ 101 (164)
T 3ro3_A 22 LGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTL 101 (164)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHH
Confidence 3567777777766533 33456777788888765554443 2221 2356677888888
Q ss_pred CCChHHHHHHHHh
Q psy11102 58 YGLCEQAVYVFDK 70 (87)
Q Consensus 58 ~G~~~~Av~aylk 70 (87)
.|..++|++.|.+
T Consensus 102 ~~~~~~A~~~~~~ 114 (164)
T 3ro3_A 102 LQDYEKAIDYHLK 114 (164)
T ss_dssp TTCHHHHHHHHHH
T ss_pred HhhHHHHHHHHHH
Confidence 8888888877654
No 118
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=94.08 E-value=0.22 Score=28.65 Aligned_cols=55 Identities=15% Similarity=0.131 Sum_probs=35.1
Q ss_pred HHHHHHHHHhccHHHHHHHHHHhCCHHHHHHHHhhCCCCCchHHHHHHHHHhCCChHHHHHHHH
Q psy11102 6 SQAREYYEKCHCYEKLISVYTELGDFEALESCARKLPDSSPLLKPMGEIFVKYGLCEQAVYVFD 69 (87)
Q Consensus 6 ~~A~~yY~~~~n~~k~ie~~~~~ed~d~L~~l~~~L~~~~~lL~~ia~~F~~~G~~~~Av~ayl 69 (87)
-.-+..|.+.|+++++++++-+. ++.-|++...+..+|..+...|..++|++.|.
T Consensus 20 ~~~~~~~~~~~~~~~A~~~~~~a---------l~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~ 74 (133)
T 2lni_A 20 KNKGNECFQKGDYPQAMKHYTEA---------IKRNPKDAKLYSNRAACYTKLLEFQLALKDCE 74 (133)
T ss_dssp HHHHHHHHHTTCSHHHHHHHHHH---------HTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHH---------HHcCCCcHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 33444555555666665554332 22334556788889999999999999886554
No 119
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=94.01 E-value=0.27 Score=36.87 Aligned_cols=73 Identities=15% Similarity=0.162 Sum_probs=55.3
Q ss_pred chhHHHHHHHHHHhc----------------cHHHHHHHHHHhCCHHHHHHHHhh--------CCCCCch----HHHHHH
Q psy11102 2 TTLVSQAREYYEKCH----------------CYEKLISVYTELGDFEALESCARK--------LPDSSPL----LKPMGE 53 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~----------------n~~k~ie~~~~~ed~d~L~~l~~~--------L~~~~~l----L~~ia~ 53 (87)
.++|++|.++|.++= -+..++..|...|+|++-+.+.+. ++++||. +..+|.
T Consensus 300 ~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~l~nLa~ 379 (429)
T 3qwp_A 300 HWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRGVQVMKVGK 379 (429)
T ss_dssp TTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHHHHHHHHHH
Confidence 357888888887662 245677788889999887766653 5777654 667999
Q ss_pred HHHhCCChHHHHHHHHhcCCH
Q psy11102 54 IFVKYGLCEQAVYVFDKNKHK 74 (87)
Q Consensus 54 ~F~~~G~~~~Av~aylk~gd~ 74 (87)
.+...|..++|+..|.|+=++
T Consensus 380 ~~~~~g~~~eA~~~~~~Al~i 400 (429)
T 3qwp_A 380 LQLHQGMFPQAMKNLRLAFDI 400 (429)
T ss_dssp HHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHhcCCHHHHHHHHHHHHHH
Confidence 999999999999998876444
No 120
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=93.97 E-value=0.25 Score=32.14 Aligned_cols=59 Identities=12% Similarity=0.037 Sum_probs=39.8
Q ss_pred chhHHHHHHHHHHhcc--------HHHHHHHHHHhCCHHHHHHHHhhC----CCCCchHHHHHHHHHhCCC
Q psy11102 2 TTLVSQAREYYEKCHC--------YEKLISVYTELGDFEALESCARKL----PDSSPLLKPMGEIFVKYGL 60 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n--------~~k~ie~~~~~ed~d~L~~l~~~L----~~~~~lL~~ia~~F~~~G~ 60 (87)
.+++++|..+|.++=. +-.+..+|...|++++-....+.. |++...+..+|..+...|.
T Consensus 67 ~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~~~ 137 (208)
T 3urz_A 67 NRNYDKAYLFYKELLQKAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLAANIFLGNYYYLTAE 137 (208)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhH
Confidence 3677888888877532 345677888889988766655543 5566777788877654443
No 121
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=93.90 E-value=0.28 Score=35.22 Aligned_cols=68 Identities=15% Similarity=0.198 Sum_probs=47.3
Q ss_pred chhHHHHHHHHHHhc--------cHHHHHHHHHHhCCHHHHHHHHhh----CCCCCchHHHHHHHHHhCCChHHHHHHHH
Q psy11102 2 TTLVSQAREYYEKCH--------CYEKLISVYTELGDFEALESCARK----LPDSSPLLKPMGEIFVKYGLCEQAVYVFD 69 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~--------n~~k~ie~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~~F~~~G~~~~Av~ayl 69 (87)
.++|++|.++|.++- -+..+..++...|+|+.-.+..+. -|.+...+..+|..+...|..+.|++.|.
T Consensus 289 ~~~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 368 (537)
T 3fp2_A 289 KENSQEFFKFFQKAVDLNPEYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQGKFTESEAFFN 368 (537)
T ss_dssp SSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 466777877777652 234567778888888775555444 35556777888888888888888877664
No 122
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=93.90 E-value=0.36 Score=30.84 Aligned_cols=48 Identities=15% Similarity=0.063 Sum_probs=33.9
Q ss_pred HHHHHhCCHHHHHHHHhh----CCCCCchHHHHHHHHHhCCChHHHHHHHHh
Q psy11102 23 SVYTELGDFEALESCARK----LPDSSPLLKPMGEIFVKYGLCEQAVYVFDK 70 (87)
Q Consensus 23 e~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~~F~~~G~~~~Av~aylk 70 (87)
.+++..|+|++-....+. =|.+......+|..+...|.+++|+++|.+
T Consensus 44 ~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~ 95 (151)
T 3gyz_A 44 YDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAV 95 (151)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHH
Confidence 344555555544444333 366678899999999999999999997754
No 123
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=93.83 E-value=0.37 Score=30.29 Aligned_cols=40 Identities=20% Similarity=0.184 Sum_probs=27.1
Q ss_pred HHHHHHHHhhCCCCCchHHHHHHHHHhCCChHHHHHHHHh
Q psy11102 31 FEALESCARKLPDSSPLLKPMGEIFVKYGLCEQAVYVFDK 70 (87)
Q Consensus 31 ~d~L~~l~~~L~~~~~lL~~ia~~F~~~G~~~~Av~aylk 70 (87)
...+++.+..-|++...+..+|..+...|..++|+..|.+
T Consensus 94 ~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~ 133 (176)
T 2r5s_A 94 LKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWN 133 (176)
T ss_dssp HHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 3444444544566667777788888888888888877765
No 124
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=93.68 E-value=0.46 Score=28.54 Aligned_cols=36 Identities=11% Similarity=0.175 Sum_probs=28.9
Q ss_pred HHHhhCCCCCchHHHHHHHHHhCCChHHHHHHHHhc
Q psy11102 36 SCARKLPDSSPLLKPMGEIFVKYGLCEQAVYVFDKN 71 (87)
Q Consensus 36 ~l~~~L~~~~~lL~~ia~~F~~~G~~~~Av~aylk~ 71 (87)
+.++.-|++...+..+|..+...|..++|+.+|.++
T Consensus 42 ~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~a 77 (121)
T 1hxi_A 42 AVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHA 77 (121)
T ss_dssp HHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 344445667788899999999999999999988653
No 125
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=93.61 E-value=0.17 Score=33.62 Aligned_cols=69 Identities=13% Similarity=0.062 Sum_probs=48.8
Q ss_pred chhHHHHHHHHHHhcc-----------HHHHHHHHHHhCCHHHHHHHHhh----CCCC---CchHHHHHHHHHh------
Q psy11102 2 TTLVSQAREYYEKCHC-----------YEKLISVYTELGDFEALESCARK----LPDS---SPLLKPMGEIFVK------ 57 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n-----------~~k~ie~~~~~ed~d~L~~l~~~----L~~~---~~lL~~ia~~F~~------ 57 (87)
.++|++|+++|.+.-. +-.+..||+..|+|+.-....+. -|++ ...+-.+|..+..
T Consensus 28 ~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~ 107 (261)
T 3qky_A 28 QGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYE 107 (261)
T ss_dssp TTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCCTT
T ss_pred hCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhccccc
Confidence 4789999999988632 34677889999999875544443 3543 2457778888887
Q ss_pred --CCChHHHHHHHHh
Q psy11102 58 --YGLCEQAVYVFDK 70 (87)
Q Consensus 58 --~G~~~~Av~aylk 70 (87)
.|..++|++.|.+
T Consensus 108 ~~~~~~~~A~~~~~~ 122 (261)
T 3qky_A 108 LDQTDTRKAIEAFQL 122 (261)
T ss_dssp SCCHHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHHH
Confidence 8888887766543
No 126
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=93.54 E-value=0.26 Score=34.00 Aligned_cols=23 Identities=13% Similarity=0.249 Sum_probs=11.7
Q ss_pred hHHHHHHHHHhCCChHHHHHHHH
Q psy11102 47 LLKPMGEIFVKYGLCEQAVYVFD 69 (87)
Q Consensus 47 lL~~ia~~F~~~G~~~~Av~ayl 69 (87)
.+..+|..+...|.+++|++.|.
T Consensus 157 ~~~~lg~~~~~~g~~~~A~~~~~ 179 (307)
T 2ifu_A 157 LIGKASRLLVRQQKFDEAAASLQ 179 (307)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHH
Confidence 34455555555555555554443
No 127
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=93.50 E-value=0.23 Score=35.23 Aligned_cols=51 Identities=14% Similarity=0.193 Sum_probs=24.0
Q ss_pred HHHHHHHH---hCCHHHHHHHHhh----CCCCCchHHHHHHHHHhCCChHHHHHHHHh
Q psy11102 20 KLISVYTE---LGDFEALESCARK----LPDSSPLLKPMGEIFVKYGLCEQAVYVFDK 70 (87)
Q Consensus 20 k~ie~~~~---~ed~d~L~~l~~~----L~~~~~lL~~ia~~F~~~G~~~~Av~aylk 70 (87)
.+..++.. .|+++.-.+..+. -|++...+..+|..+...|..+.|++.|.+
T Consensus 417 ~l~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 474 (514)
T 2gw1_A 417 GKATLLTRNPTVENFIEATNLLEKASKLDPRSEQAKIGLAQMKLQQEDIDEAITLFEE 474 (514)
T ss_dssp HHHHHHHTSCCTTHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHhhhhhcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 34444555 5555543333332 132334445555555555555555555543
No 128
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=93.48 E-value=0.01 Score=34.01 Aligned_cols=67 Identities=15% Similarity=0.156 Sum_probs=43.4
Q ss_pred chhHHHHHHHHHHhcc--------HHHHHHHHHHhCCHHHHHHHHhh----CCCC------CchHHHHHHHHHhCCChHH
Q psy11102 2 TTLVSQAREYYEKCHC--------YEKLISVYTELGDFEALESCARK----LPDS------SPLLKPMGEIFVKYGLCEQ 63 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n--------~~k~ie~~~~~ed~d~L~~l~~~----L~~~------~~lL~~ia~~F~~~G~~~~ 63 (87)
.++|++|+++|.++-. +-.+..|+...|+|++-.+..+. -|++ ...+..+|..+...|..+.
T Consensus 17 ~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (111)
T 2l6j_A 17 QGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTAEHVAIRSKLQYRLELAQGAVGSVQI 96 (111)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSSTTSHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred cCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHHHHhHhh
Confidence 5789999999988743 34577899999999876665554 2444 2344555555555555554
Q ss_pred HHHHH
Q psy11102 64 AVYVF 68 (87)
Q Consensus 64 Av~ay 68 (87)
|++.|
T Consensus 97 a~~~~ 101 (111)
T 2l6j_A 97 PVVEV 101 (111)
T ss_dssp CSSSS
T ss_pred hHhHH
Confidence 44433
No 129
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=93.29 E-value=0.17 Score=35.24 Aligned_cols=70 Identities=14% Similarity=0.276 Sum_probs=49.0
Q ss_pred chhHHHHHHHHHHhcc------------HHHHHHHHHHhCCHHHHHHHH-------hhCCCC---CchHHHHHHHHHhCC
Q psy11102 2 TTLVSQAREYYEKCHC------------YEKLISVYTELGDFEALESCA-------RKLPDS---SPLLKPMGEIFVKYG 59 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n------------~~k~ie~~~~~ed~d~L~~l~-------~~L~~~---~~lL~~ia~~F~~~G 59 (87)
.++|++|..+|.++-. +..+..+|+..|+|+.-.+.. +.+++. ...+..+|..+...|
T Consensus 61 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g 140 (411)
T 4a1s_A 61 AGDCRAGVAFFQAAIQAGTEDLRTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLTLAKSMNDRLGEAKSSGNLGNTLKVMG 140 (411)
T ss_dssp TTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred hCcHHHHHHHHHHHHHhcccChhHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccCchHHHHHHHHHHHHHHHCC
Confidence 3678888888877532 335677788888887766643 333331 366788899999999
Q ss_pred ChHHHHHHHHhc
Q psy11102 60 LCEQAVYVFDKN 71 (87)
Q Consensus 60 ~~~~Av~aylk~ 71 (87)
..++|++.|.++
T Consensus 141 ~~~~A~~~~~~a 152 (411)
T 4a1s_A 141 RFDEAAICCERH 152 (411)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 999888887654
No 130
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=93.26 E-value=0.18 Score=29.55 Aligned_cols=69 Identities=28% Similarity=0.306 Sum_probs=42.1
Q ss_pred chhHHHHHHHHHHhcc--------------HHHHHHHHHHhCCHHHHHHHHhh-------CCCC---CchHHHHHHHHHh
Q psy11102 2 TTLVSQAREYYEKCHC--------------YEKLISVYTELGDFEALESCARK-------LPDS---SPLLKPMGEIFVK 57 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n--------------~~k~ie~~~~~ed~d~L~~l~~~-------L~~~---~~lL~~ia~~F~~ 57 (87)
.+++++|.++|.++-. +-.+..++...|+++.-.+..+. .+.. ...+..+|..+..
T Consensus 62 ~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~ 141 (164)
T 3ro3_A 62 LGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTA 141 (164)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHH
Confidence 3567777777776443 23345677788888765554433 2221 2345667777777
Q ss_pred CCChHHHHHHHHh
Q psy11102 58 YGLCEQAVYVFDK 70 (87)
Q Consensus 58 ~G~~~~Av~aylk 70 (87)
.|..++|++.|.+
T Consensus 142 ~g~~~~A~~~~~~ 154 (164)
T 3ro3_A 142 LGNHDQAMHFAEK 154 (164)
T ss_dssp HTCHHHHHHHHHH
T ss_pred ccCHHHHHHHHHH
Confidence 7777777776654
No 131
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=93.25 E-value=0.27 Score=38.38 Aligned_cols=70 Identities=13% Similarity=-0.033 Sum_probs=53.1
Q ss_pred chhHHHHHHHHHHhc----------------cHHHHHHHHHHhCCHHHHHHHHhhC----CCCCchHHHHHHHHHhCCCh
Q psy11102 2 TTLVSQAREYYEKCH----------------CYEKLISVYTELGDFEALESCARKL----PDSSPLLKPMGEIFVKYGLC 61 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~----------------n~~k~ie~~~~~ed~d~L~~l~~~L----~~~~~lL~~ia~~F~~~G~~ 61 (87)
.+++++|.+.|.++- -+-....+|...|+|++-.+..+.. |++...+..+|..+...|..
T Consensus 404 ~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~ 483 (681)
T 2pzi_A 404 LSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDLGDVAKATRKLDDLAERVGWRWRLVWYRAVAELLTGDY 483 (681)
T ss_dssp TCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHTCH
T ss_pred ccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHhcCCHHHHHHHHHHHhccCcchHHHHHHHHHHHHHcCCH
Confidence 467888888888764 2445677888899988766555443 55667888899999999999
Q ss_pred HHHHHHHHhc
Q psy11102 62 EQAVYVFDKN 71 (87)
Q Consensus 62 ~~Av~aylk~ 71 (87)
++|++.|.++
T Consensus 484 ~~A~~~~~~a 493 (681)
T 2pzi_A 484 DSATKHFTEV 493 (681)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999988764
No 132
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=93.20 E-value=0.27 Score=32.27 Aligned_cols=68 Identities=22% Similarity=0.209 Sum_probs=43.8
Q ss_pred hhHHHHHHHHHHhc--------------cHHHHHHHHHHhCCHHHHHHHHhhC-------CCC---CchHHHHHHHHHhC
Q psy11102 3 TLVSQAREYYEKCH--------------CYEKLISVYTELGDFEALESCARKL-------PDS---SPLLKPMGEIFVKY 58 (87)
Q Consensus 3 ~~w~~A~~yY~~~~--------------n~~k~ie~~~~~ed~d~L~~l~~~L-------~~~---~~lL~~ia~~F~~~ 58 (87)
++|++|.++|.++- -+..+..++...|+++.-.+..+.. +.. ...+..+|..+...
T Consensus 197 ~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~ 276 (338)
T 3ro2_A 197 GNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLL 276 (338)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHh
Confidence 56777777776653 2345566777888877655544432 221 24567788888888
Q ss_pred CChHHHHHHHHh
Q psy11102 59 GLCEQAVYVFDK 70 (87)
Q Consensus 59 G~~~~Av~aylk 70 (87)
|..+.|++.|.+
T Consensus 277 g~~~~A~~~~~~ 288 (338)
T 3ro2_A 277 QDYEKAIDYHLK 288 (338)
T ss_dssp TCHHHHHHHHHH
T ss_pred cCHHHHHHHHHH
Confidence 888888776654
No 133
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=93.19 E-value=0.25 Score=34.77 Aligned_cols=68 Identities=15% Similarity=0.095 Sum_probs=40.9
Q ss_pred hhHHHHHHHHHHhccHH--------------HHHHHHHHhCCHHHHHHHHhh-CC-----C---CCchHHHHHHHHHhCC
Q psy11102 3 TLVSQAREYYEKCHCYE--------------KLISVYTELGDFEALESCARK-LP-----D---SSPLLKPMGEIFVKYG 59 (87)
Q Consensus 3 ~~w~~A~~yY~~~~n~~--------------k~ie~~~~~ed~d~L~~l~~~-L~-----~---~~~lL~~ia~~F~~~G 59 (87)
++|++|.++|.++-... .+..+|...|+++.-.+..+. +. . ....+..+|..+...|
T Consensus 196 ~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g 275 (378)
T 3q15_A 196 KHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAG 275 (378)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCC
Confidence 56777777776654432 245666777777654443332 11 1 1245667777777777
Q ss_pred ChHHHHHHHHh
Q psy11102 60 LCEQAVYVFDK 70 (87)
Q Consensus 60 ~~~~Av~aylk 70 (87)
..++|.+.|.+
T Consensus 276 ~~~~A~~~~~~ 286 (378)
T 3q15_A 276 QTQKAFQFIEE 286 (378)
T ss_dssp CHHHHHHHHHH
T ss_pred CHHHHHHHHHH
Confidence 77777777654
No 134
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=93.17 E-value=0.38 Score=36.86 Aligned_cols=74 Identities=15% Similarity=0.079 Sum_probs=54.8
Q ss_pred chhHHHHHHHHHHhcc----------------HHHHHHHHHHhCCHHHHHHHHhh--------CCCCCch----HHHHHH
Q psy11102 2 TTLVSQAREYYEKCHC----------------YEKLISVYTELGDFEALESCARK--------LPDSSPL----LKPMGE 53 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n----------------~~k~ie~~~~~ed~d~L~~l~~~--------L~~~~~l----L~~ia~ 53 (87)
.|+|++|..+|.++=. +..++..|...|+|++-+.+.+. ++++||. +..+|.
T Consensus 322 qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~ 401 (490)
T 3n71_A 322 EGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGL 401 (490)
T ss_dssp TTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 4678888888877532 34567788888998887665543 5776644 677899
Q ss_pred HHHhCCChHHHHHHHHhcCCHH
Q psy11102 54 IFVKYGLCEQAVYVFDKNKHKS 75 (87)
Q Consensus 54 ~F~~~G~~~~Av~aylk~gd~k 75 (87)
.+...|..++|...|.|+=++.
T Consensus 402 ~~~~~G~~~eA~~~~~~Al~i~ 423 (490)
T 3n71_A 402 TNWHAGHIEVGHGMICKAYAIL 423 (490)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHHHH
Confidence 9999999999999988764443
No 135
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=93.11 E-value=0.66 Score=27.69 Aligned_cols=51 Identities=10% Similarity=0.019 Sum_probs=33.8
Q ss_pred HHHHHHHHhCCHHHHHHHH----hhCCCCCchHHHHHHHHHhCCChHHHHHHHHh
Q psy11102 20 KLISVYTELGDFEALESCA----RKLPDSSPLLKPMGEIFVKYGLCEQAVYVFDK 70 (87)
Q Consensus 20 k~ie~~~~~ed~d~L~~l~----~~L~~~~~lL~~ia~~F~~~G~~~~Av~aylk 70 (87)
....+++..++|+.-.... +.-|++...+..+|..+...|..++|++.|.+
T Consensus 18 ~~a~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~ 72 (166)
T 1a17_A 18 TQANDYFKAKDYENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATR 72 (166)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHccCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 3344555555555433333 33455668889999999999999999876644
No 136
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.98 E-value=0.41 Score=28.06 Aligned_cols=56 Identities=16% Similarity=0.128 Sum_probs=35.0
Q ss_pred HHHHHHHHHhccHHHHHHHHHHhCCHHHHHHHHhhCCCC---CchHHHHHHHHHhCCChHHHHHHHHh
Q psy11102 6 SQAREYYEKCHCYEKLISVYTELGDFEALESCARKLPDS---SPLLKPMGEIFVKYGLCEQAVYVFDK 70 (87)
Q Consensus 6 ~~A~~yY~~~~n~~k~ie~~~~~ed~d~L~~l~~~L~~~---~~lL~~ia~~F~~~G~~~~Av~aylk 70 (87)
..-+..|.+.|+++++++++-+ .++.-|++ ...+..+|..+...|..++|++.|.+
T Consensus 32 ~~~a~~~~~~~~~~~A~~~~~~---------a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~ 90 (148)
T 2dba_A 32 RKEGNELFKCGDYGGALAAYTQ---------ALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASK 90 (148)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHH---------HHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHH---------HHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHH
Confidence 3344445555556665554432 22223443 46688889999999999999877654
No 137
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=92.96 E-value=0.59 Score=32.38 Aligned_cols=45 Identities=13% Similarity=0.096 Sum_probs=21.0
Q ss_pred HHHHHHHhCCHHHHHHHHhhC----CCCCchHHHHHHHHHhCCChHHHH
Q psy11102 21 LISVYTELGDFEALESCARKL----PDSSPLLKPMGEIFVKYGLCEQAV 65 (87)
Q Consensus 21 ~ie~~~~~ed~d~L~~l~~~L----~~~~~lL~~ia~~F~~~G~~~~Av 65 (87)
+..++...|+|++-++..+.. |++...+..+|..+...|..++++
T Consensus 206 la~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa 254 (291)
T 3mkr_A 206 QAACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEVT 254 (291)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHH
Confidence 334455555555544444331 333344555555555555554443
No 138
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=92.95 E-value=0.7 Score=31.37 Aligned_cols=70 Identities=7% Similarity=0.022 Sum_probs=44.6
Q ss_pred chhHHHHHHHHHHhccH--------------HHHHHHHHHhCCHHHHH----HHHhhCCCC-Cc-----hHHHHHHHHHh
Q psy11102 2 TTLVSQAREYYEKCHCY--------------EKLISVYTELGDFEALE----SCARKLPDS-SP-----LLKPMGEIFVK 57 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n~--------------~k~ie~~~~~ed~d~L~----~l~~~L~~~-~~-----lL~~ia~~F~~ 57 (87)
.++|++|.++|.+.-+. ..+..++...++|+.-. +.....++. +. .+..+|..+..
T Consensus 88 ~~~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~ 167 (293)
T 3u3w_A 88 QKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAE 167 (293)
T ss_dssp TTCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHH
Confidence 36788888888774331 12445555556776633 333322332 22 57889999999
Q ss_pred CCChHHHHHHHHhc
Q psy11102 58 YGLCEQAVYVFDKN 71 (87)
Q Consensus 58 ~G~~~~Av~aylk~ 71 (87)
.|..++|++.|.++
T Consensus 168 ~g~~~~A~~~~~~a 181 (293)
T 3u3w_A 168 NGYLKKGIDLFEQI 181 (293)
T ss_dssp TTCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHH
Confidence 99999998877664
No 139
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=92.94 E-value=0.28 Score=33.60 Aligned_cols=68 Identities=24% Similarity=0.235 Sum_probs=42.2
Q ss_pred hhHHHHHHHHHHhc--------------cHHHHHHHHHHhCCHHHHHHHHhh-------CCCC---CchHHHHHHHHHhC
Q psy11102 3 TLVSQAREYYEKCH--------------CYEKLISVYTELGDFEALESCARK-------LPDS---SPLLKPMGEIFVKY 58 (87)
Q Consensus 3 ~~w~~A~~yY~~~~--------------n~~k~ie~~~~~ed~d~L~~l~~~-------L~~~---~~lL~~ia~~F~~~ 58 (87)
++|++|.++|.++- -+..+..+|...|+++.-....+. .+.. ...+..+|..+...
