Query psy11104
Match_columns 70
No_of_seqs 141 out of 1008
Neff 5.9
Searched_HMMs 29240
Date Fri Aug 16 18:04:41 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11104.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11104hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4h5i_A Guanine nucleotide-exch 99.1 1.5E-10 5.2E-15 79.8 6.7 40 8-47 306-345 (365)
2 3iz6_a 40S ribosomal protein R 99.1 4.5E-10 1.5E-14 77.2 7.7 47 10-56 62-108 (380)
3 4aow_A Guanine nucleotide-bind 99.1 3.2E-10 1.1E-14 74.2 6.6 37 11-47 35-72 (340)
4 2ynn_A Coatomer subunit beta'; 99.1 2.4E-10 8.2E-15 76.3 5.8 48 8-55 7-54 (304)
5 4ggc_A P55CDC, cell division c 99.1 2.2E-10 7.5E-15 74.4 5.3 36 11-46 281-316 (318)
6 4gqb_B Methylosome protein 50; 99.0 5.5E-10 1.9E-14 77.1 7.4 55 10-64 123-177 (344)
7 4gq1_A NUP37; propeller, trans 99.0 1.1E-10 3.6E-15 81.0 3.7 56 11-66 133-196 (393)
8 4h5i_A Guanine nucleotide-exch 99.0 3.5E-10 1.2E-14 78.0 6.0 55 12-66 267-322 (365)
9 4aow_A Guanine nucleotide-bind 99.0 2.8E-10 9.7E-15 74.5 5.1 36 12-47 304-339 (340)
10 2ymu_A WD-40 repeat protein; u 99.0 7.7E-10 2.6E-14 77.9 7.1 56 10-66 12-67 (577)
11 3bg1_A Protein SEC13 homolog; 99.0 3.2E-10 1.1E-14 76.2 4.7 42 7-48 6-47 (316)
12 3vu4_A KMHSV2; beta-propeller 99.0 1.4E-09 5E-14 74.3 7.9 45 10-54 191-236 (355)
13 2pm7_B Protein transport prote 99.0 6.9E-10 2.4E-14 73.8 6.1 38 9-46 4-41 (297)
14 3f3f_A Nucleoporin SEH1; struc 99.0 1.2E-09 4E-14 70.4 6.9 41 7-47 4-44 (351)
15 2pbi_B Guanine nucleotide-bind 99.0 1.4E-09 4.7E-14 74.4 7.7 46 9-54 59-104 (354)
16 1got_B GT-beta; complex (GTP-b 99.0 2.7E-09 9.2E-14 72.1 8.0 47 9-55 50-96 (340)
17 2xzm_R RACK1; ribosome, transl 98.9 3.9E-09 1.3E-13 71.3 8.3 57 10-66 72-128 (343)
18 3frx_A Guanine nucleotide-bind 98.9 2.4E-09 8.3E-14 71.9 6.9 54 11-64 62-115 (319)
19 4ggc_A P55CDC, cell division c 98.9 2.7E-09 9.1E-14 69.2 6.4 43 12-54 65-107 (318)
20 4ery_A WD repeat-containing pr 98.9 4.7E-09 1.6E-13 69.1 7.6 47 8-54 17-63 (312)
21 4g56_B MGC81050 protein; prote 98.9 2.7E-09 9.3E-14 73.2 6.6 54 11-64 136-189 (357)
22 2ynn_A Coatomer subunit beta'; 98.9 3.6E-09 1.2E-13 70.5 7.0 53 11-63 225-277 (304)
23 1vyh_C Platelet-activating fac 98.9 2.4E-09 8.1E-14 74.5 6.2 45 11-55 105-149 (410)
24 3ow8_A WD repeat-containing pr 98.9 3E-09 1E-13 72.0 6.5 54 11-64 245-298 (321)
25 4gga_A P55CDC, cell division c 98.9 1.8E-09 6.2E-14 74.6 4.9 37 11-47 361-397 (420)
26 4gga_A P55CDC, cell division c 98.9 4.2E-09 1.4E-13 72.8 6.7 43 12-54 145-187 (420)
27 3zwl_B Eukaryotic translation 98.9 5.3E-09 1.8E-13 68.5 6.8 46 11-56 29-74 (369)
28 3ow8_A WD repeat-containing pr 98.9 7.8E-09 2.7E-13 70.0 7.1 54 11-64 203-256 (321)
29 3frx_A Guanine nucleotide-bind 98.8 8.2E-09 2.8E-13 69.3 7.1 43 11-53 193-235 (319)
30 2xzm_R RACK1; ribosome, transl 98.8 7.7E-09 2.6E-13 69.8 6.9 37 11-47 210-246 (343)
31 4e54_B DNA damage-binding prot 98.8 3.7E-09 1.2E-13 73.6 5.2 56 11-66 116-174 (435)
32 3iz6_a 40S ribosomal protein R 98.8 6.8E-09 2.3E-13 71.2 6.4 42 11-52 246-287 (380)
33 4ery_A WD repeat-containing pr 98.8 1.5E-08 5.2E-13 66.7 7.8 47 10-56 61-107 (312)
34 3f3f_A Nucleoporin SEH1; struc 98.8 1.8E-08 6.3E-13 64.8 7.9 40 11-50 303-342 (351)
35 3vl1_A 26S proteasome regulato 98.8 9.8E-09 3.4E-13 69.4 6.8 47 9-55 134-180 (420)
36 1got_B GT-beta; complex (GTP-b 98.8 9.8E-09 3.3E-13 69.4 6.8 45 11-55 181-225 (340)
37 3jrp_A Fusion protein of prote 98.8 3.3E-09 1.1E-13 70.0 4.1 40 8-47 5-44 (379)
38 4g56_B MGC81050 protein; prote 98.8 8.1E-09 2.8E-13 70.8 6.0 40 12-51 309-349 (357)
39 2hes_X YDR267CP; beta-propelle 98.8 1.5E-08 5.1E-13 68.3 7.0 36 10-45 103-138 (330)
40 2hes_X YDR267CP; beta-propelle 98.8 1.1E-08 3.9E-13 68.9 6.4 38 10-47 149-186 (330)
41 4gqb_B Methylosome protein 50; 98.8 8.9E-09 3E-13 71.0 5.9 38 11-48 254-292 (344)
42 3dwl_C Actin-related protein 2 98.8 7.7E-09 2.6E-13 69.2 5.3 37 11-47 52-88 (377)
43 3mmy_A MRNA export factor; mRN 98.8 1.7E-08 5.8E-13 66.1 6.9 41 9-49 34-77 (368)
44 1vyh_C Platelet-activating fac 98.8 8.4E-09 2.9E-13 71.7 5.7 55 11-65 335-389 (410)
45 3fm0_A Protein CIAO1; WDR39,SG 98.8 4.1E-08 1.4E-12 66.6 8.9 40 10-49 57-96 (345)
46 1nr0_A Actin interacting prote 98.8 2E-08 6.7E-13 73.2 7.8 38 10-47 55-92 (611)
47 2ymu_A WD-40 repeat protein; u 98.8 1.4E-08 4.8E-13 71.4 6.6 40 11-51 54-93 (577)
48 3dm0_A Maltose-binding peripla 98.8 2.2E-08 7.5E-13 73.5 7.8 55 10-64 426-480 (694)
49 1nr0_A Actin interacting prote 98.8 2E-08 6.9E-13 73.2 7.1 43 10-52 186-228 (611)
50 3mmy_A MRNA export factor; mRN 98.8 8E-09 2.7E-13 67.7 4.5 39 16-54 275-313 (368)
51 3lrv_A PRE-mRNA-splicing facto 98.7 1.1E-08 3.9E-13 68.8 5.2 43 12-54 168-211 (343)
52 3odt_A Protein DOA1; ubiquitin 98.7 1.9E-08 6.5E-13 64.9 6.1 47 8-55 12-58 (313)
53 2aq5_A Coronin-1A; WD40 repeat 98.7 2.5E-08 8.5E-13 68.1 6.6 36 11-46 78-114 (402)
54 1erj_A Transcriptional repress 98.7 2.5E-08 8.6E-13 68.7 6.3 40 16-55 125-164 (393)
55 3zwl_B Eukaryotic translation 98.7 6.6E-08 2.2E-12 63.3 7.9 43 11-53 71-113 (369)
56 3fm0_A Protein CIAO1; WDR39,SG 98.7 4.7E-08 1.6E-12 66.2 7.4 38 11-48 102-139 (345)
57 2pm7_B Protein transport prote 98.7 2.4E-08 8.4E-13 66.2 5.6 37 11-47 50-88 (297)
58 4a11_B DNA excision repair pro 98.7 4.5E-08 1.6E-12 65.0 6.8 42 8-49 37-79 (408)
59 3dw8_B Serine/threonine-protei 98.7 3.3E-08 1.1E-12 67.1 5.9 36 12-47 26-61 (447)
60 1yfq_A Cell cycle arrest prote 98.7 2.2E-08 7.5E-13 65.7 4.8 40 8-47 5-44 (342)
61 2pbi_B Guanine nucleotide-bind 98.7 5.8E-08 2E-12 66.3 7.1 46 12-57 152-197 (354)
62 4e54_B DNA damage-binding prot 98.7 2.8E-08 9.4E-13 69.1 5.5 45 11-55 293-337 (435)
63 3vu4_A KMHSV2; beta-propeller 98.7 6.2E-08 2.1E-12 66.2 7.1 35 13-47 239-273 (355)
64 2pm9_A Protein WEB1, protein t 98.7 5.2E-08 1.8E-12 65.4 6.6 54 12-65 260-314 (416)
65 3mkq_A Coatomer beta'-subunit; 98.7 3.2E-08 1.1E-12 72.2 5.8 48 8-55 7-54 (814)
66 3k26_A Polycomb protein EED; W 98.7 4.9E-08 1.7E-12 64.0 6.1 41 12-52 113-154 (366)
67 3ei3_B DNA damage-binding prot 98.7 6E-08 2.1E-12 65.3 6.6 44 10-53 69-113 (383)
68 1erj_A Transcriptional repress 98.6 5.6E-08 1.9E-12 66.9 6.4 47 11-57 307-353 (393)
69 1k8k_C P40, ARP2/3 complex 41 98.6 3.5E-08 1.2E-12 65.2 5.0 38 10-47 4-41 (372)
70 2oit_A Nucleoporin 214KDA; NH2 98.6 5.8E-08 2E-12 69.1 6.3 42 11-52 146-188 (434)
71 3bg1_A Protein SEC13 homolog; 98.6 5.2E-08 1.8E-12 65.3 5.7 37 11-47 54-92 (316)
72 3gre_A Serine/threonine-protei 98.6 4E-08 1.4E-12 67.2 5.3 38 8-45 57-95 (437)
73 4aez_A CDC20, WD repeat-contai 98.6 1E-07 3.5E-12 65.3 7.3 45 11-55 214-258 (401)
74 3lrv_A PRE-mRNA-splicing facto 98.6 1.3E-07 4.3E-12 63.6 7.5 41 8-48 119-161 (343)
75 1sq9_A Antiviral protein SKI8; 98.6 7E-08 2.4E-12 64.6 6.1 41 13-53 290-330 (397)
76 3sfz_A APAF-1, apoptotic pepti 98.6 8.4E-08 2.9E-12 73.6 7.2 55 10-64 611-665 (1249)
77 2aq5_A Coronin-1A; WD40 repeat 98.6 6.1E-08 2.1E-12 66.1 5.6 41 12-52 129-170 (402)
78 3jrp_A Fusion protein of prote 98.6 1.2E-07 4E-12 62.5 6.6 38 11-48 52-91 (379)
79 1sq9_A Antiviral protein SKI8; 98.6 1.1E-07 3.9E-12 63.6 6.6 41 5-47 7-47 (397)
80 3dwl_C Actin-related protein 2 98.6 4.3E-08 1.5E-12 65.5 4.5 40 6-45 138-177 (377)
81 4a11_B DNA excision repair pro 98.6 6.8E-08 2.3E-12 64.2 5.3 40 11-50 331-370 (408)
82 3gre_A Serine/threonine-protei 98.6 1.5E-07 5.2E-12 64.3 7.2 41 13-53 213-253 (437)
83 1k8k_C P40, ARP2/3 complex 41 98.6 2.1E-07 7.3E-12 61.4 7.7 39 6-44 134-172 (372)
84 3i2n_A WD repeat-containing pr 98.6 1.5E-07 5E-12 61.7 6.7 47 7-53 11-61 (357)
85 4aez_A CDC20, WD repeat-contai 98.6 2E-07 7E-12 63.8 7.6 46 9-54 129-174 (401)
86 1yfq_A Cell cycle arrest prote 98.6 9.7E-08 3.3E-12 62.5 5.7 41 14-54 251-291 (342)
87 3vl1_A 26S proteasome regulato 98.6 1.5E-07 5.1E-12 63.6 6.8 43 11-53 178-220 (420)
88 3odt_A Protein DOA1; ubiquitin 98.6 1.5E-07 5.1E-12 60.6 6.4 45 11-56 222-266 (313)
89 3sfz_A APAF-1, apoptotic pepti 98.6 1.5E-07 5.3E-12 72.1 7.3 55 12-66 655-709 (1249)
90 2pm9_A Protein WEB1, protein t 98.6 1E-07 3.5E-12 64.0 5.5 35 11-45 64-98 (416)
91 3dw8_B Serine/threonine-protei 98.5 1.3E-07 4.5E-12 64.2 5.9 37 12-48 224-261 (447)
92 3mkq_A Coatomer beta'-subunit; 98.5 1.3E-07 4.5E-12 69.0 6.2 53 12-64 53-105 (814)
93 3k26_A Polycomb protein EED; W 98.5 1.5E-07 5.3E-12 61.6 5.8 54 13-66 68-125 (366)
94 1gxr_A ESG1, transducin-like e 98.5 3.2E-07 1.1E-11 59.4 7.3 44 11-54 138-181 (337)
95 3i2n_A WD repeat-containing pr 98.5 1.6E-07 5.4E-12 61.5 5.8 36 12-47 319-355 (357)
96 3v7d_B Cell division control p 98.5 2.1E-07 7.3E-12 64.1 6.3 45 11-55 307-351 (464)
97 1pgu_A Actin interacting prote 98.5 1.2E-07 4.1E-12 66.4 5.1 42 11-52 485-526 (615)
98 3dm0_A Maltose-binding peripla 98.5 1.7E-07 5.8E-12 68.8 6.0 41 10-50 557-597 (694)
99 1gxr_A ESG1, transducin-like e 98.5 3.5E-07 1.2E-11 59.3 6.9 37 12-48 95-131 (337)
100 2oaj_A Protein SNI1; WD40 repe 98.5 7.3E-08 2.5E-12 74.4 4.2 35 12-46 486-520 (902)
101 1r5m_A SIR4-interacting protei 98.5 2.5E-07 8.6E-12 61.6 6.2 40 13-53 107-146 (425)
102 2oaj_A Protein SNI1; WD40 repe 98.5 2.5E-07 8.4E-12 71.5 6.2 38 12-49 209-246 (902)
103 2w18_A PALB2, fancn, partner a 98.5 1.1E-07 3.7E-12 68.9 3.8 32 12-43 323-355 (356)
104 3v7d_B Cell division control p 98.4 2.8E-07 9.7E-12 63.4 5.5 42 11-53 159-200 (464)
105 1pgu_A Actin interacting prote 98.4 1.6E-07 5.5E-12 65.8 4.2 38 13-50 530-577 (615)
106 2vdu_B TRNA (guanine-N(7)-)-me 98.4 4.2E-07 1.4E-11 63.3 6.1 42 12-53 100-144 (450)
107 1r5m_A SIR4-interacting protei 98.4 5.9E-07 2E-11 59.8 6.5 44 11-54 146-189 (425)
108 3ei3_B DNA damage-binding prot 98.4 7.2E-07 2.5E-11 60.0 6.9 43 12-55 161-203 (383)
109 2xyi_A Probable histone-bindin 98.4 5.4E-07 1.9E-11 62.6 6.5 38 12-49 275-313 (430)
110 3jro_A Fusion protein of prote 98.4 1.1E-07 3.8E-12 71.3 3.1 41 8-48 3-43 (753)
111 2w18_A PALB2, fancn, partner a 98.4 4.3E-07 1.5E-11 65.8 6.0 44 12-55 176-222 (356)
112 2j04_B YDR362CP, TAU91; beta p 98.4 4.5E-07 1.5E-11 66.7 6.0 55 11-66 263-320 (524)
113 4gq1_A NUP37; propeller, trans 98.4 2.2E-07 7.6E-12 64.2 4.0 44 11-54 183-227 (393)
114 2j04_A TAU60, YPL007P, hypothe 98.4 3.5E-07 1.2E-11 69.9 5.3 32 16-47 131-162 (588)
115 2vdu_B TRNA (guanine-N(7)-)-me 98.4 1.4E-06 4.7E-11 60.6 7.8 44 10-54 237-280 (450)
116 2oit_A Nucleoporin 214KDA; NH2 98.4 6.5E-07 2.2E-11 63.7 6.3 33 12-44 190-222 (434)
117 3jro_A Fusion protein of prote 98.3 1.1E-06 3.6E-11 66.0 6.9 38 11-48 50-89 (753)
118 2xyi_A Probable histone-bindin 98.3 3.3E-06 1.1E-10 58.7 7.6 37 10-46 227-264 (430)
119 1p22_A F-BOX/WD-repeat protein 98.2 3.6E-06 1.2E-10 58.1 7.0 43 11-55 170-212 (435)
120 2j04_B YDR362CP, TAU91; beta p 98.2 2.1E-06 7.1E-11 63.1 5.3 50 16-65 357-406 (524)
121 2j04_A TAU60, YPL007P, hypothe 98.0 4.9E-06 1.7E-10 63.6 4.8 35 11-45 82-116 (588)
122 3bws_A Protein LP49; two-domai 98.0 4.8E-06 1.6E-10 56.5 4.3 42 12-53 167-208 (433)
123 1p22_A F-BOX/WD-repeat protein 98.0 1.9E-05 6.6E-10 54.5 7.0 45 8-54 250-294 (435)
124 2ovr_B FBW7, F-BOX/WD repeat p 97.9 1.9E-05 6.6E-10 54.4 6.1 40 12-53 360-399 (445)
125 2hqs_A Protein TOLB; TOLB, PAL 97.9 2.5E-05 8.7E-10 54.6 6.4 38 12-49 176-216 (415)
126 2ovr_B FBW7, F-BOX/WD repeat p 97.9 2.3E-05 7.7E-10 54.0 5.8 41 11-53 156-196 (445)
127 1l0q_A Surface layer protein; 97.9 2.8E-05 9.7E-10 52.0 5.7 41 13-53 30-71 (391)
128 2ojh_A Uncharacterized protein 97.8 4.4E-05 1.5E-09 48.0 5.2 37 12-49 39-76 (297)
129 1l0q_A Surface layer protein; 97.7 0.00015 5.3E-09 48.4 6.8 41 14-54 243-284 (391)
130 1k32_A Tricorn protease; prote 97.6 0.00018 6.2E-09 55.5 7.8 41 12-52 376-416 (1045)
131 1pby_B Quinohemoprotein amine 97.6 0.00022 7.7E-09 46.0 6.4 42 14-55 279-320 (337)
132 2hqs_A Protein TOLB; TOLB, PAL 97.5 0.00016 5.4E-09 50.5 5.8 37 12-48 220-259 (415)
133 3bws_A Protein LP49; two-domai 97.5 0.00021 7.1E-09 48.4 5.7 38 12-49 209-247 (433)
134 3o4h_A Acylamino-acid-releasin 97.5 2.8E-05 9.4E-10 55.7 1.2 42 13-55 20-62 (582)
135 1nir_A Nitrite reductase; hemo 97.4 0.00062 2.1E-08 49.8 8.0 36 17-52 181-218 (543)
136 2ecf_A Dipeptidyl peptidase IV 97.4 0.00041 1.4E-08 50.5 6.6 37 14-50 36-78 (741)
137 2ojh_A Uncharacterized protein 97.4 0.00041 1.4E-08 43.4 5.7 39 12-50 214-263 (297)
138 3o4h_A Acylamino-acid-releasin 97.4 0.00019 6.4E-09 51.4 4.5 38 12-49 192-231 (582)
139 1jmx_B Amine dehydrogenase; ox 97.3 0.00033 1.1E-08 45.5 5.0 39 14-52 294-332 (349)
140 1ri6_A Putative isomerase YBHE 97.3 0.00069 2.4E-08 43.8 5.8 36 12-47 35-73 (343)
141 1k32_A Tricorn protease; prote 97.1 0.00034 1.2E-08 53.9 3.9 38 10-47 416-463 (1045)
142 1z68_A Fibroblast activation p 97.0 0.00041 1.4E-08 50.6 3.3 33 16-48 61-102 (719)
143 3pe7_A Oligogalacturonate lyas 97.0 0.0017 5.8E-08 43.2 5.8 39 12-50 78-116 (388)
144 2oiz_A Aromatic amine dehydrog 97.0 0.0013 4.4E-08 45.3 5.4 34 17-51 307-342 (361)
145 2z3z_A Dipeptidyl aminopeptida 96.9 0.0025 8.6E-08 46.2 6.8 39 12-50 255-298 (706)
146 2bkl_A Prolyl endopeptidase; m 96.9 0.00051 1.7E-08 50.7 3.1 36 13-48 119-159 (695)
147 1xfd_A DIP, dipeptidyl aminope 96.9 0.002 6.7E-08 46.7 6.0 33 16-48 62-103 (723)
148 3hfq_A Uncharacterized protein 96.9 0.002 6.9E-08 42.5 5.6 33 13-45 84-117 (347)
149 3hfq_A Uncharacterized protein 96.9 0.002 6.9E-08 42.5 5.4 36 13-48 284-322 (347)
150 2ecf_A Dipeptidyl peptidase IV 96.9 0.0022 7.5E-08 46.7 6.0 36 12-48 149-184 (741)
151 1pby_B Quinohemoprotein amine 96.9 0.0029 1E-07 40.7 6.0 38 13-52 239-276 (337)
152 3scy_A Hypothetical bacterial 96.8 0.006 2E-07 40.6 7.6 38 10-47 206-244 (361)
153 3u4y_A Uncharacterized protein 96.7 0.005 1.7E-07 40.0 6.5 37 12-48 173-210 (331)
154 1jmx_B Amine dehydrogenase; ox 96.7 0.0086 3E-07 38.7 7.2 38 16-53 44-82 (349)
155 4a5s_A Dipeptidyl peptidase 4 96.6 0.0031 1.1E-07 46.8 5.5 35 14-50 16-50 (740)
156 3u4y_A Uncharacterized protein 96.6 0.0086 2.9E-07 38.9 7.1 34 14-48 40-74 (331)
157 1ri6_A Putative isomerase YBHE 96.6 0.0085 2.9E-07 38.6 6.8 35 11-45 174-209 (343)
158 1xfd_A DIP, dipeptidyl aminope 96.6 0.0017 5.8E-08 47.0 3.6 20 17-36 175-194 (723)
159 2z3z_A Dipeptidyl aminopeptida 96.5 0.0019 6.5E-08 46.8 3.7 32 17-48 183-247 (706)
160 3vgz_A Uncharacterized protein 96.5 0.004 1.4E-07 40.5 5.0 41 13-53 183-223 (353)
161 1z68_A Fibroblast activation p 96.5 0.0019 6.5E-08 47.0 3.7 33 15-48 110-142 (719)
162 3vgz_A Uncharacterized protein 96.4 0.017 5.7E-07 37.5 7.3 41 13-53 229-270 (353)
163 1jof_A Carboxy-CIS,CIS-muconat 96.3 0.0098 3.4E-07 40.1 6.0 36 13-48 143-180 (365)
164 1nir_A Nitrite reductase; hemo 96.3 0.0086 3E-07 43.7 5.9 41 13-53 220-265 (543)
165 2xdw_A Prolyl endopeptidase; a 96.3 0.0042 1.4E-07 45.9 4.2 35 15-49 125-164 (710)
166 3scy_A Hypothetical bacterial 96.2 0.016 5.5E-07 38.4 6.6 31 14-44 258-290 (361)
167 3c5m_A Oligogalacturonate lyas 96.2 0.011 3.7E-07 39.1 5.4 31 19-49 85-115 (396)
168 1xip_A Nucleoporin NUP159; bet 96.1 0.0069 2.4E-07 43.6 4.7 34 13-48 161-194 (388)
169 4a5s_A Dipeptidyl peptidase 4 96.1 0.0072 2.5E-07 44.9 4.7 35 12-47 109-143 (740)
170 3azo_A Aminopeptidase; POP fam 96.1 0.0023 8E-08 46.0 1.9 33 13-45 128-170 (662)
171 3iuj_A Prolyl endopeptidase; h 96.0 0.005 1.7E-07 45.7 3.4 37 12-48 126-167 (693)
172 2dg1_A DRP35, lactonase; beta 96.0 0.02 6.7E-07 37.5 5.9 38 12-49 42-79 (333)
173 3azo_A Aminopeptidase; POP fam 95.9 0.02 7E-07 41.1 6.3 36 12-47 239-276 (662)
174 1yr2_A Prolyl oligopeptidase; 95.9 0.0066 2.3E-07 45.2 3.6 34 16-49 164-202 (741)
175 1jof_A Carboxy-CIS,CIS-muconat 95.9 0.018 6.3E-07 38.8 5.6 32 13-44 191-223 (365)
176 3pe7_A Oligogalacturonate lyas 95.7 0.0094 3.2E-07 39.6 3.6 29 20-48 41-72 (388)
177 3c5m_A Oligogalacturonate lyas 95.6 0.013 4.4E-07 38.7 3.9 34 16-49 239-277 (396)
178 1q7f_A NHL, brain tumor CG1071 95.6 0.026 8.8E-07 36.2 5.2 29 16-45 252-280 (286)
179 3fvz_A Peptidyl-glycine alpha- 95.4 0.052 1.8E-06 36.2 6.5 36 14-49 23-82 (329)
180 1qks_A Cytochrome CD1 nitrite 95.4 0.051 1.8E-06 40.4 7.1 40 14-53 196-237 (567)
181 2gop_A Trilobed protease; beta 95.4 0.042 1.4E-06 35.9 5.8 32 17-48 106-164 (347)
182 3e5z_A Putative gluconolactona 95.4 0.042 1.4E-06 35.6 5.7 37 13-49 67-103 (296)
183 3e5z_A Putative gluconolactona 95.0 0.056 1.9E-06 35.0 5.5 32 13-44 170-201 (296)
184 2mad_H Methylamine dehydrogena 94.9 0.097 3.3E-06 36.4 6.8 38 14-51 317-356 (373)
185 2dg1_A DRP35, lactonase; beta 94.8 0.092 3.1E-06 34.2 6.2 38 12-49 84-125 (333)
186 3fvz_A Peptidyl-glycine alpha- 94.7 0.033 1.1E-06 37.2 3.9 34 12-45 289-322 (329)
187 1q7f_A NHL, brain tumor CG1071 94.6 0.12 4E-06 33.1 6.2 34 12-45 118-151 (286)
188 2oiz_A Aromatic amine dehydrog 94.4 0.058 2E-06 36.9 4.6 37 15-51 108-146 (361)
189 1xip_A Nucleoporin NUP159; bet 94.4 0.089 3.1E-06 37.8 5.7 40 12-55 86-125 (388)
190 2xdw_A Prolyl endopeptidase; a 94.1 0.056 1.9E-06 39.8 4.2 31 17-47 173-219 (710)
191 2gop_A Trilobed protease; beta 94.1 0.065 2.2E-06 35.0 4.1 33 12-47 260-293 (347)
192 2bkl_A Prolyl endopeptidase; m 93.5 0.07 2.4E-06 39.3 3.9 30 18-47 171-213 (695)
193 1rwi_B Serine/threonine-protei 93.2 0.12 4.2E-06 32.4 4.3 32 15-46 234-265 (270)
194 4gq2_M Nucleoporin NUP120; bet 92.8 0.32 1.1E-05 38.3 6.8 40 15-54 236-275 (950)
195 1pjx_A Dfpase, DIISOPROPYLFLUO 92.4 0.18 6.1E-06 32.3 4.2 34 15-48 18-58 (314)
196 1yr2_A Prolyl oligopeptidase; 91.9 0.29 9.8E-06 36.4 5.3 31 16-46 269-304 (741)
197 1mda_H Methylamine dehydrogena 91.9 0.26 8.9E-06 34.8 4.9 38 16-53 315-354 (368)
198 4fhn_B Nucleoporin NUP120; pro 91.9 0.4 1.4E-05 38.2 6.4 39 16-54 239-277 (1139)
199 1pjx_A Dfpase, DIISOPROPYLFLUO 91.6 0.47 1.6E-05 30.3 5.5 33 15-47 226-258 (314)
200 3dsm_A Uncharacterized protein 91.3 0.78 2.7E-05 30.6 6.6 39 8-48 218-256 (328)
201 3dsm_A Uncharacterized protein 91.2 0.64 2.2E-05 31.0 6.1 41 13-53 82-122 (328)
202 3sjl_D Methylamine dehydrogena 91.2 0.43 1.5E-05 34.3 5.5 41 15-55 331-373 (386)
203 3g4e_A Regucalcin; six bladed 91.1 0.65 2.2E-05 30.3 5.9 38 15-52 199-236 (297)
204 1rwi_B Serine/threonine-protei 91.1 0.59 2E-05 29.2 5.5 33 15-47 192-224 (270)
205 2iwa_A Glutamine cyclotransfer 90.8 1.5 5E-05 29.9 7.7 46 8-53 14-61 (266)
206 3hrp_A Uncharacterized protein 90.7 0.67 2.3E-05 32.4 6.0 35 15-49 131-165 (409)
207 3c75_H MADH, methylamine dehyd 89.7 0.94 3.2E-05 32.7 6.2 37 16-52 371-409 (426)
208 2z2n_A Virginiamycin B lyase; 89.6 1.1 3.6E-05 28.1 5.7 32 13-44 13-44 (299)
209 3no2_A Uncharacterized protein 89.5 0.38 1.3E-05 31.9 3.8 31 25-55 4-34 (276)
210 1mda_H Methylamine dehydrogena 88.6 1.1 3.8E-05 31.6 5.8 37 19-55 69-115 (368)
211 2qe8_A Uncharacterized protein 88.5 1.7 5.8E-05 29.0 6.5 39 13-51 65-108 (343)
212 3sjl_D Methylamine dehydrogena 88.0 1.3 4.6E-05 31.7 6.0 37 16-52 138-176 (386)
213 3g4e_A Regucalcin; six bladed 87.8 1.7 5.7E-05 28.3 6.0 33 14-48 53-85 (297)
214 2z2n_A Virginiamycin B lyase; 87.8 1.9 6.7E-05 26.8 6.1 32 13-44 55-86 (299)
215 3dr2_A Exported gluconolactona 87.7 0.94 3.2E-05 29.6 4.7 32 16-47 189-226 (305)
216 3pbp_A Nucleoporin NUP82; beta 87.0 1.5 5.2E-05 32.7 5.9 38 13-50 123-164 (452)
217 3dr2_A Exported gluconolactona 86.6 2 7E-05 27.9 5.9 32 13-44 84-115 (305)
218 2xe4_A Oligopeptidase B; hydro 86.3 0.53 1.8E-05 35.5 3.2 31 16-46 175-211 (751)
219 2qe8_A Uncharacterized protein 86.2 1.1 3.8E-05 29.9 4.5 34 14-47 247-280 (343)
220 3no2_A Uncharacterized protein 86.1 1 3.5E-05 29.7 4.3 38 16-54 126-163 (276)
221 2mad_H Methylamine dehydrogena 86.0 1.8 6.3E-05 29.9 5.7 34 17-51 127-162 (373)
222 3hrp_A Uncharacterized protein 85.8 2.4 8.4E-05 29.5 6.3 33 16-48 324-357 (409)
223 3nol_A Glutamine cyclotransfer 85.8 2.8 9.5E-05 28.8 6.4 42 12-54 38-83 (262)
224 1qks_A Cytochrome CD1 nitrite 85.1 2.6 9E-05 31.2 6.4 41 14-54 341-382 (567)
225 2qc5_A Streptogramin B lactona 83.5 3.6 0.00012 25.6 5.7 31 14-44 19-49 (300)
226 3f7f_A Nucleoporin NUP120; nuc 83.1 2.9 9.9E-05 32.9 6.1 38 15-54 222-259 (729)
227 1yiq_A Quinohemoprotein alcoho 82.7 1.3 4.4E-05 33.3 3.9 35 20-54 480-514 (689)
228 1kb0_A Quinohemoprotein alcoho 82.1 1.5 5E-05 32.9 4.0 39 16-54 478-516 (677)
229 2p4o_A Hypothetical protein; p 82.0 4.3 0.00015 26.5 5.9 33 14-46 31-63 (306)
230 2qc5_A Streptogramin B lactona 81.9 4.5 0.00015 25.1 5.7 31 14-44 61-91 (300)
231 2hz6_A Endoplasmic reticulum t 80.6 3.6 0.00012 28.0 5.3 30 25-54 8-37 (369)
232 3nok_A Glutaminyl cyclase; bet 79.5 4.8 0.00017 27.8 5.7 40 12-52 52-91 (268)
233 2fp8_A Strictosidine synthase; 79.3 2.3 7.8E-05 27.9 3.8 40 8-47 11-51 (322)
234 3iuj_A Prolyl endopeptidase; h 78.6 4.3 0.00015 30.0 5.5 33 15-47 234-270 (693)
235 2ghs_A AGR_C_1268P; regucalcin 78.4 3.7 0.00013 27.2 4.7 32 16-47 50-82 (326)
236 3c75_H MADH, methylamine dehyd 78.2 4.7 0.00016 29.0 5.5 36 19-54 122-167 (426)
237 3mbr_X Glutamine cyclotransfer 77.9 13 0.00046 25.0 7.6 39 14-53 20-60 (243)
238 2hz6_A Endoplasmic reticulum t 77.7 0.75 2.6E-05 31.5 1.1 34 16-49 39-72 (369)
239 1k3i_A Galactose oxidase precu 74.6 4.2 0.00014 29.9 4.5 37 13-49 241-278 (656)
240 2ghs_A AGR_C_1268P; regucalcin 73.6 11 0.00039 24.7 6.1 30 15-44 230-259 (326)
241 3sre_A PON1, serum paraoxonase 70.4 7.7 0.00026 27.3 4.9 32 15-46 221-253 (355)
242 3das_A Putative oxidoreductase 68.5 25 0.00086 24.6 7.2 34 15-48 32-65 (347)
243 2fp8_A Strictosidine synthase; 64.3 8.8 0.0003 25.0 3.9 30 16-45 186-216 (322)
244 2xe4_A Oligopeptidase B; hydro 60.4 18 0.00062 27.1 5.5 32 15-46 271-305 (751)
245 2xbg_A YCF48-like protein; pho 60.4 23 0.00077 23.6 5.5 34 9-42 157-190 (327)
246 1kv9_A Type II quinohemoprotei 59.4 10 0.00036 28.2 4.0 34 21-54 464-497 (668)
247 1fwx_A Nitrous oxide reductase 58.0 6.1 0.00021 30.2 2.5 32 15-46 277-309 (595)
248 3rd7_A Acyl-COA thioesterase; 54.4 3.7 0.00013 28.0 0.7 26 15-40 258-283 (286)
249 1tl2_A L10, protein (tachylect 54.0 13 0.00046 25.4 3.5 35 5-43 31-65 (236)
250 3qqz_A Putative uncharacterize 53.2 27 0.00093 23.3 4.9 32 15-46 173-205 (255)
251 1npe_A Nidogen, entactin; glyc 52.7 36 0.0012 21.3 5.3 32 16-47 37-69 (267)
252 1cru_A Protein (soluble quinop 52.2 49 0.0017 23.5 6.4 33 15-47 27-59 (454)
253 1k3i_A Galactose oxidase precu 52.1 17 0.0006 26.5 4.1 31 19-49 190-232 (656)
254 1flg_A Protein (quinoprotein e 50.9 27 0.00093 25.7 5.0 29 26-54 497-525 (582)
255 1cru_A Protein (soluble quinop 50.4 31 0.001 24.6 5.1 40 14-53 404-450 (454)
256 3u0a_A Acyl-COA thioesterase I 49.6 6.5 0.00022 26.7 1.4 27 15-41 251-277 (285)
257 2ece_A 462AA long hypothetical 48.9 25 0.00085 26.1 4.5 36 17-52 190-244 (462)
258 2g8s_A Glucose/sorbosone dehyd 48.2 30 0.001 23.4 4.6 27 16-43 19-46 (353)
259 2p9w_A MAL S 1 allergenic prot 47.9 22 0.00075 25.2 3.9 30 16-45 186-215 (334)
260 3ei3_A DNA damage-binding prot 47.6 49 0.0017 26.8 6.3 34 14-47 553-593 (1158)
261 1zso_A Hypothetical protein; s 47.0 36 0.0012 21.8 4.6 30 17-46 112-141 (164)
262 2ad6_A Methanol dehydrogenase 46.5 17 0.00059 26.6 3.3 30 25-54 474-503 (571)
263 2ism_A Putative oxidoreductase 45.9 35 0.0012 23.1 4.6 27 15-42 31-57 (352)
264 3tc9_A Hypothetical hydrolase; 43.9 32 0.0011 24.1 4.3 31 15-45 270-301 (430)
265 2p4o_A Hypothetical protein; p 42.7 65 0.0022 20.7 6.9 34 15-48 72-107 (306)
266 2ece_A 462AA long hypothetical 39.9 63 0.0022 23.9 5.5 31 15-45 321-352 (462)
