BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11107
(321 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 204 bits (520), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 125/364 (34%), Positives = 193/364 (53%), Gaps = 46/364 (12%)
Query: 3 GGYCALDIGDTLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNE 62
GGY + IGD Y +IRKLGWG STVWLCW+++ +VA+KV+K A + +E
Sbjct: 18 GGYHPVKIGDLFNGRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYTETALDE 77
Query: 63 VQLLKITISNHHEYQNH--VVKFLDHFTVLGDNGVHACIVFELAGQTLSEF--KSINY-- 116
++LLK + N VV+ +D F + G NG+H C+VFE+ G L ++ KS NY
Sbjct: 78 IKLLKCVRESDPSDPNKDMVVQLIDDFKISGMNGIHVCMVFEVLGHHLLKWIIKS-NYQG 136
Query: 117 LNMNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYE------ 170
L + C+K I RQ+L+GL YLH C ++HTD+K +NIL+ + +++A E E
Sbjct: 137 LPVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVRRMAAEATEWQKAGA 196
Query: 171 -------------------VLNTTN-------IADLGYAYKNNAFEFDYIQAREFRAAEV 204
L+ N IADLG A + + IQ R++R+ EV
Sbjct: 197 PPPSGSAVSTAPAADLLVNPLDPRNADKIRVKIADLGNACWVHKHFTEDIQTRQYRSIEV 256
Query: 205 VLGGKLGKPVDIWSTACITYQMVTGEYLFDPN-----LNDFQHIERMTEILGDIPDKVCN 259
++G P DIWSTAC+ +++ TG+YLF+P+ D HI + E+LG IP
Sbjct: 257 LIGAGYSTPADIWSTACMAFELATGDYLFEPHSGEDYSRDEDHIAHIIELLGSIPRHFAL 316
Query: 260 QSRLKAEFYDEDGKLLS-NNVEQISLTHHLQER-GFSKSESLTFSDLILSMLHWDSDERF 317
+ EF++ G+L ++ SL L E+ G+ ++ F+D ++ ML ++R
Sbjct: 317 SGKYSREFFNRRGELRHITKLKPWSLFDVLVEKYGWPHEDAAQFTDFLIPMLEMVPEKRA 376
Query: 318 TAAQ 321
+A +
Sbjct: 377 SAGE 380
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 201 bits (510), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 132/367 (35%), Positives = 196/367 (53%), Gaps = 50/367 (13%)
Query: 3 GGYCALDIGDTLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNE 62
GGY + IGD Y +IRKLGWG STVWL W+I+ +VA+KV+K A + +E
Sbjct: 8 GGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDE 67
Query: 63 VQLLKITISNHHEYQNH--VVKFLDHFTVLGDNGVHACIVFELAGQTLSEF--KSINY-- 116
++LLK ++ N VV+ LD F + G NG H C+VFE+ G L ++ KS NY
Sbjct: 68 IRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKS-NYQG 126
Query: 117 LNMNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYE------ 170
L + C+K I +Q+L+GL YLH C ++HTD+K +NIL+ +E ++LA E E
Sbjct: 127 LPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGA 186
Query: 171 ---------------------VLNTTN-------IADLGYA-YKNNAFEFDYIQAREFRA 201
L N IADLG A + + F D IQ R++R+
Sbjct: 187 PPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTED-IQTRQYRS 245
Query: 202 AEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPN-----LNDFQHIERMTEILGDIPDK 256
EV++G P DIWSTAC+ +++ TG+YLF+P+ D HI + E+LG +P K
Sbjct: 246 LEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRK 305
Query: 257 VCNQSRLKAEFYDEDGKLLS-NNVEQISLTHHLQER-GFSKSESLTFSDLILSMLHWDSD 314
+ + EF+ + G L ++ L L E+ +S+ E+ F+D +L ML +
Sbjct: 306 LIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPE 365
Query: 315 ERFTAAQ 321
+R TAA+
Sbjct: 366 KRATAAE 372
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 201 bits (510), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 132/367 (35%), Positives = 196/367 (53%), Gaps = 50/367 (13%)
Query: 3 GGYCALDIGDTLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNE 62
GGY + IGD Y +IRKLGWG STVWL W+I+ +VA+KV+K A + +E
Sbjct: 24 GGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDE 83
Query: 63 VQLLKITISNHHEYQNH--VVKFLDHFTVLGDNGVHACIVFELAGQTLSEF--KSINY-- 116
++LLK ++ N VV+ LD F + G NG H C+VFE+ G L ++ KS NY
Sbjct: 84 IRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKS-NYQG 142
Query: 117 LNMNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYE------ 170
L + C+K I +Q+L+GL YLH C ++HTD+K +NIL+ +E ++LA E E
Sbjct: 143 LPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGA 202
Query: 171 ---------------------VLNTTN-------IADLGYA-YKNNAFEFDYIQAREFRA 201
L N IADLG A + + F D IQ R++R+
Sbjct: 203 PPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTED-IQTRQYRS 261
Query: 202 AEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPN-----LNDFQHIERMTEILGDIPDK 256
EV++G P DIWSTAC+ +++ TG+YLF+P+ D HI + E+LG +P K
Sbjct: 262 LEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRK 321
Query: 257 VCNQSRLKAEFYDEDGKLLS-NNVEQISLTHHLQER-GFSKSESLTFSDLILSMLHWDSD 314
+ + EF+ + G L ++ L L E+ +S+ E+ F+D +L ML +
Sbjct: 322 LIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPE 381
Query: 315 ERFTAAQ 321
+R TAA+
Sbjct: 382 KRATAAE 388
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 178 bits (451), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 112/336 (33%), Positives = 182/336 (54%), Gaps = 29/336 (8%)
Query: 3 GGYCALDIGDTLI-STYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRN 61
GGY G+ + Y ++RKLGWG STVWL ++ +++VA+K+++G + +
Sbjct: 5 GGYHPAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAED 64
Query: 62 EVQLLKITISNHHEYQ-----NHVVKFLDHFTVLGDNGVHACIVFELAGQTL-SEFKSIN 115
E++LL+ + + NH++K LDHF G NGVH +VFE+ G+ L + K
Sbjct: 65 EIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYE 124
Query: 116 YLNMNCM--KDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLN 173
+ + + K IS+Q+L GL Y+H C ++HTD+K +N+L+ ++ E L
Sbjct: 125 HRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSP---------ENLI 175
Query: 174 TTNIADLGYAYKNNAFEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLF 233
IADLG A + + IQ RE+R+ EV+LG G DIWSTAC+ ++++TG++LF
Sbjct: 176 QIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLF 235
Query: 234 DPN-----LNDFQHIERMTEILGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQI---SLT 285
+P+ D HI ++ E+LG++P + + F++ G L N+ ++ L
Sbjct: 236 EPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRG--LLRNISKLKFWPLE 293
Query: 286 HHLQER-GFSKSESLTFSDLILSMLHWDSDERFTAA 320
L E+ FSK E+ SD + ML D +R A
Sbjct: 294 DVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAG 329
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 177 bits (450), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 108/322 (33%), Positives = 177/322 (54%), Gaps = 28/322 (8%)
Query: 16 STYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHE 75
+ Y ++RKLGWG STVWL ++ +++VA+K+++G + +E++LL+ +
Sbjct: 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNT 78
Query: 76 YQ-----NHVVKFLDHFTVLGDNGVHACIVFELAGQTL-SEFKSINYLNMNCM--KDISR 127
+ NH++K LDHF G NGVH +VFE+ G+ L + K + + + K IS+
Sbjct: 79 KEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISK 138
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNN 187
Q+L GL Y+H C ++HTD+K +N+L+ ++ E L IADLG A +
Sbjct: 139 QLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSP---------ENLIQIKIADLGNACWYD 189
Query: 188 AFEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPN-----LNDFQH 242
+ IQ RE+R+ EV+LG G DIWSTAC+ ++++TG++LF+P+ D H
Sbjct: 190 EHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDH 249
Query: 243 IERMTEILGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQI---SLTHHLQER-GFSKSES 298
I ++ E+LG++P + + F++ G L N+ ++ L L E+ FSK E+
Sbjct: 250 IAQIIELLGELPSYLLRNGKYTRTFFNSRG--LLRNISKLKFWPLEDVLTEKYKFSKDEA 307
Query: 299 LTFSDLILSMLHWDSDERFTAA 320
SD + ML D +R A
Sbjct: 308 KEISDFLSPMLQLDPRKRADAG 329
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/335 (30%), Positives = 158/335 (47%), Gaps = 28/335 (8%)
Query: 4 GYCALDIGDTLISTYFIIRKLGWGFSSTVWLCWN-IETSSYVAVKVMKGAPKFLHITRNE 62
G+ IGD L Y I+ LG G V C + S VA+K+++ K+ R E
Sbjct: 7 GHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLE 66
Query: 63 VQLLKITISNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLN---M 119
+ +LK E + V D F G H CI FEL G+ EF N +
Sbjct: 67 INVLKKIKEKDKENKFLCVLMSDWFNFHG----HMCIAFELLGKNTFEFLKENNFQPYPL 122
Query: 120 NCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSE--TL-GQKLALEVYEVLNTT- 175
++ ++ Q+ L +LHE L HTDLK +NIL + SE TL + + E V NT+
Sbjct: 123 PHVRHMAYQLCHALRFLHEN-QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSI 181
Query: 176 NIADLGYAYKNNAFEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDP 235
+AD G A ++ + R +R EV+L +P D+WS CI ++ G LF
Sbjct: 182 RVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQT 241
Query: 236 NLNDFQHIERMTEILGDIPDKVCNQSRLKAEFY------DE---DGKLLSNNVEQISLTH 286
+ N +H+ M +ILG IP + +++R + FY DE DG+ + N + + ++
Sbjct: 242 HENR-EHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLK-SY 299
Query: 287 HLQERGFSKSESLTFSDLILSMLHWDSDERFTAAQ 321
LQ+ E + DL+ ML +D +R T A+
Sbjct: 300 MLQD----SLEHVQLFDLMRRMLEFDPAQRITLAE 330
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/335 (30%), Positives = 158/335 (47%), Gaps = 28/335 (8%)
Query: 4 GYCALDIGDTLISTYFIIRKLGWGFSSTVWLCWN-IETSSYVAVKVMKGAPKFLHITRNE 62
G+ IGD L Y I+ LG G V C + S VA+K+++ K+ R E
Sbjct: 39 GHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLE 98
Query: 63 VQLLKITISNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLN---M 119
+ +LK E + V D F G H CI FEL G+ EF N +
Sbjct: 99 INVLKKIKEKDKENKFLCVLMSDWFNFHG----HMCIAFELLGKNTFEFLKENNFQPYPL 154
Query: 120 NCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSE--TL-GQKLALEVYEVLNTT- 175
++ ++ Q+ L +LHE L HTDLK +NIL + SE TL + + E V NT+
Sbjct: 155 PHVRHMAYQLCHALRFLHEN-QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSI 213
Query: 176 NIADLGYAYKNNAFEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDP 235
+AD G A ++ + R +R EV+L +P D+WS CI ++ G LF
Sbjct: 214 RVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQT 273
Query: 236 NLNDFQHIERMTEILGDIPDKVCNQSRLKAEFY------DE---DGKLLSNNVEQISLTH 286
+ N +H+ M +ILG IP + +++R + FY DE DG+ + N + + ++
Sbjct: 274 HENR-EHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLK-SY 331
Query: 287 HLQERGFSKSESLTFSDLILSMLHWDSDERFTAAQ 321
LQ+ E + DL+ ML +D +R T A+
Sbjct: 332 MLQD----SLEHVQLFDLMRRMLEFDPAQRITLAE 362
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/335 (30%), Positives = 158/335 (47%), Gaps = 28/335 (8%)
Query: 4 GYCALDIGDTLISTYFIIRKLGWGFSSTVWLCWN-IETSSYVAVKVMKGAPKFLHITRNE 62
G+ IGD L Y I+ LG G V C + S VA+K+++ K+ R E
Sbjct: 16 GHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLE 75
Query: 63 VQLLKITISNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLN---M 119
+ +LK E + V D F G H CI FEL G+ EF N +
Sbjct: 76 INVLKKIKEKDKENKFLCVLMSDWFNFHG----HMCIAFELLGKNTFEFLKENNFQPYPL 131
Query: 120 NCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSE--TL-GQKLALEVYEVLNTT- 175
++ ++ Q+ L +LHE L HTDLK +NIL + SE TL + + E V NT+
Sbjct: 132 PHVRHMAYQLCHALRFLHEN-QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSI 190
Query: 176 NIADLGYAYKNNAFEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDP 235
+AD G A ++ + R +R EV+L +P D+WS CI ++ G LF
Sbjct: 191 RVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQT 250
Query: 236 NLNDFQHIERMTEILGDIPDKVCNQSRLKAEFY------DE---DGKLLSNNVEQISLTH 286
+ N +H+ M +ILG IP + +++R + FY DE DG+ + N + + ++
Sbjct: 251 HENR-EHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLK-SY 308
Query: 287 HLQERGFSKSESLTFSDLILSMLHWDSDERFTAAQ 321
LQ+ E + DL+ ML +D +R T A+
Sbjct: 309 MLQD----SLEHVQLFDLMRRMLEFDPAQRITLAE 339
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 157/335 (46%), Gaps = 28/335 (8%)
Query: 4 GYCALDIGDTLISTYFIIRKLGWG-FSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNE 62
G+ +GD L Y I+ LG G F V + + VA+K++K K+ R E
Sbjct: 21 GHLIYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAARLE 80
Query: 63 VQLLKITISNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEF-KSINYLN--M 119
+ +L+ + +N V+ D F G H CI FEL G + +F K NYL +
Sbjct: 81 INVLEKINEKDPDNKNLCVQMFDWFDYHG----HMCISFELLGLSTFDFLKDNNYLPYPI 136
Query: 120 NCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSE---TLGQKLALEVYEVLNTT- 175
+ ++ ++ Q+ + + +LH+ L HTDLK +NIL + S+ T + + V +T
Sbjct: 137 HQVRHMAFQLCQAVKFLHD-NKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAV 195
Query: 176 NIADLGYAYKNNAFEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDP 235
+ D G A ++ + R +RA EV+L +P D+WS CI ++ G LF
Sbjct: 196 RVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQT 255
Query: 236 NLNDFQHIERMTEILGDIPDKVCNQSRLKAEFY------DED---GKLLSNNVEQISLTH 286
+ N +H+ M ILG IP ++ ++R + FY DE+ G+ + N + L
Sbjct: 256 HDNR-EHLAMMERILGPIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCK--PLRR 312
Query: 287 HLQERGFSKSESLTFSDLILSMLHWDSDERFTAAQ 321
+L E DLI SML ++ +R T +
Sbjct: 313 YLTSEA---EEHHQLFDLIESMLEYEPAKRLTLGE 344
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 151/326 (46%), Gaps = 30/326 (9%)
Query: 11 GDTLISTYFIIRKLGWGFSSTVWLCWNIETSS-YVAVKVMKGAPKFLHITRNEVQLLKIT 69
GD L + Y I+ LG G V C + + +VAVK++K ++ R+E+Q+L+
Sbjct: 9 GDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHL 68
Query: 70 ISNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSIN---YLNMNCMKDIS 126
+ V+ L+ F G H CIVFEL G + +F N ++ ++ ++
Sbjct: 69 NTTDPNSTFRCVQMLEWFEHHG----HICIVFELLGLSTYDFIKENGFLPFRLDHIRKMA 124
Query: 127 RQILKGLYYLHEVCDLVHTDLKHDNILVLTS---ETLGQKLALEVYEVLNT-TNIADLGY 182
QI K + +LH L HTDLK +NIL + S E K+ + ++N + D G
Sbjct: 125 YQICKSVNFLHSN-KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGS 183
Query: 183 AYKNNAFEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQH 242
A ++ + R +RA EV+L +P D+WS CI + G +F P + +H
Sbjct: 184 ATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVF-PTHDSKEH 242
Query: 243 IERMTEILGDIPDKVCNQSRLKAEF------YDED---GKLLSNNVEQISLTHHLQERGF 293
+ M ILG +P + ++R + F +DE G+ +S + L+E
Sbjct: 243 LAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKP------LKEFML 296
Query: 294 SKS-ESLTFSDLILSMLHWDSDERFT 318
S+ E DLI ML +D +R T
Sbjct: 297 SQDVEHERLFDLIQKMLEYDPAKRIT 322
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 151/326 (46%), Gaps = 30/326 (9%)
Query: 11 GDTLISTYFIIRKLGWGFSSTVWLCWNIETSS-YVAVKVMKGAPKFLHITRNEVQLLKIT 69
GD L + Y I+ LG G V C + + +VAVK++K ++ R+E+Q+L+
Sbjct: 9 GDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHL 68
Query: 70 ISNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSIN---YLNMNCMKDIS 126
+ V+ L+ F G H CIVFEL G + +F N ++ ++ ++
Sbjct: 69 NTTDPNSTFRCVQMLEWFEHHG----HICIVFELLGLSTYDFIKENGFLPFRLDHIRKMA 124
Query: 127 RQILKGLYYLHEVCDLVHTDLKHDNILVLTS---ETLGQKLALEVYEVLNT-TNIADLGY 182
QI K + +LH L HTDLK +NIL + S E K+ + ++N + D G
Sbjct: 125 YQICKSVNFLHSN-KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGS 183
Query: 183 AYKNNAFEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQH 242
A ++ + R +RA EV+L +P D+WS CI + G +F P + +H
Sbjct: 184 ATYDDEHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVF-PTHDSKEH 242
Query: 243 IERMTEILGDIPDKVCNQSRLKAEF------YDED---GKLLSNNVEQISLTHHLQERGF 293
+ M ILG +P + ++R + F +DE G+ +S + L+E
Sbjct: 243 LAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKP------LKEFML 296
Query: 294 SKS-ESLTFSDLILSMLHWDSDERFT 318
S+ E DLI ML +D +R T
Sbjct: 297 SQDVEHERLFDLIQKMLEYDPAKRIT 322
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 149/337 (44%), Gaps = 46/337 (13%)
Query: 11 GDTLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITI 70
G+ + Y I +G G V ++ +VA+K++K FL+ + EV+LL++
Sbjct: 49 GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMN 108
Query: 71 SNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEF-KSINY--LNMNCMKDISR 127
+ E + ++V HF H C+VFE+ L + ++ N+ +++N + ++
Sbjct: 109 KHDTEMKYYIVHLKRHFMFRN----HLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQ 164
Query: 128 QILKGLYYLHEV-CDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKN 186
Q+ L +L ++H DLK +NIL+ + K I D G + +
Sbjct: 165 QMCTALLFLATPELSIIHCDLKPENILLCNPKRXAIK-------------IVDFGSSCQL 211
Query: 187 NAFEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERM 246
+ IQ+R +R+ EV+LG +D+WS CI +M TGE LF N+ + ++
Sbjct: 212 GQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFS-GANEVDQMNKI 270
Query: 247 TEILGDIPDKVCNQSRLKAEFYDE------------DGKLLSNNVEQISLTHHLQ----- 289
E+LG P + +Q+ +F+++ DGK L + L
Sbjct: 271 VEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGG 330
Query: 290 -------ERGFSKSESLTFSDLILSMLHWDSDERFTA 319
E G + ++ L F DLIL ML +D R
Sbjct: 331 PGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQP 367
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 149/337 (44%), Gaps = 46/337 (13%)
Query: 11 GDTLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITI 70
G+ + Y I +G G V ++ +VA+K++K FL+ + EV+LL++
Sbjct: 49 GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMN 108
Query: 71 SNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEF-KSINY--LNMNCMKDISR 127
+ E + ++V HF H C+VFE+ L + ++ N+ +++N + ++
Sbjct: 109 KHDTEMKYYIVHLKRHFMFRN----HLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQ 164
Query: 128 QILKGLYYLHEV-CDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKN 186
Q+ L +L ++H DLK +NIL+ + + I D G + +
Sbjct: 165 QMCTALLFLATPELSIIHCDLKPENILLCNPKR-------------SAIKIVDFGSSCQL 211
Query: 187 NAFEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERM 246
+ IQ+R +R+ EV+LG +D+WS CI +M TGE LF N+ + ++
Sbjct: 212 GQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFS-GANEVDQMNKI 270
Query: 247 TEILGDIPDKVCNQSRLKAEFYDE------------DGKLLSNNVEQISLTHHLQ----- 289
E+LG P + +Q+ +F+++ DGK L + L
Sbjct: 271 VEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGG 330
Query: 290 -------ERGFSKSESLTFSDLILSMLHWDSDERFTA 319
E G + ++ L F DLIL ML +D R
Sbjct: 331 PGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQP 367
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 149/334 (44%), Gaps = 46/334 (13%)
Query: 11 GDTLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITI 70
G+ + Y I +G G V ++ +VA+K++K FL+ + EV+LL++
Sbjct: 30 GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMN 89
Query: 71 SNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEF-KSINY--LNMNCMKDISR 127
+ E + ++V HF H C+VFE+ L + ++ N+ +++N + ++
Sbjct: 90 KHDTEMKYYIVHLKRHFMFRN----HLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQ 145
Query: 128 QILKGLYYLHEV-CDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKN 186
Q+ L +L ++H DLK +NIL+ + + I D G + +
Sbjct: 146 QMCTALLFLATPELSIIHCDLKPENILLCNPKR-------------SAIKIVDFGSSCQL 192
Query: 187 NAFEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERM 246
+ IQ+R +R+ EV+LG +D+WS CI +M TGE LF N+ + ++
Sbjct: 193 GQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFS-GANEVDQMNKI 251
Query: 247 TEILGDIPDKVCNQSRLKAEFYDE------------DGKLLSNNVEQISLTHHLQ----- 289
E+LG P + +Q+ +F+++ DGK L + L
Sbjct: 252 VEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGG 311
Query: 290 -------ERGFSKSESLTFSDLILSMLHWDSDER 316
E G + ++ L F DLIL ML +D R
Sbjct: 312 PGGRRAGESGHTVADYLKFKDLILRMLDYDPKTR 345
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 154/330 (46%), Gaps = 26/330 (7%)
Query: 11 GDTLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITI 70
G L + + +IRK+G G V LC +I+ Y AVKV++ K+ + E +LK I
Sbjct: 30 GMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILK-KI 88
Query: 71 SNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISR--- 127
N N++VK+ F H C++FE G +L E + N N ++DI
Sbjct: 89 QNDDINNNNIVKYHGKFMYYD----HMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCI 144
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNIL---------VLTSETLGQKLALEVYEVLNT-TNI 177
+ILK L YL ++ L HTDLK +NIL ++T + +++Y +T +
Sbjct: 145 EILKALNYLRKM-SLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKL 203
Query: 178 ADLGYAYKNNAFEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNL 237
D G A + + I R++RA EV+L D+WS C+ ++ TG LF +
Sbjct: 204 IDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTH- 262
Query: 238 NDFQHIERMTEILGDIPDKVCNQSRLK--AEFYDEDGKLLS--NNVEQISLTHHLQE--R 291
+H+ M I+ IP + ++ +++ ++D L+ N I+ H+++
Sbjct: 263 EHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLP 322
Query: 292 GFSKSESLTFSDLILSMLHWDSDERFTAAQ 321
+ + F D + S+L D R + A+
Sbjct: 323 LYKIIKHELFCDFLYSILQIDPTLRPSPAE 352
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 139/332 (41%), Gaps = 41/332 (12%)
Query: 12 DTLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITIS 71
D + Y +++ +G G V ++ + +VA+K+++ +F E+++L+
Sbjct: 93 DHVAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRK 152
Query: 72 NHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYL---NMNCMKDISRQ 128
+ +V+ L++FT H C+ FEL L E N ++ ++ +
Sbjct: 153 QDKDNTMNVIHMLENFTFRN----HICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHS 208
Query: 129 ILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNA 188
IL+ L LH+ ++H DLK +NIL+ G K + D G + +
Sbjct: 209 ILQCLDALHK-NRIIHCDLKPENILLKQQGRSGIK-------------VIDFGSSCYEHQ 254
Query: 189 FEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTE 248
+ IQ+R +RA EV+LG + G P+D+WS CI +++TG Y P ++ + M E
Sbjct: 255 RVYXXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG-YPLLPGEDEGDQLACMIE 313
Query: 249 ILGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLT-------- 300
+LG K+ + S+ F G V +S + G S+ L
Sbjct: 314 LLGMPXQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREW 373
Query: 301 -----------FSDLILSMLHWDSDERFTAAQ 321
F D + L WD R T Q
Sbjct: 374 GNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQ 405
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 139/332 (41%), Gaps = 41/332 (12%)
Query: 12 DTLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITIS 71
D + Y +++ +G G V ++ + +VA+K+++ +F E+++L+
Sbjct: 93 DHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRK 152
Query: 72 NHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYL---NMNCMKDISRQ 128
+ +V+ L++FT H C+ FEL L E N ++ ++ +
Sbjct: 153 QDKDNTMNVIHMLENFTFRN----HICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHS 208
Query: 129 ILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNA 188
IL+ L LH+ ++H DLK +NIL+ G K + D G + +
Sbjct: 209 ILQCLDALHK-NRIIHCDLKPENILLKQQGRSGIK-------------VIDFGSSCYEHQ 254
Query: 189 FEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTE 248
+ IQ+R +RA EV+LG + G P+D+WS CI +++TG Y P ++ + M E
Sbjct: 255 RVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG-YPLLPGEDEGDQLACMIE 313
Query: 249 ILGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLT-------- 300
+LG K+ + S+ F G V +S + G S+ L
Sbjct: 314 LLGMPSQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREW 373
Query: 301 -----------FSDLILSMLHWDSDERFTAAQ 321
F D + L WD R T Q
Sbjct: 374 GNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQ 405
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 139/332 (41%), Gaps = 41/332 (12%)
Query: 12 DTLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITIS 71
D + Y +++ +G G V ++ + +VA+K+++ +F E+++L+
Sbjct: 93 DHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRK 152
Query: 72 NHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYL---NMNCMKDISRQ 128
+ +V+ L++FT H C+ FEL L E N ++ ++ +
Sbjct: 153 QDKDNTMNVIHMLENFTFRN----HICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHS 208
Query: 129 ILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNA 188
IL+ L LH+ ++H DLK +NIL+ G K + D G + +
Sbjct: 209 ILQCLDALHK-NRIIHCDLKPENILLKQQGRSGIK-------------VIDFGSSCYEHQ 254
Query: 189 FEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTE 248
+ IQ+R +RA EV+LG + G P+D+WS CI +++TG Y P ++ + M E
Sbjct: 255 RVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG-YPLLPGEDEGDQLACMIE 313
Query: 249 ILGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLT-------- 300
+LG K+ + S+ F G V +S + G S+ L
Sbjct: 314 LLGMPSQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREW 373
Query: 301 -----------FSDLILSMLHWDSDERFTAAQ 321
F D + L WD R T Q
Sbjct: 374 GNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQ 405
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 136/315 (43%), Gaps = 46/315 (14%)
Query: 16 STYFIIRKLGWGFSSTVWLCWNIETSSYVA---VKVMKGAPKFLHITRNEVQLLKITISN 72
S Y + ++G G TV+ + + +VA V+V G T EV LL+ +
Sbjct: 4 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAF 63
Query: 73 HHEYQNHVVKFLDH-FTVLGDNGVHACIVFELAGQTLSEF---KSINYLNMNCMKDISRQ 128
H +VV+ +D T D + +VFE Q L + L +KD+ RQ
Sbjct: 64 EHP---NVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 129 ILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA--YKN 186
L+GL +LH C +VH DLK +NILV + T +AD G A Y
Sbjct: 121 FLRGLDFLHANC-IVHRDLKPENILVTSG---------------GTVKLADFGLARIYSY 164
Query: 187 NAFEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERM 246
F + +RA EV+L PVD+WS CI +M + LF N ++ + ++
Sbjct: 165 QMALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGN-SEADQLGKI 223
Query: 247 TEILGDIP--DKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDL 304
+++G P D + S + F + + + V + ++E G + L
Sbjct: 224 FDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPE------MEESG---------AQL 268
Query: 305 ILSMLHWDSDERFTA 319
+L ML ++ +R +A
Sbjct: 269 LLEMLTFNPHKRISA 283
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 135/315 (42%), Gaps = 46/315 (14%)
Query: 16 STYFIIRKLGWGFSSTVWLCWNIETSSYVA---VKVMKGAPKFLHITRNEVQLLKITISN 72
S Y + ++G G TV+ + + +VA V+V G T EV LL+ +
Sbjct: 4 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAF 63
Query: 73 HHEYQNHVVKFLDH-FTVLGDNGVHACIVFELAGQTLSEF---KSINYLNMNCMKDISRQ 128
H +VV+ +D T D + +VFE Q L + L +KD+ RQ
Sbjct: 64 EHP---NVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 129 ILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA--YKN 186
L+GL +LH C +VH DLK +NILV + T +AD G A Y
Sbjct: 121 FLRGLDFLHANC-IVHRDLKPENILVTSG---------------GTVKLADFGLARIYSY 164
Query: 187 NAFEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERM 246
+ +RA EV+L PVD+WS CI +M + LF N ++ + ++
Sbjct: 165 QMALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGN-SEADQLGKI 223
Query: 247 TEILGDIP--DKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDL 304
+++G P D + S + F + + + V + ++E G + L
Sbjct: 224 FDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPE------MEESG---------AQL 268
Query: 305 ILSMLHWDSDERFTA 319
+L ML ++ +R +A
Sbjct: 269 LLEMLTFNPHKRISA 283
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 135/315 (42%), Gaps = 46/315 (14%)
Query: 16 STYFIIRKLGWGFSSTVWLCWNIETSSYVA---VKVMKGAPKFLHITRNEVQLLKITISN 72
S Y + ++G G TV+ + + +VA V+V G T EV LL+ +
Sbjct: 4 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAF 63
Query: 73 HHEYQNHVVKFLDH-FTVLGDNGVHACIVFELAGQTLSEF---KSINYLNMNCMKDISRQ 128
H +VV+ +D T D + +VFE Q L + L +KD+ RQ
Sbjct: 64 EHP---NVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 129 ILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA--YKN 186
L+GL +LH C +VH DLK +NILV + T +AD G A Y
Sbjct: 121 FLRGLDFLHANC-IVHRDLKPENILVTSG---------------GTVKLADFGLARIYSY 164
Query: 187 NAFEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERM 246
+ +RA EV+L PVD+WS CI +M + LF N ++ + ++
Sbjct: 165 QMALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGN-SEADQLGKI 223
Query: 247 TEILGDIP--DKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDL 304
+++G P D + S + F + + + V + ++E G + L
Sbjct: 224 FDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPE------MEESG---------AQL 268
Query: 305 ILSMLHWDSDERFTA 319
+L ML ++ +R +A
Sbjct: 269 LLEMLTFNPHKRISA 283
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 140/325 (43%), Gaps = 51/325 (15%)
Query: 10 IGDTLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKF------LHI-TRNE 62
+G S Y + ++G G TV+ + + +VA+K ++ P L I T E
Sbjct: 3 LGSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVR-VPNGGGGGGGLPISTVRE 61
Query: 63 VQLLKITISNHHEYQNHVVKFLDH-FTVLGDNGVHACIVFELAGQTLSEF---KSINYLN 118
V LL+ + H +VV+ +D T D + +VFE Q L + L
Sbjct: 62 VALLRRLEAFEHP---NVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLP 118
Query: 119 MNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIA 178
+KD+ RQ L+GL +LH C +VH DLK +NILV + T +A
Sbjct: 119 AETIKDLMRQFLRGLDFLHANC-IVHRDLKPENILVTSG---------------GTVKLA 162
Query: 179 DLGYA--YKNNAFEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPN 236
D G A Y + +RA EV+L PVD+WS CI +M + LF N
Sbjct: 163 DFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGN 222
Query: 237 LNDFQHIERMTEILGDIP--DKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFS 294
++ + ++ +++G P D + S + F + + + V + ++E G
Sbjct: 223 -SEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPE------MEESG-- 273
Query: 295 KSESLTFSDLILSMLHWDSDERFTA 319
+ L+L ML ++ +R +A
Sbjct: 274 -------AQLLLEMLTFNPHKRISA 291
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 141/315 (44%), Gaps = 48/315 (15%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHH 74
Y + +G G +V +++++ +AVK + + +H R E++LLK H
Sbjct: 53 YQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLK-----HM 107
Query: 75 EYQNHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQIL 130
+++N V+ LD FT N V+ +V L G L+ L + ++ + QIL
Sbjct: 108 KHEN-VIGLLDVFTPATSLEEFNDVY--LVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 164
Query: 131 KGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFE 190
+GL Y+H D++H DLK N+ V L I D G A +
Sbjct: 165 RGLKYIHS-ADIIHRDLKPSNLAVNEDCEL---------------KILDFGLARHTDDEM 208
Query: 191 FDYIQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEI 249
Y+ R +RA E++L VDIWS CI +++TG LF P + ++++ +
Sbjct: 209 TGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLF-PGTDHINQLQQIMRL 267
Query: 250 LGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSK---SESLTFSDLIL 306
G P V SR+ + + + N++ Q + +R F+ + DL+
Sbjct: 268 TGTPPASVI--SRMPS----HEARNYINSLPQ------MPKRNFADVFIGANPLAVDLLE 315
Query: 307 SMLHWDSDERFTAAQ 321
ML D+D+R TA++
Sbjct: 316 KMLVLDTDKRITASE 330
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 136/309 (44%), Gaps = 42/309 (13%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHHEYQ 77
+R +G G +V ++ VAVK + + +H R E++LLK H +++
Sbjct: 33 LRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLK-----HLKHE 87
Query: 78 NHVVKFLDHFTVLG--DNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYY 135
N V+ LD FT ++ +V L G L+ L+ ++ + Q+L+GL Y
Sbjct: 88 N-VIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKY 146
Query: 136 LHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQ 195
+H ++H DLK N+ V L I D G A + + Y+
Sbjct: 147 IHS-AGIIHRDLKPSNVAVNEDSEL---------------RILDFGLARQADEEMTGYVA 190
Query: 196 AREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILG-DI 253
R +RA E++L + VDIWS CI +++ G+ LF P + ++R+ E++G
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALF-PGSDYIDQLKRIMEVVGTPS 249
Query: 254 PDKVCNQSRLKAEFYDED-GKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSMLHWD 312
P+ + S A Y + + ++ I F + L DL+ ML D
Sbjct: 250 PEVLAKISSEHARTYIQSLPPMPQKDLSSI----------FRGANPLAI-DLLGRMLVLD 298
Query: 313 SDERFTAAQ 321
SD+R +AA+
Sbjct: 299 SDQRVSAAE 307
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 136/309 (44%), Gaps = 42/309 (13%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHHEYQ 77
+R +G G +V ++ VAVK + + +H R E++LLK H +++
Sbjct: 33 LRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLK-----HLKHE 87
Query: 78 NHVVKFLDHFTVLG--DNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYY 135
N V+ LD FT ++ +V L G L+ L+ ++ + Q+L+GL Y
Sbjct: 88 N-VIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKY 146
Query: 136 LHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQ 195
+H ++H DLK N+ V L I D G A + + Y+
Sbjct: 147 IHS-AGIIHRDLKPSNVAVNEDSEL---------------RILDFGLARQADEEMTGYVA 190
Query: 196 AREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILG-DI 253
R +RA E++L + VDIWS CI +++ G+ LF P + ++R+ E++G
Sbjct: 191 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALF-PGSDYIDQLKRIMEVVGTPS 249
Query: 254 PDKVCNQSRLKAEFYDED-GKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSMLHWD 312
P+ + S A Y + + ++ I F + L DL+ ML D
Sbjct: 250 PEVLAKISSEHARTYIQSLPPMPQKDLSSI----------FRGANPLAI-DLLGRMLVLD 298
Query: 313 SDERFTAAQ 321
SD+R +AA+
Sbjct: 299 SDQRVSAAE 307
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 134/309 (43%), Gaps = 42/309 (13%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHHEYQ 77
+ +G G +V ++ +T VAVK + + +H R E++LLK H +++
Sbjct: 32 LSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HMKHE 86
Query: 78 NHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGL 133
N V+ LD FT N V+ +V L G L+ L + ++ + QIL+GL
Sbjct: 87 N-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 143
Query: 134 YYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDY 193
Y+H D++H DLK N+ V L I D G A + Y
Sbjct: 144 KYIHS-ADIIHRDLKPSNLAVNEDXEL---------------KILDFGLARHTDDEMTGY 187
Query: 194 IQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGD 252
+ R +RA E++L + VDIWS CI +++TG LF P + ++ + ++G
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVG- 245
Query: 253 IPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSMLHWD 312
+ L + E + N ++ ++ + + DL+ ML D
Sbjct: 246 -----TPGAELLKKISSESAR---NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 297
Query: 313 SDERFTAAQ 321
SD+R TAAQ
Sbjct: 298 SDKRITAAQ 306
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 135/312 (43%), Gaps = 42/312 (13%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHH 74
Y + +G G +V ++ +T VAVK + + +H R E++LLK H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HM 78
Query: 75 EYQNHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQIL 130
+++N V+ LD FT N V+ +V L G L+ L + ++ + QIL
Sbjct: 79 KHEN-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 131 KGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFE 190
+GL Y+H D++H DLK N+ V L I D G A +
Sbjct: 136 RGLKYIHS-ADIIHRDLKPSNLAVNEDCEL---------------KILDFGLARHTDDEM 179
Query: 191 FDYIQAREFRAAEVVLGG-KLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEI 249
Y+ R +RA E++L + VDIWS CI +++TG LF P + ++ + +
Sbjct: 180 TGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRL 238
Query: 250 LGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSML 309
+G + L + E + N ++ ++ + + DL+ ML
Sbjct: 239 VG------TPGAELLKKISSESAR---NYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 289
Query: 310 HWDSDERFTAAQ 321
DSD+R TAAQ
Sbjct: 290 VLDSDKRITAAQ 301
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 135/312 (43%), Gaps = 42/312 (13%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHH 74
Y + +G G +V ++ +T VAVK + + +H R E++LLK H
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HM 84
Query: 75 EYQNHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQIL 130
+++N V+ LD FT N V+ +V L G L+ L + ++ + QIL
Sbjct: 85 KHEN-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 141
Query: 131 KGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFE 190
+GL Y+H D++H DLK N+ V L I D G A +
Sbjct: 142 RGLKYIHS-ADIIHRDLKPSNLAVNEDSEL---------------KILDFGLARHTDDEM 185
Query: 191 FDYIQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEI 249
Y+ R +RA E++L + VDIWS CI +++TG LF P + ++ + +
Sbjct: 186 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRL 244
Query: 250 LGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSML 309
+G + L + E + N ++ ++ + + DL+ ML
Sbjct: 245 VG------TPGAELLKKISSESAR---NYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 295
Query: 310 HWDSDERFTAAQ 321
DSD+R TAAQ
Sbjct: 296 VLDSDKRITAAQ 307
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 135/312 (43%), Gaps = 42/312 (13%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHH 74
Y + +G G +V ++ +T VAVK + + +H R E++LLK H
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HM 80
Query: 75 EYQNHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQIL 130
+++N V+ LD FT N V+ +V L G L+ L + ++ + QIL
Sbjct: 81 KHEN-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 137
Query: 131 KGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFE 190
+GL Y+H D++H DLK N+ V L I D G A +
Sbjct: 138 RGLKYIHS-ADIIHRDLKPSNLAVNEDSEL---------------KILDFGLARHTDDEM 181
Query: 191 FDYIQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEI 249
Y+ R +RA E++L + VDIWS CI +++TG LF P + ++ + +
Sbjct: 182 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRL 240
Query: 250 LGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSML 309
+G + L + E + N ++ ++ + + DL+ ML
Sbjct: 241 VG------TPGAELLKKISSESAR---NYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 291
Query: 310 HWDSDERFTAAQ 321
DSD+R TAAQ
Sbjct: 292 VLDSDKRITAAQ 303
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 134/309 (43%), Gaps = 42/309 (13%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHHEYQ 77
+ +G G +V ++ +T VAVK + + +H R E++LLK H +++
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HMKHE 81
Query: 78 NHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGL 133
N V+ LD FT N V+ +V L G L+ L + ++ + QIL+GL
Sbjct: 82 N-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGL 138
Query: 134 YYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDY 193
Y+H D++H DLK N+ V L I D G A + Y
Sbjct: 139 KYIHS-ADIIHRDLKPSNLAVNEDXEL---------------KILDFGLARHTDDEMTGY 182
Query: 194 IQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGD 252
+ R +RA E++L + VDIWS CI +++TG LF P + ++ + ++G
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVG- 240
Query: 253 IPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSMLHWD 312
+ L + E + N ++ ++ + + DL+ ML D
Sbjct: 241 -----TPGAELLKKISSESAR---NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 292
Query: 313 SDERFTAAQ 321
SD+R TAAQ
Sbjct: 293 SDKRITAAQ 301
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 135/312 (43%), Gaps = 42/312 (13%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHH 74
Y + +G G +V ++ +T VAVK + + +H R E++LLK H
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HM 83
Query: 75 EYQNHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQIL 130
+++N V+ LD FT N V+ +V L G L+ L + ++ + QIL
Sbjct: 84 KHEN-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 140
Query: 131 KGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFE 190
+GL Y+H D++H DLK N+ V L I D G A +
Sbjct: 141 RGLKYIHS-ADIIHRDLKPSNLAVNEDXEL---------------KILDFGLARHTDDEM 184
Query: 191 FDYIQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEI 249
Y+ R +RA E++L + VDIWS CI +++TG LF P + ++ + +
Sbjct: 185 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRL 243
Query: 250 LGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSML 309
+G + L + E + N ++ ++ + + DL+ ML
Sbjct: 244 VG------TPGAELLKKISSESAR---NYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 294
Query: 310 HWDSDERFTAAQ 321
DSD+R TAAQ
Sbjct: 295 VLDSDKRITAAQ 306
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 135/312 (43%), Gaps = 42/312 (13%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHH 74
Y + +G G +V ++ +T VAVK + + +H R E++LLK H
Sbjct: 35 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HM 89
Query: 75 EYQNHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQIL 130
+++N V+ LD FT N V+ +V L G L+ L + ++ + QIL
Sbjct: 90 KHEN-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 146
Query: 131 KGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFE 190
+GL Y+H D++H DLK N+ V L I D G A +
Sbjct: 147 RGLKYIHS-ADIIHRDLKPSNLAVNEDXEL---------------KILDFGLARHTDDEM 190
Query: 191 FDYIQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEI 249
Y+ R +RA E++L + VDIWS CI +++TG LF P + ++ + +
Sbjct: 191 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRL 249
Query: 250 LGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSML 309
+G + L + E + N ++ ++ + + DL+ ML
Sbjct: 250 VG------TPGAELLKKISSESAR---NYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 300
Query: 310 HWDSDERFTAAQ 321
DSD+R TAAQ
Sbjct: 301 VLDSDKRITAAQ 312
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 135/312 (43%), Gaps = 42/312 (13%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHH 74
Y + +G G +V ++ +T VAVK + K +H R E++LLK H
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLK-----HM 90
Query: 75 EYQNHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQIL 130
+++N V+ LD FT N V+ +V L G L+ L + ++ + QIL
Sbjct: 91 KHEN-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 147
Query: 131 KGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFE 190
+GL Y+H D++H DLK N+ V L I D G A +
Sbjct: 148 RGLKYIHS-ADIIHRDLKPSNLAVNEDCEL---------------KILDFGLARHTDDEM 191
Query: 191 FDYIQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEI 249
Y+ R +RA E++L + VDIWS CI +++TG LF P + ++ + +
Sbjct: 192 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRL 250
Query: 250 LGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSML 309
+G + L + E + N ++ ++ + + DL+ ML
Sbjct: 251 VG------TPGAELLKKISSESAR---NYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 301
Query: 310 HWDSDERFTAAQ 321
DSD+R TAAQ
Sbjct: 302 VLDSDKRITAAQ 313
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 134/309 (43%), Gaps = 42/309 (13%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHHEYQ 77
+ +G G +V ++ +T VAVK + + +H R E++LLK H +++
Sbjct: 23 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HMKHE 77
Query: 78 NHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGL 133
N V+ LD FT N V+ +V L G L+ L + ++ + QIL+GL
Sbjct: 78 N-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 134
Query: 134 YYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDY 193
Y+H D++H DLK N+ V L I D G A + Y
Sbjct: 135 KYIHS-ADIIHRDLKPSNLAVNEDCEL---------------KILDFGLARHTDDEMTGY 178
Query: 194 IQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGD 252
+ R +RA E++L + VDIWS CI +++TG LF P + ++ + ++G
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVG- 236
Query: 253 IPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSMLHWD 312
+ L + E + N ++ ++ + + DL+ ML D
Sbjct: 237 -----TPGAELLKKISSESAR---NYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLD 288
Query: 313 SDERFTAAQ 321
SD+R TAAQ
Sbjct: 289 SDKRITAAQ 297
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 135/312 (43%), Gaps = 42/312 (13%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHH 74
Y + +G G +V ++ +T VAVK + + +H R E++LLK H
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HM 98
Query: 75 EYQNHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQIL 130
+++N V+ LD FT N V+ +V L G L+ L + ++ + QIL
Sbjct: 99 KHEN-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 155
Query: 131 KGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFE 190
+GL Y+H D++H DLK N+ V L I D G A +
Sbjct: 156 RGLKYIHS-ADIIHRDLKPSNLAVNEDCEL---------------KILDFGLARHTDDEM 199
Query: 191 FDYIQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEI 249
Y+ R +RA E++L + VDIWS CI +++TG LF P + ++ + +
Sbjct: 200 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRL 258
Query: 250 LGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSML 309
+G + L + E + N ++ ++ + + DL+ ML
Sbjct: 259 VG------TPGAELLKKISSESAR---NYIQSLAQMPKMNFANVFIGANPLAVDLLEKML 309
Query: 310 HWDSDERFTAAQ 321
DSD+R TAAQ
Sbjct: 310 VLDSDKRITAAQ 321
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 135/312 (43%), Gaps = 42/312 (13%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHH 74
Y + +G G +V ++ +T VAVK + + +H R E++LLK H
Sbjct: 43 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HM 97
Query: 75 EYQNHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQIL 130
+++N V+ LD FT N V+ +V L G L+ L + ++ + QIL
Sbjct: 98 KHEN-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 154
Query: 131 KGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFE 190
+GL Y+H D++H DLK N+ V L I D G A +
Sbjct: 155 RGLKYIHS-ADIIHRDLKPSNLAVNEDCEL---------------KILDFGLARHTDDEM 198
Query: 191 FDYIQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEI 249
Y+ R +RA E++L + VDIWS CI +++TG LF P + ++ + +
Sbjct: 199 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRL 257
Query: 250 LGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSML 309
+G + L + E + N ++ ++ + + DL+ ML
Sbjct: 258 VG------TPGAELLKKISSESAR---NYIQSLAQMPKMNFANVFIGANPLAVDLLEKML 308
Query: 310 HWDSDERFTAAQ 321
DSD+R TAAQ
Sbjct: 309 VLDSDKRITAAQ 320
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 134/309 (43%), Gaps = 42/309 (13%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHHEYQ 77
+ +G G +V ++ +T VAVK + + +H R E++LLK H +++
Sbjct: 23 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HMKHE 77
Query: 78 NHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGL 133
N V+ LD FT N V+ +V L G L+ L + ++ + QIL+GL
Sbjct: 78 N-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGL 134
Query: 134 YYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDY 193
Y+H D++H DLK N+ V L I D G A + Y
Sbjct: 135 KYIHS-ADIIHRDLKPSNLAVNEDCEL---------------KILDFGLARHTDDEMTGY 178
Query: 194 IQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGD 252
+ R +RA E++L + VDIWS CI +++TG LF P + ++ + ++G
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVG- 236
Query: 253 IPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSMLHWD 312
+ L + E + N ++ ++ + + DL+ ML D
Sbjct: 237 -----TPGAELLKKISSESAR---NYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLD 288
Query: 313 SDERFTAAQ 321
SD+R TAAQ
Sbjct: 289 SDKRITAAQ 297
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 135/312 (43%), Gaps = 42/312 (13%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHH 74
Y + +G G +V ++ +T VAVK + + +H R E++LLK H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HM 78
Query: 75 EYQNHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQIL 130
+++N V+ LD FT N V+ +V L G L+ L + ++ + QIL
Sbjct: 79 KHEN-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 131 KGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFE 190
+GL Y+H D++H DLK N+ V L I D G A +
Sbjct: 136 RGLKYIHS-ADIIHRDLKPSNLAVNEDCEL---------------KILDFGLARHTDDEM 179
Query: 191 FDYIQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEI 249
Y+ R +RA E++L + VDIWS CI +++TG LF P + ++ + +
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRL 238
Query: 250 LGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSML 309
+G + L + E + N ++ ++ + + DL+ ML
Sbjct: 239 VG------TPGAELLKKISSESAR---NYIQSLAQMPKMNFANVFIGANPLAVDLLEKML 289
Query: 310 HWDSDERFTAAQ 321
DSD+R TAAQ
Sbjct: 290 VLDSDKRITAAQ 301
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 134/309 (43%), Gaps = 42/309 (13%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHHEYQ 77
+ +G G +V ++ +T VAVK + + +H R E++LLK H +++
Sbjct: 24 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HMKHE 78
Query: 78 NHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGL 133
N V+ LD FT N V+ +V L G L+ L + ++ + QIL+GL
Sbjct: 79 N-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 135
Query: 134 YYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDY 193
Y+H D++H DLK N+ V L I D G A + Y
Sbjct: 136 KYIHS-ADIIHRDLKPSNLAVNEDCEL---------------KILDFGLARHTDDEMTGY 179
Query: 194 IQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGD 252
+ R +RA E++L + VDIWS CI +++TG LF P + ++ + ++G
Sbjct: 180 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVG- 237
Query: 253 IPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSMLHWD 312
+ L + E + N ++ ++ + + DL+ ML D
Sbjct: 238 -----TPGAELLKKISSESAR---NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 289
Query: 313 SDERFTAAQ 321
SD+R TAAQ
Sbjct: 290 SDKRITAAQ 298
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 134/309 (43%), Gaps = 42/309 (13%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHHEYQ 77
+ +G G +V ++ +T VAVK + + +H R E++LLK H +++
Sbjct: 25 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HMKHE 79
Query: 78 NHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGL 133
N V+ LD FT N V+ +V L G L+ L + ++ + QIL+GL
Sbjct: 80 N-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 136
Query: 134 YYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDY 193
Y+H D++H DLK N+ V L I D G A + Y
Sbjct: 137 KYIHS-ADIIHRDLKPSNLAVNEDCEL---------------KILDFGLARHTDDEMTGY 180
Query: 194 IQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGD 252
+ R +RA E++L + VDIWS CI +++TG LF P + ++ + ++G
Sbjct: 181 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVG- 238
Query: 253 IPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSMLHWD 312
+ L + E + N ++ ++ + + DL+ ML D
Sbjct: 239 -----TPGAELLKKISSESAR---NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 290
Query: 313 SDERFTAAQ 321
SD+R TAAQ
Sbjct: 291 SDKRITAAQ 299
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 134/309 (43%), Gaps = 42/309 (13%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHHEYQ 77
+ +G G +V ++ +T VAVK + + +H R E++LLK H +++
Sbjct: 23 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HMKHE 77
Query: 78 NHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGL 133
N V+ LD FT N V+ +V L G L+ L + ++ + QIL+GL
Sbjct: 78 N-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 134
Query: 134 YYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDY 193
Y+H D++H DLK N+ V L I D G A + Y
Sbjct: 135 KYIHS-ADIIHRDLKPSNLAVNEDCEL---------------KILDFGLARHTDDEMTGY 178
Query: 194 IQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGD 252
+ R +RA E++L + VDIWS CI +++TG LF P + ++ + ++G
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVG- 236
Query: 253 IPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSMLHWD 312
+ L + E + N ++ ++ + + DL+ ML D
Sbjct: 237 -----TPGAELLKKISSESAR---NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 288
Query: 313 SDERFTAAQ 321
SD+R TAAQ
Sbjct: 289 SDKRITAAQ 297
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 135/312 (43%), Gaps = 42/312 (13%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHH 74
Y + +G G +V ++ +T VAVK + + +H R E++LLK H
Sbjct: 47 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HM 101
Query: 75 EYQNHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQIL 130
+++N V+ LD FT N V+ +V L G L+ L + ++ + QIL
Sbjct: 102 KHEN-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 158
Query: 131 KGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFE 190
+GL Y+H D++H DLK N+ V L I D G A +
Sbjct: 159 RGLKYIHS-ADIIHRDLKPSNLAVNEDCEL---------------KILDFGLARHTDDEM 202
Query: 191 FDYIQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEI 249
Y+ R +RA E++L + VDIWS CI +++TG LF P + ++ + +
Sbjct: 203 XGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRL 261
Query: 250 LGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSML 309
+G + L + E + N ++ ++ + + DL+ ML
Sbjct: 262 VG------TPGAELLKKISSESAR---NYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 312
Query: 310 HWDSDERFTAAQ 321
DSD+R TAAQ
Sbjct: 313 VLDSDKRITAAQ 324
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 134/309 (43%), Gaps = 42/309 (13%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHHEYQ 77
+ +G G +V ++ +T VAVK + + +H R E++LLK H +++
Sbjct: 24 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HMKHE 78
Query: 78 NHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGL 133
N V+ LD FT N V+ +V L G L+ L + ++ + QIL+GL
Sbjct: 79 N-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 135
Query: 134 YYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDY 193
Y+H D++H DLK N+ V L I D G A + Y
Sbjct: 136 KYIHS-ADIIHRDLKPSNLAVNEDCEL---------------KILDFGLARHTDDEMTGY 179
Query: 194 IQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGD 252
+ R +RA E++L + VDIWS CI +++TG LF P + ++ + ++G
Sbjct: 180 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVG- 237
Query: 253 IPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSMLHWD 312
+ L + E + N ++ ++ + + DL+ ML D
Sbjct: 238 -----TPGAELLKKISSESAR---NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 289
Query: 313 SDERFTAAQ 321
SD+R TAAQ
Sbjct: 290 SDKRITAAQ 298
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 134/309 (43%), Gaps = 42/309 (13%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHHEYQ 77
+ +G G +V ++ +T VAVK + + +H R E++LLK H +++
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HMKHE 81
Query: 78 NHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGL 133
N V+ LD FT N V+ +V L G L+ L + ++ + QIL+GL
Sbjct: 82 N-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 134 YYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDY 193
Y+H D++H DLK N+ V L I D G A + Y
Sbjct: 139 KYIHS-ADIIHRDLKPSNLAVNEDCEL---------------KILDFGLARHTDDEMTGY 182
Query: 194 IQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGD 252
+ R +RA E++L + VDIWS CI +++TG LF P + ++ + ++G
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVG- 240
Query: 253 IPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSMLHWD 312
+ L + E + N ++ ++ + + DL+ ML D
Sbjct: 241 -----TPGAELLKKISSESAR---NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 292
Query: 313 SDERFTAAQ 321
SD+R TAAQ
Sbjct: 293 SDKRITAAQ 301
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 134/309 (43%), Gaps = 42/309 (13%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHHEYQ 77
+ +G G +V ++ +T VAVK + + +H R E++LLK H +++
Sbjct: 32 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HMKHE 86
Query: 78 NHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGL 133
N V+ LD FT N V+ +V L G L+ L + ++ + QIL+GL
Sbjct: 87 N-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 143
Query: 134 YYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDY 193
Y+H D++H DLK N+ V L I D G A + Y
Sbjct: 144 KYIHS-ADIIHRDLKPSNLAVNEDCEL---------------KILDFGLARHTDDEMTGY 187
Query: 194 IQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGD 252
+ R +RA E++L + VDIWS CI +++TG LF P + ++ + ++G
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVG- 245
Query: 253 IPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSMLHWD 312
+ L + E + N ++ ++ + + DL+ ML D
Sbjct: 246 -----TPGAELLKKISSESAR---NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 297
Query: 313 SDERFTAAQ 321
SD+R TAAQ
Sbjct: 298 SDKRITAAQ 306
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 135/312 (43%), Gaps = 42/312 (13%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHH 74
Y + +G G +V ++ +T VAVK + + +H R E++LLK H
Sbjct: 34 YQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HM 88
Query: 75 EYQNHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQIL 130
+++N V+ LD FT N V+ +V L G L+ L + ++ + QIL
Sbjct: 89 KHEN-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 145
Query: 131 KGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFE 190
+GL Y+H D++H DLK N+ V L I D G A +
Sbjct: 146 RGLKYIHS-ADIIHRDLKPSNLAVNEDCEL---------------KILDFGLARHTDDEM 189
Query: 191 FDYIQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEI 249
Y+ R +RA E++L + VDIWS CI +++TG LF P + ++ + +
Sbjct: 190 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRL 248
Query: 250 LGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSML 309
+G + L + E + N ++ ++ + + DL+ ML
Sbjct: 249 VG------TPGAELLKKISSESAR---NYIQSLAQMPKMNFANVFIGANPLAVDLLEKML 299
Query: 310 HWDSDERFTAAQ 321
DSD+R TAAQ
Sbjct: 300 VLDSDKRITAAQ 311
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 135/312 (43%), Gaps = 42/312 (13%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHH 74
Y + +G G +V ++ +T VAVK + + +H R E++LLK H
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HM 90
Query: 75 EYQNHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQIL 130
+++N V+ LD FT N V+ +V L G L+ L + ++ + QIL
Sbjct: 91 KHEN-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 147
Query: 131 KGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFE 190
+GL Y+H D++H DLK N+ V L I D G A +
Sbjct: 148 RGLKYIHS-ADIIHRDLKPSNLAVNEDCEL---------------KILDFGLARHTDDEM 191
Query: 191 FDYIQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEI 249
Y+ R +RA E++L + VDIWS CI +++TG LF P + ++ + +
Sbjct: 192 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRL 250
Query: 250 LGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSML 309
+G + L + E + N ++ ++ + + DL+ ML
Sbjct: 251 VG------TPGAELLKKISSESAR---NYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 301
Query: 310 HWDSDERFTAAQ 321
DSD+R TAAQ
Sbjct: 302 VLDSDKRITAAQ 313
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 135/312 (43%), Gaps = 42/312 (13%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHH 74
Y + +G G +V ++ +T VAVK + + +H R E++LLK H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HM 78
Query: 75 EYQNHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQIL 130
+++N V+ LD FT N V+ +V L G L+ L + ++ + QIL
Sbjct: 79 KHEN-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 131 KGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFE 190
+GL Y+H D++H DLK N+ V L I D G A +
Sbjct: 136 RGLKYIHS-ADIIHRDLKPSNLAVNEDCEL---------------KILDFGLARHTDDEM 179
Query: 191 FDYIQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEI 249
Y+ R +RA E++L + VDIWS CI +++TG LF P + ++ + +
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRL 238
Query: 250 LGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSML 309
+G + L + E + N ++ ++ + + DL+ ML
Sbjct: 239 VG------TPGAELLKKISSESAR---NYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 289
Query: 310 HWDSDERFTAAQ 321
DSD+R TAAQ
Sbjct: 290 VLDSDKRITAAQ 301
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 135/312 (43%), Gaps = 42/312 (13%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHH 74
Y + +G G +V ++ +T VAVK + + +H R E++LLK H
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HM 80
Query: 75 EYQNHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQIL 130
+++N V+ LD FT N V+ +V L G L+ L + ++ + QIL
Sbjct: 81 KHEN-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 137
Query: 131 KGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFE 190
+GL Y+H D++H DLK N+ V L I D G A +
Sbjct: 138 RGLKYIHS-ADIIHRDLKPSNLAVNEDCEL---------------KILDFGLARHTDDEM 181
Query: 191 FDYIQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEI 249
Y+ R +RA E++L + VDIWS CI +++TG LF P + ++ + +
Sbjct: 182 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRL 240
Query: 250 LGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSML 309
+G + L + E + N ++ ++ + + DL+ ML
Sbjct: 241 VG------TPGAELLKKISSESAR---NYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 291
Query: 310 HWDSDERFTAAQ 321
DSD+R TAAQ
Sbjct: 292 VLDSDKRITAAQ 303
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 135/312 (43%), Gaps = 42/312 (13%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHH 74
Y + +G G +V ++ +T VAVK + + +H R E++LLK H
Sbjct: 47 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HM 101
Query: 75 EYQNHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQIL 130
+++N V+ LD FT N V+ +V L G L+ L + ++ + QIL
Sbjct: 102 KHEN-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 158
Query: 131 KGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFE 190
+GL Y+H D++H DLK N+ V L I D G A +
Sbjct: 159 RGLKYIHS-ADIIHRDLKPSNLAVNEDCEL---------------KILDFGLARHTDDEM 202
Query: 191 FDYIQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEI 249
Y+ R +RA E++L + VDIWS CI +++TG LF P + ++ + +
Sbjct: 203 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRL 261
Query: 250 LGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSML 309
+G + L + E + N ++ ++ + + DL+ ML
Sbjct: 262 VG------TPGAELLKKISSESAR---NYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 312
Query: 310 HWDSDERFTAAQ 321
DSD+R TAAQ
Sbjct: 313 VLDSDKRITAAQ 324
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 135/312 (43%), Gaps = 42/312 (13%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHH 74
Y + +G G +V ++ +T VAVK + + +H R E++LLK H
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HM 90
Query: 75 EYQNHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQIL 130
+++N V+ LD FT N V+ +V L G L+ L + ++ + QIL
Sbjct: 91 KHEN-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 147
Query: 131 KGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFE 190
+GL Y+H D++H DLK N+ V L I D G A +
Sbjct: 148 RGLKYIHS-ADIIHRDLKPSNLAVNEDCEL---------------KILDFGLARHTDDEM 191
Query: 191 FDYIQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEI 249
Y+ R +RA E++L + VDIWS CI +++TG LF P + ++ + +
Sbjct: 192 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRL 250
Query: 250 LGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSML 309
+G + L + E + N ++ ++ + + DL+ ML
Sbjct: 251 VG------TPGAELLKKISSESAR---NYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 301
Query: 310 HWDSDERFTAAQ 321
DSD+R TAAQ
Sbjct: 302 VLDSDKRITAAQ 313
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 135/312 (43%), Gaps = 42/312 (13%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHH 74
Y + +G G +V ++ +T VAVK + + +H R E++LLK H
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HM 98
Query: 75 EYQNHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQIL 130
+++N V+ LD FT N V+ +V L G L+ L + ++ + QIL
Sbjct: 99 KHEN-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 155
Query: 131 KGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFE 190
+GL Y+H D++H DLK N+ V L I D G A +
Sbjct: 156 RGLKYIHS-ADIIHRDLKPSNLAVNEDCEL---------------KILDFGLARHTDDEM 199
Query: 191 FDYIQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEI 249
Y+ R +RA E++L + VDIWS CI +++TG LF P + ++ + +
Sbjct: 200 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRL 258
Query: 250 LGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSML 309
+G + L + E + N ++ ++ + + DL+ ML
Sbjct: 259 VG------TPGAELLKKISSESAR---NYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 309
Query: 310 HWDSDERFTAAQ 321
DSD+R TAAQ
Sbjct: 310 VLDSDKRITAAQ 321
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 136/309 (44%), Gaps = 42/309 (13%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHHEYQ 77
+R +G G +V ++ VAVK + + +H R E++LLK H +++
Sbjct: 25 LRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLK-----HLKHE 79
Query: 78 NHVVKFLDHFTVLG--DNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYY 135
N V+ LD FT ++ +V L G L+ L+ ++ + Q+L+GL Y
Sbjct: 80 N-VIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKY 138
Query: 136 LHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQ 195
+H ++H DLK N+ V L I D G A + + Y+
Sbjct: 139 IHS-AGIIHRDLKPSNVAVNEDCEL---------------RILDFGLARQADEEMTGYVA 182
Query: 196 AREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILG-DI 253
R +RA E++L + VDIWS CI +++ G+ LF P + ++R+ E++G
Sbjct: 183 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALF-PGSDYIDQLKRIMEVVGTPS 241
Query: 254 PDKVCNQSRLKAEFYDED-GKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSMLHWD 312
P+ + S A Y + + ++ I F + L DL+ ML D
Sbjct: 242 PEVLAKISSEHARTYIQSLPPMPQKDLSSI----------FRGANPLAI-DLLGRMLVLD 290
Query: 313 SDERFTAAQ 321
SD+R +AA+
Sbjct: 291 SDQRVSAAE 299
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 135/312 (43%), Gaps = 42/312 (13%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHH 74
Y + +G G +V ++ +T VAVK + + +H R E++LLK H
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HM 80
Query: 75 EYQNHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQIL 130
+++N V+ LD FT N V+ +V L G L+ L + ++ + QIL
Sbjct: 81 KHEN-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 137
Query: 131 KGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFE 190
+GL Y+H D++H DLK N+ V L I D G A +
Sbjct: 138 RGLKYIHS-ADIIHRDLKPSNLAVNEDCEL---------------KILDFGLARHTDDEM 181
Query: 191 FDYIQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEI 249
Y+ R +RA E++L + VDIWS CI +++TG LF P + ++ + +
Sbjct: 182 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRL 240
Query: 250 LGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSML 309
+G + L + E + N ++ ++ + + DL+ ML
Sbjct: 241 VG------TPGAELLKKISSESAR---NYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 291
Query: 310 HWDSDERFTAAQ 321
DSD+R TAAQ
Sbjct: 292 VLDSDKRITAAQ 303
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 135/312 (43%), Gaps = 42/312 (13%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHH 74
Y + +G G +V ++ +T VAVK + + +H R E++LLK H
Sbjct: 43 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HM 97
Query: 75 EYQNHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQIL 130
+++N V+ LD FT N V+ +V L G L+ L + ++ + QIL
Sbjct: 98 KHEN-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 154
Query: 131 KGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFE 190
+GL Y+H D++H DLK N+ V L I D G A +
Sbjct: 155 RGLKYIHS-ADIIHRDLKPSNLAVNEDCEL---------------KILDFGLARHTDDEM 198
Query: 191 FDYIQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEI 249
Y+ R +RA E++L + VDIWS CI +++TG LF P + ++ + +
Sbjct: 199 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRL 257
Query: 250 LGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSML 309
+G + L + E + N ++ ++ + + DL+ ML
Sbjct: 258 VG------TPGAELLKKISSESAR---NYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 308
Query: 310 HWDSDERFTAAQ 321
DSD+R TAAQ
Sbjct: 309 VLDSDKRITAAQ 320
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 135/312 (43%), Gaps = 42/312 (13%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHH 74
Y + +G G +V ++ +T VAVK + + +H R E++LLK H
Sbjct: 35 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HM 89
Query: 75 EYQNHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQIL 130
+++N V+ LD FT N V+ +V L G L+ L + ++ + QIL
Sbjct: 90 KHEN-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 146
Query: 131 KGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFE 190
+GL Y+H D++H DLK N+ V L I D G A +
Sbjct: 147 RGLKYIHS-ADIIHRDLKPSNLAVNEDCEL---------------KILDFGLARHTDDEM 190
Query: 191 FDYIQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEI 249
Y+ R +RA E++L + VDIWS CI +++TG LF P + ++ + +
Sbjct: 191 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRL 249
Query: 250 LGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSML 309
+G + L + E + N ++ ++ + + DL+ ML
Sbjct: 250 VG------TPGAELLKKISSESAR---NYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 300
Query: 310 HWDSDERFTAAQ 321
DSD+R TAAQ
Sbjct: 301 VLDSDKRITAAQ 312
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 135/312 (43%), Gaps = 42/312 (13%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHH 74
Y + +G G +V ++ +T VAVK + + +H R E++LLK H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HM 78
Query: 75 EYQNHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQIL 130
+++N V+ LD FT N V+ +V L G L+ L + ++ + QIL
Sbjct: 79 KHEN-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 131 KGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFE 190
+GL Y+H D++H DLK N+ V L I D G A +
Sbjct: 136 RGLKYIHS-ADIIHRDLKPSNLAVNEDCEL---------------KILDFGLARHTDDEM 179
Query: 191 FDYIQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEI 249
Y+ R +RA E++L + VDIWS CI +++TG LF P + ++ + +
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRL 238
Query: 250 LGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSML 309
+G + L + E + N ++ ++ + + DL+ ML
Sbjct: 239 VG------TPGAELLKKISSESAR---NYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 289
Query: 310 HWDSDERFTAAQ 321
DSD+R TAAQ
Sbjct: 290 VLDSDKRITAAQ 301
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 135/312 (43%), Gaps = 42/312 (13%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHH 74
Y + +G G +V ++ +T VAVK + + +H R E++LLK H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HM 78
Query: 75 EYQNHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQIL 130
+++N V+ LD FT N V+ +V L G L+ L + ++ + QIL
Sbjct: 79 KHEN-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 131 KGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFE 190
+GL Y+H D++H DLK N+ V L I D G A +
Sbjct: 136 RGLKYIHS-ADIIHRDLKPSNLAVNEDCEL---------------KILDFGLARHTDDEM 179
Query: 191 FDYIQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEI 249
Y+ R +RA E++L + VDIWS CI +++TG LF P + ++ + +
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRL 238
Query: 250 LGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSML 309
+G + L + E + N ++ ++ + + DL+ ML
Sbjct: 239 VG------TPGAELLKKISSESAR---NYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 289
Query: 310 HWDSDERFTAAQ 321
DSD+R TAAQ
Sbjct: 290 VLDSDKRITAAQ 301
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 134/309 (43%), Gaps = 42/309 (13%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHHEYQ 77
+ +G G +V ++ +T VAVK + + +H R E++LLK H +++
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HMKHE 81
Query: 78 NHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGL 133
N V+ LD FT N V+ +V L G L+ L + ++ + QIL+GL
Sbjct: 82 N-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGL 138
Query: 134 YYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDY 193
Y+H D++H DLK N+ V L I D G A + Y
Sbjct: 139 KYIHS-ADIIHRDLKPSNLAVNEDCEL---------------KILDFGLARHTDDEMTGY 182
Query: 194 IQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGD 252
+ R +RA E++L + VDIWS CI +++TG LF P + ++ + ++G
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVG- 240
Query: 253 IPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSMLHWD 312
+ L + E + N ++ ++ + + DL+ ML D
Sbjct: 241 -----TPGAELLKKISSESAR---NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 292
Query: 313 SDERFTAAQ 321
SD+R TAAQ
Sbjct: 293 SDKRITAAQ 301
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 135/312 (43%), Gaps = 42/312 (13%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHH 74
Y + +G G +V ++ +T VAVK + + +H R E++LLK H
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HM 85
Query: 75 EYQNHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQIL 130
+++N V+ LD FT N V+ +V L G L+ L + ++ + QIL
Sbjct: 86 KHEN-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 142
Query: 131 KGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFE 190
+GL Y+H D++H DLK N+ V L I D G A +
Sbjct: 143 RGLKYIHS-ADIIHRDLKPSNLAVNEDCEL---------------KILDFGLARHTDDEM 186
Query: 191 FDYIQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEI 249
Y+ R +RA E++L + VDIWS CI +++TG LF P + ++ + +
Sbjct: 187 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRL 245
Query: 250 LGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSML 309
+G + L + E + N ++ ++ + + DL+ ML
Sbjct: 246 VG------TPGAELLKKISSESAR---NYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 296
Query: 310 HWDSDERFTAAQ 321
DSD+R TAAQ
Sbjct: 297 VLDSDKRITAAQ 308
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 135/312 (43%), Gaps = 42/312 (13%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHH 74
Y + +G G +V ++ +T VAVK + + +H R E++LLK H
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HM 84
Query: 75 EYQNHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQIL 130
+++N V+ LD FT N V+ +V L G L+ L + ++ + QIL
Sbjct: 85 KHEN-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 141
Query: 131 KGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFE 190
+GL Y+H D++H DLK N+ V L I D G A +
Sbjct: 142 RGLKYIHS-ADIIHRDLKPSNLAVNEDCEL---------------KILDFGLARHTDDEM 185
Query: 191 FDYIQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEI 249
Y+ R +RA E++L + VDIWS CI +++TG LF P + ++ + +
Sbjct: 186 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRL 244
Query: 250 LGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSML 309
+G + L + E + N ++ ++ + + DL+ ML
Sbjct: 245 VG------TPGAELLKKISSESAR---NYIQSLAQMPKMNFANVFIGANPLAVDLLEKML 295
Query: 310 HWDSDERFTAAQ 321
DSD+R TAAQ
Sbjct: 296 VLDSDKRITAAQ 307
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 135/312 (43%), Gaps = 42/312 (13%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHH 74
Y + +G G +V ++ +T VAVK + + +H R E++LLK H
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HM 83
Query: 75 EYQNHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQIL 130
+++N V+ LD FT N V+ +V L G L+ L + ++ + QIL
Sbjct: 84 KHEN-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 140
Query: 131 KGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFE 190
+GL Y+H D++H DLK N+ V L I D G A +
Sbjct: 141 RGLKYIHS-ADIIHRDLKPSNLAVNEDCEL---------------KILDFGLARHTDDEM 184
Query: 191 FDYIQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEI 249
Y+ R +RA E++L + VDIWS CI +++TG LF P + ++ + +
Sbjct: 185 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRL 243
Query: 250 LGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSML 309
+G + L + E + N ++ ++ + + DL+ ML
Sbjct: 244 VG------TPGAELLKKISSESAR---NYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 294
Query: 310 HWDSDERFTAAQ 321
DSD+R TAAQ
Sbjct: 295 VLDSDKRITAAQ 306
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 135/312 (43%), Gaps = 42/312 (13%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHH 74
Y + +G G +V ++ +T VAVK + + +H R E++LLK H
Sbjct: 23 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HM 77
Query: 75 EYQNHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQIL 130
+++N V+ LD FT N V+ +V L G L+ L + ++ + QIL
Sbjct: 78 KHEN-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 134
Query: 131 KGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFE 190
+GL Y+H D++H DLK N+ V L I D G A +
Sbjct: 135 RGLKYIHS-ADIIHRDLKPSNLAVNEDCEL---------------KILDFGLARHTDDEM 178
Query: 191 FDYIQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEI 249
Y+ R +RA E++L + VDIWS CI +++TG LF P + ++ + +
Sbjct: 179 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRL 237
Query: 250 LGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSML 309
+G + L + E + N ++ ++ + + DL+ ML
Sbjct: 238 VG------TPGAELLKKISSESAR---NYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 288
Query: 310 HWDSDERFTAAQ 321
DSD+R TAAQ
Sbjct: 289 VLDSDKRITAAQ 300
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 135/312 (43%), Gaps = 42/312 (13%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHH 74
Y + +G G +V ++ +T VAVK + + +H R E++LLK H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HM 78
Query: 75 EYQNHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQIL 130
+++N V+ LD FT N V+ +V L G L+ L + ++ + QIL
Sbjct: 79 KHEN-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 131 KGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFE 190
+GL Y+H D++H DLK N+ V L I D G A +
Sbjct: 136 RGLKYIHS-ADIIHRDLKPSNLAVNEDCEL---------------KILDFGLARHTDDEM 179
Query: 191 FDYIQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEI 249
Y+ R +RA E++L + VDIWS CI +++TG LF P + ++ + +
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRL 238
Query: 250 LGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSML 309
+G + L + E + N ++ ++ + + DL+ ML
Sbjct: 239 VG------TPGAELLKKISSESAR---NYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 289
Query: 310 HWDSDERFTAAQ 321
DSD+R TAAQ
Sbjct: 290 VLDSDKRITAAQ 301
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 135/312 (43%), Gaps = 42/312 (13%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHH 74
Y + +G G +V ++ +T VAVK + + +H R E++LLK H
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HM 80
Query: 75 EYQNHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQIL 130
+++N V+ LD FT N V+ +V L G L+ L + ++ + QIL
Sbjct: 81 KHEN-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 137
Query: 131 KGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFE 190
+GL Y+H D++H DLK N+ V L I D G A +
