Query psy11104
Match_columns 70
No_of_seqs 141 out of 1008
Neff 5.9
Searched_HMMs 46136
Date Fri Aug 16 18:04:26 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11104.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/11104hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF00400 WD40: WD domain, G-be 99.4 3.9E-12 8.5E-17 64.6 6.2 39 4-42 1-39 (39)
2 KOG0272|consensus 99.0 2.2E-10 4.8E-15 86.1 4.7 55 12-66 343-397 (459)
3 KOG0266|consensus 99.0 2.2E-09 4.9E-14 79.6 7.0 56 11-66 243-298 (456)
4 KOG0271|consensus 98.8 3.8E-09 8.3E-14 79.3 3.5 58 10-67 153-211 (480)
5 KOG1523|consensus 98.7 8.9E-09 1.9E-13 75.7 3.0 41 2-42 134-174 (361)
6 KOG0271|consensus 98.7 2E-08 4.4E-13 75.5 3.8 54 1-54 348-407 (480)
7 KOG0263|consensus 98.7 2.2E-08 4.7E-13 78.9 4.1 46 8-53 571-616 (707)
8 KOG0295|consensus 98.7 3.8E-08 8.2E-13 73.3 5.0 54 12-65 332-385 (406)
9 KOG0285|consensus 98.6 4.8E-08 1E-12 73.1 5.2 54 4-57 141-194 (460)
10 smart00320 WD40 WD40 repeats. 98.6 8.7E-08 1.9E-12 44.3 4.2 31 12-42 10-40 (40)
11 KOG0278|consensus 98.6 5.4E-08 1.2E-12 70.4 4.8 38 10-47 263-300 (334)
12 KOG0263|consensus 98.6 4.1E-08 8.9E-13 77.4 4.2 58 9-66 530-587 (707)
13 KOG0291|consensus 98.6 7.7E-08 1.7E-12 76.7 5.5 44 12-55 348-391 (893)
14 KOG0269|consensus 98.6 6.7E-08 1.5E-12 76.9 4.7 37 11-47 217-253 (839)
15 KOG0284|consensus 98.6 2.8E-08 6E-13 74.9 2.2 56 11-66 219-274 (464)
16 KOG0283|consensus 98.5 1.1E-07 2.3E-12 75.2 5.1 42 4-45 257-298 (712)
17 PTZ00421 coronin; Provisional 98.5 2.8E-07 6.1E-12 69.8 6.6 36 11-46 72-108 (493)
18 KOG0264|consensus 98.5 1.9E-07 4E-12 70.3 5.5 59 8-66 266-326 (422)
19 cd00200 WD40 WD40 domain, foun 98.5 4.3E-07 9.2E-12 57.6 6.3 41 12-52 7-47 (289)
20 KOG0302|consensus 98.5 1.2E-07 2.6E-12 71.0 4.3 51 4-54 246-299 (440)
21 KOG4283|consensus 98.5 3.3E-07 7.1E-12 67.6 6.2 48 7-54 181-229 (397)
22 KOG0650|consensus 98.5 2.9E-07 6.3E-12 72.2 6.2 59 8-67 394-452 (733)
23 KOG1007|consensus 98.5 7.9E-08 1.7E-12 70.5 2.6 45 7-51 207-252 (370)
24 PTZ00421 coronin; Provisional 98.5 5E-07 1.1E-11 68.5 6.8 43 12-54 166-208 (493)
25 KOG2041|consensus 98.5 2.8E-07 6E-12 74.0 5.5 47 1-47 1-47 (1189)
26 KOG1310|consensus 98.5 1.8E-07 3.9E-12 73.1 4.2 57 11-67 47-104 (758)
27 KOG0291|consensus 98.4 5.1E-07 1.1E-11 72.1 6.2 45 2-46 461-510 (893)
28 KOG2096|consensus 98.4 3.1E-07 6.8E-12 68.1 4.5 36 10-45 82-117 (420)
29 KOG2394|consensus 98.4 3.8E-07 8.2E-12 70.8 5.1 53 14-66 332-384 (636)
30 KOG0272|consensus 98.4 2.9E-07 6.4E-12 69.5 4.2 55 12-66 301-355 (459)
31 KOG0266|consensus 98.4 9.2E-07 2E-11 65.7 6.8 57 11-67 200-257 (456)
32 KOG0318|consensus 98.4 6.6E-07 1.4E-11 69.2 6.1 41 11-51 232-272 (603)
33 PTZ00420 coronin; Provisional 98.4 1E-06 2.2E-11 68.2 6.8 36 11-46 71-107 (568)
34 KOG0279|consensus 98.3 9E-07 1.9E-11 64.3 5.3 50 8-57 186-235 (315)
35 KOG0645|consensus 98.3 2.4E-06 5.1E-11 62.1 7.2 54 10-63 101-156 (312)
36 KOG0315|consensus 98.3 8.6E-07 1.9E-11 64.0 4.4 34 12-45 81-114 (311)
37 PLN00181 protein SPA1-RELATED; 98.3 2.4E-06 5.3E-11 66.7 6.9 42 11-52 572-614 (793)
38 KOG0302|consensus 98.2 2.3E-06 4.9E-11 64.3 5.6 56 11-66 299-357 (440)
39 PTZ00420 coronin; Provisional 98.2 4E-06 8.6E-11 65.0 6.9 42 11-52 122-164 (568)
40 KOG0292|consensus 98.2 2.6E-06 5.7E-11 69.4 6.0 55 12-66 91-145 (1202)
41 KOG0286|consensus 98.2 3.7E-06 8E-11 61.6 6.1 45 11-55 183-228 (343)
42 KOG0275|consensus 98.2 8.7E-07 1.9E-11 66.3 2.9 44 6-49 205-248 (508)
43 KOG0293|consensus 98.2 5.2E-07 1.1E-11 68.5 1.8 34 12-45 480-514 (519)
44 KOG0296|consensus 98.2 4.2E-06 9.1E-11 62.5 6.4 52 2-53 89-145 (399)
45 KOG0308|consensus 98.2 3.3E-06 7.2E-11 66.6 6.0 53 6-58 204-257 (735)
46 KOG0279|consensus 98.2 3E-06 6.6E-11 61.6 5.3 56 11-66 60-115 (315)
47 KOG0269|consensus 98.2 1.5E-06 3.3E-11 69.3 4.1 58 9-66 128-186 (839)
48 KOG0319|consensus 98.2 1.3E-06 2.8E-11 69.4 3.6 58 9-67 458-516 (775)
49 KOG1539|consensus 98.2 2.4E-06 5.2E-11 68.7 5.1 37 12-48 574-610 (910)
50 KOG0276|consensus 98.2 3.9E-06 8.5E-11 66.3 6.2 60 3-63 129-190 (794)
51 KOG0315|consensus 98.2 3.5E-06 7.6E-11 60.9 5.4 55 7-61 251-305 (311)
52 KOG0319|consensus 98.2 2.6E-06 5.6E-11 67.7 5.0 45 10-54 501-545 (775)
53 KOG0283|consensus 98.2 2E-06 4.3E-11 68.2 4.3 37 12-48 407-444 (712)
54 KOG0292|consensus 98.2 1.7E-06 3.7E-11 70.4 3.5 44 12-55 49-92 (1202)
55 KOG0273|consensus 98.1 2.5E-06 5.4E-11 65.3 4.1 44 12-55 357-400 (524)
56 KOG0273|consensus 98.1 2.8E-06 6E-11 65.1 4.2 39 12-50 450-488 (524)
57 cd00200 WD40 WD40 domain, foun 98.1 1.8E-05 3.9E-10 50.1 7.3 44 10-53 47-90 (289)
58 KOG0275|consensus 98.1 4.3E-07 9.4E-12 67.9 -0.3 41 13-53 262-302 (508)
59 KOG1273|consensus 98.1 5.2E-06 1.1E-10 61.7 5.3 46 8-53 59-104 (405)
60 KOG0772|consensus 98.1 2.1E-06 4.5E-11 66.6 3.3 48 6-53 354-403 (641)
61 KOG0643|consensus 98.1 8.2E-06 1.8E-10 59.4 5.6 41 12-52 50-90 (327)
62 KOG0310|consensus 98.1 4.8E-06 1E-10 63.6 4.6 48 12-60 151-199 (487)
63 KOG0641|consensus 98.1 7.2E-06 1.6E-10 59.2 5.2 39 10-48 85-123 (350)
64 PLN00181 protein SPA1-RELATED; 98.1 7.1E-06 1.5E-10 64.1 5.5 34 12-45 481-514 (793)
65 KOG0286|consensus 98.1 1.7E-05 3.7E-10 58.2 6.9 46 4-49 45-90 (343)
66 KOG0282|consensus 98.1 4.1E-06 9E-11 64.1 3.8 44 12-55 256-299 (503)
67 KOG2110|consensus 98.1 2E-05 4.3E-10 58.9 7.1 44 12-55 171-215 (391)
68 KOG0973|consensus 98.0 1.1E-05 2.3E-10 65.6 6.0 53 4-57 119-171 (942)
69 KOG0643|consensus 98.0 4E-06 8.7E-11 61.0 2.9 36 11-46 284-319 (327)
70 KOG0284|consensus 98.0 1.8E-06 3.9E-11 65.3 1.0 61 6-66 130-190 (464)
71 KOG1407|consensus 98.0 4.9E-06 1.1E-10 60.3 3.1 34 12-45 187-220 (313)
72 KOG0265|consensus 98.0 1.7E-05 3.7E-10 58.2 5.7 41 11-51 87-127 (338)
73 KOG0647|consensus 98.0 1.9E-05 4.2E-10 58.0 5.9 37 11-47 69-105 (347)
74 KOG0277|consensus 98.0 1.8E-05 4E-10 57.3 5.7 46 11-56 144-190 (311)
75 KOG0289|consensus 98.0 1.1E-05 2.3E-10 61.6 4.6 36 12-47 387-422 (506)
76 KOG1034|consensus 98.0 9.5E-06 2.1E-10 60.3 4.3 54 12-65 133-190 (385)
77 KOG1009|consensus 98.0 1.1E-05 2.4E-10 60.8 4.5 53 3-55 112-164 (434)
78 KOG0313|consensus 98.0 1.3E-05 2.7E-10 60.3 4.6 53 10-62 341-395 (423)
79 KOG0306|consensus 98.0 9.7E-06 2.1E-10 65.0 4.2 55 12-66 548-602 (888)
80 PF12894 Apc4_WD40: Anaphase-p 98.0 4.8E-05 1E-09 41.5 5.8 33 13-45 10-42 (47)
81 KOG0296|consensus 97.9 1.7E-05 3.6E-10 59.3 5.0 53 12-64 62-114 (399)
82 KOG0646|consensus 97.9 1.4E-05 3E-10 61.0 4.4 38 10-47 271-310 (476)
83 KOG1272|consensus 97.9 1.6E-05 3.5E-10 61.1 4.7 43 12-54 291-333 (545)
84 KOG0772|consensus 97.9 1.6E-05 3.4E-10 61.9 4.5 49 9-57 263-312 (641)
85 KOG2111|consensus 97.9 4.9E-05 1.1E-09 56.1 6.6 48 8-55 175-223 (346)
86 KOG0285|consensus 97.9 4.5E-05 9.7E-10 57.5 6.3 48 9-56 272-319 (460)
87 KOG1274|consensus 97.9 2.8E-05 6E-10 63.0 5.5 41 5-45 222-263 (933)
88 KOG0265|consensus 97.9 3.3E-05 7.1E-10 56.8 5.3 39 12-50 45-83 (338)
89 KOG0649|consensus 97.9 4.8E-05 1E-09 55.2 6.0 45 10-54 152-196 (325)
90 KOG0973|consensus 97.8 1.9E-05 4.2E-10 64.2 4.3 33 12-44 67-99 (942)
91 KOG0288|consensus 97.8 2.7E-05 5.8E-10 59.1 4.8 40 15-54 388-427 (459)
92 KOG0277|consensus 97.8 1.7E-05 3.6E-10 57.5 3.5 59 10-68 100-159 (311)
93 PF08662 eIF2A: Eukaryotic tra 97.8 6.4E-05 1.4E-09 50.4 6.0 39 13-51 99-140 (194)
94 KOG2048|consensus 97.8 5.2E-05 1.1E-09 59.9 5.8 41 14-54 154-194 (691)
95 KOG1446|consensus 97.8 4.5E-05 9.9E-10 55.7 5.2 39 12-50 98-136 (311)
96 TIGR03866 PQQ_ABC_repeats PQQ- 97.8 0.00011 2.4E-09 48.6 6.3 42 13-54 247-289 (300)
97 KOG1034|consensus 97.8 3E-05 6.4E-10 57.7 3.9 35 12-46 179-213 (385)
98 KOG2445|consensus 97.8 5.3E-05 1.2E-09 56.0 5.1 44 4-47 3-46 (361)
99 KOG0274|consensus 97.8 8E-05 1.7E-09 57.4 6.2 52 12-63 247-298 (537)
100 KOG0318|consensus 97.8 9.1E-05 2E-09 57.6 6.4 44 11-54 187-230 (603)
101 KOG0305|consensus 97.8 3E-05 6.6E-10 59.4 3.8 44 11-54 298-341 (484)
102 KOG1445|consensus 97.7 3.7E-05 8E-10 61.5 4.3 40 12-51 718-757 (1012)
103 KOG1036|consensus 97.7 1.5E-05 3.3E-10 58.3 2.0 41 15-55 233-273 (323)
104 KOG0645|consensus 97.7 0.00016 3.4E-09 52.7 6.9 50 8-57 144-194 (312)
105 KOG1408|consensus 97.7 3.7E-05 8E-10 62.0 3.8 61 6-66 70-132 (1080)
106 KOG0316|consensus 97.7 0.00011 2.4E-09 53.1 5.8 47 9-55 12-58 (307)
107 KOG0294|consensus 97.7 8.4E-05 1.8E-09 55.0 5.1 54 2-55 110-168 (362)
108 KOG0305|consensus 97.7 7.3E-05 1.6E-09 57.4 4.9 35 12-46 429-463 (484)
109 KOG0303|consensus 97.7 9.5E-05 2.1E-09 56.1 5.3 45 8-52 167-211 (472)
110 KOG0322|consensus 97.7 3.1E-05 6.8E-10 56.4 2.5 33 11-43 290-322 (323)
111 KOG0267|consensus 97.7 6.1E-05 1.3E-09 60.3 4.3 42 8-49 148-189 (825)
112 KOG1274|consensus 97.7 6.6E-05 1.4E-09 60.9 4.5 45 9-53 133-177 (933)
113 KOG2096|consensus 97.6 6E-05 1.3E-09 56.2 3.9 33 12-44 276-308 (420)
114 KOG1332|consensus 97.6 4.1E-05 8.9E-10 55.3 2.8 48 3-50 138-199 (299)
115 KOG4283|consensus 97.6 0.0001 2.2E-09 54.6 4.6 41 7-47 36-77 (397)
116 KOG1188|consensus 97.6 0.00011 2.3E-09 54.8 4.6 37 11-47 162-199 (376)
117 KOG1538|consensus 97.6 8.8E-05 1.9E-09 59.7 4.2 34 11-44 50-83 (1081)
118 KOG0281|consensus 97.6 4.4E-05 9.6E-10 57.6 2.4 40 10-51 233-272 (499)
119 PF08662 eIF2A: Eukaryotic tra 97.6 0.00028 6E-09 47.3 6.0 40 7-46 136-181 (194)
120 KOG0306|consensus 97.6 0.00013 2.9E-09 58.7 4.9 53 12-64 105-157 (888)
121 KOG0307|consensus 97.6 5.4E-05 1.2E-09 62.2 2.8 41 12-52 114-155 (1049)
122 KOG0270|consensus 97.5 2.9E-05 6.2E-10 59.1 1.1 43 12-54 241-284 (463)
123 KOG0276|consensus 97.5 0.00019 4.2E-09 57.0 5.6 56 10-65 93-149 (794)
124 KOG0289|consensus 97.5 9.5E-05 2.1E-09 56.5 3.7 35 16-50 349-383 (506)
125 KOG0640|consensus 97.5 9.3E-05 2E-09 55.2 3.5 33 12-44 110-142 (430)
126 KOG0267|consensus 97.5 3.1E-05 6.7E-10 61.9 0.7 40 11-50 67-106 (825)
127 KOG0274|consensus 97.5 0.00023 5.1E-09 54.9 5.4 42 12-55 329-370 (537)
128 KOG1009|consensus 97.5 0.00013 2.8E-09 55.2 3.8 33 12-44 63-95 (434)
129 KOG1446|consensus 97.5 0.00042 9.1E-09 50.8 6.2 48 8-55 8-55 (311)
130 KOG0281|consensus 97.4 0.00012 2.6E-09 55.3 3.2 53 9-63 315-367 (499)
131 KOG0264|consensus 97.4 0.00013 2.8E-09 55.2 3.3 62 6-67 219-283 (422)
132 KOG0316|consensus 97.4 0.00023 5E-09 51.5 4.4 41 12-52 99-140 (307)
133 KOG1334|consensus 97.4 0.00014 3.1E-09 56.2 3.3 56 12-67 140-196 (559)
134 KOG0268|consensus 97.4 0.00012 2.7E-09 55.0 2.9 40 8-47 266-305 (433)
135 KOG1407|consensus 97.4 0.00027 5.8E-09 51.5 4.5 48 10-57 60-108 (313)
136 KOG0282|consensus 97.4 8.1E-05 1.7E-09 57.1 1.5 51 12-62 212-263 (503)
137 KOG0293|consensus 97.4 0.00027 5.9E-09 54.0 4.2 42 11-52 266-307 (519)
138 KOG0295|consensus 97.3 0.00033 7.1E-09 52.6 4.5 47 11-57 190-236 (406)
139 KOG1524|consensus 97.3 0.00017 3.7E-09 56.7 3.0 35 12-46 184-218 (737)
140 KOG0290|consensus 97.3 0.00027 5.8E-09 52.2 3.7 34 12-45 285-319 (364)
141 KOG0640|consensus 97.3 0.00036 7.8E-09 52.1 4.3 45 4-48 251-295 (430)
142 KOG1332|consensus 97.3 0.00052 1.1E-08 49.7 4.9 37 12-48 54-92 (299)
143 KOG0299|consensus 97.3 0.00033 7.2E-09 53.6 4.1 36 12-47 200-235 (479)
144 KOG4328|consensus 97.2 0.00025 5.5E-09 54.3 3.0 33 13-45 321-354 (498)
145 KOG0294|consensus 97.2 0.00043 9.4E-09 51.3 4.1 55 12-68 41-96 (362)
146 KOG0268|consensus 97.2 0.0001 2.3E-09 55.4 0.9 45 11-55 63-108 (433)
147 KOG4227|consensus 97.2 0.00021 4.5E-09 54.8 2.4 47 11-57 53-104 (609)
148 KOG0647|consensus 97.2 0.00061 1.3E-08 50.3 4.7 43 12-54 111-155 (347)
149 KOG2919|consensus 97.2 0.00039 8.4E-09 52.0 3.6 49 20-68 303-352 (406)
150 KOG1063|consensus 97.2 0.00028 6E-09 56.3 2.7 37 10-46 614-650 (764)
151 KOG0642|consensus 97.2 0.00056 1.2E-08 53.4 4.2 32 12-43 342-373 (577)
152 KOG0974|consensus 97.2 0.00066 1.4E-08 55.6 4.7 41 10-50 171-211 (967)
153 KOG0301|consensus 97.1 0.00082 1.8E-08 53.6 5.0 41 11-51 216-256 (745)
154 KOG0771|consensus 97.1 0.00044 9.6E-09 52.1 3.4 35 12-47 184-218 (398)
155 KOG0310|consensus 97.1 0.0013 2.7E-08 50.6 5.7 42 12-53 108-150 (487)
156 KOG0308|consensus 97.1 0.00083 1.8E-08 53.4 4.8 49 12-61 169-217 (735)
157 KOG0278|consensus 97.1 0.0016 3.4E-08 47.6 5.8 43 12-54 141-183 (334)
158 KOG0303|consensus 97.1 0.00032 6.9E-09 53.3 2.2 43 11-53 128-171 (472)
159 KOG2445|consensus 97.1 0.00064 1.4E-08 50.4 3.6 38 6-43 278-317 (361)
160 KOG1524|consensus 97.1 0.00011 2.4E-09 57.7 -0.5 47 12-59 102-148 (737)
161 KOG0313|consensus 97.1 0.0015 3.2E-08 49.4 5.5 43 12-55 258-300 (423)
162 KOG0300|consensus 97.0 0.0012 2.6E-08 49.7 4.8 43 9-52 352-394 (481)
163 COG2319 FOG: WD40 repeat [Gene 97.0 0.0041 8.8E-08 40.5 6.7 41 9-49 150-191 (466)
164 KOG4640|consensus 97.0 0.0016 3.5E-08 51.6 5.6 39 13-51 60-99 (665)
165 KOG2394|consensus 97.0 0.00063 1.4E-08 53.3 3.2 34 15-48 291-324 (636)
166 COG2319 FOG: WD40 repeat [Gene 97.0 0.0028 6E-08 41.2 5.7 38 12-49 196-234 (466)
167 KOG1445|consensus 97.0 0.00026 5.7E-09 56.7 1.0 51 8-58 671-722 (1012)
168 KOG3914|consensus 97.0 0.00085 1.8E-08 50.4 3.4 37 12-49 192-228 (390)
169 TIGR03866 PQQ_ABC_repeats PQQ- 96.9 0.0048 1.1E-07 40.7 6.6 37 15-51 157-194 (300)
170 KOG0322|consensus 96.9 0.0011 2.3E-08 48.5 3.6 51 16-66 253-303 (323)
171 KOG2055|consensus 96.9 0.0016 3.6E-08 50.1 4.6 31 14-44 482-512 (514)
172 KOG0771|consensus 96.9 0.00076 1.7E-08 50.8 2.8 30 18-47 148-177 (398)
173 KOG2106|consensus 96.9 0.0034 7.3E-08 49.1 6.1 38 14-51 447-484 (626)
174 KOG1523|consensus 96.9 0.0023 4.9E-08 47.6 4.9 64 4-67 45-111 (361)
175 KOG0270|consensus 96.8 0.0034 7.4E-08 48.0 5.7 34 12-45 284-318 (463)
176 KOG0641|consensus 96.8 0.0023 4.9E-08 46.5 4.5 36 11-46 270-305 (350)
177 PF11768 DUF3312: Protein of u 96.8 0.0054 1.2E-07 47.9 6.6 42 7-48 252-293 (545)
178 KOG1273|consensus 96.8 0.0012 2.6E-08 49.3 3.0 32 17-48 26-57 (405)
179 KOG1188|consensus 96.8 0.0018 3.8E-08 48.4 3.7 44 12-55 68-113 (376)
180 KOG1063|consensus 96.8 0.0019 4.2E-08 51.7 4.2 37 11-47 569-605 (764)
181 KOG1240|consensus 96.8 0.0015 3.3E-08 55.0 3.6 33 12-44 1046-1079(1431)
182 KOG0290|consensus 96.7 0.0055 1.2E-07 45.4 6.0 42 8-49 190-232 (364)
183 KOG1036|consensus 96.7 0.0027 5.9E-08 46.7 4.3 34 12-45 92-125 (323)
184 KOG0299|consensus 96.7 0.0055 1.2E-07 47.1 6.0 46 6-52 319-364 (479)
185 KOG2111|consensus 96.7 0.0035 7.5E-08 46.5 4.6 34 14-47 226-259 (346)
186 KOG0646|consensus 96.7 0.0023 5.1E-08 49.1 3.8 32 12-43 121-152 (476)
187 KOG4328|consensus 96.6 0.0039 8.4E-08 48.0 4.7 44 12-55 367-413 (498)
188 KOG0639|consensus 96.5 0.0022 4.9E-08 50.3 3.1 38 12-49 549-586 (705)
189 KOG1963|consensus 96.5 0.0037 8E-08 50.5 4.3 42 13-54 250-291 (792)
190 KOG0288|consensus 96.5 0.0025 5.4E-08 48.6 2.8 51 13-63 218-268 (459)
191 KOG0642|consensus 96.4 0.0041 8.8E-08 48.7 3.9 45 8-53 390-434 (577)
192 KOG0321|consensus 96.4 0.0044 9.6E-08 49.3 4.0 39 12-50 212-254 (720)
193 KOG0321|consensus 96.4 0.0025 5.5E-08 50.7 2.5 39 9-47 139-178 (720)
194 KOG2055|consensus 96.3 0.0079 1.7E-07 46.5 4.7 39 9-47 208-246 (514)
195 KOG1408|consensus 96.3 0.0076 1.6E-07 49.1 4.8 56 11-66 638-693 (1080)
196 KOG0300|consensus 96.3 0.0025 5.5E-08 47.9 1.9 32 11-42 187-218 (481)
197 KOG0644|consensus 96.3 0.003 6.4E-08 51.9 2.4 43 12-54 188-230 (1113)
198 KOG0301|consensus 96.2 0.0075 1.6E-07 48.3 4.4 45 1-46 1-45 (745)
199 KOG0639|consensus 96.1 0.0042 9.2E-08 48.8 2.5 43 15-57 510-552 (705)
200 PRK01742 tolB translocation pr 96.1 0.019 4.1E-07 42.2 5.7 37 12-48 201-240 (429)
201 KOG1064|consensus 96.1 0.0081 1.8E-07 52.6 4.2 38 10-47 2332-2369(2439)
202 PF10313 DUF2415: Uncharacteri 96.0 0.034 7.3E-07 30.0 5.0 31 15-45 1-34 (43)
203 KOG2106|consensus 96.0 0.013 2.7E-07 46.1 4.5 53 11-66 365-417 (626)
204 KOG3881|consensus 95.9 0.013 2.8E-07 44.4 4.0 35 13-47 289-323 (412)
205 KOG1963|consensus 95.8 0.011 2.3E-07 48.0 3.7 36 7-42 198-233 (792)
206 PRK05137 tolB translocation pr 95.8 0.049 1.1E-06 40.0 6.9 37 12-48 199-238 (435)
207 KOG1409|consensus 95.8 0.03 6.6E-07 42.2 5.7 40 11-50 194-233 (404)
208 KOG0307|consensus 95.7 0.0086 1.9E-07 49.7 2.8 44 11-54 250-294 (1049)
209 PF15492 Nbas_N: Neuroblastoma 95.7 0.047 1E-06 39.7 6.1 36 12-47 227-262 (282)
210 KOG1587|consensus 95.5 0.038 8.3E-07 43.2 5.6 35 14-48 242-277 (555)
211 KOG2079|consensus 95.4 0.032 7E-07 46.8 5.2 44 13-56 129-172 (1206)
212 KOG0280|consensus 95.4 0.036 7.7E-07 41.0 4.7 38 13-50 209-247 (339)
213 PRK11028 6-phosphogluconolacto 95.2 0.086 1.9E-06 36.8 6.1 32 14-45 174-206 (330)
214 KOG4532|consensus 95.2 0.065 1.4E-06 39.6 5.5 36 12-47 201-236 (344)
215 PRK02889 tolB translocation pr 95.1 0.085 1.9E-06 38.8 6.1 37 12-48 193-232 (427)
216 KOG2315|consensus 95.1 0.051 1.1E-06 42.7 5.1 46 1-46 338-392 (566)
217 PF15492 Nbas_N: Neuroblastoma 95.1 0.064 1.4E-06 39.0 5.2 32 15-46 44-75 (282)
218 KOG2048|consensus 95.0 0.12 2.7E-06 41.4 7.0 55 1-56 13-67 (691)
219 PF11768 DUF3312: Protein of u 95.0 0.052 1.1E-06 42.5 4.8 38 16-53 301-338 (545)
220 KOG4714|consensus 94.9 0.03 6.4E-07 41.1 3.2 40 12-51 221-261 (319)
221 KOG1310|consensus 94.9 0.048 1E-06 43.4 4.5 39 8-46 87-127 (758)
222 KOG1007|consensus 94.8 0.052 1.1E-06 40.4 4.4 42 3-44 241-289 (370)
223 KOG2321|consensus 94.8 0.038 8.3E-07 44.0 3.8 41 14-54 175-215 (703)
224 PF02239 Cytochrom_D1: Cytochr 94.7 0.22 4.8E-06 36.6 7.4 38 18-55 40-77 (369)
225 KOG2110|consensus 94.7 0.064 1.4E-06 40.5 4.5 32 16-47 220-251 (391)
226 KOG2139|consensus 94.6 0.073 1.6E-06 40.5 4.7 34 14-47 195-229 (445)
227 KOG4378|consensus 94.6 0.046 9.9E-07 43.1 3.7 45 10-54 204-249 (673)
228 KOG4378|consensus 94.5 0.083 1.8E-06 41.7 4.9 52 13-64 249-301 (673)
229 KOG4227|consensus 94.3 0.1 2.2E-06 40.5 4.9 39 10-48 101-139 (609)
230 PRK01742 tolB translocation pr 94.3 0.093 2E-06 38.6 4.6 36 17-52 374-411 (429)
231 TIGR02800 propeller_TolB tol-p 94.2 0.14 3.1E-06 36.5 5.3 36 13-48 188-226 (417)
232 PF11715 Nup160: Nucleoporin N 93.9 0.32 7E-06 36.7 6.9 39 14-52 214-256 (547)
233 KOG1587|consensus 93.8 0.063 1.4E-06 42.0 3.1 35 13-47 440-475 (555)
234 PRK04922 tolB translocation pr 93.5 0.15 3.3E-06 37.4 4.6 36 13-48 202-240 (433)
235 KOG1334|consensus 93.5 0.041 8.9E-07 43.0 1.6 50 1-50 418-472 (559)
236 PRK11028 6-phosphogluconolacto 93.5 0.18 3.9E-06 35.1 4.7 31 16-46 275-306 (330)
237 KOG0280|consensus 93.5 0.16 3.4E-06 37.7 4.5 36 12-47 163-199 (339)
238 KOG2919|consensus 93.4 0.07 1.5E-06 40.2 2.6 40 11-50 247-287 (406)
239 PRK00178 tolB translocation pr 93.0 0.38 8.2E-06 34.9 5.9 37 12-48 196-235 (430)
240 KOG0974|consensus 92.6 0.2 4.3E-06 41.7 4.3 35 11-47 215-249 (967)
241 KOG1539|consensus 92.6 0.36 7.7E-06 39.8 5.6 43 11-53 240-284 (910)
242 KOG4497|consensus 92.5 0.09 2E-06 39.8 2.1 28 15-42 211-238 (447)
243 KOG0644|consensus 92.4 0.03 6.4E-07 46.3 -0.6 54 12-66 230-284 (1113)
244 PRK05137 tolB translocation pr 92.1 0.42 9E-06 35.1 5.2 35 13-47 244-281 (435)
245 KOG4547|consensus 92.1 0.54 1.2E-05 37.0 5.9 43 11-55 141-183 (541)
246 KOG1517|consensus 91.7 0.3 6.5E-06 41.5 4.4 37 9-45 1249-1288(1387)
247 KOG2695|consensus 91.6 0.22 4.7E-06 37.8 3.2 37 12-48 296-333 (425)
248 KOG3914|consensus 91.4 0.23 4.9E-06 37.6 3.2 35 12-46 149-183 (390)
249 KOG2314|consensus 91.4 0.37 8E-06 38.5 4.4 42 12-54 248-300 (698)
250 PRK03629 tolB translocation pr 91.3 0.86 1.9E-05 33.7 6.1 35 13-47 197-234 (429)
251 PF04841 Vps16_N: Vps16, N-ter 91.2 1.1 2.3E-05 33.4 6.6 37 14-50 216-252 (410)
252 PF07676 PD40: WD40-like Beta 91.2 0.98 2.1E-05 22.3 4.6 28 14-41 8-38 (39)
253 KOG2066|consensus 91.1 0.54 1.2E-05 38.6 5.2 41 12-52 56-109 (846)
254 KOG0650|consensus 91.1 0.33 7.1E-06 39.0 3.9 60 8-67 515-577 (733)
255 KOG3881|consensus 91.1 0.62 1.3E-05 35.5 5.2 56 3-58 186-248 (412)
256 KOG1645|consensus 91.0 0.17 3.7E-06 38.8 2.2 46 10-55 189-235 (463)
257 PRK04922 tolB translocation pr 90.9 0.76 1.7E-05 33.8 5.5 34 16-49 337-373 (433)
258 KOG4714|consensus 90.7 0.09 2E-06 38.6 0.5 39 16-54 181-220 (319)
259 KOG2321|consensus 90.6 0.69 1.5E-05 37.1 5.3 37 15-51 229-265 (703)
260 TIGR02800 propeller_TolB tol-p 90.5 0.88 1.9E-05 32.4 5.4 35 14-48 321-358 (417)
261 PRK01029 tolB translocation pr 90.4 0.8 1.7E-05 34.1 5.3 36 14-49 326-364 (428)
262 PRK04792 tolB translocation pr 90.4 0.73 1.6E-05 34.4 5.0 35 14-48 217-254 (448)
263 COG5170 CDC55 Serine/threonine 90.1 0.47 1E-05 36.0 3.8 57 11-68 169-233 (460)
264 PF10168 Nup88: Nuclear pore c 90.1 1.4 3.1E-05 35.5 6.7 36 12-47 144-182 (717)
265 PRK02889 tolB translocation pr 90.0 0.99 2.2E-05 33.2 5.4 32 17-48 330-364 (427)
266 PF02239 Cytochrom_D1: Cytochr 89.4 1.8 4E-05 31.8 6.5 38 14-51 77-115 (369)
267 PF07569 Hira: TUP1-like enhan 89.4 0.75 1.6E-05 31.6 4.1 30 22-51 18-47 (219)
268 PRK03629 tolB translocation pr 89.2 1.3 2.7E-05 32.8 5.5 30 17-46 376-408 (429)
269 KOG3621|consensus 89.0 0.64 1.4E-05 37.7 4.0 34 12-45 122-155 (726)
270 PRK00178 tolB translocation pr 89.0 1.2 2.5E-05 32.4 5.1 34 15-48 243-279 (430)
271 KOG1354|consensus 88.9 0.72 1.6E-05 35.1 4.0 44 10-54 160-203 (433)
272 KOG1240|consensus 88.9 1.7 3.6E-05 37.6 6.5 43 3-45 1075-1129(1431)
273 KOG4497|consensus 88.9 1.1 2.3E-05 34.2 4.9 36 14-49 91-127 (447)
274 COG5170 CDC55 Serine/threonine 88.8 0.54 1.2E-05 35.7 3.3 38 15-53 281-318 (460)
275 KOG3617|consensus 88.7 0.78 1.7E-05 38.7 4.4 37 8-44 95-131 (1416)
276 KOG1538|consensus 87.5 1.2 2.5E-05 36.8 4.6 41 13-54 131-171 (1081)
277 KOG2066|consensus 87.3 1.4 3E-05 36.3 5.0 38 12-52 158-195 (846)
278 KOG2695|consensus 86.6 0.83 1.8E-05 34.8 3.2 38 23-61 355-392 (425)
279 KOG1409|consensus 86.2 0.76 1.6E-05 34.9 2.8 31 15-45 365-395 (404)
280 PF14783 BBS2_Mid: Ciliary BBS 86.1 1.7 3.6E-05 27.6 4.0 27 17-43 2-32 (111)
281 PLN02919 haloacid dehalogenase 86.1 1.7 3.7E-05 36.3 5.0 33 16-48 860-892 (1057)
282 KOG0649|consensus 86.0 1.9 4.2E-05 31.7 4.7 40 15-54 115-154 (325)
283 KOG1354|consensus 85.9 1.2 2.5E-05 34.0 3.7 32 11-42 22-53 (433)
284 KOG4190|consensus 85.1 0.36 7.9E-06 39.0 0.7 34 12-45 733-766 (1034)
285 KOG1517|consensus 85.1 2.1 4.6E-05 36.7 5.1 40 9-48 1203-1243(1387)
286 TIGR02658 TTQ_MADH_Hv methylam 84.9 6.5 0.00014 29.2 7.2 39 14-52 298-338 (352)
287 PF04762 IKI3: IKI3 family; I 84.6 2.1 4.6E-05 35.3 4.9 29 14-42 120-148 (928)
288 PRK04792 tolB translocation pr 84.4 2.8 6.1E-05 31.2 5.1 32 16-47 263-297 (448)
289 KOG0309|consensus 82.3 1.5 3.3E-05 36.4 3.2 44 12-55 112-156 (1081)
290 PF04762 IKI3: IKI3 family; I 81.7 3.5 7.6E-05 34.1 5.1 37 12-49 302-338 (928)
291 PF07433 DUF1513: Protein of u 81.5 4.8 0.00011 29.6 5.3 37 14-50 216-253 (305)
292 KOG1832|consensus 81.4 3 6.6E-05 35.6 4.6 40 12-51 1099-1138(1516)
293 PRK01029 tolB translocation pr 81.4 5 0.00011 29.9 5.4 29 15-43 281-310 (428)
294 KOG2315|consensus 80.8 2.5 5.3E-05 33.6 3.7 40 15-54 312-354 (566)
295 PF10282 Lactonase: Lactonase, 80.6 6.9 0.00015 27.9 5.8 36 14-49 291-329 (345)
296 KOG0309|consensus 80.3 0.59 1.3E-05 38.7 0.2 36 12-47 199-235 (1081)
297 KOG1983|consensus 79.8 2.6 5.7E-05 35.2 3.8 43 20-63 240-282 (993)
298 KOG2041|consensus 79.8 4 8.8E-05 34.1 4.7 36 9-44 110-145 (1189)
299 PF08596 Lgl_C: Lethal giant l 79.6 12 0.00026 28.0 7.0 40 11-51 83-122 (395)
300 KOG2139|consensus 79.3 1.2 2.6E-05 34.1 1.6 54 14-68 98-152 (445)
301 PLN02919 haloacid dehalogenase 78.3 5.9 0.00013 33.1 5.4 33 17-49 806-838 (1057)
302 KOG4547|consensus 78.0 5.6 0.00012 31.5 4.9 39 11-49 99-137 (541)
303 COG5354 Uncharacterized protei 77.6 4.2 9.2E-05 32.2 4.1 38 15-52 72-124 (561)
304 PF14783 BBS2_Mid: Ciliary BBS 77.3 14 0.00031 23.4 5.9 43 12-55 40-89 (111)
305 KOG1275|consensus 76.7 5.1 0.00011 33.9 4.5 35 8-42 306-340 (1118)
306 COG4946 Uncharacterized protei 76.3 13 0.00028 29.8 6.4 41 7-48 395-435 (668)
307 KOG0882|consensus 75.3 2.4 5.1E-05 33.4 2.2 36 14-49 201-236 (558)
308 PF02897 Peptidase_S9_N: Proly 75.1 16 0.00034 26.3 6.3 34 17-50 126-164 (414)
309 TIGR02608 delta_60_rpt delta-6 74.8 12 0.00027 20.7 4.7 19 16-34 2-20 (55)
310 TIGR02658 TTQ_MADH_Hv methylam 74.7 19 0.00042 26.7 6.8 35 19-54 51-95 (352)
311 PF01436 NHL: NHL repeat; Int 74.4 7.7 0.00017 18.2 4.0 24 17-40 4-27 (28)
312 PF12341 DUF3639: Protein of u 73.0 9.3 0.0002 18.5 3.7 25 16-42 3-27 (27)
313 PF12657 TFIIIC_delta: Transcr 72.9 9 0.0002 25.0 4.3 31 15-45 86-122 (173)
314 PF10008 DUF2251: Uncharacteri 71.4 8.3 0.00018 24.1 3.6 30 1-30 41-70 (97)
315 PRK10526 acyl-CoA thioesterase 70.7 4.2 9E-05 28.8 2.4 25 16-40 260-284 (286)
316 PF13360 PQQ_2: PQQ-like domai 70.3 11 0.00023 24.4 4.2 27 23-49 209-235 (238)
317 TIGR02276 beta_rpt_yvtn 40-res 69.7 11 0.00024 18.2 4.9 31 24-54 1-32 (42)
318 KOG4190|consensus 69.6 4.2 9.1E-05 33.2 2.5 34 12-47 782-815 (1034)
319 PF08553 VID27: VID27 cytoplas 68.3 9.9 0.00021 31.4 4.3 27 15-42 578-604 (794)
320 PF10282 Lactonase: Lactonase, 68.1 32 0.0007 24.5 6.6 37 8-44 185-222 (345)
321 PF00930 DPPIV_N: Dipeptidyl p 67.4 12 0.00026 26.8 4.3 42 14-57 42-83 (353)
322 KOG1916|consensus 66.8 5.1 0.00011 34.1 2.5 22 22-43 243-264 (1283)
323 PF01731 Arylesterase: Arylest 66.6 16 0.00035 21.9 4.1 31 15-45 54-85 (86)
324 PRK04043 tolB translocation pr 66.1 30 0.00066 25.8 6.3 34 14-47 232-268 (419)
325 cd03444 Thioesterase_II_repeat 65.5 4.3 9.2E-05 24.6 1.4 23 15-37 81-103 (104)
326 KOG1064|consensus 64.4 17 0.00037 33.3 5.2 40 15-54 2209-2248(2439)
327 smart00564 PQQ beta-propeller 63.8 14 0.0003 17.1 3.7 22 28-49 8-29 (33)
328 PF14655 RAB3GAP2_N: Rab3 GTPa 63.5 29 0.00064 26.4 5.9 34 14-47 307-340 (415)
329 KOG1920|consensus 62.9 10 0.00023 32.7 3.6 34 17-50 292-328 (1265)
330 PRK02888 nitrous-oxide reducta 61.9 9.1 0.0002 30.9 3.0 37 12-48 318-355 (635)
331 PF13570 PQQ_3: PQQ-like domai 60.9 19 0.00042 17.7 3.3 21 25-45 20-40 (40)
332 KOG4460|consensus 60.6 13 0.00029 30.0 3.7 33 16-48 167-202 (741)
333 KOG1272|consensus 59.7 6.3 0.00014 31.1 1.7 41 14-54 209-249 (545)
334 PF02870 Methyltransf_1N: 6-O- 58.9 9.8 0.00021 21.4 2.1 21 23-43 9-29 (77)
335 PF04841 Vps16_N: Vps16, N-ter 58.7 45 0.00098 24.8 6.1 37 9-47 76-112 (410)
336 PF07995 GSDH: Glucose / Sorbo 58.0 43 0.00094 24.0 5.7 31 16-48 3-33 (331)
337 PF14157 YmzC: YmzC-like prote 57.8 19 0.00042 20.8 3.2 28 26-53 29-56 (63)
338 PF08801 Nucleoporin_N: Nup133 56.7 36 0.00077 24.9 5.2 38 15-52 190-227 (422)
339 KOG1275|consensus 55.0 8.5 0.00018 32.7 1.8 34 12-47 215-257 (1118)
340 KOG2377|consensus 54.9 34 0.00074 27.4 5.0 33 13-45 65-97 (657)
341 KOG3616|consensus 54.7 22 0.00048 30.4 4.1 33 15-47 15-47 (1636)
342 TIGR03300 assembly_YfgL outer 54.6 34 0.00074 24.2 4.7 30 25-54 319-348 (377)
343 KOG1008|consensus 54.4 3.7 8E-05 33.5 -0.3 35 12-46 100-139 (783)
344 PF07995 GSDH: Glucose / Sorbo 53.6 43 0.00094 24.0 5.1 28 12-39 303-330 (331)
345 PF13418 Kelch_4: Galactose ox 53.4 19 0.00041 18.2 2.5 27 24-50 11-43 (49)
346 KOG1645|consensus 53.2 30 0.00066 26.9 4.4 33 15-47 236-269 (463)
347 PF06977 SdiA-regulated: SdiA- 52.7 39 0.00084 23.8 4.7 32 15-46 171-203 (248)
348 PF15390 DUF4613: Domain of un 51.7 36 0.00079 27.7 4.8 31 12-42 153-184 (671)
349 COG4946 Uncharacterized protei 51.4 36 0.00078 27.4 4.6 47 1-47 346-393 (668)
350 TIGR00189 tesB acyl-CoA thioes 51.1 20 0.00044 24.5 3.0 23 16-38 248-270 (271)
351 COG2828 Uncharacterized protei 51.1 13 0.00029 28.0 2.2 33 18-50 87-133 (378)
352 COG1946 TesB Acyl-CoA thioeste 50.6 13 0.00029 27.2 2.1 26 16-41 260-285 (289)
353 PF14761 HPS3_N: Hermansky-Pud 50.4 25 0.00054 24.7 3.4 47 8-56 128-178 (215)
354 PF07433 DUF1513: Protein of u 50.3 37 0.0008 25.0 4.4 27 19-45 55-86 (305)
355 PF01344 Kelch_1: Kelch motif; 49.7 28 0.00061 17.2 2.8 25 25-49 11-41 (47)
356 COG3386 Gluconolactonase [Carb 49.6 25 0.00055 25.5 3.4 31 14-44 162-193 (307)
357 PF12768 Rax2: Cortical protei 48.3 39 0.00086 24.3 4.2 38 13-50 35-78 (281)
358 KOG1912|consensus 47.9 31 0.00067 29.2 3.9 38 13-50 54-103 (1062)
359 PF11090 DUF2833: Protein of u 47.8 20 0.00043 21.9 2.2 29 19-48 2-30 (86)
360 PF13964 Kelch_6: Kelch motif 47.4 32 0.0007 17.5 2.8 25 25-49 11-41 (50)
361 KOG3630|consensus 46.4 34 0.00074 30.0 4.1 33 12-44 196-228 (1405)
362 KOG4532|consensus 46.3 53 0.0011 24.6 4.6 33 17-49 161-193 (344)
363 KOG2395|consensus 46.3 18 0.00039 29.1 2.4 25 18-43 434-458 (644)
364 PF08450 SGL: SMP-30/Gluconola 45.5 61 0.0013 21.5 4.6 29 19-47 4-33 (246)
365 PF06739 SBBP: Beta-propeller 45.3 41 0.0009 16.9 4.3 22 15-36 13-34 (38)
366 PF13360 PQQ_2: PQQ-like domai 44.9 51 0.0011 21.2 4.1 30 25-54 35-64 (238)
367 TIGR03606 non_repeat_PQQ dehyd 44.7 73 0.0016 24.6 5.4 32 15-46 30-61 (454)
368 PF08450 SGL: SMP-30/Gluconola 44.5 92 0.002 20.6 5.8 32 16-48 185-216 (246)
369 PRK13616 lipoprotein LpqB; Pro 44.1 39 0.00084 26.7 3.9 26 14-40 447-472 (591)
370 PRK04043 tolB translocation pr 43.7 1.2E+02 0.0025 22.7 6.2 33 16-48 189-225 (419)
371 PF05907 DUF866: Eukaryotic pr 40.8 56 0.0012 21.6 3.8 29 17-45 105-134 (161)
372 PF06977 SdiA-regulated: SdiA- 40.2 62 0.0013 22.8 4.1 30 15-44 22-52 (248)
373 TIGR02542 B_forsyth_147 Bacter 40.0 27 0.00059 23.0 2.1 35 33-70 52-87 (145)
374 COG4305 Endoglucanase C-termin 39.1 1.4E+02 0.0029 21.0 6.5 65 3-68 149-214 (232)
375 KOG2467|consensus 38.9 27 0.00059 27.1 2.3 22 25-46 340-361 (477)
376 TIGR02171 Fb_sc_TIGR02171 Fibr 37.1 47 0.001 28.1 3.5 41 7-47 342-388 (912)
377 PF10647 Gmad1: Lipoprotein Lp 37.1 81 0.0018 21.8 4.3 28 16-43 113-143 (253)
378 PF04053 Coatomer_WDAD: Coatom 37.1 61 0.0013 24.7 3.9 30 16-46 146-175 (443)
379 PF01011 PQQ: PQQ enzyme repea 36.8 56 0.0012 15.9 3.7 25 29-53 3-27 (38)
380 PF06433 Me-amine-dh_H: Methyl 36.2 86 0.0019 23.5 4.5 40 15-54 289-330 (342)
381 KOG1920|consensus 36.1 64 0.0014 28.2 4.2 28 15-42 110-137 (1265)
382 PF14870 PSII_BNR: Photosynthe 35.0 1E+02 0.0022 22.4 4.7 36 9-44 139-174 (302)
383 PF10214 Rrn6: RNA polymerase 34.1 75 0.0016 25.7 4.2 29 15-43 146-175 (765)
384 PF08954 DUF1900: Domain of un 33.9 1.1E+02 0.0024 19.7 4.3 39 9-47 5-44 (136)
385 COG5354 Uncharacterized protei 33.9 1.3E+02 0.0029 24.1 5.4 35 12-46 272-308 (561)
386 PLN02868 acyl-CoA thioesterase 33.8 55 0.0012 24.2 3.2 22 16-37 391-412 (413)
387 COG3053 CitC Citrate lyase syn 33.7 60 0.0013 24.5 3.3 29 13-41 33-62 (352)
388 PF10584 Proteasome_A_N: Prote 33.7 17 0.00037 17.0 0.3 7 22-28 8-14 (23)
389 PF11164 DUF2948: Protein of u 33.7 1E+02 0.0022 20.3 4.0 35 6-40 73-114 (138)
390 PF08596 Lgl_C: Lethal giant l 32.6 77 0.0017 23.7 3.8 30 16-45 3-32 (395)
391 PF10395 Utp8: Utp8 family; I 32.2 1.3E+02 0.0029 24.6 5.2 31 14-44 129-159 (670)
392 COG2706 3-carboxymuconate cycl 32.1 1.3E+02 0.0029 22.7 4.9 34 13-46 289-323 (346)
393 KOG2114|consensus 32.0 1.1E+02 0.0023 26.1 4.7 38 5-42 115-153 (933)
394 KOG4649|consensus 31.9 67 0.0015 24.1 3.3 21 26-46 333-353 (354)
395 COG2706 3-carboxymuconate cycl 31.1 2.2E+02 0.0048 21.5 5.9 33 14-46 190-223 (346)
396 PF04053 Coatomer_WDAD: Coatom 30.6 63 0.0014 24.7 3.1 26 16-42 34-59 (443)
397 PF14870 PSII_BNR: Photosynthe 30.1 1.1E+02 0.0025 22.2 4.2 22 16-37 234-255 (302)
398 PF00843 Arena_nucleocap: Aren 29.9 20 0.00043 28.3 0.3 17 31-47 147-163 (533)
399 KOG2314|consensus 29.9 64 0.0014 26.3 3.1 32 14-45 492-526 (698)
400 KOG2109|consensus 29.7 71 0.0015 26.5 3.3 39 12-50 313-352 (788)
401 smart00135 LY Low-density lipo 29.1 72 0.0016 14.9 4.7 34 13-46 7-41 (43)
402 PF14655 RAB3GAP2_N: Rab3 GTPa 28.7 1.5E+02 0.0031 22.7 4.7 29 15-43 57-96 (415)
403 PF03088 Str_synth: Strictosid 28.3 1E+02 0.0022 18.5 3.2 17 16-32 58-74 (89)
404 PF07865 DUF1652: Protein of u 28.2 1.3E+02 0.0028 17.4 3.9 33 21-54 11-45 (69)
405 PF14727 PHTB1_N: PTHB1 N-term 27.3 1.6E+02 0.0035 22.4 4.8 22 26-47 37-58 (418)
406 PRK10115 protease 2; Provision 26.2 1.2E+02 0.0025 24.3 4.0 32 16-47 128-164 (686)
407 KOG0882|consensus 26.0 1.1E+02 0.0024 24.4 3.7 34 12-45 142-175 (558)
408 cd00556 Thioesterase_II Thioes 26.0 88 0.0019 17.4 2.6 15 19-33 80-94 (99)
409 PF12566 DUF3748: Protein of u 25.8 68 0.0015 20.8 2.2 22 21-42 74-95 (122)
410 TIGR03075 PQQ_enz_alc_DH PQQ-d 25.5 1.7E+02 0.0037 22.6 4.7 30 25-54 471-500 (527)
411 COG3204 Uncharacterized protei 24.9 2.6E+02 0.0056 20.9 5.3 50 16-65 234-284 (316)
412 KOG4305|consensus 24.7 1.9E+02 0.0042 24.9 5.1 44 16-63 955-998 (1029)
413 KOG4649|consensus 24.4 1.3E+02 0.0028 22.6 3.7 29 23-51 102-130 (354)
414 KOG3620|consensus 24.1 96 0.0021 27.7 3.3 37 8-44 106-146 (1626)
415 PF00519 PPV_E1_C: Papillomavi 23.7 34 0.00074 26.5 0.6 23 48-70 335-357 (432)
416 PF08149 BING4CT: BING4CT (NUC 23.4 1.2E+02 0.0026 18.3 2.8 29 13-41 8-36 (80)
417 PF12234 Rav1p_C: RAVE protein 23.0 1.8E+02 0.0039 23.6 4.5 31 12-42 70-102 (631)
418 COG0823 TolB Periplasmic compo 22.9 2.1E+02 0.0046 21.7 4.7 29 19-47 330-361 (425)
419 smart00612 Kelch Kelch domain. 22.5 1E+02 0.0023 14.4 3.1 13 37-49 16-28 (47)
420 PF14326 DUF4384: Domain of un 22.5 1.6E+02 0.0036 16.7 3.3 27 29-55 12-38 (83)
421 PF14583 Pectate_lyase22: Olig 22.5 1.2E+02 0.0026 23.2 3.3 24 19-42 355-379 (386)
422 KOG2444|consensus 22.4 1.4E+02 0.0031 21.4 3.5 30 25-54 113-142 (238)
423 PF11396 DUF2874: Protein of u 22.2 1E+02 0.0022 16.2 2.2 17 13-29 45-61 (61)
424 cd00216 PQQ_DH Dehydrogenases 22.0 2.1E+02 0.0046 21.6 4.6 29 25-53 405-433 (488)
425 PHA02713 hypothetical protein; 22.0 88 0.0019 24.2 2.5 29 25-53 512-542 (557)
426 PF03178 CPSF_A: CPSF A subuni 21.6 2E+02 0.0044 20.0 4.1 31 14-44 172-202 (321)
427 PF13622 4HBT_3: Thioesterase- 21.1 84 0.0018 21.0 2.1 6 37-42 235-240 (255)
428 KOG3617|consensus 20.9 1.5E+02 0.0032 25.9 3.7 31 12-42 301-331 (1416)
429 PF10411 DsbC_N: Disulfide bon 20.8 1.1E+02 0.0024 16.6 2.1 10 16-25 13-22 (57)
430 TIGR03118 PEPCTERM_chp_1 conse 20.6 2.5E+02 0.0053 21.2 4.5 29 16-44 24-52 (336)
431 PF12275 DUF3616: Protein of u 20.2 1.9E+02 0.0041 21.4 3.9 34 14-47 231-267 (330)
No 1
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=99.36 E-value=3.9e-12 Score=64.61 Aligned_cols=39 Identities=21% Similarity=0.457 Sum_probs=35.7
Q ss_pred EeeeeeecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy11104 4 YLSKKIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLK 42 (70)
Q Consensus 4 ~~~~~I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWd 42 (70)
|...+...+|.+.|++|+|+|++.+|||||.|++|++||
T Consensus 1 g~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 1 GKCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred CeEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 455667789999999999999999999999999999997
No 2
>KOG0272|consensus
Probab=99.05 E-value=2.2e-10 Score=86.08 Aligned_cols=55 Identities=24% Similarity=0.176 Sum_probs=50.1
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEecccccccccCCC
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQERNLQDKLPP 66 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~~~~~~~~~ 66 (70)
+|..+|.+|+|+|||..|||||.|+++||||++..++...+-++.....+++|-|
T Consensus 343 gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p 397 (459)
T KOG0272|consen 343 GHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPAHSNLVSQVKYSP 397 (459)
T ss_pred ccccceeeEeECCCceEEeecCCCCcEEEeeecccccceecccccchhhheEecc
Confidence 7899999999999999999999999999999999999888888877777777776
No 3
>KOG0266|consensus
Probab=98.96 E-value=2.2e-09 Score=79.56 Aligned_cols=56 Identities=16% Similarity=0.213 Sum_probs=47.0
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEecccccccccCCC
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQERNLQDKLPP 66 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~~~~~~~~~ 66 (70)
++|...|+|++|+|+|++++||+.|++|||||+++++..-.+..+........|+|
T Consensus 243 ~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~ 298 (456)
T KOG0266|consen 243 KGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSP 298 (456)
T ss_pred cCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECC
Confidence 38999999999999999999999999999999999776666666665555555554
No 4
>KOG0271|consensus
Probab=98.80 E-value=3.8e-09 Score=79.35 Aligned_cols=58 Identities=21% Similarity=0.219 Sum_probs=46.0
Q ss_pred ecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEeccc-ccccccCCCC
Q psy11104 10 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQE-RNLQDKLPPL 67 (70)
Q Consensus 10 ~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~-~~~~~~~~~~ 67 (70)
-+.|...|.||+|+|||+.||||+.||+|++||.+++.+..+...+|. ..+.-.+-|+
T Consensus 153 ~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep~ 211 (480)
T KOG0271|consen 153 CKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIGRALRGHKKWITALAWEPL 211 (480)
T ss_pred ecCCccEEEEEEECCCcchhhccccCCeEEEecCCCCCcccccccCcccceeEEeeccc
Confidence 357999999999999999999999999999999999887776665543 2444444443
No 5
>KOG1523|consensus
Probab=98.71 E-value=8.9e-09 Score=75.70 Aligned_cols=41 Identities=34% Similarity=0.571 Sum_probs=39.7
Q ss_pred eEEeeeeeecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy11104 2 FIYLSKKIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLK 42 (70)
Q Consensus 2 ~~~~~~~I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWd 42 (70)
.||.+|||++|+.+.|.|++|+|++-+||.||.|+.+|++.