267 3a9g_A Putative uncharacterize 39.8 37 0.0013 23.1 4.0 27 15-42 29-55 (354)
268 1fwx_A Nitrous oxide reductase 38.3 71 0.0024 24.4 5.6 48 7-54 126-193 (595)
269 3kya_A Putative phosphatase; s 36.6 97 0.0033 22.8 6.0 35 12-46 307-342 (496)
270 1w6s_A Methanol dehydrogenase 35.4 63 0.0022 24.0 4.9 29 25-53 483-511 (599)
271 4hw6_A Hypothetical protein, I 35.0 67 0.0023 22.5 4.8 28 18-45 276-304 (433)
272 3q7m_A Lipoprotein YFGL, BAMB; 34.0 86 0.0029 20.4 5.0 29 26-54 318-346 (376)
273 1ukf_A Avirulence protein AVRP 34.0 42 0.0014 22.3 3.4 43 9-51 113-156 (188)
274 1kb0_A Quinohemoprotein alcoho 33.3 72 0.0025 23.7 4.9 33 21-53 319-354 (677)
275 3tc9_A Hypothetical hydrolase; 31.4 62 0.0021 22.5 4.1 33 16-48 227-260 (430)
276 1c8u_A Acyl-COA thioesterase I 30.8 37 0.0012 22.7 2.7 23 17-39 260-282 (285)
277 3mwp_A Nucleoprotein; structur 30.4 12 0.0004 28.6 0.2 18 31-48 162-179 (577)
278 2xbg_A YCF48-like protein; pho 30.2 1.2E+02 0.004 19.9 6.2 29 9-38 30-58 (327)
279 2iwa_A Glutamine cyclotransfer 30.1 1.2E+02 0.0042 20.2 5.7 38 16-54 153-190 (266)
280 2wg3_C Hedgehog-interacting pr 29.3 60 0.0021 23.4 3.8 28 16-44 15-44 (463)
281 1yiq_A Quinohemoprotein alcoho 28.3 1.6E+02 0.0056 21.8 6.2 28 24-51 314-344 (689)
282 4a2l_A BT_4663, two-component 24.6 2.1E+02 0.0073 21.0 6.2 34 14-47 405-438 (795)
283 3nol_A Glutamine cyclotransfer 23.9 1.6E+02 0.0054 19.9 5.0 38 16-54 173-210 (262)
284 3v65_B Low-density lipoprotein 23.2 1.8E+02 0.0061 19.7 5.8 33 15-47 116-149 (386)
285 1flg_A Protein (quinoprotein e 22.7 1.6E+02 0.0056 21.4 5.2 31 24-54 331-364 (582)
286 1s28_A ORF1; type III chaperon 22.2 1.3E+02 0.0044 18.9 3.9 29 12-41 27-55 (132)
287 1q47_A Semaphorin 3A; beta pro 21.7 1.1E+02 0.0039 22.3 4.2 28 13-40 460-487 (495)
288 3cjy_A Putative thioesterase; 21.2 24 0.00082 23.3 0.4 24 16-39 235-258 (259)
289 3v64_C Agrin; beta propeller, 20.8 1.9E+02 0.0066 19.2 5.5 33 15-47 73-106 (349)
No 1
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.11 E-value=1.5e-10 Score=79.80 Aligned_cols=40 Identities=8% Similarity=0.111 Sum_probs=35.5
Q ss_pred eeecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy11104 8 KIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 8 ~I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~ 47 (70)
.+...|.+.|++|+|||||++|||||.|++|||||+....
T Consensus 306 ~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~~ 345 (365)
T 4h5i_A 306 IFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLNY 345 (365)
T ss_dssp EETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTTT
T ss_pred EecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCCC
Confidence 3456899999999999999999999999999999986543
No 2
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.07 E-value=4.5e-10 Score=77.17 Aligned_cols=47 Identities=30% Similarity=0.376 Sum_probs=41.2
Q ss_pred ecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEecc
Q psy11104 10 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQ 56 (70)
Q Consensus 10 ~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~ 56 (70)
-.+|.+.|++++|+|++++|||||.||+|+|||+.++.....+..+.
T Consensus 62 l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~ 108 (380)
T 3iz6_a 62 LQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHC 108 (380)
T ss_dssp ECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCC
T ss_pred ccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCC
Confidence 45799999999999999999999999999999999888766665443
No 3
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.07 E-value=3.2e-10 Score=74.22 Aligned_cols=37 Identities=19% Similarity=0.089 Sum_probs=33.8
Q ss_pred cCCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCC
Q psy11104 11 IPNNTKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 11 ~~~~~~V~~va~spd-g~~LasGg~Dg~IklWdi~~~~ 47 (70)
.+|.+.|++|+|+|+ +++|||||.||+|||||+.+..
T Consensus 35 ~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~ 72 (340)
T 4aow_A 35 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDE 72 (340)
T ss_dssp CCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSS
T ss_pred CCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCC
Confidence 479999999999998 7899999999999999987654
No 4
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.06 E-value=2.4e-10 Score=76.25 Aligned_cols=48 Identities=15% Similarity=0.221 Sum_probs=40.5
Q ss_pred eeecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEec
Q psy11104 8 KIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILF 55 (70)
Q Consensus 8 ~I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~ 55 (70)
+...+|.+.|.+++|+|++++||+|+.||+|++||++++.....+..+
T Consensus 7 ~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~ 54 (304)
T 2ynn_A 7 KTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVT 54 (304)
T ss_dssp EEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred EeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeecc
Confidence 344578999999999999999999999999999999988765554433
No 5
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.05 E-value=2.2e-10 Score=74.40 Aligned_cols=36 Identities=14% Similarity=0.170 Sum_probs=33.2
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTV 46 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~ 46 (70)
.+|.+.|++++|+|||++|||||.||+|||||+.+.
T Consensus 281 ~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 281 KGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp CCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred cCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 379999999999999999999999999999998653
No 6
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.05 E-value=5.5e-10 Score=77.07 Aligned_cols=55 Identities=11% Similarity=-0.016 Sum_probs=43.4
Q ss_pred ecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEecccccccccC
Q psy11104 10 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQERNLQDKL 64 (70)
Q Consensus 10 ~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~~~~~~~ 64 (70)
..+|.+.|++|+|+|+|++||||+.||+|++||+++++....+..+.....+..|
T Consensus 123 ~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~ 177 (344)
T 4gqb_B 123 KYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAA 177 (344)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE
T ss_pred ccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEe
Confidence 3479999999999999999999999999999999988766555444333334344
No 7
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.04 E-value=1.1e-10 Score=80.96 Aligned_cols=56 Identities=18% Similarity=0.163 Sum_probs=47.5
Q ss_pred cCCCCCeEEEEEcC--------CCCEEEEEeCCCcEEEEECCCCCeEEEEEecccccccccCCC
Q psy11104 11 IPNNTKVNCLAWHQ--------NQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQERNLQDKLPP 66 (70)
Q Consensus 11 ~~~~~~V~~va~sp--------dg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~~~~~~~~~ 66 (70)
.+|.+.|++|+|+| ||++|||||+|++|||||++++.....+..++....+..|-|
T Consensus 133 ~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p 196 (393)
T 4gq1_A 133 SGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRP 196 (393)
T ss_dssp TSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEET
T ss_pred CCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECC
Confidence 47999999999998 789999999999999999998888777777766666666544
No 8
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.04 E-value=3.5e-10 Score=78.01 Aligned_cols=55 Identities=9% Similarity=0.169 Sum_probs=43.4
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEeccc-ccccccCCC
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQE-RNLQDKLPP 66 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~-~~~~~~~~~ 66 (70)
.|...|++++|||||++||+|+.||+|+|||+++++....+...|+ ...+..|-|
T Consensus 267 ~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSp 322 (365)
T 4h5i_A 267 NRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISP 322 (365)
T ss_dssp SSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECT
T ss_pred CCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECC
Confidence 6788999999999999999999999999999999876655433333 344555544
No 9
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.03 E-value=2.8e-10 Score=74.50 Aligned_cols=36 Identities=19% Similarity=0.370 Sum_probs=32.7
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~ 47 (70)
.|...|++++|+|||++|||||.||+|+|||+++++
T Consensus 304 ~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 304 AEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred CCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 588899999999999999999999999999999875
No 10
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.01 E-value=7.7e-10 Score=77.88 Aligned_cols=56 Identities=16% Similarity=0.134 Sum_probs=41.3
Q ss_pred ecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEecccccccccCCC
Q psy11104 10 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQERNLQDKLPP 66 (70)
Q Consensus 10 ~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~~~~~~~~~ 66 (70)
-.+|.+.|+||+|||||++||||+.||+|+|||. +++..-.+..+.....+.+|-|
T Consensus 12 L~GH~~~V~~~a~spdg~~las~~~d~~v~iWd~-~~~~~~~l~gh~~~V~~l~fsp 67 (577)
T 2ymu_A 12 LEAHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSP 67 (577)
T ss_dssp ECCCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECT
T ss_pred ECCCCCcEEEEEECCCCCEEEEEeCCCEEEEEEC-CCCEEEEEeCCCCCEEEEEECC
Confidence 4589999999999999999999999999999995 4554444443333334444433
No 11
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.01 E-value=3.2e-10 Score=76.20 Aligned_cols=42 Identities=7% Similarity=0.084 Sum_probs=32.2
Q ss_pred eeeecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCe
Q psy11104 7 KKIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSL 48 (70)
Q Consensus 7 ~~I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~ 48 (70)
+.+..+|.+.|++++|+|+|++|||||.||+|||||++++..
T Consensus 6 ~~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~ 47 (316)
T 3bg1_A 6 NTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQ 47 (316)
T ss_dssp --------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEE
T ss_pred eeecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCc
Confidence 345568999999999999999999999999999999987754
No 12
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.00 E-value=1.4e-09 Score=74.33 Aligned_cols=45 Identities=13% Similarity=0.204 Sum_probs=40.9
Q ss_pred ecCCCCCeEEEEEcCCCCEEEEEeCCCc-EEEEECCCCCeEEEEEe
Q psy11104 10 AIPNNTKVNCLAWHQNQGWIAVGGDDGL-LKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 10 ~~~~~~~V~~va~spdg~~LasGg~Dg~-IklWdi~~~~~~~~~~~ 54 (70)
..+|.+.|++++|+|+|++|||||.||+ |++||+++++....+..
T Consensus 191 ~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~ 236 (355)
T 3vu4_A 191 IKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRR 236 (355)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEEC
T ss_pred EEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEc
Confidence 4589999999999999999999999998 99999999988777763
No 13
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.00 E-value=6.9e-10 Score=73.79 Aligned_cols=38 Identities=16% Similarity=0.177 Sum_probs=34.7
Q ss_pred eecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Q psy11104 9 IAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTV 46 (70)
Q Consensus 9 I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~ 46 (70)
+..+|.+.|++++|+|+|++|||||.||+|+|||+.++
T Consensus 4 ~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~ 41 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGE 41 (297)
T ss_dssp ECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSS
T ss_pred eccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCC
Confidence 44589999999999999999999999999999999754
No 14
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.00 E-value=1.2e-09 Score=70.41 Aligned_cols=41 Identities=20% Similarity=0.235 Sum_probs=37.4
Q ss_pred eeeecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy11104 7 KKIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 7 ~~I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~ 47 (70)
.++..+|.+.|++++|+|++++||+|+.||.|++||+.++.
T Consensus 4 ~~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 44 (351)
T 3f3f_A 4 QPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDT 44 (351)
T ss_dssp CCEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSS
T ss_pred cccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCC
Confidence 45667899999999999999999999999999999998764
No 15
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.00 E-value=1.4e-09 Score=74.40 Aligned_cols=46 Identities=20% Similarity=0.318 Sum_probs=40.0
Q ss_pred eecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 9 IAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 9 I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
.-.+|.+.|+|++|+|++++|||||.||+|++||..++.....+..
T Consensus 59 ~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~ 104 (354)
T 2pbi_B 59 TLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTM 104 (354)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred EecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEec
Confidence 3458999999999999999999999999999999988876655544
No 16
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.96 E-value=2.7e-09 Score=72.13 Aligned_cols=47 Identities=17% Similarity=0.186 Sum_probs=40.3
Q ss_pred eecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEec
Q psy11104 9 IAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILF 55 (70)
Q Consensus 9 I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~ 55 (70)
.-.+|.+.|.+++|+|++++|||||.||+|++||+.++.....+..+
T Consensus 50 ~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~ 96 (340)
T 1got_B 50 TLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLR 96 (340)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECS
T ss_pred eecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecC
Confidence 34579999999999999999999999999999999888766555443
No 17
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=98.94 E-value=3.9e-09 Score=71.25 Aligned_cols=57 Identities=19% Similarity=0.114 Sum_probs=45.1
Q ss_pred ecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEecccccccccCCC
Q psy11104 10 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQERNLQDKLPP 66 (70)
Q Consensus 10 ~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~~~~~~~~~ 66 (70)
...|...|.+++|+|++.+|+|||.||+|++||+++++....+..+.....+..|-|
T Consensus 72 l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp 128 (343)
T 2xzm_R 72 LTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSP 128 (343)
T ss_dssp ECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECS
T ss_pred hccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECC
Confidence 357999999999999999999999999999999999887666555444444444433
No 18
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=98.93 E-value=2.4e-09 Score=71.93 Aligned_cols=54 Identities=7% Similarity=0.004 Sum_probs=43.1
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEecccccccccC
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQERNLQDKL 64 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~~~~~~~ 64 (70)
..|...|.+++|+|+|++|+|||.||+||+||+++++....+..+.....+..|
T Consensus 62 ~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~ 115 (319)
T 3frx_A 62 KGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDI 115 (319)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE
T ss_pred eCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEE
Confidence 479999999999999999999999999999999998766555544333333333
No 19
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=98.92 E-value=2.7e-09 Score=69.25 Aligned_cols=43 Identities=12% Similarity=0.265 Sum_probs=37.9
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
.|...|.+++|+|++++||||+.||+|++||+++++....+..
T Consensus 65 ~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~ 107 (318)
T 4ggc_A 65 QPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTS 107 (318)
T ss_dssp STTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred CCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecC
Confidence 5788899999999999999999999999999999876655443
No 20
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.91 E-value=4.7e-09 Score=69.14 Aligned_cols=47 Identities=17% Similarity=0.204 Sum_probs=39.8
Q ss_pred eeecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 8 KIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 8 ~I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
....+|.+.|++++|+|++++||+|+.||.|++|++.+++....+..
T Consensus 17 ~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~ 63 (312)
T 4ery_A 17 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG 63 (312)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred EEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhcc
Confidence 33457999999999999999999999999999999988876554433
No 21
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.91 E-value=2.7e-09 Score=73.17 Aligned_cols=54 Identities=15% Similarity=0.041 Sum_probs=42.6
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEecccccccccC
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQERNLQDKL 64 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~~~~~~~ 64 (70)
.+|.+.|++++|+|+|++||+|+.||+|++||+++++....+..+.....+.+|
T Consensus 136 ~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~ 189 (357)
T 4g56_B 136 YEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAA 189 (357)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE
T ss_pred CCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEE
Confidence 368899999999999999999999999999999988766655443333333333
No 22
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.91 E-value=3.6e-09 Score=70.48 Aligned_cols=53 Identities=21% Similarity=0.206 Sum_probs=43.1
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEeccccccccc
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQERNLQDK 63 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~~~~~~ 63 (70)
..|...|.+++|+|++++|||||.||+|++||+++.+..-.+..+.+...+..
T Consensus 225 ~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~ 277 (304)
T 2ynn_A 225 EGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIA 277 (304)
T ss_dssp ECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEE
T ss_pred CCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEE
Confidence 36899999999999999999999999999999999886666554444444444
No 23
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.90 E-value=2.4e-09 Score=74.51 Aligned_cols=45 Identities=13% Similarity=0.149 Sum_probs=39.0
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEec
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILF 55 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~ 55 (70)
.+|.+.|++++|+|++.+|||||.||+|++||+.+++....+..+
T Consensus 105 ~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h 149 (410)
T 1vyh_C 105 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGH 149 (410)
T ss_dssp ECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCC
T ss_pred cccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEecc
Confidence 478999999999999999999999999999999988765554433
No 24
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.90 E-value=3e-09 Score=72.03 Aligned_cols=54 Identities=15% Similarity=0.086 Sum_probs=42.9
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEecccccccccC
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQERNLQDKL 64 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~~~~~~~ 64 (70)
..|.+.|.+++|+|++++|++|+.||+|++||+++++....+..++....+.+|
T Consensus 245 ~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~ 298 (321)
T 3ow8_A 245 SGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKY 298 (321)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE
T ss_pred cCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEE
Confidence 368899999999999999999999999999999988776665544333333333
No 25
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=98.88 E-value=1.8e-09 Score=74.65 Aligned_cols=37 Identities=14% Similarity=0.170 Sum_probs=33.9
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~ 47 (70)
.+|.+.|++++|+|||++|||||.||+|||||+.+..
T Consensus 361 ~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~ 397 (420)
T 4gga_A 361 KGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELD 397 (420)
T ss_dssp CCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSS
T ss_pred cCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 3799999999999999999999999999999987654
No 26
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=98.88 E-value=4.2e-09 Score=72.81 Aligned_cols=43 Identities=12% Similarity=0.265 Sum_probs=37.6
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
.|...|+||+|+|+|++||+|+.||+|+|||+++++....+..
T Consensus 145 ~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~ 187 (420)
T 4gga_A 145 QPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTS 187 (420)
T ss_dssp STTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred CCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeC
Confidence 5778899999999999999999999999999998876555433
No 27
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.88 E-value=5.3e-09 Score=68.53 Aligned_cols=46 Identities=4% Similarity=-0.109 Sum_probs=40.0
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEecc
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQ 56 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~ 56 (70)
.+|.+.|.+++|+|++++||+|+.||.|++||+.+++....+..+.
T Consensus 29 ~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~ 74 (369)
T 3zwl_B 29 TGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHT 74 (369)
T ss_dssp ECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCS
T ss_pred EEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcC
Confidence 4799999999999999999999999999999999887666554443
No 28
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.85 E-value=7.8e-09 Score=69.96 Aligned_cols=54 Identities=13% Similarity=0.223 Sum_probs=42.2
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEecccccccccC
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQERNLQDKL 64 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~~~~~~~ 64 (70)
..|...|++++|+|++++||+|+.||+|++||+++......+..+.....+..|
T Consensus 203 ~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~ 256 (321)
T 3ow8_A 203 EGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAF 256 (321)
T ss_dssp CCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEE
T ss_pred cccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEE
Confidence 368899999999999999999999999999999988766554433333333333
No 29
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=98.85 E-value=8.2e-09 Score=69.33 Aligned_cols=43 Identities=23% Similarity=0.323 Sum_probs=38.1
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEE
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMII 53 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~ 53 (70)
..|.+.|++++|+|+|++||+|+.||+|++||+.+.+....+.
