Query psy11123
Match_columns 285
No_of_seqs 153 out of 395
Neff 4.4
Searched_HMMs 13730
Date Fri Aug 16 18:36:43 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11123.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/11123hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2uyza1 d.20.1.1 (A:3-158) Ubi 43.0 19 0.0014 27.6 5.6 47 134-182 20-66 (156)
2 d1urfa_ a.2.6.1 (A:) Protein k 41.1 37 0.0027 24.0 6.4 45 19-64 6-67 (81)
3 d1fzya_ d.20.1.1 (A:) Ubiquiti 37.3 38 0.0028 25.3 6.4 33 148-182 29-61 (149)
4 d2f4za1 d.20.1.1 (A:32-192) Hy 35.1 37 0.0027 26.1 6.2 33 148-182 41-73 (161)
5 d1jatb_ d.20.1.1 (B:) Ubiquiti 34.7 49 0.0036 24.9 6.7 34 147-182 34-67 (136)
6 d2e2ca_ d.20.1.1 (A:) Ubiquiti 33.1 44 0.0032 25.5 6.3 47 148-196 36-83 (156)
7 d1e43a1 b.71.1.1 (A:394-483) B 31.7 5.7 0.00041 29.2 0.5 14 194-207 66-79 (90)
8 d2d3na1 b.71.1.1 (A:399-485) B 29.5 6.5 0.00047 28.7 0.5 13 195-207 64-76 (87)
9 d1pzva_ d.20.1.1 (A:) Ubiquiti 28.0 51 0.0037 24.9 5.8 33 148-182 28-60 (161)
10 d1ud2a1 b.71.1.1 (A:391-480) B 27.2 7.6 0.00055 28.5 0.5 12 196-207 68-79 (90)
11 d1ayza_ d.20.1.1 (A:) Ubiquiti 25.5 68 0.0049 23.7 6.1 47 148-196 30-77 (153)
12 d2bepa1 d.20.1.1 (A:1-154) Ubi 24.9 82 0.0059 23.6 6.5 33 148-182 34-66 (154)
13 d2awfa1 d.20.1.1 (A:7-131) Ubi 24.5 84 0.0061 22.7 6.3 33 148-182 27-59 (125)
14 d2fo3a1 d.20.1.1 (A:9-117) Put 23.8 80 0.0058 22.4 5.9 33 148-182 25-57 (109)
15 d2ucza_ d.20.1.1 (A:) Ubiquiti 23.1 84 0.0061 23.6 6.3 33 148-182 31-63 (164)
16 d1zdna1 d.20.1.1 (A:6-156) Ubi 23.1 85 0.0062 23.5 6.2 33 148-182 33-65 (151)
17 d1yrva1 d.20.1.1 (A:1-148) Ubi 22.5 82 0.006 23.6 6.0 33 148-182 31-63 (148)
18 d1z3da1 d.20.1.1 (A:2-150) Ubi 20.3 99 0.0072 22.8 6.1 47 148-196 30-77 (149)
19 d1j7db_ d.20.1.1 (B:) Ubiquiti 20.0 1.1E+02 0.0083 22.5 6.4 33 148-182 29-61 (149)
No 1
>d2uyza1 d.20.1.1 (A:3-158) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), ubc9 [TaxId: 9606]}
Probab=43.04 E-value=19 Score=27.60 Aligned_cols=47 Identities=11% Similarity=0.320 Sum_probs=31.8
Q ss_pred ECccccccCCCCCCCCceeEEEEEEcCCCCCccccceeeeEEEEeCCCC
Q psy11123 134 VGTMCKALGSPACGQSTHKWTVYVRNCESNPESIVRHIAHVKFMLHESY 182 (285)
Q Consensus 134 iGn~a~~l~~~~~~~~THkWtVYVR~~~~e~edls~~IkKVtF~LHpSF 182 (285)
.|-.+.......+..+..+|.+.+.|+.|.+ -..-+=++.+.+.+.|
T Consensus 20 ~g~~~~p~~~~~~~~n~~~W~~~i~gp~gtp--Y~gg~f~~~i~fp~~Y 66 (156)
T d2uyza1 20 FGFVAVPTKNPDGTMNLMNWECAIPGKKGTP--WEGGLFKLRMLFKDDY 66 (156)
T ss_dssp TTCEEEEEECTTSCEEEEEEEEEEECCTTST--TTTCEEEEEEECCTTT
T ss_pred CCeEEEecCCCCCCCcccEEEEEEEcCCCCC--ccCCEEEEEEeCCccc
Confidence 3555555544445567999999999998764 2222337888888888
No 2
>d1urfa_ a.2.6.1 (A:) Protein kinase c-like 1, pkn/prk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.09 E-value=37 Score=23.96 Aligned_cols=45 Identities=11% Similarity=0.140 Sum_probs=33.2
Q ss_pred hHHHHHHHHHHHHHHHHHhhh-----------------hhHHHHHHHHHHHHHHHHHhhhhhh
Q psy11123 19 DESKVRDYLLREISTETAFLE-----------------SQAVRLSDELNETLRLFRALKRSVV 64 (285)
Q Consensus 19 ~~~ki~~ii~~ef~~E~~~ke-----------------~e~~~Id~rl~~~~~~l~~Lr~~iv 64 (285)
+..+|. .|+.+++.|+..|+ +-+.+.+++|..+.+-|+.||..|.