Sbjct: 138 RGLKYIHS-ADIIHRDLKPSNLAVNEDCEL---------------KILDFGLARHTDDEM 181
Query: 191 FDYIQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEI 249
Y+ R +RA E++L + VDIWS CI +++TG LF P + ++ + +
Sbjct: 182 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRL 240
Query: 250 LGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSML 309
+G + L + E + N ++ ++ + + DL+ ML
Sbjct: 241 VG------TPGAELLKKISSESAR---NYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 291
Query: 310 HWDSDERFTAAQ 321
DSD+R TAAQ
Sbjct: 292 VLDSDKRITAAQ 303
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 135/312 (43%), Gaps = 42/312 (13%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHH 74
Y + +G G +V ++ +T VAVK + + +H R E++LLK H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HM 78
Query: 75 EYQNHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQIL 130
+++N V+ LD FT N V+ +V L G L+ L + ++ + QIL
Sbjct: 79 KHEN-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 131 KGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFE 190
+GL Y+H D++H DLK N+ V L I D G A +
Sbjct: 136 RGLKYIHS-ADIIHRDLKPSNLAVNEDCEL---------------KILDFGLARHTDDEM 179
Query: 191 FDYIQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEI 249
Y+ R +RA E++L + VDIWS CI +++TG LF P + ++ + +
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRL 238
Query: 250 LGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSML 309
+G + L + E + N ++ ++ + + DL+ ML
Sbjct: 239 VG------TPGAELLKKISSESAR---NYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 289
Query: 310 HWDSDERFTAAQ 321
DSD+R TAAQ
Sbjct: 290 VLDSDKRITAAQ 301
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 135/312 (43%), Gaps = 42/312 (13%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHH 74
Y + +G G +V ++ +T VAVK + + +H R E++LLK H
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HM 84
Query: 75 EYQNHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQIL 130
+++N V+ LD FT N V+ +V L G L+ L + ++ + QIL
Sbjct: 85 KHEN-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 141
Query: 131 KGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFE 190
+GL Y+H D++H DLK N+ V L I D G A +
Sbjct: 142 RGLKYIHS-ADIIHRDLKPSNLAVNEDCEL---------------KILDFGLARHTDDEM 185
Query: 191 FDYIQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEI 249
Y+ R +RA E++L + VDIWS CI +++TG LF P + ++ + +
Sbjct: 186 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRL 244
Query: 250 LGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSML 309
+G + L + E + N ++ ++ + + DL+ ML
Sbjct: 245 VG------TPGAELLKKISSESAR---NYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 295
Query: 310 HWDSDERFTAAQ 321
DSD+R TAAQ
Sbjct: 296 VLDSDKRITAAQ 307
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 134/309 (43%), Gaps = 42/309 (13%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHHEYQ 77
+ +G G +V ++ +T VAVK + + +H R E++LLK H +++
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HMKHE 81
Query: 78 NHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGL 133
N V+ LD FT N V+ +V L G L+ L + ++ + QIL+GL
Sbjct: 82 N-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 134 YYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDY 193
Y+H D++H DLK N+ V L I D G A + Y
Sbjct: 139 KYIHS-ADIIHRDLKPSNLAVNEDCEL---------------KILDFGLARHTDDEMTGY 182
Query: 194 IQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGD 252
+ R +RA E++L + VDIWS CI +++TG LF P + ++ + ++G
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVG- 240
Query: 253 IPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSMLHWD 312
+ L + E + N ++ ++ + + DL+ ML D
Sbjct: 241 -----TPGAELLKKISSESAR---NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 292
Query: 313 SDERFTAAQ 321
SD+R TAAQ
Sbjct: 293 SDKRITAAQ 301
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 135/312 (43%), Gaps = 42/312 (13%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHH 74
Y + +G G +V ++ +T VAVK + + +H R E++LLK H
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HM 84
Query: 75 EYQNHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQIL 130
+++N V+ LD FT N V+ +V L G L+ L + ++ + QIL
Sbjct: 85 KHEN-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 141
Query: 131 KGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFE 190
+GL Y+H D++H DLK N+ V L I D G A +
Sbjct: 142 RGLKYIHS-ADIIHRDLKPSNLAVNEDCEL---------------KILDFGLARHTDDEM 185
Query: 191 FDYIQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEI 249
Y+ R +RA E++L + VDIWS CI +++TG LF P + ++ + +
Sbjct: 186 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRL 244
Query: 250 LGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSML 309
+G + L + E + N ++ ++ + + DL+ ML
Sbjct: 245 VG------TPGAELLKKISSESAR---NYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 295
Query: 310 HWDSDERFTAAQ 321
DSD+R TAAQ
Sbjct: 296 VLDSDKRITAAQ 307
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 135/312 (43%), Gaps = 42/312 (13%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHH 74
Y + +G G +V ++ +T VAVK + + +H R E++LLK H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HM 78
Query: 75 EYQNHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQIL 130
+++N V+ LD FT N V+ +V L G L+ L + ++ + QIL
Sbjct: 79 KHEN-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 131 KGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFE 190
+GL Y+H D++H DLK N+ V L I D G A +
Sbjct: 136 RGLKYIHS-ADIIHRDLKPSNLAVNEDCEL---------------KILDAGLARHTDDEM 179
Query: 191 FDYIQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEI 249
Y+ R +RA E++L + VDIWS CI +++TG LF P + ++ + +
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRL 238
Query: 250 LGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSML 309
+G + L + E + N ++ ++ + + DL+ ML
Sbjct: 239 VG------TPGAELLKKISSESAR---NYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 289
Query: 310 HWDSDERFTAAQ 321
DSD+R TAAQ
Sbjct: 290 VLDSDKRITAAQ 301
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 135/312 (43%), Gaps = 42/312 (13%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHH 74
Y + +G G +V ++ +T VAVK + + +H R E++LLK H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HM 78
Query: 75 EYQNHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQIL 130
+++N V+ LD FT N V+ +V L G L+ L + ++ + QIL
Sbjct: 79 KHEN-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 131 KGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFE 190
+GL Y+H D++H DLK N+ V L I D G A +
Sbjct: 136 RGLKYIHS-ADIIHRDLKPSNLAVNEDCEL---------------KILDRGLARHTDDEM 179
Query: 191 FDYIQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEI 249
Y+ R +RA E++L + VDIWS CI +++TG LF P + ++ + +
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRL 238
Query: 250 LGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSML 309
+G + L + E + N ++ ++ + + DL+ ML
Sbjct: 239 VG------TPGAELLKKISSESAR---NYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 289
Query: 310 HWDSDERFTAAQ 321
DSD+R TAAQ
Sbjct: 290 VLDSDKRITAAQ 301
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 135/312 (43%), Gaps = 42/312 (13%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHH 74
Y + +G G +V ++ +T VAVK + + +H R E++LLK H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HM 78
Query: 75 EYQNHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQIL 130
+++N V+ LD FT N V+ +V L G L+ L + ++ + QIL
Sbjct: 79 KHEN-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 131 KGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFE 190
+GL Y+H D++H DLK N+ V L I D G A +
Sbjct: 136 RGLKYIHS-ADIIHRDLKPSNLAVNEDCEL---------------KILDYGLARHTDDEM 179
Query: 191 FDYIQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEI 249
Y+ R +RA E++L + VDIWS CI +++TG LF P + ++ + +
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRL 238
Query: 250 LGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSML 309
+G + L + E + N ++ ++ + + DL+ ML
Sbjct: 239 VG------TPGAELLKKISSESAR---NYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 289
Query: 310 HWDSDERFTAAQ 321
DSD+R TAAQ
Sbjct: 290 VLDSDKRITAAQ 301
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 134/309 (43%), Gaps = 42/309 (13%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHHEYQ 77
+ +G G +V ++ +T VAVK + + +H R E++LLK H +++
Sbjct: 23 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HMKHE 77
Query: 78 NHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGL 133
N V+ LD FT N V+ +V L G L+ L + ++ + QIL+GL
Sbjct: 78 N-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 134
Query: 134 YYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDY 193
Y+H D++H DLK N+ V L I D G A + +
Sbjct: 135 KYIHS-ADIIHRDLKPSNLAVNEDCEL---------------KILDFGLARHTDDEMAGF 178
Query: 194 IQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGD 252
+ R +RA E++L + VDIWS CI +++TG LF P + ++ + ++G
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVG- 236
Query: 253 IPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSMLHWD 312
+ L + E + N ++ ++ + + DL+ ML D
Sbjct: 237 -----TPGAELLKKISSESAR---NYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLD 288
Query: 313 SDERFTAAQ 321
SD+R TAAQ
Sbjct: 289 SDKRITAAQ 297
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 134/312 (42%), Gaps = 42/312 (13%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHH 74
Y + +G G +V ++ +T VAVK + + +H R E++LLK H
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HM 85
Query: 75 EYQNHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQIL 130
+++N V+ LD FT N V+ +V L G L+ L + ++ + QIL
Sbjct: 86 KHEN-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 142
Query: 131 KGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFE 190
+GL Y+H D++H DLK N+ V L I D G A
Sbjct: 143 RGLKYIHS-ADIIHRDLKPSNLAVNEDCEL---------------KILDFGLARHTADEM 186
Query: 191 FDYIQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEI 249
Y+ R +RA E++L + VDIWS CI +++TG LF P + ++ + +
Sbjct: 187 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRL 245
Query: 250 LGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSML 309
+G + L + E + N ++ ++ + + DL+ ML
Sbjct: 246 VG------TPGAELLKKISSESAR---NYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 296
Query: 310 HWDSDERFTAAQ 321
DSD+R TAAQ
Sbjct: 297 VLDSDKRITAAQ 308
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 134/312 (42%), Gaps = 42/312 (13%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHH 74
Y + +G G +V ++ +T VAVK + + +H R E++LLK H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HM 78
Query: 75 EYQNHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQIL 130
+++N V+ LD FT N V+ +V L G L+ L + ++ + QIL
Sbjct: 79 KHEN-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKSQKLTDDHVQFLIYQIL 135
Query: 131 KGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFE 190
+GL Y+H D++H DLK N+ V L I D G +
Sbjct: 136 RGLKYIHS-ADIIHRDLKPSNLAVNEDSEL---------------KILDFGLCRHTDDEM 179
Query: 191 FDYIQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEI 249
Y+ R +RA E++L + VDIWS CI +++TG LF P + ++ + +
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRL 238
Query: 250 LGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSML 309
+G + L + E + N ++ ++ + + DL+ ML
Sbjct: 239 VG------TPGAELLKKISSESAR---NYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 289
Query: 310 HWDSDERFTAAQ 321
DSD+R TAAQ
Sbjct: 290 VLDSDKRITAAQ 301
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 134/312 (42%), Gaps = 42/312 (13%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHH 74
Y + +G G +V ++ +T VAVK + + +H R E++LLK H
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HM 85
Query: 75 EYQNHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQIL 130
+++N V+ LD FT N V+ +V L G L+ L + ++ + QIL
Sbjct: 86 KHEN-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 142
Query: 131 KGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFE 190
+GL Y+H D++H DLK N+ V L I D G A
Sbjct: 143 RGLKYIHS-ADIIHRDLKPSNLAVNEDCEL---------------KILDFGLARHTADEM 186
Query: 191 FDYIQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEI 249
Y+ R +RA E++L + VDIWS CI +++TG LF P + ++ + +
Sbjct: 187 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRL 245
Query: 250 LGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSML 309
+G + L + E + N ++ ++ + + DL+ ML
Sbjct: 246 VG------TPGAELLKKISSESAR---NYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 296
Query: 310 HWDSDERFTAAQ 321
DSD+R TAAQ
Sbjct: 297 VLDSDKRITAAQ 308
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 135/312 (43%), Gaps = 42/312 (13%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHH 74
Y + +G G +V ++ +T VAVK + + +H R E++LLK H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HM 78
Query: 75 EYQNHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQIL 130
+++N V+ LD FT N V+ +V L G L+ L + ++ + QIL
Sbjct: 79 KHEN-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 131 KGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFE 190
+GL Y+H D++H DLK N+ V L I D G A +
Sbjct: 136 RGLKYIHS-ADIIHRDLKPSNLAVNEDCEL---------------KILDFGLARHTDDEM 179
Query: 191 FDYIQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEI 249
++ R +RA E++L + VDIWS CI +++TG LF P + ++ + +
Sbjct: 180 AGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRL 238
Query: 250 LGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSML 309
+G + L + E + N ++ ++ + + DL+ ML
Sbjct: 239 VG------TPGAELLKKISSESAR---NYIQSLAQMPKMNFANVFIGANPLAVDLLEKML 289
Query: 310 HWDSDERFTAAQ 321
DSD+R TAAQ
Sbjct: 290 VLDSDKRITAAQ 301
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 133/309 (43%), Gaps = 42/309 (13%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHHEYQ 77
+ +G G +V ++ +T VAVK + + +H R E++LLK H +++
Sbjct: 34 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HMKHE 88
Query: 78 NHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGL 133
N V+ LD FT N V+ +V L G L+ L + ++ + QIL+GL
Sbjct: 89 N-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 145
Query: 134 YYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDY 193
Y+H D++H DLK N+ V L I D G A Y
Sbjct: 146 KYIHS-ADIIHRDLKPSNLAVNEDCEL---------------KILDFGLARHTADEMTGY 189
Query: 194 IQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGD 252
+ R +RA E++L + VDIWS CI +++TG LF P + ++ + ++G
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVG- 247
Query: 253 IPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSMLHWD 312
+ L + E + N ++ ++ + + DL+ ML D
Sbjct: 248 -----TPGAELLKKISSESAR---NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 299
Query: 313 SDERFTAAQ 321
SD+R TAAQ
Sbjct: 300 SDKRITAAQ 308
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 135/312 (43%), Gaps = 42/312 (13%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHH 74
Y + +G G +V ++ +T VAVK + + +H R E++LLK H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HM 78
Query: 75 EYQNHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQIL 130
+++N V+ LD FT N V+ +V L G L+ L + ++ + QIL
Sbjct: 79 KHEN-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 131 KGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFE 190
+GL Y+H D++H DLK N+ V L I D G A +
Sbjct: 136 RGLKYIHS-ADIIHRDLKPSNLAVNEDCEL---------------KILDFGLARHTDDEM 179
Query: 191 FDYIQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEI 249
++ R +RA E++L + VDIWS CI +++TG LF P + ++ + +
Sbjct: 180 AGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRL 238
Query: 250 LGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSML 309
+G + L + E + N ++ ++ + + DL+ ML
Sbjct: 239 VG------TPGAELLKKISSESAR---NYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 289
Query: 310 HWDSDERFTAAQ 321
DSD+R TAAQ
Sbjct: 290 VLDSDKRITAAQ 301
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 135/312 (43%), Gaps = 42/312 (13%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHH 74
Y + +G G +V ++ +T VAVK + + +H R E++LLK H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HM 78
Query: 75 EYQNHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQIL 130
+++N V+ LD FT N V+ +V L G L+ L + ++ + QIL
Sbjct: 79 KHEN-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 131 KGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFE 190
+GL Y+H D++H DLK N+ V L I D G A +
Sbjct: 136 RGLKYIHS-ADIIHRDLKPSNLAVNEDCEL---------------KILDGGLARHTDDEM 179
Query: 191 FDYIQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEI 249
Y+ R +RA E++L + VDIWS CI +++TG LF P + ++ + +
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRL 238
Query: 250 LGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSML 309
+G + L + E + N ++ ++ + + DL+ ML
Sbjct: 239 VG------TPGAELLKKISSESAR---NYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 289
Query: 310 HWDSDERFTAAQ 321
DSD+R TAAQ
Sbjct: 290 VLDSDKRITAAQ 301
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 134/312 (42%), Gaps = 42/312 (13%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHH 74
Y + +G G +V ++ +T VAVK + + +H R E++LLK H
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HM 98
Query: 75 EYQNHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQIL 130
+++N V+ LD FT N V+ +V L G L+ L + ++ + QIL
Sbjct: 99 KHEN-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 155
Query: 131 KGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFE 190
+GL Y+H D++H DLK N+ V L I D G A +
Sbjct: 156 RGLKYIHS-ADIIHRDLKPSNLAVNEDCEL---------------KILDFGLARHTDDEM 199
Query: 191 FDYIQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEI 249
+ R +RA E++L + VDIWS CI +++TG LF P + ++ + +
Sbjct: 200 XGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRL 258
Query: 250 LGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSML 309
+G + L + E + N ++ ++ + + DL+ ML
Sbjct: 259 VG------TPGAELLKKISSESAR---NYIQSLAQMPKMNFANVFIGANPLAVDLLEKML 309
Query: 310 HWDSDERFTAAQ 321
DSD+R TAAQ
Sbjct: 310 VLDSDKRITAAQ 321
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 113/256 (44%), Gaps = 32/256 (12%)
Query: 5 YCALDIGD---TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR 60
+ +++IGD T++ Y ++ +G G V ++ VA+K + + H R
Sbjct: 10 FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKR 69
Query: 61 NEVQLLKITISNHHEYQNHVVKFLDHFTVLG--DNGVHACIVFELAGQTLSEFKSINYLN 118
+L+ + + NH +++ L+ FT + IV EL LS+ + L+
Sbjct: 70 AYRELVLMKVVNH----KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME-LD 124
Query: 119 MNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIA 178
M + Q+L G+ +LH ++H DLK NI+V + TL I
Sbjct: 125 HERMSYLLYQMLVGIKHLHS-AGIIHRDLKPSNIVVKSDATL---------------KIL 168
Query: 179 DLGYAYKNNAFEF---DYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDP 235
D G A + F Y+ R +RA EV+LG + VDIWS CI +M+ G LF P
Sbjct: 169 DFGLA-RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF-P 226
Query: 236 NLNDFQHIERMTEILG 251
+ ++ E LG
Sbjct: 227 GTDHIDQWNKVIEQLG 242
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 133/309 (43%), Gaps = 42/309 (13%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHHEYQ 77
+ +G G +V ++ +T VAVK + + +H R E++LLK H +++
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HMKHE 81
Query: 78 NHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGL 133
N V+ LD FT N V+ +V L G L+ L + ++ + QIL+GL
Sbjct: 82 N-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 134 YYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDY 193
Y+H D++H DLK N+ V L I D G A +
Sbjct: 139 KYIHS-ADIIHRDLKPSNLAVNEDCEL---------------KILDFGLARHTDDEMTGX 182
Query: 194 IQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGD 252
+ R +RA E++L + VDIWS CI +++TG LF P + ++ + ++G
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVG- 240
Query: 253 IPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSMLHWD 312
+ L + E + N ++ ++ + + DL+ ML D
Sbjct: 241 -----TPGAELLKKISSESAR---NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 292
Query: 313 SDERFTAAQ 321
SD+R TAAQ
Sbjct: 293 SDKRITAAQ 301
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 134/312 (42%), Gaps = 42/312 (13%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHH 74
Y + +G G +V ++ +T VAVK + + +H R E++LLK H
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HM 78
Query: 75 EYQNHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQIL 130
+++N V+ LD FT N V+ +V L G L+ L + ++ + QIL
Sbjct: 79 KHEN-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 131 KGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFE 190
+GL Y+H D++H DLK N+ V L I G A +
Sbjct: 136 RGLKYIHS-ADIIHRDLKPSNLAVNEDCEL---------------KILGFGLARHTDDEM 179
Query: 191 FDYIQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEI 249
Y+ R +RA E++L + VDIWS CI +++TG LF P + ++ + +
Sbjct: 180 TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRL 238
Query: 250 LGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSML 309
+G + L + E + N ++ ++ + + DL+ ML
Sbjct: 239 VG------TPGAELLKKISSESAR---NYIQSLTQMPKMNFANVFIGANPLAVDLLEKML 289
Query: 310 HWDSDERFTAAQ 321
DSD+R TAAQ
Sbjct: 290 VLDSDKRITAAQ 301
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 113/256 (44%), Gaps = 32/256 (12%)
Query: 5 YCALDIGD---TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR 60
+ +++IGD T++ Y ++ +G G V ++ VA+K + + H R
Sbjct: 10 FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKR 69
Query: 61 NEVQLLKITISNHHEYQNHVVKFLDHFTVLG--DNGVHACIVFELAGQTLSEFKSINYLN 118
+L+ + + NH +++ L+ FT + IV EL LS+ + L+
Sbjct: 70 AYRELVLMKVVNH----KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME-LD 124
Query: 119 MNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIA 178
M + Q+L G+ +LH ++H DLK NI+V + TL I
Sbjct: 125 HERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDATL---------------KIL 168
Query: 179 DLGYAYKNNAFEF---DYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDP 235
D G A + F Y+ R +RA EV+LG + VDIWS CI +M+ G LF P
Sbjct: 169 DFGLA-RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF-P 226
Query: 236 NLNDFQHIERMTEILG 251
+ ++ E LG
Sbjct: 227 GTDHIDQWNKVIEQLG 242
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 133/309 (43%), Gaps = 42/309 (13%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR--NEVQLLKITISNHHEYQ 77
+ +G G +V ++ +T VAVK + + +H R E++LLK H +++
Sbjct: 27 LSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLK-----HMKHE 81
Query: 78 NHVVKFLDHFTVLGD----NGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGL 133
N V+ LD FT N V+ +V L G L+ L + ++ + QIL+GL
Sbjct: 82 N-VIGLLDVFTPARSLEEFNDVY--LVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGL 138
Query: 134 YYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDY 193
Y+H D++H DLK N+ V L I D A + Y
Sbjct: 139 KYIHS-ADIIHRDLKPSNLAVNEDCEL---------------KILDFYLARHTDDEMTGY 182
Query: 194 IQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGD 252
+ R +RA E++L + VDIWS CI +++TG LF P + ++ + ++G
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLF-PGTDHIDQLKLILRLVG- 240
Query: 253 IPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSMLHWD 312
+ L + E + N ++ ++ + + DL+ ML D
Sbjct: 241 -----TPGAELLKKISSESAR---NYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 292
Query: 313 SDERFTAAQ 321
SD+R TAAQ
Sbjct: 293 SDKRITAAQ 301
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 135/325 (41%), Gaps = 38/325 (11%)
Query: 4 GYCALDIGDT---LISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITR 60
G+ D+ T L TY +G G +V C I+ S V + K + F
Sbjct: 9 GFYKQDVNKTAWELPKTYVSPTHVGSGAYGSV--CSAIDKRSGEKVAIKKLSRPFQSEIF 66
Query: 61 NEVQLLKITISNHHEYQNHVVKFLDHFTVLGD--NGVHACIVFELAGQTLSEFKSINYLN 118
+ ++ + H +++N V+ LD FT N +V L + + + +
Sbjct: 67 AKRAYRELLLLKHMQHEN-VIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKF-S 124
Query: 119 MNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIA 178
++ + Q+LKGL Y+H +VH DLK N+ V L I
Sbjct: 125 EEKIQYLVYQMLKGLKYIHS-AGVVHRDLKPGNLAVNEDCEL---------------KIL 168
Query: 179 DLGYAYKNNAFEFDYIQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNL 237
D G A +A Y+ R +RA EV+L + VDIWS CI +M+TG+ LF
Sbjct: 169 DFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK- 227
Query: 238 NDFQHIERMTEILGDIPDKVCNQSRLKAEFYDE-DGKLLSNNVEQISLTHHLQERGFSKS 296
+++++T+IL KV EF + + K + ++ + T
Sbjct: 228 ---DYLDQLTQIL-----KVTGVP--GTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPR 277
Query: 297 ESLTFSDLILSMLHWDSDERFTAAQ 321
S +DL+ ML D D+R TAAQ
Sbjct: 278 ASPQAADLLEKMLELDVDKRLTAAQ 302
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 135/325 (41%), Gaps = 38/325 (11%)
Query: 4 GYCALDIGDT---LISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITR 60
G+ D+ T L TY +G G +V C I+ S V + K + F
Sbjct: 27 GFYKQDVNKTAWELPKTYVSPTHVGSGAYGSV--CSAIDKRSGEKVAIKKLSRPFQSEIF 84
Query: 61 NEVQLLKITISNHHEYQNHVVKFLDHFTVLGD--NGVHACIVFELAGQTLSEFKSINYLN 118
+ ++ + H +++N V+ LD FT N +V L + + + +
Sbjct: 85 AKRAYRELLLLKHMQHEN-VIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEF-S 142
Query: 119 MNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIA 178
++ + Q+LKGL Y+H +VH DLK N+ V L I
Sbjct: 143 EEKIQYLVYQMLKGLKYIHS-AGVVHRDLKPGNLAVNEDCEL---------------KIL 186
Query: 179 DLGYAYKNNAFEFDYIQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNL 237
D G A +A Y+ R +RA EV+L + VDIWS CI +M+TG+ LF
Sbjct: 187 DFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK- 245
Query: 238 NDFQHIERMTEILGDIPDKVCNQSRLKAEFYDE-DGKLLSNNVEQISLTHHLQERGFSKS 296
+++++T+IL KV EF + + K + ++ + T
Sbjct: 246 ---DYLDQLTQIL-----KVTGVP--GTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPR 295
Query: 297 ESLTFSDLILSMLHWDSDERFTAAQ 321
S +DL+ ML D D+R TAAQ
Sbjct: 296 ASPQAADLLEKMLELDVDKRLTAAQ 320
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 139/325 (42%), Gaps = 58/325 (17%)
Query: 16 STYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMK-----GAPKFLHITRNEVQLLKITI 70
S + + KLG G +TV+ N T YVA+K +K G P + +I++
Sbjct: 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTP--------STAIREISL 56
Query: 71 SNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEF-------KSINYLNMNCMK 123
+++N +V+ D + +N + +VFE L ++ + L +N +K
Sbjct: 57 MKELKHEN-IVRLYD--VIHTENKL--TLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVK 111
Query: 124 DISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA 183
Q+L+GL + HE ++H DLK N+L+ L + D G A
Sbjct: 112 YFQWQLLQGLAFCHE-NKILHRDLKPQNLLINKRGQL---------------KLGDFGLA 155
Query: 184 Y----KNNAFEFDYIQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFDPNLN 238
N F + + +RA +V++G + +DIWS CI +M+TG+ LF P N
Sbjct: 156 RAFGIPVNTFSSEVVTLW-YRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLF-PGTN 213
Query: 239 DFQHIERMTEILGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSES 298
D + ++ + +I+G P++ S K Y+ N++Q Q E
Sbjct: 214 DEEQLKLIFDIMG-TPNESLWPSVTKLPKYNP-------NIQQRPPRDLRQVLQPHTKEP 265
Query: 299 L--TFSDLILSMLHWDSDERFTAAQ 321
L D + +L + D R +A Q
Sbjct: 266 LDGNLMDFLHGLLQLNPDMRLSAKQ 290
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 112/256 (43%), Gaps = 32/256 (12%)
Query: 5 YCALDIGD---TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR 60
+ +++IGD T++ Y ++ +G G V ++ VA+K + + H R
Sbjct: 10 FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKR 69
Query: 61 NEVQLLKITISNHHEYQNHVVKFLDHFTVLG--DNGVHACIVFELAGQTLSEFKSINYLN 118
+L+ + NH +++ L+ FT + IV EL LS+ + L+
Sbjct: 70 AYRELVLMKCVNH----KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME-LD 124
Query: 119 MNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIA 178
M + Q+L G+ +LH ++H DLK NI+V + TL I
Sbjct: 125 HERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDATL---------------KIL 168
Query: 179 DLGYAYKNNAFEF---DYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDP 235
D G A + F Y+ R +RA EV+LG + VDIWS CI +M+ G LF P
Sbjct: 169 DFGLA-RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF-P 226
Query: 236 NLNDFQHIERMTEILG 251
+ ++ E LG
Sbjct: 227 GTDHIDQWNKVIEQLG 242
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 109/251 (43%), Gaps = 17/251 (6%)
Query: 14 LISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNH 73
++ Y +++KLG G VW + T VAVK + A F + T + +I I
Sbjct: 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDA--FQNSTDAQRTFREIMILTE 64
Query: 74 HEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGL 133
++V L+ + DN +VF+ L N L + + Q++K +
Sbjct: 65 LSGHENIVNLLN--VLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVI 122
Query: 134 YYLHEVCDLVHTDLKHDNILVLTS---ETLGQKLALEVYEVLNTTNIADLGYAYKNNAFE 190
YLH L+H D+K NIL+ + L+ + TN L F+
Sbjct: 123 KYLHS-GGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFD 181
Query: 191 ------FDYIQAREFRAAEVVLGG-KLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHI 243
DY+ R +RA E++LG K K +D+WS CI +++ G+ +F P + +
Sbjct: 182 DDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIF-PGSSTMNQL 240
Query: 244 ERMTEILGDIP 254
ER+ ++ D P
Sbjct: 241 ERIIGVI-DFP 250
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 139/316 (43%), Gaps = 46/316 (14%)
Query: 16 STYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPK---FLHITRNEVQLLKITISN 72
+ Y ++ +G G V + T + VA+K + + F E++LLK
Sbjct: 25 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLK----- 79
Query: 73 HHEYQNHVVKFLDHFTV--LGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQIL 130
H ++N V+ LD FT D+ +V G L + L + ++ + Q+L
Sbjct: 80 HMRHEN-VIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQML 138
Query: 131 KGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFE 190
KGL Y+H ++H DLK N+ V L I D G A + ++
Sbjct: 139 KGLRYIH-AAGIIHRDLKPGNLAVNEDCEL---------------KILDFGLARQADSEM 182
Query: 191 FDYIQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEI 249
+ R +RA EV+L + + VDIWS CI +M+TG+ LF + H++++ EI
Sbjct: 183 XGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGS----DHLDQLKEI 238
Query: 250 LGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQ-ISLTHHLQERGFSK---SESLTFSDLI 305
+ KV AEF +L S+ + + L+++ F+ + S +L+
Sbjct: 239 M-----KVTGTP--PAEFVQ---RLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLL 288
Query: 306 LSMLHWDSDERFTAAQ 321
ML D+++R TA +
Sbjct: 289 EKMLVLDAEQRVTAGE 304
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 112/256 (43%), Gaps = 32/256 (12%)
Query: 5 YCALDIGD---TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR 60
+ +++IGD T++ Y ++ +G G V ++ VA+K + + H R
Sbjct: 10 FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKR 69
Query: 61 NEVQLLKITISNHHEYQNHVVKFLDHFTVLG--DNGVHACIVFELAGQTLSEFKSINYLN 118
+L+ + + NH +++ L+ FT + IV EL LS+ + L+
Sbjct: 70 AYRELVLMKVVNH----KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME-LD 124
Query: 119 MNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIA 178
M + Q+L G+ +LH ++H DLK NI+V + TL I
Sbjct: 125 HERMSYLLYQMLVGIKHLHS-AGIIHRDLKPSNIVVKSDATL---------------KIL 168
Query: 179 DLGYAYKNNAFEF---DYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDP 235
D G A + F Y+ R +RA EV+LG + VDIWS I +M+ G LF P
Sbjct: 169 DFGLA-RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLF-P 226
Query: 236 NLNDFQHIERMTEILG 251
+ ++ E LG
Sbjct: 227 GTDHIDQWNKVIEQLG 242
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 112/256 (43%), Gaps = 32/256 (12%)
Query: 5 YCALDIGD---TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR 60
+ +++IGD T++ Y ++ +G G V ++ VA+K + + H R
Sbjct: 10 FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKR 69
Query: 61 NEVQLLKITISNHHEYQNHVVKFLDHFTVLG--DNGVHACIVFELAGQTLSEFKSINYLN 118
+L+ + NH +++ L+ FT + IV EL LS+ + L+
Sbjct: 70 AYRELVLMKCVNH----KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME-LD 124
Query: 119 MNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIA 178
M + Q+L G+ +LH ++H DLK NI+V + TL I
Sbjct: 125 HERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTL---------------KIL 168
Query: 179 DLGYAYKNNAFEF---DYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDP 235
D G A + F Y+ R +RA EV+LG + VDIWS CI +M+ G LF P
Sbjct: 169 DFGLA-RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF-P 226
Query: 236 NLNDFQHIERMTEILG 251
+ ++ E LG
Sbjct: 227 GTDHIDQWNKVIEQLG 242
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 126/292 (43%), Gaps = 34/292 (11%)
Query: 8 LDIGDTLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLK 67
+ +GD Y K+G G S TV+ ++ T VA++ M + E+ + +
Sbjct: 13 VSVGDPK-KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN----LQQQPKKELIINE 67
Query: 68 ITISNHHEYQNHVVKFLDHFTVLGDNGVHACIVFE-LAGQTLSEFKSINYLNMNCMKDIS 126
I + ++ N +V +LD + V G +V E LAG +L++ + ++ + +
Sbjct: 68 ILVMRENKNPN-IVNYLDSYLV----GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVC 122
Query: 127 RQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK- 185
R+ L+ L +LH ++H D+K DNIL LG + + D G+ +
Sbjct: 123 RECLQALEFLHS-NQVIHRDIKSDNIL------LGMD---------GSVKLTDFGFCAQI 166
Query: 186 --NNAFEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHI 243
+ + + + A EVV G VDIWS + +M+ GE P LN+ +
Sbjct: 167 TPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE---PPYLNE-NPL 222
Query: 244 ERMTEILGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSK 295
+ I + ++ N +L A F D + L +VE+ L + F K
Sbjct: 223 RALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLK 274
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 112/256 (43%), Gaps = 32/256 (12%)
Query: 5 YCALDIGD---TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR 60
+ +++IGD T++ Y ++ +G G V ++ VA+K + + H R
Sbjct: 10 FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKR 69
Query: 61 NEVQLLKITISNHHEYQNHVVKFLDHFTVLG--DNGVHACIVFELAGQTLSEFKSINYLN 118
+L+ + + NH +++ L+ FT + IV EL LS+ + L+
Sbjct: 70 AYRELVLMKVVNH----KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME-LD 124
Query: 119 MNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIA 178
M + Q+L G+ +LH ++H DLK NI+V + TL I
Sbjct: 125 HERMSYLLYQMLVGIKHLHS-AGIIHRDLKPSNIVVKSDATL---------------KIL 168
Query: 179 DLGYAYKNNAFEF---DYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDP 235
D G A + F Y+ R +RA EV+LG + VDIWS I +M+ G LF P
Sbjct: 169 DFGLA-RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLF-P 226
Query: 236 NLNDFQHIERMTEILG 251
+ ++ E LG
Sbjct: 227 GTDHIDQWNKVIEQLG 242
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 133/311 (42%), Gaps = 53/311 (17%)
Query: 24 LGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVVKF 83
+G G V C N +T VA+K KFL + ++ + KI + + ++K
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIK------KFLE-SDDDKMVKKIAMR-----EIKLLKQ 80
Query: 84 LDHFTVLGDNGVHAC-------IVFELAGQTLSEFKSI--NYLNMNCMKDISRQILKGLY 134
L H ++ N + C +VFE T+ + + N L+ ++ QI+ G+
Sbjct: 81 LRHENLV--NLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIG 138
Query: 135 YLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNA---FEF 191
+ H +++H D+K +NILV S + D G+A A
Sbjct: 139 FCHS-HNIIHRDIKPENILVSQS---------------GVVKLCDFGFARTLAAPGEVYD 182
Query: 192 DYIQAREFRAAEVVLGG-KLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEIL 250
D + R +RA E+++G K GK VD+W+ C+ +M GE LF P +D + + L
Sbjct: 183 DEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLF-PGDSDIDQLYHIMMCL 241
Query: 251 GDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSMLH 310
G++ + E ++++ + +I L+ R SE + DL LH
Sbjct: 242 GNLIPR-------HQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVI--DLAKKCLH 292
Query: 311 WDSDERFTAAQ 321
D D+R A+
Sbjct: 293 IDPDKRPFCAE 303
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 109/246 (44%), Gaps = 30/246 (12%)
Query: 24 LGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVVKF 83
LG G STV L + TS A+K+++ K I N+V + + V+
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILE---KRHIIKENKVPYVT--------RERDVMSR 86
Query: 84 LDH-------FTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
LDH FT D ++ + + G+ L + I + C + + +I+ L YL
Sbjct: 87 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 146
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H ++H DLK +NIL L + + +++ + ++ + NAF +
Sbjct: 147 HGK-GIIHRDLKPENIL------LNEDMHIQITDFGTAKVLSPESKQARANAF----VGT 195
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
++ + E++ K D+W+ CI YQ+V G F N++ +++ ++ D P+K
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG-NEYLIFQKIIKLEYDFPEK 254
Query: 257 VCNQSR 262
++R
Sbjct: 255 FFPKAR 260
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 125/292 (42%), Gaps = 34/292 (11%)
Query: 8 LDIGDTLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLK 67
+ +GD Y K+G G S TV+ ++ T VA++ M + E+ + +
Sbjct: 13 VSVGDPK-KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN----LQQQPKKELIINE 67
Query: 68 ITISNHHEYQNHVVKFLDHFTVLGDNGVHACIVFE-LAGQTLSEFKSINYLNMNCMKDIS 126
I + ++ N +V +LD + V G +V E LAG +L++ + ++ + +
Sbjct: 68 ILVMRENKNPN-IVNYLDSYLV----GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVC 122
Query: 127 RQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK- 185
R+ L+ L +LH ++H D+K DNIL LG + + D G+ +
Sbjct: 123 RECLQALEFLHS-NQVIHRDIKSDNIL------LGMD---------GSVKLTDFGFCAQI 166
Query: 186 --NNAFEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHI 243
+ + + A EVV G VDIWS + +M+ GE P LN+ +
Sbjct: 167 TPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE---PPYLNE-NPL 222
Query: 244 ERMTEILGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSK 295
+ I + ++ N +L A F D + L +VE+ L + F K
Sbjct: 223 RALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLK 274
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 125/292 (42%), Gaps = 34/292 (11%)
Query: 8 LDIGDTLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLK 67
+ +GD Y K+G G S TV+ ++ T VA++ M + E+ + +
Sbjct: 13 VSVGDPK-KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN----LQQQPKKELIINE 67
Query: 68 ITISNHHEYQNHVVKFLDHFTVLGDNGVHACIVFE-LAGQTLSEFKSINYLNMNCMKDIS 126
I + ++ N +V +LD + V G +V E LAG +L++ + ++ + +
Sbjct: 68 ILVMRENKNPN-IVNYLDSYLV----GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVC 122
Query: 127 RQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK- 185
R+ L+ L +LH ++H D+K DNIL LG + + D G+ +
Sbjct: 123 RECLQALEFLHS-NQVIHRDIKSDNIL------LGMD---------GSVKLTDFGFCAQI 166
Query: 186 --NNAFEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHI 243
+ + + A EVV G VDIWS + +M+ GE P LN+ +
Sbjct: 167 TPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE---PPYLNE-NPL 222
Query: 244 ERMTEILGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSK 295
+ I + ++ N +L A F D + L +VE+ L + F K
Sbjct: 223 RALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLK 274
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 131/313 (41%), Gaps = 56/313 (17%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMK------GAPKFLHITRNEVQLLKITISNHH 74
+ K+G G V+ N T VA+K ++ G P E+ LLK NH
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS---TAIREISLLKEL--NH- 61
Query: 75 EYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEF---KSINYLNMNCMKDISRQILK 131
++VK LD + +N ++ +VFE Q L +F ++ + + +K Q+L+
Sbjct: 62 ---PNIVKLLD--VIHTENKLY--LVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEF 191
GL + H ++H DLK +N+L+ T +AD G A
Sbjct: 115 GLAFCHS-HRVLHRDLKPENLLINTE---------------GAIKLADFGLARAFGVPVR 158
Query: 192 DY---IQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMT 247
Y + +RA E++LG K VDIWS CI +MVT LF P ++ + R+
Sbjct: 159 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF-PGDSEIDQLFRIF 217
Query: 248 EILGDIPDKVCNQSRLKAEFYDED-GKLLSNNVEQISLTHHLQERGFSKSESLTFSDLIL 306
LG PD+V Y K + ++ L E G S L+
Sbjct: 218 RTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKV--VPPLDEDGRS---------LLS 265
Query: 307 SMLHWDSDERFTA 319
MLH+D ++R +A
Sbjct: 266 QMLHYDPNKRISA 278
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 125/292 (42%), Gaps = 34/292 (11%)
Query: 8 LDIGDTLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLK 67
+ +GD Y K+G G S TV+ ++ T VA++ M + E+ + +
Sbjct: 14 VSVGDPK-KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN----LQQQPKKELIINE 68
Query: 68 ITISNHHEYQNHVVKFLDHFTVLGDNGVHACIVFE-LAGQTLSEFKSINYLNMNCMKDIS 126
I + ++ N +V +LD + V G +V E LAG +L++ + ++ + +
Sbjct: 69 ILVMRENKNPN-IVNYLDSYLV----GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVC 123
Query: 127 RQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK- 185
R+ L+ L +LH ++H D+K DNIL LG + + D G+ +
Sbjct: 124 RECLQALEFLHS-NQVIHRDIKSDNIL------LGMD---------GSVKLTDFGFCAQI 167
Query: 186 --NNAFEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHI 243
+ + + A EVV G VDIWS + +M+ GE P LN+ +
Sbjct: 168 TPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE---PPYLNE-NPL 223
Query: 244 ERMTEILGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSK 295
+ I + ++ N +L A F D + L +VE+ L + F K
Sbjct: 224 RALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELIQHQFLK 275
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 131/313 (41%), Gaps = 56/313 (17%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMK------GAPKFLHITRNEVQLLKITISNHH 74
+ K+G G V+ N T VA+K ++ G P E+ LLK NH
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS---TAIREISLLKEL--NH- 62
Query: 75 EYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEF---KSINYLNMNCMKDISRQILK 131
++VK LD + +N ++ +VFE Q L +F ++ + + +K Q+L+
Sbjct: 63 ---PNIVKLLD--VIHTENKLY--LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 115
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEF 191
GL + H ++H DLK +N+L+ T +AD G A
Sbjct: 116 GLAFCHS-HRVLHRDLKPENLLINTE---------------GAIKLADFGLARAFGVPVR 159
Query: 192 DY---IQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMT 247
Y + +RA E++LG K VDIWS CI +MVT LF P ++ + R+
Sbjct: 160 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF-PGDSEIDQLFRIF 218
Query: 248 EILGDIPDKVCNQSRLKAEFYDED-GKLLSNNVEQISLTHHLQERGFSKSESLTFSDLIL 306
LG PD+V Y K + ++ L E G S L+
Sbjct: 219 RTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKV--VPPLDEDGRS---------LLS 266
Query: 307 SMLHWDSDERFTA 319
MLH+D ++R +A
Sbjct: 267 QMLHYDPNKRISA 279
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 131/313 (41%), Gaps = 56/313 (17%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMK------GAPKFLHITRNEVQLLKITISNHH 74
+ K+G G V+ N T VA+K ++ G P E+ LLK NH
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS---TAIREISLLKEL--NH- 63
Query: 75 EYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEF---KSINYLNMNCMKDISRQILK 131
++VK LD + +N ++ +VFE Q L +F ++ + + +K Q+L+
Sbjct: 64 ---PNIVKLLD--VIHTENKLY--LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 116
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEF 191
GL + H ++H DLK +N+L+ T +AD G A
Sbjct: 117 GLAFCHS-HRVLHRDLKPENLLINTE---------------GAIKLADFGLARAFGVPVR 160
Query: 192 DY---IQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMT 247
Y + +RA E++LG K VDIWS CI +MVT LF P ++ + R+
Sbjct: 161 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF-PGDSEIDQLFRIF 219
Query: 248 EILGDIPDKVCNQSRLKAEFYDED-GKLLSNNVEQISLTHHLQERGFSKSESLTFSDLIL 306
LG PD+V Y K + ++ L E G S L+
Sbjct: 220 RTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKV--VPPLDEDGRS---------LLS 267
Query: 307 SMLHWDSDERFTA 319
MLH+D ++R +A
Sbjct: 268 QMLHYDPNKRISA 280
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 130/313 (41%), Gaps = 56/313 (17%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMK------GAPKFLHITRNEVQLLKITISNHH 74
+ K+G G V+ N T VA+K ++ G P E+ LLK NH
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS---TAIREISLLKEL--NH- 61
Query: 75 EYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEF---KSINYLNMNCMKDISRQILK 131
++VK LD + +N ++ +VFE Q L +F ++ + + +K Q+L+
Sbjct: 62 ---PNIVKLLD--VIHTENKLY--LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEF 191
GL + H ++H DLK N+L+ T +AD G A
Sbjct: 115 GLAFCHS-HRVLHRDLKPQNLLINTE---------------GAIKLADFGLARAFGVPVR 158
Query: 192 DY---IQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMT 247
Y + +RA E++LG K VDIWS CI +MVT LF P ++ + R+
Sbjct: 159 TYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALF-PGDSEIDQLFRIF 217
Query: 248 EILGDIPDKVCNQSRLKAEFYDED-GKLLSNNVEQISLTHHLQERGFSKSESLTFSDLIL 306
LG PD+V Y K + ++ L E G S L+
Sbjct: 218 RTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKV--VPPLDEDGRS---------LLS 265
Query: 307 SMLHWDSDERFTA 319
MLH+D ++R +A
Sbjct: 266 QMLHYDPNKRISA 278
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 130/313 (41%), Gaps = 56/313 (17%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMK------GAPKFLHITRNEVQLLKITISNHH 74
+ K+G G V+ N T VA+K ++ G P E+ LLK NH
Sbjct: 15 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS---TAIREISLLKEL--NH- 68
Query: 75 EYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEF---KSINYLNMNCMKDISRQILK 131
++VK LD + +N ++ +VFE Q L +F ++ + + +K Q+L+
Sbjct: 69 ---PNIVKLLD--VIHTENKLY--LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 121
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEF 191
GL + H ++H DLK N+L+ T +AD G A
Sbjct: 122 GLAFCHS-HRVLHRDLKPQNLLINTE---------------GAIKLADFGLARAFGVPVR 165
Query: 192 DY---IQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMT 247
Y + +RA E++LG K VDIWS CI +MVT LF P ++ + R+
Sbjct: 166 TYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALF-PGDSEIDQLFRIF 224
Query: 248 EILGDIPDKVCNQSRLKAEFYDED-GKLLSNNVEQISLTHHLQERGFSKSESLTFSDLIL 306
LG PD+V Y K + ++ L E G S L+
Sbjct: 225 RTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKV--VPPLDEDGRS---------LLS 272
Query: 307 SMLHWDSDERFTA 319
MLH+D ++R +A
Sbjct: 273 QMLHYDPNKRISA 285
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 130/313 (41%), Gaps = 56/313 (17%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMK------GAPKFLHITRNEVQLLKITISNHH 74
+ K+G G V+ N T VA+K ++ G P E+ LLK NH
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS---TAIREISLLKEL--NH- 61
Query: 75 EYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEF---KSINYLNMNCMKDISRQILK 131
++VK LD + +N ++ +VFE Q L +F ++ + + +K Q+L+
Sbjct: 62 ---PNIVKLLD--VIHTENKLY--LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEF 191
GL + H ++H DLK N+L+ T +AD G A
Sbjct: 115 GLAFCHS-HRVLHRDLKPQNLLINTE---------------GAIKLADFGLARAFGVPVR 158
Query: 192 DY---IQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMT 247
Y + +RA E++LG K VDIWS CI +MVT LF P ++ + R+
Sbjct: 159 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF-PGDSEIDQLFRIF 217
Query: 248 EILGDIPDKVCNQSRLKAEFYDED-GKLLSNNVEQISLTHHLQERGFSKSESLTFSDLIL 306
LG PD+V Y K + ++ L E G S L+
Sbjct: 218 RTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKV--VPPLDEDGRS---------LLS 265
Query: 307 SMLHWDSDERFTA 319
MLH+D ++R +A
Sbjct: 266 QMLHYDPNKRISA 278
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 111/256 (43%), Gaps = 32/256 (12%)
Query: 5 YCALDIGD---TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR 60
+ +++IGD T++ Y ++ +G G V ++ VA+K + + H R
Sbjct: 11 FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKR 70
Query: 61 NEVQLLKITISNHHEYQNHVVKFLDHFTVLG--DNGVHACIVFELAGQTLSEFKSINYLN 118
+L+ + NH +++ L+ FT + IV EL L + + L+
Sbjct: 71 AYRELVLMKCVNH----KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-LD 125
Query: 119 MNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIA 178
M + Q+L G+ +LH ++H DLK NI+V + TL I
Sbjct: 126 HERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTL---------------KIL 169
Query: 179 DLGYAYKNNAFEF---DYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDP 235
D G A + F Y+ R +RA EV+LG + VDIWS CI +M+ G LF P
Sbjct: 170 DFGLA-RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF-P 227
Query: 236 NLNDFQHIERMTEILG 251
+ ++ E LG
Sbjct: 228 GTDHIDQWNKVIEQLG 243
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 111/256 (43%), Gaps = 32/256 (12%)
Query: 5 YCALDIGD---TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR 60
+ +++IGD T++ Y ++ +G G V ++ VA+K + + H R
Sbjct: 10 FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKR 69
Query: 61 NEVQLLKITISNHHEYQNHVVKFLDHFTVLG--DNGVHACIVFELAGQTLSEFKSINYLN 118
+L+ + NH +++ L+ FT + IV EL L + + L+
Sbjct: 70 AYRELVLMKCVNH----KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-LD 124
Query: 119 MNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIA 178
M + Q+L G+ +LH ++H DLK NI+V + TL I
Sbjct: 125 HERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTL---------------KIL 168
Query: 179 DLGYAYKNNAFEF---DYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDP 235
D G A + F Y+ R +RA EV+LG + VDIWS CI +M+ G LF P
Sbjct: 169 DFGLA-RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF-P 226
Query: 236 NLNDFQHIERMTEILG 251
+ ++ E LG
Sbjct: 227 GTDHIDQWNKVIEQLG 242
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 130/313 (41%), Gaps = 56/313 (17%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMK------GAPKFLHITRNEVQLLKITISNHH 74
+ K+G G V+ N T VA+K ++ G P E+ LLK NH
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS---TAIREISLLKEL--NH- 62
Query: 75 EYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEF---KSINYLNMNCMKDISRQILK 131
++VK LD + +N ++ +VFE Q L +F ++ + + +K Q+L+
Sbjct: 63 ---PNIVKLLD--VIHTENKLY--LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 115
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEF 191
GL + H ++H DLK N+L+ T +AD G A
Sbjct: 116 GLAFCHS-HRVLHRDLKPQNLLINTE---------------GAIKLADFGLARAFGVPVR 159
Query: 192 DY---IQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMT 247
Y + +RA E++LG K VDIWS CI +MVT LF P ++ + R+
Sbjct: 160 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF-PGDSEIDQLFRIF 218
Query: 248 EILGDIPDKVCNQSRLKAEFYDED-GKLLSNNVEQISLTHHLQERGFSKSESLTFSDLIL 306
LG PD+V Y K + ++ L E G S L+
Sbjct: 219 RTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKV--VPPLDEDGRS---------LLS 266
Query: 307 SMLHWDSDERFTA 319
MLH+D ++R +A
Sbjct: 267 QMLHYDPNKRISA 279
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 130/313 (41%), Gaps = 56/313 (17%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMK------GAPKFLHITRNEVQLLKITISNHH 74
+ K+G G V+ N T VA+K ++ G P E+ LLK NH
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS---TAIREISLLKEL--NH- 61
Query: 75 EYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEF---KSINYLNMNCMKDISRQILK 131
++VK LD + +N ++ +VFE Q L +F ++ + + +K Q+L+
Sbjct: 62 ---PNIVKLLD--VIHTENKLY--LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEF 191
GL + H ++H DLK N+L+ T +AD G A
Sbjct: 115 GLAFCHS-HRVLHRDLKPQNLLINTE---------------GAIKLADFGLARAFGVPVR 158
Query: 192 DY---IQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMT 247
Y + +RA E++LG K VDIWS CI +MVT LF P ++ + R+
Sbjct: 159 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF-PGDSEIDQLFRIF 217
Query: 248 EILGDIPDKVCNQSRLKAEFYDED-GKLLSNNVEQISLTHHLQERGFSKSESLTFSDLIL 306
LG PD+V Y K + ++ L E G S L+
Sbjct: 218 RTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKV--VPPLDEDGRS---------LLS 265
Query: 307 SMLHWDSDERFTA 319
MLH+D ++R +A
Sbjct: 266 QMLHYDPNKRISA 278
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 130/313 (41%), Gaps = 56/313 (17%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMK------GAPKFLHITRNEVQLLKITISNHH 74
+ K+G G V+ N T VA+K ++ G P E+ LLK NH
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS---TAIREISLLKEL--NH- 61
Query: 75 EYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEF---KSINYLNMNCMKDISRQILK 131
++VK LD + +N ++ +VFE Q L +F ++ + + +K Q+L+
Sbjct: 62 ---PNIVKLLD--VIHTENKLY--LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEF 191
GL + H ++H DLK N+L+ T +AD G A
Sbjct: 115 GLAFCHS-HRVLHRDLKPQNLLINTE---------------GAIKLADFGLARAFGVPVR 158
Query: 192 DY---IQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMT 247
Y + +RA E++LG K VDIWS CI +MVT LF P ++ + R+
Sbjct: 159 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF-PGDSEIDQLFRIF 217
Query: 248 EILGDIPDKVCNQSRLKAEFYDED-GKLLSNNVEQISLTHHLQERGFSKSESLTFSDLIL 306
LG PD+V Y K + ++ L E G S L+
Sbjct: 218 RTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKV--VPPLDEDGRS---------LLS 265
Query: 307 SMLHWDSDERFTA 319
MLH+D ++R +A
Sbjct: 266 QMLHYDPNKRISA 278
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 130/313 (41%), Gaps = 56/313 (17%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMK------GAPKFLHITRNEVQLLKITISNHH 74
+ K+G G V+ N T VA+K ++ G P E+ LLK NH
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS---TAIREISLLKEL--NH- 60
Query: 75 EYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEF---KSINYLNMNCMKDISRQILK 131
++VK LD + +N ++ +VFE Q L +F ++ + + +K Q+L+
Sbjct: 61 ---PNIVKLLD--VIHTENKLY--LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 113
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEF 191
GL + H ++H DLK N+L+ T +AD G A
Sbjct: 114 GLAFCHS-HRVLHRDLKPQNLLINTE---------------GAIKLADFGLARAFGVPVR 157
Query: 192 DY---IQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMT 247
Y + +RA E++LG K VDIWS CI +MVT LF P ++ + R+
Sbjct: 158 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF-PGDSEIDQLFRIF 216
Query: 248 EILGDIPDKVCNQSRLKAEFYDED-GKLLSNNVEQISLTHHLQERGFSKSESLTFSDLIL 306
LG PD+V Y K + ++ L E G S L+
Sbjct: 217 RTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKV--VPPLDEDGRS---------LLS 264
Query: 307 SMLHWDSDERFTA 319
MLH+D ++R +A
Sbjct: 265 QMLHYDPNKRISA 277
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 130/313 (41%), Gaps = 56/313 (17%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMK------GAPKFLHITRNEVQLLKITISNHH 74
+ K+G G V+ N T VA+K ++ G P E+ LLK NH
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS---TAIREISLLKEL--NH- 60
Query: 75 EYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEF---KSINYLNMNCMKDISRQILK 131
++VK LD + +N ++ +VFE Q L +F ++ + + +K Q+L+
Sbjct: 61 ---PNIVKLLD--VIHTENKLY--LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 113
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEF 191
GL + H ++H DLK N+L+ T +AD G A
Sbjct: 114 GLAFCHS-HRVLHRDLKPQNLLINTE---------------GAIKLADFGLARAFGVPVR 157
Query: 192 DY---IQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMT 247
Y + +RA E++LG K VDIWS CI +MVT LF P ++ + R+
Sbjct: 158 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF-PGDSEIDQLFRIF 216
Query: 248 EILGDIPDKVCNQSRLKAEFYDED-GKLLSNNVEQISLTHHLQERGFSKSESLTFSDLIL 306
LG PD+V Y K + ++ L E G S L+
Sbjct: 217 RTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKV--VPPLDEDGRS---------LLS 264
Query: 307 SMLHWDSDERFTA 319
MLH+D ++R +A
Sbjct: 265 QMLHYDPNKRISA 277
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 130/313 (41%), Gaps = 56/313 (17%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMK------GAPKFLHITRNEVQLLKITISNHH 74
+ K+G G V+ N T VA+K ++ G P E+ LLK NH
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS---TAIREISLLKEL--NH- 60
Query: 75 EYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEF---KSINYLNMNCMKDISRQILK 131
++VK LD + +N ++ +VFE Q L +F ++ + + +K Q+L+
Sbjct: 61 ---PNIVKLLD--VIHTENKLY--LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 113
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEF 191
GL + H ++H DLK N+L+ T +AD G A
Sbjct: 114 GLAFCHS-HRVLHRDLKPQNLLINTE---------------GAIKLADFGLARAFGVPVR 157
Query: 192 DY---IQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMT 247
Y + +RA E++LG K VDIWS CI +MVT LF P ++ + R+
Sbjct: 158 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF-PGDSEIDQLFRIF 216
Query: 248 EILGDIPDKVCNQSRLKAEFYDED-GKLLSNNVEQISLTHHLQERGFSKSESLTFSDLIL 306
LG PD+V Y K + ++ L E G S L+
Sbjct: 217 RTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKV--VPPLDEDGRS---------LLS 264
Query: 307 SMLHWDSDERFTA 319
MLH+D ++R +A
Sbjct: 265 QMLHYDPNKRISA 277
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 130/313 (41%), Gaps = 56/313 (17%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMK------GAPKFLHITRNEVQLLKITISNHH 74
+ K+G G V+ N T VA+K ++ G P E+ LLK NH
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS---TAIREISLLKEL--NH- 62
Query: 75 EYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEF---KSINYLNMNCMKDISRQILK 131
++VK LD + +N ++ +VFE Q L +F ++ + + +K Q+L+
Sbjct: 63 ---PNIVKLLD--VIHTENKLY--LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 115
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEF 191
GL + H ++H DLK N+L+ T +AD G A
Sbjct: 116 GLAFCHS-HRVLHRDLKPQNLLINTE---------------GAIKLADFGLARAFGVPVR 159
Query: 192 DY---IQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMT 247
Y + +RA E++LG K VDIWS CI +MVT LF P ++ + R+
Sbjct: 160 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF-PGDSEIDQLFRIF 218
Query: 248 EILGDIPDKVCNQSRLKAEFYDED-GKLLSNNVEQISLTHHLQERGFSKSESLTFSDLIL 306
LG PD+V Y K + ++ L E G S L+
Sbjct: 219 RTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKV--VPPLDEDGRS---------LLS 266
Query: 307 SMLHWDSDERFTA 319
MLH+D ++R +A
Sbjct: 267 QMLHYDPNKRISA 279
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 130/313 (41%), Gaps = 56/313 (17%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMK------GAPKFLHITRNEVQLLKITISNHH 74
+ K+G G V+ N T VA+K ++ G P E+ LLK NH
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS---TAIREISLLKEL--NH- 64
Query: 75 EYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEF---KSINYLNMNCMKDISRQILK 131
++VK LD + +N ++ +VFE Q L +F ++ + + +K Q+L+
Sbjct: 65 ---PNIVKLLD--VIHTENKLY--LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEF 191
GL + H ++H DLK N+L+ T +AD G A
Sbjct: 118 GLAFCHS-HRVLHRDLKPQNLLINTE---------------GAIKLADFGLARAFGVPVR 161
Query: 192 DY---IQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMT 247
Y + +RA E++LG K VDIWS CI +MVT LF P ++ + R+
Sbjct: 162 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF-PGDSEIDQLFRIF 220
Query: 248 EILGDIPDKVCNQSRLKAEFYDED-GKLLSNNVEQISLTHHLQERGFSKSESLTFSDLIL 306
LG PD+V Y K + ++ L E G S L+
Sbjct: 221 RTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKV--VPPLDEDGRS---------LLS 268
Query: 307 SMLHWDSDERFTA 319
MLH+D ++R +A
Sbjct: 269 QMLHYDPNKRISA 281
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 130/313 (41%), Gaps = 56/313 (17%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMK------GAPKFLHITRNEVQLLKITISNHH 74
+ K+G G V+ N T VA+K ++ G P E+ LLK NH
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS---TAIREISLLKEL--NH- 63
Query: 75 EYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEF---KSINYLNMNCMKDISRQILK 131
++VK LD + +N ++ +VFE Q L +F ++ + + +K Q+L+
Sbjct: 64 ---PNIVKLLD--VIHTENKLY--LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 116
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEF 191
GL + H ++H DLK N+L+ T +AD G A
Sbjct: 117 GLAFCHS-HRVLHRDLKPQNLLINTE---------------GAIKLADFGLARAFGVPVR 160
Query: 192 DY---IQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMT 247
Y + +RA E++LG K VDIWS CI +MVT LF P ++ + R+
Sbjct: 161 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF-PGDSEIDQLFRIF 219
Query: 248 EILGDIPDKVCNQSRLKAEFYDED-GKLLSNNVEQISLTHHLQERGFSKSESLTFSDLIL 306
LG PD+V Y K + ++ L E G S L+
Sbjct: 220 RTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKV--VPPLDEDGRS---------LLS 267
Query: 307 SMLHWDSDERFTA 319
MLH+D ++R +A
Sbjct: 268 QMLHYDPNKRISA 280
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 130/313 (41%), Gaps = 56/313 (17%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMK------GAPKFLHITRNEVQLLKITISNHH 74
+ K+G G V+ N T VA+K ++ G P E+ LLK NH
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS---TAIREISLLKEL--NH- 61
Query: 75 EYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEF---KSINYLNMNCMKDISRQILK 131
++VK LD + +N ++ +VFE Q L +F ++ + + +K Q+L+
Sbjct: 62 ---PNIVKLLD--VIHTENKLY--LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEF 191
GL + H ++H DLK N+L+ T +AD G A
Sbjct: 115 GLAFCHS-HRVLHRDLKPQNLLINTE---------------GAIKLADFGLARAFGVPVR 158
Query: 192 DY---IQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMT 247
Y + +RA E++LG K VDIWS CI +MVT LF P ++ + R+
Sbjct: 159 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF-PGDSEIDQLFRIF 217
Query: 248 EILGDIPDKVCNQSRLKAEFYDED-GKLLSNNVEQISLTHHLQERGFSKSESLTFSDLIL 306
LG PD+V Y K + ++ L E G S L+
Sbjct: 218 RTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKV--VPPLDEDGRS---------LLS 265
Query: 307 SMLHWDSDERFTA 319
MLH+D ++R +A
Sbjct: 266 QMLHYDPNKRISA 278
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 130/313 (41%), Gaps = 56/313 (17%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMK------GAPKFLHITRNEVQLLKITISNHH 74
+ K+G G V+ N T VA+K ++ G P E+ LLK NH
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS---TAIREISLLKEL--NH- 64
Query: 75 EYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEF---KSINYLNMNCMKDISRQILK 131
++VK LD + +N ++ +VFE Q L +F ++ + + +K Q+L+
Sbjct: 65 ---PNIVKLLD--VIHTENKLY--LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEF 191
GL + H ++H DLK N+L+ T +AD G A
Sbjct: 118 GLAFCHS-HRVLHRDLKPQNLLINTE---------------GAIKLADFGLARAFGVPVR 161
Query: 192 DY---IQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMT 247
Y + +RA E++LG K VDIWS CI +MVT LF P ++ + R+
Sbjct: 162 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF-PGDSEIDQLFRIF 220
Query: 248 EILGDIPDKVCNQSRLKAEFYDED-GKLLSNNVEQISLTHHLQERGFSKSESLTFSDLIL 306
LG PD+V Y K + ++ L E G S L+
Sbjct: 221 RTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKV--VPPLDEDGRS---------LLS 268
Query: 307 SMLHWDSDERFTA 319
MLH+D ++R +A
Sbjct: 269 QMLHYDPNKRISA 281
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 111/246 (45%), Gaps = 30/246 (12%)
Query: 24 LGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVVKF 83
LG G STV L + TS A+K+++ HI + E ++ +T + V+
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKR----HIIK-ENKVPYVT------RERDVMSR 85
Query: 84 LDH-------FTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
LDH FT D ++ + + G+ L + I + C + + +I+ L YL
Sbjct: 86 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 145
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H ++H DLK +NIL L + + +++ + ++ + N+F +
Sbjct: 146 HGK-GIIHRDLKPENIL------LNEDMHIQITDFGTAKVLSPESKQARANSF----VGT 194
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
++ + E++ K D+W+ CI YQ+V G F N++ +++ ++ D P+K
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG-NEYLIFQKIIKLEYDFPEK 253
Query: 257 VCNQSR 262
++R
Sbjct: 254 FFPKAR 259
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 130/313 (41%), Gaps = 56/313 (17%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMK------GAPKFLHITRNEVQLLKITISNHH 74
+ K+G G V+ N T VA+K ++ G P E+ LLK NH
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS---TAIREISLLKEL--NH- 62
Query: 75 EYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEF---KSINYLNMNCMKDISRQILK 131
++VK LD + +N ++ +VFE Q L +F ++ + + +K Q+L+
Sbjct: 63 ---PNIVKLLD--VIHTENKLY--LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 115
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEF 191
GL + H ++H DLK N+L+ T +AD G A
Sbjct: 116 GLAFCHS-HRVLHRDLKPQNLLINTE---------------GAIKLADFGLARAFGVPVR 159
Query: 192 DY---IQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMT 247
Y + +RA E++LG K VDIWS CI +MVT LF P ++ + R+
Sbjct: 160 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF-PGDSEIDQLFRIF 218
Query: 248 EILGDIPDKVCNQSRLKAEFYDED-GKLLSNNVEQISLTHHLQERGFSKSESLTFSDLIL 306
LG PD+V Y K + ++ L E G S L+
Sbjct: 219 RTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKV--VPPLDEDGRS---------LLS 266
Query: 307 SMLHWDSDERFTA 319
MLH+D ++R +A
Sbjct: 267 QMLHYDPNKRISA 279
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 130/313 (41%), Gaps = 56/313 (17%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMK------GAPKFLHITRNEVQLLKITISNHH 74
+ K+G G V+ N T VA+K ++ G P E+ LLK NH
Sbjct: 15 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS---TAIREISLLKEL--NH- 68
Query: 75 EYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEF---KSINYLNMNCMKDISRQILK 131
++VK LD + +N ++ +VFE Q L +F ++ + + +K Q+L+
Sbjct: 69 ---PNIVKLLD--VIHTENKLY--LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 121
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEF 191
GL + H ++H DLK N+L+ T +AD G A
Sbjct: 122 GLAFCHS-HRVLHRDLKPQNLLINTE---------------GAIKLADFGLARAFGVPVR 165
Query: 192 DY---IQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMT 247
Y + +RA E++LG K VDIWS CI +MVT LF P ++ + R+
Sbjct: 166 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF-PGDSEIDQLFRIF 224
Query: 248 EILGDIPDKVCNQSRLKAEFYDED-GKLLSNNVEQISLTHHLQERGFSKSESLTFSDLIL 306
LG PD+V Y K + ++ L E G S L+
Sbjct: 225 RTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKV--VPPLDEDGRS---------LLS 272
Query: 307 SMLHWDSDERFTA 319
MLH+D ++R +A
Sbjct: 273 QMLHYDPNKRISA 285
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 130/313 (41%), Gaps = 56/313 (17%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMK------GAPKFLHITRNEVQLLKITISNHH 74
+ K+G G V+ N T VA+K ++ G P E+ LLK NH
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS---TAIREISLLKEL--NH- 61
Query: 75 EYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEF---KSINYLNMNCMKDISRQILK 131
++VK LD + +N ++ +VFE Q L +F ++ + + +K Q+L+
Sbjct: 62 ---PNIVKLLD--VIHTENKLY--LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEF 191
GL + H ++H DLK N+L+ T +AD G A
Sbjct: 115 GLSFCHS-HRVLHRDLKPQNLLINTE---------------GAIKLADFGLARAFGVPVR 158
Query: 192 DY---IQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMT 247
Y + +RA E++LG K VDIWS CI +MVT LF P ++ + R+
Sbjct: 159 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF-PGDSEIDQLFRIF 217
Query: 248 EILGDIPDKVCNQSRLKAEFYDED-GKLLSNNVEQISLTHHLQERGFSKSESLTFSDLIL 306
LG PD+V Y K + ++ L E G S L+
Sbjct: 218 RTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKV--VPPLDEDGRS---------LLS 265
Query: 307 SMLHWDSDERFTA 319
MLH+D ++R +A
Sbjct: 266 QMLHYDPNKRISA 278
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 130/313 (41%), Gaps = 56/313 (17%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMK------GAPKFLHITRNEVQLLKITISNHH 74
+ K+G G V+ N T VA+K ++ G P E+ LLK NH
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS---TAIREISLLKEL--NH- 61
Query: 75 EYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEF---KSINYLNMNCMKDISRQILK 131
++VK LD + +N ++ +VFE Q L +F ++ + + +K Q+L+
Sbjct: 62 ---PNIVKLLD--VIHTENKLY--LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEF 191
GL + H ++H DLK N+L+ T +AD G A
Sbjct: 115 GLAFCHS-HRVLHRDLKPQNLLINTE---------------GAIKLADFGLARAFGVPVR 158
Query: 192 DY---IQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMT 247
Y + +RA E++LG K VDIWS CI +MVT LF P ++ + R+
Sbjct: 159 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF-PGDSEIDQLFRIF 217
Query: 248 EILGDIPDKVCNQSRLKAEFYDED-GKLLSNNVEQISLTHHLQERGFSKSESLTFSDLIL 306
LG PD+V Y K + ++ L E G S L+
Sbjct: 218 RTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKV--VPPLDEDGRS---------LLS 265
Query: 307 SMLHWDSDERFTA 319
MLH+D ++R +A
Sbjct: 266 QMLHYDPNKRISA 278
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 130/313 (41%), Gaps = 56/313 (17%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMK------GAPKFLHITRNEVQLLKITISNHH 74
+ K+G G V+ N T VA+K ++ G P E+ LLK NH
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS---TAIREISLLKEL--NH- 61
Query: 75 EYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEF---KSINYLNMNCMKDISRQILK 131
++VK LD + +N ++ +VFE Q L +F ++ + + +K Q+L+
Sbjct: 62 ---PNIVKLLD--VIHTENKLY--LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEF 191
GL + H ++H DLK N+L+ T +AD G A
Sbjct: 115 GLAFCHS-HRVLHRDLKPQNLLINTE---------------GAIKLADFGLARAFGVPVR 158
Query: 192 DY---IQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMT 247
Y + +RA E++LG K VDIWS CI +MVT LF P ++ + R+
Sbjct: 159 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF-PGDSEIDQLFRIF 217
Query: 248 EILGDIPDKVCNQSRLKAEFYDED-GKLLSNNVEQISLTHHLQERGFSKSESLTFSDLIL 306
LG PD+V Y K + ++ L E G S L+
Sbjct: 218 RTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKV--VPPLDEDGRS---------LLS 265
Query: 307 SMLHWDSDERFTA 319
MLH+D ++R +A
Sbjct: 266 QMLHYDPNKRISA 278
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 111/256 (43%), Gaps = 32/256 (12%)
Query: 5 YCALDIGD---TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR 60
+ +++IGD T++ Y ++ +G G V ++ VA+K + + H R
Sbjct: 10 FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKR 69
Query: 61 NEVQLLKITISNHHEYQNHVVKFLDHFTVLG--DNGVHACIVFELAGQTLSEFKSINYLN 118
+L+ + NH +++ L+ FT + IV EL L + + L+
Sbjct: 70 AYRELVLMKCVNH----KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-LD 124
Query: 119 MNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIA 178
M + Q+L G+ +LH ++H DLK NI+V + TL I
Sbjct: 125 HERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTL---------------KIL 168
Query: 179 DLGYAYKNNAFEF---DYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDP 235
D G A + F Y+ R +RA EV+LG + VDIWS CI +M+ G LF P
Sbjct: 169 DFGLA-RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF-P 226
Query: 236 NLNDFQHIERMTEILG 251
+ ++ E LG
Sbjct: 227 GTDHIDQWNKVIEQLG 242
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 130/313 (41%), Gaps = 56/313 (17%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMK------GAPKFLHITRNEVQLLKITISNHH 74
+ K+G G V+ N T VA+K ++ G P E+ LLK NH
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS---TAIREISLLKEL--NH- 60
Query: 75 EYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEF---KSINYLNMNCMKDISRQILK 131
++VK LD + +N ++ +VFE Q L +F ++ + + +K Q+L+
Sbjct: 61 ---PNIVKLLD--VIHTENKLY--LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 113
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEF 191
GL + H ++H DLK N+L+ T +AD G A
Sbjct: 114 GLAFCHS-HRVLHRDLKPQNLLINTE---------------GAIKLADFGLARAFGVPVR 157
Query: 192 DY---IQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMT 247
Y + +RA E++LG K VDIWS CI +MVT LF P ++ + R+
Sbjct: 158 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF-PGDSEIDQLFRIF 216
Query: 248 EILGDIPDKVCNQSRLKAEFYDED-GKLLSNNVEQISLTHHLQERGFSKSESLTFSDLIL 306
LG PD+V Y K + ++ L E G S L+
Sbjct: 217 RTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKV--VPPLDEDGRS---------LLS 264
Query: 307 SMLHWDSDERFTA 319
MLH+D ++R +A
Sbjct: 265 QMLHYDPNKRISA 277
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 109/246 (44%), Gaps = 30/246 (12%)
Query: 24 LGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVVKF 83
LG G STV L + TS A+K+++ K I N+V + + V+
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILE---KRHIIKENKVPYVT--------RERDVMSR 89
Query: 84 LDH-------FTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
LDH FT D ++ + + G+ L + I + C + + +I+ L YL
Sbjct: 90 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 149
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H ++H DLK +NIL L + + +++ + ++ + N+F +
Sbjct: 150 HGK-GIIHRDLKPENIL------LNEDMHIQITDFGTAKVLSPESKQARANSF----VGT 198
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
++ + E++ K D+W+ CI YQ+V G F N++ +++ ++ D P+K
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG-NEYLIFQKIIKLEYDFPEK 257
Query: 257 VCNQSR 262
++R
Sbjct: 258 FFPKAR 263
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 131/313 (41%), Gaps = 56/313 (17%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMK------GAPKFLHITRNEVQLLKITISNHH 74
+ K+G G V+ N T VA+K ++ G P E+ LLK NH
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS---TAIREISLLKEL--NH- 63
Query: 75 EYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEF---KSINYLNMNCMKDISRQILK 131
++VK LD + +N ++ +VFE Q L +F ++ + + +K Q+L+
Sbjct: 64 ---PNIVKLLD--VIHTENKLY--LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 116
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEF 191
GL + H ++H DLK N+L+ T + +AD G A
Sbjct: 117 GLAFCHS-HRVLHRDLKPQNLLINTEGAI---------------KLADFGLARAFGVPVR 160
Query: 192 DY---IQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMT 247
Y + +RA E++LG K VDIWS CI +MVT LF P ++ + R+
Sbjct: 161 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF-PGDSEIDQLFRIF 219
Query: 248 EILGDIPDKVCNQSRLKAEFYDED-GKLLSNNVEQISLTHHLQERGFSKSESLTFSDLIL 306
LG PD+V Y K + ++ L E G S L+
Sbjct: 220 RTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKV--VPPLDEDGRS---------LLS 267
Query: 307 SMLHWDSDERFTA 319
MLH+D ++R +A
Sbjct: 268 QMLHYDPNKRISA 280
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 130/313 (41%), Gaps = 56/313 (17%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMK------GAPKFLHITRNEVQLLKITISNHH 74
+ K+G G V+ N T VA+K ++ G P E+ LLK NH
Sbjct: 12 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS---TAIREISLLKEL--NH- 65
Query: 75 EYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEF---KSINYLNMNCMKDISRQILK 131
++VK LD + +N ++ +VFE Q L +F ++ + + +K Q+L+
Sbjct: 66 ---PNIVKLLD--VIHTENKLY--LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 118
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEF 191
GL + H ++H DLK N+L+ T +AD G A
Sbjct: 119 GLAFCHS-HRVLHRDLKPQNLLINTE---------------GAIKLADFGLARAFGVPVR 162
Query: 192 DY---IQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMT 247
Y + +RA E++LG K VDIWS CI +MVT LF P ++ + R+
Sbjct: 163 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF-PGDSEIDQLFRIF 221
Query: 248 EILGDIPDKVCNQSRLKAEFYDED-GKLLSNNVEQISLTHHLQERGFSKSESLTFSDLIL 306
LG PD+V Y K + ++ L E G S L+
Sbjct: 222 RTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKV--VPPLDEDGRS---------LLS 269
Query: 307 SMLHWDSDERFTA 319
MLH+D ++R +A
Sbjct: 270 QMLHYDPNKRISA 282
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 130/313 (41%), Gaps = 56/313 (17%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMK------GAPKFLHITRNEVQLLKITISNHH 74
+ K+G G V+ N T VA+K ++ G P E+ LLK NH
Sbjct: 12 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS---TAIREISLLKEL--NH- 65
Query: 75 EYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEF---KSINYLNMNCMKDISRQILK 131
++VK LD + +N ++ +VFE Q L +F ++ + + +K Q+L+
Sbjct: 66 ---PNIVKLLD--VIHTENKLY--LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 118
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEF 191
GL + H ++H DLK N+L+ T +AD G A
Sbjct: 119 GLAFCHS-HRVLHRDLKPQNLLINTE---------------GAIKLADFGLARAFGVPVR 162
Query: 192 DY---IQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMT 247
Y + +RA E++LG K VDIWS CI +MVT LF P ++ + R+
Sbjct: 163 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF-PGDSEIDQLFRIF 221
Query: 248 EILGDIPDKVCNQSRLKAEFYDED-GKLLSNNVEQISLTHHLQERGFSKSESLTFSDLIL 306
LG PD+V Y K + ++ L E G S L+
Sbjct: 222 RTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKV--VPPLDEDGRS---------LLS 269
Query: 307 SMLHWDSDERFTA 319
MLH+D ++R +A
Sbjct: 270 QMLHYDPNKRISA 282
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 130/313 (41%), Gaps = 56/313 (17%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMK------GAPKFLHITRNEVQLLKITISNHH 74
+ K+G G V+ N T VA+K ++ G P E+ LLK NH
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS---TAIREISLLKEL--NH- 62
Query: 75 EYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEF---KSINYLNMNCMKDISRQILK 131
++VK LD + +N ++ +VFE L +F ++ + + +K Q+L+
Sbjct: 63 ---PNIVKLLD--VIHTENKLY--LVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQ 115