T Consensus 201 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~ 280 (406)
T 3sf4_A 201 GNFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLL 280 (406)
T ss_dssp TBHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCchHHHHHHHHHHHHHHHh
Confidence 56666666666653 234456677777877765544433 2221 24566778888888
Q ss_pred CChHHHHHHHHh
Q psy11102 59 GLCEQAVYVFDK 70 (87)
Q Consensus 59 G~~~~Av~aylk 70 (87)
|..++|++.|.+
T Consensus 281 g~~~~A~~~~~~ 292 (406)
T 3sf4_A 281 QDYEKAIDYHLK 292 (406)
T ss_dssp TCHHHHHHHHHH
T ss_pred CcHHHHHHHHHH
Confidence 888888766544
No 140
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=92.90 E-value=0.75 Score=31.21 Aligned_cols=69 Identities=13% Similarity=0.053 Sum_probs=45.4
Q ss_pred hhHHHHHHHHHHhc-------c-------HHHHHHHHHHhCCHHHHHHHH-------hhCCCCC----chHHHHHHHHHh
Q psy11102 3 TLVSQAREYYEKCH-------C-------YEKLISVYTELGDFEALESCA-------RKLPDSS----PLLKPMGEIFVK 57 (87)
Q Consensus 3 ~~w~~A~~yY~~~~-------n-------~~k~ie~~~~~ed~d~L~~l~-------~~L~~~~----~lL~~ia~~F~~ 57 (87)
+++++|.++|.++= + +..+..+|+..|+|+.-.... +..|+.. ..+..+|..+..
T Consensus 129 ~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~ 208 (293)
T 2qfc_A 129 VDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYL 208 (293)
T ss_dssp SCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHH
Confidence 47788888877662 1 224456777888887644443 3344421 467788888888
Q ss_pred CCChHHHHHHHHhc
Q psy11102 58 YGLCEQAVYVFDKN 71 (87)
Q Consensus 58 ~G~~~~Av~aylk~ 71 (87)
.|..++|++.|.++
T Consensus 209 ~~~y~~Al~~~~ka 222 (293)
T 2qfc_A 209 DSRYEESLYQVNKA 222 (293)
T ss_dssp TTCHHHHHHHHHHH
T ss_pred HhhHHHHHHHHHHH
Confidence 88888888776553
No 141
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=92.82 E-value=0.42 Score=33.92 Aligned_cols=70 Identities=20% Similarity=0.181 Sum_probs=45.7
Q ss_pred chhHHHHHHHHHHhccH-----------------HHHHHHHHHhCCHHHHHH-------HHhhCCCC-----CchHHHHH
Q psy11102 2 TTLVSQAREYYEKCHCY-----------------EKLISVYTELGDFEALES-------CARKLPDS-----SPLLKPMG 52 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n~-----------------~k~ie~~~~~ed~d~L~~-------l~~~L~~~-----~~lL~~ia 52 (87)
.|++++|.++|.++-.. ..+..+|+..|+|++-.. +.+.++.. .......|
T Consensus 64 ~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~~~~~~~~~~~g 143 (472)
T 4g1t_A 64 KGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYRIESPELDCEEG 143 (472)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSCCCCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccccchhhHHHHHHHH
Confidence 47889999999887432 346678888999876544 33444331 13455566
Q ss_pred HHHHhC--CChHHHHHHHHhc
Q psy11102 53 EIFVKY--GLCEQAVYVFDKN 71 (87)
Q Consensus 53 ~~F~~~--G~~~~Av~aylk~ 71 (87)
.-+... +.+++|+++|.|+
T Consensus 144 ~~~~~~~~~~y~~A~~~~~ka 164 (472)
T 4g1t_A 144 WTRLKCGGNQNERAKVCFEKA 164 (472)
T ss_dssp HHHHHHCTTHHHHHHHHHHHH
T ss_pred HHHHHHccccHHHHHHHHHHH
Confidence 555444 4688999998764
No 142
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=92.69 E-value=0.31 Score=33.85 Aligned_cols=66 Identities=21% Similarity=0.298 Sum_probs=44.7
Q ss_pred HHHHHHHHHHhcc--------------HHHHHHHHHHhCCHHHHHHHHhhC----CCCC------chHHHHHHHHHhCCC
Q psy11102 5 VSQAREYYEKCHC--------------YEKLISVYTELGDFEALESCARKL----PDSS------PLLKPMGEIFVKYGL 60 (87)
Q Consensus 5 w~~A~~yY~~~~n--------------~~k~ie~~~~~ed~d~L~~l~~~L----~~~~------~lL~~ia~~F~~~G~ 60 (87)
|++|.++|.++-. +..+..+|+..|+|++-.+..+.. ++.. ..+..+|..+...|.
T Consensus 199 ~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~ 278 (411)
T 4a1s_A 199 LTRAVEFYQENLKLMRDLGDRGAQGRACGNLGNTYYLLGDFQAAIEHHQERLRIAREFGDRAAERRANSNLGNSHIFLGQ 278 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHCcC
Confidence 7888888877633 334667788888887755544432 2211 267788888889999
Q ss_pred hHHHHHHHHh
Q psy11102 61 CEQAVYVFDK 70 (87)
Q Consensus 61 ~~~Av~aylk 70 (87)
.++|++.|.+
T Consensus 279 ~~~A~~~~~~ 288 (411)
T 4a1s_A 279 FEDAAEHYKR 288 (411)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888776654
No 143
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=92.68 E-value=0.33 Score=34.03 Aligned_cols=70 Identities=13% Similarity=0.049 Sum_probs=48.9
Q ss_pred chhHHHHHHHHHHhcc--------------HHHHHHHHHHhCCHHHHHHHHhh-------CCC--C-CchHHHHHHHHHh
Q psy11102 2 TTLVSQAREYYEKCHC--------------YEKLISVYTELGDFEALESCARK-------LPD--S-SPLLKPMGEIFVK 57 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n--------------~~k~ie~~~~~ed~d~L~~l~~~-------L~~--~-~~lL~~ia~~F~~ 57 (87)
.++|++|.++|.++-. +..+..+|...|+|+.-.+..+. ... . ...+..+|..+..
T Consensus 197 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~ 276 (383)
T 3ulq_A 197 LKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYK 276 (383)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHH
Confidence 3678888888877653 34467788888888765544333 122 1 3557888999999
Q ss_pred CCChHHHHHHHHhc
Q psy11102 58 YGLCEQAVYVFDKN 71 (87)
Q Consensus 58 ~G~~~~Av~aylk~ 71 (87)
.|..++|.+.|.++
T Consensus 277 ~g~~~~A~~~~~~a 290 (383)
T 3ulq_A 277 LGKIDKAHEYHSKG 290 (383)
T ss_dssp TTCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 99999998887664
No 144
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=92.65 E-value=0.18 Score=34.64 Aligned_cols=70 Identities=14% Similarity=0.239 Sum_probs=47.4
Q ss_pred chhHHHHHHHHHHhcc------------HHHHHHHHHHhCCHHHHHHHHh-------hCCCC---CchHHHHHHHHHhCC
Q psy11102 2 TTLVSQAREYYEKCHC------------YEKLISVYTELGDFEALESCAR-------KLPDS---SPLLKPMGEIFVKYG 59 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n------------~~k~ie~~~~~ed~d~L~~l~~-------~L~~~---~~lL~~ia~~F~~~G 59 (87)
.++|++|..+|.++-. +..+..+++..|+|+.-....+ .+++. ...+..+|..+...|
T Consensus 22 ~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g 101 (406)
T 3sf4_A 22 SGDCRAGVSFFEAAVQVGTEDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLARTIGDQLGEAKASGNLGNTLKVLG 101 (406)
T ss_dssp TTCHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred hccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHcC
Confidence 4678888888876532 2356677888888877666433 33331 356777888888888
Q ss_pred ChHHHHHHHHhc
Q psy11102 60 LCEQAVYVFDKN 71 (87)
Q Consensus 60 ~~~~Av~aylk~ 71 (87)
..+.|++.|.++
T Consensus 102 ~~~~A~~~~~~a 113 (406)
T 3sf4_A 102 NFDEAIVCCQRH 113 (406)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 888888776553
No 145
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=92.62 E-value=0.28 Score=38.28 Aligned_cols=70 Identities=11% Similarity=-0.048 Sum_probs=49.0
Q ss_pred chhHHHHHHHHHHhcc--------HHHHHHHHHHhCCHHHHHHHHhh----CCCCCchHHHHHHHHHhCCChHHHHHHHH
Q psy11102 2 TTLVSQAREYYEKCHC--------YEKLISVYTELGDFEALESCARK----LPDSSPLLKPMGEIFVKYGLCEQAVYVFD 69 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n--------~~k~ie~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~~F~~~G~~~~Av~ayl 69 (87)
.++|++|.+.|.++=. +-.+..+|...|+|++ .+..+. =|++......+|..+...|..++|++.|.
T Consensus 480 ~g~~~~A~~~~~~al~l~P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~ 558 (681)
T 2pzi_A 480 TGDYDSATKHFTEVLDTFPGELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGVISAAFGLARARSAEGDRVGAVRTLD 558 (681)
T ss_dssp HTCHHHHHHHHHHHHHHSTTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCchHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 3567777777777532 2356677788888877 444333 24555778888888888888888888888
Q ss_pred hcC
Q psy11102 70 KNK 72 (87)
Q Consensus 70 k~g 72 (87)
++=
T Consensus 559 ~al 561 (681)
T 2pzi_A 559 EVP 561 (681)
T ss_dssp TSC
T ss_pred hhc
Confidence 763
No 146
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=92.48 E-value=0.41 Score=33.51 Aligned_cols=35 Identities=14% Similarity=0.330 Sum_probs=20.1
Q ss_pred hhHHHHHHHHHHh-------cc-------HHHHHHHHHHhCCHHHHHHH
Q psy11102 3 TLVSQAREYYEKC-------HC-------YEKLISVYTELGDFEALESC 37 (87)
Q Consensus 3 ~~w~~A~~yY~~~-------~n-------~~k~ie~~~~~ed~d~L~~l 37 (87)
+++++|.++|.++ ++ +-.+..+|...|++++-.+.
T Consensus 238 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~ 286 (383)
T 3ulq_A 238 SQYEDAIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEY 286 (383)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHCCCHHHHHHH
Confidence 4555555555554 33 56666666666666554443
No 147
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=92.29 E-value=1 Score=31.18 Aligned_cols=43 Identities=16% Similarity=0.038 Sum_probs=17.2
Q ss_pred HHHHhCCHHHHHHHHhhCCCCCchHHHHHHHHHhCCChHHHHHH
Q psy11102 24 VYTELGDFEALESCARKLPDSSPLLKPMGEIFVKYGLCEQAVYV 67 (87)
Q Consensus 24 ~~~~~ed~d~L~~l~~~L~~~~~lL~~ia~~F~~~G~~~~Av~a 67 (87)
++...|++++-.+..+. |.+.+....+|..+.+.|..++|.+.
T Consensus 110 ~~~~~g~~~~Al~~l~~-~~~~~~~~~l~~~~~~~g~~~~A~~~ 152 (291)
T 3mkr_A 110 IYFYDQNPDAALRTLHQ-GDSLECMAMTVQILLKLDRLDLARKE 152 (291)
T ss_dssp HHHHTTCHHHHHHHHTT-CCSHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHCCCHHHHHHHHhC-CCCHHHHHHHHHHHHHCCCHHHHHHH
Confidence 33344444444433333 32233333444444444444444433
No 148
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=92.10 E-value=0.58 Score=31.78 Aligned_cols=68 Identities=13% Similarity=0.067 Sum_probs=49.0
Q ss_pred hhHHHHHHHHHHhcc--------------HHHHHHHHHHhCCHHHHHHH-------HhhCCCCC----chHHHHHHHHHh
Q psy11102 3 TLVSQAREYYEKCHC--------------YEKLISVYTELGDFEALESC-------ARKLPDSS----PLLKPMGEIFVK 57 (87)
Q Consensus 3 ~~w~~A~~yY~~~~n--------------~~k~ie~~~~~ed~d~L~~l-------~~~L~~~~----~lL~~ia~~F~~ 57 (87)
+++++|.++|.++=. +-.+..+|+..|+|+.-... .+.+|.+. ..+..+|..+..
T Consensus 129 ~~~~~Ai~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~ 208 (293)
T 3u3w_A 129 VDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYL 208 (293)
T ss_dssp SCHHHHHHHHHHHHHTCCCCSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHH
Confidence 478888888887643 45666788888888764433 33443432 467789999999
Q ss_pred CCChHHHHHHHHh
Q psy11102 58 YGLCEQAVYVFDK 70 (87)
Q Consensus 58 ~G~~~~Av~aylk 70 (87)
.|.+++|++.|.+
T Consensus 209 ~~~y~~A~~~~~~ 221 (293)
T 3u3w_A 209 DSRYEESLYQVNK 221 (293)
T ss_dssp TTCHHHHHHHHHH
T ss_pred HhHHHHHHHHHHH
Confidence 9999999987654
No 149
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=92.07 E-value=1.1 Score=30.56 Aligned_cols=66 Identities=12% Similarity=0.123 Sum_probs=40.6
Q ss_pred HHHHHHHHHHhcc-H--------HHHHHHHHHhCCHHHHHHHHhh---CCC-CCc-hHHHHHHHHHhCCChHHHHHHHHh
Q psy11102 5 VSQAREYYEKCHC-Y--------EKLISVYTELGDFEALESCARK---LPD-SSP-LLKPMGEIFVKYGLCEQAVYVFDK 70 (87)
Q Consensus 5 w~~A~~yY~~~~n-~--------~k~ie~~~~~ed~d~L~~l~~~---L~~-~~~-lL~~ia~~F~~~G~~~~Av~aylk 70 (87)
+++|...|.++=. . ...+..+...|+++...++-+. ++. +.. .....|......|..+.|+..|.+
T Consensus 80 ~~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 159 (308)
T 2ond_A 80 SDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKK 159 (308)
T ss_dssp HHHHHHHHHHHHTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 3666666666543 1 2445555666777666555443 233 333 677778877778888888777765
No 150
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=92.04 E-value=1.2 Score=28.28 Aligned_cols=25 Identities=12% Similarity=-0.035 Sum_probs=20.5
Q ss_pred chHHHHHHHHHhCCChHHHHHHHHh
Q psy11102 46 PLLKPMGEIFVKYGLCEQAVYVFDK 70 (87)
Q Consensus 46 ~lL~~ia~~F~~~G~~~~Av~aylk 70 (87)
..+..+|..+...|..++|+..|.+
T Consensus 89 ~~~~~la~~~~~~~~~~~A~~~~~~ 113 (198)
T 2fbn_A 89 SCNLNLATCYNKNKDYPKAIDHASK 113 (198)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 5778899999999999999876654
No 151
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=91.97 E-value=1.2 Score=27.50 Aligned_cols=68 Identities=18% Similarity=0.286 Sum_probs=36.6
Q ss_pred hhHHHHHHHHHHhcc--------------HHHHHHHHHHhCCHHHHHHHH-------hhCCCC----CchHHHHHHHHHh
Q psy11102 3 TLVSQAREYYEKCHC--------------YEKLISVYTELGDFEALESCA-------RKLPDS----SPLLKPMGEIFVK 57 (87)
Q Consensus 3 ~~w~~A~~yY~~~~n--------------~~k~ie~~~~~ed~d~L~~l~-------~~L~~~----~~lL~~ia~~F~~ 57 (87)
++|++|..+|.++-. +..+..++...|+|+.-.+.. +..++. ...+..+|..+..
T Consensus 40 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~ 119 (203)
T 3gw4_A 40 DRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVALH 119 (203)
T ss_dssp TCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHH
Confidence 556666666655533 223344566666666533332 223322 1335666777777
Q ss_pred CCChHHHHHHHHh
Q psy11102 58 YGLCEQAVYVFDK 70 (87)
Q Consensus 58 ~G~~~~Av~aylk 70 (87)
.|..++|...|.+
T Consensus 120 ~g~~~~A~~~~~~ 132 (203)
T 3gw4_A 120 FGDLAGARQEYEK 132 (203)
T ss_dssp HTCHHHHHHHHHH
T ss_pred hCCHHHHHHHHHH
Confidence 7777777665543
No 152
>1pgy_A SWA2P; UBA, ubiquitin, auxilin, ubiquitin-associated domain, protein binding; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1
Probab=91.88 E-value=0.075 Score=29.10 Aligned_cols=23 Identities=26% Similarity=0.589 Sum_probs=20.1
Q ss_pred hHHHHHHHHHHhccHHHHHHHHH
Q psy11102 4 LVSQAREYYEKCHCYEKLISVYT 26 (87)
Q Consensus 4 ~w~~A~~yY~~~~n~~k~ie~~~ 26 (87)
+|++|..||.++.-++..++..-
T Consensus 20 ~id~A~~~Ye~gi~ye~~ie~~k 42 (47)
T 1pgy_A 20 SIEEATEFYENDVTYERYLEILK 42 (47)
T ss_dssp CSHHHHHHHHHHCSSHHHHHHHH
T ss_pred ChhhHHHHHHcCchHHHHHHHHH
Confidence 68999999999999999888653
No 153
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=91.82 E-value=0.62 Score=30.81 Aligned_cols=24 Identities=8% Similarity=0.164 Sum_probs=12.4
Q ss_pred chHHHHHHHHHh----CCChHHHHHHHH
Q psy11102 46 PLLKPMGEIFVK----YGLCEQAVYVFD 69 (87)
Q Consensus 46 ~lL~~ia~~F~~----~G~~~~Av~ayl 69 (87)
..+..+|..+.. .|..++|++.|.
T Consensus 75 ~a~~~lg~~~~~g~~~~~~~~~A~~~~~ 102 (273)
T 1ouv_A 75 NGCHLLGNLYYSGQGVSQNTNKALQYYS 102 (273)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCcccCHHHHHHHHH
Confidence 444455555555 555555555443
No 154
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=91.70 E-value=1 Score=30.85 Aligned_cols=30 Identities=7% Similarity=0.064 Sum_probs=18.0
Q ss_pred CCCCchHHHHHHHHHhCCChHHHHHHHHhc
Q psy11102 42 PDSSPLLKPMGEIFVKYGLCEQAVYVFDKN 71 (87)
Q Consensus 42 ~~~~~lL~~ia~~F~~~G~~~~Av~aylk~ 71 (87)
|++..+....|.++.+.|..+.|...|.++
T Consensus 200 p~~~~~~~~~~~~~~~~g~~~~A~~~~~~a 229 (308)
T 2ond_A 200 GDIPEYVLAYIDYLSHLNEDNNTRVLFERV 229 (308)
T ss_dssp TTCHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 444455666666666666666666666543
No 155
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=91.66 E-value=0.37 Score=35.72 Aligned_cols=69 Identities=12% Similarity=-0.056 Sum_probs=51.6
Q ss_pred hhHHHHHHHHHHhcc--------HHHHHHHHHHh--------CCHHHHHHHHhh----CC---CCCchHHHHHHHHHhCC
Q psy11102 3 TLVSQAREYYEKCHC--------YEKLISVYTEL--------GDFEALESCARK----LP---DSSPLLKPMGEIFVKYG 59 (87)
Q Consensus 3 ~~w~~A~~yY~~~~n--------~~k~ie~~~~~--------ed~d~L~~l~~~----L~---~~~~lL~~ia~~F~~~G 59 (87)
++|++|.++|.++=. +..+..+|... ++|++-.+..+. -| .+...+..+|..+...|
T Consensus 193 g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~~g 272 (474)
T 4abn_A 193 RHVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEE 272 (474)
T ss_dssp HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHTT
T ss_pred hhHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHcC
Confidence 789999999988632 34566677776 777765554444 35 45578899999999999
Q ss_pred ChHHHHHHHHhc
Q psy11102 60 LCEQAVYVFDKN 71 (87)
Q Consensus 60 ~~~~Av~aylk~ 71 (87)
..++|++.|.++
T Consensus 273 ~~~~A~~~~~~a 284 (474)
T 4abn_A 273 SYGEALEGFSQA 284 (474)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 999999988764
No 156
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=91.44 E-value=1.1 Score=29.21 Aligned_cols=51 Identities=25% Similarity=0.312 Sum_probs=36.1
Q ss_pred HHHHHHHHhCCHHHHH----HHHhhCCCCC---chHHHHHHHHHhCCChHHHHHHHHh
Q psy11102 20 KLISVYTELGDFEALE----SCARKLPDSS---PLLKPMGEIFVKYGLCEQAVYVFDK 70 (87)
Q Consensus 20 k~ie~~~~~ed~d~L~----~l~~~L~~~~---~lL~~ia~~F~~~G~~~~Av~aylk 70 (87)
....+|+..|+|+.-. ++++.-|++. +.+..+|..+...|..++|++.|-+
T Consensus 152 ~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~A~~~~~~ 209 (225)
T 2yhc_A 152 SVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEKVAKI 209 (225)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHSTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHcCcHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHHHHcCCcHHHHHHHHH
Confidence 3456788888887654 4444456542 5688888888888888888887754
No 157
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=91.37 E-value=1.8 Score=30.19 Aligned_cols=37 Identities=14% Similarity=-0.053 Sum_probs=23.8
Q ss_pred hhHHHHHHHHHHhcc-------------HHHHHHHHHHhCCHHHHHHHHh
Q psy11102 3 TLVSQAREYYEKCHC-------------YEKLISVYTELGDFEALESCAR 39 (87)
Q Consensus 3 ~~w~~A~~yY~~~~n-------------~~k~ie~~~~~ed~d~L~~l~~ 39 (87)
+++++|.++|.++-. +-.+..+|+..|+++.-....+
T Consensus 236 ~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 285 (378)
T 3q15_A 236 GDDQMAVEHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIE 285 (378)
T ss_dssp TCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 567777777777654 3445667777777776544443
No 158
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=91.31 E-value=0.76 Score=24.81 Aligned_cols=57 Identities=23% Similarity=0.306 Sum_probs=38.0
Q ss_pred chhHHHHHHHHHHhcc--------HHHHHHHHHHhCCHHHHHHHHhh----CCCCCchHHHHHHHHHhC
Q psy11102 2 TTLVSQAREYYEKCHC--------YEKLISVYTELGDFEALESCARK----LPDSSPLLKPMGEIFVKY 58 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n--------~~k~ie~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~~F~~~ 58 (87)
.++|++|..+|.++-. +..+..++...+++++-.+..+. -|.+...+..+|..+...
T Consensus 22 ~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~l~~~~~~~ 90 (91)
T 1na3_A 22 QGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAKQNLGNAKQKQ 90 (91)
T ss_dssp TTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhc
Confidence 4678889988887632 34677888899999876554443 344556666676665543
No 159
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=91.25 E-value=0.58 Score=30.96 Aligned_cols=69 Identities=17% Similarity=0.134 Sum_probs=38.9
Q ss_pred chhHHHHHHHHHHhccH------HHHHHHHHH----hCCHHHHHHHHhhC-CCC-CchHHHHHHHHHh----CCChHHHH
Q psy11102 2 TTLVSQAREYYEKCHCY------EKLISVYTE----LGDFEALESCARKL-PDS-SPLLKPMGEIFVK----YGLCEQAV 65 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n~------~k~ie~~~~----~ed~d~L~~l~~~L-~~~-~~lL~~ia~~F~~----~G~~~~Av 65 (87)
.+++++|.++|.++-.. -.+..+|.. .+++++-.+..+.. ..+ ...+..+|..+.. .|..++|+
T Consensus 55 ~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~~~~a~~~lg~~~~~~~~~~~~~~~A~ 134 (273)
T 1ouv_A 55 EKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAV 134 (273)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHCSSSCCCHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcCCccHHHHHHHHHHcCCCcccCHHHHH
Confidence 34566666666665321 234445555 66666555444432 223 3556677777776 77777777
Q ss_pred HHHHh
Q psy11102 66 YVFDK 70 (87)
Q Consensus 66 ~aylk 70 (87)
+.|.+
T Consensus 135 ~~~~~ 139 (273)
T 1ouv_A 135 EYFTK 139 (273)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66654
No 160
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=90.97 E-value=1.2 Score=30.45 Aligned_cols=29 Identities=17% Similarity=0.249 Sum_probs=16.9
Q ss_pred CCCCchHHHHHHHHHhCCChHHHHHHHHh
Q psy11102 42 PDSSPLLKPMGEIFVKYGLCEQAVYVFDK 70 (87)
Q Consensus 42 ~~~~~lL~~ia~~F~~~G~~~~Av~aylk 70 (87)
|++......+|..+...|..++|++.|.+
T Consensus 216 P~~~~~~~~la~~l~~~g~~~~A~~~l~~ 244 (287)
T 3qou_A 216 PEDAALATQLALQLHQVGRNEEALELLFG 244 (287)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 44445555666666666666666666554
No 161
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=90.62 E-value=0.28 Score=34.88 Aligned_cols=31 Identities=13% Similarity=-0.089 Sum_probs=17.9
Q ss_pred CCCCchHHHHHHHHHhCCChHHHHHHHHhcC
Q psy11102 42 PDSSPLLKPMGEIFVKYGLCEQAVYVFDKNK 72 (87)
Q Consensus 42 ~~~~~lL~~ia~~F~~~G~~~~Av~aylk~g 72 (87)
|.+...+..+|..+...|..++|++.|.|+=
T Consensus 427 p~~~~~~~~LG~~~~~~g~~~~A~~~y~kAL 457 (472)
T 4g1t_A 427 GADSEALHVLAFLQELNEKMQQADEDSERGL 457 (472)
T ss_dssp C-CTTHHHHHHHHHHHHHHCC----------
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 5556789999999999999999999998753
No 162
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=90.33 E-value=0.71 Score=28.90 Aligned_cols=28 Identities=7% Similarity=-0.013 Sum_probs=15.9
Q ss_pred CCchHHHHHHHHHhCCChHHHHHHHHhc
Q psy11102 44 SSPLLKPMGEIFVKYGLCEQAVYVFDKN 71 (87)
Q Consensus 44 ~~~lL~~ia~~F~~~G~~~~Av~aylk~ 71 (87)
+...+..+|..+...|..++|+..|.+.
T Consensus 39 ~~~a~~~la~~~~~~g~~~~A~~~~~~a 66 (176)
T 2r5s_A 39 RGDVKLAKADCLLETKQFELAQELLATI 66 (176)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred cHHHHHHHHHHHHHCCCHHHHHHHHHHh
Confidence 3455555666666666666666555443
No 163
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=89.97 E-value=1.1 Score=27.70 Aligned_cols=68 Identities=12% Similarity=0.085 Sum_probs=41.6
Q ss_pred hhHHHHHHHHHHhc--------cHHHHHHHHHHhCCHHHHHHHHhh----CCCCCchHHHHHHH-HHhCCCh--HHHHHH
Q psy11102 3 TLVSQAREYYEKCH--------CYEKLISVYTELGDFEALESCARK----LPDSSPLLKPMGEI-FVKYGLC--EQAVYV 67 (87)
Q Consensus 3 ~~w~~A~~yY~~~~--------n~~k~ie~~~~~ed~d~L~~l~~~----L~~~~~lL~~ia~~-F~~~G~~--~~Av~a 67 (87)
+++++|..+|.++- -+..+..+|+..|+|+.-....+. -|.+...+..+|.. +...|.. +.|+..
