Query psy11131
Match_columns 150
No_of_seqs 135 out of 1322
Neff 11.6
Searched_HMMs 29240
Date Fri Aug 16 18:48:42 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11131.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11131hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2iep_A Muscle-specific kinase 99.9 1.1E-21 3.8E-26 120.7 15.5 132 9-143 52-192 (192)
2 3kld_A Contactin 4, axcam, BIG 99.9 6.1E-22 2.1E-26 134.0 14.6 121 17-141 258-383 (384)
3 3jz7_A MCAR, CAR, coxsackievir 99.9 7.4E-22 2.5E-26 123.2 12.6 122 17-142 84-213 (214)
4 2v5m_A Dscam; neurobiology SPL 99.9 4.3E-21 1.5E-25 129.6 16.8 126 8-139 261-387 (388)
5 2yd6_A PTPRD protein; hydrolas 99.9 6.8E-21 2.3E-25 119.2 15.9 127 17-146 63-209 (212)
6 3b43_A Titin; I-SET IG fold, e 99.9 5.1E-21 1.7E-25 135.3 16.2 125 17-145 347-480 (570)
7 2rik_A Titin; I-SET IG fold, p 99.9 1.1E-20 3.8E-25 122.7 16.6 120 17-140 155-283 (284)
8 3laf_A Deleted in colorectal c 99.9 4.8E-21 1.6E-25 129.8 15.3 130 10-143 267-403 (403)
9 2r15_A Myomesin-1; sarcomeric 99.9 1.3E-20 4.4E-25 117.6 16.0 133 6-142 44-211 (212)
10 2wv3_A Neuroplastin; igcam, me 99.9 1.6E-20 5.5E-25 115.5 16.0 119 17-140 56-189 (190)
11 2yd1_A Tyrosine-protein phosph 99.9 1.1E-20 3.7E-25 118.2 15.4 133 8-143 50-202 (212)
12 3r4d_A CEA-related cell adhesi 99.9 1E-20 3.6E-25 117.7 14.9 132 9-145 62-204 (208)
13 2v44_A NCAM2, neural cell adhe 99.9 2.6E-20 8.8E-25 114.4 16.2 131 6-139 43-187 (189)
14 2a38_A Titin; Z1Z2, structural 99.9 1.7E-20 5.8E-25 115.6 15.2 120 17-140 63-194 (194)
15 1f97_A Junction adhesion molec 99.9 1.3E-20 4.3E-25 117.5 14.4 132 7-141 55-207 (212)
16 4fa8_A Secreted protein BARF1; 99.9 1.6E-21 5.6E-26 121.5 10.1 109 17-128 69-190 (203)
17 3sgj_C Human FCG3A receptor; r 99.9 6.3E-21 2.2E-25 118.9 12.3 123 17-145 54-178 (204)
18 2j8h_A Titin, connectin; cardi 99.9 2.2E-20 7.7E-25 115.3 14.7 120 18-141 63-197 (197)
19 2c5d_C AXL oncogene, tyrosine- 99.9 4.9E-20 1.7E-24 113.7 15.7 118 17-139 68-191 (195)
20 2rik_A Titin; I-SET IG fold, p 99.9 1.6E-19 5.6E-24 117.2 18.9 126 17-146 61-196 (284)
21 3p3y_A Neurofascin; IG domains 99.9 2.5E-20 8.4E-25 126.3 15.4 121 17-141 275-403 (404)
22 3rbs_A Myomesin-1; immunoglobu 99.9 4.5E-20 1.5E-24 115.3 14.9 115 18-139 62-205 (207)
23 3b43_A Titin; I-SET IG fold, e 99.9 2.6E-20 8.8E-25 131.7 15.5 132 5-140 424-569 (570)
24 2jll_A NCAM2, neural cell adhe 99.9 6.8E-20 2.3E-24 123.7 16.8 132 9-144 51-197 (389)
25 3lcy_A Titin; A-BAND, IG tande 99.9 8.3E-20 2.8E-24 112.6 15.8 131 7-141 49-196 (197)
26 1rhf_A Tyrosine-protein kinase 99.9 5.1E-20 1.7E-24 112.5 14.7 119 17-140 60-182 (182)
27 3ejj_X Macrophage colony-stimu 99.9 6.2E-20 2.1E-24 119.4 16.0 138 6-147 132-287 (289)
28 3k0w_A Mucosa-associated lymph 99.9 4.3E-20 1.5E-24 116.1 14.7 122 17-142 65-203 (218)
29 2v5t_A NCAM2, N-CAM 2, neural 99.9 7.5E-20 2.6E-24 112.2 15.1 129 8-140 47-187 (189)
30 1epf_A NCAM, protein (neural c 99.9 5.9E-20 2E-24 112.9 14.5 109 17-128 62-179 (191)
31 2wim_A N-CAM 2, NCAM2, neural 99.9 2.9E-20 1E-24 121.1 13.8 136 9-148 144-291 (291)
32 1cs6_A Axonin-1; neural cell a 99.9 4.1E-20 1.4E-24 124.6 15.0 120 17-140 257-381 (382)
33 1f2q_A High affinity immunoglo 99.9 3.3E-20 1.1E-24 113.0 13.1 123 17-145 51-175 (176)
34 2va4_A NCAM2, N-CAM 2, neural 99.8 2.2E-19 7.4E-24 110.3 16.4 130 6-140 45-192 (192)
35 4fqp_A Poliovirus receptor; im 99.8 5.8E-20 2E-24 121.0 14.8 129 17-149 177-312 (313)
36 3grw_A Fibroblast growth facto 99.8 1.2E-19 4.2E-24 115.2 15.6 125 17-145 72-222 (241)
37 1fnl_A Low affinity immunoglob 99.8 4.1E-20 1.4E-24 112.5 12.3 121 17-142 54-175 (175)
38 1nbq_A JAM, junctional adhesio 99.8 2.3E-20 8E-25 116.0 11.4 130 8-140 59-208 (209)
39 2x1w_L Vascular endothelial gr 99.8 2E-19 6.7E-24 112.7 15.2 135 8-144 54-210 (213)
40 3qs7_E FL cytokine receptor; i 99.8 5E-20 1.7E-24 126.2 13.4 124 17-147 290-420 (423)
41 1bih_A Hemolin; insect immunit 99.8 1.3E-19 4.4E-24 122.5 14.5 118 18-139 271-394 (395)
42 3ojm_B Fibroblast growth facto 99.8 2.2E-19 7.7E-24 113.2 14.6 126 17-146 76-226 (231)
43 3s97_C Contactin-1; carbonic a 99.8 5.3E-19 1.8E-23 109.3 15.4 120 17-140 66-200 (201)
44 2ec8_A MAST/stem cell growth f 99.8 1.6E-19 5.6E-24 126.3 14.6 126 17-146 273-416 (524)
45 1hng_A CD2; T lymphocyte adhes 99.8 7.9E-20 2.7E-24 111.5 11.3 119 7-137 50-172 (176)
46 2v9r_A Roundabout homolog 1; p 99.8 4.9E-20 1.7E-24 114.9 10.4 125 19-146 74-207 (212)
47 2o26_X MAST/stem cell growth f 99.8 2.1E-19 7.3E-24 117.1 13.0 134 6-143 133-290 (290)
48 2nzi_A Titin; IG-domain, FNIII 99.8 5.3E-19 1.8E-23 115.9 14.9 123 18-144 63-200 (305)
49 3qs9_E FL cytokine receptor; i 99.8 1.2E-19 4E-24 127.3 12.5 123 17-146 290-419 (527)
50 2y25_A Myomesin; structural pr 99.8 7E-19 2.4E-23 115.7 15.4 121 18-142 165-316 (317)
51 1qz1_A Neural cell adhesion mo 99.8 8.9E-19 3E-23 114.0 15.6 126 17-145 62-197 (291)
52 1ry7_B FGFR-3, fibroblast grow 99.8 5.5E-19 1.9E-23 117.2 14.3 126 17-146 180-332 (334)
53 1qz1_A Neural cell adhesion mo 99.8 9.3E-19 3.2E-23 113.9 15.0 129 9-141 146-290 (291)
54 2yd9_A Receptor-type tyrosine- 99.8 8.1E-19 2.8E-23 115.1 13.5 123 17-145 164-295 (304)
55 4dep_C Interleukin-1 receptor 99.8 1E-18 3.4E-23 116.6 14.1 132 8-142 70-218 (349)
56 2wim_A N-CAM 2, NCAM2, neural 99.8 2E-18 6.9E-23 112.3 15.0 136 7-145 46-195 (291)
57 1vca_A VCAM-D1,2, human vascul 99.8 2.1E-19 7.2E-24 111.8 9.9 126 17-145 54-201 (202)
58 1ugn_A LIR1, leukocyte immunog 99.8 1.5E-18 5.3E-23 107.4 13.7 120 17-140 58-197 (198)
59 1uct_A Immunoglobulin alpha FC 99.8 6.2E-19 2.1E-23 110.9 11.9 123 18-144 65-201 (218)
60 3p2t_A Leukocyte immunoglobuli 99.8 3.8E-19 1.3E-23 110.0 10.8 120 17-140 58-195 (196)
61 2ny1_B T-cell surface glycopro 99.8 9.2E-19 3.1E-23 107.2 12.0 115 17-145 68-183 (184)
62 3sbw_C Programmed cell death 1 99.8 1.2E-18 4.1E-23 109.4 12.7 121 18-143 81-213 (222)
63 1itb_B Type 1 interleukin-1 re 99.8 6.6E-18 2.3E-22 111.1 16.8 128 10-141 155-314 (315)
64 3bp6_B Programmed cell death 1 99.8 1.6E-18 5.6E-23 107.5 13.1 121 17-142 67-194 (202)
65 2fbo_J V1V2;, variable region- 99.8 1.7E-18 5.8E-23 110.4 13.5 118 9-129 79-238 (250)
66 4dkd_C Macrophage colony-stimu 99.8 1.6E-18 5.5E-23 112.9 13.1 134 7-143 133-283 (292)
67 2yd9_A Receptor-type tyrosine- 99.8 2.6E-18 8.8E-23 112.7 14.0 120 17-139 63-199 (304)
68 4fom_A Poliovirus receptor-rel 99.8 2.6E-19 9.1E-24 117.5 9.1 128 17-148 172-307 (308)
69 3oq3_B IFN-alpha/beta binding 99.8 1.8E-17 6.2E-22 109.9 18.0 130 8-139 173-328 (329)
70 2ifg_A High affinity nerve gro 99.8 1.9E-19 6.6E-24 120.3 8.1 119 17-143 212-347 (347)
71 1oll_A NK receptor; immune sys 99.8 1.3E-18 4.4E-23 107.0 11.0 120 17-140 57-187 (188)
72 3ry4_A Low affinity immunoglob 99.8 2.2E-18 7.5E-23 104.1 11.6 118 17-140 51-170 (170)
73 3u83_A Poliovirus receptor-rel 99.8 7.2E-19 2.5E-23 116.4 10.2 124 17-144 194-323 (331)
74 3mj6_A Junctional adhesion mol 99.8 1.1E-17 3.9E-22 107.7 15.5 119 17-144 84-240 (268)
75 2vr9_A Roundabout 1, ROBO; imm 99.8 1.8E-18 6.1E-23 108.3 11.4 119 20-141 72-207 (217)
76 1ry7_B FGFR-3, fibroblast grow 99.8 4.5E-19 1.5E-23 117.6 9.1 131 7-142 51-217 (334)
77 2ocw_A Polymeric-immunoglobuli 99.8 1.1E-17 3.8E-22 118.3 16.4 134 9-143 392-548 (585)
78 3dmk_A DOWN syndrome cell adhe 99.8 2.5E-18 8.7E-23 125.7 13.3 124 17-144 677-812 (816)
79 1e07_A Carcinoembryonic antige 99.8 7.5E-18 2.6E-22 120.4 15.4 129 5-140 506-639 (642)
80 2gi7_A GPVI protein; IG-like d 99.8 1.3E-18 4.3E-23 106.7 9.8 120 16-139 51-183 (184)
81 4f80_A Butyrophilin subfamily 99.8 4.7E-18 1.6E-22 107.2 12.6 120 17-142 83-214 (226)
82 4dep_C Interleukin-1 receptor 99.8 7.4E-19 2.5E-23 117.2 9.0 131 10-144 170-336 (349)
83 3laf_A Deleted in colorectal c 99.8 1.2E-17 4.2E-22 113.1 14.9 132 10-145 169-315 (403)
84 3kld_A Contactin 4, axcam, BIG 99.8 3.1E-17 1E-21 111.0 16.4 125 17-145 157-298 (384)
85 3o4o_C Interleukin-1 receptor 99.8 4E-18 1.4E-22 113.3 11.7 131 9-142 73-221 (339)
86 2ocw_A Polymeric-immunoglobuli 99.8 1.6E-17 5.4E-22 117.5 15.4 125 18-145 76-225 (585)
87 4i0k_A CD276 antigen; immunogl 99.8 2.4E-18 8.3E-23 108.1 10.0 122 17-144 72-209 (222)
88 3dmk_A DOWN syndrome cell adhe 99.8 1.6E-17 5.4E-22 121.6 15.4 126 9-140 298-424 (816)
89 3pv7_A B7-H6, IG-like domain-c 99.8 1E-17 3.5E-22 107.0 12.4 121 17-141 82-226 (248)
90 1hnf_A CD2; T lymphocyte adhes 99.8 3.9E-17 1.3E-21 100.0 14.5 118 8-137 56-177 (182)
91 1nqb_A Single-chain antibody f 99.8 2.2E-17 7.6E-22 106.1 14.0 133 9-144 65-236 (256)
92 2d3v_A Leukocyte immunoglobuli 99.8 3.4E-18 1.1E-22 105.8 9.7 108 17-128 58-180 (196)
93 2if7_A SLAM family member 6; N 99.8 4.2E-17 1.4E-21 100.7 14.4 116 10-134 62-185 (193)
94 2pet_A Lutheran blood group gl 99.8 5.6E-18 1.9E-22 106.8 10.7 123 14-139 73-229 (231)
95 1p6f_A NKP46, natural cytotoxi 99.8 8.4E-18 2.9E-22 107.3 11.2 123 17-143 60-193 (242)
96 1jbj_A CD3 epsilon and gamma e 99.8 1.1E-18 3.7E-23 107.3 6.7 107 17-128 44-177 (186)
97 3mj8_L Stimulatory hamster ant 99.8 2E-18 6.7E-23 107.9 8.0 121 10-134 59-206 (213)
98 3umt_A SCFV heavy chain and li 99.8 2.2E-17 7.7E-22 106.0 13.1 133 9-144 67-248 (256)
99 2ec8_A MAST/stem cell growth f 99.8 2.5E-17 8.6E-22 115.2 14.2 136 6-145 156-313 (524)
100 3uzq_A Anti-dengue MAB 4E11; d 99.8 3E-17 1E-21 105.2 13.4 135 10-147 67-250 (253)
101 2o26_X MAST/stem cell growth f 99.8 2.5E-17 8.6E-22 107.3 13.3 118 17-140 57-182 (290)