T Consensus 134 dWWVsKhikkPirStv~sldWhpnnVLlaaGs~D~k~rVfS 174 (361)
T KOG1523|consen 134 DWWVSKHIKKPIRSTVTSLDWHPNNVLLAAGSTDGKCRVFS 174 (361)
T ss_pred ceehhhhhCCccccceeeeeccCCcceecccccCcceeEEE
Confidence 59999999999999999999999999999999999999996
No 6
>KOG0271|consensus
Probab=98.67 E-value=2e-08 Score=75.49 Aligned_cols=54 Identities=17% Similarity=0.138 Sum_probs=46.8
Q ss_pred CeEEeeeeeec------CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 1 MFIYLSKKIAI------PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 1 ~~~~~~~~I~~------~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
||+|.-+.-++ +|..-|+.|.||||+.+|||+|-|++||+||-++++...+++.
T Consensus 348 lflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkSVkLW~g~tGk~lasfRG 407 (480)
T KOG0271|consen 348 LFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRYIASASFDKSVKLWDGRTGKFLASFRG 407 (480)
T ss_pred EEEecccccccchhhhhchhhheeeEEECCCccEEEEeecccceeeeeCCCcchhhhhhh
Confidence 68887766663 6899999999999999999999999999999999987766554
No 7
>KOG0263|consensus
Probab=98.67 E-value=2.2e-08 Score=78.93 Aligned_cols=46 Identities=28% Similarity=0.431 Sum_probs=40.5
Q ss_pred eeecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEE
Q psy11104 8 KIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMII 53 (70)
Q Consensus 8 ~I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~ 53 (70)
.|..+|.++|.+++|||+|.+||||++||.|+|||+.+++....+.
T Consensus 571 RiF~GH~~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~ 616 (707)
T KOG0263|consen 571 RIFTGHKGPVTALAFSPCGRYLASGDEDGLIKIWDLANGSLVKQLK 616 (707)
T ss_pred EEecCCCCceEEEEEcCCCceEeecccCCcEEEEEcCCCcchhhhh
Confidence 4667999999999999999999999999999999999987554433
No 8
>KOG0295|consensus
Probab=98.66 E-value=3.8e-08 Score=73.29 Aligned_cols=54 Identities=15% Similarity=0.135 Sum_probs=48.0
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEecccccccccCC
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQERNLQDKLP 65 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~~~~~~~~ 65 (70)
+|...|..++|+|-|+||+|+.+|+++|+||+++.++..+..++++-.++-+|+
T Consensus 332 ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah~hfvt~lDfh 385 (406)
T KOG0295|consen 332 GHDNWVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLEAHEHFVTSLDFH 385 (406)
T ss_pred cccceeeeeEEcCCCeEEEEEecCCcEEEEEeccceeeeccCCCcceeEEEecC
Confidence 688999999999999999999999999999999999999988876655555554
No 9
>KOG0285|consensus
Probab=98.64 E-value=4.8e-08 Score=73.13 Aligned_cols=54 Identities=20% Similarity=0.269 Sum_probs=48.2
Q ss_pred EeeeeeecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEeccc
Q psy11104 4 YLSKKIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQE 57 (70)
Q Consensus 4 ~~~~~I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~ 57 (70)
|+...+-..|.+.|.||++.|-.+++|||+.|++|+|||++++..-+++..+-+
T Consensus 141 wKl~rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~ 194 (460)
T KOG0285|consen 141 WKLYRVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIE 194 (460)
T ss_pred ceehhhhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecchhh
Confidence 555666678999999999999999999999999999999999999988887655
No 10
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=98.63 E-value=8.7e-08 Score=44.28 Aligned_cols=31 Identities=23% Similarity=0.446 Sum_probs=29.1
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLK 42 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWd 42 (70)
.|...|.+++|+|++.++++|+.||.+++|+
T Consensus 10 ~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 10 GHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred ecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 6788999999999999999999999999996
No 11
>KOG0278|consensus
Probab=98.62 E-value=5.4e-08 Score=70.40 Aligned_cols=38 Identities=16% Similarity=0.323 Sum_probs=33.9
Q ss_pred ecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy11104 10 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 10 ~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~ 47 (70)
.+.|-++|.||.|+|+|+..|+||+||+||||....++
T Consensus 263 nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~~~~ 300 (334)
T KOG0278|consen 263 NKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQTTPGK 300 (334)
T ss_pred ccCCCCceEEEEECCCCceeeccCCCceEEEEEecCCC
Confidence 36799999999999999999999999999999865443
No 12
>KOG0263|consensus
Probab=98.61 E-value=4.1e-08 Score=77.40 Aligned_cols=58 Identities=17% Similarity=0.328 Sum_probs=44.7
Q ss_pred eecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEecccccccccCCC
Q psy11104 9 IAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQERNLQDKLPP 66 (70)
Q Consensus 9 I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~~~~~~~~~ 66 (70)
|.-.|.+.|.|++||||+.|+|+||.|.+||+||+.++..+=.+..+.-.....+|-|
T Consensus 530 ifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp 587 (707)
T KOG0263|consen 530 IFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSP 587 (707)
T ss_pred hhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcC
Confidence 4457899999999999999999999999999999999987444433322344444544
No 13
>KOG0291|consensus
Probab=98.60 E-value=7.7e-08 Score=76.67 Aligned_cols=44 Identities=20% Similarity=0.317 Sum_probs=40.0
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEec
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILF 55 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~ 55 (70)
+|...++|++++|||++||+|++||+|||||..++-+-+++..+
T Consensus 348 gH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTFteH 391 (893)
T KOG0291|consen 348 GHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTFTEH 391 (893)
T ss_pred ccccceeeEEECCCCcEEEeccCCCcEEEEeccCceEEEEeccC
Confidence 68889999999999999999999999999999998877776654
No 14
>KOG0269|consensus
Probab=98.58 E-value=6.7e-08 Score=76.87 Aligned_cols=37 Identities=35% Similarity=0.822 Sum_probs=33.9
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~ 47 (70)
.+|+++|.|+.||||+.+|||||.|++|||||..+.+
T Consensus 217 ~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~ 253 (839)
T KOG0269|consen 217 TAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSR 253 (839)
T ss_pred hcccCceEEEeecCCCceeeecCCCccEEEEeccCCC
Confidence 4799999999999999999999999999999977544
No 15
>KOG0284|consensus
Probab=98.57 E-value=2.8e-08 Score=74.89 Aligned_cols=56 Identities=25% Similarity=0.355 Sum_probs=50.9
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEecccccccccCCC
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQERNLQDKLPP 66 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~~~~~~~~~ 66 (70)
.+|+-.|.|++|||.-.+|||||.|..||+||.+++.+.++++.+....+..+|-|
T Consensus 219 ~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~cl~tlh~HKntVl~~~f~~ 274 (464)
T KOG0284|consen 219 RGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCLATLHGHKNTVLAVKFNP 274 (464)
T ss_pred ccCCCCcceeccCCccceeEEccCCceeEeecCCCcchhhhhhhccceEEEEEEcC
Confidence 47899999999999999999999999999999999999999999888777777654
No 16
>KOG0283|consensus
Probab=98.55 E-value=1.1e-07 Score=75.24 Aligned_cols=42 Identities=17% Similarity=0.416 Sum_probs=37.9
Q ss_pred EeeeeeecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy11104 4 YLSKKIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDT 45 (70)
Q Consensus 4 ~~~~~I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~ 45 (70)
+....|..+|.+.|+|+.||+||+||||||+||.||||.+..
T Consensus 257 ~~~Qe~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie 298 (712)
T KOG0283|consen 257 TVVQEISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIE 298 (712)
T ss_pred EEeeccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEec
Confidence 445567779999999999999999999999999999999876
No 17
>PTZ00421 coronin; Provisional
Probab=98.53 E-value=2.8e-07 Score=69.81 Aligned_cols=36 Identities=8% Similarity=0.141 Sum_probs=33.1
Q ss_pred cCCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECCCC
Q psy11104 11 IPNNTKVNCLAWHQ-NQGWIAVGGDDGLLKVLKLDTV 46 (70)
Q Consensus 11 ~~~~~~V~~va~sp-dg~~LasGg~Dg~IklWdi~~~ 46 (70)
.+|.+.|++++|+| ++++|||||+||+|++||+.++
T Consensus 72 ~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~ 108 (493)
T PTZ00421 72 LGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEE 108 (493)
T ss_pred eCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCC
Confidence 46899999999999 7899999999999999999765
No 18
>KOG0264|consensus
Probab=98.52 E-value=1.9e-07 Score=70.31 Aligned_cols=59 Identities=19% Similarity=0.281 Sum_probs=43.6
Q ss_pred eeecCCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCCeEEEEEeccc-ccccccCCC
Q psy11104 8 KIAIPNNTKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTVSLTIMIILFQE-RNLQDKLPP 66 (70)
Q Consensus 8 ~I~~~~~~~V~~va~spd-g~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~-~~~~~~~~~ 66 (70)
+...+|.+.|+|++|||- +..|||||.|++|+|||+++-+..+-..-.++ ..++..+-|
T Consensus 266 ~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSP 326 (422)
T KOG0264|consen 266 HSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSP 326 (422)
T ss_pred ccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCC
Confidence 455689999999999997 67899999999999999988776443333333 344444433
No 19
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=98.52 E-value=4.3e-07 Score=57.56 Aligned_cols=41 Identities=29% Similarity=0.490 Sum_probs=36.3
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEE
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMI 52 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~ 52 (70)
.|.++|.+++|+|++++|++|+.||.|++|++.++......
T Consensus 7 ~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~ 47 (289)
T cd00200 7 GHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTL 47 (289)
T ss_pred ccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEE
Confidence 78999999999999999999999999999999877644433
No 20
>KOG0302|consensus
Probab=98.51 E-value=1.2e-07 Score=71.05 Aligned_cols=51 Identities=14% Similarity=0.244 Sum_probs=40.4
Q ss_pred Eeeeeeec-CCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCC-CeEEEEEe
Q psy11104 4 YLSKKIAI-PNNTKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTV-SLTIMIIL 54 (70)
Q Consensus 4 ~~~~~I~~-~~~~~V~~va~spd-g~~LasGg~Dg~IklWdi~~~-~~~~~~~~ 54 (70)
|+...+.+ .|...|..++|||. ...|||||.||+|||||++++ +.++....
T Consensus 246 W~vd~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~~k 299 (440)
T KOG0302|consen 246 WKVDQRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVSTK 299 (440)
T ss_pred eeecCccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeEee
Confidence 44445555 68999999999998 778999999999999999988 34444443
No 21
>KOG4283|consensus
Probab=98.50 E-value=3.3e-07 Score=67.60 Aligned_cols=48 Identities=17% Similarity=0.396 Sum_probs=39.3
Q ss_pred eeeecCCCCCeEEEEEcCCCCE-EEEEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 7 KKIAIPNNTKVNCLAWHQNQGW-IAVGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 7 ~~I~~~~~~~V~~va~spdg~~-LasGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
.|+--+|++.|.+|+|+|..++ |||||.||.||+||++...-.+....
T Consensus 181 sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD 229 (397)
T KOG4283|consen 181 SHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGCFRVLD 229 (397)
T ss_pred eeeeccccCceEEEEeccCceeEEEecCCCceEEEEEeecccceeEEee
Confidence 3566689999999999999665 89999999999999987754444444
No 22
>KOG0650|consensus
Probab=98.50 E-value=2.9e-07 Score=72.17 Aligned_cols=59 Identities=17% Similarity=0.251 Sum_probs=48.1
Q ss_pred eeecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEecccccccccCCCC
Q psy11104 8 KIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQERNLQDKLPPL 67 (70)
Q Consensus 8 ~I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~~~~~~~~~~ 67 (70)
.+..+|.+.|.||+-+|.|++|||||+||++|||.+.++.+.-++..+ +..-|..+.|+
T Consensus 394 lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~~d-~~I~~vaw~P~ 452 (733)
T KOG0650|consen 394 LVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQFD-SEIRSVAWNPL 452 (733)
T ss_pred eeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEeec-ceeEEEEecCC
Confidence 456789999999999999999999999999999999999876665544 34555555554
No 23
>KOG1007|consensus
Probab=98.49 E-value=7.9e-08 Score=70.51 Aligned_cols=45 Identities=20% Similarity=0.383 Sum_probs=39.2
Q ss_pred eeeecCCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCCeEEE
Q psy11104 7 KKIAIPNNTKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTVSLTIM 51 (70)
Q Consensus 7 ~~I~~~~~~~V~~va~spd-g~~LasGg~Dg~IklWdi~~~~~~~~ 51 (70)
..|+.+|.+.|+.++|||+ .-+|||||+||.|||||.+..+.++.
T Consensus 207 ~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~ 252 (370)
T KOG1007|consen 207 NSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQ 252 (370)
T ss_pred cchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCcccc
Confidence 4577789999999999999 66799999999999999988776554
No 24
>PTZ00421 coronin; Provisional
Probab=98.47 E-value=5e-07 Score=68.49 Aligned_cols=43 Identities=9% Similarity=0.258 Sum_probs=38.2
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
.|...|++++|+|+|.+||+|+.||+|++||+++++....+..
T Consensus 166 ~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~ 208 (493)
T PTZ00421 166 CHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEA 208 (493)
T ss_pred CCCCceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEec
Confidence 5888999999999999999999999999999998886655443
No 25
>KOG2041|consensus
Probab=98.47 E-value=2.8e-07 Score=73.98 Aligned_cols=47 Identities=64% Similarity=1.143 Sum_probs=44.6
Q ss_pred CeEEeeeeeecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy11104 1 MFIYLSKKIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 1 ~~~~~~~~I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~ 47 (70)
||+|++|+|..|++....|++||.+..+||+||.||.+|+-.+.++.
T Consensus 1 Mfvylskki~iPnnvkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t 47 (1189)
T KOG2041|consen 1 MFVYLSKKIGIPNNVKLHCAEWNKESGYIACGGADGLLKVLKLGTDT 47 (1189)
T ss_pred CceEeecccCCCCCceEEEEEEcccCCeEEeccccceeEEEEccccC
Confidence 99999999999999999999999999999999999999999887654
No 26
>KOG1310|consensus
Probab=98.46 E-value=1.8e-07 Score=73.05 Aligned_cols=57 Identities=26% Similarity=0.297 Sum_probs=49.9
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEecccc-cccccCCCC
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQER-NLQDKLPPL 67 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~-~~~~~~~~~ 67 (70)
.+|.+.|+|++|+.||.+|||||+|-.+.|||.-..+..-.+.-+|.+ ..++||-|-
T Consensus 47 ~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~ 104 (758)
T KOG1310|consen 47 TGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPY 104 (758)
T ss_pred ccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeecc
Confidence 379999999999999999999999999999999988888888888777 457777663
No 27
>KOG0291|consensus
Probab=98.44 E-value=5.1e-07 Score=72.08 Aligned_cols=45 Identities=16% Similarity=0.287 Sum_probs=38.7
Q ss_pred eEEeeee-----eecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Q psy11104 2 FIYLSKK-----IAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTV 46 (70)
Q Consensus 2 ~~~~~~~-----I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~ 46 (70)
|||..++ |-.+|.++|.+++|+|+|..|||||.|++||+||+-+.
T Consensus 461 fvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s 510 (893)
T KOG0291|consen 461 FVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSS 510 (893)
T ss_pred EEEEeecCeeeehhcCCCCcceeeEEccccCeEEeccccceEEEEEeecc
Confidence 6776654 44589999999999999999999999999999997544
No 28
>KOG2096|consensus
Probab=98.42 E-value=3.1e-07 Score=68.15 Aligned_cols=36 Identities=11% Similarity=0.140 Sum_probs=33.6
Q ss_pred ecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy11104 10 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDT 45 (70)
Q Consensus 10 ~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~ 45 (70)
-++|++.|.+++|++||+.|||++.|++||||+++.
T Consensus 82 LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~D 117 (420)
T KOG2096|consen 82 LKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRD 117 (420)
T ss_pred hhccCCceeeeEEcCCCceeEEEeCCceEEEEecch
Confidence 357999999999999999999999999999999876
No 29
>KOG2394|consensus
Probab=98.42 E-value=3.8e-07 Score=70.77 Aligned_cols=53 Identities=17% Similarity=0.313 Sum_probs=44.7
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEecccccccccCCC
Q psy11104 14 NTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQERNLQDKLPP 66 (70)
Q Consensus 14 ~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~~~~~~~~~ 66 (70)
-+...||+|||||++|++||+|-.|-||.....+.+++-+.++-=...++|-|
T Consensus 332 FGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~erRVVARGqGHkSWVs~VaFDp 384 (636)
T KOG2394|consen 332 FGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEERRVVARGQGHKSWVSVVAFDP 384 (636)
T ss_pred ccceEEEEEcCCccEEEecCCcceEEEEEeccceEEEeccccccceeeEeecc
Confidence 35789999999999999999999999999999999998766655455555655
No 30
>KOG0272|consensus
Probab=98.42 E-value=2.9e-07 Score=69.49 Aligned_cols=55 Identities=22% Similarity=0.256 Sum_probs=45.7
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEecccccccccCCC
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQERNLQDKLPP 66 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~~~~~~~~~ 66 (70)
+|...|.+++|+|||.+++|||.|.+-||||++++++...+..+-...+...|-|
T Consensus 301 GHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH~k~I~~V~fsP 355 (459)
T KOG0272|consen 301 GHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGRCIMFLAGHIKEILSVAFSP 355 (459)
T ss_pred ccccccceeEecCCCceeeccCccchhheeecccCcEEEEecccccceeeEeECC
Confidence 7899999999999999999999999999999999988776655433455555554
No 31
>KOG0266|consensus
Probab=98.41 E-value=9.2e-07 Score=65.72 Aligned_cols=57 Identities=14% Similarity=0.193 Sum_probs=43.4
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEecccc-cccccCCCC
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQER-NLQDKLPPL 67 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~-~~~~~~~~~ 67 (70)
..|...|++++|+|+|+++++|+.|++|||||+..+........+|+. ..+..|-|.
T Consensus 200 ~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~ 257 (456)
T KOG0266|consen 200 SGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPD 257 (456)
T ss_pred cccccceeeeEECCCCcEEEEecCCceEEEeeccCCCeEEEEecCCCCceEEEEecCC
Confidence 368899999999999999999999999999999665455555555443 444445443
No 32
>KOG0318|consensus
Probab=98.41 E-value=6.6e-07 Score=69.21 Aligned_cols=41 Identities=17% Similarity=0.243 Sum_probs=37.0
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEE
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIM 51 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~ 51 (70)
.+|.+.|.+|+|+||++.++|+|.|.++||||+.+.+..-.
T Consensus 232 ~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t 272 (603)
T KOG0318|consen 232 DAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVST 272 (603)
T ss_pred CCccccEEEEEECCCCceEEEecCCceEEEEEeeccceEEE
Confidence 48999999999999999999999999999999988864443
No 33
>PTZ00420 coronin; Provisional
Probab=98.39 E-value=1e-06 Score=68.22 Aligned_cols=36 Identities=14% Similarity=0.211 Sum_probs=33.0
Q ss_pred cCCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCC
Q psy11104 11 IPNNTKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTV 46 (70)
Q Consensus 11 ~~~~~~V~~va~spd-g~~LasGg~Dg~IklWdi~~~ 46 (70)
.+|.+.|.+++|+|+ +.+|||||.||+|+|||+.++
T Consensus 71 ~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~ 107 (568)
T PTZ00420 71 KGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHN 107 (568)
T ss_pred cCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCC
Confidence 368999999999997 899999999999999999764
No 34
>KOG0279|consensus
Probab=98.35 E-value=9e-07 Score=64.34 Aligned_cols=50 Identities=20% Similarity=0.186 Sum_probs=44.1
Q ss_pred eeecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEeccc
Q psy11104 8 KIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQE 57 (70)
Q Consensus 8 ~I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~ 57 (70)
+...+|++.++.+++||||.++|+||.||.+-+||++.++....+.+++.
T Consensus 186 ~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~lysl~a~~~ 235 (315)
T KOG0279|consen 186 TTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNLYSLEAFDI 235 (315)
T ss_pred hccccccccEEEEEECCCCCEEecCCCCceEEEEEccCCceeEeccCCCe
Confidence 44457899999999999999999999999999999999998777777654
No 35
>KOG0645|consensus
Probab=98.34 E-value=2.4e-06 Score=62.07 Aligned_cols=54 Identities=15% Similarity=0.343 Sum_probs=45.0
Q ss_pred ecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC--eEEEEEeccccccccc
Q psy11104 10 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVS--LTIMIILFQERNLQDK 63 (70)
Q Consensus 10 ~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~--~~~~~~~~~~~~~~~~ 63 (70)
-.+|...|-||+||++|++||+||.|++|-||.+..+. ..+.+...|.+.|+..
T Consensus 101 lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V 156 (312)
T KOG0645|consen 101 LEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHV 156 (312)
T ss_pred eeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEE
Confidence 34788999999999999999999999999999987443 6677777777777654
No 36
>KOG0315|consensus
Probab=98.31 E-value=8.6e-07 Score=64.03 Aligned_cols=34 Identities=21% Similarity=0.565 Sum_probs=32.2
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDT 45 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~ 45 (70)
.|+..|.+|.|..+|+++.|||+||++||||+++
T Consensus 81 ~h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~ 114 (311)
T KOG0315|consen 81 GHTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRS 114 (311)
T ss_pred ccCCceEEEEEeecCeEEEecCCCceEEEEeccC
Confidence 5778999999999999999999999999999987
No 37
>PLN00181 protein SPA1-RELATED; Provisional
Probab=98.29 E-value=2.4e-06 Score=66.67 Aligned_cols=42 Identities=19% Similarity=0.297 Sum_probs=36.0
Q ss_pred cCCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECCCCCeEEEE
Q psy11104 11 IPNNTKVNCLAWHQ-NQGWIAVGGDDGLLKVLKLDTVSLTIMI 52 (70)
Q Consensus 11 ~~~~~~V~~va~sp-dg~~LasGg~Dg~IklWdi~~~~~~~~~ 52 (70)
..|.+.|++++|+| ++.+|+|||.||+|++||++++.....+
T Consensus 572 ~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~ 614 (793)
T PLN00181 572 KEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTI 614 (793)
T ss_pred cCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEE
Confidence 37899999999997 6899999999999999999887654433
No 38
>KOG0302|consensus
Probab=98.24 E-value=2.3e-06 Score=64.34 Aligned_cols=56 Identities=23% Similarity=0.423 Sum_probs=41.3
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC---eEEEEEecccccccccCCC
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVS---LTIMIILFQERNLQDKLPP 66 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~---~~~~~~~~~~~~~~~~~~~ 66 (70)
++|++.||.|+||.+-.+||||++||+++|||++.-+ -+..+..+....++..+-|
T Consensus 299 kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p 357 (440)
T KOG0302|consen 299 KAHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHP 357 (440)
T ss_pred eccCCceeeEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEecc
Confidence 5799999999999997799999999999999986544 3334444444444444433
No 39
>PTZ00420 coronin; Provisional
Probab=98.24 E-value=4e-06 Score=64.95 Aligned_cols=42 Identities=12% Similarity=0.355 Sum_probs=36.1
Q ss_pred cCCCCCeEEEEEcCCCCE-EEEEeCCCcEEEEECCCCCeEEEE
Q psy11104 11 IPNNTKVNCLAWHQNQGW-IAVGGDDGLLKVLKLDTVSLTIMI 52 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~-LasGg~Dg~IklWdi~~~~~~~~~ 52 (70)
.+|...|.+|+|||++.. |||||.||+|+|||++++.....+
T Consensus 122 ~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i 164 (568)
T PTZ00420 122 KGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQI 164 (568)
T ss_pred ecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEE
Confidence 468899999999999765 689999999999999988765544
No 40
>KOG0292|consensus
Probab=98.23 E-value=2.6e-06 Score=69.36 Aligned_cols=55 Identities=13% Similarity=0.254 Sum_probs=52.9
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEecccccccccCCC
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQERNLQDKLPP 66 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~~~~~~~~~ 66 (70)
+|-+.|+.+.||+.-.+|.|+|+|.+||||+.++.++.+.++.+.|-..|++|-|
T Consensus 91 GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhp 145 (1202)
T KOG0292|consen 91 GHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHP 145 (1202)
T ss_pred cccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCC
Confidence 7899999999999999999999999999999999999999999999999999988
No 41
>KOG0286|consensus
Probab=98.22 E-value=3.7e-06 Score=61.64 Aligned_cols=45 Identities=13% Similarity=0.044 Sum_probs=39.4
Q ss_pred cCCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECCCCCeEEEEEec
Q psy11104 11 IPNNTKVNCLAWHQ-NQGWIAVGGDDGLLKVLKLDTVSLTIMIILF 55 (70)
Q Consensus 11 ~~~~~~V~~va~sp-dg~~LasGg~Dg~IklWdi~~~~~~~~~~~~ 55 (70)
.+|.+.|.+++++| +++.++|||.|++.+|||++++...-++..+
T Consensus 183 ~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~gh 228 (343)
T KOG0286|consen 183 HGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEGH 228 (343)
T ss_pred cCCcccEEEEecCCCCCCeEEecccccceeeeeccCcceeEeeccc
Confidence 48999999999999 7999999999999999999999665554443
No 42
>KOG0275|consensus
Probab=98.22 E-value=8.7e-07 Score=66.31 Aligned_cols=44 Identities=20% Similarity=0.470 Sum_probs=40.1
Q ss_pred eeeeecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeE
Q psy11104 6 SKKIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLT 49 (70)
Q Consensus 6 ~~~I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~ 49 (70)
.++|+++..+.+.|..|||||++|+|||-||.|.+||+-+++..
T Consensus 205 ~r~IKFg~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlr 248 (508)
T KOG0275|consen 205 ARSIKFGQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLR 248 (508)
T ss_pred hhheecccccchhheeeCCCCceEeeccccceeeeehhccchhh
Confidence 46899999999999999999999999999999999999887643
No 43
>KOG0293|consensus
Probab=98.22 E-value=5.2e-07 Score=68.52 Aligned_cols=34 Identities=24% Similarity=0.571 Sum_probs=30.9
Q ss_pred CCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCC
Q psy11104 12 PNNTKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDT 45 (70)
Q Consensus 12 ~~~~~V~~va~spd-g~~LasGg~Dg~IklWdi~~ 45 (70)
+|...|+||+|||. ..++||||+||+||||....
T Consensus 480 GHs~~vNcVswNP~~p~m~ASasDDgtIRIWg~~~ 514 (519)
T KOG0293|consen 480 GHSKTVNCVSWNPADPEMFASASDDGTIRIWGPSD 514 (519)
T ss_pred CCcceeeEEecCCCCHHHhhccCCCCeEEEecCCc
Confidence 79999999999997 67899999999999998753
No 44
>KOG0296|consensus
Probab=98.22 E-value=4.2e-06 Score=62.48 Aligned_cols=52 Identities=17% Similarity=0.267 Sum_probs=45.0
Q ss_pred eEEeeeeeec-----CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEE
Q psy11104 2 FIYLSKKIAI-----PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMII 53 (70)
Q Consensus 2 ~~~~~~~I~~-----~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~ 53 (70)
|+|...+=.. .|+..|.|++||.+|.+||||+.+|.|+||+.+++...+.+.
T Consensus 89 flW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~~~~~~~ 145 (399)
T KOG0296|consen 89 FLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGEQWKLD 145 (399)
T ss_pred EEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcccCceEEEee
Confidence 6676655433 699999999999999999999999999999999998887764
No 45
>KOG0308|consensus
Probab=98.21 E-value=3.3e-06 Score=66.61 Aligned_cols=53 Identities=15% Similarity=0.240 Sum_probs=47.1
Q ss_pred eeeeec-CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEecccc
Q psy11104 6 SKKIAI-PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQER 58 (70)
Q Consensus 6 ~~~I~~-~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~ 58 (70)
++.|+. +|...|.++-.++||..+.|||.||+||+||+.-+++..+++.+.|.
T Consensus 204 ~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~ 257 (735)
T KOG0308|consen 204 KKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLATYIVHKEG 257 (735)
T ss_pred cceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeeccccceeeeEEeccCc
Confidence 444554 89999999999999999999999999999999999999998887664
No 46
>KOG0279|consensus
Probab=98.21 E-value=3e-06 Score=61.61 Aligned_cols=56 Identities=14% Similarity=0.097 Sum_probs=46.9
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEecccccccccCCC
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQERNLQDKLPP 66 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~~~~~~~~~ 66 (70)
++|...|..++.++||++..|||.||++|+||+.+++...++..+..-.++.+|-|
T Consensus 60 ~GHsH~v~dv~~s~dg~~alS~swD~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~ 115 (315)
T KOG0279|consen 60 TGHSHFVSDVVLSSDGNFALSASWDGTLRLWDLATGESTRRFVGHTKDVLSVAFST 115 (315)
T ss_pred eccceEecceEEccCCceEEeccccceEEEEEecCCcEEEEEEecCCceEEEEecC
Confidence 36899999999999999999999999999999999977777776655555555543
No 47
>KOG0269|consensus
Probab=98.20 E-value=1.5e-06 Score=69.33 Aligned_cols=58 Identities=19% Similarity=0.227 Sum_probs=48.1
Q ss_pred eecCCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCCeEEEEEecccccccccCCC
Q psy11104 9 IAIPNNTKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTVSLTIMIILFQERNLQDKLPP 66 (70)
Q Consensus 9 I~~~~~~~V~~va~spd-g~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~~~~~~~~~ 66 (70)
..+.|...+++++||+. ..+|+|||.||+||+||++..+...+....-|..-+++|-|
T Consensus 128 ~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~nSESiRDV~fsp 186 (839)
T KOG0269|consen 128 VFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSNSESIRDVKFSP 186 (839)
T ss_pred HhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccccccccccchhhhceeecc
Confidence 45579999999999998 78899999999999999999888777777666555555544
No 48
>KOG0319|consensus
Probab=98.20 E-value=1.3e-06 Score=69.37 Aligned_cols=58 Identities=19% Similarity=0.260 Sum_probs=45.0
Q ss_pred eecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEecccc-cccccCCCC
Q psy11104 9 IAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQER-NLQDKLPPL 67 (70)
Q Consensus 9 I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~-~~~~~~~~~ 67 (70)
....|...||||+.+|+..+|||||.|++.|||++... .......+|.| .-|++|-|-
T Consensus 458 t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~-~l~~vLsGH~RGvw~V~Fs~~ 516 (775)
T KOG0319|consen 458 TERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQL-RLLGVLSGHTRGVWCVSFSKN 516 (775)
T ss_pred HHHhhcccccceEecCCCceEEecccccceeeecccCc-eEEEEeeCCccceEEEEeccc
Confidence 44579999999999999999999999999999999944 44444455555 446666653
No 49
>KOG1539|consensus
Probab=98.20 E-value=2.4e-06 Score=68.68 Aligned_cols=37 Identities=14% Similarity=0.367 Sum_probs=35.1
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCe
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSL 48 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~ 48 (70)
+|+..|++++|||||++|++++.|++||+||+-++.+
T Consensus 574 gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~l 610 (910)
T KOG1539|consen 574 GHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTL 610 (910)
T ss_pred ccccceeeeEeCCCCcEEEEeecCCcEEEEeccCcce
Confidence 6999999999999999999999999999999988864
No 50
>KOG0276|consensus
Probab=98.19 E-value=3.9e-06 Score=66.30 Aligned_cols=60 Identities=13% Similarity=0.043 Sum_probs=50.7
Q ss_pred EEeeeeeecCCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCCeEEEEEeccccc-cccc
Q psy11104 3 IYLSKKIAIPNNTKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTVSLTIMIILFQERN-LQDK 63 (70)
Q Consensus 3 ~~~~~~I~~~~~~~V~~va~spd-g~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~~-~~~~ 63 (70)
-|+..-+..+|...|.+|+|||. .+.+||||-|++||+|.+.+.....++. +||.+ .|..
T Consensus 129 ~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl~-gHekGVN~Vd 190 (794)
T KOG0276|consen 129 EWACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPNFTLE-GHEKGVNCVD 190 (794)
T ss_pred ceeeeeEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCCCCCceeee-ccccCcceEE
Confidence 47777888899999999999996 8899999999999999999998888887 44544 4443
No 51
>KOG0315|consensus
Probab=98.19 E-value=3.5e-06 Score=60.93 Aligned_cols=55 Identities=7% Similarity=0.009 Sum_probs=44.7
Q ss_pred eeeecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEeccccccc
Q psy11104 7 KKIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQERNLQ 61 (70)
Q Consensus 7 ~~I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~~~~ 61 (70)
...-..|...++..+||.||+||+|||.|+++|+|+++.+++.-....++...+|
T Consensus 251 e~~l~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~~~~k~v~qy~gh~K~~vc 305 (311)
T KOG0315|consen 251 ELVLTGHQRWVWDCAFSADGEYLVTASSDHTARLWDLSAGKEVRQYQGHHKAAVC 305 (311)
T ss_pred EEEeecCCceEEeeeeccCccEEEecCCCCceeecccccCceeeecCCcccccEE
Confidence 3334578899999999999999999999999999999999877665555444444
No 52
>KOG0319|consensus
Probab=98.19 E-value=2.6e-06 Score=67.69 Aligned_cols=45 Identities=18% Similarity=0.209 Sum_probs=39.0
Q ss_pred ecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 10 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 10 ~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
-.+|+..|+||.|+|+.+.+||+|.|++||||.+++..+.=++..
T Consensus 501 LsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eG 545 (775)
T KOG0319|consen 501 LSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEG 545 (775)
T ss_pred eeCCccceEEEEeccccceeEeccCCceEEEEEeccceeeeeecC
Confidence 347999999999999999999999999999999998876555443
No 53
>KOG0283|consensus
Probab=98.18 E-value=2e-06 Score=68.22 Aligned_cols=37 Identities=19% Similarity=0.440 Sum_probs=33.7
Q ss_pred CCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCCe
Q psy11104 12 PNNTKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTVSL 48 (70)
Q Consensus 12 ~~~~~V~~va~spd-g~~LasGg~Dg~IklWdi~~~~~ 48 (70)
.|+..|+||+|||. .++++||+-||.||||++...+.
T Consensus 407 ~HndfVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~V 444 (712)
T KOG0283|consen 407 SHNDFVTCVAFNPVDDRYFISGSLDGKVRLWSISDKKV 444 (712)
T ss_pred ecCCeeEEEEecccCCCcEeecccccceEEeecCcCee
Confidence 69999999999996 89999999999999999877653
No 54
>KOG0292|consensus
Probab=98.15 E-value=1.7e-06 Score=70.43 Aligned_cols=44 Identities=23% Similarity=0.307 Sum_probs=40.2
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEec
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILF 55 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~ 55 (70)
.|.++|+.|+|||.+.+++|||+|-+||+|++++.++..++..+
T Consensus 49 eHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rrclftL~GH 92 (1202)
T KOG0292|consen 49 EHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRRCLFTLLGH 92 (1202)
T ss_pred ccCCccceeeecCCCCeEEecCCccEEEEEecccceehhhhccc
Confidence 69999999999999999999999999999999999887776553
No 55
>KOG0273|consensus
Probab=98.15 E-value=2.5e-06 Score=65.32 Aligned_cols=44 Identities=23% Similarity=0.370 Sum_probs=37.8
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEec
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILF 55 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~ 55 (70)
.|.++|+++.|+|.|.+|+|+|+|+++|||+...+...-.+++|
T Consensus 357 GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~H 400 (524)
T KOG0273|consen 357 GHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDLQAH 400 (524)
T ss_pred cccCceEEEEECCCCceEEEecCCCeeEeeecCCCcchhhhhhh
Confidence 59999999999999999999999999999997766655555544
No 56
>KOG0273|consensus
Probab=98.14 E-value=2.8e-06 Score=65.09 Aligned_cols=39 Identities=23% Similarity=0.329 Sum_probs=35.7
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEE
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTI 50 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~ 50 (70)
.|+.+|++|+|+|||+++|+|+.||.|.+|++++++..=
T Consensus 450 kH~~pVysvafS~~g~ylAsGs~dg~V~iws~~~~~l~~ 488 (524)
T KOG0273|consen 450 KHQEPVYSVAFSPNGRYLASGSLDGCVHIWSTKTGKLVK 488 (524)
T ss_pred cCCCceEEEEecCCCcEEEecCCCCeeEeccccchheeE
Confidence 689999999999999999999999999999998876443
No 57
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=98.14 E-value=1.8e-05 Score=50.07 Aligned_cols=44 Identities=16% Similarity=0.191 Sum_probs=36.7
Q ss_pred ecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEE
Q psy11104 10 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMII 53 (70)
Q Consensus 10 ~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~ 53 (70)
...|...+.++.|+|++++|++++.||.|++||+++++....+.
T Consensus 47 ~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~~~~~~~~ 90 (289)
T cd00200 47 LKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGECVRTLT 90 (289)
T ss_pred EecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCcccceEEEe
Confidence 34678889999999999999999999999999998865444443
No 58
>KOG0275|consensus
Probab=98.13 E-value=4.3e-07 Score=67.90 Aligned_cols=41 Identities=22% Similarity=0.398 Sum_probs=35.7
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEE
Q psy11104 13 NNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMII 53 (70)
Q Consensus 13 ~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~ 53 (70)
+...|.|++||.|.++||||+.||.||+|.++++.+.-++.
T Consensus 262 md~aVlci~FSRDsEMlAsGsqDGkIKvWri~tG~ClRrFd 302 (508)
T KOG0275|consen 262 MDDAVLCISFSRDSEMLASGSQDGKIKVWRIETGQCLRRFD 302 (508)
T ss_pred cccceEEEeecccHHHhhccCcCCcEEEEEEecchHHHHhh
Confidence 45789999999999999999999999999999987544443
No 59
>KOG1273|consensus
Probab=98.13 E-value=5.2e-06 Score=61.66 Aligned_cols=46 Identities=15% Similarity=0.166 Sum_probs=39.3
Q ss_pred eeecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEE
Q psy11104 8 KIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMII 53 (70)
Q Consensus 8 ~I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~ 53 (70)
+|--+|-.+|.|++||+||..|.|+|.|..|++||+..+...-++.
T Consensus 59 r~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rir 104 (405)
T KOG1273|consen 59 RMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIR 104 (405)
T ss_pred hhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEE
Confidence 3444799999999999999999999999999999999888544433
No 60
>KOG0772|consensus
Probab=98.13 E-value=2.1e-06 Score=66.64 Aligned_cols=48 Identities=15% Similarity=0.228 Sum_probs=41.7
Q ss_pred eeeeecCCCC--CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEE
Q psy11104 6 SKKIAIPNNT--KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMII 53 (70)
Q Consensus 6 ~~~I~~~~~~--~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~ 53 (70)
.-+|+.+|.. .|.||+||+||++|+|=|.|+++|+||++.-++++-..
T Consensus 354 ~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kkpL~~~ 403 (641)
T KOG0772|consen 354 VMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFKKPLNVR 403 (641)
T ss_pred ceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeeccccccchhhh
Confidence 3467778887 99999999999999999999999999999888776443
No 61
>KOG0643|consensus
Probab=98.09 E-value=8.2e-06 Score=59.43 Aligned_cols=41 Identities=15% Similarity=0.140 Sum_probs=38.1
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEE
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMI 52 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~ 52 (70)
+|.+.|+|++.+-+..+++||+.|.++||||++++++....