T Consensus 24 ~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~la~~l~~~~~~~~~~~A~~~ 103 (177)
T 2e2e_A 24 QNPEAQLQALQDKIRANPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQLRGENAELYAALATVLYYQASQHMTAQTRAM 103 (177)
T ss_dssp ---CCCCHHHHHHHHHCCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHTTTCCCHHHHHH
T ss_pred cCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhcCCcchHHHHHH
Confidence 44555555555431 234566677777777765544443 35566778888988 7788887 888776
Q ss_pred HHh
Q psy11102 68 FDK 70 (87)
Q Consensus 68 ylk 70 (87)
|.+
T Consensus 104 ~~~ 106 (177)
T 2e2e_A 104 IDK 106 (177)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 164
>2qx5_A Nucleoporin NIC96; mRNA transport, nuclear pore complex, nucleus, protein transport, translocation, transport, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2rfo_A
Probab=89.93 E-value=2.1 Score=34.38 Aligned_cols=82 Identities=15% Similarity=0.084 Sum_probs=56.9
Q ss_pred chhHHHHHHHHHHhccH----------HHHHHHHHHhCCHHHHH-----------HHHhh-CC-----C----CCchHHH
Q psy11102 2 TTLVSQAREYYEKCHCY----------EKLISVYTELGDFEALE-----------SCARK-LP-----D----SSPLLKP 50 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n~----------~k~ie~~~~~ed~d~L~-----------~l~~~-L~-----~----~~~lL~~ 50 (87)
..|...|++||..-.-. +-.-|.....++|+.|- .+++. .+ + ...++..
T Consensus 369 ~td~~~Al~Y~~li~l~~g~~~~~~~~~~l~eLvletr~f~~LLG~i~~dG~r~~G~i~~~~~li~l~d~~~~~~~i~~~ 448 (661)
T 2qx5_A 369 YSDPRVAVEYLVLITLNEGPTDVELCHEALRELVLETKEFTVLLGKIGRDGARIPGVIEERQPLLHVRDEKEFLHTITEQ 448 (661)
T ss_dssp TTCHHHHHHHHHGGGGSCCHHHHHHHHHHHHHHHHHHCCHHHHHCEECTTSCEECCHHHHTCGGGTCSCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHhcccHHHHcCCcCCCCCcCcchHHHhhcccccccHHHHHHHHHHH
Confidence 35788999999865332 22344455667888774 23332 11 1 1134456
Q ss_pred HHHHHHhCCChHHHHHHHHhcCCHHHHHHHHhh
Q psy11102 51 MGEIFVKYGLCEQAVYVFDKNKHKSSQWLTVVQ 83 (87)
Q Consensus 51 ia~~F~~~G~~~~Av~aylk~gd~k~ai~~cv~ 83 (87)
.|..+...|..+.||..|.-+|++..+|++.-+
T Consensus 449 aA~~ae~~G~~~dAi~LY~La~~~d~vl~lln~ 481 (661)
T 2qx5_A 449 AARRADEDGRIYDSILLYQLAEEYDIVITLVNS 481 (661)
T ss_dssp HHHHHHHTTCHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHhcCHHHHHHHHHH
Confidence 788999999999999999999999999988643
No 165
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=89.26 E-value=0.96 Score=32.59 Aligned_cols=48 Identities=10% Similarity=0.034 Sum_probs=23.7
Q ss_pred HHHHhCCHHHHHHHHhhCCCC-Cc-----hHHHHHHHHHhCCChHHHHHHHHhc
Q psy11102 24 VYTELGDFEALESCARKLPDS-SP-----LLKPMGEIFVKYGLCEQAVYVFDKN 71 (87)
Q Consensus 24 ~~~~~ed~d~L~~l~~~L~~~-~~-----lL~~ia~~F~~~G~~~~Av~aylk~ 71 (87)
.++..++|+..+...+....- ++ .--.+|..+...|+.++|...|.+.
T Consensus 144 l~~~~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a 197 (282)
T 4f3v_A 144 VYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLALFTEAERRLTEA 197 (282)
T ss_dssp HHHHTTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 555555555555555433221 22 2233455555555555555555554
No 166
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=89.22 E-value=2 Score=29.31 Aligned_cols=55 Identities=13% Similarity=0.065 Sum_probs=37.9
Q ss_pred HHHHHHHHhccHHHHHHHHHHhCCHHHHHHHHhhCCCCCchHHHHHHHHHhCCChHHHHHHHHh
Q psy11102 7 QAREYYEKCHCYEKLISVYTELGDFEALESCARKLPDSSPLLKPMGEIFVKYGLCEQAVYVFDK 70 (87)
Q Consensus 7 ~A~~yY~~~~n~~k~ie~~~~~ed~d~L~~l~~~L~~~~~lL~~ia~~F~~~G~~~~Av~aylk 70 (87)
.-+..|.+.|++++|+++|- +.+..-|.+...+..+|..+...|..++|++.|.+
T Consensus 9 ~~g~~~~~~g~~~~A~~~~~---------~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~ 63 (281)
T 2c2l_A 9 EQGNRLFVGRKYPEAAACYG---------RAITRNPLVAVYYTNRALCYLKMQQPEQALADCRR 63 (281)
T ss_dssp HHHHHHHHTTCHHHHHHHHH---------HHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHH---------HHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 33445555666666666553 22333466678899999999999999999887654
No 167
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=89.05 E-value=2.5 Score=28.51 Aligned_cols=49 Identities=14% Similarity=0.221 Sum_probs=32.3
Q ss_pred HHHHHhCCHHHHHHHHhh-C---CCC-C-----chHHHHHHHHHhCCChHHHHHHHHhc
Q psy11102 23 SVYTELGDFEALESCARK-L---PDS-S-----PLLKPMGEIFVKYGLCEQAVYVFDKN 71 (87)
Q Consensus 23 e~~~~~ed~d~L~~l~~~-L---~~~-~-----~lL~~ia~~F~~~G~~~~Av~aylk~ 71 (87)
.++...++|+.-....+. | ++. + ..+..+|..+...|..++|++.|.++
T Consensus 123 ~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~ka 181 (293)
T 2qfc_A 123 AYVLKKVDYEYCILELKKLLNQQLTGIDVYQNLYIENAIANIYAENGYLKKGIDLFEQI 181 (293)
T ss_dssp HHHHTSSCHHHHHHHHHHHHTTCCCSSCTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 344556687765554322 2 221 1 25678899999999999998888764
No 168
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=88.88 E-value=0.81 Score=25.51 Aligned_cols=63 Identities=19% Similarity=0.286 Sum_probs=40.0
Q ss_pred chhHHHHHHHHHHhc---------cHHHHHHHHHHhCCHHHHHHHHhhC----CCCCchHHHHHHHHHhCCChHHHHHHH
Q psy11102 2 TTLVSQAREYYEKCH---------CYEKLISVYTELGDFEALESCARKL----PDSSPLLKPMGEIFVKYGLCEQAVYVF 68 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~---------n~~k~ie~~~~~ed~d~L~~l~~~L----~~~~~lL~~ia~~F~~~G~~~~Av~ay 68 (87)
.++|++|+++|.++- -+-.+..+|+..|+|++-.+..+.. |++...... +...+|...|
T Consensus 13 ~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~--------~~~~~a~~~~ 84 (99)
T 2kc7_A 13 QGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR--------KMVMDILNFY 84 (99)
T ss_dssp HTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH--------HHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH--------HHHHHHHHHH
Confidence 478999999998762 2234678899999998766555542 444333211 5556666666
Q ss_pred HhcC
Q psy11102 69 DKNK 72 (87)
Q Consensus 69 lk~g 72 (87)
-+.+
T Consensus 85 ~~~~ 88 (99)
T 2kc7_A 85 NKDM 88 (99)
T ss_dssp CCTT
T ss_pred HHHh
Confidence 5554
No 169
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=88.77 E-value=0.31 Score=34.22 Aligned_cols=68 Identities=13% Similarity=0.127 Sum_probs=42.3
Q ss_pred chhHHHHHHHHHHhcc-------------------------HHHHHHHHHHhCCHHHHHHHHhhCC-------CC--Cc-
Q psy11102 2 TTLVSQAREYYEKCHC-------------------------YEKLISVYTELGDFEALESCARKLP-------DS--SP- 46 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n-------------------------~~k~ie~~~~~ed~d~L~~l~~~L~-------~~--~~- 46 (87)
.++|++|.+.|.++-+ +..+..+|...|+|+++.+....+- +. ..
T Consensus 17 ~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 96 (434)
T 4b4t_Q 17 EKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKV 96 (434)
T ss_dssp HTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccchHHHHH
Confidence 3678888888876532 4567788888888888877666541 11 11
Q ss_pred hHHHHHHHHHhCCChHHHHHHHH
Q psy11102 47 LLKPMGEIFVKYGLCEQAVYVFD 69 (87)
Q Consensus 47 lL~~ia~~F~~~G~~~~Av~ayl 69 (87)
....+|......|..+.|++.|.
T Consensus 97 ~~~~l~~~~~~~~~~~~a~~~~~ 119 (434)
T 4b4t_Q 97 LKTLIEKFEQVPDSLDDQIFVCE 119 (434)
T ss_dssp HHHHHHHHCSCCSCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCHHHHHHHHH
Confidence 23334555556677777665543
No 170
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=88.68 E-value=1.3 Score=31.02 Aligned_cols=70 Identities=10% Similarity=0.016 Sum_probs=49.2
Q ss_pred hhHHHHHHHHHHhcc--------------HHHHHHHHHHhCCHHHHHHHHhhC-------CCC---CchHHHHHHHHHhC
Q psy11102 3 TLVSQAREYYEKCHC--------------YEKLISVYTELGDFEALESCARKL-------PDS---SPLLKPMGEIFVKY 58 (87)
Q Consensus 3 ~~w~~A~~yY~~~~n--------------~~k~ie~~~~~ed~d~L~~l~~~L-------~~~---~~lL~~ia~~F~~~ 58 (87)
+++++|.++|.++-. ..+++.+|...|+|+....+.+.+ ++. ...+..+|..+...
T Consensus 109 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (434)
T 4b4t_Q 109 DSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKL 188 (434)
T ss_dssp SCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHh
Confidence 456677777665432 346788888888888776666553 222 24677888999999
Q ss_pred CChHHHHHHHHhcC
Q psy11102 59 GLCEQAVYVFDKNK 72 (87)
Q Consensus 59 G~~~~Av~aylk~g 72 (87)
|..++|...|.++-
T Consensus 189 ~~~~~A~~~~~~al 202 (434)
T 4b4t_Q 189 RNLAKSKASLTAAR 202 (434)
T ss_dssp TCHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHH
Confidence 99999998887653
No 171
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=88.27 E-value=0.67 Score=28.46 Aligned_cols=59 Identities=17% Similarity=0.184 Sum_probs=37.3
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHhCCHHHHHHHHhhC---------------CCCCchHHHHHHHHHhCCChHHHHHHHH
Q psy11102 5 VSQAREYYEKCHCYEKLISVYTELGDFEALESCARKL---------------PDSSPLLKPMGEIFVKYGLCEQAVYVFD 69 (87)
Q Consensus 5 w~~A~~yY~~~~n~~k~ie~~~~~ed~d~L~~l~~~L---------------~~~~~lL~~ia~~F~~~G~~~~Av~ayl 69 (87)
|..-...|.+.|+++.++++|-+. .++.... |....++..+|.-+...|.++.|+..|.
T Consensus 14 ~~~~G~~~~~~~~~~~A~~~y~~a------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~ 87 (162)
T 3rkv_A 14 LRQKGNELFVQKDYKEAIDAYRDA------LTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSS 87 (162)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHH------HHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHH------HHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 444555666778889998887553 2222211 1123567778888888888888876543
No 172
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=88.02 E-value=1.8 Score=25.43 Aligned_cols=26 Identities=15% Similarity=0.154 Sum_probs=16.0
Q ss_pred chHHHHHHHHHhCCChHHHHHHHHhc
Q psy11102 46 PLLKPMGEIFVKYGLCEQAVYVFDKN 71 (87)
Q Consensus 46 ~lL~~ia~~F~~~G~~~~Av~aylk~ 71 (87)
.++..+|.-+...|..+.|+..|.++
T Consensus 47 ~i~~~L~~~~~~~g~~~~A~~~~~~a 72 (104)
T 2v5f_A 47 SVLDYLSYAVYQQGDLDKALLLTKKL 72 (104)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHH
Confidence 45566666666666666666665544
No 173
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=87.62 E-value=2.7 Score=29.58 Aligned_cols=25 Identities=12% Similarity=0.026 Sum_probs=21.3
Q ss_pred chHHHHHHHHHhCCChHHHHHHHHh
Q psy11102 46 PLLKPMGEIFVKYGLCEQAVYVFDK 70 (87)
Q Consensus 46 ~lL~~ia~~F~~~G~~~~Av~aylk 70 (87)
..+..+|..+...|..++|++.|.+
T Consensus 197 ~~~~nla~~~~~~g~~~~A~~~~~~ 221 (336)
T 1p5q_A 197 ASHLNLAMCHLKLQAFSAAIESCNK 221 (336)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 6788999999999999999876544
No 174
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=87.45 E-value=4.3 Score=26.30 Aligned_cols=68 Identities=21% Similarity=0.067 Sum_probs=38.4
Q ss_pred hHHHHHHHHHHhccH------HHHHHHHHH----hCCHHHHHHHHhhC-CCCC-----chHHHHHHHHHh----CCChHH
Q psy11102 4 LVSQAREYYEKCHCY------EKLISVYTE----LGDFEALESCARKL-PDSS-----PLLKPMGEIFVK----YGLCEQ 63 (87)
Q Consensus 4 ~w~~A~~yY~~~~n~------~k~ie~~~~----~ed~d~L~~l~~~L-~~~~-----~lL~~ia~~F~~----~G~~~~ 63 (87)
++++|.++|.++-+. -.+..+|.. .+|+++=.+..+.. ..++ +....+|.++.. .+..++
T Consensus 68 ~~~~A~~~~~~A~~~g~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~ 147 (212)
T 3rjv_A 68 DYPQARQLAEKAVEAGSKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVK 147 (212)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHH
Confidence 667777777766221 122333333 45665555544443 2233 456677777776 666777
Q ss_pred HHHHHHhc
Q psy11102 64 AVYVFDKN 71 (87)
Q Consensus 64 Av~aylk~ 71 (87)
|++.|.++
T Consensus 148 A~~~~~~A 155 (212)
T 3rjv_A 148 ASEYFKGS 155 (212)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77777765
No 175
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=87.31 E-value=2.6 Score=30.97 Aligned_cols=69 Identities=10% Similarity=0.041 Sum_probs=42.0
Q ss_pred hhHHHHHHHHHHhcc---------HHHHHHHHHHhCCHHHHHHHHh----hCCCCCchHHHHHHHHHhCCChHHHHHHHH
Q psy11102 3 TLVSQAREYYEKCHC---------YEKLISVYTELGDFEALESCAR----KLPDSSPLLKPMGEIFVKYGLCEQAVYVFD 69 (87)
Q Consensus 3 ~~w~~A~~yY~~~~n---------~~k~ie~~~~~ed~d~L~~l~~----~L~~~~~lL~~ia~~F~~~G~~~~Av~ayl 69 (87)
+++++|.++|.++-. ...+.-++...|+++.-..+.+ .-|++..+....+.++.+.|..+.|...|.
T Consensus 370 ~~~~~A~~~~~~Al~~~~~~~~~~~~~a~~~~~~~~~~~~A~~~~e~al~~~p~~~~~~~~~~~~~~~~g~~~~Ar~~~~ 449 (530)
T 2ooe_A 370 EGIKSGRMIFKKAREDARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFE 449 (530)
T ss_dssp HHHHHHHHHHHHHHTCTTCCTHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTTTCHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHcCChhHHHHHHHHHHHHCCCCHHHHHHHHHHHHhCCCHhhHHHHHH
Confidence 456666666666532 1111112334666665444433 336566778888888888888888888887
Q ss_pred hc
Q psy11102 70 KN 71 (87)
Q Consensus 70 k~ 71 (87)
++
T Consensus 450 ~a 451 (530)
T 2ooe_A 450 RV 451 (530)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 176
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=87.06 E-value=1.7 Score=29.90 Aligned_cols=67 Identities=6% Similarity=-0.012 Sum_probs=36.5
Q ss_pred hhHHHHHHHHHHhccH--------------HHHHHHHHHhCCHHHHHHHHhh-------CCCC-----CchHHHHHHHHH
Q psy11102 3 TLVSQAREYYEKCHCY--------------EKLISVYTELGDFEALESCARK-------LPDS-----SPLLKPMGEIFV 56 (87)
Q Consensus 3 ~~w~~A~~yY~~~~n~--------------~k~ie~~~~~ed~d~L~~l~~~-------L~~~-----~~lL~~ia~~F~ 56 (87)
++++.|.++|.++-.. ..+..++...|+|+.-....+. .+.. ...+..+|..+.
T Consensus 67 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~ 146 (373)
T 1hz4_A 67 GELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLW 146 (373)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHH
Confidence 4556666666554332 2345566677777655444332 2211 123445677777
Q ss_pred hCCChHHHHHHHH
Q psy11102 57 KYGLCEQAVYVFD 69 (87)
Q Consensus 57 ~~G~~~~Av~ayl 69 (87)
..|..++|...|.
T Consensus 147 ~~g~~~~A~~~~~ 159 (373)
T 1hz4_A 147 AWARLDEAEASAR 159 (373)
T ss_dssp HTTCHHHHHHHHH
T ss_pred HhcCHHHHHHHHH
Confidence 7777777766554
No 177
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=86.98 E-value=4.4 Score=29.40 Aligned_cols=25 Identities=8% Similarity=0.017 Sum_probs=11.9
Q ss_pred chHHHHHHHHHh----CCChHHHHHHHHh
Q psy11102 46 PLLKPMGEIFVK----YGLCEQAVYVFDK 70 (87)
Q Consensus 46 ~lL~~ia~~F~~----~G~~~~Av~aylk 70 (87)
.....+|.++.+ .+..+.|++.|.+
T Consensus 184 ~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~ 212 (490)
T 2xm6_A 184 WSCNQLGYMYSRGLGVERNDAISAQWYRK 212 (490)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCcCHHHHHHHHHH
Confidence 334444555444 4455555554443
No 178
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=86.15 E-value=1.8 Score=28.68 Aligned_cols=56 Identities=11% Similarity=0.089 Sum_probs=36.4
Q ss_pred HHHHHhccHHHHHHHHHHhCCHHHHHHHHhhCCC----CCc-----hHHHHHHHHHhCCChHHHHHHHHhc
Q psy11102 10 EYYEKCHCYEKLISVYTELGDFEALESCARKLPD----SSP-----LLKPMGEIFVKYGLCEQAVYVFDKN 71 (87)
Q Consensus 10 ~yY~~~~n~~k~ie~~~~~ed~d~L~~l~~~L~~----~~~-----lL~~ia~~F~~~G~~~~Av~aylk~ 71 (87)
.-+.+.|+++.++++|-+ -.++....|+ ++. .....|.-+.+.|.+++|+.+|-++
T Consensus 19 ~~l~~~g~~eeAi~~Y~k------AL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kA 83 (159)
T 2hr2_A 19 QRQLVAGEYDEAAANCRR------AMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKA 83 (159)
T ss_dssp HHHHHHTCHHHHHHHHHH------HHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHH------HHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 334456778888877643 2333333222 222 6778899999999999999988654
No 179
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=86.07 E-value=3.5 Score=28.13 Aligned_cols=49 Identities=8% Similarity=0.016 Sum_probs=29.8
Q ss_pred HHHHHhCCHHHHHHHHh----hCCCCCchHHHHHHHHHhCCChHHHHHHHHhc
Q psy11102 23 SVYTELGDFEALESCAR----KLPDSSPLLKPMGEIFVKYGLCEQAVYVFDKN 71 (87)
Q Consensus 23 e~~~~~ed~d~L~~l~~----~L~~~~~lL~~ia~~F~~~G~~~~Av~aylk~ 71 (87)
..+...|++++-+.+.+ .-|++...+..+|..+...|..++|++.|.+.
T Consensus 125 ~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~ 177 (287)
T 3qou_A 125 MQLMQESNYTDALPLLXDAWQLSNQNGEIGLLLAETLIALNRSEDAEAVLXTI 177 (287)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHTTCHHHHHHHHTTS
T ss_pred HHHHhCCCHHHHHHHHHHHHHhCCcchhHHHHHHHHHHHCCCHHHHHHHHHhC
Confidence 33444444444333333 33555567777788788888888887777665
No 180
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=85.91 E-value=1.7 Score=24.90 Aligned_cols=38 Identities=16% Similarity=0.151 Sum_probs=29.4
Q ss_pred HHHHHHhhCCCCCchHHHHHHHHHhCCChHHHHHHHHh
Q psy11102 33 ALESCARKLPDSSPLLKPMGEIFVKYGLCEQAVYVFDK 70 (87)
Q Consensus 33 ~L~~l~~~L~~~~~lL~~ia~~F~~~G~~~~Av~aylk 70 (87)
.+++.++.-|++...+..+|..+...|..++|+..|.+
T Consensus 7 ~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~ 44 (115)
T 2kat_A 7 RLEAMLAQGTDNMLLRFTLGKTYAEHEQFDAALPHLRA 44 (115)
T ss_dssp HHHHHHTTTCCCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHhCCCcHHHHHHHHHHHHHccCHHHHHHHHHH
Confidence 44555555566668889999999999999999887654
No 181
>2pm7_A Protein WEB1, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm6_A 3mzl_B
Probab=85.22 E-value=2.7 Score=31.68 Aligned_cols=39 Identities=5% Similarity=0.086 Sum_probs=34.9
Q ss_pred CchHHHHHHHHHhCCChHHHHHHHHhcCCHHHHHHHHhh
Q psy11102 45 SPLLKPMGEIFVKYGLCEQAVYVFDKNKHKSSQWLTVVQ 83 (87)
Q Consensus 45 ~~lL~~ia~~F~~~G~~~~Av~aylk~gd~k~ai~~cv~ 83 (87)
..+...+|+.+...|..+.|.-||+=+|++.+.+..-.+
T Consensus 248 ~~Lc~~LG~RL~~~g~~~~A~lCYi~Ag~~dk~v~iW~~ 286 (399)
T 2pm7_A 248 NEMMIKLGDRMKENGHRQDSLTLYLAAGSLDKVASIWLS 286 (399)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCChhhhhHHHHhhCCHHHHHHHHHH
Confidence 467789999999999999999999999999999887544
No 182
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=85.06 E-value=2.4 Score=30.52 Aligned_cols=70 Identities=10% Similarity=-0.041 Sum_probs=52.7
Q ss_pred chhHHHHHHHHHHhccH----------HHHHHHHHHhCCHHHHHHHHhhCCC-CC-c-----hHHHHHHHHHhCCChHHH
Q psy11102 2 TTLVSQAREYYEKCHCY----------EKLISVYTELGDFEALESCARKLPD-SS-P-----LLKPMGEIFVKYGLCEQA 64 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n~----------~k~ie~~~~~ed~d~L~~l~~~L~~-~~-~-----lL~~ia~~F~~~G~~~~A 64 (87)
.++|+.|..+|.++... -.+-.++..+|+|++-.+.-+.... .. | .+-..|.-+...|..++|
T Consensus 148 ~~r~~dA~~~l~~a~~~~d~~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~deA 227 (282)
T 4f3v_A 148 AERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGNESAA 227 (282)
T ss_dssp TTCHHHHHHHHTTGGGCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHHHH
T ss_pred cCCHHHHHHHHHHhhccCCcccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCCHHHH
Confidence 47899999999888753 2344577789999887766665433 22 2 467889999999999999
Q ss_pred HHHHHhc
Q psy11102 65 VYVFDKN 71 (87)
Q Consensus 65 v~aylk~ 71 (87)
+..|-+.
T Consensus 228 ~~~l~~a 234 (282)
T 4f3v_A 228 VALLEWL 234 (282)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998764
No 183
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=84.34 E-value=3 Score=30.38 Aligned_cols=69 Identities=9% Similarity=0.063 Sum_probs=48.3
Q ss_pred chhHHHHHHHHHHh-------ccHH---HHHHHHHHhCCHHHHHHHHhhC---CC-----CCchHHHHHH----HHHhCC
Q psy11102 2 TTLVSQAREYYEKC-------HCYE---KLISVYTELGDFEALESCARKL---PD-----SSPLLKPMGE----IFVKYG 59 (87)
Q Consensus 2 ~~~w~~A~~yY~~~-------~n~~---k~ie~~~~~ed~d~L~~l~~~L---~~-----~~~lL~~ia~----~F~~~G 59 (87)
.+++++|.+++.++ ++.+ .+++++.+.|..|.-.++.+.+ ++ ++..+..+++ .....+
T Consensus 113 ~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~d~~~~~d~~l~~Laea~v~l~~g~~ 192 (310)
T 3mv2_B 113 LGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNYTNAIEDTVSGDNEMILNLAESYIKFATNKE 192 (310)
T ss_dssp HTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred cCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCccccccchHHHHHHHHHHHHHHhCCc
Confidence 47899999999998 5554 6789999999999988877554 43 2455666653 333344
Q ss_pred ChHHHHHHHHh
Q psy11102 60 LCEQAVYVFDK 70 (87)
Q Consensus 60 ~~~~Av~aylk 70 (87)
..++|...|-.