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEF 191
GL + H ++H DLK +N+L+ T +AD G A
Sbjct: 116 GLAFCHS-HRVLHRDLKPENLLINTE---------------GAIKLADFGLARAFGVPVR 159
Query: 192 DY---IQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMT 247
Y + +RA E++LG K VDIWS CI +MVT LF P ++ + R+
Sbjct: 160 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF-PGDSEIDQLFRIF 218
Query: 248 EILGDIPDKVCNQSRLKAEFYDED-GKLLSNNVEQISLTHHLQERGFSKSESLTFSDLIL 306
LG PD+V Y K + ++ L E G S L+
Sbjct: 219 RTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKV--VPPLDEDGRS---------LLS 266
Query: 307 SMLHWDSDERFTA 319
MLH+D ++R +A
Sbjct: 267 QMLHYDPNKRISA 279
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 131/313 (41%), Gaps = 56/313 (17%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMK------GAPKFLHITRNEVQLLKITISNHH 74
+ K+G G V+ N T VA+K ++ G P E+ LLK NH
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS---TAIREISLLKEL--NH- 64
Query: 75 EYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEF---KSINYLNMNCMKDISRQILK 131
++VK LD + +N ++ +VFE Q L +F ++ + + +K Q+L+
Sbjct: 65 ---PNIVKLLD--VIHTENKLY--LVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEF 191
GL + H ++H DLK N+L+ T + +AD G A
Sbjct: 118 GLAFCHS-HRVLHRDLKPQNLLINTEGAI---------------KLADFGLARAFGVPVR 161
Query: 192 DY---IQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMT 247
Y + +RA E++LG K VDIWS CI +MVT LF P ++ + R+
Sbjct: 162 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF-PGDSEIDQLFRIF 220
Query: 248 EILGDIPDKVCNQSRLKAEFYDED-GKLLSNNVEQISLTHHLQERGFSKSESLTFSDLIL 306
LG PD+V Y K + ++ L E G S L+
Sbjct: 221 RTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKV--VPPLDEDGRS---------LLS 268
Query: 307 SMLHWDSDERFTA 319
MLH+D ++R +A
Sbjct: 269 QMLHYDPNKRISA 281
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 110/246 (44%), Gaps = 30/246 (12%)
Query: 24 LGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVVKF 83
LG G STV L + TS A+K+++ HI + E ++ +T + V+
Sbjct: 22 LGEGSFSTVVLARELATSREYAIKILEKR----HIIK-ENKVPYVT------RERDVMSR 70
Query: 84 LDH-------FTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
LDH FT D ++ + + G+ L + I + C + + +I+ L YL
Sbjct: 71 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 130
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H ++H DLK +NIL L + + +++ + ++ + N F +
Sbjct: 131 HGK-GIIHRDLKPENIL------LNEDMHIQITDFGTAKVLSPESKQARANXF----VGT 179
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
++ + E++ K D+W+ CI YQ+V G F N++ +++ ++ D P+K
Sbjct: 180 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG-NEYLIFQKIIKLEYDFPEK 238
Query: 257 VCNQSR 262
++R
Sbjct: 239 FFPKAR 244
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 130/313 (41%), Gaps = 56/313 (17%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMK------GAPKFLHITRNEVQLLKITISNHH 74
+ K+G G V+ N T VA+K ++ G P E+ LLK NH
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS---TAIREISLLKEL--NH- 64
Query: 75 EYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEF---KSINYLNMNCMKDISRQILK 131
++VK LD + +N ++ +VFE L +F ++ + + +K Q+L+
Sbjct: 65 ---PNIVKLLD--VIHTENKLY--LVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEF 191
GL + H ++H DLK +N+L+ T +AD G A
Sbjct: 118 GLAFCHS-HRVLHRDLKPENLLINTE---------------GAIKLADFGLARAFGVPVR 161
Query: 192 DY---IQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMT 247
Y + +RA E++LG K VDIWS CI +MVT LF P ++ + R+
Sbjct: 162 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF-PGDSEIDQLFRIF 220
Query: 248 EILGDIPDKVCNQSRLKAEFYDED-GKLLSNNVEQISLTHHLQERGFSKSESLTFSDLIL 306
LG PD+V Y K + ++ L E G S L+
Sbjct: 221 RTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKV--VPPLDEDGRS---------LLS 268
Query: 307 SMLHWDSDERFTA 319
MLH+D ++R +A
Sbjct: 269 QMLHYDPNKRISA 281
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 108/246 (43%), Gaps = 30/246 (12%)
Query: 24 LGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVVKF 83
LG G STV L + TS A+K+++ K I N+V + + V+
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILE---KRHIIKENKVPYVT--------RERDVMSR 88
Query: 84 LDH-------FTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
LDH FT D ++ + + G+ L + I + C + + +I+ L YL
Sbjct: 89 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 148
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H ++H DLK +NIL L + + +++ + ++ + N F +
Sbjct: 149 HGK-GIIHRDLKPENIL------LNEDMHIQITDFGTAKVLSPESKQARANXF----VGT 197
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
++ + E++ K D+W+ CI YQ+V G F N++ +++ ++ D P+K
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG-NEYLIFQKIIKLEYDFPEK 256
Query: 257 VCNQSR 262
++R
Sbjct: 257 FFPKAR 262
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 108/246 (43%), Gaps = 30/246 (12%)
Query: 24 LGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVVKF 83
LG G STV L + TS A+K+++ K I N+V + + V+
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILE---KRHIIKENKVPYVT--------RERDVMSR 88
Query: 84 LDH-------FTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
LDH FT D ++ + + G+ L + I + C + + +I+ L YL
Sbjct: 89 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 148
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H ++H DLK +NIL L + + +++ + ++ + N F +
Sbjct: 149 HGK-GIIHRDLKPENIL------LNEDMHIQITDFGTAKVLSPESKQARANXF----VGT 197
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
++ + E++ K D+W+ CI YQ+V G F N++ +++ ++ D P+K
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG-NEYLIFQKIIKLEYDFPEK 256
Query: 257 VCNQSR 262
++R
Sbjct: 257 FFPKAR 262
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 108/246 (43%), Gaps = 30/246 (12%)
Query: 24 LGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVVKF 83
LG G STV L + TS A+K+++ K I N+V + + V+
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILE---KRHIIKENKVPYVT--------RERDVMSR 86
Query: 84 LDH-------FTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
LDH FT D ++ + + G+ L + I + C + + +I+ L YL
Sbjct: 87 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 146
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H ++H DLK +NIL L + + +++ + ++ + N F +
Sbjct: 147 HGK-GIIHRDLKPENIL------LNEDMHIQITDFGTAKVLSPESKQARANXF----VGT 195
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
++ + E++ K D+W+ CI YQ+V G F N++ +++ ++ D P+K
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG-NEYLIFQKIIKLEYDFPEK 254
Query: 257 VCNQSR 262
++R
Sbjct: 255 FFPKAR 260
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 108/246 (43%), Gaps = 30/246 (12%)
Query: 24 LGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVVKF 83
LG G STV L + TS A+K+++ K I N+V + + V+
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILE---KRHIIKENKVPYVT--------RERDVMSR 88
Query: 84 LDH-------FTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
LDH FT D ++ + + G+ L + I + C + + +I+ L YL
Sbjct: 89 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 148
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H ++H DLK +NIL L + + +++ + ++ + N F +
Sbjct: 149 HGK-GIIHRDLKPENIL------LNEDMHIQITDFGTAKVLSPESKQARANXF----VGT 197
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
++ + E++ K D+W+ CI YQ+V G F N++ +++ ++ D P+K
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG-NEYLIFQKIIKLEYDFPEK 256
Query: 257 VCNQSR 262
++R
Sbjct: 257 FFPKAR 262
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 108/246 (43%), Gaps = 30/246 (12%)
Query: 24 LGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVVKF 83
LG G STV L + TS A+K+++ K I N+V + + V+
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILE---KRHIIKENKVPYVT--------RERDVMSR 89
Query: 84 LDH-------FTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
LDH FT D ++ + + G+ L + I + C + + +I+ L YL
Sbjct: 90 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 149
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H ++H DLK +NIL L + + +++ + ++ + N F +
Sbjct: 150 HGK-GIIHRDLKPENIL------LNEDMHIQITDFGTAKVLSPESKQARANXF----VGT 198
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
++ + E++ K D+W+ CI YQ+V G F N++ +++ ++ D P+K
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG-NEYLIFQKIIKLEYDFPEK 257
Query: 257 VCNQSR 262
++R
Sbjct: 258 FFPKAR 263
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 108/246 (43%), Gaps = 30/246 (12%)
Query: 24 LGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVVKF 83
LG G STV L + TS A+K+++ K I N+V + + V+
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILE---KRHIIKENKVPYVT--------RERDVMSR 86
Query: 84 LDH-------FTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
LDH FT D ++ + + G+ L + I + C + + +I+ L YL
Sbjct: 87 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 146
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H ++H DLK +NIL L + + +++ + ++ + N F +
Sbjct: 147 HGK-GIIHRDLKPENIL------LNEDMHIQITDFGTAKVLSPESKQARANXF----VGT 195
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
++ + E++ K D+W+ CI YQ+V G F N++ +++ ++ D P+K
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG-NEYLIFQKIIKLEYDFPEK 254
Query: 257 VCNQSR 262
++R
Sbjct: 255 FFPKAR 260
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 111/256 (43%), Gaps = 32/256 (12%)
Query: 5 YCALDIGD---TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR 60
+ ++++GD T++ Y ++ +G G V ++ VA+K + + H R
Sbjct: 10 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 69
Query: 61 NEVQLLKITISNHHEYQNHVVKFLDHFTVLG--DNGVHACIVFELAGQTLSEFKSINYLN 118
+L+ + NH +++ L+ FT + +V EL L + + L+
Sbjct: 70 AYRELVLMKXVNH----KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME-LD 124
Query: 119 MNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIA 178
M + Q+L G+ +LH ++H DLK NI+V + TL I
Sbjct: 125 HERMSYLLYQMLXGIKHLHS-AGIIHRDLKPSNIVVKSDXTL---------------KIL 168
Query: 179 DLGYAYKNNAFEF---DYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDP 235
D G A + F Y+ R +RA EV+LG + VDIWS CI +MV + LF P
Sbjct: 169 DFGLA-RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF-P 226
Query: 236 NLNDFQHIERMTEILG 251
+ ++ E LG
Sbjct: 227 GRDYIDQWNKVIEQLG 242
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 110/246 (44%), Gaps = 30/246 (12%)
Query: 24 LGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVVKF 83
LG G STV L + TS A+K+++ HI + E ++ +T + V+
Sbjct: 16 LGEGSFSTVVLARELATSREYAIKILEKR----HIIK-ENKVPYVT------RERDVMSR 64
Query: 84 LDH-------FTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
LDH FT D ++ + + G+ L + I + C + + +I+ L YL
Sbjct: 65 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 124
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H ++H DLK +NIL L + + +++ + ++ + N F +
Sbjct: 125 HGK-GIIHRDLKPENIL------LNEDMHIQITDFGTAKVLSPESKQARANXF----VGT 173
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
++ + E++ K D+W+ CI YQ+V G F N++ +++ ++ D P+K
Sbjct: 174 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG-NEYLIFQKIIKLEYDFPEK 232
Query: 257 VCNQSR 262
++R
Sbjct: 233 FFPKAR 238
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 110/246 (44%), Gaps = 30/246 (12%)
Query: 24 LGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVVKF 83
LG G STV L + TS A+K+++ HI + E ++ +T + V+
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKR----HIIK-ENKVPYVT------RERDVMSR 85
Query: 84 LDH-------FTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
LDH FT D ++ + + G+ L + I + C + + +I+ L YL
Sbjct: 86 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 145
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H ++H DLK +NIL L + + +++ + ++ + N F +
Sbjct: 146 HGK-GIIHRDLKPENIL------LNEDMHIQITDFGTAKVLSPESKQARANXF----VGT 194
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
++ + E++ K D+W+ CI YQ+V G F N++ +++ ++ D P+K
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG-NEYLIFQKIIKLEYDFPEK 253
Query: 257 VCNQSR 262
++R
Sbjct: 254 FFPKAR 259
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 129/313 (41%), Gaps = 56/313 (17%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMK------GAPKFLHITRNEVQLLKITISNHH 74
+ K+G G V+ N T VA+K ++ G P E+ LLK NH
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS---TAIREISLLKEL--NH- 64
Query: 75 EYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEF---KSINYLNMNCMKDISRQILK 131
++VK LD + +N ++ +VFE Q L F ++ + + +K Q+L+
Sbjct: 65 ---PNIVKLLD--VIHTENKLY--LVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEF 191
GL + H ++H DLK N+L+ T +AD G A
Sbjct: 118 GLAFCHS-HRVLHRDLKPQNLLINTE---------------GAIKLADFGLARAFGVPVR 161
Query: 192 DY---IQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMT 247
Y + +RA E++LG K VDIWS CI +MVT LF P ++ + R+
Sbjct: 162 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF-PGDSEIDQLFRIF 220
Query: 248 EILGDIPDKVCNQSRLKAEFYDED-GKLLSNNVEQISLTHHLQERGFSKSESLTFSDLIL 306
LG PD+V Y K + ++ L E G S L+
Sbjct: 221 RTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKV--VPPLDEDGRS---------LLS 268
Query: 307 SMLHWDSDERFTA 319
MLH+D ++R +A
Sbjct: 269 QMLHYDPNKRISA 281
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 110/246 (44%), Gaps = 30/246 (12%)
Query: 24 LGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVVKF 83
LG G STV L + TS A+K+++ HI + E ++ +T + V+
Sbjct: 17 LGEGSFSTVVLARELATSREYAIKILEKR----HIIK-ENKVPYVT------RERDVMSR 65
Query: 84 LDH-------FTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
LDH FT D ++ + + G+ L + I + C + + +I+ L YL
Sbjct: 66 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 125
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H ++H DLK +NIL L + + +++ + ++ + N F +
Sbjct: 126 HGK-GIIHRDLKPENIL------LNEDMHIQITDFGTAKVLSPESKQARANXF----VGT 174
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
++ + E++ K D+W+ CI YQ+V G F N++ +++ ++ D P+K
Sbjct: 175 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG-NEYLIFQKIIKLEYDFPEK 233
Query: 257 VCNQSR 262
++R
Sbjct: 234 FFPKAR 239
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 110/246 (44%), Gaps = 30/246 (12%)
Query: 24 LGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVVKF 83
LG G STV L + TS A+K+++ HI + E ++ +T + V+
Sbjct: 15 LGEGSFSTVVLARELATSREYAIKILEKR----HIIK-ENKVPYVT------RERDVMSR 63
Query: 84 LDH-------FTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
LDH FT D ++ + + G+ L + I + C + + +I+ L YL
Sbjct: 64 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 123
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H ++H DLK +NIL L + + +++ + ++ + N F +
Sbjct: 124 HGK-GIIHRDLKPENIL------LNEDMHIQITDFGTAKVLSPESKQARANXF----VGT 172
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
++ + E++ K D+W+ CI YQ+V G F N++ +++ ++ D P+K
Sbjct: 173 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG-NEYLIFQKIIKLEYDFPEK 231
Query: 257 VCNQSR 262
++R
Sbjct: 232 FFPKAR 237
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 110/246 (44%), Gaps = 30/246 (12%)
Query: 24 LGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVVKF 83
LG G STV L + TS A+K+++ HI + E ++ +T + V+
Sbjct: 18 LGEGSFSTVVLARELATSREYAIKILEKR----HIIK-ENKVPYVT------RERDVMSR 66
Query: 84 LDH-------FTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
LDH FT D ++ + + G+ L + I + C + + +I+ L YL
Sbjct: 67 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 126
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H ++H DLK +NIL L + + +++ + ++ + N F +
Sbjct: 127 HGK-GIIHRDLKPENIL------LNEDMHIQITDFGTAKVLSPESKQARANXF----VGT 175
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
++ + E++ K D+W+ CI YQ+V G F N++ +++ ++ D P+K
Sbjct: 176 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG-NEYLIFQKIIKLEYDFPEK 234
Query: 257 VCNQSR 262
++R
Sbjct: 235 FFPKAR 240
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 111/256 (43%), Gaps = 32/256 (12%)
Query: 5 YCALDIGD---TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR 60
+ ++++GD T++ Y ++ +G G V ++ VA+K + + H R
Sbjct: 10 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 69
Query: 61 NEVQLLKITISNHHEYQNHVVKFLDHFTVLG--DNGVHACIVFELAGQTLSEFKSINYLN 118
+L+ + NH +++ L+ FT + +V EL L + + L+
Sbjct: 70 AYRELVLMKCVNH----KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME-LD 124
Query: 119 MNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIA 178
M + Q+L G+ +LH ++H DLK NI+V + TL I
Sbjct: 125 HERMSYLLYQMLXGIKHLHS-AGIIHRDLKPSNIVVKSDXTL---------------KIL 168
Query: 179 DLGYAYKNNAFEF---DYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDP 235
D G A + F Y+ R +RA EV+LG + VDIWS CI +MV + LF P
Sbjct: 169 DFGLA-RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF-P 226
Query: 236 NLNDFQHIERMTEILG 251
+ ++ E LG
Sbjct: 227 GRDYIDQWNKVIEQLG 242
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 109/255 (42%), Gaps = 30/255 (11%)
Query: 5 YCALDIGD---TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR 60
+ +++IGD T++ Y ++ +G G V ++ VA+K + + H R
Sbjct: 12 FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKR 71
Query: 61 NEVQLLKITISNHHEYQNHVVKFLDHFTVLG--DNGVHACIVFELAGQTLSEFKSINYLN 118
+L+ + NH +++ L+ FT + IV EL L + + L+
Sbjct: 72 AYRELVLMKCVNH----KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-LD 126
Query: 119 MNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIA 178
M + Q+L G+ +LH ++H DLK NI+V + TL I
Sbjct: 127 HERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTL---------------KIL 170
Query: 179 DLGYAYKNNA--FEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPN 236
D G A ++ R +RA EV+LG + VDIWS CI +M+ G LF P
Sbjct: 171 DFGLARTAGTSFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF-PG 229
Query: 237 LNDFQHIERMTEILG 251
+ ++ E LG
Sbjct: 230 TDHIDQWNKVIEQLG 244
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 111/256 (43%), Gaps = 32/256 (12%)
Query: 5 YCALDIGD---TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR 60
+ ++++GD T++ Y ++ +G G V ++ VA+K + + H R
Sbjct: 3 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 62
Query: 61 NEVQLLKITISNHHEYQNHVVKFLDHFTVLG--DNGVHACIVFELAGQTLSEFKSINYLN 118
+L+ + NH +++ L+ FT + +V EL L + + L+
Sbjct: 63 AYRELVLMKCVNH----KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME-LD 117
Query: 119 MNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIA 178
M + Q+L G+ +LH ++H DLK NI+V + TL I
Sbjct: 118 HERMSYLLYQMLXGIKHLHS-AGIIHRDLKPSNIVVKSDXTL---------------KIL 161
Query: 179 DLGYAYKNNAFEF---DYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDP 235
D G A + F Y+ R +RA EV+LG + VDIWS CI +MV + LF P
Sbjct: 162 DFGLA-RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF-P 219
Query: 236 NLNDFQHIERMTEILG 251
+ ++ E LG
Sbjct: 220 GRDYIDQWNKVIEQLG 235
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 129/313 (41%), Gaps = 56/313 (17%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMK------GAPKFLHITRNEVQLLKITISNHH 74
+ K+G G V+ N T VA+K ++ G P E+ LLK NH
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS---TAIREISLLKEL--NH- 64
Query: 75 EYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEF---KSINYLNMNCMKDISRQILK 131
++VK LD + +N ++ +VFE L +F ++ + + +K Q+L+
Sbjct: 65 ---PNIVKLLD--VIHTENKLY--LVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEF 191
GL + H ++H DLK N+L+ T +AD G A
Sbjct: 118 GLAFCHS-HRVLHRDLKPQNLLINTE---------------GAIKLADFGLARAFGVPVR 161
Query: 192 DY---IQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMT 247
Y + +RA E++LG K VDIWS CI +MVT LF P ++ + R+
Sbjct: 162 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF-PGDSEIDQLFRIF 220
Query: 248 EILGDIPDKVCNQSRLKAEFYDED-GKLLSNNVEQISLTHHLQERGFSKSESLTFSDLIL 306
LG PD+V Y K + ++ L E G S L+
Sbjct: 221 RTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKV--VPPLDEDGRS---------LLS 268
Query: 307 SMLHWDSDERFTA 319
MLH+D ++R +A
Sbjct: 269 QMLHYDPNKRISA 281
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 125/292 (42%), Gaps = 34/292 (11%)
Query: 8 LDIGDTLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLK 67
+ +GD Y K+G G S TV+ ++ T VA++ M + E+ + +
Sbjct: 14 VSVGDPK-KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN----LQQQPKKELIINE 68
Query: 68 ITISNHHEYQNHVVKFLDHFTVLGDNGVHACIVFE-LAGQTLSEFKSINYLNMNCMKDIS 126
I + ++ N +V +LD + V G +V E LAG +L++ + ++ + +
Sbjct: 69 ILVMRENKNPN-IVNYLDSYLV----GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVC 123
Query: 127 RQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK- 185
R+ L+ L +LH ++H ++K DNIL LG + + D G+ +
Sbjct: 124 RECLQALEFLHS-NQVIHRNIKSDNIL------LGMD---------GSVKLTDFGFCAQI 167
Query: 186 --NNAFEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHI 243
+ + + A EVV G VDIWS + +M+ GE P LN+ +
Sbjct: 168 TPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE---PPYLNE-NPL 223
Query: 244 ERMTEILGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSK 295
+ I + ++ N +L A F D + L +VE+ L + F K
Sbjct: 224 RALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELIQHQFLK 275
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 129/313 (41%), Gaps = 56/313 (17%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMK------GAPKFLHITRNEVQLLKITISNHH 74
+ K+G G V+ N T VA+K ++ G P E+ LLK NH
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS---TAIREISLLKEL--NH- 63
Query: 75 EYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEF---KSINYLNMNCMKDISRQILK 131
++VK LD + +N ++ +VFE L +F ++ + + +K Q+L+
Sbjct: 64 ---PNIVKLLD--VIHTENKLY--LVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQ 116
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEF 191
GL + H ++H DLK N+L+ T +AD G A
Sbjct: 117 GLAFCHS-HRVLHRDLKPQNLLINTE---------------GAIKLADFGLARAFGVPVR 160
Query: 192 DY---IQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMT 247
Y + +RA E++LG K VDIWS CI +MVT LF P ++ + R+
Sbjct: 161 TYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF-PGDSEIDQLFRIF 219
Query: 248 EILGDIPDKVCNQSRLKAEFYDED-GKLLSNNVEQISLTHHLQERGFSKSESLTFSDLIL 306
LG PD+V Y K + ++ L E G S L+
Sbjct: 220 RTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKV--VPPLDEDGRS---------LLS 267
Query: 307 SMLHWDSDERFTA 319
MLH+D ++R +A
Sbjct: 268 QMLHYDPNKRISA 280
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 108/246 (43%), Gaps = 30/246 (12%)
Query: 24 LGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVVKF 83
LG G STV L + TS A+K+++ K I N+V + + V+
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILE---KRHIIKENKVPYVT--------RERDVMSR 88
Query: 84 LDH-------FTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
LDH FT D ++ + + G L + I + C + + +I+ L YL
Sbjct: 89 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYL 148
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H ++H DLK +NIL L + + +++ + ++ + N+F +
Sbjct: 149 HGK-GIIHRDLKPENIL------LNEDMHIQITDFGTAKVLSPESKQARANSF----VGT 197
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
++ + E++ K D+W+ CI YQ+V G F N++ +++ ++ D P+K
Sbjct: 198 AQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAG-NEYLIFQKIIKLEYDFPEK 256
Query: 257 VCNQSR 262
++R
Sbjct: 257 FFPKAR 262
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 96/221 (43%), Gaps = 35/221 (15%)
Query: 49 MKGAPKFLHITRNEVQ----------LLKITISNHHEYQNH--VVKFLDHFTV-LGDNGV 95
+K +F+ + R VQ + ++ + H E H VV+ D TV D
Sbjct: 33 LKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRET 92
Query: 96 HACIVFELAGQTLSEF---KSINYLNMNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNI 152
+VFE Q L+ + + +KD+ Q+L+GL +LH +VH DLK NI
Sbjct: 93 KLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS-HRVVHRDLKPQNI 151
Query: 153 LVLTSETLGQKLALEVYEVLNTTNIADLGYA--YKNNAFEFDYIQAREFRAAEVVLGGKL 210
LV +S GQ +AD G A Y + +RA EV+L
Sbjct: 152 LVTSS---GQ------------IKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSY 196
Query: 211 GKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILG 251
PVD+WS CI +M + LF + +D + ++ +++G
Sbjct: 197 ATPVDLWSVGCIFAEMFRRKPLFRGS-SDVDQLGKILDVIG 236
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 96/221 (43%), Gaps = 35/221 (15%)
Query: 49 MKGAPKFLHITRNEVQ----------LLKITISNHHEYQNH--VVKFLDHFTV-LGDNGV 95
+K +F+ + R VQ + ++ + H E H VV+ D TV D
Sbjct: 33 LKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRET 92
Query: 96 HACIVFELAGQTLSEF---KSINYLNMNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNI 152
+VFE Q L+ + + +KD+ Q+L+GL +LH +VH DLK NI
Sbjct: 93 KLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHS-HRVVHRDLKPQNI 151
Query: 153 LVLTSETLGQKLALEVYEVLNTTNIADLGYA--YKNNAFEFDYIQAREFRAAEVVLGGKL 210
LV +S GQ +AD G A Y + +RA EV+L
Sbjct: 152 LVTSS---GQ------------IKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSY 196
Query: 211 GKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILG 251
PVD+WS CI +M + LF + +D + ++ +++G
Sbjct: 197 ATPVDLWSVGCIFAEMFRRKPLFRGS-SDVDQLGKILDVIG 236
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 130/313 (41%), Gaps = 56/313 (17%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMK------GAPKFLHITRNEVQLLKITISNHH 74
+ K+G G V+ N T VA+K ++ G P E+ LLK NH
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPS---TAIREISLLKEL--NH- 60
Query: 75 EYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEF---KSINYLNMNCMKDISRQILK 131
++VK LD + +N ++ +VFE Q L F ++ + + +K Q+L+
Sbjct: 61 ---PNIVKLLD--VIHTENKLY--LVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQ 113
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEF 191
GL + H ++H DLK N+L+ T + +AD G A
Sbjct: 114 GLAFCHS-HRVLHRDLKPQNLLINTEGAI---------------KLADFGLARAFGVPVR 157
Query: 192 DY---IQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMT 247
Y + +RA E++LG K VDIWS CI +MVT LF P ++ + R+
Sbjct: 158 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF-PGDSEIDQLFRIF 216
Query: 248 EILGDIPDKVCNQSRLKAEFYDED-GKLLSNNVEQISLTHHLQERGFSKSESLTFSDLIL 306
LG PD+V Y K + ++ L E G S L+
Sbjct: 217 RTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKV--VPPLDEDGRS---------LLS 264
Query: 307 SMLHWDSDERFTA 319
MLH+D ++R +A
Sbjct: 265 QMLHYDPNKRISA 277
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 111/256 (43%), Gaps = 32/256 (12%)
Query: 5 YCALDIGD---TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR 60
+ ++++GD T++ Y ++ +G G V ++ VA+K + + H R
Sbjct: 10 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 69
Query: 61 NEVQLLKITISNHHEYQNHVVKFLDHFTVLG--DNGVHACIVFELAGQTLSEFKSINYLN 118
+L+ + NH +++ L+ FT + +V EL L + + L+
Sbjct: 70 AYRELVLMKXVNH----KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME-LD 124
Query: 119 MNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIA 178
M + Q+L G+ +LH ++H DLK NI+V + TL I
Sbjct: 125 HERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDXTL---------------KIL 168
Query: 179 DLGYAYKNNAFEF---DYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDP 235
D G A + F Y+ R +RA EV+LG + VDIWS CI +MV + LF P
Sbjct: 169 DFGLA-RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF-P 226
Query: 236 NLNDFQHIERMTEILG 251
+ ++ E LG
Sbjct: 227 GRDYIDQWNKVIEQLG 242
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 110/258 (42%), Gaps = 36/258 (13%)
Query: 4 GYCALDIGDTLISTYFIIRKLGWGFSSTVWLCWNIETSS-YVA---VKVMKGAPKFLHIT 59
G C D Y + ++G G V+ +++ +VA V+V G T
Sbjct: 5 GLCRAD------QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLST 58
Query: 60 RNEVQLLKITISNHHEYQNHVVKFLDHFTV-LGDNGVHACIVFELAGQTLSEF---KSIN 115
EV +L+ + H +VV+ D TV D +VFE Q L+ +
Sbjct: 59 IREVAVLRHLETFEHP---NVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEP 115
Query: 116 YLNMNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTT 175
+ +KD+ Q+L+GL +LH +VH DLK NILV +S GQ
Sbjct: 116 GVPTETIKDMMFQLLRGLDFLHS-HRVVHRDLKPQNILVTSS---GQ------------I 159
Query: 176 NIADLGYA--YKNNAFEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLF 233
+AD G A Y + +RA EV+L PVD+WS CI +M + LF
Sbjct: 160 KLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLF 219
Query: 234 DPNLNDFQHIERMTEILG 251
+ +D + ++ +++G
Sbjct: 220 RGS-SDVDQLGKILDVIG 236
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 132/322 (40%), Gaps = 51/322 (15%)
Query: 15 ISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRN-EVQLLKITISNH 73
+ + + R G G TV L T VA+K + P+F RN E+Q+++ H
Sbjct: 22 MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF----RNRELQIMQDLAVLH 77
Query: 74 HEYQNHVVKFLDHFTVLGDNG---VHACIVFELAGQTLSEFKSINYLNMNC------MKD 124
H ++V+ +F LG+ ++ +V E TL NY +K
Sbjct: 78 HP---NIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRC-CRNYYRRQVAPPPILIKV 133
Query: 125 ISRQILKGLYYLH-EVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA 183
Q+++ + LH ++ H D+K N+LV E T + D G A
Sbjct: 134 FLFQLIRSIGCLHLPSVNVCHRDIKPHNVLV--------------NEADGTLKLCDFGSA 179
Query: 184 YKNNAFEFD--YIQAREFRAAEVVLGGK-LGKPVDIWSTACITYQMVTGEYLFDPNLNDF 240
K + E + YI +R +RA E++ G + VDIWS CI +M+ GE +F + N
Sbjct: 180 KKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGD-NSA 238
Query: 241 QHIERMTEILGDIPDKV---CNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSE 297
+ + +LG +V N S + Y+ G SN SL +
Sbjct: 239 GQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSL-----------KD 287
Query: 298 SLTFSDLILSMLHWDSDERFTA 319
+ DL+ ++L + +ER
Sbjct: 288 AKEAYDLLSALLQYLPEERMKP 309
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 107/246 (43%), Gaps = 30/246 (12%)
Query: 24 LGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVVKF 83
LG G ST L + TS A+K+++ K I N+V + + V+
Sbjct: 38 LGEGSFSTTVLARELATSREYAIKILE---KRHIIKENKVPYVT--------RERDVMSR 86
Query: 84 LDH-------FTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
LDH FT D ++ + + G+ L + I + C + + +I+ L YL
Sbjct: 87 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 146
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H ++H DLK +NIL L + + +++ + ++ + N F +
Sbjct: 147 HGK-GIIHRDLKPENIL------LNEDMHIQITDFGTAKVLSPESKQARANXF----VGT 195
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
++ + E++ K D+W+ CI YQ+V G F N++ +++ ++ D P+K
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG-NEYLIFQKIIKLEYDFPEK 254
Query: 257 VCNQSR 262
++R
Sbjct: 255 FFPKAR 260
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 129/313 (41%), Gaps = 56/313 (17%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMK------GAPKFLHITRNEVQLLKITISNHH 74
+ K+G G V+ N T VA+ ++ G P E+ LLK NH
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPS---TAIREISLLKEL--NH- 61
Query: 75 EYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEF---KSINYLNMNCMKDISRQILK 131
++VK LD + +N ++ +VFE Q L +F ++ + + +K Q+L+
Sbjct: 62 ---PNIVKLLD--VIHTENKLY--LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 114
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEF 191
GL + H ++H DLK N+L+ T +AD G A
Sbjct: 115 GLAFCHS-HRVLHRDLKPQNLLINTE---------------GAIKLADFGLARAFGVPVR 158
Query: 192 DY---IQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMT 247
Y + +RA E++LG K VDIWS CI +MVT LF P ++ + R+
Sbjct: 159 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF-PGDSEIDQLFRIF 217
Query: 248 EILGDIPDKVCNQSRLKAEFYDED-GKLLSNNVEQISLTHHLQERGFSKSESLTFSDLIL 306
LG PD+V Y K + ++ L E G S L+
Sbjct: 218 RTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKV--VPPLDEDGRS---------LLS 265
Query: 307 SMLHWDSDERFTA 319
MLH+D ++R +A
Sbjct: 266 QMLHYDPNKRISA 278
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 129/313 (41%), Gaps = 56/313 (17%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMK------GAPKFLHITRNEVQLLKITISNHH 74
+ K+G G V+ N T VA+ ++ G P E+ LLK NH
Sbjct: 7 VEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPS---TAIREISLLKEL--NH- 60
Query: 75 EYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEF---KSINYLNMNCMKDISRQILK 131
++VK LD + +N ++ +VFE Q L +F ++ + + +K Q+L+
Sbjct: 61 ---PNIVKLLD--VIHTENKLY--LVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 113
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEF 191
GL + H ++H DLK N+L+ T +AD G A
Sbjct: 114 GLAFCHS-HRVLHRDLKPQNLLINTE---------------GAIKLADFGLARAFGVPVR 157
Query: 192 DY---IQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMT 247
Y + +RA E++LG K VDIWS CI +MVT LF P ++ + R+
Sbjct: 158 TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALF-PGDSEIDQLFRIF 216
Query: 248 EILGDIPDKVCNQSRLKAEFYDED-GKLLSNNVEQISLTHHLQERGFSKSESLTFSDLIL 306
LG PD+V Y K + ++ L E G S L+
Sbjct: 217 RTLG-TPDEVVWPGVTSMPDYKPSFPKWARQDFSKV--VPPLDEDGRS---------LLS 264
Query: 307 SMLHWDSDERFTA 319
MLH+D ++R +A
Sbjct: 265 QMLHYDPNKRISA 277
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 111/256 (43%), Gaps = 32/256 (12%)
Query: 5 YCALDIGD---TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR 60
+ ++++GD T++ Y ++ +G G V ++ VA+K + + H R
Sbjct: 10 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 69
Query: 61 NEVQLLKITISNHHEYQNHVVKFLDHFTVLG--DNGVHACIVFELAGQTLSEFKSINYLN 118
+L+ + NH +++ L+ FT + +V EL L + + L+
Sbjct: 70 AYRELVLMKXVNH----KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-LD 124
Query: 119 MNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIA 178
M + Q+L G+ +LH ++H DLK NI+V + TL I
Sbjct: 125 HERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDXTL---------------KIL 168
Query: 179 DLGYAYKNNAFEF---DYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDP 235
D G A + F Y+ R +RA EV+LG + VDIWS CI +MV + LF P
Sbjct: 169 DFGLA-RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF-P 226
Query: 236 NLNDFQHIERMTEILG 251
+ ++ E LG
Sbjct: 227 GRDYIDQWNKVIEQLG 242
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 107/246 (43%), Gaps = 30/246 (12%)
Query: 24 LGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVVKF 83
LG G STV L + TS A+K+++ K I N+V + + V+
Sbjct: 45 LGEGSFSTVVLARELATSREYAIKILE---KRHIIKENKVPYVT--------RERDVMSR 93
Query: 84 LDH-------FTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
LDH F D ++ + + G+ L + I + C + + +I+ L YL
Sbjct: 94 LDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 153
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H ++H DLK +NIL L + + +++ + ++ + N F +
Sbjct: 154 HGK-GIIHRDLKPENIL------LNEDMHIQITDFGTAKVLSPESKQARANXF----VGT 202
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
++ + E++ K D+W+ CI YQ+V G F N++ +++ ++ D P+K
Sbjct: 203 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG-NEYLIFQKIIKLEYDFPEK 261
Query: 257 VCNQSR 262
++R
Sbjct: 262 FFPKAR 267
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 103/243 (42%), Gaps = 33/243 (13%)
Query: 1 MHGGYCALDIGD---TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKF-- 55
M + ++ + D T++ Y ++ +G G V C +T + V V K + F
Sbjct: 4 MDSQFYSVQVADSTFTVLKRYQQLKPIGSGAQGIV--CAAFDTVLGINVAVKKLSRPFQN 61
Query: 56 -LHITRNEVQLLKITISNHHEYQNHVVKFLDHFTVLG--DNGVHACIVFELAGQTLSEFK 112
H R +L+ + NH +++ L+ FT + +V EL L +
Sbjct: 62 QTHAKRAYRELVLLKCVNH----KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI 117
Query: 113 SINYLNMNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVL 172
+ L+ M + Q+L G+ +LH ++H DLK NI+V + TL
Sbjct: 118 HME-LDHERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTL------------ 163
Query: 173 NTTNIADLGYAY--KNNAFEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGE 230
I D G A N Y+ R +RA EV+LG + VDIWS CI ++V G
Sbjct: 164 ---KILDFGLARTASTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGS 220
Query: 231 YLF 233
+F
Sbjct: 221 VIF 223
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 111/256 (43%), Gaps = 32/256 (12%)
Query: 5 YCALDIGD---TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR 60
+ ++++GD T++ Y ++ +G G V ++ VA+K + + H R
Sbjct: 11 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 70
Query: 61 NEVQLLKITISNHHEYQNHVVKFLDHFTVLG--DNGVHACIVFELAGQTLSEFKSINYLN 118
+L+ + NH +++ L+ FT + +V EL L + + L+
Sbjct: 71 AYRELVLMKCVNH----KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-LD 125
Query: 119 MNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIA 178
M + Q+L G+ +LH ++H DLK NI+V + TL I
Sbjct: 126 HERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTL---------------KIL 169
Query: 179 DLGYAYKNNAFEF---DYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDP 235
D G A + F Y+ R +RA EV+LG + VDIWS CI +MV + LF P
Sbjct: 170 DFGLA-RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF-P 227
Query: 236 NLNDFQHIERMTEILG 251
+ ++ E LG
Sbjct: 228 GRDYIDQWNKVIEQLG 243
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 110/254 (43%), Gaps = 32/254 (12%)
Query: 7 ALDIGD---TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITRNE 62
++++GD T++ Y ++ +G G V ++ VA+K + + H R
Sbjct: 50 SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY 109
Query: 63 VQLLKITISNHHEYQNHVVKFLDHFTVLG--DNGVHACIVFELAGQTLSEFKSINYLNMN 120
+L+ + NH +++ L+ FT + +V EL L + + L+
Sbjct: 110 RELVLMKCVNH----KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-LDHE 164
Query: 121 CMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADL 180
M + Q+L G+ +LH ++H DLK NI+V + TL I D
Sbjct: 165 RMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTL---------------KILDF 208
Query: 181 GYAYKNNAFEF---DYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNL 237
G A + F Y+ R +RA EV+LG + VDIWS CI +MV + LF P
Sbjct: 209 GLA-RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF-PGR 266
Query: 238 NDFQHIERMTEILG 251
+ ++ E LG
Sbjct: 267 DYIDQWNKVIEQLG 280
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 106/246 (43%), Gaps = 30/246 (12%)
Query: 24 LGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVVKF 83
LG G STV L + TS A+K+++ K I N+V + + V+
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILE---KRHIIKENKVPYVT--------RERDVMSR 88
Query: 84 LDH-------FTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
LDH FT D ++ + + G+ L + I + C + + +I+ L YL
Sbjct: 89 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 148
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H ++H DLK +NIL L + + +++ + ++ + N F +
Sbjct: 149 HGK-GIIHRDLKPENIL------LNEDMHIQITDFGTAKVLSPESKQARANXF----VGT 197
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
++ + E++ K D+W+ CI YQ+V G F N+ ++ ++ D P+K
Sbjct: 198 AQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAG-NEGLIFAKIIKLEYDFPEK 256
Query: 257 VCNQSR 262
++R
Sbjct: 257 FFPKAR 262
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 111/256 (43%), Gaps = 32/256 (12%)
Query: 5 YCALDIGD---TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR 60
+ ++++GD T++ Y ++ +G G V ++ VA+K + + H R
Sbjct: 10 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 69
Query: 61 NEVQLLKITISNHHEYQNHVVKFLDHFTVLG--DNGVHACIVFELAGQTLSEFKSINYLN 118
+L+ + NH +++ L+ FT + +V EL L + + L+
Sbjct: 70 AYRELVLMKCVNH----KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-LD 124
Query: 119 MNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIA 178
M + Q+L G+ +LH ++H DLK NI+V + TL I
Sbjct: 125 HERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTL---------------KIL 168
Query: 179 DLGYAYKNNAFEF---DYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDP 235
D G A + F Y+ R +RA EV+LG + VDIWS CI +MV + LF P
Sbjct: 169 DFGLA-RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF-P 226
Query: 236 NLNDFQHIERMTEILG 251
+ ++ E LG
Sbjct: 227 GRDYIDQWNKVIEQLG 242
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 111/256 (43%), Gaps = 32/256 (12%)
Query: 5 YCALDIGD---TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR 60
+ ++++GD T++ Y ++ +G G V ++ VA+K + + H R
Sbjct: 9 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 68
Query: 61 NEVQLLKITISNHHEYQNHVVKFLDHFTVLG--DNGVHACIVFELAGQTLSEFKSINYLN 118
+L+ + NH +++ L+ FT + +V EL L + + L+
Sbjct: 69 AYRELVLMKCVNH----KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-LD 123
Query: 119 MNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIA 178
M + Q+L G+ +LH ++H DLK NI+V + TL I
Sbjct: 124 HERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTL---------------KIL 167
Query: 179 DLGYAYKNNAFEF---DYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDP 235
D G A + F Y+ R +RA EV+LG + VDIWS CI +MV + LF P
Sbjct: 168 DFGLA-RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF-P 225
Query: 236 NLNDFQHIERMTEILG 251
+ ++ E LG
Sbjct: 226 GRDYIDQWNKVIEQLG 241
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 111/256 (43%), Gaps = 32/256 (12%)
Query: 5 YCALDIGD---TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR 60
+ ++++GD T++ Y ++ +G G V ++ VA+K + + H R
Sbjct: 11 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 70
Query: 61 NEVQLLKITISNHHEYQNHVVKFLDHFTVLG--DNGVHACIVFELAGQTLSEFKSINYLN 118
+L+ + NH +++ L+ FT + +V EL L + + L+
Sbjct: 71 AYRELVLMKCVNH----KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-LD 125
Query: 119 MNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIA 178
M + Q+L G+ +LH ++H DLK NI+V + TL I
Sbjct: 126 HERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTL---------------KIL 169
Query: 179 DLGYAYKNNAFEF---DYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDP 235
D G A + F Y+ R +RA EV+LG + VDIWS CI +MV + LF P
Sbjct: 170 DFGLA-RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF-P 227
Query: 236 NLNDFQHIERMTEILG 251
+ ++ E LG
Sbjct: 228 GRDYIDQWNKVIEQLG 243
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 111/256 (43%), Gaps = 32/256 (12%)
Query: 5 YCALDIGD---TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR 60
+ ++++GD T++ Y ++ +G G V ++ VA+K + + H R
Sbjct: 4 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 63
Query: 61 NEVQLLKITISNHHEYQNHVVKFLDHFTVLG--DNGVHACIVFELAGQTLSEFKSINYLN 118
+L+ + NH +++ L+ FT + +V EL L + + L+
Sbjct: 64 AYRELVLMKCVNH----KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-LD 118
Query: 119 MNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIA 178
M + Q+L G+ +LH ++H DLK NI+V + TL I
Sbjct: 119 HERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTL---------------KIL 162
Query: 179 DLGYAYKNNAFEF---DYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDP 235
D G A + F Y+ R +RA EV+LG + VDIWS CI +MV + LF P
Sbjct: 163 DFGLA-RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF-P 220
Query: 236 NLNDFQHIERMTEILG 251
+ ++ E LG
Sbjct: 221 GRDYIDQWNKVIEQLG 236
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 111/256 (43%), Gaps = 32/256 (12%)
Query: 5 YCALDIGD---TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR 60
+ ++++GD T++ Y ++ +G G V ++ VA+K + + H R
Sbjct: 3 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 62
Query: 61 NEVQLLKITISNHHEYQNHVVKFLDHFTVLG--DNGVHACIVFELAGQTLSEFKSINYLN 118
+L+ + NH +++ L+ FT + +V EL L + + L+
Sbjct: 63 AYRELVLMKCVNH----KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-LD 117
Query: 119 MNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIA 178
M + Q+L G+ +LH ++H DLK NI+V + TL I
Sbjct: 118 HERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTL---------------KIL 161
Query: 179 DLGYAYKNNAFEF---DYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDP 235
D G A + F Y+ R +RA EV+LG + VDIWS CI +MV + LF P
Sbjct: 162 DFGLA-RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF-P 219
Query: 236 NLNDFQHIERMTEILG 251
+ ++ E LG
Sbjct: 220 GRDYIDQWNKVIEQLG 235
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 110/256 (42%), Gaps = 32/256 (12%)
Query: 5 YCALDIGD---TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR 60
+ +++IGD T++ Y ++ +G G V ++ VA+K + + H R
Sbjct: 10 FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKR 69
Query: 61 NEVQLLKITISNHHEYQNHVVKFLDHFTVLG--DNGVHACIVFELAGQTLSEFKSINYLN 118
+L+ + NH +++ L+ FT + IV EL L + + L+
Sbjct: 70 AYRELVLMKCVNH----KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-LD 124
Query: 119 MNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIA 178
M + Q+L G+ +LH ++H DLK NI+V + TL I
Sbjct: 125 HERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTL---------------KIL 168
Query: 179 DLGYAYKNNAFEF---DYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDP 235
D G A + F + R +RA EV+LG + VDIWS CI +M+ G LF P
Sbjct: 169 DFGLA-RTAGTSFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLF-P 226
Query: 236 NLNDFQHIERMTEILG 251
+ ++ E LG
Sbjct: 227 GTDHIDQWNKVIEQLG 242
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 110/254 (43%), Gaps = 32/254 (12%)
Query: 7 ALDIGD---TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITRNE 62
+++IGD T++ Y ++ +G G V ++ VA+K + + H R
Sbjct: 6 SVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY 65
Query: 63 VQLLKITISNHHEYQNHVVKFLDHFTVLG--DNGVHACIVFELAGQTLSEFKSINYLNMN 120
+L+ + NH +++ L+ FT + IV EL L + + L+
Sbjct: 66 RELVLMKCVNH----KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-LDHE 120
Query: 121 CMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADL 180
M + Q+L G+ +LH ++H DLK NI+V + TL I D
Sbjct: 121 RMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTL---------------KILDF 164
Query: 181 GYAYKNNAFEF---DYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNL 237
G A + F Y+ R +RA EV+LG + VD+WS CI +MV + LF P
Sbjct: 165 GLA-RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILF-PGR 222
Query: 238 NDFQHIERMTEILG 251
+ ++ E LG
Sbjct: 223 DYIDQWNKVIEQLG 236
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 110/254 (43%), Gaps = 32/254 (12%)
Query: 7 ALDIGD---TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITRNE 62
+++IGD T++ Y ++ +G G V ++ VA+K + + H R
Sbjct: 17 SVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY 76
Query: 63 VQLLKITISNHHEYQNHVVKFLDHFTVLG--DNGVHACIVFELAGQTLSEFKSINYLNMN 120
+L+ + NH +++ L+ FT + IV EL L + + L+
Sbjct: 77 RELVLMKCVNH----KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-LDHE 131
Query: 121 CMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADL 180
M + Q+L G+ +LH ++H DLK NI+V + TL I D
Sbjct: 132 RMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTL---------------KILDF 175
Query: 181 GYAYKNNAFEF---DYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNL 237
G A + F Y+ R +RA EV+LG + VD+WS CI +MV + LF P
Sbjct: 176 GLA-RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILF-PGR 233
Query: 238 NDFQHIERMTEILG 251
+ ++ E LG
Sbjct: 234 DYIDQWNKVIEQLG 247
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 111/256 (43%), Gaps = 32/256 (12%)
Query: 5 YCALDIGD---TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR 60
+ ++++GD T++ Y ++ +G G V ++ VA+K + + H R
Sbjct: 10 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 69
Query: 61 NEVQLLKITISNHHEYQNHVVKFLDHFTVLG--DNGVHACIVFELAGQTLSEFKSINYLN 118
+L+ + NH +++ L+ FT + +V EL L + + L+
Sbjct: 70 AYRELVLMKCVNH----KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-LD 124
Query: 119 MNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIA 178
M + Q+L G+ +LH ++H DLK NI+V + TL I
Sbjct: 125 HERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTL---------------KIL 168
Query: 179 DLGYAYKNNAFEF---DYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDP 235
D G A + F Y+ R +RA EV+LG + VDIWS CI +MV + LF P
Sbjct: 169 DFGLA-RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF-P 226
Query: 236 NLNDFQHIERMTEILG 251
+ ++ E LG
Sbjct: 227 GRDYIDQWNKVIEQLG 242
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 110/254 (43%), Gaps = 32/254 (12%)
Query: 7 ALDIGD---TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITRNE 62
++++GD T++ Y ++ +G G V ++ VA+K + + H R
Sbjct: 50 SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY 109
Query: 63 VQLLKITISNHHEYQNHVVKFLDHFTVLG--DNGVHACIVFELAGQTLSEFKSINYLNMN 120
+L+ + NH +++ L+ FT + +V EL L + + L+
Sbjct: 110 RELVLMKCVNH----KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-LDHE 164
Query: 121 CMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADL 180
M + Q+L G+ +LH ++H DLK NI+V + TL I D
Sbjct: 165 RMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTL---------------KILDF 208
Query: 181 GYAYKNNAFEF---DYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNL 237
G A + F Y+ R +RA EV+LG + VDIWS CI +MV + LF P
Sbjct: 209 GLA-RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF-PGR 266
Query: 238 NDFQHIERMTEILG 251
+ ++ E LG
Sbjct: 267 DYIDQWNKVIEQLG 280
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 111/256 (43%), Gaps = 32/256 (12%)
Query: 5 YCALDIGD---TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITR 60
+ ++++GD T++ Y ++ +G G V ++ VA+K + + H R
Sbjct: 4 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 63
Query: 61 NEVQLLKITISNHHEYQNHVVKFLDHFTVLG--DNGVHACIVFELAGQTLSEFKSINYLN 118
+L+ + NH +++ L+ FT + +V EL L + + L+
Sbjct: 64 AYRELVLMKCVNH----KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME-LD 118
Query: 119 MNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIA 178
M + Q+L G+ +LH ++H DLK NI+V + TL I
Sbjct: 119 HERMSYLLYQMLCGIKHLHS-AGIIHRDLKPSNIVVKSDCTL---------------KIL 162
Query: 179 DLGYAYKNNAFEF---DYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDP 235
D G A + F Y+ R +RA EV+LG + VDIWS CI +MV + LF P
Sbjct: 163 DFGLA-RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF-P 220
Query: 236 NLNDFQHIERMTEILG 251
+ ++ E LG
Sbjct: 221 GRDYIDQWNKVIEQLG 236
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 121/262 (46%), Gaps = 32/262 (12%)
Query: 10 IGDTLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKIT 69
IG + Y I+ KLG G STV+L + + VA+K + F+ E L +
Sbjct: 5 IGKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAI-----FIPPREKEETLKRFE 59
Query: 70 ISNHHEYQ---NHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEF-KSINYLNMNCMKDI 125
H+ Q ++V +D V ++ + ++ + G TLSE+ +S L+++ +
Sbjct: 60 REVHNSSQLSHQNIVSMID---VDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINF 116
Query: 126 SRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK 185
+ QIL G+ + H++ +VH D+K NIL+ +++TL + + + L+ T++ +
Sbjct: 117 TNQILDGIKHAHDMR-IVHRDIKPQNILIDSNKTL-KIFDFGIAKALSETSLTQTNHV-- 172
Query: 186 NNAFEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLN---DFQH 242
+ ++ + E G + DI+S + Y+M+ GE F+ +H
Sbjct: 173 --------LGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKH 224
Query: 243 IER-----MTEILGDIPDKVCN 259
I+ T++ DIP + N
Sbjct: 225 IQDSVPNVTTDVRKDIPQSLSN 246
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 106/246 (43%), Gaps = 30/246 (12%)
Query: 24 LGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVVKF 83
LG G STV L + TS A+K+++ K I N+V + + V+
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILE---KRHIIKENKVPYVT--------RERDVMSR 88
Query: 84 LDH-------FTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
LDH FT D ++ + + G+ L + I + C + + +I+ L YL
Sbjct: 89 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 148
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H ++H DLK +NIL L + + +++ + ++ + N F +
Sbjct: 149 HGK-GIIHRDLKPENIL------LNEDMHIQITDFGTAKVLSPESKQARANXF----VGT 197
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
++ + E++ K D+W+ CI YQ+V G F N+ ++ ++ D P+K
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG-NEGLIFAKIIKLEYDFPEK 256
Query: 257 VCNQSR 262
++R
Sbjct: 257 FFPKAR 262
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 106/246 (43%), Gaps = 30/246 (12%)
Query: 24 LGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVVKF 83
LG G STV L + TS A+K+++ K I N+V + + V+
Sbjct: 43 LGEGSFSTVVLARELATSREYAIKILE---KRHIIKENKVPYVT--------RERDVMSR 91
Query: 84 LDH-------FTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
LDH FT D ++ + + G+ L + I + C + + +I+ L YL
Sbjct: 92 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 151
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H ++H DLK +NIL L + + +++ + ++ + N F +
Sbjct: 152 HGK-GIIHRDLKPENIL------LNEDMHIQITDFGTAKVLSPESKQARANXF----VGT 200
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
++ + E++ K D+W+ CI YQ+V G F N++ +++ ++ D P
Sbjct: 201 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG-NEYLIFQKIIKLEYDFPAA 259
Query: 257 VCNQSR 262
++R
Sbjct: 260 FFPKAR 265
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 102/242 (42%), Gaps = 45/242 (18%)
Query: 8 LDIGDTLI---STYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQ 64
LD+ D + Y + +G G S V C N ET AVK++ A KF +
Sbjct: 13 LDMADDDVLFEDVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVA-KFTSSPGLSTE 71
Query: 65 LLKITISNHHEYQN-HVVKFLDHFTVLGD--------NGVHACIVFEL-----AGQTLSE 110
LK S H ++ H+V+ L+ ++ G +G C FE+ AG SE
Sbjct: 72 DLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLC--FEIVKRADAGFVYSE 129
Query: 111 FKSINYLNMNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYE 170
+ +Y+ RQIL+ L Y H+ +++H D+K +N+L+ + E
Sbjct: 130 AVASHYM---------RQILEALRYCHD-NNIIHRDVKPENVLLASKENSA--------- 170
Query: 171 VLNTTNIADLGYAYK---NNAFEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMV 227
+ D G A + + + F A EVV GKPVD+W I + ++
Sbjct: 171 ---PVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILL 227
Query: 228 TG 229
+G
Sbjct: 228 SG 229
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 112/249 (44%), Gaps = 36/249 (14%)
Query: 14 LISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM---KGAPKFLHITRNEVQLLKITI 70
++ Y I K+G G V+ C N +T VA+K + P I E+++LK
Sbjct: 1 MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLK--- 57
Query: 71 SNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQT-LSEFKSINY-LNMNCMKDISRQ 128
++V L+ F +H +VFE T L E + + +K I+ Q
Sbjct: 58 ---QLKHPNLVNLLEVFR--RKRRLH--LVFEYCDHTVLHELDRYQRGVPEHLVKSITWQ 110
Query: 129 ILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAY---K 185
L+ + + H+ + +H D+K +NIL+ + + D G+A
Sbjct: 111 TLQAVNFCHK-HNCIHRDVKPENILITKHSVI---------------KLCDFGFARLLTG 154
Query: 186 NNAFEFDYIQAREFRAAEVVLGG-KLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIE 244
+ + D + R +R+ E+++G + G PVD+W+ C+ ++++G L+ P +D +
Sbjct: 155 PSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLW-PGKSDVDQLY 213
Query: 245 RMTEILGDI 253
+ + LGD+
Sbjct: 214 LIRKTLGDL 222
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 96/228 (42%), Gaps = 30/228 (13%)
Query: 13 TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKF---LHITRNEVQLLKIT 69
T++ Y ++ +G G V C +T + V V K + F H R +L+ +
Sbjct: 21 TVLKRYQQLKPIGSGAQGIV--CAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLK 78
Query: 70 ISNHHEYQNHVVKFLDHFTVLG--DNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISR 127
NH +++ L+ FT + +V EL L + + L+ M +
Sbjct: 79 CVNH----KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME-LDHERMSYLLY 133
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK-- 185
Q+L G+ +LH ++H DLK NI+V + TL I D G A
Sbjct: 134 QMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTL---------------KILDFGLARTAC 177
Query: 186 NNAFEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLF 233
N Y+ R +RA EV+LG VDIWS CI ++V G +F
Sbjct: 178 TNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIF 225
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 89/205 (43%), Gaps = 41/205 (20%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA---- 183
QIL+GL Y+H +++H DLK N+L+ T+ L I D G A
Sbjct: 134 QILRGLKYIHS-ANVLHRDLKPSNLLLNTTSDL---------------KICDFGLARVAD 177
Query: 184 --YKNNAFEFDYIQAREFRAAEVVLGGK-LGKPVDIWSTACITYQMVTGEYLFDPNLNDF 240
+ + F +Y+ R +RA E++L K K +DIWS CI +M++ +F P +
Sbjct: 178 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF-PGKHYL 236
Query: 241 QHIERMTEILGDIPDKVCNQS-RLKAEFYDEDGKLLSNNVEQISLTHHLQ---ERGFSKS 296
+ + ILG + N LKA Y +SL H + R F +
Sbjct: 237 DQLNHILGILGSPSQEDLNCGINLKARNY------------LLSLPHKNKVPWNRLFPNA 284
Query: 297 ESLTFSDLILSMLHWDSDERFTAAQ 321
+S DL+ ML ++ +R Q
Sbjct: 285 DSKAL-DLLDKMLTFNPHKRIEVEQ 308
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 110/253 (43%), Gaps = 30/253 (11%)
Query: 7 ALDIGD---TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITRNE 62
+++IGD T++ Y ++ +G G V ++ VA+K + + H R
Sbjct: 12 SVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY 71
Query: 63 VQLLKITISNHHEYQNHVVKFLDHFTVLG--DNGVHACIVFELAGQTLSEFKSINYLNMN 120
+L+ + NH +++ L+ FT + IV EL L + + L+
Sbjct: 72 RELVLMKCVNH----KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-LDHE 126
Query: 121 CMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADL 180
M + Q+L G+ +LH ++H DLK NI+V + TL I D
Sbjct: 127 RMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTL---------------KILDF 170
Query: 181 GYAY-KNNAFEFDY-IQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLN 238
G A +F + + R +RA EV+LG + VDIWS CI +MV + LF P +
Sbjct: 171 GLARTAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILF-PGRD 229
Query: 239 DFQHIERMTEILG 251
++ E LG
Sbjct: 230 YIDQWNKVIEQLG 242
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 32/227 (14%)
Query: 34 LCWNIETSSYVAVKVMKGAPKFLHIT--RNEVQLLKITISNHHEYQNHVVKFLDHFTVLG 91
+C + + V V + K +P F H T + ++ +KI + HE + + T+
Sbjct: 59 VCSAYDNVNKVRVAIKKISP-FEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 117
Query: 92 DNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYLHEVCDLVHTDLKHDN 151
V+ +V L G L + +L+ + + QIL+GL Y+H +++H DLK N
Sbjct: 118 MKDVY--LVTHLMGADLYKLLKTQHLSNDHICYFLYQILRGLKYIHS-ANVLHRDLKPSN 174
Query: 152 ILVLTSETLGQKLALEVYEVLNTTNIADLGYA------YKNNAFEFDYIQAREFRAAEVV 205
+L+ T+ L I D G A + + F +Y+ R +RA E++
Sbjct: 175 LLLNTTXDL---------------KICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 219
Query: 206 LGGK-LGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILG 251
L K K +DIWS CI +M++ +F +++++ ILG
Sbjct: 220 LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK----HYLDQLNHILG 262
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 89/205 (43%), Gaps = 41/205 (20%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA---- 183
QIL+GL Y+H +++H DLK N+L+ T+ L I D G A
Sbjct: 132 QILRGLKYIHS-ANVLHRDLKPSNLLLNTTXDL---------------KICDFGLARVAD 175
Query: 184 --YKNNAFEFDYIQAREFRAAEVVLGGK-LGKPVDIWSTACITYQMVTGEYLFDPNLNDF 240
+ + F +Y+ R +RA E++L K K +DIWS CI +M++ +F P +
Sbjct: 176 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF-PGKHYL 234
Query: 241 QHIERMTEILGDIPDKVCNQ-SRLKAEFYDEDGKLLSNNVEQISLTHHLQ---ERGFSKS 296
+ + ILG + N LKA Y +SL H + R F +
Sbjct: 235 DQLNHILGILGSPSQEDLNXIINLKARNY------------LLSLPHKNKVPWNRLFPNA 282
Query: 297 ESLTFSDLILSMLHWDSDERFTAAQ 321
+S DL+ ML ++ +R Q
Sbjct: 283 DSKAL-DLLDKMLTFNPHKRIEVEQ 306
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 89/205 (43%), Gaps = 41/205 (20%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA---- 183
QIL+GL Y+H +++H DLK N+L+ T+ L I D G A
Sbjct: 132 QILRGLKYIHS-ANVLHRDLKPSNLLLNTTXDL---------------KIXDFGLARVAD 175
Query: 184 --YKNNAFEFDYIQAREFRAAEVVLGGK-LGKPVDIWSTACITYQMVTGEYLFDPNLNDF 240
+ + F +Y+ R +RA E++L K K +DIWS CI +M++ +F P +
Sbjct: 176 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF-PGKHYL 234
Query: 241 QHIERMTEILGDIPDKVCNQ-SRLKAEFYDEDGKLLSNNVEQISLTHHLQ---ERGFSKS 296
+ + ILG + N LKA Y +SL H + R F +
Sbjct: 235 DQLNHILGILGSPSQEDLNXIINLKARNY------------LLSLPHKNKVPWNRLFPNA 282
Query: 297 ESLTFSDLILSMLHWDSDERFTAAQ 321
+S DL+ ML ++ +R Q
Sbjct: 283 DSKAL-DLLDKMLTFNPHKRIEVEQ 306
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 123/270 (45%), Gaps = 37/270 (13%)
Query: 24 LGWGFSSTVWLCWNIETSSYVAVK-VMKGAPKFLHITRNEVQLLKITISNHHEYQNHVVK 82
LG G V+ ++ +A+K + + ++ E+ L K H +++N +V+
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHK-----HLKHKN-IVQ 69
Query: 83 FLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYL----NMNCMKDISRQILKGLYYLHE 138
+L F+ +NG + ++ G +LS + N + ++QIL+GL YLH+
Sbjct: 70 YLGSFS---ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD 126
Query: 139 VCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQARE 198
+VH D+K DN+L+ T + L++ + + +A + N + +
Sbjct: 127 -NQIVHRDIKGDNVLINTYSGV-----LKISDFGTSKRLAGI------NPCTETFTGTLQ 174
Query: 199 FRAAEVVLGGK--LGKPVDIWSTACITYQMVTGEYLF----DPNLNDFQHIERMTEILGD 252
+ A E++ G GK DIWS C +M TG+ F +P F+ M ++ +
Sbjct: 175 YMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFK--VGMFKVHPE 232
Query: 253 IPDKVCNQSR---LKAEFYDEDGKLLSNNV 279
IP+ + +++ LK D D + +N++
Sbjct: 233 IPESMSAEAKAFILKCFEPDPDKRACANDL 262
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 64/131 (48%), Gaps = 27/131 (20%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA---- 183
QIL+GL Y+H +++H DLK N+L+ T+ L I D G A
Sbjct: 132 QILRGLKYIHS-ANVLHRDLKPSNLLLNTTXDL---------------KICDFGLARVAD 175
Query: 184 --YKNNAFEFDYIQAREFRAAEVVLGGK-LGKPVDIWSTACITYQMVTGEYLFDPNLNDF 240
+ + F +Y+ R +RA E++L K K +DIWS CI +M++ +F
Sbjct: 176 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK---- 231
Query: 241 QHIERMTEILG 251
+++++ ILG
Sbjct: 232 HYLDQLNHILG 242
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 64/131 (48%), Gaps = 27/131 (20%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA---- 183
QIL+GL Y+H +++H DLK N+L+ T+ L I D G A
Sbjct: 136 QILRGLKYIHS-ANVLHRDLKPSNLLLNTTXDL---------------KICDFGLARVAD 179
Query: 184 --YKNNAFEFDYIQAREFRAAEVVLGGK-LGKPVDIWSTACITYQMVTGEYLFDPNLNDF 240
+ + F +Y+ R +RA E++L K K +DIWS CI +M++ +F
Sbjct: 180 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK---- 235
Query: 241 QHIERMTEILG 251
+++++ ILG
Sbjct: 236 HYLDQLNHILG 246
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 64/131 (48%), Gaps = 27/131 (20%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA---- 183
QIL+GL Y+H +++H DLK N+L+ T+ L I D G A
Sbjct: 136 QILRGLKYIHS-ANVLHRDLKPSNLLLNTTXDL---------------KICDFGLARVAD 179
Query: 184 --YKNNAFEFDYIQAREFRAAEVVLGGK-LGKPVDIWSTACITYQMVTGEYLFDPNLNDF 240
+ + F +Y+ R +RA E++L K K +DIWS CI +M++ +F
Sbjct: 180 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK---- 235
Query: 241 QHIERMTEILG 251
+++++ ILG
Sbjct: 236 HYLDQLNHILG 246
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 110/253 (43%), Gaps = 30/253 (11%)
Query: 7 ALDIGD---TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVM-KGAPKFLHITRNE 62
+++IGD T++ Y ++ +G G V ++ VA+K + + H R
Sbjct: 12 SVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY 71
Query: 63 VQLLKITISNHHEYQNHVVKFLDHFTVLG--DNGVHACIVFELAGQTLSEFKSINYLNMN 120
+L+ + NH +++ L+ FT + IV EL L + + L+
Sbjct: 72 RELVLMKCVNH----KNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME-LDHE 126
Query: 121 CMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADL 180
M + Q+L G+ +LH ++H DLK NI+V + TL I D
Sbjct: 127 RMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKSDCTL---------------KILDF 170
Query: 181 GYAY-KNNAFEFDY-IQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLN 238
G A +F + + R +RA EV+LG + VD+WS CI +MV + LF P +
Sbjct: 171 GLARTAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILF-PGRD 229
Query: 239 DFQHIERMTEILG 251
++ E LG
Sbjct: 230 YIDQWNKVIEQLG 242
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 111/272 (40%), Gaps = 40/272 (14%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHV 80
IR LG G V L + ET ++ A+K++ + V+L +I + + +
Sbjct: 47 IRTLGTGSFGRVMLVKHKETGNHYAMKILD--------KQKVVKLKQIEHTLNEKRIQQA 98
Query: 81 VKFLD----HFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
V F F+ ++ ++ + + G+ S + I + + + QI+ YL
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 158
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H + DL++ DLK +N+L+ + +AD G+A + +
Sbjct: 159 HSL-DLIYRDLKPENLLI---------------DQQGYIKVADFGFAKRVKGRTWXLCGT 202
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
E+ A E++L K VD W+ + Y+M G + P D Q I+ +I
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---YPPFFAD-QPIQIYEKI------- 251
Query: 257 VCNQSRLKAEFYDEDGKLLSNNVEQISLTHHL 288
V + R + F D K L N+ Q+ LT
Sbjct: 252 VSGKVRFPSHF-SSDLKDLLRNLLQVDLTKRF 282
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 123/270 (45%), Gaps = 37/270 (13%)
Query: 24 LGWGFSSTVWLCWNIETSSYVAVK-VMKGAPKFLHITRNEVQLLKITISNHHEYQNHVVK 82
LG G V+ ++ +A+K + + ++ E+ L K H +++N +V+
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHK-----HLKHKN-IVQ 83
Query: 83 FLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYL----NMNCMKDISRQILKGLYYLHE 138
+L F+ +NG + ++ G +LS + N + ++QIL+GL YLH+
Sbjct: 84 YLGSFS---ENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD 140
Query: 139 VCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQARE 198
+VH D+K DN+L+ T + L++ + + +A + N + +
Sbjct: 141 -NQIVHRDIKGDNVLINTYSGV-----LKISDFGTSKRLAGI------NPCTETFTGTLQ 188
Query: 199 FRAAEVVLGGK--LGKPVDIWSTACITYQMVTGEYLF----DPNLNDFQHIERMTEILGD 252
+ A E++ G GK DIWS C +M TG+ F +P F+ M ++ +
Sbjct: 189 YMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFK--VGMFKVHPE 246
Query: 253 IPDKVCNQSR---LKAEFYDEDGKLLSNNV 279
IP+ + +++ LK D D + +N++
Sbjct: 247 IPESMSAEAKAFILKCFEPDPDKRACANDL 276
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 108/254 (42%), Gaps = 33/254 (12%)
Query: 8 LDIGDTLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLK 67
D+GD Y II +G G V T VA+K + A F +T + L +
Sbjct: 50 FDVGDE----YEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNA--FDVVTNAKRTLRE 103
Query: 68 ITISNHHEYQNHV-VKFLDHFTVLGDNGVHACIVFELAGQTLSEF-KSINYLNMNCMKDI 125
+ I H ++ N + +K + TV +V +L L + S L + ++
Sbjct: 104 LKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYF 163
Query: 126 SRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAY- 184
Q+L+GL Y+H ++H DLK N+LV + L I D G A
Sbjct: 164 LYQLLRGLKYMHS-AQVIHRDLKPSNLLVNENCEL---------------KIGDFGMARG 207
Query: 185 ------KNNAFEFDYIQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNL 237
++ F +Y+ R +RA E++L + + +D+WS CI +M+ LF P
Sbjct: 208 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLF-PGK 266
Query: 238 NDFQHIERMTEILG 251
N ++ + +LG
Sbjct: 267 NYVHQLQLIMMVLG 280
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 108/254 (42%), Gaps = 33/254 (12%)
Query: 8 LDIGDTLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLK 67
D+GD Y II +G G V T VA+K + A F +T + L +
Sbjct: 51 FDVGDE----YEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNA--FDVVTNAKRTLRE 104
Query: 68 ITISNHHEYQNHV-VKFLDHFTVLGDNGVHACIVFELAGQTLSEF-KSINYLNMNCMKDI 125
+ I H ++ N + +K + TV +V +L L + S L + ++
Sbjct: 105 LKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYF 164
Query: 126 SRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAY- 184
Q+L+GL Y+H ++H DLK N+LV + L I D G A
Sbjct: 165 LYQLLRGLKYMHS-AQVIHRDLKPSNLLVNENCEL---------------KIGDFGMARG 208
Query: 185 ------KNNAFEFDYIQAREFRAAEVVLG-GKLGKPVDIWSTACITYQMVTGEYLFDPNL 237
++ F +Y+ R +RA E++L + + +D+WS CI +M+ LF P
Sbjct: 209 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLF-PGK 267
Query: 238 NDFQHIERMTEILG 251
N ++ + +LG
Sbjct: 268 NYVHQLQLIMMVLG 281
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 107/259 (41%), Gaps = 48/259 (18%)
Query: 23 KLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVVK 82
+LG G + V C T ++ A KF+ R + ++ + E + ++K
Sbjct: 18 ELGSGVFAVVKKCREKSTG-------LQYAAKFIKKRRTKSSRRGVSREDI-EREVSILK 69
Query: 83 FLDHFTVLG-----DNGVHACIVFEL-AGQTLSEF-KSINYLNMNCMKDISRQILKGLYY 135
+ H V+ +N ++ EL AG L +F L + +QIL G+YY
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 129
Query: 136 LHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK---NNAFEFD 192
LH + + H DLK +NI++L ++ I D G A+K N F+ +
Sbjct: 130 LHSL-QIAHFDLKPENIMLLDRNVPKPRI-----------KIIDFGLAHKIDFGNEFK-N 176
Query: 193 YIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGD 252
EF A E+V LG D+WS ITY +++G F LGD
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF----------------LGD 220
Query: 253 IP-DKVCNQSRLKAEFYDE 270
+ + N S + EF DE
Sbjct: 221 TKQETLANVSAVNYEFEDE 239
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 33/134 (24%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTT---NIADLGYA- 183
QIL+GL Y+H +++H DLK N+L LNTT I D G A
Sbjct: 134 QILRGLKYIHSA-NVLHRDLKPSNLL------------------LNTTCDLKICDFGLAR 174
Query: 184 -----YKNNAFEFDYIQAREFRAAEVVLGGK-LGKPVDIWSTACITYQMVTGEYLFDPNL 237
+ + F +Y+ R +RA E++L K K +DIWS CI +M++ +F
Sbjct: 175 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK- 233
Query: 238 NDFQHIERMTEILG 251
+++++ ILG
Sbjct: 234 ---HYLDQLNHILG 244
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 33/134 (24%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTT---NIADLGYA- 183
QIL+GL Y+H +++H DLK N+L LNTT I D G A
Sbjct: 137 QILRGLKYIHSA-NVLHRDLKPSNLL------------------LNTTCDLKICDFGLAR 177
Query: 184 -----YKNNAFEFDYIQAREFRAAEVVLGGK-LGKPVDIWSTACITYQMVTGEYLFDPNL 237
+ + F +Y+ R +RA E++L K K +DIWS CI +M++ +F
Sbjct: 178 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK- 236
Query: 238 NDFQHIERMTEILG 251
+++++ ILG
Sbjct: 237 ---HYLDQLNHILG 247
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 33/134 (24%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTT---NIADLGYA- 183
QIL+GL Y+H +++H DLK N+L LNTT I D G A
Sbjct: 138 QILRGLKYIHSA-NVLHRDLKPSNLL------------------LNTTCDLKICDFGLAR 178
Query: 184 -----YKNNAFEFDYIQAREFRAAEVVLGGK-LGKPVDIWSTACITYQMVTGEYLFDPNL 237
+ + F +Y+ R +RA E++L K K +DIWS CI +M++ +F
Sbjct: 179 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK- 237
Query: 238 NDFQHIERMTEILG 251
+++++ ILG
Sbjct: 238 ---HYLDQLNHILG 248
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 33/134 (24%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTT---NIADLGYA- 183
QIL+GL Y+H +++H DLK N+L LNTT I D G A
Sbjct: 129 QILRGLKYIHSA-NVLHRDLKPSNLL------------------LNTTCDLKICDFGLAR 169
Query: 184 -----YKNNAFEFDYIQAREFRAAEVVLGGK-LGKPVDIWSTACITYQMVTGEYLFDPNL 237
+ + F +Y+ R +RA E++L K K +DIWS CI +M++ +F
Sbjct: 170 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK- 228
Query: 238 NDFQHIERMTEILG 251
+++++ ILG
Sbjct: 229 ---HYLDQLNHILG 239
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 33/134 (24%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTT---NIADLGYA- 183
QIL+GL Y+H +++H DLK N+L LNTT I D G A
Sbjct: 152 QILRGLKYIHSA-NVLHRDLKPSNLL------------------LNTTCDLKICDFGLAR 192
Query: 184 -----YKNNAFEFDYIQAREFRAAEVVLGGK-LGKPVDIWSTACITYQMVTGEYLFDPNL 237
+ + F +Y+ R +RA E++L K K +DIWS CI +M++ +F
Sbjct: 193 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK- 251
Query: 238 NDFQHIERMTEILG 251
+++++ ILG
Sbjct: 252 ---HYLDQLNHILG 262
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 64/131 (48%), Gaps = 27/131 (20%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA---- 183
QIL+GL Y+H +++H DLK N+L+ T+ L I D G A
Sbjct: 136 QILRGLKYIHSA-NVLHRDLKPSNLLLNTTCDL---------------KICDFGLARVAD 179
Query: 184 --YKNNAFEFDYIQAREFRAAEVVLGGK-LGKPVDIWSTACITYQMVTGEYLFDPNLNDF 240
+ + F +Y+ R +RA E++L K K +DIWS CI +M++ +F
Sbjct: 180 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK---- 235
Query: 241 QHIERMTEILG 251
+++++ ILG
Sbjct: 236 HYLDQLNHILG 246
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 33/134 (24%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTT---NIADLGYA- 183
QIL+GL Y+H +++H DLK N+L LNTT I D G A
Sbjct: 136 QILRGLKYIHSA-NVLHRDLKPSNLL------------------LNTTCDLKICDFGLAR 176
Query: 184 -----YKNNAFEFDYIQAREFRAAEVVLGGK-LGKPVDIWSTACITYQMVTGEYLFDPNL 237
+ + F +Y+ R +RA E++L K K +DIWS CI +M++ +F
Sbjct: 177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK- 235
Query: 238 NDFQHIERMTEILG 251
+++++ ILG
Sbjct: 236 ---HYLDQLNHILG 246
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 33/134 (24%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTT---NIADLGYA- 183
QIL+GL Y+H +++H DLK N+L LNTT I D G A
Sbjct: 130 QILRGLKYIHSA-NVLHRDLKPSNLL------------------LNTTCDLKICDFGLAR 170
Query: 184 -----YKNNAFEFDYIQAREFRAAEVVLGGK-LGKPVDIWSTACITYQMVTGEYLFDPNL 237
+ + F +Y+ R +RA E++L K K +DIWS CI +M++ +F
Sbjct: 171 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK- 229
Query: 238 NDFQHIERMTEILG 251
+++++ ILG
Sbjct: 230 ---HYLDQLNHILG 240
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 33/134 (24%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTT---NIADLGYA- 183
QIL+GL Y+H +++H DLK N+L LNTT I D G A
Sbjct: 140 QILRGLKYIHSA-NVLHRDLKPSNLL------------------LNTTCDLKICDFGLAR 180
Query: 184 -----YKNNAFEFDYIQAREFRAAEVVLGGK-LGKPVDIWSTACITYQMVTGEYLFDPNL 237
+ + F +Y+ R +RA E++L K K +DIWS CI +M++ +F
Sbjct: 181 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK- 239
Query: 238 NDFQHIERMTEILG 251
+++++ ILG
Sbjct: 240 ---HYLDQLNHILG 250
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 33/134 (24%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTT---NIADLGYA- 183
QIL+GL Y+H +++H DLK N+L LNTT I D G A
Sbjct: 132 QILRGLKYIHSA-NVLHRDLKPSNLL------------------LNTTCDLKICDFGLAR 172
Query: 184 -----YKNNAFEFDYIQAREFRAAEVVLGGK-LGKPVDIWSTACITYQMVTGEYLFDPNL 237
+ + F +Y+ R +RA E++L K K +DIWS CI +M++ +F
Sbjct: 173 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK- 231
Query: 238 NDFQHIERMTEILG 251
+++++ ILG
Sbjct: 232 ---HYLDQLNHILG 242
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 33/134 (24%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTT---NIADLGYA- 183
QIL+GL Y+H +++H DLK N+L LNTT I D G A
Sbjct: 136 QILRGLKYIHSA-NVLHRDLKPSNLL------------------LNTTCDLKICDFGLAR 176
Query: 184 -----YKNNAFEFDYIQAREFRAAEVVLGGK-LGKPVDIWSTACITYQMVTGEYLFDPNL 237
+ + F +Y+ R +RA E++L K K +DIWS CI +M++ +F
Sbjct: 177 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK- 235
Query: 238 NDFQHIERMTEILG 251
+++++ ILG
Sbjct: 236 ---HYLDQLNHILG 246
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 33/134 (24%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTT---NIADLGYA- 183
QIL+GL Y+H +++H DLK N+L LNTT I D G A
Sbjct: 132 QILRGLKYIHSA-NVLHRDLKPSNLL------------------LNTTCDLKICDFGLAR 172
Query: 184 -----YKNNAFEFDYIQAREFRAAEVVLGGK-LGKPVDIWSTACITYQMVTGEYLFDPNL 237
+ + F +Y+ R +RA E++L K K +DIWS CI +M++ +F
Sbjct: 173 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK- 231
Query: 238 NDFQHIERMTEILG 251
+++++ ILG
Sbjct: 232 ---HYLDQLNHILG 242
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 81/174 (46%), Gaps = 17/174 (9%)
Query: 69 TISNHHEYQNHVVKFLDHFTVLGDNGV-----HACIVFELA-GQTLSEFKSINYLNMNCM 122
TI N + + + L H ++ GV + C+V E A G L+ S + + +
Sbjct: 49 TIENVRQ-EAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDIL 107
Query: 123 KDISRQILKGLYYLHE--VCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADL 180
+ + QI +G+ YLH+ + ++H DLK NIL+L G L+ ++ + I D
Sbjct: 108 VNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGD-LSNKILK------ITDF 160
Query: 181 GYAYK-NNAFEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLF 233
G A + + + A + A EV+ K D+WS + ++++TGE F
Sbjct: 161 GLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPF 214
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 107/259 (41%), Gaps = 48/259 (18%)
Query: 23 KLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVVK 82
+LG G + V C T ++ A KF+ R + ++ + E + ++K
Sbjct: 18 ELGSGQFAVVKKCREKSTG-------LQYAAKFIKKRRTKSSRRGVSREDI-EREVSILK 69
Query: 83 FLDHFTVLG-----DNGVHACIVFEL-AGQTLSEF-KSINYLNMNCMKDISRQILKGLYY 135
+ H V+ +N ++ EL AG L +F L + +QIL G+YY
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 129
Query: 136 LHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK---NNAFEFD 192
LH + + H DLK +NI++L ++ I D G A+K N F+ +
Sbjct: 130 LHSL-QIAHFDLKPENIMLLDRNVPKPRI-----------KIIDFGLAHKIDFGNEFK-N 176
Query: 193 YIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGD 252
EF A E+V LG D+WS ITY +++G F LGD
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF----------------LGD 220
Query: 253 IP-DKVCNQSRLKAEFYDE 270
+ + N S + EF DE
Sbjct: 221 TKQETLANVSAVNYEFEDE 239
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 33/134 (24%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTT---NIADLGYA- 183
QIL+GL Y+H +++H DLK N+L LNTT I D G A
