BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11122
(212 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3TUF7|YETS2_MOUSE YEATS domain-containing protein 2 OS=Mus musculus GN=Yeats2 PE=2
SV=2
Length = 1407
Score = 87.8 bits (216), Expect = 5e-17, Method: Composition-based stats.
Identities = 43/103 (41%), Positives = 63/103 (61%), Gaps = 2/103 (1%)
Query: 106 QSTHKWTVYVRNCESNPENIVRHIAHVKFMLHESYAPNNVVIVRKAPFKITREGWGEFPM 165
QSTHKW VYVR P +I + V F LH SY PN++V VR+ PF +TR GWGEFP+
Sbjct: 230 QSTHKWMVYVRGSRREP-SINHFVKKVWFFLHPSYKPNDLVEVREPPFHLTRRGWGEFPV 288
Query: 166 KITIGFVDRENNRNVELVHPVNFLHVKSIIPIISLETPIDVML 208
++ + F D +N R ++++H + + + + ET +DV L
Sbjct: 289 RVQVHFKDSQNKR-IDIIHNLKLDRTYTGLQTLGAETVVDVEL 330
>sp|Q9ULM3|YETS2_HUMAN YEATS domain-containing protein 2 OS=Homo sapiens GN=YEATS2 PE=1
SV=2
Length = 1422
Score = 87.4 bits (215), Expect = 6e-17, Method: Composition-based stats.
Identities = 43/103 (41%), Positives = 63/103 (61%), Gaps = 2/103 (1%)
Query: 106 QSTHKWTVYVRNCESNPENIVRHIAHVKFMLHESYAPNNVVIVRKAPFKITREGWGEFPM 165
QSTHKW VYVR P +I + V F LH SY PN++V VR+ PF +TR GWGEFP+
Sbjct: 229 QSTHKWMVYVRGSRREP-SINHFVKKVWFFLHPSYKPNDLVEVREPPFHLTRRGWGEFPV 287
Query: 166 KITIGFVDRENNRNVELVHPVNFLHVKSIIPIISLETPIDVML 208
++ + F D +N R ++++H + + + + ET +DV L
Sbjct: 288 RVQVHFKDSQNKR-IDIIHNLKLDRTYTGLQTLGAETVVDVEL 329
>sp|Q755P0|AF9_ASHGO Protein AF-9 homolog OS=Ashbya gossypii (strain ATCC 10895 / CBS
109.51 / FGSC 9923 / NRRL Y-1056) GN=YAF9 PE=3 SV=1
Length = 208
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 7/96 (7%)
Query: 93 GTMCKSLGS--PACGQS--THKWTVYVRNCESNPENIVRHIAHVKFMLHESYAPNNVVIV 148
G K +G PA S TH WT++VR + E+I I V F LHE+Y PN V +V
Sbjct: 21 GNTAKKMGDVRPAIAPSEHTHMWTIFVRGPQG--EDISYFIKKVVFKLHETY-PNPVRVV 77
Query: 149 RKAPFKITREGWGEFPMKITIGFVDRENNRNVELVH 184
PF++T GWGEF + + + FVD N + + H
Sbjct: 78 DAPPFELTETGWGEFEINVKVHFVDEANEKMLNFYH 113
>sp|Q6CIV8|AF9_KLULA Protein AF-9 homolog OS=Kluyveromyces lactis (strain ATCC 8585 /
CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
GN=YAF9 PE=3 SV=1
Length = 220
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 57/114 (50%), Gaps = 13/114 (11%)
Query: 93 GTMCKSLGSP----ACGQSTHKWTVYVRNCESNPENIVRHIAHVKFMLHESYAPNNVVIV 148
G K +G A TH WT++VR+ E+I I V F LHE+Y PN V ++
Sbjct: 22 GNTAKKMGDNIPPNAPKDHTHLWTIFVRDPRG--EDISYFIKKVVFKLHETY-PNPVRVI 78
Query: 149 RKAPFKITREGWGEFPMKITIGFVDRENNRNVELVHPVNFLHVKSIIPIISLET 202
PF++T GWGEF + I I F D N + +NF H + P I+ ET
Sbjct: 79 EAPPFELTETGWGEFEINIKIYFADVSNEKM------LNFYHHLRLHPYINPET 126
>sp|Q6FXM4|AF9_CANGA Protein AF-9 homolog OS=Candida glabrata (strain ATCC 2001 / CBS
138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=YAF9 PE=3
SV=1
Length = 221