T Consensus 193 ~~q~A~~~f~E 203 (310)
T 3mv2_B 193 TATSNFYYYEE 203 (310)
T ss_dssp TTTHHHHHHHH
T ss_pred cHHHHHHHHHH
Confidence 77777666643
No 184
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=84.07 E-value=1.6 Score=28.91 Aligned_cols=30 Identities=13% Similarity=0.328 Sum_probs=24.0
Q ss_pred CCCCchHHHHHHHHHhCC-----------ChHHHHHHHHhc
Q psy11102 42 PDSSPLLKPMGEIFVKYG-----------LCEQAVYVFDKN 71 (87)
Q Consensus 42 ~~~~~lL~~ia~~F~~~G-----------~~~~Av~aylk~ 71 (87)
|+....+-.+|.-+.+.| ..++|+++|.|+
T Consensus 77 P~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kA 117 (158)
T 1zu2_A 77 PKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQA 117 (158)
T ss_dssp TTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHH
Confidence 566778888999998875 889999888764
No 185
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=83.38 E-value=9.9 Score=32.05 Aligned_cols=78 Identities=10% Similarity=-0.009 Sum_probs=63.2
Q ss_pred HHHHHHHHHhccHHHHHHHHHHhCCHHHHHHHHhh-----------------------CCCC----CchHHHHHHHHHhC
Q psy11102 6 SQAREYYEKCHCYEKLISVYTELGDFEALESCARK-----------------------LPDS----SPLLKPMGEIFVKY 58 (87)
Q Consensus 6 ~~A~~yY~~~~n~~k~ie~~~~~ed~d~L~~l~~~-----------------------L~~~----~~lL~~ia~~F~~~ 58 (87)
+.=+++..+.+.+..|+.++.+.+..|.|++.+++ ++.. ..+|.-+-+.|.+.
T Consensus 149 ~~iv~~cl~hnae~~AvdLalE~erLD~Le~~vd~~~~~~~~~n~~rvclYlls~v~~lv~p~~fr~~vLr~l~~Iy~k~ 228 (963)
T 4ady_A 149 ERMIEKCLKASELKLALGIALEGYRLDIIESALKSKLDQDSTSENVKIINYLLTLAITTVTNSKFRSSILRKSFDFLMNM 228 (963)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHhhHHHHHHHHHhhccccccccHHHHHHHHHHHhhccCCChHHHHHHHHHHHHHHHhC
Confidence 34456777888889999999999999999988876 3442 37888888889998
Q ss_pred C--ChHHHHHHHHhcCCHHHHHHHHhh
Q psy11102 59 G--LCEQAVYVFDKNKHKSSQWLTVVQ 83 (87)
Q Consensus 59 G--~~~~Av~aylk~gd~k~ai~~cv~ 83 (87)
. .+.+|.++.++.||+..+.++.-+
T Consensus 229 ~~~dy~~a~~~ai~LnD~~li~~if~~ 255 (963)
T 4ady_A 229 PNCDYLTLNKVVVNLNDAGLALQLFKK 255 (963)
T ss_dssp SSCCHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHcCCHHHHHHHHHH
Confidence 8 788999999999999988776554
No 186
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=83.03 E-value=7.1 Score=28.29 Aligned_cols=24 Identities=17% Similarity=0.123 Sum_probs=11.0
Q ss_pred hHHHHHHHHHh----CCChHHHHHHHHh
Q psy11102 47 LLKPMGEIFVK----YGLCEQAVYVFDK 70 (87)
Q Consensus 47 lL~~ia~~F~~----~G~~~~Av~aylk 70 (87)
.+..+|..+.. .+..+.|++.|.+
T Consensus 149 a~~~Lg~~y~~g~g~~~d~~~A~~~~~~ 176 (490)
T 2xm6_A 149 GQQSMGDAYFEGDGVTRDYVMAREWYSK 176 (490)
T ss_dssp HHHHHHHHHHHTSSSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCCCHHHHHHHHHH
Confidence 34444444444 3444455444443
No 187
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=82.64 E-value=2.3 Score=31.07 Aligned_cols=50 Identities=6% Similarity=-0.060 Sum_probs=29.2
Q ss_pred HHHHHHHhCC-HHHHHHHHhh----CCCCCchHHHHHHHHHhCCChHHHHHHHHh
Q psy11102 21 LISVYTELGD-FEALESCARK----LPDSSPLLKPMGEIFVKYGLCEQAVYVFDK 70 (87)
Q Consensus 21 ~ie~~~~~ed-~d~L~~l~~~----L~~~~~lL~~ia~~F~~~G~~~~Av~aylk 70 (87)
...++..+|. +++-....+. =|++.......|..+...|..++|+..|.|
T Consensus 137 ~g~~l~~~g~d~~eAl~~~~~al~l~P~~~~a~~~~g~~~~~~g~~~eAl~~~~k 191 (382)
T 2h6f_A 137 RRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRDPSQELEFIAD 191 (382)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCCTTHHHHHHH
T ss_pred HHHHHHHcccCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCHHHHHHHHHH
Confidence 3445556664 6554433333 244456677777777777777777766654
No 188
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=81.82 E-value=15 Score=27.80 Aligned_cols=81 Identities=12% Similarity=0.055 Sum_probs=44.9
Q ss_pred hHHHHHHHHHHhc---------cHHHHHHHHHHhCCHHHHHHHHhhCCC-C----CchHHHHHHHHHhCCChHHHHH---
Q psy11102 4 LVSQAREYYEKCH---------CYEKLISVYTELGDFEALESCARKLPD-S----SPLLKPMGEIFVKYGLCEQAVY--- 66 (87)
Q Consensus 4 ~w~~A~~yY~~~~---------n~~k~ie~~~~~ed~d~L~~l~~~L~~-~----~~lL~~ia~~F~~~G~~~~Av~--- 66 (87)
..+.|.++|..-. -+.-+|..|.+.|+++.-.++.+.+.+ + ..-...+-..|.+.|..+.|.+
T Consensus 85 ~l~~A~~lf~~M~~~G~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~ 164 (501)
T 4g26_A 85 GLSRGFDIFKQMIVDKVVPNEATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVDA 164 (501)
T ss_dssp HHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHHH
Confidence 4556666665321 145677777777777776666665432 1 1223344445555666555544
Q ss_pred -------------------HHHhcCCHHHHHHHHhhc
Q psy11102 67 -------------------VFDKNKHKSSQWLTVVQD 84 (87)
Q Consensus 67 -------------------aylk~gd~k~ai~~cv~~ 84 (87)
+|.+.|+++.|.++.-++
T Consensus 165 ~M~~~G~~Pd~~ty~~Li~~~~~~g~~d~A~~ll~~M 201 (501)
T 4g26_A 165 HMVESEVVPEEPELAALLKVSMDTKNADKVYKTLQRL 201 (501)
T ss_dssp HHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHhcCCCCCHHHHHHHHHHHhhCCCHHHHHHHHHHH
Confidence 445566666666665544
No 189
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=80.87 E-value=2.6 Score=27.33 Aligned_cols=68 Identities=12% Similarity=0.107 Sum_probs=35.2
Q ss_pred hhHHHHHHHHHHhccH------HHHHHHHHHhC----CHHHHHHHHhh-CCCC-CchHHHHHHHHHh----CCChHHHHH
Q psy11102 3 TLVSQAREYYEKCHCY------EKLISVYTELG----DFEALESCARK-LPDS-SPLLKPMGEIFVK----YGLCEQAVY 66 (87)
Q Consensus 3 ~~w~~A~~yY~~~~n~------~k~ie~~~~~e----d~d~L~~l~~~-L~~~-~~lL~~ia~~F~~----~G~~~~Av~ 66 (87)
+++++|.++|.++-+. -.+..+|.. + |+++-.+..+. +..+ ......+|.++.. .+..++|++
T Consensus 32 ~~~~~A~~~~~~a~~~g~~~a~~~lg~~y~~-~g~~~~~~~A~~~~~~A~~~g~~~a~~~Lg~~y~~g~g~~~d~~~A~~ 110 (212)
T 3rjv_A 32 GDYQKAEYWAQKAAAQGDGDALALLAQLKIR-NPQQADYPQARQLAEKAVEAGSKSGEIVLARVLVNRQAGATDVAHAIT 110 (212)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHTTS-STTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTCGGGSSCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHc-CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHcCCCCccCHHHHHH
Confidence 4566666666665221 112222222 3 45444433333 2223 3556677777766 667777777
Q ss_pred HHHhc
Q psy11102 67 VFDKN 71 (87)
Q Consensus 67 aylk~ 71 (87)
.|.++
T Consensus 111 ~~~~A 115 (212)
T 3rjv_A 111 LLQDA 115 (212)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77664
No 190
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=80.60 E-value=1.4 Score=33.63 Aligned_cols=70 Identities=13% Similarity=0.065 Sum_probs=51.0
Q ss_pred chhHHHHHHHHHHhcc----------------HHHHHHHHHHhCCHHHHHHHHh--------hCCCCCchHHH----HHH
Q psy11102 2 TTLVSQAREYYEKCHC----------------YEKLISVYTELGDFEALESCAR--------KLPDSSPLLKP----MGE 53 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n----------------~~k~ie~~~~~ed~d~L~~l~~--------~L~~~~~lL~~----ia~ 53 (87)
.|+|++|..||.++=. +..+...|...|+|++-+.+.+ .|.++||...+ ++.
T Consensus 364 ~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~ 443 (490)
T 3n71_A 364 LQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQ 443 (490)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHH
Confidence 4789999999988643 3467888999999988766543 35677766554 445
Q ss_pred HHHhCCChHHHHHHHHhc
Q psy11102 54 IFVKYGLCEQAVYVFDKN 71 (87)
Q Consensus 54 ~F~~~G~~~~Av~aylk~ 71 (87)
-....|+.++|-..|-++
T Consensus 444 ~~~e~~~~~~ae~~~~~~ 461 (490)
T 3n71_A 444 TEMELRMFRQNEFMYHKM 461 (490)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 556677888888888775
No 191
>2vvy_A Protein B15, B14; IKK, IKK beta, BCL-2 family, early protein, HOST-virus interaction, viral protein, immunomodulator, NF-KB activation; 2.69A {Vaccinia virus}
Probab=80.16 E-value=1.7 Score=29.65 Aligned_cols=60 Identities=17% Similarity=0.185 Sum_probs=45.0
Q ss_pred HHHHHHHHHhccHHHHHHHHHHhCCHHHHHHHHhhCCCC-CchHHHHHHHHHhCCChHHHHHHHHhcC
Q psy11102 6 SQAREYYEKCHCYEKLISVYTELGDFEALESCARKLPDS-SPLLKPMGEIFVKYGLCEQAVYVFDKNK 72 (87)
Q Consensus 6 ~~A~~yY~~~~n~~k~ie~~~~~ed~d~L~~l~~~L~~~-~~lL~~ia~~F~~~G~~~~Av~aylk~g 72 (87)
..|..+| ||+..+..++.. ..+|.+.++++.+... .+.++ +-++-.|+|..+++-.=+-+
T Consensus 79 ~DA~~~F---gni~~lv~~l~l-~g~dn~~~fI~~~~~~~qn~i~---e~~aiIGLcA~vaeyWG~~~ 139 (169)
T 2vvy_A 79 DDAELVF---IDIRELVKNMPW-DDVKDCAEIIRCYIPDEQKTIR---EISAIIGLCAYAATYWGGED 139 (169)
T ss_dssp HHHHHHH---SCHHHHHHHSCT-TCHHHHHHHHHHHSCCSSCCHH---HHHHHHHHHHHHHHHHCCSS
T ss_pred HHHHHHh---ccHHHHHHHhhh-hhhhhHHHHHHHHhhhhHHHHH---HHHHHHHHHHHHHHHHCCCC
Confidence 3577777 999988888877 8899999999986554 44443 56677899999988655444
No 192
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=78.93 E-value=4.4 Score=24.81 Aligned_cols=72 Identities=17% Similarity=0.111 Sum_probs=47.1
Q ss_pred chhHHHHHH---HHHHh-----ccHHHHHHHHHHhCCHHHHHHHHhhC-C------C--C-CchHHHHHHHHHhCCChHH
Q psy11102 2 TTLVSQARE---YYEKC-----HCYEKLISVYTELGDFEALESCARKL-P------D--S-SPLLKPMGEIFVKYGLCEQ 63 (87)
Q Consensus 2 ~~~w~~A~~---yY~~~-----~n~~k~ie~~~~~ed~d~L~~l~~~L-~------~--~-~~lL~~ia~~F~~~G~~~~ 63 (87)
.+++++|.+ ++... .-+..+..++...|+|+.-....+.. . . . ...+..+|..+...|..++
T Consensus 5 ~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~ 84 (203)
T 3gw4_A 5 AHDYALAERQAQALLAHPATASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAGNWDA 84 (203)
T ss_dssp --CHHHHHHHHHHHHTSTTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred cccHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcCCHHH
Confidence 467888888 66432 22345667888899998766665542 1 2 1 1457778888888888888
Q ss_pred HHHHHHhcCC
Q psy11102 64 AVYVFDKNKH 73 (87)
Q Consensus 64 Av~aylk~gd 73 (87)
|.+.|.++=+
T Consensus 85 A~~~~~~al~ 94 (203)
T 3gw4_A 85 ARRCFLEERE 94 (203)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888766543
No 193
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=78.00 E-value=14 Score=25.22 Aligned_cols=70 Identities=14% Similarity=0.116 Sum_probs=46.3
Q ss_pred chhHHHHHHHHHHhccHH---------------HHHHHHHHhCCHHHHHHHHhhCCC-C--C-c----hHHHHHHHHHhC
Q psy11102 2 TTLVSQAREYYEKCHCYE---------------KLISVYTELGDFEALESCARKLPD-S--S-P----LLKPMGEIFVKY 58 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n~~---------------k~ie~~~~~ed~d~L~~l~~~L~~-~--~-~----lL~~ia~~F~~~ 58 (87)
.+++++|..+|.++-... -.+.++...|+++.-....+..-+ . . . .+..+|..+...
T Consensus 187 ~g~~~~A~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~ 266 (373)
T 1hz4_A 187 RGDLDNARSQLNRLENLLGNGKYHSDWISNANKVRVIYWQMTGDKAAAANWLRHTAKPEFANNHFLQGQWRNIARAQILL 266 (373)
T ss_dssp HTCHHHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHSCCCCCTTCGGGHHHHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHCCCHHHHHHHHHhCCCCCCCcchhhHHHHHHHHHHHHHc
Confidence 367888888887764321 123446788999988887776533 1 1 1 245678888888
Q ss_pred CChHHHHHHHHhc
Q psy11102 59 GLCEQAVYVFDKN 71 (87)
Q Consensus 59 G~~~~Av~aylk~ 71 (87)
|..++|++.+.++
T Consensus 267 g~~~~A~~~l~~a 279 (373)
T 1hz4_A 267 GEFEPAEIVLEEL 279 (373)
T ss_dssp TCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHH
Confidence 8888887766543
No 194
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=77.48 E-value=9.4 Score=27.95 Aligned_cols=36 Identities=17% Similarity=0.168 Sum_probs=24.1
Q ss_pred HHHhhCCCCCchHHHHHHHHHhCCChHHHHHHHHhc
Q psy11102 36 SCARKLPDSSPLLKPMGEIFVKYGLCEQAVYVFDKN 71 (87)
Q Consensus 36 ~l~~~L~~~~~lL~~ia~~F~~~G~~~~Av~aylk~ 71 (87)
+.+...|.+.++....|.+..+.|..+.|.+.|.|+
T Consensus 37 ~al~~~P~~~~~w~~~~~~~~~~~~~~~a~~~~~ra 72 (530)
T 2ooe_A 37 RLVAQFPSSGRFWKLYIEAEIKAKNYDKVEKLFQRC 72 (530)
T ss_dssp HHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 334445666667777777777777777777777664
No 195
>3mzk_B Protein transport protein SEC16; alpha-helical-stack, beta-propeller; 2.69A {Saccharomyces cerevisiae}
Probab=77.21 E-value=10 Score=29.00 Aligned_cols=61 Identities=15% Similarity=0.127 Sum_probs=44.4
Q ss_pred HHhccHHHHHHHHH--------Hh-CCHHHHHHHHhhCCCCC-----------chHHHHHHHHHhCCChHHHHHHHHhcC
Q psy11102 13 EKCHCYEKLISVYT--------EL-GDFEALESCARKLPDSS-----------PLLKPMGEIFVKYGLCEQAVYVFDKNK 72 (87)
Q Consensus 13 ~~~~n~~k~ie~~~--------~~-ed~d~L~~l~~~L~~~~-----------~lL~~ia~~F~~~G~~~~Av~aylk~g 72 (87)
.-+||...+++.++ .+ .|-+-|.-|+.....++ +.|..+|+.+.+.|..+.|--||+=+|
T Consensus 226 v~sGn~~~~V~~l~~~~~~~~~~l~~Wre~lA~IlsN~~~~~~~~~~~p~~~~~~l~~LGd~L~~~g~~~aAhiCYL~a~ 305 (441)
T 3mzk_B 226 VFVGNSKMAIKSFYTNNETSQWASENWKSIVAAVLINIPENNEDPLLIPPVVLEFLIEFGIFLTKKGLTAAASTLFIIGN 305 (441)
T ss_dssp HTTTCHHHHHHHHHHCHHHHHHHHHSHHHHHHHHHHTSCCCSSCTTCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHTT
T ss_pred HHcCCHHHHHHHhccCCccccchHhHHHHHHHHHHhCCCCchhhcccccchHHHHHHHHHHHHHhCCCcchhHHhHhccC
Confidence 34688888888762 23 44444555555554322 489999999999999999999999887
Q ss_pred C
Q psy11102 73 H 73 (87)
Q Consensus 73 d 73 (87)
-
T Consensus 306 ~ 306 (441)
T 3mzk_B 306 V 306 (441)
T ss_dssp C
T ss_pred C
Confidence 5
No 196
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=77.17 E-value=5.7 Score=23.19 Aligned_cols=30 Identities=10% Similarity=-0.037 Sum_probs=26.1
Q ss_pred CCCCchHHHHHHHHHhCCChHHHHHHHHhc
Q psy11102 42 PDSSPLLKPMGEIFVKYGLCEQAVYVFDKN 71 (87)
Q Consensus 42 ~~~~~lL~~ia~~F~~~G~~~~Av~aylk~ 71 (87)
|++..-+..+|......|.+++|+..|.+.
T Consensus 40 p~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~ 69 (93)
T 3bee_A 40 PYNEAALSLIANDHFISFRFQEAIDTWVLL 69 (93)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 555688889999999999999999999874
No 197
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=76.93 E-value=9.5 Score=25.85 Aligned_cols=51 Identities=18% Similarity=0.290 Sum_probs=36.2
Q ss_pred HHHHHHHHhCCHHHHHHHHhh-CCCC---CchHHHHHHHHHhCCChHHHHHHHHh
Q psy11102 20 KLISVYTELGDFEALESCARK-LPDS---SPLLKPMGEIFVKYGLCEQAVYVFDK 70 (87)
Q Consensus 20 k~ie~~~~~ed~d~L~~l~~~-L~~~---~~lL~~ia~~F~~~G~~~~Av~aylk 70 (87)
.|++.+...+--|.|+++.+. |..+ .++|-+||.-+.+.|.--.|-+...+
T Consensus 96 ~ALd~lv~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~ 150 (172)
T 1wy6_A 96 KALDILVIQGKRDKLEEIGREILKNNEVSASILVAIANALRRVGDERDATTLLIE 150 (172)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHhccHhHHHHHHHHHhccCCCChHHHHHHHHHHHHhcchhhHHHHHHH
Confidence 344444456778899999999 4443 48899999988888888777766544
No 198
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=76.41 E-value=6.9 Score=28.75 Aligned_cols=25 Identities=20% Similarity=0.211 Sum_probs=20.2
Q ss_pred chHHHHHHHHHhCCChHHHHHHHHh
Q psy11102 46 PLLKPMGEIFVKYGLCEQAVYVFDK 70 (87)
Q Consensus 46 ~lL~~ia~~F~~~G~~~~Av~aylk 70 (87)
..+..+|..+...|.+++|+..|.+
T Consensus 318 ~~~~nla~~~~~~g~~~~A~~~~~~ 342 (457)
T 1kt0_A 318 AAFLNLAMCYLKLREYTKAVECCDK 342 (457)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 6777889999999999999865543
No 199
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=76.16 E-value=12 Score=28.32 Aligned_cols=71 Identities=8% Similarity=0.117 Sum_probs=54.6
Q ss_pred chhHHHHHHHHHHhc---------cHHHHHHHHHHhCCHHHHHHHHhhCCC-----CCchHHHHHHHHHhCCChHHHHHH
Q psy11102 2 TTLVSQAREYYEKCH---------CYEKLISVYTELGDFEALESCARKLPD-----SSPLLKPMGEIFVKYGLCEQAVYV 67 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~---------n~~k~ie~~~~~ed~d~L~~l~~~L~~-----~~~lL~~ia~~F~~~G~~~~Av~a 67 (87)
.+++++|.++|..-. -+.-+|..|.+.|+++.-.++.+.+.+ +......+-..+.+.|..+.|.+.
T Consensus 118 ~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~~ty~~Li~~~~~~g~~d~A~~l 197 (501)
T 4g26_A 118 KDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPEEPELAALLKVSMDTKNADKVYKT 197 (501)
T ss_dssp HTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHhhCCCHHHHHHH
Confidence 467888888886432 356788999999999998888877533 234567778888999999999999
Q ss_pred HHhcC
Q psy11102 68 FDKNK 72 (87)
Q Consensus 68 ylk~g 72 (87)
|-+..
T Consensus 198 l~~Mr 202 (501)
T 4g26_A 198 LQRLR 202 (501)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98764
No 200
>2pm7_A Protein WEB1, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm6_A 3mzl_B
Probab=76.02 E-value=3.8 Score=30.90 Aligned_cols=69 Identities=12% Similarity=0.122 Sum_probs=47.4
Q ss_pred hhHHHHHHHHHHhccHHHHHHHHHH-hCCH----------------HHHHHHHh-------hCCC----C----CchHHH
Q psy11102 3 TLVSQAREYYEKCHCYEKLISVYTE-LGDF----------------EALESCAR-------KLPD----S----SPLLKP 50 (87)
Q Consensus 3 ~~w~~A~~yY~~~~n~~k~ie~~~~-~ed~----------------d~L~~l~~-------~L~~----~----~~lL~~ 50 (87)
++...|.--|.-+||++|.++|... +.+. ..|.+++. .+.. . ...+.+
T Consensus 262 g~~~~A~lCYi~Ag~~dk~v~iW~~~~~~~~~~~~~~~~s~~~~~~~~Lqe~iEkv~vl~~a~~~~~~~~~~~l~~~~~e 341 (399)
T 2pm7_A 262 GHRQDSLTLYLAAGSLDKVASIWLSEFPDLEDKLKKDNKTIYEAHSECMTEFIERFTVFSNFINGSSTINNEQLIAKFLE 341 (399)
T ss_dssp TCHHHHHHHHHHHTCHHHHHHHHHHSHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTSCC---CCCHHHHHHHHH
T ss_pred CChhhhhHHHHhhCCHHHHHHHHHHhcchhhhccccccCCcccccHHHHHHHHHHHHHHHHHHhcCCCcCcHHHHHHHHH
Confidence 5678899999999999999999865 2221 23444333 2221 1 134567
Q ss_pred HHHHHHhCCChHHHHHHHHhc
Q psy11102 51 MGEIFVKYGLCEQAVYVFDKN 71 (87)
Q Consensus 51 ia~~F~~~G~~~~Av~aylk~ 71 (87)
-|+.+++.|+.+.|.+-.--.
T Consensus 342 YA~lLA~qG~l~~A~~yL~~l 362 (399)
T 2pm7_A 342 FINLTTSTGNFELATEFLNSL 362 (399)
T ss_dssp HHHHHHTTTCHHHHHHHHHHS
T ss_pred HHHHHHhCCCHHHHHHHHHhC
Confidence 788999999999999866543
No 201
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=75.51 E-value=4.2 Score=29.28 Aligned_cols=64 Identities=19% Similarity=0.134 Sum_probs=36.1
Q ss_pred HHHHHHHHHHhccHHHHHHHHHHhCCHHHH-------HHHHhhCCC-CCchHHHHHHHHHhCCChHHHHHHHH
Q psy11102 5 VSQAREYYEKCHCYEKLISVYTELGDFEAL-------ESCARKLPD-SSPLLKPMGEIFVKYGLCEQAVYVFD 69 (87)
Q Consensus 5 w~~A~~yY~~~~n~~k~ie~~~~~ed~d~L-------~~l~~~L~~-~~~lL~~ia~~F~~~G~~~~Av~ayl 69 (87)
|..-+..|.+.|++++|+++|-+.=.+..- ++.. .+.. ....+..+|..+...|..++|++.|.