T Consensus 193 ~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~ 235 (319)
T 3frx_A 193 IGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLS 235 (319)
T ss_dssp CCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred cCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEec
Confidence 4789999999999999999999999999999999887655543
No 30
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=98.84 E-value=7.7e-09 Score=69.78 Aligned_cols=37 Identities=27% Similarity=0.417 Sum_probs=33.5
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~ 47 (70)
..|.+.|++++|+|+|++||+|+.||+|++||+.+..
T Consensus 210 ~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~ 246 (343)
T 2xzm_R 210 KAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLT 246 (343)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCS
T ss_pred cCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCc
Confidence 4789999999999999999999999999999995443
No 31
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=98.83 E-value=3.7e-09 Score=73.59 Aligned_cols=56 Identities=21% Similarity=0.326 Sum_probs=41.7
Q ss_pred cCCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCCeEEEEEeccc--ccccccCCC
Q psy11104 11 IPNNTKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTVSLTIMIILFQE--RNLQDKLPP 66 (70)
Q Consensus 11 ~~~~~~V~~va~spd-g~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~--~~~~~~~~~ 66 (70)
.+|...|+||+|||. +.+||+|+.||+|+|||+.+++....+...+| ...+.+|-|
T Consensus 116 ~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p 174 (435)
T 4e54_B 116 APFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNP 174 (435)
T ss_dssp EECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECS
T ss_pred CCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeC
Confidence 367889999999995 78999999999999999988775554443222 344445544
No 32
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=98.83 E-value=6.8e-09 Score=71.23 Aligned_cols=42 Identities=14% Similarity=0.274 Sum_probs=37.6
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEE
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMI 52 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~ 52 (70)
.+|.+.|++++|+|+|++|||||.||+|++||++++.....+
T Consensus 246 ~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~ 287 (380)
T 3iz6_a 246 HGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVY 287 (380)
T ss_dssp CCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEE
T ss_pred CCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEe
Confidence 478999999999999999999999999999999988765443
No 33
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.83 E-value=1.5e-08 Score=66.70 Aligned_cols=47 Identities=13% Similarity=0.201 Sum_probs=40.4
Q ss_pred ecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEecc
Q psy11104 10 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQ 56 (70)
Q Consensus 10 ~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~ 56 (70)
...|...|.+++|+|++++|++|+.||.|++||+++++....+..+.
T Consensus 61 ~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~ 107 (312)
T 4ery_A 61 ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHS 107 (312)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCS
T ss_pred hccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCC
Confidence 34788999999999999999999999999999999988666555443
No 34
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=98.83 E-value=1.8e-08 Score=64.75 Aligned_cols=40 Identities=20% Similarity=0.303 Sum_probs=35.9
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEE
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTI 50 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~ 50 (70)
..|.+.|++++|+|++++||+||.||.|++||+.+++..-
T Consensus 303 ~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~ 342 (351)
T 3f3f_A 303 DDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFK 342 (351)
T ss_dssp CTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEE
T ss_pred ecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchh
Confidence 4688999999999999999999999999999998876443
No 35
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.82 E-value=9.8e-09 Score=69.44 Aligned_cols=47 Identities=15% Similarity=0.120 Sum_probs=40.5
Q ss_pred eecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEec
Q psy11104 9 IAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILF 55 (70)
Q Consensus 9 I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~ 55 (70)
+...|.+.|.+++|+|++++|++|+.||+|++||+++++....+..+
T Consensus 134 ~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h 180 (420)
T 3vl1_A 134 IDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGH 180 (420)
T ss_dssp ETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECC
T ss_pred ecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCC
Confidence 33479999999999999999999999999999999988766655443
No 36
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.82 E-value=9.8e-09 Score=69.35 Aligned_cols=45 Identities=11% Similarity=0.026 Sum_probs=39.1
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEec
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILF 55 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~ 55 (70)
..|.+.|.+++|+|++++|++|+.||+|++||++++.....+..+
T Consensus 181 ~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h 225 (340)
T 1got_B 181 TGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGH 225 (340)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCC
T ss_pred cCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCC
Confidence 368999999999999999999999999999999988766554443
No 37
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.81 E-value=3.3e-09 Score=69.95 Aligned_cols=40 Identities=15% Similarity=0.165 Sum_probs=35.6
Q ss_pred eeecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy11104 8 KIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 8 ~I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~ 47 (70)
.+...|.+.|.+++|+|++++||+|+.||.|++||+....
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~ 44 (379)
T 3jrp_A 5 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGET 44 (379)
T ss_dssp CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTE
T ss_pred EEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCc
Confidence 3456799999999999999999999999999999997544
No 38
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.80 E-value=8.1e-09 Score=70.78 Aligned_cols=40 Identities=18% Similarity=0.126 Sum_probs=31.6
Q ss_pred CCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECCCCCeEEE
Q psy11104 12 PNNTKVNCLAWHQ-NQGWIAVGGDDGLLKVLKLDTVSLTIM 51 (70)
Q Consensus 12 ~~~~~V~~va~sp-dg~~LasGg~Dg~IklWdi~~~~~~~~ 51 (70)
+|.+.|++|+||| |+.+|||||.||+|++|++.+......
T Consensus 309 ~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~~~~~ 349 (357)
T 4g56_B 309 SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEGRTEN 349 (357)
T ss_dssp CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC-------
T ss_pred CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccc
Confidence 7999999999999 799999999999999999977654443
No 39
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=98.79 E-value=1.5e-08 Score=68.32 Aligned_cols=36 Identities=17% Similarity=0.290 Sum_probs=29.6
Q ss_pred ecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy11104 10 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDT 45 (70)
Q Consensus 10 ~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~ 45 (70)
...|.+.|.+++|+|+|++||+||.||+|++||++.
T Consensus 103 ~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~ 138 (330)
T 2hes_X 103 IEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDE 138 (330)
T ss_dssp EC----CEEEEEECTTSCEEEEEETTSCEEEEECCT
T ss_pred EcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccC
Confidence 347999999999999999999999999999999954
No 40
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=98.79 E-value=1.1e-08 Score=68.92 Aligned_cols=38 Identities=16% Similarity=0.282 Sum_probs=34.6
Q ss_pred ecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy11104 10 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 10 ~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~ 47 (70)
...|...|.+++|+|++.+|||||.||+||+||..++.
T Consensus 149 ~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~ 186 (330)
T 2hes_X 149 LQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDD 186 (330)
T ss_dssp ECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTE
T ss_pred eccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCC
Confidence 34789999999999999999999999999999987764
No 41
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.79 E-value=8.9e-09 Score=70.99 Aligned_cols=38 Identities=21% Similarity=0.218 Sum_probs=34.0
Q ss_pred cCCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEECCCCCe
Q psy11104 11 IPNNTKVNCLAWHQNQ-GWIAVGGDDGLLKVLKLDTVSL 48 (70)
Q Consensus 11 ~~~~~~V~~va~spdg-~~LasGg~Dg~IklWdi~~~~~ 48 (70)
..|.+.|++|+|+|++ ++|||||+||+|+|||+++++.
T Consensus 254 ~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~ 292 (344)
T 4gqb_B 254 AVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSEL 292 (344)
T ss_dssp ECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEE
T ss_pred cCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcE
Confidence 3689999999999997 6899999999999999988753
No 42
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.79 E-value=7.7e-09 Score=69.23 Aligned_cols=37 Identities=16% Similarity=0.267 Sum_probs=29.7
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~ 47 (70)
..|.+.|.+++|+|++++||+|+.||+|++||+.++.
T Consensus 52 ~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~ 88 (377)
T 3dwl_C 52 SDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDG 88 (377)
T ss_dssp CCCSSCEEEEEECTTTCCEEEEETTSSEEEC------
T ss_pred ecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCC
Confidence 3789999999999999999999999999999998876
No 43
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=98.79 E-value=1.7e-08 Score=66.07 Aligned_cols=41 Identities=10% Similarity=0.303 Sum_probs=35.7
Q ss_pred eecCCCCCeEEEEEcCC---CCEEEEEeCCCcEEEEECCCCCeE
Q psy11104 9 IAIPNNTKVNCLAWHQN---QGWIAVGGDDGLLKVLKLDTVSLT 49 (70)
Q Consensus 9 I~~~~~~~V~~va~spd---g~~LasGg~Dg~IklWdi~~~~~~ 49 (70)
+..+|.+.|++++|+|+ |++||+|+.||.|++||+++....
T Consensus 34 ~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~ 77 (368)
T 3mmy_A 34 VTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQT 77 (368)
T ss_dssp CSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCE
T ss_pred eccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCce
Confidence 44579999999999999 699999999999999999984433
No 44
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.78 E-value=8.4e-09 Score=71.72 Aligned_cols=55 Identities=13% Similarity=0.118 Sum_probs=44.2
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEecccccccccCC
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQERNLQDKLP 65 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~~~~~~~~ 65 (70)
.+|.+.|++++|+|+|++|++||.||+|++||+++++....+..+.....+..|-
T Consensus 335 ~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~ 389 (410)
T 1vyh_C 335 VGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFH 389 (410)
T ss_dssp ECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEEC
T ss_pred ECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEc
Confidence 3689999999999999999999999999999999887766665554444444443
No 45
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=98.78 E-value=4.1e-08 Score=66.56 Aligned_cols=40 Identities=15% Similarity=0.209 Sum_probs=35.5
Q ss_pred ecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeE
Q psy11104 10 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLT 49 (70)
Q Consensus 10 ~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~ 49 (70)
..+|.+.|.+++|+|+|++||+|+.||+|++||+.++...
T Consensus 57 ~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~ 96 (345)
T 3fm0_A 57 SEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFE 96 (345)
T ss_dssp CSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EE
T ss_pred ccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeE
Confidence 3579999999999999999999999999999999877643
No 46
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=98.78 E-value=2e-08 Score=73.20 Aligned_cols=38 Identities=8% Similarity=0.096 Sum_probs=34.6
Q ss_pred ecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy11104 10 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 10 ~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~ 47 (70)
...|.+.|++++|+|+|++||||+.||+|||||+.+++
T Consensus 55 ~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~ 92 (611)
T 1nr0_A 55 YTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTT 92 (611)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTT
T ss_pred ecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCc
Confidence 44799999999999999999999999999999997554
No 47
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=98.77 E-value=1.4e-08 Score=71.42 Aligned_cols=40 Identities=20% Similarity=0.175 Sum_probs=34.2
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEE
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIM 51 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~ 51 (70)
.+|.+.|.+++|+|||++||+|+.||+|+|||.. ++....
T Consensus 54 ~gh~~~V~~l~fspdg~~las~~~d~~i~vWd~~-~~~~~~ 93 (577)
T 2ymu_A 54 TGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-GQLLQT 93 (577)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-SCEEEE
T ss_pred eCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECC-CCEEEE
Confidence 4799999999999999999999999999999964 443333
No 48
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=98.77 E-value=2.2e-08 Score=73.50 Aligned_cols=55 Identities=15% Similarity=0.089 Sum_probs=43.9
Q ss_pred ecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEecccccccccC
Q psy11104 10 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQERNLQDKL 64 (70)
Q Consensus 10 ~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~~~~~~~ 64 (70)
...|.+.|.+++|+|+|++|+|||.||+|+|||+.++.....+..+.....+..|
T Consensus 426 ~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~ 480 (694)
T 3dm0_A 426 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAF 480 (694)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE
T ss_pred ecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEE
Confidence 3479999999999999999999999999999999988776665544433333333
No 49
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=98.75 E-value=2e-08 Score=73.15 Aligned_cols=43 Identities=14% Similarity=0.112 Sum_probs=38.0
Q ss_pred ecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEE
Q psy11104 10 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMI 52 (70)
Q Consensus 10 ~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~ 52 (70)
...|.+.|++++|+|||++|||||.||+|++||+.+++....+
T Consensus 186 l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~ 228 (611)
T 1nr0_A 186 FGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVF 228 (611)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEC
T ss_pred eccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeee
Confidence 3479999999999999999999999999999999888765443
No 50
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=98.75 E-value=8e-09 Score=67.66 Aligned_cols=39 Identities=26% Similarity=0.276 Sum_probs=34.5
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 16 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 16 ~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
.|.+++|+|++++||+|+.||.|++||+++++....+..
T Consensus 275 ~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 313 (368)
T 3mmy_A 275 AVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQ 313 (368)
T ss_dssp CEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCC
T ss_pred ceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecC
Confidence 799999999999999999999999999998876555443
No 51
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.75 E-value=1.1e-08 Score=68.76 Aligned_cols=43 Identities=16% Similarity=0.229 Sum_probs=36.9
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeE-EEEEe
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLT-IMIIL 54 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~-~~~~~ 54 (70)
.|...|.+++|+|+|.+||+|+.||.|++||+++++.. ..+..
T Consensus 168 ~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~ 211 (343)
T 3lrv_A 168 KSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPV 211 (343)
T ss_dssp CSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCC
T ss_pred CCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEec
Confidence 45668999999999999999999999999999988866 44443
No 52
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.75 E-value=1.9e-08 Score=64.85 Aligned_cols=47 Identities=13% Similarity=0.073 Sum_probs=39.5
Q ss_pred eeecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEec
Q psy11104 8 KIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILF 55 (70)
Q Consensus 8 ~I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~ 55 (70)
+.-..|.+.|.+++| |++++||+|+.||.|++||+.++.....+..+
T Consensus 12 ~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~ 58 (313)
T 3odt_A 12 ATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTG 58 (313)
T ss_dssp EEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEEC
T ss_pred HHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecC
Confidence 344589999999999 99999999999999999999887665555444
No 53
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.73 E-value=2.5e-08 Score=68.09 Aligned_cols=36 Identities=25% Similarity=0.337 Sum_probs=33.8
Q ss_pred cCCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECCCC
Q psy11104 11 IPNNTKVNCLAWHQ-NQGWIAVGGDDGLLKVLKLDTV 46 (70)
Q Consensus 11 ~~~~~~V~~va~sp-dg~~LasGg~Dg~IklWdi~~~ 46 (70)
.+|.+.|.+++|+| ++++||+|+.||+|++||+.++
T Consensus 78 ~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~ 114 (402)
T 2aq5_A 78 CGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDG 114 (402)
T ss_dssp CCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTT
T ss_pred ecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCC
Confidence 36899999999999 8999999999999999999887
No 54
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=98.72 E-value=2.5e-08 Score=68.66 Aligned_cols=40 Identities=10% Similarity=0.418 Sum_probs=34.2
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEec
Q psy11104 16 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILF 55 (70)
Q Consensus 16 ~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~ 55 (70)
.|++++|+|+|++||+|+.||+|++||+++++....+..+
T Consensus 125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h 164 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGH 164 (393)
T ss_dssp BEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccC
Confidence 4999999999999999999999999999988665544433
No 55
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.71 E-value=6.6e-08 Score=63.28 Aligned_cols=43 Identities=7% Similarity=-0.017 Sum_probs=38.3
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEE
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMII 53 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~ 53 (70)
..|.+.|.+++|+|++++|++|+.||.|++||+.+++....+.
T Consensus 71 ~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 113 (369)
T 3zwl_B 71 DGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK 113 (369)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE
T ss_pred hhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee
Confidence 3689999999999999999999999999999999887665544
No 56
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=98.71 E-value=4.7e-08 Score=66.24 Aligned_cols=38 Identities=18% Similarity=0.265 Sum_probs=34.8
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCe
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSL 48 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~ 48 (70)
..|.+.|.+++|+|++++||+|+.||+|++||++++..
T Consensus 102 ~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~ 139 (345)
T 3fm0_A 102 EGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDE 139 (345)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSC
T ss_pred cCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCC
Confidence 47999999999999999999999999999999987653
No 57
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=98.70 E-value=2.4e-08 Score=66.25 Aligned_cols=37 Identities=16% Similarity=0.173 Sum_probs=33.4
Q ss_pred cCCCCCeEEEEEcCC--CCEEEEEeCCCcEEEEECCCCC
Q psy11104 11 IPNNTKVNCLAWHQN--QGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 11 ~~~~~~V~~va~spd--g~~LasGg~Dg~IklWdi~~~~ 47 (70)
.+|.+.|++++|+|+ +++|||||.||+|++||++++.
T Consensus 50 ~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~ 88 (297)
T 2pm7_B 50 TGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGR 88 (297)
T ss_dssp CCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSC
T ss_pred ccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCc
Confidence 479999999999874 8999999999999999998764
No 58
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.70 E-value=4.5e-08 Score=65.04 Aligned_cols=42 Identities=19% Similarity=0.368 Sum_probs=36.9
Q ss_pred eeecCCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECCCCCeE
Q psy11104 8 KIAIPNNTKVNCLAWHQ-NQGWIAVGGDDGLLKVLKLDTVSLT 49 (70)
Q Consensus 8 ~I~~~~~~~V~~va~sp-dg~~LasGg~Dg~IklWdi~~~~~~ 49 (70)
.+...|.+.|++++|+| ++++||+|+.||.|++||+.++...
T Consensus 37 ~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~ 79 (408)
T 4a11_B 37 DVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQ 79 (408)
T ss_dssp EECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSS
T ss_pred eeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCccc
Confidence 34557999999999999 9999999999999999999876543
No 59
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.68 E-value=3.3e-08 Score=67.14 Aligned_cols=36 Identities=8% Similarity=0.300 Sum_probs=32.0
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~ 47 (70)
.+.+.|.+++|+|+|++||+|+.||.|+|||+.++.
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~ 61 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQEN 61 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC--
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCC
Confidence 467899999999999999999999999999998776
No 60
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.68 E-value=2.2e-08 Score=65.66 Aligned_cols=40 Identities=18% Similarity=0.229 Sum_probs=36.8
Q ss_pred eeecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy11104 8 KIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 8 ~I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~ 47 (70)
.+..+|.+.|.+++|+|++++||+|+.||.|++||+.++.
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~ 44 (342)
T 1yfq_A 5 QIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQA 44 (342)
T ss_dssp ECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTT
T ss_pred ecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCC
Confidence 4556899999999999999999999999999999998776
No 61
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.68 E-value=5.8e-08 Score=66.31 Aligned_cols=46 Identities=9% Similarity=0.069 Sum_probs=39.9
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEeccc
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQE 57 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~ 57 (70)
.|.+.|.+++|+|++..|++|+.||+|++||+++++....+..+..
T Consensus 152 ~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~ 197 (354)
T 2pbi_B 152 MHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGA 197 (354)
T ss_dssp ECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSS
T ss_pred ccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCC
Confidence 5889999999999999999999999999999999887666554433
No 62
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=98.67 E-value=2.8e-08 Score=69.14 Aligned_cols=45 Identities=11% Similarity=0.220 Sum_probs=39.6
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEec
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILF 55 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~ 55 (70)
.+|...|++++|+|+|++|++|+.||+|+|||+.++.....+..+
T Consensus 293 ~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~ 337 (435)
T 4e54_B 293 LPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPH 337 (435)
T ss_dssp CBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCC
T ss_pred eeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecc
Confidence 368899999999999999999999999999999988876665443
No 63
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=98.67 E-value=6.2e-08 Score=66.18 Aligned_cols=35 Identities=20% Similarity=0.278 Sum_probs=32.8
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy11104 13 NNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 13 ~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~ 47 (70)
|.+.|++++|+|+|++||+|+.||+|++||++...
T Consensus 239 h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 239 DRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp CCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCS
T ss_pred CCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCC
Confidence 89999999999999999999999999999997653
No 64
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.67 E-value=5.2e-08 Score=65.44 Aligned_cols=54 Identities=9% Similarity=0.174 Sum_probs=43.7
Q ss_pred CCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECCCCCeEEEEEecccccccccCC
Q psy11104 12 PNNTKVNCLAWHQ-NQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQERNLQDKLP 65 (70)
Q Consensus 12 ~~~~~V~~va~sp-dg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~~~~~~~~ 65 (70)
.|...|.+++|+| ++++|++|+.||+|++||+++++....+..+.....+..|-
T Consensus 260 ~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s 314 (416)
T 2pm9_A 260 GHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFA 314 (416)
T ss_dssp CCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEEC
T ss_pred CccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEEC
Confidence 6889999999999 89999999999999999999988776666554444444443
No 65
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.66 E-value=3.2e-08 Score=72.24 Aligned_cols=48 Identities=15% Similarity=0.230 Sum_probs=41.2
Q ss_pred eeecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEec
Q psy11104 8 KIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILF 55 (70)
Q Consensus 8 ~I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~ 55 (70)
+...+|.+.|.+++|||+|++||+|+.||.|++||+.++.....+..+
T Consensus 7 ~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~ 54 (814)
T 3mkq_A 7 KTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVT 54 (814)
T ss_dssp EEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred eeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecC
Confidence 344578999999999999999999999999999999998766665544
No 66
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.66 E-value=4.9e-08 Score=64.01 Aligned_cols=41 Identities=17% Similarity=0.319 Sum_probs=37.0
Q ss_pred CCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECCCCCeEEEE
Q psy11104 12 PNNTKVNCLAWHQ-NQGWIAVGGDDGLLKVLKLDTVSLTIMI 52 (70)
Q Consensus 12 ~~~~~V~~va~sp-dg~~LasGg~Dg~IklWdi~~~~~~~~~ 52 (70)
.|.+.|.+++|+| ++.+|++|+.||.|++||+++++....+
T Consensus 113 ~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 154 (366)
T 3k26_A 113 GHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIF 154 (366)
T ss_dssp SCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred CCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEe
Confidence 6899999999999 8999999999999999999988765554
No 67
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.66 E-value=6e-08 Score=65.31 Aligned_cols=44 Identities=30% Similarity=0.476 Sum_probs=39.0
Q ss_pred ecCCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEECCCCCeEEEEE
Q psy11104 10 AIPNNTKVNCLAWHQNQ-GWIAVGGDDGLLKVLKLDTVSLTIMII 53 (70)
Q Consensus 10 ~~~~~~~V~~va~spdg-~~LasGg~Dg~IklWdi~~~~~~~~~~ 53 (70)
..+|.+.|++++|+|++ ++||+|+.||.|++||+.++.....+.
T Consensus 69 ~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 113 (383)
T 3ei3_B 69 ASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQ 113 (383)
T ss_dssp ECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEEC
T ss_pred ccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeee
Confidence 35789999999999998 999999999999999999887766554
No 68
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=98.65 E-value=5.6e-08 Score=66.92 Aligned_cols=47 Identities=19% Similarity=0.149 Sum_probs=40.4
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEeccc
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQE 57 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~ 57 (70)
.+|...|.+++|+|++++|++||.||.|++||+++++....+..+..
T Consensus 307 ~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~ 353 (393)
T 1erj_A 307 IGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRN 353 (393)
T ss_dssp ECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSS
T ss_pred ecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCC
Confidence 36889999999999999999999999999999999887666554433
No 69
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.64 E-value=3.5e-08 Score=65.21 Aligned_cols=38 Identities=13% Similarity=0.252 Sum_probs=34.9
Q ss_pred ecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy11104 10 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 10 ~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~ 47 (70)
...|.+.|.+++|+|++++||+|+.||.|++||+.+++
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~ 41 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNK 41 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTE
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCc
Confidence 34588999999999999999999999999999998886
No 70
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=98.63 E-value=5.8e-08 Score=69.14 Aligned_cols=42 Identities=19% Similarity=0.227 Sum_probs=36.3
Q ss_pred cCCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCCeEEEE
Q psy11104 11 IPNNTKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTVSLTIMI 52 (70)
Q Consensus 11 ~~~~~~V~~va~spd-g~~LasGg~Dg~IklWdi~~~~~~~~~ 52 (70)
..|.+.|.+++|+|+ +.+||+|+.||+|++||++++......
T Consensus 146 ~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~ 188 (434)
T 2oit_A 146 KDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCAT 188 (434)
T ss_dssp CSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEE
T ss_pred CCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeec
Confidence 358899999999998 899999999999999999988554433
No 71
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=98.63 E-value=5.2e-08 Score=65.31 Aligned_cols=37 Identities=14% Similarity=0.125 Sum_probs=33.5
Q ss_pred cCCCCCeEEEEEcC--CCCEEEEEeCCCcEEEEECCCCC
Q psy11104 11 IPNNTKVNCLAWHQ--NQGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 11 ~~~~~~V~~va~sp--dg~~LasGg~Dg~IklWdi~~~~ 47 (70)
.+|.+.|++++|+| ++++|||||.||+|++||++++.
T Consensus 54 ~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~ 92 (316)
T 3bg1_A 54 RGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGT 92 (316)
T ss_dssp ECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSC
T ss_pred cCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCc
Confidence 47999999999986 38999999999999999998875
No 72
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=98.63 E-value=4e-08 Score=67.23 Aligned_cols=38 Identities=16% Similarity=0.354 Sum_probs=34.4
Q ss_pred eeecCCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECCC
Q psy11104 8 KIAIPNNTKVNCLAWHQ-NQGWIAVGGDDGLLKVLKLDT 45 (70)
Q Consensus 8 ~I~~~~~~~V~~va~sp-dg~~LasGg~Dg~IklWdi~~ 45 (70)
++...|.+.|++++|+| ++++||+||.||+|++||+.+
T Consensus 57 ~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~ 95 (437)
T 3gre_A 57 TLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKE 95 (437)
T ss_dssp EECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHH
T ss_pred eeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcc
Confidence 44467899999999999 999999999999999999866
No 73
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.63 E-value=1e-07 Score=65.34 Aligned_cols=45 Identities=18% Similarity=0.288 Sum_probs=39.4
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEec
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILF 55 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~ 55 (70)
..|.+.|.+++|+|++++|++|+.||.|++||++++.....+..+
T Consensus 214 ~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~ 258 (401)
T 4aez_A 214 QGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNH 258 (401)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCC
T ss_pred cCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCC
Confidence 368999999999999999999999999999999988766655443
No 74
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.63 E-value=1.3e-07 Score=63.63 Aligned_cols=41 Identities=12% Similarity=0.215 Sum_probs=36.3
Q ss_pred eeecCCCCCeEEEEEcC--CCCEEEEEeCCCcEEEEECCCCCe
Q psy11104 8 KIAIPNNTKVNCLAWHQ--NQGWIAVGGDDGLLKVLKLDTVSL 48 (70)
Q Consensus 8 ~I~~~~~~~V~~va~sp--dg~~LasGg~Dg~IklWdi~~~~~ 48 (70)
.+..+|.+.|.+++|+| +++++++|+.||+|++||+++++.
T Consensus 119 ~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~ 161 (343)
T 3lrv_A 119 EIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQ 161 (343)
T ss_dssp EEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCE
T ss_pred EeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcE
Confidence 45557788999999999 999999999999999999998877
No 75
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.62 E-value=7e-08 Score=64.61 Aligned_cols=41 Identities=17% Similarity=0.222 Sum_probs=37.8
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEE
Q psy11104 13 NNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMII 53 (70)
Q Consensus 13 ~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~ 53 (70)
|...|.+++|+|++++|++|+.||.|++||+++++....+.
T Consensus 290 ~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 330 (397)
T 1sq9_A 290 HSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLN 330 (397)
T ss_dssp BSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred cCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEe
Confidence 88999999999999999999999999999999987766655
No 76
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.62 E-value=8.4e-08 Score=73.57 Aligned_cols=55 Identities=24% Similarity=0.231 Sum_probs=44.0
Q ss_pred ecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEecccccccccC
Q psy11104 10 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQERNLQDKL 64 (70)
Q Consensus 10 ~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~~~~~~~ 64 (70)
..+|.+.|++++|+|+|++||+|+.||+|++||+.++.....+..+.....+..|
T Consensus 611 ~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~ 665 (1249)
T 3sfz_A 611 VRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAF 665 (1249)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE
T ss_pred EecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEE
Confidence 3479999999999999999999999999999999998877666544333333333
No 77
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.61 E-value=6.1e-08 Score=66.13 Aligned_cols=41 Identities=20% Similarity=0.401 Sum_probs=37.0
Q ss_pred CCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEECCCCCeEEEE
Q psy11104 12 PNNTKVNCLAWHQNQ-GWIAVGGDDGLLKVLKLDTVSLTIMI 52 (70)
Q Consensus 12 ~~~~~V~~va~spdg-~~LasGg~Dg~IklWdi~~~~~~~~~ 52 (70)
.|.+.|.+++|+|++ .+|++|+.||+|++||+++++....+
T Consensus 129 ~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 170 (402)
T 2aq5_A 129 GHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTL 170 (402)
T ss_dssp CCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred CCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEE
Confidence 689999999999997 69999999999999999988766555
No 78
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.60 E-value=1.2e-07 Score=62.48 Aligned_cols=38 Identities=16% Similarity=0.157 Sum_probs=34.8
Q ss_pred cCCCCCeEEEEEcCC--CCEEEEEeCCCcEEEEECCCCCe
Q psy11104 11 IPNNTKVNCLAWHQN--QGWIAVGGDDGLLKVLKLDTVSL 48 (70)
Q Consensus 11 ~~~~~~V~~va~spd--g~~LasGg~Dg~IklWdi~~~~~ 48 (70)
..|.+.|.+++|+|+ +++|++|+.||.|++||+.+++.