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 13/124 (10%)
Query: 93 GTMCKSLGSP----ACGQSTHKWTVYVRNCESNPENIVRHIAHVKFMLHESYAPNNVVIV 148
G K +G A + TH WT++VR+ + +I I V F LHE+Y PN V +
Sbjct: 21 GNTAKKIGENRPPNAPSEHTHLWTIFVRSPTGD--DISYFIKKVVFKLHETY-PNPVRTI 77
Query: 149 RKAPFKITREGWGEFPMKITIGFVDRENNRNVELVHPVNFLHVKSIIPIISLETPIDVML 208
PF++T GWGEF + I I FV+ N + +NF H + P +++ P+ +
Sbjct: 78 EAPPFELTETGWGEFDINIKIYFVEESNEKF------INFYHRLRLHPYVNVNPPMSTEV 131
Query: 209 SLSE 212
E
Sbjct: 132 KKEE 135
>sp|P53930|AF9_YEAST Protein AF-9 homolog OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YAF9 PE=1 SV=1
Length = 226
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 52/96 (54%), Gaps = 7/96 (7%)
Query: 93 GTMCKSLGS----PACGQSTHKWTVYVRNCESNPENIVRHIAHVKFMLHESYAPNNVVIV 148
G K +GS A + TH WT++VR ++ E+I I V F LH++Y PN V +
Sbjct: 21 GNTAKKMGSVKPPNAPAEHTHLWTIFVRGPQN--EDISYFIKKVVFKLHDTY-PNPVRSI 77
Query: 149 RKAPFKITREGWGEFPMKITIGFVDRENNRNVELVH 184
PF++T GWGEF + I + FV+ N + + H
Sbjct: 78 EAPPFELTETGWGEFDINIKVYFVEEANEKVLNFYH 113
>sp|Q4WPM8|AF9_ASPFU Protein AF-9 homolog OS=Neosartorya fumigata (strain ATCC MYA-4609
/ Af293 / CBS 101355 / FGSC A1100) GN=yaf9 PE=3 SV=2
Length = 252
Score = 61.2 bits (147), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 108 THKWTVYVRNCESNPENIVRHIAHVKFMLHESYAPNNVVIVRKAPFKITREGWGEFPMKI 167
TH+W V+V+ N E+I + V+F LHE+YA NV + + PF++T GWGEF ++I
Sbjct: 42 THQWRVFVKGV--NDEDISYWLKKVQFKLHETYA-QNVRTIEQPPFEVTETGWGEFEIQI 98
Query: 168 TIGFVDRENNRNVELVH 184
+ FV + L H
Sbjct: 99 KLYFVPESGEKPQTLWH 115
>sp|Q5BC71|AF9_EMENI Protein AF-9 homolog OS=Emericella nidulans (strain FGSC A4 / ATCC
38163 / CBS 112.46 / NRRL 194 / M139) GN=yaf9 PE=3 SV=1
Length = 275
Score = 61.2 bits (147), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 108 THKWTVYVRNCESNPENIVRHIAHVKFMLHESYAPNNVVIVRKAPFKITREGWGEFPMKI 167
TH+W VYVR N E+I I V+F LHE+Y NV V P+++T GWGEF ++I
Sbjct: 42 THQWRVYVRGV--NGEDISYWIKKVQFKLHETYV-QNVRTVEHPPYEVTETGWGEFEIQI 98
Query: 168 TIGFVDRENNRNVELVH 184
I FV + L H
Sbjct: 99 KIYFVPESMEKPQTLWH 115
>sp|P0CM08|AF9_CRYNJ Protein AF-9 homolog OS=Cryptococcus neoformans var. neoformans
serotype D (strain JEC21 / ATCC MYA-565) GN=YAF9 PE=3
SV=1
Length = 392
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 23/119 (19%)
Query: 103 ACGQSTHKWTVYVRNCESNP-------------------ENIVRHIAHVKFMLHESYAPN 143
A THKWTV++ + S P +++ I V F LHE+YA
Sbjct: 32 APAGHTHKWTVFLNSAASPPLKQGEPPDYEDIDYLPGGADDLSYFIRKVTFKLHETYATP 91
Query: 144 NVVIVRKAPFKITREGWGEFPMKITIGFVDRENNRNVELVHPVNFLHVKSII---PIIS 199
N VI K P++++ GWGEF ++I I + + + + L H + H + + P++S
Sbjct: 92 NRVI-DKPPYRVSETGWGEFTVQIRIQLIPESSEKPLGLQHNIKLHHWGAPVEPLPVVS 149
>sp|P0CM09|AF9_CRYNB Protein AF-9 homolog OS=Cryptococcus neoformans var. neoformans