T Consensus 226 ~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~-~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~ 297 (370)
T 1ihg_A 226 LKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGA-KLQPVALSCVLNIGACKLKMSDWQGAVDSCL 297 (370)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHG-GGHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHH-HHHHHHHHHHHHHHHHHHhccCHHHHHHHHH
Confidence 334445555667777777766433211000 0000 0222 34677888999999999998886553
No 202
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=75.43 E-value=4.5 Score=30.12 Aligned_cols=50 Identities=16% Similarity=0.170 Sum_probs=35.6
Q ss_pred HHHhccHHHHHHHHHHhCCHHHHHHHHhhCCCCCchHHHHHHHHHhCCChHHHHHHHHh
Q psy11102 12 YEKCHCYEKLISVYTELGDFEALESCARKLPDSSPLLKPMGEIFVKYGLCEQAVYVFDK 70 (87)
Q Consensus 12 Y~~~~n~~k~ie~~~~~ed~d~L~~l~~~L~~~~~lL~~ia~~F~~~G~~~~Av~aylk 70 (87)
|.+.|++++|+++|-+. ++.-|++...+..+|..+...|..++|++.|.+
T Consensus 16 ~~~~g~~~~A~~~~~~A---------l~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~ 65 (477)
T 1wao_1 16 YFKAKDYENAIKFYSQA---------IELNPSNAIYYGNRSLAYLRTECYGYALGDATR 65 (477)
T ss_dssp TTTTTCHHHHHHHHHHH---------HHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHhCCHHHHHHHHHHH---------HHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence 44556777777665432 223455678899999999999999999876543
No 203
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=75.33 E-value=3.8 Score=28.84 Aligned_cols=69 Identities=13% Similarity=0.133 Sum_probs=30.7
Q ss_pred chhHHHHHHHHHHh-----cc---HHHHHHHHHHhCCHHHHHHHHhhC----CCCCchHHHHHHH-HHhCCChHHHHHHH
Q psy11102 2 TTLVSQAREYYEKC-----HC---YEKLISVYTELGDFEALESCARKL----PDSSPLLKPMGEI-FVKYGLCEQAVYVF 68 (87)
Q Consensus 2 ~~~w~~A~~yY~~~-----~n---~~k~ie~~~~~ed~d~L~~l~~~L----~~~~~lL~~ia~~-F~~~G~~~~Av~ay 68 (87)
.++|++|..+|.++ .+ +-.+..+|..+++|+.-....+.. |.+......++.. -...+..+.|...|
T Consensus 243 ~g~~~~A~~~~~~al~~~p~~~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p~~~~a~~~L~~l~~~~~~~~~~a~~~~ 322 (338)
T 2if4_A 243 LKRYDEAIGHCNIVLTEEEKNPKALFRRGKAKAELGQMDSARDDFRKAQKYAPDDKAIRRELRALAEQEKALYQKQKEMY 322 (338)
T ss_dssp TTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHTTC------------------------------
T ss_pred cCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47889999999887 22 346778899999999877776664 3333444444444 23445556666666
Q ss_pred Hh
Q psy11102 69 DK 70 (87)
Q Consensus 69 lk 70 (87)
-+
T Consensus 323 ~~ 324 (338)
T 2if4_A 323 KG 324 (338)
T ss_dssp --
T ss_pred HH
Confidence 44
No 204
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=73.61 E-value=12 Score=27.22 Aligned_cols=53 Identities=4% Similarity=-0.027 Sum_probs=35.7
Q ss_pred HHHHHHhccHHHHHHHHHHhCCHHHHHHHHhhCCCCCchHHHHHHHHHhCCC-hHHHHHHHHh
Q psy11102 9 REYYEKCHCYEKLISVYTELGDFEALESCARKLPDSSPLLKPMGEIFVKYGL-CEQAVYVFDK 70 (87)
Q Consensus 9 ~~yY~~~~n~~k~ie~~~~~ed~d~L~~l~~~L~~~~~lL~~ia~~F~~~G~-~~~Av~aylk 70 (87)
...|.+.|+++++++++- +.+..-|++.......|..+...|. .++|+..|.+
T Consensus 104 g~~~~~~g~~~~Al~~~~---------~al~l~P~~~~a~~~~g~~l~~~g~d~~eAl~~~~~ 157 (382)
T 2h6f_A 104 RAVLQRDERSERAFKLTR---------DAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITA 157 (382)
T ss_dssp HHHHHHTCCCHHHHHHHH---------HHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred HHHHHHCCChHHHHHHHH---------HHHHhCccCHHHHHHHHHHHHHcccCHHHHHHHHHH
Confidence 344455555555555432 2333346667889999999999997 9999887754
No 205
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=72.61 E-value=0.61 Score=27.27 Aligned_cols=27 Identities=19% Similarity=0.209 Sum_probs=22.8
Q ss_pred CCchHHHHHHHHHhCCChHHHHHHHHh
Q psy11102 44 SSPLLKPMGEIFVKYGLCEQAVYVFDK 70 (87)
Q Consensus 44 ~~~lL~~ia~~F~~~G~~~~Av~aylk 70 (87)
....+..+|..+...|.+++|++.|.+
T Consensus 26 ~~~~~~~lg~~~~~~~~~~~A~~~~~~ 52 (117)
T 3k9i_A 26 LAECYLGLGSTFRTLGEYRKAEAVLAN 52 (117)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 457788999999999999999987754
No 206
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=71.90 E-value=10 Score=28.36 Aligned_cols=55 Identities=18% Similarity=0.125 Sum_probs=40.9
Q ss_pred chhHHHHHHHHHHhcc----------------HHHHHHHHHHhCCHHHHHHHHh--------hCCCCCchHHHHHHHHH
Q psy11102 2 TTLVSQAREYYEKCHC----------------YEKLISVYTELGDFEALESCAR--------KLPDSSPLLKPMGEIFV 56 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n----------------~~k~ie~~~~~ed~d~L~~l~~--------~L~~~~~lL~~ia~~F~ 56 (87)
.|+|++|..||.++=. +.++...|...|+|++-+.+.+ .+.++||...++-..+.
T Consensus 353 ~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~l~~~l~ 431 (433)
T 3qww_A 353 MQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIMEVAHGKDHPYISEIKQEIE 431 (433)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHh
Confidence 4789999999988643 3457788889999988776544 45777888877766544
No 207
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=71.50 E-value=4.1 Score=23.13 Aligned_cols=53 Identities=8% Similarity=-0.022 Sum_probs=27.8
Q ss_pred HHHHHHHhCCHHHHHHHHhhCCCCCchHHHHHHHHHhCCChHHHHHHHHhcCCHHHHHHHHh
Q psy11102 21 LISVYTELGDFEALESCARKLPDSSPLLKPMGEIFVKYGLCEQAVYVFDKNKHKSSQWLTVV 82 (87)
Q Consensus 21 ~ie~~~~~ed~d~L~~l~~~L~~~~~lL~~ia~~F~~~G~~~~Av~aylk~gd~k~ai~~cv 82 (87)
+..+|+..|+|+.-.+..+..-+-+|--.. ..-.--.+|.+.|+++.|+...-
T Consensus 13 lg~~~~~~g~~~~A~~~~~~al~~~p~~~~---------a~~~lg~~~~~~g~~~~A~~~~~ 65 (100)
T 3ma5_A 13 LAQEHLKHDNASRALALFEELVETDPDYVG---------TYYHLGKLYERLDRTDDAIDTYA 65 (100)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHSTTCTH---------HHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCcHH---------HHHHHHHHHHHcCCHHHHHHHHH
Confidence 445566666666555555544443322111 11122356777788888877653
No 208
>3lvg_A Clathrin heavy chain 1; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} PDB: 3lvh_A
Probab=67.92 E-value=0.8 Score=36.81 Aligned_cols=65 Identities=14% Similarity=0.200 Sum_probs=46.5
Q ss_pred HHHHHHHHHhCCHHHHHHHHhhCCC-C----------Cch--HHHHHHHH-HhCCChHHHHHHHHhcCCHHHHHHHHhh
Q psy11102 19 EKLISVYTELGDFEALESCARKLPD-S----------SPL--LKPMGEIF-VKYGLCEQAVYVFDKNKHKSSQWLTVVQ 83 (87)
Q Consensus 19 ~k~ie~~~~~ed~d~L~~l~~~L~~-~----------~~l--L~~ia~~F-~~~G~~~~Av~aylk~gd~k~ai~~cv~ 83 (87)
+.+.+.|...|||++|..-+++-+. + |+| ..+||-.+ ++++..++||+.+-|-+.+|.||+++.+
T Consensus 414 eAln~L~IEEEDy~~LR~SId~ydNFD~i~LA~rLEkHeL~eFRrIAA~LYkkn~rw~qsi~l~KkDklykDAietAa~ 492 (624)
T 3lvg_A 414 ESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRLEKHELIEFRRIAAYLFKGNNRWKQSVELCKKDSLYKDAMQYASE 492 (624)
T ss_dssp HHHHHHHHHTTCCHHHHHTTSSCCCSCTTHHHHHHHTCSSHHHHHHHHHHHHTTCHHHHHSSCSSTTCCTTGGGTTTTT
T ss_pred HHHHHHHhhhhhHHHHHHHHHHhccccHHHHHHHHhhCchHHHHHHHHHHHHhcccHHHHHHHHHhcccHHHHHHHHHH
Confidence 5678899999999999876665533 1 222 34455444 7778888888888888888888877654
No 209
>2qx5_A Nucleoporin NIC96; mRNA transport, nuclear pore complex, nucleus, protein transport, translocation, transport, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2rfo_A
Probab=66.28 E-value=7.8 Score=31.13 Aligned_cols=36 Identities=14% Similarity=0.124 Sum_probs=27.5
Q ss_pred HHHHHHHHHhccHHHHHHHHHHhCCHHHHHHHHhhC
Q psy11102 6 SQAREYYEKCHCYEKLISVYTELGDFEALESCARKL 41 (87)
Q Consensus 6 ~~A~~yY~~~~n~~k~ie~~~~~ed~d~L~~l~~~L 41 (87)
..|+.-....|+++.||.+|...|+||...+++..+
T Consensus 447 ~~aA~~ae~~G~~~dAi~LY~La~~~d~vl~lln~~ 482 (661)
T 2qx5_A 447 EQAARRADEDGRIYDSILLYQLAEEYDIVITLVNSL 482 (661)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 467777778888888888888888888877776654
No 210
>2vxg_A LD41624, GE-1, CG6181-PA, isoform A; decapping, EDC4, hedls, mRNA decay, P-BODY, gene regulation; 1.9A {Drosophila melanogaster}
Probab=59.41 E-value=8.2 Score=25.14 Aligned_cols=36 Identities=8% Similarity=-0.087 Sum_probs=32.1
Q ss_pred HHHHHhCCChHHHHHHHHhcCCHHHHHHHHhhcCCC
Q psy11102 52 GEIFVKYGLCEQAVYVFDKNKHKSSQWLTVVQDKPS 87 (87)
Q Consensus 52 a~~F~~~G~~~~Av~aylk~gd~k~ai~~cv~~~~~ 87 (87)
-..|.+.|.+++|..--+..+|..-...+|++.+|+
T Consensus 7 I~~Ll~~g~~eeAf~~aL~ssd~~lv~~lc~~~dp~ 42 (139)
T 2vxg_A 7 IKQLLMAGQINKAFHQALLANDLGLVEFTLRHTDSN 42 (139)
T ss_dssp HHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHSCHH
T ss_pred HHHHHHCCCHHHHHHHHHHhCcHHHHHHHHHcCCHH
Confidence 456788899999999999999999999999999884
No 211
>2wm9_A Dedicator of cytokinesis protein 9; polymorphism, cell membrane, phosphoprotein, nucleotide-binding, alternative splicing; 2.20A {Homo sapiens} PDB: 2wmn_A* 2wmo_A*
Probab=57.60 E-value=13 Score=27.97 Aligned_cols=35 Identities=14% Similarity=0.068 Sum_probs=23.2
Q ss_pred hHHHHHHHHHhCCChHHHHH-------HHHhcCCHHHHHHHH
Q psy11102 47 LLKPMGEIFVKYGLCEQAVY-------VFDKNKHKSSQWLTV 81 (87)
Q Consensus 47 lL~~ia~~F~~~G~~~~Av~-------aylk~gd~k~ai~~c 81 (87)
+|.++++.|.+.++.|.|+. .|.+-.|++++-+++
T Consensus 90 ll~~ai~~f~kg~~~E~ai~~~k~L~~~ye~~~dy~~Ls~~~ 131 (428)
T 2wm9_A 90 LLEQCADGLWKAERYELIADIYKLIIPIYEKRRDFERLAHLY 131 (428)
T ss_dssp HHHHHHHHHHHTTCGGGHHHHHTTTHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 56777777777777777766 345556666665554
No 212
>2yin_A DOCK2, dedicator of cytokinesis protein 2; apoptosis, DOCK, DOCK guanine nucleotide exchange factors; 2.70A {Homo sapiens} PDB: 3b13_A
Probab=56.86 E-value=16 Score=27.61 Aligned_cols=37 Identities=27% Similarity=0.405 Sum_probs=28.5
Q ss_pred hHHHHHHHHHHhccHHHHHHHHHH------h--CCHHHHHHHHhh
Q psy11102 4 LVSQAREYYEKCHCYEKLISVYTE------L--GDFEALESCARK 40 (87)
Q Consensus 4 ~w~~A~~yY~~~~n~~k~ie~~~~------~--ed~d~L~~l~~~ 40 (87)
-+.+|++||.+|+.+|.+|.+|-. . -||.+|.++-..
T Consensus 94 L~~~~i~~f~kg~~~E~ai~l~k~L~~~yE~~~~Dy~~Ls~~~~~ 138 (436)
T 2yin_A 94 LYETIIGYFDKGKMWEEAISLCKELAEQYEMEIFDYELLSQNLIQ 138 (436)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 367899999999999999987643 2 588888776444
No 213
>2d2s_A Exocyst complex component EXO84; tethering complex, EXO84P, endocytosis/exocytosis complex; 2.85A {Saccharomyces cerevisiae} SCOP: a.118.17.2
Probab=56.24 E-value=29 Score=24.04 Aligned_cols=26 Identities=42% Similarity=0.428 Sum_probs=19.0
Q ss_pred chHHHHHHHHHhCCChHHHHHHHHhc
Q psy11102 46 PLLKPMGEIFVKYGLCEQAVYVFDKN 71 (87)
Q Consensus 46 ~lL~~ia~~F~~~G~~~~Av~aylk~ 71 (87)
..+......+.+.|..++|.++|++.
T Consensus 92 ~~~r~~v~~L~rLg~~~~A~~lfL~~ 117 (235)
T 2d2s_A 92 VHLKSGTENMIKLGLPEQALDLFLQN 117 (235)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCChhHHHHHHHHH
Confidence 44666777777788888888888764
No 214
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=55.93 E-value=54 Score=24.17 Aligned_cols=51 Identities=22% Similarity=0.301 Sum_probs=33.5
Q ss_pred HHHHHHHHhCCHHHHHHHHh--------hCCCCCc----hHHHHHHHHHhCCChHHHHHHHHh
Q psy11102 20 KLISVYTELGDFEALESCAR--------KLPDSSP----LLKPMGEIFVKYGLCEQAVYVFDK 70 (87)
Q Consensus 20 k~ie~~~~~ed~d~L~~l~~--------~L~~~~~----lL~~ia~~F~~~G~~~~Av~aylk 70 (87)
..++-++..++|++.+.+.+ .|+++|+ .+..+|..+.+.|.+++|...|.|
T Consensus 292 ~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~ 354 (429)
T 3qwp_A 292 KKIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTR 354 (429)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHH
Confidence 44556667777777666653 3455554 456677777778888888776654
No 215
>2ekk_A UBA domain from E3 ubiquitin-protein ligase HUWE1; ubiquitin associated domain, compact three helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=55.15 E-value=16 Score=18.97 Aligned_cols=30 Identities=10% Similarity=0.053 Sum_probs=22.0
Q ss_pred HHHhCC-ChHHHHHHHHhcCCHHHHHHHHhh
Q psy11102 54 IFVKYG-LCEQAVYVFDKNKHKSSQWLTVVQ 83 (87)
Q Consensus 54 ~F~~~G-~~~~Av~aylk~gd~k~ai~~cv~ 83 (87)
.+...| --++|+.|+..+|+++.|++...+
T Consensus 15 ~L~~MGF~~~~a~~AL~~~~n~e~A~~~L~~ 45 (47)
T 2ekk_A 15 QLMDMGFTREHAMEALLNTSTMEQATEYLLT 45 (47)
T ss_dssp HHHHHHCCHHHHHHHHHHSCSHHHHHHHHHT
T ss_pred HHHHcCCCHHHHHHHHHHcCCHHHHHHHHHc
Confidence 333444 337888999999999999987654
No 216
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=54.40 E-value=33 Score=20.60 Aligned_cols=13 Identities=31% Similarity=0.478 Sum_probs=6.3
Q ss_pred hhHHHHHHHHHHh
Q psy11102 3 TLVSQAREYYEKC 15 (87)
Q Consensus 3 ~~w~~A~~yY~~~ 15 (87)
+|+++|.++|.++
T Consensus 9 ~d~~~A~~~~~~a 21 (138)
T 1klx_A 9 KDLKKAIQYYVKA 21 (138)
T ss_dssp HHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHH
Confidence 3445555555443
No 217
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=54.30 E-value=20 Score=24.31 Aligned_cols=70 Identities=10% Similarity=0.126 Sum_probs=49.4
Q ss_pred HHhccHHHHHHHHHHhCCHHHHHHHHhh-CC-CC-CchHHHHHHHHHhCCC--hH---HHHHHHHhcCCHHHHHHHHh
Q psy11102 13 EKCHCYEKLISVYTELGDFEALESCARK-LP-DS-SPLLKPMGEIFVKYGL--CE---QAVYVFDKNKHKSSQWLTVV 82 (87)
Q Consensus 13 ~~~~n~~k~ie~~~~~ed~d~L~~l~~~-L~-~~-~~lL~~ia~~F~~~G~--~~---~Av~aylk~gd~k~ai~~cv 82 (87)
..|||..+-|+||.+.+-.-+...++-. |- .+ ...|.+++.-+..... .+ .=..||-|.|+.+.|-++-.
T Consensus 72 s~C~NlKrVi~C~~~~n~~se~vd~ALd~lv~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~ 149 (172)
T 1wy6_A 72 DKCQNLKSVVECGVINNTLNEHVNKALDILVIQGKRDKLEEIGREILKNNEVSASILVAIANALRRVGDERDATTLLI 149 (172)
T ss_dssp GGCSCTHHHHHHHHHTTCCCHHHHHHHHHHHHTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HhhhcHHHHHHHHHHhcchHHHHHHHHHHHHHhccHhHHHHHHHHHhccCCCChHHHHHHHHHHHHhcchhhHHHHHH
Confidence 4799999999999999988888777655 32 34 3667777776433333 22 22479999999999877643
No 218
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=53.49 E-value=26 Score=27.80 Aligned_cols=60 Identities=12% Similarity=0.047 Sum_probs=43.6
Q ss_pred hHHHHHHHHHHhccHHHHHHHHHHhCCHHHHHHHHhhCCCCCchHHHHHHHHHhCCChHHHHHHHHhc
Q psy11102 4 LVSQAREYYEKCHCYEKLISVYTELGDFEALESCARKLPDSSPLLKPMGEIFVKYGLCEQAVYVFDKN 71 (87)
Q Consensus 4 ~w~~A~~yY~~~~n~~k~ie~~~~~ed~d~L~~l~~~L~~~~~lL~~ia~~F~~~G~~~~Av~aylk~ 71 (87)
-|-.+++++.+.|+.+.++ -+-|++-+..+|.+..+-...+.+..+.|..+.|.+.|.++
T Consensus 345 lW~~ya~~~~~~~~~~~a~--------r~il~rAi~~~P~s~~Lwl~~a~~ee~~~~~e~aR~iyek~ 404 (679)
T 4e6h_A 345 IWFNMANYQGEKNTDSTVI--------TKYLKLGQQCIPNSAVLAFSLSEQYELNTKIPEIETTILSC 404 (679)
T ss_dssp HHHHHHHHHHHHSCCTTHH--------HHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCcHHHHH--------HHHHHHHHHhCCCCHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 4667777777777765554 13335556778876566677899999999999999998775
No 219
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=48.96 E-value=72 Score=23.05 Aligned_cols=42 Identities=5% Similarity=0.122 Sum_probs=27.7
Q ss_pred CHHHHHHHHhhCCCC-CchHHHHHHHHHhCC---ChHHHHHHHHhc
Q psy11102 30 DFEALESCARKLPDS-SPLLKPMGEIFVKYG---LCEQAVYVFDKN 71 (87)
Q Consensus 30 d~d~L~~l~~~L~~~-~~lL~~ia~~F~~~G---~~~~Av~aylk~ 71 (87)
+.+..+.+.+....+ ......+|.++...| ..++|++.|.+.
T Consensus 160 ~~~~a~~~~~~a~~~~~~a~~~Lg~~~~~~g~~~~~~~A~~~~~~a 205 (452)
T 3e4b_A 160 HLDDVERICKAALNTTDICYVELATVYQKKQQPEQQAELLKQMEAG 205 (452)
T ss_dssp GHHHHHHHHHHHTTTCTTHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCcccHHHHHHHHHHH
Confidence 344555555555553 456778888888888 777888777654
No 220
>3lvg_A Clathrin heavy chain 1; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} PDB: 3lvh_A
Probab=47.11 E-value=0.42 Score=38.42 Aligned_cols=74 Identities=9% Similarity=0.115 Sum_probs=50.7
Q ss_pred hhHHHHHHHHHHhccH-------HHHHHHHHHhCCHHHHHHHHhhCCCCCchHHHHHHHHHhCCChHHHHHHHHhcCCHH
Q psy11102 3 TLVSQAREYYEKCHCY-------EKLISVYTELGDFEALESCARKLPDSSPLLKPMGEIFVKYGLCEQAVYVFDKNKHKS 75 (87)
Q Consensus 3 ~~w~~A~~yY~~~~n~-------~k~ie~~~~~ed~d~L~~l~~~L~~~~~lL~~ia~~F~~~G~~~~Av~aylk~gd~k 75 (87)
++|+.=+.|..-++.. ..+|-||.+.+...+||+.+.. .++.-+..+|+..-.-|+++.|+-.|....++.
T Consensus 97 ~~~edLv~yL~MaRk~~ke~~IDteLi~ayAk~~rL~elEefl~~--~N~A~iq~VGDrcf~e~lYeAAKilys~isN~a 174 (624)
T 3lvg_A 97 GNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFING--PNNAHIQQVGDRCYDEKMYDAAKLLYNNVSNFG 174 (624)
T ss_dssp SCCTTHHHHHHTTSTTCCSTTTTHHHHHHHHTSCSSSTTTSTTSC--CSSSCTHHHHHHHHHSCCSTTSSTTGGGSCCCT
T ss_pred CCHHHHHHHHHHHHHHhcccccHHHHHHHHHhhCcHHHHHHHHcC--CCcccHHHHHHHHHHccCHHHHHHHHHhCccHH
Confidence 4444555555555443 2577788888887777766654 345678999999999999999988776655544
Q ss_pred HHH
Q psy11102 76 SQW 78 (87)
Q Consensus 76 ~ai 78 (87)
++-
T Consensus 175 kLA 177 (624)
T 3lvg_A 175 RLA 177 (624)
T ss_dssp TTS
T ss_pred HHH
Confidence 433
No 221
>3mhs_B Protein SUS1; multi-protein complex, hydrolase-transcription regulator-Pro binding complex, acetylation, cytoplasm; 1.89A {Saccharomyces cerevisiae} PDB: 3fwc_C 3fwb_C 3kjl_A 3m99_C 3mhh_B 3kik_A 4fip_B 4fjc_B 4fk5_B
Probab=44.50 E-value=28 Score=21.21 Aligned_cols=35 Identities=14% Similarity=0.215 Sum_probs=27.9
Q ss_pred HHHHHHHHhccHHHHHHHH----HHhCCHHHHHHHHhhC
Q psy11102 7 QAREYYEKCHCYEKLISVY----TELGDFEALESCARKL 41 (87)
Q Consensus 7 ~A~~yY~~~~n~~k~ie~~----~~~ed~d~L~~l~~~L 41 (87)
+--++...+|+++++-+.+ ..-||+|++..++++.