T Consensus 50 GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tGk~la~~ 90 (327)
T KOG0643|consen 50 GHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETGKQLATW 90 (327)
T ss_pred CCCceEEEEEecCCcceeeeccccceeEEEEcCCCcEEEEe
Confidence 79999999999999999999999999999999999976653
No 62
>KOG0310|consensus
Probab=98.09 E-value=4.8e-06 Score=63.59 Aligned_cols=48 Identities=13% Similarity=0.205 Sum_probs=38.0
Q ss_pred CCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCCeEEEEEecccccc
Q psy11104 12 PNNTKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTVSLTIMIILFQERNL 60 (70)
Q Consensus 12 ~~~~~V~~va~spd-g~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~~~ 60 (70)
+|.+.|+|.+|+|- +.+++|||.||+||+||+++.... ....+++.-+
T Consensus 151 ~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~-v~elnhg~pV 199 (487)
T KOG0310|consen 151 GHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSR-VVELNHGCPV 199 (487)
T ss_pred CCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCce-eEEecCCCce
Confidence 79999999999997 558999999999999999988633 3344444433
No 63
>KOG0641|consensus
Probab=98.08 E-value=7.2e-06 Score=59.18 Aligned_cols=39 Identities=26% Similarity=0.462 Sum_probs=34.2
Q ss_pred ecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCe
Q psy11104 10 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSL 48 (70)
Q Consensus 10 ~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~ 48 (70)
.+-|++.|+|.+|||+|++||+|+.|++||+-....+.+
T Consensus 85 ~khhkgsiyc~~ws~~geliatgsndk~ik~l~fn~dt~ 123 (350)
T KOG0641|consen 85 NKHHKGSIYCTAWSPCGELIATGSNDKTIKVLPFNADTC 123 (350)
T ss_pred ccccCccEEEEEecCccCeEEecCCCceEEEEecccccc
Confidence 456889999999999999999999999999987765543
No 64
>PLN00181 protein SPA1-RELATED; Provisional
Probab=98.08 E-value=7.1e-06 Score=64.12 Aligned_cols=34 Identities=12% Similarity=0.352 Sum_probs=31.4
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDT 45 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~ 45 (70)
.|.+.|.+++|+|+|++||+||.||+|+|||...
T Consensus 481 ~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~ 514 (793)
T PLN00181 481 NSSNLVCAIGFDRDGEFFATAGVNKKIKIFECES 514 (793)
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCc
Confidence 3788999999999999999999999999999753
No 65
>KOG0286|consensus
Probab=98.06 E-value=1.7e-05 Score=58.18 Aligned_cols=46 Identities=17% Similarity=0.243 Sum_probs=41.0
Q ss_pred EeeeeeecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeE
Q psy11104 4 YLSKKIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLT 49 (70)
Q Consensus 4 ~~~~~I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~ 49 (70)
.+.+.+-++|...|+++.|++|.++|+|+|.||.+.|||.-+..+.
T Consensus 45 ~~~rr~LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~ 90 (343)
T KOG0286|consen 45 MRTRRTLKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKV 90 (343)
T ss_pred eeeEEEecccccceeeeEecCCcCeEEeeccCCeEEEEEcccccce
Confidence 4567888999999999999999999999999999999998766543
No 66
>KOG0282|consensus
Probab=98.06 E-value=4.1e-06 Score=64.06 Aligned_cols=44 Identities=14% Similarity=0.032 Sum_probs=41.7
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEec
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILF 55 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~ 55 (70)
.|+.+|..++||.+|..+.|+|.|++||+||++++++..+++.+
T Consensus 256 gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG~~~~~f~~~ 299 (503)
T KOG0282|consen 256 GHRKPVRDASFNNCGTSFLSASFDRFLKLWDTETGQVLSRFHLD 299 (503)
T ss_pred cchhhhhhhhccccCCeeeeeecceeeeeeccccceEEEEEecC
Confidence 79999999999999999999999999999999999999887775
No 67
>KOG2110|consensus
Probab=98.05 E-value=2e-05 Score=58.92 Aligned_cols=44 Identities=11% Similarity=0.155 Sum_probs=39.6
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCc-EEEEECCCCCeEEEEEec
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGL-LKVLKLDTVSLTIMIILF 55 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~-IklWdi~~~~~~~~~~~~ 55 (70)
.|.+.+-|++|||+|.+|||+|+.|+ ||++.+.+++....++++
T Consensus 171 aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG 215 (391)
T KOG2110|consen 171 AHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRG 215 (391)
T ss_pred ecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCC
Confidence 89999999999999999999999995 799999998877766654
No 68
>KOG0973|consensus
Probab=98.04 E-value=1.1e-05 Score=65.63 Aligned_cols=53 Identities=9% Similarity=0.149 Sum_probs=45.7
Q ss_pred EeeeeeecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEeccc
Q psy11104 4 YLSKKIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQE 57 (70)
Q Consensus 4 ~~~~~I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~ 57 (70)
|++..+..+|.+.|..|+|+|++.+|||+|.|++|.|||-++.+ .+....+|+
T Consensus 119 wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~-~~~vl~~H~ 171 (942)
T KOG0973|consen 119 WKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFE-LLKVLRGHQ 171 (942)
T ss_pred eeEEEEEecCCCccceeccCCCccEEEEecccceEEEEccccce-eeeeeeccc
Confidence 78888888999999999999999999999999999999999994 444444433
No 69
>KOG0643|consensus
Probab=98.02 E-value=4e-06 Score=61.01 Aligned_cols=36 Identities=22% Similarity=0.443 Sum_probs=32.2
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTV 46 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~ 46 (70)
++|-++||+|+|||+|+..+|||+||.||+.-.+..
T Consensus 284 kGHFGPINsvAfhPdGksYsSGGEDG~VR~h~Fd~~ 319 (327)
T KOG0643|consen 284 KGHFGPINSVAFHPDGKSYSSGGEDGYVRLHHFDSN 319 (327)
T ss_pred cccccCcceeEECCCCcccccCCCCceEEEEEeccc
Confidence 478999999999999999999999999999865543
No 70
>KOG0284|consensus
Probab=98.01 E-value=1.8e-06 Score=65.26 Aligned_cols=61 Identities=18% Similarity=0.383 Sum_probs=44.5
Q ss_pred eeeeecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEecccccccccCCC
Q psy11104 6 SKKIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQERNLQDKLPP 66 (70)
Q Consensus 6 ~~~I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~~~~~~~~~ 66 (70)
.+.|.-+|.+.|+++.|+++|.+++||..||.||+|+..-...-+.-..+.|..-+..|-|
T Consensus 130 FEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmnnVk~~~ahh~eaIRdlafSp 190 (464)
T KOG0284|consen 130 FETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMNNVKIIQAHHAEAIRDLAFSP 190 (464)
T ss_pred HHHHhhhhcccceeEEEccCCCEEEEcCCCceEEecccchhhhHHhhHhhhhhhheeccCC
Confidence 3456668999999999999999999999999999999765543332222224444444443
No 71
>KOG1407|consensus
Probab=98.00 E-value=4.9e-06 Score=60.34 Aligned_cols=34 Identities=18% Similarity=0.508 Sum_probs=31.7
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDT 45 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~ 45 (70)
+|.+...||+|+|+|+++|+||.|-.+.|||++.
T Consensus 187 AH~snCicI~f~p~GryfA~GsADAlvSLWD~~E 220 (313)
T KOG1407|consen 187 AHPSNCICIEFDPDGRYFATGSADALVSLWDVDE 220 (313)
T ss_pred cCCcceEEEEECCCCceEeeccccceeeccChhH
Confidence 6888899999999999999999999999999764
No 72
>KOG0265|consensus
Probab=97.99 E-value=1.7e-05 Score=58.20 Aligned_cols=41 Identities=15% Similarity=-0.004 Sum_probs=37.7
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEE
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIM 51 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~ 51 (70)
+.|++.|..+.|++|+..|.|+|.|++++.||.+++++.-.
T Consensus 87 kgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG~~~rk 127 (338)
T KOG0265|consen 87 KGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAETGKRIRK 127 (338)
T ss_pred ccccceeEeeeeccCCCEEEEecCCceEEEEecccceeeeh
Confidence 48999999999999999999999999999999999976543
No 73
>KOG0647|consensus
Probab=97.98 E-value=1.9e-05 Score=58.04 Aligned_cols=37 Identities=19% Similarity=0.274 Sum_probs=34.6
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~ 47 (70)
..|.++|.+++|+-||..+++|+.||.+++||+.++.
T Consensus 69 ~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~Q 105 (347)
T KOG0647|consen 69 QSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASGQ 105 (347)
T ss_pred hccCCCeEEEEEccCCceEEeeccCCceEEEEccCCC
Confidence 4688999999999999999999999999999999883
No 74
>KOG0277|consensus
Probab=97.98 E-value=1.8e-05 Score=57.31 Aligned_cols=46 Identities=15% Similarity=0.180 Sum_probs=41.4
Q ss_pred cCCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCCeEEEEEecc
Q psy11104 11 IPNNTKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTVSLTIMIILFQ 56 (70)
Q Consensus 11 ~~~~~~V~~va~spd-g~~LasGg~Dg~IklWdi~~~~~~~~~~~~~ 56 (70)
++|++.|....|||. ++++|++|.||++|+||++.......+.+++
T Consensus 144 ~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~ 190 (311)
T KOG0277|consen 144 NGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAHN 190 (311)
T ss_pred cCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEecc
Confidence 479999999999998 8999999999999999999887777777776
No 75
>KOG0289|consensus
Probab=97.98 E-value=1.1e-05 Score=61.63 Aligned_cols=36 Identities=25% Similarity=0.533 Sum_probs=33.8
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~ 47 (70)
+|.++|.+|+|+-||.+||++.+|+.|++||++..+
T Consensus 387 ght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~ 422 (506)
T KOG0289|consen 387 GHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLK 422 (506)
T ss_pred CCCCceeEEEeccCceEEEEEecCCeEEEEEehhhc
Confidence 699999999999999999999999999999997665
No 76
>KOG1034|consensus
Probab=97.98 E-value=9.5e-06 Score=60.25 Aligned_cols=54 Identities=9% Similarity=0.157 Sum_probs=44.1
Q ss_pred CCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCCeEEEEEe---cccccccccCC
Q psy11104 12 PNNTKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTVSLTIMIIL---FQERNLQDKLP 65 (70)
Q Consensus 12 ~~~~~V~~va~spd-g~~LasGg~Dg~IklWdi~~~~~~~~~~~---~~~~~~~~~~~ 65 (70)
+|++.|+.|.++|+ .+++.|||.|.+||+|+++++.+.+.+.. +....++.+|-
T Consensus 133 ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~ 190 (385)
T KOG1034|consen 133 GHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFS 190 (385)
T ss_pred ccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCcEEEEEEc
Confidence 79999999999998 78999999999999999999988887654 22235555543
No 77
>KOG1009|consensus
Probab=97.96 E-value=1.1e-05 Score=60.79 Aligned_cols=53 Identities=15% Similarity=0.305 Sum_probs=47.0
Q ss_pred EEeeeeeecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEec
Q psy11104 3 IYLSKKIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILF 55 (70)
Q Consensus 3 ~~~~~~I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~ 55 (70)
.|+.+++-..|...|..++|+||+.++++|+-|.++++||+..+........+
T Consensus 112 ~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~dh 164 (434)
T KOG1009|consen 112 KWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAILDDH 164 (434)
T ss_pred ceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccceeEeecccc
Confidence 38888899999999999999999999999999999999999998766654443
No 78
>KOG0313|consensus
Probab=97.96 E-value=1.3e-05 Score=60.29 Aligned_cols=53 Identities=15% Similarity=0.192 Sum_probs=41.5
Q ss_pred ecCCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCC-eEEEEEecccccccc
Q psy11104 10 AIPNNTKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTVS-LTIMIILFQERNLQD 62 (70)
Q Consensus 10 ~~~~~~~V~~va~spd-g~~LasGg~Dg~IklWdi~~~~-~~~~~~~~~~~~~~~ 62 (70)
..+|+..|.++.|||. ..+|+||+.||++|+||+++.. -...+..+.+..+++
T Consensus 341 ~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~~h~DKvl~v 395 (423)
T KOG0313|consen 341 LIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAGHNDKVLSV 395 (423)
T ss_pred eecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceeeccCCceEEEE
Confidence 3478999999999997 5679999999999999999988 445555554444443
No 79
>KOG0306|consensus
Probab=97.96 E-value=9.7e-06 Score=64.95 Aligned_cols=55 Identities=15% Similarity=0.164 Sum_probs=50.0
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEecccccccccCCC
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQERNLQDKLPP 66 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~~~~~~~~~ 66 (70)
+|.=+|.|++.|||+++|+|||.|+.||+|-++=+.+-=++++++....+.+|-|
T Consensus 548 GHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~fAHdDSvm~V~F~P 602 (888)
T KOG0306|consen 548 GHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFFAHDDSVMSVQFLP 602 (888)
T ss_pred ccccceeEEeccCCcCeEEeccCCCceEEeccccchhhhhhhcccCceeEEEEcc
Confidence 7999999999999999999999999999999988888888888888778888766
No 80
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=97.95 E-value=4.8e-05 Score=41.51 Aligned_cols=33 Identities=30% Similarity=0.657 Sum_probs=29.6
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy11104 13 NNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDT 45 (70)
Q Consensus 13 ~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~ 45 (70)
-...|.+++|+|...+||.|.+||.|.++++..
T Consensus 10 l~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl~~ 42 (47)
T PF12894_consen 10 LPSRVSCMSWCPTMDLIALGTEDGEVLVYRLNW 42 (47)
T ss_pred CCCcEEEEEECCCCCEEEEEECCCeEEEEECCC
Confidence 356799999999999999999999999999843
No 81
>KOG0296|consensus
Probab=97.94 E-value=1.7e-05 Score=59.34 Aligned_cols=53 Identities=17% Similarity=0.206 Sum_probs=47.4
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEecccccccccC
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQERNLQDKL 64 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~~~~~~~ 64 (70)
.|++.|.+|+.+|+.+++||||+|..-.||++.++.+.+.+..+++..++..|
T Consensus 62 ~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~F 114 (399)
T KOG0296|consen 62 KHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSF 114 (399)
T ss_pred hcCCceEEEEeCCCCceEEecCCCceEEEEEccCCcceeEecCCCCceEEEEE
Confidence 79999999999999999999999999999999999988888887776666544
No 82
>KOG0646|consensus
Probab=97.92 E-value=1.4e-05 Score=60.99 Aligned_cols=38 Identities=18% Similarity=0.377 Sum_probs=33.5
Q ss_pred ecCCCC--CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy11104 10 AIPNNT--KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 10 ~~~~~~--~V~~va~spdg~~LasGg~Dg~IklWdi~~~~ 47 (70)
.++|.+ .|.|++.|-||.+|+||++||.|+|||+.+.+
T Consensus 271 ~~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWdi~S~Q 310 (476)
T KOG0646|consen 271 LVGHENESAITCLAISTDGTLLLSGDEDGKVCVWDIYSKQ 310 (476)
T ss_pred eccccCCcceeEEEEecCccEEEeeCCCCCEEEEecchHH
Confidence 345666 99999999999999999999999999987654
No 83
>KOG1272|consensus
Probab=97.92 E-value=1.6e-05 Score=61.08 Aligned_cols=43 Identities=16% Similarity=0.128 Sum_probs=38.8
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
-|.++|.+|+++++|.++||.|.|..++|||++.-.+..+.+.
T Consensus 291 cH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~t 333 (545)
T KOG1272|consen 291 CHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRT 333 (545)
T ss_pred hcCCCcceEEECCCCcEEeecccccceeEeeeccccccceeec
Confidence 3889999999999999999999999999999998887666555
No 84
>KOG0772|consensus
Probab=97.91 E-value=1.6e-05 Score=61.91 Aligned_cols=49 Identities=14% Similarity=0.314 Sum_probs=40.6
Q ss_pred eecCCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCCeEEEEEeccc
Q psy11104 9 IAIPNNTKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTVSLTIMIILFQE 57 (70)
Q Consensus 9 I~~~~~~~V~~va~spd-g~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~ 57 (70)
+.++|...++|.+|||+ -+.+.|+|.||++||||+...+....++....
T Consensus 263 nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~~~k~q~qVik~k~ 312 (641)
T KOG0772|consen 263 NTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVNNTKSQLQVIKTKP 312 (641)
T ss_pred ccCCceeeeeccccccCcccceEEecCCCcEEEEecCCchhheeEEeecc
Confidence 45689999999999998 56799999999999999987776666666533
No 85
>KOG2111|consensus
Probab=97.89 E-value=4.9e-05 Score=56.06 Aligned_cols=48 Identities=15% Similarity=0.290 Sum_probs=43.1
Q ss_pred eeecCCCCCeEEEEEcCCCCEEEEEeCCC-cEEEEECCCCCeEEEEEec
Q psy11104 8 KIAIPNNTKVNCLAWHQNQGWIAVGGDDG-LLKVLKLDTVSLTIMIILF 55 (70)
Q Consensus 8 ~I~~~~~~~V~~va~spdg~~LasGg~Dg-~IklWdi~~~~~~~~~~~~ 55 (70)
.|-++|.+.|.|++.+.+|.++||+|..| .|||||..+++...-++.+
T Consensus 175 ~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG 223 (346)
T KOG2111|consen 175 SIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRG 223 (346)
T ss_pred eEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecC
Confidence 45568999999999999999999999999 6999999999988877765
No 86
>KOG0285|consensus
Probab=97.87 E-value=4.5e-05 Score=57.49 Aligned_cols=48 Identities=10% Similarity=0.178 Sum_probs=43.2
Q ss_pred eecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEecc
Q psy11104 9 IAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQ 56 (70)
Q Consensus 9 I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~ 56 (70)
.-.+|..+|..|.+.|-...++|||.|++||+||++.++.++++..++
T Consensus 272 ~l~GH~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~agkt~~tlt~hk 319 (460)
T KOG0285|consen 272 VLSGHTNPVASVMCQPTDPQVITGSHDSTVRLWDLRAGKTMITLTHHK 319 (460)
T ss_pred EecCCCCcceeEEeecCCCceEEecCCceEEEeeeccCceeEeeeccc
Confidence 344799999999999998899999999999999999999999887764
No 87
>KOG1274|consensus
Probab=97.87 E-value=2.8e-05 Score=63.02 Aligned_cols=41 Identities=32% Similarity=0.411 Sum_probs=33.3
Q ss_pred eeeeeecCCC-CCeEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy11104 5 LSKKIAIPNN-TKVNCLAWHQNQGWIAVGGDDGLLKVLKLDT 45 (70)
Q Consensus 5 ~~~~I~~~~~-~~V~~va~spdg~~LasGg~Dg~IklWdi~~ 45 (70)
.+++....+. +.+.++.|+|+|+|||+++.||.|-|||+++
T Consensus 222 ~~f~Lr~~~~ss~~~~~~wsPnG~YiAAs~~~g~I~vWnv~t 263 (933)
T KOG1274|consen 222 LQFKLRDKLSSSKFSDLQWSPNGKYIAASTLDGQILVWNVDT 263 (933)
T ss_pred eheeecccccccceEEEEEcCCCcEEeeeccCCcEEEEeccc
Confidence 3444444333 4499999999999999999999999999986
No 88
>KOG0265|consensus
Probab=97.86 E-value=3.3e-05 Score=56.76 Aligned_cols=39 Identities=13% Similarity=0.254 Sum_probs=33.9
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEE
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTI 50 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~ 50 (70)
.|.+.|+++.|+|+|..|||||.|..|-+|++..+.+-.
T Consensus 45 gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~ 83 (338)
T KOG0265|consen 45 GHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENF 83 (338)
T ss_pred CCcceEEEEEECCCCCeEeecCCcceEEEEeccccccce
Confidence 588999999999999999999999999999965554333
No 89
>KOG0649|consensus
Probab=97.85 E-value=4.8e-05 Score=55.16 Aligned_cols=45 Identities=22% Similarity=0.230 Sum_probs=36.9
Q ss_pred ecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 10 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 10 ~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
.++|++.|.|+.--.....|.||++||++|+||.++++.+-++.-
T Consensus 152 ~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~ 196 (325)
T KOG0649|consen 152 YRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHVSMIEP 196 (325)
T ss_pred EcCCcceeeeeeecccCcceeecCCCccEEEEeccccceeEEecc
Confidence 458999999999843445678999999999999999997766554
No 90
>KOG0973|consensus
Probab=97.85 E-value=1.9e-05 Score=64.19 Aligned_cols=33 Identities=24% Similarity=0.562 Sum_probs=31.5
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLD 44 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~ 44 (70)
.|.+.|+||-|+|||++||+||+|+.|-||+..
T Consensus 67 ~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~ 99 (942)
T KOG0973|consen 67 DHDGSVNCVRFSPDGSYLASGSDDRLVMIWERA 99 (942)
T ss_pred cccCceeEEEECCCCCeEeeccCcceEEEeeec
Confidence 588999999999999999999999999999977
No 91
>KOG0288|consensus
Probab=97.85 E-value=2.7e-05 Score=59.05 Aligned_cols=40 Identities=18% Similarity=0.312 Sum_probs=35.0
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 15 TKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 15 ~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
+..+.+.|||++.|+|+||.||.|+||++.+++....+-.
T Consensus 388 sDwtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~ 427 (459)
T KOG0288|consen 388 SDWTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLSL 427 (459)
T ss_pred cccceeEECCCCceeeeccCCCcEEEEEccCceEEEEecc
Confidence 4588999999999999999999999999999987665444
No 92
>KOG0277|consensus
Probab=97.85 E-value=1.7e-05 Score=57.54 Aligned_cols=59 Identities=12% Similarity=0.132 Sum_probs=47.5
Q ss_pred ecCCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCCeEEEEEecccccccccCCCCc
Q psy11104 10 AIPNNTKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTVSLTIMIILFQERNLQDKLPPLM 68 (70)
Q Consensus 10 ~~~~~~~V~~va~spd-g~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (70)
.+.|...|.+++|++- .+.+.++|-||+||||+..-.+...++..+.....+++|-|..
T Consensus 100 ~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~ 159 (311)
T KOG0277|consen 100 FKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHI 159 (311)
T ss_pred HHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcceEeecCCccEEEEEecCCCC
Confidence 3479999999999997 7788889999999999987777666655555567777777753
No 93
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=97.83 E-value=6.4e-05 Score=50.39 Aligned_cols=39 Identities=13% Similarity=0.285 Sum_probs=31.4
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCC---CcEEEEECCCCCeEEE
Q psy11104 13 NNTKVNCLAWHQNQGWIAVGGDD---GLLKVLKLDTVSLTIM 51 (70)
Q Consensus 13 ~~~~V~~va~spdg~~LasGg~D---g~IklWdi~~~~~~~~ 51 (70)
+.+.+++|.|||+|++||.||.+ |.|.+||.++.+....
T Consensus 99 ~~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~ 140 (194)
T PF08662_consen 99 GTQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKIST 140 (194)
T ss_pred cCCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeec
Confidence 45678999999999999998754 5699999986655443
No 94
>KOG2048|consensus
Probab=97.80 E-value=5.2e-05 Score=59.93 Aligned_cols=41 Identities=22% Similarity=0.433 Sum_probs=36.5
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 14 NTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 14 ~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
.+.|.+|+|+|++..||+|+.||.||+||..++........
T Consensus 154 ~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~ 194 (691)
T KOG2048|consen 154 KSRVLSLSWNPTGTKIAGGSIDGVIRIWDVKSGQTLHIITM 194 (691)
T ss_pred cceEEEEEecCCccEEEecccCceEEEEEcCCCceEEEeee
Confidence 48999999999999999999999999999999988774333
No 95
>KOG1446|consensus
Probab=97.80 E-value=4.5e-05 Score=55.73 Aligned_cols=39 Identities=13% Similarity=0.096 Sum_probs=35.5
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEE
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTI 50 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~ 50 (70)
+|...|++|+-+|-++.+.|+|.|++||+||++..++.-
T Consensus 98 GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg 136 (311)
T KOG1446|consen 98 GHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQG 136 (311)
T ss_pred CCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCce
Confidence 799999999999999999999999999999999666443
No 96
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=97.77 E-value=0.00011 Score=48.61 Aligned_cols=42 Identities=14% Similarity=0.238 Sum_probs=34.4
Q ss_pred CCCCeEEEEEcCCCCEEEEE-eCCCcEEEEECCCCCeEEEEEe
Q psy11104 13 NNTKVNCLAWHQNQGWIAVG-GDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 13 ~~~~V~~va~spdg~~LasG-g~Dg~IklWdi~~~~~~~~~~~ 54 (70)
+...+.+++|+|+|++|+++ +.+|.|++||+++++..-++..
T Consensus 247 ~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~~~~~~~~ 289 (300)
T TIGR03866 247 VGQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALKVIKSIKV 289 (300)
T ss_pred eCCCcceEEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEEc
Confidence 45678999999999998876 5799999999999886555543
No 97
>KOG1034|consensus
Probab=97.77 E-value=3e-05 Score=57.67 Aligned_cols=35 Identities=23% Similarity=0.271 Sum_probs=32.9
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTV 46 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~ 46 (70)
.|++.|.+|+|+++|.+|||||.|.++++|++...
T Consensus 179 gHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~ 213 (385)
T KOG1034|consen 179 GHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVK 213 (385)
T ss_pred cccCcEEEEEEcCCCCeeeccCCcceEEEEecChh
Confidence 69999999999999999999999999999998843
No 98
>KOG2445|consensus
Probab=97.76 E-value=5.3e-05 Score=55.96 Aligned_cols=44 Identities=11% Similarity=0.108 Sum_probs=37.7
Q ss_pred EeeeeeecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy11104 4 YLSKKIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 4 ~~~~~I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~ 47 (70)
+..+.|--.|.+-|.|+.|++.|+.+|+|+.|++|+|||..++.
T Consensus 3 ~s~~pi~s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s 46 (361)
T KOG2445|consen 3 FSMAPIDSGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDS 46 (361)
T ss_pred ccccccccCCcceeeeeeecccCceeeeccCCCcEEEEeccCCC
Confidence 34566777899999999999999999999999999999964433
No 99
>KOG0274|consensus
Probab=97.76 E-value=8e-05 Score=57.41 Aligned_cols=52 Identities=15% Similarity=-0.042 Sum_probs=45.5
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEeccccccccc
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQERNLQDK 63 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~~~~~~ 63 (70)
+|.+.|+++++..-+.+|++|+.|.++|+||+.++.+...+..+++.+.+-.
T Consensus 247 GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~~~l~gh~stv~~~~ 298 (537)
T KOG0274|consen 247 GHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGECTHSLQGHTSSVRCLT 298 (537)
T ss_pred CCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcEEEEecCCCceEEEEE
Confidence 6999999999977689999999999999999999999999887776655443
No 100
>KOG0318|consensus
Probab=97.75 E-value=9.1e-05 Score=57.65 Aligned_cols=44 Identities=18% Similarity=0.207 Sum_probs=40.3
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
..|...|+||.|||||+++||.|.||+|.++|=+++++...+..
T Consensus 187 r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~ 230 (603)
T KOG0318|consen 187 REHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELED 230 (603)
T ss_pred cccccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecC
Confidence 36888999999999999999999999999999999998887763
No 101
>KOG0305|consensus
Probab=97.75 E-value=3e-05 Score=59.40 Aligned_cols=44 Identities=16% Similarity=0.231 Sum_probs=37.3
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
..|.+.|..++|++|+.++||||.|+.+.|||..+......+..
T Consensus 298 ~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~ 341 (484)
T KOG0305|consen 298 QGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFTFTE 341 (484)
T ss_pred hcccceeeeeEECCCCCeeccCCCccceEeccCCCccccEEEec
Confidence 46999999999999999999999999999999966555554443
No 102
>KOG1445|consensus
Probab=97.75 E-value=3.7e-05 Score=61.45 Aligned_cols=40 Identities=20% Similarity=0.323 Sum_probs=36.8
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEE
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIM 51 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~ 51 (70)
+|.+.|..++|||+|+.+||.+.||+||+++.++..+.+.
T Consensus 718 gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e~pv~ 757 (1012)
T KOG1445|consen 718 GHTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRSREQPVY 757 (1012)
T ss_pred cCcCceeEEEECCCCcceeeeecCceEEEeCCCCCCCccc
Confidence 7999999999999999999999999999999888776654
No 103
>KOG1036|consensus
Probab=97.75 E-value=1.5e-05 Score=58.34 Aligned_cols=41 Identities=27% Similarity=0.444 Sum_probs=34.4
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEec
Q psy11104 15 TKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILF 55 (70)
Q Consensus 15 ~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~ 55 (70)
-+|++|+|||--+.+||||.||.|.+||+.+.+.-+.+..+
T Consensus 233 yPVNai~Fhp~~~tfaTgGsDG~V~~Wd~~~rKrl~q~~~~ 273 (323)
T KOG1036|consen 233 YPVNAIAFHPIHGTFATGGSDGIVNIWDLFNRKRLKQLAKY 273 (323)
T ss_pred EEeceeEeccccceEEecCCCceEEEccCcchhhhhhccCC
Confidence 37999999999999999999999999999887755444443
No 104
>KOG0645|consensus
Probab=97.73 E-value=0.00016 Score=52.74 Aligned_cols=50 Identities=14% Similarity=0.203 Sum_probs=41.9
Q ss_pred eeecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECC-CCCeEEEEEeccc
Q psy11104 8 KIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLD-TVSLTIMIILFQE 57 (70)
Q Consensus 8 ~I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~-~~~~~~~~~~~~~ 57 (70)
.+-.+|.+.|-.+.|||...+|+|+|.|.+||+|+-. .+...+.-..+.+
T Consensus 144 aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~ 194 (312)
T KOG0645|consen 144 AVLQEHTQDVKHVIWHPTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGH 194 (312)
T ss_pred eeeccccccccEEEEcCCcceeEEeccCCeEEEEeecCCCCeeEEEEecCc
Confidence 4566899999999999999999999999999999876 6666666555544
No 105
>KOG1408|consensus
Probab=97.70 E-value=3.7e-05 Score=61.99 Aligned_cols=61 Identities=16% Similarity=0.237 Sum_probs=50.5
Q ss_pred eeeeecCCCCCeEEEEEcCCCCEEEEEe--CCCcEEEEECCCCCeEEEEEecccccccccCCC
Q psy11104 6 SKKIAIPNNTKVNCLAWHQNQGWIAVGG--DDGLLKVLKLDTVSLTIMIILFQERNLQDKLPP 66 (70)
Q Consensus 6 ~~~I~~~~~~~V~~va~spdg~~LasGg--~Dg~IklWdi~~~~~~~~~~~~~~~~~~~~~~~ 66 (70)
+.||.+.++.++.||+|||+|+++|+|- ..-.+|+|+++....+.-+..++-..+|+.|-|
T Consensus 70 Q~hlvnssRk~~t~vAfS~~GryvatGEcG~~pa~kVw~la~h~vVAEfvdHKY~vtcvaFsp 132 (1080)
T KOG1408|consen 70 QSHLVNSSRKPLTCVAFSQNGRYVATGECGRTPASKVWSLAFHGVVAEFVDHKYNVTCVAFSP 132 (1080)
T ss_pred hhheecccCcceeEEEEcCCCcEEEecccCCCccceeeeeccccchhhhhhccccceeeeecC
Confidence 4577888899999999999999999974 666899999999887776666655678888876
No 106
>KOG0316|consensus
Probab=97.70 E-value=0.00011 Score=53.09 Aligned_cols=47 Identities=11% Similarity=0.047 Sum_probs=38.7
Q ss_pred eecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEec
Q psy11104 9 IAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILF 55 (70)
Q Consensus 9 I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~ 55 (70)
|-..+.+.|+++.||-||++..+||.|.+||+|+...+...=+...+
T Consensus 12 ~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~liktYsgh 58 (307)
T KOG0316|consen 12 ILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGH 58 (307)
T ss_pred eecccccceEEEEEccCCCEEEEcCCCceEEeecccccceeeeecCC
Confidence 44567899999999999999999999999999998877654444433
No 107
>KOG0294|consensus
Probab=97.68 E-value=8.4e-05 Score=54.99 Aligned_cols=54 Identities=17% Similarity=0.171 Sum_probs=44.1
Q ss_pred eEEeeeeee-----cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEec
Q psy11104 2 FIYLSKKIA-----IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILF 55 (70)
Q Consensus 2 ~~~~~~~I~-----~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~ 55 (70)
-+|+.+.-+ ++|.+.|+.|+.||.|++-.|-|.|+.+|+||+-.++.+...-..
T Consensus 110 ~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~ 168 (362)
T KOG0294|consen 110 IIWRVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNLK 168 (362)
T ss_pred EEEEcCCeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCccceeeccC
Confidence 356655443 489999999999999999999999999999999888866655444
No 108
>KOG0305|consensus
Probab=97.68 E-value=7.3e-05 Score=57.36 Aligned_cols=35 Identities=23% Similarity=0.234 Sum_probs=32.9
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTV 46 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~ 46 (70)
+|...|..+++||||+.+++|+.|.++|+|++-..
T Consensus 429 gH~~RVl~la~SPdg~~i~t~a~DETlrfw~~f~~ 463 (484)
T KOG0305|consen 429 GHTSRVLYLALSPDGETIVTGAADETLRFWNLFDE 463 (484)
T ss_pred CCcceeEEEEECCCCCEEEEecccCcEEeccccCC
Confidence 79999999999999999999999999999998653
No 109
>KOG0303|consensus
Probab=97.67 E-value=9.5e-05 Score=56.10 Aligned_cols=45 Identities=9% Similarity=0.143 Sum_probs=39.8
Q ss_pred eeecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEE
Q psy11104 8 KIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMI 52 (70)
Q Consensus 8 ~I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~ 52 (70)
.|...|.+.|.+++||-||.+|+|.+.|+.|||||.++++.....
T Consensus 167 li~l~hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~ 211 (472)
T KOG0303|consen 167 LITLDHPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEG 211 (472)
T ss_pred eeecCCCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeec
Confidence 355679999999999999999999999999999999998766543
No 110
>KOG0322|consensus
Probab=97.66 E-value=3.1e-05 Score=56.37 Aligned_cols=33 Identities=21% Similarity=0.309 Sum_probs=31.0
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEC
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKL 43 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi 43 (70)
+-|++.|++++|+|+.+++|.+|.|+.|.+|++
T Consensus 290 kyHsagvn~vAfspd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 290 KYHSAGVNAVAFSPDCELMAAASKDARISLWKL 322 (323)
T ss_pred hhhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence 458899999999999999999999999999986
No 111
>KOG0267|consensus
Probab=97.66 E-value=6.1e-05 Score=60.25 Aligned_cols=42 Identities=24% Similarity=0.455 Sum_probs=36.1
Q ss_pred eeecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeE
Q psy11104 8 KIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLT 49 (70)
Q Consensus 8 ~I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~ 49 (70)
++.+.|..-|+++.|+|+|.++++|++|.+++|||...++..
T Consensus 148 ~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~ 189 (825)
T KOG0267|consen 148 HTYKSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLS 189 (825)
T ss_pred eeecCCcceeEEEeecCCCceeeccCCcceeeeecccccccc
Confidence 455678888999999999999999999999999998665543
No 112
>KOG1274|consensus
Probab=97.65 E-value=6.6e-05 Score=60.92 Aligned_cols=45 Identities=18% Similarity=0.290 Sum_probs=39.3
Q ss_pred eecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEE
Q psy11104 9 IAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMII 53 (70)
Q Consensus 9 I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~ 53 (70)
.-.+|.++|.+|+|+|++++||+.+.||.|++||++++.+..++.
T Consensus 133 ~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~~~tl~ 177 (933)
T KOG1274|consen 133 VLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGILSKTLT 177 (933)
T ss_pred eecccCCceeeeeEcCCCCEEEEEecCceEEEEEcccchhhhhcc
Confidence 345899999999999999999999999999999999887655443
No 113
>KOG2096|consensus
Probab=97.64 E-value=6e-05 Score=56.21 Aligned_cols=33 Identities=15% Similarity=0.208 Sum_probs=31.3
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLD 44 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~ 44 (70)
+|++.|.+.+||++.+.++|.|.||++||||+.
T Consensus 276 GH~saV~~~aFsn~S~r~vtvSkDG~wriwdtd 308 (420)
T KOG2096|consen 276 GHQSAVLAAAFSNSSTRAVTVSKDGKWRIWDTD 308 (420)
T ss_pred cchhheeeeeeCCCcceeEEEecCCcEEEeecc
Confidence 799999999999999999999999999999964
No 114
>KOG1332|consensus
Probab=97.64 E-value=4.1e-05 Score=55.29 Aligned_cols=48 Identities=27% Similarity=0.484 Sum_probs=41.4
Q ss_pred EEeeeeeecCCCCCeEEEEEcCC---C-----------CEEEEEeCCCcEEEEECCCCCeEE
Q psy11104 3 IYLSKKIAIPNNTKVNCLAWHQN---Q-----------GWIAVGGDDGLLKVLKLDTVSLTI 50 (70)
Q Consensus 3 ~~~~~~I~~~~~~~V~~va~spd---g-----------~~LasGg~Dg~IklWdi~~~~~~~ 50 (70)
-|..++|.+.|.-.|++|+|.|- | +.|||||.|.+||||+..+++...
T Consensus 138 ~w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~ 199 (299)
T KOG1332|consen 138 GWTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKL 199 (299)
T ss_pred CccchhhhhccccccceeeecCcCCCccccccCcccccceeeccCCccceeeeecCCcchhh
Confidence 36778999999999999999996 4 569999999999999998875433
No 115
>KOG4283|consensus
Probab=97.61 E-value=0.0001 Score=54.63 Aligned_cols=41 Identities=27% Similarity=0.481 Sum_probs=37.5
Q ss_pred eeeecCCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCC
Q psy11104 7 KKIAIPNNTKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 7 ~~I~~~~~~~V~~va~spd-g~~LasGg~Dg~IklWdi~~~~ 47 (70)
++++.+|++.|+++...+- |+++.|||.||.|.+||++...
T Consensus 36 ~d~~r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t 77 (397)
T KOG4283|consen 36 KDFVRPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNAT 77 (397)
T ss_pred cceeccCCCccceeeeccccceEEeecCCCccEEEEEecccc
Confidence 5788899999999999997 9999999999999999997654
No 116
>KOG1188|consensus
Probab=97.59 E-value=0.00011 Score=54.76 Aligned_cols=37 Identities=22% Similarity=0.381 Sum_probs=33.5
Q ss_pred cCCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCC
Q psy11104 11 IPNNTKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 11 ~~~~~~V~~va~spd-g~~LasGg~Dg~IklWdi~~~~ 47 (70)
..|.+.|++|.|+|+ .++|+|||-||.|.|+|++.+.
T Consensus 162 eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~ 199 (376)
T KOG1188|consen 162 ESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDN 199 (376)
T ss_pred hhccCcceeEEecCCCCCeEEeecccceEEeeecCCCc
Confidence 369999999999997 8899999999999999987654
No 117
>KOG1538|consensus
Probab=97.58 E-value=8.8e-05 Score=59.67 Aligned_cols=34 Identities=18% Similarity=0.302 Sum_probs=31.8
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLD 44 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~ 44 (70)
++|.+.|+||+|+.||+.+|||+.|+.|.+|+-+
T Consensus 50 KgHKDtVycVAys~dGkrFASG~aDK~VI~W~~k 83 (1081)
T KOG1538|consen 50 KGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSK 83 (1081)
T ss_pred ccccceEEEEEEccCCceeccCCCceeEEEeccc
Confidence 5799999999999999999999999999999854
No 118
>KOG0281|consensus
Probab=97.57 E-value=4.4e-05 Score=57.58 Aligned_cols=40 Identities=20% Similarity=0.301 Sum_probs=34.4
Q ss_pred ecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEE
Q psy11104 10 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIM 51 (70)
Q Consensus 10 ~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~ 51 (70)
-.+|.+.|.|+.| +...|+|||.|.+|++||+++++..-+
T Consensus 233 L~GHtGSVLCLqy--d~rviisGSSDsTvrvWDv~tge~l~t 272 (499)
T KOG0281|consen 233 LTGHTGSVLCLQY--DERVIVSGSSDSTVRVWDVNTGEPLNT 272 (499)
T ss_pred hhcCCCcEEeeec--cceEEEecCCCceEEEEeccCCchhhH
Confidence 3489999999999 667999999999999999999874433
No 119
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=97.57 E-value=0.00028 Score=47.30 Aligned_cols=40 Identities=18% Similarity=0.346 Sum_probs=31.6
Q ss_pred eeeecCCCCCeEEEEEcCCCCEEEEEeC------CCcEEEEECCCC
Q psy11104 7 KKIAIPNNTKVNCLAWHQNQGWIAVGGD------DGLLKVLKLDTV 46 (70)
Q Consensus 7 ~~I~~~~~~~V~~va~spdg~~LasGg~------Dg~IklWdi~~~ 46 (70)
+.|...+...+..++|+|||++|++++. |+.++||++...
T Consensus 136 ~~i~~~~~~~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~G~ 181 (194)
T PF08662_consen 136 KKISTFEHSDATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQGR 181 (194)
T ss_pred EEeeccccCcEEEEEEcCCCCEEEEEEeccceeccccEEEEEecCe
Confidence 3445555567899999999999999864 889999998643
No 120
>KOG0306|consensus
Probab=97.56 E-value=0.00013 Score=58.67 Aligned_cols=53 Identities=15% Similarity=0.077 Sum_probs=46.7
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEecccccccccC
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQERNLQDKL 64 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~~~~~~~ 64 (70)
+|...|+++.|...|..|||||.|+.|.+||+-...-.++++.+++..++..|
T Consensus 105 gHK~AVt~l~fd~~G~rlaSGskDt~IIvwDlV~E~Gl~rL~GHkd~iT~~~F 157 (888)
T KOG0306|consen 105 GHKAAVTTLKFDKIGTRLASGSKDTDIIVWDLVGEEGLFRLRGHKDSITQALF 157 (888)
T ss_pred ccccceEEEEEcccCceEeecCCCccEEEEEeccceeeEEeecchHHHhHHhc
Confidence 69999999999999999999999999999999988888888887776555443
No 121
>KOG0307|consensus
Probab=97.56 E-value=5.4e-05 Score=62.18 Aligned_cols=41 Identities=20% Similarity=0.255 Sum_probs=35.6
Q ss_pred CCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCCeEEEE
Q psy11104 12 PNNTKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTVSLTIMI 52 (70)
Q Consensus 12 ~~~~~V~~va~spd-g~~LasGg~Dg~IklWdi~~~~~~~~~ 52 (70)
.|.+.|.+++||+. +++||||++||.|.|||+..-+.+...
T Consensus 114 ~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~ 155 (1049)
T KOG0307|consen 114 KHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTP 155 (1049)
T ss_pred ccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCC
Confidence 48999999999999 669999999999999999876655543
No 122
>KOG0270|consensus
Probab=97.55 E-value=2.9e-05 Score=59.06 Aligned_cols=43 Identities=26% Similarity=0.369 Sum_probs=38.4
Q ss_pred CCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 12 PNNTKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 12 ~~~~~V~~va~spd-g~~LasGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
.|++.|.+++||-+ -..|||||.|.+|++||+.+++....+..
T Consensus 241 gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lWD~~~g~p~~s~~~ 284 (463)
T KOG0270|consen 241 GHTDAVLALSWNRNFRNVLASGSADKTVKLWDVDTGKPKSSITH 284 (463)
T ss_pred cchHHHHHHHhccccceeEEecCCCceEEEEEcCCCCcceehhh
Confidence 58888999999998 67899999999999999999998877663
No 123
>KOG0276|consensus
Probab=97.54 E-value=0.00019 Score=57.01 Aligned_cols=56 Identities=13% Similarity=0.087 Sum_probs=44.8
Q ss_pred ecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEecccc-cccccCC
Q psy11104 10 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQER-NLQDKLP 65 (70)
Q Consensus 10 ~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~-~~~~~~~ 65 (70)
..+|.+.|+||+-||...++.|+|+|-+||+||.+..=......-+|++ ..|..|-
T Consensus 93 FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fn 149 (794)
T KOG0276|consen 93 FEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFN 149 (794)
T ss_pred eeccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEec
Confidence 3489999999999999999999999999999999887666666666665 3344333
No 124
>KOG0289|consensus
Probab=97.53 E-value=9.5e-05 Score=56.55 Aligned_cols=35 Identities=20% Similarity=0.342 Sum_probs=31.8
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEE
Q psy11104 16 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTI 50 (70)
Q Consensus 16 ~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~ 50 (70)
.+.+.+|||||-++++|..||.+||||++++....
T Consensus 349 ~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~~a 383 (506)
T KOG0289|consen 349 EYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVA 383 (506)
T ss_pred eeEEeeEcCCceEEeccCCCceEEEEEcCCccccc
Confidence 48899999999999999999999999999987544
No 125
>KOG0640|consensus
Probab=97.53 E-value=9.3e-05 Score=55.20 Aligned_cols=33 Identities=18% Similarity=0.433 Sum_probs=31.5
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLD 44 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~ 44 (70)
.|++++++-+|||||.++|+||.|.+|||.|+.
T Consensus 110 ~HK~~cR~aafs~DG~lvATGsaD~SIKildve 142 (430)
T KOG0640|consen 110 SHKSPCRAAAFSPDGSLVATGSADASIKILDVE 142 (430)
T ss_pred ecccceeeeeeCCCCcEEEccCCcceEEEeehh
Confidence 589999999999999999999999999999976
No 126
>KOG0267|consensus
Probab=97.49 E-value=3.1e-05 Score=61.87 Aligned_cols=40 Identities=18% Similarity=0.406 Sum_probs=35.9
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEE
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTI 50 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~ 50 (70)
..|.++|.||.|+++..+||.|+.||+||+||+...+..=
T Consensus 67 ~~hespIeSl~f~~~E~LlaagsasgtiK~wDleeAk~vr 106 (825)
T KOG0267|consen 67 TGHESPIESLTFDTSERLLAAGSASGTIKVWDLEEAKIVR 106 (825)
T ss_pred eccCCcceeeecCcchhhhcccccCCceeeeehhhhhhhh
Confidence 4689999999999999999999999999999999776443
No 127
>KOG0274|consensus
Probab=97.49 E-value=0.00023 Score=54.86 Aligned_cols=42 Identities=21% Similarity=0.232 Sum_probs=36.9
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEec
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILF 55 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~ 55 (70)
+|.++|+|+..+ +.++++|+.||+|++||+.+.++.-.+..+
T Consensus 329 ~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH 370 (537)
T KOG0274|consen 329 GHTGPVNCVQLD--EPLLVSGSYDGTVKVWDPRTGKCLKSLSGH 370 (537)
T ss_pred cccccEEEEEec--CCEEEEEecCceEEEEEhhhceeeeeecCC
Confidence 599999999997 899999999999999999988776666654
No 128
>KOG1009|consensus
Probab=97.48 E-value=0.00013 Score=55.18 Aligned_cols=33 Identities=24% Similarity=0.393 Sum_probs=30.8
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLD 44 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~ 44 (70)
.|...|++|-|+|+|++||||+++|.|-+|...
T Consensus 63 ~H~~aVN~vRf~p~gelLASg~D~g~v~lWk~~ 95 (434)
T KOG1009|consen 63 RHTRAVNVVRFSPDGELLASGGDGGEVFLWKQG 95 (434)
T ss_pred CCcceeEEEEEcCCcCeeeecCCCceEEEEEec
Confidence 478899999999999999999999999999865
No 129
>KOG1446|consensus
Probab=97.46 E-value=0.00042 Score=50.76 Aligned_cols=48 Identities=17% Similarity=0.138 Sum_probs=41.0
Q ss_pred eeecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEec
Q psy11104 8 KIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILF 55 (70)
Q Consensus 8 ~I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~ 55 (70)
++..+.++.|++++|+++|++++++++|.+++|+|..++++...+.-+
T Consensus 8 k~f~~~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~sk 55 (311)
T KOG1446|consen 8 KVFRETNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSK 55 (311)
T ss_pred cccccCCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeecc
Confidence 344456889999999999999999999999999999999887766554
No 130
>KOG0281|consensus
Probab=97.44 E-value=0.00012 Score=55.29 Aligned_cols=53 Identities=13% Similarity=0.173 Sum_probs=42.6
Q ss_pred eecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEeccccccccc
Q psy11104 9 IAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQERNLQDK 63 (70)
Q Consensus 9 I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~~~~~~ 63 (70)
+-.+|...|+.|.| +.++|+|+|.|.+||+|++.+++..-.+.+++-...|.|
T Consensus 315 VLvGHrAaVNvVdf--d~kyIVsASgDRTikvW~~st~efvRtl~gHkRGIAClQ 367 (499)
T KOG0281|consen 315 VLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQ 367 (499)
T ss_pred HHhhhhhheeeecc--ccceEEEecCCceEEEEeccceeeehhhhcccccceehh
Confidence 33478899999999 457999999999999999999987777776666665554
No 131
>KOG0264|consensus
Probab=97.44 E-value=0.00013 Score=55.21 Aligned_cols=62 Identities=19% Similarity=0.237 Sum_probs=45.8
Q ss_pred eeeeecCCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCC--CCeEEEEEecccccccccCCCC
Q psy11104 6 SKKIAIPNNTKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDT--VSLTIMIILFQERNLQDKLPPL 67 (70)
Q Consensus 6 ~~~I~~~~~~~V~~va~spd-g~~LasGg~Dg~IklWdi~~--~~~~~~~~~~~~~~~~~~~~~~ 67 (70)
.+.+...|.+.|+.|+|+|- ..+++++|+|+.+.|||+++ .+......++.--..|..|.|.