102 3b5h_A Cervical EMMPRIN, HAB18 99.8 8.2E-17 2.8E-21 98.4 14.6 116 18-141 52-183 (184)
103 2zg1_A Sialic acid-binding IG- 99.8 4.6E-17 1.6E-21 101.6 13.5 124 9-138 68-212 (214)
104 4frw_A Poliovirus receptor-rel 99.8 2.1E-17 7.2E-22 103.0 11.5 120 17-140 79-210 (218)
105 3rjd_A High affinity immunoglo 99.8 2.4E-17 8.1E-22 105.7 11.9 119 17-139 131-260 (262)
106 3ejj_X Macrophage colony-stimu 99.7 3E-17 1E-21 106.7 11.9 122 17-141 51-181 (289)
107 3gkz_A Anti-methamphetamine si 99.7 6.6E-17 2.3E-21 103.8 13.2 135 9-146 72-254 (257)
108 2y23_A Myomesin; structural pr 99.7 2.4E-17 8E-22 108.2 11.3 115 19-140 168-311 (312)
109 3eow_R Poliovirus receptor; im 99.7 3.1E-18 1.1E-22 107.6 6.9 120 17-143 78-212 (221)
110 3rjd_A High affinity immunoglo 99.7 4.4E-17 1.5E-21 104.5 12.3 119 17-142 48-168 (262)
111 4dkd_C Macrophage colony-stimu 99.7 5.9E-18 2E-22 110.2 8.3 124 17-141 51-181 (292)
112 3u83_A Poliovirus receptor-rel 99.7 7.9E-17 2.7E-21 106.6 13.7 134 8-145 78-234 (331)
113 3knb_B Obscurin-like protein 1 99.7 7.3E-17 2.5E-21 90.6 11.0 86 54-143 13-107 (107)
114 1cs6_A Axonin-1; neural cell a 99.7 1.9E-16 6.6E-21 106.7 15.0 133 9-145 148-297 (382)
115 3mjg_X Beta-type platelet-deri 99.7 1.3E-16 4.5E-21 103.8 13.4 115 26-144 150-281 (289)
116 1dr9_A B7-1 (CD80), T lymphocy 99.7 1.9E-16 6.5E-21 98.0 13.4 113 17-137 65-197 (201)
117 3p3y_A Neurofascin; IG domains 99.7 1.5E-16 5.1E-21 107.8 14.0 134 7-144 160-314 (404)
118 1itb_B Type 1 interleukin-1 re 99.7 1.6E-17 5.6E-22 109.3 9.0 120 7-129 52-188 (315)
119 3tv3_L PGT128 light chain, IG 99.7 7.4E-18 2.5E-22 105.2 7.0 117 10-128 57-199 (211)
120 4fom_A Poliovirus receptor-rel 99.7 7.5E-17 2.6E-21 105.9 11.9 126 17-145 74-214 (308)
121 2ghw_B Anti-SARS SCFV antibody 99.7 1.4E-16 4.8E-21 101.6 12.7 129 9-140 67-241 (247)
122 1e07_A Carcinoembryonic antige 99.7 4.1E-16 1.4E-20 111.5 16.4 131 10-144 63-204 (642)
123 1z7z_I Intercellular adhesion 99.7 1.5E-17 5.2E-22 114.3 8.6 117 17-142 327-450 (450)
124 3juy_B 3B3 single chain varian 99.7 3.5E-16 1.2E-20 100.4 14.2 116 10-128 72-244 (256)
125 3vh8_G Killer cell immunoglobu 99.7 3.3E-16 1.1E-20 103.3 14.3 121 17-141 74-215 (316)
126 2dru_A Chimera of CD48 antigen 99.7 1.9E-16 6.4E-21 96.8 12.1 107 10-128 60-169 (180)
127 1ccz_A Protein (CD58); LFA-3, 99.7 2.3E-16 8E-21 95.7 11.7 113 10-136 51-166 (171)
128 3vh8_G Killer cell immunoglobu 99.7 5.2E-17 1.8E-21 107.1 9.4 121 17-143 174-315 (316)
129 1nkr_A P58-CL42 KIR; inhibitor 99.7 3.8E-16 1.3E-20 96.9 12.8 117 17-139 63-200 (201)
130 3s96_B 3B5H10 FAB light chain; 99.7 2.4E-17 8.1E-22 103.2 7.4 116 10-128 64-208 (218)
131 3v2a_R Vascular endothelial gr 99.7 6E-19 2.1E-23 128.1 0.0 124 18-145 626-760 (772)
132 1f3r_B FV antibody fragment; I 99.7 1.3E-16 4.3E-21 102.6 10.6 131 9-143 64-247 (257)
133 3d9a_L Light chain of hyhel10 99.7 3.4E-17 1.2E-21 102.2 7.8 116 10-128 60-201 (213)
134 2y23_A Myomesin; structural pr 99.7 3.8E-16 1.3E-20 102.4 13.0 120 5-128 42-190 (312)
135 1b6u_A KIR2DL3, P58 killer cel 99.7 2.2E-16 7.4E-21 101.6 11.4 122 17-144 62-204 (257)
136 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.7 5.8E-16 2E-20 99.4 13.2 109 17-128 76-234 (256)
137 2oz4_A Intercellular adhesion 99.7 6.7E-17 2.3E-21 104.2 8.7 117 17-142 142-265 (265)
138 1wio_A CD4, T-cell surface gly 99.7 3.4E-16 1.2E-20 105.0 12.4 125 12-140 137-292 (363)
139 4fqp_A Poliovirus receptor; im 99.7 1E-16 3.4E-21 105.6 9.5 125 17-144 79-218 (313)
140 2rcj_C Light chain; immunoglob 99.7 7.5E-16 2.6E-20 107.8 14.3 123 10-136 59-209 (523)
141 4fmk_A Poliovirus receptor-rel 99.7 2.7E-16 9.1E-21 98.4 10.8 122 17-141 83-219 (225)
142 2p1y_A Bispecific alpha/beta T 99.7 1.1E-15 3.8E-20 96.9 13.7 116 9-127 60-222 (238)
143 2v5m_A Dscam; neurobiology SPL 99.7 1.6E-16 5.6E-21 107.1 10.3 133 9-145 155-310 (388)
144 3oq3_B IFN-alpha/beta binding 99.7 2.6E-16 8.9E-21 104.4 10.6 128 14-143 86-226 (329)
145 3qs9_E FL cytokine receptor; i 99.7 5.9E-16 2E-20 108.7 12.9 115 16-142 377-511 (527)
146 1lk3_L 9D7 light chain; antige 99.7 1.7E-16 5.7E-21 99.0 9.1 116 10-128 59-200 (210)
147 1mju_H Immunoglobulin MS6-12; 99.7 2.9E-16 9.9E-21 99.2 10.2 131 9-144 65-220 (227)
148 1bih_A Hemolin; insect immunit 99.7 7.8E-16 2.7E-20 104.0 12.8 132 9-145 152-311 (395)
149 3nl4_L Antigen binding fragmen 99.7 2.2E-16 7.4E-21 98.6 9.3 113 9-124 59-198 (213)
150 3qs7_E FL cytokine receptor; i 99.7 3.8E-16 1.3E-20 107.0 11.2 123 18-144 104-231 (423)
151 2xzc_L FAB A.17 light chain; i 99.7 2.8E-16 9.5E-21 98.4 9.4 117 9-128 60-203 (216)
152 2y25_A Myomesin; structural pr 99.7 1.1E-17 3.7E-22 110.0 3.1 129 7-139 49-198 (317)
153 1q9r_B S25-2 FAB (IGG1K) heavy 99.7 2.3E-16 7.9E-21 99.2 8.9 115 10-128 68-211 (222)
154 3knb_A Titin; IG-like, titin, 99.7 9E-16 3.1E-20 85.1 10.1 84 54-141 5-99 (100)
155 1c1e_H Catalytic antibody 1E9 99.7 3.1E-16 1E-20 98.4 9.2 116 9-128 65-208 (219)
156 1q0x_L FAB 9B1, light chain; a 99.7 3.6E-16 1.2E-20 97.6 9.3 117 10-128 62-203 (212)
157 1sy6_A T-cell surface glycopro 99.7 1.2E-16 4.2E-21 99.5 7.1 116 17-140 49-203 (204)
158 1wio_A CD4, T-cell surface gly 99.7 1.8E-16 6.1E-21 106.4 8.2 114 17-144 67-181 (363)
159 3auv_A SC-DSFV derived from th 99.7 2E-15 6.9E-20 97.9 12.9 117 9-126 70-235 (276)
160 3omz_A Human vdelta1 gamma del 99.7 3.3E-15 1.1E-19 96.0 13.6 106 17-125 79-230 (259)
161 3o4o_C Interleukin-1 receptor 99.7 3.4E-16 1.2E-20 104.0 9.1 125 10-137 171-331 (339)
162 3r06_A Anti-mouse CD3epsilon a 99.7 4E-16 1.4E-20 97.3 8.4 119 9-128 59-201 (213)
163 1qok_A MFE-23 recombinant anti 99.7 4.3E-15 1.5E-19 96.7 13.3 129 10-142 92-269 (282)
164 2j6e_L IGM, FAB light chain; a 99.7 9.7E-17 3.3E-21 101.5 5.3 117 10-128 80-223 (234)
165 3v2a_R Vascular endothelial gr 99.7 1.2E-16 3.9E-21 116.2 6.2 126 17-145 290-423 (772)
166 2rcj_C Light chain; immunoglob 99.7 1.4E-15 4.8E-20 106.4 11.4 111 17-128 281-408 (523)
167 1z7z_I Intercellular adhesion 99.7 1E-15 3.5E-20 105.2 10.6 107 17-128 50-166 (450)
168 2cqv_A MLCK, myosin light chai 99.7 7.9E-15 2.7E-19 83.1 12.5 88 54-145 7-103 (114)
169 3sob_L Antibody light chain; b 99.7 7.7E-16 2.6E-20 97.4 9.0 119 9-128 82-224 (237)
170 2fbj_H IGA-kappa J539 FAB (hea 99.6 7.4E-15 2.5E-19 92.3 13.2 117 9-129 65-210 (220)
171 3kvq_A Vascular endothelial gr 99.6 1.2E-15 4E-20 85.7 8.2 96 47-146 3-105 (108)
172 2c1o_A IGK-C protein; FAB frag 99.6 8.3E-16 2.8E-20 98.4 8.4 117 10-128 102-243 (254)
173 1nfd_E H57 FAB; complex (immun 99.6 9.7E-17 3.3E-21 100.1 3.9 117 9-128 57-200 (212)
174 2oz4_A Intercellular adhesion 99.6 6.4E-15 2.2E-19 94.9 12.3 123 15-145 54-186 (265)
175 1moe_A Anti-CEA MAB T84.66; an 99.6 6.5E-15 2.2E-19 93.5 12.1 116 9-125 63-219 (240)
176 3d9a_H Heavy chain of hyhel10 99.6 1.3E-15 4.4E-20 95.0 8.5 115 9-128 64-202 (210)
177 3fku_X Neutralizing antibody F 99.6 3.8E-15 1.3E-19 96.9 10.8 116 10-127 66-234 (280)
178 3qp3_A Titin; I-SET IG-like, s 99.6 3.3E-15 1.1E-19 83.1 9.1 87 52-142 6-101 (103)
179 2gki_A Nuclease; anti-DNA anti 99.6 6.5E-15 2.2E-19 96.3 11.9 107 17-126 101-257 (291)
180 3m8o_H Immunoglobulin A1 heavy 99.6 2.1E-14 7.1E-19 90.2 13.8 115 9-128 67-211 (221)
181 2wng_A Tyrosine-protein phosph 99.6 2.3E-15 8E-20 99.6 9.7 109 17-129 74-205 (327)
182 1pz5_B Heavy chain of FAB (SYA 99.6 2.4E-15 8.1E-20 94.4 9.2 121 9-134 67-214 (220)
183 3bae_H WO2 IGG2A FAB fragment 99.6 2.7E-15 9.1E-20 94.8 9.1 115 10-128 67-214 (228)
184 1svz_A Immunoglobulin;, single 99.6 9.2E-15 3.2E-19 93.2 11.6 117 9-126 64-228 (247)
185 3liz_H 4C3 monoclonal antibody 99.6 5.8E-15 2E-19 94.7 10.5 126 9-139 65-218 (253)
186 1dn0_B IGM-kappa cold agglutin 99.6 2.4E-14 8.1E-19 90.7 13.0 126 9-139 64-225 (232)
187 1qgc_4 Protein (immunoglobulin 99.6 2.7E-15 9.3E-20 102.7 9.2 116 10-128 64-205 (438)
188 3irg_B Obscurin-like protein 1 99.6 1.4E-14 4.6E-19 81.1 10.6 87 53-143 12-107 (107)
189 2edj_A Roundabout homolog 2; K 99.6 1.4E-14 4.7E-19 80.2 10.4 86 54-143 8-100 (100)
190 1dee_B IGM RF 2A2; FAB-IBP com 99.6 1.5E-14 5.2E-19 91.0 11.9 118 9-129 65-216 (223)
191 2znx_A SCFV; fluorotryptohpan, 99.6 9.9E-15 3.4E-19 93.0 11.1 117 9-126 59-222 (242)
192 3esu_F Antibody 14B7* light ch 99.6 1.8E-14 6.3E-19 92.0 12.3 116 9-125 62-231 (250)
193 3ux9_B SCFV antibody; five hel 99.6 6.8E-15 2.3E-19 94.3 10.3 116 10-126 63-235 (256)
194 3nl4_H Antigen binding fragmen 99.6 3E-15 1E-19 93.7 8.1 118 9-128 63-202 (215)
195 2kdg_A Myotilin; immonoglobuli 99.6 1.1E-14 3.8E-19 80.5 9.6 85 54-142 5-99 (100)
196 1g1c_A Immunoglobulin-like dom 99.6 2.9E-14 9.9E-19 78.6 11.1 84 54-141 5-98 (99)
197 3bkj_L WO2 IGG2A FAB fragment 99.6 2.5E-15 8.7E-20 96.2 7.6 116 10-128 98-239 (252)
198 2wng_A Tyrosine-protein phosph 99.6 2E-15 6.9E-20 99.9 7.1 119 17-139 180-318 (327)
199 1op3_H FAB 2G12, heavy chain; 99.6 4.3E-15 1.5E-19 93.7 8.2 115 9-128 65-213 (225)
200 2gjj_A A21 single-chain antibo 99.6 4.3E-14 1.5E-18 91.2 13.0 117 9-126 69-239 (264)
201 1fhg_A Telokin; immunoglobulin 99.6 1.2E-14 4.1E-19 86.6 9.5 94 48-145 35-138 (154)
202 1wit_A Twitchin 18TH IGSF modu 99.6 2.2E-14 7.6E-19 78.3 9.9 82 55-140 3-93 (93)
203 1u2h_A APEG-1, aortic preferen 99.6 4.4E-14 1.5E-18 77.9 10.9 84 54-141 5-98 (99)
204 1qgc_4 Protein (immunoglobulin 99.6 1.6E-15 5.6E-20 103.8 6.1 116 9-128 283-427 (438)
205 1za6_B IGG heavy chain; immuno 99.6 2.9E-15 9.9E-20 99.9 7.1 116 9-128 65-205 (344)