Sbjct: 134 QILRGLKYIHSA-NVLHRDLKPSNLL------------------LNTTCDLKICDFGLAR 174
Query: 184 -----YKNNAFEFDYIQAREFRAAEVVLGGK-LGKPVDIWSTACITYQMVTGEYLFDPNL 237
+ + F +Y+ R +RA E++L K K +DIWS CI +M++ +F
Sbjct: 175 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK- 233
Query: 238 NDFQHIERMTEILG 251
+++++ ILG
Sbjct: 234 ---HYLDQLNHILG 244
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 64/134 (47%), Gaps = 33/134 (24%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTT---NIADLGYA- 183
QIL+GL Y+H +++H DLK N+L LNTT I D G A
Sbjct: 130 QILRGLKYIHSA-NVLHRDLKPSNLL------------------LNTTCDLKICDFGLAR 170
Query: 184 -----YKNNAFEFDYIQAREFRAAEVVLGGK-LGKPVDIWSTACITYQMVTGEYLFDPNL 237
+ + F +Y+ R +RA E++L K K +DIWS CI +M++ +F
Sbjct: 171 VADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK- 229
Query: 238 NDFQHIERMTEILG 251
+++++ ILG
Sbjct: 230 ---HYLDQLNHILG 240
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 107/259 (41%), Gaps = 48/259 (18%)
Query: 23 KLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVVK 82
+LG G + V C T ++ A KF+ R + ++ + E + ++K
Sbjct: 18 ELGSGQFAVVKKCREKSTG-------LQYAAKFIKKRRTKSSRRGVSREDI-EREVSILK 69
Query: 83 FLDHFTVLG-----DNGVHACIVFEL-AGQTLSEF-KSINYLNMNCMKDISRQILKGLYY 135
+ H V+ +N ++ EL AG L +F L + +QIL G+YY
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 129
Query: 136 LHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK---NNAFEFD 192
LH + + H DLK +NI++L ++ I D G A+K N F+ +
Sbjct: 130 LHSL-QIAHFDLKPENIMLLDRNVPKPRI-----------KIIDFGLAHKIDFGNEFK-N 176
Query: 193 YIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGD 252
EF A E+V LG D+WS ITY +++G F LGD
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF----------------LGD 220
Query: 253 IP-DKVCNQSRLKAEFYDE 270
+ + N S + EF DE
Sbjct: 221 TKQETLANVSAVNYEFEDE 239
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 107/259 (41%), Gaps = 48/259 (18%)
Query: 23 KLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVVK 82
+LG G + V C T ++ A KF+ R + ++ + E + ++K
Sbjct: 18 ELGSGQFAVVKKCREKSTG-------LQYAAKFIKKRRTKSSRRGVSREDI-EREVSILK 69
Query: 83 FLDHFTVLG-----DNGVHACIVFEL-AGQTLSEF-KSINYLNMNCMKDISRQILKGLYY 135
+ H V+ +N ++ EL AG L +F L + +QIL G+YY
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 129
Query: 136 LHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK---NNAFEFD 192
LH + + H DLK +NI++L ++ I D G A+K N F+ +
Sbjct: 130 LHSL-QIAHFDLKPENIMLLDRNVPKPRI-----------KIIDFGLAHKIDFGNEFK-N 176
Query: 193 YIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGD 252
EF A E+V LG D+WS ITY +++G F LGD
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF----------------LGD 220
Query: 253 IP-DKVCNQSRLKAEFYDE 270
+ + N S + EF DE
Sbjct: 221 TKQETLANVSAVNYEFEDE 239
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 105/259 (40%), Gaps = 48/259 (18%)
Query: 23 KLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVVK 82
+LG G + V C T A K +K + +R V I E + ++K
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKK--RRTKSSRRGVSREDI------EREVSILK 69
Query: 83 FLDHFTVLG-----DNGVHACIVFEL-AGQTLSEF-KSINYLNMNCMKDISRQILKGLYY 135
+ H V+ +N ++ EL AG L +F L + +QIL G+YY
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 129
Query: 136 LHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK---NNAFEFD 192
LH + + H DLK +NI++L ++ I D G A+K N F+ +
Sbjct: 130 LHSL-QIAHFDLKPENIMLLDRNVPKPRI-----------KIIDFGLAHKIDFGNEFK-N 176
Query: 193 YIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGD 252
EF A E+V LG D+WS ITY +++G F LGD
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF----------------LGD 220
Query: 253 IP-DKVCNQSRLKAEFYDE 270
+ + N S + EF DE
Sbjct: 221 TKQETLANVSAVNYEFEDE 239
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 107/259 (41%), Gaps = 48/259 (18%)
Query: 23 KLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVVK 82
+LG G + V C T ++ A KF+ R + ++ + E + ++K
Sbjct: 18 ELGSGKFAVVKKCREKSTG-------LQYAAKFIKKRRTKSSRRGVSREDI-EREVSILK 69
Query: 83 FLDHFTVLG-----DNGVHACIVFEL-AGQTLSEF-KSINYLNMNCMKDISRQILKGLYY 135
+ H V+ +N ++ EL AG L +F L + +QIL G+YY
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 129
Query: 136 LHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK---NNAFEFD 192
LH + + H DLK +NI++L ++ I D G A+K N F+ +
Sbjct: 130 LHSL-QIAHFDLKPENIMLLDRNVPKPRI-----------KIIDFGLAHKIDFGNEFK-N 176
Query: 193 YIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGD 252
EF A E+V LG D+WS ITY +++G F LGD
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF----------------LGD 220
Query: 253 IP-DKVCNQSRLKAEFYDE 270
+ + N S + EF DE
Sbjct: 221 TKQETLANVSAVNYEFEDE 239
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 107/259 (41%), Gaps = 48/259 (18%)
Query: 23 KLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVVK 82
+LG G + V C T ++ A KF+ R + ++ + E + ++K
Sbjct: 18 ELGSGQFAVVKKCREKSTG-------LQYAAKFIKKRRTKSSRRGVSREDI-EREVSILK 69
Query: 83 FLDHFTVLG-----DNGVHACIVFEL-AGQTLSEF-KSINYLNMNCMKDISRQILKGLYY 135
+ H V+ +N ++ EL AG L +F L + +QIL G+YY
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 129
Query: 136 LHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK---NNAFEFD 192
LH + + H DLK +NI++L ++ I D G A+K N F+ +
Sbjct: 130 LHSL-QIAHFDLKPENIMLLDRNVPKPRI-----------KIIDFGLAHKIDFGNEFK-N 176
Query: 193 YIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGD 252
EF A E+V LG D+WS ITY +++G F LGD
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF----------------LGD 220
Query: 253 IP-DKVCNQSRLKAEFYDE 270
+ + N S + EF DE
Sbjct: 221 TKQETLANVSAVNYEFEDE 239
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 105/259 (40%), Gaps = 48/259 (18%)
Query: 23 KLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVVK 82
+LG G + V C T A K +K + +R V I E + ++K
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKK--RRTKSSRRGVSREDI------EREVSILK 69
Query: 83 FLDHFTVLG-----DNGVHACIVFEL-AGQTLSEF-KSINYLNMNCMKDISRQILKGLYY 135
+ H V+ +N ++ EL AG L +F L + +QIL G+YY
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 129
Query: 136 LHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK---NNAFEFD 192
LH + + H DLK +NI++L ++ I D G A+K N F+ +
Sbjct: 130 LHSL-QIAHFDLKPENIMLLDRNVPKPRI-----------KIIDFGLAHKIDFGNEFK-N 176
Query: 193 YIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGD 252
EF A E+V LG D+WS ITY +++G F LGD
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF----------------LGD 220
Query: 253 IP-DKVCNQSRLKAEFYDE 270
+ + N S + EF DE
Sbjct: 221 TKQETLANVSAVNYEFEDE 239
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 107/259 (41%), Gaps = 48/259 (18%)
Query: 23 KLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVVK 82
+LG G + V C T ++ A KF+ R + ++ + E + ++K
Sbjct: 18 ELGSGQFAVVKKCREKSTG-------LQYAAKFIKKRRTKSSRRGVSREDI-EREVSILK 69
Query: 83 FLDHFTVLG-----DNGVHACIVFEL-AGQTLSEF-KSINYLNMNCMKDISRQILKGLYY 135
+ H V+ +N ++ EL AG L +F L + +QIL G+YY
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 129
Query: 136 LHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK---NNAFEFD 192
LH + + H DLK +NI++L ++ I D G A+K N F+ +
Sbjct: 130 LHSL-QIAHFDLKPENIMLLDRNVPKPRI-----------KIIDFGLAHKIDFGNEFK-N 176
Query: 193 YIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGD 252
EF A E+V LG D+WS ITY +++G F LGD
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF----------------LGD 220
Query: 253 IP-DKVCNQSRLKAEFYDE 270
+ + N S + EF DE
Sbjct: 221 TKQETLANVSAVNYEFEDE 239
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 97/229 (42%), Gaps = 36/229 (15%)
Query: 15 ISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGA---PKFLHITRNEVQLLKITIS 71
I Y +++ +G G + V L +I T VA+K++ P L EV+++KI
Sbjct: 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKIL-- 71
Query: 72 NHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILK 131
NH ++VK + + + ++ + + G+ + + + RQI+
Sbjct: 72 NHP----NIVKLFE--VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVS 125
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEF 191
+ Y H+ +VH DLK +N+L+ + IAD G++ N F
Sbjct: 126 AVQYCHQ-KRIVHRDLKAENLLLDADMNI---------------KIADFGFS---NEFTV 166
Query: 192 D-----YIQAREFRAAEVVLGGKLGKP-VDIWSTACITYQMVTGEYLFD 234
+ A + A E+ G K P VD+WS I Y +V+G FD
Sbjct: 167 GGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 105/259 (40%), Gaps = 48/259 (18%)
Query: 23 KLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVVK 82
+LG G + V C T A K +K + +R V I E + ++K
Sbjct: 17 ELGSGQFAVVKKCREKSTGLQYAAKFIKK--RRTKSSRRGVSREDI------EREVSILK 68
Query: 83 FLDHFTVLG-----DNGVHACIVFEL-AGQTLSEF-KSINYLNMNCMKDISRQILKGLYY 135
+ H V+ +N ++ EL AG L +F L + +QIL G+YY
Sbjct: 69 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 128
Query: 136 LHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK---NNAFEFD 192
LH + + H DLK +NI++L ++ I D G A+K N F+ +
Sbjct: 129 LHSL-QIAHFDLKPENIMLLDRNVPKPRI-----------KIIDFGLAHKIDFGNEFK-N 175
Query: 193 YIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGD 252
EF A E+V LG D+WS ITY +++G F LGD
Sbjct: 176 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF----------------LGD 219
Query: 253 IP-DKVCNQSRLKAEFYDE 270
+ + N S + EF DE
Sbjct: 220 TKQETLANVSAVNYEFEDE 238
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 93/230 (40%), Gaps = 34/230 (14%)
Query: 98 CIVFELAGQTLSEFKSI--NYLNMNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVL 155
+VFE Q L + + L K Q+L G+ Y H+ ++H DLK N+L+
Sbjct: 76 VLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR-RVLHRDLKPQNLLIN 134
Query: 156 TSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDY---IQAREFRAAEVVLGGK-LG 211
L IAD G A Y I +RA +V++G K
Sbjct: 135 REGEL---------------KIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYS 179
Query: 212 KPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDKVCNQSRLKAEFYDED 271
+DIWS CI +MV G LF P +++ + R+ ILG P+ + + YD +
Sbjct: 180 TTIDIWSVGCIFAEMVNGTPLF-PGVSEADQLMRIFRILG-TPNSKNWPNVTELPKYDPN 237
Query: 272 GKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSMLHWDSDERFTAAQ 321
++ L F K + DL+ ML D ++R TA Q
Sbjct: 238 ----------FTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQ 277
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 105/259 (40%), Gaps = 48/259 (18%)
Query: 23 KLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVVK 82
+LG G + V C T A K +K + +R V I E + ++K
Sbjct: 17 ELGSGQFAVVKKCREKSTGLQYAAKFIKK--RRTKSSRRGVSREDI------EREVSILK 68
Query: 83 FLDHFTVLG-----DNGVHACIVFEL-AGQTLSEF-KSINYLNMNCMKDISRQILKGLYY 135
+ H V+ +N ++ EL AG L +F L + +QIL G+YY
Sbjct: 69 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 128
Query: 136 LHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK---NNAFEFD 192
LH + + H DLK +NI++L ++ I D G A+K N F+ +
Sbjct: 129 LHSL-QIAHFDLKPENIMLLDRNVPKPRI-----------KIIDFGLAHKIDFGNEFK-N 175
Query: 193 YIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGD 252
EF A E+V LG D+WS ITY +++G F LGD
Sbjct: 176 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF----------------LGD 219
Query: 253 IP-DKVCNQSRLKAEFYDE 270
+ + N S + EF DE
Sbjct: 220 TKQETLANVSAVNYEFEDE 238
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 107/259 (41%), Gaps = 48/259 (18%)
Query: 23 KLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVVK 82
+LG G + V C T ++ A KF+ R + ++ + E + ++K
Sbjct: 18 ELGSGQFAVVKKCREKSTG-------LQYAAKFIKKRRTKSSRRGVSREDI-EREVSILK 69
Query: 83 FLDHFTVLG-----DNGVHACIVFEL-AGQTLSEF-KSINYLNMNCMKDISRQILKGLYY 135
+ H V+ +N ++ EL AG L +F L + +QIL G+YY
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 129
Query: 136 LHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK---NNAFEFD 192
LH + + H DLK +NI++L ++ I D G A+K N F+ +
Sbjct: 130 LHSL-QIAHFDLKPENIMLLDRNVPKPRI-----------KIIDFGLAHKIDFGNEFK-N 176
Query: 193 YIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGD 252
EF A E+V LG D+WS ITY +++G F LGD
Sbjct: 177 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF----------------LGD 220
Query: 253 IP-DKVCNQSRLKAEFYDE 270
+ + N S + EF DE
Sbjct: 221 TKQETLANVSAVNYEFEDE 239
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 98/241 (40%), Gaps = 43/241 (17%)
Query: 12 DTLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQ-LLKITI 70
D L + + +LG G +S V+ C T A+KV+K I R E+ LL+++
Sbjct: 49 DALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVD-KKIVRTEIGVLLRLSH 107
Query: 71 SNHHEYQNHVVKFLDHFTVLGDNGVHACIVFEL--AGQTLSEFKSINYLNMNCMKDISRQ 128
N ++K + F + +V EL G+ Y + D +Q
Sbjct: 108 PN-------IIKLKEIF----ETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQ 156
Query: 129 ILKGLYYLHEVCDLVHTDLKHDNILVLTSET--------LGQKLALEVYEVLNTTNIADL 180
IL+ + YLHE +VH DLK +N+L T G +E ++VL T
Sbjct: 157 ILEAVAYLHE-NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVE-HQVLMKTVCGTP 214
Query: 181 GYAYKNNAFEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTG-EYLFDPNLND 239
GY A E++ G G VD+WS ITY ++ G E +D +
Sbjct: 215 GYC-----------------APEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQ 257
Query: 240 F 240
F
Sbjct: 258 F 258
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 96/236 (40%), Gaps = 46/236 (19%)
Query: 98 CIVFELAGQTLSEFKSI--NYLNMNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVL 155
+VFE Q L + + L K Q+L G+ Y H+ ++H DLK N+L+
Sbjct: 76 VLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR-RVLHRDLKPQNLLIN 134
Query: 156 TSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQAREF---------RAAEVVL 206
L IAD G A AF I R++ RA +V++
Sbjct: 135 REGEL---------------KIADFGLA---RAFG---IPVRKYTHEVVTLWYRAPDVLM 173
Query: 207 GGK-LGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDKVCNQSRLKA 265
G K +DIWS CI +MV G LF P +++ + R+ ILG P+ + +
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNGAPLF-PGVSEADQLMRIFRILG-TPNSKNWPNVTEL 231
Query: 266 EFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSMLHWDSDERFTAAQ 321
YD + ++ L F K + DL+ ML D ++R TA Q
Sbjct: 232 PKYDPN----------FTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQ 277
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 102/243 (41%), Gaps = 44/243 (18%)
Query: 13 TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISN 72
++ Y + +LG G S V C I T A K+ + K++ +
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKI--------------INTKKLSARD 46
Query: 73 HH--EYQNHVVKFLDHFTV------LGDNGVHACIVFEL--AGQTLSEFKSINYLNMNCM 122
H E + + + L H + + + G H +VF+L G+ + + Y +
Sbjct: 47 HQKLEREARICRLLKHPNIVRLHDSISEEGFHY-LVFDLVTGGELFEDIVAREYYSEADA 105
Query: 123 KDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGY 182
+QIL+ + + H + +VH DLK +N+L L S++ G + L AD G
Sbjct: 106 SHCIQQILESVNHCH-LNGIVHRDLKPENLL-LASKSKGAAVKL-----------ADFGL 152
Query: 183 AYKNNAFE---FDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLND 239
A + + F + + + EV+ GKPVD+W+ I Y ++ G + P ++
Sbjct: 153 AIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG---YPPFWDE 209
Query: 240 FQH 242
QH
Sbjct: 210 DQH 212
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 102/243 (41%), Gaps = 44/243 (18%)
Query: 13 TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISN 72
++ Y + +LG G S V C I T A K+ + K++ +
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKI--------------INTKKLSARD 46
Query: 73 HH--EYQNHVVKFLDHFTV------LGDNGVHACIVFEL--AGQTLSEFKSINYLNMNCM 122
H E + + + L H + + + G H +VF+L G+ + + Y +
Sbjct: 47 HQKLEREARICRLLKHPNIVRLHDSISEEGFHY-LVFDLVTGGELFEDIVAREYYSEADA 105
Query: 123 KDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGY 182
+QIL+ + + H + +VH DLK +N+L L S++ G + L AD G
Sbjct: 106 SHCIQQILESVNHCH-LNGIVHRDLKPENLL-LASKSKGAAVKL-----------ADFGL 152
Query: 183 AYKNNAFE---FDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLND 239
A + + F + + + EV+ GKPVD+W+ I Y ++ G + P ++
Sbjct: 153 AIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG---YPPFWDE 209
Query: 240 FQH 242
QH
Sbjct: 210 DQH 212
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 95/230 (41%), Gaps = 24/230 (10%)
Query: 23 KLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQN-HVV 81
++G G TV+ + ET+ VA ++ +T++E Q K Q+ ++V
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDR----KLTKSERQRFKEEAEXLKGLQHPNIV 88
Query: 82 KFLDHF--TVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYLH-E 138
+F D + TV G + +G + K + ++ RQILKGL +LH
Sbjct: 89 RFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTR 148
Query: 139 VCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA-YKNNAFEFDYIQAR 197
++H DLK DNI + T T + I DLG A K +F I
Sbjct: 149 TPPIIHRDLKCDNIFI-TGPT-------------GSVKIGDLGLATLKRASFAKAVIGTP 194
Query: 198 EFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMT 247
EF A E K + VD+++ + T EY + N Q R+T
Sbjct: 195 EFXAPE-XYEEKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVT 243
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 96/236 (40%), Gaps = 46/236 (19%)
Query: 98 CIVFELAGQTLSEFKSI--NYLNMNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVL 155
+VFE Q L + + L K Q+L G+ Y H+ ++H DLK N+L+
Sbjct: 76 VLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR-RVLHRDLKPQNLLIN 134
Query: 156 TSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQAREF---------RAAEVVL 206
L IAD G A AF I R++ RA +V++
Sbjct: 135 REGEL---------------KIADFGLA---RAFG---IPVRKYTHEVVTLWYRAPDVLM 173
Query: 207 GGK-LGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDKVCNQSRLKA 265
G K +DIWS CI +MV G LF P +++ + R+ ILG P+ + +
Sbjct: 174 GSKKYSTTIDIWSVGCIFAEMVNGTPLF-PGVSEADQLMRIFRILG-TPNSKNWPNVTEL 231
Query: 266 EFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSMLHWDSDERFTAAQ 321
YD + ++ L F K + DL+ ML D ++R TA Q
Sbjct: 232 PKYDPN----------FTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQ 277
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 111/272 (40%), Gaps = 40/272 (14%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAP----KFLHITRNEVQLLKITISNHHEY 76
I+ +G G V L ++ET ++ A+K++ K + T NE ++L+
Sbjct: 46 IKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 98
Query: 77 QNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
N F+ ++ ++ + + G+ S + I + + + QI+ YL
Sbjct: 99 -NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H + DL++ DLK +N+L+ + +AD G+A + +
Sbjct: 158 HSL-DLIYRDLKPENLLI---------------DQQGYIKVADFGFAKRVKGRTWXLCGT 201
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
E+ A E++L K VD W+ + Y+M G + P D Q I+ +I
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---YPPFFAD-QPIQIYEKI------- 250
Query: 257 VCNQSRLKAEFYDEDGKLLSNNVEQISLTHHL 288
V + R + F D K L N+ Q+ LT
Sbjct: 251 VSGKVRFPSHF-SSDLKDLLRNLLQVDLTKRF 281
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 100/234 (42%), Gaps = 36/234 (15%)
Query: 10 IGDTLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGA---PKFLHITRNEVQLL 66
+ D I Y +++ +G G + V L +I T VAVK++ L EV+++
Sbjct: 1 MADLHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIM 60
Query: 67 KITISNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDIS 126
K+ NH ++VK + + + ++ + + G+ + ++ +
Sbjct: 61 KVL--NHP----NIVKLFE--VIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKF 112
Query: 127 RQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKN 186
RQI+ + Y H+ +VH DLK +N+L+ + IAD G++
Sbjct: 113 RQIVSAVQYCHQKF-IVHRDLKAENLLLDADMNI---------------KIADFGFS--- 153
Query: 187 NAFEFD-----YIQAREFRAAEVVLGGKLGKP-VDIWSTACITYQMVTGEYLFD 234
N F F + + + A E+ G K P VD+WS I Y +V+G FD
Sbjct: 154 NEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 66/148 (44%), Gaps = 33/148 (22%)
Query: 127 RQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK- 185
+QIL G+YYLH + + H DLK +NI++L ++ I D G A+K
Sbjct: 121 KQILNGVYYLHSL-QIAHFDLKPENIMLLDRNVPKPRI-----------KIIDFGLAHKI 168
Query: 186 --NNAFEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHI 243
N F+ + EF A E+V LG D+WS ITY +++G F
Sbjct: 169 DFGNEFK-NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF---------- 217
Query: 244 ERMTEILGDIP-DKVCNQSRLKAEFYDE 270
LGD + + N S + EF DE
Sbjct: 218 ------LGDTKQETLANVSAVNYEFEDE 239
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 112/272 (41%), Gaps = 40/272 (14%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKI--TISNHHEYQN 78
I+ LG G V L ++ET ++ A+K++ + V+L +I T++ Q
Sbjct: 47 IKTLGTGSFGRVMLVKHMETGNHYAMKILD--------KQKVVKLKQIEHTLNEKRILQA 98
Query: 79 HVVKFLD--HFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
FL F+ ++ ++ + + G+ S + I + + + QI+ YL
Sbjct: 99 VNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 158
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H + DL++ DLK +N+++ + + D G+A + +
Sbjct: 159 HSL-DLIYRDLKPENLMI---------------DQQGYIKVTDFGFAKRVKGRTWXLCGT 202
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
E+ A E++L K VD W+ + Y+M G + P D Q I+ +I
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---YPPFFAD-QPIQIYEKI------- 251
Query: 257 VCNQSRLKAEFYDEDGKLLSNNVEQISLTHHL 288
V + R + F D K L N+ Q+ LT
Sbjct: 252 VSGKVRFPSHF-SSDLKDLLRNLLQVDLTKRF 282
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 112/272 (41%), Gaps = 40/272 (14%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKI--TISNHHEYQN 78
I+ LG G V L ++ET ++ A+K++ + V+L +I T++ Q
Sbjct: 47 IKTLGTGSFGRVMLVKHMETGNHYAMKILD--------KQKVVKLKQIEHTLNEKRILQA 98
Query: 79 HVVKFLD--HFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
FL F+ ++ ++ + + G+ S + I + + + QI+ YL
Sbjct: 99 VNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 158
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H + DL++ DLK +N+++ + + D G+A + +
Sbjct: 159 HSL-DLIYRDLKPENLMI---------------DQQGYIKVTDFGFAKRVKGRTWXLCGT 202
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
E+ A E++L K VD W+ + Y+M G + P D Q I+ +I
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---YPPFFAD-QPIQIYEKI------- 251
Query: 257 VCNQSRLKAEFYDEDGKLLSNNVEQISLTHHL 288
V + R + F D K L N+ Q+ LT
Sbjct: 252 VSGKVRFPSHF-SSDLKDLLRNLLQVDLTKRF 282
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 110/272 (40%), Gaps = 40/272 (14%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAP----KFLHITRNEVQLLKITISNHHEY 76
I+ LG G V L ++ET ++ A+K++ K + T NE ++L+
Sbjct: 32 IKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 84
Query: 77 QNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
N F+ ++ ++ + + G+ S + I + + + QI+ YL
Sbjct: 85 -NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 143
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H + DL++ DLK +N+L+ + + D G+A + +
Sbjct: 144 HSL-DLIYRDLKPENLLI---------------DQQGYIQVTDFGFAKRVKGRTWTLCGT 187
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
E+ A E++L K VD W+ + Y+M G + P D Q I+ +I
Sbjct: 188 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---YPPFFAD-QPIQIYEKI------- 236
Query: 257 VCNQSRLKAEFYDEDGKLLSNNVEQISLTHHL 288
V + R + F D K L N+ Q+ LT
Sbjct: 237 VSGKVRFPSHF-SSDLKDLLRNLLQVDLTKRF 267
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 97/229 (42%), Gaps = 36/229 (15%)
Query: 15 ISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGA---PKFLHITRNEVQLLKITIS 71
I Y +++ +G G + V L +I T VA+K++ P L EV+++KI
Sbjct: 11 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKIL-- 68
Query: 72 NHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILK 131
NH ++VK + + + ++ + + G+ + + + RQI+
Sbjct: 69 NHP----NIVKLFE--VIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVS 122
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEF 191
+ Y H+ +VH DLK +N+L+ + IAD G++ N F
Sbjct: 123 AVQYCHQ-KRIVHRDLKAENLLLDADMNI---------------KIADFGFS---NEFTV 163
Query: 192 D-----YIQAREFRAAEVVLGGKLGKP-VDIWSTACITYQMVTGEYLFD 234
+ + + A E+ G K P VD+WS I Y +V+G FD
Sbjct: 164 GGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 110/272 (40%), Gaps = 40/272 (14%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAP----KFLHITRNEVQLLKITISNHHEY 76
I+ LG G V L ++ET ++ A+K++ K + T NE ++L+
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 98
Query: 77 QNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
N F+ ++ ++ + + G+ S + I + + + QI+ YL
Sbjct: 99 -NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H + DL++ DLK +N+L+ + + D G+A + +
Sbjct: 158 HSL-DLIYRDLKPENLLI---------------DQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
E+ A E++L K VD W+ + Y+M G + P D Q I+ +I
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---YPPFFAD-QPIQIYEKI------- 250
Query: 257 VCNQSRLKAEFYDEDGKLLSNNVEQISLTHHL 288
V + R + F D K L N+ Q+ LT
Sbjct: 251 VSGKVRFPSHF-SSDLKDLLRNLLQVDLTKRF 281
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 110/272 (40%), Gaps = 40/272 (14%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAP----KFLHITRNEVQLLKITISNHHEY 76
I+ +G G V L ++ET ++ A+K++ K + T NE ++L+
Sbjct: 46 IKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 98
Query: 77 QNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
N F+ ++ ++ + + G S + I + + + QI+ YL
Sbjct: 99 -NFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H + DL++ DLK +N+L+ + +AD G+A + +
Sbjct: 158 HSL-DLIYRDLKPENLLI---------------DQQGYIKVADFGFAKRVKGRTWXLCGT 201
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
E+ A E++L K VD W+ + Y+M G + P D Q I+ +I
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---YPPFFAD-QPIQIYEKI------- 250
Query: 257 VCNQSRLKAEFYDEDGKLLSNNVEQISLTHHL 288
V + R + F D K L N+ Q+ LT
Sbjct: 251 VSGKVRFPSHF-SSDLKDLLRNLLQVDLTKRF 281
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 110/272 (40%), Gaps = 40/272 (14%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAP----KFLHITRNEVQLLKITISNHHEY 76
I+ LG G V L ++ET ++ A+K++ K + T NE ++L+
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 98
Query: 77 QNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
N F+ ++ ++ + + G+ S + I + + + QI+ YL
Sbjct: 99 -NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H + DL++ DLK +N+L+ + + D G+A + +
Sbjct: 158 HSL-DLIYRDLKPENLLI---------------DQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
E+ A E++L K VD W+ + Y+M G + P D Q I+ +I
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---YPPFFAD-QPIQIYEKI------- 250
Query: 257 VCNQSRLKAEFYDEDGKLLSNNVEQISLTHHL 288
V + R + F D K L N+ Q+ LT
Sbjct: 251 VSGKVRFPSHF-SSDLKDLLRNLLQVDLTKRF 281
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 110/272 (40%), Gaps = 40/272 (14%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAP----KFLHITRNEVQLLKITISNHHEY 76
I+ LG G V L ++ET ++ A+K++ K + T NE ++L+
Sbjct: 47 IKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 99
Query: 77 QNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
N F+ ++ ++ + + G+ S + I + + + QI+ YL
Sbjct: 100 -NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 158
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H + DL++ DLK +N+L+ + + D G+A + +
Sbjct: 159 HSL-DLIYRDLKPENLLI---------------DQQGYIQVTDFGFAKRVKGRTWXLCGT 202
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
E+ A E++L K VD W+ + Y+M G + P D Q I+ +I
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---YPPFFAD-QPIQIYEKI------- 251
Query: 257 VCNQSRLKAEFYDEDGKLLSNNVEQISLTHHL 288
V + R + F D K L N+ Q+ LT
Sbjct: 252 VSGKVRFPSHF-SSDLKDLLRNLLQVDLTKRF 282
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 110/272 (40%), Gaps = 40/272 (14%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAP----KFLHITRNEVQLLKITISNHHEY 76
I+ +G G V L ++ET ++ A+K++ K + T NE ++L+
Sbjct: 46 IKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 98
Query: 77 QNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
N F+ ++ ++ + + G S + I + + + QI+ YL
Sbjct: 99 -NFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H + DL++ DLK +N+L+ + +AD G+A + +
Sbjct: 158 HSL-DLIYRDLKPENLLI---------------DQQGYIKVADFGFAKRVKGRTWXLCGT 201
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
E+ A E++L K VD W+ + Y+M G + P D Q I+ +I
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---YPPFFAD-QPIQIYEKI------- 250
Query: 257 VCNQSRLKAEFYDEDGKLLSNNVEQISLTHHL 288
V + R + F D K L N+ Q+ LT
Sbjct: 251 VSGKVRFPSHF-SSDLKDLLRNLLQVDLTKRF 281
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 110/272 (40%), Gaps = 40/272 (14%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAP----KFLHITRNEVQLLKITISNHHEY 76
I+ LG G V L ++ET ++ A+K++ K + T NE ++L+
Sbjct: 47 IKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 99
Query: 77 QNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
N F+ ++ ++ + + G+ S + I + + + QI+ YL
Sbjct: 100 -NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 158
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H + DL++ DLK +N+L+ + + D G+A + +
Sbjct: 159 HSL-DLIYRDLKPENLLI---------------DQQGYIQVTDFGFAKRVKGRTWTLCGT 202
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
E+ A E++L K VD W+ + Y+M G + P D Q I+ +I
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---YPPFFAD-QPIQIYEKI------- 251
Query: 257 VCNQSRLKAEFYDEDGKLLSNNVEQISLTHHL 288
V + R + F D K L N+ Q+ LT
Sbjct: 252 VSGKVRFPSHF-SSDLKDLLRNLLQVDLTKRF 282
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 110/272 (40%), Gaps = 40/272 (14%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAP----KFLHITRNEVQLLKITISNHHEY 76
I+ LG G V L ++ET ++ A+K++ K + T NE ++L+
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 98
Query: 77 QNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
N F+ ++ ++ + + G+ S + I + + + QI+ YL
Sbjct: 99 -NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H + DL++ DLK +N+L+ + + D G+A + +
Sbjct: 158 HSL-DLIYRDLKPENLLI---------------DQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
E+ A E++L K VD W+ + Y+M G + P D Q I+ +I
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---YPPFFAD-QPIQIYEKI------- 250
Query: 257 VCNQSRLKAEFYDEDGKLLSNNVEQISLTHHL 288
V + R + F D K L N+ Q+ LT
Sbjct: 251 VSGKVRFPSHF-SSDLKDLLRNLLQVDLTKRF 281
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 97/229 (42%), Gaps = 36/229 (15%)
Query: 15 ISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGA---PKFLHITRNEVQLLKITIS 71
I Y +++ +G G + V L +I T VAVK++ L EV+++K+
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVL-- 70
Query: 72 NHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILK 131
NH ++VK + + + ++ + + G+ + + + RQI+
Sbjct: 71 NHP----NIVKLFE--VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS 124
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEF 191
+ Y H+ +VH DLK +N+L+ + IAD G++ N F F
Sbjct: 125 AVQYCHQKF-IVHRDLKAENLLLDADMNI---------------KIADFGFS---NEFTF 165
Query: 192 D-----YIQAREFRAAEVVLGGKLGKP-VDIWSTACITYQMVTGEYLFD 234
+ A + A E+ G K P VD+WS I Y +V+G FD
Sbjct: 166 GNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 110/272 (40%), Gaps = 40/272 (14%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAP----KFLHITRNEVQLLKITISNHHEY 76
I+ LG G V L ++ET ++ A+K++ K + T NE ++L+
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 98
Query: 77 QNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
N F+ ++ ++ + + G+ S + I + + + QI+ YL
Sbjct: 99 -NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H + DL++ DLK +N+L+ + + D G+A + +
Sbjct: 158 HSL-DLIYRDLKPENLLI---------------DQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
E+ A E++L K VD W+ + Y+M G + P D Q I+ +I
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---YPPFFAD-QPIQIYEKI------- 250
Query: 257 VCNQSRLKAEFYDEDGKLLSNNVEQISLTHHL 288
V + R + F D K L N+ Q+ LT
Sbjct: 251 VSGKVRFPSHF-SSDLKDLLRNLLQVDLTKRF 281
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 110/272 (40%), Gaps = 40/272 (14%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAP----KFLHITRNEVQLLKITISNHHEY 76
I+ LG G V L ++ET ++ A+K++ K + T NE ++L+
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 98
Query: 77 QNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
N F+ ++ ++ + + G+ S + I + + + QI+ YL
Sbjct: 99 -NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H + DL++ DLK +N+++ + + D G+A + +
Sbjct: 158 HSL-DLIYRDLKPENLMI---------------DQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
E+ A E++L K VD W+ + Y+M G + P D Q I+ +I
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---YPPFFAD-QPIQIYEKI------- 250
Query: 257 VCNQSRLKAEFYDEDGKLLSNNVEQISLTHHL 288
V + R + F D K L N+ Q+ LT
Sbjct: 251 VSGKVRFPSHF-SSDLKDLLRNLLQVDLTKRF 281
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 98/231 (42%), Gaps = 42/231 (18%)
Query: 17 TYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGA--------------PKFLHITRNE 62
+YF +RKLG G V LC S A+KV+K + KF NE
Sbjct: 37 SYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNE 96
Query: 63 VQLLKITISNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCM 122
+ LLK S H +++K D F + F G+ + + + +
Sbjct: 97 ISLLK---SLDHP---NIIKLFDVFE--DKKYFYLVTEFYEGGELFEQIINRHKFDECDA 148
Query: 123 KDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGY 182
+I +QIL G+ YLH+ ++VH D+K +NIL+ +L LN I D G
Sbjct: 149 ANIMKQILSGICYLHK-HNIVHRDIKPENILLENKNSL-----------LNIK-IVDFGL 195
Query: 183 AYKNNAFEFDY-IQAR---EFRAAEVVLGGKLGKPVDIWSTACITYQMVTG 229
+ + F DY ++ R + A VL K + D+WS I Y ++ G
Sbjct: 196 S---SFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCG 243
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 110/272 (40%), Gaps = 40/272 (14%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAP----KFLHITRNEVQLLKITISNHHEY 76
I+ LG G V L ++ET ++ A+K++ K + T NE ++L+
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 98
Query: 77 QNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
N F+ ++ ++ + + G+ S + I + + + QI+ YL
Sbjct: 99 -NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H + DL++ DLK +N+++ + + D G+A + +
Sbjct: 158 HSL-DLIYRDLKPENLMI---------------DQQGYIKVTDFGFAKRVKGRTWXLCGT 201
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
E+ A E++L K VD W+ + Y+M G + P D Q I+ +I
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---YPPFFAD-QPIQIYEKI------- 250
Query: 257 VCNQSRLKAEFYDEDGKLLSNNVEQISLTHHL 288
V + R + F D K L N+ Q+ LT
Sbjct: 251 VSGKVRFPSHF-SSDLKDLLRNLLQVDLTKRF 281
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 89/202 (44%), Gaps = 35/202 (17%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA---- 183
QIL+GL Y+H +++H DLK N+L+ T+ L I D G A
Sbjct: 152 QILRGLKYIHS-ANVLHRDLKPSNLLINTTCDL---------------KICDFGLARIAD 195
Query: 184 --YKNNAFEFDYIQAREFRAAEVVLGGK-LGKPVDIWSTACITYQMVTGEYLFDPNLNDF 240
+ + F + + R +RA E++L K K +DIWS CI +M++ +F P +
Sbjct: 196 PEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF-PGKHYL 254
Query: 241 QHIERMTEILGDIPDKVCN-QSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESL 299
+ + ILG + N +KA Y + S T + F KS+S
Sbjct: 255 DQLNHILGILGSPSQEDLNCIINMKARNYLQSLP---------SKTKVAWAKLFPKSDSK 305
Query: 300 TFSDLILSMLHWDSDERFTAAQ 321
DL+ ML ++ ++R T +
Sbjct: 306 AL-DLLDRMLTFNPNKRITVEE 326
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 111/272 (40%), Gaps = 40/272 (14%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKI--TISNHHEYQN 78
I+ LG G V L ++ET ++ A+K++ + V+L +I T++ Q
Sbjct: 47 IKTLGTGSFGRVMLVKHMETGNHYAMKILD--------KQKVVKLKQIEHTLNEKRILQA 98
Query: 79 HVVKFLD--HFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
FL F+ ++ ++ + + G+ S + I + + QI+ YL
Sbjct: 99 VNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYL 158
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H + DL++ DLK +N+++ + + D G+A + +
Sbjct: 159 HSL-DLIYRDLKPENLMI---------------DQQGYIKVTDFGFAKRVKGRTWXLCGT 202
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
E+ A E++L K VD W+ + Y+M G + P D Q I+ +I
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---YPPFFAD-QPIQIYEKI------- 251
Query: 257 VCNQSRLKAEFYDEDGKLLSNNVEQISLTHHL 288
V + R + F D K L N+ Q+ LT
Sbjct: 252 VSGKVRFPSHF-SSDLKDLLRNLLQVDLTKRF 282
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 94/225 (41%), Gaps = 29/225 (12%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQ 77
Y + +LG G + V C T A K +K + L +R V +I E +
Sbjct: 7 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIK--KRRLSSSRRGVSREEI------ERE 58
Query: 78 NHVVKFLDHFTVLG-----DNGVHACIVFEL--AGQTLSEFKSINYLNMNCMKDISRQIL 130
++++ + H ++ +N ++ EL G+ L + +QIL
Sbjct: 59 VNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQIL 118
Query: 131 KGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAF- 189
G++YLH + H DLK +NI++L ++ L D G A+K A
Sbjct: 119 DGVHYLHS-KRIAHFDLKPENIMLLDKNVPNPRIKL-----------IDFGIAHKIEAGN 166
Query: 190 EFDYI-QAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLF 233
EF I EF A E+V LG D+WS ITY +++G F
Sbjct: 167 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 211
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 109/272 (40%), Gaps = 40/272 (14%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAP----KFLHITRNEVQLLKITISNHHEY 76
I+ LG G V L ++ET ++ A+K++ K + T NE ++L+
Sbjct: 47 IKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 99
Query: 77 QNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
N F+ ++ ++ + + G+ S + I + + QI+ YL
Sbjct: 100 -NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYL 158
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H + DL++ DLK +N+L+ + + D G+A + +
Sbjct: 159 HSL-DLIYRDLKPENLLI---------------DQQGYIQVTDFGFAKRVKGRTWXLCGT 202
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
E+ A E++L K VD W+ + Y+M G + P D Q I+ +I
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---YPPFFAD-QPIQIYEKI------- 251
Query: 257 VCNQSRLKAEFYDEDGKLLSNNVEQISLTHHL 288
V + R + F D K L N+ Q+ LT
Sbjct: 252 VSGKVRFPSHF-SSDLKDLLRNLLQVDLTKRF 282
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 109/272 (40%), Gaps = 40/272 (14%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAP----KFLHITRNEVQLLKITISNHHEY 76
I+ LG G V L ++ET ++ A+K++ K + T NE ++L+
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 98
Query: 77 QNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
N F+ ++ ++ + + G+ S + I + + QI+ YL
Sbjct: 99 -NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYL 157
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H + DL++ DLK +N+++ + + D G+A + +
Sbjct: 158 HSL-DLIYRDLKPENLMI---------------DQQGYIKVTDFGFAKRVKGRTWXLCGT 201
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
E+ A E++L K VD W+ + Y+M G + P D Q I+ +I
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---YPPFFAD-QPIQIYEKI------- 250
Query: 257 VCNQSRLKAEFYDEDGKLLSNNVEQISLTHHL 288
V + R + F D K L N+ Q+ LT
Sbjct: 251 VSGKVRFPSHF-SSDLKDLLRNLLQVDLTKRF 281
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 109/272 (40%), Gaps = 40/272 (14%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAP----KFLHITRNEVQLLKITISNHHEY 76
I+ LG G V L ++ET ++ A+K++ K + T NE ++L+
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 98
Query: 77 QNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
N F+ ++ ++ + + G+ S + I + + QI+ YL
Sbjct: 99 -NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYL 157
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H + DL++ DLK +N+L+ + + D G+A + +
Sbjct: 158 HSL-DLIYRDLKPENLLI---------------DQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
E+ A E++L K VD W+ + Y+M G + P D Q I+ +I
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---YPPFFAD-QPIQIYEKI------- 250
Query: 257 VCNQSRLKAEFYDEDGKLLSNNVEQISLTHHL 288
V + R + F D K L N+ Q+ LT
Sbjct: 251 VSGKVRFPSHF-SSDLKDLLRNLLQVDLTKRF 281
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 109/272 (40%), Gaps = 40/272 (14%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAP----KFLHITRNEVQLLKITISNHHEY 76
I+ LG G V L ++ET ++ A+K++ K + T NE ++L+
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 98
Query: 77 QNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
N F+ ++ ++ + + G+ S + I + + QI+ YL
Sbjct: 99 -NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYL 157
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H + DL++ DLK +N+L+ + + D G+A + +
Sbjct: 158 HSL-DLIYRDLKPENLLI---------------DQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
E+ A E++L K VD W+ + Y+M G + P D Q I+ +I
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---YPPFFAD-QPIQIYEKI------- 250
Query: 257 VCNQSRLKAEFYDEDGKLLSNNVEQISLTHHL 288
V + R + F D K L N+ Q+ LT
Sbjct: 251 VSGKVRFPSHF-SSDLKDLLRNLLQVDLTKRF 281
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 94/225 (41%), Gaps = 29/225 (12%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQ 77
Y + +LG G + V C T A K +K + L +R V +I E +
Sbjct: 14 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKK--RRLSSSRRGVSREEI------ERE 65
Query: 78 NHVVKFLDHFTVLG-----DNGVHACIVFEL--AGQTLSEFKSINYLNMNCMKDISRQIL 130
++++ + H ++ +N ++ EL G+ L + +QIL
Sbjct: 66 VNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQIL 125
Query: 131 KGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAF- 189
G++YLH + H DLK +NI++L ++ L D G A+K A
Sbjct: 126 DGVHYLHS-KRIAHFDLKPENIMLLDKNVPNPRIKL-----------IDFGIAHKIEAGN 173
Query: 190 EFDYI-QAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLF 233
EF I EF A E+V LG D+WS ITY +++G F
Sbjct: 174 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 94/225 (41%), Gaps = 29/225 (12%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQ 77
Y + +LG G + V C T A K +K + L +R V +I E +
Sbjct: 28 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIK--KRRLXSSRRGVSREEI------ERE 79
Query: 78 NHVVKFLDHFTVLG-----DNGVHACIVFEL--AGQTLSEFKSINYLNMNCMKDISRQIL 130
++++ + H ++ +N ++ EL G+ L + +QIL
Sbjct: 80 VNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQIL 139
Query: 131 KGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAF- 189
G++YLH + H DLK +NI++L ++ L D G A+K A
Sbjct: 140 DGVHYLHS-KRIAHFDLKPENIMLLDKNVPNPRIKL-----------IDFGIAHKIEAGN 187
Query: 190 EFDYI-QAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLF 233
EF I EF A E+V LG D+WS ITY +++G F
Sbjct: 188 EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 232
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 98/229 (42%), Gaps = 36/229 (15%)
Query: 15 ISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGA---PKFLHITRNEVQLLKITIS 71
I Y +++ +G G + V L +I T VAV+++ L EV+++K+
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVL-- 70
Query: 72 NHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILK 131
NH ++VK + + + ++ + + G+ + + + RQI+
Sbjct: 71 NHP----NIVKLFE--VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS 124
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEF 191
+ Y H+ +VH DLK +N+L+ + IAD G++ N F F
Sbjct: 125 AVQYCHQKF-IVHRDLKAENLLLDADMNI---------------KIADFGFS---NEFTF 165
Query: 192 -----DYIQAREFRAAEVVLGGKLGKP-VDIWSTACITYQMVTGEYLFD 234
++ + + A E+ G K P VD+WS I Y +V+G FD
Sbjct: 166 GNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 106/259 (40%), Gaps = 48/259 (18%)
Query: 23 KLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVVK 82
+LG G + V C T ++ A KF+ R + ++ + E + ++K
Sbjct: 18 ELGSGQFAVVKKCREKSTG-------LQYAAKFIKKRRTKSSRRGVSREDI-EREVSILK 69
Query: 83 FLDHFTVLG-----DNGVHACIVFEL-AGQTLSEF-KSINYLNMNCMKDISRQILKGLYY 135
+ H V+ +N ++ EL AG L +F L + +QIL G+YY
Sbjct: 70 EIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 129
Query: 136 LHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK---NNAFEFD 192
LH + + H DLK +NI++L ++ I D G A+K N F+ +
Sbjct: 130 LHSL-QIAHFDLKPENIMLLDRNVPKPRI-----------KIIDFGLAHKIDFGNEFK-N 176
Query: 193 YIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGD 252
F A E+V LG D+WS ITY +++G F LGD
Sbjct: 177 IFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF----------------LGD 220
Query: 253 IP-DKVCNQSRLKAEFYDE 270
+ + N S + EF DE
Sbjct: 221 TKQETLANVSAVNYEFEDE 239
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 63/134 (47%), Gaps = 33/134 (24%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTT---NIADLGYA- 183
QIL+GL Y+H +++H DLK N+L LNTT I D G A
Sbjct: 136 QILRGLKYIHSA-NVLHRDLKPSNLL------------------LNTTCDLKICDFGLAR 176
Query: 184 -----YKNNAFEFDYIQAREFRAAEVVLGGK-LGKPVDIWSTACITYQMVTGEYLFDPNL 237
+ + F + + R +RA E++L K K +DIWS CI +M++ +F
Sbjct: 177 VADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK- 235
Query: 238 NDFQHIERMTEILG 251
+++++ ILG
Sbjct: 236 ---HYLDQLNHILG 246
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 63/134 (47%), Gaps = 33/134 (24%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTT---NIADLGYA- 183
QIL+GL Y+H +++H DLK N+L LNTT I D G A
Sbjct: 137 QILRGLKYIHSA-NVLHRDLKPSNLL------------------LNTTCDLKICDFGLAR 177
Query: 184 -----YKNNAFEFDYIQAREFRAAEVVLGGK-LGKPVDIWSTACITYQMVTGEYLFDPNL 237
+ + F + + R +RA E++L K K +DIWS CI +M++ +F
Sbjct: 178 VADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK- 236
Query: 238 NDFQHIERMTEILG 251
+++++ ILG
Sbjct: 237 ---HYLDQLNHILG 247
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 97/229 (42%), Gaps = 36/229 (15%)
Query: 15 ISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGA---PKFLHITRNEVQLLKITIS 71
I Y +++ +G G + V L +I T VAVK++ L EV+++K+
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVL-- 70
Query: 72 NHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILK 131
NH ++VK + + + ++ + + G+ + + + RQI+
Sbjct: 71 NHP----NIVKLFE--VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS 124
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEF 191
+ Y H+ +VH DLK +N+L+ + IAD G++ N F F
Sbjct: 125 AVQYCHQKF-IVHRDLKAENLLLDADMNI---------------KIADFGFS---NEFTF 165
Query: 192 D-----YIQAREFRAAEVVLGGKLGKP-VDIWSTACITYQMVTGEYLFD 234
+ + + A E+ G K P VD+WS I Y +V+G FD
Sbjct: 166 GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 105/250 (42%), Gaps = 40/250 (16%)
Query: 15 ISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVK-----VMKGAPKFLHITRNEVQLLKIT 69
I Y I LG G V L + +T VA+K ++K + + + R E+ LK+
Sbjct: 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVER-EISYLKLL 66
Query: 70 ISNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEF-KSINYLNMNCMKDISRQ 128
H++K D T D +V E AG L ++ + + + +Q
Sbjct: 67 ------RHPHIIKLYDVITTPTD----IVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQ 116
Query: 129 ILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNA 188
I+ + Y H +VH DLK +N+L+ + L K+A +NI G K +
Sbjct: 117 IICAIEYCHR-HKIVHRDLKPENLLL--DDNLNVKIA-----DFGLSNIMTDGNFLKTSC 168
Query: 189 FEFDYIQAREFRAAEVVLGGKL--GKPVDIWSTACITYQMVTGEYLFD----PNLNDFQH 242
+Y AA V+ GKL G VD+WS + Y M+ G FD PNL F+
Sbjct: 169 GSPNY-------AAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL--FKK 219
Query: 243 IERMTEILGD 252
+ ++ D
Sbjct: 220 VNSCVYVMPD 229
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 109/272 (40%), Gaps = 40/272 (14%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAP----KFLHITRNEVQLLKITISNHHEY 76
I+ LG G V L + E+ ++ A+K++ K + T NE ++L+
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 98
Query: 77 QNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
N F+ ++ ++ + + G+ S + I + + + QI+ YL
Sbjct: 99 -NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H + DL++ DLK +N+L+ + + D G+A + +
Sbjct: 158 HSL-DLIYRDLKPENLLI---------------DQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
E+ A E++L K VD W+ + YQM G + P D Q I+ +I
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG---YPPFFAD-QPIQIYEKI------- 250
Query: 257 VCNQSRLKAEFYDEDGKLLSNNVEQISLTHHL 288
V + R + F D K L N+ Q+ LT
Sbjct: 251 VSGKVRFPSHF-SSDLKDLLRNLLQVDLTKRF 281
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 99/238 (41%), Gaps = 44/238 (18%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHH--E 75
Y + +LG G S V C + A K+ + K++ +H E
Sbjct: 33 YQLFEELGKGAFSVVRRCVKKTPTQEYAAKI--------------INTKKLSARDHQKLE 78
Query: 76 YQNHVVKFLDHFTV------LGDNGVHACIVFEL--AGQTLSEFKSINYLNMNCMKDISR 127
+ + + L H + + + G H +VF+L G+ + + Y +
Sbjct: 79 REARICRLLKHPNIVRLHDSISEEGFHY-LVFDLVTGGELFEDIVAREYYSEADASHCIH 137
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNN 187
QIL+ + ++H+ D+VH DLK +N+L L S+ G + L AD G A +
Sbjct: 138 QILESVNHIHQH-DIVHRDLKPENLL-LASKCKGAAVKL-----------ADFGLAIEVQ 184
Query: 188 AFE---FDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQH 242
+ F + + + EV+ GKPVDIW+ I Y ++ G + P ++ QH
Sbjct: 185 GEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVG---YPPFWDEDQH 239
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 97/229 (42%), Gaps = 36/229 (15%)
Query: 15 ISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGA---PKFLHITRNEVQLLKITIS 71
I Y +++ +G G + V L +I T VAVK++ L EV+++K+
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVL-- 70
Query: 72 NHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILK 131
NH ++VK + + + ++ + + G+ + + + RQI+
Sbjct: 71 NHP----NIVKLFE--VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS 124
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEF 191
+ Y H+ +VH DLK +N+L+ + IAD G++ N F F
Sbjct: 125 AVQYCHQKF-IVHRDLKAENLLLDADMNI---------------KIADFGFS---NEFTF 165
Query: 192 D-----YIQAREFRAAEVVLGGKLGKP-VDIWSTACITYQMVTGEYLFD 234
+ + + A E+ G K P VD+WS I Y +V+G FD
Sbjct: 166 GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 109/272 (40%), Gaps = 40/272 (14%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAP----KFLHITRNEVQLLKITISNHHEY 76
I+ LG G V L + ET ++ A+K++ K + T NE ++L+
Sbjct: 67 IKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 119
Query: 77 QNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
N F+ ++ ++ + + G+ S + I + + + QI+ YL
Sbjct: 120 -NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 178
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H + DL++ DLK +N+L+ + + D G+A + +
Sbjct: 179 HSL-DLIYRDLKPENLLI---------------DQQGYIQVTDFGFAKRVKGRTWXLCGT 222
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
E+ A E++L K VD W+ + Y+M G + P D Q I+ +I
Sbjct: 223 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---YPPFFAD-QPIQIYEKI------- 271
Query: 257 VCNQSRLKAEFYDEDGKLLSNNVEQISLTHHL 288
V + R + F D K L N+ Q+ LT
Sbjct: 272 VSGKVRFPSHF-SSDLKDLLRNLLQVDLTKRF 302
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 109/272 (40%), Gaps = 40/272 (14%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAP----KFLHITRNEVQLLKITISNHHEY 76
I+ LG G V L + ET ++ A+K++ K + T NE ++L+
Sbjct: 47 IKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 99
Query: 77 QNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
N F+ ++ ++ + + G+ S + I + + + QI+ YL
Sbjct: 100 -NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 158
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H + DL++ DLK +N+L+ + + D G+A + +
Sbjct: 159 HSL-DLIYRDLKPENLLI---------------DQQGYIQVTDFGFAKRVKGRTWXLCGT 202
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
E+ A E++L K VD W+ + Y+M G + P D Q I+ +I
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---YPPFFAD-QPIQIYEKI------- 251
Query: 257 VCNQSRLKAEFYDEDGKLLSNNVEQISLTHHL 288
V + R + F D K L N+ Q+ LT
Sbjct: 252 VSGKVRFPSHF-SSDLKDLLRNLLQVDLTKRF 282
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 109/272 (40%), Gaps = 40/272 (14%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAP----KFLHITRNEVQLLKITISNHHEY 76
I+ LG G V L + ET ++ A+K++ K + T NE ++L+
Sbjct: 47 IKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 99
Query: 77 QNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
N F+ ++ ++ + + G+ S + I + + + QI+ YL
Sbjct: 100 -NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 158
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H + DL++ DLK +N+L+ + + D G+A + +
Sbjct: 159 HSL-DLIYRDLKPENLLI---------------DQQGYIQVTDFGFAKRVKGRTWXLCGT 202
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
E+ A E++L K VD W+ + Y+M G + P D Q I+ +I
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---YPPFFAD-QPIQIYEKI------- 251
Query: 257 VCNQSRLKAEFYDEDGKLLSNNVEQISLTHHL 288
V + R + F D K L N+ Q+ LT
Sbjct: 252 VSGKVRFPSHF-SSDLKDLLRNLLQVDLTKRF 282
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 109/272 (40%), Gaps = 40/272 (14%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAP----KFLHITRNEVQLLKITISNHHEY 76
I+ LG G V L + ET ++ A+K++ K + T NE ++L+
Sbjct: 39 IKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 91
Query: 77 QNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
N F+ ++ ++ + + G+ S + I + + + QI+ YL
Sbjct: 92 -NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 150
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H + DL++ DLK +N+L+ + + D G+A + +
Sbjct: 151 HSL-DLIYRDLKPENLLI---------------DQQGYIQVTDFGFAKRVKGRTWXLCGT 194
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
E+ A E++L K VD W+ + Y+M G + P D Q I+ +I
Sbjct: 195 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---YPPFFAD-QPIQIYEKI------- 243
Query: 257 VCNQSRLKAEFYDEDGKLLSNNVEQISLTHHL 288
V + R + F D K L N+ Q+ LT
Sbjct: 244 VSGKVRFPSHF-SSDLKDLLRNLLQVDLTKRF 274
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 109/272 (40%), Gaps = 40/272 (14%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAP----KFLHITRNEVQLLKITISNHHEY 76
I+ LG G V L + ET ++ A+K++ K + T NE ++L+
Sbjct: 47 IKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 99
Query: 77 QNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
N F+ ++ ++ + + G+ S + I + + + QI+ YL
Sbjct: 100 -NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 158
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H + DL++ DLK +N+++ + + D G+A + +
Sbjct: 159 HSL-DLIYRDLKPENLMI---------------DQQGYIKVTDFGFAKRVKGRTWXLCGT 202
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
E+ A E++L K VD W+ + Y+M G + P D Q I+ +I
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---YPPFFAD-QPIQIYEKI------- 251
Query: 257 VCNQSRLKAEFYDEDGKLLSNNVEQISLTHHL 288
V + R + F D K L N+ Q+ LT
Sbjct: 252 VSGKVRFPSHF-SSDLKDLLRNLLQVDLTKRF 282
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 96/220 (43%), Gaps = 29/220 (13%)
Query: 117 LNMNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTN 176
L +K + QIL G++YLH ++H DLK NILV+ ++
Sbjct: 125 LPRGMVKSLLYQILDGIHYLHANW-VLHRDLKPANILVMGEGPERGRV-----------K 172
Query: 177 IADLGYAYKNNA-----FEFDYIQAR-EFRAAEVVLGGK-LGKPVDIWSTACITYQMVTG 229
IAD+G+A N+ + D + +RA E++LG + K +DIW+ CI +++T
Sbjct: 173 IADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS 232
Query: 230 EYLFDPNLNDFQ--------HIERMTEILGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQ 281
E +F D + ++R+ ++G DK + E N
Sbjct: 233 EPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTN 292
Query: 282 ISLTHHLQERGFSKSESLTFSDLILSMLHWDSDERFTAAQ 321
SL ++ E+ K +S F L+ +L D +R T+ Q
Sbjct: 293 CSLIKYM-EKHKVKPDSKAFH-LLQKLLTMDPIKRITSEQ 330
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 109/272 (40%), Gaps = 40/272 (14%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAP----KFLHITRNEVQLLKITISNHHEY 76
I+ LG G V L + ET ++ A+K++ K + T NE ++L+
Sbjct: 47 IKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 99
Query: 77 QNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
N F+ ++ ++ + + G+ S + I + + + QI+ YL
Sbjct: 100 -NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 158
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H + DL++ DLK +N+L+ + + D G+A + +
Sbjct: 159 HSL-DLIYRDLKPENLLI---------------DQQGYIQVTDFGFAKRVKGRTWXLCGT 202
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
E+ A E++L K VD W+ + Y+M G + P D Q I+ +I
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---YPPFFAD-QPIQIYEKI------- 251
Query: 257 VCNQSRLKAEFYDEDGKLLSNNVEQISLTHHL 288
V + R + F D K L N+ Q+ LT
Sbjct: 252 VSGKVRFPSHF-SSDLKDLLRNLLQVDLTKRF 282
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 95/219 (43%), Gaps = 31/219 (14%)
Query: 17 TYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHIT-RNEVQLLKITISNHHE 75
T+ + LG G S V+L T A+K +K +P F + NE+ +LK HE
Sbjct: 10 TFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKI---KHE 66
Query: 76 YQNHVVKFLDHFTVLGDNGVHACIVFEL-AGQTLSEFKSINYLNMNCMKDIS---RQILK 131
++V D + ++ H +V +L +G L F I + KD S +Q+L
Sbjct: 67 ---NIVTLEDIY----ESTTHYYLVMQLVSGGEL--FDRILERGVYTEKDASLVIQQVLS 117
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA-YKNNAFE 190
+ YLHE +VH DLK +N+L LT E + + I D G + + N
Sbjct: 118 AVKYLHE-NGIVHRDLKPENLLYLTPEENSKIM------------ITDFGLSKMEQNGIM 164
Query: 191 FDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTG 229
+ A EV+ K VD WS ITY ++ G
Sbjct: 165 STACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 109/272 (40%), Gaps = 40/272 (14%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAP----KFLHITRNEVQLLKITISNHHEY 76
I+ LG G V L ++ET ++ A+K++ K + T NE ++L+
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAV------- 98
Query: 77 QNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
N F+ ++ ++ + + G+ S + I + + + QI+ YL
Sbjct: 99 -NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H + DL++ DLK +N+++ + + D G A + +
Sbjct: 158 HSL-DLIYRDLKPENLMI---------------DQQGYIKVTDFGLAKRVKGRTWXLCGT 201
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
E+ A E++L K VD W+ + Y+M G + P D Q I+ +I
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---YPPFFAD-QPIQIYEKI------- 250
Query: 257 VCNQSRLKAEFYDEDGKLLSNNVEQISLTHHL 288
V + R + F D K L N+ Q+ LT
Sbjct: 251 VSGKVRFPSHF-SSDLKDLLRNLLQVDLTKRF 281
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 109/272 (40%), Gaps = 40/272 (14%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAP----KFLHITRNEVQLLKITISNHHEY 76
I+ LG G V L ++ET ++ A+K++ K + T NE ++L+
Sbjct: 46 IKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAV------- 98
Query: 77 QNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
N F+ ++ ++ + + G+ S + I + + + QI+ YL
Sbjct: 99 -NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H + DL++ DLK +N+++ + + D G A + +
Sbjct: 158 HSL-DLIYRDLKPENLMI---------------DQQGYIQVTDFGLAKRVKGRTWXLCGT 201
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
E+ A E++L K VD W+ + Y+M G + P D Q I+ +I
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---YPPFFAD-QPIQIYEKI------- 250
Query: 257 VCNQSRLKAEFYDEDGKLLSNNVEQISLTHHL 288
V + R + F D K L N+ Q+ LT
Sbjct: 251 VSGKVRFPSHF-SSDLKDLLRNLLQVDLTKRF 281
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 121/292 (41%), Gaps = 38/292 (13%)
Query: 8 LDIGDT--LISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQL 65
+D GD L+ +Y K+G G + V L + VAVK+M R E+
Sbjct: 38 VDQGDPRLLLDSYV---KIGEGSTGIVCLAREKHSGRQVAVKMMD----LRKQQRRELLF 90
Query: 66 LKITISNHHEYQNHVVKFLDHFTVLGDNGVHACIVFE-LAGQTLSEFKSINYLNMNCMKD 124
++ I +++ N VV+ + V G ++ E L G L++ S LN +
Sbjct: 91 NEVVIMRDYQHFN-VVEMYKSYLV----GEELWVLMEFLQGGALTDIVSQVRLNEEQIAT 145
Query: 125 ISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAY 184
+ +L+ L YLH ++H D+K D+IL+ TL ++ L +D G+
Sbjct: 146 VCEAVLQALAYLH-AQGVIHRDIKSDSILL----TLDGRVKL-----------SDFGFCA 189
Query: 185 ---KNNAFEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQ 241
K+ + + A EV+ VDIWS + +MV GE P +D
Sbjct: 190 QISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGE---PPYFSD-S 245
Query: 242 HIERMTEILGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGF 293
++ M + P K+ N ++ D ++L + ++ + L + F
Sbjct: 246 PVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPF 297
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 113/261 (43%), Gaps = 51/261 (19%)
Query: 13 TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMK------GAPKFLHITRNEVQLL 66
T I Y I KLG G V+ + T+ VA+K ++ G P EV LL
Sbjct: 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPG---TAIREVSLL 87
Query: 67 KITISNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINY-LNMNCMKDI 125
K E Q+ + L + ++ +H ++FE A L ++ N ++M +K
Sbjct: 88 K-------ELQHRNIIELKS-VIHHNHRLH--LIFEYAENDLKKYMDKNPDVSMRVIKSF 137
Query: 126 SRQILKGLYYLH-EVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAY 184
Q++ G+ + H C +H DLK N+L+ S+ + I D G A
Sbjct: 138 LYQLINGVNFCHSRRC--LHRDLKPQNLLLSVSDASETPV----------LKIGDFGLA- 184
Query: 185 KNNAFEFDYIQAREF---------RAAEVVLGGK-LGKPVDIWSTACITYQMVTGEYLFD 234
AF I R+F R E++LG + VDIWS ACI +M+ LF
Sbjct: 185 --RAFG---IPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLF- 238
Query: 235 PNLNDFQHIERMTEILGDIPD 255
P ++ + ++ E+LG +PD
Sbjct: 239 PGDSEIDQLFKIFEVLG-LPD 258
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 97/234 (41%), Gaps = 48/234 (20%)
Query: 15 ISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMK-----GAPKFLHITRNEVQLLK-- 67
+ TY + KLG G +TV+ + T + VA+K ++ GAP EV LLK
Sbjct: 1 METYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAP---CTAIREVSLLKDL 57
Query: 68 --ITISNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEF--KSINYLNMNCMK 123
I H+ H K L +VFE + L ++ N +NM+ +K
Sbjct: 58 KHANIVTLHDII-HTEKSL-------------TLVFEYLDKDLKQYLDDCGNIINMHNVK 103
Query: 124 DISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA 183
Q+L+GL Y H ++H DLK N+L+ L +AD G A
Sbjct: 104 LFLFQLLRGLAYCHRQ-KVLHRDLKPQNLLINERGEL---------------KLADFGLA 147
Query: 184 YKNNAFEFDY---IQAREFRAAEVVLGGK-LGKPVDIWSTACITYQMVTGEYLF 233
+ Y + +R +++LG +D+W CI Y+M TG LF
Sbjct: 148 RAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLF 201
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 108/272 (39%), Gaps = 40/272 (14%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAP----KFLHITRNEVQLLKITISNHHEY 76
I+ LG G V L + ET ++ A+K++ K + T NE ++L+
Sbjct: 39 IKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 91
Query: 77 QNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
N F+ ++ ++ + + G+ S + I + + QI+ YL
Sbjct: 92 -NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYL 150
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H + DL++ DLK +N+L+ + + D G+A + +
Sbjct: 151 HSL-DLIYRDLKPENLLI---------------DQQGYIQVTDFGFAKRVKGRTWXLCGT 194
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
E+ A E++L K VD W+ + Y+M G + P D Q I+ +I
Sbjct: 195 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---YPPFFAD-QPIQIYEKI------- 243
Query: 257 VCNQSRLKAEFYDEDGKLLSNNVEQISLTHHL 288
V + R + F D K L N+ Q+ LT
Sbjct: 244 VSGKVRFPSHF-SSDLKDLLRNLLQVDLTKRF 274
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 97/229 (42%), Gaps = 36/229 (15%)
Query: 15 ISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGA---PKFLHITRNEVQLLKITIS 71
I Y +++ +G G + V L +I T VAV+++ L EV+++K+
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVL-- 70
Query: 72 NHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILK 131
NH ++VK + + + ++ + + G+ + + + RQI+
Sbjct: 71 NHP----NIVKLFE--VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS 124
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEF 191
+ Y H+ +VH DLK +N+L+ + IAD G++ N F F
Sbjct: 125 AVQYCHQKF-IVHRDLKAENLLLDADMNI---------------KIADFGFS---NEFTF 165
Query: 192 D-----YIQAREFRAAEVVLGGKLGKP-VDIWSTACITYQMVTGEYLFD 234
+ + + A E+ G K P VD+WS I Y +V+G FD
Sbjct: 166 GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 113/275 (41%), Gaps = 46/275 (16%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHV 80
I+ LG G V L + E+ ++ A+K++ ++ +++K+ H + +
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKIL-----------DKQKVVKLKQIEHTLNEKRI 94
Query: 81 VKFLD-------HFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGL 133
++ ++ F+ ++ ++ + + G+ S + I + + + QI+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 134 YYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDY 193
YLH + DL++ DLK +N+L+ + + D G+A + +
Sbjct: 155 EYLHSL-DLIYRDLKPENLLI---------------DQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 194 IQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDI 253
E+ A E++L K VD W+ + Y+M G + P D Q I+ +I
Sbjct: 199 AGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---YPPFFAD-QPIQIYEKI---- 250
Query: 254 PDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHL 288
V + R + F D K L N+ Q+ LT
Sbjct: 251 ---VSGKVRFPSHF-SSDLKDLLRNLLQVDLTKRF 281
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 109/272 (40%), Gaps = 40/272 (14%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAP----KFLHITRNEVQLLKITISNHHEY 76
I+ LG G V L + E+ ++ A+K++ K + T NE ++L+
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 98
Query: 77 QNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
N F+ ++ ++ + + G+ S + I + + + QI+ YL
Sbjct: 99 -NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H + DL++ DLK +N+L+ + + D G+A + +
Sbjct: 158 HSL-DLIYRDLKPENLLI---------------DQQGYIQVTDFGFAKRVKGRTWXLXGT 201
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
E+ A E++L K VD W+ + Y+M G + P D Q I+ +I
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---YPPFFAD-QPIQIYEKI------- 250
Query: 257 VCNQSRLKAEFYDEDGKLLSNNVEQISLTHHL 288
V + R + F D K L N+ Q+ LT
Sbjct: 251 VSGKVRFPSHF-SSDLKDLLRNLLQVDLTKRF 281
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 109/272 (40%), Gaps = 40/272 (14%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAP----KFLHITRNEVQLLKITISNHHEY 76
I+ LG G V L + E+ ++ A+K++ K + T NE ++L+
Sbjct: 67 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 119
Query: 77 QNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
N F+ ++ ++ + + G+ S + I + + + QI+ YL
Sbjct: 120 -NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 178
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H + DL++ DLK +N+L+ + + D G+A + +
Sbjct: 179 HSL-DLIYRDLKPENLLI---------------DQQGYIQVTDFGFAKRVKGATWTLCGT 222
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
E+ A E++L K VD W+ + Y+M G + P D Q I+ +I
Sbjct: 223 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---YPPFFAD-QPIQIYEKI------- 271
Query: 257 VCNQSRLKAEFYDEDGKLLSNNVEQISLTHHL 288
V + R + F D K L N+ Q+ LT
Sbjct: 272 VSGKVRFPSHF-SSDLKDLLRNLLQVDLTKRF 302
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 100/240 (41%), Gaps = 44/240 (18%)
Query: 16 STYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHH- 74
S Y + +LG G S V C + A K+ + K++ +H
Sbjct: 22 SMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKI--------------INTKKLSARDHQK 67
Query: 75 -EYQNHVVKFLDHFTV------LGDNGVHACIVFEL--AGQTLSEFKSINYLNMNCMKDI 125
E + + + L H + + + G H ++F+L G+ + + Y +
Sbjct: 68 LEREARICRLLKHPNIVRLHDSISEEG-HHYLIFDLVTGGELFEDIVAREYYSEADASHC 126
Query: 126 SRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK 185
+QIL+ + + H++ +VH DLK +N+L L S+ G + L AD G A +
Sbjct: 127 IQQILEAVLHCHQM-GVVHRDLKPENLL-LASKLKGAAVKL-----------ADFGLAIE 173
Query: 186 NNAFE---FDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQH 242
+ F + + + EV+ GKPVD+W+ I Y ++ G + P ++ QH
Sbjct: 174 VEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG---YPPFWDEDQH 230
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 109/272 (40%), Gaps = 40/272 (14%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAP----KFLHITRNEVQLLKITISNHHEY 76
I+ LG G V L + E+ ++ A+K++ K + T NE ++L+
Sbjct: 33 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 85
Query: 77 QNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
N F+ ++ ++ + + G+ S + I + + + QI+ YL
Sbjct: 86 -NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 144
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H + DL++ DLK +N+L+ + + D G+A + +
Sbjct: 145 HSL-DLIYRDLKPENLLI---------------DEQGYIQVTDFGFAKRVKGRTWXLCGT 188
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
E+ A E++L K VD W+ + Y+M G + P D Q I+ +I
Sbjct: 189 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---YPPFFAD-QPIQIYEKI------- 237
Query: 257 VCNQSRLKAEFYDEDGKLLSNNVEQISLTHHL 288
V + R + F D K L N+ Q+ LT
Sbjct: 238 VSGKVRFPSHF-SSDLKDLLRNLLQVDLTKRF 268
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 109/272 (40%), Gaps = 40/272 (14%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAP----KFLHITRNEVQLLKITISNHHEY 76
I+ LG G V L + E+ ++ A+K++ K + T NE ++L+
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 98
Query: 77 QNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
N F+ ++ ++ + + G+ S + I + + + QI+ YL
Sbjct: 99 -NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H + DL++ DLK +N+L+ + + D G+A + +
Sbjct: 158 HSL-DLIYRDLKPENLLI---------------DQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
E+ A E++L K VD W+ + Y+M G + P D Q I+ +I
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---YPPFFAD-QPIQIYEKI------- 250
Query: 257 VCNQSRLKAEFYDEDGKLLSNNVEQISLTHHL 288
V + R + F D K L N+ Q+ LT
Sbjct: 251 VSGKVRFPSHF-SSDLKDLLRNLLQVDLTKRF 281
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 109/272 (40%), Gaps = 40/272 (14%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAP----KFLHITRNEVQLLKITISNHHEY 76
I+ LG G V L + E+ ++ A+K++ K + T NE ++L+
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 98
Query: 77 QNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
N F+ ++ ++ + + G+ S + I + + + QI+ YL
Sbjct: 99 -NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H + DL++ DLK +N+L+ + + D G+A + +
Sbjct: 158 HSL-DLIYRDLKPENLLI---------------DQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
E+ A E++L K VD W+ + Y+M G + P D Q I+ +I
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---YPPFFAD-QPIQIYEKI------- 250
Query: 257 VCNQSRLKAEFYDEDGKLLSNNVEQISLTHHL 288
V + R + F D K L N+ Q+ LT
Sbjct: 251 VSGKVRFPSHF-SSDLKDLLRNLLQVDLTKRF 281
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 109/272 (40%), Gaps = 40/272 (14%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAP----KFLHITRNEVQLLKITISNHHEY 76
I+ LG G V L + E+ ++ A+K++ K + T NE ++L+
Sbjct: 47 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 99
Query: 77 QNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
N F+ ++ ++ + + G+ S + I + + + QI+ YL
Sbjct: 100 -NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 158
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H + DL++ DLK +N+L+ + + D G+A + +
Sbjct: 159 HSL-DLIYRDLKPENLLI---------------DQQGYIQVTDFGFAKRVKGRTWXLCGT 202
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
E+ A E++L K VD W+ + Y+M G + P D Q I+ +I
Sbjct: 203 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---YPPFFAD-QPIQIYEKI------- 251
Query: 257 VCNQSRLKAEFYDEDGKLLSNNVEQISLTHHL 288
V + R + F D K L N+ Q+ LT
Sbjct: 252 VSGKVRFPSHF-SSDLKDLLRNLLQVDLTKRF 282
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 109/272 (40%), Gaps = 40/272 (14%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAP----KFLHITRNEVQLLKITISNHHEY 76
I+ LG G V L + E+ ++ A+K++ K + T NE ++L+
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 98
Query: 77 QNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
N F+ ++ ++ + + G+ S + I + + + QI+ YL
Sbjct: 99 -NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H + DL++ DLK +N+L+ + + D G+A + +
Sbjct: 158 HSL-DLIYRDLKPENLLI---------------DQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
E+ A E++L K VD W+ + Y+M G + P D Q I+ +I
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---YPPFFAD-QPIQIYEKI------- 250
Query: 257 VCNQSRLKAEFYDEDGKLLSNNVEQISLTHHL 288
V + R + F D K L N+ Q+ LT
Sbjct: 251 VSGKVRFPSHF-SSDLKDLLRNLLQVDLTKRF 281
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 109/272 (40%), Gaps = 40/272 (14%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAP----KFLHITRNEVQLLKITISNHHEY 76
I+ LG G V L + ET ++ A+K++ K + T NE ++L+
Sbjct: 46 IKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 98
Query: 77 QNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
N ++ ++ ++ + + G+ S + I + + + QI+ YL
Sbjct: 99 -NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H + DL++ DLK +N+L+ + + D G+A + +
Sbjct: 158 HSL-DLIYRDLKPENLLI---------------DQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
E+ A E++L K VD W+ + Y+M G + P D Q I+ +I
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---YPPFFAD-QPIQIYEKI------- 250
Query: 257 VCNQSRLKAEFYDEDGKLLSNNVEQISLTHHL 288
V + R + F D K L N+ Q+ LT
Sbjct: 251 VSGKVRFPSHF-SSDLKDLLRNLLQVDLTKRF 281
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 109/272 (40%), Gaps = 40/272 (14%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAP----KFLHITRNEVQLLKITISNHHEY 76
I+ LG G V L + ET ++ A+K++ K + T NE ++L+
Sbjct: 46 IKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 98
Query: 77 QNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
N ++ ++ ++ + + G+ S + I + + + QI+ YL
Sbjct: 99 -NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H + DL++ DLK +N+L+ + + D G+A + +
Sbjct: 158 HSL-DLIYRDLKPENLLI---------------DQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
E+ A E++L K VD W+ + Y+M G + P D Q I+ +I
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---YPPFFAD-QPIQIYEKI------- 250
Query: 257 VCNQSRLKAEFYDEDGKLLSNNVEQISLTHHL 288
V + R + F D K L N+ Q+ LT
Sbjct: 251 VSGKVRFPSHF-SSDLKDLLRNLLQVDLTKRF 281
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 21/128 (16%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNN 187
Q+L+G+ + H+ ++H DLK N+L+ + L +AD G A
Sbjct: 127 QLLRGVAHCHQ-HRILHRDLKPQNLLINSDGAL---------------KLADFGLARAFG 170
Query: 188 AFEFDY---IQAREFRAAEVVLGGK-LGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHI 243
Y + +RA +V++G K VDIWS CI +M+TG+ LF P + D +
Sbjct: 171 IPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLF-PGVTDDDQL 229
Query: 244 ERMTEILG 251
++ ILG
Sbjct: 230 PKIFSILG 237
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 21/128 (16%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNN 187
Q+L+G+ + H+ ++H DLK N+L+ + L +AD G A
Sbjct: 127 QLLRGVAHCHQ-HRILHRDLKPQNLLINSDGAL---------------KLADFGLARAFG 170
Query: 188 AFEFDY---IQAREFRAAEVVLGGK-LGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHI 243
Y + +RA +V++G K VDIWS CI +M+TG+ LF P + D +
Sbjct: 171 IPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLF-PGVTDDDQL 229
Query: 244 ERMTEILG 251
++ ILG
Sbjct: 230 PKIFSILG 237
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 101/243 (41%), Gaps = 44/243 (18%)
Query: 13 TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISN 72
++ Y + +G G S V C + T A K+ + K++ +
Sbjct: 1 SMTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKI--------------INTKKLSARD 46
Query: 73 HH--EYQNHVVKFLDHFTV------LGDNGVHACIVFEL--AGQTLSEFKSINYLNMNCM 122
H E + + + L H + + + G H +VF+L G+ + + Y +
Sbjct: 47 HQKLEREARICRLLKHSNIVRLHDSISEEGFHY-LVFDLVTGGELFEDIVAREYYSEADA 105
Query: 123 KDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGY 182
+QIL+ + + H++ +VH DLK +N+L L S+ G + L AD G
Sbjct: 106 SHCIQQILEAVLHCHQM-GVVHRDLKPENLL-LASKCKGAAVKL-----------ADFGL 152
Query: 183 AYKNNAFE---FDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLND 239
A + + F + + + EV+ GKPVDIW+ I Y ++ G + P ++
Sbjct: 153 AIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVG---YPPFWDE 209
Query: 240 FQH 242
QH
Sbjct: 210 DQH 212
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 96/229 (41%), Gaps = 36/229 (15%)
Query: 15 ISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGA---PKFLHITRNEVQLLKITIS 71
I Y + + +G G + V L ++ T VAVK++ P L EV+++KI
Sbjct: 14 IGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKIL-- 71
Query: 72 NHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILK 131
NH ++VK + + + ++ + + G+ + + + RQI+
Sbjct: 72 NHP----NIVKLFE--VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVS 125
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEF 191
+ Y H+ +VH DLK +N+L+ + IAD G++ N F
Sbjct: 126 AVQYCHQKY-IVHRDLKAENLLLDGDMNI---------------KIADFGFS---NEFTV 166
Query: 192 D-----YIQAREFRAAEVVLGGKLGKP-VDIWSTACITYQMVTGEYLFD 234
+ + + A E+ G K P VD+WS I Y +V+G FD
Sbjct: 167 GNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 94/229 (41%), Gaps = 36/229 (15%)
Query: 15 ISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGA---PKFLHITRNEVQLLKITIS 71