T Consensus 219 p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~ 283 (422)
T KOG0264|consen 219 PKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPF 283 (422)
T ss_pred ceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCcccccccCCceeEEEeCCC
Confidence 35677789999999999997 78899999999999999995 3333333333223556666664
No 132
>KOG0316|consensus
Probab=97.43 E-value=0.00023 Score=51.46 Aligned_cols=41 Identities=20% Similarity=0.264 Sum_probs=35.9
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC-eEEEE
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVS-LTIMI 52 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~-~~~~~ 52 (70)
.|.+.|++|.||-+...++|||.|.++|+||.++.. +++.+
T Consensus 99 gH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQi 140 (307)
T KOG0316|consen 99 GHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQI 140 (307)
T ss_pred cccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccch
Confidence 799999999999999999999999999999987765 44443
No 133
>KOG1334|consensus
Probab=97.41 E-value=0.00014 Score=56.21 Aligned_cols=56 Identities=21% Similarity=0.165 Sum_probs=48.7
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEecccc-cccccCCCC
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQER-NLQDKLPPL 67 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~-~~~~~~~~~ 67 (70)
+|.+.|+.|.|+..|..|+|||+|..|-+||..++....++.-+|-- .-|+||=|.
T Consensus 140 ~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~ 196 (559)
T KOG1334|consen 140 KHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPF 196 (559)
T ss_pred CCCCccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCC
Confidence 78999999999999999999999999999999999999888876553 456677664
No 134
>KOG0268|consensus
Probab=97.41 E-value=0.00012 Score=55.05 Aligned_cols=40 Identities=8% Similarity=0.113 Sum_probs=35.6
Q ss_pred eeecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy11104 8 KIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 8 ~I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~ 47 (70)
++.+.|.+.|.+|+|||-|+-++|||.|.+|||+....+.
T Consensus 266 ~v~~dhvsAV~dVdfsptG~EfvsgsyDksIRIf~~~~~~ 305 (433)
T KOG0268|consen 266 NVHKDHVSAVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGH 305 (433)
T ss_pred hhhcccceeEEEeccCCCcchhccccccceEEEeecCCCc
Confidence 3455788999999999999999999999999999987665
No 135
>KOG1407|consensus
Probab=97.40 E-value=0.00027 Score=51.45 Aligned_cols=48 Identities=17% Similarity=0.220 Sum_probs=41.8
Q ss_pred ecCCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCCeEEEEEeccc
Q psy11104 10 AIPNNTKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTVSLTIMIILFQE 57 (70)
Q Consensus 10 ~~~~~~~V~~va~spd-g~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~ 57 (70)
...|.+.|..++|+|- ..++|+++.|.+||+||++++++..++....|
T Consensus 60 ~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd~r~~k~~~~i~~~~e 108 (313)
T KOG1407|consen 60 YRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWDIRSGKCTARIETKGE 108 (313)
T ss_pred ccCCCcchhhheeCCCCCcceEEecCCceEEEEEeccCcEEEEeeccCc
Confidence 3478899999999986 78999999999999999999999888776544
No 136
>KOG0282|consensus
Probab=97.36 E-value=8.1e-05 Score=57.14 Aligned_cols=51 Identities=18% Similarity=0.328 Sum_probs=43.3
Q ss_pred CCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECCCCCeEEEEEecccccccc
Q psy11104 12 PNNTKVNCLAWHQ-NQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQERNLQD 62 (70)
Q Consensus 12 ~~~~~V~~va~sp-dg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~~~~~ 62 (70)
+|+..|.++.|.| .+.+|+|||.|+.|+||++-.....++...+|...+.+
T Consensus 212 gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd 263 (503)
T KOG0282|consen 212 GHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRD 263 (503)
T ss_pred CCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhh
Confidence 7999999999999 59999999999999999998877777777666554443
No 137
>KOG0293|consensus
Probab=97.35 E-value=0.00027 Score=54.04 Aligned_cols=42 Identities=19% Similarity=0.414 Sum_probs=37.2
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEE
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMI 52 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~ 52 (70)
.+|..+|..|.||||.++|++||.|..+++||..++.....+
T Consensus 266 vgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~~~~y 307 (519)
T KOG0293|consen 266 VGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDLRHLY 307 (519)
T ss_pred ecccCceEEEEECCCCCeEEecCchHheeeccCCcchhhhhc
Confidence 379999999999999999999999999999999998765443
No 138
>KOG0295|consensus
Probab=97.35 E-value=0.00033 Score=52.61 Aligned_cols=47 Identities=17% Similarity=0.060 Sum_probs=42.2
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEeccc
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQE 57 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~ 57 (70)
.+|...|.+++|-|.|.+|+|++.|.+|+.|++.++-+.-++..+.|
T Consensus 190 ~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~tg~cv~t~~~h~e 236 (406)
T KOG0295|consen 190 IGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECDTGYCVKTFPGHSE 236 (406)
T ss_pred cCcccceeeEEEEecCCeeeecccccceeEEecccceeEEeccCchH
Confidence 46778899999999999999999999999999999998888777655
No 139
>KOG1524|consensus
Probab=97.33 E-value=0.00017 Score=56.71 Aligned_cols=35 Identities=26% Similarity=0.430 Sum_probs=32.1
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTV 46 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~ 46 (70)
+|.+-|.|++|||.+.+|+|||+|-.-|+||-...
T Consensus 184 AHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~G~ 218 (737)
T KOG1524|consen 184 AHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQGA 218 (737)
T ss_pred ccCcEEEEeecCccccceeecCCceeEEeecccCc
Confidence 69999999999999999999999999999995443
No 140
>KOG0290|consensus
Probab=97.32 E-value=0.00027 Score=52.19 Aligned_cols=34 Identities=26% Similarity=0.474 Sum_probs=31.6
Q ss_pred CCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCC
Q psy11104 12 PNNTKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDT 45 (70)
Q Consensus 12 ~~~~~V~~va~spd-g~~LasGg~Dg~IklWdi~~ 45 (70)
+|++.|++|+|.|. ...|+|||+|..+-|||+..
T Consensus 285 ~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q 319 (364)
T KOG0290|consen 285 NHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQ 319 (364)
T ss_pred cCcccccceEecCCCCceeeecCCcceEEEEeccc
Confidence 59999999999998 78999999999999999864
No 141
>KOG0640|consensus
Probab=97.30 E-value=0.00036 Score=52.13 Aligned_cols=45 Identities=9% Similarity=0.130 Sum_probs=36.7
Q ss_pred EeeeeeecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCe
Q psy11104 4 YLSKKIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSL 48 (70)
Q Consensus 4 ~~~~~I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~ 48 (70)
|.+.+=.-.|.+.|++|.+|+.|++.++||.||.|||||=-++++
T Consensus 251 fvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rC 295 (430)
T KOG0640|consen 251 FVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRC 295 (430)
T ss_pred eeecCcccccccceeEEEecCCccEEEEeccCCcEEeeccccHHH
Confidence 344444456899999999999999999999999999999555443
No 142
>KOG1332|consensus
Probab=97.30 E-value=0.00052 Score=49.70 Aligned_cols=37 Identities=19% Similarity=0.153 Sum_probs=33.1
Q ss_pred CCCCCeEEEEEc-C-CCCEEEEEeCCCcEEEEECCCCCe
Q psy11104 12 PNNTKVNCLAWH-Q-NQGWIAVGGDDGLLKVLKLDTVSL 48 (70)
Q Consensus 12 ~~~~~V~~va~s-p-dg~~LasGg~Dg~IklWdi~~~~~ 48 (70)
+|.++|..++|- | .|.+|||++.||.|.||...+++.
T Consensus 54 Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~w 92 (299)
T KOG1332|consen 54 GHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGRW 92 (299)
T ss_pred CCCCCeeEEeecccccCcEeeEeecCceEEEEecCCCch
Confidence 699999999995 4 499999999999999999888763
No 143
>KOG0299|consensus
Probab=97.29 E-value=0.00033 Score=53.58 Aligned_cols=36 Identities=22% Similarity=0.373 Sum_probs=33.5
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~ 47 (70)
.|...+.+++.||||++||+|+.|..|.||+.++.+
T Consensus 200 ~h~keil~~avS~Dgkylatgg~d~~v~Iw~~~t~e 235 (479)
T KOG0299|consen 200 GHVKEILTLAVSSDGKYLATGGRDRHVQIWDCDTLE 235 (479)
T ss_pred cccceeEEEEEcCCCcEEEecCCCceEEEecCcccc
Confidence 678899999999999999999999999999988765
No 144
>KOG4328|consensus
Probab=97.25 E-value=0.00025 Score=54.34 Aligned_cols=33 Identities=18% Similarity=0.242 Sum_probs=29.6
Q ss_pred CCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCC
Q psy11104 13 NNTKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDT 45 (70)
Q Consensus 13 ~~~~V~~va~spd-g~~LasGg~Dg~IklWdi~~ 45 (70)
|...|++|++||. -.+|||||.|++.||||++.
T Consensus 321 h~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~ 354 (498)
T KOG4328|consen 321 HKKKITSVALNPVCPWFLATASLDQTAKIWDLRQ 354 (498)
T ss_pred hhcccceeecCCCCchheeecccCcceeeeehhh
Confidence 6679999999998 67799999999999999864
No 145
>KOG0294|consensus
Probab=97.24 E-value=0.00043 Score=51.30 Aligned_cols=55 Identities=16% Similarity=0.261 Sum_probs=41.8
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEeccccccccc-CCCCc
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQERNLQDK-LPPLM 68 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~~~~~~-~~~~~ 68 (70)
+|.+.+.|||- +|.++||||.|-+|+|+|.+...+.-.+.-+.-..+.-+ .||++
T Consensus 41 aH~~sitavAV--s~~~~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S 96 (362)
T KOG0294|consen 41 AHAGSITALAV--SGPYVASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLS 96 (362)
T ss_pred ccccceeEEEe--cceeEeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcc
Confidence 58899999998 689999999999999999988776655555544444434 35553
No 146
>KOG0268|consensus
Probab=97.24 E-value=0.0001 Score=55.42 Aligned_cols=45 Identities=27% Similarity=0.312 Sum_probs=38.0
Q ss_pred cCCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEECCCCCeEEEEEec
Q psy11104 11 IPNNTKVNCLAWHQNQ-GWIAVGGDDGLLKVLKLDTVSLTIMIILF 55 (70)
Q Consensus 11 ~~~~~~V~~va~spdg-~~LasGg~Dg~IklWdi~~~~~~~~~~~~ 55 (70)
-+|...|.|++=||+. ..+|||+.||.|+|||+....+.-++.++
T Consensus 63 ~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH 108 (433)
T KOG0268|consen 63 DGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFKAH 108 (433)
T ss_pred cccccccchhhcCcchhhhhhccccCceEEEEehhhhhhhheeecc
Confidence 3689999999999995 88999999999999999887665555553
No 147
>KOG4227|consensus
Probab=97.23 E-value=0.00021 Score=54.80 Aligned_cols=47 Identities=23% Similarity=0.352 Sum_probs=37.5
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC-----CCeEEEEEeccc
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDT-----VSLTIMIILFQE 57 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~-----~~~~~~~~~~~~ 57 (70)
..|.+.|++|.|+.++++|||||+|..+++|++.. -.++|.+-.++|
T Consensus 53 ~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H 104 (609)
T KOG4227|consen 53 REHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPH 104 (609)
T ss_pred hhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCcc
Confidence 36899999999999999999999999999998642 224555555555
No 148
>KOG0647|consensus
Probab=97.23 E-value=0.00061 Score=50.30 Aligned_cols=43 Identities=16% Similarity=0.242 Sum_probs=36.8
Q ss_pred CCCCCeEEEEEcCCCC--EEEEEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 12 PNNTKVNCLAWHQNQG--WIAVGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 12 ~~~~~V~~va~spdg~--~LasGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
.|.++|.++.|=+... .|+|||-|++||.||.+......++.+
T Consensus 111 ~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~L 155 (347)
T KOG0647|consen 111 AHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQL 155 (347)
T ss_pred ecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeec
Confidence 5899999999977644 799999999999999998887776554
No 149
>KOG2919|consensus
Probab=97.21 E-value=0.00039 Score=51.95 Aligned_cols=49 Identities=18% Similarity=0.232 Sum_probs=33.4
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEECCC-CCeEEEEEecccccccccCCCCc
Q psy11104 20 LAWHQNQGWIAVGGDDGLLKVLKLDT-VSLTIMIILFQERNLQDKLPPLM 68 (70)
Q Consensus 20 va~spdg~~LasGg~Dg~IklWdi~~-~~~~~~~~~~~~~~~~~~~~~~~ 68 (70)
.+..|.|++||+|+.||.|++||++. +.++...........-..+-|.|
T Consensus 303 FDld~~~~~LasG~tdG~V~vwdlk~~gn~~sv~~~~sd~vNgvslnP~m 352 (406)
T KOG2919|consen 303 FDLDPKGEILASGDTDGSVRVWDLKDLGNEVSVTGNYSDTVNGVSLNPIM 352 (406)
T ss_pred EecCCCCceeeccCCCccEEEEecCCCCCcccccccccccccceecCccc
Confidence 46678899999999999999999988 55454444333333333444443
No 150
>KOG1063|consensus
Probab=97.18 E-value=0.00028 Score=56.28 Aligned_cols=37 Identities=14% Similarity=0.233 Sum_probs=34.1
Q ss_pred ecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Q psy11104 10 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTV 46 (70)
Q Consensus 10 ~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~ 46 (70)
.++|+.-|++.+|+|++.++||+|.|++|++|.....
T Consensus 614 ~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~~~~ 650 (764)
T KOG1063|consen 614 LKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEEPDL 650 (764)
T ss_pred ccccceEEEEcccCcccceeEEecCCceEEEEeccCc
Confidence 4679999999999999999999999999999998766
No 151
>KOG0642|consensus
Probab=97.16 E-value=0.00056 Score=53.37 Aligned_cols=32 Identities=25% Similarity=0.386 Sum_probs=30.4
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEC
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKL 43 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi 43 (70)
+|.++|.|++..++++++.|||.||+|+.|++
T Consensus 342 aH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w~~ 373 (577)
T KOG0642|consen 342 AHEGPVLCVVVPSNGEHCYSGGIDGTIRCWNL 373 (577)
T ss_pred cccCceEEEEecCCceEEEeeccCceeeeecc
Confidence 69999999999999999999999999999954
No 152
>KOG0974|consensus
Probab=97.16 E-value=0.00066 Score=55.61 Aligned_cols=41 Identities=12% Similarity=0.134 Sum_probs=37.3
Q ss_pred ecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEE
Q psy11104 10 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTI 50 (70)
Q Consensus 10 ~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~ 50 (70)
-..|.+.+..+.|+-||.++||.|+|.++|+|++++.+...
T Consensus 171 l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~ 211 (967)
T KOG0974|consen 171 LKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLG 211 (967)
T ss_pred ecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccC
Confidence 34688999999999999999999999999999999988665
No 153
>KOG0301|consensus
Probab=97.15 E-value=0.00082 Score=53.61 Aligned_cols=41 Identities=22% Similarity=0.284 Sum_probs=35.1
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEE
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIM 51 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~ 51 (70)
.+|...|++++..+++..++|+|+|+++|||+.....++|+
T Consensus 216 ~ghtn~vYsis~~~~~~~Ivs~gEDrtlriW~~~e~~q~I~ 256 (745)
T KOG0301|consen 216 HGHTNFVYSISMALSDGLIVSTGEDRTLRIWKKDECVQVIT 256 (745)
T ss_pred eccceEEEEEEecCCCCeEEEecCCceEEEeecCceEEEEe
Confidence 37899999999888899999999999999999885555544
No 154
>KOG0771|consensus
Probab=97.14 E-value=0.00044 Score=52.05 Aligned_cols=35 Identities=20% Similarity=0.319 Sum_probs=32.6
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~ 47 (70)
.|.+.|.+++|+|||++||+-|.| ..+||+.+++.
T Consensus 184 ~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~ 218 (398)
T KOG0771|consen 184 AHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGA 218 (398)
T ss_pred hhcCccccceeCCCCcEEEEecCC-ceEEEEeccCc
Confidence 588999999999999999999999 99999998883
No 155
>KOG0310|consensus
Probab=97.12 E-value=0.0013 Score=50.64 Aligned_cols=42 Identities=17% Similarity=0.283 Sum_probs=36.3
Q ss_pred CCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCCeEEEEE
Q psy11104 12 PNNTKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTVSLTIMII 53 (70)
Q Consensus 12 ~~~~~V~~va~spd-g~~LasGg~Dg~IklWdi~~~~~~~~~~ 53 (70)
+|..+|..+-|+|+ +.++++|++|+.+++||+.+....+.+.
T Consensus 108 ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~ 150 (487)
T KOG0310|consen 108 AHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELS 150 (487)
T ss_pred hccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEec
Confidence 79999999999998 7789999999999999999988643333
No 156
>KOG0308|consensus
Probab=97.11 E-value=0.00083 Score=53.44 Aligned_cols=49 Identities=18% Similarity=0.205 Sum_probs=42.6
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEeccccccc
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQERNLQ 61 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~~~~ 61 (70)
++...|+++|-|++|..|++||..+-+|+||.+++++...+. +|+.|+.
T Consensus 169 G~k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~~kimkLr-GHTdNVr 217 (735)
T KOG0308|consen 169 GPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLR-GHTDNVR 217 (735)
T ss_pred CCccceeeeecCCcceEEEecCcccceEEeccccccceeeee-ccccceE
Confidence 567789999999999999999999999999999999988887 4444544
No 157
>KOG0278|consensus
Probab=97.11 E-value=0.0016 Score=47.59 Aligned_cols=43 Identities=12% Similarity=0.200 Sum_probs=37.5
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
+|.+.|..+-|-...+.|.|.++|++||+||.+++..+-++..
T Consensus 141 ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL~~ 183 (334)
T KOG0278|consen 141 GHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQSLEF 183 (334)
T ss_pred CCCCcceeEEEeccCceEEeeccCCceEEEEeccCcEEEEEec
Confidence 5888999999988878888889999999999999988776654
No 158
>KOG0303|consensus
Probab=97.09 E-value=0.00032 Score=53.33 Aligned_cols=43 Identities=16% Similarity=0.330 Sum_probs=38.8
Q ss_pred cCCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCCeEEEEE
Q psy11104 11 IPNNTKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTVSLTIMII 53 (70)
Q Consensus 11 ~~~~~~V~~va~spd-g~~LasGg~Dg~IklWdi~~~~~~~~~~ 53 (70)
.+|...|.-|+|||. .+.|+|+|.|.+|.+||+.++...+++.
T Consensus 128 ~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~tgeali~l~ 171 (472)
T KOG0303|consen 128 YGHQRRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGTGEALITLD 171 (472)
T ss_pred eecceeEEEEeecccchhhHhhccCCceEEEEeccCCceeeecC
Confidence 368999999999999 7889999999999999999999887755
No 159
>KOG2445|consensus
Probab=97.08 E-value=0.00064 Score=50.36 Aligned_cols=38 Identities=24% Similarity=0.436 Sum_probs=33.0
Q ss_pred eeeeec--CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEC
Q psy11104 6 SKKIAI--PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKL 43 (70)
Q Consensus 6 ~~~I~~--~~~~~V~~va~spdg~~LasGg~Dg~IklWdi 43 (70)
..+|.. +|+++|+.+.||--|..|+|.|+||+||+|.-
T Consensus 278 v~~vs~~~~H~~~VWrv~wNmtGtiLsStGdDG~VRLWka 317 (361)
T KOG2445|consen 278 VEKVSELDDHNGEVWRVRWNMTGTILSSTGDDGCVRLWKA 317 (361)
T ss_pred eEEeeeccCCCCceEEEEEeeeeeEEeecCCCceeeehhh
Confidence 344542 79999999999999999999999999999974
No 160
>KOG1524|consensus
Probab=97.06 E-value=0.00011 Score=57.73 Aligned_cols=47 Identities=15% Similarity=0.333 Sum_probs=36.7
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEeccccc
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQERN 59 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~~ 59 (70)
+|.+.+.|-.|||||.-|.|.|+||.||+|. +++....++..+.|..
T Consensus 102 AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWS-rsGMLRStl~Q~~~~v 148 (737)
T KOG1524|consen 102 AHAAAISSGRWSPDGAGLLTAGEDGVIKIWS-RSGMLRSTVVQNEESI 148 (737)
T ss_pred hhhhhhhhcccCCCCceeeeecCCceEEEEe-ccchHHHHHhhcCcee
Confidence 6899999999999999999999999999998 5554444433444433
No 161
>KOG0313|consensus
Probab=97.06 E-value=0.0015 Score=49.37 Aligned_cols=43 Identities=21% Similarity=0.207 Sum_probs=37.8
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEec
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILF 55 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~ 55 (70)
+|.++|.+|.|++ ...+.|+|.|.+||.||+.++....++.-.
T Consensus 258 GHt~~Vs~V~w~d-~~v~yS~SwDHTIk~WDletg~~~~~~~~~ 300 (423)
T KOG0313|consen 258 GHTEPVSSVVWSD-ATVIYSVSWDHTIKVWDLETGGLKSTLTTN 300 (423)
T ss_pred ccccceeeEEEcC-CCceEeecccceEEEEEeecccceeeeecC
Confidence 6999999999987 788999999999999999999877665554
No 162
>KOG0300|consensus
Probab=97.05 E-value=0.0012 Score=49.66 Aligned_cols=43 Identities=16% Similarity=0.312 Sum_probs=35.2
Q ss_pred eecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEE
Q psy11104 9 IAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMI 52 (70)
Q Consensus 9 I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~ 52 (70)
+.-+|...|.++.|+.+ ..++|||+|.+||+||+++-+.++..
T Consensus 352 VFQGHtdtVTS~vF~~d-d~vVSgSDDrTvKvWdLrNMRsplAT 394 (481)
T KOG0300|consen 352 VFQGHTDTVTSVVFNTD-DRVVSGSDDRTVKVWDLRNMRSPLAT 394 (481)
T ss_pred eecccccceeEEEEecC-CceeecCCCceEEEeeeccccCccee
Confidence 44589999999999865 67899999999999999876655443
No 163
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=97.03 E-value=0.0041 Score=40.46 Aligned_cols=41 Identities=24% Similarity=0.308 Sum_probs=34.5
Q ss_pred eecCCCCCeEEEEEcCCCCEEEEEeC-CCcEEEEECCCCCeE
Q psy11104 9 IAIPNNTKVNCLAWHQNQGWIAVGGD-DGLLKVLKLDTVSLT 49 (70)
Q Consensus 9 I~~~~~~~V~~va~spdg~~LasGg~-Dg~IklWdi~~~~~~ 49 (70)
....|...|.+++|+|++.++++++. |+.+++|+.......
T Consensus 150 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (466)
T COG2319 150 TLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPL 191 (466)
T ss_pred EEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceE
Confidence 34478899999999999999999986 999999999874433
No 164
>KOG4640|consensus
Probab=97.02 E-value=0.0016 Score=51.55 Aligned_cols=39 Identities=21% Similarity=0.420 Sum_probs=32.8
Q ss_pred CCCCeE-EEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEE
Q psy11104 13 NNTKVN-CLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIM 51 (70)
Q Consensus 13 ~~~~V~-~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~ 51 (70)
++-.+. +++|.|||++||.|-.||+|++-|+.++...-.
T Consensus 60 p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~~ 99 (665)
T KOG4640|consen 60 PGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLVS 99 (665)
T ss_pred CCCccceeeeecCCCCEEEEEecCCeEEEEEccCCCceec
Confidence 455566 999999999999999999999999988764433
No 165
>KOG2394|consensus
Probab=97.01 E-value=0.00063 Score=53.29 Aligned_cols=34 Identities=26% Similarity=0.544 Sum_probs=31.0
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCe
Q psy11104 15 TKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSL 48 (70)
Q Consensus 15 ~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~ 48 (70)
+.|+..+|+|||++||+.|.||.+||+|..+.+.
T Consensus 291 g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eL 324 (636)
T KOG2394|consen 291 GSINEFAFSPDGKYLATVSQDGFLRIFDFDTQEL 324 (636)
T ss_pred ccccceeEcCCCceEEEEecCceEEEeeccHHHH
Confidence 5799999999999999999999999999887653
No 166
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=96.99 E-value=0.0028 Score=41.24 Aligned_cols=38 Identities=32% Similarity=0.502 Sum_probs=31.5
Q ss_pred CCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEECCCCCeE
Q psy11104 12 PNNTKVNCLAWHQNQG-WIAVGGDDGLLKVLKLDTVSLT 49 (70)
Q Consensus 12 ~~~~~V~~va~spdg~-~LasGg~Dg~IklWdi~~~~~~ 49 (70)
.|...|.+++|+|++. .+++++.|+.|++||...+...
T Consensus 196 ~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~~~~~~ 234 (466)
T COG2319 196 GHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLL 234 (466)
T ss_pred cCCCceEEEEEcCCcceEEEEecCCCcEEEEECCCCcEE
Confidence 4789999999999987 6777799999999988744433
No 167
>KOG1445|consensus
Probab=96.98 E-value=0.00026 Score=56.74 Aligned_cols=51 Identities=20% Similarity=0.283 Sum_probs=44.1
Q ss_pred eeecCCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCCeEEEEEecccc
Q psy11104 8 KIAIPNNTKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTVSLTIMIILFQER 58 (70)
Q Consensus 8 ~I~~~~~~~V~~va~spd-g~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~ 58 (70)
+|-+.|...|.++.|||- ...||+++.|-+|+|||+++.+.-+++..+..+
T Consensus 671 ~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~~~~l~gHtdq 722 (1012)
T KOG1445|consen 671 KILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLANAKLYSRLVGHTDQ 722 (1012)
T ss_pred eeeecccceEEEEEecchhhhHhhhhhccceeeeeehhhhhhhheeccCcCc
Confidence 455678999999999998 789999999999999999999888877766544
No 168
>KOG3914|consensus
Probab=96.96 E-value=0.00085 Score=50.43 Aligned_cols=37 Identities=16% Similarity=0.234 Sum_probs=32.6
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeE
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLT 49 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~ 49 (70)
+|...|..++.-++ +.|+|||.|+++++||+.++++.
T Consensus 192 GH~eFVS~isl~~~-~~LlS~sGD~tlr~Wd~~sgk~L 228 (390)
T KOG3914|consen 192 GHKEFVSTISLTDN-YLLLSGSGDKTLRLWDITSGKLL 228 (390)
T ss_pred ccHhheeeeeeccC-ceeeecCCCCcEEEEecccCCcc
Confidence 68888999998765 66999999999999999999876
No 169
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=96.93 E-value=0.0048 Score=40.72 Aligned_cols=37 Identities=8% Similarity=0.056 Sum_probs=29.0
Q ss_pred CCeEEEEEcCCCCEEE-EEeCCCcEEEEECCCCCeEEE
Q psy11104 15 TKVNCLAWHQNQGWIA-VGGDDGLLKVLKLDTVSLTIM 51 (70)
Q Consensus 15 ~~V~~va~spdg~~La-sGg~Dg~IklWdi~~~~~~~~ 51 (70)
....+++|+|+|++|+ ++..||.|++||+++++..-.
T Consensus 157 ~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~ 194 (300)
T TIGR03866 157 QRPRFAEFTADGKELWVSSEIGGTVSVIDVATRKVIKK 194 (300)
T ss_pred CCccEEEECCCCCEEEEEcCCCCEEEEEEcCcceeeee
Confidence 3567899999999874 555799999999998765443
No 170
>KOG0322|consensus
Probab=96.93 E-value=0.0011 Score=48.49 Aligned_cols=51 Identities=14% Similarity=0.126 Sum_probs=39.2
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEecccccccccCCC
Q psy11104 16 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQERNLQDKLPP 66 (70)
Q Consensus 16 ~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~~~~~~~~~ 66 (70)
.|..+.+-||++.+||+|-||.||+++.++..--..+..+.....+.+|.|
T Consensus 253 Gv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfsp 303 (323)
T KOG0322|consen 253 GVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSP 303 (323)
T ss_pred CccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCC
Confidence 578899999999999999999999999998875555444443444445554
No 171
>KOG2055|consensus
Probab=96.91 E-value=0.0016 Score=50.12 Aligned_cols=31 Identities=35% Similarity=0.774 Sum_probs=28.6
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy11104 14 NTKVNCLAWHQNQGWIAVGGDDGLLKVLKLD 44 (70)
Q Consensus 14 ~~~V~~va~spdg~~LasGg~Dg~IklWdi~ 44 (70)
-+.|+|++|||+|.++|.|.++|.+.+|.+.
T Consensus 482 vg~vtc~aFSP~sG~lAvGNe~grv~l~kL~ 512 (514)
T KOG2055|consen 482 VGHVTCMAFSPNSGYLAVGNEAGRVHLFKLH 512 (514)
T ss_pred ccceEEEEecCCCceEEeecCCCceeeEeec
Confidence 4679999999999999999999999999874
No 172
>KOG0771|consensus
Probab=96.90 E-value=0.00076 Score=50.80 Aligned_cols=30 Identities=27% Similarity=0.507 Sum_probs=26.6
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy11104 18 NCLAWHQNQGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 18 ~~va~spdg~~LasGg~Dg~IklWdi~~~~ 47 (70)
.+++|+++|..||+|+.||++|+|+..+..
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~ 177 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPSML 177 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCcch
Confidence 789999999999999999999999954433
No 173
>KOG2106|consensus
Probab=96.87 E-value=0.0034 Score=49.14 Aligned_cols=38 Identities=13% Similarity=0.358 Sum_probs=33.4
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEE
Q psy11104 14 NTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIM 51 (70)
Q Consensus 14 ~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~ 51 (70)
+.++++++|+|+|.+||.|+.|+.|.|+.+..+.....
T Consensus 447 ~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~ 484 (626)
T KOG2106|consen 447 NEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYS 484 (626)
T ss_pred CCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEE
Confidence 78999999999999999999999999999876654443
No 174
>KOG1523|consensus
Probab=96.86 E-value=0.0023 Score=47.60 Aligned_cols=64 Identities=13% Similarity=0.136 Sum_probs=50.0
Q ss_pred EeeeeeecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEC-CCCC--eEEEEEecccccccccCCCC
Q psy11104 4 YLSKKIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKL-DTVS--LTIMIILFQERNLQDKLPPL 67 (70)
Q Consensus 4 ~~~~~I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi-~~~~--~~~~~~~~~~~~~~~~~~~~ 67 (70)
|...|....|...|++|+|+|.++.|++|+.|..-++|.. ..++ .++.+...+-++++.+--|.
T Consensus 45 w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~~~WkptlvLlRiNrAAt~V~WsP~ 111 (361)
T KOG1523|consen 45 WEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGGTWKPTLVLLRINRAATCVKWSPK 111 (361)
T ss_pred ceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccCCCCeeccceeEEEeccceeeEeecCc
Confidence 5666777789999999999999999999999999999998 4444 44555555556666665554
No 175
>KOG0270|consensus
Probab=96.81 E-value=0.0034 Score=48.01 Aligned_cols=34 Identities=24% Similarity=0.415 Sum_probs=31.5
Q ss_pred CCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCC
Q psy11104 12 PNNTKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDT 45 (70)
Q Consensus 12 ~~~~~V~~va~spd-g~~LasGg~Dg~IklWdi~~ 45 (70)
-|++.|.+++|+|. ++.|.+||.||+|++.|.+.
T Consensus 284 ~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~ 318 (463)
T KOG0270|consen 284 HHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRD 318 (463)
T ss_pred hcCCceeEEEecCCCceEEEeccccceEEeeeccC
Confidence 48899999999998 88999999999999999983
No 176
>KOG0641|consensus
Probab=96.81 E-value=0.0023 Score=46.47 Aligned_cols=36 Identities=14% Similarity=0.326 Sum_probs=33.7
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTV 46 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~ 46 (70)
.||...|+||.|||...++.+|+.|.+||+-|++.+
T Consensus 270 ~phsadir~vrfsp~a~yllt~syd~~ikltdlqgd 305 (350)
T KOG0641|consen 270 HPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGD 305 (350)
T ss_pred CCCccceeEEEeCCCceEEEEecccceEEEeecccc
Confidence 489999999999999999999999999999998764
No 177
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=96.78 E-value=0.0054 Score=47.91 Aligned_cols=42 Identities=19% Similarity=0.295 Sum_probs=35.9
Q ss_pred eeeecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCe
Q psy11104 7 KKIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSL 48 (70)
Q Consensus 7 ~~I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~ 48 (70)
.-++.+..+.|.|.++||+.+.++.|++||+|.+||...+..
T Consensus 252 svtsipL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t 293 (545)
T PF11768_consen 252 SVTSIPLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVT 293 (545)
T ss_pred EEEEEecCCcceEEecCcccceEEEEecCCeEEEEEcCCCee
Confidence 334557889999999999999999999999999999876643
No 178
>KOG1273|consensus
Probab=96.78 E-value=0.0012 Score=49.28 Aligned_cols=32 Identities=22% Similarity=0.526 Sum_probs=29.6
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEECCCCCe
Q psy11104 17 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSL 48 (70)
Q Consensus 17 V~~va~spdg~~LasGg~Dg~IklWdi~~~~~ 48 (70)
-+|+.||+.|.+||.|..||.|-|||..+...
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~i 57 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRI 57 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEccccch
Confidence 68999999999999999999999999988763
No 179
>KOG1188|consensus
Probab=96.77 E-value=0.0018 Score=48.42 Aligned_cols=44 Identities=9% Similarity=0.077 Sum_probs=35.0
Q ss_pred CCCCCeEEEEEcCC--CCEEEEEeCCCcEEEEECCCCCeEEEEEec
Q psy11104 12 PNNTKVNCLAWHQN--QGWIAVGGDDGLLKVLKLDTVSLTIMIILF 55 (70)
Q Consensus 12 ~~~~~V~~va~spd--g~~LasGg~Dg~IklWdi~~~~~~~~~~~~ 55 (70)
.+...++.+.|..+ +..+.||+.||+||+||+++..+..++.-.
T Consensus 68 ~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~ 113 (376)
T KOG1188|consen 68 GPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWT 113 (376)
T ss_pred CCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheecc
Confidence 46677888888763 567899999999999999998877765543
No 180
>KOG1063|consensus
Probab=96.77 E-value=0.0019 Score=51.66 Aligned_cols=37 Identities=11% Similarity=0.135 Sum_probs=33.0
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~ 47 (70)
..|+-.|+.++|||||++|++.|.|.++.+|..+.+.
T Consensus 569 ~~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~~~~~~~ 605 (764)
T KOG1063|consen 569 EGHSLTVTRLAFSPDGRYLLSVSRDRTVSLYEVQEDI 605 (764)
T ss_pred cccceEEEEEEECCCCcEEEEeecCceEEeeeeeccc
Confidence 4688899999999999999999999999999875443
No 181
>KOG1240|consensus
Probab=96.76 E-value=0.0015 Score=54.97 Aligned_cols=33 Identities=30% Similarity=0.394 Sum_probs=28.7
Q ss_pred CCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECC
Q psy11104 12 PNNTKVNCLAWHQN-QGWIAVGGDDGLLKVLKLD 44 (70)
Q Consensus 12 ~~~~~V~~va~spd-g~~LasGg~Dg~IklWdi~ 44 (70)
.|.+.|+.++-++. +.+++|||+||+||+||.+
T Consensus 1046 Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~ 1079 (1431)
T KOG1240|consen 1046 EHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLR 1079 (1431)
T ss_pred hccccccceeecCCCCceEEEecCCceEEEeeeh
Confidence 46778888888877 6999999999999999964
No 182
>KOG0290|consensus
Probab=96.72 E-value=0.0055 Score=45.43 Aligned_cols=42 Identities=19% Similarity=0.329 Sum_probs=35.1
Q ss_pred eeecCCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEECCCCCeE
Q psy11104 8 KIAIPNNTKVNCLAWHQNQ-GWIAVGGDDGLLKVLKLDTVSLT 49 (70)
Q Consensus 8 ~I~~~~~~~V~~va~spdg-~~LasGg~Dg~IklWdi~~~~~~ 49 (70)
+=-.+|...|..|+|...+ +.+||.|.||++|++|++.-+-.
T Consensus 190 TQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHS 232 (364)
T KOG0290|consen 190 TQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHS 232 (364)
T ss_pred eEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccc
Confidence 3345899999999999874 68999999999999999876533
No 183
>KOG1036|consensus
Probab=96.71 E-value=0.0027 Score=46.69 Aligned_cols=34 Identities=15% Similarity=0.358 Sum_probs=31.0
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDT 45 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~ 45 (70)
.|...|.||++++--..+++||.|++||+||.+.
T Consensus 92 th~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~ 125 (323)
T KOG1036|consen 92 THDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRN 125 (323)
T ss_pred cCCCceEEEEeeccCCeEEEcccCccEEEEeccc
Confidence 5888999999999888899999999999999874
No 184
>KOG0299|consensus
Probab=96.70 E-value=0.0055 Score=47.08 Aligned_cols=46 Identities=20% Similarity=0.297 Sum_probs=37.8
Q ss_pred eeeeecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEE
Q psy11104 6 SKKIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMI 52 (70)
Q Consensus 6 ~~~I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~ 52 (70)
++-|..++.+.+.|++|= |..+++|||+||.|.||++...+..++.
T Consensus 319 sqlifrg~~~sidcv~~I-n~~HfvsGSdnG~IaLWs~~KKkplf~~ 364 (479)
T KOG0299|consen 319 SQLIFRGGEGSIDCVAFI-NDEHFVSGSDNGSIALWSLLKKKPLFTS 364 (479)
T ss_pred ceeeeeCCCCCeeeEEEe-cccceeeccCCceEEEeeecccCceeEe
Confidence 345777889999999995 5689999999999999998877655543
No 185
>KOG2111|consensus
Probab=96.67 E-value=0.0035 Score=46.49 Aligned_cols=34 Identities=29% Similarity=0.737 Sum_probs=30.5
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy11104 14 NTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 14 ~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~ 47 (70)
...|.|++||||+.+||..|+.|++.|+.++...
T Consensus 226 ~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~~~~ 259 (346)
T KOG2111|consen 226 RADIYCIAFSPNSSWLAVSSDKGTLHIFSLRDTE 259 (346)
T ss_pred hheEEEEEeCCCccEEEEEcCCCeEEEEEeecCC
Confidence 4579999999999999999999999999987644
No 186
>KOG0646|consensus
Probab=96.66 E-value=0.0023 Score=49.05 Aligned_cols=32 Identities=25% Similarity=0.512 Sum_probs=30.2
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEC
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKL 43 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi 43 (70)
+|=+.|+|+.|+-||.+|+|||.||.|.+|.+
T Consensus 121 aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l 152 (476)
T KOG0646|consen 121 AHYQSITCLKFSDDGSHIITGSKDGAVLVWLL 152 (476)
T ss_pred hhccceeEEEEeCCCcEEEecCCCccEEEEEE
Confidence 68889999999999999999999999999975
No 187
>KOG4328|consensus
Probab=96.61 E-value=0.0039 Score=48.00 Aligned_cols=44 Identities=16% Similarity=0.211 Sum_probs=35.5
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECC---CCCeEEEEEec
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLD---TVSLTIMIILF 55 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~---~~~~~~~~~~~ 55 (70)
+|+..|++..|||.+..|+|-+.|..|||||.. ...+....+.+
T Consensus 367 ~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~~~p~~~I~H 413 (498)
T KOG4328|consen 367 PHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISAKDEPLGTIPH 413 (498)
T ss_pred cccceeeeeEEcCCCCceEeeccCCceEEeecccccccCCccceeec
Confidence 789999999999997779999999999999974 44444444444
No 188
>KOG0639|consensus
Probab=96.54 E-value=0.0022 Score=50.33 Aligned_cols=38 Identities=13% Similarity=0.211 Sum_probs=35.5
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeE
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLT 49 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~ 49 (70)
+|.+.+.||+.++||..|=|||-|++||-||++++++.
T Consensus 549 GhtDGascIdis~dGtklWTGGlDntvRcWDlregrql 586 (705)
T KOG0639|consen 549 GHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQL 586 (705)
T ss_pred CCCCCceeEEecCCCceeecCCCccceeehhhhhhhhh
Confidence 78999999999999999999999999999999988754
No 189
>KOG1963|consensus
Probab=96.53 E-value=0.0037 Score=50.52 Aligned_cols=42 Identities=24% Similarity=0.490 Sum_probs=36.9
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 13 NNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 13 ~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
|...|++++|++||.+|.|||..|-.-+|..++++...-.+.
T Consensus 250 H~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~kqfLPRL 291 (792)
T KOG1963|consen 250 HHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGKKQFLPRL 291 (792)
T ss_pred cccccceeEEecCCceEeecccceEEEEEeecCCCccccccc
Confidence 778999999999999999999999999999998886554443
No 190
>KOG0288|consensus
Probab=96.45 E-value=0.0025 Score=48.60 Aligned_cols=51 Identities=10% Similarity=0.233 Sum_probs=41.9
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEeccccccccc
Q psy11104 13 NNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQERNLQDK 63 (70)
Q Consensus 13 ~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~~~~~~ 63 (70)
..+.|+.++|.+++.++++.+.|+.+++|++.+.+..-++..+++..++.+
T Consensus 218 s~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~~r~~~TLsGHtdkVt~ak 268 (459)
T KOG0288|consen 218 SLGNITSIDFDSDNKHVIAASNDKNLRLWNVDSLRLRHTLSGHTDKVTAAK 268 (459)
T ss_pred cCCCcceeeecCCCceEEeecCCCceeeeeccchhhhhhhcccccceeeeh
Confidence 356799999999999999999999999999999887777776655544444
No 191
>KOG0642|consensus
Probab=96.43 E-value=0.0041 Score=48.69 Aligned_cols=45 Identities=13% Similarity=0.082 Sum_probs=37.3
Q ss_pred eeecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEE
Q psy11104 8 KIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMII 53 (70)
Q Consensus 8 ~I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~ 53 (70)
.+..+|.+.|+.+++|+....|++|+.||++|+|+...... |++.
T Consensus 390 ~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~-~~f~ 434 (577)
T KOG0642|consen 390 GTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESP-CTFG 434 (577)
T ss_pred cceeccccceeeeeecccccceeeecCCceEEeeccCCcCc-cccC
Confidence 44558999999999999988999999999999999766554 4433
No 192
>KOG0321|consensus
Probab=96.39 E-value=0.0044 Score=49.34 Aligned_cols=39 Identities=15% Similarity=0.235 Sum_probs=30.5
Q ss_pred CCCCCeEE---EEEcCCCCEEEEEeC-CCcEEEEECCCCCeEE
Q psy11104 12 PNNTKVNC---LAWHQNQGWIAVGGD-DGLLKVLKLDTVSLTI 50 (70)
Q Consensus 12 ~~~~~V~~---va~spdg~~LasGg~-Dg~IklWdi~~~~~~~ 50 (70)
+++..|.+ +-+..|..+|||+|. |+.||+||++......
T Consensus 212 A~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~ 254 (720)
T KOG0321|consen 212 AASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAY 254 (720)
T ss_pred cccCceeeeeEEEEEeccceeeeccCCCcceEEEeeccccccc
Confidence 45555655 666789999999988 9999999998776544
No 193
>KOG0321|consensus
Probab=96.36 E-value=0.0025 Score=50.68 Aligned_cols=39 Identities=13% Similarity=0.239 Sum_probs=33.8
Q ss_pred eecCCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCC
Q psy11104 9 IAIPNNTKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 9 I~~~~~~~V~~va~spd-g~~LasGg~Dg~IklWdi~~~~ 47 (70)
..++|.+.|.++||+|. ...+++||.||.|.|||++-..
T Consensus 139 ~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~ 178 (720)
T KOG0321|consen 139 LNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNG 178 (720)
T ss_pred eecccccccchhhhccCCCcceeeccCCCcEEEEEEeccc
Confidence 45689999999999997 6679999999999999986543
No 194
>KOG2055|consensus
Probab=96.29 E-value=0.0079 Score=46.47 Aligned_cols=39 Identities=23% Similarity=0.460 Sum_probs=33.8
Q ss_pred eecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy11104 9 IAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 9 I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~ 47 (70)
+..+..+.|+||.|||..++|.+||.||+++|+.++...
T Consensus 208 a~~ps~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~ 246 (514)
T KOG2055|consen 208 AAHPSHGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKV 246 (514)
T ss_pred cCCcCcCCceEEEecCCCceEEEecCCCcEEEEEecCcc
Confidence 334567889999999999999999999999999987655
No 195
>KOG1408|consensus
Probab=96.29 E-value=0.0076 Score=49.13 Aligned_cols=56 Identities=9% Similarity=-0.033 Sum_probs=50.3
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEecccccccccCCC
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQERNLQDKLPP 66 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~~~~~~~~~ 66 (70)
..|.+..--|...|.|.|||+...|+++.++|..+++++.++..+.|..+-.+|.|
T Consensus 638 ~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~m~GHsE~VTG~kF~n 693 (1080)
T KOG1408|consen 638 RDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQMTGHSEAVTGVKFLN 693 (1080)
T ss_pred ccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhhhhhcCcchheeeeeecc
Confidence 35667888999999999999999999999999999999999999999877777654
No 196
>KOG0300|consensus
Probab=96.27 E-value=0.0025 Score=47.94 Aligned_cols=32 Identities=16% Similarity=0.247 Sum_probs=30.5
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLK 42 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWd 42 (70)
.+|.+.|+||.|++.+.+++++|.|++..||.
T Consensus 187 ~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~ 218 (481)
T KOG0300|consen 187 TGHTGSVNSIKFHNSGLLLLTASGDETAHIWK 218 (481)
T ss_pred cccccceeeEEeccccceEEEccCCcchHHHH
Confidence 37999999999999999999999999999997
No 197
>KOG0644|consensus
Probab=96.26 E-value=0.003 Score=51.89 Aligned_cols=43 Identities=21% Similarity=0.348 Sum_probs=37.2
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
.|...|+|+.|...|.+|++|++|..+|||...+..+-.+...
T Consensus 188 gH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rG 230 (1113)
T KOG0644|consen 188 GHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRG 230 (1113)
T ss_pred hhhhheeeeeeccccceEeecCccceeeeeeccchhhhccCCC
Confidence 6888999999999999999999999999999777766555444
No 198
>KOG0301|consensus
Probab=96.22 E-value=0.0075 Score=48.31 Aligned_cols=45 Identities=22% Similarity=0.162 Sum_probs=39.0
Q ss_pred CeEEeeeeeecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Q psy11104 1 MFIYLSKKIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTV 46 (70)
Q Consensus 1 ~~~~~~~~I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~ 46 (70)
|..|..+++..+|++.|..++..+ +..+++||.||++|+|+-...
T Consensus 1 ~~~Y~ls~~l~gH~~DVr~v~~~~-~~~i~s~sRd~t~~vw~~~~~ 45 (745)
T KOG0301|consen 1 MPQYKLSHELEGHKSDVRAVAVTD-GVCIISGSRDGTVKVWAKKGK 45 (745)
T ss_pred CCcceeEEEeccCccchheeEecC-CeEEeecCCCCceeeeeccCc
Confidence 678999999999999999999875 458999999999999986443
No 199
>KOG0639|consensus
Probab=96.10 E-value=0.0042 Score=48.82 Aligned_cols=43 Identities=16% Similarity=0.081 Sum_probs=34.6
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEeccc
Q psy11104 15 TKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQE 57 (70)
Q Consensus 15 ~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~ 57 (70)
...++++.|||.+...+|..||.|+|||+.++..+=.+..+..