206 2yr3_A Myosin light chain kina 99.6 1.4E-14 4.8E-19 80.0 8.7 85 51-139 8-98 (99)
207 1hzh_H IGG, immunoglobulin hea 99.6 9.5E-15 3.3E-19 100.8 9.5 116 9-128 65-217 (457)
208 2kkq_A Myotilin; unknown funct 99.6 3.2E-14 1.1E-18 80.9 10.0 89 53-145 14-113 (116)
209 2xqy_G A13-D6.3 monoclonal ant 99.6 1.9E-14 6.5E-19 92.8 10.1 116 9-128 71-213 (261)
210 2dm3_A KIAA0992 protein, palla 99.6 1.4E-14 4.8E-19 81.5 8.3 89 54-146 9-107 (110)
211 2e7c_A Myosin-binding protein 99.6 5.1E-14 1.8E-18 80.2 10.7 79 61-143 31-117 (118)
212 3bn9_D E2 FAB heavy chain; ant 99.6 7E-15 2.4E-19 94.6 7.9 116 9-128 65-218 (257)
213 3pl6_D MBP peptide / T-cell re 99.6 9.8E-15 3.4E-19 94.2 8.4 117 10-128 88-240 (268)
214 2dm2_A Palladin; beta-sandwich 99.6 5.4E-14 1.8E-18 79.1 10.4 89 54-146 8-107 (110)
215 3bqu_C 3H6 FAB light chain; be 99.6 1E-15 3.5E-20 96.8 3.6 109 17-128 93-223 (233)
216 3bfo_A Mucosa-associated lymph 99.6 6.6E-14 2.2E-18 76.1 10.4 83 56-142 5-88 (91)
217 3puc_A Titin; I-SET IG-like do 99.6 6.8E-14 2.3E-18 77.1 10.6 84 54-141 6-98 (99)
218 1x9q_A SCFV, 4M5.3 anti-fluore 99.6 1.2E-13 4.1E-18 89.2 12.9 117 9-126 78-254 (268)
219 3qhz_H Human monoclonal antibo 99.6 4.5E-14 1.5E-18 89.3 10.2 128 10-140 70-228 (232)
220 2eo9_A Roundabout homolog 1; b 99.6 4.7E-14 1.6E-18 80.4 9.2 88 54-145 8-102 (118)
221 4ei6_B Vbeta16 XV19 type II na 99.6 3.2E-14 1.1E-18 90.6 9.3 116 10-128 64-218 (245)
222 4dzb_B Vbeta2 (MAIT T cell rec 99.6 1.3E-14 4.3E-19 92.5 7.3 116 10-128 65-219 (246)
223 3mjg_X Beta-type platelet-deri 99.5 1.2E-13 4.2E-18 89.7 11.2 118 17-141 51-178 (289)
224 1igt_B IGG2A intact antibody - 99.5 8.1E-14 2.8E-18 95.8 10.7 115 10-129 66-208 (444)
225 1hxm_B Gamma-delta T-cell rece 99.5 1.1E-13 3.6E-18 88.2 10.5 127 8-139 65-227 (242)
226 2c1o_A IGK-C protein; FAB frag 99.5 7.9E-14 2.7E-18 89.2 10.0 115 24-141 11-150 (254)
227 2yuz_A Myosin-binding protein 99.5 4.9E-14 1.7E-18 78.1 7.8 83 55-144 8-98 (100)
228 3o3u_N Maltose-binding peripla 99.5 4.9E-13 1.7E-17 94.7 14.8 116 10-128 424-565 (581)
229 3irg_A Titin; IG-like, titin, 99.5 2.3E-13 7.8E-18 75.0 10.1 83 55-141 6-99 (100)
230 1igy_B IGG1 intact antibody MA 99.5 1.8E-14 6.3E-19 98.8 6.8 117 9-129 64-204 (434)
231 1iga_A IGA1; immunoglobulin; N 99.5 5.5E-13 1.9E-17 92.5 14.2 124 9-136 66-222 (475)
232 2vol_A Murine IGG FC; FC, zinc 99.5 1.2E-14 4.2E-19 90.5 5.3 109 17-128 68-196 (207)
233 1gsm_A Madcam-1, mucosal addre 99.5 5E-13 1.7E-17 83.2 12.4 105 17-127 59-192 (210)
234 2bk8_A Connectin, M1, titin he 99.5 8.1E-13 2.8E-17 72.6 11.8 80 59-142 6-95 (97)
235 3q5y_A TCR N15 beta; IG, T cel 99.5 7.2E-14 2.5E-18 88.7 8.1 116 10-128 63-212 (240)
236 1nct_A Titin; cell adhesion, g 99.5 7.2E-14 2.5E-18 78.2 7.1 83 54-140 14-105 (106)
237 3nfj_J T cell receptor beta ch 99.5 7.2E-14 2.5E-18 89.0 7.7 117 10-128 62-218 (245)
238 3u2s_H PG9 heavy chain; greek 99.5 1.7E-13 5.7E-18 87.7 9.0 117 9-128 64-226 (248)
239 1c5d_H Monoclonal antibody aga 99.5 3.5E-13 1.2E-17 84.3 10.1 115 10-128 65-204 (215)
240 2edh_A Obscurin; structural ge 99.5 6E-13 2.1E-17 75.1 9.9 98 41-147 5-111 (113)
241 1igt_B IGG2A intact antibody - 99.5 4.8E-14 1.6E-18 96.9 6.3 110 17-129 184-330 (444)
242 4hwu_A Fibroblast growth facto 99.5 4.2E-13 1.4E-17 73.5 9.0 84 60-148 7-94 (95)
243 1gxe_A Myosin binding protein 99.5 4.1E-13 1.4E-17 78.6 9.0 76 61-140 25-138 (139)
244 3n9g_H FAB fragment of MAB CR4 99.5 7.7E-13 2.6E-17 83.6 11.0 127 9-141 65-225 (230)
245 2cr6_A KIAA1556 protein, obscu 99.5 1.3E-13 4.4E-18 78.2 6.4 93 47-147 5-108 (115)
246 2wbj_D OB TCR; transmembrane, 99.5 3.7E-13 1.3E-17 87.4 9.4 117 9-128 87-244 (279)
247 3qib_D 2B4 beta chain; IG doma 99.5 1.1E-13 3.6E-18 89.5 6.8 115 11-128 90-243 (270)
248 2wqr_A IG epsilon chain C regi 99.5 2.2E-14 7.5E-19 94.9 3.4 109 17-128 178-308 (323)
249 2cry_A KIN of IRRE-like protei 99.5 3.1E-15 1.1E-19 85.8 -0.8 96 43-143 3-115 (122)
250 2dav_A SLOW MYBP-C, myosin-bin 99.5 8.5E-13 2.9E-17 75.7 9.3 81 57-141 10-111 (126)
251 1wwb_X Protein (brain derived 99.5 6.9E-13 2.4E-17 73.8 8.8 74 67-144 14-101 (103)
252 3tv3_H PGT128 heavy chain, IG 99.5 1.7E-13 5.8E-18 87.1 7.0 116 10-128 73-225 (239)
253 1wwc_A Protein (NT-3 growth fa 99.5 3.7E-13 1.3E-17 76.6 7.6 91 48-145 2-105 (118)
254 2ckn_A Basic fibroblast growth 99.5 9.8E-13 3.4E-17 72.0 9.0 79 56-139 11-94 (95)
255 3cx2_A Myosin-binding protein 99.4 1.7E-12 5.8E-17 72.7 10.0 81 56-140 6-107 (108)
256 1he7_A High affinity nerve gro 99.4 8.4E-13 2.9E-17 75.6 8.7 74 68-145 14-103 (126)
257 3caf_A Fibroblast growth facto 99.4 8.2E-13 2.8E-17 72.9 8.5 74 62-139 16-99 (100)
258 2rgs_A I, IG gamma-2B heavy ch 99.4 1.7E-14 5.8E-19 90.6 1.8 109 17-128 76-204 (218)
259 1gl4_B Basement membrane-speci 99.4 3E-12 1E-16 70.4 10.6 76 61-140 17-97 (98)
260 2ens_A Advanced glycosylation 99.4 2.3E-13 8E-18 74.7 5.8 82 56-141 12-95 (96)
261 1waa_A Titin; metal binding pr 99.4 2.2E-12 7.4E-17 70.4 9.6 79 55-141 6-92 (93)
262 1iga_A IGA1; immunoglobulin; N 99.4 1.4E-12 4.8E-17 90.5 10.8 110 17-128 309-442 (475)
263 3m45_A Cell adhesion molecule 99.4 1E-12 3.6E-17 73.3 8.3 85 54-143 6-108 (108)
264 2edf_A Obscurin; beta-sandwich 99.4 1.4E-12 4.8E-17 72.4 8.7 85 54-146 8-100 (103)
265 2lu7_A Obscurin-like protein 1 99.4 8.4E-13 2.9E-17 70.7 7.4 72 63-142 5-84 (84)
266 3sob_H Antibody heavy chain, l 99.4 2.5E-12 8.6E-17 82.5 11.0 126 9-140 88-250 (256)
267 1ypz_F T-cell receptor gamma c 99.4 6.4E-13 2.2E-17 84.0 8.1 115 9-128 65-215 (230)
268 2v9t_A Roundabout homolog 1; s 99.4 1.5E-12 5.1E-17 73.9 8.8 88 53-143 8-111 (117)
269 3to4_D NKT vbeta2 (mouse varia 99.4 4.9E-13 1.7E-17 85.6 7.5 114 11-127 65-217 (253)
270 2cpc_A KIAA0657 protein; immun 99.4 1.4E-12 4.8E-17 73.6 8.5 76 64-147 23-106 (113)
271 1oga_E TRBC1, T-cell receptor 99.4 1.3E-12 4.5E-17 83.6 9.4 117 9-128 63-217 (252)
272 1bec_A 14.3.D T cell antigen r 99.4 8.6E-13 2.9E-17 83.8 8.4 117 9-128 59-211 (238)
273 2yuv_A Myosin-binding protein 99.4 6.7E-12 2.3E-16 69.3 10.8 83 54-144 7-98 (100)
274 2cr3_A Basic fibroblast growth 99.4 1.1E-12 3.9E-17 72.3 7.4 78 64-145 13-94 (99)
275 3so5_A LIG-3, leucine-rich rep 99.4 6.9E-12 2.4E-16 70.2 10.7 87 52-139 8-111 (112)
276 2e6p_A Obscurin-like protein 1 99.4 1.6E-12 5.4E-17 72.3 7.8 83 54-145 7-101 (104)
277 3mtr_A N-CAM-1, NCAM-1, neural 99.4 6.4E-12 2.2E-16 78.4 11.3 131 10-143 65-211 (215)
278 2wqr_A IG epsilon chain C regi 99.4 1E-13 3.4E-18 91.7 3.3 109 17-128 72-202 (323)
279 2e7b_A Obscurin; IG-like domai 99.4 3.8E-12 1.3E-16 70.6 8.8 83 55-146 9-100 (103)
280 1x44_A Myosin-binding protein 99.4 3.8E-12 1.3E-16 70.6 8.2 81 57-145 10-100 (103)
281 2edn_A Myosin-binding protein 99.4 1.3E-12 4.3E-17 74.2 6.2 82 57-142 15-117 (118)
282 2eny_A Obscurin; beta-sandwich 99.4 3E-12 1E-16 71.3 7.6 83 56-145 10-101 (104)
283 3f8u_B Tapasin; endoplasmic re 99.4 8.2E-12 2.8E-16 84.3 11.0 109 17-128 254-389 (401)
284 3mtr_A N-CAM-1, NCAM-1, neural 99.4 1.5E-11 5E-16 76.8 11.5 87 54-145 19-116 (215)
285 2j8h_A Titin, connectin; cardi 99.4 1.5E-11 5.1E-16 75.6 11.3 87 54-144 4-101 (197)
286 2dlt_A Myosin binding protein 99.4 7E-12 2.4E-16 69.9 8.7 69 54-126 8-85 (106)
287 3lcy_A Titin; A-BAND, IG tande 99.4 7.3E-12 2.5E-16 76.8 9.5 89 53-145 6-103 (197)
288 3s35_X Vascular endothelial gr 99.4 1.1E-11 3.9E-16 70.7 9.7 83 62-146 16-115 (122)
289 1i1c_A IGG2A, IG gamma-2A chai 99.4 2.7E-13 9.3E-18 86.3 2.8 109 17-128 82-210 (239)
290 2yd1_A Tyrosine-protein phosph 99.3 6.9E-11 2.4E-15 73.5 13.2 87 53-142 5-103 (212)
291 2yd6_A PTPRD protein; hydrolas 99.3 3E-11 1E-15 75.2 11.5 86 53-142 5-101 (212)
292 3iu4_H CHP3 FAB heavy chain; a 99.3 2.7E-12 9.1E-17 82.8 6.7 114 9-128 64-212 (263)
293 3qr2_A Basigin; CD147, EMMPRIN 99.3 4.8E-11 1.6E-15 69.5 11.4 75 52-129 19-115 (137)
294 2c5d_C AXL oncogene, tyrosine- 99.3 1.7E-11 5.9E-16 75.2 9.8 89 54-145 2-109 (195)
295 2dku_A KIAA1556 protein; beta- 99.3 2.5E-11 8.6E-16 67.2 9.5 84 55-146 9-100 (103)
296 1rhf_A Tyrosine-protein kinase 99.3 1.1E-11 3.7E-16 75.3 8.6 87 56-145 4-101 (182)
297 2wv3_A Neuroplastin; igcam, me 99.3 3.5E-11 1.2E-15 73.6 10.8 87 54-146 3-96 (190)
298 3mlr_H Human monoclonal anti-H 99.3 7.3E-12 2.5E-16 79.0 7.9 114 10-128 66-214 (226)
299 3rbg_A Cytotoxic and regulator 99.3 2.1E-11 7.1E-16 70.0 8.9 81 61-146 8-106 (124)
300 2dm7_A KIAA1556 protein; beta- 99.3 3.5E-11 1.2E-15 67.2 9.7 85 54-147 8-100 (108)
301 1l6x_A Immunoglobulin gamma-1 99.3 1.1E-12 3.9E-17 81.5 3.8 99 27-128 78-196 (207)
302 2lvc_A Obscurin-like protein 1 99.3 1.4E-11 4.7E-16 66.9 7.6 58 65-125 17-82 (91)
303 2iep_A Muscle-specific kinase 99.3 1.2E-11 4.1E-16 75.6 8.2 89 53-144 6-102 (192)
304 2w59_A IGY FCU3-4; immunoglobu 99.3 8.9E-13 3.1E-17 83.4 3.2 109 17-128 77-216 (231)
305 2nzi_A Titin; IG-domain, FNIII 99.3 4.7E-11 1.6E-15 78.0 11.3 87 54-144 4-101 (305)
306 1ypz_E T cell receptor delta, 99.3 1.4E-11 4.7E-16 76.7 8.3 115 9-128 56-197 (207)
307 2a38_A Titin; Z1Z2, structural 99.3 6.4E-11 2.2E-15 72.5 11.1 84 54-141 5-99 (194)
308 1iam_A ICAM-1, CD54, intercell 99.3 4.4E-11 1.5E-15 73.0 10.0 107 17-128 50-166 (185)
309 2k1m_A Myosin-binding protein 99.3 6.1E-11 2.1E-15 64.8 9.7 76 57-140 11-94 (95)
310 2aty_A Complement receptor chi 99.3 1.4E-11 4.8E-16 83.3 8.5 110 17-128 233-361 (376)
311 1z9m_A GAPA225; nectin-like, I 99.3 2.1E-11 7.3E-16 71.8 8.2 83 59-146 43-143 (145)