T Consensus 6 ~~~rl~-~L~~~L~iE~kvkeGaEnm~k~~~~~~~~DrK~l~eaq~~l~eS~~Ki~lLr~~L~ 67 (81)
T d1urfa_ 6 NLSRVA-GLEKQLAIELKVKQGAENMIQTYSNGSTKDRKLLLTAQQMLQDSKTKIDIIRMQLR 67 (81)
T ss_dssp TCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHH-HHHHHHHHHHHHHHHHHHHHHHHccCCcccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334554 45888888887665 4567788888899999999997764
No 3
>d1fzya_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Baker's yeast (Saccharomyces cerevisiae), ubc1 [TaxId: 4932]}
Probab=37.26 E-value=38 Score=25.34 Aligned_cols=33 Identities=12% Similarity=0.026 Sum_probs=26.3
Q ss_pred CCceeEEEEEEcCCCCCccccceeeeEEEEeCCCC
Q psy11123 148 QSTHKWTVYVRNCESNPESIVRHIAHVKFMLHESY 182 (285)
Q Consensus 148 ~~THkWtVYVR~~~~e~edls~~IkKVtF~LHpSF 182 (285)
+..++|.+.+.|+.+.+ -..-+=++.+.+.+.|
T Consensus 29 ~~~~~w~~~I~gp~~t~--y~gg~f~~~i~fp~~Y 61 (149)
T d1fzya_ 29 SDIHHLKGTFLGPPGTP--YEGGKFVVDIEVPMEY 61 (149)
T ss_dssp SCSSEEEEEEECCTTST--TTTCEEEEEEECCTTT
T ss_pred CchhEEEEEEEcCCCCC--CCCCceeEEEEecCCc
Confidence 46899999999988764 3445558999999999
No 4
>d2f4za1 d.20.1.1 (A:32-192) Hypothetical protein Tgtwinscan_2721, E2 domain {Toxoplasma gondii [TaxId: 5811]}
Probab=35.14 E-value=37 Score=26.09 Aligned_cols=33 Identities=12% Similarity=0.340 Sum_probs=25.0
Q ss_pred CCceeEEEEEEcCCCCCccccceeeeEEEEeCCCC
Q psy11123 148 QSTHKWTVYVRNCESNPESIVRHIAHVKFMLHESY 182 (285)
Q Consensus 148 ~~THkWtVYVR~~~~e~edls~~IkKVtF~LHpSF 182 (285)
++.++|.+.+.|+.+.+ -..-+=++.+.+.+.|
T Consensus 41 ~nl~~W~~~I~Gp~~Tp--Y~gg~f~~~i~fp~~Y 73 (161)
T d2f4za1 41 GDIHRWRGFIAGPLGTP--YEGGHFTLDIVIPPDY 73 (161)
T ss_dssp TEEEEEEEEEECCTTST--TTTCEEEEEEECCTTT
T ss_pred CccceeEEEEeCCCCCc--cCCCEEEEEEeccCCC
Confidence 46899999999998765 2222338888889999
No 5
>d1jatb_ d.20.1.1 (B:) Ubiquitin conjugating enzyme, UBC {Baker's yeast (Saccharomyces cerevisiae), mms2 [TaxId: 4932]}
Probab=34.71 E-value=49 Score=24.85 Aligned_cols=34 Identities=12% Similarity=0.126 Sum_probs=26.1
Q ss_pred CCCceeEEEEEEcCCCCCccccceeeeEEEEeCCCC
Q psy11123 147 GQSTHKWTVYVRNCESNPESIVRHIAHVKFMLHESY 182 (285)
Q Consensus 147 ~~~THkWtVYVR~~~~e~edls~~IkKVtF~LHpSF 182 (285)
+...++|.+.+.|+.+.+ -..-+=++.+.+-+.|
T Consensus 34 d~~l~~W~~~i~Gp~~tp--y~gg~f~~~i~fp~~Y 67 (136)
T d1jatb_ 34 DITMTKWNGTILGPPHSN--HENRIYSLSIDCGPNY 67 (136)
T ss_dssp CTTCCEEEEEEECCSSST--TTTCEEEEEEECCTTT