serotype D (strain B-3501A) GN=YAF9 PE=3 SV=1
Length = 392
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 23/119 (19%)
Query: 103 ACGQSTHKWTVYVRNCESNP-------------------ENIVRHIAHVKFMLHESYAPN 143
A THKWTV++ + S P +++ I V F LHE+YA
Sbjct: 32 APAGHTHKWTVFLNSAASPPLKQGEPPDYEDIDYLPGGADDLSYFIRKVTFKLHETYATP 91
Query: 144 NVVIVRKAPFKITREGWGEFPMKITIGFVDRENNRNVELVHPVNFLHVKSII---PIIS 199
N VI K P++++ GWGEF ++I I + + + + L H + H + + P++S
Sbjct: 92 NRVI-DKPPYRVSETGWGEFTVQIRIQLIPESSEKPLGLQHNIKLHHWGAPVEPLPVVS 149
>sp|Q9CR11|YETS4_MOUSE YEATS domain-containing protein 4 OS=Mus musculus GN=Yeats4 PE=2
SV=1
Length = 227
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 65/130 (50%), Gaps = 19/130 (14%)
Query: 70 KKVPRLVPDTG---------RPLTQRNFRFYVGTMCKSLGSPACGQSTHKWTVYVRNCES 120
K++ PD+G +P+ N Y G + G TH+WTVYV+ +
Sbjct: 3 KRMAEFGPDSGGRVKGVTIVKPIVYGNVARYFGKKREEDGH------THQWTVYVKPYRN 56
Query: 121 NPENIVRHIAHVKFMLHESYAPNNVVIVRKAPFKITREGWGEFPMKITIGFVDRENNRNV 180
E++ ++ ++F LHESY N + +V K P++IT GWGEF + I I F+D N R V
Sbjct: 57 --EDMSAYVKKIQFKLHESYG-NPLRVVTKPPYEITETGWGEFEIIIKIFFID-PNERPV 112
Query: 181 ELVHPVNFLH 190
L H +
Sbjct: 113 TLYHLLKLFQ 122
>sp|O95619|YETS4_HUMAN YEATS domain-containing protein 4 OS=Homo sapiens GN=YEATS4 PE=1
SV=1
Length = 227
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 65/130 (50%), Gaps = 19/130 (14%)
Query: 70 KKVPRLVPDTG---------RPLTQRNFRFYVGTMCKSLGSPACGQSTHKWTVYVRNCES 120
K++ PD+G +P+ N Y G + G TH+WTVYV+ +
Sbjct: 3 KRMAEFGPDSGGRVKGVTIVKPIVYGNVARYFGKKREEDGH------THQWTVYVKPYRN 56
Query: 121 NPENIVRHIAHVKFMLHESYAPNNVVIVRKAPFKITREGWGEFPMKITIGFVDRENNRNV 180
E++ ++ ++F LHESY N + +V K P++IT GWGEF + I I F+D N R V
Sbjct: 57 --EDMSAYVKKIQFKLHESYG-NPLRVVTKPPYEITETGWGEFEIIIKIFFID-PNERPV 112
Query: 181 ELVHPVNFLH 190
L H +
Sbjct: 113 TLYHLLKLFQ 122
>sp|Q4PFI5|AF9_USTMA Protein AF-9 homolog OS=Ustilago maydis (strain 521 / FGSC 9021)
GN=YAF9 PE=3 SV=1
Length = 431
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 121 NPENIVRHIAHVKFMLHESYAPNNVVIVRKAPFKITREGWGEFPMKITIGFVDRENNRNV 180
N ++I I V+F LHE+Y+ V K PF IT GWGEF ++I I FV N + +
Sbjct: 115 NKDDISHFIKRVQFKLHETYS-QPTRNVDKFPFHITETGWGEFEIQIKIFFVAEANEKPL 173
Query: 181 ELVH 184
L H
Sbjct: 174 TLFH 177
>sp|Q4I7S1|AF9_GIBZE Protein AF-9 homolog OS=Gibberella zeae (strain PH-1 / ATCC
MYA-4620 / FGSC 9075 / NRRL 31084) GN=YAF9 PE=3 SV=1
Length = 268
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 50/111 (45%), Gaps = 12/111 (10%)
Query: 83 LTQRNFRFYVGTMCKSLGS----PAC--GQSTHKWTVYVRNCESNPENIVRHIAHVKFML 136
LTQ F VG+ K PA TH W V+V+ + +I + V+F L
Sbjct: 13 LTQVRRPFIVGSTAKPFSDTNPRPAGIPDNHTHSWQVFVKGLDDT--DITYWLRRVQFKL 70