312 3k0w_A Mucosa-associated lymph 99.3 6.6E-11 2.3E-15 74.0 10.8 86 54-143 18-104 (218)
313 2edk_A Myosin-binding protein 99.3 7.3E-12 2.5E-16 69.3 5.3 81 55-143 9-101 (101)
314 1zvo_C Myeloma immunoglobulin 99.3 1.4E-10 4.7E-15 81.4 12.8 117 9-129 66-221 (512)
315 2va4_A NCAM2, N-CAM 2, neural 99.3 3.9E-11 1.3E-15 73.3 8.7 87 55-145 3-98 (192)
316 2v44_A NCAM2, neural cell adhe 99.3 2E-10 7E-15 70.0 11.9 84 58-145 6-99 (189)
317 1za6_B IGG heavy chain; immuno 99.3 6.2E-12 2.1E-16 83.8 5.4 109 17-128 182-329 (344)
318 1igy_B IGG1 intact antibody MA 99.3 1.7E-13 5.8E-18 94.0 -2.4 110 17-128 295-423 (434)
319 3p2t_A Leukocyte immunoglobuli 99.3 8.2E-11 2.8E-15 72.4 9.9 83 55-141 6-96 (196)
320 1epf_A NCAM, protein (neural c 99.2 1.9E-10 6.6E-15 70.2 11.2 88 56-145 4-103 (191)
321 2e6q_A Obscurin-like protein 1 99.2 4.1E-10 1.4E-14 63.3 11.1 83 55-145 9-109 (112)
322 2vr9_A Roundabout 1, ROBO; imm 99.2 7.6E-11 2.6E-15 73.5 8.7 88 53-143 8-108 (217)
323 1hzh_H IGG, immunoglobulin hea 99.2 5.4E-12 1.9E-16 87.1 3.7 109 17-128 194-338 (457)
324 1ow0_A IG alpha-1 chain C regi 99.2 1.3E-12 4.6E-17 81.7 0.6 110 17-128 66-199 (214)
325 3u1s_H FAB PGT145 heavy chain; 99.2 5E-11 1.7E-15 77.0 7.7 114 9-128 88-253 (267)
326 1vca_A VCAM-D1,2, human vascul 99.2 3.6E-10 1.2E-14 70.1 11.2 78 64-145 11-94 (202)
327 2eo1_A OBSCN protein, cDNA FLJ 99.2 1.3E-10 4.4E-15 64.2 8.2 73 63-143 20-100 (102)
328 2v5t_A NCAM2, N-CAM 2, neural 99.2 1.5E-10 5E-15 70.5 9.2 87 55-144 3-98 (189)
329 2d3v_A Leukocyte immunoglobuli 99.2 2.1E-10 7E-15 70.6 9.8 84 54-142 5-97 (196)
330 1pd6_A Cardiac MYBP-C;, myosin 99.2 1.7E-10 5.7E-15 64.2 8.5 70 63-140 25-103 (104)
331 2jll_A NCAM2, neural cell adhe 99.2 2.2E-10 7.5E-15 77.2 10.6 81 61-145 7-103 (389)
332 4hwn_A FC receptor-like A; FCR 99.2 3.8E-11 1.3E-15 67.3 5.7 80 66-145 19-103 (108)
333 3ojm_B Fibroblast growth facto 99.2 1.1E-10 3.9E-15 73.1 8.4 77 62-142 27-113 (231)
334 3zyj_A Leucine-rich repeat-con 99.2 1.5E-10 5.1E-15 79.7 9.4 89 54-146 341-438 (440)
335 3bn3_B ICAM-5, intercellular a 99.2 8.1E-11 2.8E-15 72.4 7.0 109 18-128 53-174 (196)
336 1mq8_A ICAM-1, intercellular a 99.2 1.5E-10 5.1E-15 75.6 8.5 124 18-144 51-189 (291)
337 2v9r_A Roundabout homolog 1; p 99.2 1.4E-10 4.6E-15 71.9 7.9 88 54-144 9-112 (212)
338 3bp6_B Programmed cell death 1 99.2 9E-10 3.1E-14 67.9 11.4 79 61-143 9-105 (202)
339 1f97_A Junction adhesion molec 99.2 5.8E-10 2E-14 69.0 10.6 86 57-145 4-107 (212)
340 1zvo_C Myeloma immunoglobulin 99.2 2.5E-09 8.5E-14 75.0 14.7 119 17-141 361-505 (512)
341 2v5y_A Receptor-type tyrosine- 99.2 5.1E-10 1.8E-14 81.5 11.5 124 18-145 124-264 (731)
342 2gi7_A GPVI protein; IG-like d 99.2 4.4E-10 1.5E-14 68.5 9.4 83 53-141 7-90 (184)
343 3sgj_C Human FCG3A receptor; r 99.1 1.7E-10 6E-15 71.6 7.7 83 55-145 8-92 (204)
344 2vsd_A CHIR AB1; immune system 99.1 5.9E-11 2E-15 66.1 4.9 86 55-144 6-99 (105)
345 1xau_A B- and T-lymphocyte att 99.1 5.9E-10 2E-14 61.2 8.5 76 63-141 23-116 (122)
346 3grw_A Fibroblast growth facto 99.1 4.4E-10 1.5E-14 71.0 9.2 77 61-141 22-108 (241)
347 4fa8_A Secreted protein BARF1; 99.1 1.2E-10 4E-15 72.4 6.3 76 64-143 3-107 (203)
348 2ifg_A High affinity nerve gro 99.1 2.1E-12 7.2E-17 86.3 -2.2 109 28-144 136-252 (347)
349 3qib_D 2B4 beta chain; IG doma 99.1 3.6E-10 1.2E-14 72.9 8.1 94 24-126 3-123 (270)
350 2id5_A Lingo-1, leucine rich r 99.1 2.6E-10 9.1E-15 79.1 7.9 76 61-140 392-476 (477)
351 3uto_A Twitchin; kinase, muscl 99.1 1.5E-09 5E-14 77.2 11.6 83 54-140 482-573 (573)
352 1pko_A Myelin oligodendrocyte 99.1 6.2E-09 2.1E-13 60.6 12.5 84 61-145 13-125 (139)
353 1fnl_A Low affinity immunoglob 99.1 2.3E-10 7.8E-15 69.2 6.5 82 54-143 7-90 (175)
354 1gsm_A Madcam-1, mucosal addre 99.1 2.7E-09 9.2E-14 66.4 11.4 79 64-146 17-100 (210)
355 1ugn_A LIR1, leukocyte immunog 99.1 3.7E-10 1.3E-14 69.6 7.4 83 54-141 5-97 (198)
356 2qsq_A Carcinoembryonic antige 99.1 1.2E-09 4.1E-14 61.4 8.5 75 65-142 11-110 (111)
357 4gos_A V-SET domain-containing 99.1 7.5E-10 2.6E-14 63.6 7.9 77 62-139 13-118 (125)
358 1oll_A NK receptor; immune sys 99.1 1.5E-09 5.2E-14 66.3 9.7 83 55-141 5-95 (188)
359 1nbq_A JAM, junctional adhesio 99.1 7.8E-10 2.7E-14 68.3 8.2 87 56-145 6-110 (209)
360 1uct_A Immunoglobulin alpha FC 99.1 1.1E-09 3.9E-14 68.6 8.8 84 54-141 9-102 (218)
361 1f2q_A High affinity immunoglo 99.1 1.7E-10 5.9E-15 69.8 4.9 81 53-141 3-85 (176)
362 3zyi_A Leucine-rich repeat-con 99.1 3.7E-10 1.3E-14 78.0 7.0 85 55-144 353-446 (452)
363 1hxm_A Gamma-delta T-cell rece 99.1 1.4E-09 4.6E-14 68.8 8.9 114 9-128 61-198 (229)
364 4acp_A IG gamma-1 chain C regi 99.1 7.4E-11 2.5E-15 75.1 3.1 109 17-128 89-217 (240)
365 1nkr_A P58-CL42 KIR; inhibitor 99.1 3E-09 1E-13 65.7 10.1 85 54-142 8-105 (201)
366 2aw2_A B and T lymphocyte atte 99.0 5.8E-09 2E-13 56.7 8.9 77 63-142 20-111 (120)
367 3udw_C Poliovirus receptor; PV 99.0 3.4E-09 1.2E-13 59.7 8.5 82 61-143 7-118 (118)
368 2xot_A Amphoterin-induced prot 99.0 3.6E-09 1.2E-13 71.1 9.7 78 61-142 253-338 (361)
369 4gjt_B Poliovirus receptor-rel 99.0 8.1E-09 2.8E-13 59.0 9.6 81 60-141 6-117 (123)
370 3ry4_A Low affinity immunoglob 99.0 1.8E-09 6.1E-14 64.7 7.1 81 56-143 6-87 (170)
371 3knb_B Obscurin-like protein 1 99.0 1.1E-09 3.8E-14 61.1 5.4 51 5-55 53-107 (107)
372 1jhl_L IGG1-kappa D11.15 FV (l 99.0 1.5E-08 5.2E-13 56.4 10.1 66 59-127 6-94 (108)
373 1eaj_A Coxsackie virus and ade 99.0 4.4E-09 1.5E-13 59.8 8.0 80 61-141 12-125 (126)
374 3q0h_A T cell immunoreceptor w 99.0 4.5E-09 1.6E-13 59.5 7.9 83 61-145 10-112 (117)
375 4f80_A Butyrophilin subfamily 99.0 1.4E-08 4.7E-13 63.7 10.7 78 62-140 12-118 (226)
376 3r08_E T-cell surface glycopro 99.0 8.2E-10 2.8E-14 58.4 4.2 59 61-125 6-66 (82)
377 3d9a_L Light chain of hyhel10 99.0 6.8E-09 2.3E-13 64.4 9.1 80 59-141 6-108 (213)
378 1hng_A CD2; T lymphocyte adhes 99.0 5.6E-09 1.9E-13 63.3 8.4 77 64-143 6-101 (176)
379 3shs_A HOC head outer capsid p 99.0 7.2E-08 2.5E-12 61.8 13.6 120 17-139 52-181 (304)
380 4fmk_A Poliovirus receptor-rel 98.9 7.4E-09 2.5E-13 64.3 9.0 83 61-143 8-122 (225)
381 1b6u_A KIR2DL3, P58 killer cel 98.9 1.9E-08 6.6E-13 64.6 11.0 85 54-142 7-104 (257)
382 1neu_A Myelin P0 protein; stru 98.9 1.3E-08 4.5E-13 57.9 9.2 86 60-145 5-123 (124)
383 3mj8_L Stimulatory hamster ant 98.9 4.9E-09 1.7E-13 65.0 8.0 78 59-140 6-108 (213)
384 3kgr_A LAIR-1, hlair1, leukocy 98.9 1.8E-08 6.2E-13 56.0 9.4 86 54-143 9-105 (106)
385 1p6f_A NKP46, natural cytotoxi 98.9 1.2E-08 4.1E-13 65.0 9.7 84 54-141 7-98 (242)
386 3pv7_A B7-H6, IG-like domain-c 98.9 8E-09 2.8E-13 65.6 8.9 86 60-146 9-123 (248)
387 3r06_A Anti-mouse CD3epsilon a 98.9 1.1E-08 3.6E-13 63.5 9.2 79 58-139 5-106 (213)
388 3rbs_A Myomesin-1; immunoglobu 98.9 1.6E-08 5.6E-13 62.8 9.8 60 63-125 11-82 (207)
389 3r4d_A CEA-related cell adhesi 98.9 6.5E-09 2.2E-13 64.2 7.9 77 64-143 9-110 (208)
390 2edo_A CD48 antigen; beta-sand 98.9 8.7E-09 3E-13 58.7 7.6 80 63-145 13-114 (121)
391 3nl4_L Antigen binding fragmen 98.9 1.1E-08 3.7E-13 63.5 8.5 79 58-139 5-108 (213)
392 2pet_A Lutheran blood group gl 98.9 9.9E-09 3.4E-13 64.3 8.4 81 60-144 6-117 (231)
393 1lk3_L 9D7 light chain; antige 98.9 2.1E-08 7.3E-13 62.1 9.6 78 61-141 7-107 (210)
394 1zox_A CLM-1; IG-superfamily, 98.9 2.8E-08 9.5E-13 55.8 9.1 81 60-143 7-112 (113)
395 2xot_A Amphoterin-induced prot 98.9 8E-09 2.7E-13 69.4 7.8 65 10-88 294-359 (361)
396 1jbj_A CD3 epsilon and gamma e 98.9 3.5E-09 1.2E-13 64.7 5.4 69 65-139 10-79 (186)
397 2if7_A SLAM family member 6; N 98.9 9E-09 3.1E-13 63.2 7.1 80 61-143 5-108 (193)
398 4hwu_A Fibroblast growth facto 98.9 1.3E-08 4.3E-13 55.3 7.0 51 5-55 39-89 (95)
399 3b5h_A Cervical EMMPRIN, HAB18 98.9 2.2E-08 7.5E-13 60.7 8.7 73 65-146 9-87 (184)
400 3jz7_A MCAR, CAR, coxsackievir 98.9 1.5E-08 5E-13 62.6 8.0 84 62-146 8-125 (214)
401 2r15_A Myomesin-1; sarcomeric 98.9 2.9E-08 9.8E-13 61.4 9.2 71 65-139 13-93 (212)
402 3s97_C Contactin-1; carbonic a 98.8 7.7E-09 2.6E-13 63.4 6.4 66 60-128 14-90 (201)
403 1hnf_A CD2; T lymphocyte adhes 98.8 1.9E-08 6.5E-13 61.4 7.8 78 62-142 7-105 (182)
404 2znx_A SCFV; fluorotryptohpan, 98.8 2.7E-08 9.3E-13 63.1 8.9 83 58-143 5-110 (242)
405 2x1w_L Vascular endothelial gr 98.8 7.8E-09 2.7E-13 64.4 6.0 77 62-141 15-101 (213)
406 4frw_A Poliovirus receptor-rel 98.8 3.7E-08 1.3E-12 60.8 8.9 83 60-142 5-117 (218)
407 2or8_A Hepatitis A virus cellu 98.8 1.9E-08 6.6E-13 56.6 6.7 77 61-140 4-110 (116)
408 3tv3_L PGT128 light chain, IG 98.8 3.5E-08 1.2E-12 61.1 8.4 74 63-140 9-105 (211)
409 4esk_A LAIR-1, mlair1, leukocy 98.8 1.3E-07 4.3E-12 52.2 9.6 74 64-141 18-101 (102)
410 1mq8_A ICAM-1, intercellular a 98.8 1.3E-09 4.4E-14 71.2 1.8 122 18-143 143-284 (291)
411 2fbo_J V1V2;, variable region- 98.8 8.4E-08 2.9E-12 60.7 10.2 80 60-142 8-132 (250)
412 1dr9_A B7-1 (CD80), T lymphocy 98.8 2E-08 6.8E-13 61.8 7.1 76 64-142 4-107 (201)
413 1mqk_L Antibody 7E2 FV fragmen 98.8 8.6E-08 2.9E-12 54.5 9.2 80 59-141 6-109 (120)
414 3sob_L Antibody light chain; b 98.8 6.8E-08 2.3E-12 60.7 9.5 80 57-139 27-129 (237)
415 3s96_B 3B5H10 FAB light chain; 98.8 2.5E-08 8.5E-13 62.0 7.3 80 58-141 5-116 (218)
416 2cqv_A MLCK, myosin light chai 98.8 2.3E-08 7.7E-13 56.2 6.5 51 6-56 48-102 (114)
417 3esu_F Antibody 14B7* light ch 98.8 3.7E-08 1.3E-12 62.6 8.2 82 57-141 7-111 (250)
418 3s35_X Vascular endothelial gr 98.8 7.2E-09 2.5E-13 58.9 4.4 45 17-61 74-118 (122)