T ss_pred CCceeEEEEEEECCCCCh--hhcCEEEEEEEecCCC
Confidence 457999999999988764 2333447889999999
No 6
>d2e2ca_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Clam (Spisula solidissima), E-2C [TaxId: 6584]}
Probab=33.13 E-value=44 Score=25.45 Aligned_cols=47 Identities=11% Similarity=0.159 Sum_probs=32.0
Q ss_pred CCceeEEEEEEcCCCCCccccceeeeEEEEeCCCCC-CCceeEeecCCeE
Q psy11123 148 QSTHKWTVYVRNCESNPESIVRHIAHVKFMLHESYA-PNNVVIVRKAPFK 196 (285)
Q Consensus 148 ~~THkWtVYVR~~~~e~edls~~IkKVtF~LHpSF~-pnp~rvV~~PPFe 196 (285)
++.+.|.+.+.|+.+.+ -..-+=++.+.+-+.|- ..|.+.+..++|+
T Consensus 36 ~dl~~W~~~i~Gp~~t~--yegg~f~~~i~fp~~YP~~pP~v~f~t~i~H 83 (156)
T d2e2ca_ 36 DNLFKWVATLDGPKDTV--YESLKYKLTLEFPSDYPYKPPVVKFTTPCWH 83 (156)
T ss_dssp SCTTEEEEEEECCTTST--TTTCEEEEEEECCTTTTSSCCEEEESSCCCB
T ss_pred CcccEEEEEEEcCCccc--cCCCEEEEEEEecCCCCCCCceeeccccCcC
Confidence 46899999999988764 33334478888889983 2344445555554
No 7
>d1e43a1 b.71.1.1 (A:394-483) Bacterial alpha-Amylase {Bacillus licheniformis [TaxId: 1402]}
Probab=31.73 E-value=5.7 Score=29.23 Aligned_cols=14 Identities=57% Similarity=1.246 Sum_probs=11.6
Q ss_pred CeEEEeeeeeeEEE
Q psy11123 194 PFKITREGWGEFPM 207 (285)
Q Consensus 194 PFeVtE~GWGEF~I 207 (285)
+=.|.+.|||+|.+
T Consensus 66 ~V~id~~G~g~F~v 79 (90)
T d1e43a1 66 PVVINSEGWGEFHV 79 (90)
T ss_dssp CEECCTTSEEEEEE
T ss_pred EEEECCCceEEEEE
Confidence 44577999999987
No 8
>d2d3na1 b.71.1.1 (A:399-485) Bacterial alpha-Amylase {Bacillus sp. 707 [TaxId: 1416]}
Probab=29.52 E-value=6.5 Score=28.73 Aligned_cols=13 Identities=38% Similarity=1.130 Sum_probs=10.8
Q ss_pred eEEEeeeeeeEEE
Q psy11123 195 FKITREGWGEFPM 207 (285)
Q Consensus 195 FeVtE~GWGEF~I 207 (285)
=.|.+.|||+|++
T Consensus 64 V~id~~G~g~F~v 76 (87)
T d2d3na1 64 VTINADGWGNFSV 76 (87)
T ss_dssp EECCTTSEEEEEE
T ss_pred EEECCCceEEEEE
Confidence 3467999999997
No 9
>d1pzva_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Nematode (Caenorhabditis elegans), E2-19 kDa [TaxId: 6239]}
Probab=27.97 E-value=51 Score=24.92 Aligned_cols=33 Identities=15% Similarity=0.168 Sum_probs=25.3
Q ss_pred CCceeEEEEEEcCCCCCccccceeeeEEEEeCCCC
Q psy11123 148 QSTHKWTVYVRNCESNPESIVRHIAHVKFMLHESY 182 (285)
Q Consensus 148 ~~THkWtVYVR~~~~e~edls~~IkKVtF~LHpSF 182 (285)
...+.|.+-+.|+.+.+ -..-+=++.+.+.+.|
T Consensus 28 ~dl~~W~~~i~gp~~tp--Y~gg~f~~~i~fp~~Y 60 (161)