Query: 137 HESYAPNNVVIVRK---APFKITREGWGEFPMKITIGFVDRENNRNVELVH 184
HES PN V +V PF + GWGEF + I + +V+ + L H
Sbjct: 71 HES-IPNYVRMVEGEPGKPFTVEETGWGEFDITIKLYYVNDSGEKPQTLYH 120
>sp|Q7RZK7|AF9_NEUCR Protein AF-9 homolog OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=yaf-9
PE=3 SV=1
Length = 309
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 6/80 (7%)
Query: 108 THKWTVYVRNCESNPENIVRHIAHVKFMLHESYAPNNVVIV---RKAPFKITREGWGEFP 164
TH WTV+++ + +I + V+F LHES PN+V +V + PF+I GWGEF
Sbjct: 43 THSWTVFIKGIDDV--DITYWLRRVQFKLHESI-PNHVRMVEGVKGQPFQIHETGWGEFE 99
Query: 165 MKITIGFVDRENNRNVELVH 184
+ + + +V + + L H
Sbjct: 100 ITMKLYYVPESSEKPQTLYH 119
>sp|Q10319|AF9_SCHPO Protein AF-9 homolog OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=yaf9 PE=3 SV=1
Length = 217
Score = 48.1 bits (113), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 15/112 (13%)
Query: 73 PRLVPDTGRPLTQRNFRFYVGTMCKSLGSPACGQSTHKWTVYVRNCESNPENIVRHIAHV 132
P LV + +PLT K A TH W ++V + E+I + + V
Sbjct: 15 PILVGNDAKPLT------------KEEKEKAPTDHTHTWRIFVEGVDG--EDISKWVRKV 60
Query: 133 KFMLHESYAPNNVVIVRKAPFKITREGWGEFPMKITIGFVDRENNRNVELVH 184
F LH++Y N + PF++ GWGEF + + I F + + + H
Sbjct: 61 VFKLHDTYN-NPTRTIESPPFEVIETGWGEFDIMVRIFFAPEAHEKALTFYH 111
>sp|Q03111|ENL_HUMAN Protein ENL OS=Homo sapiens GN=MLLT1 PE=1 SV=2
Length = 559
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 4/112 (3%)
Query: 89 RFYVGTMCKSLGSPACGQSTHKWTVYVRNCESNPENIVRHIAHVKFMLHESYAPNNVVIV 148
R +G + P TH W V+VR E +I + V F LH+S+ P +
Sbjct: 10 RLELGHRAQLRKKPTTEGFTHDWMVFVRGPEQC--DIQHFVEKVVFWLHDSF-PKPRRVC 66
Query: 149 RKAPFKITREGWGEFPMKITIGFVDRENNRNVELVHPVNFLHVKSIIPIISL 200
++ P+K+ G+ F M I + F ++E R V + + FL+++ P+ L
Sbjct: 67 KEPPYKVEESGYAGFIMPIEVHFKNKEEPRKVCFTYDL-FLNLEGNPPVNHL 117
>sp|Q6CF24|AF9_YARLI Protein AF-9 homolog OS=Yarrowia lipolytica (strain CLIB 122 / E
150) GN=YAF9 PE=3 SV=1
Length = 202
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 103 ACGQSTHKWTVYVRNCESNPENIVRHIAHVKFMLHESYAPNNVVIVRKAPFKITREGWGE 162
A G S + E+N E + I V F LH++YA N+ + + PF++T GWGE
Sbjct: 2 AAGASLKRIKEASPTPETNHE--LGFIKKVVFKLHDTYA-NSTRTIEEPPFEVTETGWGE 58
Query: 163 FPMKITIGFVDRENNRNVELVH 184
F + I I F +N+ L H
Sbjct: 59 FEISIRIFFPTEMGEKNILLYH 80
>sp|Q59LC9|AF9_CANAL Protein AF-9 homolog OS=Candida albicans (strain SC5314 / ATCC
MYA-2876) GN=YAF9 PE=3 SV=1
Length = 254
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 106 QSTHKWTVYVRNCESNPENIVRHIAHVKFMLHESYAPNNVVIVRKAPFKITREGWGEFPM 165
+ TH+WTV+ + + ++ I V F LHE+Y N V + P+++T GWGEF +
Sbjct: 39 EHTHEWTVFFKPVLGDI-DLTPLIKKVTFKLHETYE-NPVRTLESPPYQVTETGWGEFEI 96
Query: 166 KITIGF 171
I + F
Sbjct: 97 IIKLHF 102
>sp|O94436|TAF14_SCHPO Transcription initiation factor TFIID subunit 14
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=tfg3 PE=1 SV=1