T Consensus 52 ~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~ 91 (379)
T 3jrp_A 52 TGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRW 91 (379)
T ss_dssp CCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEE
T ss_pred cCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCce
Confidence 378999999999987 99999999999999999998863
No 79
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.59 E-value=1.1e-07 Score=63.56 Aligned_cols=41 Identities=12% Similarity=0.190 Sum_probs=36.5
Q ss_pred eeeeeecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy11104 5 LSKKIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 5 ~~~~I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~ 47 (70)
...++..+|.+.|++++|+| ++||+|+.||+|++||+.++.
T Consensus 7 ~~~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~ 47 (397)
T 1sq9_A 7 ATANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLD 47 (397)
T ss_dssp EEEEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCT
T ss_pred hhhhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcc
Confidence 44556678999999999999 899999999999999998887
No 80
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.59 E-value=4.3e-08 Score=65.55 Aligned_cols=40 Identities=30% Similarity=0.404 Sum_probs=35.0
Q ss_pred eeeeecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy11104 6 SKKIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDT 45 (70)
Q Consensus 6 ~~~I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~ 45 (70)
.+.+..+|.+.|.+++|+|++++||+|+.||+|++||++.
T Consensus 138 ~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 177 (377)
T 3dwl_C 138 SKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYV 177 (377)
T ss_dssp CEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECC
T ss_pred eeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEe
Confidence 3445556999999999999999999999999999999853
No 81
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.59 E-value=6.8e-08 Score=64.18 Aligned_cols=40 Identities=13% Similarity=0.072 Sum_probs=33.3
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEE
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTI 50 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~ 50 (70)
.+|.+.|.+++|+|++++|++|+.||.|++||+++.+..-
T Consensus 331 ~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~ 370 (408)
T 4a11_B 331 KGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVP 370 (408)
T ss_dssp CCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC-----
T ss_pred ccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccC
Confidence 3688999999999999999999999999999998876543
No 82
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=98.59 E-value=1.5e-07 Score=64.34 Aligned_cols=41 Identities=10% Similarity=0.161 Sum_probs=36.4
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEE
Q psy11104 13 NNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMII 53 (70)
Q Consensus 13 ~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~ 53 (70)
|.+.|.+++|+|++++|++|+.||+|++||+++++....+.
T Consensus 213 h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 253 (437)
T 3gre_A 213 RHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWS 253 (437)
T ss_dssp GGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEB
T ss_pred CCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEe
Confidence 78999999999999999999999999999999876555443
No 83
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.59 E-value=2.1e-07 Score=61.39 Aligned_cols=39 Identities=28% Similarity=0.388 Sum_probs=34.9
Q ss_pred eeeeecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy11104 6 SKKIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLD 44 (70)
Q Consensus 6 ~~~I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~ 44 (70)
...+..+|...|.+++|+|++++|++|+.||.|++||++
T Consensus 134 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~ 172 (372)
T 1k8k_C 134 CKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAY 172 (372)
T ss_dssp EEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECC
T ss_pred eeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcc
Confidence 445567889999999999999999999999999999964
No 84
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.58 E-value=1.5e-07 Score=61.68 Aligned_cols=47 Identities=15% Similarity=0.268 Sum_probs=37.4
Q ss_pred eeeecCCCCCeEEEEEcCCCC-EEEEEeC---CCcEEEEECCCCCeEEEEE
Q psy11104 7 KKIAIPNNTKVNCLAWHQNQG-WIAVGGD---DGLLKVLKLDTVSLTIMII 53 (70)
Q Consensus 7 ~~I~~~~~~~V~~va~spdg~-~LasGg~---Dg~IklWdi~~~~~~~~~~ 53 (70)
.++..+|.+.|.+++|+|++. ++++|+. ||.|++||+.+++......
T Consensus 11 ~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~ 61 (357)
T 3i2n_A 11 AHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLRE 61 (357)
T ss_dssp EEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEE
T ss_pred hhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceee
Confidence 456678999999999999985 5667776 9999999999887654443
No 85
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.58 E-value=2e-07 Score=63.82 Aligned_cols=46 Identities=15% Similarity=0.366 Sum_probs=39.4
Q ss_pred eecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 9 IAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 9 I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
+...|.+.|.+++|+|++++||+|+.||.|++||+.+++....+..
T Consensus 129 ~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 174 (401)
T 4aez_A 129 AETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAG 174 (401)
T ss_dssp EECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred eecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecC
Confidence 3445889999999999999999999999999999998876655543
No 86
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.58 E-value=9.7e-08 Score=62.55 Aligned_cols=41 Identities=17% Similarity=0.298 Sum_probs=35.5
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 14 NTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 14 ~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
...|.+++|+|++++|++|+.||.|++||+.+++....+..
T Consensus 251 ~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~ 291 (342)
T 1yfq_A 251 AYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAK 291 (342)
T ss_dssp CCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCC
T ss_pred ceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhc
Confidence 44999999999999999999999999999998876555433
No 87
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.58 E-value=1.5e-07 Score=63.60 Aligned_cols=43 Identities=14% Similarity=0.084 Sum_probs=38.2
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEE
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMII 53 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~ 53 (70)
..|.+.|.+++|+|++++|++|+.||+|++||+++++....+.
T Consensus 178 ~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~ 220 (420)
T 3vl1_A 178 IGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFN 220 (420)
T ss_dssp ECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred cCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEee
Confidence 3689999999999999999999999999999999887665544
No 88
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.57 E-value=1.5e-07 Score=60.64 Aligned_cols=45 Identities=22% Similarity=0.251 Sum_probs=38.3
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEecc
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQ 56 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~ 56 (70)
..|.+.|.+++|+|++ .|++|+.||.|++||+++++....+..+.
T Consensus 222 ~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~ 266 (313)
T 3odt_A 222 EGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPA 266 (313)
T ss_dssp ECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSS
T ss_pred hcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccC
Confidence 3688999999999999 68999999999999999988766655443
No 89
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.56 E-value=1.5e-07 Score=72.13 Aligned_cols=55 Identities=18% Similarity=0.175 Sum_probs=45.0
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEecccccccccCCC
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQERNLQDKLPP 66 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~~~~~~~~~ 66 (70)
.|.+.|.+++|+|+|++||+|+.||+|++||+.+++....+..+.....+..|.|
T Consensus 655 ~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~ 709 (1249)
T 3sfz_A 655 AHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTN 709 (1249)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECS
T ss_pred cCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEec
Confidence 6899999999999999999999999999999999987776665544444444433
No 90
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.56 E-value=1e-07 Score=64.00 Aligned_cols=35 Identities=29% Similarity=0.449 Sum_probs=32.8
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDT 45 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~ 45 (70)
..|.+.|.+++|+|++++||+|+.||.|++||+.+
T Consensus 64 ~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~ 98 (416)
T 2pm9_A 64 LQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNE 98 (416)
T ss_dssp CCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSS
T ss_pred EecCCceEEEEECCCCCeEEEEccCCeEEEeeccc
Confidence 36888999999999999999999999999999987
No 91
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.54 E-value=1.3e-07 Score=64.16 Aligned_cols=37 Identities=11% Similarity=0.263 Sum_probs=34.6
Q ss_pred CCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEECCCCCe
Q psy11104 12 PNNTKVNCLAWHQNQ-GWIAVGGDDGLLKVLKLDTVSL 48 (70)
Q Consensus 12 ~~~~~V~~va~spdg-~~LasGg~Dg~IklWdi~~~~~ 48 (70)
.|...|++++|+|++ ++||+|+.||+|++||++++..
T Consensus 224 ~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~ 261 (447)
T 3dw8_B 224 ELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASAL 261 (447)
T ss_dssp GCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSS
T ss_pred ccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcc
Confidence 688999999999998 9999999999999999988775
No 92
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.54 E-value=1.3e-07 Score=68.98 Aligned_cols=53 Identities=19% Similarity=0.228 Sum_probs=43.5
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEecccccccccC
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQERNLQDKL 64 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~~~~~~~ 64 (70)
.|.+.|.+++|+|++++||+|+.||.|++||+.+++....+..+.....+..|
T Consensus 53 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~ 105 (814)
T 3mkq_A 53 VTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAV 105 (814)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE
T ss_pred cCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEE
Confidence 68999999999999999999999999999999999877776554433333333
No 93
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.53 E-value=1.5e-07 Score=61.60 Aligned_cols=54 Identities=17% Similarity=0.285 Sum_probs=41.9
Q ss_pred CCCCeEEEEEcCC----CCEEEEEeCCCcEEEEECCCCCeEEEEEecccccccccCCC
Q psy11104 13 NNTKVNCLAWHQN----QGWIAVGGDDGLLKVLKLDTVSLTIMIILFQERNLQDKLPP 66 (70)
Q Consensus 13 ~~~~V~~va~spd----g~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~~~~~~~~~ 66 (70)
|...|.+++|+|+ |.+||+|+.||.|++||+.+++....+..+.....+.+|-|
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~ 125 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHP 125 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECS
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECC
Confidence 7788999999999 67999999999999999998887666554444444444433
No 94
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.53 E-value=3.2e-07 Score=59.42 Aligned_cols=44 Identities=16% Similarity=0.065 Sum_probs=38.0
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
..|...|.+++|+|++++|++|+.||.|++||+++++....+..
T Consensus 138 ~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~ 181 (337)
T 1gxr_A 138 TSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG 181 (337)
T ss_dssp ECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred ccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeec
Confidence 36788999999999999999999999999999998866555443
No 95
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.53 E-value=1.6e-07 Score=61.52 Aligned_cols=36 Identities=14% Similarity=0.327 Sum_probs=31.9
Q ss_pred CCCCCeEEEEEcCCCCEEE-EEeCCCcEEEEECCCCC
Q psy11104 12 PNNTKVNCLAWHQNQGWIA-VGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~La-sGg~Dg~IklWdi~~~~ 47 (70)
.|.+.|.+++|+|++++|| ||+.||.|++||+.+.+
T Consensus 319 ~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 319 LSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp CCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC--
T ss_pred cCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCcc
Confidence 6889999999999999998 89999999999987654
No 96
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.51 E-value=2.1e-07 Score=64.05 Aligned_cols=45 Identities=7% Similarity=0.109 Sum_probs=39.2
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEec
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILF 55 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~ 55 (70)
.+|.+.|.+++|+|++++|++|+.||+|++||+++++....+..+
T Consensus 307 ~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h 351 (464)
T 3v7d_B 307 SGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGH 351 (464)
T ss_dssp CCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCC
Confidence 368899999999999999999999999999999988766555443
No 97
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.51 E-value=1.2e-07 Score=66.45 Aligned_cols=42 Identities=17% Similarity=0.247 Sum_probs=37.4
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEE
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMI 52 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~ 52 (70)
..|...|.+++|+|+|++||+|+.||.|++||+++++....+
T Consensus 485 ~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~ 526 (615)
T 1pgu_A 485 TPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSR 526 (615)
T ss_dssp SCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECC
T ss_pred CCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEe
Confidence 468899999999999999999999999999999988765443
No 98
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=98.51 E-value=1.7e-07 Score=68.76 Aligned_cols=41 Identities=20% Similarity=0.209 Sum_probs=36.8
Q ss_pred ecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEE
Q psy11104 10 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTI 50 (70)
Q Consensus 10 ~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~ 50 (70)
...|.+.|++++|+|+|++|+|||.||+|++||+++++...
T Consensus 557 ~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~ 597 (694)
T 3dm0_A 557 LAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLY 597 (694)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEE
T ss_pred EcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEE
Confidence 34799999999999999999999999999999998886543
No 99
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.51 E-value=3.5e-07 Score=59.28 Aligned_cols=37 Identities=14% Similarity=0.212 Sum_probs=33.5
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCe
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSL 48 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~ 48 (70)
+|...|.+++|+|++++|++|+.||.|++||+++++.
T Consensus 95 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~ 131 (337)
T 1gxr_A 95 NRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTP 131 (337)
T ss_dssp CTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCc
Confidence 6888999999999999999999999999999998874
No 100
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=98.50 E-value=7.3e-08 Score=74.39 Aligned_cols=35 Identities=14% Similarity=0.185 Sum_probs=33.2
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTV 46 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~ 46 (70)
+|...|++|+|+|||++||+|+.||+|+|||++++
T Consensus 486 ~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~ 520 (902)
T 2oaj_A 486 AKELAVDKISFAAETLELAVSIETGDVVLFKYEVN 520 (902)
T ss_dssp SSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEEC
T ss_pred CCCCceeEEEecCCCCeEEEEecCcEEEEEEecCc
Confidence 78889999999999999999999999999998766
No 101
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.50 E-value=2.5e-07 Score=61.55 Aligned_cols=40 Identities=28% Similarity=0.545 Sum_probs=32.5
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEE
Q psy11104 13 NNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMII 53 (70)
Q Consensus 13 ~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~ 53 (70)
|.+.|.+++|+|++++||+|+.||.|++|| .++.....+.
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~ 146 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLN 146 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEEC
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeecc
Confidence 577999999999999999999999999999 4444444433
No 102
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=98.47 E-value=2.5e-07 Score=71.47 Aligned_cols=38 Identities=18% Similarity=0.121 Sum_probs=34.0
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeE
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLT 49 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~ 49 (70)
.|...|++++|+|+|++||||++||+|++||+++++..
T Consensus 209 ~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~ 246 (902)
T 2oaj_A 209 KRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMI 246 (902)
T ss_dssp CBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEE
T ss_pred ccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEE
Confidence 34678999999999999999999999999999887654
No 103
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=98.46 E-value=1.1e-07 Score=68.94 Aligned_cols=32 Identities=19% Similarity=0.380 Sum_probs=26.9
Q ss_pred CCCCCeE-EEEEcCCCCEEEEEeCCCcEEEEEC
Q psy11104 12 PNNTKVN-CLAWHQNQGWIAVGGDDGLLKVLKL 43 (70)
Q Consensus 12 ~~~~~V~-~va~spdg~~LasGg~Dg~IklWdi 43 (70)
+|...+. +++|||||++||||+.|++|||||+
T Consensus 323 gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 323 PVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp CC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred CCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 5666555 6999999999999999999999995
No 104
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.44 E-value=2.8e-07 Score=63.45 Aligned_cols=42 Identities=14% Similarity=0.174 Sum_probs=36.7
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEE
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMII 53 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~ 53 (70)
..|.+.|.+++|+|++ +|++|+.||+|++||+++++....+.
T Consensus 159 ~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~ 200 (464)
T 3v7d_B 159 SGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFE 200 (464)
T ss_dssp CCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred eCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEEC
Confidence 3799999999999988 99999999999999999887655444
No 105
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.44 E-value=1.6e-07 Score=65.84 Aligned_cols=38 Identities=18% Similarity=0.400 Sum_probs=34.7
Q ss_pred CCCCeEEEEEcC----------CCCEEEEEeCCCcEEEEECCCCCeEE
Q psy11104 13 NNTKVNCLAWHQ----------NQGWIAVGGDDGLLKVLKLDTVSLTI 50 (70)
Q Consensus 13 ~~~~V~~va~sp----------dg~~LasGg~Dg~IklWdi~~~~~~~ 50 (70)
|...|++++|+| ++++||+|+.||.|++||++++...+
T Consensus 530 h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~ 577 (615)
T 1pgu_A 530 RTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKII 577 (615)
T ss_dssp CSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCE
T ss_pred CCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceec
Confidence 899999999999 99999999999999999999874333
No 106
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.43 E-value=4.2e-07 Score=63.27 Aligned_cols=42 Identities=17% Similarity=0.234 Sum_probs=34.8
Q ss_pred CCCCCeEEEEEcCCCCEE-EEEeCCCcEEEEECC--CCCeEEEEE
Q psy11104 12 PNNTKVNCLAWHQNQGWI-AVGGDDGLLKVLKLD--TVSLTIMII 53 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~L-asGg~Dg~IklWdi~--~~~~~~~~~ 53 (70)
+|.+.|.+++|+|+|++| |+|+.||+|++||+. ++...-.+.
T Consensus 100 ~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~ 144 (450)
T 2vdu_B 100 PIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRK 144 (450)
T ss_dssp CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEE
T ss_pred ccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeee
Confidence 466789999999999996 999999999999998 665544443
No 107
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.42 E-value=5.9e-07 Score=59.75 Aligned_cols=44 Identities=7% Similarity=0.084 Sum_probs=38.1
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
..|...|.+++|+|++++|++|+.||.|++||+.+++....+..
T Consensus 146 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 189 (425)
T 1r5m_A 146 NFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFEL 189 (425)
T ss_dssp CCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECC
T ss_pred cCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeec
Confidence 36889999999999999999999999999999988876554433
No 108
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.42 E-value=7.2e-07 Score=59.98 Aligned_cols=43 Identities=21% Similarity=0.186 Sum_probs=34.5
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEec
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILF 55 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~ 55 (70)
.|...|.+++|+|++++|++|+.||.|++||++ ++....+..+
T Consensus 161 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~h 203 (383)
T 3ei3_B 161 SWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GHEIFKEKLH 203 (383)
T ss_dssp CSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SCEEEEEECS
T ss_pred CCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CCEEEEeccC
Confidence 345789999999999999999999999999994 4444444433
No 109
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.42 E-value=5.4e-07 Score=62.62 Aligned_cols=38 Identities=24% Similarity=0.490 Sum_probs=33.7
Q ss_pred CCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEECCCCCeE
Q psy11104 12 PNNTKVNCLAWHQNQG-WIAVGGDDGLLKVLKLDTVSLT 49 (70)
Q Consensus 12 ~~~~~V~~va~spdg~-~LasGg~Dg~IklWdi~~~~~~ 49 (70)
.|.+.|++++|+|+++ +||+|+.||+|++||+++....
T Consensus 275 ~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~ 313 (430)
T 2xyi_A 275 AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK 313 (430)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSC
T ss_pred cCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCC
Confidence 7889999999999986 7999999999999999885443
No 110
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=98.42 E-value=1.1e-07 Score=71.31 Aligned_cols=41 Identities=15% Similarity=0.146 Sum_probs=33.3
Q ss_pred eeecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCe
Q psy11104 8 KIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSL 48 (70)
Q Consensus 8 ~I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~ 48 (70)
.+..+|.+.|++++|+|+|++||+|+.||+|++||+.++..
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~ 43 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETH 43 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEE
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCC
Confidence 35568999999999999999999999999999999985543
No 111
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=98.41 E-value=4.3e-07 Score=65.81 Aligned_cols=44 Identities=11% Similarity=-0.063 Sum_probs=35.7
Q ss_pred CCCCCeEEEEEcC---CCCEEEEEeCCCcEEEEECCCCCeEEEEEec
Q psy11104 12 PNNTKVNCLAWHQ---NQGWIAVGGDDGLLKVLKLDTVSLTIMIILF 55 (70)
Q Consensus 12 ~~~~~V~~va~sp---dg~~LasGg~Dg~IklWdi~~~~~~~~~~~~ 55 (70)
.|...++.++|+| ++++|||||.|++|||||+++++..-++..+
T Consensus 176 ~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~ 222 (356)
T 2w18_A 176 LMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHID 222 (356)
T ss_dssp ECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred cCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCC
Confidence 4566677777777 5688999999999999999999877776543
No 112
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.40 E-value=4.5e-07 Score=66.68 Aligned_cols=55 Identities=7% Similarity=0.099 Sum_probs=39.7
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEecccc-cccc--cCCC
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQER-NLQD--KLPP 66 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~-~~~~--~~~~ 66 (70)
..|.+.|.|++|+|+ ..||+|+.||+|++||++++.........++. ..+. .+||
T Consensus 263 ~~h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~ 320 (524)
T 2j04_B 263 SLADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSD 320 (524)
T ss_dssp CCTTTCEEEEEESSS-SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCT
T ss_pred EcCCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCC
Confidence 358899999999986 48999999999999999877544433333333 2332 4565
No 113
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=98.39 E-value=2.2e-07 Score=64.19 Aligned_cols=44 Identities=9% Similarity=0.106 Sum_probs=33.8
Q ss_pred cCCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 11 IPNNTKVNCLAWHQNQ-GWIAVGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 11 ~~~~~~V~~va~spdg-~~LasGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
..|.+.|.+++|+|++ .+|++|+.||+|++||++++........
T Consensus 183 ~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~ 227 (393)
T 4gq1_A 183 YPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQ 227 (393)
T ss_dssp EECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC-------
T ss_pred cCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccc
Confidence 3688999999999996 5899999999999999998876554433
No 114
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.39 E-value=3.5e-07 Score=69.90 Aligned_cols=32 Identities=28% Similarity=0.635 Sum_probs=30.5
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy11104 16 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 16 ~V~~va~spdg~~LasGg~Dg~IklWdi~~~~ 47 (70)
.|.+++|||||++||+|++||+|+|||++++.
T Consensus 131 sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~ 162 (588)
T 2j04_A 131 TYHCFEWNPIESSIVVGNEDGELQFFSIRKNS 162 (588)
T ss_dssp CEEEEEECSSSSCEEEEETTSEEEEEECCCCT
T ss_pred cEEEEEEcCCCCEEEEEcCCCEEEEEECCCCc
Confidence 59999999999999999999999999999875
No 115
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.38 E-value=1.4e-06 Score=60.63 Aligned_cols=44 Identities=9% Similarity=-0.010 Sum_probs=38.6
Q ss_pred ecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 10 AIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 10 ~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
..+|.+.|.+++|+ ++++|++|+.||+|++||+++++....+..
T Consensus 237 ~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~ 280 (450)
T 2vdu_B 237 LFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDY 280 (450)
T ss_dssp CCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEEC
T ss_pred ecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecc
Confidence 34789999999999 999999999999999999999887665543
No 116
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=98.38 E-value=6.5e-07 Score=63.67 Aligned_cols=33 Identities=21% Similarity=0.419 Sum_probs=31.5
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLD 44 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~ 44 (70)
+|...|.+++|+|+|++||+|+.||+|++||.+
T Consensus 190 ~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 190 PSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp CGGGCEEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred CCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC
Confidence 578899999999999999999999999999988
No 117
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=98.34 E-value=1.1e-06 Score=65.98 Aligned_cols=38 Identities=16% Similarity=0.157 Sum_probs=35.0
Q ss_pred cCCCCCeEEEEEcCC--CCEEEEEeCCCcEEEEECCCCCe
Q psy11104 11 IPNNTKVNCLAWHQN--QGWIAVGGDDGLLKVLKLDTVSL 48 (70)
Q Consensus 11 ~~~~~~V~~va~spd--g~~LasGg~Dg~IklWdi~~~~~ 48 (70)
..|.+.|.+++|+|+ +++|++|+.||.|++||+.+++.
T Consensus 50 ~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~ 89 (753)
T 3jro_A 50 TGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRW 89 (753)
T ss_dssp CCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEE
T ss_pred cCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcc
Confidence 479999999999998 99999999999999999998763
No 118
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.27 E-value=3.3e-06 Score=58.65 Aligned_cols=37 Identities=19% Similarity=0.261 Sum_probs=33.7
Q ss_pred ecCCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEECCCC
Q psy11104 10 AIPNNTKVNCLAWHQ-NQGWIAVGGDDGLLKVLKLDTV 46 (70)
Q Consensus 10 ~~~~~~~V~~va~sp-dg~~LasGg~Dg~IklWdi~~~ 46 (70)
...|.+.|.+++|+| ++.+||+|+.||.|++||+++.
T Consensus 227 ~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~ 264 (430)
T 2xyi_A 227 FTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNN 264 (430)
T ss_dssp ECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCS
T ss_pred ecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCC
Confidence 347899999999999 5889999999999999999876
No 119
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.23 E-value=3.6e-06 Score=58.14 Aligned_cols=43 Identities=21% Similarity=0.366 Sum_probs=36.3
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEec
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILF 55 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~ 55 (70)
..|.+.|.+++| ++++|++|+.||+|++||+++++....+..+
T Consensus 170 ~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h 212 (435)
T 1p22_A 170 TGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHH 212 (435)
T ss_dssp CCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCC
T ss_pred cCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCC
Confidence 378999999999 7899999999999999999988766555433
No 120
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.18 E-value=2.1e-06 Score=63.11 Aligned_cols=50 Identities=2% Similarity=-0.117 Sum_probs=38.5
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEecccccccccCC
Q psy11104 16 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILFQERNLQDKLP 65 (70)
Q Consensus 16 ~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~~~~~~~~~~~ 65 (70)
.|.+|+|+|+++.+|+|+.|++||+||++++.+...+..+.....+.+|-
T Consensus 357 ~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~S 406 (524)
T 2j04_B 357 NLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVS 406 (524)
T ss_dssp SCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECC
T ss_pred cccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeC
Confidence 58999999999999999999999999999887655555443333333443
No 121
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.03 E-value=4.9e-06 Score=63.60 Aligned_cols=35 Identities=17% Similarity=0.164 Sum_probs=31.3
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDT 45 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~ 45 (70)
..|...|.+++|||||++||+++.||.|++||.++
T Consensus 82 ~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~ 116 (588)
T 2j04_A 82 SQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK 116 (588)
T ss_dssp TSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE
T ss_pred cCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc
Confidence 36678899999999999999999999999999433
No 122
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=98.03 E-value=4.8e-06 Score=56.50 Aligned_cols=42 Identities=10% Similarity=0.070 Sum_probs=37.1
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEE
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMII 53 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~ 53 (70)
.|.+.|++++|+|++.++++++.||.|++||+++++....+.
T Consensus 167 ~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~ 208 (433)
T 3bws_A 167 KKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVD 208 (433)
T ss_dssp TTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEE
T ss_pred ccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEc
Confidence 577899999999999999999999999999999877665554
No 123
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.00 E-value=1.9e-05 Score=54.47 Aligned_cols=45 Identities=16% Similarity=0.288 Sum_probs=35.8
Q ss_pred eeecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 8 KIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 8 ~I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
....+|.+.|.+++| ++++|++|+.||+|++||+++++....+..
T Consensus 250 ~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 294 (435)
T 1p22_A 250 RVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNG 294 (435)
T ss_dssp EEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred eEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcC
Confidence 345578889999998 788999999999999999988876555543
No 124
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.94 E-value=1.9e-05 Score=54.36 Aligned_cols=40 Identities=23% Similarity=0.525 Sum_probs=35.0
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEE
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMII 53 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~ 53 (70)
.|.+.|.+++|+ +++|++|+.||.|++||+++++....+.
T Consensus 360 ~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~ 399 (445)
T 2ovr_B 360 KHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLV 399 (445)
T ss_dssp SCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred CCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeee
Confidence 388899999995 6899999999999999999998766663
No 125
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=97.91 E-value=2.5e-05 Score=54.61 Aligned_cols=38 Identities=13% Similarity=0.132 Sum_probs=33.7
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCC---cEEEEECCCCCeE
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDG---LLKVLKLDTVSLT 49 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg---~IklWdi~~~~~~ 49 (70)
.|...|.+++|||||++||+++.|+ .|++||+++++..