T d1pzva_ 28 NDIYKWEVLVIGPPDTL--YEGGFFKAILDFPRDY 60 (161)
T ss_dssp TCTTEEEEEEECCTTSS--CSSCEEEEEEECCTTG
T ss_pred CCceEEEEEEECCcchh--hcCCEEEEEEeCCCCC
Confidence 35789999999987764 3345667888888888
No 10
>d1ud2a1 b.71.1.1 (A:391-480) Bacterial alpha-Amylase {Bacillus sp., ksm-k38 [TaxId: 1409]}
Probab=27.15 E-value=7.6 Score=28.52 Aligned_cols=12 Identities=50% Similarity=1.107 Sum_probs=10.4
Q ss_pred EEEeeeeeeEEE
Q psy11123 196 KITREGWGEFPM 207 (285)
Q Consensus 196 eVtE~GWGEF~I 207 (285)
.|.+.|||+|++
T Consensus 68 ~id~~G~g~F~V 79 (90)
T d1ud2a1 68 TINGDGWGEFFT 79 (90)
T ss_dssp ECCTTSEEEEEE
T ss_pred EECCCceEEEEE
Confidence 467999999998
No 11
>d1ayza_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Baker's yeast (Saccharomyces cerevisiae), ubc2 (RAD6) [TaxId: 4932]}
Probab=25.54 E-value=68 Score=23.75 Aligned_cols=47 Identities=13% Similarity=0.197 Sum_probs=32.0
Q ss_pred CCceeEEEEEEcCCCCCccccceeeeEEEEeCCCCC-CCceeEeecCCeE
Q psy11123 148 QSTHKWTVYVRNCESNPESIVRHIAHVKFMLHESYA-PNNVVIVRKAPFK 196 (285)
Q Consensus 148 ~~THkWtVYVR~~~~e~edls~~IkKVtF~LHpSF~-pnp~rvV~~PPFe 196 (285)
++...|.+.+.|+.+.+ -..-+=++.+.+.++|- ..|.+.+..+.|+
T Consensus 30 ~n~~~w~~~i~gp~~tp--y~gg~f~~~i~~p~~YP~~pP~v~f~t~i~H 77 (153)
T d1ayza_ 30 DNVMVWNAMIIGPADTP--YEDGTFRLLLEFDEEYPNKPPHVKFLSEMFH 77 (153)
T ss_dssp TEEEEEEEEEECCTTST--TTTCEEEEEEECCTTTTTSCCEEEESSCCCC
T ss_pred CcHHhHhheeeCCCCCc--cCCCEEEEEEecCccccCCCCeeeeccCCCc
Confidence 46899999999988765 22333488888899973 2345555555554
No 12
>d2bepa1 d.20.1.1 (A:1-154) Ubiquitin-conjugating enzyme E2-25 kDa, E2 domain {Cow (Bos taurus) [TaxId: 9913]}
Probab=24.93 E-value=82 Score=23.55 Aligned_cols=33 Identities=9% Similarity=0.114 Sum_probs=24.9
Q ss_pred CCceeEEEEEEcCCCCCccccceeeeEEEEeCCCC
Q psy11123 148 QSTHKWTVYVRNCESNPESIVRHIAHVKFMLHESY 182 (285)
Q Consensus 148 ~~THkWtVYVR~~~~e~edls~~IkKVtF~LHpSF 182 (285)
.+..+|.+-+.|+.+.| -..-+=++.+.+.+.|
T Consensus 34 ~n~~~w~~~i~gp~~tp--y~gg~f~~~i~fp~~Y 66 (154)
T d2bepa1 34 ENFTELRGEIAGPPDTP--YEGGRYQLEIKIPETY 66 (154)
T ss_dssp SSSSEEEEEEECCTTST--TTTCEEEEEEECCTTT
T ss_pred CChhheEeeEecCcccc--ccCCeeEEEEeccccc
Confidence 45789999999988764 2233348899999999
No 13
>d2awfa1 d.20.1.1 (A:7-131) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 G1 [TaxId: 9606]}
Probab=24.50 E-value=84 Score=22.68 Aligned_cols=33 Identities=9% Similarity=0.234 Sum_probs=25.1