T Consensus 11 ~I~~~LveSGe~erL~~lL~~rL~EcGW~Devr~~~r~~ 49 (96)
T 3mhs_B 11 QIQQYLVESGNYELISNELKARLLQEGWVDKVKDLTKSE 49 (96)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred HHHHHHHHCCcHHHHHHHHHHHHHHCCcHHHHHHHHHHH
Confidence 3456778899999887764 5789999999999963
No 222
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=43.08 E-value=68 Score=23.22 Aligned_cols=54 Identities=11% Similarity=0.028 Sum_probs=33.0
Q ss_pred HHHHHHHHHHhCCHHHHHHHHhhCC----CCCchHHHHHHHHHhCCChHHHHHHHHhc
Q psy11102 18 YEKLISVYTELGDFEALESCARKLP----DSSPLLKPMGEIFVKYGLCEQAVYVFDKN 71 (87)
Q Consensus 18 ~~k~ie~~~~~ed~d~L~~l~~~L~----~~~~lL~~ia~~F~~~G~~~~Av~aylk~ 71 (87)
.+.+++.+...|+++.+...++.+- -+-.+-..+-.-+...|...+|.+.|-++
T Consensus 174 ~~~~~~~~l~~g~~~~a~~~l~~~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~ 231 (388)
T 2ff4_A 174 HTAKAEAEIACGRASAVIAELEALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRV 231 (388)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 4567777888888887776655542 22234445555556666666666666554
No 223
>1v92_A NSFL1 cofactor P47; 3-helix bundle, recombination; NMR {Rattus norvegicus} SCOP: a.5.2.3
Probab=43.06 E-value=29 Score=17.51 Aligned_cols=26 Identities=19% Similarity=0.213 Sum_probs=19.4
Q ss_pred hHHHHHHHHHHh-ccHHHHHHHHHHhC
Q psy11102 4 LVSQAREYYEKC-HCYEKLISVYTELG 29 (87)
Q Consensus 4 ~w~~A~~yY~~~-~n~~k~ie~~~~~e 29 (87)
+...|..|...+ .|++.|+..||..+
T Consensus 19 ~~~~A~~~L~~~~wdle~Ai~~ff~~~ 45 (46)
T 1v92_A 19 EEDRARFFLESAGWDLQIALASFYEDG 45 (46)
T ss_dssp CHHHHHHHHHHTTSCSHHHHHHHHHTC
T ss_pred CHHHHHHHHHHcCCCHHHHHHHHHcCC
Confidence 456777787766 48999999888654
No 224
>4ae4_A Ubiquitin-associated protein 1; protein transport, endosomal sorting, tetherin, VPU, HIV-1, monoubiquitin; HET: NHE; 1.65A {Homo sapiens} PDB: 4ae4_B*
Probab=42.54 E-value=56 Score=20.43 Aligned_cols=72 Identities=10% Similarity=0.012 Sum_probs=42.6
Q ss_pred HHHHhccHHHHHHHHHHhCC-------HHHHHHHHhhCCCC---CchHHHHHHHHHhCCCh-HHHHHHHHhc-CCHHHHH
Q psy11102 11 YYEKCHCYEKLISVYTELGD-------FEALESCARKLPDS---SPLLKPMGEIFVKYGLC-EQAVYVFDKN-KHKSSQW 78 (87)
Q Consensus 11 yY~~~~n~~k~ie~~~~~ed-------~d~L~~l~~~L~~~---~~lL~~ia~~F~~~G~~-~~Av~aylk~-gd~k~ai 78 (87)
++.-++|.+++++-+..+.+ -...++.+..-..+ ...-.+.-..|...|-- ++|++|..+. ||+..|+
T Consensus 29 l~~~g~~~e~amewL~~h~~L~d~~~d~~~~e~~l~~~~~~~~~~~~~~~~v~~L~eMGF~~~~a~~AL~~~~nd~erAl 108 (118)
T 4ae4_A 29 MKAAGANIEQILDYLFAHGQLCEKGFDPLLVEEALEMHQCSEEKMMEFLQLMSKFKEMGFELKDIKEVLLLHNNDQDNAL 108 (118)
T ss_dssp HHHHCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHTTTCHHHHH
T ss_pred HHHHCcCHHHHHHHHHHhchhcccCCChhhhHHHHHhccCCccccccCHHHHHHHHHcCCCHHHHHHHHHHcCCCHHHHH
Confidence 45555688888888887641 11122222221111 12233556778888854 5677788766 7999999
Q ss_pred HHHh
Q psy11102 79 LTVV 82 (87)
Q Consensus 79 ~~cv 82 (87)
+.-+
T Consensus 109 ewL~ 112 (118)
T 4ae4_A 109 EDLM 112 (118)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8654
No 225
>3iko_C Nucleoporin NUP84; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.20A {Saccharomyces cerevisiae} PDB: 3jro_C
Probab=41.51 E-value=20 Score=27.45 Aligned_cols=28 Identities=11% Similarity=0.020 Sum_probs=13.8
Q ss_pred HHHhCCChHHHHHHHHhcCCHHHHHHHH
Q psy11102 54 IFVKYGLCEQAVYVFDKNKHKSSQWLTV 81 (87)
Q Consensus 54 ~F~~~G~~~~Av~aylk~gd~k~ai~~c 81 (87)
.+...|..+.|++...++|++=.|.-+|
T Consensus 186 ~liR~G~~~eA~~lc~~~gq~WRAasL~ 213 (460)
T 3iko_C 186 ELILAGAIDEALEEAKLSDNISICMILC 213 (460)
T ss_dssp HHHHTTCHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHHcCCHHHHHHHc
Confidence 3344455555555555555555444444
No 226
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=41.30 E-value=43 Score=24.72 Aligned_cols=38 Identities=16% Similarity=0.040 Sum_probs=28.4
Q ss_pred CchHHHHHHHHHhCCChHHHHH-------HHHhcCCHHHHHHHHh
Q psy11102 45 SPLLKPMGEIFVKYGLCEQAVY-------VFDKNKHKSSQWLTVV 82 (87)
Q Consensus 45 ~~lL~~ia~~F~~~G~~~~Av~-------aylk~gd~k~ai~~cv 82 (87)
+..+..++..+.+.+.+++|++ .+++.|+.-++.|+|+
T Consensus 35 HQ~~RTi~~Ry~~~k~y~eAidLL~~GA~~ll~~~Q~~sg~DL~~ 79 (336)
T 3lpz_A 35 AQETRLVAARYSKQGNWAAAVDILASVSQTLLRSGQGGSGGDLAV 79 (336)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHCCCcchHHHHHH
Confidence 3456677777777788877776 6778888888888874
No 227
>1z0j_B FYVE-finger-containing RAB5 effector protein RABE, RAS-related protein RAB-22A; RAB GTPase, RAB22 GTPase, rabenosyn, endosomal trafficking; HET: GTP; 1.32A {Homo sapiens} SCOP: a.2.19.1
Probab=40.20 E-value=35 Score=19.26 Aligned_cols=34 Identities=12% Similarity=0.158 Sum_probs=30.5
Q ss_pred HHHHHhccHHHHHHHHHHhCCHHHHHHHHhhCCC
Q psy11102 10 EYYEKCHCYEKLISVYTELGDFEALESCARKLPD 43 (87)
Q Consensus 10 ~yY~~~~n~~k~ie~~~~~ed~d~L~~l~~~L~~ 43 (87)
.++.|..+.+..|.-+-..+.||+++-|.++|.+
T Consensus 13 pL~EQi~~I~~yI~qAk~~~R~DEV~~Le~NLrE 46 (59)
T 1z0j_B 13 LLLQQIDNIKAYIFDAKQCGRLDEVEVLTENLRE 46 (59)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Confidence 4678899999999999999999999999988765
No 228
>1fc3_A SPO0A; response regulator, signaling protein; 2.00A {Geobacillus stearothermophilus} SCOP: a.4.6.3 PDB: 1lq1_A
Probab=39.36 E-value=14 Score=23.46 Aligned_cols=41 Identities=17% Similarity=0.211 Sum_probs=32.7
Q ss_pred cHHHHHHHHHHhCCHHHHHHHHh-------hCCCCCchHHHHHHHHHh
Q psy11102 17 CYEKLISVYTELGDFEALESCAR-------KLPDSSPLLKPMGEIFVK 57 (87)
Q Consensus 17 n~~k~ie~~~~~ed~d~L~~l~~-------~L~~~~~lL~~ia~~F~~ 57 (87)
+..-+|+.....|+.+.|.++.. .=|.+++++..++++++.
T Consensus 68 aIR~aIe~aw~~g~~~~l~~ifg~t~~~~~~kPTnsEFI~~iad~Lr~ 115 (120)
T 1fc3_A 68 AIRHAIEVAWSRGNLESISSLFGYTVSVSKAKPTNSEFIAMVADKLRL 115 (120)
T ss_dssp HHHHHHHHHHHSSCTTTTHHHHCHHHHTCSSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHCCCcccCCCCCCHHHHHHHHHHHHHH
Confidence 34557778888999999999973 556778999999999864
No 229
>4dhx_B Enhancer of yellow 2 transcription factor homolog, 80 kDa MCM3-associated protein; mRNA export, transport protein-DNA binding protein complex; 2.10A {Homo sapiens}
Probab=39.25 E-value=52 Score=20.16 Aligned_cols=36 Identities=14% Similarity=0.144 Sum_probs=29.0
Q ss_pred HHHHHHHHHhccHHHHHHHH----HHhCCHHHHHHHHhhC
Q psy11102 6 SQAREYYEKCHCYEKLISVY----TELGDFEALESCARKL 41 (87)
Q Consensus 6 ~~A~~yY~~~~n~~k~ie~~----~~~ed~d~L~~l~~~L 41 (87)
...-++...+|+++++-+.+ ..-||+|.+..++++.
T Consensus 14 a~I~~~LveSGe~erL~~lL~~rL~EcGW~Devr~~~r~~ 53 (101)
T 4dhx_B 14 AAINQKLIETGERERLKELLRAKLIECGWKDQLKAHCKEV 53 (101)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCcHHHHHHHHHHH
Confidence 34557788899999887765 4679999999999884
No 230
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=38.17 E-value=71 Score=21.32 Aligned_cols=24 Identities=25% Similarity=0.274 Sum_probs=18.5
Q ss_pred HHHHHHHHhCCHHHHHHHHhhCCC
Q psy11102 20 KLISVYTELGDFEALESCARKLPD 43 (87)
Q Consensus 20 k~ie~~~~~ed~d~L~~l~~~L~~ 43 (87)
|++.||..++.++.-..+...+|.
T Consensus 127 kia~C~~~l~~~~~Ai~~Le~Ip~ 150 (167)
T 3ffl_A 127 KLAECYTVLKQDKDAIAILDGIPS 150 (167)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTSCG
T ss_pred HHHHHHHHHCCHHHHHHHHhcCCc
Confidence 567788888888887777777776
No 231
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=37.54 E-value=19 Score=23.64 Aligned_cols=22 Identities=14% Similarity=0.199 Sum_probs=17.0
Q ss_pred CCCCCchHHHHHHHHHhCCChH
Q psy11102 41 LPDSSPLLKPMGEIFVKYGLCE 62 (87)
Q Consensus 41 L~~~~~lL~~ia~~F~~~G~~~ 62 (87)
=|.+...+..+|.-+.+.|..+
T Consensus 32 ~P~~aea~~n~G~~l~~l~~~~ 53 (158)
T 1zu2_A 32 NPLDADNLTRWGGVLLELSQFH 53 (158)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHS
T ss_pred CCCCHHHHHHHHHHHHHhcccc
Confidence 3666788888999998887654
No 232
>1yzm_A FYVE-finger-containing RAB5 effector protein rabenosyn-5; RAB GTPase, vesicular trafficking, protein transport; 1.50A {Homo sapiens} SCOP: a.2.19.1
Probab=36.65 E-value=51 Score=18.00 Aligned_cols=34 Identities=12% Similarity=0.236 Sum_probs=30.4
Q ss_pred HHHHHhccHHHHHHHHHHhCCHHHHHHHHhhCCC
Q psy11102 10 EYYEKCHCYEKLISVYTELGDFEALESCARKLPD 43 (87)
Q Consensus 10 ~yY~~~~n~~k~ie~~~~~ed~d~L~~l~~~L~~ 43 (87)
.+..|..+.+..|.-+-..+.||+++-|-++|.+
T Consensus 6 PL~EQ~~~I~~~I~qAk~~~r~DEV~~Le~NLrE 39 (51)
T 1yzm_A 6 PLLQQIHNITSFIRQAKAAGRMDEVRTLQENLRQ 39 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHH
Confidence 4678889999999999999999999999988765
No 233
>2xb0_X Chromo domain-containing protein 1; hydrolase, DNA-binding protein, transcription, chromatin REG; HET: GOL; 2.00A {Saccharomyces cerevisiae} PDB: 3ted_A
Probab=36.50 E-value=37 Score=24.34 Aligned_cols=51 Identities=12% Similarity=0.119 Sum_probs=39.9
Q ss_pred cHHHHHHHHHHhCCHH-HHHHHHhh--CCCC-CchHHHHHHHHHhCCChHHHHHHHH
Q psy11102 17 CYEKLISVYTELGDFE-ALESCARK--LPDS-SPLLKPMGEIFVKYGLCEQAVYVFD 69 (87)
Q Consensus 17 n~~k~ie~~~~~ed~d-~L~~l~~~--L~~~-~~lL~~ia~~F~~~G~~~~Av~ayl 69 (87)
...+++.++.+-|+.. .++.|++. |++. ...+..+++.+.+ .|.+||+...
T Consensus 10 EiR~l~Ra~~kfG~~~~R~e~I~~dA~L~~ks~~~i~~~~~~li~--~c~~av~e~~ 64 (270)
T 2xb0_X 10 EVRALYKAILKFGNLKEILDELIADGTLPVKSFEKYGETYDEMME--AAKDCVHEEE 64 (270)
T ss_dssp HHHHHHHHHHHHSSCTTCHHHHHHTTSSCCCCHHHHHHHHHHHHH--HHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHhcccccCCHHHHHHHHHHHHH--HHHHHHHHHH
Confidence 4567888888888855 57777776 6775 4889999999987 7999998654
No 234
>2dam_A ETEA protein; KIAA0887, UBA-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=36.06 E-value=53 Score=18.43 Aligned_cols=27 Identities=15% Similarity=0.101 Sum_probs=21.6
Q ss_pred hHHHHHHHHHHhc-cHHHHHHHHHHhCC
Q psy11102 4 LVSQAREYYEKCH-CYEKLISVYTELGD 30 (87)
Q Consensus 4 ~w~~A~~yY~~~~-n~~k~ie~~~~~ed 30 (87)
+...|..|....+ |++.||..||..++
T Consensus 33 d~~~A~~~Le~~~WnLe~Av~~ff~~~~ 60 (67)
T 2dam_A 33 SMDQCRHTLEQHNWNIEAAVQDRLNEQE 60 (67)
T ss_dssp CHHHHHHHHHHHTSCHHHHHHHHHHSSC
T ss_pred CHHHHHHHHHHcCCCHHHHHHHHHhCCC
Confidence 5677888888874 99999999997653
No 235
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=36.02 E-value=62 Score=19.72 Aligned_cols=35 Identities=17% Similarity=0.158 Sum_probs=29.0
Q ss_pred HHHHHHHhCCChHHHHH----HHHhcCCHHHHHHHHhhc
Q psy11102 50 PMGEIFVKYGLCEQAVY----VFDKNKHKSSQWLTVVQD 84 (87)
Q Consensus 50 ~ia~~F~~~G~~~~Av~----aylk~gd~k~ai~~cv~~ 84 (87)
.+|+.+.+.|-.+.|+. |..-|++|..++..+-+-
T Consensus 25 ~lGE~L~~~g~~e~av~Hf~nAl~Vc~qP~~LL~i~q~T 63 (95)
T 1om2_A 25 QLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVLQQT 63 (95)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHHHHHHhh
Confidence 57999999999999998 556689999998877553
No 236
>1wol_A ST0689, 122AA long conserved hypothetical protein; alpha helix, loop, unknown function; 1.62A {Sulfolobus tokodaii}
Probab=35.67 E-value=18 Score=21.98 Aligned_cols=27 Identities=7% Similarity=0.067 Sum_probs=19.0
Q ss_pred HHHHHHHHhccHHHHHHHHHHhCCHHH
Q psy11102 7 QAREYYEKCHCYEKLISVYTELGDFEA 33 (87)
Q Consensus 7 ~A~~yY~~~~n~~k~ie~~~~~ed~d~ 33 (87)
.+..++.++...-+.++.....|+|+.
T Consensus 3 ~~~~wl~~A~~dL~~A~~~~~~g~y~~ 29 (122)
T 1wol_A 3 RVEDWIKQAERDLEEARYAKSGGYYEL 29 (122)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCChHH
Confidence 345667777777777777777777764
No 237
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=35.56 E-value=1.1e+02 Score=21.83 Aligned_cols=45 Identities=11% Similarity=0.208 Sum_probs=33.8
Q ss_pred HHHHHHHHhhCCCCCchHHHHHHHHHhCCChHHHHHHHHhcCCHHHHHHHHhh
Q psy11102 31 FEALESCARKLPDSSPLLKPMGEIFVKYGLCEQAVYVFDKNKHKSSQWLTVVQ 83 (87)
Q Consensus 31 ~d~L~~l~~~L~~~~~lL~~ia~~F~~~G~~~~Av~aylk~gd~k~ai~~cv~ 83 (87)
|..-.+++..||..||+-..++--| +|--|.-.|+++.|+.++-+
T Consensus 179 Y~~A~~iA~~L~pthPirLGLaLNf--------SVFyYEiln~~~~Ac~lAk~ 223 (260)
T 2npm_A 179 YKDATVVAKDLEPTHPIRLGLALNF--------SVFHYEILNEPRAAIDMAKE 223 (260)
T ss_dssp HHHHHHHHTTSCTTCHHHHHHHHHH--------HHHHHHTSCCHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCcHHHHHHHHH--------HHHHHHHcCCHHHHHHHHHH
Confidence 4455556666999999876666655 78888889999998887643
No 238
>3f3f_C Nucleoporin NUP85; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_C 3f3p_C 3ewe_B
Probab=34.94 E-value=14 Score=29.43 Aligned_cols=73 Identities=14% Similarity=0.134 Sum_probs=23.9
Q ss_pred hhHHHHHHHHHHhcc-----HHHHHHHHH------HhCCHHHHHHHHhh--CCC-CCchHHHHHHHHHhCCChHHHHHHH
Q psy11102 3 TLVSQAREYYEKCHC-----YEKLISVYT------ELGDFEALESCARK--LPD-SSPLLKPMGEIFVKYGLCEQAVYVF 68 (87)
Q Consensus 3 ~~w~~A~~yY~~~~n-----~~k~ie~~~------~~ed~d~L~~l~~~--L~~-~~~lL~~ia~~F~~~G~~~~Av~ay 68 (87)
.-|.-|+.|...+.. -.+.|+-+- -..+.+.+..+|.+ ||+ ...+-+..|....+.|..=.|...|
T Consensus 480 sLW~vgI~yL~~~~~~~~~~gr~~IselLpr~Pl~Tndd~e~vL~iCa~l~L~~~ar~I~k~~g~k~l~~g~~geAL~~f 559 (570)
T 3f3f_C 480 ELWPVAIGLIALSATGTRSAKKMVIAELLPHYPFVTNDDIEWMLSICVEWRLPEIAKEIYTTLGNQMLSAHNIIESIANF 559 (570)
T ss_dssp TTHHHHHHHHHHCSSSCHHHHHHHHHHHGGGCCCCSHHHHHHHHHHHHHHTCHHHHHHHHHHHHC---------------
T ss_pred cchhHHHHHHhcCCccchhHHHHHHHHHhccCCCCCHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHCccHHHHHHHH
Confidence 468899999987653 222222221 11233333333333 233 2344445555555555444555555
Q ss_pred HhcCCHH
Q psy11102 69 DKNKHKS 75 (87)
Q Consensus 69 lk~gd~k 75 (87)
.|+|+++
T Consensus 560 ~rA~~~~ 566 (570)
T 3f3f_C 560 SRAGKYE 566 (570)
T ss_dssp -------
T ss_pred HHcCChh
Confidence 5555554
No 239
>2dal_A Protein KIAA0794; FAS associted factor 1, UBA-like domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=34.10 E-value=52 Score=18.08 Aligned_cols=25 Identities=20% Similarity=0.430 Sum_probs=19.5
Q ss_pred HHHHHHHHHHh-ccHHHHHHHHHHhC
Q psy11102 5 VSQAREYYEKC-HCYEKLISVYTELG 29 (87)
Q Consensus 5 w~~A~~yY~~~-~n~~k~ie~~~~~e 29 (87)
...|..|...+ .|++.||..||..+
T Consensus 30 ~~~A~~~Le~~~WnLe~Av~~ff~~~ 55 (62)
T 2dal_A 30 ESVGKHMLEACNNNLEMAVTMFLDGG 55 (62)
T ss_dssp HHHHHHHHHTTTSCHHHHHHHHHHSC
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHcCC
Confidence 56677777765 58999999998765
No 240
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=33.95 E-value=37 Score=24.80 Aligned_cols=52 Identities=19% Similarity=0.102 Sum_probs=35.7
Q ss_pred hHHHHHHHHHHhccHHHHHHHH--------HHhCCHHHHHHHHhhCCCC-CchHHHHHHHH
Q psy11102 4 LVSQAREYYEKCHCYEKLISVY--------TELGDFEALESCARKLPDS-SPLLKPMGEIF 55 (87)
Q Consensus 4 ~w~~A~~yY~~~~n~~k~ie~~--------~~~ed~d~L~~l~~~L~~~-~~lL~~ia~~F 55 (87)
++..|.++|.++.++-...=|- ...++++.+.+.+..+.++ .+.|--.|--.
T Consensus 102 ~~~RA~~Ly~ra~~y~~raL~~~~~~~~~~~~~~~~~~~~~~l~~~~~~dve~L~W~ai~~ 162 (301)
T 3u64_A 102 AYSRARKLYLRGARYALSSLETAYPGFTREVFSGDEQRLHKVLSRCTRVDVGTLYWVGTGY 162 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSTTHHHHHTSSCHHHHHHHHTTCCGGGHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHhcchhhHHHHHHHcCccccHHHHHHHHHH
Confidence 4668899999999886554442 3445678888888888775 46665554433
No 241
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=33.81 E-value=67 Score=18.20 Aligned_cols=39 Identities=13% Similarity=0.095 Sum_probs=25.6
Q ss_pred chhHHHHHHHHHHhcc---------------HHHHHHHHHHhCCHHHHHHHHhh
Q psy11102 2 TTLVSQAREYYEKCHC---------------YEKLISVYTELGDFEALESCARK 40 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n---------------~~k~ie~~~~~ed~d~L~~l~~~ 40 (87)
.++|..|+.+|.++-. +..+..|++++|+++.-....+.
T Consensus 18 ~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~ 71 (104)
T 2v5f_A 18 EADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKK 71 (104)
T ss_dssp TTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHH
Confidence 3677788888777544 33566777888887765554443
No 242
>2dzl_A Protein FAM100B; UBA-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.33 E-value=45 Score=18.74 Aligned_cols=27 Identities=15% Similarity=0.286 Sum_probs=20.8
Q ss_pred hHHHHHHHHHHh-ccHHHHHHHHHHhCC
Q psy11102 4 LVSQAREYYEKC-HCYEKLISVYTELGD 30 (87)
Q Consensus 4 ~w~~A~~yY~~~-~n~~k~ie~~~~~ed 30 (87)
+...|..|.... .|++.|+..||....
T Consensus 31 ~~~~A~~~Le~~~WdLe~Al~~ff~~~~ 58 (66)
T 2dzl_A 31 AADQAKQLLQAAHWQFETALSTFFQETN 58 (66)
T ss_dssp CHHHHHHHHHTTTTCHHHHHHHHHTCSC
T ss_pred CHHHHHHHHHHcCCCHHHHHHHHHcCCC
Confidence 456777888876 499999999997644
No 243
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=33.15 E-value=72 Score=18.42 Aligned_cols=35 Identities=17% Similarity=0.151 Sum_probs=28.2
Q ss_pred HHHHHHHhCCChHHHHHHHH----hcCCHHHHHHHHhhc
Q psy11102 50 PMGEIFVKYGLCEQAVYVFD----KNKHKSSQWLTVVQD 84 (87)
Q Consensus 50 ~ia~~F~~~G~~~~Av~ayl----k~gd~k~ai~~cv~~ 84 (87)
.+|+.+.+.|-.+.|+..|. -|++|..++..+-+-
T Consensus 22 ~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP~~LL~i~q~t 60 (73)
T 3ax2_A 22 QLGEELLAQGDYEKGVDHLTNAIAVCGQPQQLLQVLQQT 60 (73)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHcCCHHHHHHHHHhh
Confidence 67999999999999998555 479998888876543
No 244
>1z0k_B FYVE-finger-containing RAB5 effector protein rabenosyn-5; RAB gtpases, effector complex, vesicular trafficking, protein transport; HET: GTP MES; 1.92A {Homo sapiens} SCOP: a.2.19.1
Probab=31.91 E-value=56 Score=18.93 Aligned_cols=34 Identities=12% Similarity=0.236 Sum_probs=30.5
Q ss_pred HHHHHhccHHHHHHHHHHhCCHHHHHHHHhhCCC
Q psy11102 10 EYYEKCHCYEKLISVYTELGDFEALESCARKLPD 43 (87)
Q Consensus 10 ~yY~~~~n~~k~ie~~~~~ed~d~L~~l~~~L~~ 43 (87)
.++.|-.+.+..|.-+-..+.||+++-|-++|.+
T Consensus 24 PL~EQ~~~I~~yI~qAk~~~r~DEV~tLe~NLrE 57 (69)
T 1z0k_B 24 PLLQQIHNITSFIRQAKAAGRMDEVRTLQENLRQ 57 (69)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 5788999999999999999999999999888765
No 245
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=31.43 E-value=1.4e+02 Score=21.19 Aligned_cols=44 Identities=14% Similarity=0.233 Sum_probs=32.7
Q ss_pred HHHHHHHHh-hCCCCCchHHHHHHHHHhCCChHHHHHHHHhcCCHHHHHHHHh
Q psy11102 31 FEALESCAR-KLPDSSPLLKPMGEIFVKYGLCEQAVYVFDKNKHKSSQWLTVV 82 (87)
Q Consensus 31 ~d~L~~l~~-~L~~~~~lL~~ia~~F~~~G~~~~Av~aylk~gd~k~ai~~cv 82 (87)
|..-.+++. .||..||+-..++--| +|--|.-.|++..|+.++-
T Consensus 158 Y~~A~~iA~~~L~pthPirLGLaLNf--------SVFyYEiln~~~~Ac~lAk 202 (260)
T 1o9d_A 158 YKAAQDIATTELAPTHPIRLGLALNF--------SVFYYEILNSPDRACNLAK 202 (260)
T ss_dssp HHHHHHHHHHHSCTTCHHHHHHHHHH--------HHHHHHTSCCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCcHHHHHHHHH--------HHHHHHHccCHHHHHHHHH
Confidence 444555665 5999999876666555 7888888888888888764
No 246
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=31.41 E-value=83 Score=22.62 Aligned_cols=48 Identities=19% Similarity=0.159 Sum_probs=24.2
Q ss_pred HHHHHHhCCHHHHHHHHhhC-CC----C-CchHHHHHHHHHhCCChHHHHHHHH
Q psy11102 22 ISVYTELGDFEALESCARKL-PD----S-SPLLKPMGEIFVKYGLCEQAVYVFD 69 (87)
Q Consensus 22 ie~~~~~ed~d~L~~l~~~L-~~----~-~~lL~~ia~~F~~~G~~~~Av~ayl 69 (87)
..++...|++++-.++.... .. + -+....++..+.+.|..+.|.+.+-
T Consensus 107 a~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~ 160 (310)
T 3mv2_B 107 ATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFD 160 (310)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 34444445554444443332 21 2 2555566666666666666666663
No 247
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=31.37 E-value=37 Score=21.01 Aligned_cols=23 Identities=17% Similarity=0.218 Sum_probs=15.4
Q ss_pred HHHHHHHHhCCChHHHHHHHHhc
Q psy11102 49 KPMGEIFVKYGLCEQAVYVFDKN 71 (87)
Q Consensus 49 ~~ia~~F~~~G~~~~Av~aylk~ 71 (87)
..-|+.|...|-++.|+++..++
T Consensus 19 ~RrAe~ll~~gkydeAIech~kA 41 (97)
T 2crb_A 19 SRRADRLLAAGKYEEAISCHRKA 41 (97)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhHHHHHHhcCCHHHHHHHHHHH
Confidence 35567777777777777776553
No 248
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=31.31 E-value=1.6e+02 Score=24.18 Aligned_cols=53 Identities=15% Similarity=0.108 Sum_probs=41.5
Q ss_pred HHHHHHHHhCCHHHHHHHHhhCCCCCchHHHHHHHHHhCCChHHHHHHHHhcC
Q psy11102 20 KLISVYTELGDFEALESCARKLPDSSPLLKPMGEIFVKYGLCEQAVYVFDKNK 72 (87)
Q Consensus 20 k~ie~~~~~ed~d~L~~l~~~L~~~~~lL~~ia~~F~~~G~~~~Av~aylk~g 72 (87)
.+..-+...+.++-+.++++=+|.+.---=-.|.-+...|..+.|+++|.|+-
T Consensus 815 ~l~~~L~~~~~~~~a~eL~~~~~~t~~~~yv~gr~~L~~ge~~~A~~~F~kAA 867 (950)
T 4gq2_M 815 ELVEKLFLFKQYNACMQLIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTS 867 (950)
T ss_dssp HHHHHHHHTTCHHHHHHHGGGCCSSHHHHHHHHHHHHHTTCHHHHHHHHHTCC
T ss_pred HHHHHHHHhcHHHHHHHHHhhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 45666778889998999999999863223457888889999999999998864
No 249
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=30.95 E-value=25 Score=20.67 Aligned_cols=47 Identities=19% Similarity=0.126 Sum_probs=28.0
Q ss_pred HHHHHHHHhccHHHHHHHHHHhCCHHHHHHHHhhCCCC-C--chHHHHHHHHH
Q psy11102 7 QAREYYEKCHCYEKLISVYTELGDFEALESCARKLPDS-S--PLLKPMGEIFV 56 (87)
Q Consensus 7 ~A~~yY~~~~n~~k~ie~~~~~ed~d~L~~l~~~L~~~-~--~lL~~ia~~F~ 56 (87)
+|++ +-++|+++.++.+|... .+.|...+..-|+. . .+-.++.++..