T Consensus 510 paCyALa~spDakvcFsccsdGnI~vwDLhnq~~VrqfqGhtD 552 (705)
T KOG0639|consen 510 PACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTD 552 (705)
T ss_pred hhhhhhhcCCccceeeeeccCCcEEEEEcccceeeecccCCCC
Confidence 3567899999999999999999999999998876555444433
No 200
>PRK01742 tolB translocation protein TolB; Provisional
Probab=96.08 E-value=0.019 Score=42.18 Aligned_cols=37 Identities=16% Similarity=0.140 Sum_probs=30.1
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCC---CcEEEEECCCCCe
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDD---GLLKVLKLDTVSL 48 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~D---g~IklWdi~~~~~ 48 (70)
.+...+.+.+|||||+.||..+.+ ..|++||+.++..
T Consensus 201 ~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~ 240 (429)
T PRK01742 201 RSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGAR 240 (429)
T ss_pred cCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCce
Confidence 456679999999999999987654 3699999987753
No 201
>KOG1064|consensus
Probab=96.08 E-value=0.0081 Score=52.63 Aligned_cols=38 Identities=13% Similarity=0.259 Sum_probs=34.5
Q ss_pred ecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy11104 10 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 10 ~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~ 47 (70)
.+.|.+.++|+++-|..++|+|||.+|.|++||++..+
T Consensus 2332 ~~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrq 2369 (2439)
T KOG1064|consen 2332 HTCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQ 2369 (2439)
T ss_pred eeecCCCceEEEEcCcceEEEecCCcCcEEEeehHHHH
Confidence 37899999999999999999999999999999987544
No 202
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=95.99 E-value=0.034 Score=30.03 Aligned_cols=31 Identities=13% Similarity=0.324 Sum_probs=27.0
Q ss_pred CCeEEEEEcCC-C--CEEEEEeCCCcEEEEECCC
Q psy11104 15 TKVNCLAWHQN-Q--GWIAVGGDDGLLKVLKLDT 45 (70)
Q Consensus 15 ~~V~~va~spd-g--~~LasGg~Dg~IklWdi~~ 45 (70)
+.|+++.|||. + .+||-.-.-|.|.|+|+++
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 46899999986 5 6999988899999999985
No 203
>KOG2106|consensus
Probab=95.96 E-value=0.013 Score=46.06 Aligned_cols=53 Identities=11% Similarity=0.110 Sum_probs=38.0
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEecccccccccCCC
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQERNLQDKLPP 66 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~~~~~~~~~ 66 (70)
..|....+.++-+|+.+.++|+|.|+.++||+ +.+..=-....+-..+.+|-|
T Consensus 365 ~gh~delwgla~hps~~q~~T~gqdk~v~lW~---~~k~~wt~~~~d~~~~~~fhp 417 (626)
T KOG2106|consen 365 QGHGDELWGLATHPSKNQLLTCGQDKHVRLWN---DHKLEWTKIIEDPAECADFHP 417 (626)
T ss_pred EecccceeeEEcCCChhheeeccCcceEEEcc---CCceeEEEEecCceeEeeccC
Confidence 36888999999999999999999999999999 222222223333444555544
No 204
>KOG3881|consensus
Probab=95.85 E-value=0.013 Score=44.39 Aligned_cols=35 Identities=14% Similarity=0.222 Sum_probs=31.9
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy11104 13 NNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 13 ~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~ 47 (70)
-.+.|.+|..+|.+++||+||-|..+||+|+++.+
T Consensus 289 ~tGsirsih~hp~~~~las~GLDRyvRIhD~ktrk 323 (412)
T KOG3881|consen 289 ITGSIRSIHCHPTHPVLASCGLDRYVRIHDIKTRK 323 (412)
T ss_pred ccCCcceEEEcCCCceEEeeccceeEEEeecccch
Confidence 35789999999999999999999999999999844
No 205
>KOG1963|consensus
Probab=95.83 E-value=0.011 Score=47.98 Aligned_cols=36 Identities=25% Similarity=0.599 Sum_probs=32.0
Q ss_pred eeeecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy11104 7 KKIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLK 42 (70)
Q Consensus 7 ~~I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWd 42 (70)
+.|.+.|.-.++|+++||++.++|+|..||.|.+|.
T Consensus 198 ~~~~~~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~ 233 (792)
T KOG1963|consen 198 RDITVHHTFNITCVALSPNERYLAAGDSDGRILVWR 233 (792)
T ss_pred chhhhhhcccceeEEeccccceEEEeccCCcEEEEe
Confidence 446667777799999999999999999999999996
No 206
>PRK05137 tolB translocation protein TolB; Provisional
Probab=95.81 E-value=0.049 Score=39.96 Aligned_cols=37 Identities=16% Similarity=0.035 Sum_probs=30.4
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeC---CCcEEEEECCCCCe
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGD---DGLLKVLKLDTVSL 48 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~---Dg~IklWdi~~~~~ 48 (70)
.+...+.+.+|+|||+.||..+. +..|.+||+.++..
T Consensus 199 ~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~ 238 (435)
T PRK05137 199 DGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQR 238 (435)
T ss_pred cCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcE
Confidence 45678999999999999988764 46899999987754
No 207
>KOG1409|consensus
Probab=95.77 E-value=0.03 Score=42.18 Aligned_cols=40 Identities=20% Similarity=0.325 Sum_probs=35.5
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEE
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTI 50 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~ 50 (70)
++|.+.+.|++|.|....|.||.+|.+|.+||+...+...
T Consensus 194 ~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~ 233 (404)
T KOG1409|consen 194 NGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTA 233 (404)
T ss_pred cCcccceEEEEEcCCCcEEEeccccCceEEEeccCCccee
Confidence 4899999999999999999999999999999987665443
No 208
>KOG0307|consensus
Probab=95.70 E-value=0.0086 Score=49.70 Aligned_cols=44 Identities=11% Similarity=0.141 Sum_probs=37.8
Q ss_pred cCCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 11 IPNNTKVNCLAWHQNQ-GWIAVGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 11 ~~~~~~V~~va~spdg-~~LasGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
..|...|.+++|++.. .+|+|+|.|+.|.+|+.++++..-.+-.
T Consensus 250 ~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~ 294 (1049)
T KOG0307|consen 250 EGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELPA 294 (1049)
T ss_pred cccccceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecCC
Confidence 4688999999999974 8999999999999999999876665444
No 209
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=95.66 E-value=0.047 Score=39.73 Aligned_cols=36 Identities=8% Similarity=0.119 Sum_probs=31.8
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~ 47 (70)
...+.|..++.||||+.||+...+|.|.||++-+-+
T Consensus 227 ~~~d~i~kmSlSPdg~~La~ih~sG~lsLW~iPsL~ 262 (282)
T PF15492_consen 227 QEQDGIFKMSLSPDGSLLACIHFSGSLSLWEIPSLR 262 (282)
T ss_pred cCCCceEEEEECCCCCEEEEEEcCCeEEEEecCcch
Confidence 346789999999999999999999999999986543
No 210
>KOG1587|consensus
Probab=95.51 E-value=0.038 Score=43.19 Aligned_cols=35 Identities=23% Similarity=0.293 Sum_probs=31.5
Q ss_pred CCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCCe
Q psy11104 14 NTKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTVSL 48 (70)
Q Consensus 14 ~~~V~~va~spd-g~~LasGg~Dg~IklWdi~~~~~ 48 (70)
.+.|.|++|+|. ..++|.|..+|.|-+||++.+..
T Consensus 242 ~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~ 277 (555)
T KOG1587|consen 242 PSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSD 277 (555)
T ss_pred CCceeEEEeccCCcceEEeeccCceEEEEEccCCCC
Confidence 578999999997 88999999999999999987665
No 211
>KOG2079|consensus
Probab=95.44 E-value=0.032 Score=46.78 Aligned_cols=44 Identities=18% Similarity=0.271 Sum_probs=36.6
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEecc
Q psy11104 13 NNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQ 56 (70)
Q Consensus 13 ~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~ 56 (70)
-.++|.+++||.||.+++.|-.+|.|.+||...++..-.+..++
T Consensus 129 v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ 172 (1206)
T KOG2079|consen 129 VQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHG 172 (1206)
T ss_pred cCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecC
Confidence 35789999999999999999999999999998877544444443
No 212
>KOG0280|consensus
Probab=95.36 E-value=0.036 Score=41.04 Aligned_cols=38 Identities=18% Similarity=0.267 Sum_probs=31.8
Q ss_pred CCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCCeEE
Q psy11104 13 NNTKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTVSLTI 50 (70)
Q Consensus 13 ~~~~V~~va~spd-g~~LasGg~Dg~IklWdi~~~~~~~ 50 (70)
|...|.||.=||. +.+||+|+.|-.|++||.++=.+++
T Consensus 209 H~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl 247 (339)
T KOG0280|consen 209 HTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPL 247 (339)
T ss_pred eecceEEEecCCCCCceEEEeccccceeeeehhcccCcc
Confidence 5677999988876 8899999999999999988655444
No 213
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=95.19 E-value=0.086 Score=36.76 Aligned_cols=32 Identities=16% Similarity=0.286 Sum_probs=27.0
Q ss_pred CCCeEEEEEcCCCCEEEEEeC-CCcEEEEECCC
Q psy11104 14 NTKVNCLAWHQNQGWIAVGGD-DGLLKVLKLDT 45 (70)
Q Consensus 14 ~~~V~~va~spdg~~LasGg~-Dg~IklWdi~~ 45 (70)
....+.++|+|+|+++.++.+ +++|.+|+++.
T Consensus 174 g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~ 206 (330)
T PRK11028 174 GAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKD 206 (330)
T ss_pred CCCCceEEECCCCCEEEEEecCCCEEEEEEEeC
Confidence 445678999999999888776 99999999974
No 214
>KOG4532|consensus
Probab=95.17 E-value=0.065 Score=39.56 Aligned_cols=36 Identities=17% Similarity=0.179 Sum_probs=30.9
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~ 47 (70)
+..+.-.+.+||.+...+|++..||++.|||++...
T Consensus 201 ~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~ 236 (344)
T KOG4532|consen 201 PTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMA 236 (344)
T ss_pred ccCCCceeeeeccCcceEEEEecCCcEEEEEecccc
Confidence 445556789999999999999999999999998765
No 215
>PRK02889 tolB translocation protein TolB; Provisional
Probab=95.09 E-value=0.085 Score=38.80 Aligned_cols=37 Identities=16% Similarity=0.114 Sum_probs=29.7
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCC---CcEEEEECCCCCe
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDD---GLLKVLKLDTVSL 48 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~D---g~IklWdi~~~~~ 48 (70)
.+...+.+.+|+|||+.||..+.+ ..|.+||+.+++.
T Consensus 193 ~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~ 232 (427)
T PRK02889 193 SSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRR 232 (427)
T ss_pred cCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCE
Confidence 456778999999999999887643 3599999988764
No 216
>KOG2315|consensus
Probab=95.08 E-value=0.051 Score=42.66 Aligned_cols=46 Identities=9% Similarity=0.152 Sum_probs=32.9
Q ss_pred CeEEeeeeee---cCCCCCeEEEEEcCCCCEEEEEe------CCCcEEEEECCCC
Q psy11104 1 MFIYLSKKIA---IPNNTKVNCLAWHQNQGWIAVGG------DDGLLKVLKLDTV 46 (70)
Q Consensus 1 ~~~~~~~~I~---~~~~~~V~~va~spdg~~LasGg------~Dg~IklWdi~~~ 46 (70)
|=+|.+.+.+ +.....-.-.+|+|||+++.|+. .|+.+|||++...
T Consensus 338 mEvwDv~n~K~i~~~~a~~tt~~eW~PdGe~flTATTaPRlrvdNg~KiwhytG~ 392 (566)
T KOG2315|consen 338 MEVWDVPNRKLIAKFKAANTTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHYTGS 392 (566)
T ss_pred eEEEeccchhhccccccCCceEEEEcCCCcEEEEEeccccEEecCCeEEEEecCc
Confidence 4467665533 33444456689999999998885 5789999997654
No 217
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=95.06 E-value=0.064 Score=39.04 Aligned_cols=32 Identities=22% Similarity=0.362 Sum_probs=28.3
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Q psy11104 15 TKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTV 46 (70)
Q Consensus 15 ~~V~~va~spdg~~LasGg~Dg~IklWdi~~~ 46 (70)
..=+-++||||+.+||.+...|+|+++|+...
T Consensus 44 PQWRkl~WSpD~tlLa~a~S~G~i~vfdl~g~ 75 (282)
T PF15492_consen 44 PQWRKLAWSPDCTLLAYAESTGTIRVFDLMGS 75 (282)
T ss_pred chheEEEECCCCcEEEEEcCCCeEEEEecccc
Confidence 34578999999999999999999999998753
No 218
>KOG2048|consensus
Probab=94.97 E-value=0.12 Score=41.38 Aligned_cols=55 Identities=16% Similarity=0.201 Sum_probs=41.0
Q ss_pred CeEEeeeeeecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEecc
Q psy11104 1 MFIYLSKKIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQ 56 (70)
Q Consensus 1 ~~~~~~~~I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~ 56 (70)
|-+++.+-+... .+.|.|+||+...+.||.|=.||.|.||+++.+=....+.-++
T Consensus 13 m~vhrcrf~d~~-Ps~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~w~~~~vi~g~ 67 (691)
T KOG2048|consen 13 MQVHRCRFVDYK-PSEIVSLAYSHKSNQLAVSRTDGNIEIWNLSNNWFLEPVIHGP 67 (691)
T ss_pred eEEEEEEEEeee-ccceEEEEEeccCCceeeeccCCcEEEEccCCCceeeEEEecC
Confidence 334455444442 4679999999999999999999999999998866555554443
No 219
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=94.96 E-value=0.052 Score=42.54 Aligned_cols=38 Identities=18% Similarity=0.507 Sum_probs=31.7
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEE
Q psy11104 16 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMII 53 (70)
Q Consensus 16 ~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~ 53 (70)
....++|||+|..++.|++-|.+.+||..-....+.+.
T Consensus 301 ~P~~iaWHp~gai~~V~s~qGelQ~FD~ALspi~~qLl 338 (545)
T PF11768_consen 301 IPTLIAWHPDGAIFVVGSEQGELQCFDMALSPIKMQLL 338 (545)
T ss_pred cceEEEEcCCCcEEEEEcCCceEEEEEeecCccceeec
Confidence 46789999999999999999999999987765544443
No 220
>KOG4714|consensus
Probab=94.93 E-value=0.03 Score=41.06 Aligned_cols=40 Identities=18% Similarity=0.220 Sum_probs=33.8
Q ss_pred CCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCCeEEE
Q psy11104 12 PNNTKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTVSLTIM 51 (70)
Q Consensus 12 ~~~~~V~~va~spd-g~~LasGg~Dg~IklWdi~~~~~~~~ 51 (70)
.|...++-|-|||. ++.|.++++||.+.-||-.+.-..+.
T Consensus 221 ahk~~i~eV~FHpk~p~~Lft~sedGslw~wdas~~~l~i~ 261 (319)
T KOG4714|consen 221 AHKAEIWEVHFHPKNPEHLFTCSEDGSLWHWDASTTFLSIS 261 (319)
T ss_pred HhhhhhhheeccCCCchheeEecCCCcEEEEcCCCceEEec
Confidence 58899999999996 89999999999999999776444443
No 221
>KOG1310|consensus
Probab=94.88 E-value=0.048 Score=43.45 Aligned_cols=39 Identities=18% Similarity=0.349 Sum_probs=34.5
Q ss_pred eeecCCCCCeEEEEEcCC--CCEEEEEeCCCcEEEEECCCC
Q psy11104 8 KIAIPNNTKVNCLAWHQN--QGWIAVGGDDGLLKVLKLDTV 46 (70)
Q Consensus 8 ~I~~~~~~~V~~va~spd--g~~LasGg~Dg~IklWdi~~~ 46 (70)
.|..+|.+.|.|+.|-|. .++++||+.|..|+++|+.+.
T Consensus 87 sI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfdl~~~ 127 (758)
T KOG1310|consen 87 SISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFDLDSS 127 (758)
T ss_pred eeecccccceeEEeeeccCCCeEEEeccCcceEEEEecccc
Confidence 467789999999999996 678999999999999999863
No 222
>KOG1007|consensus
Probab=94.85 E-value=0.052 Score=40.37 Aligned_cols=42 Identities=17% Similarity=0.261 Sum_probs=35.6
Q ss_pred EEeeeeeec------CCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECC
Q psy11104 3 IYLSKKIAI------PNNTKVNCLAWHQN-QGWIAVGGDDGLLKVLKLD 44 (70)
Q Consensus 3 ~~~~~~I~~------~~~~~V~~va~spd-g~~LasGg~Dg~IklWdi~ 44 (70)
+|.-++.+. +|...|++|.|||. .++|.|||.|..|.+|...
T Consensus 241 iWD~R~tk~pv~el~~HsHWvW~VRfn~~hdqLiLs~~SDs~V~Lsca~ 289 (370)
T KOG1007|consen 241 IWDTRKTKFPVQELPGHSHWVWAVRFNPEHDQLILSGGSDSAVNLSCAS 289 (370)
T ss_pred EEeccCCCccccccCCCceEEEEEEecCccceEEEecCCCceeEEEecc
Confidence 566666665 48899999999998 8899999999999999854
No 223
>KOG2321|consensus
Probab=94.83 E-value=0.038 Score=43.96 Aligned_cols=41 Identities=17% Similarity=0.298 Sum_probs=35.4
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 14 NTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 14 ~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
.+.+++|+.|+-..+||+|++||.|..||.++...+-.+.+
T Consensus 175 ~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv~~l~~ 215 (703)
T KOG2321|consen 175 SGELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRVGTLDA 215 (703)
T ss_pred cccceeeeecCccceEEecccCceEEEecchhhhhheeeec
Confidence 47899999999999999999999999999887766555554
No 224
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=94.73 E-value=0.22 Score=36.58 Aligned_cols=38 Identities=21% Similarity=0.299 Sum_probs=29.8
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEec
Q psy11104 18 NCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILF 55 (70)
Q Consensus 18 ~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~ 55 (70)
..+.|+|||+++...+.||.|.++|+.+.+..-++..+
T Consensus 40 ~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G 77 (369)
T PF02239_consen 40 AGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVG 77 (369)
T ss_dssp EEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-S
T ss_pred eEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecC
Confidence 45789999999988999999999999999866666554
No 225
>KOG2110|consensus
Probab=94.66 E-value=0.064 Score=40.50 Aligned_cols=32 Identities=19% Similarity=0.465 Sum_probs=28.8
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy11104 16 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 16 ~V~~va~spdg~~LasGg~Dg~IklWdi~~~~ 47 (70)
.|.+++|+|++++|++.|+-++|.++.++...
T Consensus 220 ~IySL~Fs~ds~~L~~sS~TeTVHiFKL~~~~ 251 (391)
T KOG2110|consen 220 SIYSLSFSPDSQFLAASSNTETVHIFKLEKVS 251 (391)
T ss_pred EEEEEEECCCCCeEEEecCCCeEEEEEecccc
Confidence 58899999999999999999999999986543
No 226
>KOG2139|consensus
Probab=94.62 E-value=0.073 Score=40.52 Aligned_cols=34 Identities=12% Similarity=0.314 Sum_probs=29.3
Q ss_pred CCCeEEEEEcCCCCEEEEEe-CCCcEEEEECCCCC
Q psy11104 14 NTKVNCLAWHQNQGWIAVGG-DDGLLKVLKLDTVS 47 (70)
Q Consensus 14 ~~~V~~va~spdg~~LasGg-~Dg~IklWdi~~~~ 47 (70)
+-+|.++.|++||..+++++ .|..|.|||.+++.
T Consensus 195 h~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~ 229 (445)
T KOG2139|consen 195 HNPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQ 229 (445)
T ss_pred CceeeEEEEcCCCCEEeecccCcceEEEEcCCCCC
Confidence 46899999999999999987 45699999988775
No 227
>KOG4378|consensus
Probab=94.62 E-value=0.046 Score=43.12 Aligned_cols=45 Identities=7% Similarity=0.149 Sum_probs=37.4
Q ss_pred ecCCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 10 AIPNNTKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 10 ~~~~~~~V~~va~spd-g~~LasGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
...|..+...|+|+|. ..+|+|-|.|+.|.++|+.+....-++.+
T Consensus 204 ~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~~l~y 249 (673)
T KOG4378|consen 204 SEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTDRLTY 249 (673)
T ss_pred hhhccCCcCcceecCCccceEEEecccceEEEeecccccccceeee
Confidence 3478999999999998 56799999999999999988775555544
No 228
>KOG4378|consensus
Probab=94.49 E-value=0.083 Score=41.72 Aligned_cols=52 Identities=8% Similarity=0.190 Sum_probs=40.2
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEe-cccccccccC
Q psy11104 13 NNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIIL-FQERNLQDKL 64 (70)
Q Consensus 13 ~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~-~~~~~~~~~~ 64 (70)
...+..+|+|+++|.+|+.|...|.|..+|++..+.++.++- |.....+..|
T Consensus 249 y~~Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~k~Pv~v~sah~~sVt~vaf 301 (673)
T KOG4378|consen 249 YSHPLSTVAFSECGTYLCAGNSKGELIAYDMRSTKAPVAVRSAHDASVTRVAF 301 (673)
T ss_pred ecCCcceeeecCCceEEEeecCCceEEEEecccCCCCceEeeecccceeEEEe
Confidence 346788999999999999999999999999998887665544 4333444444
No 229
>KOG4227|consensus
Probab=94.28 E-value=0.1 Score=40.47 Aligned_cols=39 Identities=13% Similarity=0.225 Sum_probs=34.7
Q ss_pred ecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCe
Q psy11104 10 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSL 48 (70)
Q Consensus 10 ~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~ 48 (70)
..+|.+.|.|++|+.-...+.||+.+|+|.+.|+.+...
T Consensus 101 ~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~HDiEt~qs 139 (609)
T KOG4227|consen 101 EHPHRSNIFSLEFDLENRFLYSGERWGTVIKHDIETKQS 139 (609)
T ss_pred cCccccceEEEEEccCCeeEecCCCcceeEeeeccccee
Confidence 347889999999999899999999999999999987653
No 230
>PRK01742 tolB translocation protein TolB; Provisional
Probab=94.27 E-value=0.093 Score=38.58 Aligned_cols=36 Identities=22% Similarity=0.133 Sum_probs=27.6
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEECC--CCCeEEEE
Q psy11104 17 VNCLAWHQNQGWIAVGGDDGLLKVLKLD--TVSLTIMI 52 (70)
Q Consensus 17 V~~va~spdg~~LasGg~Dg~IklWdi~--~~~~~~~~ 52 (70)
..+++|+|||++|+.++.||.+++|++. +++...++
T Consensus 374 ~~~~~~sPdG~~i~~~s~~g~~~~l~~~~~~G~~~~~l 411 (429)
T PRK01742 374 DESPSISPNGIMIIYSSTQGLGKVLQLVSADGRFKARL 411 (429)
T ss_pred CCCceECCCCCEEEEEEcCCCceEEEEEECCCCceEEc
Confidence 4567899999999999999999988863 34444333
No 231
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=94.21 E-value=0.14 Score=36.47 Aligned_cols=36 Identities=17% Similarity=0.097 Sum_probs=28.9
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCC---CcEEEEECCCCCe
Q psy11104 13 NNTKVNCLAWHQNQGWIAVGGDD---GLLKVLKLDTVSL 48 (70)
Q Consensus 13 ~~~~V~~va~spdg~~LasGg~D---g~IklWdi~~~~~ 48 (70)
++..+.+.+|+|||++||.++.+ ..|++||+.++..
T Consensus 188 ~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~ 226 (417)
T TIGR02800 188 SREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQR 226 (417)
T ss_pred CCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCE
Confidence 44568889999999999987654 4799999988754
No 232
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=93.89 E-value=0.32 Score=36.70 Aligned_cols=39 Identities=18% Similarity=0.201 Sum_probs=28.7
Q ss_pred CCCeEEEEEcC----CCCEEEEEeCCCcEEEEECCCCCeEEEE
Q psy11104 14 NTKVNCLAWHQ----NQGWIAVGGDDGLLKVLKLDTVSLTIMI 52 (70)
Q Consensus 14 ~~~V~~va~sp----dg~~LasGg~Dg~IklWdi~~~~~~~~~ 52 (70)
.+.+.+++.++ +..+|++-+.|+++|+||+.++.+....
T Consensus 214 ~~~~~~~~~~~~~~~~~~~l~tl~~D~~LRiW~l~t~~~~~~~ 256 (547)
T PF11715_consen 214 SSVAASLAVSSSEINDDTFLFTLSRDHTLRIWSLETGQCLATI 256 (547)
T ss_dssp ---EEEEEE-----ETTTEEEEEETTSEEEEEETTTTCEEEEE
T ss_pred CCccceEEEecceeCCCCEEEEEeCCCeEEEEECCCCeEEEEe
Confidence 34566777777 6789999999999999999999985443
No 233
>KOG1587|consensus
Probab=93.82 E-value=0.063 Score=42.00 Aligned_cols=35 Identities=23% Similarity=0.272 Sum_probs=29.4
Q ss_pred CCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCC
Q psy11104 13 NNTKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 13 ~~~~V~~va~spd-g~~LasGg~Dg~IklWdi~~~~ 47 (70)
+...|.+++|||- ...+|++..||.|.+||+....
T Consensus 440 ~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~~ 475 (555)
T KOG1587|consen 440 SPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQDD 475 (555)
T ss_pred ccceeeeeEEcCcCceEEEEEcCCCceehhhhhccc
Confidence 4456999999998 6789999999999999985443
No 234
>PRK04922 tolB translocation protein TolB; Provisional
Probab=93.54 E-value=0.15 Score=37.41 Aligned_cols=36 Identities=17% Similarity=0.124 Sum_probs=28.9
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCC---CcEEEEECCCCCe
Q psy11104 13 NNTKVNCLAWHQNQGWIAVGGDD---GLLKVLKLDTVSL 48 (70)
Q Consensus 13 ~~~~V~~va~spdg~~LasGg~D---g~IklWdi~~~~~ 48 (70)
+...+.+.+|+|||+.||..+.+ ..|.+||+.++..
T Consensus 202 ~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~ 240 (433)
T PRK04922 202 SAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQR 240 (433)
T ss_pred CCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCE
Confidence 45578899999999999988744 3699999987754
No 235
>KOG1334|consensus
Probab=93.52 E-value=0.041 Score=42.95 Aligned_cols=50 Identities=28% Similarity=0.287 Sum_probs=39.7
Q ss_pred CeEEeeeeeec-----CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEE
Q psy11104 1 MFIYLSKKIAI-----PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTI 50 (70)
Q Consensus 1 ~~~~~~~~I~~-----~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~ 50 (70)
.|+|..+.=+. +.+.-|+|+.=||.-..|||+|-|.-||||...+.+...
T Consensus 418 IFiW~K~t~eii~~MegDr~VVNCLEpHP~~PvLAsSGid~DVKIWTP~~~er~~ 472 (559)
T KOG1334|consen 418 IFIWDKKTGEIIRFMEGDRHVVNCLEPHPHLPVLASSGIDHDVKIWTPLTAERAT 472 (559)
T ss_pred EEEEecchhHHHHHhhcccceEeccCCCCCCchhhccCCccceeeecCCcccccc
Confidence 47888875443 445589999999999999999999999999976555433
No 236
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=93.49 E-value=0.18 Score=35.14 Aligned_cols=31 Identities=10% Similarity=0.235 Sum_probs=25.1
Q ss_pred CeEEEEEcCCCCEEEEEeC-CCcEEEEECCCC
Q psy11104 16 KVNCLAWHQNQGWIAVGGD-DGLLKVLKLDTV 46 (70)
Q Consensus 16 ~V~~va~spdg~~LasGg~-Dg~IklWdi~~~ 46 (70)
....++|+|||++|++++. +++|.+|+++..
T Consensus 275 ~p~~~~~~~dg~~l~va~~~~~~v~v~~~~~~ 306 (330)
T PRK11028 275 QPRGFNIDHSGKYLIAAGQKSHHISVYEIDGE 306 (330)
T ss_pred cCCceEECCCCCEEEEEEccCCcEEEEEEcCC
Confidence 4568899999999887665 899999987543
No 237
>KOG0280|consensus
Probab=93.47 E-value=0.16 Score=37.72 Aligned_cols=36 Identities=17% Similarity=0.283 Sum_probs=30.9
Q ss_pred CCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCC
Q psy11104 12 PNNTKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 12 ~~~~~V~~va~spd-g~~LasGg~Dg~IklWdi~~~~ 47 (70)
+|.-+++..+|+.. .+++-+||+||.+.-||++..+
T Consensus 163 ~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~ 199 (339)
T KOG0280|consen 163 VHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPK 199 (339)
T ss_pred ccceeeeeeecccCCCceEEecCCCceEEEEEecCCc
Confidence 67788899999876 6789999999999999999443
No 238
>KOG2919|consensus
Probab=93.38 E-value=0.07 Score=40.18 Aligned_cols=40 Identities=13% Similarity=0.173 Sum_probs=33.9
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeC-CCcEEEEECCCCCeEE
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGD-DGLLKVLKLDTVSLTI 50 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~-Dg~IklWdi~~~~~~~ 50 (70)
.+|.+.|+.+.|.++|+.|.+|+. |-.|-.||++..+.++
T Consensus 247 ggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv 287 (406)
T KOG2919|consen 247 GGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDPV 287 (406)
T ss_pred cccCCCeeeEEeccCcCeecccccCCCeEEEEeehhccchh
Confidence 368899999999999999999875 6699999998766544
No 239
>PRK00178 tolB translocation protein TolB; Provisional
Probab=93.02 E-value=0.38 Score=34.93 Aligned_cols=37 Identities=19% Similarity=0.131 Sum_probs=28.4
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCC---CcEEEEECCCCCe
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDD---GLLKVLKLDTVSL 48 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~D---g~IklWdi~~~~~ 48 (70)
.+...+...+|||||+.||..+.+ ..|.+||+++++.
T Consensus 196 ~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~ 235 (430)
T PRK00178 196 QSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRR 235 (430)
T ss_pred cCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCE
Confidence 345678899999999999876644 3688899987753
No 240
>KOG0974|consensus
Probab=92.58 E-value=0.2 Score=41.65 Aligned_cols=35 Identities=17% Similarity=0.233 Sum_probs=30.4
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~ 47 (70)
+.|...|+.+.|+|+ .|+|+|+|.+.|+|+.....
T Consensus 215 fgHsaRvw~~~~~~n--~i~t~gedctcrvW~~~~~~ 249 (967)
T KOG0974|consen 215 FGHSARVWACCFLPN--RIITVGEDCTCRVWGVNGTQ 249 (967)
T ss_pred ccccceeEEEEeccc--eeEEeccceEEEEEecccce
Confidence 469999999999998 99999999999999654433
No 241
>KOG1539|consensus
Probab=92.56 E-value=0.36 Score=39.81 Aligned_cols=43 Identities=16% Similarity=0.274 Sum_probs=34.7
Q ss_pred cCC-CCCeEEEEEcCCCC-EEEEEeCCCcEEEEECCCCCeEEEEE
Q psy11104 11 IPN-NTKVNCLAWHQNQG-WIAVGGDDGLLKVLKLDTVSLTIMII 53 (70)
Q Consensus 11 ~~~-~~~V~~va~spdg~-~LasGg~Dg~IklWdi~~~~~~~~~~ 53 (70)
+.| .++|.+++|.-||+ ++|+|+..|.+-+||++..+..-.+.
T Consensus 240 Fk~d~g~VtslSFrtDG~p~las~~~~G~m~~wDLe~kkl~~v~~ 284 (910)
T KOG1539|consen 240 FKQDWGRVTSLSFRTDGNPLLASGRSNGDMAFWDLEKKKLINVTR 284 (910)
T ss_pred EEccccceeEEEeccCCCeeEEeccCCceEEEEEcCCCeeeeeee
Confidence 345 48999999999975 58999999999999998877555444
No 242
>KOG4497|consensus
Probab=92.45 E-value=0.09 Score=39.82 Aligned_cols=28 Identities=29% Similarity=0.604 Sum_probs=25.3
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy11104 15 TKVNCLAWHQNQGWIAVGGDDGLLKVLK 42 (70)
Q Consensus 15 ~~V~~va~spdg~~LasGg~Dg~IklWd 42 (70)
-.+..++|+|.+++||.|+.|+.+|+-+
T Consensus 211 lG~k~v~wsP~~qflavGsyD~~lrvln 238 (447)
T KOG4497|consen 211 LGLKFVEWSPCNQFLAVGSYDQMLRVLN 238 (447)
T ss_pred cceeEEEeccccceEEeeccchhhhhhc
Confidence 4588999999999999999999999865
No 243
>KOG0644|consensus
Probab=92.41 E-value=0.03 Score=46.30 Aligned_cols=54 Identities=17% Similarity=0.190 Sum_probs=40.5
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEecccc-cccccCCC
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQER-NLQDKLPP 66 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~-~~~~~~~~ 66 (70)
+|.+.|..++-+.+..++|++|.|.-||+|.+..+... .+..+++. .+.-+|-|
T Consensus 230 Ghs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~~pv-svLrghtgavtaiafsP 284 (1113)
T KOG0644|consen 230 GHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPDGAPV-SVLRGHTGAVTAIAFSP 284 (1113)
T ss_pred CCccccchhccchhhhhhhhcccCceEEEEecCCCchH-HHHhccccceeeeccCc
Confidence 68899999999999999999999999999998877533 33334442 33334444
No 244
>PRK05137 tolB translocation protein TolB; Provisional
Probab=92.09 E-value=0.42 Score=35.10 Aligned_cols=35 Identities=6% Similarity=-0.015 Sum_probs=25.5
Q ss_pred CCCCeEEEEEcCCCCEEE-EEeCCCc--EEEEECCCCC
Q psy11104 13 NNTKVNCLAWHQNQGWIA-VGGDDGL--LKVLKLDTVS 47 (70)
Q Consensus 13 ~~~~V~~va~spdg~~La-sGg~Dg~--IklWdi~~~~ 47 (70)
+.+.+.+.+|||||+.|+ +.+.||. |.+||++++.
T Consensus 244 ~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~ 281 (435)
T PRK05137 244 FPGMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRSGT 281 (435)
T ss_pred CCCcccCcEECCCCCEEEEEEecCCCceEEEEECCCCc
Confidence 345677889999998765 5666765 6666877664
No 245
>KOG4547|consensus
Probab=92.06 E-value=0.54 Score=37.00 Aligned_cols=43 Identities=16% Similarity=0.183 Sum_probs=35.8
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEec
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILF 55 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~ 55 (70)
+..+..+.+++.+|||..++++| +.|++||+++.+....+..+
T Consensus 141 ~~~~~~~~sl~is~D~~~l~~as--~~ik~~~~~~kevv~~ftgh 183 (541)
T KOG4547|consen 141 KEQKPLVSSLCISPDGKILLTAS--RQIKVLDIETKEVVITFTGH 183 (541)
T ss_pred ccCCCccceEEEcCCCCEEEecc--ceEEEEEccCceEEEEecCC
Confidence 34566788999999999999885 68999999999887776654
No 246
>KOG1517|consensus
Probab=91.74 E-value=0.3 Score=41.51 Aligned_cols=37 Identities=19% Similarity=0.270 Sum_probs=31.6
Q ss_pred eecCCCCC--eEEEEEcCCCC-EEEEEeCCCcEEEEECCC
Q psy11104 9 IAIPNNTK--VNCLAWHQNQG-WIAVGGDDGLLKVLKLDT 45 (70)
Q Consensus 9 I~~~~~~~--V~~va~spdg~-~LasGg~Dg~IklWdi~~ 45 (70)
+.++|+.. |..+.+.++|- .|+||+.||.|++||++.
T Consensus 1249 ~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~ 1288 (1387)
T KOG1517|consen 1249 VYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRM 1288 (1387)
T ss_pred eecccCCcccceeEEeecCCCcceeeeccCCeEEEEeccc
Confidence 34567776 99999999865 499999999999999988
No 247
>KOG2695|consensus
Probab=91.59 E-value=0.22 Score=37.84 Aligned_cols=37 Identities=19% Similarity=0.211 Sum_probs=30.1
Q ss_pred CCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECCCCCe
Q psy11104 12 PNNTKVNCLAWHQ-NQGWIAVGGDDGLLKVLKLDTVSL 48 (70)
Q Consensus 12 ~~~~~V~~va~sp-dg~~LasGg~Dg~IklWdi~~~~~ 48 (70)
-|.+.|.|+..-. +++.|.+.+.+|+|++||++.-++
T Consensus 296 yh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~ 333 (425)
T KOG2695|consen 296 YHDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKC 333 (425)
T ss_pred EcCcchhhhhhhccccceEeeccCcCceeEeeehhhhc
Confidence 4677888887766 678888889999999999987665
No 248
>KOG3914|consensus
Probab=91.42 E-value=0.23 Score=37.64 Aligned_cols=35 Identities=11% Similarity=0.142 Sum_probs=30.6
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTV 46 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~ 46 (70)
+|-+-+..|+|+||+++|+++..|..||+-.+...
T Consensus 149 GhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~ 183 (390)
T KOG3914|consen 149 GHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPAT 183 (390)
T ss_pred hhhhhhheeeecCCCCEEEEecCCceEEEEecCcc
Confidence 46778999999999999999999999999876543
No 249
>KOG2314|consensus
Probab=91.38 E-value=0.37 Score=38.51 Aligned_cols=42 Identities=12% Similarity=0.145 Sum_probs=32.7
Q ss_pred CCCCCeEEEEEcCCCCEEEEEe-----------CCCcEEEEECCCCCeEEEEEe
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGG-----------DDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg-----------~Dg~IklWdi~~~~~~~~~~~ 54 (70)
.|. .|.-++|||+.+||+|=| +...++|||+++|...-++..
T Consensus 248 ~Hp-~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~lkrsF~~ 300 (698)
T KOG2314|consen 248 YHP-GVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIATGLLKRSFPV 300 (698)
T ss_pred cCC-CceeeecCCccceEEEecCCccccCcccCCCceEEEEEccccchhcceec
Confidence 344 489999999999999964 235899999999986655544
No 250
>PRK03629 tolB translocation protein TolB; Provisional
Probab=91.32 E-value=0.86 Score=33.68 Aligned_cols=35 Identities=14% Similarity=0.152 Sum_probs=27.5
Q ss_pred CCCCeEEEEEcCCCCEEEEEe---CCCcEEEEECCCCC
Q psy11104 13 NNTKVNCLAWHQNQGWIAVGG---DDGLLKVLKLDTVS 47 (70)
Q Consensus 13 ~~~~V~~va~spdg~~LasGg---~Dg~IklWdi~~~~ 47 (70)
+...+.+.+|||||+.||..+ .+..|.+|++.+++
T Consensus 197 ~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~ 234 (429)
T PRK03629 197 SPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGA 234 (429)
T ss_pred CCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCC
Confidence 345788999999999988654 34579999998765
No 251
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=91.21 E-value=1.1 Score=33.37 Aligned_cols=37 Identities=24% Similarity=0.156 Sum_probs=30.5
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEE
Q psy11104 14 NTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTI 50 (70)
Q Consensus 14 ~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~ 50 (70)
.+++..++.||+|++||.-.++|.+.+.+.+-.+.-+
T Consensus 216 ~~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~ 252 (410)
T PF04841_consen 216 DGPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLC 252 (410)
T ss_pred CCCeEEEEECCCCCEEEEEECCCCEEEEECcccceeE
Confidence 4679999999999999999999999988765554433
No 252
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=91.15 E-value=0.98 Score=22.31 Aligned_cols=28 Identities=14% Similarity=0.328 Sum_probs=18.6
Q ss_pred CCCeEEEEEcCCCCEEEEEe-CC--CcEEEE
Q psy11104 14 NTKVNCLAWHQNQGWIAVGG-DD--GLLKVL 41 (70)
Q Consensus 14 ~~~V~~va~spdg~~LasGg-~D--g~IklW 41 (70)
...-.+.+|||||+.|+-.+ .+ |.-.||
T Consensus 8 ~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy 38 (39)
T PF07676_consen 8 PGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY 38 (39)
T ss_dssp SSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred CccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence 44667889999998877654 34 555555
No 253
>KOG2066|consensus
Probab=91.14 E-value=0.54 Score=38.62 Aligned_cols=41 Identities=20% Similarity=0.122 Sum_probs=31.0
Q ss_pred CCCCCeEEEEEcCC-------------CCEEEEEeCCCcEEEEECCCCCeEEEE
Q psy11104 12 PNNTKVNCLAWHQN-------------QGWIAVGGDDGLLKVLKLDTVSLTIMI 52 (70)
Q Consensus 12 ~~~~~V~~va~spd-------------g~~LasGg~Dg~IklWdi~~~~~~~~~ 52 (70)
+|++.|.-..+.-+ |+++||||+||+|-|-.+-++++....
T Consensus 56 tH~g~v~~~~~~~~~~~~~~~s~~~~~Gey~asCS~DGkv~I~sl~~~~~~~~~ 109 (846)
T KOG2066|consen 56 THRGAVYLTTCQGNPKTNFDHSSSILEGEYVASCSDDGKVVIGSLFTDDEITQY 109 (846)
T ss_pred cccceEEEEecCCcccccccccccccCCceEEEecCCCcEEEeeccCCccceeE
Confidence 56666665555444 999999999999999988877766543
No 254
>KOG0650|consensus
Probab=91.09 E-value=0.33 Score=39.04 Aligned_cols=60 Identities=15% Similarity=0.163 Sum_probs=45.6
Q ss_pred eeecCCCCCeEEEEEcCCCCEEEEEeCC---CcEEEEECCCCCeEEEEEecccccccccCCCC
Q psy11104 8 KIAIPNNTKVNCLAWHQNQGWIAVGGDD---GLLKVLKLDTVSLTIMIILFQERNLQDKLPPL 67 (70)
Q Consensus 8 ~I~~~~~~~V~~va~spdg~~LasGg~D---g~IklWdi~~~~~~~~~~~~~~~~~~~~~~~~ 67 (70)
.|...|...|+.|.||..|.|||+..-| ..|-|.++......+.+.+-+.....++|-|-
T Consensus 515 ~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~VliHQLSK~~sQ~PF~kskG~vq~v~FHPs 577 (733)
T KOG0650|consen 515 CIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVLIHQLSKRKSQSPFRKSKGLVQRVKFHPS 577 (733)
T ss_pred EEEEecCCccceeeeecCCceEEEeccCCCcceEEEEecccccccCchhhcCCceeEEEecCC
Confidence 3666788999999999999999997544 47889998777766666555556666666664
No 255
>KOG3881|consensus
Probab=91.05 E-value=0.62 Score=35.52 Aligned_cols=56 Identities=9% Similarity=0.020 Sum_probs=45.7
Q ss_pred EEeeeeeecCCCC-----CeEEEEEcCC--CCEEEEEeCCCcEEEEECCCCCeEEEEEecccc
Q psy11104 3 IYLSKKIAIPNNT-----KVNCLAWHQN--QGWIAVGGDDGLLKVLKLDTVSLTIMIILFQER 58 (70)
Q Consensus 3 ~~~~~~I~~~~~~-----~V~~va~spd--g~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~ 58 (70)
+|.+|++.+..-+ .+.++.|-|. ...+|++..-+.+|+||.+.++.++.-..+.|.
T Consensus 186 iw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~ 248 (412)
T KOG3881|consen 186 IWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLEN 248 (412)
T ss_pred eeeccCCCCccccceeeeeeccceecCCCCCceEEEEecceeEEEecCcccCcceeEeccccC
Confidence 6888888875432 4568888877 789999999999999999999988887777664
No 256
>KOG1645|consensus
Probab=91.04 E-value=0.17 Score=38.84 Aligned_cols=46 Identities=13% Similarity=0.197 Sum_probs=38.0
Q ss_pred ecCCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEECCCCCeEEEEEec
Q psy11104 10 AIPNNTKVNCLAWHQNQG-WIAVGGDDGLLKVLKLDTVSLTIMIILF 55 (70)
Q Consensus 10 ~~~~~~~V~~va~spdg~-~LasGg~Dg~IklWdi~~~~~~~~~~~~ 55 (70)
-..|+..|..++|||..+ ++..++.+.+|+|.|+++...+.+..+.
T Consensus 189 lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~ 235 (463)
T KOG1645|consen 189 LPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY 235 (463)
T ss_pred ccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc
Confidence 335678899999999966 8899999999999999988776665554
No 257
>PRK04922 tolB translocation protein TolB; Provisional
Probab=90.91 E-value=0.76 Score=33.76 Aligned_cols=34 Identities=21% Similarity=0.116 Sum_probs=25.6
Q ss_pred CeEEEEEcCCCCEEEEEeCCC---cEEEEECCCCCeE
Q psy11104 16 KVNCLAWHQNQGWIAVGGDDG---LLKVLKLDTVSLT 49 (70)
Q Consensus 16 ~V~~va~spdg~~LasGg~Dg---~IklWdi~~~~~~ 49 (70)
.....+|||||++|+..+.++ .|.+||+.++...
T Consensus 337 ~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~ 373 (433)
T PRK04922 337 YNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVR 373 (433)
T ss_pred CccCEEECCCCCEEEEEECCCCceeEEEEECCCCCeE
Confidence 344689999999988765433 6999999877644
No 258
>KOG4714|consensus
Probab=90.71 E-value=0.09 Score=38.59 Aligned_cols=39 Identities=23% Similarity=0.455 Sum_probs=31.5
Q ss_pred CeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 16 KVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 16 ~V~~va~spd-g~~LasGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
.|.+++=+|. ..++++|++||.+-+||.+...-+.++..
T Consensus 181 ~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ 220 (319)
T KOG4714|consen 181 AVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLK 220 (319)
T ss_pred cchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHH
Confidence 4999999998 56788899999999999988765544443
No 259
>KOG2321|consensus
Probab=90.64 E-value=0.69 Score=37.12 Aligned_cols=37 Identities=19% Similarity=0.328 Sum_probs=32.2
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEE
Q psy11104 15 TKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIM 51 (70)
Q Consensus 15 ~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~ 51 (70)
..|++++|+-||-.+|.|..+|.|.|+|+++.+..+.
T Consensus 229 ~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~ 265 (703)
T KOG2321|consen 229 PSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLV 265 (703)
T ss_pred CcceEEEecCCceeEEeeccCCcEEEEEcccCCceee
Confidence 4599999998899999999999999999988765443
No 260
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=90.54 E-value=0.88 Score=32.42 Aligned_cols=35 Identities=20% Similarity=0.257 Sum_probs=28.0
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCC---cEEEEECCCCCe
Q psy11104 14 NTKVNCLAWHQNQGWIAVGGDDG---LLKVLKLDTVSL 48 (70)
Q Consensus 14 ~~~V~~va~spdg~~LasGg~Dg---~IklWdi~~~~~ 48 (70)
...+...+|+|+|++|+.++.++ .|.+||+.++..
T Consensus 321 ~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~ 358 (417)
T TIGR02800 321 GGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGE 358 (417)
T ss_pred CCCccCeEECCCCCEEEEEEccCCceEEEEEeCCCCCe
Confidence 44567889999999999888776 788889877544
No 261
>PRK01029 tolB translocation protein TolB; Provisional
Probab=90.43 E-value=0.8 Score=34.06 Aligned_cols=36 Identities=22% Similarity=0.163 Sum_probs=27.2
Q ss_pred CCCeEEEEEcCCCCEEEEEeCC---CcEEEEECCCCCeE
Q psy11104 14 NTKVNCLAWHQNQGWIAVGGDD---GLLKVLKLDTVSLT 49 (70)
Q Consensus 14 ~~~V~~va~spdg~~LasGg~D---g~IklWdi~~~~~~ 49 (70)
...+...+|||||+.||..+.+ ..|.+||+.+++..
T Consensus 326 ~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~ 364 (428)
T PRK01029 326 YRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDY 364 (428)
T ss_pred CCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeE
Confidence 3456788999999998876543 36899999877643
No 262
>PRK04792 tolB translocation protein TolB; Provisional
Probab=90.37 E-value=0.73 Score=34.36 Aligned_cols=35 Identities=14% Similarity=0.035 Sum_probs=26.2
Q ss_pred CCCeEEEEEcCCCCEEEEEeC-CC--cEEEEECCCCCe
Q psy11104 14 NTKVNCLAWHQNQGWIAVGGD-DG--LLKVLKLDTVSL 48 (70)
Q Consensus 14 ~~~V~~va~spdg~~LasGg~-Dg--~IklWdi~~~~~ 48 (70)
...+.+.+|||||+.||..+. ++ .|.+||+.+++.