I Y +++ +G G + V L +I T VAVK++ L EV++ K+
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVL-- 70
Query: 72 NHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILK 131
NH ++VK + + + ++ + G+ + + RQI+
Sbjct: 71 NHP----NIVKLFE--VIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVS 124
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEF 191
+ Y H+ +VH DLK +N+L+ + IAD G++ N F F
Sbjct: 125 AVQYCHQKF-IVHRDLKAENLLLDADXNI---------------KIADFGFS---NEFTF 165
Query: 192 D-----YIQAREFRAAEVVLGGKLGKP-VDIWSTACITYQMVTGEYLFD 234
+ A + A E+ G K P VD+WS I Y +V+G FD
Sbjct: 166 GNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 109/269 (40%), Gaps = 40/269 (14%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAP----KFLHITRNEVQLLKITISNHHEY 76
I+ LG G V L + E+ ++ A+K++ K + T NE ++L+
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 98
Query: 77 QNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
N F+ ++ ++ + + G+ S + I + + + QI+ YL
Sbjct: 99 -NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H + DL++ DLK +N+L+ + + D G+A + +
Sbjct: 158 HSL-DLIYRDLKPENLLI---------------DQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
E+ A E++L K VD W+ + Y+M G + P D Q I+ +I
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---YPPFFAD-QPIQIYEKI------- 250
Query: 257 VCNQSRLKAEFYDEDGKLLSNNVEQISLT 285
V + R + F D K L N+ Q+ LT
Sbjct: 251 VSGKVRFPSHF-SSDLKDLLRNLLQVDLT 278
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 109/272 (40%), Gaps = 40/272 (14%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAP----KFLHITRNEVQLLKITISNHHEY 76
I+ LG G V L + ET ++ A+K++ K + T NE ++L+
Sbjct: 46 IKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 98
Query: 77 QNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
N ++ ++ ++ + + G+ S + I + + + QI+ YL
Sbjct: 99 -NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H + DL++ DLK +N+L+ + + D G+A + +
Sbjct: 158 HSL-DLIYRDLKPENLLI---------------DQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
E+ A E++L K VD W+ + Y+M G + P D Q I+ +I
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---YPPFFAD-QPIQIYEKI------- 250
Query: 257 VCNQSRLKAEFYDEDGKLLSNNVEQISLTHHL 288
V + R + F D K L N+ Q+ LT
Sbjct: 251 VSGKVRFPSHF-SSDLKDLLRNLLQVDLTKRF 281
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 91/222 (40%), Gaps = 34/222 (15%)
Query: 23 KLGWGFSSTVWL-CWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVV 81
KLG G VW+ WN ++ VA+K +K E Q++K HE
Sbjct: 22 KLGQGCFGEVWMGTWN--GTTRVAIKTLKPGTMSPEAFLQEAQVMK---KLRHE------ 70
Query: 82 KFLDHFTVLGDNGVHACIVFELAGQTLSEFK--SINYLNMNCMKDISRQILKGLYYLHEV 139
K + + V+ + ++ + G L K + YL + + D+S QI G+ Y+ E
Sbjct: 71 KLVQLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYV-ER 129
Query: 140 CDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQAREF 199
+ VH DL+ NILV G+ L +V AD G A E+ Q +F
Sbjct: 130 MNYVHRDLRAANILV------GENLVCKV---------ADFGLARLIEDNEYTARQGAKF 174
Query: 200 R----AAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNL 237
A E L G+ D+WS + ++ T + P +
Sbjct: 175 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 216
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 108/272 (39%), Gaps = 40/272 (14%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAP----KFLHITRNEVQLLKITISNHHEY 76
I+ LG G V L + E+ ++ A+K++ K + T NE ++L+
Sbjct: 67 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 119
Query: 77 QNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
N F+ ++ ++ + + G+ S + I + + QI+ YL
Sbjct: 120 -NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYL 178
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H + DL++ DLK +N+L+ + + D G+A + +
Sbjct: 179 HSL-DLIYRDLKPENLLI---------------DQQGYIQVTDFGFAKRVKGRTWXLCGT 222
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
E+ A E++L K VD W+ + Y+M G + P D Q I+ +I
Sbjct: 223 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---YPPFFAD-QPIQIYEKI------- 271
Query: 257 VCNQSRLKAEFYDEDGKLLSNNVEQISLTHHL 288
V + R + F D K L N+ Q+ LT
Sbjct: 272 VSGKVRFPSHF-SSDLKDLLRNLLQVDLTKRF 302
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 108/272 (39%), Gaps = 40/272 (14%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAP----KFLHITRNEVQLLKITISNHHEY 76
I+ LG G V L + E+ ++ A+K++ K + T NE ++L+
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 98
Query: 77 QNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
N F+ ++ ++ + + G+ S + I + + QI+ YL
Sbjct: 99 -NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYL 157
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H + DL++ DLK +N+L+ + + D G+A + +
Sbjct: 158 HSL-DLIYRDLKPENLLI---------------DQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
E+ A E++L K VD W+ + Y+M G + P D Q I+ +I
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---YPPFFAD-QPIQIYEKI------- 250
Query: 257 VCNQSRLKAEFYDEDGKLLSNNVEQISLTHHL 288
V + R + F D K L N+ Q+ LT
Sbjct: 251 VSGKVRFPSHF-SSDLKDLLRNLLQVDLTKRF 281
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 108/272 (39%), Gaps = 40/272 (14%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAP----KFLHITRNEVQLLKITISNHHEY 76
I+ LG G V L + E+ ++ A+K++ K + T NE ++L+
Sbjct: 41 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 93
Query: 77 QNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
N F+ ++ ++ + + G+ S + I + + QI+ YL
Sbjct: 94 -NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYL 152
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H + DL++ DLK +N+L+ + + D G+A + +
Sbjct: 153 HSL-DLIYRDLKPENLLI---------------DQQGYIQVTDFGFAKRVKGRTWXLCGT 196
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
E+ A E++L K VD W+ + Y+M G + P D Q I+ +I
Sbjct: 197 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---YPPFFAD-QPIQIYEKI------- 245
Query: 257 VCNQSRLKAEFYDEDGKLLSNNVEQISLTHHL 288
V + R + F D K L N+ Q+ LT
Sbjct: 246 VSGKVRFPSHF-SSDLKDLLRNLLQVDLTKRF 276
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 108/272 (39%), Gaps = 40/272 (14%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAP----KFLHITRNEVQLLKITISNHHEY 76
I+ LG G V L + E+ ++ A+K++ K + T NE ++L+
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 98
Query: 77 QNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
N F+ ++ ++ + + G+ S + I + + QI+ YL
Sbjct: 99 -NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYL 157
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H + DL++ DLK +N+L+ + + D G+A + +
Sbjct: 158 HSL-DLIYRDLKPENLLI---------------DQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
E+ A E++L K VD W+ + Y+M G + P D Q I+ +I
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---YPPFFAD-QPIQIYEKI------- 250
Query: 257 VCNQSRLKAEFYDEDGKLLSNNVEQISLTHHL 288
V + R + F D K L N+ Q+ LT
Sbjct: 251 VSGKVRFPSHF-SSDLKDLLRNLLQVDLTKRF 281
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 101/239 (42%), Gaps = 39/239 (16%)
Query: 8 LDIGDTLI---STYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQ 64
LD+ D + Y + +G G S V C N ET AVK++ A KF +
Sbjct: 13 LDMADDDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVA-KFTSSPGLSTE 71
Query: 65 LLKITISNHHEYQN-HVVKFLDHFTVLGD--------NGVHACIVFEL-----AGQTLSE 110
LK S H ++ H+V+ L+ ++ G +G C FE+ AG SE
Sbjct: 72 DLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLC--FEIVKRADAGFVYSE 129
Query: 111 FKSINYLNMNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYE 170
+ +Y+ RQIL+ L Y H+ +++H D+K +L+ + E + L +
Sbjct: 130 AVASHYM---------RQILEALRYCHD-NNIIHRDVKPHCVLLASKEN-SAPVKLGGFG 178
Query: 171 VLNTTNIADLGYAYKNNAFEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTG 229
V + + G + F A EVV GKPVD+W I + +++G
Sbjct: 179 V--AIQLGESGLVAGGR------VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 108/272 (39%), Gaps = 40/272 (14%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAP----KFLHITRNEVQLLKITISNHHEY 76
I+ LG G V L + E+ ++ A+K++ K + T NE ++L+
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 98
Query: 77 QNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
N F+ ++ ++ + + G+ S + I + + QI+ YL
Sbjct: 99 -NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYL 157
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H + DL++ DLK +N+L+ + + D G+A + +
Sbjct: 158 HSL-DLIYRDLKPENLLI---------------DQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
E+ A E++L K VD W+ + Y+M G + P D Q I+ +I
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---YPPFFAD-QPIQIYEKI------- 250
Query: 257 VCNQSRLKAEFYDEDGKLLSNNVEQISLTHHL 288
V + R + F D K L N+ Q+ LT
Sbjct: 251 VSGKVRFPSHF-SSDLKDLLRNLLQVDLTKRF 281
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 116/268 (43%), Gaps = 55/268 (20%)
Query: 11 GDTLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITI 70
G L S Y ++ LG G + V+ + + VA+K I + Q +K
Sbjct: 6 GFDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIK---------KIVLTDPQSVK--- 53
Query: 71 SNHHEYQNHVVKFLDH------FTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKD 124
H + +++ LDH F +LG +G + + G +L+E S+ + D
Sbjct: 54 --HALREIKIIRRLDHDNIVKVFEILGPSGSQ---LTDDVG-SLTELNSVYIVQEYMETD 107
Query: 125 ISR-----------------QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALE 167
++ Q+L+GL Y+H +++H DLK N+ + T + L L+
Sbjct: 108 LANVLEQGPLLEEHARLFMYQLLRGLKYIHS-ANVLHRDLKPANLFINTED-----LVLK 161
Query: 168 VYEVLNTTNIADLGYAYKNNAFEFDYIQAREFRAAEVVLG-GKLGKPVDIWSTACITYQM 226
+ + I D Y++K + E + + +R+ ++L K +D+W+ CI +M
Sbjct: 162 IGD-FGLARIMDPHYSHKGHLSEG--LVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEM 218
Query: 227 VTGEYLFDPNLNDFQHIERMTEILGDIP 254
+TG+ LF +E+M IL IP
Sbjct: 219 LTGKTLF----AGAHELEQMQLILESIP 242
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 108/272 (39%), Gaps = 40/272 (14%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAP----KFLHITRNEVQLLKITISNHHEY 76
I+ LG G V L + E+ ++ A+K++ K + T NE ++L+
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 98
Query: 77 QNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
N F+ ++ ++ + + G+ S + I + + QI+ YL
Sbjct: 99 -NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYL 157
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H + DL++ DLK +N+L+ + + D G+A + +
Sbjct: 158 HSL-DLIYRDLKPENLLI---------------DQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
E+ A E++L K VD W+ + Y+M G + P D Q I+ +I
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---YPPFFAD-QPIQIYEKI------- 250
Query: 257 VCNQSRLKAEFYDEDGKLLSNNVEQISLTHHL 288
V + R + F D K L N+ Q+ LT
Sbjct: 251 VSGKVRFPSHF-SSDLKDLLRNLLQVDLTKRF 281
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 94/230 (40%), Gaps = 42/230 (18%)
Query: 17 TYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEY 76
Y + +G G S V C N ET AVK++ A KF + LK S H
Sbjct: 27 VYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVA-KFTSSPGLSTEDLKREASICHML 85
Query: 77 QN-HVVKFLDHFTVLGD--------NGVHACIVFEL-----AGQTLSEFKSINYLNMNCM 122
++ H+V+ L+ ++ G +G C FE+ AG SE + +Y+
Sbjct: 86 KHPHIVELLETYSSDGMLYMVFEFMDGADLC--FEIVKRADAGFVYSEAVASHYM----- 138
Query: 123 KDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGY 182
RQIL+ L Y H+ +++H D+K +L+ + E + G
Sbjct: 139 ----RQILEALRYCHD-NNIIHRDVKPHCVLLASKENSA------------PVKLGGFGV 181
Query: 183 AYK---NNAFEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTG 229
A + + + F A EVV GKPVD+W I + +++G
Sbjct: 182 AIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 91/222 (40%), Gaps = 34/222 (15%)
Query: 23 KLGWGFSSTVWL-CWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVV 81
KLG G VW+ WN ++ VA+K +K E Q++K HE
Sbjct: 22 KLGQGCFGEVWMGTWN--GTTRVAIKTLKPGTMSPEAFLQEAQVMK---KLRHE------ 70
Query: 82 KFLDHFTVLGDNGVHACIVFELAGQTLSEFK--SINYLNMNCMKDISRQILKGLYYLHEV 139
K + + V+ + ++ + G L K + YL + + D+S QI G+ Y+ E
Sbjct: 71 KLVQLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYV-ER 129
Query: 140 CDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQAREF 199
+ VH DL+ NILV G+ L +V AD G A E+ Q +F
Sbjct: 130 MNYVHRDLRAANILV------GENLVCKV---------ADFGLARLIEDNEWTARQGAKF 174
Query: 200 R----AAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNL 237
A E L G+ D+WS + ++ T + P +
Sbjct: 175 PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 216
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 115/282 (40%), Gaps = 67/282 (23%)
Query: 12 DTLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITIS 71
+T Y + + LG G V ++IE+ A+K + P++ E+ ++K+
Sbjct: 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY---KNRELDIMKVL-- 57
Query: 72 NHHEYQNHVVKFLDHFTVLGD-------------------NGV---------------HA 97
++ N ++K +D+F GD NGV +
Sbjct: 58 ---DHVN-IIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYL 113
Query: 98 CIVFELAGQTL-----SEFKSINYLNMNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNI 152
++ E TL S +S + MN + Q+ + + ++H + + H D+K N+
Sbjct: 114 NVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSL-GICHRDIKPQNL 172
Query: 153 LVLTSETLGQKLALEVYEVLNTTNIADLGYAYK--NNAFEFDYIQAREFRAAEVVLGGKL 210
LV + + NT + D G A K + I +R +RA E++LG
Sbjct: 173 LVNSKD--------------NTLKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATE 218
Query: 211 GKP-VDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILG 251
P +D+WS C+ +++ G+ LF + R+ +I+G
Sbjct: 219 YTPSIDLWSIGCVFGELILGKPLFS-GETSIDQLVRIIQIMG 259
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 109/272 (40%), Gaps = 40/272 (14%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAP----KFLHITRNEVQLLKITISNHHEY 76
I+ LG G V L + E+ ++ A+K++ K + T NE ++L+
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 98
Query: 77 QNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
N F+ ++ ++ + + G+ S + I + + + QI+ YL
Sbjct: 99 -NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H + DL++ DLK +N+L+ + + D G+A + +
Sbjct: 158 HSL-DLIYRDLKPENLLI---------------DQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
E+ A E++L K VD W+ + Y+M G + P D + I+ +I
Sbjct: 202 PEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG---YPPFFAD-EPIQIYEKI------- 250
Query: 257 VCNQSRLKAEFYDEDGKLLSNNVEQISLTHHL 288
V + R + F D K L N+ Q+ LT
Sbjct: 251 VSGKVRFPSHF-SSDLKDLLRNLLQVDLTKRF 281
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 109/272 (40%), Gaps = 40/272 (14%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAP----KFLHITRNEVQLLKITISNHHEY 76
I+ LG G V L + E+ ++ A+K++ K + T NE ++L+
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 98
Query: 77 QNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
N F+ ++ ++ + + G+ S + I + + + QI+ YL
Sbjct: 99 -NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H + DL++ DLK +N+++ + + D G+A + +
Sbjct: 158 HSL-DLIYRDLKPENLII---------------DQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
E+ A E+++ K VD W+ + Y+M G + P D Q I+ +I
Sbjct: 202 PEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG---YPPFFAD-QPIQIYEKI------- 250
Query: 257 VCNQSRLKAEFYDEDGKLLSNNVEQISLTHHL 288
V + R + F D K L N+ Q+ LT
Sbjct: 251 VSGKVRFPSHF-SSDLKDLLRNLLQVDLTKRF 281
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 112/275 (40%), Gaps = 46/275 (16%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHV 80
I+ LG G V L + E+ ++ A+K++ ++ +++K+ H + +
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKIL-----------DKQKVVKLKQIEHTLNEKRI 94
Query: 81 VKFLD-------HFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGL 133
++ ++ F+ ++ ++ + + G+ S + I + + + QI+
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 134 YYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDY 193
YLH + DL++ DLK +N+L+ + + D G+A + +
Sbjct: 155 EYLHSL-DLIYRDLKPENLLI---------------DQQGYIQVTDFGFAKRVKGRTWXL 198
Query: 194 IQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDI 253
E A E++L K VD W+ + Y+M G + P D Q I+ +I
Sbjct: 199 CGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG---YPPFFAD-QPIQIYEKI---- 250
Query: 254 PDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHL 288
V + R + F D K L N+ Q+ LT
Sbjct: 251 ---VSGKVRFPSHF-SSDLKDLLRNLLQVDLTKRF 281
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 109/247 (44%), Gaps = 37/247 (14%)
Query: 15 ISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMK------GAPKFLHITRNEVQLLKI 68
+ Y + K+G G TV+ N ET VA+K ++ G P L +I
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVP--------SSALREI 52
Query: 69 TISNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSE-FKSINY-LNMNCMKDIS 126
+ +++N +V+ H + D + +VFE Q L + F S N L+ +K
Sbjct: 53 CLLKELKHKN-IVRL--HDVLHSDKKL--TLVFEFCDQDLKKYFDSCNGDLDPEIVKSFL 107
Query: 127 RQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKN 186
Q+LKGL + H +++H DLK N+L+ +L L + + I Y+ +
Sbjct: 108 FQLLKGLGFCHSR-NVLHRDLKPQNLLI----NRNGELKLANFGLARAFGIPVRCYSAE- 161
Query: 187 NAFEFDYIQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMV-TGEYLFDPNLNDFQHIE 244
+ +R +V+ G KL +D+WS CI ++ G LF N D Q ++
Sbjct: 162 -------VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQ-LK 213
Query: 245 RMTEILG 251
R+ +LG
Sbjct: 214 RIFRLLG 220
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 108/272 (39%), Gaps = 40/272 (14%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAP----KFLHITRNEVQLLKITISNHHEY 76
I+ LG G V L + E+ ++ A+K++ K + T NE ++L+
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------- 98
Query: 77 QNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
N F+ ++ ++ + + G+ S + I + + + QI+ YL
Sbjct: 99 -NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYL 157
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H + DL++ DLK +N+L+ + + D G+A + +
Sbjct: 158 HSL-DLIYRDLKPENLLI---------------DQQGYIQVTDFGFAKRVKGRTWXLCGT 201
Query: 197 REFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDK 256
E+ A ++L K VD W+ + Y+M G + P D Q I+ +I
Sbjct: 202 PEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG---YPPFFAD-QPIQIYEKI------- 250
Query: 257 VCNQSRLKAEFYDEDGKLLSNNVEQISLTHHL 288
V + R + F D K L N+ Q+ LT
Sbjct: 251 VSGKVRFPSHF-SSDLKDLLRNLLQVDLTKRF 281
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 95/228 (41%), Gaps = 34/228 (14%)
Query: 15 ISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHH 74
I Y I++ LG G V L ++ T VA+K++ N+ L K +
Sbjct: 13 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKII-----------NKKVLAKSDMQGRI 61
Query: 75 EYQNHVVKFLDHFTVLGDNGV-----HACIVFELAGQTLSEF-KSINYLNMNCMKDISRQ 128
E + ++ L H ++ V +V E AG L ++ + ++ + +Q
Sbjct: 62 EREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQ 121
Query: 129 ILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNA 188
I+ + Y H +VH DLK +N+L+ E L K+A +NI G K +
Sbjct: 122 IISAVEYCHR-HKIVHRDLKPENLLL--DEHLNVKIA-----DFGLSNIMTDGNFLKTSC 173
Query: 189 FEFDYIQAREFRAAEVVLGGKL--GKPVDIWSTACITYQMVTGEYLFD 234
+Y AA V+ GKL G VD+WS I Y M+ FD
Sbjct: 174 GSPNY-------AAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 95/228 (41%), Gaps = 34/228 (14%)
Query: 15 ISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHH 74
I Y I++ LG G V L ++ T VA+K++ N+ L K +
Sbjct: 7 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKII-----------NKKVLAKSDMQGRI 55
Query: 75 EYQNHVVKFLDHFTVLGDNGV-----HACIVFELAGQTLSEF-KSINYLNMNCMKDISRQ 128
E + ++ L H ++ V +V E AG L ++ + ++ + +Q
Sbjct: 56 EREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQ 115
Query: 129 ILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNA 188
I+ + Y H +VH DLK +N+L+ E L K+A +NI G K +
Sbjct: 116 IISAVEYCHR-HKIVHRDLKPENLLL--DEHLNVKIA-----DFGLSNIMTDGNFLKTSC 167
Query: 189 FEFDYIQAREFRAAEVVLGGKL--GKPVDIWSTACITYQMVTGEYLFD 234
+Y AA V+ GKL G VD+WS I Y M+ FD
Sbjct: 168 GSPNY-------AAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 95/228 (41%), Gaps = 34/228 (14%)
Query: 15 ISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHH 74
I Y I++ LG G V L ++ T VA+K++ N+ L K +
Sbjct: 3 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKII-----------NKKVLAKSDMQGRI 51
Query: 75 EYQNHVVKFLDHFTVLGDNGV-----HACIVFELAGQTLSEF-KSINYLNMNCMKDISRQ 128
E + ++ L H ++ V +V E AG L ++ + ++ + +Q
Sbjct: 52 EREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQ 111
Query: 129 ILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNA 188
I+ + Y H +VH DLK +N+L+ E L K+A +NI G K +
Sbjct: 112 IISAVEYCHR-HKIVHRDLKPENLLL--DEHLNVKIA-----DFGLSNIMTDGNFLKTSC 163
Query: 189 FEFDYIQAREFRAAEVVLGGKL--GKPVDIWSTACITYQMVTGEYLFD 234
+Y AA V+ GKL G VD+WS I Y M+ FD
Sbjct: 164 GSPNY-------AAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 95/228 (41%), Gaps = 34/228 (14%)
Query: 15 ISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHH 74
I Y I++ LG G V L ++ T VA+K++ N+ L K +
Sbjct: 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKII-----------NKKVLAKSDMQGRI 60
Query: 75 EYQNHVVKFLDHFTVLGDNGV-----HACIVFELAGQTLSEF-KSINYLNMNCMKDISRQ 128
E + ++ L H ++ V +V E AG L ++ + ++ + +Q
Sbjct: 61 EREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQ 120
Query: 129 ILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNA 188
I+ + Y H +VH DLK +N+L+ E L K+A +NI G K +
Sbjct: 121 IISAVEYCHR-HKIVHRDLKPENLLL--DEHLNVKIA-----DFGLSNIMTDGNFLKTSC 172
Query: 189 FEFDYIQAREFRAAEVVLGGKL--GKPVDIWSTACITYQMVTGEYLFD 234
+Y AA V+ GKL G VD+WS I Y M+ FD
Sbjct: 173 GSPNY-------AAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 96/239 (40%), Gaps = 33/239 (13%)
Query: 23 KLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVVK 82
K+G G + V + T VAVK M R E+ ++ I + + N VV
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMD----LRKQQRRELLFNEVVIMRDYHHDN-VVD 106
Query: 83 FLDHFTVLGDNGVHACIVFE-LAGQTLSEFKSINYLNMNCMKDISRQILKGLYYLHEVCD 141
+ V G +V E L G L++ + +N + + +L+ L YLH
Sbjct: 107 MYSSYLV----GDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHN-QG 161
Query: 142 LVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGY---AYKNNAFEFDYIQARE 198
++H D+K D+IL LTS+ ++D G+ K +
Sbjct: 162 VIHRDIKSDSIL-LTSD--------------GRIKLSDFGFCAQVSKEVPKRKXLVGTPY 206
Query: 199 FRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDKV 257
+ A EV+ G VDIWS + +M+ GE P N+ ++ M I +P +V
Sbjct: 207 WMAPEVISRLPYGTEVDIWSLGIMVIEMIDGE---PPYFNE-PPLQAMRRIRDSLPPRV 261
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 105/252 (41%), Gaps = 47/252 (18%)
Query: 15 ISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMK------GAPKFLHITRNEVQLLKI 68
+ Y + K+G G TV+ N ET VA+K ++ G P L +I
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVP--------SSALREI 52
Query: 69 TISNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSE-FKSINY-LNMNCMKDIS 126
+ +++N +V+ H + D + +VFE Q L + F S N L+ +K
Sbjct: 53 CLLKELKHKN-IVRL--HDVLHSDKKL--TLVFEFCDQDLKKYFDSCNGDLDPEIVKSFL 107
Query: 127 RQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKN 186
Q+LKGL + H +++H DLK N+L+ + L +AD G A
Sbjct: 108 FQLLKGLGFCHSR-NVLHRDLKPQNLLINRNGEL---------------KLADFGLA--- 148
Query: 187 NAFEFDY------IQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFDPNLND 239
AF + +R +V+ G KL +D+WS CI ++ P +
Sbjct: 149 RAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDV 208
Query: 240 FQHIERMTEILG 251
++R+ +LG
Sbjct: 209 DDQLKRIFRLLG 220
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 95/228 (41%), Gaps = 31/228 (13%)
Query: 13 TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAP---KFLHITRNEVQLLKIT 69
T Y I+ LG G V C + T AVKV+ A K EV+LLK
Sbjct: 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 70 ISNHHEYQNHVVKFLDHFTVLGDNGVHACIVFEL--AGQTLSEFKSINYLNMNCMKDISR 127
+H +++K F +L D+ IV EL G+ E + + I +
Sbjct: 79 --DHP----NIMKL---FEILEDSSSF-YIVGELYTGGELFDEIIKRKRFSEHDAARIIK 128
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA--YK 185
Q+ G+ Y+H+ ++VH DLK +NIL LE E I D G + ++
Sbjct: 129 QVFSGITYMHK-HNIVHRDLKPENIL------------LESKEKDCDIKIIDFGLSTCFQ 175
Query: 186 NNAFEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLF 233
N D I + A E VL G + D+WS I Y +++G F
Sbjct: 176 QNTKMKDRIGTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 100/245 (40%), Gaps = 34/245 (13%)
Query: 9 DIGDTLISTYFIIRKLGWGFSSTVWL-CWNIETSSYVAVKVMKGAPKFLHITRNEVQLLK 67
D+ + + +I++LG G VW+ WN T VA+K +K E Q++K
Sbjct: 2 DVWEIPRESLQLIKRLGNGQFGEVWMGTWNGNTK--VAIKTLKPGTMSPESFLEEAQIMK 59
Query: 68 ITISNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFK--SINYLNMNCMKDI 125
H+ K + + V+ + ++ + G L K L + + D+
Sbjct: 60 ---KLKHD------KLVQLYAVVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDM 110
Query: 126 SRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK 185
+ Q+ G+ Y+ E + +H DL+ NILV G L IAD G A
Sbjct: 111 AAQVAAGMAYI-ERMNYIHRDLRSANILV------GNGL---------ICKIADFGLARL 154
Query: 186 NNAFEFDYIQAREFR----AAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQ 241
E Q +F A E L G+ D+WS + ++VT + P +N+ +
Sbjct: 155 IEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNRE 214
Query: 242 HIERM 246
+E++
Sbjct: 215 VLEQV 219
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 135/315 (42%), Gaps = 29/315 (9%)
Query: 15 ISTYFIIRKL-GWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNH 73
IS+ F ++ L G G V + T VA+K ++ K L R L +I I H
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT---LREIKILKH 65
Query: 74 HEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGL 133
+++N + F +N I+ EL L S L+ + ++ Q L+ +
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAV 125
Query: 134 YYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDY 193
LH +++H DLK N+L+ ++ L + + +++ + AD + +Y
Sbjct: 126 KVLHG-SNVIHRDLKPSNLLINSNCDL-KVCDFGLARIIDES-AADNSEPTGQQSGMTEY 182
Query: 194 IQAREFRAAEVVL-GGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGD 252
+ R +RA EV+L K + +D+WS CI ++ +F P D++H ++ I G
Sbjct: 183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIF-PG-RDYRH--QLLLIFGI 238
Query: 253 I--P----DKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLIL 306
I P D C +S E+ + +E+ + + +G DL+
Sbjct: 239 IGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEK--MFPRVNPKGI---------DLLQ 287
Query: 307 SMLHWDSDERFTAAQ 321
ML +D +R TA +
Sbjct: 288 RMLVFDPAKRITAKE 302
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 106/249 (42%), Gaps = 34/249 (13%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQ 77
Y +++ +G G L + + + VAVK ++ K I N +K I NH +
Sbjct: 21 YELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEK---IDEN----VKREIINHRSLR 73
Query: 78 N-HVVKFLDHFTVLGDNGVHACIVFELA--GQTLSEFKSINYLNMNCMKDISRQILKGLY 134
+ ++V+F + +L H IV E A G+ + + + + +Q++ G+
Sbjct: 74 HPNIVRFKE--VIL--TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVS 129
Query: 135 YLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKN--NAFEFD 192
Y H + H DLK +N L+ S K IAD GY+ + ++
Sbjct: 130 YAH-AMQVAHRDLKLENTLLDGSPAPRLK-------------IADFGYSKASVLHSQPKS 175
Query: 193 YIQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLF-DPN--LNDFQHIERMTE 248
+ + A EV+L + GK D+WS Y M+ G Y F DP N + I R+
Sbjct: 176 AVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILN 235
Query: 249 ILGDIPDKV 257
+ IPD V
Sbjct: 236 VQYAIPDYV 244
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 105/228 (46%), Gaps = 32/228 (14%)
Query: 24 LGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVVKF 83
LG+G S TV + + VAVK M F I E++LL + + + + + +
Sbjct: 41 LGYGSSGTVVFQGSFQGRP-VAVKRM--LIDFCDIALMEIKLLTESDDHPNVIRYYCSET 97
Query: 84 LDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKD-----ISRQILKGLYYLHE 138
D F + + C L Q L E K+++ N+ K+ + RQI G+ +LH
Sbjct: 98 TDRFLYIA---LELC---NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS 151
Query: 139 VCDLVHTDLKHDNILVLTSE--TLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQ- 195
+ ++H DLK NILV TS T Q+ E +L I+D G K ++ + +
Sbjct: 152 L-KIIHRDLKPQNILVSTSSRFTADQQTGAENLRIL----ISDFGLCKKLDSGQXXFRXN 206
Query: 196 ------AREFRAAEVV---LGGKLGKPVDIWSTACITYQMVT-GEYLF 233
+RA E++ +L + +DI+S C+ Y +++ G++ F
Sbjct: 207 LNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF 254
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 105/228 (46%), Gaps = 32/228 (14%)
Query: 24 LGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVVKF 83
LG+G S TV + + VAVK M F I E++LL + + + + + +
Sbjct: 41 LGYGSSGTVVFQGSFQGRP-VAVKRM--LIDFCDIALMEIKLLTESDDHPNVIRYYCSET 97
Query: 84 LDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKD-----ISRQILKGLYYLHE 138
D F + + C L Q L E K+++ N+ K+ + RQI G+ +LH
Sbjct: 98 TDRFLYIA---LELC---NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS 151
Query: 139 VCDLVHTDLKHDNILVLTSE--TLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQ- 195
+ ++H DLK NILV TS T Q+ E +L I+D G K ++ + +
Sbjct: 152 L-KIIHRDLKPQNILVSTSSRFTADQQTGAENLRIL----ISDFGLCKKLDSGQXXFRXN 206
Query: 196 ------AREFRAAEVV---LGGKLGKPVDIWSTACITYQMVT-GEYLF 233
+RA E++ +L + +DI+S C+ Y +++ G++ F
Sbjct: 207 LNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF 254
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 101/238 (42%), Gaps = 44/238 (18%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHH--E 75
Y + +LG G S V C VKV+ G I + K++ +H E
Sbjct: 13 YQLFEELGKGAFSVVRRC----------VKVLAGQEYAAMI----INTKKLSARDHQKLE 58
Query: 76 YQNHVVKFLDHFTV------LGDNGVHACIVFEL--AGQTLSEFKSINYLNMNCMKDISR 127
+ + + L H + + + G H ++F+L G+ + + Y + +
Sbjct: 59 REARICRLLKHPNIVRLHDSISEEG-HHYLIFDLVTGGELFEDIVAREYYSEADASHCIQ 117
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNN 187
QIL+ + + H++ +VH +LK +N+L L S+ G + L AD G A +
Sbjct: 118 QILEAVLHCHQM-GVVHRNLKPENLL-LASKLKGAAVKL-----------ADFGLAIEVE 164
Query: 188 AFE---FDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQH 242
+ F + + + EV+ GKPVD+W+ I Y ++ G + P ++ QH
Sbjct: 165 GEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVG---YPPFWDEDQH 219
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 92/234 (39%), Gaps = 43/234 (18%)
Query: 13 TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAP---KFLHITRNEVQLLKIT 69
T Y I+ LG G V C + T AVKV+ A K EV+LLK
Sbjct: 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKK- 77
Query: 70 ISNHHEYQNHVVKFLDH------FTVLGDNGVHACIVFEL--AGQTLSEFKSINYLNMNC 121
LDH F +L D+ IV EL G+ E + +
Sbjct: 78 --------------LDHPNIMKLFEILEDSSSFY-IVGELYTGGELFDEIIKRKRFSEHD 122
Query: 122 MKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLG 181
I +Q+ G+ Y+H+ ++VH DLK +NIL LE E I D G
Sbjct: 123 AARIIKQVFSGITYMHK-HNIVHRDLKPENIL------------LESKEKDCDIKIIDFG 169
Query: 182 YA--YKNNAFEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLF 233
+ ++ N D I + A E VL G + D+WS I Y +++G F
Sbjct: 170 LSTCFQQNTKMKDRIGTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 59/130 (45%), Gaps = 32/130 (24%)
Query: 108 LSEFKSINYLNMNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALE 167
L E +++ YL Q L+GL YLH ++H D+K DN+L L+S+ G + AL
Sbjct: 147 LPEDRALYYLG---------QALEGLEYLHTR-RILHGDVKADNVL-LSSD--GSRAAL- 192
Query: 168 VYEVLNTTNIADLGYAY-------KNNAFEFDYIQAREFR-AAEVVLGGKLGKPVDIWST 219
D G+A + DYI E A EVV+G VDIWS+
Sbjct: 193 ----------CDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSS 242
Query: 220 ACITYQMVTG 229
C+ M+ G
Sbjct: 243 CCMMLHMLNG 252
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 119/296 (40%), Gaps = 52/296 (17%)
Query: 20 IIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQL----LKITISNHHE 75
II +LG G V+ N ETS A KV+ T++E +L ++I I +
Sbjct: 41 IIGELGDGAFGKVYKAQNKETSVLAAAKVID--------TKSEEELEDYMVEIDILASCD 92
Query: 76 YQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINY-LNMNCMKDISRQILKGLY 134
+ N +VK LD F +N + I F G + + L + ++ + +Q L L
Sbjct: 93 HPN-IVKLLDAFYY--ENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALN 149
Query: 135 YLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYI 194
YLH+ ++H DLK NIL TL + L AD G + KN I
Sbjct: 150 YLHD-NKIIHRDLKAGNILF----TLDGDIKL-----------ADFGVSAKNTR----XI 189
Query: 195 QARE-------FRAAEVVL-GGKLGKP----VDIWSTACITYQMVTGEYLFDPNLNDFQH 242
Q R+ + A EVV+ +P D+WS +M +P ++
Sbjct: 190 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAE----IEPPHHELNP 245
Query: 243 IERMTEILGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSES 298
+ + +I P + SR + F D K L NV+ T L + F +S
Sbjct: 246 MRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDS 301
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 99/244 (40%), Gaps = 48/244 (19%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSS-YVAVKVMKGAPKFLHITRNEVQLLKITISNHHEY 76
Y I+ +LG G V C T +VA + P + +NE+ ++
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMN--------- 103
Query: 77 QNHVVKFLDHFTVLGDNGVHACIVFELAGQTL-----------SEFKSINYLNMNCMKDI 125
Q H K ++ D I+ L+G L SE + INY+
Sbjct: 104 QLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYM-------- 155
Query: 126 SRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK 185
RQ +GL ++HE +VH D+K +NI+ T + ++ I D G A K
Sbjct: 156 -RQACEGLKHMHE-HSIVHLDIKPENIMCETKKA-------------SSVKIIDFGLATK 200
Query: 186 NNAFEFDYI--QAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLF--DPNLNDFQ 241
N E + EF A E+V +G D+W+ + Y +++G F + +L Q
Sbjct: 201 LNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQ 260
Query: 242 HIER 245
+++R
Sbjct: 261 NVKR 264
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 119/296 (40%), Gaps = 52/296 (17%)
Query: 20 IIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQL----LKITISNHHE 75
II +LG G V+ N ETS A KV+ T++E +L ++I I +
Sbjct: 41 IIGELGDGAFGKVYKAQNKETSVLAAAKVID--------TKSEEELEDYMVEIDILASCD 92
Query: 76 YQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINY-LNMNCMKDISRQILKGLY 134
+ N +VK LD F +N + I F G + + L + ++ + +Q L L
Sbjct: 93 HPN-IVKLLDAFYY--ENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALN 149
Query: 135 YLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYI 194
YLH+ ++H DLK NIL TL + L AD G + KN I
Sbjct: 150 YLHD-NKIIHRDLKAGNILF----TLDGDIKL-----------ADFGVSAKNTR----XI 189
Query: 195 QARE-------FRAAEVVL-GGKLGKP----VDIWSTACITYQMVTGEYLFDPNLNDFQH 242
Q R+ + A EVV+ +P D+WS +M +P ++
Sbjct: 190 QRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAE----IEPPHHELNP 245
Query: 243 IERMTEILGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSES 298
+ + +I P + SR + F D K L NV+ T L + F +S
Sbjct: 246 MRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDS 301
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 59/130 (45%), Gaps = 32/130 (24%)
Query: 108 LSEFKSINYLNMNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALE 167
L E +++ YL Q L+GL YLH ++H D+K DN+L L+S+ G + AL
Sbjct: 163 LPEDRALYYLG---------QALEGLEYLHTR-RILHGDVKADNVL-LSSD--GSRAAL- 208
Query: 168 VYEVLNTTNIADLGYAY-------KNNAFEFDYIQAREFR-AAEVVLGGKLGKPVDIWST 219
D G+A + DYI E A EVV+G VDIWS+
Sbjct: 209 ----------CDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSS 258
Query: 220 ACITYQMVTG 229
C+ M+ G
Sbjct: 259 CCMMLHMLNG 268
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 14/109 (12%)
Query: 127 RQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK- 185
+QIL G+ YLH + H DLK +NI++L + + D G A++
Sbjct: 122 KQILDGVNYLH-TKKIAHFDLKPENIMLLDKNI-----------PIPHIKLIDFGLAHEI 169
Query: 186 NNAFEFDYI-QAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLF 233
+ EF I EF A E+V LG D+WS ITY +++G F
Sbjct: 170 EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 92/234 (39%), Gaps = 43/234 (18%)
Query: 13 TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAP---KFLHITRNEVQLLKIT 69
T Y I+ LG G V C + T AVKV+ A K EV+LLK
Sbjct: 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKK- 77
Query: 70 ISNHHEYQNHVVKFLDH------FTVLGDNGVHACIVFEL--AGQTLSEFKSINYLNMNC 121
LDH F +L D+ IV EL G+ E + +
Sbjct: 78 --------------LDHPNIMKLFEILEDSSSFY-IVGELYTGGELFDEIIKRKRFSEHD 122
Query: 122 MKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLG 181
I +Q+ G+ Y+H+ ++VH DLK +NIL LE E I D G
Sbjct: 123 AARIIKQVFSGITYMHK-HNIVHRDLKPENIL------------LESKEKDCDIKIIDFG 169
Query: 182 YA--YKNNAFEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLF 233
+ ++ N D I + A E VL G + D+WS I Y +++G F
Sbjct: 170 LSTCFQQNTKMKDRIGTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 59/130 (45%), Gaps = 32/130 (24%)
Query: 108 LSEFKSINYLNMNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALE 167
L E +++ YL Q L+GL YLH ++H D+K DN+L L+S+ G + AL
Sbjct: 161 LPEDRALYYLG---------QALEGLEYLHTR-RILHGDVKADNVL-LSSD--GSRAAL- 206
Query: 168 VYEVLNTTNIADLGYAY-------KNNAFEFDYIQAREFR-AAEVVLGGKLGKPVDIWST 219
D G+A + DYI E A EVV+G VDIWS+
Sbjct: 207 ----------CDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSS 256
Query: 220 ACITYQMVTG 229
C+ M+ G
Sbjct: 257 CCMMLHMLNG 266
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 135/315 (42%), Gaps = 29/315 (9%)
Query: 15 ISTYFIIRKL-GWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNH 73
IS+ F ++ L G G V + T VA+K ++ K L R L +I I H
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT---LREIKILKH 65
Query: 74 HEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGL 133
+++N + F +N I+ EL L S L+ + ++ Q L+ +
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAV 125
Query: 134 YYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDY 193
LH +++H DLK N+L+ ++ L + + +++ + AD + ++
Sbjct: 126 KVLHG-SNVIHRDLKPSNLLINSNCDL-KVCDFGLARIIDES-AADNSEPTGQQSGMVEF 182
Query: 194 IQAREFRAAEVVL-GGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGD 252
+ R +RA EV+L K + +D+WS CI ++ +F P D++H ++ I G
Sbjct: 183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIF-PG-RDYRH--QLLLIFGI 238
Query: 253 I--P----DKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLIL 306
I P D C +S E+ + +E+ + + +G DL+
Sbjct: 239 IGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEK--MFPRVNPKGI---------DLLQ 287
Query: 307 SMLHWDSDERFTAAQ 321
ML +D +R TA +
Sbjct: 288 RMLVFDPAKRITAKE 302
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 14/109 (12%)
Query: 127 RQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK- 185
+QIL G+ YLH + H DLK +NI++L + + D G A++
Sbjct: 122 KQILDGVNYLH-TKKIAHFDLKPENIMLLDKNI-----------PIPHIKLIDFGLAHEI 169
Query: 186 NNAFEFDYI-QAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLF 233
+ EF I EF A E+V LG D+WS ITY +++G F
Sbjct: 170 EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 119/296 (40%), Gaps = 52/296 (17%)
Query: 20 IIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQL----LKITISNHHE 75
II +LG G V+ N ETS A KV+ T++E +L ++I I +
Sbjct: 41 IIGELGDGAFGKVYKAQNKETSVLAAAKVID--------TKSEEELEDYMVEIDILASCD 92
Query: 76 YQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINY-LNMNCMKDISRQILKGLY 134
+ N +VK LD F +N + I F G + + L + ++ + +Q L L
Sbjct: 93 HPN-IVKLLDAFYY--ENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALN 149
Query: 135 YLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYI 194
YLH+ ++H DLK NIL TL + L AD G + KN I
Sbjct: 150 YLHD-NKIIHRDLKAGNILF----TLDGDIKL-----------ADFGVSAKNTR----TI 189
Query: 195 QARE-------FRAAEVVL-GGKLGKP----VDIWSTACITYQMVTGEYLFDPNLNDFQH 242
Q R+ + A EVV+ +P D+WS +M +P ++
Sbjct: 190 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAE----IEPPHHELNP 245
Query: 243 IERMTEILGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSES 298
+ + +I P + SR + F D K L NV+ T L + F +S
Sbjct: 246 MRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDS 301
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 14/109 (12%)
Query: 127 RQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK- 185
+QIL G+ YLH + H DLK +NI++L + + D G A++
Sbjct: 122 KQILDGVNYLH-TKKIAHFDLKPENIMLLDKNI-----------PIPHIKLIDFGLAHEI 169
Query: 186 NNAFEFDYI-QAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLF 233
+ EF I EF A E+V LG D+WS ITY +++G F
Sbjct: 170 EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 112/263 (42%), Gaps = 46/263 (17%)
Query: 15 ISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVK--VMKGAPKFLHITR-NEVQLLKITIS 71
+S Y + K+G G V+ + +T VA+K +M+ + IT E+++L++
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL-- 74
Query: 72 NHHEYQNHVVKFLDHFTVLGD--NGVHACI--VFELAGQTLSEFKS--INYLNMNCMKDI 125
HE +VV ++ N A I VF+ L+ S + ++ +K +
Sbjct: 75 -KHE---NVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRV 130
Query: 126 SRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK 185
+ +L GLYY+H ++H D+K N+L+ L +AD G A
Sbjct: 131 MQMLLNGLYYIHR-NKILHRDMKAANVLITRDGVL---------------KLADFGLA-- 172
Query: 186 NNAFEF----------DYIQAREFRAAEVVLGGK-LGKPVDIWSTACITYQMVTGEYLFD 234
AF + + +R E++LG + G P+D+W CI +M T +
Sbjct: 173 -RAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQ 231
Query: 235 PNLNDFQHIERMTEILGDIPDKV 257
N Q + ++++ G I +V
Sbjct: 232 GNTEQHQ-LALISQLCGSITPEV 253
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 14/109 (12%)
Query: 127 RQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK- 185
+QIL G+ YLH + H DLK +NI++L + + D G A++
Sbjct: 122 KQILDGVNYLH-TKKIAHFDLKPENIMLLDKNI-----------PIPHIKLIDFGLAHEI 169
Query: 186 NNAFEFDYI-QAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLF 233
+ EF I EF A E+V LG D+WS ITY +++G F
Sbjct: 170 EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 14/109 (12%)
Query: 127 RQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK- 185
+QIL G+ YLH + H DLK +NI++L + + D G A++
Sbjct: 122 KQILDGVNYLH-TKKIAHFDLKPENIMLLDKNI-----------PIPHIKLIDFGLAHEI 169
Query: 186 NNAFEFDYI-QAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLF 233
+ EF I EF A E+V LG D+WS ITY +++G F
Sbjct: 170 EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 106/251 (42%), Gaps = 38/251 (15%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQ 77
Y +++ +G G L + +++ VAVK ++ K + E I NH +
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKRE-------IINHRSLR 73
Query: 78 N-HVVKFLDHFTVLGDNGVHACIVFELA--GQTLSEFKSINYLNMNCMKDISRQILKGLY 134
+ ++V+F + +L H IV E A G+ + + + + +Q++ G+
Sbjct: 74 HPNIVRFKE--VIL--TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVS 129
Query: 135 YLH--EVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKN--NAFE 190
Y H +VC H DLK +N L+ S K I D GY+ + ++
Sbjct: 130 YCHAMQVC---HRDLKLENTLLDGSPAPRLK-------------ICDFGYSKSSVLHSQP 173
Query: 191 FDYIQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLF-DPN--LNDFQHIERM 246
+ + A EV+L + GK D+WS Y M+ G Y F DP N + I R+
Sbjct: 174 KSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRI 233
Query: 247 TEILGDIPDKV 257
+ IPD V
Sbjct: 234 LNVQYAIPDYV 244
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 14/109 (12%)
Query: 127 RQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK- 185
+QIL G+ YLH + H DLK +NI++L + + D G A++
Sbjct: 122 KQILDGVNYLH-TKKIAHFDLKPENIMLLDKNI-----------PIPHIKLIDFGLAHEI 169
Query: 186 NNAFEFDYI-QAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLF 233
+ EF I EF A E+V LG D+WS ITY +++G F
Sbjct: 170 EDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 108/251 (43%), Gaps = 38/251 (15%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQ 77
Y +++ +G G L + +++ VAVK ++ K I N +K I NH +
Sbjct: 20 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEK---IDEN----VKREIINHRSLR 72
Query: 78 N-HVVKFLDHFTVLGDNGVHACIVFELA--GQTLSEFKSINYLNMNCMKDISRQILKGLY 134
+ ++V+F + +L H IV E A G+ + + + + +Q++ G+
Sbjct: 73 HPNIVRFKE--VIL--TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVS 128
Query: 135 YLH--EVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKN--NAFE 190
Y H +VC H DLK +N L+ S K I D GY+ + ++
Sbjct: 129 YCHAMQVC---HRDLKLENTLLDGSPAPRLK-------------ICDFGYSKSSVLHSQP 172
Query: 191 FDYIQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLF-DPN--LNDFQHIERM 246
+ + A EV+L + GK D+WS Y M+ G Y F DP N + I R+
Sbjct: 173 KSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRI 232
Query: 247 TEILGDIPDKV 257
+ IPD V
Sbjct: 233 LNVQYAIPDYV 243
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 90/234 (38%), Gaps = 37/234 (15%)
Query: 11 GDTLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITI 70
G I Y + LG G V + + T VAVK++ R +++ L +
Sbjct: 11 GRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKIL---------NRQKIRSLDVVG 61
Query: 71 SNHHEYQN-------HVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMK 123
E QN H++K + D + + + G+ L+ +
Sbjct: 62 KIRREIQNLKLFRHPHIIKLYQVISTPSD--IFMVMEYVSGGELFDYICKNGRLDEKESR 119
Query: 124 DISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA 183
+ +QIL G+ Y H +VH DLK +N+L+ + IAD G +
Sbjct: 120 RLFQQILSGVDYCHRHM-VVHRDLKPENVLL---------------DAHMNAKIADFGLS 163
Query: 184 YKNNAFEF--DYIQAREFRAAEVVLGGKLGKP-VDIWSTACITYQMVTGEYLFD 234
+ EF + + A EV+ G P VDIWS+ I Y ++ G FD
Sbjct: 164 NMMSDGEFLRXSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFD 217
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 93/230 (40%), Gaps = 39/230 (16%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGA----------PKFLHITRNEVQLLK 67
Y + LG G VW + E + V VK +K PK +T L+
Sbjct: 26 YSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVT------LE 79
Query: 68 ITISNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINY---LNMNCMKD 124
I I + E+ N ++K LD F +N +V E G L F I+ L+
Sbjct: 80 IAILSRVEHAN-IIKVLDIF----ENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASY 134
Query: 125 ISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAY 184
I RQ++ + YL + D++H D+K +NI++ T + + Y
Sbjct: 135 IFRQLVSAVGYLR-LKDIIHRDIKDENIVIAEDFT------------IKLIDFGSAAYLE 181
Query: 185 KNNAFEFDYIQAREFRAAEVVLGGKLGKP-VDIWSTACITYQMVTGEYLF 233
+ F + + E+ A EV++G P +++WS Y +V E F
Sbjct: 182 RGKLF-YTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF 230
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 58/130 (44%), Gaps = 32/130 (24%)
Query: 108 LSEFKSINYLNMNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALE 167
L E +++ YL Q L+GL YLH ++H D+K DN+L L+S+ G AL
Sbjct: 182 LPEDRALYYLG---------QALEGLEYLHSR-RILHGDVKADNVL-LSSD--GSHAAL- 227
Query: 168 VYEVLNTTNIADLGYAY-------KNNAFEFDYIQAREFR-AAEVVLGGKLGKPVDIWST 219
D G+A + DYI E A EVVLG VD+WS+
Sbjct: 228 ----------CDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSS 277
Query: 220 ACITYQMVTG 229
C+ M+ G
Sbjct: 278 CCMMLHMLNG 287
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 100/224 (44%), Gaps = 47/224 (20%)
Query: 22 RKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPK-------FLHITRNEVQLLKITIS--- 71
++LG G + V C + T A K +K + LH E+ +L++ S
Sbjct: 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILH----EIAVLELAKSCPR 90
Query: 72 --NHHE-YQN--HVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDIS 126
N HE Y+N ++ L+ + G+ +F L L+E S N + ++ I
Sbjct: 91 VINLHEVYENTSEIILILE-YAAGGE-------IFSLCLPELAEMVSEN----DVIRLI- 137
Query: 127 RQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK- 185
+QIL+G+YYLH+ ++VH DLK NIL+ + LG I D G + K
Sbjct: 138 KQILEGVYYLHQ-NNIVHLDLKPQNILLSSIYPLGD------------IKIVDFGMSRKI 184
Query: 186 NNAFEFDYIQA-REFRAAEVVLGGKLGKPVDIWSTACITYQMVT 228
+A E I E+ A E++ + D+W+ I Y ++T
Sbjct: 185 GHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLT 228
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 113/264 (42%), Gaps = 48/264 (18%)
Query: 15 ISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVK--VMKGAPKFLHITR-NEVQLLKITIS 71
+S Y + K+G G V+ + +T VA+K +M+ + IT E+++L++
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL-- 74
Query: 72 NHHEYQNHVVKFLDHFTVLGDNGVHAC-----IVFELAGQTLSEFKS--INYLNMNCMKD 124
HE +VV ++ + + C +VF+ L+ S + ++ +K
Sbjct: 75 -KHE---NVVNLIE-ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKR 129
Query: 125 ISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAY 184
+ + +L GLYY+H ++H D+K N+L+ L +AD G A
Sbjct: 130 VMQMLLNGLYYIHR-NKILHRDMKAANVLITRDGVL---------------KLADFGLA- 172
Query: 185 KNNAFEF----------DYIQAREFRAAEVVLGGK-LGKPVDIWSTACITYQMVTGEYLF 233
AF + + +R E++LG + G P+D+W CI +M T +
Sbjct: 173 --RAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIM 230
Query: 234 DPNLNDFQHIERMTEILGDIPDKV 257
N Q + ++++ G I +V
Sbjct: 231 QGNTEQHQ-LALISQLCGSITPEV 253
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 108/251 (43%), Gaps = 38/251 (15%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQ 77
Y +++ +G G L + +++ VAVK ++ K I N +K I NH +
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEK---IDEN----VKREIINHRSLR 73
Query: 78 N-HVVKFLDHFTVLGDNGVHACIVFELA--GQTLSEFKSINYLNMNCMKDISRQILKGLY 134
+ ++V+F + +L H IV E A G+ + + + + +Q++ G+
Sbjct: 74 HPNIVRFKE--VIL--TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVS 129
Query: 135 YLH--EVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKN--NAFE 190
Y H +VC H DLK +N L+ S K I GY+ + ++
Sbjct: 130 YCHAMQVC---HRDLKLENTLLDGSPAPRLK-------------ICAFGYSKSSVLHSQP 173
Query: 191 FDYIQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLF-DPN--LNDFQHIERM 246
D + + A EV+L + GK D+WS Y M+ G Y F DP N + I R+
Sbjct: 174 KDTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRI 233
Query: 247 TEILGDIPDKV 257
+ IPD V
Sbjct: 234 LNVQYAIPDYV 244
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 58/130 (44%), Gaps = 32/130 (24%)
Query: 108 LSEFKSINYLNMNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALE 167
L E +++ YL Q L+GL YLH ++H D+K DN+L L+S+ G AL
Sbjct: 163 LPEDRALYYLG---------QALEGLEYLHSR-RILHGDVKADNVL-LSSD--GSHAAL- 208
Query: 168 VYEVLNTTNIADLGYAY-------KNNAFEFDYIQAREFR-AAEVVLGGKLGKPVDIWST 219
D G+A + DYI E A EVVLG VD+WS+
Sbjct: 209 ----------CDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSS 258
Query: 220 ACITYQMVTG 229
C+ M+ G
Sbjct: 259 CCMMLHMLNG 268
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 113/264 (42%), Gaps = 48/264 (18%)
Query: 15 ISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVK--VMKGAPKFLHITR-NEVQLLKITIS 71
+S Y + K+G G V+ + +T VA+K +M+ + IT E+++L++
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL-- 73
Query: 72 NHHEYQNHVVKFLDHFTVLGDNGVHAC-----IVFELAGQTLSEFKS--INYLNMNCMKD 124
HE +VV ++ + + C +VF+ L+ S + ++ +K
Sbjct: 74 -KHE---NVVNLIE-ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKR 128
Query: 125 ISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAY 184
+ + +L GLYY+H ++H D+K N+L+ L +AD G A
Sbjct: 129 VMQMLLNGLYYIHR-NKILHRDMKAANVLITRDGVL---------------KLADFGLA- 171
Query: 185 KNNAFEF----------DYIQAREFRAAEVVLGGK-LGKPVDIWSTACITYQMVTGEYLF 233
AF + + +R E++LG + G P+D+W CI +M T +
Sbjct: 172 --RAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIM 229
Query: 234 DPNLNDFQHIERMTEILGDIPDKV 257
N Q + ++++ G I +V
Sbjct: 230 QGNTEQHQ-LALISQLCGSITPEV 252
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 138/311 (44%), Gaps = 39/311 (12%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQ 77
Y ++RKLG G S V+ NI + V VK++K + +N+++ +I I +
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP------VKKNKIK-REIKILENLRGG 91
Query: 78 NHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSI-NYLNMNCMKDISRQILKGLYYL 136
+++ D V +VFE T +FK + L ++ +ILK L Y
Sbjct: 92 PNIITLAD--IVKDPVSRTPALVFEHVNNT--DFKQLYQTLTDYDIRFYMYEILKALDYC 147
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA-YKNNAFEFD-YI 194
H + ++H D+K N+++ + +KL L D G A + + E++ +
Sbjct: 148 HSMG-IMHRDVKPHNVMI---DHEHRKLRL-----------IDWGLAEFYHPGQEYNVRV 192
Query: 195 QAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILG-- 251
+R F+ E+++ ++ +D+WS C+ M+ + F +++ + R+ ++LG
Sbjct: 193 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTE 252
Query: 252 DIPDKVCNQS-RLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSMLH 310
D+ D + + L F D G+ E+ H + + E+L F D +L
Sbjct: 253 DLYDYIDKYNIELDPRFNDILGRHSRKRWERFV---HSENQHLVSPEALDFLD---KLLR 306
Query: 311 WDSDERFTAAQ 321
+D R TA +
Sbjct: 307 YDHQSRLTARE 317
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 113/264 (42%), Gaps = 48/264 (18%)
Query: 15 ISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVK--VMKGAPKFLHITR-NEVQLLKITIS 71
+S Y + K+G G V+ + +T VA+K +M+ + IT E+++L++
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL-- 74
Query: 72 NHHEYQNHVVKFLDHFTVLGDNGVHAC-----IVFELAGQTLSEFKS--INYLNMNCMKD 124
HE +VV ++ + + C +VF+ L+ S + ++ +K
Sbjct: 75 -KHE---NVVNLIE-ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKR 129
Query: 125 ISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAY 184
+ + +L GLYY+H ++H D+K N+L+ L +AD G A
Sbjct: 130 VMQMLLNGLYYIHR-NKILHRDMKAANVLITRDGVL---------------KLADFGLA- 172
Query: 185 KNNAFEF----------DYIQAREFRAAEVVLGGK-LGKPVDIWSTACITYQMVTGEYLF 233
AF + + +R E++LG + G P+D+W CI +M T +
Sbjct: 173 --RAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIM 230
Query: 234 DPNLNDFQHIERMTEILGDIPDKV 257
N Q + ++++ G I +V
Sbjct: 231 QGNTEQHQ-LALISQLCGSITPEV 253
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 81/197 (41%), Gaps = 30/197 (15%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNN 187
Q+L+ L Y+H + + H D+K N+L+ + D G A
Sbjct: 149 QLLRSLAYIHSI-GICHRDIKPQNLLLDPPS--------------GVLKLIDFGSAKILI 193
Query: 188 AFEFDY--IQAREFRAAEVVLGG-KLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIE 244
A E + I +R +RA E++ G +DIWST C+ +++ G+ LF P + +
Sbjct: 194 AGEPNVSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLF-PGESGIDQLV 252
Query: 245 RMTEILGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDL 304
+ ++LG SR + + + + + + QI H + F DL
Sbjct: 253 EIIKVLG-------TPSREQIKTMNPN--YMEHKFPQIR--PHPFSKVFRPRTPPDAIDL 301
Query: 305 ILSMLHWDSDERFTAAQ 321
I +L + R TA +
Sbjct: 302 ISRLLEYTPSARLTAIE 318
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 105/232 (45%), Gaps = 36/232 (15%)
Query: 24 LGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVVKF 83
LG+G S TV + + VAVK M F I E++LL + + + + + +
Sbjct: 23 LGYGSSGTVVFQGSFQGRP-VAVKRM--LIDFCDIALMEIKLLTESDDHPNVIRYYCSET 79
Query: 84 LDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKD-----ISRQILKGLYYLHE 138
D F + + C L Q L E K+++ N+ K+ + RQI G+ +LH
Sbjct: 80 TDRFLYIA---LELC---NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS 133
Query: 139 VCDLVHTDLKHDNILVLTSE--TLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQ- 195
+ ++H DLK NILV TS T Q+ E +L I+D G K ++ + +
Sbjct: 134 L-KIIHRDLKPQNILVSTSSRFTADQQTGAENLRIL----ISDFGLCKKLDSGQXXFRXN 188
Query: 196 ------AREFRAAEVV-------LGGKLGKPVDIWSTACITYQMVT-GEYLF 233
+RA E++ +L + +DI+S C+ Y +++ G++ F
Sbjct: 189 LNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF 240
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 15/136 (11%)
Query: 108 LSEFKSINYLNMNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALE 167
L++F++ L ++ + I L YLHE ++H DLK +NI++ Q+L
Sbjct: 109 LNQFENCCGLKEGPIRTLLSDISSALRYLHE-NRIIHRDLKPENIVLQPGP---QRL--- 161
Query: 168 VYEVLNTTNIADLGYAYKNNAFEF--DYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQ 225
I DLGYA + + E +++ ++ A E++ K VD WS + ++
Sbjct: 162 ------IHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFE 215
Query: 226 MVTGEYLFDPNLNDFQ 241
+TG F PN Q
Sbjct: 216 CITGFRPFLPNWQPVQ 231
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 105/232 (45%), Gaps = 36/232 (15%)
Query: 24 LGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVVKF 83
LG+G S TV + + VAVK M F I E++LL + + + + + +
Sbjct: 23 LGYGSSGTVVFQGSFQGRP-VAVKRM--LIDFCDIALMEIKLLTESDDHPNVIRYYCSET 79
Query: 84 LDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKD-----ISRQILKGLYYLHE 138
D F + + C L Q L E K+++ N+ K+ + RQI G+ +LH
Sbjct: 80 TDRFLYIA---LELC---NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS 133
Query: 139 VCDLVHTDLKHDNILVLTSE--TLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQ- 195
+ ++H DLK NILV TS T Q+ E +L I+D G K ++ + +
Sbjct: 134 L-KIIHRDLKPQNILVSTSSRFTADQQTGAENLRIL----ISDFGLCKKLDSGQSSFRTN 188
Query: 196 ------AREFRAAEVV-------LGGKLGKPVDIWSTACITYQMVT-GEYLF 233
+RA E++ +L + +DI+S C+ Y +++ G++ F
Sbjct: 189 LNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF 240
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 15/136 (11%)
Query: 108 LSEFKSINYLNMNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALE 167
L++F++ L ++ + I L YLHE ++H DLK +NI++ Q+L
Sbjct: 110 LNQFENCCGLKEGPIRTLLSDISSALRYLHE-NRIIHRDLKPENIVLQPGP---QRL--- 162
Query: 168 VYEVLNTTNIADLGYAYKNNAFEF--DYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQ 225
I DLGYA + + E +++ ++ A E++ K VD WS + ++
Sbjct: 163 ------IHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFE 216
Query: 226 MVTGEYLFDPNLNDFQ 241
+TG F PN Q
Sbjct: 217 CITGFRPFLPNWQPVQ 232
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 91/212 (42%), Gaps = 24/212 (11%)
Query: 22 RKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVV 81
R LG G V LC + T AVKV+ + T E L ++ + ++ N ++
Sbjct: 32 RVLGKGSFGEVILCKDKITGQECAVKVI-SKRQVKQKTDKESLLREVQLLKQLDHPN-IM 89
Query: 82 KFLDHFTVLGDNGVHACIVFEL--AGQTLSEFKSINYLNMNCMKDISRQILKGLYYLHEV 139
K + F D G + +V E+ G+ E S + I RQ+L G+ Y+H+
Sbjct: 90 KLYEFFE---DKG-YFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHK- 144
Query: 140 CDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA--YKNNAFEFDYIQAR 197
+VH DLK +N+L LE I D G + ++ + D I
Sbjct: 145 NKIVHRDLKPENLL------------LESKSKDANIRIIDFGLSTHFEASKKMKDKIGTA 192
Query: 198 EFRAAEVVLGGKLGKPVDIWSTACITYQMVTG 229
+ A E VL G + D+WST I Y +++G
Sbjct: 193 YYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 60/127 (47%), Gaps = 20/127 (15%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKN- 186
IL GL+ LHE +VH DL NIL+ + N I D A ++
Sbjct: 142 HILLGLHVLHE-AGVVHRDLHPGNILLADN---------------NDITICDFNLAREDT 185
Query: 187 -NAFEFDYIQAREFRAAEVVLGGK-LGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIE 244
+A + Y+ R +RA E+V+ K K VD+WS C+ +M + LF + + +
Sbjct: 186 ADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGS-TFYNQLN 244
Query: 245 RMTEILG 251
++ E++G
Sbjct: 245 KIVEVVG 251
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 60/127 (47%), Gaps = 20/127 (15%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKN- 186
IL GL+ LHE +VH DL NIL+ + N I D A ++
Sbjct: 142 HILLGLHVLHE-AGVVHRDLHPGNILLADN---------------NDITICDFNLAREDT 185
Query: 187 -NAFEFDYIQAREFRAAEVVLGGK-LGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIE 244
+A + Y+ R +RA E+V+ K K VD+WS C+ +M + LF + + +
Sbjct: 186 ADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGS-TFYNQLN 244
Query: 245 RMTEILG 251
++ E++G
Sbjct: 245 KIVEVVG 251
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 91/212 (42%), Gaps = 24/212 (11%)
Query: 22 RKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVV 81
R LG G V LC + T AVKV+ + T E L ++ + ++ N ++
Sbjct: 55 RVLGKGSFGEVILCKDKITGQECAVKVI-SKRQVKQKTDKESLLREVQLLKQLDHPN-IM 112
Query: 82 KFLDHFTVLGDNGVHACIVFEL--AGQTLSEFKSINYLNMNCMKDISRQILKGLYYLHEV 139
K + F D G + +V E+ G+ E S + I RQ+L G+ Y+H+
Sbjct: 113 KLYEFFE---DKG-YFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHK- 167
Query: 140 CDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA--YKNNAFEFDYIQAR 197
+VH DLK +N+L LE I D G + ++ + D I
Sbjct: 168 NKIVHRDLKPENLL------------LESKSKDANIRIIDFGLSTHFEASKKMKDKIGTA 215
Query: 198 EFRAAEVVLGGKLGKPVDIWSTACITYQMVTG 229
+ A E VL G + D+WST I Y +++G
Sbjct: 216 YYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 104/227 (45%), Gaps = 21/227 (9%)
Query: 17 TYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEY 76
Y I +G G V+L ++ T VA+K + F + + L +ITI N +
Sbjct: 27 NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRM--FEDLIDCKRILREITILNRLK- 83
Query: 77 QNHVVKFLDHFTVLGDNGV---HACIVFELAGQTLSE-FKSINYLNMNCMKDISRQILKG 132
+++++ D ++ D+ + IV E+A L + FK+ +L +K I +L G
Sbjct: 84 SDYIIRLYD--LIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLG 141
Query: 133 LYYLHEVCDLVHTDLKHDNILV---LTSETLGQKLALEVYEVLNTTNIADL------GYA 183
++HE ++H DLK N L+ + + LA + +T + DL G
Sbjct: 142 ENFIHE-SGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPH 200
Query: 184 YKNNAFEF-DYIQAREFRAAEVVL-GGKLGKPVDIWSTACITYQMVT 228
KN + ++ R +RA E++L K +DIWST CI +++
Sbjct: 201 NKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLN 247
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 91/212 (42%), Gaps = 24/212 (11%)
Query: 22 RKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVV 81
R LG G V LC + T AVKV+ + T E L ++ + ++ N ++
Sbjct: 56 RVLGKGSFGEVILCKDKITGQECAVKVI-SKRQVKQKTDKESLLREVQLLKQLDHPN-IM 113
Query: 82 KFLDHFTVLGDNGVHACIVFEL--AGQTLSEFKSINYLNMNCMKDISRQILKGLYYLHEV 139
K + F D G + +V E+ G+ E S + I RQ+L G+ Y+H+
Sbjct: 114 KLYEFFE---DKG-YFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHK- 168
Query: 140 CDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA--YKNNAFEFDYIQAR 197
+VH DLK +N+L LE I D G + ++ + D I
Sbjct: 169 NKIVHRDLKPENLL------------LESKSKDANIRIIDFGLSTHFEASKKMKDKIGTA 216
Query: 198 EFRAAEVVLGGKLGKPVDIWSTACITYQMVTG 229
+ A E VL G + D+WST I Y +++G
Sbjct: 217 YYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 115/275 (41%), Gaps = 34/275 (12%)
Query: 20 IIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLK-ITISNHHEYQN 78
I R LG G V+L ++ +A+KV+ A L E QL + + I +H + N
Sbjct: 13 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPN 70
Query: 79 HVVKFLDHFTVLGDNGVHACIVFELA--GQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
+++ +F + ++ E A G E + ++ + ++ L Y
Sbjct: 71 -ILRLYGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 125
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA-YKNNAFEFDYIQ 195
H ++H D+K +N+L+ ++ L IAD G++ + ++ D
Sbjct: 126 HSK-RVIHRDIKPENLLLGSAGEL---------------KIADFGWSVHAPSSRRTDLCG 169
Query: 196 AREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPD 255
++ E++ G + VD+WS + Y+ + G+ F+ N + +R++ + PD
Sbjct: 170 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ-ETYKRISRVEFTFPD 228
Query: 256 KVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQE 290
V +R D +LL +N Q + + E
Sbjct: 229 FVTEGAR------DLISRLLKHNPSQRPMLREVLE 257
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 115/275 (41%), Gaps = 34/275 (12%)
Query: 20 IIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLK-ITISNHHEYQN 78
I R LG G V+L ++ +A+KV+ A L E QL + + I +H + N
Sbjct: 17 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPN 74
Query: 79 HVVKFLDHFTVLGDNGVHACIVFELA--GQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
+++ +F + ++ E A G E + ++ + ++ L Y
Sbjct: 75 -ILRLYGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 129
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA-YKNNAFEFDYIQ 195
H ++H D+K +N+L+ ++ L IAD G++ + ++ D
Sbjct: 130 HSK-RVIHRDIKPENLLLGSAGEL---------------KIADFGWSVHAPSSRRTDLCG 173
Query: 196 AREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPD 255
++ E++ G + VD+WS + Y+ + G+ F+ N + +R++ + PD
Sbjct: 174 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ-ETYKRISRVEFTFPD 232
Query: 256 KVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQE 290
V +R D +LL +N Q + + E
Sbjct: 233 FVTEGAR------DLISRLLKHNPSQRPMLREVLE 261
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 115/275 (41%), Gaps = 34/275 (12%)
Query: 20 IIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLK-ITISNHHEYQN 78
I R LG G V+L ++ +A+KV+ A L E QL + + I +H + N
Sbjct: 12 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPN 69
Query: 79 HVVKFLDHFTVLGDNGVHACIVFELA--GQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
+++ +F + ++ E A G E + ++ + ++ L Y
Sbjct: 70 -ILRLYGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA-YKNNAFEFDYIQ 195
H ++H D+K +N+L+ ++ L IAD G++ + ++ D
Sbjct: 125 HSK-RVIHRDIKPENLLLGSAGEL---------------KIADFGWSVHAPSSRRTDLCG 168
Query: 196 AREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPD 255
++ E++ G + VD+WS + Y+ + G+ F+ N + +R++ + PD
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ-ETYKRISRVEFTFPD 227
Query: 256 KVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQE 290
V +R D +LL +N Q + + E
Sbjct: 228 FVTEGAR------DLISRLLKHNPSQRPMLREVLE 256
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 115/275 (41%), Gaps = 34/275 (12%)
Query: 20 IIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLK-ITISNHHEYQN 78
I R LG G V+L ++ +A+KV+ A L E QL + + I +H + N
Sbjct: 12 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPN 69
Query: 79 HVVKFLDHFTVLGDNGVHACIVFELA--GQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
+++ +F + ++ E A G E + ++ + ++ L Y
Sbjct: 70 -ILRLYGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA-YKNNAFEFDYIQ 195
H ++H D+K +N+L+ ++ L IAD G++ + ++ D
Sbjct: 125 HSK-RVIHRDIKPENLLLGSAGEL---------------KIADFGWSVHAPSSRRTDLCG 168
Query: 196 AREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPD 255
++ E++ G + VD+WS + Y+ + G+ F+ N + +R++ + PD
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ-ETYKRISRVEFTFPD 227
Query: 256 KVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQE 290
V +R D +LL +N Q + + E
Sbjct: 228 FVTEGAR------DLISRLLKHNPSQRPMLREVLE 256
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 106/250 (42%), Gaps = 36/250 (14%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVK-VMKGAPKFLHITRNEVQLLKITISNHHEY 76
Y ++ +G G L + T VAVK + +GA ++ R I NH
Sbjct: 22 YDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQRE--------IINHRSL 73
Query: 77 QN-HVVKFLDHFTVLGDNGVHACIVFELA--GQTLSEFKSINYLNMNCMKDISRQILKGL 133
++ ++V+F + +L H I+ E A G+ + + + + +Q+L G+
Sbjct: 74 RHPNIVRFKE--VIL--TPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGV 129
Query: 134 YYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKN--NAFEF 191
Y H + + H DLK +N L+ S K I D GY+ + ++
Sbjct: 130 SYCHSM-QICHRDLKLENTLLDGSPAPRLK-------------ICDFGYSKSSVLHSQPK 175
Query: 192 DYIQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLF-DP-NLNDFQH-IERMT 247
+ + A EV+L + GK D+WS Y M+ G Y F DP D++ I+R+
Sbjct: 176 STVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRIL 235
Query: 248 EILGDIPDKV 257
+ IPD +
Sbjct: 236 SVKYSIPDDI 245
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 115/275 (41%), Gaps = 34/275 (12%)
Query: 20 IIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLK-ITISNHHEYQN 78
I R LG G V+L ++ +A+KV+ A L E QL + + I +H + N
Sbjct: 15 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPN 72
Query: 79 HVVKFLDHFTVLGDNGVHACIVFELA--GQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
+++ +F + ++ E A G E + ++ + ++ L Y
Sbjct: 73 -ILRLYGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 127
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA-YKNNAFEFDYIQ 195
H ++H D+K +N+L+ ++ L IAD G++ + ++ D
Sbjct: 128 HSK-RVIHRDIKPENLLLGSAGEL---------------KIADFGWSVHAPSSRRDDLCG 171
Query: 196 AREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPD 255
++ E++ G + VD+WS + Y+ + G+ F+ N + +R++ + PD
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ-ETYKRISRVEFTFPD 230
Query: 256 KVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQE 290
V +R D +LL +N Q + + E
Sbjct: 231 FVTEGAR------DLISRLLKHNPSQRPMLREVLE 259
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 83/218 (38%), Gaps = 26/218 (11%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHV 80
++ LG G V L T Y A+K++K K + + ++EV T++ + QN
Sbjct: 14 LKLLGKGTFGKVILVKEKATGRYYAMKILK---KEVIVAKDEVAH---TLTENRVLQNSR 67
Query: 81 VKFLDHFTVLGDNGVHACIVFELA--GQTLSEFKSINYLNMNCMKDISRQILKGLYYLHE 138
FL C V E A G+ + + + +I+ L YLH
Sbjct: 68 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHS 127
Query: 139 VCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGY---AYKNNAFEFDYIQ 195
++V+ DLK +N+++ I D G K+ A +
Sbjct: 128 EKNVVYRDLKLENLMLDKD---------------GHIKITDFGLCKEGIKDGATMKXFCG 172
Query: 196 AREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLF 233
E+ A EV+ G+ VD W + Y+M+ G F
Sbjct: 173 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 134/315 (42%), Gaps = 29/315 (9%)
Query: 15 ISTYFIIRKL-GWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNH 73
IS+ F ++ L G G V + T VA+K ++ K L R L +I I H
Sbjct: 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT---LREIKILKH 65
Query: 74 HEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGL 133
+++N + F +N I+ EL L S L+ + ++ Q L+ +
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAV 125
Query: 134 YYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDY 193
LH +++H DLK N+L+ ++ L + + +++ + AD + +
Sbjct: 126 KVLHG-SNVIHRDLKPSNLLINSNCDL-KVCDFGLARIIDES-AADNSEPTGQQSGMTEX 182
Query: 194 IQAREFRAAEVVL-GGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGD 252
+ R +RA EV+L K + +D+WS CI ++ +F P D++H ++ I G
Sbjct: 183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIF-PG-RDYRH--QLLLIFGI 238
Query: 253 I--P----DKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLIL 306
I P D C +S E+ + +E+ + + +G DL+
Sbjct: 239 IGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEK--MFPRVNPKGI---------DLLQ 287
Query: 307 SMLHWDSDERFTAAQ 321
ML +D +R TA +
Sbjct: 288 RMLVFDPAKRITAKE 302
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 83/218 (38%), Gaps = 26/218 (11%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHV 80
++ LG G V L T Y A+K++K K + + ++EV T++ + QN
Sbjct: 15 LKLLGKGTFGKVILVKEKATGRYYAMKILK---KEVIVAKDEVAH---TLTENRVLQNSR 68
Query: 81 VKFLDHFTVLGDNGVHACIVFELA--GQTLSEFKSINYLNMNCMKDISRQILKGLYYLHE 138
FL C V E A G+ + + + +I+ L YLH
Sbjct: 69 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHS 128
Query: 139 VCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGY---AYKNNAFEFDYIQ 195
++V+ DLK +N+++ I D G K+ A +
Sbjct: 129 EKNVVYRDLKLENLMLDKD---------------GHIKITDFGLCKEGIKDGATMKXFCG 173
Query: 196 AREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLF 233
E+ A EV+ G+ VD W + Y+M+ G F
Sbjct: 174 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 211
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 84/215 (39%), Gaps = 20/215 (9%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHV 80
++ LG G V L T Y A+K++K K + + ++EV T++ + QN
Sbjct: 13 LKLLGKGTFGKVILVKEKATGRYYAMKILK---KEVIVAKDEVAH---TLTENRVLQNSR 66
Query: 81 VKFLDHFTVLGDNGVHACIVFELA--GQTLSEFKSINYLNMNCMKDISRQILKGLYYLHE 138
FL C V E A G+ + + + +I+ L YLH
Sbjct: 67 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHS 126
Query: 139 VCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQARE 198
++V+ DLK +N++ L+ + T+ K+ A + E
Sbjct: 127 EKNVVYRDLKLENLM------------LDKDGHIKITDFGLCKEGIKDGATMKXFCGTPE 174
Query: 199 FRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLF 233
+ A EV+ G+ VD W + Y+M+ G F
Sbjct: 175 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 209
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 91/212 (42%), Gaps = 24/212 (11%)
Query: 22 RKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVV 81
R LG G V LC + T AVKV+ + T E L ++ + ++ N ++
Sbjct: 38 RVLGKGSFGEVILCKDKITGQECAVKVI-SKRQVKQKTDKESLLREVQLLKQLDHPN-IM 95
Query: 82 KFLDHFTVLGDNGVHACIVFEL--AGQTLSEFKSINYLNMNCMKDISRQILKGLYYLHEV 139
K + F D G + +V E+ G+ E S + I RQ+L G+ Y+H+
Sbjct: 96 KLYEFFE---DKG-YFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHK- 150
Query: 140 CDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA--YKNNAFEFDYIQAR 197
+VH DLK +N+L LE I D G + ++ + D I
Sbjct: 151 NKIVHRDLKPENLL------------LESKSKDANIRIIDFGLSTHFEASKKMKDKIGTA 198
Query: 198 EFRAAEVVLGGKLGKPVDIWSTACITYQMVTG 229
+ A E VL G + D+WST I Y +++G
Sbjct: 199 YYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 115/310 (37%), Gaps = 67/310 (21%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQ 77
Y + +G G S C + T+ AVK++ + R+ + ++I + Y
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKS------KRDPTEEIEILL----RYG 73
Query: 78 NH--VVKFLDHFTVLGDNGVHACIVFEL--AGQTLSEFKSINYLNMNCMKDISRQILKGL 133
H ++ D + D+G + +V EL G+ L + + + + I K +
Sbjct: 74 QHPNIITLKDVY----DDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTV 129
Query: 134 YYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK---NNAFE 190
YLH +VH DLK NIL + + + I D G+A + N
Sbjct: 130 EYLH-AQGVVHRDLKPSNILYVDESGNPESI-----------RICDFGFAKQLRAENGLL 177
Query: 191 FDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEIL 250
F A EV+ DIWS + Y M+TG + P N
Sbjct: 178 MTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG---YTPFANGPD--------- 225
Query: 251 GDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSMLH 310
D P+++ +R+ + + G G+ S S T DL+ MLH
Sbjct: 226 -DTPEEIL--ARIGSGKFSLSG-------------------GYWNSVSDTAKDLVSKMLH 263
Query: 311 WDSDERFTAA 320
D +R TAA
Sbjct: 264 VDPHQRLTAA 273
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 111/275 (40%), Gaps = 33/275 (12%)
Query: 23 KLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVVK 82
K+G G + V + + VAVK M R E+ ++ I ++++N VV+
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMD----LRKQQRRELLFNEVVIMRDYQHEN-VVE 85
Query: 83 FLDHFTVLGDNGVHACIVFE-LAGQTLSEFKSINYLNMNCMKDISRQILKGLYYLHEVCD 141
+ + V G +V E L G L++ + +N + + +L+ L LH
Sbjct: 86 MYNSYLV----GDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLH-AQG 140
Query: 142 LVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGY---AYKNNAFEFDYIQARE 198
++H D+K D+IL LT + ++D G+ K +
Sbjct: 141 VIHRDIKSDSIL-LTHD--------------GRVKLSDFGFCAQVSKEVPRRKXLVGTPY 185
Query: 199 FRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDKVC 258
+ A E++ G VDIWS + +MV GE P N+ ++ M I ++P ++
Sbjct: 186 WMAPELISRLPYGPEVDIWSLGIMVIEMVDGE---PPYFNE-PPLKAMKMIRDNLPPRLK 241
Query: 259 NQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGF 293
N ++ +LL + Q + L + F
Sbjct: 242 NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPF 276
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 111/275 (40%), Gaps = 33/275 (12%)
Query: 23 KLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVVK 82
K+G G + V + + VAVK M R E+ ++ I ++++N VV+
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMD----LRKQQRRELLFNEVVIMRDYQHEN-VVE 81
Query: 83 FLDHFTVLGDNGVHACIVFE-LAGQTLSEFKSINYLNMNCMKDISRQILKGLYYLHEVCD 141
+ + V G +V E L G L++ + +N + + +L+ L LH
Sbjct: 82 MYNSYLV----GDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLH-AQG 136
Query: 142 LVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGY---AYKNNAFEFDYIQARE 198
++H D+K D+IL LT + ++D G+ K +
Sbjct: 137 VIHRDIKSDSIL-LTHD--------------GRVKLSDFGFCAQVSKEVPRRKXLVGTPY 181
Query: 199 FRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDKVC 258
+ A E++ G VDIWS + +MV GE P N+ ++ M I ++P ++
Sbjct: 182 WMAPELISRLPYGPEVDIWSLGIMVIEMVDGE---PPYFNE-PPLKAMKMIRDNLPPRLK 237
Query: 259 NQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGF 293
N ++ +LL + Q + L + F
Sbjct: 238 NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPF 272
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 111/275 (40%), Gaps = 33/275 (12%)
Query: 23 KLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVVK 82
K+G G + V + + VAVK M R E+ ++ I ++++N VV+
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMD----LRKQQRRELLFNEVVIMRDYQHEN-VVE 92
Query: 83 FLDHFTVLGDNGVHACIVFE-LAGQTLSEFKSINYLNMNCMKDISRQILKGLYYLHEVCD 141
+ + V G +V E L G L++ + +N + + +L+ L LH
Sbjct: 93 MYNSYLV----GDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLH-AQG 147
Query: 142 LVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGY---AYKNNAFEFDYIQARE 198
++H D+K D+IL LT + ++D G+ K +
Sbjct: 148 VIHRDIKSDSIL-LTHD--------------GRVKLSDFGFCAQVSKEVPRRKXLVGTPY 192
Query: 199 FRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDKVC 258
+ A E++ G VDIWS + +MV GE P N+ ++ M I ++P ++
Sbjct: 193 WMAPELISRLPYGPEVDIWSLGIMVIEMVDGE---PPYFNE-PPLKAMKMIRDNLPPRLK 248
Query: 259 NQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGF 293
N ++ +LL + Q + L + F
Sbjct: 249 NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPF 283
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 111/275 (40%), Gaps = 33/275 (12%)
Query: 23 KLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVVK 82