T Consensus 25 ~Ave-~D~~g~y~eAl~lY~~a--ie~l~~alk~e~d~~~k~~ir~K~~eY~~ 74 (83)
T 2w2u_A 25 NAVK-ADKEGNAEEAITNYKKA--IEVLAQLVSLYRDGSTAAIYEQMINEYKR 74 (83)
T ss_dssp HHHH-HHHTTCHHHHHHHHHHH--HHHHHHHHHHSTTSSTHHHHHHHHHHHHH
T ss_pred HHHH-HHHhccHHHHHHHHHHH--HHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 4444 47889999999999754 33455555443432 2 34556665543
No 250
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=30.55 E-value=1.4e+02 Score=20.90 Aligned_cols=44 Identities=9% Similarity=0.272 Sum_probs=32.6
Q ss_pred HHHHHHHHh-hCCCCCchHHHHHHHHHhCCChHHHHHHHHhcCCHHHHHHHHh
Q psy11102 31 FEALESCAR-KLPDSSPLLKPMGEIFVKYGLCEQAVYVFDKNKHKSSQWLTVV 82 (87)
Q Consensus 31 ~d~L~~l~~-~L~~~~~lL~~ia~~F~~~G~~~~Av~aylk~gd~k~ai~~cv 82 (87)
|+.-.+++. .||..||+-..++--| +|--|.-.|++..|+.++-
T Consensus 156 Y~~A~~iA~~~L~pthPirLGLaLNf--------SVFyyEiln~~~~Ac~lAk 200 (236)
T 3iqu_A 156 YQEAMDISKKEMPPTNPIRLGLALNF--------SVFHYEIANSPEEAISLAK 200 (236)
T ss_dssp HHHHHHHHHHHSCTTCHHHHHHHHHH--------HHHHHHTSSCHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCCCcHHHHHHHHH--------HHHHHHHcCCHHHHHHHHH
Confidence 344444554 6999999877777655 7888888999998888764
No 251
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=30.52 E-value=25 Score=20.47 Aligned_cols=47 Identities=21% Similarity=0.177 Sum_probs=28.1
Q ss_pred HHHHHHHHhccHHHHHHHHHHhCCHHHHHHHHhhCCCC-C--chHHHHHHHHH
Q psy11102 7 QAREYYEKCHCYEKLISVYTELGDFEALESCARKLPDS-S--PLLKPMGEIFV 56 (87)
Q Consensus 7 ~A~~yY~~~~n~~k~ie~~~~~ed~d~L~~l~~~L~~~-~--~lL~~ia~~F~ 56 (87)
+|++ +-++||++.|+.+|... .+.|...++.-|+. . .+-.+|.++..
T Consensus 17 ~Ave-~D~~g~y~eAl~lY~~a--ie~l~~~lk~e~d~~~k~~ir~K~~eY~~ 66 (83)
T 2v6y_A 17 LAVK-ADKEGKVEDAITYYKKA--IEVLSQIIVLYPESVARTAYEQMINEYKK 66 (83)
T ss_dssp HHHH-HHHTTCHHHHHHHHHHH--HHHHHHHHHHCTTCTTHHHHHHHHHHHHH
T ss_pred HHHH-HHHhccHHHHHHHHHHH--HHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 3443 47789999999999854 33455555544432 2 34555655543
No 252
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=30.46 E-value=1.4e+02 Score=20.81 Aligned_cols=44 Identities=16% Similarity=0.271 Sum_probs=32.5
Q ss_pred HHHHHHHHh-hCCCCCchHHHHHHHHHhCCChHHHHHHHHhcCCHHHHHHHHh
Q psy11102 31 FEALESCAR-KLPDSSPLLKPMGEIFVKYGLCEQAVYVFDKNKHKSSQWLTVV 82 (87)
Q Consensus 31 ~d~L~~l~~-~L~~~~~lL~~ia~~F~~~G~~~~Av~aylk~gd~k~ai~~cv 82 (87)
|..-.+++. .||..||+-..++--| +|--|.-.|++..|+.++-
T Consensus 153 Y~~A~~iA~~~L~pthPirLgLaLN~--------SVF~yEil~~~~~A~~lAk 197 (234)
T 2br9_A 153 YKAASDIAMTELPPTHPIRLGLALNF--------SVFYYEILNSPDRACRLAK 197 (234)
T ss_dssp HHHHHHHHHHHSCTTCHHHHHHHHHH--------HHHHHHTSCCHHHHHHHHH
T ss_pred HHHHHHHHHccCCCCCcHHHHHHHHH--------HHHHHHHcCCHHHHHHHHH
Confidence 444455664 5999999876666555 7888888899988888764
No 253
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=30.12 E-value=26 Score=20.68 Aligned_cols=29 Identities=17% Similarity=0.242 Sum_probs=18.7
Q ss_pred HHhccHHHHHHHHHHhCCHHHHHHHHhhCCC
Q psy11102 13 EKCHCYEKLISVYTELGDFEALESCARKLPD 43 (87)
Q Consensus 13 ~~~~n~~k~ie~~~~~ed~d~L~~l~~~L~~ 43 (87)
-+.||++.|+.+|... .+.|...++.-|+
T Consensus 27 D~~g~y~eAl~lY~~A--ie~ll~alk~e~d 55 (86)
T 4a5x_A 27 DSESRYPQALVCYQEG--IDLLLQVLKGTKD 55 (86)
T ss_dssp HHTTCHHHHHHHHHHH--HHHHHHHHHTCCC
T ss_pred HHcCCHHHHHHHHHHH--HHHHHHHHhhCCC
Confidence 6679999999999743 2344444443333
No 254
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=29.58 E-value=98 Score=25.73 Aligned_cols=52 Identities=15% Similarity=0.110 Sum_probs=39.3
Q ss_pred HHHHHHHHhCCHHHHHHHHhhCCCCCchHHHHHHHHHhCCChHHHHHHHHhc
Q psy11102 20 KLISVYTELGDFEALESCARKLPDSSPLLKPMGEIFVKYGLCEQAVYVFDKN 71 (87)
Q Consensus 20 k~ie~~~~~ed~d~L~~l~~~L~~~~~lL~~ia~~F~~~G~~~~Av~aylk~ 71 (87)
-++..+...+.++-+.++..=+|.+.---=-.|..+...|..++|.++|.|+
T Consensus 817 ~l~~~l~~~~~~~~~~~l~~~~~~~~~~~yl~g~~~L~~ge~~~A~~~F~ka 868 (1139)
T 4fhn_B 817 ELVEKLFLFKQYNACMQLIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTT 868 (1139)
T ss_dssp HHHHHHHHHSCTTHHHHHHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHTC
T ss_pred HHHHHHHHhhhHHHHHHHhhhccCCcHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 4566777888888888888888886322345677888888888888888776
No 255
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=29.55 E-value=27 Score=20.17 Aligned_cols=43 Identities=12% Similarity=0.140 Sum_probs=24.1
Q ss_pred HHHhccHHHHHHHHHHhCCHHHHHHHHhhCCCC---CchHHHHHHHHH
Q psy11102 12 YEKCHCYEKLISVYTELGDFEALESCARKLPDS---SPLLKPMGEIFV 56 (87)
Q Consensus 12 Y~~~~n~~k~ie~~~~~ed~d~L~~l~~~L~~~---~~lL~~ia~~F~ 56 (87)
.-.+|+++.++.+|... .+.|...++.-++. ..+-.+|.+++.
T Consensus 23 ~D~~g~y~eAl~~Y~~a--ie~l~~a~k~e~~~~~k~~l~~k~~eYl~ 68 (85)
T 2v6x_A 23 LDTATQYEEAYTAYYNG--LDYLMLALKYEKNPKSKDLIRAKFTEYLN 68 (85)
T ss_dssp HHHTTCHHHHHHHHHHH--HHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHH--HHHHHHHHHhCCCHHHHHHHHHHHHHHHH
Confidence 35679999999988754 33445555444431 123444554443
No 256
>1ify_A HHR23A, UV excision repair protein RAD23 homolog A; ubiquitin associated domain, UBA domain, ubiquitin proteosome pathway, DNA binding protein; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=29.22 E-value=65 Score=16.77 Aligned_cols=36 Identities=14% Similarity=0.137 Sum_probs=22.6
Q ss_pred HHHHHHhCCCh-HHHHHHHHhc-CCHHHHHHHHhhcCC
Q psy11102 51 MGEIFVKYGLC-EQAVYVFDKN-KHKSSQWLTVVQDKP 86 (87)
Q Consensus 51 ia~~F~~~G~~-~~Av~aylk~-gd~k~ai~~cv~~~~ 86 (87)
.-..+...|-- ++|+.|+-++ |++..|++.....-|
T Consensus 11 ~i~~L~~MGF~~~~a~~AL~~~~~n~e~A~e~L~~gip 48 (49)
T 1ify_A 11 MLTEIMSMGYERERVVAALRASYNNPHRAVEYLLTGIP 48 (49)
T ss_dssp HHHHHHHTTCCHHHHHHHHHTTTSCSHHHHHHHHHCCC
T ss_pred HHHHHHHcCCCHHHHHHHHHHhCCCHHHHHHHHHhCCC
Confidence 33455555643 4566676666 568888887665544
No 257
>1k8k_G P16, ARP2/3 complex 16 kDa subunit, P16-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: a.118.13.1 PDB: 1tyq_G* 1u2v_G* 2p9i_G* 2p9k_G* 2p9l_G 2p9n_G* 2p9p_G* 2p9s_G* 2p9u_G* 3rse_G 3dxm_G* 3dxk_G
Probab=29.19 E-value=54 Score=21.67 Aligned_cols=28 Identities=14% Similarity=0.167 Sum_probs=24.0
Q ss_pred CChHHHHHHHHhcCCHHHHHHHHhhcCC
Q psy11102 59 GLCEQAVYVFDKNKHKSSQWLTVVQDKP 86 (87)
Q Consensus 59 G~~~~Av~aylk~gd~k~ai~~cv~~~~ 86 (87)
|.-+..|+.+++.|++..|+.++.+.-|
T Consensus 36 ~p~~~qv~~lL~~g~~~~ALk~~L~~pP 63 (151)
T 1k8k_G 36 GPDEGEVDSCLRQGNMTAALQAALKNPP 63 (151)
T ss_dssp CCCHHHHHHHHHTTCHHHHHHHHTSSCC
T ss_pred CCCHHHHHHHHHCCCHHHHHHHHHhCCC
Confidence 4458899999999999999999987655
No 258
>2wm9_A Dedicator of cytokinesis protein 9; polymorphism, cell membrane, phosphoprotein, nucleotide-binding, alternative splicing; 2.20A {Homo sapiens} PDB: 2wmn_A* 2wmo_A*
Probab=29.18 E-value=51 Score=24.68 Aligned_cols=38 Identities=29% Similarity=0.390 Sum_probs=27.7
Q ss_pred hHHHHHHHHHHhccHHHHHHHHH-------HhCCHHHHHHHHhhC
Q psy11102 4 LVSQAREYYEKCHCYEKLISVYT-------ELGDFEALESCARKL 41 (87)
Q Consensus 4 ~w~~A~~yY~~~~n~~k~ie~~~-------~~ed~d~L~~l~~~L 41 (87)
...+|++++.+|+.+|.++++|- ..-||.+|.++-..+
T Consensus 90 ll~~ai~~f~kg~~~E~ai~~~k~L~~~ye~~~dy~~Ls~~~~~~ 134 (428)
T 2wm9_A 90 LLEQCADGLWKAERYELIADIYKLIIPIYEKRRDFERLAHLYDTL 134 (428)
T ss_dssp HHHHHHHHHHHTTCGGGHHHHHTTTHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 35789999999999998888653 456777777664433
No 259
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=29.11 E-value=1.5e+02 Score=24.03 Aligned_cols=35 Identities=17% Similarity=0.156 Sum_probs=29.5
Q ss_pred chHHHHHHHHHhCCChHHHH---------------------HHHHhcCCHHHHHHH
Q psy11102 46 PLLKPMGEIFVKYGLCEQAV---------------------YVFDKNKHKSSQWLT 80 (87)
Q Consensus 46 ~lL~~ia~~F~~~G~~~~Av---------------------~aylk~gd~k~ai~~ 80 (87)
.+|..-++++.+.|.++-|. ++|++.||++.|+=+
T Consensus 338 ~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLt 393 (754)
T 4gns_B 338 DLLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFA 393 (754)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHH
Confidence 48888899999999988774 579999999998744
No 260
>3i4r_B Nuclear pore complex protein NUP133; protein transport, structural protein, kinetochore, mRNA transport, nucleus, phosphoprotein, translocation; 3.53A {Homo sapiens}
Probab=27.34 E-value=25 Score=28.17 Aligned_cols=68 Identities=7% Similarity=0.042 Sum_probs=39.6
Q ss_pred HHhccHHHHHHHHHHhCCHHHHHHHHhhCCCCCchHHHHHHHHHhCCChHH---HHHHHHhcCCHHHHHHHHhhc
Q psy11102 13 EKCHCYEKLISVYTELGDFEALESCARKLPDSSPLLKPMGEIFVKYGLCEQ---AVYVFDKNKHKSSQWLTVVQD 84 (87)
Q Consensus 13 ~~~~n~~k~ie~~~~~ed~d~L~~l~~~L~~~~~lL~~ia~~F~~~G~~~~---Av~aylk~gd~k~ai~~cv~~ 84 (87)
...|.++.++.+.=+..||+.|.+++...+. ...+..+|.+-|-.+- .-+-|++.|.+...++...+.
T Consensus 339 ~~~g~~e~A~~LAEky~Df~sLv~l~e~~~~----~~rl~~Y~~kfg~~~FA~~lf~~yi~~g~~~~LL~~~~~~ 409 (644)
T 3i4r_B 339 LSLGQYLWAASLAEKYCDFDILVQMCEQTDN----QSRLQRYMTQFADQNFSDFLFRWYLEKGKRGKLLSQPISQ 409 (644)
T ss_dssp HHHSCTTTHHHHHHHTSCCHHHHHHHHHHSS----CTTHHHHHHHSCSSCHHHHTHHHHCC-------------C
T ss_pred HHCCCHHHHHHHHHHhCCHHHHHHHHHccch----HHHHHHHHHHhCcCChHHHHHHHHHHCCChhHHhcCcchh
Confidence 4567778899999999999999999987753 2467778887763333 334566778888777665443
No 261
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=27.23 E-value=31 Score=20.53 Aligned_cols=50 Identities=16% Similarity=0.196 Sum_probs=28.3
Q ss_pred HHHHHHHHHhccHHHHHHHHHHhCCHHHHHHHHhhCCCC---CchHHHHHHHHHhC
Q psy11102 6 SQAREYYEKCHCYEKLISVYTELGDFEALESCARKLPDS---SPLLKPMGEIFVKY 58 (87)
Q Consensus 6 ~~A~~yY~~~~n~~k~ie~~~~~ed~d~L~~l~~~L~~~---~~lL~~ia~~F~~~ 58 (87)
.+|++. -++||++.|+.+|... .+.|...++.-++. ..+-.+|.+++..+
T Consensus 20 ~~Ave~-D~~g~y~eAl~~Y~~A--ie~l~~alk~e~~~~~k~~l~~K~~eYl~RA 72 (93)
T 1wfd_A 20 KRAVEL-DAESRYQQALVCYQEG--IDMLLQVLKGTKESSKRCVLRTKISGYMDRA 72 (93)
T ss_dssp HHHHHH-HHTTCHHHHHHHHHHH--HHHHHHHHHTCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH-HHhCCHHHHHHHHHHH--HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Confidence 344443 6779999999998754 33455555443331 13444566655443
No 262
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=27.05 E-value=99 Score=23.01 Aligned_cols=61 Identities=13% Similarity=0.156 Sum_probs=39.6
Q ss_pred HHHHHHHHHHhCCHHHHHH----HHhhCCC--CCchH----HHHHHHHHhCCChHHHHHHHHhcCCHHHHH
Q psy11102 18 YEKLISVYTELGDFEALES----CARKLPD--SSPLL----KPMGEIFVKYGLCEQAVYVFDKNKHKSSQW 78 (87)
Q Consensus 18 ~~k~ie~~~~~ed~d~L~~----l~~~L~~--~~~lL----~~ia~~F~~~G~~~~Av~aylk~gd~k~ai 78 (87)
..|++..|+..|+|.+.-+ +.+.+.. +..+| .--..+....|....+..+|.++..+..+|
T Consensus 102 ~~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai 172 (394)
T 3txn_A 102 EARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAI 172 (394)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccC
Confidence 3478888888888888544 4444333 12222 233566778888899998888876655554
No 263
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=27.02 E-value=60 Score=23.86 Aligned_cols=49 Identities=6% Similarity=-0.147 Sum_probs=25.1
Q ss_pred HHHHHHhCCHHHHHHHHhhC----CC-CCchH-----HHHHHHHHhCCChHHHHHHHHh
Q psy11102 22 ISVYTELGDFEALESCARKL----PD-SSPLL-----KPMGEIFVKYGLCEQAVYVFDK 70 (87)
Q Consensus 22 ie~~~~~ed~d~L~~l~~~L----~~-~~~lL-----~~ia~~F~~~G~~~~Av~aylk 70 (87)
|+++...+||+.+...+..+ .+ +++.+ .-.|.+....+.+..|...|+-
T Consensus 175 irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~lk~~~gl~~l~~r~f~~Aa~~f~e 233 (429)
T 4b4t_R 175 ARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNRYKTYYGIHCLAVRNFKEAAKLLVD 233 (429)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHHHHHHHHHGGGGTSCHHHHHHHHHH
T ss_pred HHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHHHhChHHHHHHHHHH
Confidence 33444567777766665554 12 22221 2234444556666666666653
No 264
>2dkz_A Hypothetical protein LOC64762; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.00 E-value=62 Score=19.48 Aligned_cols=27 Identities=22% Similarity=0.337 Sum_probs=23.2
Q ss_pred Cch-HHHHHHHHHhCCChHHHHHHHHhc
Q psy11102 45 SPL-LKPMGEIFVKYGLCEQAVYVFDKN 71 (87)
Q Consensus 45 ~~l-L~~ia~~F~~~G~~~~Av~aylk~ 71 (87)
+.+ +.+.+..++..|+.+.+|++|.+-
T Consensus 16 s~lSv~EVs~~Lr~igL~e~vv~~F~~e 43 (84)
T 2dkz_A 16 SGLSIEEVSKSLRFIGLSEDVISFFVTE 43 (84)
T ss_dssp SSCCHHHHHHHGGGTCCCHHHHHHHHTT
T ss_pred hhcCHHHHHHHHHHcCCcHHHHHHHHHH
Confidence 444 789999999999999999999764
No 265
>2dla_A 397AA long hypothetical protein; helix bundle, twisted beta-sheet, replication; 2.90A {Pyrococcus horikoshii}
Probab=26.55 E-value=26 Score=24.57 Aligned_cols=39 Identities=18% Similarity=0.294 Sum_probs=26.0
Q ss_pred HHHHHHHHHHh--ccHHHHHHHHHHhCCHHHHHHHHhhCCCC-CchHHHHH
Q psy11102 5 VSQAREYYEKC--HCYEKLISVYTELGDFEALESCARKLPDS-SPLLKPMG 52 (87)
Q Consensus 5 w~~A~~yY~~~--~n~~k~ie~~~~~ed~d~L~~l~~~L~~~-~~lL~~ia 52 (87)
|+.+....+++ +|++|+++++|..-| .||+- +.++.++.
T Consensus 166 ~e~li~lW~KAFEkN~EkaVN~LYEiRd---------ELPefY~~l~~~l~ 207 (222)
T 2dla_A 166 REDLIRIWSKAFERNVERGVNMLYEIRD---------ELPEFYRKVLGEIQ 207 (222)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSSSTT---------SCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HhHHHHHHHHHHHH
Confidence 45555555555 799999999997665 56663 55544443
No 266
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=26.50 E-value=1.7e+02 Score=20.62 Aligned_cols=44 Identities=5% Similarity=0.208 Sum_probs=32.4
Q ss_pred HHHHHHHHh-hCCCCCchHHHHHHHHHhCCChHHHHHHHHhcCCHHHHHHHHh
Q psy11102 31 FEALESCAR-KLPDSSPLLKPMGEIFVKYGLCEQAVYVFDKNKHKSSQWLTVV 82 (87)
Q Consensus 31 ~d~L~~l~~-~L~~~~~lL~~ia~~F~~~G~~~~Av~aylk~gd~k~ai~~cv 82 (87)
|..-.+++. .||..||+-..++--| +|--|.-.|++..|+.++-
T Consensus 154 Y~~A~~iA~~~L~pthPirLGLaLNf--------SVFyYEIln~~~~Ac~lAk 198 (248)
T 3uzd_A 154 YSEAHEISKEHMQPTHPIRLGLALNY--------SVFYYEIQNAPEQACHLAK 198 (248)
T ss_dssp HHHHHHHHHHHSCTTCHHHHHHHHHH--------HHHHHHTSCCHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCCCcHHHHHHHHH--------HHHHHHHcCCHHHHHHHHH
Confidence 344444554 6999999876666655 7888888999998888764
No 267
>2knz_A Ubiquilin-4; cytoplasm, endoplasmic reticulum, nucleus, phosphoprotein, protein binding; NMR {Mus musculus}
Probab=26.20 E-value=80 Score=16.69 Aligned_cols=39 Identities=10% Similarity=0.037 Sum_probs=27.5
Q ss_pred HHHHHHHHhCCC--hHHHHHHHHhcC-CHHHHHHHHhhcCCC
Q psy11102 49 KPMGEIFVKYGL--CEQAVYVFDKNK-HKSSQWLTVVQDKPS 87 (87)
Q Consensus 49 ~~ia~~F~~~G~--~~~Av~aylk~g-d~k~ai~~cv~~~~~ 87 (87)
..--..+...|- -+.++.|+.++| |+..|++.-.+.-||
T Consensus 12 ~~~l~~L~~MGF~~~~~~~~AL~~t~gnve~Ave~L~~~~~s 53 (53)
T 2knz_A 12 QQQLEQLNSMGFINREANLQALIATGGDINAAIERLLGSQLS 53 (53)
T ss_dssp HHHHHHHHTTTCCCHHHHHHHHHHHTSCHHHHHHHHHHCCCC
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHhCCCHHHHHHHHHHcCCC
Confidence 334466777786 455677777665 699999988777665
No 268
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=25.41 E-value=90 Score=23.24 Aligned_cols=42 Identities=12% Similarity=0.271 Sum_probs=28.2
Q ss_pred HHHHHHHHHHhCCHHHHHHHHhhC-------CCC--CchHHHHHHHHHhCC
Q psy11102 18 YEKLISVYTELGDFEALESCARKL-------PDS--SPLLKPMGEIFVKYG 59 (87)
Q Consensus 18 ~~k~ie~~~~~ed~d~L~~l~~~L-------~~~--~~lL~~ia~~F~~~G 59 (87)
+-++.+.|...+++++|.+++..+ |+. .+++..+-++|.+..
T Consensus 22 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~kak~~k~v~~l~~~~~~~~ 72 (394)
T 3txn_A 22 ILQQGELYKQEGKAKELADLIKVTRPFLSSISKAKAAKLVRSLVDMFLDMD 72 (394)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTTTGGGGSCHHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhcCC
Confidence 346777888888888888887665 332 366677777775543
No 269
>2dag_A Ubiquitin carboxyl-terminal hydrolase 5; isopeptidase T, ubiquitin specific protease 5 (USP 5), UBA domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.26 E-value=86 Score=17.85 Aligned_cols=24 Identities=4% Similarity=-0.141 Sum_probs=18.8
Q ss_pred HHHHHHHHhcC--CHHHHHHHHhhcC
Q psy11102 62 EQAVYVFDKNK--HKSSQWLTVVQDK 85 (87)
Q Consensus 62 ~~Av~aylk~g--d~k~ai~~cv~~~ 85 (87)
++|+.|+..++ +++.|++-..++-
T Consensus 24 ~~a~~AL~~t~n~~ve~A~ewL~~~~ 49 (74)
T 2dag_A 24 DACRKAVYYTGNSGAEAAMNWVMSHM 49 (74)
T ss_dssp HHHHHHHHHHTSCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHhCC
Confidence 67788888886 5999999887754
No 270
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=24.13 E-value=1.9e+02 Score=25.06 Aligned_cols=20 Identities=0% Similarity=-0.137 Sum_probs=9.5
Q ss_pred HHHHHHHHHhCCHHHHHHHH
Q psy11102 19 EKLISVYTELGDFEALESCA 38 (87)
Q Consensus 19 ~k~ie~~~~~ed~d~L~~l~ 38 (87)
.-+|++|++.|+.+.-.++.