T Consensus 217 ~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~ 254 (448)
T PRK04792 217 PEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVR 254 (448)
T ss_pred CCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCe
Confidence 446678999999999887654 33 588889887653
No 263
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=90.12 E-value=0.47 Score=35.96 Aligned_cols=57 Identities=12% Similarity=0.213 Sum_probs=41.8
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEec-cc-------ccccccCCCCc
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILF-QE-------RNLQDKLPPLM 68 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~-~~-------~~~~~~~~~~~ 68 (70)
+.|.--+++++|+.|.+.+.| ++|=.|.+|++.--.....+-.- +| -.+++.|-|-|
T Consensus 169 NaH~yhiNSiS~NsD~et~lS-aDdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~ 233 (460)
T COG5170 169 NAHPYHINSISFNSDKETLLS-ADDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEM 233 (460)
T ss_pred ccceeEeeeeeecCchheeee-ccceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhH
Confidence 678889999999999999888 57889999998766655554442 11 25566666644
No 264
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=90.09 E-value=1.4 Score=35.50 Aligned_cols=36 Identities=14% Similarity=0.337 Sum_probs=29.8
Q ss_pred CCCCCeEEEEEcCC---CCEEEEEeCCCcEEEEECCCCC
Q psy11104 12 PNNTKVNCLAWHQN---QGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 12 ~~~~~V~~va~spd---g~~LasGg~Dg~IklWdi~~~~ 47 (70)
++...|..+.|||. +.+|+.=..|+++|++|+....
T Consensus 144 ~~~~~i~qv~WhP~s~~~~~l~vLtsdn~lR~y~~~~~~ 182 (717)
T PF10168_consen 144 NSSLEIKQVRWHPWSESDSHLVVLTSDNTLRLYDISDPQ 182 (717)
T ss_pred CCCceEEEEEEcCCCCCCCeEEEEecCCEEEEEecCCCC
Confidence 34568999999997 4788888999999999987654
No 265
>PRK02889 tolB translocation protein TolB; Provisional
Probab=89.96 E-value=0.99 Score=33.21 Aligned_cols=32 Identities=19% Similarity=0.035 Sum_probs=25.3
Q ss_pred eEEEEEcCCCCEEEEEeCCC---cEEEEECCCCCe
Q psy11104 17 VNCLAWHQNQGWIAVGGDDG---LLKVLKLDTVSL 48 (70)
Q Consensus 17 V~~va~spdg~~LasGg~Dg---~IklWdi~~~~~ 48 (70)
....+|||||++||..+.++ .|.+||+.++..
T Consensus 330 ~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~ 364 (427)
T PRK02889 330 NTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQV 364 (427)
T ss_pred cCceEECCCCCEEEEEEccCCcEEEEEEECCCCCe
Confidence 34578999999998877655 699999987754
No 266
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=89.44 E-value=1.8 Score=31.77 Aligned_cols=38 Identities=13% Similarity=0.184 Sum_probs=26.7
Q ss_pred CCCeEEEEEcCCCCEEEEE-eCCCcEEEEECCCCCeEEE
Q psy11104 14 NTKVNCLAWHQNQGWIAVG-GDDGLLKVLKLDTVSLTIM 51 (70)
Q Consensus 14 ~~~V~~va~spdg~~LasG-g~Dg~IklWdi~~~~~~~~ 51 (70)
.....++++||||++++.+ ..++.+.++|.++.+..-.
T Consensus 77 G~~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~ 115 (369)
T PF02239_consen 77 GGNPRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKT 115 (369)
T ss_dssp SSEEEEEEE--TTTEEEEEEEETTEEEEEETTT--EEEE
T ss_pred CCCcceEEEcCCCCEEEEEecCCCceeEeccccccceee
Confidence 4456899999999987765 5799999999888764433
No 267
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=89.35 E-value=0.75 Score=31.63 Aligned_cols=30 Identities=20% Similarity=0.205 Sum_probs=25.6
Q ss_pred EcCCCCEEEEEeCCCcEEEEECCCCCeEEE
Q psy11104 22 WHQNQGWIAVGGDDGLLKVLKLDTVSLTIM 51 (70)
Q Consensus 22 ~spdg~~LasGg~Dg~IklWdi~~~~~~~~ 51 (70)
+..++.+|.+-..+|.+++||+.+.+..+.
T Consensus 18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~ 47 (219)
T PF07569_consen 18 LECNGSYLLAITSSGLLYVWNLKKGKAVLP 47 (219)
T ss_pred EEeCCCEEEEEeCCCeEEEEECCCCeeccC
Confidence 556789999999999999999999876654
No 268
>PRK03629 tolB translocation protein TolB; Provisional
Probab=89.19 E-value=1.3 Score=32.80 Aligned_cols=30 Identities=13% Similarity=0.178 Sum_probs=23.0
Q ss_pred eEEEEEcCCCCEEEEEeCCCc---EEEEECCCC
Q psy11104 17 VNCLAWHQNQGWIAVGGDDGL---LKVLKLDTV 46 (70)
Q Consensus 17 V~~va~spdg~~LasGg~Dg~---IklWdi~~~ 46 (70)
....+|+|||++|+..+.|+. +.++++...
T Consensus 376 ~~~p~~SpDG~~i~~~s~~~~~~~l~~~~~~G~ 408 (429)
T PRK03629 376 DETPSIAPNGTMVIYSSSQGMGSVLNLVSTDGR 408 (429)
T ss_pred CCCceECCCCCEEEEEEcCCCceEEEEEECCCC
Confidence 346789999999999998875 666776443
No 269
>KOG3621|consensus
Probab=89.01 E-value=0.64 Score=37.66 Aligned_cols=34 Identities=24% Similarity=0.477 Sum_probs=31.1
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDT 45 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~ 45 (70)
.|+..|+|++|++|+..+.+|..-|+|.+-.+.+
T Consensus 122 ~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 122 SHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS 155 (726)
T ss_pred cCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence 4788999999999999999999999999888776
No 270
>PRK00178 tolB translocation protein TolB; Provisional
Probab=88.97 E-value=1.2 Score=32.42 Aligned_cols=34 Identities=26% Similarity=0.353 Sum_probs=24.7
Q ss_pred CCeEEEEEcCCCCEEE-EEeCCC--cEEEEECCCCCe
Q psy11104 15 TKVNCLAWHQNQGWIA-VGGDDG--LLKVLKLDTVSL 48 (70)
Q Consensus 15 ~~V~~va~spdg~~La-sGg~Dg--~IklWdi~~~~~ 48 (70)
+.+.+.+|+|||+.|+ +.+.+| .|.++|++++..
T Consensus 243 g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~~ 279 (430)
T PRK00178 243 GLNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLASRQL 279 (430)
T ss_pred CCcCCeEECCCCCEEEEEEccCCCceEEEEECCCCCe
Confidence 3455789999999877 455555 577889887653
No 271
>KOG1354|consensus
Probab=88.92 E-value=0.72 Score=35.12 Aligned_cols=44 Identities=14% Similarity=0.218 Sum_probs=36.3
Q ss_pred ecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 10 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 10 ~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
.++|.--|++|++|.|++.+.| ++|=.|.+|+++-..+...+-.
T Consensus 160 aNaHtyhiNSIS~NsD~Et~lS-ADdLRINLWnlei~d~sFnIVD 203 (433)
T KOG1354|consen 160 ANAHTYHINSISVNSDKETFLS-ADDLRINLWNLEIIDQSFNIVD 203 (433)
T ss_pred cccceeEeeeeeecCccceEee-ccceeeeeccccccCCceeEEE
Confidence 4578889999999999999998 5788999999877666666554
No 272
>KOG1240|consensus
Probab=88.91 E-value=1.7 Score=37.56 Aligned_cols=43 Identities=23% Similarity=0.387 Sum_probs=35.9
Q ss_pred EEeeeeeecC------------CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy11104 3 IYLSKKIAIP------------NNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDT 45 (70)
Q Consensus 3 ~~~~~~I~~~------------~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~ 45 (70)
+|..+++... .++++.++..-++|..+|.|+.||.|++.+++-
T Consensus 1075 vW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~t~DG~v~~~~id~ 1129 (1431)
T KOG1240|consen 1075 VWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAVSTKDGSVRVLRIDH 1129 (1431)
T ss_pred EeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEEEcCCCeEEEEEccc
Confidence 5666666554 567899999999999999999999999999865
No 273
>KOG4497|consensus
Probab=88.86 E-value=1.1 Score=34.21 Aligned_cols=36 Identities=14% Similarity=0.202 Sum_probs=28.7
Q ss_pred CCCeEEEEEcCCCCE-EEEEeCCCcEEEEECCCCCeE
Q psy11104 14 NTKVNCLAWHQNQGW-IAVGGDDGLLKVLKLDTVSLT 49 (70)
Q Consensus 14 ~~~V~~va~spdg~~-LasGg~Dg~IklWdi~~~~~~ 49 (70)
...+.+++|||||+. |.+..-|-.|-+|.+.+.+..
T Consensus 91 ~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~ 127 (447)
T KOG4497|consen 91 QAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGY 127 (447)
T ss_pred CCcceeeeECCCcceEeeeecceeEEEEEEeccceeE
Confidence 456889999999955 666777889999998877543
No 274
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=88.81 E-value=0.54 Score=35.65 Aligned_cols=38 Identities=16% Similarity=0.228 Sum_probs=30.3
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEE
Q psy11104 15 TKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMII 53 (70)
Q Consensus 15 ~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~ 53 (70)
+.|..+.|+++|++|++- +--+++|||+...+.++-.+
T Consensus 281 sSISD~kFs~ngryIlsR-dyltvkiwDvnm~k~pikTi 318 (460)
T COG5170 281 SSISDFKFSDNGRYILSR-DYLTVKIWDVNMAKNPIKTI 318 (460)
T ss_pred hhhcceEEcCCCcEEEEe-ccceEEEEecccccCCceee
Confidence 467889999999999974 35689999998887665443
No 275
>KOG3617|consensus
Probab=88.74 E-value=0.78 Score=38.71 Aligned_cols=37 Identities=11% Similarity=0.307 Sum_probs=33.4
Q ss_pred eeecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy11104 8 KIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLD 44 (70)
Q Consensus 8 ~I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~ 44 (70)
++..+|..+|..+.|||+|..+.|+..=|.+.+|.+.
T Consensus 95 tv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 95 TVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred eeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence 3555899999999999999999999999999999875
No 276
>KOG1538|consensus
Probab=87.52 E-value=1.2 Score=36.81 Aligned_cols=41 Identities=15% Similarity=0.408 Sum_probs=32.9
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 13 NNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 13 ~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
....|.|.+|+-||+++|-|-.||+|.|=+ +++++.+.+..
T Consensus 131 ss~R~~~CsWtnDGqylalG~~nGTIsiRN-k~gEek~~I~R 171 (1081)
T KOG1538|consen 131 SSSRIICCSWTNDGQYLALGMFNGTISIRN-KNGEEKVKIER 171 (1081)
T ss_pred hheeEEEeeecCCCcEEEEeccCceEEeec-CCCCcceEEeC
Confidence 356789999999999999999999999865 55555555554
No 277
>KOG2066|consensus
Probab=87.27 E-value=1.4 Score=36.31 Aligned_cols=38 Identities=26% Similarity=0.397 Sum_probs=30.6
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEE
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMI 52 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~ 52 (70)
.-.++|.+|.| .|.+||=++++| |+++|+.++.....+
T Consensus 158 ~~eG~I~~i~W--~g~lIAWand~G-v~vyd~~~~~~l~~i 195 (846)
T KOG2066|consen 158 EGEGPIHSIKW--RGNLIAWANDDG-VKVYDTPTRQRLTNI 195 (846)
T ss_pred cCccceEEEEe--cCcEEEEecCCC-cEEEeccccceeecc
Confidence 34689999999 589999998888 899998877655443
No 278
>KOG2695|consensus
Probab=86.58 E-value=0.83 Score=34.78 Aligned_cols=38 Identities=26% Similarity=0.318 Sum_probs=27.5
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCCCeEEEEEeccccccc
Q psy11104 23 HQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQERNLQ 61 (70)
Q Consensus 23 spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~~~~ 61 (70)
++....++++|+|...|||.++++...+++ .|++-...
T Consensus 355 ~~eeg~I~s~GdDcytRiWsl~~ghLl~ti-pf~~s~~e 392 (425)
T KOG2695|consen 355 KEEEGSIFSVGDDCYTRIWSLDSGHLLCTI-PFPYSASE 392 (425)
T ss_pred ccccceEEEccCeeEEEEEecccCceeecc-CCCCcccc
Confidence 344568888999999999999999876652 34443333
No 279
>KOG1409|consensus
Probab=86.18 E-value=0.76 Score=34.86 Aligned_cols=31 Identities=16% Similarity=0.451 Sum_probs=26.0
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy11104 15 TKVNCLAWHQNQGWIAVGGDDGLLKVLKLDT 45 (70)
Q Consensus 15 ~~V~~va~spdg~~LasGg~Dg~IklWdi~~ 45 (70)
..|.++.+.-.-.+|+|+|.|..|+|||+++
T Consensus 365 tgItamhlqetlglLvTsG~~Rvi~iwd~~~ 395 (404)
T KOG1409|consen 365 TGITAMHLQETLGLLVTSGTDRVIKIWDVRS 395 (404)
T ss_pred cceeEEEhhhhccceeecCCceEEEEEechh
Confidence 3577888876777899999999999999764
No 280
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=86.12 E-value=1.7 Score=27.65 Aligned_cols=27 Identities=30% Similarity=0.364 Sum_probs=20.3
Q ss_pred eEEEEEcC---CC-CEEEEEeCCCcEEEEEC
Q psy11104 17 VNCLAWHQ---NQ-GWIAVGGDDGLLKVLKL 43 (70)
Q Consensus 17 V~~va~sp---dg-~~LasGg~Dg~IklWdi 43 (70)
|+++++.. || ..|+.||+|..||+|+-
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~ 32 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKG 32 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeC
Confidence 55666654 43 56999999999999973
No 281
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=86.05 E-value=1.7 Score=36.27 Aligned_cols=33 Identities=18% Similarity=0.245 Sum_probs=29.6
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCe
Q psy11104 16 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSL 48 (70)
Q Consensus 16 ~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~ 48 (70)
....|+++++|+++++-+.++.|++||+++++.
T Consensus 860 ~P~GIavd~dG~lyVaDt~Nn~Irvid~~~~~~ 892 (1057)
T PLN02919 860 EPAGLALGENGRLFVADTNNSLIRYLDLNKGEA 892 (1057)
T ss_pred CceEEEEeCCCCEEEEECCCCEEEEEECCCCcc
Confidence 567899999999999999999999999988764
No 282
>KOG0649|consensus
Probab=85.97 E-value=1.9 Score=31.69 Aligned_cols=40 Identities=15% Similarity=0.218 Sum_probs=32.3
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 15 TKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 15 ~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
..|+++...|..+-|..+|.|+.++-||+++++..-.+..
T Consensus 115 PeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~rG 154 (325)
T KOG0649|consen 115 PEINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREYRG 154 (325)
T ss_pred CccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEEcC
Confidence 3689999999877777777899999999999976555443
No 283
>KOG1354|consensus
Probab=85.92 E-value=1.2 Score=34.04 Aligned_cols=32 Identities=9% Similarity=0.318 Sum_probs=28.3
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLK 42 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWd 42 (70)
.....-|.+|.|+..|++||+|..+|.|-++.
T Consensus 22 vteadiis~vef~~~Ge~LatGdkgGRVv~f~ 53 (433)
T KOG1354|consen 22 VTEADIISAVEFDHYGERLATGDKGGRVVLFE 53 (433)
T ss_pred echhcceeeEEeecccceEeecCCCCeEEEee
Confidence 34567789999999999999999999999986
No 284
>KOG4190|consensus
Probab=85.10 E-value=0.36 Score=39.01 Aligned_cols=34 Identities=15% Similarity=0.224 Sum_probs=29.0
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDT 45 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~ 45 (70)
+|...|+.++--.|.+-++|++.|++||+|.++.
T Consensus 733 GH~~~iRai~AidNENSFiSASkDKTVKLWSik~ 766 (1034)
T KOG4190|consen 733 GHQEKIRAIAAIDNENSFISASKDKTVKLWSIKP 766 (1034)
T ss_pred CcHHHhHHHHhcccccceeeccCCceEEEEEecc
Confidence 6778888887767788899999999999999864
No 285
>KOG1517|consensus
Probab=85.08 E-value=2.1 Score=36.71 Aligned_cols=40 Identities=25% Similarity=0.207 Sum_probs=30.2
Q ss_pred eecCCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCCe
Q psy11104 9 IAIPNNTKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTVSL 48 (70)
Q Consensus 9 I~~~~~~~V~~va~spd-g~~LasGg~Dg~IklWdi~~~~~ 48 (70)
|.......|++++=+.. |+.||.|-.||.||++|.+....
T Consensus 1203 iP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ 1243 (1387)
T KOG1517|consen 1203 IPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPP 1243 (1387)
T ss_pred cccCCCccceeecccccCCceEEEeecCCceEEeecccCCc
Confidence 33444566777766655 79999999999999999766543
No 286
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=84.87 E-value=6.5 Score=29.19 Aligned_cols=39 Identities=10% Similarity=0.109 Sum_probs=31.6
Q ss_pred CCCeEEEEEcCCCC-EEEEEe-CCCcEEEEECCCCCeEEEE
Q psy11104 14 NTKVNCLAWHQNQG-WIAVGG-DDGLLKVLKLDTVSLTIMI 52 (70)
Q Consensus 14 ~~~V~~va~spdg~-~LasGg-~Dg~IklWdi~~~~~~~~~ 52 (70)
...+..|+++|||+ +|.... .++.|.+.|..+.+..-++
T Consensus 298 G~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~k~i~~i 338 (352)
T TIGR02658 298 GHEIDSINVSQDAKPLLYALSTGDKTLYIFDAETGKELSSV 338 (352)
T ss_pred CCceeeEEECCCCCeEEEEeCCCCCcEEEEECcCCeEEeee
Confidence 45789999999998 766444 7889999999998876654
No 287
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=84.56 E-value=2.1 Score=35.35 Aligned_cols=29 Identities=14% Similarity=0.402 Sum_probs=25.0
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy11104 14 NTKVNCLAWHQNQGWIAVGGDDGLLKVLK 42 (70)
Q Consensus 14 ~~~V~~va~spdg~~LasGg~Dg~IklWd 42 (70)
.+.|.|++||||+++||-...+|++-+-+
T Consensus 120 d~GI~a~~WSPD~Ella~vT~~~~l~~mt 148 (928)
T PF04762_consen 120 DSGILAASWSPDEELLALVTGEGNLLLMT 148 (928)
T ss_pred cCcEEEEEECCCcCEEEEEeCCCEEEEEe
Confidence 35799999999999999998899887764
No 288
>PRK04792 tolB translocation protein TolB; Provisional
Probab=84.41 E-value=2.8 Score=31.25 Aligned_cols=32 Identities=16% Similarity=0.184 Sum_probs=23.2
Q ss_pred CeEEEEEcCCCCEEEE-EeCCCc--EEEEECCCCC
Q psy11104 16 KVNCLAWHQNQGWIAV-GGDDGL--LKVLKLDTVS 47 (70)
Q Consensus 16 ~V~~va~spdg~~Las-Gg~Dg~--IklWdi~~~~ 47 (70)
.....+|+|||+.||. .+.||. |.++|+++++
T Consensus 263 ~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~ 297 (448)
T PRK04792 263 INGAPRFSPDGKKLALVLSKDGQPEIYVVDIATKA 297 (448)
T ss_pred CcCCeeECCCCCEEEEEEeCCCCeEEEEEECCCCC
Confidence 3457899999998764 566775 6677877664
No 289
>KOG0309|consensus
Probab=82.31 E-value=1.5 Score=36.40 Aligned_cols=44 Identities=5% Similarity=0.043 Sum_probs=38.9
Q ss_pred CCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCCeEEEEEec
Q psy11104 12 PNNTKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTVSLTIMIILF 55 (70)
Q Consensus 12 ~~~~~V~~va~spd-g~~LasGg~Dg~IklWdi~~~~~~~~~~~~ 55 (70)
+|+..|..+-|+|+ -..+|+++-|-.+..||.++...++-....
T Consensus 112 ghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~ 156 (1081)
T KOG0309|consen 112 GHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSS 156 (1081)
T ss_pred cCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeec
Confidence 78899999999998 678999999999999999998877766553
No 290
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=81.74 E-value=3.5 Score=34.12 Aligned_cols=37 Identities=24% Similarity=0.343 Sum_probs=30.6
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeE
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLT 49 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~ 49 (70)
+....|..++||+|++.||.--+|. |.+|...+-.+-
T Consensus 302 ~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~NYHWY 338 (928)
T PF04762_consen 302 PEEEKVIELAWNSDSEILAVWLEDR-VQLWTRSNYHWY 338 (928)
T ss_pred CCCceeeEEEECCCCCEEEEEecCC-ceEEEeeCCEEE
Confidence 3456899999999999999987666 999988777643
No 291
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=81.45 E-value=4.8 Score=29.58 Aligned_cols=37 Identities=19% Similarity=0.134 Sum_probs=29.8
Q ss_pred CCCeEEEEEcCCCCEE-EEEeCCCcEEEEECCCCCeEE
Q psy11104 14 NTKVNCLAWHQNQGWI-AVGGDDGLLKVLKLDTVSLTI 50 (70)
Q Consensus 14 ~~~V~~va~spdg~~L-asGg~Dg~IklWdi~~~~~~~ 50 (70)
++.+-+|+++++|.++ +|+=..|.+-+||..++...-
T Consensus 216 ~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~tg~~~~ 253 (305)
T PF07433_consen 216 NGYIGSIAADRDGRLIAVTSPRGGRVAVWDAATGRLLG 253 (305)
T ss_pred CCceEEEEEeCCCCEEEEECCCCCEEEEEECCCCCEee
Confidence 4679999999998766 566678899999988887443
No 292
>KOG1832|consensus
Probab=81.42 E-value=3 Score=35.59 Aligned_cols=40 Identities=20% Similarity=0.431 Sum_probs=34.9
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEE
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIM 51 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~ 51 (70)
.|+..-+|++|+-..++|+.|+..|.|+++++.++...-.
T Consensus 1099 d~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s 1138 (1516)
T KOG1832|consen 1099 DETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEES 1138 (1516)
T ss_pred ccccceeeEEeecCCceEEeeeccceEEEEEccCcccccc
Confidence 5677889999999999999999999999999988764443
No 293
>PRK01029 tolB translocation protein TolB; Provisional
Probab=81.42 E-value=5 Score=29.85 Aligned_cols=29 Identities=7% Similarity=0.123 Sum_probs=20.9
Q ss_pred CCeEEEEEcCCCCEEEEEe-CCCcEEEEEC
Q psy11104 15 TKVNCLAWHQNQGWIAVGG-DDGLLKVLKL 43 (70)
Q Consensus 15 ~~V~~va~spdg~~LasGg-~Dg~IklWdi 43 (70)
+.....+|+|||+.|+..+ .+|..+||.+
T Consensus 281 ~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~ 310 (428)
T PRK01029 281 GTQGNPSFSPDGTRLVFVSNKDGRPRIYIM 310 (428)
T ss_pred CCcCCeEECCCCCEEEEEECCCCCceEEEE
Confidence 3446789999999888766 4676666653
No 294
>KOG2315|consensus
Probab=80.75 E-value=2.5 Score=33.55 Aligned_cols=40 Identities=15% Similarity=0.129 Sum_probs=31.4
Q ss_pred CCeEEEEEcCCCCEEEEEeCC---CcEEEEECCCCCeEEEEEe
Q psy11104 15 TKVNCLAWHQNQGWIAVGGDD---GLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 15 ~~V~~va~spdg~~LasGg~D---g~IklWdi~~~~~~~~~~~ 54 (70)
++=+++=|||.|++|+-+|-+ |.|.+||+.+.++...+.+
T Consensus 312 gpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a 354 (566)
T KOG2315|consen 312 GPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKLIAKFKA 354 (566)
T ss_pred CCccceEECCCCCEEEEeecCCCCCceEEEeccchhhcccccc
Confidence 456899999999998888765 6899999988766555433
No 295
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=80.63 E-value=6.9 Score=27.90 Aligned_cols=36 Identities=22% Similarity=0.340 Sum_probs=26.0
Q ss_pred CCCeEEEEEcCCCCEEEEEe-CCCcEEEEECC--CCCeE
Q psy11104 14 NTKVNCLAWHQNQGWIAVGG-DDGLLKVLKLD--TVSLT 49 (70)
Q Consensus 14 ~~~V~~va~spdg~~LasGg-~Dg~IklWdi~--~~~~~ 49 (70)
....+.++++|+|++|+.+. .++.|.+++++ ++...
T Consensus 291 G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d~~tG~l~ 329 (345)
T PF10282_consen 291 GKFPRHFAFSPDGRYLYVANQDSNTVSVFDIDPDTGKLT 329 (345)
T ss_dssp SSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEE
T ss_pred CCCccEEEEeCCCCEEEEEecCCCeEEEEEEeCCCCcEE
Confidence 34478999999999887765 66799999774 44433
No 296
>KOG0309|consensus
Probab=80.27 E-value=0.59 Score=38.71 Aligned_cols=36 Identities=17% Similarity=0.258 Sum_probs=29.2
Q ss_pred CCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCC
Q psy11104 12 PNNTKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 12 ~~~~~V~~va~spd-g~~LasGg~Dg~IklWdi~~~~ 47 (70)
.|-..|+.++|+.- -..+-+++.||+|+.||.....
T Consensus 199 ~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt 235 (1081)
T KOG0309|consen 199 GHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKST 235 (1081)
T ss_pred ccceeeehHHHhhhhhhhhcccCCCCceeeecccccc
Confidence 37778999999876 5568889999999999986543
No 297
>KOG1983|consensus
Probab=79.76 E-value=2.6 Score=35.16 Aligned_cols=43 Identities=7% Similarity=-0.152 Sum_probs=30.5
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEeccccccccc
Q psy11104 20 LAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQERNLQDK 63 (70)
Q Consensus 20 va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~~~~~~ 63 (70)
..+++++..++++..||++..||...++. .......+..+...
T Consensus 240 ~~~~~~~~~~v~~h~Dgs~~fWd~s~g~~-~~~~~~~~~~~~~~ 282 (993)
T KOG1983|consen 240 QLESRDGSHFVSYHTDGSYAFWDVSSGKL-QIARNPVPLVSLVP 282 (993)
T ss_pred ccCccCCceEEEEEecCCEEeeecCCCce-eecCccccccccCC
Confidence 33477899999999999999999998876 43333333333333
No 298
>KOG2041|consensus
Probab=79.76 E-value=4 Score=34.09 Aligned_cols=36 Identities=25% Similarity=0.357 Sum_probs=28.8
Q ss_pred eecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy11104 9 IAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLD 44 (70)
Q Consensus 9 I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~ 44 (70)
|.+-+++-|.+++|+.||..|+...+||-|.+=.++
T Consensus 110 iNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvd 145 (1189)
T KOG2041|consen 110 INNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVD 145 (1189)
T ss_pred hhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeec
Confidence 344567889999999999999999999988654443
No 299
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=79.63 E-value=12 Score=28.02 Aligned_cols=40 Identities=23% Similarity=0.327 Sum_probs=30.4
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEE
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIM 51 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~ 51 (70)
....++|.+++-| |=.++|.|++||.+-|-|++....-..
T Consensus 83 ~~~~g~vtal~~S-~iGFvaigy~~G~l~viD~RGPavI~~ 122 (395)
T PF08596_consen 83 DAKQGPVTALKNS-DIGFVAIGYESGSLVVIDLRGPAVIYN 122 (395)
T ss_dssp ---S-SEEEEEE--BTSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred eccCCcEeEEecC-CCcEEEEEecCCcEEEEECCCCeEEee
Confidence 3347899999996 777999999999999999977765554
No 300
>KOG2139|consensus
Probab=79.30 E-value=1.2 Score=34.12 Aligned_cols=54 Identities=19% Similarity=0.235 Sum_probs=38.9
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEe-cccccccccCCCCc
Q psy11104 14 NTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIIL-FQERNLQDKLPPLM 68 (70)
Q Consensus 14 ~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~-~~~~~~~~~~~~~~ 68 (70)
...+..++||+.-.-+|.+..|-.||++|-++ ++++.+.- -|....+-++-||+
T Consensus 98 ~~dlr~~aWhqH~~~fava~nddvVriy~kss-t~pt~Lks~sQrnvtclawRPls 152 (445)
T KOG2139|consen 98 EIDLRGVAWHQHIIAFAVATNDDVVRIYDKSS-TCPTKLKSVSQRNVTCLAWRPLS 152 (445)
T ss_pred hcceeeEeechhhhhhhhhccCcEEEEeccCC-CCCceecchhhcceeEEEeccCC
Confidence 35789999999877799999999999999666 44443332 23345566677765
No 301
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=78.31 E-value=5.9 Score=33.14 Aligned_cols=33 Identities=12% Similarity=-0.009 Sum_probs=28.6
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeE
Q psy11104 17 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLT 49 (70)
Q Consensus 17 V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~ 49 (70)
..+++++|+|.++++-+.++.|++||.+++...
T Consensus 806 P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~ 838 (1057)
T PLN02919 806 PLGVLCAKDGQIYVADSYNHKIKKLDPATKRVT 838 (1057)
T ss_pred CceeeEeCCCcEEEEECCCCEEEEEECCCCeEE
Confidence 368999999999999999999999998876543
No 302
>KOG4547|consensus
Probab=78.03 E-value=5.6 Score=31.51 Aligned_cols=39 Identities=18% Similarity=0.009 Sum_probs=34.5
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeE
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLT 49 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~ 49 (70)
-.|-+.|+++.++.+...|-|+|.|+.+..|+.++...-
T Consensus 99 ~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~ 137 (541)
T KOG4547|consen 99 DKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVII 137 (541)
T ss_pred CCCCCcceeeecccccCceEecCCceeEEEEecccceee
Confidence 468899999999999999999999999999998776543
No 303
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=77.59 E-value=4.2 Score=32.18 Aligned_cols=38 Identities=11% Similarity=0.188 Sum_probs=31.0
Q ss_pred CCeEEEEEcCCCCEEEEEeCCC---------------cEEEEECCCCCeEEEE
Q psy11104 15 TKVNCLAWHQNQGWIAVGGDDG---------------LLKVLKLDTVSLTIMI 52 (70)
Q Consensus 15 ~~V~~va~spdg~~LasGg~Dg---------------~IklWdi~~~~~~~~~ 52 (70)
..|.-++|||++++|.|=+..+ .+.+||+.++..+...
T Consensus 72 ~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp~~~~n~~~vwd~~sg~iv~sf 124 (561)
T COG5354 72 PDVKYLDFSPNEKYLVTWSREPIIEPEIEISPFTSKNNVFVWDIASGMIVFSF 124 (561)
T ss_pred CCceecccCcccceeeeeccCCccChhhccCCccccCceeEEeccCceeEeec
Confidence 4689999999999999975444 4999999999876653
No 304
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=77.25 E-value=14 Score=23.38 Aligned_cols=43 Identities=14% Similarity=0.277 Sum_probs=30.8
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcE-------EEEECCCCCeEEEEEec
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLL-------KVLKLDTVSLTIMIILF 55 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~I-------klWdi~~~~~~~~~~~~ 55 (70)
...+.|.+++-... ..+|-|-++|+| |+|.+++..++..+..+
T Consensus 40 ~e~~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~~~RlWRiKSK~~~~~~~~~ 89 (111)
T PF14783_consen 40 TETDKVTSLCSLGG-GRFAYALANGTVGVYDRSQRLWRIKSKNQVTSMAFY 89 (111)
T ss_pred ecccceEEEEEcCC-CEEEEEecCCEEEEEeCcceeeeeccCCCeEEEEEE
Confidence 34677888777665 557777666665 77888888888877765
No 305
>KOG1275|consensus
Probab=76.69 E-value=5.1 Score=33.92 Aligned_cols=35 Identities=20% Similarity=0.401 Sum_probs=31.2
Q ss_pred eeecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy11104 8 KIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLK 42 (70)
Q Consensus 8 ~I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWd 42 (70)
.+.++.++.+.+.++|++|+.+|-|..+|.|.+|.
T Consensus 306 ~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa 340 (1118)
T KOG1275|consen 306 KMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWA 340 (1118)
T ss_pred eEEccCCCcceeEEecCCCceEEEecccCcEeeec
Confidence 34556677799999999999999999999999997
No 306
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=76.34 E-value=13 Score=29.76 Aligned_cols=41 Identities=17% Similarity=0.179 Sum_probs=33.3
Q ss_pred eeeecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCe
Q psy11104 7 KKIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSL 48 (70)
Q Consensus 7 ~~I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~ 48 (70)
|.|+.+ -+.|.++.-+|||++++.+.+...|-+.|+++++.
T Consensus 395 kr~e~~-lg~I~av~vs~dGK~~vvaNdr~el~vididngnv 435 (668)
T COG4946 395 KRIEKD-LGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNV 435 (668)
T ss_pred EEeeCC-ccceEEEEEcCCCcEEEEEcCceEEEEEEecCCCe
Confidence 344443 67899999999999999998888888889988863
No 307
>KOG0882|consensus
Probab=75.33 E-value=2.4 Score=33.36 Aligned_cols=36 Identities=14% Similarity=0.158 Sum_probs=31.8
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeE
Q psy11104 14 NTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLT 49 (70)
Q Consensus 14 ~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~ 49 (70)
.....+++|+|+|..+++=++|..||+++.++++..
T Consensus 201 Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGklv 236 (558)
T KOG0882|consen 201 KTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLV 236 (558)
T ss_pred ccCccceEEccccCcccccCcccEEEEEEeccchhh
Confidence 345679999999999999999999999999998744
No 308
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=75.09 E-value=16 Score=26.35 Aligned_cols=34 Identities=21% Similarity=0.301 Sum_probs=25.2
Q ss_pred eEEEEEcCCCCEEEEE-eCCC----cEEEEECCCCCeEE
Q psy11104 17 VNCLAWHQNQGWIAVG-GDDG----LLKVLKLDTVSLTI 50 (70)
Q Consensus 17 V~~va~spdg~~LasG-g~Dg----~IklWdi~~~~~~~ 50 (70)
+...++||||+++|-+ +..| .+++.|+++++..-
T Consensus 126 ~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~ 164 (414)
T PF02897_consen 126 LGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLP 164 (414)
T ss_dssp EEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEE
T ss_pred eeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcC
Confidence 3467899999998855 3333 59999999986443
No 309
>TIGR02608 delta_60_rpt delta-60 repeat domain. This domain occurs in tandem repeats, as many as 13, in proteins from Bdellovibrio bacteriovorus, Azotobacter vinelandii, Geobacter sulfurreducens, Pirellula sp. 1, Myxococcus xanthus, and others, many of which are Deltaproteobacteria. The periodicity of the repeat ranges from about 57 to 61 amino acids, and a core region of about 54 is represented by this model and seed alignment.
Probab=74.81 E-value=12 Score=20.75 Aligned_cols=19 Identities=11% Similarity=0.106 Sum_probs=16.3
Q ss_pred CeEEEEEcCCCCEEEEEeC
Q psy11104 16 KVNCLAWHQNQGWIAVGGD 34 (70)
Q Consensus 16 ~V~~va~spdg~~LasGg~ 34 (70)
.+++++.-|||++|+.|..
T Consensus 2 ~~~~~~~q~DGkIlv~G~~ 20 (55)
T TIGR02608 2 RAYAVAVQSDGKILVAGYV 20 (55)
T ss_pred ceEEEEECCCCcEEEEEEe
Confidence 4688999999999999964
No 310
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=74.66 E-value=19 Score=26.73 Aligned_cols=35 Identities=14% Similarity=0.065 Sum_probs=26.7
Q ss_pred EEEEcCCCCEEEEE-e---------CCCcEEEEECCCCCeEEEEEe
Q psy11104 19 CLAWHQNQGWIAVG-G---------DDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 19 ~va~spdg~~LasG-g---------~Dg~IklWdi~~~~~~~~~~~ 54 (70)
.+ +||||+.|..+ + ++..|.+||.++.+..-.+..
T Consensus 51 ~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~ 95 (352)
T TIGR02658 51 PV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIEL 95 (352)
T ss_pred ee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEcc
Confidence 34 99998876555 4 588999999999987755543
No 311
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=74.40 E-value=7.7 Score=18.21 Aligned_cols=24 Identities=8% Similarity=0.069 Sum_probs=17.8
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEE
Q psy11104 17 VNCLAWHQNQGWIAVGGDDGLLKV 40 (70)
Q Consensus 17 V~~va~spdg~~LasGg~Dg~Ikl 40 (70)
..+|+.+++|+++++=+....|++
T Consensus 4 P~gvav~~~g~i~VaD~~n~rV~v 27 (28)
T PF01436_consen 4 PHGVAVDSDGNIYVADSGNHRVQV 27 (28)
T ss_dssp EEEEEEETTSEEEEEECCCTEEEE
T ss_pred CcEEEEeCCCCEEEEECCCCEEEE
Confidence 467888888888887776666665
No 312
>PF12341 DUF3639: Protein of unknown function (DUF3639) ; InterPro: IPR022100 This domain family is found in eukaryotes, and is approximately 30 amino acids in length. The family is found in association with PF00400 from PFAM. There are two completely conserved residues (E and R) that may be functionally important.
Probab=72.96 E-value=9.3 Score=18.52 Aligned_cols=25 Identities=24% Similarity=0.646 Sum_probs=20.1
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy11104 16 KVNCLAWHQNQGWIAVGGDDGLLKVLK 42 (70)
Q Consensus 16 ~V~~va~spdg~~LasGg~Dg~IklWd 42 (70)
.|.+|+-.+ .++|.+.+-+.+|+|.
T Consensus 3 ~i~aia~g~--~~vavaTS~~~lRifs 27 (27)
T PF12341_consen 3 EIEAIAAGD--SWVAVATSAGYLRIFS 27 (27)
T ss_pred eEEEEEccC--CEEEEEeCCCeEEecC
Confidence 577888865 5888888899999973
No 313
>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []). The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].
Probab=72.94 E-value=9 Score=24.97 Aligned_cols=31 Identities=23% Similarity=0.296 Sum_probs=26.3
Q ss_pred CCeEEEEEcCCC------CEEEEEeCCCcEEEEECCC
Q psy11104 15 TKVNCLAWHQNQ------GWIAVGGDDGLLKVLKLDT 45 (70)
Q Consensus 15 ~~V~~va~spdg------~~LasGg~Dg~IklWdi~~ 45 (70)
+.|.+++|||.| -+||.-..+|.+.||.-..
T Consensus 86 ~~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~~~~ 122 (173)
T PF12657_consen 86 SQVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYGPPG 122 (173)
T ss_pred ccEEEEEECCCCCCCCCceEEEEEcCCCeEEEEecCC
Confidence 478999999954 4799999999999998663
No 314
>PF10008 DUF2251: Uncharacterized protein conserved in bacteria (DUF2251); InterPro: IPR014449 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=71.35 E-value=8.3 Score=24.10 Aligned_cols=30 Identities=13% Similarity=0.403 Sum_probs=24.3
Q ss_pred CeEEeeeeeecCCCCCeEEEEEcCCCCEEE
Q psy11104 1 MFIYLSKKIAIPNNTKVNCLAWHQNQGWIA 30 (70)
Q Consensus 1 ~~~~~~~~I~~~~~~~V~~va~spdg~~La 30 (70)
|.+|.+..|+..|....-.|.|+-||...+
T Consensus 41 L~IYNv~~v~~~~~~~~~~I~Wsedg~~a~ 70 (97)
T PF10008_consen 41 LHIYNVEDVSDKDEPRIVSICWSEDGQKAA 70 (97)
T ss_pred EEEEeeccccCCCCCceEEEEEcccccEEE
Confidence 568888888888888889999998876533
No 315
>PRK10526 acyl-CoA thioesterase II; Provisional
Probab=70.66 E-value=4.2 Score=28.85 Aligned_cols=25 Identities=16% Similarity=0.167 Sum_probs=19.8
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEE
Q psy11104 16 KVNCLAWHQNQGWIAVGGDDGLLKV 40 (70)
Q Consensus 16 ~V~~va~spdg~~LasGg~Dg~Ikl 40 (70)
-..+==|+.+|+++||+..+|.||.
T Consensus 260 ~~~g~i~~~~G~LvAs~~Qegl~r~ 284 (286)
T PRK10526 260 FVRGEFYTQDGVLVASTVQEGVMRN 284 (286)
T ss_pred EEEEEEECCCCCEEEEEEeeEEEEe
Confidence 3455568889999999999998875
No 316
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=70.27 E-value=11 Score=24.42 Aligned_cols=27 Identities=30% Similarity=0.342 Sum_probs=22.1
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCCCeE
Q psy11104 23 HQNQGWIAVGGDDGLLKVLKLDTVSLT 49 (70)
Q Consensus 23 spdg~~LasGg~Dg~IklWdi~~~~~~ 49 (70)
.+++..|..++.||.+..||.++++..
T Consensus 209 ~~~~~~l~~~~~~~~l~~~d~~tG~~~ 235 (238)
T PF13360_consen 209 SVDGGTLYVTSSDGRLYALDLKTGKVV 235 (238)
T ss_dssp ECCCTEEEEEETTTEEEEEETTTTEEE
T ss_pred eeeCCEEEEEeCCCEEEEEECCCCCEE
Confidence 456778888789999999999998754
No 317
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=69.72 E-value=11 Score=18.15 Aligned_cols=31 Identities=10% Similarity=0.074 Sum_probs=21.1
Q ss_pred CCCCE-EEEEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 24 QNQGW-IAVGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 24 pdg~~-LasGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
|+++. +++.-.+++|.++|..+.+..-.+.-
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~v 32 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPV 32 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCeEEEEEEC
Confidence 56664 55566788999999987765544433
No 318
>KOG4190|consensus
Probab=69.61 E-value=4.2 Score=33.19 Aligned_cols=34 Identities=12% Similarity=0.085 Sum_probs=28.7
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~ 47 (70)
.|+.+|+.+.|-.+.+++||+ ||-|.+||.--++
T Consensus 782 aHkk~i~~igfL~~lr~i~Sc--D~giHlWDPFigr 815 (1034)
T KOG4190|consen 782 AHKKPIHDIGFLADLRSIASC--DGGIHLWDPFIGR 815 (1034)
T ss_pred hccCcccceeeeeccceeeec--cCcceeecccccc
Confidence 588899999999999999876 9999999964444
No 319
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=68.26 E-value=9.9 Score=31.35 Aligned_cols=27 Identities=30% Similarity=0.727 Sum_probs=21.4
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy11104 15 TKVNCLAWHQNQGWIAVGGDDGLLKVLK 42 (70)
Q Consensus 15 ~~V~~va~spdg~~LasGg~Dg~IklWd 42 (70)
....|++=+.+ .+||.||.+|.|||+|
T Consensus 578 ~~Fs~~aTt~~-G~iavgs~~G~IRLyd 604 (794)
T PF08553_consen 578 NNFSCFATTED-GYIAVGSNKGDIRLYD 604 (794)
T ss_pred CCceEEEecCC-ceEEEEeCCCcEEeec
Confidence 34567766655 4889999999999998
No 320
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=68.06 E-value=32 Score=24.47 Aligned_cols=37 Identities=19% Similarity=0.323 Sum_probs=28.3
Q ss_pred eeecCCCCCeEEEEEcCCCCEE-EEEeCCCcEEEEECC
Q psy11104 8 KIAIPNNTKVNCLAWHQNQGWI-AVGGDDGLLKVLKLD 44 (70)
Q Consensus 8 ~I~~~~~~~V~~va~spdg~~L-asGg~Dg~IklWdi~ 44 (70)
.+..+....-+.++|+|+|+++ +.+-.+++|.++++.
T Consensus 185 ~~~~~~G~GPRh~~f~pdg~~~Yv~~e~s~~v~v~~~~ 222 (345)
T PF10282_consen 185 SIKVPPGSGPRHLAFSPDGKYAYVVNELSNTVSVFDYD 222 (345)
T ss_dssp EEECSTTSSEEEEEE-TTSSEEEEEETTTTEEEEEEEE
T ss_pred ccccccCCCCcEEEEcCCcCEEEEecCCCCcEEEEeec
Confidence 3455667778999999998875 555677789999987
No 321
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=67.39 E-value=12 Score=26.79 Aligned_cols=42 Identities=21% Similarity=0.184 Sum_probs=30.4
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEeccc
Q psy11104 14 NTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQE 57 (70)
Q Consensus 14 ~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~ 57 (70)
...+....|||+|+.+|-.. |+.|.+.+..++ ...++..+++
T Consensus 42 ~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~-~~~~lT~dg~ 83 (353)
T PF00930_consen 42 PPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATG-QETQLTTDGE 83 (353)
T ss_dssp ETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTS-EEEESES--T
T ss_pred ccccccceeecCCCeeEEEe-cCceEEEECCCC-CeEEeccccc
Confidence 35788999999999999875 678999988777 5555555543
No 322
>KOG1916|consensus
Probab=66.84 E-value=5.1 Score=34.12 Aligned_cols=22 Identities=14% Similarity=0.123 Sum_probs=20.5
Q ss_pred EcCCCCEEEEEeCCCcEEEEEC
Q psy11104 22 WHQNQGWIAVGGDDGLLKVLKL 43 (70)
Q Consensus 22 ~spdg~~LasGg~Dg~IklWdi 43 (70)
.||||..+|..+.||+++.|.+
T Consensus 243 lSpDGtv~a~a~~dG~v~f~Qi 264 (1283)
T KOG1916|consen 243 LSPDGTVFAWAISDGSVGFYQI 264 (1283)
T ss_pred eCCCCcEEEEeecCCccceeee
Confidence 6899999999999999999975
No 323
>PF01731 Arylesterase: Arylesterase; InterPro: IPR002640 The serum paraoxonases/arylesterases are enzymes that catalyse the hydrolysis of the toxic metabolites of a variety of organophosphorus insecticides. The enzymes hydrolyse a broad spectrum of organophosphate substrates, including paraoxon and a number of aromatic carboxylic acid esters (e.g., phenyl acetate), and hence confer resistance to organophosphate toxicity []. Mammals have 3 distinct paraoxonase types, termed PON1-3 [, ]. In mice and humans, the PON genes are found on the same chromosome in close proximity. PON activity has been found in variety of tissues, with highest levels in liver and serum - the source of serum PON is thought to be the liver. Unlike mammals, fish and avian species lack paraoxonase activity. Human and rabbit PONs appear to have two distinct Ca2+ binding sites, one required for stability and one required for catalytic activity. The Ca2+ dependency of PONs suggests a mechanism of hydrolysis where Ca2+ acts as the electrophillic catalyst, like that proposed for phospholipase A2. The paraoxonase enzymes, PON1 and PON3, are high density lipoprotein (HDL)- associated proteins capable of preventing oxidative modification of low density lipoproteins (LPL) []. Although PON2 has oxidative properties, the enzyme does not associate with HDL. Within a given species, PON1, PON2 and PON3 share ~60% amino acid sequence identity, whereas between mammalian species particular PONs (1,2 or 3) share 79-90% identity at the amino acid level. Human PON1 and PON3 share numerous conserved phosphorylation and N-glycosylation sites; however, it is not known whether the PON proteins are modified at these sites, or whether modification at these sites is required for activity in vivo []. This family consists of arylesterases (Also known as serum paraoxonase) 3.1.1.2 from EC. These enzymes hydrolyse organophosphorus esters such as paraoxon and are found in the liver and blood. They confer resistance to organophosphate toxicity []. Human arylesterase (PON1) P27169 from SWISSPROT is associated with HDL and may protect against LDL oxidation [].; GO: 0004064 arylesterase activity
Probab=66.62 E-value=16 Score=21.88 Aligned_cols=31 Identities=13% Similarity=0.154 Sum_probs=23.3
Q ss_pred CCeEEEEEcCCCCEE-EEEeCCCcEEEEECCC
Q psy11104 15 TKVNCLAWHQNQGWI-AVGGDDGLLKVLKLDT 45 (70)
Q Consensus 15 ~~V~~va~spdg~~L-asGg~Dg~IklWdi~~ 45 (70)
..-+.|+.+|++++| ++...++.|++++.+.