K+G G + V + + VAVK M R E+ ++ I ++++N VV+
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMD----LRKQQRRELLFNEVVIMRDYQHEN-VVE 90
Query: 83 FLDHFTVLGDNGVHACIVFE-LAGQTLSEFKSINYLNMNCMKDISRQILKGLYYLHEVCD 141
+ + V G +V E L G L++ + +N + + +L+ L LH
Sbjct: 91 MYNSYLV----GDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLH-AQG 145
Query: 142 LVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGY---AYKNNAFEFDYIQARE 198
++H D+K D+IL LT + ++D G+ K +
Sbjct: 146 VIHRDIKSDSIL-LTHD--------------GRVKLSDFGFCAQVSKEVPRRKXLVGTPY 190
Query: 199 FRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDKVC 258
+ A E++ G VDIWS + +MV GE P N+ ++ M I ++P ++
Sbjct: 191 WMAPELISRLPYGPEVDIWSLGIMVIEMVDGE---PPYFNE-PPLKAMKMIRDNLPPRLK 246
Query: 259 NQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGF 293
N ++ +LL + Q + L + F
Sbjct: 247 NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPF 281
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/313 (20%), Positives = 115/313 (36%), Gaps = 38/313 (12%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKV--MKGAPKFLHITRNEVQLLKITISNHHEYQN 78
I +LG G V+ + + +A K+ ++ P + E+Q+L H
Sbjct: 11 ISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL------HECNSP 64
Query: 79 HVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYLHE 138
++V F F D + C+ G K + + +S ++KGL YL E
Sbjct: 65 YIVGFYGAF--YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 139 VCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK-NNAFEFDYIQAR 197
++H D+K NILV + + + D G + + ++ ++ R
Sbjct: 123 KHKIMHRDVKPSNILVNSRGEI---------------KLCDFGVSGQLIDSMANSFVGTR 167
Query: 198 EFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDKV 257
+ + E + G DIWS +M G Y P D + R + ++ D +
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP--PDAKEDSRPPMAIFELLDYI 225
Query: 258 CNQSRLK-------AEFYDEDGKLLSNNVEQISLTHHLQERGF---SKSESLTFSDLILS 307
N+ K EF D K L N + + L F S +E + F+ + S
Sbjct: 226 VNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEVDFAGWLCS 285
Query: 308 MLHWDSDERFTAA 320
+ + T A
Sbjct: 286 TIGLNQPSTPTHA 298
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 88/212 (41%), Gaps = 24/212 (11%)
Query: 22 RKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVV 81
R LG G V LC + T AVKV+ + T E L ++ + ++ N +
Sbjct: 32 RVLGKGSFGEVILCKDKITGQECAVKVI-SKRQVKQKTDKESLLREVQLLKQLDHPN-IX 89
Query: 82 KFLDHFTVLGDNGVHACIVFEL--AGQTLSEFKSINYLNMNCMKDISRQILKGLYYLHEV 139
K + F G + +V E+ G+ E S + I RQ+L G+ Y H+
Sbjct: 90 KLYEFFEDKG----YFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHK- 144
Query: 140 CDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA--YKNNAFEFDYIQAR 197
+VH DLK +N+L LE I D G + ++ + D I
Sbjct: 145 NKIVHRDLKPENLL------------LESKSKDANIRIIDFGLSTHFEASKKXKDKIGTA 192
Query: 198 EFRAAEVVLGGKLGKPVDIWSTACITYQMVTG 229
+ A E VL G + D+WST I Y +++G
Sbjct: 193 YYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 84/215 (39%), Gaps = 20/215 (9%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHV 80
++ LG G V L T Y A+K++K K + + ++EV T++ + QN
Sbjct: 153 LKLLGKGTFGKVILVKEKATGRYYAMKILK---KEVIVAKDEVAH---TLTENRVLQNSR 206
Query: 81 VKFLDHFTVLGDNGVHACIVFELA--GQTLSEFKSINYLNMNCMKDISRQILKGLYYLHE 138
FL C V E A G+ + + + +I+ L YLH
Sbjct: 207 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHS 266
Query: 139 VCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQARE 198
++V+ DLK +N++ L+ + T+ K+ A + E
Sbjct: 267 EKNVVYRDLKLENLM------------LDKDGHIKITDFGLCKEGIKDGATMKTFCGTPE 314
Query: 199 FRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLF 233
+ A EV+ G+ VD W + Y+M+ G F
Sbjct: 315 YLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 349
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 83/218 (38%), Gaps = 26/218 (11%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHV 80
++ LG G V L T Y A+K++K K + + ++EV T++ + QN
Sbjct: 156 LKLLGKGTFGKVILVKEKATGRYYAMKILK---KEVIVAKDEVAH---TLTENRVLQNSR 209
Query: 81 VKFLDHFTVLGDNGVHACIVFELA--GQTLSEFKSINYLNMNCMKDISRQILKGLYYLHE 138
FL C V E A G+ + + + +I+ L YLH
Sbjct: 210 HPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHS 269
Query: 139 VCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGY---AYKNNAFEFDYIQ 195
++V+ DLK +N+++ I D G K+ A +
Sbjct: 270 EKNVVYRDLKLENLMLDKD---------------GHIKITDFGLCKEGIKDGATMKTFCG 314
Query: 196 AREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLF 233
E+ A EV+ G+ VD W + Y+M+ G F
Sbjct: 315 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 352
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/295 (20%), Positives = 108/295 (36%), Gaps = 30/295 (10%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKV--MKGAPKFLHITRNEVQLLKITISNHHEYQN 78
I +LG G V+ + + +A K+ ++ P + E+Q+L H
Sbjct: 30 ISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL------HECNSP 83
Query: 79 HVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYLHE 138
++V F F D + C+ G K + + +S ++KGL YL E
Sbjct: 84 YIVGFYGAF--YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 141
Query: 139 VCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK-NNAFEFDYIQAR 197
++H D+K NILV + + D G + + ++ ++ R
Sbjct: 142 KHKIMHRDVKPSNILVNSR---------------GEIKLCDFGVSGQLIDSMANSFVGTR 186
Query: 198 EFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDKV 257
+ + E + G DIWS +M G Y E + I+ + P K+
Sbjct: 187 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKL 246
Query: 258 CNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGF---SKSESLTFSDLILSML 309
+ EF D K L N + + L F S +E + F+ + S +
Sbjct: 247 PS-GVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEVDFAGWLCSTI 300
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 109/252 (43%), Gaps = 40/252 (15%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQ 77
Y +++ +G G L + +++ VAVK ++ K I N +K I NH +
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEK---IDEN----VKREIINHRSLR 73
Query: 78 N-HVVKFLDHFTVLGDNGVHACIVFELA--GQTLSEFKSINYLNMNCMKDISRQILKGLY 134
+ ++V+F + +L H IV E A G+ + + + + +Q++ G+
Sbjct: 74 HPNIVRFKE--VIL--TPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVS 129
Query: 135 YLH--EVCDLVHTDLKHDNILVLTSETLGQKLALEVYE---VLNTTNIADLGYAYKNNAF 189
Y H +VC H DLK +N L+ S K+ Y VL++ + +G
Sbjct: 130 YCHAMQVC---HRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPA----- 181
Query: 190 EFDYIQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLF-DPN--LNDFQHIER 245
YI A EV+L + GK D+WS Y M+ G Y F DP N + I R
Sbjct: 182 ---YI------APEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHR 232
Query: 246 MTEILGDIPDKV 257
+ + IPD V
Sbjct: 233 ILNVQYAIPDYV 244
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 111/275 (40%), Gaps = 33/275 (12%)
Query: 23 KLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVVK 82
K+G G + V + + VAVK M R E+ ++ I ++++N VV+
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMD----LRKQQRRELLFNEVVIMRDYQHEN-VVE 135
Query: 83 FLDHFTVLGDNGVHACIVFE-LAGQTLSEFKSINYLNMNCMKDISRQILKGLYYLHEVCD 141
+ + V G +V E L G L++ + +N + + +L+ L LH
Sbjct: 136 MYNSYLV----GDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLH-AQG 190
Query: 142 LVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGY---AYKNNAFEFDYIQARE 198
++H D+K D+IL LT + ++D G+ K +
Sbjct: 191 VIHRDIKSDSIL-LTHD--------------GRVKLSDFGFCAQVSKEVPRRKXLVGTPY 235
Query: 199 FRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDKVC 258
+ A E++ G VDIWS + +MV GE P N+ ++ M I ++P ++
Sbjct: 236 WMAPELISRLPYGPEVDIWSLGIMVIEMVDGE---PPYFNE-PPLKAMKMIRDNLPPRLK 291
Query: 259 NQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGF 293
N ++ +LL + Q + L + F
Sbjct: 292 NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPF 326
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 98/238 (41%), Gaps = 36/238 (15%)
Query: 9 DIGDTLIST-----YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEV 63
+I D L+ Y R LG G + + +++T A KV+ PK + + ++
Sbjct: 14 EIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVV---PKSMLLKPHQK 70
Query: 64 QLLKITISNHHEYQN-HVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCM 122
+ + I+ H N HVV F F D+ V+ + L K +
Sbjct: 71 EKMSTEIAIHKSLDNPHVVGFHGFFE--DDDFVYVVLEICRRRSLLELHKRRKAVTEPEA 128
Query: 123 KDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGY 182
+ RQ ++G+ YLH ++H DLK N+ + ++ + K I D G
Sbjct: 129 RYFMRQTIQGVQYLHN-NRVIHRDLKLGNLFL--NDDMDVK-------------IGDFGL 172
Query: 183 AYKNNAFEFDYIQARE------FRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFD 234
A K EFD + ++ + A EV+ VDIWS CI Y ++ G+ F+
Sbjct: 173 ATK---IEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 227
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 93/230 (40%), Gaps = 25/230 (10%)
Query: 24 LGWGFSSTVWLCWNIETSSYVAVKVMKGA----PKFLHITRNEVQLLKITISNHHEYQNH 79
LG+G S V L ++ VAVKV++ P F R E Q NH
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQ--NAAALNHPA---- 73
Query: 80 VVKFLDHFTVLGDNGVHACIVFE-LAGQTLSEF-KSINYLNMNCMKDISRQILKGLYYLH 137
+V D G IV E + G TL + + + ++ + L + H
Sbjct: 74 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSH 133
Query: 138 EVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQAR 197
+ ++H D+K NI++ + A++V + IAD G + A I
Sbjct: 134 Q-NGIIHRDVKPANIMISATN------AVKVMDFGIARAIADSGNSVTQTAA---VIGTA 183
Query: 198 EFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLF---DPNLNDFQHIE 244
++ + E G + D++S C+ Y+++TGE F P+ +QH+
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVR 233
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 114/275 (41%), Gaps = 34/275 (12%)
Query: 20 IIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLK-ITISNHHEYQN 78
I R LG G V+L ++ +A+KV+ A L E QL + + I +H + N
Sbjct: 13 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPN 70
Query: 79 HVVKFLDHFTVLGDNGVHACIVFELA--GQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
+++ +F + ++ E A G E + ++ + ++ L Y
Sbjct: 71 -ILRLYGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 125
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H ++H D+K +N+L+ ++ L IAD G++ + D +
Sbjct: 126 HSK-RVIHRDIKPENLLLGSAGEL---------------KIADFGWSVHAPSSRRDTLCG 169
Query: 197 R-EFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPD 255
++ E++ G + VD+WS + Y+ + G+ F+ N + +R++ + PD
Sbjct: 170 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ-ETYKRISRVEFTFPD 228
Query: 256 KVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQE 290
V +R D +LL +N Q + + E
Sbjct: 229 FVTEGAR------DLISRLLKHNPSQRPMLREVLE 257
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 98/238 (41%), Gaps = 36/238 (15%)
Query: 9 DIGDTLIST-----YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEV 63
+I D L+ Y R LG G + + +++T A KV+ PK + + ++
Sbjct: 30 EIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVV---PKSMLLKPHQK 86
Query: 64 QLLKITISNHHEYQN-HVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCM 122
+ + I+ H N HVV F F D+ V+ + L K +
Sbjct: 87 EKMSTEIAIHKSLDNPHVVGFHGFFE--DDDFVYVVLEICRRRSLLELHKRRKAVTEPEA 144
Query: 123 KDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGY 182
+ RQ ++G+ YLH ++H DLK N+ + ++ + K I D G
Sbjct: 145 RYFMRQTIQGVQYLHN-NRVIHRDLKLGNLFL--NDDMDVK-------------IGDFGL 188
Query: 183 AYKNNAFEFDYIQARE------FRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFD 234
A K EFD + ++ + A EV+ VDIWS CI Y ++ G+ F+
Sbjct: 189 ATK---IEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 118/281 (41%), Gaps = 36/281 (12%)
Query: 15 ISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLK-ITISNH 73
+ + I R LG G V+L ++ +A+KV+ A L E QL + + I +H
Sbjct: 33 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA--QLEKAGVEHQLRREVEIQSH 90
Query: 74 HEYQNHVVKFLDHFTVLGDNGVHACIVFELA--GQTLSEFKSINYLNMNCMKDISRQILK 131
+ N +++ +F + ++ E A G E + ++ + ++
Sbjct: 91 LRHPN-ILRLYGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 145
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA-YKNNAFE 190
L Y H ++H D+K +N+L+ ++ L IAD G++ + ++
Sbjct: 146 ALSYCHSK-RVIHRDIKPENLLLGSAGEL---------------KIADFGWSVHAPSSRR 189
Query: 191 FDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHI-ERMTEI 249
D ++ E++ G + VD+WS + Y+ + G+ F+ N +Q +R++ +
Sbjct: 190 DDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE--ANTYQETYKRISRV 247
Query: 250 LGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQE 290
PD V +R D +LL +N Q + + E
Sbjct: 248 EFTFPDFVTEGAR------DLISRLLKHNPSQRPMLREVLE 282
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 25/124 (20%)
Query: 108 LSEFKSINYLNMNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALE 167
+SE +++ Y+ RQ+ KGL ++HE + VH DLK +NI+ T +
Sbjct: 146 MSEDEAVEYM---------RQVCKGLCHMHE-NNYVHLDLKPENIMFTTKRS-------- 187
Query: 168 VYEVLNTTNIADLGYAYKNNAFEFDYIQ--AREFRAAEVVLGGKLGKPVDIWSTACITYQ 225
N + D G + + + EF A EV G +G D+WS ++Y
Sbjct: 188 -----NELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYI 242
Query: 226 MVTG 229
+++G
Sbjct: 243 LLSG 246
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 116/276 (42%), Gaps = 36/276 (13%)
Query: 20 IIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLK-ITISNHHEYQN 78
I R LG G V+L ++ +A+KV+ A L E QL + + I +H + N
Sbjct: 17 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPN 74
Query: 79 HVVKFLDHFTVLGDNGVHACIVFELA--GQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
+++ +F + ++ E A G+ E + ++ + ++ L Y
Sbjct: 75 -ILRLYGYF----HDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYC 129
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA-YKNNAFEFDYIQ 195
H ++H D+K +N+L+ ++ L IAD G++ + ++
Sbjct: 130 HSK-RVIHRDIKPENLLLGSAGEL---------------KIADFGWSVHAPSSRRXXLXG 173
Query: 196 AREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHI-ERMTEILGDIP 254
++ E++ G + VD+WS + Y+ + G+ F+ N +Q +R++ + P
Sbjct: 174 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE--ANTYQETYKRISRVEFTFP 231
Query: 255 DKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQE 290
D V +R D +LL +N Q + + E
Sbjct: 232 DFVTEGAR------DLISRLLKHNPSQRPMLREVLE 261
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 113/306 (36%), Gaps = 34/306 (11%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKV--MKGAPKFLHITRNEVQLLKITISNHHEYQN 78
I +LG G V+ + + +A K+ ++ P + E+Q+L H
Sbjct: 14 ISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL------HECNSP 67
Query: 79 HVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYLHE 138
++V F F D + C+ G K + + +S ++KGL YL E
Sbjct: 68 YIVGFYGAF--YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 125
Query: 139 VCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK-NNAFEFDYIQAR 197
++H D+K NILV + + D G + + + +++ R
Sbjct: 126 KHKIMHRDVKPSNILVNSR---------------GEIKLCDFGVSGQLIDEMANEFVGTR 170
Query: 198 EFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDKV 257
+ + E + G DIWS +M G Y P E + I+ + P K+
Sbjct: 171 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPRPP----MAIFELLDYIVNEPPPKL 226
Query: 258 CNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGF---SKSESLTFSDLILSMLHWDSD 314
+ + EF D K L N + + L F S +E + F+ + S + +
Sbjct: 227 PS-AVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSDAEEVDFAGWLCSTIGLNQP 285
Query: 315 ERFTAA 320
T A
Sbjct: 286 STPTHA 291
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 25/124 (20%)
Query: 108 LSEFKSINYLNMNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALE 167
+SE +++ Y+ RQ+ KGL ++HE + VH DLK +NI+ T +
Sbjct: 252 MSEDEAVEYM---------RQVCKGLCHMHE-NNYVHLDLKPENIMFTTKRS-------- 293
Query: 168 VYEVLNTTNIADLGYAYKNNAFEFDYIQ--AREFRAAEVVLGGKLGKPVDIWSTACITYQ 225
N + D G + + + EF A EV G +G D+WS ++Y
Sbjct: 294 -----NELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYI 348
Query: 226 MVTG 229
+++G
Sbjct: 349 LLSG 352
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 116/276 (42%), Gaps = 36/276 (13%)
Query: 20 IIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLK-ITISNHHEYQN 78
I R LG G V+L ++ +A+KV+ A L E QL + + I +H + N
Sbjct: 12 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPN 69
Query: 79 HVVKFLDHFTVLGDNGVHACIVFELA--GQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
+++ +F + ++ E A G E + ++ + ++ L Y
Sbjct: 70 -ILRLYGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA-YKNNAFEFDYIQ 195
H ++H D+K +N+L+ ++ L IAD G++ + ++ +
Sbjct: 125 HSK-RVIHRDIKPENLLLGSAGEL---------------KIADFGWSVHAPSSRRTELCG 168
Query: 196 AREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHI-ERMTEILGDIP 254
++ E++ G + VD+WS + Y+ + G+ F+ N +Q +R++ + P
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE--ANTYQETYKRISRVEFTFP 226
Query: 255 DKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQE 290
D V +R D +LL +N Q + + E
Sbjct: 227 DFVTEGAR------DLISRLLKHNPSQRPMLREVLE 256
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 102/242 (42%), Gaps = 44/242 (18%)
Query: 22 RKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVV 81
+ LG G S C + +++ AVK++ + + T+ E+ LK+ E ++V
Sbjct: 17 KPLGEGSFSICRKCVHKKSNQAFAVKII--SKRMEANTQKEITALKLC-----EGHPNIV 69
Query: 82 KFLDHFTVLGDNGVHACIVFEL--AGQTLSEFKSINYLNMNCMKDISRQILKGLYYLHEV 139
K + F + +H +V EL G+ K + + I R+++ + ++H+V
Sbjct: 70 KLHEVF----HDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDV 125
Query: 140 CDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAY---------KNNAFE 190
+VH DLK +N+L T E LE+ I D G+A K F
Sbjct: 126 -GVVHRDLKPENLL-FTDENDN----LEI-------KIIDFGFARLKPPDNQPLKTPCFT 172
Query: 191 FDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLF---DPNLNDFQHIERMT 247
Y A E++ + D+WS I Y M++G+ F D +L +E M
Sbjct: 173 LHYA------APELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMK 226
Query: 248 EI 249
+I
Sbjct: 227 KI 228
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 86/229 (37%), Gaps = 28/229 (12%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKV--MKGAPKFLHITRNEVQLLKITISNHHEYQN 78
I +LG G V+ + + +A K+ ++ P + E+Q+L H
Sbjct: 38 ISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL------HECNSP 91
Query: 79 HVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYLHE 138
++V F F D + C+ G K + + +S ++KGL YL E
Sbjct: 92 YIVGFYGAF--YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 149
Query: 139 VCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK-NNAFEFDYIQAR 197
++H D+K NILV + + D G + + ++ ++ R
Sbjct: 150 KHKIMHRDVKPSNILVNSR---------------GEIKLCDFGVSGQLIDSMANSFVGTR 194
Query: 198 EFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERM 246
+ + E + G DIWS +M G Y P D + +E M
Sbjct: 195 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP--PDAKELELM 241
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 86/229 (37%), Gaps = 28/229 (12%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKV--MKGAPKFLHITRNEVQLLKITISNHHEYQN 78
I +LG G V+ + + +A K+ ++ P + E+Q+L H
Sbjct: 11 ISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL------HECNSP 64
Query: 79 HVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYLHE 138
++V F F D + C+ G K + + +S ++KGL YL E
Sbjct: 65 YIVGFYGAF--YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 139 VCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK-NNAFEFDYIQAR 197
++H D+K NILV + + D G + + ++ ++ R
Sbjct: 123 KHKIMHRDVKPSNILVNSR---------------GEIKLCDFGVSGQLIDSMANSFVGTR 167
Query: 198 EFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERM 246
+ + E + G DIWS +M G Y P D + +E M
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP--PDAKELELM 214
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 94/224 (41%), Gaps = 26/224 (11%)
Query: 15 ISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLH--ITRNEVQLLKITISN 72
I + + + LG G V+L +T+ + A+K +K + + V+ ++++
Sbjct: 17 IEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW 76
Query: 73 HHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKG 132
H + H+ T + + + G + +S + +++ + +I+ G
Sbjct: 77 EHPFLTHMF-----CTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILG 131
Query: 133 LYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKN---NAF 189
L +LH +V+ DLK DNIL+ IAD G +N +A
Sbjct: 132 LQFLHSK-GIVYRDLKLDNILLDKD---------------GHIKIADFGMCKENMLGDAK 175
Query: 190 EFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLF 233
++ ++ A E++LG K VD WS + Y+M+ G+ F
Sbjct: 176 TNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 219
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 93/224 (41%), Gaps = 26/224 (11%)
Query: 15 ISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLH--ITRNEVQLLKITISN 72
I + + + LG G V+L +T+ + A+K +K + + V+ ++++
Sbjct: 16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW 75
Query: 73 HHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKG 132
H + H+ T + + + G + +S + +++ + +I+ G
Sbjct: 76 EHPFLTHMF-----CTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILG 130
Query: 133 LYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKN---NAF 189
L +LH +V+ DLK DNIL+ IAD G +N +A
Sbjct: 131 LQFLHSK-GIVYRDLKLDNILLDKD---------------GHIKIADFGMCKENMLGDAK 174
Query: 190 EFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLF 233
+ ++ A E++LG K VD WS + Y+M+ G+ F
Sbjct: 175 TNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF 218
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 101/233 (43%), Gaps = 37/233 (15%)
Query: 15 ISTYFIIRKLGWGFSSTVWLCWNI---ETSSYVAVKVMKGA-----PKFLHITRNEVQLL 66
I + +++ LG G V+L I +T A+KV+K A K TR E Q+L
Sbjct: 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVL 112
Query: 67 KITISNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDIS 126
+ H Q+ + L H+ + +H + + G+ + + ++
Sbjct: 113 E------HIRQSPFLVTL-HYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYV 165
Query: 127 RQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKN 186
+I+ L +LH++ +++ D+K +NIL+ ++ + D G + +
Sbjct: 166 GEIVLALEHLHKLG-IIYRDIKLENILLDSN---------------GHVVLTDFGLSKEF 209
Query: 187 NAFE----FDYIQAREFRAAEVVLGGKLG--KPVDIWSTACITYQMVTGEYLF 233
A E +D+ E+ A ++V GG G K VD WS + Y+++TG F
Sbjct: 210 VADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPF 262
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 116/276 (42%), Gaps = 36/276 (13%)
Query: 20 IIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLK-ITISNHHEYQN 78
I R LG G V+L ++ +A+KV+ A L E QL + + I +H + N
Sbjct: 17 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPN 74
Query: 79 HVVKFLDHFTVLGDNGVHACIVFELA--GQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
+++ +F + ++ E A G+ E + ++ + ++ L Y
Sbjct: 75 -ILRLYGYF----HDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYC 129
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA-YKNNAFEFDYIQ 195
H ++H D+K +N+L+ ++ L IAD G++ + ++
Sbjct: 130 HSK-RVIHRDIKPENLLLGSAGEL---------------KIADFGWSVHAPSSRRTTLCG 173
Query: 196 AREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHI-ERMTEILGDIP 254
++ E++ G + VD+WS + Y+ + G+ F+ N +Q +R++ + P
Sbjct: 174 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE--ANTYQETYKRISRVEFTFP 231
Query: 255 DKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQE 290
D V +R D +LL +N Q + + E
Sbjct: 232 DFVTEGAR------DLISRLLKHNPSQRPMLREVLE 261
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 97/238 (40%), Gaps = 36/238 (15%)
Query: 9 DIGDTLIST-----YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEV 63
+I D L+ Y R LG G + + +++T A KV+ PK + + ++
Sbjct: 30 EIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVV---PKSMLLKPHQK 86
Query: 64 QLLKITISNHHEYQN-HVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCM 122
+ + I+ H N HVV F F D+ V+ + L K +
Sbjct: 87 EKMSTEIAIHKSLDNPHVVGFHGFFE--DDDFVYVVLEICRRRSLLELHKRRKAVTEPEA 144
Query: 123 KDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGY 182
+ RQ ++G+ YLH ++H DLK N+ + ++ + K I D G
Sbjct: 145 RYFMRQTIQGVQYLHN-NRVIHRDLKLGNLFL--NDDMDVK-------------IGDFGL 188
Query: 183 AYKNNAFEFDYIQAR------EFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFD 234
A K EFD + + + A EV+ VDIWS CI Y ++ G+ F+
Sbjct: 189 ATK---IEFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 86/229 (37%), Gaps = 28/229 (12%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKV--MKGAPKFLHITRNEVQLLKITISNHHEYQN 78
I +LG G V+ + + +A K+ ++ P + E+Q+L H
Sbjct: 11 ISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL------HECNSP 64
Query: 79 HVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYLHE 138
++V F F D + C+ G K + + +S ++KGL YL E
Sbjct: 65 YIVGFYGAF--YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 139 VCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK-NNAFEFDYIQAR 197
++H D+K NILV + + D G + + ++ ++ R
Sbjct: 123 KHKIMHRDVKPSNILVNSR---------------GEIKLCDFGVSGQLIDSMANSFVGTR 167
Query: 198 EFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERM 246
+ + E + G DIWS +M G Y P D + +E M
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP--PDAKELELM 214
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 86/229 (37%), Gaps = 28/229 (12%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKV--MKGAPKFLHITRNEVQLLKITISNHHEYQN 78
I +LG G V+ + + +A K+ ++ P + E+Q+L H
Sbjct: 11 ISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL------HECNSP 64
Query: 79 HVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYLHE 138
++V F F D + C+ G K + + +S ++KGL YL E
Sbjct: 65 YIVGFYGAF--YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 139 VCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK-NNAFEFDYIQAR 197
++H D+K NILV + + D G + + ++ ++ R
Sbjct: 123 KHKIMHRDVKPSNILVNSR---------------GEIKLCDFGVSGQLIDSMANSFVGTR 167
Query: 198 EFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERM 246
+ + E + G DIWS +M G Y P D + +E M
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP--PDAKELELM 214
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 86/229 (37%), Gaps = 28/229 (12%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKV--MKGAPKFLHITRNEVQLLKITISNHHEYQN 78
I +LG G V+ + + +A K+ ++ P + E+Q+L H
Sbjct: 11 ISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL------HECNSP 64
Query: 79 HVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYLHE 138
++V F F D + C+ G K + + +S ++KGL YL E
Sbjct: 65 YIVGFYGAF--YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 139 VCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK-NNAFEFDYIQAR 197
++H D+K NILV + + D G + + ++ ++ R
Sbjct: 123 KHKIMHRDVKPSNILVNSR---------------GEIKLCDFGVSGQLIDSMANSFVGTR 167
Query: 198 EFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERM 246
+ + E + G DIWS +M G Y P D + +E M
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP--PDAKELELM 214
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 93/228 (40%), Gaps = 31/228 (13%)
Query: 23 KLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVVK 82
K+G G + V + + VAVK M R E+ ++ I ++++N VV+
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMD----LRKQQRRELLFNEVVIMRDYQHEN-VVE 212
Query: 83 FLDHFTVLGDNGVHACIVFE-LAGQTLSEFKSINYLNMNCMKDISRQILKGLYYLHEVCD 141
+ + V G +V E L G L++ + +N + + +L+ L LH
Sbjct: 213 MYNSYLV----GDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLH-AQG 267
Query: 142 LVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGY---AYKNNAFEFDYIQARE 198
++H D+K D+IL LT + ++D G+ K +
Sbjct: 268 VIHRDIKSDSIL-LTHD--------------GRVKLSDFGFCAQVSKEVPRRKXLVGTPY 312
Query: 199 FRAAEVVLGGKLGKPVDIWSTACITYQMVTGE--YLFDPNLNDFQHIE 244
+ A E++ G VDIWS + +MV GE Y +P L + I
Sbjct: 313 WMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIR 360
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 97/238 (40%), Gaps = 36/238 (15%)
Query: 9 DIGDTLIST-----YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEV 63
+I D L+ Y R LG G + + +++T A KV+ PK + + ++
Sbjct: 30 EIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVV---PKSMLLKPHQK 86
Query: 64 QLLKITISNHHEYQN-HVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCM 122
+ + I+ H N HVV F F D+ V+ + L K +
Sbjct: 87 EKMSTEIAIHKSLDNPHVVGFHGFFE--DDDFVYVVLEICRRRSLLELHKRRKAVTEPEA 144
Query: 123 KDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGY 182
+ RQ ++G+ YLH ++H DLK N+ + ++ + K I D G
Sbjct: 145 RYFMRQTIQGVQYLHN-NRVIHRDLKLGNLFL--NDDMDVK-------------IGDFGL 188
Query: 183 AYKNNAFEFDYIQAR------EFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFD 234
A K EFD + + + A EV+ VDIWS CI Y ++ G+ F+
Sbjct: 189 ATK---IEFDGERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFE 243
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 94/221 (42%), Gaps = 28/221 (12%)
Query: 24 LGWGFSSTVWLCWNIETSSYVAVKVM-----KGAPKFLH----ITRNEVQLLKITISNHH 74
+G G SS V C + T AVK+M + +P+ L TR E +L+ ++ H
Sbjct: 102 IGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILR-QVAGH- 159
Query: 75 EYQNHVVKFLDHFTVLGDNGVHACIVFEL--AGQTLSEFKSINYLNMNCMKDISRQILKG 132
H++ +D + ++ +VF+L G+ L+ + I R +L+
Sbjct: 160 ---PHIITLIDSY----ESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEA 212
Query: 133 LYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFD 192
+ +LH ++VH DLK +NIL L + + + + + ++ + G +
Sbjct: 213 VSFLH-ANNIVHRDLKPENIL------LDDNMQIRLSDFGFSCHL-EPGEKLRELCGTPG 264
Query: 193 YIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLF 233
Y+ + + GK VD+W+ I + ++ G F
Sbjct: 265 YLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF 305
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 87/229 (37%), Gaps = 28/229 (12%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKV--MKGAPKFLHITRNEVQLLKITISNHHEYQN 78
I +LG G V+ + + +A K+ ++ P + E+Q+L H
Sbjct: 73 ISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL------HECNSP 126
Query: 79 HVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYLHE 138
++V F F D + C+ G K + + +S ++KGL YL E
Sbjct: 127 YIVGFYGAF--YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 184
Query: 139 VCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK-NNAFEFDYIQAR 197
++H D+K NILV + + + D G + + ++ ++ R
Sbjct: 185 KHKIMHRDVKPSNILVNSRGEI---------------KLCDFGVSGQLIDSMANSFVGTR 229
Query: 198 EFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERM 246
+ + E + G DIWS +M G Y P D + +E M
Sbjct: 230 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP--PDAKELELM 276
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 34/233 (14%)
Query: 15 ISTYFIIRK---LGWGFSSTVWLCWNIETSSYVAVKVMKG-APKFLHITRNEVQLLKITI 70
+++++ + K LG G V C T +A K++K K +NE I++
Sbjct: 85 VNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNE-----ISV 139
Query: 71 SNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDI--SRQ 128
N ++ N +++ D F N + + + G+ +Y N+ + I +Q
Sbjct: 140 MNQLDHAN-LIQLYDAFE--SKNDIVLVMEYVDGGELFDRIIDESY-NLTELDTILFMKQ 195
Query: 129 ILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNA 188
I +G+ ++H++ ++H DLK +NIL + + I D G A +
Sbjct: 196 ICEGIRHMHQMY-ILHLDLKPENILCVNRDA-------------KQIKIIDFGLARRYKP 241
Query: 189 FEFDYIQ--AREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLND 239
E + EF A EVV + P D+WS I Y +++G P L D
Sbjct: 242 REKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSG---LSPFLGD 291
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 92/230 (40%), Gaps = 25/230 (10%)
Query: 24 LGWGFSSTVWLCWNIETSSYVAVKVMKGA----PKFLHITRNEVQLLKITISNHHEYQNH 79
LG+G S V L ++ VAVKV++ P F R E Q NH
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQ--NAAALNHPA---- 73
Query: 80 VVKFLDHFTVLGDNGVHACIVFE-LAGQTLSEF-KSINYLNMNCMKDISRQILKGLYYLH 137
+V D G IV E + G TL + + + ++ + L + H
Sbjct: 74 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSH 133
Query: 138 EVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQAR 197
+ ++H D+K NIL+ + A++V + IAD G + A I
Sbjct: 134 Q-NGIIHRDVKPANILISATN------AVKVVDFGIARAIADSGNSVXQTAA---VIGTA 183
Query: 198 EFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLF---DPNLNDFQHIE 244
++ + E G + D++S C+ Y+++TGE F P +QH+
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR 233
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 97/220 (44%), Gaps = 25/220 (11%)
Query: 14 LISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNH 73
L Y ++KLG G V LC + T A+K+++ + + N L ++ +
Sbjct: 35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTS--VSTSSNSKLLEEVAVLKL 92
Query: 74 HEYQNHVVKFLDHFTVLGDNGVHACIVFEL--AGQTLSEFKSINYLNMNCMKDISRQILK 131
++ N ++K D F ++ + +V E G+ E N I +Q+L
Sbjct: 93 LDHPN-IMKLYDFF----EDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLS 147
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA--YKNNAF 189
G+ YLH+ ++VH DLK +N+L+ + E K AL I D G + ++N
Sbjct: 148 GVTYLHK-HNIVHRDLKPENLLLESKE----KDAL--------IKIVDFGLSAVFENQKK 194
Query: 190 EFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTG 229
+ + + A E VL K + D+WS I + ++ G
Sbjct: 195 MKERLGTAYYIAPE-VLRKKYDEKCDVWSIGVILFILLAG 233
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 114/275 (41%), Gaps = 34/275 (12%)
Query: 20 IIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLK-ITISNHHEYQN 78
I R LG G V+L ++ +A+KV+ A L E QL + + I +H + N
Sbjct: 12 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPN 69
Query: 79 HVVKFLDHFTVLGDNGVHACIVFELA--GQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
+++ +F + ++ E A G E + ++ + ++ L Y
Sbjct: 70 -ILRLYGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA-YKNNAFEFDYIQ 195
H ++H D+K +N+L+ ++ L IAD G++ + ++
Sbjct: 125 HSK-RVIHRDIKPENLLLGSAGEL---------------KIADFGWSVHAPSSRRXXLCG 168
Query: 196 AREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPD 255
++ E++ G + VD+WS + Y+ + G+ F+ N + +R++ + PD
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ-ETYKRISRVEFTFPD 227
Query: 256 KVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQE 290
V +R D +LL +N Q + + E
Sbjct: 228 FVTEGAR------DLISRLLKHNPSQRPMLREVLE 256
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 19/127 (14%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK-- 185
Q+ + L Y+H + H D+K N+L L +T KL D G A +
Sbjct: 164 QLFRSLAYIHSF-GICHRDIKPQNLL-LDPDTAVLKLC-------------DFGSAKQLV 208
Query: 186 NNAFEFDYIQAREFRAAEVVLGGK-LGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIE 244
YI +R +RA E++ G +D+WS C+ +++ G+ +F P + +
Sbjct: 209 RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF-PGDSGVDQLV 267
Query: 245 RMTEILG 251
+ ++LG
Sbjct: 268 EIIKVLG 274
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 19/127 (14%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK-- 185
Q+ + L Y+H + H D+K N+L L +T KL D G A +
Sbjct: 166 QLFRSLAYIHSF-GICHRDIKPQNLL-LDPDTAVLKLC-------------DFGSAKQLV 210
Query: 186 NNAFEFDYIQAREFRAAEVVLGGK-LGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIE 244
YI +R +RA E++ G +D+WS C+ +++ G+ +F P + +
Sbjct: 211 RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF-PGDSGVDQLV 269
Query: 245 RMTEILG 251
+ ++LG
Sbjct: 270 EIIKVLG 276
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 19/127 (14%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK-- 185
Q+ + L Y+H + H D+K N+L L +T KL D G A +
Sbjct: 130 QLFRSLAYIHSF-GICHRDIKPQNLL-LDPDTAVLKLC-------------DFGSAKQLV 174
Query: 186 NNAFEFDYIQAREFRAAEVVLGGK-LGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIE 244
YI +R +RA E++ G +D+WS C+ +++ G+ +F P + +
Sbjct: 175 RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF-PGDSGVDQLV 233
Query: 245 RMTEILG 251
+ ++LG
Sbjct: 234 EIIKVLG 240
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 19/127 (14%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK-- 185
Q+ + L Y+H + H D+K N+L L +T KL D G A +
Sbjct: 158 QLFRSLAYIHSF-GICHRDIKPQNLL-LDPDTAVLKLC-------------DFGSAKQLV 202
Query: 186 NNAFEFDYIQAREFRAAEVVLGGK-LGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIE 244
YI +R +RA E++ G +D+WS C+ +++ G+ +F P + +
Sbjct: 203 RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF-PGDSGVDQLV 261
Query: 245 RMTEILG 251
+ ++LG
Sbjct: 262 EIIKVLG 268
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 19/127 (14%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK-- 185
Q+ + L Y+H + H D+K N+L L +T KL D G A +
Sbjct: 168 QLFRSLAYIHSF-GICHRDIKPQNLL-LDPDTAVLKLC-------------DFGSAKQLV 212
Query: 186 NNAFEFDYIQAREFRAAEVVLGGK-LGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIE 244
YI +R +RA E++ G +D+WS C+ +++ G+ +F P + +
Sbjct: 213 RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF-PGDSGVDQLV 271
Query: 245 RMTEILG 251
+ ++LG
Sbjct: 272 EIIKVLG 278
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 19/127 (14%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK-- 185
Q+ + L Y+H + H D+K N+L L +T KL D G A +
Sbjct: 135 QLFRSLAYIHSF-GICHRDIKPQNLL-LDPDTAVLKLC-------------DFGSAKQLV 179
Query: 186 NNAFEFDYIQAREFRAAEVVLGGK-LGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIE 244
YI +R +RA E++ G +D+WS C+ +++ G+ +F P + +
Sbjct: 180 RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF-PGDSGVDQLV 238
Query: 245 RMTEILG 251
+ ++LG
Sbjct: 239 EIIKVLG 245
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 113/278 (40%), Gaps = 40/278 (14%)
Query: 20 IIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGA----PKFLHITRNEVQLLKITISNHHE 75
I R LG G V+L ++ +A+KV+ A H R EV+ I +H
Sbjct: 15 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE-----IQSHLR 69
Query: 76 YQNHVVKFLDHFTVLGDNGVHACIVFELA--GQTLSEFKSINYLNMNCMKDISRQILKGL 133
+ N +++ +F + ++ E A G E + ++ + ++ L
Sbjct: 70 HPN-ILRLYGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 124
Query: 134 YYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA-YKNNAFEFD 192
Y H ++H D+K +N+L+ ++ L IAD G++ + ++
Sbjct: 125 SYCHSK-RVIHRDIKPENLLLGSAGEL---------------KIADFGWSVHAPSSRRXX 168
Query: 193 YIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGD 252
++ E++ G + VD+WS + Y+ + G+ F+ N + +R++ +
Sbjct: 169 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ-ETYKRISRVEFT 227
Query: 253 IPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQE 290
PD V +R D +LL +N Q + + E
Sbjct: 228 FPDFVTEGAR------DLISRLLKHNPSQRPMLREVLE 259
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 19/127 (14%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK-- 185
Q+ + L Y+H + H D+K N+L L +T KL D G A +
Sbjct: 130 QLFRSLAYIHSF-GICHRDIKPQNLL-LDPDTAVLKLC-------------DFGSAKQLV 174
Query: 186 NNAFEFDYIQAREFRAAEVVLGGK-LGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIE 244
YI +R +RA E++ G +D+WS C+ +++ G+ +F P + +
Sbjct: 175 RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF-PGDSGVDQLV 233
Query: 245 RMTEILG 251
+ ++LG
Sbjct: 234 EIIKVLG 240
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 19/127 (14%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK-- 185
Q+ + L Y+H + H D+K N+L L +T KL D G A +
Sbjct: 130 QLFRSLAYIHSF-GICHRDIKPQNLL-LDPDTAVLKLC-------------DFGSAKQLV 174
Query: 186 NNAFEFDYIQAREFRAAEVVLGGK-LGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIE 244
YI +R +RA E++ G +D+WS C+ +++ G+ +F P + +
Sbjct: 175 RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF-PGDSGVDQLV 233
Query: 245 RMTEILG 251
+ ++LG
Sbjct: 234 EIIKVLG 240
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 19/127 (14%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK-- 185
Q+ + L Y+H + H D+K N+L L +T KL D G A +
Sbjct: 209 QLFRSLAYIHSF-GICHRDIKPQNLL-LDPDTAVLKLC-------------DFGSAKQLV 253
Query: 186 NNAFEFDYIQAREFRAAEVVLGGK-LGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIE 244
YI +R +RA E++ G +D+WS C+ +++ G+ +F P + +
Sbjct: 254 RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF-PGDSGVDQLV 312
Query: 245 RMTEILG 251
+ ++LG
Sbjct: 313 EIIKVLG 319
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 93/228 (40%), Gaps = 35/228 (15%)
Query: 15 ISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLK-ITISNH 73
I + I+R LG G V+L + +A+KV+ + L E QL + I I +H
Sbjct: 13 IDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQ--LEKEGVEHQLRREIEIQSH 70
Query: 74 HEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGL 133
+ N +++ ++F ++ + F G+ E + + ++ L
Sbjct: 71 LRHPN-ILRMYNYFH--DRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADAL 127
Query: 134 YYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFE--- 190
+Y HE ++H D+K +N+L +G K L+ IAD G++ +
Sbjct: 128 HYCHER-KVIHRDIKPENLL------MGYKGELK---------IADFGWSVHAPSLRRRX 171
Query: 191 ----FDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFD 234
DY+ E++ G + VD+W + Y+ + G FD
Sbjct: 172 MCGTLDYL------PPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 19/127 (14%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK-- 185
Q+ + L Y+H + H D+K N+L L +T KL D G A +
Sbjct: 143 QLFRSLAYIHSF-GICHRDIKPQNLL-LDPDTAVLKLC-------------DFGSAKQLV 187
Query: 186 NNAFEFDYIQAREFRAAEVVLGGK-LGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIE 244
YI +R +RA E++ G +D+WS C+ +++ G+ +F P + +
Sbjct: 188 RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF-PGDSGVDQLV 246
Query: 245 RMTEILG 251
+ ++LG
Sbjct: 247 EIIKVLG 253
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 114/275 (41%), Gaps = 34/275 (12%)
Query: 20 IIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLK-ITISNHHEYQN 78
I R LG G V+L ++ +A+KV+ A L E QL + + I +H + N
Sbjct: 12 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPN 69
Query: 79 HVVKFLDHFTVLGDNGVHACIVFELA--GQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
+++ +F + ++ E A G E + ++ + ++ L Y
Sbjct: 70 -ILRLYGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA-YKNNAFEFDYIQ 195
H ++H D+K +N+L+ ++ L IAD G++ + ++
Sbjct: 125 HSK-RVIHRDIKPENLLLGSAGEL---------------KIADFGWSVHAPSSRRTXLCG 168
Query: 196 AREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPD 255
++ E++ G + VD+WS + Y+ + G+ F+ N + +R++ + PD
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ-ETYKRISRVEFTFPD 227
Query: 256 KVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQE 290
V +R D +LL +N Q + + E
Sbjct: 228 FVTEGAR------DLISRLLKHNPSQRPMLREVLE 256
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 113/278 (40%), Gaps = 40/278 (14%)
Query: 20 IIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGA----PKFLHITRNEVQLLKITISNHHE 75
I R LG G V+L ++ +A+KV+ A H R EV+ I +H
Sbjct: 16 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE-----IQSHLR 70
Query: 76 YQNHVVKFLDHFTVLGDNGVHACIVFELA--GQTLSEFKSINYLNMNCMKDISRQILKGL 133
+ N +++ +F + ++ E A G E + ++ + ++ L
Sbjct: 71 HPN-ILRLYGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 125
Query: 134 YYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA-YKNNAFEFD 192
Y H ++H D+K +N+L+ ++ L IAD G++ + ++
Sbjct: 126 SYCHSK-RVIHRDIKPENLLLGSAGEL---------------KIADFGWSVHAPSSRRTT 169
Query: 193 YIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGD 252
++ E++ G + VD+WS + Y+ + G+ F+ N + +R++ +
Sbjct: 170 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ-ETYKRISRVEFT 228
Query: 253 IPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQE 290
PD V +R D +LL +N Q + + E
Sbjct: 229 FPDFVTEGAR------DLISRLLKHNPSQRPMLREVLE 260
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 113/278 (40%), Gaps = 40/278 (14%)
Query: 20 IIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGA----PKFLHITRNEVQLLKITISNHHE 75
I R LG G V+L ++ +A+KV+ A H R EV+ I +H
Sbjct: 11 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE-----IQSHLR 65
Query: 76 YQNHVVKFLDHFTVLGDNGVHACIVFELA--GQTLSEFKSINYLNMNCMKDISRQILKGL 133
+ N +++ +F + ++ E A G E + ++ + ++ L
Sbjct: 66 HPN-ILRLYGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 120
Query: 134 YYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA-YKNNAFEFD 192
Y H ++H D+K +N+L+ ++ L IAD G++ + ++
Sbjct: 121 SYCHSK-RVIHRDIKPENLLLGSAGEL---------------KIADFGWSVHAPSSRRTT 164
Query: 193 YIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGD 252
++ E++ G + VD+WS + Y+ + G+ F+ N + +R++ +
Sbjct: 165 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ-ETYKRISRVEFT 223
Query: 253 IPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQE 290
PD V +R D +LL +N Q + + E
Sbjct: 224 FPDFVTEGAR------DLISRLLKHNPSQRPMLREVLE 255
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 114/275 (41%), Gaps = 34/275 (12%)
Query: 20 IIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLK-ITISNHHEYQN 78
I R LG G V+L ++ +A+KV+ A L E QL + + I +H + N
Sbjct: 12 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPN 69
Query: 79 HVVKFLDHFTVLGDNGVHACIVFELA--GQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
+++ +F + ++ E A G E + ++ + ++ L Y
Sbjct: 70 -ILRLYGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA-YKNNAFEFDYIQ 195
H ++H D+K +N+L+ ++ L IAD G++ + ++
Sbjct: 125 HSK-RVIHRDIKPENLLLGSAGEL---------------KIADFGWSVHAPSSRRAALCG 168
Query: 196 AREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPD 255
++ E++ G + VD+WS + Y+ + G+ F+ N + +R++ + PD
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ-ETYKRISRVEFTFPD 227
Query: 256 KVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQE 290
V +R D +LL +N Q + + E
Sbjct: 228 FVTEGAR------DLISRLLKHNPSQRPMLREVLE 256
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 114/275 (41%), Gaps = 34/275 (12%)
Query: 20 IIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLK-ITISNHHEYQN 78
I R LG G V+L ++ +A+KV+ A L E QL + + I +H + N
Sbjct: 15 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPN 72
Query: 79 HVVKFLDHFTVLGDNGVHACIVFELA--GQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
+++ +F + ++ E A G E + ++ + ++ L Y
Sbjct: 73 -ILRLYGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 127
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA-YKNNAFEFDYIQ 195
H ++H D+K +N+L+ ++ L IAD G++ + ++
Sbjct: 128 HSK-RVIHRDIKPENLLLGSAGEL---------------KIADFGWSVHAPSSRRTTLCG 171
Query: 196 AREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPD 255
++ E++ G + VD+WS + Y+ + G+ F+ N + +R++ + PD
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ-ETYKRISRVEFTFPD 230
Query: 256 KVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQE 290
V +R D +LL +N Q + + E
Sbjct: 231 FVTEGAR------DLISRLLKHNPSQRPMLREVLE 259
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 115/276 (41%), Gaps = 36/276 (13%)
Query: 20 IIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLK-ITISNHHEYQN 78
I R LG G V+L ++ +A+KV+ A L E QL + + I +H + N
Sbjct: 14 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPN 71
Query: 79 HVVKFLDHFTVLGDNGVHACIVFELA--GQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
+++ +F + ++ E A G E + ++ + ++ L Y
Sbjct: 72 -ILRLYGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 126
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA-YKNNAFEFDYIQ 195
H ++H D+K +N+L+ ++ L IAD G++ + ++
Sbjct: 127 HSK-RVIHRDIKPENLLLGSAGEL---------------KIADFGWSVHAPSSRRXXLCG 170
Query: 196 AREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHI-ERMTEILGDIP 254
++ E++ G + VD+WS + Y+ + G+ F+ N +Q +R++ + P
Sbjct: 171 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE--ANTYQETYKRISRVEFTFP 228
Query: 255 DKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQE 290
D V +R D +LL +N Q + + E
Sbjct: 229 DFVTEGAR------DLISRLLKHNPSQRPMLREVLE 258
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 49/109 (44%), Gaps = 13/109 (11%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNN 187
Q++ GL YLH +VH D+K N+L+ T TL + AL V E L+ D + +
Sbjct: 117 QLIDGLEYLHSQ-GIVHKDIKPGNLLLTTGGTL-KISALGVAEALHPFAADDTCRTSQGS 174
Query: 188 AFEFDYIQAREFRAAEVVLGGKL--GKPVDIWSTACITYQMVTGEYLFD 234
F+ E+ G G VDIWS Y + TG Y F+
Sbjct: 175 P---------AFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFE 214
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 115/276 (41%), Gaps = 36/276 (13%)
Query: 20 IIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLK-ITISNHHEYQN 78
I R LG G V+L ++ +A+KV+ A L E QL + + I +H + N
Sbjct: 12 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPN 69
Query: 79 HVVKFLDHFTVLGDNGVHACIVFELA--GQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
+++ +F + ++ E A G E + ++ + ++ L Y
Sbjct: 70 -ILRLYGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 124
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA-YKNNAFEFDYIQ 195
H ++H D+K +N+L+ ++ L IAD G++ + ++
Sbjct: 125 HSK-RVIHRDIKPENLLLGSAGEL---------------KIADFGWSVHAPSSRRTTLCG 168
Query: 196 AREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHI-ERMTEILGDIP 254
++ E++ G + VD+WS + Y+ + G+ F+ N +Q +R++ + P
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE--ANTYQETYKRISRVEFTFP 226
Query: 255 DKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQE 290
D V +R D +LL +N Q + + E
Sbjct: 227 DFVTEGAR------DLISRLLKHNPSQRPMLREVLE 256
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 114/275 (41%), Gaps = 34/275 (12%)
Query: 20 IIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLK-ITISNHHEYQN 78
I R LG G V+L ++ +A+KV+ A L E QL + + I +H + N
Sbjct: 15 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPN 72
Query: 79 HVVKFLDHFTVLGDNGVHACIVFELA--GQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
+++ +F + ++ E A G E + ++ + ++ L Y
Sbjct: 73 -ILRLYGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 127
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA-YKNNAFEFDYIQ 195
H ++H D+K +N+L+ ++ L IAD G++ + ++
Sbjct: 128 HSK-RVIHRDIKPENLLLGSAGEL---------------KIADFGWSVHAPSSRRAALCG 171
Query: 196 AREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPD 255
++ E++ G + VD+WS + Y+ + G+ F+ N + +R++ + PD
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ-ETYKRISRVEFTFPD 230
Query: 256 KVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQE 290
V +R D +LL +N Q + + E
Sbjct: 231 FVTEGAR------DLISRLLKHNPSQRPMLREVLE 259
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 18/118 (15%)
Query: 127 RQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKN 186
+QIL+ + Y H +VH +LK +N+L L S+ G + L AD G A +
Sbjct: 135 QQILESIAYCHS-NGIVHRNLKPENLL-LASKAKGAAVKL-----------ADFGLAIEV 181
Query: 187 NAFE--FDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQH 242
N E + + + EV+ KPVDIW+ I Y ++ G + P ++ QH
Sbjct: 182 NDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG---YPPFWDEDQH 236
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 18/118 (15%)
Query: 127 RQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKN 186
+QIL+ + Y H +VH +LK +N+L L S+ G + L AD G A +
Sbjct: 112 QQILESIAYCHS-NGIVHRNLKPENLL-LASKAKGAAVKL-----------ADFGLAIEV 158
Query: 187 NAFE--FDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQH 242
N E + + + EV+ KPVDIW+ I Y ++ G + P ++ QH
Sbjct: 159 NDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG---YPPFWDEDQH 213
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 18/118 (15%)
Query: 127 RQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKN 186
+QIL+ + Y H +VH +LK +N+L L S+ G + L AD G A +
Sbjct: 112 QQILESIAYCHS-NGIVHRNLKPENLL-LASKAKGAAVKL-----------ADFGLAIEV 158
Query: 187 NAFE--FDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQH 242
N E + + + EV+ KPVDIW+ I Y ++ G + P ++ QH
Sbjct: 159 NDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG---YPPFWDEDQH 213
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 18/118 (15%)
Query: 127 RQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKN 186
+QIL+ + Y H +VH +LK +N+L L S+ G + L AD G A +
Sbjct: 111 QQILESIAYCHS-NGIVHRNLKPENLL-LASKAKGAAVKL-----------ADFGLAIEV 157
Query: 187 NAFE--FDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQH 242
N E + + + EV+ KPVDIW+ I Y ++ G + P ++ QH
Sbjct: 158 NDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG---YPPFWDEDQH 212
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 92/230 (40%), Gaps = 25/230 (10%)
Query: 24 LGWGFSSTVWLCWNIETSSYVAVKVMKGA----PKFLHITRNEVQLLKITISNHHEYQNH 79
LG+G S V L ++ VAVKV++ P F R E Q NH
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQ--NAAALNHPA---- 73
Query: 80 VVKFLDHFTVLGDNGVHACIVFE-LAGQTLSEF-KSINYLNMNCMKDISRQILKGLYYLH 137
+V D G IV E + G TL + + + ++ + L + H
Sbjct: 74 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSH 133
Query: 138 EVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQAR 197
+ ++H D+K NI++ + A++V + IAD G + A I
Sbjct: 134 Q-NGIIHRDVKPANIMISATN------AVKVMDFGIARAIADSGNSVTQTAA---VIGTA 183
Query: 198 EFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLF---DPNLNDFQHIE 244
++ + E G + D++S C+ Y+++TGE F P +QH+
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR 233
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 115/276 (41%), Gaps = 36/276 (13%)
Query: 20 IIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLK-ITISNHHEYQN 78
I R LG G V+L ++ +A+KV+ A L E QL + + I +H + N
Sbjct: 17 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPN 74
Query: 79 HVVKFLDHFTVLGDNGVHACIVFELA--GQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
+++ +F + ++ E A G E + ++ + ++ L Y
Sbjct: 75 -ILRLYGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 129
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA-YKNNAFEFDYIQ 195
H ++H D+K +N+L+ ++ L IAD G++ + ++
Sbjct: 130 HSK-RVIHRDIKPENLLLGSAGEL---------------KIADFGWSVHAPSSRRTTLCG 173
Query: 196 AREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHI-ERMTEILGDIP 254
++ E++ G + VD+WS + Y+ + G+ F+ N +Q +R++ + P
Sbjct: 174 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE--ANTYQETYKRISRVEFTFP 231
Query: 255 DKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQE 290
D V +R D +LL +N Q + + E
Sbjct: 232 DFVTEGAR------DLISRLLKHNPSQRPMLREVLE 261
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 57/275 (20%), Positives = 114/275 (41%), Gaps = 34/275 (12%)
Query: 20 IIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLK-ITISNHHEYQN 78
I R LG G V+L ++ +A+KV+ A L E QL + + I +H + N
Sbjct: 15 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPN 72
Query: 79 HVVKFLDHFTVLGDNGVHACIVFELA--GQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
+++ +F + ++ E A G E + ++ + ++ L Y
Sbjct: 73 -ILRLYGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 127
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA-YKNNAFEFDYIQ 195
H ++H D+K +N+L+ ++ L IAD G++ + ++
Sbjct: 128 HSK-RVIHRDIKPENLLLGSAGEL---------------KIADFGWSVHAPSSRRTTLCG 171
Query: 196 AREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPD 255
++ E++ G + VD+WS + Y+ + G+ F+ N + +R++ + PD
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ-ETYKRISRVEFTFPD 230
Query: 256 KVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQE 290
V +R D +LL +N Q + + E
Sbjct: 231 FVTEGAR------DLISRLLKHNPSQRPMLREVLE 259
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 92/230 (40%), Gaps = 25/230 (10%)
Query: 24 LGWGFSSTVWLCWNIETSSYVAVKVMKGA----PKFLHITRNEVQLLKITISNHHEYQNH 79
LG+G S V L ++ VAVKV++ P F R E Q NH
Sbjct: 37 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQ--NAAALNHPA---- 90
Query: 80 VVKFLDHFTVLGDNGVHACIVFE-LAGQTLSEF-KSINYLNMNCMKDISRQILKGLYYLH 137
+V D G IV E + G TL + + + ++ + L + H
Sbjct: 91 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSH 150
Query: 138 EVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQAR 197
+ ++H D+K NI++ + A++V + IAD G + A I
Sbjct: 151 Q-NGIIHRDVKPANIMISATN------AVKVMDFGIARAIADSGNSVTQTAA---VIGTA 200
Query: 198 EFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLF---DPNLNDFQHIE 244
++ + E G + D++S C+ Y+++TGE F P +QH+
Sbjct: 201 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR 250
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 82/203 (40%), Gaps = 20/203 (9%)
Query: 35 CWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEY-QNHVVKFLDHFTVLGDN 93
C+ I + V K PK L + ++ + + + IS H HVV F F DN
Sbjct: 33 CFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFE---DN 89
Query: 94 GVHACIVFELAGQT--LSEFKSINYLNMNCMKDISRQILKGLYYLHEVCDLVHTDLKHDN 151
+V EL + L K L + RQI+ G YLH ++H DLK N
Sbjct: 90 DF-VFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR-NRVIHRDLKLGN 147
Query: 152 ILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQAREFRAAEVVLGGKLG 211
+ L + L +++ + T + G K +YI A EV+
Sbjct: 148 LF------LNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYI------APEVLSKKGHS 195
Query: 212 KPVDIWSTACITYQMVTGEYLFD 234
VD+WS CI Y ++ G+ F+
Sbjct: 196 FEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 112/278 (40%), Gaps = 40/278 (14%)
Query: 20 IIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGA----PKFLHITRNEVQLLKITISNHHE 75
I R LG G V+L + +A+KV+ A H R EV+ I +H
Sbjct: 9 IGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVE-----IQSHLR 63
Query: 76 YQNHVVKFLDHFTVLGDNGVHACIVFELA--GQTLSEFKSINYLNMNCMKDISRQILKGL 133
+ N +++ +F + ++ E A G E + ++ + ++ L
Sbjct: 64 HPN-ILRLYGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 118
Query: 134 YYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA-YKNNAFEFD 192
Y H ++H D+K +N+L+ ++ L IAD G++ + ++
Sbjct: 119 SYCHSK-RVIHRDIKPENLLLGSAGEL---------------KIADFGWSVHAPSSRRTT 162
Query: 193 YIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGD 252
++ E++ G + VD+WS + Y+ + G+ F+ N + +R++ +
Sbjct: 163 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ-ETYKRISRVEFT 221
Query: 253 IPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQE 290
PD V +R D +LL +N Q + + E
Sbjct: 222 FPDFVTEGAR------DLISRLLKHNPSQRPMLREVLE 253
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 92/230 (40%), Gaps = 25/230 (10%)
Query: 24 LGWGFSSTVWLCWNIETSSYVAVKVMKGA----PKFLHITRNEVQLLKITISNHHEYQNH 79
LG+G S V L ++ VAVKV++ P F R E Q NH
Sbjct: 20 LGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQ--NAAALNHPA---- 73
Query: 80 VVKFLDHFTVLGDNGVHACIVFE-LAGQTLSEF-KSINYLNMNCMKDISRQILKGLYYLH 137
+V D G IV E + G TL + + + ++ + L + H
Sbjct: 74 IVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSH 133
Query: 138 EVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQAR 197
+ ++H D+K NI++ + A++V + IAD G + A I
Sbjct: 134 Q-NGIIHRDVKPANIMISATN------AVKVMDFGIARAIADSGNSVTQTAA---VIGTA 183
Query: 198 EFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLF---DPNLNDFQHIE 244
++ + E G + D++S C+ Y+++TGE F P +QH+
Sbjct: 184 QYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR 233
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 82/203 (40%), Gaps = 20/203 (9%)
Query: 35 CWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEY-QNHVVKFLDHFTVLGDN 93
C+ I + V K PK L + ++ + + + IS H HVV F F DN
Sbjct: 33 CFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFE---DN 89
Query: 94 GVHACIVFELAGQT--LSEFKSINYLNMNCMKDISRQILKGLYYLHEVCDLVHTDLKHDN 151
+V EL + L K L + RQI+ G YLH ++H DLK N
Sbjct: 90 DF-VFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR-NRVIHRDLKLGN 147
Query: 152 ILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQAREFRAAEVVLGGKLG 211
+ L + L +++ + T + G K +YI A EV+
Sbjct: 148 LF------LNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYI------APEVLSKKGHS 195
Query: 212 KPVDIWSTACITYQMVTGEYLFD 234
VD+WS CI Y ++ G+ F+
Sbjct: 196 FEVDVWSIGCIMYTLLVGKPPFE 218
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 93/236 (39%), Gaps = 41/236 (17%)
Query: 11 GDTLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITI 70
G I Y + LG G V + + T VAVK++ R +++ L +
Sbjct: 6 GRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKIL---------NRQKIRSLDVVG 56
Query: 71 SNHHEYQN-------HVVKFLDHFTVLGDNGVHACIVFELAGQTLSEF--KSINYLNMNC 121
E QN H++K + V+ ++ ++G L ++ K M
Sbjct: 57 KIKREIQNLKLFRHPHIIKL---YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEA 113
Query: 122 MKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLG 181
+ + +QIL + Y H +VH DLK +N+L+ + IAD G
Sbjct: 114 RR-LFQQILSAVDYCHRHM-VVHRDLKPENVLL---------------DAHMNAKIADFG 156
Query: 182 YAYKNNAFEF--DYIQAREFRAAEVVLGGKLGKP-VDIWSTACITYQMVTGEYLFD 234
+ + EF D + + A EV+ G P VDIWS I Y ++ G FD
Sbjct: 157 LSNMMSDGEFLRDSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 82/203 (40%), Gaps = 20/203 (9%)
Query: 35 CWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEY-QNHVVKFLDHFTVLGDN 93
C+ I + V K PK L + ++ + + + IS H HVV F F DN
Sbjct: 37 CFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFE---DN 93
Query: 94 GVHACIVFELAGQT--LSEFKSINYLNMNCMKDISRQILKGLYYLHEVCDLVHTDLKHDN 151
+V EL + L K L + RQI+ G YLH ++H DLK N
Sbjct: 94 DF-VFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR-NRVIHRDLKLGN 151
Query: 152 ILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQAREFRAAEVVLGGKLG 211
+ L + L +++ + T + G K +YI A EV+
Sbjct: 152 LF------LNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYI------APEVLSKKGHS 199
Query: 212 KPVDIWSTACITYQMVTGEYLFD 234
VD+WS CI Y ++ G+ F+
Sbjct: 200 FEVDVWSIGCIMYTLLVGKPPFE 222
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 115/276 (41%), Gaps = 36/276 (13%)
Query: 20 IIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLK-ITISNHHEYQN 78
I R LG G V+L ++ +A+KV+ A L E QL + + I +H + N
Sbjct: 13 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPN 70
Query: 79 HVVKFLDHFTVLGDNGVHACIVFELA--GQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
+++ +F + ++ E A G E + ++ + ++ L Y
Sbjct: 71 -ILRLYGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 125
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA-YKNNAFEFDYIQ 195
H ++H D+K +N+L+ ++ L IAD G++ + ++
Sbjct: 126 HSK-RVIHRDIKPENLLLGSAGEL---------------KIADFGWSCHAPSSRRTTLSG 169
Query: 196 AREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHI-ERMTEILGDIP 254
++ E++ G + VD+WS + Y+ + G+ F+ N +Q +R++ + P
Sbjct: 170 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE--ANTYQETYKRISRVEFTFP 227
Query: 255 DKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQE 290
D V +R D +LL +N Q + + E
Sbjct: 228 DFVTEGAR------DLISRLLKHNPSQRPMLREVLE 257
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/238 (21%), Positives = 96/238 (40%), Gaps = 41/238 (17%)
Query: 24 LGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVVKF 83
LG+G S V L ++ VAVKV++ + R+ L+ E QN
Sbjct: 20 LGFGGMSEVHLARDLRLHRDVAVKVLRA-----DLARDPSFYLRF----RREAQN--AAA 68
Query: 84 LDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDI-----SRQILKGLYYLHE 138
L+H ++ V+A E L + + Y++ ++DI + + + +
Sbjct: 69 LNHPAIVA---VYATGEAETPAGPLP-YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIAD 124
Query: 139 VCD---------LVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAF 189
C ++H D+K NI++ + A++V + IAD G + A
Sbjct: 125 ACQALNFSHQNGIIHRDVKPANIMISATN------AVKVMDFGIARAIADSGNSVTQTAA 178
Query: 190 EFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLF---DPNLNDFQHIE 244
I ++ + E G + D++S C+ Y+++TGE F P +QH+
Sbjct: 179 ---VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVR 233
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 111/267 (41%), Gaps = 36/267 (13%)
Query: 20 IIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLK-ITISNHHEYQN 78
I R LG G V+L ++ +A+KV+ A L E QL + + I +H + N
Sbjct: 17 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPN 74
Query: 79 HVVKFLDHFTVLGDNGVHACIVFELA--GQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
+++ +F + ++ E A G E + ++ + ++ L Y
Sbjct: 75 -ILRLYGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 129
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA-YKNNAFEFDYIQ 195
H ++H D+K +N+L+ ++ L IAD G++ + ++
Sbjct: 130 HSK-RVIHRDIKPENLLLGSAGEL---------------KIADFGWSVHAPSSRRTTLCG 173
Query: 196 AREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHI-ERMTEILGDIP 254
++ E + G + VD+WS + Y+ + G+ F+ N +Q +R++ + P
Sbjct: 174 TLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFE--ANTYQETYKRISRVEFTFP 231
Query: 255 DKVCNQSRLKAEFYDEDGKLLSNNVEQ 281
D V +R D +LL +N Q
Sbjct: 232 DFVTEGAR------DLISRLLKHNPSQ 252
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 117/281 (41%), Gaps = 36/281 (12%)
Query: 15 ISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLK-ITISNH 73
+ + I R LG G V+L ++ +A+KV+ A L E QL + + I +H
Sbjct: 24 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSH 81
Query: 74 HEYQNHVVKFLDHFTVLGDNGVHACIVFELA--GQTLSEFKSINYLNMNCMKDISRQILK 131
+ N +++ +F + ++ E A G E + ++ + ++
Sbjct: 82 LRHPN-ILRLYGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 136
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA-YKNNAFE 190
L Y H ++H D+K +N+L+ ++ L IAD G++ + ++
Sbjct: 137 ALSYCHSK-RVIHRDIKPENLLLGSAGEL---------------KIADFGWSVHAPSSRR 180
Query: 191 FDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHI-ERMTEI 249
++ E++ G + VD+WS + Y+ + G+ F+ N +Q +R++ +
Sbjct: 181 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE--ANTYQETYKRISRV 238
Query: 250 LGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQE 290
PD V +R D +LL +N Q + + E
Sbjct: 239 EFTFPDFVTEGAR------DLISRLLKHNPSQRPMLREVLE 273
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 117/281 (41%), Gaps = 36/281 (12%)
Query: 15 ISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLK-ITISNH 73
+ + I R LG G V+L ++ +A+KV+ A L E QL + + I +H
Sbjct: 33 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA--QLEKAGVEHQLRREVEIQSH 90
Query: 74 HEYQNHVVKFLDHFTVLGDNGVHACIVFELA--GQTLSEFKSINYLNMNCMKDISRQILK 131
+ N +++ +F + ++ E A G E + ++ + ++
Sbjct: 91 LRHPN-ILRLYGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 145
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA-YKNNAFE 190
L Y H ++H D+K +N+L+ ++ L IAD G++ + ++
Sbjct: 146 ALSYCHSK-RVIHRDIKPENLLLGSAGEL---------------KIADFGWSVHAPSSRR 189
Query: 191 FDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHI-ERMTEI 249
++ E++ G + VD+WS + Y+ + G+ F+ N +Q +R++ +
Sbjct: 190 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE--ANTYQETYKRISRV 247
Query: 250 LGDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQE 290
PD V +R D +LL +N Q + + E
Sbjct: 248 EFTFPDFVTEGAR------DLISRLLKHNPSQRPMLREVLE 282
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 80/218 (36%), Gaps = 26/218 (11%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKV--MKGAPKFLHITRNEVQLLKITISNHHEYQN 78
I +LG G V + + +A K+ ++ P + E+Q+L H
Sbjct: 21 ISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVL------HECNSP 74
Query: 79 HVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYLHE 138
++V F F D + C+ G K + + +S +L+GL YL E
Sbjct: 75 YIVGFYGAF--YSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLRE 132
Query: 139 VCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK-NNAFEFDYIQAR 197
++H D+K NILV + + D G + + ++ ++ R
Sbjct: 133 KHQIMHRDVKPSNILVNSR---------------GEIKLCDFGVSGQLIDSMANSFVGTR 177
Query: 198 EFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDP 235
+ A E + G DIWS ++ G Y P
Sbjct: 178 SYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPIPP 215
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 114/311 (36%), Gaps = 67/311 (21%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQ 77
Y + +G G S C + T+ AVKV+ + R+ + ++I + Y
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKS------KRDPSEEIEILL----RYG 78
Query: 78 NH--VVKFLDHFTVLGDNGVHACIVFEL--AGQTLSEFKSINYLNMNCMKDISRQILKGL 133
H ++ D + D+G H +V EL G+ L + + + + I K +
Sbjct: 79 QHPNIITLKDVY----DDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTV 134
Query: 134 YYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK---NNAFE 190
YLH +VH DLK NIL + + L I D G+A + N
Sbjct: 135 EYLHSQ-GVVHRDLKPSNILYVDESGNPECL-----------RICDFGFAKQLRAENGLL 182
Query: 191 FDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEIL 250
F A EV+ + DIWS + Y M+ G + P N
Sbjct: 183 MTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG---YTPFANG----------P 229
Query: 251 GDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSMLH 310
D P+++ +R+ + + G G + S T DL+ MLH
Sbjct: 230 SDTPEEIL--TRIGSGKFTLSG-------------------GNWNTVSETAKDLVSKMLH 268
Query: 311 WDSDERFTAAQ 321
D +R TA Q
Sbjct: 269 VDPHQRLTAKQ 279
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 114/311 (36%), Gaps = 67/311 (21%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQ 77
Y + +G G S C + T+ AVKV+ + R+ + ++I + Y
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKS------KRDPSEEIEILL----RYG 78
Query: 78 NH--VVKFLDHFTVLGDNGVHACIVFEL--AGQTLSEFKSINYLNMNCMKDISRQILKGL 133
H ++ D + D+G H +V EL G+ L + + + + I K +
Sbjct: 79 QHPNIITLKDVY----DDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTV 134
Query: 134 YYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK---NNAFE 190
YLH +VH DLK NIL + + L I D G+A + N
Sbjct: 135 EYLHSQ-GVVHRDLKPSNILYVDESGNPECL-----------RICDFGFAKQLRAENGLL 182
Query: 191 FDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEIL 250
F A EV+ + DIWS + Y M+ G + P N
Sbjct: 183 MTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG---YTPFANG----------P 229
Query: 251 GDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSMLH 310
D P+++ +R+ + + G G + S T DL+ MLH
Sbjct: 230 SDTPEEIL--TRIGSGKFTLSG-------------------GNWNTVSETAKDLVSKMLH 268
Query: 311 WDSDERFTAAQ 321
D +R TA Q
Sbjct: 269 VDPHQRLTAKQ 279
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 97/223 (43%), Gaps = 30/223 (13%)
Query: 14 LISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNH 73
L Y ++KLG G V LC + T + A+K++K + + T N LL
Sbjct: 2 LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSS--VTTTSNSGALLD------ 53
Query: 74 HEYQNHVVKFLDHFTVLG-----DNGVHACIVFEL--AGQTLSEFKSINYLNMNCMKDIS 126
+ V+K LDH ++ ++ + +V E+ G+ E + I
Sbjct: 54 ---EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIM 110
Query: 127 RQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKN 186
+Q+L G YLH+ ++VH DLK +N+L+ E+ + +++ + + + ++G K
Sbjct: 111 KQVLSGTTYLHK-HNIVHRDLKPENLLL---ESKSRDALIKIVDFGLSAHF-EVGGKMKE 165
Query: 187 NAFEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTG 229
YI A VL K + D+WS I Y ++ G
Sbjct: 166 RLGTAYYI-------APEVLRKKYDEKCDVWSCGVILYILLCG 201
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 84/209 (40%), Gaps = 32/209 (15%)
Query: 35 CWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEY-QNHVVKFLDHFTVLGDN 93
C+ I + V K PK L + ++ + + + IS H HVV F F DN
Sbjct: 31 CFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFE---DN 87
Query: 94 GVHACIVFELAGQT--LSEFKSINYLNMNCMKDISRQILKGLYYLHEVCDLVHTDLKHDN 151
+V EL + L K L + RQI+ G YLH ++H DLK N
Sbjct: 88 DF-VFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR-NRVIHRDLKLGN 145
Query: 152 ILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQAR------EFRAAEVV 205
+ + +E L K I D G A K E+D + + + A EV+
Sbjct: 146 LFL--NEDLEVK-------------IGDFGLATK---VEYDGERKKVLCGTPNYIAPEVL 187
Query: 206 LGGKLGKPVDIWSTACITYQMVTGEYLFD 234
VD+WS CI Y ++ G+ F+
Sbjct: 188 SKKGHSFEVDVWSIGCIMYTLLVGKPPFE 216
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 84/209 (40%), Gaps = 32/209 (15%)
Query: 35 CWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEY-QNHVVKFLDHFTVLGDN 93
C+ I + V K PK L + ++ + + + IS H HVV F F DN
Sbjct: 57 CFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFE---DN 113
Query: 94 GVHACIVFELAGQT--LSEFKSINYLNMNCMKDISRQILKGLYYLHEVCDLVHTDLKHDN 151
+V EL + L K L + RQI+ G YLH ++H DLK N
Sbjct: 114 DF-VFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR-NRVIHRDLKLGN 171
Query: 152 ILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQAR------EFRAAEVV 205
+ + +E L K I D G A K E+D + + + A EV+
Sbjct: 172 LFL--NEDLEVK-------------IGDFGLATK---VEYDGERKKVLCGTPNYIAPEVL 213
Query: 206 LGGKLGKPVDIWSTACITYQMVTGEYLFD 234
VD+WS CI Y ++ G+ F+
Sbjct: 214 SKKGHSFEVDVWSIGCIMYTLLVGKPPFE 242
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 113/274 (41%), Gaps = 32/274 (11%)
Query: 20 IIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLK-ITISNHHEYQN 78
I R LG G V+L + +A+KV+ A L E QL + + I +H + N
Sbjct: 12 IGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPN 69
Query: 79 HVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYLHE 138
+++ +F V+ + + G E + ++ + ++ L Y H
Sbjct: 70 -ILRLYGYFH--DSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 139 VCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA-YKNNAFEFDYIQAR 197
++H D+K +N+L+ ++ L IAD G++ + ++
Sbjct: 127 K-KVIHRDIKPENLLLGSAGEL---------------KIADFGWSVHAPSSRRAALCGTL 170
Query: 198 EFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHI-ERMTEILGDIPDK 256
++ E++ G + VD+WS + Y+ + G+ F+ N +Q +R++ + PD
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE--ANTYQDTYKRISRVEFTFPDF 228
Query: 257 VCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQE 290
V +R D +LL +N Q + + E
Sbjct: 229 VTEGAR------DLISRLLKHNPSQRPMLREVLE 256
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 84/209 (40%), Gaps = 32/209 (15%)
Query: 35 CWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEY-QNHVVKFLDHFTVLGDN 93
C+ I + V K PK L + ++ + + + IS H HVV F F DN
Sbjct: 55 CFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFE---DN 111
Query: 94 GVHACIVFELAGQT--LSEFKSINYLNMNCMKDISRQILKGLYYLHEVCDLVHTDLKHDN 151
+V EL + L K L + RQI+ G YLH ++H DLK N
Sbjct: 112 DF-VFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHR-NRVIHRDLKLGN 169
Query: 152 ILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQAR------EFRAAEVV 205
+ + +E L K I D G A K E+D + + + A EV+
Sbjct: 170 LFL--NEDLEVK-------------IGDFGLATK---VEYDGERKKVLCGTPNYIAPEVL 211
Query: 206 LGGKLGKPVDIWSTACITYQMVTGEYLFD 234
VD+WS CI Y ++ G+ F+
Sbjct: 212 SKKGHSFEVDVWSIGCIMYTLLVGKPPFE 240
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 60/136 (44%), Gaps = 25/136 (18%)
Query: 119 MNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIA 178
M + DI+RQ +G+ YLH ++H DLK +NI + NT I
Sbjct: 119 MKKLIDIARQTARGMDYLH-AKSIIHRDLKSNNIFLHED---------------NTVKIG 162
Query: 179 DLGYAYKNNAF----EFDYIQAREFRAAEVVLGGKLGKP----VDIWSTACITYQMVTGE 230
D G A + + + +F+ + A V+ + P D+++ + Y+++TG+
Sbjct: 163 DFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
Query: 231 YLFDPNLNDFQHIERM 246
+ N+N+ I M
Sbjct: 223 LPYS-NINNRDQIIEM 237
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 60/136 (44%), Gaps = 25/136 (18%)
Query: 119 MNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIA 178
M + DI+RQ +G+ YLH ++H DLK +NI + NT I
Sbjct: 119 MKKLIDIARQTARGMDYLH-AKSIIHRDLKSNNIFLHED---------------NTVKIG 162
Query: 179 DLGYAYKNNAF----EFDYIQAREFRAAEVVLGGKLGKP----VDIWSTACITYQMVTGE 230
D G A + + + +F+ + A V+ + P D+++ + Y+++TG+
Sbjct: 163 DFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222
Query: 231 YLFDPNLNDFQHIERM 246
+ N+N+ I M
Sbjct: 223 LPYS-NINNRDQIIEM 237
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 27/126 (21%)
Query: 126 SRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK 185
+ +I GL++LH+ +++ DLK DN++ L SE IAD G +
Sbjct: 126 AAEISIGLFFLHKR-GIIYRDLKLDNVM-LDSE--------------GHIKIADFGMCKE 169
Query: 186 NNAFEFDYIQAREF------RAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLND 239
+ D + REF A E++ GK VD W+ + Y+M+ G+ FD D
Sbjct: 170 HM---MDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED 226
Query: 240 --FQHI 243
FQ I
Sbjct: 227 ELFQSI 232
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 96/243 (39%), Gaps = 58/243 (23%)
Query: 13 TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKV--MKGAPKFLHITRNEVQLLKITI 70
+ + +++ LG G + V L N T VAVK+ MK A + E+ + K+
Sbjct: 3 PFVEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML- 61
Query: 71 SNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISR--- 127
NH +VVKF H + + + +G L F I D R
Sbjct: 62 -NHE----NVVKFYGHRR---EGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFH 111
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA--YK 185
Q++ G+ YLH + + H D+K +N+L+ + L I+D G A ++
Sbjct: 112 QLMAGVVYLHGI-GITHRDIKPENLLLDERDNL---------------KISDFGLATVFR 155
Query: 186 NNAFE--------------FDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEY 231