Q ss_pred CCceeEEEEEEcCCCCCccccceeeeEEEEeCCCC
Q psy11123 148 QSTHKWTVYVRNCESNPESIVRHIAHVKFMLHESY 182 (285)
Q Consensus 148 ~~THkWtVYVR~~~~e~edls~~IkKVtF~LHpSF 182 (285)
...++|.+-+.|+.+.+ -..-+=++.|.+.+.|
T Consensus 27 ~dl~~w~~~i~Gp~~tp--yegg~f~~~i~fp~~Y 59 (125)
T d2awfa1 27 NDLYRWEVLIIGPPDTL--YEGGVFKAHLTFPKDY 59 (125)
T ss_dssp TCTTEEEEEEECCTTST--TTTCEEEEEEECCTTT
T ss_pred CCceEEEEEEeCCCCcc--cCCCeeEEEEecCCCc
Confidence 35888999999988764 3345557788888888
No 14
>d2fo3a1 d.20.1.1 (A:9-117) Putative ubiquitin-conjugating enzyme, E2 domain {Plasmodium chabaudi [TaxId: 5825]}
Probab=23.85 E-value=80 Score=22.40 Aligned_cols=33 Identities=15% Similarity=0.351 Sum_probs=23.2
Q ss_pred CCceeEEEEEEcCCCCCccccceeeeEEEEeCCCC
Q psy11123 148 QSTHKWTVYVRNCESNPESIVRHIAHVKFMLHESY 182 (285)
Q Consensus 148 ~~THkWtVYVR~~~~e~edls~~IkKVtF~LHpSF 182 (285)
+..++|.+.+.|+.+.+ -..-+=++.+.+-+.|
T Consensus 25 ~~~~~w~~~i~gp~~tp--y~gg~f~~~i~fp~~Y 57 (109)
T d2fo3a1 25 NNIRIWIVKYVGLENTI--YANEVYKLKIIFPDDY 57 (109)
T ss_dssp TCTTEEEEEEECCTTST--TTTCEEEEEEECCTTT
T ss_pred CcccEEEEEEecCchhh--hcCCCceEEEEecccc
Confidence 35789999999988764 2233335677777777
No 15
>d2ucza_ d.20.1.1 (A:) Ubiquitin conjugating enzyme, UBC {Baker's yeast (Saccharomyces cerevisiae), ubc7 [TaxId: 4932]}
Probab=23.11 E-value=84 Score=23.62 Aligned_cols=33 Identities=12% Similarity=0.369 Sum_probs=24.4
Q ss_pred CCceeEEEEEEcCCCCCccccceeeeEEEEeCCCC
Q psy11123 148 QSTHKWTVYVRNCESNPESIVRHIAHVKFMLHESY 182 (285)
Q Consensus 148 ~~THkWtVYVR~~~~e~edls~~IkKVtF~LHpSF 182 (285)
++...|.+.+.|+.+.+ -..-+=++.+.+.|.|
T Consensus 31 ~nl~~w~~~I~Gp~~tp--y~gg~f~~~i~fp~~Y 63 (164)
T d2ucza_ 31 NNIFIWDCLIQGPPDTP--YADGVFNAKLEFPKDY 63 (164)
T ss_dssp SCCSEEEEEEECCTTST--TTTCEEEEEEECCTTT
T ss_pred cchhhhheeeeCCCccc--ccCCeeEEEEecCCCC
Confidence 45789999999988764 2333447778888999
No 16
>d1zdna1 d.20.1.1 (A:6-156) Ubiquitin conjugating enzyme, UBC {Human(Homo sapiens), E2 S [TaxId: 9606]}
Probab=23.07 E-value=85 Score=23.51 Aligned_cols=33 Identities=15% Similarity=0.324 Sum_probs=24.8
Q ss_pred CCceeEEEEEEcCCCCCccccceeeeEEEEeCCCC
Q psy11123 148 QSTHKWTVYVRNCESNPESIVRHIAHVKFMLHESY 182 (285)
Q Consensus 148 ~~THkWtVYVR~~~~e~edls~~IkKVtF~LHpSF 182 (285)
+...+|.+.+.|+.+.+ -..-+=++.+.+-++|
T Consensus 33 ~dl~~w~~~i~gp~~tp--y~gg~f~~~i~fp~~Y 65 (151)
T d1zdna1 33 EDLTDLQVTIEGPEGTP--YAGGLFRMKLLLGKDF 65 (151)