T Consensus 131 naLIdglcK~G~leeA~~Lf 150 (1134)
T 3spa_A 131 LAFFKCCLLTDQLPLAHHLL 150 (1134)
T ss_dssp HHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHH
Confidence 34445555555554444443
No 271
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=24.04 E-value=78 Score=16.44 Aligned_cols=25 Identities=24% Similarity=0.298 Sum_probs=20.1
Q ss_pred cHHHHHHHHHHhCCHHHHHHHHhhC
Q psy11102 17 CYEKLISVYTELGDFEALESCARKL 41 (87)
Q Consensus 17 n~~k~ie~~~~~ed~d~L~~l~~~L 41 (87)
.+|+.|...+..|||+....|-..|
T Consensus 12 aiEQqiyvA~seGd~etv~~Le~QL 36 (40)
T 1gp8_A 12 AIRKQMDAAASKGDVETYRKLKAKL 36 (40)
T ss_dssp HHHHHHHHHHTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 4678899999999999877665554
No 272
>3bqo_A Telomeric repeat-binding factor 1; TRF1 TRFH domain dimerization domain TIN2, ADP-ribosylation, alternative splicing, cell cycle, cell division; 2.00A {Homo sapiens} SCOP: a.146.1.1 PDB: 3l82_A 1h6o_A
Probab=23.90 E-value=63 Score=22.60 Aligned_cols=24 Identities=17% Similarity=-0.033 Sum_probs=20.2
Q ss_pred ChHHHHHHHHhcCCHHHHHHHHhh
Q psy11102 60 LCEQAVYVFDKNKHKSSQWLTVVQ 83 (87)
Q Consensus 60 ~~~~Av~aylk~gd~k~ai~~cv~ 83 (87)
.-+|||-.+++.|.++.|...--+
T Consensus 119 lk~qAV~VCiekg~Fk~A~eiLkr 142 (211)
T 3bqo_A 119 IKIQAIAVCMENGNFKEAEEVFER 142 (211)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHccchHHHHHHHHH
Confidence 347999999999999999876543
No 273
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=23.64 E-value=2e+02 Score=20.46 Aligned_cols=44 Identities=16% Similarity=0.283 Sum_probs=32.2
Q ss_pred HHHHHHHH-hhCCCCCchHHHHHHHHHhCCChHHHHHHHHhcCCHHHHHHHHh
Q psy11102 31 FEALESCA-RKLPDSSPLLKPMGEIFVKYGLCEQAVYVFDKNKHKSSQWLTVV 82 (87)
Q Consensus 31 ~d~L~~l~-~~L~~~~~lL~~ia~~F~~~G~~~~Av~aylk~gd~k~ai~~cv 82 (87)
|+.-.+++ ..||..||+-..++--| +|--|.-.|++..|+.++-
T Consensus 179 Y~~A~~iA~~~L~pThPirLGLaLNf--------SVFyYEIln~p~~Ac~LAk 223 (261)
T 3ubw_A 179 YKAASDIAMTELPPTHPIRLGLALNF--------SVFYYEILNSPDRACRLAK 223 (261)
T ss_dssp HHHHHHHHHHHSCTTCHHHHHHHHHH--------HHHHHHTSCCHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCCCcHHHHHHHHH--------HHHHHHHcCCHHHHHHHHH
Confidence 33334454 46999999877777655 7888888899988888764
No 274
>3a7m_A Flagellar protein FLIT; UP-DOWN helix bundle, bacterial flagellum biogenesis, chaper cytoplasm, repressor, transcription; 3.20A {Salmonella typhimurium}
Probab=23.00 E-value=1.1e+02 Score=19.02 Aligned_cols=30 Identities=7% Similarity=0.129 Sum_probs=22.1
Q ss_pred HHHHHHHhccHHHHHHHHHHhCCHHHHHHH
Q psy11102 8 AREYYEKCHCYEKLISVYTELGDFEALESC 37 (87)
Q Consensus 8 A~~yY~~~~n~~k~ie~~~~~ed~d~L~~l 37 (87)
-...|.+--.....+=...+.||||.|.++
T Consensus 7 ll~~Yq~i~~lS~~ML~aA~~gdWD~Lv~l 36 (122)
T 3a7m_A 7 FINRWQRIALLSQSLLELAQRGEWDLLLQQ 36 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
Confidence 355677766677777777888999988765
No 275
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=22.92 E-value=1.3e+02 Score=21.13 Aligned_cols=26 Identities=15% Similarity=0.231 Sum_probs=16.0
Q ss_pred chHHHHHHHHHhCCChHHHHHHHHhc
Q psy11102 46 PLLKPMGEIFVKYGLCEQAVYVFDKN 71 (87)
Q Consensus 46 ~lL~~ia~~F~~~G~~~~Av~aylk~ 71 (87)
-.|.-+|+.+...|..+.|+++|.++
T Consensus 259 ~al~~la~~~~~~~~~~~A~~~~~~l 284 (306)
T 3dra_A 259 FALETLAKIYTQQKKYNESRTVYDLL 284 (306)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCCHHHHHHHHHHH
Confidence 45666666666666666666666554
No 276
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=22.70 E-value=2.3e+02 Score=20.75 Aligned_cols=50 Identities=16% Similarity=0.151 Sum_probs=31.6
Q ss_pred CHHHHHHHHhhCCCCC----chHHHHHHHHHhCC--------ChHHHHHHHHhcCCHHHHHH
Q psy11102 30 DFEALESCARKLPDSS----PLLKPMGEIFVKYG--------LCEQAVYVFDKNKHKSSQWL 79 (87)
Q Consensus 30 d~d~L~~l~~~L~~~~----~lL~~ia~~F~~~G--------~~~~Av~aylk~gd~k~ai~ 79 (87)
..+.|.+|.+.+|... .++..+-.|-.+.| ++.-.-+.|.+-|++..|-.
T Consensus 96 ~~~rL~~L~~~~~~~~p~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~ig~~~~~e~~~~~Ae~ 157 (336)
T 3lpz_A 96 SRGKLLGCLRLFQPGEPVRKRFVKEMIDWSKKFGDYPAGDPELHHVVGTLYVEEGEFEAAEK 157 (336)
T ss_dssp HHHHHHHHHTTSCTTCHHHHHHHHHHHHHHHHHSSCTTCCHHHHHHHHHHHHHTTCHHHHHH
T ss_pred HHHHHHHHHHhCCCCCcHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHccCCHHHHHH
Confidence 4566777777777532 45666666666655 34445677777777776644
No 277
>3o5t_A Dinitrogenase reductase activacting glicohydrolas; ADP binding, hydrolase-transcription complex; HET: ADP; 2.09A {Azospirillum brasilense} SCOP: a.209.1.0 PDB: 3g9d_A*
Probab=22.65 E-value=74 Score=22.20 Aligned_cols=24 Identities=8% Similarity=0.065 Sum_probs=21.0
Q ss_pred hHHHHHHHHhcCCHHHHHHHHhhc
Q psy11102 61 CEQAVYVFDKNKHKSSQWLTVVQD 84 (87)
Q Consensus 61 ~~~Av~aylk~gd~k~ai~~cv~~ 84 (87)
.+.|+.+|++.++++.+|..+|++
T Consensus 217 l~~Al~~~l~~~~f~~ai~~avn~ 240 (297)
T 3o5t_A 217 MQTVMHYYFQTDSVESCVVETVNQ 240 (297)
T ss_dssp HHHHHHHHHHCSSHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCCHHHHHHHHHhc
Confidence 457888999999999999999886
No 278
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=22.51 E-value=1.4e+02 Score=21.49 Aligned_cols=37 Identities=22% Similarity=0.245 Sum_probs=21.6
Q ss_pred chHHHHHHHHHhCCChHHHHHH-------HHhcCCHHHHHHHHh
Q psy11102 46 PLLKPMGEIFVKYGLCEQAVYV-------FDKNKHKSSQWLTVV 82 (87)
Q Consensus 46 ~lL~~ia~~F~~~G~~~~Av~a-------ylk~gd~k~ai~~cv 82 (87)
..+..++..+.+.+.+++|++. +++.|+..+|.|+|+
T Consensus 34 Q~~Rtl~~Ry~~~~~~~eAidlL~~ga~~ll~~~Q~~sa~DLa~ 77 (312)
T 2wpv_A 34 QTLRTIANRYVRSKSYEHAIELISQGALSFLKAKQGGSGTDLIF 77 (312)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHCCCcchHHHHHH
Confidence 4455556666666666665543 456666666666653
No 279
>3qil_A Clathrin heavy chain 1; clathrin trimerization domain, endocytosis, structural prote; 3.92A {Bos taurus}
Probab=22.41 E-value=1.1 Score=29.26 Aligned_cols=53 Identities=15% Similarity=0.097 Sum_probs=32.9
Q ss_pred chhHHHHHHHHHHhccHHHHHHHHHHhCCHHHHHHHHhhCCCCCchHHHHHHHHHhCCChHHHHHHH
Q psy11102 2 TTLVSQAREYYEKCHCYEKLISVYTELGDFEALESCARKLPDSSPLLKPMGEIFVKYGLCEQAVYVF 68 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n~~k~ie~~~~~ed~d~L~~l~~~L~~~~~lL~~ia~~F~~~G~~~~Av~ay 68 (87)
+++|.+|++++.+-+-+..||++...-+ +.++-+++=++|...|.-|-=+.+.
T Consensus 19 N~rw~qSI~L~KkDkLykDAietAa~S~--------------d~elaEeLL~yFVe~g~kEcF~A~L 71 (125)
T 3qil_A 19 SHMWKQSVELAKKDSLYKDAMQYASESK--------------DTELAEELLQWFLQEEKRECFGACL 71 (125)
T ss_dssp CCCCSSCCCCCSCCCCSSHHHHTTTSSC--------------CSHHHHHHHHHHTTSCSHHHHHHHH
T ss_pred cccHHHHHHHHHhcccHHHHHHHHHHcC--------------CHHHHHHHHHHHHHcCchHHHHHHH
Confidence 3566666666666666666666554333 3466667778888888766444333
No 280
>1whc_A RSGI RUH-027, UBA/UBX 33.3 kDa protein; UBA domain, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Mus musculus} SCOP: a.5.2.1
Probab=22.18 E-value=1.1e+02 Score=16.82 Aligned_cols=33 Identities=9% Similarity=0.069 Sum_probs=23.9
Q ss_pred HHHHhCC-ChHHHHHHHHhc--CCHHHHHHHHhhcC
Q psy11102 53 EIFVKYG-LCEQAVYVFDKN--KHKSSQWLTVVQDK 85 (87)
Q Consensus 53 ~~F~~~G-~~~~Av~aylk~--gd~k~ai~~cv~~~ 85 (87)
..+...| --++|+.|+..+ ++++.|++-..++-
T Consensus 14 ~~L~~MGF~~~~a~~AL~~t~~~nve~A~ewLl~~~ 49 (64)
T 1whc_A 14 ESLIEMGFPRGRAEKALALTGNQGIEAAMDWLMEHE 49 (64)
T ss_dssp HHHHTTTCCHHHHHHHHHHHTSCCHHHHHHHHHHHT
T ss_pred HHHHHcCCCHHHHHHHHHHhcCCCHHHHHHHHHhCC
Confidence 4455566 347788888888 58999999877654
No 281
>1z2z_A Probable tRNA pseudouridine synthase D; alpha-beta protein., structural genomics, PSI, protein structure initiative; 2.60A {Methanosarcina mazei}
Probab=22.05 E-value=2.5e+02 Score=20.98 Aligned_cols=40 Identities=13% Similarity=0.019 Sum_probs=27.0
Q ss_pred chhHHHHHHHHHHh------ccHHHHHHHHHHhCCHHHHHHHHhhCCCC
Q psy11102 2 TTLVSQAREYYEKC------HCYEKLISVYTELGDFEALESCARKLPDS 44 (87)
Q Consensus 2 ~~~w~~A~~yY~~~------~n~~k~ie~~~~~ed~d~L~~l~~~L~~~ 44 (87)
.++|+.|+..|... ....++.+.+...+||++- .+.+|..
T Consensus 191 ~g~~~~Av~lil~~~~~~e~~~~~~ar~~~~~~gd~~~a---l~~~p~~ 236 (446)
T 1z2z_A 191 EGNFEKAALLYIAEPFPEEPEETKNARQFVKDTLDFKEG---LKTYPLR 236 (446)
T ss_dssp HTCHHHHHHHHHSCCCTTSCTTHHHHHHHHHHHCCHHHH---HHHSCTT
T ss_pred cCCHHHHHHHHhcCCCcccCHHHHHHHHHHHHcCCHHHH---HHHCcch
Confidence 36889999888742 3456677777788888754 3456654
No 282
>3efd_K KCSA; helix bundle, C-terminus, immune system; 2.60A {Escherichia coli}
Probab=21.94 E-value=78 Score=15.29 Aligned_cols=13 Identities=23% Similarity=0.215 Sum_probs=9.9
Q ss_pred HhCCHHHHHHHHh
Q psy11102 27 ELGDFEALESCAR 39 (87)
Q Consensus 27 ~~ed~d~L~~l~~ 39 (87)
.++.||.||++.+
T Consensus 16 LHeRFDRLEr~ld 28 (30)
T 3efd_K 16 LHERFDRLERMLD 28 (30)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhc
Confidence 3577999998764
No 283
>4dbg_B Ring finger protein 31; ubiquitin fold, ubiquitination, ligase; 2.71A {Homo sapiens}
Probab=21.86 E-value=74 Score=21.37 Aligned_cols=26 Identities=12% Similarity=0.162 Sum_probs=21.5
Q ss_pred ChHHHHHHHHhc-CCHHHHHHHHhhcC
Q psy11102 60 LCEQAVYVFDKN-KHKSSQWLTVVQDK 85 (87)
Q Consensus 60 ~~~~Av~aylk~-gd~k~ai~~cv~~~ 85 (87)
-+++|.+|.+.. ||+..|+.-|++.+
T Consensus 76 s~~EAr~Aw~~~~Gd~~~Av~~ci~~R 102 (162)
T 4dbg_B 76 SCQEARRAWLDRHGNLDEAVEECVRTR 102 (162)
T ss_dssp CHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHccCChHHHHHHHHHHH
Confidence 368899998655 89999999999864
No 284
>3o10_A Sacsin; all-helical domain, homodimerization, chaperone; 1.90A {Homo sapiens}
Probab=21.50 E-value=52 Score=20.78 Aligned_cols=32 Identities=9% Similarity=-0.086 Sum_probs=26.1
Q ss_pred chhHHHHHHHHHHhccHHHHHHHHHHhCCHHH
Q psy11102 2 TTLVSQAREYYEKCHCYEKLISVYTELGDFEA 33 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~n~~k~ie~~~~~ed~d~ 33 (87)
+++.+.|..++.++...-+.++.....|+|+.
T Consensus 3 ~~~~ee~~~wl~~A~~dl~~A~~~~~~g~y~~ 34 (141)
T 3o10_A 3 VGNPVEARRWLRQARANFSAARNDLHKNANEW 34 (141)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHGGGTTTTCHHH
T ss_pred CCChHHHHHHHHHHHhhhhHHhhHHhhCccce
Confidence 45788888999999888888888888888764
No 285
>2bn5_A PSI; nuclear protein, splicing, protein-protein interaction, structure, proline-rich peptide; NMR {Drosophila melanogaster} PDB: 2bn6_A
Probab=21.50 E-value=43 Score=16.78 Aligned_cols=15 Identities=27% Similarity=0.344 Sum_probs=12.0
Q ss_pred HHHHHHHhCCChHHH
Q psy11102 50 PMGEIFVKYGLCEQA 64 (87)
Q Consensus 50 ~ia~~F~~~G~~~~A 64 (87)
+-+++.++.|+.++|
T Consensus 7 QW~eYYrsiG~~~eA 21 (33)
T 2bn5_A 7 QWAEYYRSVGKIEEA 21 (33)
T ss_dssp HHHHHHHHHTCHHHH
T ss_pred HHHHHHHHcccHHHH
Confidence 557888999998876
No 286
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=21.38 E-value=2.3e+02 Score=20.33 Aligned_cols=35 Identities=9% Similarity=-0.049 Sum_probs=21.0
Q ss_pred HHHHHHHHHhCCChHHHHHHHHhcC--CHHHHHHHHh
Q psy11102 48 LKPMGEIFVKYGLCEQAVYVFDKNK--HKSSQWLTVV 82 (87)
Q Consensus 48 L~~ia~~F~~~G~~~~Av~aylk~g--d~k~ai~~cv 82 (87)
=..+|..|.+.|....|..-|+... +++...++.+
T Consensus 137 H~~~a~~~~~e~~~~~A~~H~i~~~~~s~~~~a~~l~ 173 (312)
T 2wpv_A 137 HNTIGSKLLEGDFVYEAERYFMLGTHDSMIKYVDLLW 173 (312)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcCCHHHHHHHHHhCCCccHHHHHHHHH
Confidence 3455666666667777777777544 3555555443
No 287
>3h3m_A Flagellar protein FLIT; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, flagellum; 2.50A {Bordetella bronchiseptica}
Probab=21.17 E-value=1.3e+02 Score=18.94 Aligned_cols=29 Identities=7% Similarity=0.114 Sum_probs=21.3
Q ss_pred HHHHHHhccHHHHHHHHHHhCCHHHHHHH
Q psy11102 9 REYYEKCHCYEKLISVYTELGDFEALESC 37 (87)
Q Consensus 9 ~~yY~~~~n~~k~ie~~~~~ed~d~L~~l 37 (87)
...|.+--....-+=.+.+.||||.|..+
T Consensus 21 l~~Yq~Il~lS~~ML~aA~~gdWD~Lv~l 49 (126)
T 3h3m_A 21 LEIYQDIANLTSRMLAAANASNWDLVLNH 49 (126)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCcHHHHHHH
Confidence 45677766677777777788888888765
No 288
>2cpw_A CBL-interacting protein STS-1 variant; ubiquitin associated domain, UBA, compact three helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=21.15 E-value=1.1e+02 Score=16.84 Aligned_cols=23 Identities=4% Similarity=-0.067 Sum_probs=18.4
Q ss_pred HHHHHHHHhcC--CHHHHHHHHhhc
Q psy11102 62 EQAVYVFDKNK--HKSSQWLTVVQD 84 (87)
Q Consensus 62 ~~Av~aylk~g--d~k~ai~~cv~~ 84 (87)
++|+.|+..++ +++.|++-..++
T Consensus 34 ~~a~~AL~~t~~~nve~A~ewL~~~ 58 (64)
T 2cpw_A 34 ARAQKALASTGGRSVQTACDWLFSH 58 (64)
T ss_dssp HHHHHHHHHTTTSCHHHHHHHHHSC
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHhC
Confidence 67888888886 799999887664
No 289
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=21.11 E-value=2.6e+02 Score=20.69 Aligned_cols=42 Identities=26% Similarity=0.325 Sum_probs=25.5
Q ss_pred HHhhCCCCCchHHHHHHHHHhCCChHHHHHHHHhcCCHHHHH
Q psy11102 37 CARKLPDSSPLLKPMGEIFVKYGLCEQAVYVFDKNKHKSSQW 78 (87)
Q Consensus 37 l~~~L~~~~~lL~~ia~~F~~~G~~~~Av~aylk~gd~k~ai 78 (87)
.+...|+...+...-+++..+.|..+.|...|.++-......
T Consensus 346 al~~~~~~~~~~~~yid~e~~~~~~~~aR~l~er~~k~~~lw 387 (493)
T 2uy1_A 346 GLLKHPDSTLLKEEFFLFLLRIGDEENARALFKRLEKTSRMW 387 (493)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHSCCBHHHH
T ss_pred HHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 334455544555556777777788888777777764333333
No 290
>2npu_A FKBP12-rapamycin complex-associated protein; four-helix bundle, transferase; NMR {Homo sapiens}
Probab=21.07 E-value=1.7e+02 Score=18.57 Aligned_cols=68 Identities=12% Similarity=0.165 Sum_probs=37.6
Q ss_pred HHHHHHHHHhccHHHHHHHHHHhCCHHHHHHHHhhCCCC---CchHHHHHHHHHhCCChHHHHHHHHhcCCHH---HHHH
Q psy11102 6 SQAREYYEKCHCYEKLISVYTELGDFEALESCARKLPDS---SPLLKPMGEIFVKYGLCEQAVYVFDKNKHKS---SQWL 79 (87)
Q Consensus 6 ~~A~~yY~~~~n~~k~ie~~~~~ed~d~L~~l~~~L~~~---~~lL~~ia~~F~~~G~~~~Av~aylk~gd~k---~ai~ 79 (87)
+.|..+|-.-+|.++.++.+-.+ .+.| ..=|+. ......-|.-+ ....++++-|.+.||.. .|.+
T Consensus 44 eeASrlyf~~~n~~~m~~~L~pL--h~~l----~~~PeT~~E~sF~~~fG~~L---~~A~~~~~~y~~t~d~~~lnqAWd 114 (126)
T 2npu_A 44 EEASRLYFGERNVKGMFEVLEPL--HAMM----ERGPQTLKETSFNQAYGRDL---MEAQEWCRKYMKSGNVKDLTQAWD 114 (126)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHH--HHHH----HHSCCCHHHHHHHHHHHHHH---HHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHHhcccCHHHHHHHHHHH--HHHH----ccCCCCHHHHHHHHHHhHHH---HHHHHHHHHHHHhCChhHHHHHHH
Confidence 46666776667777776666332 2222 223443 13344444444 34566777777788775 5666
Q ss_pred HHh
Q psy11102 80 TVV 82 (87)
Q Consensus 80 ~cv 82 (87)
.+.
T Consensus 115 ~Y~ 117 (126)
T 2npu_A 115 LYY 117 (126)
T ss_dssp HHH
T ss_pred HHH
Confidence 553
No 291
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=20.79 E-value=2e+02 Score=24.30 Aligned_cols=54 Identities=15% Similarity=0.088 Sum_probs=42.4
Q ss_pred HHHHHHHHHHhc--cHHHHHHHHHHhCCHHHHHHHHhhCCC-CCch-HHHHHHHHHhC
Q psy11102 5 VSQAREYYEKCH--CYEKLISVYTELGDFEALESCARKLPD-SSPL-LKPMGEIFVKY 58 (87)
Q Consensus 5 w~~A~~yY~~~~--n~~k~ie~~~~~ed~d~L~~l~~~L~~-~~~l-L~~ia~~F~~~ 58 (87)
..-+.+.|.+-. ++-.+..|+.+++|.+...++..+|-+ ++++ =.+||-.+...
T Consensus 218 Lr~l~~Iy~k~~~~dy~~a~~~ai~LnD~~li~~if~~l~~~~d~l~ayQiAFdL~~~ 275 (963)
T 4ady_A 218 LRKSFDFLMNMPNCDYLTLNKVVVNLNDAGLALQLFKKLKEENDEGLSAQIAFDLVSS 275 (963)
T ss_dssp HHHHHHHHHHSSSCCHHHHHHHHHHHTCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCchhHHHHHHHHHHcCCHHHHHHHHHHHHhcccHHHHHHHHHHHhcc
Confidence 456888999987 899999999999999999999999853 3443 45666666553
No 292
>3v1a_A Computational design, MID1-APO1; helix-turn-helix, metal binding, homodimer, de novo protein, binding protein; 0.98A {Artificial gene} PDB: 3v1b_A* 3v1c_A* 3v1d_A* 3v1f_A* 3v1e_A
Probab=20.73 E-value=1.1e+02 Score=16.39 Aligned_cols=34 Identities=9% Similarity=0.165 Sum_probs=29.1
Q ss_pred HHHHHhccHHHHHHHHHHhCCHHHHHHHHhhCCC
Q psy11102 10 EYYEKCHCYEKLISVYTELGDFEALESCARKLPD 43 (87)
Q Consensus 10 ~yY~~~~n~~k~ie~~~~~ed~d~L~~l~~~L~~ 43 (87)
.+..|..+.+..|+-.-..+.||+..-|-++|.+
T Consensus 5 PL~EQ~~~I~~~I~qAk~~rRfdEV~~L~~NL~E 38 (48)
T 3v1a_A 5 PLAQQIKNIHSFIHQAKAAGRMDEVRTLQENLHQ 38 (48)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHH
Confidence 4677888889999999999999999999888754
No 293
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=20.65 E-value=47 Score=20.66 Aligned_cols=27 Identities=15% Similarity=0.285 Sum_probs=17.6
Q ss_pred HHHhccHHHHHHHHHHhCCHHHHHHHHhh
Q psy11102 12 YEKCHCYEKLISVYTELGDFEALESCARK 40 (87)
Q Consensus 12 Y~~~~n~~k~ie~~~~~ed~d~L~~l~~~ 40 (87)
.-.+|+++.|+.+|... .+.|...++.
T Consensus 28 ~D~ag~y~eAl~lY~~A--ie~l~~alk~ 54 (117)
T 2cpt_A 28 EDKAGNYEEALQLYQHA--VQYFLHVVKY 54 (117)
T ss_dssp HHHHTCHHHHHHHHHHH--HHHHHHHHHT
T ss_pred HHHccCHHHHHHHHHHH--HHHHHHHHHh
Confidence 35679999999998754 2334444443
No 294
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=20.58 E-value=2.9e+02 Score=23.88 Aligned_cols=41 Identities=17% Similarity=0.212 Sum_probs=27.9
Q ss_pred chhHHHHHHHHHHhc------------cHHHHHHHHHHhCCHHHHHHHHhhCC
Q psy11102 2 TTLVSQAREYYEKCH------------CYEKLISVYTELGDFEALESCARKLP 42 (87)
Q Consensus 2 ~~~w~~A~~yY~~~~------------n~~k~ie~~~~~ed~d~L~~l~~~L~ 42 (87)
.|++++|.+++..-. -|.-+|+.|++.|.+++-.++.+...
T Consensus 140 ~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~ 192 (1134)
T 3spa_A 140 TDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVK 192 (1134)
T ss_dssp HTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 356777777774311 15567777888888888888877763
No 295
>3dwl_G Actin-related protein 2/3 complex subunit 5; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=20.23 E-value=63 Score=21.37 Aligned_cols=25 Identities=8% Similarity=-0.084 Sum_probs=21.1
Q ss_pred HHHHHHHHhcCCHHHHHHHHhhcCC
Q psy11102 62 EQAVYVFDKNKHKSSQWLTVVQDKP 86 (87)
Q Consensus 62 ~~Av~aylk~gd~k~ai~~cv~~~~ 86 (87)
+.-|+.+++.|++..|+.++.+.=|
T Consensus 40 ~~qvr~lL~~g~~~~ALk~aL~~pP 64 (152)
T 3dwl_G 40 IPQARSAIQTGNALQGLKTLLSYVP 64 (152)
T ss_dssp HHHHHHHHHHSCCHHHHHHHTSSCC
T ss_pred HHHHHHHHHCCCHHHHHHHHHhCCC
Confidence 6778999999999999999877544
No 296
>3pbp_C Nucleoporin NUP159; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_B
Probab=20.09 E-value=63 Score=16.46 Aligned_cols=12 Identities=25% Similarity=0.697 Sum_probs=9.5
Q ss_pred HHHHHHHHhCCC
Q psy11102 49 KPMGEIFVKYGL 60 (87)
Q Consensus 49 ~~ia~~F~~~G~ 60 (87)
.++|++|.+.-+
T Consensus 23 kQlGeffK~~~~ 34 (36)
T 3pbp_C 23 KQIGDFFKNLNM 34 (36)
T ss_dssp HHHHHHHHTTCC
T ss_pred HHHHHHHHHHHc
Confidence 579999988765
Done!