N E + ++ REF A +PVD+WS + M+ GE
Sbjct: 156 YNNRERLLNKMCGTLPYVAPELLKRREFHA----------EPVDVWSCGIVLTAMLAGEL 205
Query: 232 LFD 234
+D
Sbjct: 206 PWD 208
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 114/275 (41%), Gaps = 34/275 (12%)
Query: 20 IIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLK-ITISNHHEYQN 78
I R LG G V+L ++ +A+KV+ A L E QL + + I +H + N
Sbjct: 15 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPN 72
Query: 79 HVVKFLDHFTVLGDNGVHACIVFELA--GQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
+++ +F + ++ E A G E + ++ + ++ L Y
Sbjct: 73 -ILRLYGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 127
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA-YKNNAFEFDYIQ 195
H ++H D+K +N+L+ ++ L IA+ G++ + ++
Sbjct: 128 HSK-RVIHRDIKPENLLLGSAGEL---------------KIANFGWSVHAPSSRRTTLCG 171
Query: 196 AREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPD 255
++ E++ G + VD+WS + Y+ + G+ F+ N + +R++ + PD
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ-ETYKRISRVEFTFPD 230
Query: 256 KVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQE 290
V +R D +LL +N Q + + E
Sbjct: 231 FVTEGAR------DLISRLLKHNPSQRPMLREVLE 259
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 97/223 (43%), Gaps = 30/223 (13%)
Query: 14 LISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNH 73
L Y ++KLG G V LC + T + A+K++K + + T N LL
Sbjct: 19 LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSS--VTTTSNSGALLD------ 70
Query: 74 HEYQNHVVKFLDHFTVLG-----DNGVHACIVFEL--AGQTLSEFKSINYLNMNCMKDIS 126
+ V+K LDH ++ ++ + +V E+ G+ E + I
Sbjct: 71 ---EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIM 127
Query: 127 RQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKN 186
+Q+L G YLH+ ++VH DLK +N+L+ E+ + +++ + + + ++G K
Sbjct: 128 KQVLSGTTYLHK-HNIVHRDLKPENLLL---ESKSRDALIKIVDFGLSAHF-EVGGKMKE 182
Query: 187 NAFEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTG 229
YI A VL K + D+WS I Y ++ G
Sbjct: 183 RLGTAYYI-------APEVLRKKYDEKCDVWSCGVILYILLCG 218
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 94/233 (40%), Gaps = 38/233 (16%)
Query: 13 TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKV--MKGAPKFLHITRNEVQLLKITI 70
+ + +++ LG G V L N T VAVK+ MK A + E+ + K+
Sbjct: 4 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKML- 62
Query: 71 SNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISR--- 127
NH +VVKF H + + + +G L F I D R
Sbjct: 63 -NHE----NVVKFYGHRR---EGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFH 112
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA---- 183
Q++ G+ YLH + + H D+K +N+L+ + L I+D G A
Sbjct: 113 QLMAGVVYLHGI-GITHRDIKPENLLLDERDNL---------------KISDFGLATVFR 156
Query: 184 YKNNAFEFDYIQAR-EFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFD 234
Y N + + + A E++ + +PVD+WS + M+ GE +D
Sbjct: 157 YNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 92/222 (41%), Gaps = 23/222 (10%)
Query: 15 ISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLK-ITISNH 73
I + I R LG G V+L + +A+KV+ + L E QL + I I +H
Sbjct: 14 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQ--LEKEGVEHQLRREIEIQSH 71
Query: 74 HEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGL 133
+ N +++ ++F ++ + F G+ E + + ++ L
Sbjct: 72 LRHPN-ILRMYNYFH--DRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADAL 128
Query: 134 YYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDY 193
+Y HE ++H D+K +N+L +G K L+ IAD G++ +
Sbjct: 129 HYCHER-KVIHRDIKPENLL------MGYKGELK---------IADFGWSVHAPSLRRRX 172
Query: 194 IQAR-EFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFD 234
+ ++ E++ G + VD+W + Y+ + G FD
Sbjct: 173 MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 94/233 (40%), Gaps = 38/233 (16%)
Query: 13 TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKV--MKGAPKFLHITRNEVQLLKITI 70
+ + +++ LG G V L N T VAVK+ MK A + E+ + K+
Sbjct: 3 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKML- 61
Query: 71 SNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISR--- 127
NH +VVKF H + + + +G L F I D R
Sbjct: 62 -NHE----NVVKFYGHRR---EGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFH 111
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA---- 183
Q++ G+ YLH + + H D+K +N+L+ + L I+D G A
Sbjct: 112 QLMAGVVYLHGI-GITHRDIKPENLLLDERDNL---------------KISDFGLATVFR 155
Query: 184 YKNNAFEFDYIQAR-EFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFD 234
Y N + + + A E++ + +PVD+WS + M+ GE +D
Sbjct: 156 YNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 115/276 (41%), Gaps = 36/276 (13%)
Query: 20 IIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLK-ITISNHHEYQN 78
I R LG G V+L ++ +A+KV+ A L E QL + + I +H + N
Sbjct: 14 IGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPN 71
Query: 79 HVVKFLDHFTVLGDNGVHACIVFELA--GQTLSEFKSINYLNMNCMKDISRQILKGLYYL 136
+++ +F + ++ E A G E + ++ + ++ L Y
Sbjct: 72 -ILRLYGYF----HDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 126
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA-YKNNAFEFDYIQ 195
H ++H D+K +N+L+ ++ L IA+ G++ + ++
Sbjct: 127 HSK-RVIHRDIKPENLLLGSAGEL---------------KIANFGWSVHAPSSRRTTLCG 170
Query: 196 AREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHI-ERMTEILGDIP 254
++ E++ G + VD+WS + Y+ + G+ F+ N +Q +R++ + P
Sbjct: 171 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE--ANTYQETYKRISRVEFTFP 228
Query: 255 DKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQE 290
D V +R D +LL +N Q + + E
Sbjct: 229 DFVTEGAR------DLISRLLKHNPSQRPMLREVLE 258
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 92/222 (41%), Gaps = 23/222 (10%)
Query: 15 ISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLK-ITISNH 73
I + I R LG G V+L + +A+KV+ + L E QL + I I +H
Sbjct: 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQ--LEKEGVEHQLRREIEIQSH 70
Query: 74 HEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGL 133
+ N +++ ++F ++ + F G+ E + + ++ L
Sbjct: 71 LRHPN-ILRMYNYFH--DRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADAL 127
Query: 134 YYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDY 193
+Y HE ++H D+K +N+L +G K L+ IAD G++ +
Sbjct: 128 HYCHER-KVIHRDIKPENLL------MGYKGELK---------IADFGWSVHAPSLRRRX 171
Query: 194 IQAR-EFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFD 234
+ ++ E++ G + VD+W + Y+ + G FD
Sbjct: 172 MCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 91/230 (39%), Gaps = 31/230 (13%)
Query: 12 DTLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITR--NEVQLLKIT 69
D L+ Y + +G G + V L +I T VA+K+M + R E++ LK
Sbjct: 6 DELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNL 65
Query: 70 ISNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQI 129
H HV++ N + + + G+ S + L+ + + RQI
Sbjct: 66 RHQHICQLYHVLE--------TANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQI 117
Query: 130 LKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAF 189
+ + Y+H H DLK +N+L ++ + + D G K
Sbjct: 118 VSAVAYVHSQ-GYAHRDLKPENLL---------------FDEYHKLKLIDFGLCAKPKGN 161
Query: 190 EFDYIQ----AREFRAAEVVLGGK-LGKPVDIWSTACITYQMVTGEYLFD 234
+ ++Q + + A E++ G LG D+WS + Y ++ G FD
Sbjct: 162 KDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFD 211
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 79/218 (36%), Gaps = 27/218 (12%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHV 80
++ LG G V L T Y A+K+++ K + I ++EV T++ QN
Sbjct: 10 LKLLGKGTFGKVILVREKATGRYYAMKILR---KEVIIAKDEVAH---TVTESRVLQNTR 63
Query: 81 VKFLDHFTVLGDNGVHACIVFELA--GQTLSEFKSINYLNMNCMKDISRQILKGLYYLHE 138
FL C V E A G+ + +I+ L YLH
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 139 VCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGY---AYKNNAFEFDYIQ 195
D+V+ D+K +N+++ I D G + A +
Sbjct: 124 R-DVVYRDIKLENLMLDKD---------------GHIKITDFGLCKEGISDGATMKXFCG 167
Query: 196 AREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLF 233
E+ A EV+ G+ VD W + Y+M+ G F
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 79/218 (36%), Gaps = 27/218 (12%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHV 80
++ LG G V L T Y A+K+++ K + I ++EV T++ QN
Sbjct: 10 LKLLGKGTFGKVILVREKATGRYYAMKILR---KEVIIAKDEVAH---TVTESRVLQNTR 63
Query: 81 VKFLDHFTVLGDNGVHACIVFELA--GQTLSEFKSINYLNMNCMKDISRQILKGLYYLHE 138
FL C V E A G+ + +I+ L YLH
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 139 VCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGY---AYKNNAFEFDYIQ 195
D+V+ D+K +N+++ I D G + A +
Sbjct: 124 R-DVVYRDIKLENLMLDKD---------------GHIKITDFGLCKEGISDGATMKXFCG 167
Query: 196 AREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLF 233
E+ A EV+ G+ VD W + Y+M+ G F
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 79/218 (36%), Gaps = 27/218 (12%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHV 80
++ LG G V L T Y A+K+++ K + I ++EV T++ QN
Sbjct: 10 LKLLGKGTFGKVILVREKATGRYYAMKILR---KEVIIAKDEVAH---TVTESRVLQNTR 63
Query: 81 VKFLDHFTVLGDNGVHACIVFELA--GQTLSEFKSINYLNMNCMKDISRQILKGLYYLHE 138
FL C V E A G+ + +I+ L YLH
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 139 VCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGY---AYKNNAFEFDYIQ 195
D+V+ D+K +N+++ I D G + A +
Sbjct: 124 R-DVVYRDIKLENLMLDKD---------------GHIKITDFGLCKEGISDGATMKXFCG 167
Query: 196 AREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLF 233
E+ A EV+ G+ VD W + Y+M+ G F
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 79/218 (36%), Gaps = 27/218 (12%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHV 80
++ LG G V L T Y A+K+++ K + I ++EV T++ QN
Sbjct: 15 LKLLGKGTFGKVILVREKATGRYYAMKILR---KEVIIAKDEVAH---TVTESRVLQNTR 68
Query: 81 VKFLDHFTVLGDNGVHACIVFELA--GQTLSEFKSINYLNMNCMKDISRQILKGLYYLHE 138
FL C V E A G+ + +I+ L YLH
Sbjct: 69 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 128
Query: 139 VCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGY---AYKNNAFEFDYIQ 195
D+V+ D+K +N+++ I D G + A +
Sbjct: 129 R-DVVYRDIKLENLMLDKD---------------GHIKITDFGLCKEGISDGATMKXFCG 172
Query: 196 AREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLF 233
E+ A EV+ G+ VD W + Y+M+ G F
Sbjct: 173 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 95/243 (39%), Gaps = 58/243 (23%)
Query: 13 TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKV--MKGAPKFLHITRNEVQLLKITI 70
+ + +++ LG G V L N T VAVK+ MK A + E+ + K+
Sbjct: 3 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKML- 61
Query: 71 SNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISR--- 127
NH +VVKF H + + + +G L F I D R
Sbjct: 62 -NHE----NVVKFYGHRR---EGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFH 111
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA--YK 185
Q++ G+ YLH + + H D+K +N+L+ + L I+D G A ++
Sbjct: 112 QLMAGVVYLHGI-GITHRDIKPENLLLDERDNL---------------KISDFGLATVFR 155
Query: 186 NNAFE--------------FDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEY 231
N E + ++ REF A +PVD+WS + M+ GE
Sbjct: 156 YNNRERLLNKMCGTLPYVAPELLKRREFHA----------EPVDVWSCGIVLTAMLAGEL 205
Query: 232 LFD 234
+D
Sbjct: 206 PWD 208
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 117/307 (38%), Gaps = 72/307 (23%)
Query: 24 LGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLH----ITRNEVQLLKITISNHHEYQNH 79
LG G S V L + T VA+K + A K L NE+ +L H+ ++
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCI--AKKALEGKEGSMENEIAVL-------HKIKHP 76
Query: 80 VVKFLDHFTVLGDNGVHACIVFEL-AGQTLSEFKSINYLNMNCMKDISR---QILKGLYY 135
+ LD ++G H ++ +L +G L F I +D SR Q+L + Y
Sbjct: 77 NIVALDDIY---ESGGHLYLIMQLVSGGEL--FDRIVEKGFYTERDASRLIFQVLDAVKY 131
Query: 136 LHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQ 195
LH++ +VH DLK +N+L + + + + + + + D G Y+
Sbjct: 132 LHDLG-IVHRDLKPENLLYYSLDEDSKIMISD----FGLSKMEDPGSVLSTACGTPGYV- 185
Query: 196 AREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPD 255
A EV+ K VD WS I Y ++ G + P
Sbjct: 186 -----APEVLAQKPYSKAVDCWSIGVIAYILLCG---YPP-------------------- 217
Query: 256 KVCNQSRLKAEFYDE-DGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSMLHWDSD 314
FYDE D KL EQI + + + S + D I ++ D +
Sbjct: 218 -----------FYDENDAKLF----EQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPE 262
Query: 315 ERFTAAQ 321
+RFT Q
Sbjct: 263 KRFTCEQ 269
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 79/218 (36%), Gaps = 27/218 (12%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHV 80
++ LG G V L T Y A+K+++ K + I ++EV T++ QN
Sbjct: 13 LKLLGKGTFGKVILVREKATGRYYAMKILR---KEVIIAKDEVAH---TVTESRVLQNTR 66
Query: 81 VKFLDHFTVLGDNGVHACIVFELA--GQTLSEFKSINYLNMNCMKDISRQILKGLYYLHE 138
FL C V E A G+ + +I+ L YLH
Sbjct: 67 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 126
Query: 139 VCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGY---AYKNNAFEFDYIQ 195
D+V+ D+K +N+++ I D G + A +
Sbjct: 127 R-DVVYRDIKLENLMLDKD---------------GHIKITDFGLCKEGISDGATMKTFCG 170
Query: 196 AREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLF 233
E+ A EV+ G+ VD W + Y+M+ G F
Sbjct: 171 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 208
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 79/218 (36%), Gaps = 27/218 (12%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHV 80
++ LG G V L T Y A+K+++ K + I ++EV T++ QN
Sbjct: 10 LKLLGKGTFGKVILVREKATGRYYAMKILR---KEVIIAKDEVAH---TVTESRVLQNTR 63
Query: 81 VKFLDHFTVLGDNGVHACIVFELA--GQTLSEFKSINYLNMNCMKDISRQILKGLYYLHE 138
FL C V E A G+ + +I+ L YLH
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 139 VCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGY---AYKNNAFEFDYIQ 195
D+V+ D+K +N+++ I D G + A +
Sbjct: 124 R-DVVYRDIKLENLMLDKD---------------GHIKITDFGLCKEGISDGATMKTFCG 167
Query: 196 AREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLF 233
E+ A EV+ G+ VD W + Y+M+ G F
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 56/127 (44%), Gaps = 19/127 (14%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK-- 185
Q+ + L Y+H + H D+K N+L L +T KL D G A +
Sbjct: 130 QLFRSLAYIHSF-GICHRDIKPQNLL-LDPDTAVLKLC-------------DFGSAKQLV 174
Query: 186 NNAFEFDYIQAREFRAAEVVLGGK-LGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIE 244
I +R +RA E++ G +D+WS C+ +++ G+ +F P + +
Sbjct: 175 RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF-PGDSGVDQLV 233
Query: 245 RMTEILG 251
+ ++LG
Sbjct: 234 EIIKVLG 240
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 79/218 (36%), Gaps = 27/218 (12%)
Query: 21 IRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHV 80
++ LG G V L T Y A+K+++ K + I ++EV T++ QN
Sbjct: 10 LKLLGKGTFGKVILVREKATGRYYAMKILR---KEVIIAKDEVAH---TVTESRVLQNTR 63
Query: 81 VKFLDHFTVLGDNGVHACIVFELA--GQTLSEFKSINYLNMNCMKDISRQILKGLYYLHE 138
FL C V E A G+ + +I+ L YLH
Sbjct: 64 HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123
Query: 139 VCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGY---AYKNNAFEFDYIQ 195
D+V+ D+K +N+++ I D G + A +
Sbjct: 124 R-DVVYRDIKLENLMLDKD---------------GHIKITDFGLCKEGISDGATMKTFCG 167
Query: 196 AREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLF 233
E+ A EV+ G+ VD W + Y+M+ G F
Sbjct: 168 TPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 56/127 (44%), Gaps = 19/127 (14%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK-- 185
Q+ + L Y+H + H D+K N+L L +T KL D G A +
Sbjct: 130 QLFRSLAYIHSF-GICHRDIKPQNLL-LDPDTAVLKLC-------------DFGSAKQLV 174
Query: 186 NNAFEFDYIQAREFRAAEVVLGGK-LGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIE 244
I +R +RA E++ G +D+WS C+ +++ G+ +F P + +
Sbjct: 175 RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF-PGDSGVDQLV 233
Query: 245 RMTEILG 251
+ ++LG
Sbjct: 234 EIIKVLG 240
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 56/127 (44%), Gaps = 19/127 (14%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK-- 185
Q+ + L Y+H + H D+K N+L L +T KL D G A +
Sbjct: 164 QLFRSLAYIHSF-GICHRDIKPQNLL-LDPDTAVLKLC-------------DFGSAKQLV 208
Query: 186 NNAFEFDYIQAREFRAAEVVLGGK-LGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIE 244
I +R +RA E++ G +D+WS C+ +++ G+ +F P + +
Sbjct: 209 RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF-PGDSGVDQLV 267
Query: 245 RMTEILG 251
+ ++LG
Sbjct: 268 EIIKVLG 274
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 56/127 (44%), Gaps = 19/127 (14%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK-- 185
Q+ + L Y+H + H D+K N+L L +T KL D G A +
Sbjct: 142 QLFRSLAYIHSF-GICHRDIKPQNLL-LDPDTAVLKLC-------------DFGSAKQLV 186
Query: 186 NNAFEFDYIQAREFRAAEVVLGGK-LGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIE 244
I +R +RA E++ G +D+WS C+ +++ G+ +F P + +
Sbjct: 187 RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF-PGDSGVDQLV 245
Query: 245 RMTEILG 251
+ ++LG
Sbjct: 246 EIIKVLG 252
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 56/127 (44%), Gaps = 19/127 (14%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK-- 185
Q+ + L Y+H + H D+K N+L L +T KL D G A +
Sbjct: 142 QLFRSLAYIHSF-GICHRDIKPQNLL-LDPDTAVLKLC-------------DFGSAKQLV 186
Query: 186 NNAFEFDYIQAREFRAAEVVLGGK-LGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIE 244
I +R +RA E++ G +D+WS C+ +++ G+ +F P + +
Sbjct: 187 RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF-PGDSGVDQLV 245
Query: 245 RMTEILG 251
+ ++LG
Sbjct: 246 EIIKVLG 252
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 56/127 (44%), Gaps = 19/127 (14%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK-- 185
Q+ + L Y+H + H D+K N+L L +T KL D G A +
Sbjct: 130 QLFRSLAYIHSF-GICHRDIKPQNLL-LDPDTAVLKLC-------------DFGSAKQLV 174
Query: 186 NNAFEFDYIQAREFRAAEVVLGGK-LGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIE 244
I +R +RA E++ G +D+WS C+ +++ G+ +F P + +
Sbjct: 175 RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF-PGDSGVDQLV 233
Query: 245 RMTEILG 251
+ ++LG
Sbjct: 234 EIIKVLG 240
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 56/127 (44%), Gaps = 19/127 (14%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK-- 185
Q+ + L Y+H + H D+K N+L L +T KL D G A +
Sbjct: 134 QLFRSLAYIHSF-GICHRDIKPQNLL-LDPDTAVLKLC-------------DFGSAKQLV 178
Query: 186 NNAFEFDYIQAREFRAAEVVLGGK-LGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIE 244
I +R +RA E++ G +D+WS C+ +++ G+ +F P + +
Sbjct: 179 RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF-PGDSGVDQLV 237
Query: 245 RMTEILG 251
+ ++LG
Sbjct: 238 EIIKVLG 244
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 56/127 (44%), Gaps = 19/127 (14%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK-- 185
Q+ + L Y+H + H D+K N+L L +T KL D G A +
Sbjct: 131 QLFRSLAYIHSF-GICHRDIKPQNLL-LDPDTAVLKLC-------------DFGSAKQLV 175
Query: 186 NNAFEFDYIQAREFRAAEVVLGGK-LGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIE 244
I +R +RA E++ G +D+WS C+ +++ G+ +F P + +
Sbjct: 176 RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF-PGDSGVDQLV 234
Query: 245 RMTEILG 251
+ ++LG
Sbjct: 235 EIIKVLG 241
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 56/127 (44%), Gaps = 19/127 (14%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK-- 185
Q+ + L Y+H + H D+K N+L L +T KL D G A +
Sbjct: 130 QLFRSLAYIHSF-GICHRDIKPQNLL-LDPDTAVLKLC-------------DFGSAKQLV 174
Query: 186 NNAFEFDYIQAREFRAAEVVLGGK-LGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIE 244
I +R +RA E++ G +D+WS C+ +++ G+ +F P + +
Sbjct: 175 RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF-PGDSGVDQLV 233
Query: 245 RMTEILG 251
+ ++LG
Sbjct: 234 EIIKVLG 240
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 56/127 (44%), Gaps = 19/127 (14%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK-- 185
Q+ + L Y+H + H D+K N+L L +T KL D G A +
Sbjct: 149 QLFRSLAYIHSF-GICHRDIKPQNLL-LDPDTAVLKLC-------------DFGSAKQLV 193
Query: 186 NNAFEFDYIQAREFRAAEVVLGGK-LGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIE 244
I +R +RA E++ G +D+WS C+ +++ G+ +F P + +
Sbjct: 194 RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF-PGDSGVDQLV 252
Query: 245 RMTEILG 251
+ ++LG
Sbjct: 253 EIIKVLG 259
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 113/310 (36%), Gaps = 67/310 (21%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQ 77
Y + +G G S C + T+ AVK++ + R+ + ++I + Y
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKS------KRDPTEEIEILL----RYG 73
Query: 78 NH--VVKFLDHFTVLGDNGVHACIVFEL--AGQTLSEFKSINYLNMNCMKDISRQILKGL 133
H ++ D + D+G + +V EL G+ L + + + + I K +
Sbjct: 74 QHPNIITLKDVY----DDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTV 129
Query: 134 YYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK---NNAFE 190
YLH +VH DLK NIL + + + I D G+A + N
Sbjct: 130 EYLH-AQGVVHRDLKPSNILYVDESGNPESI-----------RICDFGFAKQLRAENGLL 177
Query: 191 FDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEIL 250
F A EV+ DIWS + Y +TG + P N
Sbjct: 178 XTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTG---YTPFANGPD--------- 225
Query: 251 GDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSMLH 310
D P+++ +R+ + + G G+ S S T DL+ LH
Sbjct: 226 -DTPEEIL--ARIGSGKFSLSG-------------------GYWNSVSDTAKDLVSKXLH 263
Query: 311 WDSDERFTAA 320
D +R TAA
Sbjct: 264 VDPHQRLTAA 273
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 59/136 (43%), Gaps = 25/136 (18%)
Query: 119 MNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIA 178
M + DI+RQ +G+ YLH ++H DLK +NI + NT I
Sbjct: 107 MKKLIDIARQTARGMDYLH-AKSIIHRDLKSNNIFLHED---------------NTVKIG 150
Query: 179 DLGYAYKNNAF----EFDYIQAREFRAAEVVLGGKLGKP----VDIWSTACITYQMVTGE 230
D G A + + +F+ + A V+ + P D+++ + Y+++TG+
Sbjct: 151 DFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 210
Query: 231 YLFDPNLNDFQHIERM 246
+ N+N+ I M
Sbjct: 211 LPYS-NINNRDQIIEM 225
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 95/243 (39%), Gaps = 58/243 (23%)
Query: 13 TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKV--MKGAPKFLHITRNEVQLLKITI 70
+ + +++ LG G V L N T VAVK+ MK A + E+ + K+
Sbjct: 4 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML- 62
Query: 71 SNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISR--- 127
NH +VVKF H + + + +G L F I D R
Sbjct: 63 -NHE----NVVKFYGHRR---EGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFH 112
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA--YK 185
Q++ G+ YLH + + H D+K +N+L+ + L I+D G A ++
Sbjct: 113 QLMAGVVYLHGI-GITHRDIKPENLLLDERDNL---------------KISDFGLATVFR 156
Query: 186 NNAFE--------------FDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEY 231
N E + ++ REF A +PVD+WS + M+ GE
Sbjct: 157 YNNRERLLNKMCGTLPYVAPELLKRREFHA----------EPVDVWSCGIVLTAMLAGEL 206
Query: 232 LFD 234
+D
Sbjct: 207 PWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 95/243 (39%), Gaps = 58/243 (23%)
Query: 13 TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKV--MKGAPKFLHITRNEVQLLKITI 70
+ + +++ LG G V L N T VAVK+ MK A + E+ + K+
Sbjct: 4 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML- 62
Query: 71 SNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISR--- 127
NH +VVKF H + + + +G L F I D R
Sbjct: 63 -NHE----NVVKFYGHRR---EGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFH 112
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA--YK 185
Q++ G+ YLH + + H D+K +N+L+ + L I+D G A ++
Sbjct: 113 QLMAGVVYLHGI-GITHRDIKPENLLLDERDNL---------------KISDFGLATVFR 156
Query: 186 NNAFE--------------FDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEY 231
N E + ++ REF A +PVD+WS + M+ GE
Sbjct: 157 YNNRERLLNKMCGTLPYVAPELLKRREFHA----------EPVDVWSCGIVLTAMLAGEL 206
Query: 232 LFD 234
+D
Sbjct: 207 PWD 209
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 95/243 (39%), Gaps = 58/243 (23%)
Query: 13 TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKV--MKGAPKFLHITRNEVQLLKITI 70
+ + +++ LG G V L N T VAVK+ MK A + E+ + K+
Sbjct: 4 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML- 62
Query: 71 SNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISR--- 127
NH +VVKF H + + + +G L F I D R
Sbjct: 63 -NHE----NVVKFYGHRR---EGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFH 112
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA--YK 185
Q++ G+ YLH + + H D+K +N+L+ + L I+D G A ++
Sbjct: 113 QLMAGVVYLHGI-GITHRDIKPENLLLDERDNL---------------KISDFGLATVFR 156
Query: 186 NNAFE--------------FDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEY 231
N E + ++ REF A +PVD+WS + M+ GE
Sbjct: 157 YNNRERLLNKMCGTLPYVAPELLKRREFHA----------EPVDVWSCGIVLTAMLAGEL 206
Query: 232 LFD 234
+D
Sbjct: 207 PWD 209
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 80/212 (37%), Gaps = 24/212 (11%)
Query: 20 IIRKLGWGFSSTVWLCWNIETSSYVAVKVMKG--APKFLHITRNEVQLLKITISNHHEYQ 77
I+R LG G V L + Y A+KV+K + + + L ++I H
Sbjct: 10 ILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTH---- 65
Query: 78 NHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYLH 137
+++ F + + + G+ S + K + ++ L YLH
Sbjct: 66 PFIIRMWGTFQ--DAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLH 123
Query: 138 EVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQAR 197
D+++ DLK +NIL+ + + I D G+A +
Sbjct: 124 S-KDIIYRDLKPENILLDKNGHI---------------KITDFGFAKYVPDVTYXLCGTP 167
Query: 198 EFRAAEVVLGGKLGKPVDIWSTACITYQMVTG 229
++ A EVV K +D WS + Y+M+ G
Sbjct: 168 DYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 199
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 56/127 (44%), Gaps = 19/127 (14%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK-- 185
Q+ + L Y+H + H D+K N+L L +T KL D G A +
Sbjct: 138 QLFRSLAYIHSF-GICHRDIKPQNLL-LDPDTAVLKLC-------------DFGSAKQLV 182
Query: 186 NNAFEFDYIQAREFRAAEVVLGGK-LGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIE 244
I +R +RA E++ G +D+WS C+ +++ G+ +F P + +
Sbjct: 183 RGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIF-PGDSGVDQLV 241
Query: 245 RMTEILG 251
+ ++LG
Sbjct: 242 EIIKVLG 248
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 95/243 (39%), Gaps = 58/243 (23%)
Query: 13 TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKV--MKGAPKFLHITRNEVQLLKITI 70
+ + +++ LG G V L N T VAVK+ MK A + E+ + K+
Sbjct: 3 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML- 61
Query: 71 SNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISR--- 127
NH +VVKF H + + + +G L F I D R
Sbjct: 62 -NHE----NVVKFYGHRR---EGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFH 111
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA--YK 185
Q++ G+ YLH + + H D+K +N+L+ + L I+D G A ++
Sbjct: 112 QLMAGVVYLHGI-GITHRDIKPENLLLDERDNL---------------KISDFGLATVFR 155
Query: 186 NNAFE--------------FDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEY 231
N E + ++ REF A +PVD+WS + M+ GE
Sbjct: 156 YNNRERLLNKMCGTLPYVAPELLKRREFHA----------EPVDVWSCGIVLTAMLAGEL 205
Query: 232 LFD 234
+D
Sbjct: 206 PWD 208
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 95/234 (40%), Gaps = 53/234 (22%)
Query: 24 LGWGFSSTVWLCWNIETSSYVAVKVMK--GAPKF--------LHITRNEVQLLKITISNH 73
LG G SS V C + T AVK++ G F T EV +L+ +S H
Sbjct: 25 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR-KVSGH 83
Query: 74 HEYQNHVVKFLDHFTVLGDNGVHACIVFEL--AGQTLSEFKSINYLNMNCMKDISRQILK 131
++++ D + + +VF+L G+ L+ + I R +L+
Sbjct: 84 ----PNIIQLKDTY----ETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLE 135
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEF 191
+ LH++ ++VH DLK +NIL+ + + KL D G++ + + E
Sbjct: 136 VICALHKL-NIVHRDLKPENILL--DDDMNIKL-------------TDFGFSCQLDPGE- 178
Query: 192 DYIQAREFRAAEVVLGGKL------------GKPVDIWSTACITYQMVTGEYLF 233
+ RE L ++ GK VD+WST I Y ++ G F
Sbjct: 179 ---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 95/243 (39%), Gaps = 58/243 (23%)
Query: 13 TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKV--MKGAPKFLHITRNEVQLLKITI 70
+ + +++ LG G V L N T VAVK+ MK A + E+ + K+
Sbjct: 4 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML- 62
Query: 71 SNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISR--- 127
NH +VVKF H + + + +G L F I D R
Sbjct: 63 -NHE----NVVKFYGHRR---EGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFH 112
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA--YK 185
Q++ G+ YLH + + H D+K +N+L+ + L I+D G A ++
Sbjct: 113 QLMAGVVYLHGI-GITHRDIKPENLLLDERDNL---------------KISDFGLATVFR 156
Query: 186 NNAFE--------------FDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEY 231
N E + ++ REF A +PVD+WS + M+ GE
Sbjct: 157 YNNRERLLNKMCGTLPYVAPELLKRREFHA----------EPVDVWSCGIVLTAMLAGEL 206
Query: 232 LFD 234
+D
Sbjct: 207 PWD 209
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 95/234 (40%), Gaps = 53/234 (22%)
Query: 24 LGWGFSSTVWLCWNIETSSYVAVKVMK--GAPKF--------LHITRNEVQLLKITISNH 73
LG G SS V C + T AVK++ G F T EV +L+ +S H
Sbjct: 12 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR-KVSGH 70
Query: 74 HEYQNHVVKFLDHFTVLGDNGVHACIVFEL--AGQTLSEFKSINYLNMNCMKDISRQILK 131
++++ D + + +VF+L G+ L+ + I R +L+
Sbjct: 71 ----PNIIQLKDTY----ETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLE 122
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEF 191
+ LH++ ++VH DLK +NIL+ + + KL D G++ + + E
Sbjct: 123 VICALHKL-NIVHRDLKPENILL--DDDMNIKL-------------TDFGFSCQLDPGE- 165
Query: 192 DYIQAREFRAAEVVLGGKL------------GKPVDIWSTACITYQMVTGEYLF 233
+ RE L ++ GK VD+WST I Y ++ G F
Sbjct: 166 ---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 216
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 94/233 (40%), Gaps = 38/233 (16%)
Query: 13 TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKV--MKGAPKFLHITRNEVQLLKITI 70
+ + +++ LG G V L N T VAVK+ MK A + E+ + K+
Sbjct: 3 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML- 61
Query: 71 SNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISR--- 127
NH +VVKF H + + + +G L F I D R
Sbjct: 62 -NHE----NVVKFYGHRR---EGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFH 111
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA---- 183
Q++ G+ YLH + + H D+K +N+L+ + L I+D G A
Sbjct: 112 QLMAGVVYLHGI-GITHRDIKPENLLLDERDNL---------------KISDFGLATVFR 155
Query: 184 YKNNAFEFDYIQAR-EFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFD 234
Y N + + + A E++ + +PVD+WS + M+ GE +D
Sbjct: 156 YNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 93/230 (40%), Gaps = 32/230 (13%)
Query: 13 TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKV--MKGAPKFLHITRNEVQLLKITI 70
+ + +++ LG G V L N T VAVK+ MK A + E+ + K+
Sbjct: 3 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML- 61
Query: 71 SNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQIL 130
NH +VVKF H N + + + G+ + + + Q++
Sbjct: 62 -NHE----NVVKFYGHRR--EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM 114
Query: 131 KGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA----YKN 186
G+ YLH + + H D+K +N+L+ + L I+D G A Y N
Sbjct: 115 AGVVYLHGI-GITHRDIKPENLLLDERDNL---------------KISDFGLATVFRYNN 158
Query: 187 NAFEFDYIQAR-EFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFD 234
+ + + A E++ + +PVD+WS + M+ GE +D
Sbjct: 159 RERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 94/233 (40%), Gaps = 38/233 (16%)
Query: 13 TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKV--MKGAPKFLHITRNEVQLLKITI 70
+ + +++ LG G V L N T VAVK+ MK A + E+ + K+
Sbjct: 3 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML- 61
Query: 71 SNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISR--- 127
NH +VVKF H + + + +G L F I D R
Sbjct: 62 -NHE----NVVKFYGHRR---EGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFH 111
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA---- 183
Q++ G+ YLH + + H D+K +N+L+ + L I+D G A
Sbjct: 112 QLMAGVVYLHGI-GITHRDIKPENLLLDERDNL---------------KISDFGLATVFR 155
Query: 184 YKNNAFEFDYIQAR-EFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFD 234
Y N + + + A E++ + +PVD+WS + M+ GE +D
Sbjct: 156 YNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 109/271 (40%), Gaps = 44/271 (16%)
Query: 20 IIRKLGWGFSSTVWLCWNIETSSYVAVKVM------KGAPKFLHITRNEVQLLKITISNH 73
I R LG G V+L ++ +A+KV+ K + H R EV+ I +H
Sbjct: 16 IGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVE--HQLRREVE-----IQSH 68
Query: 74 HEYQNHVVKFLDHFTVLGDNGVHACIVFELA--GQTLSEFKSINYLNMNCMKDISRQILK 131
+ N +++ +F + ++ E A G E + ++ + ++
Sbjct: 69 LRHPN-ILRLYGYF----HDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELAN 123
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEF 191
L Y H ++H D+K +N+L+ ++ L IAD G++ +
Sbjct: 124 ALSYCHSK-RVIHRDIKPENLLLGSNGEL---------------KIADFGWSVHAPSSRR 167
Query: 192 DYIQAR-EFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEIL 250
D + ++ E++ G + VD+WS + Y+ + G F+ + + R++ +
Sbjct: 168 DTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQ-ETYRRISRVE 226
Query: 251 GDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQ 281
PD V +R D +LL +N Q
Sbjct: 227 FTFPDFVTEGAR------DLISRLLKHNASQ 251
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 95/243 (39%), Gaps = 58/243 (23%)
Query: 13 TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKV--MKGAPKFLHITRNEVQLLKITI 70
+ + +++ LG G V L N T VAVK+ MK A + E+ + K+
Sbjct: 2 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML- 60
Query: 71 SNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISR--- 127
NH +VVKF H + + + +G L F I D R
Sbjct: 61 -NHE----NVVKFYGHRR---EGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFH 110
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA--YK 185
Q++ G+ YLH + + H D+K +N+L+ + L I+D G A ++
Sbjct: 111 QLMAGVVYLHGI-GITHRDIKPENLLLDERDNL---------------KISDFGLATVFR 154
Query: 186 NNAFE--------------FDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEY 231
N E + ++ REF A +PVD+WS + M+ GE
Sbjct: 155 YNNRERLLNKMCGTLPYVAPELLKRREFHA----------EPVDVWSCGIVLTAMLAGEL 204
Query: 232 LFD 234
+D
Sbjct: 205 PWD 207
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 95/243 (39%), Gaps = 58/243 (23%)
Query: 13 TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKV--MKGAPKFLHITRNEVQLLKITI 70
+ + +++ LG G V L N T VAVK+ MK A + E+ + K+
Sbjct: 4 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML- 62
Query: 71 SNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISR--- 127
NH +VVKF H + + + +G L F I D R
Sbjct: 63 -NHE----NVVKFYGHRR---EGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFH 112
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA--YK 185
Q++ G+ YLH + + H D+K +N+L+ + L I+D G A ++
Sbjct: 113 QLMAGVVYLHGI-GITHRDIKPENLLLDERDNL---------------KISDFGLATVFR 156
Query: 186 NNAFE--------------FDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEY 231
N E + ++ REF A +PVD+WS + M+ GE
Sbjct: 157 YNNRERLLNKMCGTLPYVAPELLKRREFHA----------EPVDVWSCGIVLTAMLAGEL 206
Query: 232 LFD 234
+D
Sbjct: 207 PWD 209
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 95/243 (39%), Gaps = 58/243 (23%)
Query: 13 TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKV--MKGAPKFLHITRNEVQLLKITI 70
+ + +++ LG G V L N T VAVK+ MK A + E+ + K+
Sbjct: 3 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML- 61
Query: 71 SNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISR--- 127
NH +VVKF H + + + +G L F I D R
Sbjct: 62 -NHE----NVVKFYGHRR---EGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFH 111
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA--YK 185
Q++ G+ YLH + + H D+K +N+L+ + L I+D G A ++
Sbjct: 112 QLMAGVVYLHGI-GITHRDIKPENLLLDERDNL---------------KISDFGLATVFR 155
Query: 186 NNAFE--------------FDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEY 231
N E + ++ REF A +PVD+WS + M+ GE
Sbjct: 156 YNNRERLLNKMCGTLPYVAPELLKRREFHA----------EPVDVWSCGIVLTAMLAGEL 205
Query: 232 LFD 234
+D
Sbjct: 206 PWD 208
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 95/243 (39%), Gaps = 58/243 (23%)
Query: 13 TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKV--MKGAPKFLHITRNEVQLLKITI 70
+ + +++ LG G V L N T VAVK+ MK A + E+ + K+
Sbjct: 3 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML- 61
Query: 71 SNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISR--- 127
NH +VVKF H + + + +G L F I D R
Sbjct: 62 -NHE----NVVKFYGHRR---EGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFH 111
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA--YK 185
Q++ G+ YLH + + H D+K +N+L+ + L I+D G A ++
Sbjct: 112 QLMAGVVYLHGI-GITHRDIKPENLLLDERDNL---------------KISDFGLATVFR 155
Query: 186 NNAFE--------------FDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEY 231
N E + ++ REF A +PVD+WS + M+ GE
Sbjct: 156 YNNRERLLNKMCGTLPYVAPELLKRREFHA----------EPVDVWSCGIVLTAMLAGEL 205
Query: 232 LFD 234
+D
Sbjct: 206 PWD 208
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 92/236 (38%), Gaps = 41/236 (17%)
Query: 11 GDTLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITI 70
G I Y + LG G V + + T VAVK++ R +++ L +
Sbjct: 6 GRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKIL---------NRQKIRSLDVVG 56
Query: 71 SNHHEYQN-------HVVKFLDHFTVLGDNGVHACIVFELAGQTLSEF--KSINYLNMNC 121
E QN H++K + V+ ++ ++G L ++ K M
Sbjct: 57 KIKREIQNLKLFRHPHIIKL---YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEA 113
Query: 122 MKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLG 181
+ + +QIL + Y H +VH DLK +N+L+ + IAD G
Sbjct: 114 RR-LFQQILSAVDYCHRHM-VVHRDLKPENVLL---------------DAHMNAKIADFG 156
Query: 182 YAYKNNAFEF--DYIQAREFRAAEVVLGGKLGKP-VDIWSTACITYQMVTGEYLFD 234
+ + EF + + A EV+ G P VDIWS I Y ++ G FD
Sbjct: 157 LSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 95/243 (39%), Gaps = 58/243 (23%)
Query: 13 TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKV--MKGAPKFLHITRNEVQLLKITI 70
+ + +++ LG G V L N T VAVK+ MK A + E+ + K+
Sbjct: 3 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML- 61
Query: 71 SNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISR--- 127
NH +VVKF H + + + +G L F I D R
Sbjct: 62 -NHE----NVVKFYGHRR---EGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFH 111
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA--YK 185
Q++ G+ YLH + + H D+K +N+L+ + L I+D G A ++
Sbjct: 112 QLMAGVVYLHGI-GITHRDIKPENLLLDERDNL---------------KISDFGLATVFR 155
Query: 186 NNAFE--------------FDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEY 231
N E + ++ REF A +PVD+WS + M+ GE
Sbjct: 156 YNNRERLLNKMCGTLPYVAPELLKRREFHA----------EPVDVWSCGIVLTAMLAGEL 205
Query: 232 LFD 234
+D
Sbjct: 206 PWD 208
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 94/240 (39%), Gaps = 52/240 (21%)
Query: 13 TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKV--MKGAPKFLHITRNEVQLLKITI 70
+ + +++ LG G V L N T VAVK+ MK A + E+ + K+
Sbjct: 3 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML- 61
Query: 71 SNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQIL 130
NH +VVKF H N + + + G+ + + + Q++
Sbjct: 62 -NHE----NVVKFYGHRR--EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM 114
Query: 131 KGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA--YKNNA 188
G+ YLH + + H D+K +N+L+ + L I+D G A ++ N
Sbjct: 115 AGVVYLHGI-GITHRDIKPENLLLDERDNL---------------KISDFGLATVFRYNN 158
Query: 189 FE--------------FDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFD 234
E + ++ REF A +PVD+WS + M+ GE +D
Sbjct: 159 RERLLNKMCGTLPYVAPELLKRREFHA----------EPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 94/240 (39%), Gaps = 52/240 (21%)
Query: 13 TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKV--MKGAPKFLHITRNEVQLLKITI 70
+ + +++ LG G V L N T VAVK+ MK A + E+ + K+
Sbjct: 3 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML- 61
Query: 71 SNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQIL 130
NH +VVKF H N + + + G+ + + + Q++
Sbjct: 62 -NHE----NVVKFYGHRR--EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM 114
Query: 131 KGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA--YKNNA 188
G+ YLH + + H D+K +N+L+ + L I+D G A ++ N
Sbjct: 115 AGVVYLHGI-GITHRDIKPENLLLDERDNL---------------KISDFGLATVFRYNN 158
Query: 189 FE--------------FDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFD 234
E + ++ REF A +PVD+WS + M+ GE +D
Sbjct: 159 RERLLNKMCGTLPYVAPELLKRREFHA----------EPVDVWSCGIVLTAMLAGELPWD 208
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 94/240 (39%), Gaps = 52/240 (21%)
Query: 13 TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKV--MKGAPKFLHITRNEVQLLKITI 70
+ + +++ LG G V L N T VAVK+ MK A + E+ + K+
Sbjct: 4 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML- 62
Query: 71 SNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQIL 130
NH +VVKF H N + + + G+ + + + Q++
Sbjct: 63 -NHE----NVVKFYGHRR--EGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLM 115
Query: 131 KGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA--YKNNA 188
G+ YLH + + H D+K +N+L+ + L I+D G A ++ N
Sbjct: 116 AGVVYLHGI-GITHRDIKPENLLLDERDNL---------------KISDFGLATVFRYNN 159
Query: 189 FE--------------FDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFD 234
E + ++ REF A +PVD+WS + M+ GE +D
Sbjct: 160 RERLLNKMCGTLPYVAPELLKRREFHA----------EPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 84/220 (38%), Gaps = 36/220 (16%)
Query: 24 LGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQN---HV 80
LG G + V C++ T A+K++ +PK R EV +HH + H+
Sbjct: 37 LGLGVNGKVLECFHRRTGQKCALKLLYDSPK----ARQEV--------DHHWQASGGPHI 84
Query: 81 VKFLDHFTVLGDNGVHACIVFEL--AGQTLSEF--KSINYLNMNCMKDISRQILKGLYYL 136
V LD + + I+ E G+ S + +I R I + +L
Sbjct: 85 VCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFL 144
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H ++ H D+K +N+L + E VL T D G+A +
Sbjct: 145 HSH-NIAHRDVKPENLLYTSKEKDA---------VLKLT---DFGFAKETTQNALQTPCY 191
Query: 197 REFRAAEVVLGG-KLGKPVDIWSTACITYQMVTGEYLFDP 235
+ A VLG K K D+WS I Y ++ G F P
Sbjct: 192 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG---FPP 228
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 117/307 (38%), Gaps = 72/307 (23%)
Query: 24 LGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLH----ITRNEVQLLKITISNHHEYQNH 79
LG G S V L + T VA+K + A + L NE+ +L H+ ++
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCI--AKEALEGKEGSMENEIAVL-------HKIKHP 76
Query: 80 VVKFLDHFTVLGDNGVHACIVFEL-AGQTLSEFKSINYLNMNCMKDISR---QILKGLYY 135
+ LD ++G H ++ +L +G L F I +D SR Q+L + Y
Sbjct: 77 NIVALDDIY---ESGGHLYLIMQLVSGGEL--FDRIVEKGFYTERDASRLIFQVLDAVKY 131
Query: 136 LHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQ 195
LH++ +VH DLK +N+L + + + + + + + D G Y+
Sbjct: 132 LHDLG-IVHRDLKPENLLYYSLDEDSKIMISD----FGLSKMEDPGSVLSTACGTPGYV- 185
Query: 196 AREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPD 255
A EV+ K VD WS I Y ++ G + P
Sbjct: 186 -----APEVLAQKPYSKAVDCWSIGVIAYILLCG---YPP-------------------- 217
Query: 256 KVCNQSRLKAEFYDE-DGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSMLHWDSD 314
FYDE D KL EQI + + + S + D I ++ D +
Sbjct: 218 -----------FYDENDAKLF----EQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPE 262
Query: 315 ERFTAAQ 321
+RFT Q
Sbjct: 263 KRFTCEQ 269
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 84/220 (38%), Gaps = 36/220 (16%)
Query: 24 LGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQN---HV 80
LG G + V C++ T A+K++ +PK R EV +HH + H+
Sbjct: 18 LGLGVNGKVLECFHRRTGQKCALKLLYDSPK----ARQEV--------DHHWQASGGPHI 65
Query: 81 VKFLDHFTVLGDNGVHACIVFEL--AGQTLSEF--KSINYLNMNCMKDISRQILKGLYYL 136
V LD + + I+ E G+ S + +I R I + +L
Sbjct: 66 VCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFL 125
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQA 196
H ++ H D+K +N+L + E VL T D G+A +
Sbjct: 126 HSH-NIAHRDVKPENLLYTSKEKDA---------VLKLT---DFGFAKETTQNALQTPCY 172
Query: 197 REFRAAEVVLGG-KLGKPVDIWSTACITYQMVTGEYLFDP 235
+ A VLG K K D+WS I Y ++ G F P
Sbjct: 173 TPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG---FPP 209
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 76/194 (39%), Gaps = 32/194 (16%)
Query: 105 GQTLSEFKSINYLNMNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKL 164
GQT+ E + + I+ I+K L +LH ++H D+K N+L+ LGQ
Sbjct: 103 GQTIPE---------DILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLI---NALGQ-- 148
Query: 165 ALEVYEVLNTTNIADLGYAYKNNAFEFDYIQAREFRAAEVV---LGGKLGKPV--DIWST 219
+ + GY + A + D + + A E + L K G V DIWS
Sbjct: 149 -------VKMCDFGISGYLVDDVAKDID-AGCKPYMAPERINPELNQK-GYSVKSDIWSL 199
Query: 220 ACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDKVCNQSRLKAEFYDEDGKLLSNNV 279
++ + +D FQ ++++ E P + AEF D + L N
Sbjct: 200 GITMIELAILRFPYDSWGTPFQQLKQVVE----EPSPQLPADKFSAEFVDFTSQCLKKNS 255
Query: 280 EQISLTHHLQERGF 293
++ L + F
Sbjct: 256 KERPTYPELMQHPF 269
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 104/283 (36%), Gaps = 16/283 (5%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQ 77
+ ++ +G G V+ +++T A+KVM + E+ +LK S+H
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLK-KYSHHRNIA 84
Query: 78 NHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSI--NYLNMNCMKDISRQILKGLYY 135
+ F+ D+ + + F AG K+ N L + I R+IL+GL +
Sbjct: 85 TYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSH 144
Query: 136 LHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQ 195
LH+ ++H D+K N+L LT + + V L+ T +N Y
Sbjct: 145 LHQ-HKVIHRDIKGQNVL-LTENAEVKLVDFGVSAQLDRT------VGRRNTFIGTPYWM 196
Query: 196 AREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPD 255
A E A + D+WS +M G P L D H R ++ P
Sbjct: 197 APEVIACDENPDATYDFKSDLWSLGITAIEMAEGA----PPLCDM-HPMRALFLIPRNPA 251
Query: 256 KVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSES 298
+ +F L N Q T L + F + +
Sbjct: 252 PRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQP 294
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 75/193 (38%), Gaps = 30/193 (15%)
Query: 105 GQTLSEFKSINYLNMNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKL 164
GQT+ E + + I+ I+K L +LH ++H D+K N+L+ LGQ
Sbjct: 130 GQTIPE---------DILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLI---NALGQ-- 175
Query: 165 ALEVYEVLNTTNIADLGYAYKNNAFEFDYIQAREFRAAEVVLG--GKLGKPV--DIWSTA 220
+ + GY + A + D + + A E + + G V DIWS
Sbjct: 176 -------VKXCDFGISGYLVDDVAKDID-AGCKPYXAPERINPELNQKGYSVKSDIWSLG 227
Query: 221 CITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDKVCNQSRLKAEFYDEDGKLLSNNVE 280
++ + +D FQ ++++ E P + AEF D + L N +
Sbjct: 228 ITXIELAILRFPYDSWGTPFQQLKQVVE----EPSPQLPADKFSAEFVDFTSQCLKKNSK 283
Query: 281 QISLTHHLQERGF 293
+ L + F
Sbjct: 284 ERPTYPELXQHPF 296
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 74/198 (37%), Gaps = 54/198 (27%)
Query: 127 RQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKN 186
RQ+L +YYLH + +VH DLK +N+L + + + + I+D G +
Sbjct: 127 RQVLDAVYYLHRM-GIVHRDLKPENLLYYSQDEESKIM------------ISDFGLSKME 173
Query: 187 NAFEF--DYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIE 244
+ + A EV+ K VD WS I Y ++ G + P
Sbjct: 174 GKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG---YPP--------- 221
Query: 245 RMTEILGDIPDKVCNQSRLKAEFYDE-DGKLLSNNVEQISLTHHLQERGFSKSESLTFSD 303
FYDE D KL EQI + + + S + D
Sbjct: 222 ----------------------FYDENDSKLF----EQILKAEYEFDSPYWDDISDSAKD 255
Query: 304 LILSMLHWDSDERFTAAQ 321
I +++ D ++R+T Q
Sbjct: 256 FIRNLMEKDPNKRYTCEQ 273
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 118/307 (38%), Gaps = 72/307 (23%)
Query: 24 LGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLH----ITRNEVQLLKITISNHHEYQNH 79
LG G S V L + T VA+K + A + L NE+ +L H+ ++
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCI--AKEALEGKEGSMENEIAVL-------HKIKHP 76
Query: 80 VVKFLDHFTVLGDNGVHACIVFEL-AGQTLSEFKSINYLNMNCMKDISR---QILKGLYY 135
+ LD + ++G H ++ +L +G L F I +D SR Q+L + Y
Sbjct: 77 NIVALDD---IYESGGHLYLIMQLVSGGEL--FDRIVEKGFYTERDASRLIFQVLDAVKY 131
Query: 136 LHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQ 195
LH++ +VH DLK +N+L + + + + + + + D G Y+
Sbjct: 132 LHDLG-IVHRDLKPENLLYYSLDEDSKIMISD----FGLSKMEDPGSVLSTACGTPGYV- 185
Query: 196 AREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPD 255
A EV+ K VD WS I Y ++ G + P
Sbjct: 186 -----APEVLAQKPYSKAVDCWSIGVIAYILLCG---YPP-------------------- 217
Query: 256 KVCNQSRLKAEFYDE-DGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSMLHWDSD 314
FYDE D KL EQI + + + S + D I ++ D +
Sbjct: 218 -----------FYDENDAKLF----EQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPE 262
Query: 315 ERFTAAQ 321
+RFT Q
Sbjct: 263 KRFTCEQ 269
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 118/307 (38%), Gaps = 72/307 (23%)
Query: 24 LGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLH----ITRNEVQLLKITISNHHEYQNH 79
LG G S V L + T VA+K + A + L NE+ +L H+ ++
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCI--AKEALEGKEGSMENEIAVL-------HKIKHP 76
Query: 80 VVKFLDHFTVLGDNGVHACIVFEL-AGQTLSEFKSINYLNMNCMKDISR---QILKGLYY 135
+ LD + ++G H ++ +L +G L F I +D SR Q+L + Y
Sbjct: 77 NIVALDD---IYESGGHLYLIMQLVSGGEL--FDRIVEKGFYTERDASRLIFQVLDAVKY 131
Query: 136 LHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQ 195
LH++ +VH DLK +N+L + + + + + + + D G Y+
Sbjct: 132 LHDLG-IVHRDLKPENLLYYSLDEDSKIMISD----FGLSKMEDPGSVLSTACGTPGYV- 185
Query: 196 AREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPD 255
A EV+ K VD WS I Y ++ G + P
Sbjct: 186 -----APEVLAQKPYSKAVDCWSIGVIAYILLCG---YPP-------------------- 217
Query: 256 KVCNQSRLKAEFYDE-DGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSMLHWDSD 314
FYDE D KL EQI + + + S + D I ++ D +
Sbjct: 218 -----------FYDENDAKLF----EQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPE 262
Query: 315 ERFTAAQ 321
+RFT Q
Sbjct: 263 KRFTCEQ 269
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 94/230 (40%), Gaps = 45/230 (19%)
Query: 24 LGWGFSSTVWLCWNIETSSYVAVKVM--KGAPKF--------LHITRNEVQLLKITISNH 73
LG G SS V C + T AVK++ G F T EV +L+ +S H
Sbjct: 25 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR-KVSGH 83
Query: 74 HEYQNHVVKFLDHFTVLGDNGVHACIVFEL--AGQTLSEFKSINYLNMNCMKDISRQILK 131
++++ D + + +VF+L G+ L+ + I R +L+
Sbjct: 84 ----PNIIQLKDTY----ETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLE 135
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFE- 190
+ LH++ ++VH DLK +NIL+ + + KL D G++ + + E
Sbjct: 136 VICALHKL-NIVHRDLKPENILL--DDDMNIKL-------------TDFGFSCQLDPGEK 179
Query: 191 -FDYIQAREFRAAEVVLGG------KLGKPVDIWSTACITYQMVTGEYLF 233
+ A E++ GK VD+WST I Y ++ G F
Sbjct: 180 LRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 95/243 (39%), Gaps = 58/243 (23%)
Query: 13 TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKV--MKGAPKFLHITRNEVQLLKITI 70
+ + +++ LG G V L N T VAVK+ MK A + N + + I
Sbjct: 4 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA---VDCPENIKKEICINA 60
Query: 71 SNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISR--- 127
+HE +VVKF H + + + +G L F I D R
Sbjct: 61 MLNHE---NVVKFYGHRR---EGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFH 112
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA--YK 185
Q++ G+ YLH + + H D+K +N+L+ + L I+D G A ++
Sbjct: 113 QLMAGVVYLHGI-GITHRDIKPENLLLDERDNL---------------KISDFGLATVFR 156
Query: 186 NNAFE--------------FDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEY 231
N E + ++ REF A +PVD+WS + M+ GE
Sbjct: 157 YNNRERLLNKMCGTLPYVAPELLKRREFHA----------EPVDVWSCGIVLTAMLAGEL 206
Query: 232 LFD 234
+D
Sbjct: 207 PWD 209
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 94/241 (39%), Gaps = 34/241 (14%)
Query: 23 KLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVVK 82
++G G VW +T +AVK M+ + + N+ L+ + + ++V+
Sbjct: 32 EMGSGTCGQVWKMRFRKTGHVIAVKQMR---RSGNKEENKRILMDLDVVLKSHDCPYIVQ 88
Query: 83 FLDHFTVLGDNGVHACIVFELAGQTLSEFKSI--NYLNMNCMKDISRQILKGLYYLHEVC 140
F D I EL G + K + + ++ I+K LYYL E
Sbjct: 89 CFGTFITNTD----VFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKH 144
Query: 141 DLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK--NNAFEFDYIQARE 198
++H D+K NIL+ + GQ + D G + + ++ +
Sbjct: 145 GVIHRDVKPSNILL---DERGQ------------IKLCDFGISGRLVDDKAKDRSAGCAA 189
Query: 199 FRAAEVVLGGKLGKP-----VDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDI 253
+ A E + KP D+WS ++ TG++ + DF E +T++L +
Sbjct: 190 YMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDF---EVLTKVLQEE 246
Query: 254 P 254
P
Sbjct: 247 P 247
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 55/271 (20%), Positives = 109/271 (40%), Gaps = 44/271 (16%)
Query: 20 IIRKLGWGFSSTVWLCWNIETSSYVAVKVM------KGAPKFLHITRNEVQLLKITISNH 73
I R LG G V+L ++ +A+KV+ K + H R EV+ I +H
Sbjct: 16 IGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVE--HQLRREVE-----IQSH 68
Query: 74 HEYQNHVVKFLDHFTVLGDNGVHACIVFELA--GQTLSEFKSINYLNMNCMKDISRQILK 131
+ N +++ +F + ++ E A G E + ++ + ++
Sbjct: 69 LRHPN-ILRLYGYF----HDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELAN 123
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA-YKNNAFE 190
L Y H ++H D+K +N+L+ ++ L IAD G++ + ++
Sbjct: 124 ALSYCHSK-RVIHRDIKPENLLLGSNGEL---------------KIADFGWSVHAPSSRR 167
Query: 191 FDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEIL 250
++ E++ G + VD+WS + Y+ + G F+ + + R++ +
Sbjct: 168 TTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQ-ETYRRISRVE 226
Query: 251 GDIPDKVCNQSRLKAEFYDEDGKLLSNNVEQ 281
PD V +R D +LL +N Q
Sbjct: 227 FTFPDFVTEGAR------DLISRLLKHNASQ 251
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 81/201 (40%), Gaps = 40/201 (19%)
Query: 122 MKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLG 181
+ +I RQI L+YLH + H D+K +N L T+++ KL D G
Sbjct: 170 ISNIMRQIFSALHYLHNQ-GICHRDIKPENFLFSTNKSFEIKL-------------VDFG 215
Query: 182 YA---YKNNAFEFDYIQARE----FRAAEVV--LGGKLGKPVDIWSTACITYQMVTGEYL 232
+ YK N E+ + + F A EV+ G D WS + + ++ G
Sbjct: 216 LSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVP 275
Query: 233 FDPNLNDFQHIERMTEILGDIPDKVC----NQSRLKAEFYDEDGKLLSNNV-EQISLTHH 287
F P +ND I ++ + K+C N + L D LL+ NV E+
Sbjct: 276 F-PGVNDADTISQV------LNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRA 328
Query: 288 LQERGFSKSESLTFSDLILSM 308
LQ S+ FSD I M
Sbjct: 329 LQHPWISQ-----FSDKIYKM 344
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 35.8 bits (81), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 25/128 (19%)
Query: 124 DISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA 183
DI+RQ +G+ YLH ++H DLK +NI ++E L T I D G A
Sbjct: 136 DIARQTAQGMDYLH-AKSIIHRDLKSNNIF--------------LHEDL-TVKIGDFGLA 179
Query: 184 YKNNAF----EFDYIQAREFRAAEVVLGGKLGKP----VDIWSTACITYQMVTGEYLFDP 235
+ + + +F+ + A V+ + P D+++ + Y+++TG+ +
Sbjct: 180 TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS- 238
Query: 236 NLNDFQHI 243
N+N+ I
Sbjct: 239 NINNRDQI 246
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 35.8 bits (81), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 25/128 (19%)
Query: 124 DISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA 183
DI+RQ +G+ YLH ++H DLK +NI ++E L T I D G A
Sbjct: 128 DIARQTAQGMDYLH-AKSIIHRDLKSNNIF--------------LHEDL-TVKIGDFGLA 171
Query: 184 YKNNAF----EFDYIQAREFRAAEVVLGGKLGKP----VDIWSTACITYQMVTGEYLFDP 235
+ + + +F+ + A V+ + P D+++ + Y+++TG+ +
Sbjct: 172 TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS- 230
Query: 236 NLNDFQHI 243
N+N+ I
Sbjct: 231 NINNRDQI 238
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 56/134 (41%), Gaps = 16/134 (11%)
Query: 99 IVFE-LAGQTLSEFKSINYLNMNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTS 157
I+ E L G + + L+ + I R+ILKGL YLH +H D+K N+L+ S
Sbjct: 82 IIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKK-IHRDIKAANVLL--S 138
Query: 158 ETLGQKLA-LEVYEVLNTTNIADLGYAYKNNAFEFDYIQAREFRAAEVVLGGKLGKPVDI 216
E KLA V L T I K N F + + A EV+ DI
Sbjct: 139 EHGEVKLADFGVAGQLTDTQI-------KRNTF----VGTPFWMAPEVIKQSAYDSKADI 187
Query: 217 WSTACITYQMVTGE 230
WS ++ GE
Sbjct: 188 WSLGITAIELARGE 201
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 56/134 (41%), Gaps = 16/134 (11%)
Query: 99 IVFE-LAGQTLSEFKSINYLNMNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTS 157
I+ E L G + + L+ + I R+ILKGL YLH +H D+K N+L+ S
Sbjct: 102 IIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKK-IHRDIKAANVLL--S 158
Query: 158 ETLGQKLA-LEVYEVLNTTNIADLGYAYKNNAFEFDYIQAREFRAAEVVLGGKLGKPVDI 216
E KLA V L T I K N F + + A EV+ DI
Sbjct: 159 EHGEVKLADFGVAGQLTDTQI-------KRNTF----VGTPFWMAPEVIKQSAYDSKADI 207
Query: 217 WSTACITYQMVTGE 230
WS ++ GE
Sbjct: 208 WSLGITAIELARGE 221
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 56/134 (41%), Gaps = 16/134 (11%)
Query: 99 IVFE-LAGQTLSEFKSINYLNMNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTS 157
I+ E L G + + L+ + I R+ILKGL YLH +H D+K N+L+ S
Sbjct: 97 IIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKK-IHRDIKAANVLL--S 153
Query: 158 ETLGQKLA-LEVYEVLNTTNIADLGYAYKNNAFEFDYIQAREFRAAEVVLGGKLGKPVDI 216
E KLA V L T I K N F + + A EV+ DI
Sbjct: 154 EHGEVKLADFGVAGQLTDTQI-------KRNXF----VGTPFWMAPEVIKQSAYDSKADI 202
Query: 217 WSTACITYQMVTGE 230
WS ++ GE
Sbjct: 203 WSLGITAIELARGE 216
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 73/193 (37%), Gaps = 30/193 (15%)
Query: 105 GQTLSEFKSINYLNMNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQ-- 162
GQT+ E + + I+ I+K L +LH ++H D+K N+L+ LGQ
Sbjct: 147 GQTIPE---------DILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLI---NALGQVK 194
Query: 163 --KLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQAREFRAAEVVLGGKLGKPVDIWSTA 220
+ Y V + D G Y+ A E E+ G K DIWS
Sbjct: 195 MCDFGISGYLVDSVAKTIDAGCK--------PYM-APERINPELNQKGYSVK-SDIWSLG 244
Query: 221 CITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDKVCNQSRLKAEFYDEDGKLLSNNVE 280
++ + +D FQ ++++ E P + AEF D + L N +
Sbjct: 245 ITMIELAILRFPYDSWGTPFQQLKQVVE----EPSPQLPADKFSAEFVDFTSQCLKKNSK 300
Query: 281 QISLTHHLQERGF 293
+ L + F
Sbjct: 301 ERPTYPELMQHPF 313
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 87/223 (39%), Gaps = 29/223 (13%)
Query: 99 IVFE-LAGQTLSEFKSINYLNMNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTS 157
I+ E L G + + L + I R+ILKGL YLH +H D+K N+L+ S
Sbjct: 94 IIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERK-IHRDIKAANVLL--S 150
Query: 158 ETLGQKLA-LEVYEVLNTTNIADLGYAYKNNAFEFDYIQAREFRAAEVVLGGKLGKPVDI 216
E KLA V L T I K N F + + A EV+ DI
Sbjct: 151 EQGDVKLADFGVAGQLTDTQI-------KRNXF----VGTPFWMAPEVIKQSAYDFKADI 199
Query: 217 WSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDKVCNQ-SRLKAEFYD----ED 271
WS ++ GE P +D + + I + P + Q S+ EF + +D
Sbjct: 200 WSLGITAIELAKGE----PPNSDLHPMRVLFLIPKNSPPTLEGQHSKPFKEFVEACLNKD 255
Query: 272 GKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSMLHWDSD 314
+ E L H R K+ LT +LI W S+
Sbjct: 256 PRFRPTAKEL--LKHKFITRYTKKTSFLT--ELIDRYKRWKSE 294
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 25/128 (19%)
Query: 124 DISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA 183
DI+RQ +G+ YLH ++H DLK +NI ++E L T I D G A
Sbjct: 108 DIARQTAQGMDYLH-AKSIIHRDLKSNNIF--------------LHEDL-TVKIGDFGLA 151
Query: 184 YKNNAF----EFDYIQAREFRAAEVVLGGKLGKPV----DIWSTACITYQMVTGEYLFDP 235
+ + + +F+ + A V+ + P D+++ + Y+++TG+ +
Sbjct: 152 TEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS- 210
Query: 236 NLNDFQHI 243
N+N+ I
Sbjct: 211 NINNRDQI 218
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 35.4 bits (80), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 56/134 (41%), Gaps = 16/134 (11%)
Query: 99 IVFE-LAGQTLSEFKSINYLNMNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTS 157
I+ E L G + + L+ + I R+ILKGL YLH +H D+K N+L+ S
Sbjct: 82 IIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKK-IHRDIKAANVLL--S 138
Query: 158 ETLGQKLA-LEVYEVLNTTNIADLGYAYKNNAFEFDYIQAREFRAAEVVLGGKLGKPVDI 216
E KLA V L T I K N F + + A EV+ DI
Sbjct: 139 EHGEVKLADFGVAGQLTDTQI-------KRNXF----VGTPFWMAPEVIKQSAYDSKADI 187
Query: 217 WSTACITYQMVTGE 230
WS ++ GE
Sbjct: 188 WSLGITAIELARGE 201
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 35.4 bits (80), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 105/243 (43%), Gaps = 49/243 (20%)
Query: 5 YCALDIGDTLISTYFIIRKLGWGFSSTVWLC-WNIETSSYVAVKVMK---GAPKFLHITR 60
Y ++ + ++ST ++G G TV+ W+ + VAVK++K P+ R
Sbjct: 30 YWEIEASEVMLST-----RIGSGSFGTVYKGKWHGD----VAVKILKVVDPTPEQFQAFR 80
Query: 61 NEVQLLKITISNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSIN--YLN 118
NEV +L+ T +++ F+ + T DN A + G +L + +
Sbjct: 81 NEVAVLRKT------RHVNILLFMGYMT--KDN--LAIVTQWCEGSSLYKHLHVQETKFQ 130
Query: 119 MNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIA 178
M + DI+RQ +G+ YLH +++H D+K +NI ++E L T I
Sbjct: 131 MFQLIDIARQTAQGMDYLH-AKNIIHRDMKSNNIF--------------LHEGL-TVKIG 174
Query: 179 DLGYAYKNNAF----EFDYIQAREFRAAEVVLGGKLGKPV----DIWSTACITYQMVTGE 230
D G A + + + + A V+ + P D++S + Y+++TGE
Sbjct: 175 DFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGE 234
Query: 231 YLF 233
+
Sbjct: 235 LPY 237
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 35.4 bits (80), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 84/206 (40%), Gaps = 34/206 (16%)
Query: 46 VKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAG 105
V V + P+ EVQLL+ E+ N V+++ F D I EL
Sbjct: 51 VAVKRILPECFSFADREVQLLR----ESDEHPN-VIRY---FCTEKDRQFQY-IAIELCA 101
Query: 106 QTLSEF---KSINYLNMNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQ 162
TL E+ K +L + + + +Q GL +LH + ++VH DLK NIL+ G+
Sbjct: 102 ATLQEYVEQKDFAHLGLEPIT-LLQQTTSGLAHLHSL-NIVHRDLKPHNILISMPNAHGK 159
Query: 163 KLALEVYEVLNTTNIADLGYAYKNNAFEFDYIQAREFRAAEVVLGGKL------GKP--- 213
A+ I+D G K + + E + ++ P
Sbjct: 160 IKAM----------ISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYT 209
Query: 214 VDIWSTACITYQMVT-GEYLFDPNLN 238
VDI+S C+ Y +++ G + F +L
Sbjct: 210 VDIFSAGCVFYYVISEGSHPFGKSLQ 235
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 35.0 bits (79), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 78/172 (45%), Gaps = 37/172 (21%)
Query: 22 RKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVV 81
RK+G G ++L NI+T+ VA+K+ ++ QLL Y++ +
Sbjct: 13 RKIGSGSFGEIYLGTNIQTNEEVAIKLE-------NVKTKHPQLL---------YESKIY 56
Query: 82 KFLDHFTVL------GDNGVHACIVFELAGQTLSEFKSI--NYLNMNCMKDISRQILKGL 133
+ L T + G G + +V +L G +L + + L++ + ++ Q++ +
Sbjct: 57 RILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRV 116
Query: 134 YYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK 185
++H +H D+K DN L+ LG++ A +VY I D G A K
Sbjct: 117 EFVHSKS-FLHRDIKPDNFLM----GLGRR-ANQVY-------IIDFGLAKK 155
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 35.0 bits (79), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 104/282 (36%), Gaps = 35/282 (12%)
Query: 20 IIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNH-HEYQN 78
++ KLG G +V+ + ET VA+K + I + E+ +++ S H +Y
Sbjct: 33 VLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIK-EISIMQQCDSPHVVKYYG 91
Query: 79 HVVKFLDHFTVLGDNGVHACI-VFELAGQTLSEFKSINYLNMNCMKDISRQILKGLYYLH 137
K D + V+ G + + L +TL+E + + I + LKGL YLH
Sbjct: 92 SYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTE---------DEIATILQSTLKGLEYLH 142
Query: 138 EVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK---NNAFEFDYI 194
+H D+K NIL+ T +AD G A + A I
Sbjct: 143 -FMRKIHRDIKAGNILLNTE---------------GHAKLADFGVAGQLTDXMAKRNXVI 186
Query: 195 QAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIP 254
+ A EV+ DIWS +M G+ P D + + I + P
Sbjct: 187 GTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK----PPYADIHPMRAIFMIPTNPP 242
Query: 255 DKVCNQSRLKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKS 296
F D + L + EQ + L + F +S
Sbjct: 243 PTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRS 284
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 35.0 bits (79), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 68/155 (43%), Gaps = 15/155 (9%)
Query: 7 ALDIGDTLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLL 66
A+ + + + + K+G G +V+ C A+K K K L + +E L
Sbjct: 2 AMGMKSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSK---KPLAGSVDEQNAL 58
Query: 67 KITISNHHEYQ-NHVVKFL------DHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNM 119
+ ++ Q +HVV++ DH + + C LA ++ ++Y
Sbjct: 59 REVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEY----CNGGSLADAISENYRIMSYFKE 114
Query: 120 NCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILV 154
+KD+ Q+ +GL Y+H + LVH D+K NI +
Sbjct: 115 AELKDLLLQVGRGLRYIHSMS-LVHMDIKPSNIFI 148
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 35.0 bits (79), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 59/141 (41%), Gaps = 22/141 (15%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNN 187
QI+ GL +LH+ ++++ DLK +N+L+ I+DLG A +
Sbjct: 297 QIVSGLEHLHQR-NIIYRDLKPENVLLDDD---------------GNVRISDLGLAVELK 340
Query: 188 AFEFD---YIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIE 244
A + Y F A E++LG + VD ++ Y+M+ F ++ E
Sbjct: 341 AGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE 400
Query: 245 ---RMTEILGDIPDKVCNQSR 262
R+ E PDK S+
Sbjct: 401 LKQRVLEQAVTYPDKFSPASK 421
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 35.0 bits (79), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 59/141 (41%), Gaps = 22/141 (15%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNN 187
QI+ GL +LH+ ++++ DLK +N+L+ I+DLG A +
Sbjct: 297 QIVSGLEHLHQR-NIIYRDLKPENVLLDDD---------------GNVRISDLGLAVELK 340
Query: 188 AFEFD---YIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIE 244
A + Y F A E++LG + VD ++ Y+M+ F ++ E
Sbjct: 341 AGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE 400
Query: 245 ---RMTEILGDIPDKVCNQSR 262
R+ E PDK S+
Sbjct: 401 LKQRVLEQAVTYPDKFSPASK 421
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 34.7 bits (78), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 59/141 (41%), Gaps = 22/141 (15%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNN 187
QI+ GL +LH+ ++++ DLK +N+L+ I+DLG A +
Sbjct: 297 QIVSGLEHLHQR-NIIYRDLKPENVLLDDD---------------GNVRISDLGLAVELK 340
Query: 188 AFEFD---YIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIE 244
A + Y F A E++LG + VD ++ Y+M+ F ++ E
Sbjct: 341 AGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE 400
Query: 245 ---RMTEILGDIPDKVCNQSR 262
R+ E PDK S+
Sbjct: 401 LKQRVLEQAVTYPDKFSPASK 421
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 34.7 bits (78), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 21/121 (17%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKN- 186
+I GL++L +++ DLK DN++ L SE IAD G +N
Sbjct: 450 EIAIGLFFLQSK-GIIYRDLKLDNVM-LDSE--------------GHIKIADFGMCKENI 493
Query: 187 --NAFEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLND--FQH 242
+ ++ A E++ GK VD W+ + Y+M+ G+ F+ D FQ
Sbjct: 494 WDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQS 553
Query: 243 I 243
I
Sbjct: 554 I 554
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 34.7 bits (78), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 59/141 (41%), Gaps = 22/141 (15%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNN 187
QI+ GL +LH+ ++++ DLK +N+L+ I+DLG A +
Sbjct: 297 QIVSGLEHLHQR-NIIYRDLKPENVLLDDD---------------GNVRISDLGLAVELK 340
Query: 188 AFEFD---YIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIE 244
A + Y F A E++LG + VD ++ Y+M+ F ++ E
Sbjct: 341 AGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE 400
Query: 245 ---RMTEILGDIPDKVCNQSR 262
R+ E PDK S+
Sbjct: 401 LKQRVLEQAVTYPDKFSPASK 421
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 34.7 bits (78), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 78 NHVVKFL------DHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILK 131
+HVV++ DH + + C LA ++ ++Y +KD+ Q+ +
Sbjct: 67 SHVVRYFSAWAEDDHMLIQNE----YCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 122
Query: 132 GLYYLHEVCDLVHTDLKHDNILV 154
GL Y+H + LVH D+K NI +
Sbjct: 123 GLRYIHSMS-LVHMDIKPSNIFI 144
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 34.7 bits (78), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 78 NHVVKFL------DHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILK 131
+HVV++ DH + + C LA ++ ++Y +KD+ Q+ +
Sbjct: 69 SHVVRYFSAWAEDDHMLIQNEY----CNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 124
Query: 132 GLYYLHEVCDLVHTDLKHDNILV 154
GL Y+H + LVH D+K NI +
Sbjct: 125 GLRYIHSMS-LVHMDIKPSNIFI 146
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 34.7 bits (78), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 11/83 (13%)
Query: 78 NHVVKFL------DHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILK 131
+HVV++ DH + + C LA ++ ++Y +KD+ Q+ +
Sbjct: 69 SHVVRYFSAWAEDDHMLIQNEY----CNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 124
Query: 132 GLYYLHEVCDLVHTDLKHDNILV 154
GL Y+H + LVH D+K NI +
Sbjct: 125 GLRYIHSMS-LVHMDIKPSNIFI 146
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 34.7 bits (78), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 25/128 (19%)
Query: 124 DISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA 183
DI+RQ +G+ YLH ++H DLK +NI ++E L T I D G A
Sbjct: 135 DIARQTAQGMDYLH-AKSIIHRDLKSNNIF--------------LHEDL-TVKIGDFGLA 178
Query: 184 YKNNAF----EFDYIQAREFRAAEVVLGGKLGKP----VDIWSTACITYQMVTGEYLFDP 235
+ + +F+ + A V+ + P D+++ + Y+++TG+ +
Sbjct: 179 TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS- 237
Query: 236 NLNDFQHI 243
N+N+ I
Sbjct: 238 NINNRDQI 245
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 34.7 bits (78), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 45/105 (42%), Gaps = 15/105 (14%)
Query: 127 RQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLA-LEVYEVLNTTNIADLGYAYK 185
++ILKGL YLH +H D+K N+L+ SE KLA V L T I K
Sbjct: 127 KEILKGLDYLHSEKK-IHRDIKAANVLL--SEQGDVKLADFGVAGQLTDTQI-------K 176
Query: 186 NNAFEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGE 230
N F + + A EV+ DIWS ++ GE
Sbjct: 177 RNTF----VGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGE 217
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 34.7 bits (78), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 25/128 (19%)
Query: 124 DISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA 183
DI+RQ +G+ YLH ++H DLK +NI ++E L T I D G A
Sbjct: 136 DIARQTAQGMDYLH-AKSIIHRDLKSNNIF--------------LHEDL-TVKIGDFGLA 179
Query: 184 YKNNAF----EFDYIQAREFRAAEVVLGGKLGKP----VDIWSTACITYQMVTGEYLFDP 235
+ + +F+ + A V+ + P D+++ + Y+++TG+ +
Sbjct: 180 TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS- 238
Query: 236 NLNDFQHI 243
N+N+ I
Sbjct: 239 NINNRDQI 246
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 34.7 bits (78), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 91/230 (39%), Gaps = 40/230 (17%)
Query: 13 TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISN 72
T+ + RKLG G V L +E S +V+K K R++V + +I
Sbjct: 19 TIDDLFIFKRKLGSGAFGDVHL---VEERSSGLERVIKTINK----DRSQVPMEQI---- 67
Query: 73 HHEYQNHVVKFLDH------FTVLGDNG-----VHACIVFELAGQTLSEFKSINYLNMNC 121
E + V+K LDH F V D + C EL + +S L+
Sbjct: 68 --EAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGY 125
Query: 122 MKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLG 181
+ ++ +Q++ L Y H +VH DLK +NIL + + I D G
Sbjct: 126 VAELMKQMMNALAYFHSQ-HVVHKDLKPENILFQDTSPH------------SPIKIIDFG 172
Query: 182 YA--YKNNAFEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTG 229
A +K++ + + A EV K DIWS + Y ++TG
Sbjct: 173 LAELFKSDEHSTNAAGTALYMAPEVFKRDVTFK-CDIWSAGVVMYFLLTG 221
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 34.7 bits (78), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 53/123 (43%), Gaps = 21/123 (17%)
Query: 126 SRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK 185
+ +I GL++L +++ DLK DN++ L SE IAD G +
Sbjct: 127 AAEIAIGLFFLQSK-GIIYRDLKLDNVM-LDSE--------------GHIKIADFGMCKE 170
Query: 186 N---NAFEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLND--F 240
N + ++ A E++ GK VD W+ + Y+M+ G+ F+ D F
Sbjct: 171 NIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELF 230
Query: 241 QHI 243
Q I
Sbjct: 231 QSI 233
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 34.7 bits (78), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 25/128 (19%)
Query: 124 DISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA 183
DI+RQ +G+ YLH ++H DLK +NI ++E L T I D G A
Sbjct: 113 DIARQTAQGMDYLH-AKSIIHRDLKSNNIF--------------LHEDL-TVKIGDFGLA 156
Query: 184 YKNNAF----EFDYIQAREFRAAEVVLGGKLGKP----VDIWSTACITYQMVTGEYLFDP 235
+ + +F+ + A V+ + P D+++ + Y+++TG+ +
Sbjct: 157 TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS- 215
Query: 236 NLNDFQHI 243
N+N+ I
Sbjct: 216 NINNRDQI 223
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 34.7 bits (78), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 25/128 (19%)
Query: 124 DISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA 183
DI+RQ +G+ YLH ++H DLK +NI ++E L T I D G A
Sbjct: 110 DIARQTAQGMDYLH-AKSIIHRDLKSNNIF--------------LHEDL-TVKIGDFGLA 153
Query: 184 YKNNAF----EFDYIQAREFRAAEVVLGGKLGKP----VDIWSTACITYQMVTGEYLFDP 235
+ + +F+ + A V+ + P D+++ + Y+++TG+ +
Sbjct: 154 TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS- 212
Query: 236 NLNDFQHI 243
N+N+ I
Sbjct: 213 NINNRDQI 220
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 34.3 bits (77), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 25/128 (19%)
Query: 124 DISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA 183
DI+RQ +G+ YLH ++H DLK +NI ++E L T I D G A
Sbjct: 113 DIARQTAQGMDYLH-AKSIIHRDLKSNNIF--------------LHEDL-TVKIGDFGLA 156
Query: 184 YKNNAF----EFDYIQAREFRAAEVVLGGKLGKP----VDIWSTACITYQMVTGEYLFDP 235
+ + +F+ + A V+ + P D+++ + Y+++TG+ +
Sbjct: 157 TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS- 215
Query: 236 NLNDFQHI 243
N+N+ I
Sbjct: 216 NINNRDQI 223
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 34.3 bits (77), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 80/188 (42%), Gaps = 30/188 (15%)
Query: 16 STYFIIRKLGWGFSSTVWLCWNIETSSYVAVKV--MKGAPKFLHITRNEVQLLKITISNH 73
+ Y + RK+G G ++L NI + VA+K+ +K LHI ++++ +
Sbjct: 9 NKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIESKFYKMMQGGVG-- 66
Query: 74 HEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSI--NYLNMNCMKDISRQILK 131
+ G G + +V EL G +L + + ++ + ++ Q++
Sbjct: 67 ----------IPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMIS 116
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK-NNAFE 190
+ Y+H + +H D+K DN L+ LG+K N I D G A K +A
Sbjct: 117 RIEYIHSK-NFIHRDVKPDNFLM----GLGKK--------GNLVYIIDFGLAKKYRDART 163
Query: 191 FDYIQARE 198
+I RE
Sbjct: 164 HQHIPYRE 171
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 34.3 bits (77), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 25/128 (19%)
Query: 124 DISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA 183
DI+RQ +G+ YLH ++H DLK +NI ++E L T I D G A
Sbjct: 108 DIARQTAQGMDYLH-AKSIIHRDLKSNNIF--------------LHEDL-TVKIGDFGLA 151
Query: 184 YKNNAF----EFDYIQAREFRAAEVVLGGKLGKPV----DIWSTACITYQMVTGEYLFDP 235
+ + +F+ + A V+ + P D+++ + Y+++TG+ +
Sbjct: 152 TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS- 210
Query: 236 NLNDFQHI 243
N+N+ I
Sbjct: 211 NINNRDQI 218
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 34.3 bits (77), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 58/128 (45%), Gaps = 25/128 (19%)
Query: 124 DISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA 183
DI+RQ +G+ YLH ++H DLK +NI ++E L T I D G A
Sbjct: 108 DIARQTAQGMDYLH-AKSIIHRDLKSNNIF--------------LHEDL-TVKIGDFGLA 151
Query: 184 YKNNAF----EFDYIQAREFRAAEVVLGGKLGKP----VDIWSTACITYQMVTGEYLFDP 235