T ss_dssp SCTTEEEEEEECCTTST--TTTCEEEEEEECCTTT
T ss_pred cchheeEEEEecCCCcC--ccCCceeeeeecCCCC
Confidence 35788999999988764 3344556788888888
No 17
>d1yrva1 d.20.1.1 (A:1-148) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), E2 U [TaxId: 9606]}
Probab=22.54 E-value=82 Score=23.62 Aligned_cols=33 Identities=9% Similarity=0.281 Sum_probs=25.0
Q ss_pred CCceeEEEEEEcCCCCCccccceeeeEEEEeCCCC
Q psy11123 148 QSTHKWTVYVRNCESNPESIVRHIAHVKFMLHESY 182 (285)
Q Consensus 148 ~~THkWtVYVR~~~~e~edls~~IkKVtF~LHpSF 182 (285)
++.+.|.+.+.|+.+.+ ...-+=++.+.+.++|
T Consensus 31 ~n~~~W~~~i~Gp~~t~--yegg~f~~~i~fp~~Y 63 (148)
T d1yrva1 31 EDMMEWEVEIEGLQNSV--WQGLVFQLTIHFTSEY 63 (148)
T ss_dssp TTSCEEEEEEECCTTST--TTTCEEEEEEECCTTB
T ss_pred CcccEEEEEEEeCCCCc--cCCCceEEEEEecccc
Confidence 36899999999987764 2233338888889999
No 18
>d1z3da1 d.20.1.1 (A:2-150) Ubiquitin conjugating enzyme, UBC {Nematode (Caenorhabditis elegans), E2-21.5 kDa [TaxId: 6239]}
Probab=20.29 E-value=99 Score=22.84 Aligned_cols=47 Identities=13% Similarity=0.230 Sum_probs=31.7
Q ss_pred CCceeEEEEEEcCCCCCccccceeeeEEEEeCCCCC-CCceeEeecCCeE
Q psy11123 148 QSTHKWTVYVRNCESNPESIVRHIAHVKFMLHESYA-PNNVVIVRKAPFK 196 (285)
Q Consensus 148 ~~THkWtVYVR~~~~e~edls~~IkKVtF~LHpSF~-pnp~rvV~~PPFe 196 (285)
++...|.+.+.|+.+.+ -..-+=++.+.+.+.|- ..|.+.+..+.|+
T Consensus 30 ~n~~~w~~~i~gp~~tp--y~gg~f~~~i~~p~~YP~~pP~v~f~t~i~H 77 (149)
T d1z3da1 30 DNILTWEAIIFGPQETP--FEDGTFKLSLEFTEEYPNKPPTVKFISKMFH 77 (149)
T ss_dssp TEEEEEEEEEECCTTST--TTTCEEEEEEECCTTTTTSCCEEEESSCCCC
T ss_pred CchhhhceeEECCCCcc--ccCCEEEEEEEecCcCCCCCcEEEecCcccc
Confidence 46899999999998764 33334589999999993 1234444455443
No 19
>d1j7db_ d.20.1.1 (B:) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), ubc13 [TaxId: 9606]}
Probab=20.02 E-value=1.1e+02 Score=22.52 Aligned_cols=33 Identities=15% Similarity=0.323 Sum_probs=24.5
Q ss_pred CCceeEEEEEEcCCCCCccccceeeeEEEEeCCCC
Q psy11123 148 QSTHKWTVYVRNCESNPESIVRHIAHVKFMLHESY 182 (285)
Q Consensus 148 ~~THkWtVYVR~~~~e~edls~~IkKVtF~LHpSF 182 (285)
++...|.+.+.|+.+.+ -..-+=++.+.+.+.|
T Consensus 29 ~n~~~w~~~i~gp~~tp--y~gg~f~~~i~fp~~Y 61 (149)
T d1j7db_ 29 SNARYFHVVIAGPQDSP--FEGGTFKLELFLPEEY 61 (149)
T ss_dssp SCTTEEEEEEECCTTST--TTTCEEEEEEECCTTT
T ss_pred CcccEeeeEEECCcccc--cCCCEEEEEEecCCcc
Confidence 45788999999987764 2223338888888888
Done!