RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy11123
         (285 letters)



>d2grea2 c.56.5.4 (A:3-73,A:187-348) Deblocking aminopeptidase
          YhfE {Bacillus cereus [TaxId: 1396]}
          Length = 233

 Score = 25.7 bits (56), Expect = 6.9
 Identities = 4/22 (18%), Positives = 14/22 (63%)

Query: 9  DVTTHPSPTLDESKVRDYLLRE 30
          ++ + PSP+ + +K+ +++   
Sbjct: 12 ELVSIPSPSGNTAKIINFIENY 33


>d2fvga2 c.56.5.4 (A:1-64,A:149-339) Endoglucanase TM1049
          {Thermotoga maritima [TaxId: 2336]}
          Length = 255

 Score = 25.3 bits (54), Expect = 9.9
 Identities = 8/24 (33%), Positives = 15/24 (62%)

Query: 9  DVTTHPSPTLDESKVRDYLLREIS 32
          +++  P  + DE KVRD++  +I 
Sbjct: 5  ELSMMPGVSGDEGKVRDFIKSKIE 28


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.318    0.134    0.385 

Gapped
Lambda     K      H
   0.267   0.0660    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,051,110
Number of extensions: 48726
Number of successful extensions: 120
Number of sequences better than 10.0: 1
Number of HSP's gapped: 120
Number of HSP's successfully gapped: 7
Length of query: 285
Length of database: 2,407,596
Length adjustment: 84
Effective length of query: 201
Effective length of database: 1,254,276
Effective search space: 252109476
Effective search space used: 252109476
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.0 bits)