419 2e27_L Anti-ciguatoxin antibod 98.8 9.7E-08 3.3E-12 54.2 8.9 65 59-126 8-95 (119)
420 2ckn_A Basic fibroblast growth 98.8 2.6E-08 8.8E-13 54.1 6.1 46 6-51 49-94 (95)
421 2zg1_A Sialic acid-binding IG- 98.8 1.8E-07 6.2E-12 57.9 10.6 80 60-142 6-123 (214)
422 1qfw_M FV, antibody (anti beta 98.8 1.3E-07 4.6E-12 52.6 9.0 65 59-126 6-93 (108)
423 2d9c_A Signal-regulatory prote 98.8 1.9E-07 6.6E-12 54.1 10.0 83 59-144 13-124 (136)
424 2q20_A VK1 O18/O8 germline lig 98.8 1.1E-07 3.8E-12 53.0 8.7 66 58-126 7-95 (109)
425 3knb_A Titin; IG-like, titin, 98.8 1.2E-08 4.2E-13 56.1 4.6 44 10-53 52-99 (100)
426 3sbw_C Programmed cell death 1 98.8 2.3E-07 7.7E-12 57.8 11.0 82 61-144 8-118 (222)
427 2cr3_A Basic fibroblast growth 98.8 3.5E-08 1.2E-12 54.0 6.5 49 6-54 43-91 (99)
428 1zxq_A ICAM-2, intercellular a 98.8 4.4E-08 1.5E-12 59.9 7.4 108 17-127 52-172 (192)
429 1q0x_L FAB 9B1, light chain; a 98.7 1.2E-07 4.1E-12 58.7 9.5 80 61-140 7-109 (212)
430 1ccz_A Protein (CD58); LFA-3, 98.7 1.7E-08 5.9E-13 60.9 5.4 75 63-143 4-96 (171)
431 2yc1_B Single chain antibody f 98.7 1E-07 3.5E-12 56.0 8.5 85 57-144 19-126 (146)
432 2qsq_A Carcinoembryonic antige 98.7 3.6E-08 1.2E-12 55.3 6.3 45 9-53 63-109 (111)
433 3nfj_J T cell receptor beta ch 98.7 2.6E-07 8.9E-12 58.5 11.0 64 59-125 6-95 (245)
434 2q87_A CMRF35-H antigen; all-b 98.7 1.1E-07 3.8E-12 53.0 8.2 80 62-143 4-108 (110)
435 2yuz_A Myosin-binding protein 98.7 3.2E-08 1.1E-12 54.4 5.8 49 5-55 45-97 (100)
436 3auv_A SC-DSFV derived from th 98.7 4.3E-08 1.5E-12 63.4 7.3 83 57-142 15-120 (276)
437 1h5b_A Murine T cell receptor 98.7 1.5E-07 5.3E-12 52.7 8.7 67 59-128 6-95 (113)
438 1xt5_A Variable region-contain 98.7 1.6E-07 5.3E-12 54.2 8.9 79 60-141 10-133 (135)
439 2edj_A Roundabout homolog 2; K 98.7 6.2E-08 2.1E-12 53.0 6.8 46 9-54 53-99 (100)
440 3mj6_A Junctional adhesion mol 98.7 1.7E-07 5.8E-12 60.0 9.8 84 57-140 8-121 (268)
441 2ywz_A NEW antigen receptor va 98.7 1.3E-07 4.4E-12 52.9 8.2 64 59-125 5-87 (111)
442 4ety_A LAIR-1, mlair1, leukocy 98.7 2.6E-07 9E-12 52.2 9.4 75 64-142 18-102 (118)
443 2ptt_A CD48 antigen; CD244, CD 98.7 1.8E-07 6.2E-12 52.1 8.7 77 61-142 10-109 (110)
444 3o3u_N Maltose-binding peripla 98.7 5.6E-08 1.9E-12 69.0 8.0 79 63-144 375-472 (581)
445 3irg_B Obscurin-like protein 1 98.7 4E-08 1.4E-12 54.4 5.8 50 6-55 54-107 (107)
446 3rrq_A Protein PD-1, programme 98.7 2.2E-07 7.7E-12 53.4 9.1 82 59-142 6-116 (129)
447 1moe_A Anti-CEA MAB T84.66; an 98.7 1.3E-07 4.3E-12 59.7 8.7 84 59-142 6-113 (240)
448 1i8k_A Epidermal growth factor 98.7 1.6E-07 5.5E-12 52.2 8.1 65 59-126 6-93 (107)
449 4f9p_D 103.2 anti-BTN3A1 antib 98.7 4E-07 1.4E-11 57.4 10.5 112 10-124 66-227 (254)
450 3r0n_A Poliovirus receptor-rel 98.7 1.3E-07 4.6E-12 54.1 7.9 77 61-138 9-127 (128)
451 2oyp_A Hepatitis A virus cellu 98.7 3.7E-08 1.3E-12 54.7 5.3 76 64-140 4-107 (109)
452 2edn_A Myosin-binding protein 98.7 1.9E-08 6.4E-13 57.0 4.0 38 17-54 80-117 (118)
453 2dav_A SLOW MYBP-C, myosin-bin 98.7 4.2E-08 1.4E-12 56.1 5.4 37 17-53 75-111 (126)
454 3m45_A Cell adhesion molecule 98.7 9.1E-08 3.1E-12 52.9 6.5 47 8-55 57-108 (108)
455 3eow_R Poliovirus receptor; im 98.7 1.9E-08 6.5E-13 62.8 4.0 83 62-145 7-119 (221)
456 3kvq_A Vascular endothelial gr 98.7 8.6E-08 2.9E-12 53.1 6.3 47 9-55 54-102 (108)
457 3pl6_D MBP peptide / T-cell re 98.7 2.3E-07 7.8E-12 59.6 9.1 82 57-141 29-138 (268)
458 1n26_A IL-6 receptor alpha cha 98.7 1.5E-07 5.1E-12 62.3 8.4 79 61-145 13-97 (325)
459 1wwb_X Protein (brain derived 98.7 2.2E-08 7.4E-13 55.4 3.7 40 17-56 62-101 (103)
460 2dru_A Chimera of CD48 antigen 98.7 1.7E-07 6E-12 56.9 8.1 77 62-143 7-106 (180)
461 4acp_A IG gamma-1 chain C regi 98.7 9.3E-09 3.2E-13 65.4 2.5 95 30-128 1-113 (240)
462 3omz_A Human vdelta1 gamma del 98.7 1.5E-07 5.3E-12 60.2 8.2 82 57-141 5-118 (259)
463 3khq_A B-cell antigen receptor 98.7 1.9E-07 6.6E-12 54.0 7.8 84 57-144 20-120 (133)
464 2p1y_A Bispecific alpha/beta T 98.7 2.5E-07 8.4E-12 58.3 8.9 66 59-128 5-97 (238)
465 3moq_A NEW antigen receptor va 98.7 2.9E-07 1E-11 52.7 8.4 68 57-127 3-89 (126)
466 4dzb_B Vbeta2 (MAIT T cell rec 98.6 2.8E-07 9.6E-12 58.4 9.0 66 59-127 6-100 (246)
467 2coq_A NEW antigen receptor va 98.6 2E-07 6.8E-12 51.9 7.4 64 59-125 5-87 (108)
468 3qp3_A Titin; I-SET IG-like, s 98.6 1E-07 3.5E-12 52.3 6.1 50 5-54 48-101 (103)
469 1he7_A High affinity nerve gro 98.6 5.1E-08 1.7E-12 55.8 4.9 40 17-56 63-102 (126)
470 3bkj_L WO2 IGG2A FAB fragment 98.6 4.3E-07 1.5E-11 57.8 9.7 85 57-141 37-146 (252)
471 1svz_A Immunoglobulin;, single 98.6 2.8E-07 9.4E-12 58.5 8.8 84 59-142 6-114 (247)
472 1i3g_L Antibody FV fragment; a 98.6 4.4E-07 1.5E-11 50.7 8.6 67 57-126 7-96 (111)
473 2nms_A CMRF35-like-molecule 1; 98.6 1.4E-06 4.8E-11 49.7 10.9 82 60-144 8-114 (124)
474 1gxe_A Myosin binding protein 98.6 1.2E-07 4.2E-12 55.3 6.5 45 8-52 90-138 (139)
475 2rgs_A I, IG gamma-2B heavy ch 98.6 1.7E-08 5.9E-13 63.1 2.9 61 66-128 23-100 (218)
476 3cx2_A Myosin-binding protein 98.6 6.2E-08 2.1E-12 53.9 4.9 36 17-52 72-107 (108)
477 3bqu_C 3H6 FAB light chain; be 98.6 2.8E-08 9.6E-13 62.5 3.7 68 58-128 27-117 (233)
478 3kg5_A B-cell antigen receptor 98.6 4.9E-07 1.7E-11 52.4 8.6 86 58-146 22-124 (134)
479 1eeq_A Kappa-4 immunoglobulin 98.6 6.7E-07 2.3E-11 50.2 8.9 68 59-126 6-99 (114)
480 4ffy_L DENV1-E111 single chain 98.6 5.4E-07 1.8E-11 51.5 8.5 85 58-142 5-113 (126)
481 2eo9_A Roundabout homolog 1; b 98.6 7.6E-08 2.6E-12 54.3 4.8 47 9-55 53-100 (118)
482 1g1c_A Immunoglobulin-like dom 98.6 1.7E-07 6E-12 51.0 6.1 37 17-53 62-98 (99)
483 1pew_A JTO2, A lambda-6 type i 98.6 5E-07 1.7E-11 50.3 8.0 64 61-126 7-94 (109)
484 2gjj_A A21 single-chain antibo 98.6 6.2E-07 2.1E-11 57.6 9.4 86 57-142 8-119 (264)
485 3q0h_A T cell immunoreceptor w 98.6 1.9E-07 6.6E-12 52.8 6.2 50 9-58 62-113 (117)
486 2d9q_B Granulocyte colony-stim 98.6 1.2E-07 4.2E-12 62.3 6.2 78 63-144 9-100 (313)
487 1nct_A Titin; cell adhesion, g 98.6 1.4E-07 4.7E-12 52.3 5.5 47 6-52 55-105 (106)
488 2or7_A T-cell immunoglobulin a 98.6 3.1E-07 1.1E-11 51.6 7.0 81 61-143 4-112 (115)
489 2bk8_A Connectin, M1, titin he 98.6 2.2E-07 7.5E-12 50.5 6.2 49 5-53 42-94 (97)
490 1x9q_A SCFV, 4M5.3 anti-fluore 98.6 2.6E-07 8.8E-12 59.5 7.5 86 56-141 17-127 (268)
491 4ei6_B Vbeta16 XV19 type II na 98.6 7.3E-07 2.5E-11 56.4 9.4 78 59-140 7-115 (245)
492 2lu7_A Obscurin-like protein 1 98.6 2.4E-07 8.3E-12 49.2 6.1 46 5-54 35-84 (84)
493 1wit_A Twitchin 18TH IGSF modu 98.6 1.2E-07 4.2E-12 51.1 5.1 36 17-52 58-93 (93)
494 1nfd_E H57 FAB; complex (immun 98.6 2.2E-07 7.6E-12 57.5 6.9 63 61-126 6-91 (212)
495 3puc_A Titin; I-SET IG-like do 98.6 2E-07 7E-12 50.7 6.0 48 6-53 47-98 (99)
496 2jju_A Signal regulatory prote 98.6 4E-07 1.4E-11 52.2 7.3 65 59-126 8-96 (127)
497 1gl4_B Basement membrane-speci 98.6 2.4E-07 8.3E-12 50.4 6.1 39 14-52 59-97 (98)
498 2e7c_A Myosin-binding protein 98.6 1.4E-07 4.8E-12 53.2 5.3 39 17-55 79-117 (118)
499 3tf7_C 42F3 MUT7 SCFV (42F3 al 98.5 8.7E-07 3E-11 56.6 9.4 82 57-141 6-116 (256)
500 3rbg_A Cytotoxic and regulator 98.5 2.2E-07 7.7E-12 52.9 6.0 48 8-56 52-104 (124)
No 1
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.89 E-value=1.1e-21 Score=120.72 Aligned_cols=132 Identities=24% Similarity=0.342 Sum_probs=108.5
Q ss_pred CCceEEeC--CeEEEcCCCCCCCeEEEEEeccCCcc-eeEEEEEEEecCceEEeCCCcEEEecCCcEEEEEEec-CCCCC
Q psy11131 9 GPRTRVLG--PILAIEGVTAEDSGTYRCSSSNIGGE-ATAEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCEIT-PYDSG 84 (150)
Q Consensus 9 ~~~~~~~~--~~l~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~ 84 (150)
+.++.+.. ..|.|.+++..|+|.|+|.+.+..+. ......|.|..+|.+...+....+.+|+.+.|.|.+. .|
T Consensus 52 ~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p--- 128 (192)
T 2iep_A 52 DTRYSIRENGQLLTILSVEDSDDGIYCCTANNGVGGAVESCGALQVKMKPKITRPPINVKIIEGLKAVLPCTTMGNP--- 128 (192)
T ss_dssp CTTEEEEGGGTEEEESSCCGGGCEEEEEEEECSSSCCEEEEEEEEEEEEEEEEECCCCEEEETTSCEEECCEEEEES---
T ss_pred CccEEEcCCccEEEEcCCCcccCeEEEEEEEcCCCceeEeEEEEEEEeCCccccCCcceEEeCCCcEEEEEEEeccC---
Confidence 45666554 56999999999999999999987666 4566788888888877777778889999999999999 88
Q ss_pred CcEEEEeecCcccCCCcc-----eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCcC
Q psy11131 85 PYLIAWFKDGRQIPGRTS-----STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGTR 143 (150)
Q Consensus 85 ~~~~~w~~~~~~~~~~~~-----~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p 143 (150)
.+.+.|++++..+..... ...|.|.++..+|.|.|.|.+.|..|...+..+.|.|..+|
T Consensus 129 ~~~v~W~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~pp 192 (192)
T 2iep_A 129 KPSVSWIKGDSALRENSRIAVLESGSLRIHNVQKEDAGQYRCVAKNSLGTAYSKLVKLEVEVFA 192 (192)
T ss_dssp CCEEEEEETTEECCCCSSEEECTTSCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred CceEEEEeCCEEccCCCcEEEecCCcEEEecCChhhCEEEEEEEEcCCCcEEEEEEEEEEEeCC
Confidence 889999999887765432 45799999999999999999999998544677889888765
No 2
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.89 E-value=6.1e-22 Score=133.95 Aligned_cols=121 Identities=28% Similarity=0.425 Sum_probs=107.2
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCc
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGR 95 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~ 95 (150)
+.|.|.+++.+|+|.|+|.+.|..|.......|.|..+|.+...+....+.+|+.+.|.|.+. .| .|.+.|++++.