Length = 241
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 123 ENIVRHIAHVKFMLHESYAPNNVVIVRKAPFKITREGWGEFPMKITIGFVDR 174
E + V + LH ++ N +RK PF+I +GWGEF M+I I + D+
Sbjct: 48 ETDASFVDRVTYKLHPTFQ-NPTRTIRKPPFQIKEQGWGEFEMEIIIYYADK 98
>sp|P35189|TAF14_YEAST Transcription initiation factor TFIID subunit 14 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=TAF14 PE=1
SV=1
Length = 244
Score = 40.0 bits (92), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 110 KWTVYVRNCESNPENIVRHI-AHVKFMLHESYA-PNNVVIVRKAPFKITREGWGEFPMKI 167
+W++ + + + I I V + LH ++A PN PF+I +GWG FP+ I
Sbjct: 31 QWSIEIVLLDDEGKEIPATIFDKVIYHLHPTFANPNRTFT--DPPFRIEEQGWGGFPLDI 88
Query: 168 TIGFVDRENNRNVELVHPVNFLH 190
++ +++ R + H +NFL
Sbjct: 89 SVFLLEKAGERKIP--HDLNFLQ 109
>sp|A7HJQ1|MURB_FERNB UDP-N-acetylenolpyruvoylglucosamine reductase OS=Fervidobacterium
nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=murB
PE=3 SV=1
Length = 309
Score = 33.9 bits (76), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 60 LELPSRKSKRKKVPRLVPDTGRPLTQRNFRFYVGTMCKSLG----SPACGQSTHKWTVYV 115
L L + K + +K P P G + FYVGT +SLG S Q + K ++
Sbjct: 212 LMLETMKKRYEKQPLEFPSAGSVFKRPRPDFYVGTAIESLGLKGFSIGGAQISEKHAGFI 271
Query: 116 RN-CESNPENIVRHIAHVKFMLHESY 140
N + E++++ I +VK + E Y
Sbjct: 272 INKGGAKAEDVLKLIEYVKDKVREKY 297
>sp|P11171|41_HUMAN Protein 4.1 OS=Homo sapiens GN=EPB41 PE=1 SV=4
Length = 864
Score = 32.0 bits (71), Expect = 3.0, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 30/56 (53%)
Query: 42 AEEEMREDGGVEVKVEPGLELPSRKSKRKKVPRLVPDTGRPLTQRNFRFYVGTMCK 97
A+EE+RED E+K GLE S+ +++ P+ +T +Q+ R + CK
Sbjct: 158 AQEELREDPDFEIKEGEGLEECSKIEVKEESPQSKAETELKASQKPIRKHRNMHCK 213
>sp|F4JIF5|TCX2_ARATH Protein tesmin/TSO1-like CXC 2 OS=Arabidopsis thaliana GN=TCX2 PE=1
SV=1
Length = 674
Score = 31.6 bits (70), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 10/76 (13%)
Query: 7 LNETLRLFRALKRSVVTQYYAT-------NRSNRRVHPAIVKAEEEMREDGGVEVKVEPG 59
LN L + K +V Y + RS + ++ + E E+RED +V VEP
Sbjct: 291 LNAILMSSKDCKTNVTQDYSCSANIQVGLQRSISTLQDSLDQTENEIREDADQDVPVEPA 350
Query: 60 LE---LPSRKSKRKKV 72
L+ L S K KR K+
Sbjct: 351 LQELNLSSPKKKRVKL 366
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,765,829
Number of Sequences: 539616
Number of extensions: 3200597
Number of successful extensions: 7585
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 7547
Number of HSP's gapped (non-prelim): 27
length of query: 212
length of database: 191,569,459
effective HSP length: 112
effective length of query: 100
effective length of database: 131,132,467
effective search space: 13113246700
effective search space used: 13113246700
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)