T Consensus 176 ~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~ 216 (415)
T 2hqs_A 176 RSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR 216 (415)
T ss_dssp EESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE
T ss_pred CCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE
Confidence 4678899999999999999999886 9999999987653
No 126
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.89 E-value=2.3e-05 Score=54.00 Aligned_cols=41 Identities=20% Similarity=0.149 Sum_probs=33.9
Q ss_pred cCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEE
Q psy11104 11 IPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMII 53 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~ 53 (70)
.+|.+.|.+++|+ +++|++|+.||+|++||+.+++....+.
T Consensus 156 ~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 196 (445)
T 2ovr_B 156 VGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLY 196 (445)
T ss_dssp CCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred cCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEEC
Confidence 3688999999997 6799999999999999998886554443
No 127
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.86 E-value=2.8e-05 Score=51.99 Aligned_cols=41 Identities=2% Similarity=-0.018 Sum_probs=33.5
Q ss_pred CCCCeEEEEEcCCCCEE-EEEeCCCcEEEEECCCCCeEEEEE
Q psy11104 13 NNTKVNCLAWHQNQGWI-AVGGDDGLLKVLKLDTVSLTIMII 53 (70)
Q Consensus 13 ~~~~V~~va~spdg~~L-asGg~Dg~IklWdi~~~~~~~~~~ 53 (70)
+...+.+++|+|+|++| ++++.|+.|++||+++++....+.
T Consensus 30 ~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~ 71 (391)
T 1l0q_A 30 VGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVP 71 (391)
T ss_dssp CSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEE
T ss_pred cCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEE
Confidence 44569999999999876 788899999999998887654443
No 128
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=97.77 E-value=4.4e-05 Score=47.97 Aligned_cols=37 Identities=19% Similarity=0.328 Sum_probs=32.1
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC-CCeE
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDT-VSLT 49 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~-~~~~ 49 (70)
.|...|.+++|+|+|++||+++ |+.|++||+.+ ++..
T Consensus 39 ~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~ 76 (297)
T 2ojh_A 39 QTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPE 76 (297)
T ss_dssp EESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCE
T ss_pred cCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCce
Confidence 4678899999999999999987 88999999988 6543
No 129
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.66 E-value=0.00015 Score=48.37 Aligned_cols=41 Identities=10% Similarity=0.053 Sum_probs=33.8
Q ss_pred CCCeEEEEEcCCCCEE-EEEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 14 NTKVNCLAWHQNQGWI-AVGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 14 ~~~V~~va~spdg~~L-asGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
...+.+++|+|+|++| ++++.|+.|++||+++++....+..
T Consensus 243 ~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~ 284 (391)
T 1l0q_A 243 GPDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAV 284 (391)
T ss_dssp CSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred CCCccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEEC
Confidence 4468999999999876 7889999999999998876655543
No 130
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.64 E-value=0.00018 Score=55.46 Aligned_cols=41 Identities=20% Similarity=0.177 Sum_probs=36.0
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEE
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMI 52 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~ 52 (70)
+|...+.+++|||||++||+++.|+.|++||+++++.....
T Consensus 376 ~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~ 416 (1045)
T 1k32_A 376 ENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIE 416 (1045)
T ss_dssp CCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEec
Confidence 66788999999999999999999999999999988755443
No 131
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=97.56 E-value=0.00022 Score=46.01 Aligned_cols=42 Identities=14% Similarity=0.068 Sum_probs=35.5
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEec
Q psy11104 14 NTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILF 55 (70)
Q Consensus 14 ~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~ 55 (70)
...+.+++|+|+|++|++++.|+.|++||+++++..-.+...
T Consensus 279 ~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~ 320 (337)
T 1pby_B 279 PHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLP 320 (337)
T ss_dssp SSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEECG
T ss_pred CCceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEcC
Confidence 356789999999999999999999999999998876655544
No 132
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=97.54 E-value=0.00016 Score=50.54 Aligned_cols=37 Identities=16% Similarity=0.153 Sum_probs=30.9
Q ss_pred CCCCCeEEEEEcCCCCEEE-EEeCCCc--EEEEECCCCCe
Q psy11104 12 PNNTKVNCLAWHQNQGWIA-VGGDDGL--LKVLKLDTVSL 48 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~La-sGg~Dg~--IklWdi~~~~~ 48 (70)
.|.+.+.+++|+|||+.|| +++.||. |++||+++++.
T Consensus 220 ~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~ 259 (415)
T 2hqs_A 220 SFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI 259 (415)
T ss_dssp CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE
T ss_pred cCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE
Confidence 4677899999999999888 7777765 99999988764
No 133
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.49 E-value=0.00021 Score=48.36 Aligned_cols=38 Identities=8% Similarity=-0.057 Sum_probs=32.2
Q ss_pred CCCCCeEEEEEcCCCCEE-EEEeCCCcEEEEECCCCCeE
Q psy11104 12 PNNTKVNCLAWHQNQGWI-AVGGDDGLLKVLKLDTVSLT 49 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~L-asGg~Dg~IklWdi~~~~~~ 49 (70)
.|...+.+++|+|+++++ ++++.||.|++||+++++..
T Consensus 209 ~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~ 247 (433)
T 3bws_A 209 LTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEI 247 (433)
T ss_dssp CSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEE
Confidence 578899999999999877 56668999999999877643
No 134
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=97.47 E-value=2.8e-05 Score=55.68 Aligned_cols=42 Identities=14% Similarity=-0.026 Sum_probs=32.9
Q ss_pred CCCCeEEEEEcCCCCEEEEEeC-CCcEEEEECCCCCeEEEEEec
Q psy11104 13 NNTKVNCLAWHQNQGWIAVGGD-DGLLKVLKLDTVSLTIMIILF 55 (70)
Q Consensus 13 ~~~~V~~va~spdg~~LasGg~-Dg~IklWdi~~~~~~~~~~~~ 55 (70)
+..+|++++|+|||+.||+++. ||+++||++.++ ....+..+
T Consensus 20 ~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g-~~~~lt~~ 62 (582)
T 3o4h_A 20 IAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGG-ETVKLNRE 62 (582)
T ss_dssp HHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETT-EEEECCSS
T ss_pred hccchheeecCCCCCeEEEEEccCCceeEEEEcCC-CcEeeecc
Confidence 4567999999999999999887 999999998544 33333333
No 135
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=97.43 E-value=0.00062 Score=49.80 Aligned_cols=36 Identities=17% Similarity=0.220 Sum_probs=31.0
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEEC--CCCCeEEEE
Q psy11104 17 VNCLAWHQNQGWIAVGGDDGLLKVLKL--DTVSLTIMI 52 (70)
Q Consensus 17 V~~va~spdg~~LasGg~Dg~IklWdi--~~~~~~~~~ 52 (70)
+.+++|+|||++|++++.|++|++||+ ++.+..-.+
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i 218 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEI 218 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEE
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEE
Confidence 899999999999999999999999999 666544333
No 136
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=97.40 E-value=0.00041 Score=50.51 Aligned_cols=37 Identities=5% Similarity=-0.057 Sum_probs=32.3
Q ss_pred CCCeEEEEEcCCCCEEEEEeC-CC-----cEEEEECCCCCeEE
Q psy11104 14 NTKVNCLAWHQNQGWIAVGGD-DG-----LLKVLKLDTVSLTI 50 (70)
Q Consensus 14 ~~~V~~va~spdg~~LasGg~-Dg-----~IklWdi~~~~~~~ 50 (70)
...+.+++|||||++||+++. || .|++||+.+++..-
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~ 78 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRL 78 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeE
Confidence 456899999999999999998 88 99999999886543
No 137
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=97.38 E-value=0.00041 Score=43.45 Aligned_cols=39 Identities=5% Similarity=-0.100 Sum_probs=32.0
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCC-----------CcEEEEECCCCCeEE
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDD-----------GLLKVLKLDTVSLTI 50 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~D-----------g~IklWdi~~~~~~~ 50 (70)
.|...+.+++|+|+|++|+.++.| +.|++||+++++...
T Consensus 214 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~ 263 (297)
T 2ojh_A 214 DSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVET 263 (297)
T ss_dssp CCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEE
T ss_pred cCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCcee
Confidence 456678999999999999988876 569999998876543
No 138
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=97.38 E-value=0.00019 Score=51.36 Aligned_cols=38 Identities=8% Similarity=-0.106 Sum_probs=34.0
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCC--cEEEEECCCCCeE
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDG--LLKVLKLDTVSLT 49 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg--~IklWdi~~~~~~ 49 (70)
.|.+.+.+++|||||++||+++.|| .|++||+++++..
T Consensus 192 ~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 192 SGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE 231 (582)
T ss_dssp CSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE
T ss_pred cCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE
Confidence 5667889999999999999999999 8999999988766
No 139
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=97.34 E-value=0.00033 Score=45.55 Aligned_cols=39 Identities=23% Similarity=0.334 Sum_probs=32.6
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEE
Q psy11104 14 NTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMI 52 (70)
Q Consensus 14 ~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~ 52 (70)
...+.+++|+|+|++|++++.|+.|++||.++.+..-.+
T Consensus 294 ~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~ 332 (349)
T 1jmx_B 294 DHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNI 332 (349)
T ss_dssp SSCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEE
T ss_pred CCCccceEECCCCCEEEEecCCCeEEEEeccccceeeee
Confidence 345789999999998888899999999999988755444
No 140
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.25 E-value=0.00069 Score=43.78 Aligned_cols=36 Identities=8% Similarity=0.058 Sum_probs=30.7
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCC-CcEEEEECC--CCC
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDD-GLLKVLKLD--TVS 47 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~D-g~IklWdi~--~~~ 47 (70)
++...+.+++|+|+|++|++++.+ +.|++|++. +++
T Consensus 35 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~ 73 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGA 73 (343)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCC
T ss_pred ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCc
Confidence 567789999999999988888876 999999997 444
No 141
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.13 E-value=0.00034 Score=53.92 Aligned_cols=38 Identities=13% Similarity=0.146 Sum_probs=32.3
Q ss_pred ecCCCCCeEEEEEcCCCCEEEEEeCCC----------cEEEEECCCCC
Q psy11104 10 AIPNNTKVNCLAWHQNQGWIAVGGDDG----------LLKVLKLDTVS 47 (70)
Q Consensus 10 ~~~~~~~V~~va~spdg~~LasGg~Dg----------~IklWdi~~~~ 47 (70)
...|.+.+.+++|||||++||+++.++ .|++||+++++
T Consensus 416 ~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~ 463 (1045)
T 1k32_A 416 ERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK 463 (1045)
T ss_dssp EECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE
T ss_pred ccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc
Confidence 336788899999999999999987754 99999998765
No 142
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=97.03 E-value=0.00041 Score=50.57 Aligned_cols=33 Identities=6% Similarity=0.177 Sum_probs=29.3
Q ss_pred CeEEEEEcCCCCEEEEEeC---------CCcEEEEECCCCCe
Q psy11104 16 KVNCLAWHQNQGWIAVGGD---------DGLLKVLKLDTVSL 48 (70)
Q Consensus 16 ~V~~va~spdg~~LasGg~---------Dg~IklWdi~~~~~ 48 (70)
.+.+++|||||++||+++. |+.|++||+++++.
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~ 102 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEF 102 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEE
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCcc
Confidence 3889999999999999887 79999999988764
No 143
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=96.99 E-value=0.0017 Score=43.22 Aligned_cols=39 Identities=10% Similarity=-0.046 Sum_probs=32.0
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEE
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTI 50 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~ 50 (70)
.+...+.+++|+|||+.|+.++.|+.|++||+.+++...
T Consensus 78 ~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~ 116 (388)
T 3pe7_A 78 GRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENV 116 (388)
T ss_dssp SSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEE
T ss_pred CCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCccee
Confidence 344445567899999999999999999999999887554
No 144
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=96.98 E-value=0.0013 Score=45.29 Aligned_cols=34 Identities=12% Similarity=0.123 Sum_probs=29.7
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEECCCC--CeEEE
Q psy11104 17 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTV--SLTIM 51 (70)
Q Consensus 17 V~~va~spdg~~LasGg~Dg~IklWdi~~~--~~~~~ 51 (70)
+.+|+|+|||++|++++. ++|.+||.+++ +..-+
T Consensus 307 p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~ 342 (361)
T 2oiz_A 307 ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRT 342 (361)
T ss_dssp CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEE
T ss_pred eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEE
Confidence 899999999999998887 99999999998 55443
No 145
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=96.93 E-value=0.0025 Score=46.20 Aligned_cols=39 Identities=13% Similarity=0.268 Sum_probs=32.5
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCC-----cEEEEECCCCCeEE
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDG-----LLKVLKLDTVSLTI 50 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg-----~IklWdi~~~~~~~ 50 (70)
+|...+.+++|+|||++|++++.|+ .|++||+.+++...
T Consensus 255 ~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~ 298 (706)
T 2z3z_A 255 PKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVR 298 (706)
T ss_dssp CTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEE
T ss_pred CCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceee
Confidence 4566789999999999999988776 99999999884333
No 146
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=96.93 E-value=0.00051 Score=50.73 Aligned_cols=36 Identities=17% Similarity=0.233 Sum_probs=30.5
Q ss_pred CCCCeEEEEEcCCCCEEE-----EEeCCCcEEEEECCCCCe
Q psy11104 13 NNTKVNCLAWHQNQGWIA-----VGGDDGLLKVLKLDTVSL 48 (70)
Q Consensus 13 ~~~~V~~va~spdg~~La-----sGg~Dg~IklWdi~~~~~ 48 (70)
|...+.+++|||||++|| +|+++..|++||+.+++.
T Consensus 119 ~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~ 159 (695)
T 2bkl_A 119 GTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEW 159 (695)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCB
T ss_pred CCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCC
Confidence 444688999999999999 667778999999998864
No 147
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=96.90 E-value=0.002 Score=46.69 Aligned_cols=33 Identities=6% Similarity=0.012 Sum_probs=29.0
Q ss_pred CeEEEEEcCCCCEEEEEeCC---------CcEEEEECCCCCe
Q psy11104 16 KVNCLAWHQNQGWIAVGGDD---------GLLKVLKLDTVSL 48 (70)
Q Consensus 16 ~V~~va~spdg~~LasGg~D---------g~IklWdi~~~~~ 48 (70)
.|.+++|||||++||+++.| +.|++||+++++.
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~ 103 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP 103 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce
Confidence 48999999999999999875 7788999988765
No 148
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=96.90 E-value=0.002 Score=42.53 Aligned_cols=33 Identities=15% Similarity=0.219 Sum_probs=28.5
Q ss_pred CCCCeEEEEEcCCCCEEEEEe-CCCcEEEEECCC
Q psy11104 13 NNTKVNCLAWHQNQGWIAVGG-DDGLLKVLKLDT 45 (70)
Q Consensus 13 ~~~~V~~va~spdg~~LasGg-~Dg~IklWdi~~ 45 (70)
+...+.+++|+|||++|++++ .|+.|++|++..
T Consensus 84 ~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~ 117 (347)
T 3hfq_A 84 PGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAA 117 (347)
T ss_dssp ESCCCSEEEEETTTTEEEEEETTTTEEEEEEECT
T ss_pred CCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCC
Confidence 566789999999999888877 789999999964
No 149
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=96.87 E-value=0.002 Score=42.55 Aligned_cols=36 Identities=6% Similarity=0.029 Sum_probs=27.7
Q ss_pred CCCCeEEEEEcCCCCEEEEEeC-CCcEEEEEC--CCCCe
Q psy11104 13 NNTKVNCLAWHQNQGWIAVGGD-DGLLKVLKL--DTVSL 48 (70)
Q Consensus 13 ~~~~V~~va~spdg~~LasGg~-Dg~IklWdi--~~~~~ 48 (70)
+...+.+++|+|||++|++++. ++.|++|++ ++++.
T Consensus 284 ~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l 322 (347)
T 3hfq_A 284 EGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKL 322 (347)
T ss_dssp SSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCE
T ss_pred CCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeE
Confidence 3556889999999998887765 489999954 45543
No 150
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=96.87 E-value=0.0022 Score=46.67 Aligned_cols=36 Identities=11% Similarity=0.028 Sum_probs=30.6
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCe
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSL 48 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~ 48 (70)
.|...+.+++|||||++||.++ ++.|++||+.+++.
T Consensus 149 ~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~ 184 (741)
T 2ecf_A 149 HGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQ 184 (741)
T ss_dssp CSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEE
T ss_pred cCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCE
Confidence 4567899999999999999988 46899999987653
No 151
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=96.86 E-value=0.0029 Score=40.68 Aligned_cols=38 Identities=8% Similarity=-0.058 Sum_probs=30.9
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEE
Q psy11104 13 NNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMI 52 (70)
Q Consensus 13 ~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~ 52 (70)
+...+.+++|+|||++++++ |+.|++||+++++..-.+
T Consensus 239 ~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~ 276 (337)
T 1pby_B 239 MDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRV 276 (337)
T ss_dssp CSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEE
T ss_pred CCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCccee
Confidence 44567889999999999988 799999999887654443
No 152
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=96.85 E-value=0.006 Score=40.56 Aligned_cols=38 Identities=5% Similarity=0.071 Sum_probs=30.8
Q ss_pred ecCCCCCeEEEEEcCCCCEEEEEe-CCCcEEEEECCCCC
Q psy11104 10 AIPNNTKVNCLAWHQNQGWIAVGG-DDGLLKVLKLDTVS 47 (70)
Q Consensus 10 ~~~~~~~V~~va~spdg~~LasGg-~Dg~IklWdi~~~~ 47 (70)
..++...+.+++|+|||++++.++ .++.|++|+++++.
T Consensus 206 ~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~ 244 (361)
T 3scy_A 206 KVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGM 244 (361)
T ss_dssp ECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTE
T ss_pred ecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCc
Confidence 345566789999999999877666 68999999998664
No 153
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=96.75 E-value=0.005 Score=40.04 Aligned_cols=37 Identities=5% Similarity=0.081 Sum_probs=30.1
Q ss_pred CCCCCeEEEEEcCCCCE-EEEEeCCCcEEEEECCCCCe
Q psy11104 12 PNNTKVNCLAWHQNQGW-IAVGGDDGLLKVLKLDTVSL 48 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~-LasGg~Dg~IklWdi~~~~~ 48 (70)
+......+++|+|+|++ ++++..++.|++||+++++.
T Consensus 173 ~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 173 SGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPEN 210 (331)
T ss_dssp CSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTS
T ss_pred cCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcc
Confidence 34566899999999985 56666799999999988776
No 154
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=96.68 E-value=0.0086 Score=38.74 Aligned_cols=38 Identities=13% Similarity=0.014 Sum_probs=30.5
Q ss_pred CeEEEEEcCCCCE-EEEEeCCCcEEEEECCCCCeEEEEE
Q psy11104 16 KVNCLAWHQNQGW-IAVGGDDGLLKVLKLDTVSLTIMII 53 (70)
Q Consensus 16 ~V~~va~spdg~~-LasGg~Dg~IklWdi~~~~~~~~~~ 53 (70)
.+.+++|+|+|++ +++++.++.|++||+++++....+.
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~ 82 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHAN 82 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEE
Confidence 6789999999985 4666789999999999887654443
No 155
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=96.65 E-value=0.0031 Score=46.85 Aligned_cols=35 Identities=11% Similarity=0.283 Sum_probs=29.9
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEE
Q psy11104 14 NTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTI 50 (70)
Q Consensus 14 ~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~ 50 (70)
.....+++|+|||++++++ ||+|++||+.+++...
T Consensus 16 ~~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~ 50 (740)
T 4a5s_A 16 RLKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSV 50 (740)
T ss_dssp CCCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEE
T ss_pred cccccccEECCCCcEEEEc--CCcEEEEECCCCceEE
Confidence 3456789999999999996 9999999999988643
No 156
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=96.65 E-value=0.0086 Score=38.89 Aligned_cols=34 Identities=12% Similarity=-0.132 Sum_probs=27.3
Q ss_pred CCCeEEEEEcCCCCEEEEE-eCCCcEEEEECCCCCe
Q psy11104 14 NTKVNCLAWHQNQGWIAVG-GDDGLLKVLKLDTVSL 48 (70)
Q Consensus 14 ~~~V~~va~spdg~~LasG-g~Dg~IklWdi~~~~~ 48 (70)
...+ +++|+|+|++++.+ ..++.|++||.++++.
T Consensus 40 ~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~ 74 (331)
T 3u4y_A 40 YDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPP 74 (331)
T ss_dssp CCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSC
T ss_pred CCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCce
Confidence 4455 99999999865554 4589999999998876
No 157
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=96.60 E-value=0.0085 Score=38.56 Aligned_cols=35 Identities=14% Similarity=0.228 Sum_probs=27.9
Q ss_pred cCCCCCeEEEEEcCCCCEEE-EEeCCCcEEEEECCC
Q psy11104 11 IPNNTKVNCLAWHQNQGWIA-VGGDDGLLKVLKLDT 45 (70)
Q Consensus 11 ~~~~~~V~~va~spdg~~La-sGg~Dg~IklWdi~~ 45 (70)
.+....+.+++|+|+|++|+ +++.++.|++|++..
T Consensus 174 ~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~ 209 (343)
T 1ri6_A 174 TVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKD 209 (343)
T ss_dssp CSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSC
T ss_pred cCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 34456789999999999664 555899999999954
No 158
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=96.58 E-value=0.0017 Score=47.03 Aligned_cols=20 Identities=10% Similarity=0.104 Sum_probs=17.2
Q ss_pred eEEEEEcCCCCEEEEEeCCC
Q psy11104 17 VNCLAWHQNQGWIAVGGDDG 36 (70)
Q Consensus 17 V~~va~spdg~~LasGg~Dg 36 (70)
+.+++|||||++||+++.|+
T Consensus 175 ~~~~~~SpDg~~la~~~~~~ 194 (723)
T 1xfd_A 175 HIAHWWSPDGTRLAYAAIND 194 (723)
T ss_dssp SEEEEECTTSSEEEEEEEEC
T ss_pred cceEEECCCCCEEEEEEECC
Confidence 37899999999999988654
No 159
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=96.55 E-value=0.0019 Score=46.83 Aligned_cols=32 Identities=13% Similarity=0.095 Sum_probs=27.4
Q ss_pred eEEEEEcCCCCEEEEEe---------------------------------CCCcEEEEECCCCCe
Q psy11104 17 VNCLAWHQNQGWIAVGG---------------------------------DDGLLKVLKLDTVSL 48 (70)
Q Consensus 17 V~~va~spdg~~LasGg---------------------------------~Dg~IklWdi~~~~~ 48 (70)
+.+++|||||++||+++ .++.|++||+++++.
T Consensus 183 ~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~ 247 (706)
T 2z3z_A 183 EKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKT 247 (706)
T ss_dssp CCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEE
T ss_pred CceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCce
Confidence 58999999999999998 457899999987753
No 160
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=96.55 E-value=0.004 Score=40.50 Aligned_cols=41 Identities=12% Similarity=0.035 Sum_probs=34.2
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEE
Q psy11104 13 NNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMII 53 (70)
Q Consensus 13 ~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~ 53 (70)
+...+.+++|+|+|++|+.++.|+.|.+||.++++..-.+.
T Consensus 183 ~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~ 223 (353)
T 3vgz_A 183 TGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKK 223 (353)
T ss_dssp CCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEE
T ss_pred CCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEE
Confidence 45568899999999999999999999999998887654443
No 161
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=96.54 E-value=0.0019 Score=47.04 Aligned_cols=33 Identities=9% Similarity=0.030 Sum_probs=28.7
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCe
Q psy11104 15 TKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSL 48 (70)
Q Consensus 15 ~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~ 48 (70)
..+.+++|||||+.||.++ |+.|++||+.++..
T Consensus 110 ~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~ 142 (719)
T 1z68_A 110 RPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPP 142 (719)
T ss_dssp SSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCC
T ss_pred cccccceECCCCCEEEEEE-CCeEEEEeCCCCCc
Confidence 4688999999999999986 78999999987654
No 162
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=96.40 E-value=0.017 Score=37.51 Aligned_cols=41 Identities=2% Similarity=-0.028 Sum_probs=31.1
Q ss_pred CCCCeEEEEEcCCCCEEEEEe-CCCcEEEEECCCCCeEEEEE
Q psy11104 13 NNTKVNCLAWHQNQGWIAVGG-DDGLLKVLKLDTVSLTIMII 53 (70)
Q Consensus 13 ~~~~V~~va~spdg~~LasGg-~Dg~IklWdi~~~~~~~~~~ 53 (70)
+...+.+++|+|+|++++.++ .++.|.+||.++++..-.+.
T Consensus 229 ~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~ 270 (353)
T 3vgz_A 229 KEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVA 270 (353)
T ss_dssp SCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEE
T ss_pred CCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEE
Confidence 455688999999998665554 55999999998887654443
No 163
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=96.32 E-value=0.0098 Score=40.15 Aligned_cols=36 Identities=8% Similarity=0.131 Sum_probs=29.3
Q ss_pred CCCCeEEEEEcCCCCEEEEEe-CCCcEEEEECC-CCCe
Q psy11104 13 NNTKVNCLAWHQNQGWIAVGG-DDGLLKVLKLD-TVSL 48 (70)
Q Consensus 13 ~~~~V~~va~spdg~~LasGg-~Dg~IklWdi~-~~~~ 48 (70)
+...+.+++|+|||++|++++ .++.|++||++ +++.
T Consensus 143 ~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~ 180 (365)
T 1jof_A 143 ENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEV 180 (365)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCE
T ss_pred CCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCE
Confidence 456799999999999887765 46899999998 5653
No 164
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=96.29 E-value=0.0086 Score=43.72 Aligned_cols=41 Identities=5% Similarity=0.108 Sum_probs=33.7
Q ss_pred CCCCeEEEEEcC----CCCEEEEEeC-CCcEEEEECCCCCeEEEEE
Q psy11104 13 NNTKVNCLAWHQ----NQGWIAVGGD-DGLLKVLKLDTVSLTIMII 53 (70)
Q Consensus 13 ~~~~V~~va~sp----dg~~LasGg~-Dg~IklWdi~~~~~~~~~~ 53 (70)
+...+..++||| ||++|++++. |++|++||..+.+..-.+.
T Consensus 220 ~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~ 265 (543)
T 1nir_A 220 IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVS 265 (543)
T ss_dssp CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEE
T ss_pred cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeec
Confidence 466789999999 9999999884 8999999998877554443
No 165
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=96.27 E-value=0.0042 Score=45.85 Aligned_cols=35 Identities=17% Similarity=0.279 Sum_probs=28.9
Q ss_pred CCeEEEEEcCCCCEEEEEeCCC-----cEEEEECCCCCeE
Q psy11104 15 TKVNCLAWHQNQGWIAVGGDDG-----LLKVLKLDTVSLT 49 (70)
Q Consensus 15 ~~V~~va~spdg~~LasGg~Dg-----~IklWdi~~~~~~ 49 (70)
..+.+++|||||++||.+++++ .|++||+.+++..
T Consensus 125 ~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~ 164 (710)
T 2xdw_A 125 VALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKEL 164 (710)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEE
T ss_pred EEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCC
Confidence 3578999999999999876544 8999999988754
No 166
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=96.22 E-value=0.016 Score=38.43 Aligned_cols=31 Identities=6% Similarity=0.139 Sum_probs=25.1
Q ss_pred CCCeEEEEEcCCCCEEEEEeC--CCcEEEEECC
Q psy11104 14 NTKVNCLAWHQNQGWIAVGGD--DGLLKVLKLD 44 (70)
Q Consensus 14 ~~~V~~va~spdg~~LasGg~--Dg~IklWdi~ 44 (70)
.....+++|+|||++|+.++. ++.|++|++.
T Consensus 258 ~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 258 AQGSGDIHLSPDGKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp CCCEEEEEECTTSSEEEEEECSSSCEEEEEEEC
T ss_pred CCCcccEEECCCCCEEEEECCCCCCEEEEEEEc
Confidence 345689999999998866555 5899999986
No 167
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.16 E-value=0.011 Score=39.06 Aligned_cols=31 Identities=10% Similarity=-0.095 Sum_probs=27.4
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEECCCCCeE
Q psy11104 19 CLAWHQNQGWIAVGGDDGLLKVLKLDTVSLT 49 (70)
Q Consensus 19 ~va~spdg~~LasGg~Dg~IklWdi~~~~~~ 49 (70)
++.|+|||+.||.++.++.|++||+.+++..