T Consensus 258 ~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~~~~~~~~~v~~g~~v~l~C~~~g~P---~p~i~W~k~g~ 334 (384)
T 3kld_A 258 GILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQPNWVQIINDIHVAMEESVFWECKANGRP---KPTYRWLKNGD 334 (384)
T ss_dssp CEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEEECTTCCEEEECEEEEES---CCEEEEEETTE
T ss_pred cEEEECCCChhhCEEEEEEEEcCCCeEEEEEEEEEecCCccccCCCceEecCCCCEEEEeECCccC---CCeEEEEECCE
Confidence 689999999999999999999999998888999999888877777778899999999999999 99 99999999998
Q ss_pred ccCCCcc----eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcC
Q psy11131 96 QIPGRTS----STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGG 141 (150)
Q Consensus 96 ~~~~~~~----~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~ 141 (150)
.+....+ ...|.|..+..+|.|.|.|.|.|..| .....+.|.|.+
T Consensus 335 ~l~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~N~~G-~~~~~a~L~V~~ 383 (384)
T 3kld_A 335 PLLTRDRIQIEQGTLNITIVNLSDAGMYQCVAENKHG-VIFSSAELSVIA 383 (384)
T ss_dssp ECCCBTTEEEETTEEEESSCCGGGCEEEEEEEEETTE-EEEEEEEEEEC-
T ss_pred ECCCCccEEEeCCEEEEeecChhhCEEEEEEEEeCCc-eEEeceEEEEec
Confidence 8755433 45899999999999999999999999 678888888764
No 3
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.88 E-value=7.4e-22 Score=123.18 Aligned_cols=122 Identities=20% Similarity=0.270 Sum_probs=97.6
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCceEEeCCCcEEEecCCcEEEEEEe-c-CCCCCCcEEEEeecC
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCEI-T-PYDSGPYLIAWFKDG 94 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~-~-~p~~~~~~~~w~~~~ 94 (150)
.+|.|.+++.+|+|.|+|.+.+..+.....+.|.|..+|.....+....+.+|+.+.|.|.+ . .| .+.+.|++++
T Consensus 84 ~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~~g~p---~~~v~W~~~~ 160 (214)
T 3jz7_A 84 ASINVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVKPSGTRCFVDGSEEIGNDFKLKCEPKEGSL---PLQFEWQKLS 160 (214)
T ss_dssp CCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCBSCEEEEESCCBTTCCEEEEEECSBCCS---SCEEEEEECS
T ss_pred ccEEEccCChhhCeEEEEEEEeCCCccccEEEEEEEcCCCCceeeeecceecCCcEEEEecCCCCCC---CCEEEEEECC
Confidence 67999999999999999999998888888889999877654332222236789999999999 6 88 8999999954
Q ss_pred c--ccCCCcc----eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCc
Q psy11131 95 R--QIPGRTS----STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGT 142 (150)
Q Consensus 95 ~--~~~~~~~----~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~ 142 (150)
. .+..... ...|.|.++..+|.|.|.|.+.|..| .....+.|.|..|
T Consensus 161 ~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g-~~~~~~~l~V~~P 213 (214)
T 3jz7_A 161 DSQTMPTPWLAEMTSPVISVKNASSEYSGTYSCTVQNRVG-SDQCMLRLDVVPP 213 (214)
T ss_dssp TTCCCCGGGGGGTTSSEEEECSCCGGGCEEEEEEEECSSC-EEEEEEEECCBCC
T ss_pred CCCccCccceeccCCCEEEEecCCHHHCEEEEEEEEcCCC-cEEEEEEEEEeCC
Confidence 3 2221111 56899999999999999999999999 5778888888744
No 4
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.88 E-value=4.3e-21 Score=129.57 Aligned_cols=126 Identities=34% Similarity=0.600 Sum_probs=110.3
Q ss_pred CCCceEEeCCeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCceEEeCCCcEEEecCCcEEEEEEec-CCCCCCc
Q psy11131 8 PGPRTRVLGPILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPY 86 (150)
Q Consensus 8 ~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~ 86 (150)
.+.++....+.|.|.+++.+|+|.|+|.+.|..|..+..+.|.|..++.+...+....+.+|+.+.|.|.+. .| .+
T Consensus 261 ~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p---~p 337 (388)
T 2v5m_A 261 LNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYTGNP---IK 337 (388)
T ss_dssp CSSSEEEETTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEEEEESSEEEECTTSCEEEEEEEEEEC---CC
T ss_pred ccCceecccCEEEECcCCHHHCeEEEEEEecCCCceeEEEEEEEeCCCccccCCCcEEecCCCCEEEEEEecccc---CC
Confidence 345666666899999999999999999999999988888999999888777777778889999999999999 88 89
Q ss_pred EEEEeecCcccCCCcceeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEE
Q psy11131 87 LIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQL 139 (150)
Q Consensus 87 ~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v 139 (150)
.+.|++++..+... ...|.|.++..+|.|.|.|.+.|..| .....+.|.|
T Consensus 338 ~i~W~~~g~~i~~~--~~~L~i~~v~~~d~G~Y~C~a~N~~G-~~~~~~~l~V 387 (388)
T 2v5m_A 338 TVSWMKDGKAIGHS--ESVLRIESVKKEDKGMYQCFVRNDRE-SAEASAELKL 387 (388)
T ss_dssp EEEEEETTEECSCC--SSEEEESSCCGGGCEEEEEEEECSSC-EEEEEEEEEE
T ss_pred eEEEEECCEECccC--CCEEEEecCChhhCEEEEEEEEcCCC-cEEEEEEEEe
Confidence 99999999887654 46899999999999999999999999 6777777765
No 5
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.88 E-value=6.8e-21 Score=119.16 Aligned_cols=127 Identities=29% Similarity=0.459 Sum_probs=102.2
Q ss_pred CeEEEcCC-CCCCCeEEEEEeccCCcceeEEEEEEEecC-------ceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcE
Q psy11131 17 PILAIEGV-TAEDSGTYRCSSSNIGGEATAEVRLQVSTP-------YRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYL 87 (150)
Q Consensus 17 ~~l~i~~~-~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~-------~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~ 87 (150)
..|.|.++ +.+|+|.|+|.+.+..+.....+.|.|... |.+...+....+.+|+.+.|.|.+. .| .+.
T Consensus 63 ~~L~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p---~p~ 139 (212)
T 2yd6_A 63 SVLRIQPLRTPRDEAIYECVASNNVGEISVSTRLTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNP---DPE 139 (212)
T ss_dssp EEEEECSCCTTTTCEEEEEEEEETTEEEEEEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEEEEEEECSS---CCE
T ss_pred eEEEEeccCCCCCCeEEEEEEEcCCCcEEEEEEEEEeccCccCCCcceeecCCcceeEecCCCEEEEEEecCCC---CCe
Confidence 46999999 599999999999998888888888998754 4555666667788999999999999 88 899
Q ss_pred EEEeecCcccCCCc---c--------eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCcCccc
Q psy11131 88 IAWFKDGRQIPGRT---S--------STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGTRNIK 146 (150)
Q Consensus 88 ~~w~~~~~~~~~~~---~--------~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p~~~ 146 (150)
+.|++++..+.... . ...|.|.++..+|.|.|.|.+.|..|...+..+.|.+..++...
T Consensus 140 v~W~~~g~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~s~~a~l~~~~~~~~~ 209 (212)
T 2yd6_A 140 ITWFKDFLPVDTSNNNGRIKQLRSESIGALQIEQSEESDQGKYECVATNSAGTRYSAPANLYVRGTKHHH 209 (212)
T ss_dssp EEEEETTEEC------CCEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC-----
T ss_pred EEEEECCccccCcCCCceEEEEecCCeEEEEEcCCCcccCEEEEEEEECCCCccccccccEEEEeccccc
Confidence 99999988775431 1 37899999999999999999999999766778888888776543
No 6
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.87 E-value=5.1e-21 Score=135.29 Aligned_cols=125 Identities=26% Similarity=0.491 Sum_probs=109.9
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCc
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGR 95 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~ 95 (150)
..|.|.+++.+|+|.|+|.+.|..|.....+.|.|..+|.+...+....+.+|+.+.|.|.+. .| .+.+.|++++.
T Consensus 347 ~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~P~~~~~~~~~~~~~G~~v~l~C~~~g~P---~p~v~W~k~g~ 423 (570)
T 3b43_A 347 AVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKKPHPVETLKGADVHLECELQGTP---PFQVSWHKDKR 423 (570)
T ss_dssp EEEEEESCCGGGCEEEEEEEEBTTBCCEEEEEECEECCCEECSCCCCEEECTTCCEEEEEEEESSS---SCCCEEEETTE
T ss_pred EEEEECCCCcccCEEEEEEEEeCCCEEEEEEEEEecCCCeeecCCCceeecCCCEEEEEEEEecCC---CCEEEEEECCE
Confidence 579999999999999999999999998999999999998888777778888999999999999 99 89999999998
Q ss_pred ccCCCcc--------eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCcCcc
Q psy11131 96 QIPGRTS--------STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGTRNI 145 (150)
Q Consensus 96 ~~~~~~~--------~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p~~ 145 (150)
.+..... ...|.|.++..+|.|.|.|.|.|..| .....+.|.|..+|..
T Consensus 424 ~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~N~~G-~~~~~~~l~v~~~P~~ 480 (570)
T 3b43_A 424 ELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVG-SDTCVGSITLKAPPRF 480 (570)
T ss_dssp ECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSC-EEEEEEEEEECCCCEE
T ss_pred ECcCCCCEEEEEcCCEEEEEECCCChhhCEEEEEEEEECCC-eEEEEEEEEeccCCcc
Confidence 7765433 24788999999999999999999999 5777888888877653
No 7
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.87 E-value=1.1e-20 Score=122.72 Aligned_cols=120 Identities=28% Similarity=0.504 Sum_probs=105.4
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCc
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGR 95 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~ 95 (150)
..|.|.+++.+|+|.|+|.+.+..|.....+.|.|..+|.+...+....+.+|+.+.|.|.+. .| .+.+.|++++.
T Consensus 155 ~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p---~~~v~W~~~~~ 231 (284)
T 2rik_A 155 AVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKKPHPVETLKGADVHLECELQGTP---PFQVSWHKDKR 231 (284)
T ss_dssp EEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCBCCSCCCCEEECTTCCEEEEEECBSSS---CCEEEEEETTE
T ss_pred EEEEECCCCcccCEEEEEEEEcCCCceeEEEEEEEecCCcceeCCCcceecCCCeEEEEEEEEecC---CCEEEEEECCE
Confidence 579999999999999999999998888889999999988877777777889999999999999 88 89999999988
Q ss_pred ccCCCcc--------eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEc
Q psy11131 96 QIPGRTS--------STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLG 140 (150)
Q Consensus 96 ~~~~~~~--------~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~ 140 (150)
.+..... ...|.|.++..+|.|.|.|.+.|..| .....+.|.|.
T Consensus 232 ~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G-~~~~~~~l~V~ 283 (284)
T 2rik_A 232 ELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVG-SYTCVGSITLK 283 (284)
T ss_dssp EECBTTTEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTE-EEEEEEEEEEC
T ss_pred ECcCCCCEEEEEcCCEEEEEEcCCCcccCEEEEEEEEeCCC-ceeEEEEEEEc
Confidence 7654432 25789999999999999999999999 57777888775
No 8
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.87 E-value=4.8e-21 Score=129.83 Aligned_cols=130 Identities=29% Similarity=0.436 Sum_probs=111.9
Q ss_pred CceEEeC-CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcE
Q psy11131 10 PRTRVLG-PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYL 87 (150)
Q Consensus 10 ~~~~~~~-~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~ 87 (150)
.++.... +.|.|.+++.+|+|.|+|.+.|..|..+....|.|..+|.+...+....+.+|+.+.|.|.+. .| .+.
T Consensus 267 ~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p---~p~ 343 (403)
T 3laf_A 267 KKYSLLGGSNLLISNVTDDDSGTYTCVVTYKNENISASAELTVLVPPWFLNHPSNLYAYESMDIEFECAVSGKP---VPT 343 (403)
T ss_dssp SSEEEETTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEECCTTCCEEECCEEEEES---CCE
T ss_pred ceEEECCccEEEEeCCCHHHCEEEEEEEEcCCCceEEEEEEEEECCCcEeecCcceEEecCCeEEEEEEEeecc---CCE
Confidence 3444444 789999999999999999999998888899999999888888777778888999999999999 88 899
Q ss_pred EEEeecCcccCCCcc-----eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCcC
Q psy11131 88 IAWFKDGRQIPGRTS-----STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGTR 143 (150)
Q Consensus 88 ~~w~~~~~~~~~~~~-----~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p 143 (150)
+.|++++..+..... ...|.|..+..+|.|.|.|.+.|..| .....+.|.|.+||
T Consensus 344 v~W~~~g~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G-~~~~~~~l~V~~P~ 403 (403)
T 3laf_A 344 VNWMKNGDVVIPSDYFQIVGGSNLRILGVVKSDEGFYQCVAENEAG-NAQSSAQLIVPKPA 403 (403)
T ss_dssp EEEEETTEECCCSSSEEEETTTEEEESSCCGGGCEEEEEEEEETTE-EEEEEEEEECCCC-
T ss_pred EEEEECCEECCCCCcEEEecCccEEEeccccccCEEEEEEEEcCCc-eEEEEEEEEEeCCC
Confidence 999999987754432 45799999999999999999999999 68888899888765
No 9
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.87 E-value=1.3e-20 Score=117.59 Aligned_cols=133 Identities=17% Similarity=0.227 Sum_probs=104.1
Q ss_pred cCCCCceEEeC----CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEec---------------------CceEEeC
Q psy11131 6 VLPGPRTRVLG----PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVST---------------------PYRVDVN 60 (150)
Q Consensus 6 ~~~~~~~~~~~----~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~---------------------~~~~~~~ 60 (150)
+..+.++.+.. ..|.|.+++.+|+|.|+|.+.+..+.....+.|.|.. ++.....
T Consensus 44 i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 123 (212)
T 2r15_A 44 IRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGL 123 (212)
T ss_dssp CCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHSCEEEEBC
T ss_pred ccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceEEEEEEEEeeccchhhhccccCcccccccCCCcccccC
Confidence 34445555433 3499999999999999999999877777666666542 2233344
Q ss_pred CCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCcc---------eeeEEEccCCCCCCceEEEEEEeCCCCc
Q psy11131 61 PPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRTS---------STSLVINPVGREDRGIYQCIARRSDGDV 130 (150)
Q Consensus 61 ~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~~---------~~~l~~~~~~~~~~g~y~C~~~~~~g~~ 130 (150)
+....+.+|+.+.|.|.+. .| .+.+.|++++..+..... ...|.|.++..+|.|.|.|.+.|..| .