+ + +F+ + A V+ + P D+++ + Y+++TG+ +
Sbjct: 152 TVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYS- 210
Query: 236 NLNDFQHI 243
N+N+ I
Sbjct: 211 NINNRDQI 218
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 34.3 bits (77), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 58/139 (41%), Gaps = 31/139 (22%)
Query: 131 KGLYYLHEVC---------DLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLG 181
+ ++Y E+C +V+ DLK +NIL+ + I+DLG
Sbjct: 287 RAVFYAAEICCGLEDLHRERIVYRDLKPENILL---------------DDHGHIRISDLG 331
Query: 182 YAYKNNAFEFDYIQAR----EFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNL 237
A + E I+ R + A EVV + D W+ C+ Y+M+ G+ F
Sbjct: 332 LAV--HVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK 389
Query: 238 NDFQHIERMTEILGDIPDK 256
+ E + ++ ++P++
Sbjct: 390 KKIKR-EEVERLVKEVPEE 407
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 58/139 (41%), Gaps = 31/139 (22%)
Query: 131 KGLYYLHEVC---------DLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLG 181
+ ++Y E+C +V+ DLK +NIL+ + I+DLG
Sbjct: 287 RAVFYAAEICCGLEDLHRERIVYRDLKPENILL---------------DDHGHIRISDLG 331
Query: 182 YAYKNNAFEFDYIQAR----EFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNL 237
A + E I+ R + A EVV + D W+ C+ Y+M+ G+ F
Sbjct: 332 LAV--HVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK 389
Query: 238 NDFQHIERMTEILGDIPDK 256
+ E + ++ ++P++
Sbjct: 390 KKIKR-EEVERLVKEVPEE 407
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 132/329 (40%), Gaps = 75/329 (22%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVA------------------VKVMKGAPKFLHIT 59
Y ++RKLG G S V+ NI + VA ++ ++G P + +
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVAVKILKPVKKKKIKREIKILENLRGGPNIITLA 98
Query: 60 RNEVQLLKITISNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSI-NYLN 118
++K +S +VFE T +FK + L
Sbjct: 99 ----DIVKDPVSR-----------------------TPALVFEHVNNT--DFKQLYQTLT 129
Query: 119 MNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIA 178
++ +ILK L Y H + ++H D+K N+L+ + +KL L
Sbjct: 130 DYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVLI---DHEHRKLRL-----------I 174
Query: 179 DLGYA-YKNNAFEFD-YIQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFDP 235
D G A + + E++ + +R F+ E+++ ++ +D+WS C+ M+ + F
Sbjct: 175 DWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 234
Query: 236 NLNDFQHIERMTEILG--DIPDKVCNQS-RLKAEFYDEDGKLLSNNVEQISLTHHLQERG 292
+++ + R+ ++LG D+ D + + L F D G+ E+ H + +
Sbjct: 235 GHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFV---HSENQH 291
Query: 293 FSKSESLTFSDLILSMLHWDSDERFTAAQ 321
E+L F D +L +D R TA +
Sbjct: 292 LVSPEALDFLD---KLLRYDHQSRLTARE 317
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 65/154 (42%), Gaps = 17/154 (11%)
Query: 13 TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKV--MKGAPKFLHITRNEVQLLKITI 70
++ + + +K+G G + L N+ T+ YVA+K+ +K LH+ + L T
Sbjct: 1 SMGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLSATE 60
Query: 71 SNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSI--NYLNMNCMKDISRQ 128
Y G G + +V EL G +L + + + + I+ Q
Sbjct: 61 GVPQVY------------YFGPXGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQ 108
Query: 129 ILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQ 162
++ + Y+H L++ D+K +N LV T Q
Sbjct: 109 LITRMEYVH-TKSLIYRDVKPENFLVGRPGTKRQ 141
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 44/110 (40%), Gaps = 19/110 (17%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK-- 185
QI+ G+ YLH ++H DL N+L+ + + IAD G A +
Sbjct: 120 QIITGMLYLHS-HGILHRDLTLSNLLLTRNMNI---------------KIADFGLATQLK 163
Query: 186 -NNAFEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFD 234
+ + + + E+ G D+WS C+ Y ++ G FD
Sbjct: 164 MPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 16/109 (14%)
Query: 128 QILKGLYYLHEVCD--LVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK 185
Q +G+ YLH + L+H DLK N+L++ T+ I D G A
Sbjct: 111 QCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTV--------------LKICDFGTACD 156
Query: 186 NNAFEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFD 234
+ + + A EV G + D++S I ++++T FD
Sbjct: 157 IQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD 205
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 16/109 (14%)
Query: 128 QILKGLYYLHEVCD--LVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK 185
Q +G+ YLH + L+H DLK N+L++ T+ I D G A
Sbjct: 110 QCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTV--------------LKICDFGTACD 155
Query: 186 NNAFEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFD 234
+ + + A EV G + D++S I ++++T FD
Sbjct: 156 IQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFD 204
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 16/137 (11%)
Query: 22 RKLGWGFSSTVWLCWNIETSSYVAVKV--MKGAPKFLHITRNEVQLLKITISNHHEYQNH 79
+K+G G + L N+ T+ YVA+K+ +K LH+ E + K + + E
Sbjct: 6 KKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHL---EYRFYK-QLGSAGEGLPQ 61
Query: 80 VVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSI--NYLNMNCMKDISRQILKGLYYLH 137
V F G G + +V EL G +L + + + + I+ Q+L + Y+H
Sbjct: 62 VYYF-------GPXGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLMIAIQLLSRMEYVH 114
Query: 138 EVCDLVHTDLKHDNILV 154
+L++ D+K +N L+
Sbjct: 115 SK-NLIYRDVKPENFLI 130
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 21/110 (19%)
Query: 131 KGLYYLHEVCD--LVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA----Y 184
+GL YLH+ CD ++H D+K NIL+ E +E + + D G A Y
Sbjct: 150 RGLAYLHDHCDPKIIHRDVKAANILLD-----------EEFEAV----VGDFGLAKLMDY 194
Query: 185 KNNAFEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFD 234
K+ A E + GK + D++ + +++TG+ FD
Sbjct: 195 KDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 244
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 62/152 (40%), Gaps = 13/152 (8%)
Query: 13 TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISN 72
L Y + + LG G V L + +T VA+K++ + R L +
Sbjct: 13 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNV---- 68
Query: 73 HHEYQNHVVKFLDHFTVLGDNGVHAC----IVFEL--AGQTLSEFKSINYLNMNCMKDIS 126
E + ++K L+H ++ IV EL G+ + L K
Sbjct: 69 --ETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF 126
Query: 127 RQILKGLYYLHEVCDLVHTDLKHDNILVLTSE 158
Q+L + YLHE ++H DLK +N+L+ + E
Sbjct: 127 YQMLLAVQYLHE-NGIIHRDLKPENVLLSSQE 157
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 62/152 (40%), Gaps = 13/152 (8%)
Query: 13 TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISN 72
L Y + + LG G V L + +T VA+K++ + R L +
Sbjct: 6 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNV---- 61
Query: 73 HHEYQNHVVKFLDHFTVLGDNGVHAC----IVFEL--AGQTLSEFKSINYLNMNCMKDIS 126
E + ++K L+H ++ IV EL G+ + L K
Sbjct: 62 --ETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF 119
Query: 127 RQILKGLYYLHEVCDLVHTDLKHDNILVLTSE 158
Q+L + YLHE ++H DLK +N+L+ + E
Sbjct: 120 YQMLLAVQYLHE-NGIIHRDLKPENVLLSSQE 150
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 62/152 (40%), Gaps = 13/152 (8%)
Query: 13 TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISN 72
L Y + + LG G V L + +T VA+K++ + R L +
Sbjct: 7 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNV---- 62
Query: 73 HHEYQNHVVKFLDHFTVLGDNGVHAC----IVFEL--AGQTLSEFKSINYLNMNCMKDIS 126
E + ++K L+H ++ IV EL G+ + L K
Sbjct: 63 --ETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF 120
Query: 127 RQILKGLYYLHEVCDLVHTDLKHDNILVLTSE 158
Q+L + YLHE ++H DLK +N+L+ + E
Sbjct: 121 YQMLLAVQYLHE-NGIIHRDLKPENVLLSSQE 151
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 61/147 (41%), Gaps = 13/147 (8%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQ 77
Y + + LG G V L + +T VA+K++ + R L + E +
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNV------ETE 65
Query: 78 NHVVKFLDHFTVLGDNGVHAC----IVFEL--AGQTLSEFKSINYLNMNCMKDISRQILK 131
++K L+H ++ IV EL G+ + L K Q+L
Sbjct: 66 IEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSE 158
+ YLHE ++H DLK +N+L+ + E
Sbjct: 126 AVQYLHE-NGIIHRDLKPENVLLSSQE 151
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 62/152 (40%), Gaps = 13/152 (8%)
Query: 13 TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISN 72
L Y + + LG G V L + +T VA+K++ + R L +
Sbjct: 7 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNV---- 62
Query: 73 HHEYQNHVVKFLDHFTVLGDNGVHAC----IVFEL--AGQTLSEFKSINYLNMNCMKDIS 126
E + ++K L+H ++ IV EL G+ + L K
Sbjct: 63 --ETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF 120
Query: 127 RQILKGLYYLHEVCDLVHTDLKHDNILVLTSE 158
Q+L + YLHE ++H DLK +N+L+ + E
Sbjct: 121 YQMLLAVQYLHE-NGIIHRDLKPENVLLSSQE 151
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 38/101 (37%), Gaps = 26/101 (25%)
Query: 143 VHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNN----------AFEFD 192
VH D+K DN+L+ +V +AD G K N D
Sbjct: 213 VHRDIKPDNVLL---------------DVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPD 257
Query: 193 YIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLF 233
YI +A E +G K G D WS Y+M+ GE F
Sbjct: 258 YISPEILQAMEDGMG-KYGPECDWWSLGVCMYEMLYGETPF 297
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 13/106 (12%)
Query: 131 KGLYYLHEVCD--LVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNA 188
+GL YLH+ CD ++H D+K NIL L E V+ +A L YK+
Sbjct: 142 RGLAYLHDHCDPKIIHRDVKAANIL----------LDEEFEAVVGDFGLAKL-MDYKDXH 190
Query: 189 FEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFD 234
A E + GK + D++ + +++TG+ FD
Sbjct: 191 VXXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 236
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 109/253 (43%), Gaps = 29/253 (11%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVA--VKVMKGAPKFLHITRNEVQLLKITISNHHE 75
Y I++++G G SS V+ N + Y V + + + L RNE+ L + +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYL----NKLQQ 113
Query: 76 YQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEF-KSINYLNMNCMKDISRQILKGLY 134
+ + +++ D+ + D ++ +V E L+ + K ++ K + +L+ ++
Sbjct: 114 HSDKIIRLYDY--EITDQYIY--MVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVH 169
Query: 135 YLHEVCDLVHTDLKHDNILV------LTSETLGQKLALEVYEVLNTTNIADLGYAYKNNA 188
+H+ +VH+DLK N L+ L + ++ + V+ + + + Y A
Sbjct: 170 TIHQ-HGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYM-PPEA 227
Query: 189 FEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTE 248
+ D +RE ++ + K D+WS CI Y M G+ F +N + + +
Sbjct: 228 IK-DMSSSRENGKSKSKISPK----SDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID 282
Query: 249 I-----LGDIPDK 256
DIP+K
Sbjct: 283 PNHEIEFPDIPEK 295
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 32.7 bits (73), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 68/150 (45%), Gaps = 18/150 (12%)
Query: 10 IGDTLISTYFII-RKLGWGFSSTVWLCWNIETSSYVAVKV--MKGAPKFLHITRNEVQLL 66
+G ++ F + +K+G G + L N+ T+ YVA+K+ MK LH+ E +
Sbjct: 23 MGVLMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHL---EYRFY 79
Query: 67 KITISNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSI--NYLNMNCMKD 124
K S + G G + +V EL G +L + + ++ +
Sbjct: 80 KQLGSGDG---------IPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLM 130
Query: 125 ISRQILKGLYYLHEVCDLVHTDLKHDNILV 154
I+ Q++ + Y+H +L++ D+K +N L+
Sbjct: 131 IAIQLISRMEYVHSK-NLIYRDVKPENFLI 159
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 32.7 bits (73), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 64/143 (44%), Gaps = 17/143 (11%)
Query: 16 STYFIIRKLGWGFSSTVWLCWNIETSSYVAVKV--MKGAPKFLHITRNEVQLLKITISNH 73
+ + +K+G G + L N+ T+ YVA+K+ MK LH+ E + K S
Sbjct: 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHL---EYRFYKQLGSGD 65
Query: 74 HEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSI--NYLNMNCMKDISRQILK 131
+ G G + +V EL G +L + + ++ + I+ Q++
Sbjct: 66 G---------IPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLIS 116
Query: 132 GLYYLHEVCDLVHTDLKHDNILV 154
+ Y+H +L++ D+K +N L+
Sbjct: 117 RMEYVHSK-NLIYRDVKPENFLI 138
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 32.7 bits (73), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 68/150 (45%), Gaps = 18/150 (12%)
Query: 10 IGDTLISTYFII-RKLGWGFSSTVWLCWNIETSSYVAVKV--MKGAPKFLHITRNEVQLL 66
+G ++ F + +K+G G + L N+ T+ YVA+K+ MK LH+ E +
Sbjct: 2 MGVLMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHL---EYRFY 58
Query: 67 KITISNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSI--NYLNMNCMKD 124
K S + G G + +V EL G +L + + ++ +
Sbjct: 59 KQLGSGDG---------IPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLM 109
Query: 125 ISRQILKGLYYLHEVCDLVHTDLKHDNILV 154
I+ Q++ + Y+H +L++ D+K +N L+
Sbjct: 110 IAIQLISRMEYVHSK-NLIYRDVKPENFLI 138
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 32.7 bits (73), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 38/101 (37%), Gaps = 26/101 (25%)
Query: 143 VHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNN----------AFEFD 192
VH D+K DN+L+ +V +AD G K N D
Sbjct: 197 VHRDIKPDNVLL---------------DVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPD 241
Query: 193 YIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLF 233
YI +A E +G K G D WS Y+M+ GE F
Sbjct: 242 YISPEILQAMEDGMG-KYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 32.7 bits (73), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 109/253 (43%), Gaps = 29/253 (11%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVA--VKVMKGAPKFLHITRNEVQLLKITISNHHE 75
Y I++++G G SS V+ N + Y V + + + L RNE+ L + +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYL----NKLQQ 113
Query: 76 YQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEF-KSINYLNMNCMKDISRQILKGLY 134
+ + +++ D+ + D ++ +V E L+ + K ++ K + +L+ ++
Sbjct: 114 HSDKIIRLYDY--EITDQYIY--MVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVH 169
Query: 135 YLHEVCDLVHTDLKHDNILV------LTSETLGQKLALEVYEVLNTTNIADLGYAYKNNA 188
+H+ +VH+DLK N L+ L + ++ + V+ + + + Y A
Sbjct: 170 TIHQ-HGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYM-PPEA 227
Query: 189 FEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTE 248
+ D +RE ++ + K D+WS CI Y M G+ F +N + + +
Sbjct: 228 IK-DMSSSRENGKSKSKISPK----SDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID 282
Query: 249 I-----LGDIPDK 256
DIP+K
Sbjct: 283 PNHEIEFPDIPEK 295
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 109/253 (43%), Gaps = 29/253 (11%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVA--VKVMKGAPKFLHITRNEVQLLKITISNHHE 75
Y I++++G G SS V+ N + Y V + + + L RNE+ L + +
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYL----NKLQQ 85
Query: 76 YQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEF-KSINYLNMNCMKDISRQILKGLY 134
+ + +++ D+ + D ++ +V E L+ + K ++ K + +L+ ++
Sbjct: 86 HSDKIIRLYDY--EITDQYIY--MVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVH 141
Query: 135 YLHEVCDLVHTDLKHDNILV------LTSETLGQKLALEVYEVLNTTNIADLGYAYKNNA 188
+H+ +VH+DLK N L+ L + ++ + V+ + + + Y A
Sbjct: 142 TIHQ-HGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYM-PPEA 199
Query: 189 FEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTE 248
+ D +RE ++ + K D+WS CI Y M G+ F +N + + +
Sbjct: 200 IK-DMSSSRENGKSKSKISPK----SDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID 254
Query: 249 I-----LGDIPDK 256
DIP+K
Sbjct: 255 PNHEIEFPDIPEK 267
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 109/253 (43%), Gaps = 29/253 (11%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVA--VKVMKGAPKFLHITRNEVQLLKITISNHHE 75
Y I++++G G SS V+ N + Y V + + + L RNE+ L + +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYL----NKLQQ 113
Query: 76 YQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEF-KSINYLNMNCMKDISRQILKGLY 134
+ + +++ D+ + D ++ +V E L+ + K ++ K + +L+ ++
Sbjct: 114 HSDKIIRLYDY--EITDQYIY--MVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVH 169
Query: 135 YLHEVCDLVHTDLKHDNILV------LTSETLGQKLALEVYEVLNTTNIADLGYAYKNNA 188
+H+ +VH+DLK N L+ L + ++ + V+ + + + Y A
Sbjct: 170 TIHQ-HGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYM-PPEA 227
Query: 189 FEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTE 248
+ D +RE ++ + K D+WS CI Y M G+ F +N + + +
Sbjct: 228 IK-DMSSSRENGKSKSKISPK----SDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID 282
Query: 249 I-----LGDIPDK 256
DIP+K
Sbjct: 283 PNHEIEFPDIPEK 295
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 109/253 (43%), Gaps = 29/253 (11%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVA--VKVMKGAPKFLHITRNEVQLLKITISNHHE 75
Y I++++G G SS V+ N + Y V + + + L RNE+ L + +
Sbjct: 10 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYL----NKLQQ 65
Query: 76 YQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEF-KSINYLNMNCMKDISRQILKGLY 134
+ + +++ D+ + D ++ +V E L+ + K ++ K + +L+ ++
Sbjct: 66 HSDKIIRLYDY--EITDQYIY--MVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVH 121
Query: 135 YLHEVCDLVHTDLKHDNILV------LTSETLGQKLALEVYEVLNTTNIADLGYAYKNNA 188
+H+ +VH+DLK N L+ L + ++ + V+ + + + Y A
Sbjct: 122 TIHQ-HGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYM-PPEA 179
Query: 189 FEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTE 248
+ D +RE ++ + K D+WS CI Y M G+ F +N + + +
Sbjct: 180 IK-DMSSSRENGKSKSKISPK----SDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID 234
Query: 249 I-----LGDIPDK 256
DIP+K
Sbjct: 235 PNHEIEFPDIPEK 247
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 32.3 bits (72), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 109/253 (43%), Gaps = 29/253 (11%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVA--VKVMKGAPKFLHITRNEVQLLKITISNHHE 75
Y I++++G G SS V+ N + Y V + + + L RNE+ L + +
Sbjct: 14 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYL----NKLQQ 69
Query: 76 YQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEF-KSINYLNMNCMKDISRQILKGLY 134
+ + +++ D+ + D ++ +V E L+ + K ++ K + +L+ ++
Sbjct: 70 HSDKIIRLYDY--EITDQYIY--MVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVH 125
Query: 135 YLHEVCDLVHTDLKHDNILV------LTSETLGQKLALEVYEVLNTTNIADLGYAYKNNA 188
+H+ +VH+DLK N L+ L + ++ + V+ + + + Y A
Sbjct: 126 TIHQ-HGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYM-PPEA 183
Query: 189 FEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTE 248
+ D +RE ++ + K D+WS CI Y M G+ F +N + + +
Sbjct: 184 IK-DMSSSRENGKSKSKISPK----SDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID 238
Query: 249 I-----LGDIPDK 256
DIP+K
Sbjct: 239 PNHEIEFPDIPEK 251
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 32.3 bits (72), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 109/253 (43%), Gaps = 29/253 (11%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVA--VKVMKGAPKFLHITRNEVQLLKITISNHHE 75
Y I++++G G SS V+ N + Y V + + + L RNE+ L + +
Sbjct: 11 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYL----NKLQQ 66
Query: 76 YQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEF-KSINYLNMNCMKDISRQILKGLY 134
+ + +++ D+ + D ++ +V E L+ + K ++ K + +L+ ++
Sbjct: 67 HSDKIIRLYDY--EITDQYIY--MVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVH 122
Query: 135 YLHEVCDLVHTDLKHDNILV------LTSETLGQKLALEVYEVLNTTNIADLGYAYKNNA 188
+H+ +VH+DLK N L+ L + ++ + V+ + + + Y A
Sbjct: 123 TIHQ-HGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYM-PPEA 180
Query: 189 FEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTE 248
+ D +RE ++ + K D+WS CI Y M G+ F +N + + +
Sbjct: 181 IK-DMSSSRENGKSKSKISPK----SDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID 235
Query: 249 I-----LGDIPDK 256
DIP+K
Sbjct: 236 PNHEIEFPDIPEK 248
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 109/253 (43%), Gaps = 29/253 (11%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVA--VKVMKGAPKFLHITRNEVQLLKITISNHHE 75
Y I++++G G SS V+ N + Y V + + + L RNE+ L + +
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYL----NKLQQ 85
Query: 76 YQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEF-KSINYLNMNCMKDISRQILKGLY 134
+ + +++ D+ + D ++ +V E L+ + K ++ K + +L+ ++
Sbjct: 86 HSDKIIRLYDY--EITDQYIY--MVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVH 141
Query: 135 YLHEVCDLVHTDLKHDNILV------LTSETLGQKLALEVYEVLNTTNIADLGYAYKNNA 188
+H+ +VH+DLK N L+ L + ++ + V+ + + + Y A
Sbjct: 142 TIHQ-HGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYM-PPEA 199
Query: 189 FEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTE 248
+ D +RE ++ + K D+WS CI Y M G+ F +N + + +
Sbjct: 200 IK-DMSSSRENGKSKSKISPK----SDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID 254
Query: 249 I-----LGDIPDK 256
DIP+K
Sbjct: 255 PNHEIEFPDIPEK 267
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 32.0 bits (71), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 83/225 (36%), Gaps = 26/225 (11%)
Query: 15 ISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHH 74
I + IR LG G V L ET AVKV+K K + + ++V+
Sbjct: 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLK---KDVILQDDDVECTMTEKRILS 78
Query: 75 EYQNHVVKFLDHFTVLGDNGVHACIVFEL--AGQTLSEFKSINYLNMNCMKDISRQILKG 132
+NH FL V E G + + + + + +I+
Sbjct: 79 LARNH--PFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISA 136
Query: 133 LYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK---NNAF 189
L +LH+ +++ DLK DN+L+ + +AD G + N
Sbjct: 137 LMFLHDK-GIIYRDLKLDNVLL---------------DHEGHCKLADFGMCKEGICNGVT 180
Query: 190 EFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFD 234
+ ++ A E++ G VD W+ + Y+M+ G F+
Sbjct: 181 TATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFE 225
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 117 LNMNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNIL 153
L++N + I+++I+KG+ YLH ++H DLK N+
Sbjct: 127 LDVNKTRQIAQEIVKGMGYLH-AKGILHKDLKSKNVF 162
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 32.0 bits (71), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 62/152 (40%), Gaps = 13/152 (8%)
Query: 13 TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISN 72
L Y + + LG G V L + +T VA++++ + R L +
Sbjct: 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNV---- 187
Query: 73 HHEYQNHVVKFLDHFTVLGDNGVHAC----IVFEL--AGQTLSEFKSINYLNMNCMKDIS 126
E + ++K L+H ++ IV EL G+ + L K
Sbjct: 188 --ETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF 245
Query: 127 RQILKGLYYLHEVCDLVHTDLKHDNILVLTSE 158
Q+L + YLHE ++H DLK +N+L+ + E
Sbjct: 246 YQMLLAVQYLHEN-GIIHRDLKPENVLLSSQE 276
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 31.6 bits (70), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 62/152 (40%), Gaps = 13/152 (8%)
Query: 13 TLISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISN 72
L Y + + LG G V L + +T VA++++ + R L +
Sbjct: 146 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNV---- 201
Query: 73 HHEYQNHVVKFLDHFTVLGDNGVHAC----IVFEL--AGQTLSEFKSINYLNMNCMKDIS 126
E + ++K L+H ++ IV EL G+ + L K
Sbjct: 202 --ETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF 259
Query: 127 RQILKGLYYLHEVCDLVHTDLKHDNILVLTSE 158
Q+L + YLHE ++H DLK +N+L+ + E
Sbjct: 260 YQMLLAVQYLHEN-GIIHRDLKPENVLLSSQE 290
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 31.6 bits (70), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 79/188 (42%), Gaps = 30/188 (15%)
Query: 16 STYFIIRKLGWGFSSTVWLCWNIETSSYVAVKV--MKGAPKFLHITRNEVQLLKITISNH 73
+ Y + RK+G G ++L +I VA+K+ +K LHI ++++ +
Sbjct: 7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVG-- 64
Query: 74 HEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSI--NYLNMNCMKDISRQILK 131
+ G G + +V EL G +L + + ++ + ++ Q++
Sbjct: 65 ----------IPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMIS 114
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK-NNAFE 190
+ Y+H + +H D+K DN L+ LG+K N I D G A K +A
Sbjct: 115 RIEYIHSK-NFIHRDVKPDNFLM----GLGKK--------GNLVYIIDFGLAKKYRDART 161
Query: 191 FDYIQARE 198
+I RE
Sbjct: 162 HQHIPYRE 169
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 31.6 bits (70), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 79/188 (42%), Gaps = 30/188 (15%)
Query: 16 STYFIIRKLGWGFSSTVWLCWNIETSSYVAVKV--MKGAPKFLHITRNEVQLLKITISNH 73
+ Y + RK+G G ++L +I VA+K+ +K LHI ++++ +
Sbjct: 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVG-- 66
Query: 74 HEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSI--NYLNMNCMKDISRQILK 131
+ G G + +V EL G +L + + ++ + ++ Q++
Sbjct: 67 ----------IPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMIS 116
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK-NNAFE 190
+ Y+H + +H D+K DN L+ LG+K N I D G A K +A
Sbjct: 117 RIEYIHSK-NFIHRDVKPDNFLM----GLGKK--------GNLVYIIDFGLAKKYRDART 163
Query: 191 FDYIQARE 198
+I RE
Sbjct: 164 HQHIPYRE 171
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 31.2 bits (69), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 21/106 (19%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA--YK 185
QI KG+YYL E +VH +L N+L+ + + +AD G A
Sbjct: 141 QIAKGMYYLEE-HGMVHRNLAARNVLLKSP---------------SQVQVADFGVADLLP 184
Query: 186 NNAFEFDYIQAR---EFRAAEVVLGGKLGKPVDIWSTACITYQMVT 228
+ + Y +A+ ++ A E + GK D+WS ++++T
Sbjct: 185 PDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 31.2 bits (69), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 21/106 (19%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA--YK 185
QI KG+YYL E +VH +L N+L+ + + +AD G A
Sbjct: 123 QIAKGMYYLEE-HGMVHRNLAARNVLLKSP---------------SQVQVADFGVADLLP 166
Query: 186 NNAFEFDYIQAR---EFRAAEVVLGGKLGKPVDIWSTACITYQMVT 228
+ + Y +A+ ++ A E + GK D+WS ++++T
Sbjct: 167 PDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 30.8 bits (68), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 47/107 (43%), Gaps = 13/107 (12%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNN 187
QI L ++H+ ++H D+K NI LT + Q + VLN+T +L A
Sbjct: 133 QICLALKHVHDR-KILHRDIKSQNIF-LTKDGTVQLGDFGIARVLNST--VELARACIGT 188
Query: 188 AFEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFD 234
+ + + E+ DIW+ C+ Y++ T ++ F+
Sbjct: 189 PY---------YLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFE 226
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 47/116 (40%), Gaps = 29/116 (25%)
Query: 107 TLSEFKSINYLNMNCMKDISRQILKGLYYLHEVCD---------LVHTDLKHDNILVLTS 157
+LS+F N ++ N + I+ + +GL YLHE + H D+K N+L+ +
Sbjct: 108 SLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNN 167
Query: 158 ETLGQKLALEVYEVLNTTNIADLGYAYKNNAFE-----FDYIQAREFRAAEVVLGG 208
T IAD G A K A + + R + A EV+ G
Sbjct: 168 ---------------LTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGA 208
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 19/107 (17%)
Query: 126 SRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYK 185
+ +I L YLH + ++V+ DLK +NIL+ ++ G + + D G +
Sbjct: 145 AAEIASALGYLHSL-NIVYRDLKPENILL---DSQGHIV------------LTDFGLCKE 188
Query: 186 N---NAFEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTG 229
N N+ + E+ A EV+ + VD W + Y+M+ G
Sbjct: 189 NIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 13/116 (11%)
Query: 117 LNMNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTN 176
L+ + + I R++L+GL YLH+ +H D+K NIL LG+ ++++ + +
Sbjct: 113 LDESTIATILREVLEGLEYLHKNGQ-IHRDVKAGNIL------LGEDGSVQIADFGVSAF 165
Query: 177 IADLGYAYKNNAFEFDYIQAREFRAAEV---VLGGKLGKPVDIWSTACITYQMVTG 229
+A G +N + ++ + A EV V G DIWS ++ TG
Sbjct: 166 LATGGDITRNKVRK-TFVGTPCWMAPEVMEQVRGYDFK--ADIWSFGITAIELATG 218
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 13/116 (11%)
Query: 117 LNMNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTN 176
L+ + + I R++L+GL YLH+ +H D+K NIL LG+ ++++ + +
Sbjct: 118 LDESTIATILREVLEGLEYLHKNGQ-IHRDVKAGNIL------LGEDGSVQIADFGVSAF 170
Query: 177 IADLGYAYKNNAFEFDYIQAREFRAAEV---VLGGKLGKPVDIWSTACITYQMVTG 229
+A G +N + ++ + A EV V G DIWS ++ TG
Sbjct: 171 LATGGDITRNKVRK-TFVGTPCWMAPEVMEQVRGYDFK--ADIWSFGITAIELATG 223
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 49/113 (43%), Gaps = 15/113 (13%)
Query: 129 ILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNA 188
I +GL +H H DLK NIL L E GQ + ++ L + N A + A
Sbjct: 143 ICRGLEAIH-AKGYAHRDLKPTNIL-LGDE--GQPVLMD----LGSMNQACIHVEGSRQA 194
Query: 189 FEF-DYIQAR---EFRAAE---VVLGGKLGKPVDIWSTACITYQMVTGEYLFD 234
D+ R +RA E V + + D+WS C+ Y M+ GE +D
Sbjct: 195 LTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYD 247
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 89/222 (40%), Gaps = 23/222 (10%)
Query: 16 STYFIIRKLGWGFSSTVWLCWNI---ETSSYVAVKVMKGAP-KFLHITRNEVQLLKITIS 71
S + +++ LG G V+L + ++ A+KV+K A K R +++ +
Sbjct: 28 SHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADV 87
Query: 72 NHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILK 131
NH VVK H+ + ++ + F G + +K ++
Sbjct: 88 NH----PFVVKL--HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELAL 141
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEF 191
GL +LH + +++ DLK +NIL L E + L ++ ++ A+ F
Sbjct: 142 GLDHLHSLG-IIYRDLKPENIL----------LDEEGHIKLTDFGLSKEAIDHEKKAYSF 190
Query: 192 DYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLF 233
E+ A EVV D WS + ++M+TG F
Sbjct: 191 --CGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPF 230
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 198 EFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDKV 257
E+ A E+++ + VD WS + Y M+TG F N + I+++ + ++P +
Sbjct: 186 EYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFT-GENRKKTIDKILKCKLNLPPYL 244
Query: 258 CNQSR 262
++R
Sbjct: 245 TQEAR 249
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 198 EFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDIPDKV 257
E+ A E+++ + VD WS + Y M+TG F N + I+++ + ++P +
Sbjct: 186 EYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFT-GENRKKTIDKILKCKLNLPPYL 244
Query: 258 CNQSR 262
++R
Sbjct: 245 TQEAR 249
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/134 (20%), Positives = 60/134 (44%), Gaps = 10/134 (7%)
Query: 108 LSEFKSINYLNMNCMKDISRQILKGLYYLH-EVCDLVHTDLKHDNILVLTSETLGQKLAL 166
L + +S L+ + + I Q + + ++H + ++H DLK +N+L+ T+ KL
Sbjct: 124 LKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTI--KLC- 180
Query: 167 EVYEVLNTTNIADLGYAYKNNAF---EFDYIQAREFRAAEVV---LGGKLGKPVDIWSTA 220
+ ++ D ++ + A E +R E++ +G+ DIW+
Sbjct: 181 DFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALG 240
Query: 221 CITYQMVTGEYLFD 234
CI Y + ++ F+
Sbjct: 241 CILYLLCFRQHPFE 254
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 15/108 (13%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNN 187
Q+L+ + + H C ++H D+K +NIL+ + + L++ + + + D Y
Sbjct: 123 QVLEAVRHCHN-CGVLHRDIKDENILIDLN-----RGELKLIDFGSGALLKDTVYT---- 172
Query: 188 AFEFDYIQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFD 234
D+ R + E + + G+ +WS + Y MV G+ F+
Sbjct: 173 ----DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 216
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 15/108 (13%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNN 187
Q+L+ + + H C ++H D+K +NIL+ + + L++ + + + D Y
Sbjct: 122 QVLEAVRHCHN-CGVLHRDIKDENILIDLN-----RGELKLIDFGSGALLKDTVYT---- 171
Query: 188 AFEFDYIQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFD 234
D+ R + E + + G+ +WS + Y MV G+ F+
Sbjct: 172 ----DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 215
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 68/331 (20%), Positives = 130/331 (39%), Gaps = 79/331 (23%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSS------------------YVAVKVMKGAPKFL--- 56
Y ++RKLG G S V+ NI + ++ ++G P +
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLA 98
Query: 57 HITRNEVQLLKITISNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINY 116
I ++ V + H V D F+ QTL+++ Y
Sbjct: 99 DIVKDPVSRTPALVFEH-------VNNTD---------------FKQLRQTLTDYDIRFY 136
Query: 117 LNMNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTN 176
+ +ILK L Y H + ++H D+K N+++ + +KL L
Sbjct: 137 MY---------EILKALDYCHSMG-IMHRDVKPHNVMI---DHEHRKLRL---------- 173
Query: 177 IADLGYA-YKNNAFEFD-YIQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLF 233
D G A + + E++ + +R F+ E+++ ++ +D+WS C+ M+ + F
Sbjct: 174 -IDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
Query: 234 DPNLNDFQHIERMTEILG--DIPDKVCNQS-RLKAEFYDEDGKLLSNNVEQISLTHHLQE 290
+++ + R+ ++LG D+ D + + L F D G+ E+ H +
Sbjct: 233 FHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFV---HSEN 289
Query: 291 RGFSKSESLTFSDLILSMLHWDSDERFTAAQ 321
+ E+L F D +L +D R TA +
Sbjct: 290 QHLVSPEALDFLD---KLLRYDHQSRLTARE 317
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 15/108 (13%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNN 187
Q+L+ + + H C ++H D+K +NIL+ + + L++ + + + D Y
Sbjct: 165 QVLEAVRHCHN-CGVLHRDIKDENILIDLN-----RGELKLIDFGSGALLKDTVYT---- 214
Query: 188 AFEFDYIQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFD 234
D+ R + E + + G+ +WS + Y MV G+ F+
Sbjct: 215 ----DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 258
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 15/108 (13%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNN 187
Q+L+ + + H C ++H D+K +NIL+ + + L++ + + + D Y
Sbjct: 145 QVLEAVRHCHN-CGVLHRDIKDENILIDLN-----RGELKLIDFGSGALLKDTVYT---- 194
Query: 188 AFEFDYIQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFD 234
D+ R + E + + G+ +WS + Y MV G+ F+
Sbjct: 195 ----DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 238
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 15/108 (13%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNN 187
Q+L+ + + H C ++H D+K +NIL+ + + L++ + + + D Y
Sbjct: 137 QVLEAVRHCHN-CGVLHRDIKDENILIDLN-----RGELKLIDFGSGALLKDTVYT---- 186
Query: 188 AFEFDYIQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFD 234
D+ R + E + + G+ +WS + Y MV G+ F+
Sbjct: 187 ----DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 230
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 15/108 (13%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNN 187
Q+L+ + + H C ++H D+K +NIL+ + + L++ + + + D Y
Sbjct: 138 QVLEAVRHCHN-CGVLHRDIKDENILIDLN-----RGELKLIDFGSGALLKDTVYT---- 187
Query: 188 AFEFDYIQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFD 234
D+ R + E + + G+ +WS + Y MV G+ F+
Sbjct: 188 ----DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 231
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 15/108 (13%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNN 187
Q+L+ + + H C ++H D+K +NIL+ + + L++ + + + D Y
Sbjct: 157 QVLEAVRHCHN-CGVLHRDIKDENILIDLN-----RGELKLIDFGSGALLKDTVYT---- 206
Query: 188 AFEFDYIQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFD 234
D+ R + E + + G+ +WS + Y MV G+ F+
Sbjct: 207 ----DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 250
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 15/108 (13%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNN 187
Q+L+ + + H C ++H D+K +NIL+ + + L++ + + + D Y
Sbjct: 121 QVLEAVRHCHN-CGVLHRDIKDENILIDLN-----RGELKLIDFGSGALLKDTVYT---- 170
Query: 188 AFEFDYIQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFD 234
D+ R + E + + G+ +WS + Y MV G+ F+
Sbjct: 171 ----DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 214
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 15/108 (13%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNN 187
Q+L+ + + H C ++H D+K +NIL+ + + L++ + + + D Y
Sbjct: 123 QVLEAVRHCHN-CGVLHRDIKDENILIDLN-----RGELKLIDFGSGALLKDTVYT---- 172
Query: 188 AFEFDYIQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFD 234
D+ R + E + + G+ +WS + Y MV G+ F+
Sbjct: 173 ----DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 216
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 15/108 (13%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNN 187
Q+L+ + + H C ++H D+K +NIL+ + + L++ + + + D Y
Sbjct: 122 QVLEAVRHCHN-CGVLHRDIKDENILIDLN-----RGELKLIDFGSGALLKDTVYT---- 171
Query: 188 AFEFDYIQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFD 234
D+ R + E + + G+ +WS + Y MV G+ F+
Sbjct: 172 ----DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 215
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 45/108 (41%), Gaps = 25/108 (23%)
Query: 128 QILKGLYYL--HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLG---- 181
QI G+ YL H V VH DL N+LV Y+ LN I+DLG
Sbjct: 153 QIAAGMEYLSSHHV---VHKDLATRNVLV--------------YDKLNV-KISDLGLFRE 194
Query: 182 -YAYKNNAFEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVT 228
YA + + + A E ++ GK DIWS + +++ +
Sbjct: 195 VYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 15/108 (13%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNN 187
Q+L+ + + H C ++H D+K +NIL+ + + L++ + + + D Y
Sbjct: 138 QVLEAVRHCHN-CGVLHRDIKDENILIDLN-----RGELKLIDFGSGALLKDTVYT---- 187
Query: 188 AFEFDYIQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFD 234
D+ R + E + + G+ +WS + Y MV G+ F+
Sbjct: 188 ----DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 231
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 15/108 (13%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNN 187
Q+L+ + + H C ++H D+K +NIL+ + + L++ + + + D Y
Sbjct: 151 QVLEAVRHCHN-CGVLHRDIKDENILIDLN-----RGELKLIDFGSGALLKDTVYT---- 200
Query: 188 AFEFDYIQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFD 234
D+ R + E + + G+ +WS + Y MV G+ F+
Sbjct: 201 ----DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 15/108 (13%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNN 187
Q+L+ + + H C ++H D+K +NIL+ + + L++ + + + D Y
Sbjct: 151 QVLEAVRHCHN-CGVLHRDIKDENILIDLN-----RGELKLIDFGSGALLKDTVYT---- 200
Query: 188 AFEFDYIQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFD 234
D+ R + E + + G+ +WS + Y MV G+ F+
Sbjct: 201 ----DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 15/108 (13%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNN 187
Q+L+ + + H C ++H D+K +NIL+ + + L++ + + + D Y
Sbjct: 150 QVLEAVRHCHN-CGVLHRDIKDENILIDLN-----RGELKLIDFGSGALLKDTVYT---- 199
Query: 188 AFEFDYIQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFD 234
D+ R + E + + G+ +WS + Y MV G+ F+
Sbjct: 200 ----DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 15/108 (13%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNN 187
Q+L+ + + H C ++H D+K +NIL+ + + L++ + + + D Y
Sbjct: 165 QVLEAVRHCHN-CGVLHRDIKDENILIDLN-----RGELKLIDFGSGALLKDTVYT---- 214
Query: 188 AFEFDYIQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFD 234
D+ R + E + + G+ +WS + Y MV G+ F+
Sbjct: 215 ----DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 258
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 15/108 (13%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNN 187
Q+L+ + + H C ++H D+K +NIL+ + + L++ + + + D Y
Sbjct: 150 QVLEAVRHCHN-CGVLHRDIKDENILIDLN-----RGELKLIDFGSGALLKDTVYT---- 199
Query: 188 AFEFDYIQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFD 234
D+ R + E + + G+ +WS + Y MV G+ F+
Sbjct: 200 ----DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 15/108 (13%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNN 187
Q+L+ + + H C ++H D+K +NIL+ + + L++ + + + D Y
Sbjct: 150 QVLEAVRHCHN-CGVLHRDIKDENILIDLN-----RGELKLIDFGSGALLKDTVYT---- 199
Query: 188 AFEFDYIQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFD 234
D+ R + E + + G+ +WS + Y MV G+ F+
Sbjct: 200 ----DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 15/108 (13%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNN 187
Q+L+ + + H C ++H D+K +NIL+ + + L++ + + + D Y
Sbjct: 151 QVLEAVRHCHN-CGVLHRDIKDENILIDLN-----RGELKLIDFGSGALLKDTVYT---- 200
Query: 188 AFEFDYIQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFD 234
D+ R + E + + G+ +WS + Y MV G+ F+
Sbjct: 201 ----DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 15/108 (13%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNN 187
Q+L+ + + H C ++H D+K +NIL+ + + L++ + + + D Y
Sbjct: 170 QVLEAVRHCHN-CGVLHRDIKDENILIDLN-----RGELKLIDFGSGALLKDTVYT---- 219
Query: 188 AFEFDYIQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFD 234
D+ R + E + + G+ +WS + Y MV G+ F+
Sbjct: 220 ----DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 263
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 15/108 (13%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNN 187
Q+L+ + + H C ++H D+K +NIL+ + + L++ + + + D Y
Sbjct: 138 QVLEAVRHCHN-CGVLHRDIKDENILIDLN-----RGELKLIDFGSGALLKDTVYT---- 187
Query: 188 AFEFDYIQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFD 234
D+ R + E + + G+ +WS + Y MV G+ F+
Sbjct: 188 ----DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 231
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 67/329 (20%), Positives = 130/329 (39%), Gaps = 75/329 (22%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSS------------------YVAVKVMKGAPKFLHIT 59
Y ++RKLG G S V+ NI + ++ ++G P + +
Sbjct: 44 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLA 103
Query: 60 RNEVQLLKITISNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSI-NYLN 118
++K +S +VFE T +FK + L
Sbjct: 104 ----DIVKDPVSR-----------------------TPALVFEHVNNT--DFKQLYQTLT 134
Query: 119 MNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIA 178
++ +ILK L Y H + ++H D+K N+++ + +KL L
Sbjct: 135 DYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVMI---DHEHRKLRL-----------I 179
Query: 179 DLGYA-YKNNAFEFD-YIQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFDP 235
D G A + + E++ + +R F+ E+++ ++ +D+WS C+ M+ + F
Sbjct: 180 DWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 239
Query: 236 NLNDFQHIERMTEILG--DIPDKVCNQS-RLKAEFYDEDGKLLSNNVEQISLTHHLQERG 292
+++ + R+ ++LG D+ D + + L F D G+ E+ H + +
Sbjct: 240 GHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFV---HSENQH 296
Query: 293 FSKSESLTFSDLILSMLHWDSDERFTAAQ 321
E+L F D +L +D R TA +
Sbjct: 297 LVSPEALDFLD---KLLRYDHQSRLTARE 322
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 15/108 (13%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNN 187
Q+L+ + + H C ++H D+K +NIL+ + + L++ + + + D Y
Sbjct: 151 QVLEAVRHCHN-CGVLHRDIKDENILIDLN-----RGELKLIDFGSGALLKDTVYT---- 200
Query: 188 AFEFDYIQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFD 234
D+ R + E + + G+ +WS + Y MV G+ F+
Sbjct: 201 ----DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 15/108 (13%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNN 187
Q+L+ + + H C ++H D+K +NIL+ + + L++ + + + D Y
Sbjct: 150 QVLEAVRHCHN-CGVLHRDIKDENILIDLN-----RGELKLIDFGSGALLKDTVYT---- 199
Query: 188 AFEFDYIQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFD 234
D+ R + E + + G+ +WS + Y MV G+ F+
Sbjct: 200 ----DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 67/329 (20%), Positives = 130/329 (39%), Gaps = 75/329 (22%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSS------------------YVAVKVMKGAPKFLHIT 59
Y ++RKLG G S V+ NI + ++ ++G P + +
Sbjct: 37 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLA 96
Query: 60 RNEVQLLKITISNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSI-NYLN 118
++K +S +VFE T +FK + L
Sbjct: 97 ----DIVKDPVSR-----------------------TPALVFEHVNNT--DFKQLYQTLT 127
Query: 119 MNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIA 178
++ +ILK L Y H + ++H D+K N+++ + +KL L
Sbjct: 128 DYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVMI---DHEHRKLRL-----------I 172
Query: 179 DLGYA-YKNNAFEFD-YIQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFDP 235
D G A + + E++ + +R F+ E+++ ++ +D+WS C+ M+ + F
Sbjct: 173 DWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 232
Query: 236 NLNDFQHIERMTEILG--DIPDKVCNQS-RLKAEFYDEDGKLLSNNVEQISLTHHLQERG 292
+++ + R+ ++LG D+ D + + L F D G+ E+ H + +
Sbjct: 233 GHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFV---HSENQH 289
Query: 293 FSKSESLTFSDLILSMLHWDSDERFTAAQ 321
E+L F D +L +D R TA +
Sbjct: 290 LVSPEALDFLD---KLLRYDHQSRLTARE 315
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 15/108 (13%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNN 187
Q+L+ + + H C ++H D+K +NIL+ + + L++ + + + D Y
Sbjct: 137 QVLEAVRHCHN-CGVLHRDIKDENILIDLN-----RGELKLIDFGSGALLKDTVYT---- 186
Query: 188 AFEFDYIQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFD 234
D+ R + E + + G+ +WS + Y MV G+ F+
Sbjct: 187 ----DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 230
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 15/108 (13%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNN 187
Q+L+ + + H C ++H D+K +NIL+ + + L++ + + + D Y
Sbjct: 118 QVLEAVRHCHN-CGVLHRDIKDENILIDLN-----RGELKLIDFGSGALLKDTVYT---- 167
Query: 188 AFEFDYIQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFD 234
D+ R + E + + G+ +WS + Y MV G+ F+
Sbjct: 168 ----DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 211
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 15/108 (13%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNN 187
Q+L+ + + H C ++H D+K +NIL+ + + L++ + + + D Y
Sbjct: 118 QVLEAVRHCHN-CGVLHRDIKDENILIDLN-----RGELKLIDFGSGALLKDTVYT---- 167
Query: 188 AFEFDYIQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFD 234
D+ R + E + + G+ +WS + Y MV G+ F+
Sbjct: 168 ----DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 211
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 45/108 (41%), Gaps = 25/108 (23%)
Query: 128 QILKGLYYL--HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLG---- 181
QI G+ YL H V VH DL N+LV Y+ LN I+DLG
Sbjct: 136 QIAAGMEYLSSHHV---VHKDLATRNVLV--------------YDKLNV-KISDLGLFRE 177
Query: 182 -YAYKNNAFEFDYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVT 228
YA + + + A E ++ GK DIWS + +++ +
Sbjct: 178 VYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 15/108 (13%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNN 187
Q+L+ + + H C ++H D+K +NIL+ + + L++ + + + D Y
Sbjct: 123 QVLEAVRHCHN-CGVLHRDIKDENILIDLN-----RGELKLIDFGSGALLKDTVYT---- 172
Query: 188 AFEFDYIQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFD 234
D+ R + E + + G+ +WS + Y MV G+ F+
Sbjct: 173 ----DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 216
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 15/108 (13%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNN 187
Q+L+ + + H C ++H D+K +NIL+ + + L++ + + + D Y
Sbjct: 165 QVLEAVRHCHN-CGVLHRDIKDENILIDLN-----RGELKLIDFGSGALLKDTVYT---- 214
Query: 188 AFEFDYIQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFD 234
D+ R + E + + G+ +WS + Y MV G+ F+
Sbjct: 215 ----DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 258
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 29.3 bits (64), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 67/329 (20%), Positives = 130/329 (39%), Gaps = 75/329 (22%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSS------------------YVAVKVMKGAPKFLHIT 59
Y ++RKLG G S V+ NI + ++ ++G P + +
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLA 98
Query: 60 RNEVQLLKITISNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSI-NYLN 118
++K +S +VFE T +FK + L
Sbjct: 99 ----DIVKDPVSR-----------------------TPALVFEHVNNT--DFKQLYQTLT 129
Query: 119 MNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIA 178
++ +ILK L Y H + ++H D+K N+++ + +KL L
Sbjct: 130 DYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVMI---DHEHRKLRL-----------I 174
Query: 179 DLGYA-YKNNAFEFD-YIQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFDP 235
D G A + + E++ + +R F+ E+++ ++ +D+WS C+ M+ + F
Sbjct: 175 DWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 234
Query: 236 NLNDFQHIERMTEILG--DIPDKVCNQS-RLKAEFYDEDGKLLSNNVEQISLTHHLQERG 292
+++ + R+ ++LG D+ D + + L F D G+ E+ H + +
Sbjct: 235 GHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFV---HSENQH 291
Query: 293 FSKSESLTFSDLILSMLHWDSDERFTAAQ 321
E+L F D +L +D R TA +
Sbjct: 292 LVSPEALDFLD---KLLRYDHQSRLTARE 317
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 29.3 bits (64), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 67/329 (20%), Positives = 130/329 (39%), Gaps = 75/329 (22%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSS------------------YVAVKVMKGAPKFLHIT 59
Y ++RKLG G S V+ NI + ++ ++G P + +
Sbjct: 38 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLA 97
Query: 60 RNEVQLLKITISNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSI-NYLN 118
++K +S +VFE T +FK + L
Sbjct: 98 ----DIVKDPVSR-----------------------TPALVFEHVNNT--DFKQLYQTLT 128
Query: 119 MNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIA 178
++ +ILK L Y H + ++H D+K N+++ + +KL L
Sbjct: 129 DYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVMI---DHEHRKLRL-----------I 173
Query: 179 DLGYA-YKNNAFEFD-YIQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFDP 235
D G A + + E++ + +R F+ E+++ ++ +D+WS C+ M+ + F
Sbjct: 174 DWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 233
Query: 236 NLNDFQHIERMTEILG--DIPDKVCNQS-RLKAEFYDEDGKLLSNNVEQISLTHHLQERG 292
+++ + R+ ++LG D+ D + + L F D G+ E+ H + +
Sbjct: 234 GHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFV---HSENQH 290
Query: 293 FSKSESLTFSDLILSMLHWDSDERFTAAQ 321
E+L F D +L +D R TA +
Sbjct: 291 LVSPEALDFLD---KLLRYDHQSRLTARE 316
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 29.3 bits (64), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 67/329 (20%), Positives = 130/329 (39%), Gaps = 75/329 (22%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSS------------------YVAVKVMKGAPKFLHIT 59
Y ++RKLG G S V+ NI + ++ ++G P + +
Sbjct: 38 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLA 97
Query: 60 RNEVQLLKITISNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSI-NYLN 118
++K +S +VFE T +FK + L
Sbjct: 98 ----DIVKDPVSR-----------------------TPALVFEHVNNT--DFKQLYQTLT 128
Query: 119 MNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIA 178
++ +ILK L Y H + ++H D+K N+++ + +KL L
Sbjct: 129 DYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVMI---DHEHRKLRL-----------I 173
Query: 179 DLGYA-YKNNAFEFD-YIQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFDP 235
D G A + + E++ + +R F+ E+++ ++ +D+WS C+ M+ + F
Sbjct: 174 DWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 233
Query: 236 NLNDFQHIERMTEILG--DIPDKVCNQS-RLKAEFYDEDGKLLSNNVEQISLTHHLQERG 292
+++ + R+ ++LG D+ D + + L F D G+ E+ H + +
Sbjct: 234 GHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFV---HSENQH 290
Query: 293 FSKSESLTFSDLILSMLHWDSDERFTAAQ 321
E+L F D +L +D R TA +
Sbjct: 291 LVSPEALDFLD---KLLRYDHQSRLTARE 316
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 29.3 bits (64), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 67/329 (20%), Positives = 130/329 (39%), Gaps = 75/329 (22%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSS------------------YVAVKVMKGAPKFLHIT 59
Y ++RKLG G S V+ NI + ++ ++G P + +
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLA 98
Query: 60 RNEVQLLKITISNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSI-NYLN 118
++K +S +VFE T +FK + L
Sbjct: 99 ----DIVKDPVSR-----------------------TPALVFEHVNNT--DFKQLYQTLT 129
Query: 119 MNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIA 178
++ +ILK L Y H + ++H D+K N+++ + +KL L
Sbjct: 130 DYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVMI---DHEHRKLRL-----------I 174
Query: 179 DLGYA-YKNNAFEFD-YIQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFDP 235
D G A + + E++ + +R F+ E+++ ++ +D+WS C+ M+ + F
Sbjct: 175 DWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 234
Query: 236 NLNDFQHIERMTEILG--DIPDKVCNQS-RLKAEFYDEDGKLLSNNVEQISLTHHLQERG 292
+++ + R+ ++LG D+ D + + L F D G+ E+ H + +
Sbjct: 235 GHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFV---HSENQH 291
Query: 293 FSKSESLTFSDLILSMLHWDSDERFTAAQ 321
E+L F D +L +D R TA +
Sbjct: 292 LVSPEALDFLD---KLLRYDHQSRLTARE 317
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 29.3 bits (64), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 67/329 (20%), Positives = 130/329 (39%), Gaps = 75/329 (22%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSS------------------YVAVKVMKGAPKFLHIT 59
Y ++RKLG G S V+ NI + ++ ++G P + +
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLA 98
Query: 60 RNEVQLLKITISNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSI-NYLN 118
++K +S +VFE T +FK + L
Sbjct: 99 ----DIVKDPVSR-----------------------TPALVFEHVNNT--DFKQLYQTLT 129
Query: 119 MNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIA 178
++ +ILK L Y H + ++H D+K N+++ + +KL L
Sbjct: 130 DYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVMI---DHEHRKLRL-----------I 174
Query: 179 DLGYA-YKNNAFEFD-YIQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFDP 235
D G A + + E++ + +R F+ E+++ ++ +D+WS C+ M+ + F
Sbjct: 175 DWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 234
Query: 236 NLNDFQHIERMTEILG--DIPDKVCNQS-RLKAEFYDEDGKLLSNNVEQISLTHHLQERG 292
+++ + R+ ++LG D+ D + + L F D G+ E+ H + +
Sbjct: 235 GHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFV---HSENQH 291
Query: 293 FSKSESLTFSDLILSMLHWDSDERFTAAQ 321
E+L F D +L +D R TA +
Sbjct: 292 LVSPEALDFLD---KLLRYDHQSRLTARE 317
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 67/329 (20%), Positives = 130/329 (39%), Gaps = 75/329 (22%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSS------------------YVAVKVMKGAPKFLHIT 59
Y ++RKLG G S V+ NI + ++ ++G P + +
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLA 98
Query: 60 RNEVQLLKITISNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSI-NYLN 118
++K +S +VFE T +FK + L
Sbjct: 99 ----DIVKDPVSR-----------------------TPALVFEHVNNT--DFKQLYQTLT 129
Query: 119 MNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIA 178
++ +ILK L Y H + ++H D+K N+++ + +KL L
Sbjct: 130 DYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVMI---DHEHRKLRL-----------I 174
Query: 179 DLGYA-YKNNAFEFD-YIQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFDP 235
D G A + + E++ + +R F+ E+++ ++ +D+WS C+ M+ + F
Sbjct: 175 DWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 234
Query: 236 NLNDFQHIERMTEILG--DIPDKVCNQS-RLKAEFYDEDGKLLSNNVEQISLTHHLQERG 292
+++ + R+ ++LG D+ D + + L F D G+ E+ H + +
Sbjct: 235 GHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFV---HSENQH 291
Query: 293 FSKSESLTFSDLILSMLHWDSDERFTAAQ 321
E+L F D +L +D R TA +
Sbjct: 292 LVSPEALDFLD---KLLRYDHQSRLTARE 317
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 67/329 (20%), Positives = 130/329 (39%), Gaps = 75/329 (22%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSS------------------YVAVKVMKGAPKFLHIT 59
Y ++RKLG G S V+ NI + ++ ++G P + +
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLA 98
Query: 60 RNEVQLLKITISNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSI-NYLN 118
++K +S +VFE T +FK + L
Sbjct: 99 ----DIVKDPVSR-----------------------TPALVFEHVNNT--DFKQLYQTLT 129
Query: 119 MNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIA 178
++ +ILK L Y H + ++H D+K N+++ + +KL L
Sbjct: 130 DYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVMI---DHEHRKLRL-----------I 174
Query: 179 DLGYA-YKNNAFEFD-YIQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFDP 235
D G A + + E++ + +R F+ E+++ ++ +D+WS C+ M+ + F
Sbjct: 175 DWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 234
Query: 236 NLNDFQHIERMTEILG--DIPDKVCNQS-RLKAEFYDEDGKLLSNNVEQISLTHHLQERG 292
+++ + R+ ++LG D+ D + + L F D G+ E+ H + +
Sbjct: 235 GHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFV---HSENQH 291
Query: 293 FSKSESLTFSDLILSMLHWDSDERFTAAQ 321
E+L F D +L +D R TA +
Sbjct: 292 LVSPEALDFLD---KLLRYDHQSRLTARE 317
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 67/329 (20%), Positives = 130/329 (39%), Gaps = 75/329 (22%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSS------------------YVAVKVMKGAPKFLHIT 59
Y ++RKLG G S V+ NI + ++ ++G P + +
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLA 98
Query: 60 RNEVQLLKITISNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSI-NYLN 118
++K +S +VFE T +FK + L
Sbjct: 99 ----DIVKDPVSR-----------------------TPALVFEHVNNT--DFKQLYQTLT 129
Query: 119 MNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIA 178
++ +ILK L Y H + ++H D+K N+++ + +KL L
Sbjct: 130 DYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVMI---DHEHRKLRL-----------I 174
Query: 179 DLGYA-YKNNAFEFD-YIQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFDP 235
D G A + + E++ + +R F+ E+++ ++ +D+WS C+ M+ + F
Sbjct: 175 DWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 234
Query: 236 NLNDFQHIERMTEILG--DIPDKVCNQS-RLKAEFYDEDGKLLSNNVEQISLTHHLQERG 292
+++ + R+ ++LG D+ D + + L F D G+ E+ H + +
Sbjct: 235 GHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFV---HSENQH 291
Query: 293 FSKSESLTFSDLILSMLHWDSDERFTAAQ 321
E+L F D +L +D R TA +
Sbjct: 292 LVSPEALDFLD---KLLRYDHQSRLTARE 317
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 68/331 (20%), Positives = 130/331 (39%), Gaps = 79/331 (23%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSS------------------YVAVKVMKGAPKFL--- 56
Y ++RKLG G S V+ NI + ++ ++G P +
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLA 98
Query: 57 HITRNEVQLLKITISNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINY 116
I ++ V + H V D F+ QTL+++ Y
Sbjct: 99 DIVKDPVSRTPALVFEH-------VNNTD---------------FKQLYQTLTDYDIRFY 136
Query: 117 LNMNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTN 176
+ +ILK L Y H + ++H D+K N+++ + +KL L
Sbjct: 137 MY---------EILKALDYCHSMG-IMHRDVKPHNVMI---DHEHRKLRL---------- 173
Query: 177 IADLGYA-YKNNAFEFD-YIQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLF 233
D G A + + E++ + +R F+ E+++ ++ +D+WS C+ M+ + F
Sbjct: 174 -IDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPF 232
Query: 234 DPNLNDFQHIERMTEILG--DIPDKVCNQS-RLKAEFYDEDGKLLSNNVEQISLTHHLQE 290
+++ + R+ ++LG D+ D + + L F D G+ E+ H +
Sbjct: 233 FHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFV---HSEN 289
Query: 291 RGFSKSESLTFSDLILSMLHWDSDERFTAAQ 321
+ E+L F D +L +D R TA +
Sbjct: 290 QHLVSPEALDFLD---KLLRYDHQSRLTARE 317
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 87/220 (39%), Gaps = 24/220 (10%)
Query: 24 LGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITR--NEVQLLKITISNHHEYQNHVV 81
LG G + V C N+ TS AVK+++ P + +R EV++L ++ Q H
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIR-SRVFREVEML-------YQCQGHRN 72
Query: 82 KFLDHFTVLGDNGVHACIVFE--LAGQTLSEFKSINYLNMNCMKDISRQILKGLYYLHEV 139
++ + +VFE G LS + N + + + L +LH
Sbjct: 73 VLELIEFFEEEDRFY--LVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNK 130
Query: 140 CDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFE-FDYIQARE 198
+ H DLK +NIL E Q +++ + + I G + E + E
Sbjct: 131 -GIAHRDLKPENILC---EHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAE 186
Query: 199 FRAAEVV-----LGGKLGKPVDIWSTACITYQMVTGEYLF 233
+ A EVV K D+WS I Y +++G F
Sbjct: 187 YMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 67/329 (20%), Positives = 130/329 (39%), Gaps = 75/329 (22%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSS------------------YVAVKVMKGAPKFLHIT 59
Y ++RKLG G S V+ NI + ++ ++G P + +
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLA 98
Query: 60 RNEVQLLKITISNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSI-NYLN 118
++K +S +VFE T +FK + L
Sbjct: 99 ----DIVKDPVSR-----------------------TPALVFEHVNNT--DFKQLYQTLT 129
Query: 119 MNCMKDISRQILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIA 178
++ +ILK L Y H + ++H D+K N+++ + +KL L
Sbjct: 130 DYDIRFYMYEILKALDYCHSMG-IMHRDVKPHNVMI---DHEHRKLRL-----------I 174
Query: 179 DLGYA-YKNNAFEFD-YIQAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFDP 235
D G A + + E++ + +R F+ E+++ ++ +D+WS C+ M+ + F
Sbjct: 175 DWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 234
Query: 236 NLNDFQHIERMTEILG--DIPDKVCNQS-RLKAEFYDEDGKLLSNNVEQISLTHHLQERG 292
+++ + R+ ++LG D+ D + + L F D G+ E+ H + +
Sbjct: 235 GHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFV---HSENQH 291
Query: 293 FSKSESLTFSDLILSMLHWDSDERFTAAQ 321
E+L F D +L +D R TA +
Sbjct: 292 LVSPEALDFLD---KLLRYDHQSRLTARE 317
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 28.9 bits (63), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 87/220 (39%), Gaps = 24/220 (10%)
Query: 24 LGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITR--NEVQLLKITISNHHEYQNHVV 81
LG G + V C N+ TS AVK+++ P + +R EV++L ++ Q H
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIR-SRVFREVEML-------YQCQGHRN 72
Query: 82 KFLDHFTVLGDNGVHACIVFE--LAGQTLSEFKSINYLNMNCMKDISRQILKGLYYLHEV 139
++ + +VFE G LS + N + + + L +LH
Sbjct: 73 VLELIEFFEEEDRFY--LVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNK 130
Query: 140 CDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFE-FDYIQARE 198
+ H DLK +NIL E Q +++ + + I G + E + E
Sbjct: 131 -GIAHRDLKPENILC---EHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAE 186
Query: 199 FRAAEVV-----LGGKLGKPVDIWSTACITYQMVTGEYLF 233
+ A EVV K D+WS I Y +++G F
Sbjct: 187 YMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 28.9 bits (63), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 40/225 (17%), Positives = 87/225 (38%), Gaps = 29/225 (12%)
Query: 15 ISTYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGA----PKFLHITRNEVQLLKITI 70
I + I R LG G V+L ++ VA+KV+ + H R E+++
Sbjct: 22 IDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEI----- 76
Query: 71 SNHHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQIL 130
H + ++++ ++F ++ + + G+ E + + I ++
Sbjct: 77 -QAHLHHPNILRLYNYF--YDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELA 133
Query: 131 KGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFE 190
L Y H ++H D+K +N+L+ IAD G++ +
Sbjct: 134 DALMYCHGK-KVIHRDIKPENLLLGLK---------------GELKIADFGWSVHAPSLR 177
Query: 191 FDYIQAR-EFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLFD 234
+ ++ E++ G + VD+W + Y+++ G F+
Sbjct: 178 RKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFE 222
>pdb|2OBX|A Chain A, Lumazine Synthase Ribh2 From Mesorhizobium Loti (gene
Mll7281, Swiss- Prot Entry Q986n2) Complexed With
Inhibitor 5-nitro-6-(d- Ribitylamino)-2,4(1h,3h)
Pyrimidinedione
pdb|2OBX|B Chain B, Lumazine Synthase Ribh2 From Mesorhizobium Loti (gene
Mll7281, Swiss- Prot Entry Q986n2) Complexed With
Inhibitor 5-nitro-6-(d- Ribitylamino)-2,4(1h,3h)
Pyrimidinedione
pdb|2OBX|C Chain C, Lumazine Synthase Ribh2 From Mesorhizobium Loti (gene
Mll7281, Swiss- Prot Entry Q986n2) Complexed With
Inhibitor 5-nitro-6-(d- Ribitylamino)-2,4(1h,3h)
Pyrimidinedione
pdb|2OBX|D Chain D, Lumazine Synthase Ribh2 From Mesorhizobium Loti (gene
Mll7281, Swiss- Prot Entry Q986n2) Complexed With
Inhibitor 5-nitro-6-(d- Ribitylamino)-2,4(1h,3h)
Pyrimidinedione
pdb|2OBX|E Chain E, Lumazine Synthase Ribh2 From Mesorhizobium Loti (gene
Mll7281, Swiss- Prot Entry Q986n2) Complexed With
Inhibitor 5-nitro-6-(d- Ribitylamino)-2,4(1h,3h)
Pyrimidinedione
pdb|2OBX|F Chain F, Lumazine Synthase Ribh2 From Mesorhizobium Loti (gene
Mll7281, Swiss- Prot Entry Q986n2) Complexed With
Inhibitor 5-nitro-6-(d- Ribitylamino)-2,4(1h,3h)
Pyrimidinedione
pdb|2OBX|G Chain G, Lumazine Synthase Ribh2 From Mesorhizobium Loti (gene
Mll7281, Swiss- Prot Entry Q986n2) Complexed With
Inhibitor 5-nitro-6-(d- Ribitylamino)-2,4(1h,3h)
Pyrimidinedione
pdb|2OBX|H Chain H, Lumazine Synthase Ribh2 From Mesorhizobium Loti (gene
Mll7281, Swiss- Prot Entry Q986n2) Complexed With
Inhibitor 5-nitro-6-(d- Ribitylamino)-2,4(1h,3h)
Pyrimidinedione
pdb|2OBX|I Chain I, Lumazine Synthase Ribh2 From Mesorhizobium Loti (gene
Mll7281, Swiss- Prot Entry Q986n2) Complexed With
Inhibitor 5-nitro-6-(d- Ribitylamino)-2,4(1h,3h)
Pyrimidinedione
pdb|2OBX|J Chain J, Lumazine Synthase Ribh2 From Mesorhizobium Loti (gene
Mll7281, Swiss- Prot Entry Q986n2) Complexed With
Inhibitor 5-nitro-6-(d- Ribitylamino)-2,4(1h,3h)
Pyrimidinedione
Length = 157
Score = 28.9 bits (63), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 25/57 (43%)
Query: 43 YVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQNHVVKFLDHFTVLGDNGVHACI 99
+VA V+ G T V +T N+H+ H F +HFTV G AC+
Sbjct: 90 FVASAVIDGMMNVQLSTGVPVLSAVLTPHNYHDSAEHHRFFFEHFTVKGKEAARACV 146
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 28.5 bits (62), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 86/221 (38%), Gaps = 21/221 (9%)
Query: 16 STYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQL---LKITISN 72
S + +++ LG G V+L I S + MK K R+ V+ I +
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 73 HHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKG 132
+H + +VK H+ + ++ + F G + +K ++
Sbjct: 84 NHPF---IVKL--HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALA 138
Query: 133 LYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFD 192
L +LH + +++ DLK +NIL L E + L ++ ++ A+ F
Sbjct: 139 LDHLHSLG-IIYRDLKPENIL----------LDEEGHIKLTDFGLSKESIDHEKKAYSF- 186
Query: 193 YIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLF 233
E+ A EVV + D WS + ++M+TG F
Sbjct: 187 -CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 28.5 bits (62), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 86/221 (38%), Gaps = 21/221 (9%)
Query: 16 STYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQL---LKITISN 72
S + +++ LG G V+L I S + MK K R+ V+ I +
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 84
Query: 73 HHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKG 132
+H + +VK H+ + ++ + F G + +K ++
Sbjct: 85 NHPF---IVKL--HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALA 139
Query: 133 LYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFD 192
L +LH + +++ DLK +NIL L E + L ++ ++ A+ F
Sbjct: 140 LDHLHSLG-IIYRDLKPENIL----------LDEEGHIKLTDFGLSKESIDHEKKAYSF- 187
Query: 193 YIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLF 233
E+ A EVV + D WS + ++M+TG F
Sbjct: 188 -CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 227
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 28.5 bits (62), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 86/221 (38%), Gaps = 21/221 (9%)
Query: 16 STYFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQL---LKITISN 72
S + +++ LG G V+L I S + MK K R+ V+ I +
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 73 HHEYQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILKG 132
+H + +VK H+ + ++ + F G + +K ++
Sbjct: 84 NHPF---IVKL--HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALA 138
Query: 133 LYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFD 192
L +LH + +++ DLK +NIL L E + L ++ ++ A+ F
Sbjct: 139 LDHLHSLG-IIYRDLKPENIL----------LDEEGHIKLTDFGLSKESIDHEKKAYSF- 186
Query: 193 YIQAREFRAAEVVLGGKLGKPVDIWSTACITYQMVTGEYLF 233
E+ A EVV + D WS + ++M+TG F
Sbjct: 187 -CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 28.5 bits (62), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 48/118 (40%), Gaps = 28/118 (23%)
Query: 143 VHTDLKHDNILVLTSETLGQKLA-----LEVYEVLNTTNIADLGYAYKNNAFEFDYIQAR 197
VH D+K DNIL+ + + +LA L++ E + +G DYI
Sbjct: 197 VHRDIKPDNILMDMNGHI--RLADFGSCLKLMEDGTVQSSVAVGTP--------DYISPE 246
Query: 198 EFRAAEVVLGGK--LGKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDI 253
+A E GGK G D WS Y+M+ GE F + E + E G I
Sbjct: 247 ILQAME---GGKGRYGPECDWWSLGVCMYEMLYGETPF--------YAESLVETYGKI 293
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 28.1 bits (61), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 108/238 (45%), Gaps = 30/238 (12%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQ 77
Y ++RKLG G S V+ NI + V VK++K + +++ + N
Sbjct: 40 YQLVRKLGRGKYSEVFEAINITNNERVVVKILKPV------KKKKIKREVKILENLRGGT 93
Query: 78 NHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSI-NYLNMNCMKDISRQILKGLYYL 136
N ++K +D TV +VFE T +FK + L ++ ++LK L Y
Sbjct: 94 N-IIKLID--TVKDPVSKTPALVFEYINNT--DFKQLYQILTDFDIRFYMYELLKALDYC 148
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA-YKNNAFEFD-YI 194
H ++H D+K N+++ + +KL L D G A + + A E++ +
Sbjct: 149 HSKG-IMHRDVKPHNVMIDHQQ---KKLRL-----------IDWGLAEFYHPAQEYNVRV 193
Query: 195 QAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILG 251
+R F+ E+++ ++ +D+WS C+ M+ F +++ + R+ ++LG
Sbjct: 194 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLG 251
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 28.1 bits (61), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 61/155 (39%), Gaps = 33/155 (21%)
Query: 74 HEY--QNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMKDISRQILK 131
+EY + ++KF ++F VL N + C ++ + +K I + +L
Sbjct: 122 YEYMENDSILKFDEYFFVLDKN--YTC-----------------FIPIQVIKCIIKSVLN 162
Query: 132 GLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEF 191
Y+H ++ H D+K NIL + + +++ + + + D +EF
Sbjct: 163 SFSYIHNEKNICHRDVKPSNIL------MDKNGRVKLSDFGESEYMVDKKIKGSRGTYEF 216
Query: 192 DYIQAREFRAAEVVLGGKLGKPVDIWSTACITYQM 226
EF + E G VDIWS Y M
Sbjct: 217 ---MPPEFFSNESSYN---GAKVDIWSLGICLYVM 245
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 28.1 bits (61), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 136/313 (43%), Gaps = 43/313 (13%)
Query: 18 YFIIRKLGWGFSSTVWLCWNIETSSYVAVKVMKGAPKFLHITRNEVQLLKITISNHHEYQ 77
Y ++RKLG G S V+ NI + V VK++K + +++ + N
Sbjct: 45 YQLVRKLGRGKYSEVFEAINITNNERVVVKILKPV------KKKKIKREVKILENLRGGT 98
Query: 78 NHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSI-NYLNMNCMKDISRQILKGLYYL 136
N ++K +D TV +VFE T +FK + L ++ ++LK L Y
Sbjct: 99 N-IIKLID--TVKDPVSKTPALVFEYINNT--DFKQLYQILTDFDIRFYMYELLKALDYC 153
Query: 137 HEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYA-YKNNAFEFD-YI 194
H ++H D+K N+++ + +KL L D G A + + A E++ +
Sbjct: 154 HSKG-IMHRDVKPHNVMIDHQQ---KKLRL-----------IDWGLAEFYHPAQEYNVRV 198
Query: 195 QAREFRAAEVVLGGKL-GKPVDIWSTACITYQMVTGEYLFDPNLNDFQHIERMTEILGDI 253
+R F+ E+++ ++ +D+WS C+ M+ F +++ + R+ ++LG
Sbjct: 199 ASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGT- 257
Query: 254 PDKVCNQSR-----LKAEFYDEDGKLLSNNVEQISLTHHLQERGFSKSESLTFSDLILSM 308
+++ + L F D G+ E H + R E+L DL+ +
Sbjct: 258 -EELYGYLKKYHIDLDPHFNDILGQHSRKRWENFI---HSENRHLVSPEAL---DLLDKL 310
Query: 309 LHWDSDERFTAAQ 321
L +D +R TA +
Sbjct: 311 LRYDHQQRLTAKE 323
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 27.7 bits (60), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 88/222 (39%), Gaps = 38/222 (17%)
Query: 21 IRKLGWGFSSTVWLC----WNIETSSYVAVKVMK-GAPKFLHITRNEVQLLKITISNHHE 75
+R+LG G +V +C T VAVK ++ + L E+++LK S H
Sbjct: 18 LRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILK---SLQH- 73
Query: 76 YQNHVVKFLDHFTVLGDNGVHACIVFELAGQTLSEFKSINYLNMNCMK--DISRQILKGL 133
+++VK+ G + + F L +L E+ + ++ +K + QI KG+
Sbjct: 74 --DNIVKYKGVCYSAGRRNLKLIMEF-LPYGSLREYLQKHKERIDHIKLLQYTSQICKGM 130
Query: 134 YYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNNAFEFDY 193
YL +H DL NILV E N I D G K + +
Sbjct: 131 EYLG-TKRYIHRDLATRNILV---------------ENENRVKIGDFGLT-KVLPQDKEX 173
Query: 194 IQARE-------FRAAEVVLGGKLGKPVDIWSTACITYQMVT 228
+ +E + A E + K D+WS + Y++ T
Sbjct: 174 XKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 27.7 bits (60), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 21/106 (19%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNN 187
QI KG+ YL + LVH DL N+LV T + + I D G A
Sbjct: 127 QIAKGMNYLEDR-RLVHRDLAARNVLVKTPQHV---------------KITDFGRAKLLG 170
Query: 188 AFEFDYIQ-----AREFRAAEVVLGGKLGKPVDIWSTACITYQMVT 228
A E +Y ++ A E +L D+WS ++++T
Sbjct: 171 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 27.7 bits (60), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 21/106 (19%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNN 187
QI KG+ YL + LVH DL N+LV T + + I D G A
Sbjct: 127 QIAKGMNYLEDR-RLVHRDLAARNVLVKTPQHV---------------KITDFGRAKLLG 170
Query: 188 AFEFDYIQ-----AREFRAAEVVLGGKLGKPVDIWSTACITYQMVT 228
A E +Y ++ A E +L D+WS ++++T
Sbjct: 171 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 27.7 bits (60), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 21/106 (19%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNN 187
QI KG+ YL + LVH DL N+LV T + + I D G A
Sbjct: 119 QIAKGMNYLEDR-RLVHRDLAARNVLVKTPQHV---------------KITDFGLAKLLG 162
Query: 188 AFEFDYIQ-----AREFRAAEVVLGGKLGKPVDIWSTACITYQMVT 228
A E +Y ++ A E +L D+WS ++++T
Sbjct: 163 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 27.7 bits (60), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 21/106 (19%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNN 187
QI KG+ YL + LVH DL N+LV T + + I D G A
Sbjct: 131 QIAKGMNYLEDR-RLVHRDLAARNVLVKTPQHV---------------KITDFGLAKLLG 174
Query: 188 AFEFDYIQ-----AREFRAAEVVLGGKLGKPVDIWSTACITYQMVT 228
A E +Y ++ A E +L D+WS ++++T
Sbjct: 175 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 27.7 bits (60), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 21/106 (19%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNN 187
QI KG+ YL + LVH DL N+LV T + + I D G A
Sbjct: 125 QIAKGMNYLEDR-RLVHRDLAARNVLVKTPQHV---------------KITDFGLAKLLG 168
Query: 188 AFEFDYIQ-----AREFRAAEVVLGGKLGKPVDIWSTACITYQMVT 228
A E +Y ++ A E +L D+WS ++++T
Sbjct: 169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 27.7 bits (60), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 21/106 (19%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNN 187
QI KG+ YL + LVH DL N+LV T + + I D G A
Sbjct: 129 QIAKGMNYLEDR-RLVHRDLAARNVLVKTPQHV---------------KITDFGLAKLLG 172
Query: 188 AFEFDYIQ-----AREFRAAEVVLGGKLGKPVDIWSTACITYQMVT 228
A E +Y ++ A E +L D+WS ++++T
Sbjct: 173 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 27.7 bits (60), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 21/106 (19%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNN 187
QI KG+ YL + LVH DL N+LV T + + I D G A
Sbjct: 127 QIAKGMNYLEDR-RLVHRDLAARNVLVKTPQHV---------------KITDFGRAKLLG 170
Query: 188 AFEFDYIQ-----AREFRAAEVVLGGKLGKPVDIWSTACITYQMVT 228
A E +Y ++ A E +L D+WS ++++T
Sbjct: 171 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 27.7 bits (60), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 21/106 (19%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNN 187
QI KG+ YL + LVH DL N+LV T + + I D G A
Sbjct: 135 QIAKGMNYLEDR-RLVHRDLAARNVLVKTPQHV---------------KITDFGLAKLLG 178
Query: 188 AFEFDYIQ-----AREFRAAEVVLGGKLGKPVDIWSTACITYQMVT 228
A E +Y ++ A E +L D+WS ++++T
Sbjct: 179 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 27.7 bits (60), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 21/106 (19%)
Query: 128 QILKGLYYLHEVCDLVHTDLKHDNILVLTSETLGQKLALEVYEVLNTTNIADLGYAYKNN 187
QI KG+ YL + LVH DL N+LV T + + I D G A
Sbjct: 126 QIAKGMNYLEDR-RLVHRDLAARNVLVKTPQHV---------------KITDFGLAKLLG 169
Query: 188 AFEFDYIQ-----AREFRAAEVVLGGKLGKPVDIWSTACITYQMVT 228
A E +Y ++ A E +L D+WS ++++T
Sbjct: 170 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 215
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.137 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,673,195
Number of Sequences: 62578
Number of extensions: 392999
Number of successful extensions: 2260
Number of sequences better than 100.0: 733
Number of HSP's better than 100.0 without gapping: 323
Number of HSP's successfully gapped in prelim test: 410
Number of HSP's that attempted gapping in prelim test: 1263
Number of HSP's gapped (non-prelim): 761
length of query: 321
length of database: 14,973,337
effective HSP length: 99
effective length of query: 222
effective length of database: 8,778,115
effective search space: 1948741530
effective search space used: 1948741530
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)