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~ 115 (396)
T 3c5m_A 85 GGFISTDERAFFYVKNELNLMKVDLETLEEQ 115 (396)
T ss_dssp TCEECTTSSEEEEEETTTEEEEEETTTCCEE
T ss_pred cceECCCCCEEEEEEcCCcEEEEECCCCCcE
Confidence 4789999999999999999999999887644
No 168
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=96.14 E-value=0.0069 Score=43.62 Aligned_cols=34 Identities=15% Similarity=0.098 Sum_probs=29.0
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCe
Q psy11104 13 NNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSL 48 (70)
Q Consensus 13 ~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~ 48 (70)
+...|.|++|||+| ++.|..||+|++|+..+...
T Consensus 161 ~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~ 194 (388)
T 1xip_A 161 LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEM 194 (388)
T ss_dssp EEESEEEEEECSSE--EEEEETTSCEEEEEEETTEE
T ss_pred ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccc
Confidence 45689999999999 78899999999998877653
No 169
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=96.08 E-value=0.0072 Score=44.88 Aligned_cols=35 Identities=9% Similarity=-0.007 Sum_probs=30.2
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~ 47 (70)
.+.+.+...+|||||+.||.++ |+.|++|++.++.
T Consensus 109 ~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~ 143 (740)
T 4a5s_A 109 RIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLP 143 (740)
T ss_dssp CCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSC
T ss_pred cCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCc
Confidence 3567899999999999999985 6899999998765
No 170
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=96.07 E-value=0.0023 Score=46.01 Aligned_cols=33 Identities=12% Similarity=0.115 Sum_probs=29.1
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCC----------CcEEEEECCC
Q psy11104 13 NNTKVNCLAWHQNQGWIAVGGDD----------GLLKVLKLDT 45 (70)
Q Consensus 13 ~~~~V~~va~spdg~~LasGg~D----------g~IklWdi~~ 45 (70)
|...+.+++|||||+.||++++| ..|++||+.+
T Consensus 128 ~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 170 (662)
T 3azo_A 128 GGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDG 170 (662)
T ss_dssp TCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTS
T ss_pred CCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCC
Confidence 45678899999999999999887 5899999987
No 171
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=95.98 E-value=0.005 Score=45.73 Aligned_cols=37 Identities=14% Similarity=0.281 Sum_probs=29.8
Q ss_pred CCCCCeEEEEEcCCCCEEE-----EEeCCCcEEEEECCCCCe
Q psy11104 12 PNNTKVNCLAWHQNQGWIA-----VGGDDGLLKVLKLDTVSL 48 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~La-----sGg~Dg~IklWdi~~~~~ 48 (70)
.+...+.+++|||||++|| +|+++..|++||+++++.
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~ 167 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQP 167 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSE
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCC
Confidence 3445688999999999998 455557899999999874
No 172
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=95.97 E-value=0.02 Score=37.51 Aligned_cols=38 Identities=8% Similarity=0.130 Sum_probs=32.2
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeE
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLT 49 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~ 49 (70)
.+...+.+++|+|+|++++++..++.|.+||.++++..
T Consensus 42 ~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~ 79 (333)
T 2dg1_A 42 KKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIK 79 (333)
T ss_dssp SSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEE
T ss_pred ccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEE
Confidence 34567899999999999999999999999998877643
No 173
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=95.91 E-value=0.02 Score=41.09 Aligned_cols=36 Identities=14% Similarity=0.211 Sum_probs=27.6
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCc--EEEEECCCCC
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGL--LKVLKLDTVS 47 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~--IklWdi~~~~ 47 (70)
.+...+.+++|+|||+++++++.||. |.+||.++++
T Consensus 239 ~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~ 276 (662)
T 3azo_A 239 GPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGA 276 (662)
T ss_dssp ETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCC
T ss_pred CCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCc
Confidence 45678999999999999999999995 5555554544
No 174
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=95.86 E-value=0.0066 Score=45.17 Aligned_cols=34 Identities=12% Similarity=0.075 Sum_probs=28.4
Q ss_pred CeEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCCeE
Q psy11104 16 KVNCLAWHQNQGWIAVGGDD-----GLLKVLKLDTVSLT 49 (70)
Q Consensus 16 ~V~~va~spdg~~LasGg~D-----g~IklWdi~~~~~~ 49 (70)
.+.+++|||||++||.++++ ..|++||+++++..
T Consensus 164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~ 202 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPL 202 (741)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEE
T ss_pred EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCC
Confidence 57899999999999987654 36999999998753
No 175
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=95.86 E-value=0.018 Score=38.77 Aligned_cols=32 Identities=9% Similarity=0.089 Sum_probs=27.0
Q ss_pred CCCCeEEEEEcCCCCEEEEEeC-CCcEEEEECC
Q psy11104 13 NNTKVNCLAWHQNQGWIAVGGD-DGLLKVLKLD 44 (70)
Q Consensus 13 ~~~~V~~va~spdg~~LasGg~-Dg~IklWdi~ 44 (70)
|...+..++|+|||++|+.+++ ++.|++|+++
T Consensus 191 ~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~ 223 (365)
T 1jof_A 191 PGDHPRWVAMHPTGNYLYALMEAGNRICEYVID 223 (365)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred CCCCCCEeEECCCCCEEEEEECCCCeEEEEEEe
Confidence 4667999999999999887775 7899999875
No 176
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=95.73 E-value=0.0094 Score=39.56 Aligned_cols=29 Identities=24% Similarity=0.393 Sum_probs=23.8
Q ss_pred EEEcCCCCEEEEEeC-CCc--EEEEECCCCCe
Q psy11104 20 LAWHQNQGWIAVGGD-DGL--LKVLKLDTVSL 48 (70)
Q Consensus 20 va~spdg~~LasGg~-Dg~--IklWdi~~~~~ 48 (70)
.+|||||++||.++. ||. |.+||+++++.
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~ 72 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVA 72 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEE
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCce
Confidence 789999999999988 774 77788877653
No 177
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.57 E-value=0.013 Score=38.65 Aligned_cols=34 Identities=9% Similarity=-0.009 Sum_probs=26.9
Q ss_pred CeEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCCeE
Q psy11104 16 KVNCLAWHQNQGWIAVGGDD-----GLLKVLKLDTVSLT 49 (70)
Q Consensus 16 ~V~~va~spdg~~LasGg~D-----g~IklWdi~~~~~~ 49 (70)
.+..++|+|||++|+.++.+ +.|++||+++++..
T Consensus 239 ~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~ 277 (396)
T 3c5m_A 239 SCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENE 277 (396)
T ss_dssp EEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEE
T ss_pred cccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeE
Confidence 47889999999988877654 45999999887643
No 178
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=95.57 E-value=0.026 Score=36.22 Aligned_cols=29 Identities=10% Similarity=0.043 Sum_probs=25.0
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy11104 16 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDT 45 (70)
Q Consensus 16 ~V~~va~spdg~~LasGg~Dg~IklWdi~~ 45 (70)
.+.+++++|+|+++++ +.|+.|++|++..
T Consensus 252 ~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 252 QCFDVALMDDGSVVLA-SKDYRLYIYRYVQ 280 (286)
T ss_dssp CEEEEEEETTTEEEEE-ETTTEEEEEECSC
T ss_pred cceeEEECCCCcEEEE-CCCCeEEEEEccc
Confidence 4789999999998888 5799999999754
No 179
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=95.44 E-value=0.052 Score=36.18 Aligned_cols=36 Identities=11% Similarity=0.190 Sum_probs=30.7
Q ss_pred CCCeEEEEEcCCCCEEEEEeCC------------------------CcEEEEECCCCCeE
Q psy11104 14 NTKVNCLAWHQNQGWIAVGGDD------------------------GLLKVLKLDTVSLT 49 (70)
Q Consensus 14 ~~~V~~va~spdg~~LasGg~D------------------------g~IklWdi~~~~~~ 49 (70)
-+.+.+|+++|+|+++++.+.+ +.|.+||..+++..
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~ 82 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEIL 82 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEE
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEE
Confidence 3579999999999999998888 57999998877653
No 180
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=95.44 E-value=0.051 Score=40.39 Aligned_cols=40 Identities=18% Similarity=0.164 Sum_probs=32.5
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECC--CCCeEEEEE
Q psy11104 14 NTKVNCLAWHQNQGWIAVGGDDGLLKVLKLD--TVSLTIMII 53 (70)
Q Consensus 14 ~~~V~~va~spdg~~LasGg~Dg~IklWdi~--~~~~~~~~~ 53 (70)
...+.++.|+|||+++.+++.|+.|.+||+. +.+....+.
T Consensus 196 g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~ 237 (567)
T 1qks_A 196 GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIK 237 (567)
T ss_dssp SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEE
T ss_pred CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEe
Confidence 4467899999999999999999999999995 665544443
No 181
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=95.37 E-value=0.042 Score=35.92 Aligned_cols=32 Identities=9% Similarity=0.327 Sum_probs=26.7
Q ss_pred eEEEEEcCCCCEEEEEeCC---------------------------CcEEEEECCCCCe
Q psy11104 17 VNCLAWHQNQGWIAVGGDD---------------------------GLLKVLKLDTVSL 48 (70)
Q Consensus 17 V~~va~spdg~~LasGg~D---------------------------g~IklWdi~~~~~ 48 (70)
+.+++|+|||+.|+.++.+ ..|.+||+.+++.
T Consensus 106 ~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~ 164 (347)
T 2gop_A 106 IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEV 164 (347)
T ss_dssp EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEE
T ss_pred ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeE
Confidence 8899999999999888743 5789999988765
No 182
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=95.37 E-value=0.042 Score=35.58 Aligned_cols=37 Identities=11% Similarity=-0.061 Sum_probs=31.5
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeE
Q psy11104 13 NNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLT 49 (70)
Q Consensus 13 ~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~ 49 (70)
+...+.+++++|+|+++++.+.++.|.+||.++++..
T Consensus 67 ~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~ 103 (296)
T 3e5z_A 67 PSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWE 103 (296)
T ss_dssp SCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEE
T ss_pred CCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEE
Confidence 4567899999999999998888899999999777643
No 183
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=95.02 E-value=0.056 Score=34.98 Aligned_cols=32 Identities=19% Similarity=0.198 Sum_probs=28.0
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy11104 13 NNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLD 44 (70)
Q Consensus 13 ~~~~V~~va~spdg~~LasGg~Dg~IklWdi~ 44 (70)
+....++++|+|+|+.|++.+.++.|++|++.
T Consensus 170 ~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~ 201 (296)
T 3e5z_A 170 DRVKPNGLAFLPSGNLLVSDTGDNATHRYCLN 201 (296)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTTEEEEEEEC
T ss_pred CCCCCccEEECCCCCEEEEeCCCCeEEEEEEC
Confidence 44567899999999988888889999999987
No 184
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=94.88 E-value=0.097 Score=36.45 Aligned_cols=38 Identities=11% Similarity=0.093 Sum_probs=31.9
Q ss_pred CCCeEEEEEcCCCC-EEEEEe-CCCcEEEEECCCCCeEEE
Q psy11104 14 NTKVNCLAWHQNQG-WIAVGG-DDGLLKVLKLDTVSLTIM 51 (70)
Q Consensus 14 ~~~V~~va~spdg~-~LasGg-~Dg~IklWdi~~~~~~~~ 51 (70)
.....+++|+|||+ ++.++. .++.|.++|.++.+...+
T Consensus 317 g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 317 GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred CCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEee
Confidence 34578999999998 777776 599999999999887765
No 185
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=94.84 E-value=0.092 Score=34.23 Aligned_cols=38 Identities=11% Similarity=0.075 Sum_probs=31.2
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCC----CcEEEEECCCCCeE
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDD----GLLKVLKLDTVSLT 49 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~D----g~IklWdi~~~~~~ 49 (70)
.+...+.+++|+|+|++++++..+ +.|.+||.+++...
T Consensus 84 ~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~ 125 (333)
T 2dg1_A 84 SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQ 125 (333)
T ss_dssp CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCE
T ss_pred CCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEE
Confidence 345679999999999999888777 78999998876643
No 186
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=94.72 E-value=0.033 Score=37.15 Aligned_cols=34 Identities=3% Similarity=-0.110 Sum_probs=29.7
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDT 45 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~ 45 (70)
.+...+.+|+++|+|.++++...++.|++|++..
T Consensus 289 ~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 289 KHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp SCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred CccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 4556789999999999999999999999999754
No 187
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=94.62 E-value=0.12 Score=33.07 Aligned_cols=34 Identities=6% Similarity=-0.088 Sum_probs=28.9
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDT 45 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~ 45 (70)
.+...+++++++|+|+++++.+.++.|++||...
T Consensus 118 ~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g 151 (286)
T 1q7f_A 118 TILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNG 151 (286)
T ss_dssp TTCSCEEEEEECTTSCEEEEETTTTEEEEECTTS
T ss_pred ccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCC
Confidence 4456789999999999999988899999999643
No 188
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=94.37 E-value=0.058 Score=36.91 Aligned_cols=37 Identities=3% Similarity=-0.014 Sum_probs=29.4
Q ss_pred CCeEEEEEcCCCCEEEEEeC--CCcEEEEECCCCCeEEE
Q psy11104 15 TKVNCLAWHQNQGWIAVGGD--DGLLKVLKLDTVSLTIM 51 (70)
Q Consensus 15 ~~V~~va~spdg~~LasGg~--Dg~IklWdi~~~~~~~~ 51 (70)
.....++++|||++|.+++. +++|.+||+++++..-.
T Consensus 108 ~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~ 146 (361)
T 2oiz_A 108 NYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVED 146 (361)
T ss_dssp CCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEE
T ss_pred CCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEE
Confidence 45678999999999888763 68999999998865433
No 189
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=94.37 E-value=0.089 Score=37.78 Aligned_cols=40 Identities=18% Similarity=0.161 Sum_probs=31.4
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEec
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIILF 55 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~~ 55 (70)
++.+ |..|+| |+.+|+.| .||.|++||+++-.+.-....+
T Consensus 86 ~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~ 125 (388)
T 1xip_A 86 EIPD-VIFVCF--HGDQVLVS-TRNALYSLDLEELSEFRTVTSF 125 (388)
T ss_dssp ECTT-EEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEEEEEEC
T ss_pred eCCC-eeEEEE--CCCEEEEE-cCCcEEEEEchhhhccCcccee
Confidence 4556 999999 99999998 8899999998877655444333
No 190
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=94.07 E-value=0.056 Score=39.80 Aligned_cols=31 Identities=19% Similarity=0.259 Sum_probs=27.4
Q ss_pred eEEEEEcCCCCEEEEEeCCCc----------------EEEEECCCCC
Q psy11104 17 VNCLAWHQNQGWIAVGGDDGL----------------LKVLKLDTVS 47 (70)
Q Consensus 17 V~~va~spdg~~LasGg~Dg~----------------IklWdi~~~~ 47 (70)
+.+++|+|||+.|+.++.|+. |++|++.++.
T Consensus 173 ~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~ 219 (710)
T 2xdw_A 173 FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQ 219 (710)
T ss_dssp SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCG
T ss_pred cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCc
Confidence 567999999999999988876 9999998765
No 191
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=94.05 E-value=0.065 Score=34.96 Aligned_cols=33 Identities=6% Similarity=-0.107 Sum_probs=27.0
Q ss_pred CCCCCeEE-EEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy11104 12 PNNTKVNC-LAWHQNQGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 12 ~~~~~V~~-va~spdg~~LasGg~Dg~IklWdi~~~~ 47 (70)
.+...+.. ++|+ || ++++++.||.++|| +.+++
T Consensus 260 ~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~ 293 (347)
T 2gop_A 260 EVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGE 293 (347)
T ss_dssp TCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSS
T ss_pred cCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCc
Confidence 44567776 9999 98 99999999999999 87443
No 192
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=93.53 E-value=0.07 Score=39.29 Aligned_cols=30 Identities=10% Similarity=-0.016 Sum_probs=27.2
Q ss_pred EEEEEcCCCCEEEEEeCCCc-------------EEEEECCCCC
Q psy11104 18 NCLAWHQNQGWIAVGGDDGL-------------LKVLKLDTVS 47 (70)
Q Consensus 18 ~~va~spdg~~LasGg~Dg~-------------IklWdi~~~~ 47 (70)
.+++|+|||+.|+.++.|+. |++|++.++.
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~ 213 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEP 213 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCG
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCc
Confidence 68999999999999999887 9999998776
No 193
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=93.24 E-value=0.12 Score=32.41 Aligned_cols=32 Identities=6% Similarity=-0.085 Sum_probs=28.5
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Q psy11104 15 TKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTV 46 (70)
Q Consensus 15 ~~V~~va~spdg~~LasGg~Dg~IklWdi~~~ 46 (70)
..+.+++++|+|+++++.+.++.|++++....
T Consensus 234 ~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~ 265 (270)
T 1rwi_B 234 NTPLAVAVDSDRTVYVADRGNDRVVKLTSLEH 265 (270)
T ss_dssp SCEEEEEECTTCCEEEEEGGGTEEEEECCCGG
T ss_pred CCceeEEECCCCCEEEEECCCCEEEEEcCCCc
Confidence 56899999999999999999999999997654
No 194
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=92.81 E-value=0.32 Score=38.32 Aligned_cols=40 Identities=23% Similarity=0.145 Sum_probs=34.3
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 15 TKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 15 ~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
..+.+++..++..++.+-+.|+++|+|++.++.+..+...
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL 275 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL 275 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEEC
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeecc
Confidence 3578888888999999999999999999999987776544
No 195
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=92.40 E-value=0.18 Score=32.28 Aligned_cols=34 Identities=18% Similarity=0.215 Sum_probs=28.5
Q ss_pred CCeEEEEEcCCCCEEEE-------EeCCCcEEEEECCCCCe
Q psy11104 15 TKVNCLAWHQNQGWIAV-------GGDDGLLKVLKLDTVSL 48 (70)
Q Consensus 15 ~~V~~va~spdg~~Las-------Gg~Dg~IklWdi~~~~~ 48 (70)
....+++|+++|.++++ ++.++.|..||..+++.
T Consensus 18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~ 58 (314)
T 1pjx_A 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKK 58 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCE
T ss_pred CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcE
Confidence 45689999999999888 67889999999877664
No 196
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=91.93 E-value=0.29 Score=36.37 Aligned_cols=31 Identities=10% Similarity=0.332 Sum_probs=26.3
Q ss_pred CeEEEEEcCCCCEEEEEeCCC-----cEEEEECCCC
Q psy11104 16 KVNCLAWHQNQGWIAVGGDDG-----LLKVLKLDTV 46 (70)
Q Consensus 16 ~V~~va~spdg~~LasGg~Dg-----~IklWdi~~~ 46 (70)
.+.+++|||||++|+..+.++ .|++||+.++
T Consensus 269 ~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~ 304 (741)
T 1yr2_A 269 RGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNG 304 (741)
T ss_dssp CEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETT
T ss_pred EEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCC
Confidence 588999999999988877554 8999998776
No 197
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=91.91 E-value=0.26 Score=34.84 Aligned_cols=38 Identities=5% Similarity=-0.045 Sum_probs=30.9
Q ss_pred CeEEEEEcCCCC-EEEEEe-CCCcEEEEECCCCCeEEEEE
Q psy11104 16 KVNCLAWHQNQG-WIAVGG-DDGLLKVLKLDTVSLTIMII 53 (70)
Q Consensus 16 ~V~~va~spdg~-~LasGg-~Dg~IklWdi~~~~~~~~~~ 53 (70)
...+++|+|||+ ++++.. .+++|.++|.++.+..-++.
T Consensus 315 ~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~ 354 (368)
T 1mda_H 315 DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVE 354 (368)
T ss_dssp EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECC
T ss_pred CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEE
Confidence 578999999987 567777 69999999999987665443
No 198
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=91.90 E-value=0.4 Score=38.21 Aligned_cols=39 Identities=23% Similarity=0.145 Sum_probs=33.0
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 16 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 16 ~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
.+.+++..++..++.+=+.|+++|+|++.++.+..+...
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~DL 277 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL 277 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEEC
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeech
Confidence 556777788889999999999999999999987776554
No 199
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=91.56 E-value=0.47 Score=30.27 Aligned_cols=33 Identities=6% Similarity=0.143 Sum_probs=28.6
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy11104 15 TKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 15 ~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~ 47 (70)
..+..++++++|.++++...++.|.+||.++++
T Consensus 226 ~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~ 258 (314)
T 1pjx_A 226 GGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQ 258 (314)
T ss_dssp CEEEEEEEBTTCCEEEEEETTTEEEEECTTCBS
T ss_pred CCCCceEECCCCCEEEEEcCCCEEEEEcCCCCc
Confidence 557899999999999998889999999987554
No 200
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=91.32 E-value=0.78 Score=30.57 Aligned_cols=39 Identities=0% Similarity=-0.103 Sum_probs=29.0
Q ss_pred eeecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCe
Q psy11104 8 KIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSL 48 (70)
Q Consensus 8 ~I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~ 48 (70)
.|..+.....+.++|+|++++|..+.. .|.+||.++++.
T Consensus 218 ~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~ 256 (328)
T 3dsm_A 218 QFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRV 256 (328)
T ss_dssp EEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSC
T ss_pred EEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCce
Confidence 344444457899999999888777654 899999887653
No 201
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=91.24 E-value=0.64 Score=31.01 Aligned_cols=41 Identities=12% Similarity=-0.029 Sum_probs=32.4
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEE
Q psy11104 13 NNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMII 53 (70)
Q Consensus 13 ~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~ 53 (70)
.......++++|++++.++...++.|.+||.++.+..-.+.
T Consensus 82 ~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~ 122 (328)
T 3dsm_A 82 GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIE 122 (328)
T ss_dssp CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEE
T ss_pred CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEE
Confidence 35678999999999777776689999999999887554443
No 202
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=91.19 E-value=0.43 Score=34.31 Aligned_cols=41 Identities=10% Similarity=0.131 Sum_probs=31.5
Q ss_pred CCeEEEEEcCCCC-EE-EEEeCCCcEEEEECCCCCeEEEEEec
Q psy11104 15 TKVNCLAWHQNQG-WI-AVGGDDGLLKVLKLDTVSLTIMIILF 55 (70)
Q Consensus 15 ~~V~~va~spdg~-~L-asGg~Dg~IklWdi~~~~~~~~~~~~ 55 (70)
..+++|+++||++ +| ++...++.|.++|..+++..-++...
T Consensus 331 ~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~ 373 (386)
T 3sjl_D 331 HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQL 373 (386)
T ss_dssp EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCC
T ss_pred CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCC
Confidence 3678999999986 54 44567999999999998866555443
No 203
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=91.11 E-value=0.65 Score=30.30 Aligned_cols=38 Identities=8% Similarity=-0.097 Sum_probs=31.4
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEE
Q psy11104 15 TKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMI 52 (70)
Q Consensus 15 ~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~ 52 (70)
+....+++.++|++.++...++.|..||.++++..-.+
T Consensus 199 ~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i 236 (297)
T 3g4e_A 199 QIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTV 236 (297)
T ss_dssp CEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEE
T ss_pred CCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEE
Confidence 46789999999999999888899999999877654443
No 204
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=91.09 E-value=0.59 Score=29.19 Aligned_cols=33 Identities=9% Similarity=-0.050 Sum_probs=28.7
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy11104 15 TKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 15 ~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~ 47 (70)
..+.+|+++++|.++++...++.|.+|+..+..
T Consensus 192 ~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~ 224 (270)
T 1rwi_B 192 TAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTT 224 (270)
T ss_dssp CSEEEEEECTTCCEEEEETTTSCEEEECTTCSC
T ss_pred CCceEEEECCCCCEEEEECCCCcEEEEcCCCCc
Confidence 568899999999999988889999999986654
No 205
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=90.83 E-value=1.5 Score=29.94 Aligned_cols=46 Identities=11% Similarity=0.078 Sum_probs=33.2
Q ss_pred eeecCCCCCeEEEEEcCCCCEEEEEeC--CCcEEEEECCCCCeEEEEE
Q psy11104 8 KIAIPNNTKVNCLAWHQNQGWIAVGGD--DGLLKVLKLDTVSLTIMII 53 (70)
Q Consensus 8 ~I~~~~~~~V~~va~spdg~~LasGg~--Dg~IklWdi~~~~~~~~~~ 53 (70)
.|..+.......++|+||+.+.++.|. +++|++.|.++++..-.+.
T Consensus 14 ~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~ 61 (266)
T 2iwa_A 14 EFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHK 61 (266)
T ss_dssp EEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEE
T ss_pred EEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEe
Confidence 343333345689999999877777664 6799999999998665544
No 206
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=90.73 E-value=0.67 Score=32.42 Aligned_cols=35 Identities=20% Similarity=0.183 Sum_probs=30.0
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeE
Q psy11104 15 TKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLT 49 (70)
Q Consensus 15 ~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~ 49 (70)
....+|+|+|+|+++++...++.|+.||.+++...
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~ 165 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVT 165 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEE
Confidence 35789999999999999888999999999876544
No 207
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=89.71 E-value=0.94 Score=32.74 Aligned_cols=37 Identities=8% Similarity=0.050 Sum_probs=31.4
Q ss_pred CeEEEEEcCCCC-EEEEEe-CCCcEEEEECCCCCeEEEE
Q psy11104 16 KVNCLAWHQNQG-WIAVGG-DDGLLKVLKLDTVSLTIMI 52 (70)
Q Consensus 16 ~V~~va~spdg~-~LasGg-~Dg~IklWdi~~~~~~~~~ 52 (70)
...+|+|+|||+ ++.+.. .++.|.++|.++.+..-++
T Consensus 371 ~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 371 EIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp EECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred CcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 478999999998 777777 6999999999999877654
No 208
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=89.60 E-value=1.1 Score=28.12 Aligned_cols=32 Identities=9% Similarity=0.110 Sum_probs=27.9
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy11104 13 NNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLD 44 (70)
Q Consensus 13 ~~~~V~~va~spdg~~LasGg~Dg~IklWdi~ 44 (70)
+...+.+++++|+|.++++...++.|..||..
T Consensus 13 ~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~ 44 (299)
T 2z2n_A 13 QDTGPYGITVSDKGKVWITQHKANMISCINLD 44 (299)
T ss_dssp SSCCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred cCCCccceEECCCCCEEEEecCCCcEEEEcCC
Confidence 34679999999999998887778999999977
No 209
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=89.54 E-value=0.38 Score=31.85 Aligned_cols=31 Identities=16% Similarity=0.088 Sum_probs=25.7
Q ss_pred CCCEEEEEeCCCcEEEEECCCCCeEEEEEec
Q psy11104 25 NQGWIAVGGDDGLLKVLKLDTVSLTIMIILF 55 (70)
Q Consensus 25 dg~~LasGg~Dg~IklWdi~~~~~~~~~~~~ 55 (70)
.+++|++++.|+.|.+||.++++..-.+...
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~ 34 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLE 34 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECC
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCC
Confidence 3689999999999999999899877665543
No 210
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=88.61 E-value=1.1 Score=31.59 Aligned_cols=37 Identities=14% Similarity=-0.055 Sum_probs=30.6
Q ss_pred EEEEcCCCCEEEEEe----------CCCcEEEEECCCCCeEEEEEec
Q psy11104 19 CLAWHQNQGWIAVGG----------DDGLLKVLKLDTVSLTIMIILF 55 (70)
Q Consensus 19 ~va~spdg~~LasGg----------~Dg~IklWdi~~~~~~~~~~~~ 55 (70)
.++++|||+++..+. .|++|.+||..+.+..-++...
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~ 115 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELP 115 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEET
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECC
Confidence 799999998877765 4789999999999987776553
No 211
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=88.53 E-value=1.7 Score=28.99 Aligned_cols=39 Identities=10% Similarity=-0.138 Sum_probs=30.4
Q ss_pred CCCCeEEEEEcCCCCEEEEEeC-----CCcEEEEECCCCCeEEE
Q psy11104 13 NNTKVNCLAWHQNQGWIAVGGD-----DGLLKVLKLDTVSLTIM 51 (70)
Q Consensus 13 ~~~~V~~va~spdg~~LasGg~-----Dg~IklWdi~~~~~~~~ 51 (70)
+-..+.+|+++|+|+++++-.. ++.|.+||+++++..-.