T Consensus 124 ~~~~~v~~g~~~~l~C~~~g~p---~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g-~ 199 (212)
T 2r15_A 124 PDVVTIQEGKALNLTCNVWGDP---PPEVSWLKNEKALAQTDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYG-S 199 (212)
T ss_dssp CSEEEEETTCCEEEEEEEECSS---CCEEEEEETTEEECCCSSEEEEEETTTEEEEEESSCCGGGCEEEEEEEEETTE-E
T ss_pred CCcEEEccCCeEEEEEEEcCCC---CceEEEEECCeECccCCCEEEEEcCCCEEEEEEcCcchHHCeEEEEEEEcCCC-c
Confidence 5567889999999999999 89 899999999887765432 24899999999999999999999999 5
Q ss_pred eeeeEEEEEcCc
Q psy11131 131 AQGSAELQLGGT 142 (150)
Q Consensus 131 ~~~~~~l~v~~~ 142 (150)
....+.|.|..|
T Consensus 200 ~~~~~~l~V~~P 211 (212)
T 2r15_A 200 ETSDFTVSVFIP 211 (212)
T ss_dssp EEEEEEEEEECC
T ss_pred EEEEEEEEEEcc
Confidence 777888887654
No 10
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.87 E-value=1.6e-20 Score=115.53 Aligned_cols=119 Identities=24% Similarity=0.239 Sum_probs=100.8
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEee--c
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFK--D 93 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~--~ 93 (150)
+.|.|.+++.+|+|.|+|.+.+. +.....+.|.|..+|.+...+....+.+|+.+.|.|.+. .| .+.+.|++ +
T Consensus 56 ~~L~i~~~~~~d~G~Y~C~~~n~-~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p---~p~i~W~~~~~ 131 (190)
T 2wv3_A 56 MEYRINKPRAEDSGEYHCVYHFV-SAPKANATIEVKAAPDITGHKRSENKNEGQDAMMYCKSVGYP---HPEWMWRKKEN 131 (190)
T ss_dssp EEEEESSCCGGGCEEEEEEEEET-TEEEEEEEEEEECCCEEEEECSEEEEETTSCEEEEEEEECSS---CCEEEEEEEET
T ss_pred EEEEEecCCcccCEEEEEEEEeC-CcccccEEEEEecCCcccccCCcceeeCCCcEEEEEEeCccC---CCceEEEEcCC
Confidence 67999999999999999999998 888888999999988887777777899999999999999 89 89999999 5
Q ss_pred CcccCC---Ccc--------eeeEEEccCC-CCCCceEEEEEEeCCCCceeeeEEEEEc
Q psy11131 94 GRQIPG---RTS--------STSLVINPVG-REDRGIYQCIARRSDGDVAQGSAELQLG 140 (150)
Q Consensus 94 ~~~~~~---~~~--------~~~l~~~~~~-~~~~g~y~C~~~~~~g~~~~~~~~l~v~ 140 (150)
+..+.. ... ...|.|.++. .+|.|.|.|.+.|..| .....+.|.|.
T Consensus 132 g~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g-~~~~~~~l~V~ 189 (190)
T 2wv3_A 132 GVFEEISNSSGRFFIINKENYTELNIVNLQITEDPGEYECNATNSIG-SASVSTVLRVR 189 (190)
T ss_dssp TEEEECCCTTSCEEEEECSSEEEEEECSCCTTTSCEEEEEEEECSSC-EEEEEEEEEEE
T ss_pred CceeeeecCCCeEEEecCCCeeEEEEEeccccCCCEEEEEEEEecCC-cceeEEEEEEE
Confidence 554421 111 2379999999 7999999999999999 57777777764
No 11
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.87 E-value=1.1e-20 Score=118.23 Aligned_cols=133 Identities=25% Similarity=0.372 Sum_probs=106.5
Q ss_pred CCCceEEeC-----CeEEEcCCCC-CCCeEEEEEeccCCcc-eeEEEEEEEecC-------ceEEeCCCcEEEecCCcEE
Q psy11131 8 PGPRTRVLG-----PILAIEGVTA-EDSGTYRCSSSNIGGE-ATAEVRLQVSTP-------YRVDVNPPLLSVHLDGSAN 73 (150)
Q Consensus 8 ~~~~~~~~~-----~~l~i~~~~~-~d~G~Y~C~~~~~~~~-~~~~~~l~v~~~-------~~~~~~~~~~~~~~g~~~~ 73 (150)
.+.++.+.. ..|.|.+++. .|+|.|+|.+.+..+. .+..+.|.|... |.+...+....+.+|+.+.
T Consensus 50 ~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~ 129 (212)
T 2yd1_A 50 TQSRYTVLEQPGGISILRIEPVRAGRDDAPYECVAENGVGDAVSADATLTIYEGDKTPAGFPVITQGPGTRVIEVGHTVL 129 (212)
T ss_dssp TSTTEEEEEETTTEEEEEESSCCTTTTCSEEEEEEECSSSCEEEEEEEEEEECTTCSCTTCCEEEECCCCEEEETTCCEE
T ss_pred CcceeEEEEcCCCeEEEEEEecCCCCcCceEEEEEEeCCCCeEEeeEEEEEecccCCCCCCCeeEeCCCceEeecCCeEE
Confidence 445555532 4799999999 9999999999998877 778888998864 5666666677888999999
Q ss_pred EEEEec-CCCCCCcEEEEeecCcccCCCcc-----eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCcC
Q psy11131 74 FQCEIT-PYDSGPYLIAWFKDGRQIPGRTS-----STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGTR 143 (150)
Q Consensus 74 l~C~~~-~p~~~~~~~~w~~~~~~~~~~~~-----~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p 143 (150)
|.|.+. .| .+.+.|++++..+..... ...|.|.++..+|.|.|.|.+.|..|...+..+.|.|.+.+
T Consensus 130 l~C~~~g~p---~p~i~W~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~V~~~~ 202 (212)
T 2yd1_A 130 MTCKAIGNP---TPNIYWIKNQTKVDMSNPRYSLKDGFLQIENSREEDQGKYECVAENSMGTEHSKATNLYVKVRR 202 (212)
T ss_dssp ECCEEECSS---CCEEEEEETTEECCTTSTTEEEETTEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC--
T ss_pred EEEEeccCC---CCeEEEEECCeEcccCCCeEEccCCeEEEccCChhhCEEEEEEeecCCCceeEEEEEEEEEecc
Confidence 999999 88 899999999887764322 45899999999999999999999999433445788887653
No 12
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.87 E-value=1e-20 Score=117.74 Aligned_cols=132 Identities=22% Similarity=0.288 Sum_probs=101.9
Q ss_pred CCceEEeC-CeEEEcCCCCCCCeEEEEEeccCC-cceeEEEEEEEecC---ceEEeCCCcEEEecCCcEEEEEEecCCCC
Q psy11131 9 GPRTRVLG-PILAIEGVTAEDSGTYRCSSSNIG-GEATAEVRLQVSTP---YRVDVNPPLLSVHLDGSANFQCEITPYDS 83 (150)
Q Consensus 9 ~~~~~~~~-~~l~i~~~~~~d~G~Y~C~~~~~~-~~~~~~~~l~v~~~---~~~~~~~~~~~~~~g~~~~l~C~~~~p~~ 83 (150)
..|+.+.. ++|.|.+++.+|+|.|+|.+.+.. +.......|.|..+ +.+...+.. +.+|+.+.|.|.+..+
T Consensus 62 ~~r~~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~--~~~g~~v~l~C~~~~~-- 137 (208)
T 3r4d_A 62 SGREIIYSNGSLLFQMITMKDMGVYTLDMTDENYRRTQATVRFHVHQPVTQPFLQVTNTT--VKELDSVTLTCLSNDI-- 137 (208)
T ss_dssp CSSEEECTTSCEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEEECCCCCCEEEESCSS--CCTTCCEEEEEECSCT--
T ss_pred cceeEEecCCeEEEccccccCCeEEEEEEEcccCceeEEEEEEEeccCCCCCEEecCCce--EeeCCCEEEEEECCCC--
Confidence 34555555 689999999999999999999874 55667778888754 344444333 7889999999998844
Q ss_pred CCcEEEEeecCcccCCCcc------eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCcCcc
Q psy11131 84 GPYLIAWFKDGRQIPGRTS------STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGTRNI 145 (150)
Q Consensus 84 ~~~~~~w~~~~~~~~~~~~------~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p~~ 145 (150)
++.+.|++++..+..... ...|.|.++..+|.|.|.|.+.|..|...+..+.|.|..+|.-
T Consensus 138 -pp~i~W~~~g~~l~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~v~~~~~~ 204 (208)
T 3r4d_A 138 -GANIQWLFNSQSLQLTERMTLSQNNSILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDIIFDPHH 204 (208)
T ss_dssp -TCEEEEEETTEECCCCSSEEEETTTTEEEESSCCGGGCEEEEEEEECTTCCEECCCEEECCC-----
T ss_pred -CCceEEEECCEeCCCCCCeEEcCCCCEEEEeccCHHhCeEEEEEEecCCCcccCCceeeeEEeCCcc
Confidence 569999999887764432 3679999999999999999999999987888899988877643
No 13
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.87 E-value=2.6e-20 Score=114.43 Aligned_cols=131 Identities=19% Similarity=0.353 Sum_probs=101.6
Q ss_pred cCCCCceEEeC----CeEEEcCCCCCCCeEEEEEeccCCcce-eEEEEEEEecCceEEeCCCcEEEecCCcEEEEEEec-
Q psy11131 6 VLPGPRTRVLG----PILAIEGVTAEDSGTYRCSSSNIGGEA-TAEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCEIT- 79 (150)
Q Consensus 6 ~~~~~~~~~~~----~~l~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~- 79 (150)
+..+.++.+.. ..|.|.+++.+|+|.|+|.+.+..+.. +..+.|.|..+|.+...+....+.+|+.+.|.|.+.
T Consensus 43 ~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g 122 (189)
T 2v44_A 43 IISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSS 122 (189)
T ss_dssp CCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCEEEEEEEEEEECCCEEESCCCSEEEETTSCEEECCEEEC
T ss_pred cCCCceEEEECCCCeEEEEEccCCcccCeEEEEEEEeCCCCcEEEEEEEEEecCCceeecCCcEEEeCCCCEEEEEEECc
Confidence 34455665544 389999999999999999999987664 677888898888777666777889999999999999
Q ss_pred CCCCCCcEEEEeecCcccCC--Ccc-----eeeEEEccCCCCCCceEEEEEEeCCCCc-eeeeEEEEE
Q psy11131 80 PYDSGPYLIAWFKDGRQIPG--RTS-----STSLVINPVGREDRGIYQCIARRSDGDV-AQGSAELQL 139 (150)
Q Consensus 80 ~p~~~~~~~~w~~~~~~~~~--~~~-----~~~l~~~~~~~~~~g~y~C~~~~~~g~~-~~~~~~l~v 139 (150)
.| .+.+.|++++..+.. ... ...|.|.++..+|.|.|.|.+.|..+.. ....+.+.|
T Consensus 123 ~p---~p~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~~~~~~v~V 187 (189)
T 2v44_A 123 SP---APAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIV 187 (189)
T ss_dssp SS---CCEEEEEEEC--CEECCCTTEEECTTSCEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEE
T ss_pred CC---CCcEEEEECCcEEeccCCCCEEEecCCcEEEEEcCcccCeEEEEEEEccccCceeeeeEEEEE
Confidence 88 899999998876642 111 4589999999999999999999998632 233444444
No 14
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.87 E-value=1.7e-20 Score=115.56 Aligned_cols=120 Identities=28% Similarity=0.368 Sum_probs=101.0
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEe---cCceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEee
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVS---TPYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFK 92 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~---~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~ 92 (150)
..|.|.+++..|+|.|+|.+.+..+.......|.|. .+|.+...+....+.+|+.+.|.|.+. .| .+.+.|++
T Consensus 63 ~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p---~~~v~W~~ 139 (194)
T 2a38_A 63 AKLTIPAVTKANSGRYSLKATNGSGQATSTAELLVKAETAPPNFVQRLQSMTVRQGSQVRLQVRVTGIP---TPVVKFYR 139 (194)
T ss_dssp EEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCEEEEEEECCCCEEECTTEEEEEEEEEEEES---CCEEEEEE
T ss_pred EEEEECCCCcccCEEEEEEEEcCCceEeEEEEEEEccCCCCCEEEeCCccEEEcCCCEEEEEEEEEEec---CCeEEEEE
Confidence 479999999999999999999988887778888887 455566666677889999999999999 88 88999999
Q ss_pred cCcccCCCcc--------eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEc
Q psy11131 93 DGRQIPGRTS--------STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLG 140 (150)
Q Consensus 93 ~~~~~~~~~~--------~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~ 140 (150)
++..+..... ...|.|.++..+|.|.|.|.+.|..| .....+.|.|+
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g-~~~~~~~l~V~ 194 (194)
T 2a38_A 140 DGAEIQSSLDFQISQEGDLYSLLIAEAYPEDSGTYSVNATNSVG-RATSTAELLVQ 194 (194)
T ss_dssp TTEECCCSSSEEEEEETTEEEEEEEEECGGGCEEEEEEEEETTE-EEEEEEEEEEC
T ss_pred CCEECCCCCcEEEEEcCCEEEEEECCCChhcCeEEEEEEEeCCC-ceEEEEEEEEC
Confidence 9887764433 23789999999999999999999998 57777777763
No 15
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.87 E-value=1.3e-20 Score=117.50 Aligned_cols=132 Identities=26% Similarity=0.393 Sum_probs=104.0
Q ss_pred CCCCceEEeCCeEEEcCCCCCCCeEEEEEeccCCc--ceeEEEEEEEecCceEEeCCCcEEEecCCcEEEEEE-ec-CCC
Q psy11131 7 LPGPRTRVLGPILAIEGVTAEDSGTYRCSSSNIGG--EATAEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCE-IT-PYD 82 (150)
Q Consensus 7 ~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~--~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~-~~-~p~ 82 (150)
..+.|+.+...+|.|.+++.+|+|.|+|.+.+..| .....+.|.|..+|.....+....+.+|+.+.|.|. .. .|
T Consensus 55 ~~~~r~~~~~~~L~i~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p- 133 (212)
T 1f97_A 55 PYADRVTFSSSGITFSSVTRKDNGEYTCMVSEEGGQNYGEVSIHLTVLVPPSKPTISVPSSVTIGNRAVLTCSEHDGSP- 133 (212)
T ss_dssp GGTTTEEEETTEEEESCCCGGGCEEEEEEEEETTSSSEEEEEEEEEEEBCCCCCEEECCSEEETTSCEEEEEECSCCBS-
T ss_pred cccCcEEeeceeEEEcccCcccCeEEEEEEEccCCCcccEEEEEEEEEcCCCCcccCCccccCCCCeEEEEEEcccCcC-
Confidence 34577777779999999999999999999998765 456778888887765543333456789999999999 56 88
Q ss_pred CCCcEEEEeecCc-ccCCCc---------------ceeeEEEccCCCCCCceEEEEEEeCCCCc-eeeeEEEEEcC
Q psy11131 83 SGPYLIAWFKDGR-QIPGRT---------------SSTSLVINPVGREDRGIYQCIARRSDGDV-AQGSAELQLGG 141 (150)
Q Consensus 83 ~~~~~~~w~~~~~-~~~~~~---------------~~~~l~~~~~~~~~~g~y~C~~~~~~g~~-~~~~~~l~v~~ 141 (150)
.+.+.|++++. .+.... ....|.|.++..+|.|.|.|.+.|..|.. .+..+.|.|.+
T Consensus 134 --~~~i~W~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~l~V~~ 207 (212)
T 1f97_A 134 --PSEYSWFKDGISMLTADAKKTRAFMNSSFTIDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDAVE 207 (212)
T ss_dssp --CCEEEEEETTEESBC-----CBSCSSSCEEECTTTCCEEESSCCGGGCEEEEEEEECSSSCCEECCCEEEEEES
T ss_pred --CCEEEEEeCCcccccccccccccccCceeEecCCCceEEEEecChhhCcEEEEEEccccCCccccceEEEEEEE
Confidence 89999999988 664321 14679999999999999999999999843 36677777764
No 16
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.87 E-value=1.6e-21 Score=121.46 Aligned_cols=109 Identities=14% Similarity=0.172 Sum_probs=87.4
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCc
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGR 95 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~ 95 (150)
..|.|.+++.+|+|.|+|.+.|..|..+..+.|.|..+|.+...+....+.+|+.+.|.|.+. .| .|.+.|.+++.