T Consensus 54 ~~aNGI~~s~~~k~lyVa~~~~~~I~vy~~~~ 85 (86)
T PF01731_consen 54 SFANGIAISPDKKYLYVASSLAHSIHVYKRHK 85 (86)
T ss_pred CCCceEEEcCCCCEEEEEeccCCeEEEEEecC
Confidence 356899999998775 4456778999988654
No 324
>PRK04043 tolB translocation protein TolB; Provisional
Probab=66.09 E-value=30 Score=25.80 Aligned_cols=34 Identities=3% Similarity=-0.066 Sum_probs=22.4
Q ss_pred CCCeEEEEEcCCCCEEEE-EeCC--CcEEEEECCCCC
Q psy11104 14 NTKVNCLAWHQNQGWIAV-GGDD--GLLKVLKLDTVS 47 (70)
Q Consensus 14 ~~~V~~va~spdg~~Las-Gg~D--g~IklWdi~~~~ 47 (70)
.+...+.+|+|||+.|+- .+.+ ..|.++|++++.
T Consensus 232 ~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~ 268 (419)
T PRK04043 232 QGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKT 268 (419)
T ss_pred CCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCCc
Confidence 344567889999986654 3334 457777877664
No 325
>cd03444 Thioesterase_II_repeat1 Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) domains, respectively. TEII has two tandem asymmetric hot dog folds that are structurally similar to one found in PaaI thioesterase, 4-hydroxybenzoyl-CoA thioesterase (4HBT) and beta-hydroxydecanoyl-ACP dehydratase and thus, the TEII monomer is equivalent to the homodimeric form of the latter three enzymes. Human TEII is expressed in T cells and has been shown to bind the product of the HIV-1 Nef gene.
Probab=65.54 E-value=4.3 Score=24.55 Aligned_cols=23 Identities=17% Similarity=0.241 Sum_probs=18.5
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCc
Q psy11104 15 TKVNCLAWHQNQGWIAVGGDDGL 37 (70)
Q Consensus 15 ~~V~~va~spdg~~LasGg~Dg~ 37 (70)
+...+--|+++|+++|++..+|.
T Consensus 81 ~~~~~~l~~~~G~LvAs~~Q~~l 103 (104)
T cd03444 81 GLVEGRIFTRDGELVASVAQEGL 103 (104)
T ss_pred eEEEEEEECCCCCEEEEEEEeee
Confidence 44566779999999999988764
No 326
>KOG1064|consensus
Probab=64.39 E-value=17 Score=33.28 Aligned_cols=40 Identities=13% Similarity=0.258 Sum_probs=33.6
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 15 TKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 15 ~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
..|.++.=||...+-+||+.||.|++|....+...+..+-
T Consensus 2209 ~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt 2248 (2439)
T KOG1064|consen 2209 ENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRT 2248 (2439)
T ss_pred CceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeec
Confidence 4578888899999999999999999999888777666543
No 327
>smart00564 PQQ beta-propeller repeat. Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.
Probab=63.82 E-value=14 Score=17.06 Aligned_cols=22 Identities=32% Similarity=0.373 Sum_probs=17.6
Q ss_pred EEEEEeCCCcEEEEECCCCCeE
Q psy11104 28 WIAVGGDDGLLKVLKLDTVSLT 49 (70)
Q Consensus 28 ~LasGg~Dg~IklWdi~~~~~~ 49 (70)
.+..++.||.+.-.|.++++..
T Consensus 8 ~v~~~~~~g~l~a~d~~~G~~~ 29 (33)
T smart00564 8 TVYVGSTDGTLYALDAKTGEIL 29 (33)
T ss_pred EEEEEcCCCEEEEEEcccCcEE
Confidence 5667788999999998887654
No 328
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=63.52 E-value=29 Score=26.42 Aligned_cols=34 Identities=9% Similarity=0.059 Sum_probs=28.8
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy11104 14 NTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 14 ~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~ 47 (70)
.-.+.+|+.+|++.+.|....=|.|.|+|+.++.
T Consensus 307 ~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~ 340 (415)
T PF14655_consen 307 KREGESICLSPSGRLAAVTDSLGRVLLIDVARGI 340 (415)
T ss_pred CceEEEEEECCCCCEEEEEcCCCcEEEEECCCCh
Confidence 4568899999999999988777899999987764
No 329
>KOG1920|consensus
Probab=62.86 E-value=10 Score=32.75 Aligned_cols=34 Identities=24% Similarity=0.415 Sum_probs=28.3
Q ss_pred eEEEEEcCCCCEEEE---EeCCCcEEEEECCCCCeEE
Q psy11104 17 VNCLAWHQNQGWIAV---GGDDGLLKVLKLDTVSLTI 50 (70)
Q Consensus 17 V~~va~spdg~~Las---Gg~Dg~IklWdi~~~~~~~ 50 (70)
|..++||.++..||. ..+...|++|.+.+-.+-.
T Consensus 292 ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~~NyhWYL 328 (1265)
T KOG1920|consen 292 VEELAWNSNSDILAVVTSNLENSLVQLWTTGNYHWYL 328 (1265)
T ss_pred hheeeecCCCCceeeeecccccceEEEEEecCeEEEE
Confidence 899999999999998 6666679999988776443
No 330
>PRK02888 nitrous-oxide reductase; Validated
Probab=61.86 E-value=9.1 Score=30.86 Aligned_cols=37 Identities=11% Similarity=0.123 Sum_probs=29.3
Q ss_pred CCCCCeEEEEEcCCCCEE-EEEeCCCcEEEEECCCCCe
Q psy11104 12 PNNTKVNCLAWHQNQGWI-AVGGDDGLLKVLKLDTVSL 48 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~L-asGg~Dg~IklWdi~~~~~ 48 (70)
+-......++++|||+++ ++|..+.+|.+.|++..+.
T Consensus 318 PVGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~ 355 (635)
T PRK02888 318 PVPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDD 355 (635)
T ss_pred ECCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhh
Confidence 345567899999999875 5566799999999988664
No 331
>PF13570 PQQ_3: PQQ-like domain; PDB: 3HXJ_B 3Q54_A.
Probab=60.94 E-value=19 Score=17.69 Aligned_cols=21 Identities=38% Similarity=0.468 Sum_probs=15.5
Q ss_pred CCCEEEEEeCCCcEEEEECCC
Q psy11104 25 NQGWIAVGGDDGLLKVLKLDT 45 (70)
Q Consensus 25 dg~~LasGg~Dg~IklWdi~~ 45 (70)
.+..+..++.||.+.-.|.++
T Consensus 20 ~~g~vyv~~~dg~l~ald~~t 40 (40)
T PF13570_consen 20 AGGRVYVGTGDGNLYALDAAT 40 (40)
T ss_dssp CTSEEEEE-TTSEEEEEETT-
T ss_pred ECCEEEEEcCCCEEEEEeCCC
Confidence 366788889999999988764
No 332
>KOG4460|consensus
Probab=60.58 E-value=13 Score=30.03 Aligned_cols=33 Identities=15% Similarity=0.373 Sum_probs=27.0
Q ss_pred CeEEEEEcCCC---CEEEEEeCCCcEEEEECCCCCe
Q psy11104 16 KVNCLAWHQNQ---GWIAVGGDDGLLKVLKLDTVSL 48 (70)
Q Consensus 16 ~V~~va~spdg---~~LasGg~Dg~IklWdi~~~~~ 48 (70)
.+..++|||+. .+|..=+.|..||++|....+.
T Consensus 167 tl~Qa~WHP~S~~D~hL~iL~sdnviRiy~lS~~te 202 (741)
T KOG4460|consen 167 TLKQAAWHPSSILDPHLVLLTSDNVIRIYSLSEPTE 202 (741)
T ss_pred eeeeccccCCccCCceEEEEecCcEEEEEecCCcch
Confidence 56789999986 5677778899999999877653
No 333
>KOG1272|consensus
Probab=59.67 E-value=6.3 Score=31.08 Aligned_cols=41 Identities=20% Similarity=0.223 Sum_probs=35.4
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 14 NTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 14 ~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
...|+-+.|-|.--+||++|+.|.++.-|+.+++.+..+..
T Consensus 209 ~~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t 249 (545)
T KOG1272|consen 209 HIRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRT 249 (545)
T ss_pred cCchhhhcccchhheeeecccCCceEEEeechhhhhHHHHc
Confidence 46788999999999999999999999999999987665443
No 334
>PF02870 Methyltransf_1N: 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain; InterPro: IPR008332 Synonym(s): 6-O-methylguanine-DNA methyltransferase, O-6-methylguanine-DNA-alkyltransferase The repair of DNA containing O6-alkylated guanine is carried out by DNA-[protein]-cysteine S-methyltransferase (2.1.1.63 from EC). The major mutagenic and carcinogenic effect of methylating agents in DNA is the formation of O6-alkylguanine. The alkyl group at the O-6 position is transferred to a cysteine residue in the enzyme []. This is a suicide reaction since the enzyme is irreversibly inactivated and the methylated protein accumulates as a dead-end product. Most, but not all of the methyltransferases are also able to repair O-4-methylthymine. DNA-[protein]-cysteine S-methyltransferases are widely distributed and are found in various prokaryotic and eukaryotic sources []. This group of proteins are characterised by having an N-terminal ribonuclease-like domain associated with 6-O-methylguanine DNA methyltransferase activity (IPR001497 from INTERPRO).; GO: 0003908 methylated-DNA-[protein]-cysteine S-methyltransferase activity, 0006281 DNA repair; PDB: 1SFE_A 1T39_B 1T38_A 1EH7_A 1EH6_A 1YFH_C 1EH8_A 1QNT_A.
Probab=58.86 E-value=9.8 Score=21.40 Aligned_cols=21 Identities=10% Similarity=0.004 Sum_probs=17.7
Q ss_pred cCCCCEEEEEeCCCcEEEEEC
Q psy11104 23 HQNQGWIAVGGDDGLLKVLKL 43 (70)
Q Consensus 23 spdg~~LasGg~Dg~IklWdi 43 (70)
+|-|.+++.+++.|.+.|+=.
T Consensus 9 sPlG~l~l~a~e~gL~~i~f~ 29 (77)
T PF02870_consen 9 SPLGPLLLAASEKGLCGIDFE 29 (77)
T ss_dssp ETTEEEEEEEETTCEEEEEEE
T ss_pred CCCeEEEEEEECCeEEEEEEC
Confidence 688999999999998888743
No 335
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=58.73 E-value=45 Score=24.81 Aligned_cols=37 Identities=19% Similarity=0.299 Sum_probs=27.3
Q ss_pred eecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy11104 9 IAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 9 I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~ 47 (70)
|..++ +.+-++.|+.+ +.|+.-.+||.++++|+....
T Consensus 76 i~w~~-~~iv~~~wt~~-e~LvvV~~dG~v~vy~~~G~~ 112 (410)
T PF04841_consen 76 IPWDS-GRIVGMGWTDD-EELVVVQSDGTVRVYDLFGEF 112 (410)
T ss_pred EEECC-CCEEEEEECCC-CeEEEEEcCCEEEEEeCCCce
Confidence 44444 78899999875 455566899999999986443
No 336
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=57.95 E-value=43 Score=24.01 Aligned_cols=31 Identities=16% Similarity=0.226 Sum_probs=24.6
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCe
Q psy11104 16 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSL 48 (70)
Q Consensus 16 ~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~ 48 (70)
..++++|.|||.++++ -..|.|++.+ ..+..
T Consensus 3 ~P~~~a~~pdG~l~v~-e~~G~i~~~~-~~g~~ 33 (331)
T PF07995_consen 3 NPRSMAFLPDGRLLVA-ERSGRIWVVD-KDGSL 33 (331)
T ss_dssp SEEEEEEETTSCEEEE-ETTTEEEEEE-TTTEE
T ss_pred CceEEEEeCCCcEEEE-eCCceEEEEe-CCCcC
Confidence 3578999999999887 5599999999 44443
No 337
>PF14157 YmzC: YmzC-like protein; PDB: 3KVP_E.
Probab=57.78 E-value=19 Score=20.82 Aligned_cols=28 Identities=29% Similarity=0.421 Sum_probs=20.5
Q ss_pred CCEEEEEeCCCcEEEEECCCCCeEEEEE
Q psy11104 26 QGWIAVGGDDGLLKVLKLDTVSLTIMII 53 (70)
Q Consensus 26 g~~LasGg~Dg~IklWdi~~~~~~~~~~ 53 (70)
.+.+|--++||.|||+.+...+.-+.+.
T Consensus 29 ~N~Fav~~e~~~iKIfkyd~~tNei~L~ 56 (63)
T PF14157_consen 29 HNHFAVVDEDGQIKIFKYDEDTNEITLK 56 (63)
T ss_dssp TTEEEEE-ETTEEEEEEEETTTTEEEEE
T ss_pred CCEEEEEecCCeEEEEEeCCCCCeEEEE
Confidence 4678888999999999887666555544
No 338
>PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins. RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A.
Probab=56.73 E-value=36 Score=24.92 Aligned_cols=38 Identities=18% Similarity=0.185 Sum_probs=28.1
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEE
Q psy11104 15 TKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMI 52 (70)
Q Consensus 15 ~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~ 52 (70)
..|.+++..+.-+.|.+-.++|.|.+|++..+......
T Consensus 190 ~~I~~v~~d~~r~~ly~l~~~~~Iq~w~l~~~~~~~~~ 227 (422)
T PF08801_consen 190 PKIVQVAVDPSRRLLYTLTSDGSIQVWDLGPGGSTLVS 227 (422)
T ss_dssp --EEEEEEETTTTEEEEEESSE-EEEEEE-SS-EEEEE
T ss_pred hceeeEEecCCcCEEEEEeCCCcEEEEEEeCCCCceee
Confidence 34999999988899999999999999999865444433
No 339
>KOG1275|consensus
Probab=54.96 E-value=8.5 Score=32.67 Aligned_cols=34 Identities=15% Similarity=0.259 Sum_probs=26.6
Q ss_pred CCCCCeEEEEEcCCCCEEEEEe---------CCCcEEEEECCCCC
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGG---------DDGLLKVLKLDTVS 47 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg---------~Dg~IklWdi~~~~ 47 (70)
+|++.|.. |+-.|++|+||| .|..|++||++.-+
T Consensus 215 aHs~siSD--fDv~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmr 257 (1118)
T KOG1275|consen 215 AHSGSISD--FDVQGNLLITCGYSMRRYNLAMDPFVKVYDLRMMR 257 (1118)
T ss_pred ccccceee--eeccCCeEEEeecccccccccccchhhhhhhhhhh
Confidence 68888765 555799999986 57779999988654
No 340
>KOG2377|consensus
Probab=54.89 E-value=34 Score=27.44 Aligned_cols=33 Identities=6% Similarity=0.164 Sum_probs=29.2
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy11104 13 NNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDT 45 (70)
Q Consensus 13 ~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~ 45 (70)
..++|.+|.||+|.+.||.--.|++|.+.+...
T Consensus 65 d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~ 97 (657)
T KOG2377|consen 65 DKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIP 97 (657)
T ss_pred CCCceeEEEeccCcceEEEEecCceEEEEecCC
Confidence 357999999999999999999999999998733
No 341
>KOG3616|consensus
Probab=54.68 E-value=22 Score=30.40 Aligned_cols=33 Identities=9% Similarity=0.116 Sum_probs=27.8
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy11104 15 TKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 15 ~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~ 47 (70)
..+.+|.=+|-|+-+++|+.||+|++++....+
T Consensus 15 e~~~aiqshp~~~s~v~~~~d~si~lfn~~~r~ 47 (1636)
T KOG3616|consen 15 EFTTAIQSHPGGQSFVLAHQDGSIILFNFIPRR 47 (1636)
T ss_pred ceeeeeeecCCCceEEEEecCCcEEEEeecccc
Confidence 457788889999999999999999999965443
No 342
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=54.58 E-value=34 Score=24.20 Aligned_cols=30 Identities=23% Similarity=0.331 Sum_probs=24.4
Q ss_pred CCCEEEEEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 25 NQGWIAVGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 25 dg~~LasGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
.+..|..++.||.+.++|.++++..-+...
T Consensus 319 ~g~~l~~~~~~G~l~~~d~~tG~~~~~~~~ 348 (377)
T TIGR03300 319 VGGYLVVGDFEGYLHWLSREDGSFVARLKT 348 (377)
T ss_pred ECCEEEEEeCCCEEEEEECCCCCEEEEEEc
Confidence 367889999999999999998887665443
No 343
>KOG1008|consensus
Probab=54.43 E-value=3.7 Score=33.52 Aligned_cols=35 Identities=23% Similarity=0.488 Sum_probs=28.2
Q ss_pred CCCCCeEEEEEcCC-CCEEEEE----eCCCcEEEEECCCC
Q psy11104 12 PNNTKVNCLAWHQN-QGWIAVG----GDDGLLKVLKLDTV 46 (70)
Q Consensus 12 ~~~~~V~~va~spd-g~~LasG----g~Dg~IklWdi~~~ 46 (70)
++....++++|++- .++||.| -.|-.++|||+.+.
T Consensus 100 ~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi~s~ 139 (783)
T KOG1008|consen 100 GYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDINSL 139 (783)
T ss_pred cccccccccccccccHHHHHhhhhhhcccCCccceecccc
Confidence 56678999999984 7888887 34668999998776
No 344
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=53.61 E-value=43 Score=24.01 Aligned_cols=28 Identities=11% Similarity=0.032 Sum_probs=20.3
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEE
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLK 39 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~Ik 39 (70)
.....+..|++.|||.+.++-..+|.|.
T Consensus 303 ~~~~r~~~v~~~pDG~Lyv~~d~~G~iy 330 (331)
T PF07995_consen 303 GFGGRPRDVAQGPDGALYVSDDSDGKIY 330 (331)
T ss_dssp TSSS-EEEEEEETTSEEEEEE-TTTTEE
T ss_pred cCCCCceEEEEcCCCeEEEEECCCCeEe
Confidence 3445789999999999888877788763
No 345
>PF13418 Kelch_4: Galactose oxidase, central domain; PDB: 2UVK_B.
Probab=53.42 E-value=19 Score=18.18 Aligned_cols=27 Identities=22% Similarity=0.332 Sum_probs=16.2
Q ss_pred CCCCEEEEEeCCC------cEEEEECCCCCeEE
Q psy11104 24 QNQGWIAVGGDDG------LLKVLKLDTVSLTI 50 (70)
Q Consensus 24 pdg~~LasGg~Dg------~IklWdi~~~~~~~ 50 (70)
.++.+++.||.+. .+.++|+++.++..
T Consensus 11 ~~~~i~v~GG~~~~~~~~~d~~~~d~~~~~W~~ 43 (49)
T PF13418_consen 11 GDNSIYVFGGRDSSGSPLNDLWIFDIETNTWTR 43 (49)
T ss_dssp -TTEEEEE--EEE-TEE---EEEEETTTTEEEE
T ss_pred eCCeEEEECCCCCCCcccCCEEEEECCCCEEEE
Confidence 5577888877555 47778888877643
No 346
>KOG1645|consensus
Probab=53.21 E-value=30 Score=26.91 Aligned_cols=33 Identities=15% Similarity=0.349 Sum_probs=28.4
Q ss_pred CCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCC
Q psy11104 15 TKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 15 ~~V~~va~spd-g~~LasGg~Dg~IklWdi~~~~ 47 (70)
..+++++|.-| ..+|-.|-..|.|.++|.+..+
T Consensus 236 ~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R~~~ 269 (463)
T KOG1645|consen 236 NQIWSCCWDLDERHVIYAGLQNGMVLVYDMRQPE 269 (463)
T ss_pred CCceeeeeccCCcceeEEeccCceEEEEEccCCC
Confidence 67999999998 5678888899999999987655
No 347
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=52.74 E-value=39 Score=23.82 Aligned_cols=32 Identities=13% Similarity=0.192 Sum_probs=21.9
Q ss_pred CCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCC
Q psy11104 15 TKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTV 46 (70)
Q Consensus 15 ~~V~~va~spd-g~~LasGg~Dg~IklWdi~~~ 46 (70)
..+.+++++|. |.+++-..+...+-..|.+..
T Consensus 171 ~d~S~l~~~p~t~~lliLS~es~~l~~~d~~G~ 203 (248)
T PF06977_consen 171 RDLSGLSYDPRTGHLLILSDESRLLLELDRQGR 203 (248)
T ss_dssp S---EEEEETTTTEEEEEETTTTEEEEE-TT--
T ss_pred ccccceEEcCCCCeEEEEECCCCeEEEECCCCC
Confidence 45789999998 778888889999999884444
No 348
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=51.72 E-value=36 Score=27.70 Aligned_cols=31 Identities=13% Similarity=0.362 Sum_probs=22.7
Q ss_pred CCCCCeEEEEEcCCCCEEEEE-eCCCcEEEEE
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVG-GDDGLLKVLK 42 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasG-g~Dg~IklWd 42 (70)
...+.|.|.+|.+||+.|+.+ |.-=.-.+||
T Consensus 153 ~~~G~IhCACWT~DG~RLVVAvGSsLHSyiWd 184 (671)
T PF15390_consen 153 KTSGLIHCACWTKDGQRLVVAVGSSLHSYIWD 184 (671)
T ss_pred cCCceEEEEEecCcCCEEEEEeCCeEEEEEec
Confidence 347889999999999876654 3333567887
No 349
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=51.39 E-value=36 Score=27.36 Aligned_cols=47 Identities=17% Similarity=0.133 Sum_probs=40.6
Q ss_pred CeEEeeeeeecCCCCCeEEEEEcCCCCEEEEEeCCC-cEEEEECCCCC
Q psy11104 1 MFIYLSKKIAIPNNTKVNCLAWHQNQGWIAVGGDDG-LLKVLKLDTVS 47 (70)
Q Consensus 1 ~~~~~~~~I~~~~~~~V~~va~spdg~~LasGg~Dg-~IklWdi~~~~ 47 (70)
|..|.--.|..+|.+.|.-..+..+++-++.|..|| .+-|+|.+++.
T Consensus 346 ~~~~~~~~iqv~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e 393 (668)
T COG4946 346 MRPWDGYSIQVGKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGE 393 (668)
T ss_pred ECCCCCeeEEcCCCCceEEEEEccCCcceEEeccCCceEEEEecCCce
Confidence 445666778889999999999999988999999999 99999988776
No 350
>TIGR00189 tesB acyl-CoA thioesterase II. Subunit: homotetramer.
Probab=51.10 E-value=20 Score=24.54 Aligned_cols=23 Identities=22% Similarity=0.238 Sum_probs=14.0
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcE
Q psy11104 16 KVNCLAWHQNQGWIAVGGDDGLL 38 (70)
Q Consensus 16 ~V~~va~spdg~~LasGg~Dg~I 38 (70)
.+.+-=|+.+|.++|++..++.+
T Consensus 248 ~~~~~l~d~~G~lvAs~~Qe~l~ 270 (271)
T TIGR00189 248 LVEGKIFTRDGVLIASTVQEGLV 270 (271)
T ss_pred EEEEEEECCCCCEEEEEEeeeec
Confidence 34455566666666666666654
No 351
>COG2828 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=51.09 E-value=13 Score=28.04 Aligned_cols=33 Identities=15% Similarity=0.256 Sum_probs=24.1
Q ss_pred EEEEEcCC-CCEEEEEe-------------CCCcEEEEECCCCCeEE
Q psy11104 18 NCLAWHQN-QGWIAVGG-------------DDGLLKVLKLDTVSLTI 50 (70)
Q Consensus 18 ~~va~spd-g~~LasGg-------------~Dg~IklWdi~~~~~~~ 50 (70)
..|+|++| |+++|..| ..-.||||+..+++..+
T Consensus 87 ~~VD~sgNCGNl~AaVGpFAIe~GLV~a~~g~t~VRI~~~Nt~k~I~ 133 (378)
T COG2828 87 PFVDWSGNCGNLLAAVGPFAIEAGLVDAAEGVTAVRIWNVNTGKTIE 133 (378)
T ss_pred ccccCCCCccchhhccchhhhhhCcccCCCCceEEEEEeccCcceEE
Confidence 36899999 88776543 34479999988877443
No 352
>COG1946 TesB Acyl-CoA thioesterase [Lipid metabolism]
Probab=50.58 E-value=13 Score=27.23 Aligned_cols=26 Identities=19% Similarity=0.224 Sum_probs=20.3
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEE
Q psy11104 16 KVNCLAWHQNQGWIAVGGDDGLLKVL 41 (70)
Q Consensus 16 ~V~~va~spdg~~LasGg~Dg~IklW 41 (70)
-+..==|+.+|++||+.+..|.+|.-
T Consensus 260 l~~G~lf~r~G~LiA~~~QEG~~r~~ 285 (289)
T COG1946 260 LVRGQLFDRDGQLIASVVQEGLIRYH 285 (289)
T ss_pred eeeeEEEcCCCCEEEEEeeeEEEecc
Confidence 34445588899999999999988764
No 353
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=50.37 E-value=25 Score=24.73 Aligned_cols=47 Identities=15% Similarity=0.215 Sum_probs=33.4
Q ss_pred eeecCCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCCe---EEEEEecc
Q psy11104 8 KIAIPNNTKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTVSL---TIMIILFQ 56 (70)
Q Consensus 8 ~I~~~~~~~V~~va~spd-g~~LasGg~Dg~IklWdi~~~~~---~~~~~~~~ 56 (70)
-|+.|-+..+.||+--|. |+++++ .++++.||.++.+.. .+++..|.
T Consensus 128 iiElPl~~~p~ciaCC~~tG~LlVg--~~~~l~lf~l~~~~~~~~~~~~lDFe 178 (215)
T PF14761_consen 128 IIELPLSEPPLCIACCPVTGNLLVG--CGNKLVLFTLKYQTIQSEKFSFLDFE 178 (215)
T ss_pred EEEecCCCCCCEEEecCCCCCEEEE--cCCEEEEEEEEEEEEecccccEEech
Confidence 466777888999999998 777664 377899998765443 33555553
No 354
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=50.32 E-value=37 Score=25.03 Aligned_cols=27 Identities=7% Similarity=0.096 Sum_probs=21.6
Q ss_pred EEEEcCCCCEEEEE-----eCCCcEEEEECCC
Q psy11104 19 CLAWHQNQGWIAVG-----GDDGLLKVLKLDT 45 (70)
Q Consensus 19 ~va~spdg~~LasG-----g~Dg~IklWdi~~ 45 (70)
--+|||||++|.+- +..|.|-|||.+.
T Consensus 55 Hg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~ 86 (305)
T PF07433_consen 55 HGVFSPDGRLLYTTENDYETGRGVIGVYDAAR 86 (305)
T ss_pred CEEEcCCCCEEEEeccccCCCcEEEEEEECcC
Confidence 45799999998874 4567899999883
No 355
>PF01344 Kelch_1: Kelch motif; InterPro: IPR006652 Kelch is a 50-residue motif, named after the Drosophila mutant in which it was first identified []. This sequence motif represents one beta-sheet blade, and several of these repeats can associate to form a beta-propeller. For instance, the motif appears 6 times in Drosophila egg-chamber regulatory protein, creating a 6-bladed beta-propeller. The motif is also found in mouse protein MIPP [] and in a number of poxviruses. In addition, kelch repeats have been recognised in alpha- and beta-scruin [, ], and in galactose oxidase from the fungus Dactylium dendroides [, ]. The structure of galactose oxidase reveals that the repeated sequence corresponds to a 4-stranded anti-parallel beta-sheet motif that forms the repeat unit in a super-barrel structural fold []. The known functions of kelch-containing proteins are diverse: scruin is an actin cross-linking protein; galactose oxidase catalyses the oxidation of the hydroxyl group at the C6 position in D-galactose; neuraminidase hydrolyses sialic acid residues from glycoproteins; and kelch may have a cytoskeletal function, as it is localised to the actin-rich ring canals that connect the 15 nurse cells to the developing oocyte in Drosophila []. Nevertheless, based on the location of the kelch pattern in the catalytic unit in galactose oxidase, functionally important residues have been predicted in glyoxal oxidase []. This entry represents a type of kelch sequence motif that comprises one beta-sheet blade.; GO: 0005515 protein binding; PDB: 2XN4_A 2WOZ_A 3II7_A 4ASC_A 1U6D_X 1ZGK_A 2FLU_X 2VPJ_A 2DYH_A 1X2R_A ....
Probab=49.65 E-value=28 Score=17.19 Aligned_cols=25 Identities=24% Similarity=0.383 Sum_probs=17.1
Q ss_pred CCCEEEEEeCCC------cEEEEECCCCCeE
Q psy11104 25 NQGWIAVGGDDG------LLKVLKLDTVSLT 49 (70)
Q Consensus 25 dg~~LasGg~Dg------~IklWdi~~~~~~ 49 (70)
++.+.+.||.++ ++..||.+++++.
T Consensus 11 ~~~iyv~GG~~~~~~~~~~v~~yd~~~~~W~ 41 (47)
T PF01344_consen 11 GNKIYVIGGYDGNNQPTNSVEVYDPETNTWE 41 (47)
T ss_dssp TTEEEEEEEBESTSSBEEEEEEEETTTTEEE
T ss_pred CCEEEEEeeecccCceeeeEEEEeCCCCEEE
Confidence 677788888777 4666666666544
No 356
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=49.59 E-value=25 Score=25.45 Aligned_cols=31 Identities=23% Similarity=0.161 Sum_probs=21.2
Q ss_pred CCCeEEEEEcCCCCEEEEE-eCCCcEEEEECC
Q psy11104 14 NTKVNCLAWHQNQGWIAVG-GDDGLLKVLKLD 44 (70)
Q Consensus 14 ~~~V~~va~spdg~~LasG-g~Dg~IklWdi~ 44 (70)
-..-|.|+||||++.+... +..+.|.-+++.
T Consensus 162 ~~~~NGla~SpDg~tly~aDT~~~~i~r~~~d 193 (307)
T COG3386 162 LTIPNGLAFSPDGKTLYVADTPANRIHRYDLD 193 (307)
T ss_pred EEecCceEECCCCCEEEEEeCCCCeEEEEecC
Confidence 3445899999999665544 445677777665
No 357
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=48.26 E-value=39 Score=24.29 Aligned_cols=38 Identities=16% Similarity=0.272 Sum_probs=29.8
Q ss_pred CCCCeEEEEEcCCCCEEEEEe------CCCcEEEEECCCCCeEE
Q psy11104 13 NNTKVNCLAWHQNQGWIAVGG------DDGLLKVLKLDTVSLTI 50 (70)
Q Consensus 13 ~~~~V~~va~spdg~~LasGg------~Dg~IklWdi~~~~~~~ 50 (70)
-.+.|.++.|..+.++++.|. ....+-.||.+++.+..
T Consensus 35 i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~w~~ 78 (281)
T PF12768_consen 35 ISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQTWSS 78 (281)
T ss_pred ceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCeeee
Confidence 457899999987788888884 56678889988877643
No 358
>KOG1912|consensus
Probab=47.86 E-value=31 Score=29.21 Aligned_cols=38 Identities=18% Similarity=0.257 Sum_probs=30.1
Q ss_pred CCCCeEEEEEcCC------------CCEEEEEeCCCcEEEEECCCCCeEE
Q psy11104 13 NNTKVNCLAWHQN------------QGWIAVGGDDGLLKVLKLDTVSLTI 50 (70)
Q Consensus 13 ~~~~V~~va~spd------------g~~LasGg~Dg~IklWdi~~~~~~~ 50 (70)
|.+.|+.|.|.|- .-+||++.-.|.|.+||...+...+
T Consensus 54 h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~d~~~~s~~~ 103 (1062)
T KOG1912|consen 54 HQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILVDFVLASVIN 103 (1062)
T ss_pred CccceeEEEeccCCCchhccCccccceeEEeccccCcEEEEEehhhhhhh
Confidence 5789999999873 1268999999999999987665443
No 359
>PF11090 DUF2833: Protein of unknown function (DUF2833); InterPro: IPR020335 This entry contains proteins with no known function.
Probab=47.80 E-value=20 Score=21.93 Aligned_cols=29 Identities=21% Similarity=0.399 Sum_probs=22.2
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEECCCCCe
Q psy11104 19 CLAWHQNQGWIAVGGDDGLLKVLKLDTVSL 48 (70)
Q Consensus 19 ~va~spdg~~LasGg~Dg~IklWdi~~~~~ 48 (70)
||..+..|..+|.||.+| =++|-+.++..
T Consensus 2 ~v~~~~~g~~lAiGG~~g-~~~Wfvtt~~v 30 (86)
T PF11090_consen 2 CVTIEHKGRPLAIGGNNG-GCLWFVTTNKV 30 (86)
T ss_pred eEEEecCCeEEEEccccC-CeEEEEECcHH
Confidence 667778899999999996 45787666543
No 360
>PF13964 Kelch_6: Kelch motif
Probab=47.41 E-value=32 Score=17.47 Aligned_cols=25 Identities=16% Similarity=0.141 Sum_probs=16.5
Q ss_pred CCCEEEEEeCCC------cEEEEECCCCCeE
Q psy11104 25 NQGWIAVGGDDG------LLKVLKLDTVSLT 49 (70)
Q Consensus 25 dg~~LasGg~Dg------~IklWdi~~~~~~ 49 (70)
++++.+.||.++ .+.++|+++.++.
T Consensus 11 ~~~iyv~GG~~~~~~~~~~v~~yd~~t~~W~ 41 (50)
T PF13964_consen 11 GGKIYVFGGYDNSGKYSNDVERYDPETNTWE 41 (50)
T ss_pred CCEEEEECCCCCCCCccccEEEEcCCCCcEE
Confidence 567777777665 4666677776654
No 361
>KOG3630|consensus
Probab=46.42 E-value=34 Score=29.96 Aligned_cols=33 Identities=12% Similarity=0.286 Sum_probs=28.3
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLD 44 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~ 44 (70)
+-...+.||+|+|-|+.++.|-..|++.-+...
T Consensus 196 p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~ 228 (1405)
T KOG3630|consen 196 PVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPS 228 (1405)
T ss_pred CcccceeeEEeccccceeeEecCCCeEEEeecc
Confidence 445678999999999999999999999888643
No 362
>KOG4532|consensus
Probab=46.32 E-value=53 Score=24.59 Aligned_cols=33 Identities=21% Similarity=0.273 Sum_probs=28.8
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeE
Q psy11104 17 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLT 49 (70)
Q Consensus 17 V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~ 49 (70)
+++++.++|+.++++.|+-..|-.+.+....+-
T Consensus 161 ~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey 193 (344)
T KOG4532|consen 161 QNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEY 193 (344)
T ss_pred eeeeEEcCCCceEEEecCCCcceEEEeCCccce
Confidence 889999999999999999999999988665543
No 363
>KOG2395|consensus
Probab=46.29 E-value=18 Score=29.14 Aligned_cols=25 Identities=28% Similarity=0.607 Sum_probs=18.6
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEEC
Q psy11104 18 NCLAWHQNQGWIAVGGDDGLLKVLKL 43 (70)
Q Consensus 18 ~~va~spdg~~LasGg~Dg~IklWdi 43 (70)
.|.+=..+ .+||.||.+|.|||+|-
T Consensus 434 sc~aTT~s-G~IvvgS~~GdIRLYdr 458 (644)
T KOG2395|consen 434 SCFATTES-GYIVVGSLKGDIRLYDR 458 (644)
T ss_pred ceeeecCC-ceEEEeecCCcEEeehh
Confidence 44444333 58999999999999983
No 364
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=45.53 E-value=61 Score=21.51 Aligned_cols=29 Identities=17% Similarity=0.129 Sum_probs=15.1
Q ss_pred EEEEcC-CCCEEEEEeCCCcEEEEECCCCC
Q psy11104 19 CLAWHQ-NQGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 19 ~va~sp-dg~~LasGg~Dg~IklWdi~~~~ 47 (70)
+++|.+ ++.++.+--..+.|..|+..++.
T Consensus 4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~~ 33 (246)
T PF08450_consen 4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTGE 33 (246)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTTTE
T ss_pred ceEEECCCCEEEEEEcCCCEEEEEECCCCe
Confidence 445555 35555555555555555554443
No 365
>PF06739 SBBP: Beta-propeller repeat; InterPro: IPR010620 This family is related to IPR001680 from INTERPRO and is likely to also form a beta-propeller. SBBP stands for Seven Bladed Beta Propeller.
Probab=45.35 E-value=41 Score=16.88 Aligned_cols=22 Identities=23% Similarity=0.181 Sum_probs=19.2
Q ss_pred CCeEEEEEcCCCCEEEEEeCCC
Q psy11104 15 TKVNCLAWHQNQGWIAVGGDDG 36 (70)
Q Consensus 15 ~~V~~va~spdg~~LasGg~Dg 36 (70)
...+.|+..++|+..++|..++
T Consensus 13 ~~~~~IavD~~GNiYv~G~T~~ 34 (38)
T PF06739_consen 13 DYGNGIAVDSNGNIYVTGYTNG 34 (38)
T ss_pred eeEEEEEECCCCCEEEEEeecC
Confidence 4589999999999999998776
No 366
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=44.88 E-value=51 Score=21.20 Aligned_cols=30 Identities=27% Similarity=0.259 Sum_probs=23.7
Q ss_pred CCCEEEEEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 25 NQGWIAVGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 25 dg~~LasGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
++..+..++.++.+..||..+++..-+...
T Consensus 35 ~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~ 64 (238)
T PF13360_consen 35 DGGRVYVASGDGNLYALDAKTGKVLWRFDL 64 (238)
T ss_dssp ETTEEEEEETTSEEEEEETTTSEEEEEEEC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEeec
Confidence 566677778999999999999987666555
No 367
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=44.75 E-value=73 Score=24.62 Aligned_cols=32 Identities=16% Similarity=0.179 Sum_probs=25.8
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Q psy11104 15 TKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTV 46 (70)
Q Consensus 15 ~~V~~va~spdg~~LasGg~Dg~IklWdi~~~ 46 (70)
..-+.++|.|||.+|++--..|.|++++-.+.
T Consensus 30 ~~Pw~maflPDG~llVtER~~G~I~~v~~~~~ 61 (454)
T TIGR03606 30 NKPWALLWGPDNQLWVTERATGKILRVNPETG 61 (454)
T ss_pred CCceEEEEcCCCeEEEEEecCCEEEEEeCCCC
Confidence 45689999999999988655799999986544
No 368
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=44.49 E-value=92 Score=20.63 Aligned_cols=32 Identities=19% Similarity=0.116 Sum_probs=26.3
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCe
Q psy11104 16 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSL 48 (70)
Q Consensus 16 ~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~ 48 (70)
..-.+++.++|++.++....+.|.++|.+ ++.
T Consensus 185 ~pDG~~vD~~G~l~va~~~~~~I~~~~p~-G~~ 216 (246)
T PF08450_consen 185 YPDGLAVDSDGNLWVADWGGGRIVVFDPD-GKL 216 (246)
T ss_dssp EEEEEEEBTTS-EEEEEETTTEEEEEETT-SCE
T ss_pred CCCcceEcCCCCEEEEEcCCCEEEEECCC-ccE
Confidence 47789999999999998889999999977 443
No 369
>PRK13616 lipoprotein LpqB; Provisional
Probab=44.08 E-value=39 Score=26.72 Aligned_cols=26 Identities=12% Similarity=-0.005 Sum_probs=20.5
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEE
Q psy11104 14 NTKVNCLAWHQNQGWIAVGGDDGLLKV 40 (70)
Q Consensus 14 ~~~V~~va~spdg~~LasGg~Dg~Ikl 40 (70)
.+.|..+.|||||..||--. +|.|.+
T Consensus 447 ~g~Issl~wSpDG~RiA~i~-~g~v~V 472 (591)
T PRK13616 447 PGPISELQLSRDGVRAAMII-GGKVYL 472 (591)
T ss_pred CCCcCeEEECCCCCEEEEEE-CCEEEE
Confidence 45799999999999888755 466666
No 370
>PRK04043 tolB translocation protein TolB; Provisional
Probab=43.68 E-value=1.2e+02 Score=22.72 Aligned_cols=33 Identities=12% Similarity=-0.075 Sum_probs=23.4
Q ss_pred CeEEEEEcCCCCE-EEEEeCC---CcEEEEECCCCCe
Q psy11104 16 KVNCLAWHQNQGW-IAVGGDD---GLLKVLKLDTVSL 48 (70)
Q Consensus 16 ~V~~va~spdg~~-LasGg~D---g~IklWdi~~~~~ 48 (70)
....-.|+|||+. ++-.+.+ ..|.++|+.+++.
T Consensus 189 ~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~ 225 (419)
T PRK04043 189 LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKK 225 (419)
T ss_pred CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcE
Confidence 5678999999984 6643333 4688889877653
No 371
>PF05907 DUF866: Eukaryotic protein of unknown function (DUF866); InterPro: IPR008584 This family consists of a number of hypothetical eukaryotic proteins of unknown function with an average length of around 165 residues.; PDB: 1ZSO_B.
Probab=40.76 E-value=56 Score=21.61 Aligned_cols=29 Identities=21% Similarity=0.433 Sum_probs=15.5
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEE-EEECCC
Q psy11104 17 VNCLAWHQNQGWIAVGGDDGLLK-VLKLDT 45 (70)
Q Consensus 17 V~~va~spdg~~LasGg~Dg~Ik-lWdi~~ 45 (70)
+.-+.|+|++.+.|.+.+.|+.- =.|+..
T Consensus 105 ~e~~~f~p~~~~~~~~~esG~~f~~vdL~e 134 (161)
T PF05907_consen 105 LEPVEFSPRGGWVAVSVESGTKFEDVDLSE 134 (161)
T ss_dssp EEEEEE---S-EEEEET-TS-EEEEE--TT
T ss_pred cEeEEEecCCcEEEEEecCCCEEEeccCCC
Confidence 55788999999999998777654 445544
No 372
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=40.18 E-value=62 Score=22.79 Aligned_cols=30 Identities=23% Similarity=0.382 Sum_probs=22.0
Q ss_pred CCeEEEEEcCC-CCEEEEEeCCCcEEEEECC
Q psy11104 15 TKVNCLAWHQN-QGWIAVGGDDGLLKVLKLD 44 (70)
Q Consensus 15 ~~V~~va~spd-g~~LasGg~Dg~IklWdi~ 44 (70)
..+.+|+|+|+ +.++|...+++.|.-.+.+
T Consensus 22 ~e~SGLTy~pd~~tLfaV~d~~~~i~els~~ 52 (248)
T PF06977_consen 22 DELSGLTYNPDTGTLFAVQDEPGEIYELSLD 52 (248)
T ss_dssp S-EEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCccccEEcCCCCeEEEEECCCCEEEEEcCC
Confidence 35999999998 5567777777777666653
No 373
>TIGR02542 B_forsyth_147 Bacteroides forsythus 147-residue repeat. The longest predicted protein in Bacteroides forsythus ATCC 43037 is over 3000 residues long and lacks homology to other known proteins. Immediately after the signal sequence are four tandem repeats, approximately 147 residues long. This model describes that repeat. This model describes that repeat.
Probab=40.03 E-value=27 Score=22.96 Aligned_cols=35 Identities=17% Similarity=0.229 Sum_probs=23.5
Q ss_pred eCCCcEEEEECCCCCeEEEEEeccc-ccccccCCCCccC
Q psy11104 33 GDDGLLKVLKLDTVSLTIMIILFQE-RNLQDKLPPLMLT 70 (70)
Q Consensus 33 g~Dg~IklWdi~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 70 (70)
.-||.|+| .++..+.++...++ .+.++-|||.-||
T Consensus 52 ~vDg~i~I---Gs~q~~~sV~i~gTPsgnnv~F~PYTlT 87 (145)
T TIGR02542 52 QVDGNIRI---GSGQTPASVRIQGTPSGNNVIFPPYTLT 87 (145)
T ss_pred hccCcEEE---ccCCCcccEEEecCCCCCceecCceeee
Confidence 46777765 55555666665554 4778889998765
No 374
>COG4305 Endoglucanase C-terminal domain/subunit and related proteins [Carbohydrate transport and metabolism]
Probab=39.07 E-value=1.4e+02 Score=21.03 Aligned_cols=65 Identities=22% Similarity=0.228 Sum_probs=42.2
Q ss_pred EEeeeeeecCCCCCeEEEEEcCCCCEEEEEeCCCcE-EEEECCCCCeEEEEEecccccccccCCCCc
Q psy11104 3 IYLSKKIAIPNNTKVNCLAWHQNQGWIAVGGDDGLL-KVLKLDTVSLTIMIILFQERNLQDKLPPLM 68 (70)
Q Consensus 3 ~~~~~~I~~~~~~~V~~va~spdg~~LasGg~Dg~I-klWdi~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (70)
||.+-. ..+|.-+|..+.+-.||.++----.|=.- -==++.++...+++..-+-+.+.+.+|||-
T Consensus 149 WWAAIQ-VRnH~yPV~KlE~~qdg~WinlpK~dYNhFVgT~LG~~pL~~RmTDIRG~~l~DtlP~Lp 214 (232)
T COG4305 149 WWAAIQ-VRNHKYPVMKLEYEQDGKWINLPKMDYNHFVGTNLGTGPLKVRMTDIRGKVLKDTLPKLP 214 (232)
T ss_pred ceeeee-eecccCceEEEEEecCCeEeeccccccceeeccccCCCceEEEEeecccceeeccccccc
Confidence 444422 33689999999999988876544333110 011456666777777776778889999883
No 375
>KOG2467|consensus
Probab=38.94 E-value=27 Score=27.13 Aligned_cols=22 Identities=23% Similarity=0.299 Sum_probs=19.0
Q ss_pred CCCEEEEEeCCCcEEEEECCCC
Q psy11104 25 NQGWIAVGGDDGLLKVLKLDTV 46 (70)
Q Consensus 25 dg~~LasGg~Dg~IklWdi~~~ 46 (70)
-|-.|+|||.|+.+-+||++..
T Consensus 340 ~Gy~lvtgGTDnHlvLvDLr~~ 361 (477)
T KOG2467|consen 340 RGYKLVTGGTDNHLVLVDLRPK 361 (477)
T ss_pred cCceEecCCccceEEEEecccc
Confidence 3678999999999999998754
No 376
>TIGR02171 Fb_sc_TIGR02171 Fibrobacter succinogenes paralogous family TIGR02171. This model describes a paralogous family of the rumen bacterium Fibrobacter succinogenes. Eleven members are found in Fibrobacter succinogenes S85, averaging over 900 amino acids in length. More than half are predicted lipoproteins. The function is unknown.
Probab=37.12 E-value=47 Score=28.09 Aligned_cols=41 Identities=17% Similarity=0.213 Sum_probs=28.5
Q ss_pred eeeecCCCCCeEEEEEcCCCCEEEE-EeCCC-----cEEEEECCCCC
Q psy11104 7 KKIAIPNNTKVNCLAWHQNQGWIAV-GGDDG-----LLKVLKLDTVS 47 (70)
Q Consensus 7 ~~I~~~~~~~V~~va~spdg~~Las-Gg~Dg-----~IklWdi~~~~ 47 (70)
+.|+..++.+|.+=+|||||+.||= -|-++ .|.+=|+++..
T Consensus 342 ~~ve~~~~~~i~sP~~SPDG~~vAY~ts~e~~~g~s~vYv~~L~t~~ 388 (912)
T TIGR02171 342 RAVEIEDTISVYHPDISPDGKKVAFCTGIEGLPGKSSVYVRNLNASG 388 (912)
T ss_pred eEEEecCCCceecCcCCCCCCEEEEEEeecCCCCCceEEEEehhccC
Confidence 3455677888999999999999887 34333 36666665443
No 377
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=37.07 E-value=81 Score=21.75 Aligned_cols=28 Identities=18% Similarity=0.183 Sum_probs=20.8
Q ss_pred CeEEEEEcCCCCEEEEEe---CCCcEEEEEC
Q psy11104 16 KVNCLAWHQNQGWIAVGG---DDGLLKVLKL 43 (70)
Q Consensus 16 ~V~~va~spdg~~LasGg---~Dg~IklWdi 43 (70)
.|..+.+||||..+|--. .++.|.+=-+
T Consensus 113 ~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V 143 (253)
T PF10647_consen 113 RITALRVSPDGTRVAVVVEDGGGGRVYVAGV 143 (253)
T ss_pred ceEEEEECCCCcEEEEEEecCCCCeEEEEEE
Confidence 899999999998766544 4566666544
No 378
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=37.07 E-value=61 Score=24.75 Aligned_cols=30 Identities=20% Similarity=0.389 Sum_probs=20.0
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Q psy11104 16 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTV 46 (70)
Q Consensus 16 ~V~~va~spdg~~LasGg~Dg~IklWdi~~~ 46 (70)
.|..|-||++|+++|-.+.| ++.|.+...+
T Consensus 146 ~vk~V~Ws~~g~~val~t~~-~i~il~~~~~ 175 (443)
T PF04053_consen 146 AVKYVIWSDDGELVALVTKD-SIYILKYNLE 175 (443)
T ss_dssp E-EEEEE-TTSSEEEEE-S--SEEEEEE-HH
T ss_pred CCcEEEEECCCCEEEEEeCC-eEEEEEecch
Confidence 48999999999999998755 6777765443
No 379
>PF01011 PQQ: PQQ enzyme repeat family.; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....