T Consensus 65 ~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~ 108 (343)
T 2qe8_A 65 TFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRV 108 (343)
T ss_dssp CCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEE
T ss_pred ceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEE
Confidence 4467999999999988776544 68899999988764433
No 212
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=88.05 E-value=1.3 Score=31.72 Aligned_cols=37 Identities=8% Similarity=-0.050 Sum_probs=29.4
Q ss_pred CeEEEEEcCCCCEEEEEeC--CCcEEEEECCCCCeEEEE
Q psy11104 16 KVNCLAWHQNQGWIAVGGD--DGLLKVLKLDTVSLTIMI 52 (70)
Q Consensus 16 ~V~~va~spdg~~LasGg~--Dg~IklWdi~~~~~~~~~ 52 (70)
....++|+|||+++..+.. ++.|.++|+++.+..-++
T Consensus 138 ~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI 176 (386)
T 3sjl_D 138 YPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRML 176 (386)
T ss_dssp CGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEE
T ss_pred CCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEE
Confidence 4556899999998777653 689999999998865554
No 213
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=87.81 E-value=1.7 Score=28.28 Aligned_cols=33 Identities=21% Similarity=0.256 Sum_probs=26.5
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCe
Q psy11104 14 NTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSL 48 (70)
Q Consensus 14 ~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~ 48 (70)
...+.+++++|+|+++++. ++.|.+||.++++.
T Consensus 53 ~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~~ 85 (297)
T 3g4e_A 53 DAPVSSVALRQSGGYVATI--GTKFCALNWKEQSA 85 (297)
T ss_dssp SSCEEEEEEBTTSSEEEEE--TTEEEEEETTTTEE
T ss_pred CCceEEEEECCCCCEEEEE--CCeEEEEECCCCcE
Confidence 4678999999999977664 56799999887654
No 214
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=87.80 E-value=1.9 Score=26.85 Aligned_cols=32 Identities=13% Similarity=0.133 Sum_probs=27.6
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy11104 13 NNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLD 44 (70)
Q Consensus 13 ~~~~V~~va~spdg~~LasGg~Dg~IklWdi~ 44 (70)
+...+.+++++++|.++++...++.|..||.+
T Consensus 55 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~ 86 (299)
T 2z2n_A 55 PDAKVMCLTISSDGEVWFTENAANKIGRITKK 86 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred ccCceeeEEECCCCCEEEeCCCCCeEEEECCC
Confidence 34678999999999999988888999999876
No 215
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=87.71 E-value=0.94 Score=29.57 Aligned_cols=32 Identities=13% Similarity=0.082 Sum_probs=24.9
Q ss_pred CeEEEEEcCCCCEEEEEeCC------CcEEEEECCCCC
Q psy11104 16 KVNCLAWHQNQGWIAVGGDD------GLLKVLKLDTVS 47 (70)
Q Consensus 16 ~V~~va~spdg~~LasGg~D------g~IklWdi~~~~ 47 (70)
..+.++|+||++.|..+..+ +.|+.|++..+.
T Consensus 189 ~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~ 226 (305)
T 3dr2_A 189 HPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA 226 (305)
T ss_dssp SEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE
T ss_pred CCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC
Confidence 45789999999977666554 789999987654
No 216
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=87.05 E-value=1.5 Score=32.71 Aligned_cols=38 Identities=13% Similarity=0.255 Sum_probs=30.6
Q ss_pred CCCCeEEEEEcCC---CCEEEEEeCCCcEEEEECCC-CCeEE
Q psy11104 13 NNTKVNCLAWHQN---QGWIAVGGDDGLLKVLKLDT-VSLTI 50 (70)
Q Consensus 13 ~~~~V~~va~spd---g~~LasGg~Dg~IklWdi~~-~~~~~ 50 (70)
...+|..+-|||- +..|+.=.+|+.||+||+.. .+.+.
T Consensus 123 ~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~ 164 (452)
T 3pbp_A 123 PKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI 164 (452)
T ss_dssp CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE
T ss_pred CCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc
Confidence 3678999999996 45788889999999999975 33444
No 217
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=86.63 E-value=2 Score=27.89 Aligned_cols=32 Identities=13% Similarity=-0.013 Sum_probs=27.0
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy11104 13 NNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLD 44 (70)
Q Consensus 13 ~~~~V~~va~spdg~~LasGg~Dg~IklWdi~ 44 (70)
+...+++++++|+|+++++...++.|.+|+.+
T Consensus 84 ~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~ 115 (305)
T 3dr2_A 84 ATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD 115 (305)
T ss_dssp SCSCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred CCCccceeeECCCCCEEEEECCCCEEEEECCC
Confidence 35568999999999988887777889999976
No 218
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=86.28 E-value=0.53 Score=35.52 Aligned_cols=31 Identities=10% Similarity=0.013 Sum_probs=24.4
Q ss_pred CeEEEEEc-CCCCEEEEEeC-----CCcEEEEECCCC
Q psy11104 16 KVNCLAWH-QNQGWIAVGGD-----DGLLKVLKLDTV 46 (70)
Q Consensus 16 ~V~~va~s-pdg~~LasGg~-----Dg~IklWdi~~~ 46 (70)
.+...+|| |||++||-+.+ ...|+++|+.++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g 211 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDP 211 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCT
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCC
Confidence 57789999 99999885432 235999999988
No 219
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=86.23 E-value=1.1 Score=29.91 Aligned_cols=34 Identities=3% Similarity=0.010 Sum_probs=28.7
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy11104 14 NTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 14 ~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~ 47 (70)
.+....++++++|.++++...++.|.+||.++++
T Consensus 247 ~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~ 280 (343)
T 2qe8_A 247 KPICDGISIDKDHNIYVGDLAHSAIGVITSADRA 280 (343)
T ss_dssp CCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTE
T ss_pred CCCCceEEECCCCCEEEEccCCCeEEEEECCCCC
Confidence 3456789999999999999999999999985554
No 220
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=86.13 E-value=1 Score=29.68 Aligned_cols=38 Identities=5% Similarity=-0.001 Sum_probs=30.1
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 16 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 16 ~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
....++..++|+++++.+.++.|..||.+ ++..-.+..
T Consensus 126 ~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~ 163 (276)
T 3no2_A 126 QFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKL 163 (276)
T ss_dssp SCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEEC
T ss_pred cccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEEC
Confidence 34566788999999999999999999987 776555443
No 221
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=86.02 E-value=1.8 Score=29.88 Aligned_cols=34 Identities=9% Similarity=-0.268 Sum_probs=27.3
Q ss_pred eEEEEEcCCCCEEEEEeC--CCcEEEEECCCCCeEEE
Q psy11104 17 VNCLAWHQNQGWIAVGGD--DGLLKVLKLDTVSLTIM 51 (70)
Q Consensus 17 V~~va~spdg~~LasGg~--Dg~IklWdi~~~~~~~~ 51 (70)
...++|+|||++|..++. ++.|.++| ++++..-.
T Consensus 127 p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~ 162 (373)
T 2mad_H 127 SWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQ 162 (373)
T ss_pred ccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeE
Confidence 457899999999888764 57899999 88876544
No 222
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=85.82 E-value=2.4 Score=29.49 Aligned_cols=33 Identities=15% Similarity=0.186 Sum_probs=28.6
Q ss_pred CeEEEEEcCCCCEEEEEe-CCCcEEEEECCCCCe
Q psy11104 16 KVNCLAWHQNQGWIAVGG-DDGLLKVLKLDTVSL 48 (70)
Q Consensus 16 ~V~~va~spdg~~LasGg-~Dg~IklWdi~~~~~ 48 (70)
....++++|+|+++++-+ .++.|+.|+..++..
T Consensus 324 ~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v 357 (409)
T 3hrp_A 324 QPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV 357 (409)
T ss_dssp SEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE
T ss_pred CCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE
Confidence 478999999999999988 899999999876653
No 223
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=85.77 E-value=2.8 Score=28.82 Aligned_cols=42 Identities=19% Similarity=0.308 Sum_probs=33.3
Q ss_pred CCCCC--eEEEEEcCCCCEEEEEeCCC--cEEEEECCCCCeEEEEEe
Q psy11104 12 PNNTK--VNCLAWHQNQGWIAVGGDDG--LLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 12 ~~~~~--V~~va~spdg~~LasGg~Dg--~IklWdi~~~~~~~~~~~ 54 (70)
||... ...+.|+ ++.+..|.|.+| .|+..|+++++..-++..
T Consensus 38 phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l 83 (262)
T 3nol_A 38 PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIEL 83 (262)
T ss_dssp ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEEC
T ss_pred cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEec
Confidence 55544 4899998 788889999887 999999999987665543
No 224
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=85.15 E-value=2.6 Score=31.17 Aligned_cols=41 Identities=7% Similarity=-0.007 Sum_probs=31.2
Q ss_pred CCCeEEEEEcCCCCEEEE-EeCCCcEEEEECCCCCeEEEEEe
Q psy11104 14 NTKVNCLAWHQNQGWIAV-GGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 14 ~~~V~~va~spdg~~Las-Gg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
.....++.|+|+|+++.. ...++.|.++|.++++..-.+..
T Consensus 341 ~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~v 382 (567)
T 1qks_A 341 ERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDT 382 (567)
T ss_dssp CSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEEC
T ss_pred cccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEec
Confidence 445678899999998654 45788999999999876555444
No 225
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=83.48 E-value=3.6 Score=25.60 Aligned_cols=31 Identities=3% Similarity=-0.064 Sum_probs=27.6
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy11104 14 NTKVNCLAWHQNQGWIAVGGDDGLLKVLKLD 44 (70)
Q Consensus 14 ~~~V~~va~spdg~~LasGg~Dg~IklWdi~ 44 (70)
...+.+++++++|.++++...++.|.++|..
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~ 49 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQHKANKISSLDQS 49 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred CCCcceeeECCCCCEEEEcCCCCeEEEECCC
Confidence 4578999999999999988888999999977
No 226
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=83.12 E-value=2.9 Score=32.86 Aligned_cols=38 Identities=16% Similarity=0.306 Sum_probs=30.7
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 15 TKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 15 ~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
..|.|+.+ +..++++=+.|.++|+|+++++........
T Consensus 222 ~~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 222 SVISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp CEEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred ceEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 34666655 478999999999999999999987776665
No 227
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=82.70 E-value=1.3 Score=33.28 Aligned_cols=35 Identities=14% Similarity=-0.018 Sum_probs=28.2
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 20 LAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 20 va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
-.+...+.+++.|+.||.++.||.+++++.-.+..
T Consensus 480 g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~ 514 (689)
T 1yiq_A 480 GTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPA 514 (689)
T ss_dssp CEEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred ccceECCCEEEEECCCCcEEEEECCCCccceeeeC
Confidence 35556788999999999999999999987655443
No 228
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=82.06 E-value=1.5 Score=32.93 Aligned_cols=39 Identities=15% Similarity=-0.058 Sum_probs=30.6
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 16 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 16 ~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
++++..+.+++.+++.|+.||.+++||.++++..-.+..
T Consensus 478 ~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~ 516 (677)
T 1kb0_A 478 PWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPT 516 (677)
T ss_dssp SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeC
Confidence 344445666788889999999999999999987766554
No 229
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=81.97 E-value=4.3 Score=26.52 Aligned_cols=33 Identities=18% Similarity=0.104 Sum_probs=27.4
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Q psy11104 14 NTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTV 46 (70)
Q Consensus 14 ~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~ 46 (70)
.....+++|+|+|+++++-..++.|..+|.++.
T Consensus 31 ~~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~ 63 (306)
T 2p4o_A 31 NTFLENLASAPDGTIFVTNHEVGEIVSITPDGN 63 (306)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTTCC
T ss_pred CCCcceEEECCCCCEEEEeCCCCeEEEECCCCc
Confidence 466889999999998888778899998887654
No 230
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=81.85 E-value=4.5 Score=25.12 Aligned_cols=31 Identities=16% Similarity=0.107 Sum_probs=27.0
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy11104 14 NTKVNCLAWHQNQGWIAVGGDDGLLKVLKLD 44 (70)
Q Consensus 14 ~~~V~~va~spdg~~LasGg~Dg~IklWdi~ 44 (70)
...+.+++++++|.++++...++.|..+|.+
T Consensus 61 ~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~ 91 (300)
T 2qc5_A 61 DAKVMCLIVSSLGDIWFTENGANKIGKLSKK 91 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred CCcceeEEECCCCCEEEEecCCCeEEEECCC
Confidence 3678999999999998888778999999977
No 231
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=80.59 E-value=3.6 Score=28.04 Aligned_cols=30 Identities=20% Similarity=0.129 Sum_probs=24.4
Q ss_pred CCCEEEEEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 25 NQGWIAVGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 25 dg~~LasGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
++..+++|+.||.|+.||.++++..-....
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~ 37 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE 37 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC
Confidence 578899999999999999999887655443
No 232
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=79.51 E-value=4.8 Score=27.79 Aligned_cols=40 Identities=23% Similarity=0.365 Sum_probs=32.0
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEE
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMI 52 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~ 52 (70)
+-......+.|+ ++.+..|.|.+|.|+..|+++++..-.+
T Consensus 52 d~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~ 91 (268)
T 3nok_A 52 ATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME 91 (268)
T ss_dssp CTTCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE
T ss_pred CCccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE
Confidence 334556899997 4788899999999999999998866655
No 233
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=79.30 E-value=2.3 Score=27.88 Aligned_cols=40 Identities=13% Similarity=0.076 Sum_probs=29.9
Q ss_pred eeecCCC-CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy11104 8 KIAIPNN-TKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 8 ~I~~~~~-~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~ 47 (70)
.|..+.. ....+++|+++|.++.++..++.|..||..++.
T Consensus 11 ~i~~~g~~~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~ 51 (322)
T 2fp8_A 11 EILIEAPSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSG 51 (322)
T ss_dssp EEEEECSSSCCCCEECCTTCSSEEEECTTSEEEEECCTTTC
T ss_pred eeecCCccCCceEEEEcCCCCEEEEEcCCCeEEEECCCCCc
Confidence 3444422 346789999999977788889999999887654
No 234
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=78.59 E-value=4.3 Score=29.96 Aligned_cols=33 Identities=9% Similarity=0.129 Sum_probs=24.3
Q ss_pred CCeEEEEEcCCCCEEEEEe----CCCcEEEEECCCCC
Q psy11104 15 TKVNCLAWHQNQGWIAVGG----DDGLLKVLKLDTVS 47 (70)
Q Consensus 15 ~~V~~va~spdg~~LasGg----~Dg~IklWdi~~~~ 47 (70)
....+++|+|||++|+..+ .+..|+++|++++.
T Consensus 234 ~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~ 270 (693)
T 3iuj_A 234 HRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQEN 270 (693)
T ss_dssp CSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTT
T ss_pred eEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCC
Confidence 3467899999999875432 33589999987764
No 235
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=78.36 E-value=3.7 Score=27.18 Aligned_cols=32 Identities=9% Similarity=-0.162 Sum_probs=26.3
Q ss_pred CeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCC
Q psy11104 16 KVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 16 ~V~~va~spd-g~~LasGg~Dg~IklWdi~~~~ 47 (70)
...+.+|+|+ +.++.++..++.|..||.+++.
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~ 82 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGR 82 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTE
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCc
Confidence 4578999998 5677888888999999988764
No 236
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=78.23 E-value=4.7 Score=29.03 Aligned_cols=36 Identities=14% Similarity=0.043 Sum_probs=28.7
Q ss_pred EEEEcCCCCEEEEEe----------CCCcEEEEECCCCCeEEEEEe
Q psy11104 19 CLAWHQNQGWIAVGG----------DDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 19 ~va~spdg~~LasGg----------~Dg~IklWdi~~~~~~~~~~~ 54 (70)
.++++|||++|..+. .++.|.++|..+.+..-.+..
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v 167 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIEL 167 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEE
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEEC
Confidence 899999998776654 478999999999887655543
No 237
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=77.90 E-value=13 Score=24.98 Aligned_cols=39 Identities=13% Similarity=0.132 Sum_probs=31.1
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCC--cEEEEECCCCCeEEEEE
Q psy11104 14 NTKVNCLAWHQNQGWIAVGGDDG--LLKVLKLDTVSLTIMII 53 (70)
Q Consensus 14 ~~~V~~va~spdg~~LasGg~Dg--~IklWdi~~~~~~~~~~ 53 (70)
......+.|+. +.+..|.|.+| .|+..|+++++..-++.
T Consensus 20 ~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~ 60 (243)
T 3mbr_X 20 TAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAE 60 (243)
T ss_dssp TCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEE
T ss_pred ccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEe
Confidence 45677999986 67888888876 99999999998765554
No 238
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=77.66 E-value=0.75 Score=31.50 Aligned_cols=34 Identities=18% Similarity=0.020 Sum_probs=18.2
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeE
Q psy11104 16 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLT 49 (70)
Q Consensus 16 ~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~ 49 (70)
.+.+..+.+++..+++++.||.|+.||.++++..
T Consensus 39 ~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~ 72 (369)
T 2hz6_A 39 PVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGL 72 (369)
T ss_dssp CSCCCC-----CCEEECTTTCCEEEC-----CCS
T ss_pred CceecceEcCCCEEEEeCCCCEEEEEECCCCcee
Confidence 3444445567778888899999999999877653
No 239
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=74.61 E-value=4.2 Score=29.86 Aligned_cols=37 Identities=11% Similarity=0.119 Sum_probs=27.8
Q ss_pred CCCCeEEEEEcCCCCEEEEEeC-CCcEEEEECCCCCeE
Q psy11104 13 NNTKVNCLAWHQNQGWIAVGGD-DGLLKVLKLDTVSLT 49 (70)
Q Consensus 13 ~~~~V~~va~spdg~~LasGg~-Dg~IklWdi~~~~~~ 49 (70)
+.....++++.++|++++.||. ++.+++||..++++.
T Consensus 241 ~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~ 278 (656)
T 1k3i_A 241 HDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWI 278 (656)
T ss_dssp CCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEE
T ss_pred CCCccccccCCCCCCEEEeCCCCCCceEEecCcCCcee
Confidence 3344456788899999999984 558999998877644
No 240
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=73.57 E-value=11 Score=24.74 Aligned_cols=30 Identities=7% Similarity=-0.010 Sum_probs=25.2
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECC
Q psy11104 15 TKVNCLAWHQNQGWIAVGGDDGLLKVLKLD 44 (70)
Q Consensus 15 ~~V~~va~spdg~~LasGg~Dg~IklWdi~ 44 (70)
+...++++.++|.++++...++.|..||..
T Consensus 230 ~~p~gi~~d~~G~lwva~~~~~~v~~~d~~ 259 (326)
T 2ghs_A 230 GGMDGSVCDAEGHIWNARWGEGAVDRYDTD 259 (326)
T ss_dssp SEEEEEEECTTSCEEEEEETTTEEEEECTT
T ss_pred CCCCeeEECCCCCEEEEEeCCCEEEEECCC
Confidence 456789999999998887778899999973
No 241
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=70.37 E-value=7.7 Score=27.33 Aligned_cols=32 Identities=6% Similarity=-0.026 Sum_probs=24.3
Q ss_pred CCeEEEEEcCCCCEE-EEEeCCCcEEEEECCCC
Q psy11104 15 TKVNCLAWHQNQGWI-AVGGDDGLLKVLKLDTV 46 (70)
Q Consensus 15 ~~V~~va~spdg~~L-asGg~Dg~IklWdi~~~ 46 (70)
..-|.|+||||++.| ++-+..+.|..++++.+
T Consensus 221 ~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~ 253 (355)
T 3sre_A 221 DFANGINISPDGKYVYIAELLAHKIHVYEKHAN 253 (355)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEEECTT
T ss_pred cccCcceECCCCCEEEEEeCCCCeEEEEEECCC
Confidence 346899999998765 44556789999998643
No 242
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=68.54 E-value=25 Score=24.62 Aligned_cols=34 Identities=12% Similarity=-0.011 Sum_probs=27.3
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCe
Q psy11104 15 TKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSL 48 (70)
Q Consensus 15 ~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~ 48 (70)
...+.++|.|||.++++--..|.|++++..++..
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~ 65 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRK 65 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCE
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcE
Confidence 4568999999999988876689999998665543
No 243
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=64.34 E-value=8.8 Score=25.00 Aligned_cols=30 Identities=3% Similarity=-0.118 Sum_probs=23.1
Q ss_pred CeEEEEEcCCCCE-EEEEeCCCcEEEEECCC
Q psy11104 16 KVNCLAWHQNQGW-IAVGGDDGLLKVLKLDT 45 (70)
Q Consensus 16 ~V~~va~spdg~~-LasGg~Dg~IklWdi~~ 45 (70)
..+.|+|+|+|++ +++-..++.|..+++.+
T Consensus 186 ~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~ 216 (322)
T 2fp8_A 186 VPGGAEVSADSSFVLVAEFLSHQIVKYWLEG 216 (322)
T ss_dssp CCCEEEECTTSSEEEEEEGGGTEEEEEESSS
T ss_pred cCcceEECCCCCEEEEEeCCCCeEEEEECCC
Confidence 3568999999885 45556678999999875
No 244
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=60.43 E-value=18 Score=27.14 Aligned_cols=32 Identities=9% Similarity=0.103 Sum_probs=23.2
Q ss_pred CCeEEEEEcCCCCEEEEEeC---CCcEEEEECCCC
Q psy11104 15 TKVNCLAWHQNQGWIAVGGD---DGLLKVLKLDTV 46 (70)
Q Consensus 15 ~~V~~va~spdg~~LasGg~---Dg~IklWdi~~~ 46 (70)
.....++|||||++|+..+. ...|.++|+.++
T Consensus 271 ~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 271 LFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp TCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred ceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 44567899999998876552 336777888765
No 245
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=60.38 E-value=23 Score=23.55 Aligned_cols=34 Identities=9% Similarity=0.121 Sum_probs=23.6
Q ss_pred eecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy11104 9 IAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLK 42 (70)
Q Consensus 9 I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWd 42 (70)
+..+....+.+++++|++.+++.|...+..+-+|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d 190 (327)
T 2xbg_A 157 LVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWE 190 (327)
T ss_dssp EECSCCCCEEEEEECTTSCEEEEETTSSEEEEEC
T ss_pred eecCCCcceEEEEEcCCCcEEEEECCCcEEEEeC
Confidence 3345566799999999999888875444444444
No 246
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=59.41 E-value=10 Score=28.18 Aligned_cols=34 Identities=9% Similarity=0.034 Sum_probs=26.9
Q ss_pred EEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 21 AWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 21 a~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
.+...+.++..|+.||.++.||.++++..-.+..
T Consensus 464 ~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~ 497 (668)
T 1kv9_A 464 TLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEA 497 (668)
T ss_dssp EEEETTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred eeEeCCCEEEEECCcccchhhhhhcChhheEecC
Confidence 3444678888999999999999999987766544
No 247
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=58.02 E-value=6.1 Score=30.22 Aligned_cols=32 Identities=9% Similarity=0.069 Sum_probs=25.8
Q ss_pred CCeEEEEEcCCCCE-EEEEeCCCcEEEEECCCC
Q psy11104 15 TKVNCLAWHQNQGW-IAVGGDDGLLKVLKLDTV 46 (70)
Q Consensus 15 ~~V~~va~spdg~~-LasGg~Dg~IklWdi~~~ 46 (70)
....++.++|||++ ++++..+.+|.++|+++.
T Consensus 277 ~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~ 309 (595)
T 1fwx_A 277 NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRF 309 (595)
T ss_dssp SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGH
T ss_pred CCceEEEEcCCCCEEEEeCCCCCeEEEEECccc
Confidence 35678999999997 555668889999998854
No 248
>3rd7_A Acyl-COA thioesterase; seattle structur genomics center for infectious disease, ssgcid, hydrolase; 1.95A {Mycobacterium avium}
Probab=54.38 E-value=3.7 Score=27.96 Aligned_cols=26 Identities=4% Similarity=0.183 Sum_probs=21.2
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEE
Q psy11104 15 TKVNCLAWHQNQGWIAVGGDDGLLKV 40 (70)
Q Consensus 15 ~~V~~va~spdg~~LasGg~Dg~Ikl 40 (70)
+.+.+--|+++|+++||+..+|.||.
T Consensus 258 ~~~~g~i~~~~G~LVAs~~Qegl~R~ 283 (286)
T 3rd7_A 258 GLATGTLYNRSGELVCIATQEGYFAE 283 (286)
T ss_dssp EEEEEEEEETTSCEEEEEEEEEEECC
T ss_pred EEEEEEEECCCCCEEEEEEehheeec
Confidence 34556679999999999999998874
No 249
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=54.03 E-value=13 Score=25.39 Aligned_cols=35 Identities=11% Similarity=-0.029 Sum_probs=23.3
Q ss_pred eeeeeecCCCCCeEEEEEcCCCCEEEEEeCCCcEEEEEC
Q psy11104 5 LSKKIAIPNNTKVNCLAWHQNQGWIAVGGDDGLLKVLKL 43 (70)
Q Consensus 5 ~~~~I~~~~~~~V~~va~spdg~~LasGg~Dg~IklWdi 43 (70)
+..+|.+.-=..+..++|+|||.+.|. .+|. ||..
T Consensus 31 ~a~~iG~~gw~~~~~laf~P~G~LYaV--~~G~--Ly~~ 65 (236)
T 1tl2_A 31 RATLIGKGGWSNFKFLFLSPGGELYGV--LNDK--IYKG 65 (236)
T ss_dssp HSEEEESSSCTTCSEEEECTTSCEEEE--ETTE--EEEE
T ss_pred hccccCccccccceeEEECCCccEEEE--eCCe--EEEE
Confidence 445555532346789999999998887 5665 4543
No 250
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=53.24 E-value=27 Score=23.34 Aligned_cols=32 Identities=13% Similarity=0.179 Sum_probs=26.4
Q ss_pred CCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCC
Q psy11104 15 TKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTV 46 (70)
Q Consensus 15 ~~V~~va~spd-g~~LasGg~Dg~IklWdi~~~ 46 (70)
..+.+++++|. +.+++...+.+.+-..|.+..
T Consensus 173 ~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~ 205 (255)
T 3qqz_A 173 DDVSGAEFNQQKNTLLVLSHESRALQEVTLVGE 205 (255)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEECTTCC
T ss_pred CCceeEEEcCCCCeEEEEECCCCeEEEEcCCCC
Confidence 46789999998 778888888889999997655
No 251
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=52.72 E-value=36 Score=21.27 Aligned_cols=32 Identities=9% Similarity=-0.126 Sum_probs=24.6
Q ss_pred CeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCC
Q psy11104 16 KVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 16 ~V~~va~spd-g~~LasGg~Dg~IklWdi~~~~ 47 (70)
.+.+++|+|+ +.++++-..++.|..++..+..
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~ 69 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGE 69 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCC
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCC
Confidence 3568999997 5566677778899999987654
No 252
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=52.21 E-value=49 Score=23.54 Aligned_cols=33 Identities=15% Similarity=0.210 Sum_probs=24.9
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy11104 15 TKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 15 ~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~ 47 (70)
...++++|.|+|.++++-...+.|++++..++.
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~ 59 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGS 59 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCC
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCc
Confidence 356899999999998886555578888765444
No 253
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=52.10 E-value=17 Score=26.53 Aligned_cols=31 Identities=10% Similarity=-0.056 Sum_probs=24.2
Q ss_pred EEEEcC-CCCEEEEEeCCC-----------cEEEEECCCCCeE
Q psy11104 19 CLAWHQ-NQGWIAVGGDDG-----------LLKVLKLDTVSLT 49 (70)
Q Consensus 19 ~va~sp-dg~~LasGg~Dg-----------~IklWdi~~~~~~ 49 (70)
++++.| +|++++.||.++ .+.+||..++++.
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~ 232 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVS 232 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBC
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEE
Confidence 667778 899999998654 5889998887743
No 254
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=50.93 E-value=27 Score=25.65 Aligned_cols=29 Identities=14% Similarity=0.143 Sum_probs=24.2
Q ss_pred CCEEEEEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 26 QGWIAVGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 26 g~~LasGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
+.++..|+.||.++.+|.+++++.-....
T Consensus 497 gglvf~g~~dg~l~A~D~~tG~~lW~~~~ 525 (582)
T 1flg_A 497 GNLVFTGTGDGYFKAFDAKSGKELWKFQT 525 (582)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEECCCCcEEEEECCCCCEEEEecC
Confidence 56788899999999999999997766544
No 255
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=50.40 E-value=31 Score=24.62 Aligned_cols=40 Identities=10% Similarity=0.087 Sum_probs=26.4
Q ss_pred CCCeEEEEEcCCCC-EEEEEeCCCcEE------EEECCCCCeEEEEE
Q psy11104 14 NTKVNCLAWHQNQG-WIAVGGDDGLLK------VLKLDTVSLTIMII 53 (70)
Q Consensus 14 ~~~V~~va~spdg~-~LasGg~Dg~Ik------lWdi~~~~~~~~~~ 53 (70)
...+..|++.|||. ++++-+..|.|. +|+++.....+.+.
T Consensus 404 ~~R~~dv~~gpDG~~Lyv~~d~~G~i~~~~~~~~~~~~~~~~i~~~~ 450 (454)
T 1cru_A 404 NNRYRDVIASPDGNVLYVLTDTAGNVQKDDGSVTNTLENPGSLIKFT 450 (454)
T ss_dssp SSCEEEEEECTTSSCEEEEECSSCCEECTTSCEECCCSSTTCEEEEC
T ss_pred CCCceeEEECCCCCEEEEEECCCCCCccCCCceeEeccCCCceEEEE
Confidence 35889999999997 665545556554 66666555554443
No 256
>3u0a_A Acyl-COA thioesterase II TESB2; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, hydrolase; 2.50A {Mycobacterium marinum}
Probab=49.65 E-value=6.5 Score=26.71 Aligned_cols=27 Identities=15% Similarity=0.122 Sum_probs=22.3
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEE
Q psy11104 15 TKVNCLAWHQNQGWIAVGGDDGLLKVL 41 (70)
Q Consensus 15 ~~V~~va~spdg~~LasGg~Dg~IklW 41 (70)
+.+.+-=|+++|+++|++..+|.||.-
T Consensus 251 gl~~g~i~~~~G~LVAs~~QeglvR~~ 277 (285)
T 3u0a_A 251 ALTHGKIFTQGGELVAAVMQEGLTRYP 277 (285)
T ss_dssp EEEEEEEEETTCCEEEEEEEEEEEECC
T ss_pred EEEEEEEECCCCCEEEEEEeeEEEEec
Confidence 345566799999999999999999874
No 257
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=48.89 E-value=25 Score=26.09 Aligned_cols=36 Identities=6% Similarity=0.028 Sum_probs=27.0
Q ss_pred eEEEEEcCCCCEEEEEe-------------------CCCcEEEEECCCCCeEEEE
Q psy11104 17 VNCLAWHQNQGWIAVGG-------------------DDGLLKVLKLDTVSLTIMI 52 (70)
Q Consensus 17 V~~va~spdg~~LasGg-------------------~Dg~IklWdi~~~~~~~~~ 52 (70)
-+.+-|+|+++.+++.. .+.+|.+||+.+++..-++
T Consensus 190 ~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI 244 (462)
T 2ece_A 190 AYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSL 244 (462)
T ss_dssp CCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEE
T ss_pred cceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEE
Confidence 34578899999888863 3789999999886544333
No 258
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=48.20 E-value=30 Score=23.45 Aligned_cols=27 Identities=15% Similarity=0.121 Sum_probs=21.7
Q ss_pred CeEEEEEcCCCC-EEEEEeCCCcEEEEEC
Q psy11104 16 KVNCLAWHQNQG-WIAVGGDDGLLKVLKL 43 (70)
Q Consensus 16 ~V~~va~spdg~-~LasGg~Dg~IklWdi 43 (70)
....|+|.|+|. ++++ ..+|.|++++.
T Consensus 19 ~P~~i~~~pdG~~l~V~-e~~G~i~~~~~ 46 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLIT-LRGGELRHWQA 46 (353)
T ss_dssp SEEEEEECSTTCCEEEE-ETTTEEEEEET
T ss_pred CcEEEEEcCCCCEEEEE-eCCceEEEEeC
Confidence 468999999999 6665 56789998874
No 259
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=47.95 E-value=22 Score=25.21 Aligned_cols=30 Identities=7% Similarity=0.136 Sum_probs=24.8
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q psy11104 16 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDT 45 (70)
Q Consensus 16 ~V~~va~spdg~~LasGg~Dg~IklWdi~~ 45 (70)
..+.|+++|+|.+|+....+|.+.-+|++.
T Consensus 186 G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 186 GYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp SCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred CcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 367999999998877776699999999774
No 260
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=47.57 E-value=49 Score=26.76 Aligned_cols=34 Identities=26% Similarity=0.287 Sum_probs=28.0
Q ss_pred CCCeEEEEEcCC------CCEEEEEeC-CCcEEEEECCCCC
Q psy11104 14 NTKVNCLAWHQN------QGWIAVGGD-DGLLKVLKLDTVS 47 (70)
Q Consensus 14 ~~~V~~va~spd------g~~LasGg~-Dg~IklWdi~~~~ 47 (70)
...|.|+++.|. +.++|.|.. |++|+|.++.+-+
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~ 593 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFE 593 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCC
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCC
Confidence 457999999874 368999996 9999999997644
No 261
>1zso_A Hypothetical protein; structural genomics, PSI, protein structure initiative, STRU genomics of pathogenic protozoa consortium, SGPP; 2.17A {Plasmodium falciparum} SCOP: b.166.1.1
Probab=47.04 E-value=36 Score=21.85 Aligned_cols=30 Identities=10% Similarity=0.215 Sum_probs=21.5
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Q psy11104 17 VNCLAWHQNQGWIAVGGDDGLLKVLKLDTV 46 (70)
Q Consensus 17 V~~va~spdg~~LasGg~Dg~IklWdi~~~ 46 (70)
+.-+.|+|++.+.|.|.+.|...=.|+..+
T Consensus 112 lEp~eF~p~~~w~a~~~esG~f~dvDLse~ 141 (164)
T 1zso_A 112 IELIDFFPSNNFIVEDTKGKLYYDVNLSDQ 141 (164)
T ss_dssp EEEEEECCCSCEEEEETTSCEEEEECCTTS
T ss_pred eeeEEEecCCcEEEEECCCCcEEeeecCCC
Confidence 456889999999999877773333455544
No 262
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=46.47 E-value=17 Score=26.55 Aligned_cols=30 Identities=20% Similarity=0.119 Sum_probs=24.1
Q ss_pred CCCEEEEEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 25 NQGWIAVGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 25 dg~~LasGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
.+.++..|+.||.++.+|.+++++.-.+..
T Consensus 474 ~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~ 503 (571)
T 2ad6_A 474 KGGLVWYATLDGYLKALDNKDGKELWNFKM 503 (571)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CCCEEEEEcCCCeEEEEECCCCCEEEEEeC
Confidence 356777789999999999999987766544
No 263
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=45.90 E-value=35 Score=23.07 Aligned_cols=27 Identities=15% Similarity=0.307 Sum_probs=22.0
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy11104 15 TKVNCLAWHQNQGWIAVGGDDGLLKVLK 42 (70)
Q Consensus 15 ~~V~~va~spdg~~LasGg~Dg~IklWd 42 (70)
...++++|.|+|.++++ ..+|.|++++
T Consensus 31 ~~P~~ia~~pdG~l~V~-e~~g~I~~i~ 57 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIA-ERPGRIRLFR 57 (352)
T ss_dssp SCEEEEEECTTSCEEEE-ETTTEEEEEE
T ss_pred CCceEEEEcCCCeEEEE-eCCCeEEEEE
Confidence 35689999999997776 4569999988
No 264
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=43.91 E-value=32 Score=24.07 Aligned_cols=31 Identities=10% Similarity=-0.071 Sum_probs=24.6
Q ss_pred CCeEEEEEcCCCC-EEEEEeCCCcEEEEECCC
Q psy11104 15 TKVNCLAWHQNQG-WIAVGGDDGLLKVLKLDT 45 (70)
Q Consensus 15 ~~V~~va~spdg~-~LasGg~Dg~IklWdi~~ 45 (70)
...+.|+|+|+|+ ++++-...+.|..++...
T Consensus 270 ~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 270 GWEFHIQFHPSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp SCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred CcceeEEEcCCCCEEEEEECCCCEEEEEeCCc
Confidence 3467899999998 566667788999988764
No 265
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=42.73 E-value=65 Score=20.69 Aligned_cols=34 Identities=24% Similarity=0.238 Sum_probs=23.0
Q ss_pred CCeEEEEEcCCCCEEEEEeCCC--cEEEEECCCCCe
Q psy11104 15 TKVNCLAWHQNQGWIAVGGDDG--LLKVLKLDTVSL 48 (70)
Q Consensus 15 ~~V~~va~spdg~~LasGg~Dg--~IklWdi~~~~~ 48 (70)
..+.++++.|+|+++++..... .|..+|..+++.
T Consensus 72 ~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~ 107 (306)
T 2p4o_A 72 GKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTV 107 (306)
T ss_dssp SEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCE
T ss_pred CCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeE
Confidence 4578999999999877664433 355556666653
No 266
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=39.94 E-value=63 Score=23.91 Aligned_cols=31 Identities=6% Similarity=0.103 Sum_probs=24.3
Q ss_pred CCeEEEEEcCCCCEEEEE-eCCCcEEEEECCC
Q psy11104 15 TKVNCLAWHQNQGWIAVG-GDDGLLKVLKLDT 45 (70)
Q Consensus 15 ~~V~~va~spdg~~LasG-g~Dg~IklWdi~~ 45 (70)
.....|.+||||++|-.+ -..+.|.++|+..
T Consensus 321 ~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d 352 (462)
T 2ece_A 321 PLVTDIDISLDDKFLYLSLWGIGEVRQYDISN 352 (462)
T ss_dssp CCCCCEEECTTSCEEEEEETTTTEEEEEECSS
T ss_pred CceeEEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 457889999999876554 4577999999863
No 267
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=39.78 E-value=37 Score=23.09 Aligned_cols=27 Identities=11% Similarity=0.067 Sum_probs=21.8
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEE
Q psy11104 15 TKVNCLAWHQNQGWIAVGGDDGLLKVLK 42 (70)
Q Consensus 15 ~~V~~va~spdg~~LasGg~Dg~IklWd 42 (70)
....+++|.|+|.++++ ..+|.|++++
T Consensus 29 ~~P~~ia~~pdG~l~V~-e~~g~I~~~d 55 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVT-ERPGRLVLIS 55 (354)
T ss_dssp SCEEEEEEEETTEEEEE-ETTTEEEEEC
T ss_pred CCCeEEEEcCCCeEEEE-eCCCEEEEEe
Confidence 45689999999987776 4559999887
No 268
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=38.32 E-value=71 Score=24.37 Aligned_cols=48 Identities=13% Similarity=0.264 Sum_probs=35.9
Q ss_pred eeeecCCCCCeEEEEE-c-CCCCEEEEEe------------------CCCcEEEEECCCCCeEEEEEe
Q psy11104 7 KKIAIPNNTKVNCLAW-H-QNQGWIAVGG------------------DDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 7 ~~I~~~~~~~V~~va~-s-pdg~~LasGg------------------~Dg~IklWdi~~~~~~~~~~~ 54 (70)
+.|+.|..+....+++ + |+++++.+++ .++.+.+.|.++.+....+.-
T Consensus 126 ~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~V 193 (595)
T 1fwx_A 126 AILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLV 193 (595)
T ss_dssp EEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEE
T ss_pred eEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEe
Confidence 3456677788999998 5 9999988875 345788999888776655554
No 269
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=36.60 E-value=97 Score=22.82 Aligned_cols=35 Identities=6% Similarity=-0.139 Sum_probs=25.3
Q ss_pred CCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEECCCC
Q psy11104 12 PNNTKVNCLAWHQNQG-WIAVGGDDGLLKVLKLDTV 46 (70)
Q Consensus 12 ~~~~~V~~va~spdg~-~LasGg~Dg~IklWdi~~~ 46 (70)
+.....+.|+|+|+|+ +.++=+....|+.++....
T Consensus 307 ~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~ 342 (496)
T 3kya_A 307 ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEI 342 (496)
T ss_dssp SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETT
T ss_pred CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCC
Confidence 3345568999999998 4565567788998776443
No 270
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=35.39 E-value=63 Score=24.02 Aligned_cols=29 Identities=28% Similarity=0.196 Sum_probs=23.5
Q ss_pred CCCEEEEEeCCCcEEEEECCCCCeEEEEE
Q psy11104 25 NQGWIAVGGDDGLLKVLKLDTVSLTIMII 53 (70)
Q Consensus 25 dg~~LasGg~Dg~IklWdi~~~~~~~~~~ 53 (70)
.+.++..|+.||.++.+|.+++++.-...
T Consensus 483 agg~vf~gt~dg~l~A~D~~tG~~lW~~~ 511 (599)
T 1w6s_A 483 AGDLVFYGTLDGYLKARDSDTGDLLWKFK 511 (599)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred cCCEEEEECCCCeEEEEECCCCCEEEEee
Confidence 45677779999999999999998766543
No 271
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=34.96 E-value=67 Score=22.48 Aligned_cols=28 Identities=7% Similarity=0.159 Sum_probs=22.1
Q ss_pred EEEEEcCCCC-EEEEEeCCCcEEEEECCC
Q psy11104 18 NCLAWHQNQG-WIAVGGDDGLLKVLKLDT 45 (70)
Q Consensus 18 ~~va~spdg~-~LasGg~Dg~IklWdi~~ 45 (70)
..++|+|+|+ +.++-...+.|+.+++..
T Consensus 276 ~~ia~dpdG~~LYvad~~~~~I~~~~~d~ 304 (433)
T 4hw6_A 276 FHIVWHPTGDWAYIIYNGKHCIYRVDYNR 304 (433)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEBCT
T ss_pred ccEEEeCCCCEEEEEeCCCCEEEEEeCCC
Confidence 4699999998 566667778999988753
No 272
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=34.00 E-value=86 Score=20.39 Aligned_cols=29 Identities=17% Similarity=0.359 Sum_probs=23.1
Q ss_pred CCEEEEEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 26 QGWIAVGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 26 g~~LasGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
+..|..++.+|.+..+|.++++..-....
T Consensus 318 ~~~l~v~~~~g~l~~~d~~tG~~~~~~~~ 346 (376)
T 3q7m_A 318 NGNLVVGDSEGYLHWINVEDGRFVAQQKV 346 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEEec
Confidence 46788889999999999999887655443
No 273
>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} SCOP: d.3.1.10
Probab=33.97 E-value=42 Score=22.29 Aligned_cols=43 Identities=14% Similarity=0.133 Sum_probs=31.5
Q ss_pred eecCCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEECCCCCeEEE
Q psy11104 9 IAIPNNTKVNCLAWHQNQ-GWIAVGGDDGLLKVLKLDTVSLTIM 51 (70)
Q Consensus 9 I~~~~~~~V~~va~spdg-~~LasGg~Dg~IklWdi~~~~~~~~ 51 (70)
|..+..+-+.++-|...+ -.|++..++|++.++|..-++-.+.
T Consensus 113 i~~~g~~hllsl~f~~g~aHaia~S~~g~~~tlFDPN~GEF~v~ 156 (188)
T 1ukf_A 113 VAQSGRKHLLSLRFANVQGHAIACSCEGSQFKLFDPNLGEFQSS 156 (188)
T ss_dssp HCSTTCEEEEEEEETTTEEEEEEEEEETTEEEEEETTTEEEEEE
T ss_pred HhhCCCceEEEEEecCCCceeEEeccCCCeEEEeCCCCceeecc
Confidence 444456667778887653 3588888999999999988876554
No 274
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=33.30 E-value=72 Score=23.69 Aligned_cols=33 Identities=12% Similarity=-0.015 Sum_probs=26.1
Q ss_pred EEcCCC---CEEEEEeCCCcEEEEECCCCCeEEEEE
Q psy11104 21 AWHQNQ---GWIAVGGDDGLLKVLKLDTVSLTIMII 53 (70)
Q Consensus 21 a~spdg---~~LasGg~Dg~IklWdi~~~~~~~~~~ 53 (70)
....+| ..++.++.+|.+.++|.++++..-...
T Consensus 319 ~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~ 354 (677)
T 1kb0_A 319 DIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKN 354 (677)
T ss_dssp EEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEE
T ss_pred ecccCCcEeeEEEEECCCCEEEEEECCCCCEecccc
Confidence 444467 679999999999999999998765543
No 275
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=31.43 E-value=62 Score=22.53 Aligned_cols=33 Identities=15% Similarity=0.023 Sum_probs=26.1
Q ss_pred CeEEEEEcC-CCCEEEEEeCCCcEEEEECCCCCe
Q psy11104 16 KVNCLAWHQ-NQGWIAVGGDDGLLKVLKLDTVSL 48 (70)
Q Consensus 16 ~V~~va~sp-dg~~LasGg~Dg~IklWdi~~~~~ 48 (70)
...+++++| +|.++++-..++.|..++..+...
T Consensus 227 ~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~ 260 (430)
T 3tc9_A 227 NCNGAETHPINGELYFNSWNAGQVFRYDFTTQET 260 (430)
T ss_dssp SCCCEEECTTTCCEEEEETTTTEEEEEETTTTEE
T ss_pred CceEEEEeCCCCEEEEEECCCCEEEEEECCCCcE
Confidence 457889999 688888877888999999876543
No 276
>1c8u_A Acyl-COA thioesterase II; internal repeats, hydrolase; HET: LDA; 1.90A {Escherichia coli} SCOP: d.38.1.3 d.38.1.3
Probab=30.76 E-value=37 Score=22.68 Aligned_cols=23 Identities=17% Similarity=0.261 Sum_probs=12.6
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEE
Q psy11104 17 VNCLAWHQNQGWIAVGGDDGLLK 39 (70)
Q Consensus 17 V~~va~spdg~~LasGg~Dg~Ik 39 (70)
+.+.=|+.+|+++|++...|.||
T Consensus 260 ~~g~i~d~~G~LVAs~~Qeglvr 282 (285)
T 1c8u_A 260 VRGEFYTQDGVLVASTVQEGVMR 282 (285)
T ss_dssp EEEEEEETTCCEEEEEEEEEEEE
T ss_pred EEEEEECCCCCEEEEEEEeEEEE
Confidence 34444555666666665555554
No 277
>3mwp_A Nucleoprotein; structural genomics, scottish structural PROT facility, SSPF, nuclear protein; 1.79A {Lassa virus josiah} PDB: 3mwt_A 3mx2_A* 3mx5_A* 3r3l_A 3t5q_A 3t5n_A
Probab=30.42 E-value=12 Score=28.56 Aligned_cols=18 Identities=28% Similarity=0.606 Sum_probs=12.1
Q ss_pred EEeCCCcEEEEECCCCCe
Q psy11104 31 VGGDDGLLKVLKLDTVSL 48 (70)
Q Consensus 31 sGg~Dg~IklWdi~~~~~ 48 (70)
.++.||-||+||++....
T Consensus 162 ~~~~~GVVrvWDVkd~sl 179 (577)
T 3mwp_A 162 RAGRDGVVRVWDVKNAEL 179 (577)
T ss_dssp ----CCEECSEECSCGGG
T ss_pred CCCCCCeEEEEecCCHHH
Confidence 678899999999987653
No 278
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=30.21 E-value=1.2e+02 Score=19.94 Aligned_cols=29 Identities=17% Similarity=0.284 Sum_probs=21.2
Q ss_pred eecCCCCCeEEEEEcCCCCEEEEEeCCCcE
Q psy11104 9 IAIPNNTKVNCLAWHQNQGWIAVGGDDGLL 38 (70)
Q Consensus 9 I~~~~~~~V~~va~spdg~~LasGg~Dg~I 38 (70)
+..+....+.+|+|.+++..+|. |.+|.|
T Consensus 30 ~~~~~~~~~~~v~~~~~~~~~~~-G~~g~i 58 (327)
T 2xbg_A 30 IQLPTTATILDMSFIDRHHGWLV-GVNATL 58 (327)
T ss_dssp EECSCSSCEEEEEESSSSCEEEE-ETTTEE
T ss_pred eecCCCCcEEEEEECCCCcEEEE-cCCCeE
Confidence 34455678999999887888884 567765
No 279
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=30.10 E-value=1.2e+02 Score=20.18 Aligned_cols=38 Identities=18% Similarity=0.079 Sum_probs=30.5
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 16 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 16 ~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
.++.++|. +|+..+....++.|.+-|.++++..-.+..
T Consensus 153 ~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~ 190 (266)
T 2iwa_A 153 RLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILL 190 (266)
T ss_dssp CEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEEC
T ss_pred cceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEEC
Confidence 46788888 888888877889999999999986655544
No 280
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=29.28 E-value=60 Score=23.37 Aligned_cols=28 Identities=11% Similarity=0.188 Sum_probs=21.9
Q ss_pred CeEEEEEcCCCC--EEEEEeCCCcEEEEECC
Q psy11104 16 KVNCLAWHQNQG--WIAVGGDDGLLKVLKLD 44 (70)
Q Consensus 16 ~V~~va~spdg~--~LasGg~Dg~IklWdi~ 44 (70)
.-+.++|.|||. ++++ ...|.|++++..
T Consensus 15 ~P~~~a~~pdG~~rl~V~-er~G~i~~~~~~ 44 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFIL-EKEGYVKILTPE 44 (463)
T ss_dssp SEEEEECCSSSSCCEEEE-ETTTEEEEECTT
T ss_pred CceEEEECCCCCeEEEEE-eCCceEEEEeCC
Confidence 457999999985 6665 678999999754
No 281
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=28.30 E-value=1.6e+02 Score=21.80 Aligned_cols=28 Identities=14% Similarity=0.122 Sum_probs=23.1
Q ss_pred CCCC---EEEEEeCCCcEEEEECCCCCeEEE
Q psy11104 24 QNQG---WIAVGGDDGLLKVLKLDTVSLTIM 51 (70)
Q Consensus 24 pdg~---~LasGg~Dg~IklWdi~~~~~~~~ 51 (70)
.+|+ .++.++.||.++++|.++++...+
T Consensus 314 ~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~ 344 (689)
T 1yiq_A 314 IDGKPRKVLMQAPKNGFFYVIDRATGELLSA 344 (689)
T ss_dssp ETTEEEEEEEECCTTSEEEEEETTTCCEEEE
T ss_pred cCCcEEEEEEEECCCCeEEEEECCCCCEecc
Confidence 3565 788999999999999999987644
No 282
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=24.59 E-value=2.1e+02 Score=21.05 Aligned_cols=34 Identities=12% Similarity=0.293 Sum_probs=24.8
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEECCCCC
Q psy11104 14 NTKVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 14 ~~~V~~va~spdg~~LasGg~Dg~IklWdi~~~~ 47 (70)
...|.++...++|++|-.|+.++-+..+|.++++
T Consensus 405 ~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~ 438 (795)
T 4a2l_A 405 SNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQ 438 (795)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTEEEEEETTTCC
T ss_pred CccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCc
Confidence 3568999999999844445666668888877654
No 283
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=23.95 E-value=1.6e+02 Score=19.90 Aligned_cols=38 Identities=21% Similarity=0.180 Sum_probs=29.9
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 16 KVNCLAWHQNQGWIAVGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 16 ~V~~va~spdg~~LasGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
.++.++|. +|++.|..-.++.|.+-|.++++..-.+..
T Consensus 173 ~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~ 210 (262)
T 3nol_A 173 ELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDL 210 (262)
T ss_dssp CEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEEC
T ss_pred ccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEEC
Confidence 35667886 788888887889999999999987666554
No 284
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=23.19 E-value=1.8e+02 Score=19.68 Aligned_cols=33 Identities=9% Similarity=-0.013 Sum_probs=25.3
Q ss_pred CCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCC
Q psy11104 15 TKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 15 ~~V~~va~spd-g~~LasGg~Dg~IklWdi~~~~ 47 (70)
....+++|++. +.++.+-...+.|..++..+..
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~ 149 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSN 149 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCC
T ss_pred CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCC
Confidence 45778999976 5566676778899999987665
No 285
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=22.69 E-value=1.6e+02 Score=21.43 Aligned_cols=31 Identities=13% Similarity=0.120 Sum_probs=24.3
Q ss_pred CCCC---EEEEEeCCCcEEEEECCCCCeEEEEEe
Q psy11104 24 QNQG---WIAVGGDDGLLKVLKLDTVSLTIMIIL 54 (70)
Q Consensus 24 pdg~---~LasGg~Dg~IklWdi~~~~~~~~~~~ 54 (70)
.+|+ .++.++.||.+.++|.++++..-....
T Consensus 331 ~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~ 364 (582)
T 1flg_A 331 KDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPF 364 (582)
T ss_dssp SSSCEEEEEEEECTTSEEEEEETTTCCEEEEEES
T ss_pred CCCCEEEEEEEECCCceEEEEECCCCCEeccccc
Confidence 4564 788899999999999999887655443
No 286
>1s28_A ORF1; type III chaperone; 3.00A {Pseudomonas syringae PV} SCOP: d.198.1.1
Probab=22.17 E-value=1.3e+02 Score=18.87 Aligned_cols=29 Identities=10% Similarity=0.150 Sum_probs=23.0
Q ss_pred CCCCCeEEEEEcCCCCEEEEEeCCCcEEEE
Q psy11104 12 PNNTKVNCLAWHQNQGWIAVGGDDGLLKVL 41 (70)
Q Consensus 12 ~~~~~V~~va~spdg~~LasGg~Dg~IklW 41 (70)
.|...|+|..|. +-..=+-|++.|.|.+-
T Consensus 27 khe~eVYcf~F~-~i~i~iy~d~~rwvyf~ 55 (132)
T 1s28_A 27 KHEHEVYCFEFK-EVSIRIYQDKFKWVYFL 55 (132)
T ss_dssp CSTTCCEEEEEG-GGTEEEEECTTSEEEEE
T ss_pred cccCceEEEEEC-CEEEEEeecCCcEEEEE
Confidence 478899999999 75666667888888773
No 287
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=21.75 E-value=1.1e+02 Score=22.35 Aligned_cols=28 Identities=14% Similarity=0.355 Sum_probs=24.1
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCcEEE
Q psy11104 13 NNTKVNCLAWHQNQGWIAVGGDDGLLKV 40 (70)
Q Consensus 13 ~~~~V~~va~spdg~~LasGg~Dg~Ikl 40 (70)
...+|..+.++++.++|..+++++-++|
T Consensus 460 ~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 460 EPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp SCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred CCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 4678999999999999999999887766
No 288
>3cjy_A Putative thioesterase; YP_496845.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE PGE; 1.70A {Novosphingobium aromaticivorans}
Probab=21.21 E-value=24 Score=23.30 Aligned_cols=24 Identities=29% Similarity=0.451 Sum_probs=17.8
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEE
Q psy11104 16 KVNCLAWHQNQGWIAVGGDDGLLK 39 (70)
Q Consensus 16 ~V~~va~spdg~~LasGg~Dg~Ik 39 (70)
...+.=|+.+|+++|++...+.|+
T Consensus 235 ~~~~~i~d~~G~lvAs~~Q~~lvr 258 (259)
T 3cjy_A 235 QGQVTLWDQSGRLLATGAQSLLLK 258 (259)
T ss_dssp EEEEEEECTTSCEEEEEEEEEECC
T ss_pred EEEEEEECCCCCEEEEEEEEEEEe
Confidence 344566999999999988776553
No 289
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=20.81 E-value=1.9e+02 Score=19.19 Aligned_cols=33 Identities=9% Similarity=-0.013 Sum_probs=24.8
Q ss_pred CCeEEEEEcCC-CCEEEEEeCCCcEEEEECCCCC
Q psy11104 15 TKVNCLAWHQN-QGWIAVGGDDGLLKVLKLDTVS 47 (70)
Q Consensus 15 ~~V~~va~spd-g~~LasGg~Dg~IklWdi~~~~ 47 (70)
..+.+++|++. +.++.+-...+.|..++..+..
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~ 106 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSN 106 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CceEEEEEeccccEEEEEeccCCceEEEecCCCC
Confidence 34688999976 5566666778899999887654
Done!