Probab=36.83 E-value=56 Score=15.94 Aligned_cols=25 Identities=28% Similarity=0.294 Sum_probs=19.4
Q ss_pred EEEEeCCCcEEEEECCCCCeEEEEE
Q psy11104 29 IAVGGDDGLLKVLKLDTVSLTIMII 53 (70)
Q Consensus 29 LasGg~Dg~IklWdi~~~~~~~~~~ 53 (70)
+..++.||.+.-.|.++++..=...
T Consensus 3 v~~~~~~g~l~AlD~~TG~~~W~~~ 27 (38)
T PF01011_consen 3 VYVGTPDGYLYALDAKTGKVLWKFQ 27 (38)
T ss_dssp EEEETTTSEEEEEETTTTSEEEEEE
T ss_pred EEEeCCCCEEEEEECCCCCEEEeee
Confidence 4455899999999999998766543
No 380
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=36.17 E-value=86 Score=23.55 Aligned_cols=40 Identities=23% Similarity=0.255 Sum_probs=27.4
Q ss_pred CCeEEEEEcCCCC-EEE-EEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 15 TKVNCLAWHQNQG-WIA-VGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 15 ~~V~~va~spdg~-~La-sGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
.++.+|+.+.+.+ +|. ....|+.+.++|..+++..-++..
T Consensus 289 ~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~~ 330 (342)
T PF06433_consen 289 HPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRSIEQ 330 (342)
T ss_dssp EEESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEEEE--
T ss_pred CccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEeehhc
Confidence 3577999999854 554 445789999999999977665544
No 381
>KOG1920|consensus
Probab=36.06 E-value=64 Score=28.23 Aligned_cols=28 Identities=11% Similarity=0.285 Sum_probs=23.5
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy11104 15 TKVNCLAWHQNQGWIAVGGDDGLLKVLK 42 (70)
Q Consensus 15 ~~V~~va~spdg~~LasGg~Dg~IklWd 42 (70)
..|.+.+||||++++|-...++++-+-+
T Consensus 110 ~GI~aaswS~Dee~l~liT~~~tll~mT 137 (1265)
T KOG1920|consen 110 NGISAASWSPDEELLALITGRQTLLFMT 137 (1265)
T ss_pred CceEEEeecCCCcEEEEEeCCcEEEEEe
Confidence 4689999999999998888888876654
No 382
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=35.00 E-value=1e+02 Score=22.39 Aligned_cols=36 Identities=8% Similarity=0.184 Sum_probs=22.3
Q ss_pred eecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy11104 9 IAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLD 44 (70)
Q Consensus 9 I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~ 44 (70)
+..+-.+.++.+.-++||.++|.++......-||-.
T Consensus 139 ~~~~~~gs~~~~~r~~dG~~vavs~~G~~~~s~~~G 174 (302)
T PF14870_consen 139 VVSETSGSINDITRSSDGRYVAVSSRGNFYSSWDPG 174 (302)
T ss_dssp EE-S----EEEEEE-TTS-EEEEETTSSEEEEE-TT
T ss_pred cccCCcceeEeEEECCCCcEEEEECcccEEEEecCC
Confidence 344456779999999999999998777777788754
No 383
>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []. These proteins are found in fungi.
Probab=34.11 E-value=75 Score=25.65 Aligned_cols=29 Identities=17% Similarity=0.133 Sum_probs=25.8
Q ss_pred CCeEEEEEcCC-CCEEEEEeCCCcEEEEEC
Q psy11104 15 TKVNCLAWHQN-QGWIAVGGDDGLLKVLKL 43 (70)
Q Consensus 15 ~~V~~va~spd-g~~LasGg~Dg~IklWdi 43 (70)
.+.-.|+|||. ...||.-...|.-.||++
T Consensus 146 ~~~aDv~FnP~~~~q~AiVD~~G~Wsvw~i 175 (765)
T PF10214_consen 146 FPHADVAFNPWDQRQFAIVDEKGNWSVWDI 175 (765)
T ss_pred CccceEEeccCccceEEEEeccCcEEEEEe
Confidence 46678999997 678999999999999999
No 384
>PF08954 DUF1900: Domain of unknown function (DUF1900); InterPro: IPR015049 This domain is predominantly found in the structural protein coronin, and is duplicated in some sequences. It has no known function []. ; PDB: 2B4E_A 2AQ5_A.
Probab=33.87 E-value=1.1e+02 Score=19.73 Aligned_cols=39 Identities=13% Similarity=0.218 Sum_probs=21.4
Q ss_pred eecCCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEECCCCC
Q psy11104 9 IAIPNNTKVNCLAWHQNQG-WIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 9 I~~~~~~~V~~va~spdg~-~LasGg~Dg~IklWdi~~~~ 47 (70)
+....+..+.---|.+|.+ +..+|=.|++||.+.+..+.
T Consensus 5 ~~lD~s~g~L~P~yD~dt~llyl~gKGD~~ir~yEv~~~~ 44 (136)
T PF08954_consen 5 QELDTSSGVLMPFYDEDTNLLYLAGKGDGNIRYYEVSDES 44 (136)
T ss_dssp EE----SS-EEEEE-TTT-EEEEEETT-S-EEEEEE-SST
T ss_pred EeccCCCceeEeeEcCCCCEEEEEeccCcEEEEEEEcCCC
Confidence 3444456667777888855 45667789999999997773
No 385
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=33.87 E-value=1.3e+02 Score=24.08 Aligned_cols=35 Identities=14% Similarity=0.171 Sum_probs=28.0
Q ss_pred CCCCCeEEEEEcCCCCE--EEEEeCCCcEEEEECCCC
Q psy11104 12 PNNTKVNCLAWHQNQGW--IAVGGDDGLLKVLKLDTV 46 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~--LasGg~Dg~IklWdi~~~ 46 (70)
.-.++|...+|+|.+.. +++|..+-.+.++|+++.
T Consensus 272 ~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N 308 (561)
T COG5354 272 DLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN 308 (561)
T ss_pred cccccceeeeecccCCceeEEecccccceeecccccc
Confidence 34689999999998665 455668889999998876
No 386
>PLN02868 acyl-CoA thioesterase family protein
Probab=33.77 E-value=55 Score=24.17 Aligned_cols=22 Identities=5% Similarity=0.034 Sum_probs=14.9
Q ss_pred CeEEEEEcCCCCEEEEEeCCCc
Q psy11104 16 KVNCLAWHQNQGWIAVGGDDGL 37 (70)
Q Consensus 16 ~V~~va~spdg~~LasGg~Dg~ 37 (70)
-+.+==|+.+|+++||+..+|.
T Consensus 391 ~~~g~l~~~~G~LvAs~~Qe~l 412 (413)
T PLN02868 391 FATGHMFNRKGELVVSLTQEAL 412 (413)
T ss_pred eEEEEEECCCCCEEEEEEeeec
Confidence 3445557777777777777764
No 387
>COG3053 CitC Citrate lyase synthetase [Energy production and conversion]
Probab=33.73 E-value=60 Score=24.48 Aligned_cols=29 Identities=21% Similarity=0.291 Sum_probs=21.9
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCc-EEEE
Q psy11104 13 NNTKVNCLAWHQNQGWIAVGGDDGL-LKVL 41 (70)
Q Consensus 13 ~~~~V~~va~spdg~~LasGg~Dg~-IklW 41 (70)
..-...+..+.-|++.+||||--|. ||--
T Consensus 33 ~~ve~~v~~~~~~~~iiacGsiaGnvikcv 62 (352)
T COG3053 33 TTVEYFVAIYRDNEEIIACGSIAGNVIKCV 62 (352)
T ss_pred ccceEEEEEEcCCCcEEEecccccceeEEE
Confidence 3446778889888999999998874 4433
No 388
>PF10584 Proteasome_A_N: Proteasome subunit A N-terminal signature; InterPro: IPR000426 The proteasome (or macropain) (3.4.25.1 from EC) [, , , , ] is a eukaryotic and archaeal multicatalytic proteinase complex that seems to be involved in an ATP/ubiquitin-dependent nonlysosomal proteolytic pathway. In eukaryotes the proteasome is composed of about 28 distinct subunits which form a highly ordered ring-shaped structure (20S ring) of about 700 kDa. Most proteasome subunits can be classified, on the basis on sequence similarities into two groups, alpha (A) and beta (B). This family contains the alpha subunit sequences which range from 210 to 290 amino acids. These sequences are classified as non-peptidase homologues in MEROPS peptidase family T1 (clan PB(T)). ; GO: 0004175 endopeptidase activity, 0006511 ubiquitin-dependent protein catabolic process, 0019773 proteasome core complex, alpha-subunit complex; PDB: 3H4P_M 1IRU_O 3UN4_U 1FNT_A 3OEV_G 3OEU_U 3SDK_U 3DY3_G 3MG7_G 3L5Q_C ....
Probab=33.68 E-value=17 Score=17.00 Aligned_cols=7 Identities=0% Similarity=0.131 Sum_probs=5.6
Q ss_pred EcCCCCE
Q psy11104 22 WHQNQGW 28 (70)
Q Consensus 22 ~spdg~~ 28 (70)
|||+|++
T Consensus 8 FSp~Grl 14 (23)
T PF10584_consen 8 FSPDGRL 14 (23)
T ss_dssp BBTTSSB
T ss_pred ECCCCeE
Confidence 8898875
No 389
>PF11164 DUF2948: Protein of unknown function (DUF2948); InterPro: IPR021335 This family of proteins with unknown function appear to be restricted to Proteobacteria.
Probab=33.66 E-value=1e+02 Score=20.33 Aligned_cols=35 Identities=9% Similarity=0.158 Sum_probs=23.7
Q ss_pred eeeeecCCCCC---eEEEEEcC----CCCEEEEEeCCCcEEE
Q psy11104 6 SKKIAIPNNTK---VNCLAWHQ----NQGWIAVGGDDGLLKV 40 (70)
Q Consensus 6 ~~~I~~~~~~~---V~~va~sp----dg~~LasGg~Dg~Ikl 40 (70)
++.|....... +.+|.|.| .|....+-+.||.|++
T Consensus 73 s~gi~~~~~d~vLsLLai~fe~~e~p~G~v~L~fAGgg~IrL 114 (138)
T PF11164_consen 73 SRGIDRKDPDAVLSLLAITFEPGEAPAGHVLLTFAGGGAIRL 114 (138)
T ss_pred ecCCCCCCCCceEEEEEEEEEeCCCCCcEEEEEECCCcEEEE
Confidence 34455544443 45788876 5777778788898887
No 390
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=32.63 E-value=77 Score=23.75 Aligned_cols=30 Identities=20% Similarity=0.307 Sum_probs=24.7
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy11104 16 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDT 45 (70)
Q Consensus 16 ~V~~va~spdg~~LasGg~Dg~IklWdi~~ 45 (70)
.|..++|.++..-||.|-..|.|-||....
T Consensus 3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~ 32 (395)
T PF08596_consen 3 SVTHVSFAPETLELAVGLESGEVVLFKFGK 32 (395)
T ss_dssp -EEEEEEETTTTEEEEEETTS-EEEEEEEE
T ss_pred eEEEEEecCCCceEEEEccCCcEEEEEccc
Confidence 588999999988899999999999997644
No 391
>PF10395 Utp8: Utp8 family; InterPro: IPR018843 Utp8 is an essential component of the nuclear tRNA export machinery in Saccharomyces cerevisiae (Baker's yeast). It is a tRNA binding protein that acts at a step between tRNA maturation /aminoacylation, and translocation of the tRNA across the nuclear pore complex [].
Probab=32.18 E-value=1.3e+02 Score=24.62 Aligned_cols=31 Identities=16% Similarity=0.283 Sum_probs=28.5
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy11104 14 NTKVNCLAWHQNQGWIAVGGDDGLLKVLKLD 44 (70)
Q Consensus 14 ~~~V~~va~spdg~~LasGg~Dg~IklWdi~ 44 (70)
.+.|-.|.|.++++.+...-+.|.|.+||..
T Consensus 129 ~~kvv~Ik~~~~~~~I~vvl~nG~i~~~d~~ 159 (670)
T PF10395_consen 129 DDKVVGIKFSSDGKIIYVVLENGSIQIYDFS 159 (670)
T ss_pred ccceEEEEEecCCCEEEEEEcCCcEEEEecc
Confidence 5788999999999999999999999999993
No 392
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=32.11 E-value=1.3e+02 Score=22.69 Aligned_cols=34 Identities=6% Similarity=0.088 Sum_probs=24.9
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCC-cEEEEECCCC
Q psy11104 13 NNTKVNCLAWHQNQGWIAVGGDDG-LLKVLKLDTV 46 (70)
Q Consensus 13 ~~~~V~~va~spdg~~LasGg~Dg-~IklWdi~~~ 46 (70)
+...-+...|+|.|++|+..++|. .|.++.++..
T Consensus 289 eg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d~~ 323 (346)
T COG2706 289 EGQFPRDFNINPSGRFLIAANQKSDNITVFERDKE 323 (346)
T ss_pred CCcCCccceeCCCCCEEEEEccCCCcEEEEEEcCC
Confidence 344467888999999988877665 7888875443
No 393
>KOG2114|consensus
Probab=32.04 E-value=1.1e+02 Score=26.10 Aligned_cols=38 Identities=26% Similarity=0.253 Sum_probs=30.6
Q ss_pred eeeeeecC-CCCCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy11104 5 LSKKIAIP-NNTKVNCLAWHQNQGWIAVGGDDGLLKVLK 42 (70)
Q Consensus 5 ~~~~I~~~-~~~~V~~va~spdg~~LasGg~Dg~IklWd 42 (70)
+...+.+| +..++.+++.|.+-+.+|+|=.||+|....
T Consensus 115 ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~ 153 (933)
T KOG2114|consen 115 RIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYK 153 (933)
T ss_pred eeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEc
Confidence 33445565 567888999999999999999999998884
No 394
>KOG4649|consensus
Probab=31.91 E-value=67 Score=24.07 Aligned_cols=21 Identities=33% Similarity=0.593 Sum_probs=17.7
Q ss_pred CCEEEEEeCCCcEEEEECCCC
Q psy11104 26 QGWIAVGGDDGLLKVLKLDTV 46 (70)
Q Consensus 26 g~~LasGg~Dg~IklWdi~~~ 46 (70)
+..|..|+.|.+++-||+.+.
T Consensus 333 ~grl~igcRDdYv~cldl~~~ 353 (354)
T KOG4649|consen 333 DGRLLIGCRDDYVRCLDLDTW 353 (354)
T ss_pred ccEEEEEEccCeEEEEecccc
Confidence 456788899999999999875
No 395
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=31.08 E-value=2.2e+02 Score=21.55 Aligned_cols=33 Identities=12% Similarity=0.246 Sum_probs=26.0
Q ss_pred CCCeEEEEEcCCCCEEEE-EeCCCcEEEEECCCC
Q psy11104 14 NTKVNCLAWHQNQGWIAV-GGDDGLLKVLKLDTV 46 (70)
Q Consensus 14 ~~~V~~va~spdg~~Las-Gg~Dg~IklWdi~~~ 46 (70)
+..-+-|.|||++++.-. +=-+++|-+|.+...
T Consensus 190 G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~ 223 (346)
T COG2706 190 GAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPA 223 (346)
T ss_pred CCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCC
Confidence 445689999999998544 456889999998775
No 396
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=30.59 E-value=63 Score=24.67 Aligned_cols=26 Identities=23% Similarity=0.391 Sum_probs=18.0
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy11104 16 KVNCLAWHQNQGWIAVGGDDGLLKVLK 42 (70)
Q Consensus 16 ~V~~va~spdg~~LasGg~Dg~IklWd 42 (70)
....+++||+|++++.++ ||.-.|+.
T Consensus 34 ~p~~ls~npngr~v~V~g-~geY~iyt 59 (443)
T PF04053_consen 34 YPQSLSHNPNGRFVLVCG-DGEYEIYT 59 (443)
T ss_dssp --SEEEE-TTSSEEEEEE-TTEEEEEE
T ss_pred CCeeEEECCCCCEEEEEc-CCEEEEEE
Confidence 468999999999998855 55555655
No 397
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=30.09 E-value=1.1e+02 Score=22.16 Aligned_cols=22 Identities=32% Similarity=0.374 Sum_probs=16.0
Q ss_pred CeEEEEEcCCCCEEEEEeCCCc
Q psy11104 16 KVNCLAWHQNQGWIAVGGDDGL 37 (70)
Q Consensus 16 ~V~~va~spdg~~LasGg~Dg~ 37 (70)
.+..++|.++++..|+|+....
T Consensus 234 ~~ld~a~~~~~~~wa~gg~G~l 255 (302)
T PF14870_consen 234 GILDLAYRPPNEIWAVGGSGTL 255 (302)
T ss_dssp -EEEEEESSSS-EEEEESTT-E
T ss_pred eeEEEEecCCCCEEEEeCCccE
Confidence 4889999999999998775543
No 398
>PF00843 Arena_nucleocap: Arenavirus nucleocapsid protein; InterPro: IPR000229 Arenaviruses are single stranded RNA viruses. The arenavirus S RNAs that have been characterised include conserved terminal sequences, an ambisense arrangement of the coding regions for the precursor glycoprotein (GPC) and nucleocapsid (N) proteins and an intergenic region capable of forming a base-paired "hairpin" structure. The mature glycoproteins that result are G1 and G2 and the N protein []. This family represents the nucleocapsid protein that encapsulates the viral ssRNA [].; GO: 0019013 viral nucleocapsid; PDB: 3MX5_A 3MX2_C 3MWT_C 3Q7C_A 3MWP_B 3Q7B_A 3T5Q_E 3T5N_A 3R3L_B.
Probab=29.90 E-value=20 Score=28.26 Aligned_cols=17 Identities=29% Similarity=0.626 Sum_probs=9.6
Q ss_pred EEeCCCcEEEEECCCCC
Q psy11104 31 VGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 31 sGg~Dg~IklWdi~~~~ 47 (70)
-++.+|.||+||++...
T Consensus 147 ~~~~~GVVrvWDvkd~~ 163 (533)
T PF00843_consen 147 RGGRNGVVRVWDVKDPS 163 (533)
T ss_dssp ---SSSEE-SEE-S-GG
T ss_pred CCCCCCeEEEEecCCHH
Confidence 35789999999998754
No 399
>KOG2314|consensus
Probab=29.89 E-value=64 Score=26.30 Aligned_cols=32 Identities=19% Similarity=0.350 Sum_probs=26.1
Q ss_pred CCCeEEEEEcCCCCEEEEE---eCCCcEEEEECCC
Q psy11104 14 NTKVNCLAWHQNQGWIAVG---GDDGLLKVLKLDT 45 (70)
Q Consensus 14 ~~~V~~va~spdg~~LasG---g~Dg~IklWdi~~ 45 (70)
....+.|.|+|-|++++.+ |..|.+.+.|...
T Consensus 492 k~~~N~vfwsPkG~fvvva~l~s~~g~l~F~D~~~ 526 (698)
T KOG2314|consen 492 KKFANTVFWSPKGRFVVVAALVSRRGDLEFYDTDY 526 (698)
T ss_pred ccccceEEEcCCCcEEEEEEecccccceEEEecch
Confidence 3567899999999998776 5678899998764
No 400
>KOG2109|consensus
Probab=29.68 E-value=71 Score=26.52 Aligned_cols=39 Identities=13% Similarity=0.332 Sum_probs=30.4
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCC-cEEEEECCCCCeEE
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDG-LLKVLKLDTVSLTI 50 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg-~IklWdi~~~~~~~ 50 (70)
+|..++..++|.++|.++++.+-.| .|.++.+....+.+
T Consensus 313 AhkspiSaLcfdqsgsllViasi~g~nVnvfRimet~~t~ 352 (788)
T KOG2109|consen 313 AHKSPISALCFDQSGSLLVIASITGRNVNVFRIMETVCTV 352 (788)
T ss_pred eecCcccccccccCceEEEEEeeccceeeeEEeccccccc
Confidence 6889999999999999999888666 56666665554444
No 401
>smart00135 LY Low-density lipoprotein-receptor YWTD domain. Type "B" repeats in low-density lipoprotein (LDL) receptor that plays a central role in mammalian cholesterol metabolism. Also present in a variety of molecules similar to gp300/megalin.
Probab=29.14 E-value=72 Score=14.89 Aligned_cols=34 Identities=21% Similarity=0.116 Sum_probs=21.2
Q ss_pred CCCCeEEEEEcCCCCEEE-EEeCCCcEEEEECCCC
Q psy11104 13 NNTKVNCLAWHQNQGWIA-VGGDDGLLKVLKLDTV 46 (70)
Q Consensus 13 ~~~~V~~va~spdg~~La-sGg~Dg~IklWdi~~~ 46 (70)
.-..+++++|+|.++.|- +-...+.|...++.+.
T Consensus 7 ~~~~~~~la~d~~~~~lYw~D~~~~~I~~~~~~g~ 41 (43)
T smart00135 7 GLGHPNGLAVDWIEGRLYWTDWGLDVIEVANLDGT 41 (43)
T ss_pred CCCCcCEEEEeecCCEEEEEeCCCCEEEEEeCCCC
Confidence 345568899999866543 4444456666665543
No 402
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=28.72 E-value=1.5e+02 Score=22.72 Aligned_cols=29 Identities=17% Similarity=0.249 Sum_probs=22.5
Q ss_pred CCeEEEEEc-----------CCCCEEEEEeCCCcEEEEEC
Q psy11104 15 TKVNCLAWH-----------QNQGWIAVGGDDGLLKVLKL 43 (70)
Q Consensus 15 ~~V~~va~s-----------pdg~~LasGg~Dg~IklWdi 43 (70)
..|+++.|= ||...||.|-.+|.|+++..
T Consensus 57 e~ITsi~clpl~s~~~s~~~~dw~~I~VG~ssG~vrfyte 96 (415)
T PF14655_consen 57 ECITSILCLPLSSQKRSTGGPDWTCIAVGTSSGYVRFYTE 96 (415)
T ss_pred CEEEEEEEEEeecccccCCCCCcEEEEEEecccEEEEEec
Confidence 566666654 34678999999999999985
No 403
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=28.27 E-value=1e+02 Score=18.46 Aligned_cols=17 Identities=18% Similarity=0.266 Sum_probs=12.1
Q ss_pred CeEEEEEcCCCCEEEEE
Q psy11104 16 KVNCLAWHQNQGWIAVG 32 (70)
Q Consensus 16 ~V~~va~spdg~~LasG 32 (70)
.-+.|+.+||+.+++.+
T Consensus 58 fpNGVals~d~~~vlv~ 74 (89)
T PF03088_consen 58 FPNGVALSPDESFVLVA 74 (89)
T ss_dssp SEEEEEE-TTSSEEEEE
T ss_pred ccCeEEEcCCCCEEEEE
Confidence 45889999998876653
No 404
>PF07865 DUF1652: Protein of unknown function (DUF1652); InterPro: IPR012448 The proteins in this entry have not been characterised.
Probab=28.25 E-value=1.3e+02 Score=17.45 Aligned_cols=33 Identities=9% Similarity=0.110 Sum_probs=21.0
Q ss_pred EEcCCCCEEEEEeCCC--cEEEEECCCCCeEEEEEe
Q psy11104 21 AWHQNQGWIAVGGDDG--LLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 21 a~spdg~~LasGg~Dg--~IklWdi~~~~~~~~~~~ 54 (70)
+|.|.. --++-..|+ +|||+|-.+++..+.+..
T Consensus 11 aflPl~-C~ct~~~~~smtvrl~d~~sg~~~l~vtG 45 (69)
T PF07865_consen 11 AFLPLR-CECTIAPDGSMTVRLFDPASGRVELTVTG 45 (69)
T ss_pred cCCCce-eEEEECCCCcEEEEEecCCCCcEEEEEcC
Confidence 455552 223334444 799999999988776554
No 405
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=27.31 E-value=1.6e+02 Score=22.45 Aligned_cols=22 Identities=23% Similarity=0.348 Sum_probs=18.3
Q ss_pred CCEEEEEeCCCcEEEEECCCCC
Q psy11104 26 QGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 26 g~~LasGg~Dg~IklWdi~~~~ 47 (70)
...|+.||.+|.+||++.....
T Consensus 37 ~d~IivGS~~G~LrIy~P~~~~ 58 (418)
T PF14727_consen 37 SDKIIVGSYSGILRIYDPSGNE 58 (418)
T ss_pred ccEEEEeccccEEEEEccCCCC
Confidence 4689999999999999975443
No 406
>PRK10115 protease 2; Provisional
Probab=26.18 E-value=1.2e+02 Score=24.33 Aligned_cols=32 Identities=13% Similarity=0.135 Sum_probs=23.1
Q ss_pred CeEEEEEcCCCCEEEEEe-----CCCcEEEEECCCCC
Q psy11104 16 KVNCLAWHQNQGWIAVGG-----DDGLLKVLKLDTVS 47 (70)
Q Consensus 16 ~V~~va~spdg~~LasGg-----~Dg~IklWdi~~~~ 47 (70)
.+..+.|||||++||-+- +.-.|++-|+.++.
T Consensus 128 ~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~ 164 (686)
T PRK10115 128 TLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGN 164 (686)
T ss_pred EEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCC
Confidence 367789999999888753 22357788887665
No 407
>KOG0882|consensus
Probab=26.02 E-value=1.1e+02 Score=24.37 Aligned_cols=34 Identities=9% Similarity=0.056 Sum_probs=30.8
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDT 45 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~ 45 (70)
-|.++|.++-++|-+.-+.|....|.|.-|....
T Consensus 142 lH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~ 175 (558)
T KOG0882|consen 142 LHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEG 175 (558)
T ss_pred cccCceEEEEeeccccceeeccccceeEeecCCC
Confidence 4789999999999999999999999999998663
No 408
>cd00556 Thioesterase_II Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) domains, respectively. TEII has two tandem asymmetric hot dog folds that are structurally similar to one found in PaaI thioesterase, 4-hydroxybenzoyl-CoA thioesterase (4HBT) and beta-hydroxydecanoyl-ACP dehydratase and thus, the TEII monomer is equivalent to the homodimeric form of the latter three enzymes. Human TEII is expressed in T cells and has been shown to bind the product of the HIV-1 Nef gene.
Probab=26.00 E-value=88 Score=17.41 Aligned_cols=15 Identities=13% Similarity=0.187 Sum_probs=6.9
Q ss_pred EEEEcCCCCEEEEEe
Q psy11104 19 CLAWHQNQGWIAVGG 33 (70)
Q Consensus 19 ~va~spdg~~LasGg 33 (70)
+-.|+++|+++|++.
T Consensus 80 ~~i~~~~G~lva~~~ 94 (99)
T cd00556 80 GRAYQRDGKLVASAT 94 (99)
T ss_pred EEEECCCCcEEEEEE
Confidence 333444455555543
No 409
>PF12566 DUF3748: Protein of unknown function (DUF3748); InterPro: IPR022223 This domain family is found in bacteria and eukaryotes, and is approximately 120 amino acids in length.
Probab=25.85 E-value=68 Score=20.83 Aligned_cols=22 Identities=14% Similarity=0.475 Sum_probs=17.8
Q ss_pred EEcCCCCEEEEEeCCCcEEEEE
Q psy11104 21 AWHQNQGWIAVGGDDGLLKVLK 42 (70)
Q Consensus 21 a~spdg~~LasGg~Dg~IklWd 42 (70)
.|||||++|..-..|..+.=.|
T Consensus 74 vfSpDG~~lSFTYNDhVmhe~d 95 (122)
T PF12566_consen 74 VFSPDGSWLSFTYNDHVMHELD 95 (122)
T ss_pred EECCCCCEEEEEecchhhcccc
Confidence 5999999999988888765444
No 410
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=25.51 E-value=1.7e+02 Score=22.64 Aligned_cols=30 Identities=13% Similarity=0.062 Sum_probs=24.0
Q ss_pred CCCEEEEEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 25 NQGWIAVGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 25 dg~~LasGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
.+.++..|+.||.++.+|.++++..-....
T Consensus 471 ~g~lvf~g~~~G~l~a~D~~TGe~lw~~~~ 500 (527)
T TIGR03075 471 AGDLVFYGTLEGYFKAFDAKTGEELWKFKT 500 (527)
T ss_pred CCcEEEEECCCCeEEEEECCCCCEeEEEeC
Confidence 345677788899999999999998776544
No 411
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=24.91 E-value=2.6e+02 Score=20.95 Aligned_cols=50 Identities=12% Similarity=0.256 Sum_probs=33.4
Q ss_pred CeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCCeEEEEEecccccccccCC
Q psy11104 16 KVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTVSLTIMIILFQERNLQDKLP 65 (70)
Q Consensus 16 ~V~~va~spd-g~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~~~~~~~~ 65 (70)
.|.++.|++. +.+|+=+.+++.+---|....-........+..++..+.|
T Consensus 234 DvSgl~~~~~~~~LLVLS~ESr~l~Evd~~G~~~~~lsL~~g~~gL~~dip 284 (316)
T COG3204 234 DVSGLEFNAITNSLLVLSDESRRLLEVDLSGEVIELLSLTKGNHGLSSDIP 284 (316)
T ss_pred ccccceecCCCCcEEEEecCCceEEEEecCCCeeeeEEeccCCCCCcccCC
Confidence 4778899987 7788888899988888877664333333333445555444
No 412
>KOG4305|consensus
Probab=24.71 E-value=1.9e+02 Score=24.93 Aligned_cols=44 Identities=20% Similarity=0.125 Sum_probs=26.8
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEeccccccccc
Q psy11104 16 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQERNLQDK 63 (70)
Q Consensus 16 ~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~~~~~~ 63 (70)
+..+..++| .+||- +|..|.|||+++++..-.+..+.=+-+...
T Consensus 955 p~~~a~~~~--yiia~--~~~fIeI~~~~t~eli~~i~~~~Ir~~~~~ 998 (1029)
T KOG4305|consen 955 PQEFALSYP--YIIAF--GDNFIEIRDLETGELIQIILGQNIRLLTSG 998 (1029)
T ss_pred cceeeeecc--eEEEe--cCceEEEEecccceeeEEeeccceeEeecC
Confidence 344444443 33444 388999999999987765555444444443
No 413
>KOG4649|consensus
Probab=24.39 E-value=1.3e+02 Score=22.59 Aligned_cols=29 Identities=24% Similarity=0.269 Sum_probs=24.5
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCCCeEEE
Q psy11104 23 HQNQGWIAVGGDDGLLKVLKLDTVSLTIM 51 (70)
Q Consensus 23 spdg~~LasGg~Dg~IklWdi~~~~~~~~ 51 (70)
.+++.+|-+|+.|+....-|+++......
T Consensus 102 d~~~glIycgshd~~~yalD~~~~~cVyk 130 (354)
T KOG4649|consen 102 DFDGGLIYCGSHDGNFYALDPKTYGCVYK 130 (354)
T ss_pred cCCCceEEEecCCCcEEEecccccceEEe
Confidence 46899999999999999999888776554
No 414
>KOG3620|consensus
Probab=24.07 E-value=96 Score=27.67 Aligned_cols=37 Identities=19% Similarity=0.302 Sum_probs=30.8
Q ss_pred eeecCCCCCeEEEEEcCC-CC---EEEEEeCCCcEEEEECC
Q psy11104 8 KIAIPNNTKVNCLAWHQN-QG---WIAVGGDDGLLKVLKLD 44 (70)
Q Consensus 8 ~I~~~~~~~V~~va~spd-g~---~LasGg~Dg~IklWdi~ 44 (70)
+|.+||..+..-+..-.. |+ -|-||+..|.-++|++.
T Consensus 106 ~i~NPh~~plqi~EiysSGG~~hlELPsg~~egp~~lW~Ip 146 (1626)
T KOG3620|consen 106 HIYNPHERPLQILEIYSSGGEFHLELPSGGSEGPQNLWKIP 146 (1626)
T ss_pred EecCCccCceEEEEEeccCccEEEecCCCCCcCcccccccC
Confidence 677899999888888776 44 37899999999999985
No 415
>PF00519 PPV_E1_C: Papillomavirus helicase; InterPro: IPR001177 Papillomaviruses are a large family of DNA tumour viruses which give rise to warts in their host species. The helicase E1 protein is an ATP-dependent DNA helicase required for initiation of viral DNA replication []. It forms a complex with the viral E2 protein, which is a site-specific DNA-binding transcriptional activator. The E1-E2 complex binds to the replication origin which contains binding sites for both proteins []. The E1 protein is a 70 kDa polypeptide with a central DNA-binding domain and a C-terminal ATPase/helicase domain. It binds specific 18 bp DNA sequences at the origin of replication, melts the DNA duplex and functions as a 3' to 5' helicase []. In addition to E2 it also interacts with DNA polymerase alpha and replication protein A to effect DNA replication. The DNA-binding domain forms a five-stranded antiparallel beta sheet bordered by four loosely packed alpha helices on one side and two tightly packed helices on the other []. Two structural modules within this domain, an extended loop and a helix, contain conserved residues and are critical for DNA binding. In solution E1 is a monomer, but binds DNA as a dimer. Recruitment of more E1 subunits to the complex leads to melting of the origin and ultimately to the formation of an E1 hexamer with helicase activity []. The entry represents the C-terminal region of E1, containing both the DNA-binding and ATPase/helical domains.; GO: 0003677 DNA binding, 0004003 ATP-dependent DNA helicase activity, 0005524 ATP binding, 0006260 DNA replication; PDB: 1TUE_K 1R9W_A 2V9P_B 2GXA_I 1KSX_J 1KSY_A 1F08_B.
Probab=23.70 E-value=34 Score=26.51 Aligned_cols=23 Identities=30% Similarity=0.361 Sum_probs=16.0
Q ss_pred eEEEEEecccccccccCCCCccC
Q psy11104 48 LTIMIILFQERNLQDKLPPLMLT 70 (70)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~ 70 (70)
.++.+...|-+-++.+.|||.+|
T Consensus 335 N~vsiD~KHkap~Qik~PPLlIT 357 (432)
T PF00519_consen 335 NPVSIDCKHKAPVQIKCPPLLIT 357 (432)
T ss_dssp SEEEEEESSSEEEEEE---EEEE
T ss_pred CeeeeeccCCCceEeecCceEEe
Confidence 57777777778899999999875
No 416
>PF08149 BING4CT: BING4CT (NUC141) domain; InterPro: IPR012952 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This C-terminal domain is found in the BING4 family of nucleolar WD40 repeat proteins [].
Probab=23.39 E-value=1.2e+02 Score=18.28 Aligned_cols=29 Identities=17% Similarity=0.367 Sum_probs=24.2
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEE
Q psy11104 13 NNTKVNCLAWHQNQGWIAVGGDDGLLKVL 41 (70)
Q Consensus 13 ~~~~V~~va~spdg~~LasGg~Dg~IklW 41 (70)
.++.|.++.|-|-...|+.|...|.-.+-
T Consensus 8 ~~~~v~~~~F~PfEDvLgvGh~~G~sSii 36 (80)
T PF08149_consen 8 PGSPVESLRFCPFEDVLGVGHSKGFSSII 36 (80)
T ss_pred CCCeeeeeEEechHHeeEeeccCceeEEe
Confidence 36789999999999999999988865554
No 417
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=22.96 E-value=1.8e+02 Score=23.62 Aligned_cols=31 Identities=13% Similarity=0.181 Sum_probs=26.7
Q ss_pred CCCCCeEEEEEc--CCCCEEEEEeCCCcEEEEE
Q psy11104 12 PNNTKVNCLAWH--QNQGWIAVGGDDGLLKVLK 42 (70)
Q Consensus 12 ~~~~~V~~va~s--pdg~~LasGg~Dg~IklWd 42 (70)
+..+.|..++|. |||+.+.+-|-+..|.++.
T Consensus 70 ~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~ 102 (631)
T PF12234_consen 70 SEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYT 102 (631)
T ss_pred cCCCceeeceeeecCCCCEEEEEEcCcEEEEEE
Confidence 557889999996 5799999999999999985
No 418
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=22.93 E-value=2.1e+02 Score=21.65 Aligned_cols=29 Identities=14% Similarity=0.214 Sum_probs=20.2
Q ss_pred EEEEcCCCCEEEEEeC-CCc--EEEEECCCCC
Q psy11104 19 CLAWHQNQGWIAVGGD-DGL--LKVLKLDTVS 47 (70)
Q Consensus 19 ~va~spdg~~LasGg~-Dg~--IklWdi~~~~ 47 (70)
+-.|||||.+|+..+. +|. |-+.|+.++.
T Consensus 330 ~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~ 361 (425)
T COG0823 330 NPVWSPDGDKIVFESSSGGQWDIDKNDLASGG 361 (425)
T ss_pred CccCCCCCCEEEEEeccCCceeeEEeccCCCC
Confidence 6679999999888764 344 5556665555
No 419
>smart00612 Kelch Kelch domain.
Probab=22.50 E-value=1e+02 Score=14.44 Aligned_cols=13 Identities=23% Similarity=0.192 Sum_probs=7.7
Q ss_pred cEEEEECCCCCeE
Q psy11104 37 LLKVLKLDTVSLT 49 (70)
Q Consensus 37 ~IklWdi~~~~~~ 49 (70)
.+.+||.+++++.
T Consensus 16 ~v~~yd~~~~~W~ 28 (47)
T smart00612 16 SVEVYDPETNKWT 28 (47)
T ss_pred eEEEECCCCCeEc
Confidence 4556666666653
No 420
>PF14326 DUF4384: Domain of unknown function (DUF4384)
Probab=22.49 E-value=1.6e+02 Score=16.72 Aligned_cols=27 Identities=15% Similarity=0.214 Sum_probs=17.3
Q ss_pred EEEEeCCCcEEEEECCCCCeEEEEEec
Q psy11104 29 IAVGGDDGLLKVLKLDTVSLTIMIILF 55 (70)
Q Consensus 29 LasGg~Dg~IklWdi~~~~~~~~~~~~ 55 (70)
-++...|+.++|.++..+.....+.-.
T Consensus 12 ~~~~~~~~Yl~l~~~~~~G~v~~L~Pn 38 (83)
T PF14326_consen 12 RVTSNRDGYLYLFYIDADGKVTLLFPN 38 (83)
T ss_pred EEEeCCCeEEEEEEECCCCCEEEEecC
Confidence 445577777777777666666555543
No 421
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=22.45 E-value=1.2e+02 Score=23.16 Aligned_cols=24 Identities=13% Similarity=0.237 Sum_probs=13.6
Q ss_pred EEEEcCCCCEE-EEEeCCCcEEEEE
Q psy11104 19 CLAWHQNQGWI-AVGGDDGLLKVLK 42 (70)
Q Consensus 19 ~va~spdg~~L-asGg~Dg~IklWd 42 (70)
-..|+|||+++ .+....|...|+=
T Consensus 355 hp~FSPDgk~VlF~Sd~~G~~~vY~ 379 (386)
T PF14583_consen 355 HPSFSPDGKWVLFRSDMEGPPAVYL 379 (386)
T ss_dssp --EE-TTSSEEEEEE-TTSS-EEEE
T ss_pred CCccCCCCCEEEEECCCCCCccEEE
Confidence 46899999874 5556677766653
No 422
>KOG2444|consensus
Probab=22.40 E-value=1.4e+02 Score=21.42 Aligned_cols=30 Identities=13% Similarity=0.197 Sum_probs=22.2
Q ss_pred CCCEEEEEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 25 NQGWIAVGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 25 dg~~LasGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
++.+..+|+.||.||.|+++-.+.......
T Consensus 113 ~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~ 142 (238)
T KOG2444|consen 113 DSSLGCVGAQDGRIRACNIKPNKVLGYVGQ 142 (238)
T ss_pred ccceeEEeccCCceeeeccccCceeeeecc
Confidence 355788889999999999877665554433
No 423
>PF11396 DUF2874: Protein of unknown function (DUF2874); InterPro: IPR021533 This bacterial family of proteins are probable periplasmic proteins with unknown function. There are between one and four copies of this domain per sequence. ; PDB: 3DUE_A 3U1W_B 3DB7_A 4DSD_A 3ELG_A.
Probab=22.24 E-value=1e+02 Score=16.16 Aligned_cols=17 Identities=12% Similarity=0.358 Sum_probs=10.1
Q ss_pred CCCCeEEEEEcCCCCEE
Q psy11104 13 NNTKVNCLAWHQNQGWI 29 (70)
Q Consensus 13 ~~~~V~~va~spdg~~L 29 (70)
.++.-..|-|+++|++|
T Consensus 45 ~~~~~~~v~fd~~G~~l 61 (61)
T PF11396_consen 45 KGGNEYEVYFDANGNWL 61 (61)
T ss_dssp ETTTSEEEEEETTS-EE
T ss_pred EeCCeEEEEEcCCCCCC
Confidence 44555667777777664
No 424
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=22.04 E-value=2.1e+02 Score=21.56 Aligned_cols=29 Identities=14% Similarity=0.164 Sum_probs=23.3
Q ss_pred CCCEEEEEeCCCcEEEEECCCCCeEEEEE
Q psy11104 25 NQGWIAVGGDDGLLKVLKLDTVSLTIMII 53 (70)
Q Consensus 25 dg~~LasGg~Dg~IklWdi~~~~~~~~~~ 53 (70)
.+..|..|+.||.++-+|.+++++.-+..
T Consensus 405 ~g~~v~~g~~dG~l~ald~~tG~~lW~~~ 433 (488)
T cd00216 405 AGNLVFAGAADGYFRAFDATTGKELWKFR 433 (488)
T ss_pred cCCeEEEECCCCeEEEEECCCCceeeEEE
Confidence 35678888999999999999988666543
No 425
>PHA02713 hypothetical protein; Provisional
Probab=22.04 E-value=88 Score=24.24 Aligned_cols=29 Identities=7% Similarity=0.044 Sum_probs=23.6
Q ss_pred CCCEEEEEeCCC--cEEEEECCCCCeEEEEE
Q psy11104 25 NQGWIAVGGDDG--LLKVLKLDTVSLTIMII 53 (70)
Q Consensus 25 dg~~LasGg~Dg--~IklWdi~~~~~~~~~~ 53 (70)
+|.+.+.||.|| ++..+|..++++...-.
T Consensus 512 ~~~iyv~Gg~~~~~~~e~yd~~~~~W~~~~~ 542 (557)
T PHA02713 512 DNTIMMLHCYESYMLQDTFNVYTYEWNHICH 542 (557)
T ss_pred CCEEEEEeeecceeehhhcCcccccccchhh
Confidence 677889999999 88899999998875433
No 426
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=21.56 E-value=2e+02 Score=19.99 Aligned_cols=31 Identities=29% Similarity=0.371 Sum_probs=24.3
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy11104 14 NTKVNCLAWHQNQGWIAVGGDDGLLKVLKLD 44 (70)
Q Consensus 14 ~~~V~~va~spdg~~LasGg~Dg~IklWdi~ 44 (70)
...+.+++|-+|++.++.+..+|.+.++...
T Consensus 172 ~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~ 202 (321)
T PF03178_consen 172 PRWVTAAEFLVDEDTIIVGDKDGNLFVLRYN 202 (321)
T ss_dssp -BEEEEEEEE-SSSEEEEEETTSEEEEEEE-
T ss_pred CccEEEEEEecCCcEEEEEcCCCeEEEEEEC
Confidence 3458888998777799999999999999865
No 427
>PF13622 4HBT_3: Thioesterase-like superfamily; PDB: 2PIM_A 3RQB_A 3CJY_A 3RD7_A 3BBJ_B.
Probab=21.12 E-value=84 Score=21.00 Aligned_cols=6 Identities=0% Similarity=-0.158 Sum_probs=2.9
Q ss_pred cEEEEE
Q psy11104 37 LLKVLK 42 (70)
Q Consensus 37 ~IklWd 42 (70)
..+|||
T Consensus 235 ~~~l~d 240 (255)
T PF13622_consen 235 EGRLWD 240 (255)
T ss_dssp EEEEEE
T ss_pred EEEEEC
Confidence 345555
No 428
>KOG3617|consensus
Probab=20.85 E-value=1.5e+02 Score=25.87 Aligned_cols=31 Identities=10% Similarity=0.273 Sum_probs=27.6
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLK 42 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWd 42 (70)
..+..++|+++..-+..|+.|...|.+.+|.
T Consensus 301 e~ge~~~c~cY~~~~~~l~agt~~gnv~~w~ 331 (1416)
T KOG3617|consen 301 ELGEGILCMCYGEKEIRLWAGTKEGNVTIWL 331 (1416)
T ss_pred hcCCceEEEEEeccceEEEecccCCcEEEee
Confidence 3456799999999999999999999999995
No 429
>PF10411 DsbC_N: Disulfide bond isomerase protein N-terminus; InterPro: IPR018950 This is the N-terminal domain of the disulphide bond isomerase DsbC. The whole molecule is V-shaped, where each arm is a DsbC monomer of two domains linked by a hinge; and the N-termini of each monomer join to form the dimer interface at the base of the V, so are vital for dimerisation []. DsbC is required for disulphide bond formation and functions as a disulphide bond isomerase during oxidative protein-folding in bacterial periplasm. It also has chaperone activity []. ; PDB: 1EEJ_B 2IYJ_A 1TJD_A 1JZD_B 1JZO_A 1G0T_B 1T3B_A.
Probab=20.79 E-value=1.1e+02 Score=16.55 Aligned_cols=10 Identities=20% Similarity=0.079 Sum_probs=4.4
Q ss_pred CeEEEEEcCC
Q psy11104 16 KVNCLAWHQN 25 (70)
Q Consensus 16 ~V~~va~spd 25 (70)
.|.+|.-+|-
T Consensus 13 ~v~~v~~spi 22 (57)
T PF10411_consen 13 KVESVSPSPI 22 (57)
T ss_dssp TCEEEEE-SS
T ss_pred ceeEEEcCCC
Confidence 4455555553
No 430
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=20.63 E-value=2.5e+02 Score=21.23 Aligned_cols=29 Identities=7% Similarity=0.074 Sum_probs=26.0
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy11104 16 KVNCLAWHQNQGWIAVGGDDGLLKVLKLD 44 (70)
Q Consensus 16 ~V~~va~spdg~~LasGg~Dg~IklWdi~ 44 (70)
.-+.|+++|.+.+.++...-++..++|..
T Consensus 24 N~WGia~~p~~~~WVadngT~~~TlYdg~ 52 (336)
T TIGR03118 24 NAWGLSYRPGGPFWVANTGTGTATLYVGN 52 (336)
T ss_pred ccceeEecCCCCEEEecCCcceEEeecCC
Confidence 35789999999999999999999999987
No 431
>PF12275 DUF3616: Protein of unknown function (DUF3616); InterPro: IPR022060 This family of proteins is found in bacteria. Proteins in this family are typically between 335 and 392 amino acids in length. There is a conserved GLRGPV sequence motif.
Probab=20.20 E-value=1.9e+02 Score=21.44 Aligned_cols=34 Identities=15% Similarity=0.252 Sum_probs=24.1
Q ss_pred CCCeEEEEEcCCCCEEEEEe---CCCcEEEEECCCCC
Q psy11104 14 NTKVNCLAWHQNQGWIAVGG---DDGLLKVLKLDTVS 47 (70)
Q Consensus 14 ~~~V~~va~spdg~~LasGg---~Dg~IklWdi~~~~ 47 (70)
+..|+.+++..++-+|.+|. .||..++|..+...
T Consensus 231 G~GIRdl~~~~~~~lILAGp~~~~~g~~~l~~W~g~~ 267 (330)
T PF12275_consen 231 GLGIRDLCYDGDDLLILAGPTMDLDGPFRLYRWSGAP 267 (330)
T ss_pred CCcEeeeeeCCCcEEEEeCCCCCCCCCEEEEEEeCCC
Confidence 56799999998877777663 46777777655443
Done!