T Consensus 69 ~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~p~~~~~~~~~~~v~~g~~~~l~C~~~G~P---~P~v~W~~~~~ 145 (203)
T 4fa8_A 69 FFLVVTAANISHDGNYLCRMKLGETEVTKQEHLSVVKPLTLSVHSERSQFPDFSVLTVTCTVNAFP---HPHVQWLMPEG 145 (203)
T ss_dssp EEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEEEEEECCSSCSCCEEEEEEEEEES---CCEEEECCC--
T ss_pred EEEEEccCCHHHCeEEEEEEEcCCCcEEEEEEEEecCCceeeecceeEEEcCCCEEEEEEEcCCCC---CCEEEEEECCe
Confidence 469999999999999999999998988999999999887776666556677899999999999 99 99999987654
Q ss_pred ccCCC----cc-----e---eeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 96 QIPGR----TS-----S---TSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 96 ~~~~~----~~-----~---~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
.+... .+ . ..+.+.++..+|.|.|+|.|.|..|
T Consensus 146 ~~~~~~~~~~r~~~~~~g~l~il~i~~v~~~D~G~YtC~A~N~~G 190 (203)
T 4fa8_A 146 VEPAPTAANGGVMKEKDGSLSVAVDLSLPKPWHLPVTCVGKNDKE 190 (203)
T ss_dssp ----------CCEECTTSCEEEEEEEEECSSCCCCEEEEEESSSC
T ss_pred eecCcccccceEEEeCCCCEEEEEECCCCHHHCEEEEEEEEcCCC
Confidence 33211 11 2 3345568889999999999999999
No 17
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.86 E-value=6.3e-21 Score=118.90 Aligned_cols=123 Identities=16% Similarity=0.293 Sum_probs=97.2
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCceEEeCCCcEEEecCCcEEEEEEec--CCCCCCcEEEEeecC
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCEIT--PYDSGPYLIAWFKDG 94 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~--~p~~~~~~~~w~~~~ 94 (150)
+.|.|.+++.+|+|.|+|.+.+. ..+..+.|.|..++.+...+. ..+.+|+.+.|.|.+. .| .+.+.|++++
T Consensus 54 ~~L~i~~v~~~D~G~Y~C~a~n~--~~s~~~~l~V~~~p~~~~~~~-~~v~~G~~v~L~C~~~~~~p---~~~v~W~k~g 127 (204)
T 3sgj_C 54 SSYFIDAATVDDSGEYRCQTQLS--TLSDPVQLEVHIGWLLLQAPR-WVFKEEDPIHLRCHSWKNTA---LHKVTYLQNG 127 (204)
T ss_dssp SEEEESSCCGGGCEEEEEEETTS--BCCCCEEEEEECSSEEEECSC-SEEETTCCEEEEEEEGGGCC---CEEEEEEETT
T ss_pred cEEEEecccccCCEEEEEEeCCC--cccccEEEEEecCceEecCCc-eeEeCCCcEEEEEEecCCCC---CceEEEEECC
Confidence 68999999999999999999874 345567788887766555444 5678999999999997 46 7899999998
Q ss_pred cccCCCcceeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCcCcc
Q psy11131 95 RQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGTRNI 145 (150)
Q Consensus 95 ~~~~~~~~~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p~~ 145 (150)
..+........|.|.++..+|.|.|.|.+.|..+...+..+.|.|.++|+.
T Consensus 128 ~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~ 178 (204)
T 3sgj_C 128 KGRKYFHHNSDFYIPKATLKDSGSYFCRGLVGSKNVSSETVQITITQGLAV 178 (204)
T ss_dssp EEEEEEEECCCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC----
T ss_pred cEeecccCCceEEECcCCcccCEEEEEEEEeCCCceecCcEEEEEeCcCCC
Confidence 876433336789999999999999999999965546777889998876543
No 18
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.86 E-value=2.2e-20 Score=115.33 Aligned_cols=120 Identities=25% Similarity=0.385 Sum_probs=99.6
Q ss_pred eEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCceEEeCC-----CcEEEecCCcEEEEEEec-CCCCCCcEEEEe
Q psy11131 18 ILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVDVNP-----PLLSVHLDGSANFQCEIT-PYDSGPYLIAWF 91 (150)
Q Consensus 18 ~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~-----~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~ 91 (150)
.|.|.+++.+|+|.|+|.+.+..+.....+.|.|..++.+...+ ....+.+|+.+.|.|.+. .| .+.+.|+
T Consensus 63 ~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p---~p~i~W~ 139 (197)
T 2j8h_A 63 QLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKP---DPVITWQ 139 (197)
T ss_dssp EEEECSCCGGGCSEEEEEEEETTEEEEEEEEEEEEEEEEECCSSCBTTBEEEEEETTCCCEEEEEEEEES---CCEEEEE
T ss_pred EEEECcCCHHhCEEEEEEEEECCCceeEEEEEEEcCCCcCCCCccccccCeEEEeCCCEEEEEEEEEecC---CCcEEEE
Confidence 89999999999999999999988888888889988765543322 345678899999999999 88 8999999
Q ss_pred ecCcccCCCcc--------eeeEEEcc-CCCCCCceEEEEEEeCCCCceeeeEEEEEcC
Q psy11131 92 KDGRQIPGRTS--------STSLVINP-VGREDRGIYQCIARRSDGDVAQGSAELQLGG 141 (150)
Q Consensus 92 ~~~~~~~~~~~--------~~~l~~~~-~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~ 141 (150)
+++..+..... ...|.+.+ +..+|.|.|.|.+.|..| ..+..+.|.|.+
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N~~g-~~~~~~~l~V~d 197 (197)
T 2j8h_A 140 KGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFG-IDQKTVELDVAD 197 (197)
T ss_dssp ESSCEECSSSSCEEEECSSEEEEECTTCCCGGGCEEEEEEEEETTE-EEEEEEEEEEEC
T ss_pred ECCEEeecCCCEEEEEcCCceEEEEeCCCCcccCEeEEEEEEeCCC-cEeEEEEEEEeC
Confidence 99887654332 36888999 999999999999999999 577788887753
No 19
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.86 E-value=4.9e-20 Score=113.74 Aligned_cols=118 Identities=16% Similarity=0.243 Sum_probs=98.9
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCccee-EEEEEEEecCceEEeCCCcEEEecCCcEEEEEEec-CCCCCCc-EEEEeec
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEAT-AEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPY-LIAWFKD 93 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~-~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~-~~~w~~~ 93 (150)
+.|.|.+++..|+|.|+|.+.+..+... ..+.|.|..+|.+...+....+.+|+.+.|.|.+. .| .+ .+.|+++
T Consensus 68 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p---~p~~v~W~~~ 144 (195)
T 2c5d_C 68 SQLRITSLQLSDTGQYQCLVFLGHQTFVSQPGYVGLEGLPYFLEEPEDRTVAANTPFNLSCQAQGPP---EPVDLLWLQD 144 (195)
T ss_dssp EEEEESSCCSTTCEEEEEEEEETTEEEECCCEEEEECCSCEEEECCCCEEECTTCCEEEEEEEECSS---CCCEEEEEES
T ss_pred cEEEEEeccccCCcEEEEEEEeCCCceecccEEEEEecCCeEEcCCCcEEEcCCCEEEEEeECCCCC---CCCEEEEEEC
Confidence 4799999999999999999999766543 34889999888888777778899999999999999 88 88 9999999
Q ss_pred CcccCCCc---ceeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEE
Q psy11131 94 GRQIPGRT---SSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQL 139 (150)
Q Consensus 94 ~~~~~~~~---~~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v 139 (150)
+..+.... ....|.|.++. |.|.|.|.+.|..|...+..+.|.|
T Consensus 145 ~~~~~~~~~~~~~~~L~i~~~~--d~G~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 145 AVPLATAPGHGPQRSLHVPGLN--KTSSFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp SCBSSSSTTSSCCEEEEECCCS--SCEEEEEEEEETTEEEECCCEEEEE
T ss_pred CEeccCCCCcCCCCeEEEcccc--cCceEEEEEEcCCCceEEEEEEEEE
Confidence 88776443 25788888876 7899999999999843347888888
No 20
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.86 E-value=1.6e-19 Score=117.20 Aligned_cols=126 Identities=27% Similarity=0.472 Sum_probs=107.0
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCceEEeCC-CcEEEecCCcEEEEEEec-CCCCCCcEEEEeecC
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVDVNP-PLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDG 94 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~-~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~ 94 (150)
..|.|.+++..|+|.|+|.+.+..+..+..+.|.|..+|.+.... ....+.+|+.+.|.|.+. .| .+.+.|++++
T Consensus 61 ~~L~i~~v~~~d~G~Y~C~~~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p---~~~v~W~~~~ 137 (284)
T 2rik_A 61 ATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSP---EIKVLWYKDE 137 (284)
T ss_dssp EEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCEEEECCCSEEEEETTCCEEEEEEEESSS---CCEEEEEETT
T ss_pred EEEEEecCCcccCEEEEEEEEECCceEEEEEEEEccCCCcccccCCCceEecCCceEEEEEEEeeeC---CCEEEEEECC
Confidence 689999999999999999999988888888999999887765543 345678999999999999 88 8999999998
Q ss_pred cccCCCcc--------eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCcCccc
Q psy11131 95 RQIPGRTS--------STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGTRNIK 146 (150)
Q Consensus 95 ~~~~~~~~--------~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p~~~ 146 (150)
..+..... ...|.|.++..+|.|.|.|.+.|..| .....+.|.|..+|...
T Consensus 138 ~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g-~~~~~~~l~V~~~p~~~ 196 (284)
T 2rik_A 138 TEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAG-SASSSTSLKVKEPPVFR 196 (284)
T ss_dssp EECCCSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSC-EEEEEEEEEEECCCBCC
T ss_pred EECcCCCcEEEEEcCCEEEEEECCCCcccCEEEEEEEEcCCC-ceeEEEEEEEecCCcce
Confidence 87654432 46799999999999999999999988 57788888888776543
No 21
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.86 E-value=2.5e-20 Score=126.32 Aligned_cols=121 Identities=20% Similarity=0.331 Sum_probs=106.6
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCc
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGR 95 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~ 95 (150)
+.|.|.+++.+|+|.|+|.+.|..|.....+.|.|..+|.+...+....+.+|+.+.|.|.+. .| .+.+.|++++.
T Consensus 275 ~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p---~p~v~W~~~g~ 351 (404)
T 3p3y_A 275 KALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNP---KPTVQWMVNGE 351 (404)
T ss_dssp TEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEEEECCCCEEECTTCCEEEECEEEEES---CCEEEEEETTE
T ss_pred ceEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEEEeCCCeeeccCCcceeecCCcEEEEEEccccC---CCceEEEECCE
Confidence 789999999999999999999998988889999999988888778878899999999999999 88 89999999988
Q ss_pred ccCCCcc-------eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcC
Q psy11131 96 QIPGRTS-------STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGG 141 (150)
Q Consensus 96 ~~~~~~~-------~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~ 141 (150)
.+..... ...|.|.++..+|.|.|.|.+.|..| .....+.|.|.+
T Consensus 352 ~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G-~~~~~~~l~V~d 403 (404)
T 3p3y_A 352 PLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHG-YLLANAFVSVLD 403 (404)
T ss_dssp EGGGSCCCTTEEEETTEEEESSCCSSCCCEEEEEEEETTE-EEEEEEEEEEC-
T ss_pred ecCCCCCCceEEecCCEEEEeecCHHHCEEEEEEEEeCCC-cEEEEEEEEEEe
Confidence 7654321 45799999999999999999999999 677888887764
No 22
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.86 E-value=4.5e-20 Score=115.30 Aligned_cols=115 Identities=23% Similarity=0.351 Sum_probs=87.6
Q ss_pred eEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEe---------------------cCceEEeCCCcEEEecCCcEEEEE
Q psy11131 18 ILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVS---------------------TPYRVDVNPPLLSVHLDGSANFQC 76 (150)
Q Consensus 18 ~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~---------------------~~~~~~~~~~~~~~~~g~~~~l~C 76 (150)
+|.|.+++.+|+|.|+|.+.| |.......+.+. .+|.+.... ...+.+|+.+.|.|
T Consensus 62 ~L~I~~v~~~D~G~Y~C~a~N--g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~-~~~v~~g~~v~l~C 138 (207)
T 3rbs_A 62 EMFMEKLQDEDEGTYTFQLQD--GKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYL-SWEVTGECNVLLKC 138 (207)
T ss_dssp EEEESCCCGGGCEEEEEEEEE--TTEEEEEEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEE-EEEEETTTEEEEEE
T ss_pred EEEECCCChhhCEEEEEEEEC--CCeEEEEEEEEEccchhhhcccccccccccccCCCCceEecC-CcEEcCCCcEEEEE
Confidence 699999999999999999998 444444443321 123332222 35678999999999
Q ss_pred Eec-C-CCCCCcEEEEeecCcccCCCcc------eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEE
Q psy11131 77 EIT-P-YDSGPYLIAWFKDGRQIPGRTS------STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQL 139 (150)
Q Consensus 77 ~~~-~-p~~~~~~~~w~~~~~~~~~~~~------~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v 139 (150)
.+. . | .|.+.|++++..+..... ...|.|.++..+|.|.|.|.+.|..| ..+..+.|..
T Consensus 139 ~v~g~~P---~p~i~W~k~g~~l~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G-~~~~~~~L~~ 205 (207)
T 3rbs_A 139 KVANIKK---ETHIVWYKDEREISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRG-KDKSRLKLVD 205 (207)
T ss_dssp EEESCCT---TCEEEEEETTEEECCCCCCCCSSEEEEEEETTCCGGGCEEEEEEEEETTE-EEEEEEEECC
T ss_pred EEeCCCC---CCEEEEEECCEECCCCCceEcCCCEEEEEECCCCcccCEEEEEEEEcCCC-EEEEEEEEec
Confidence 998 7 8 999999999987754322 34699999999999999999999999 5666666643
No 23
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.86 E-value=2.6e-20 Score=131.71 Aligned_cols=132 Identities=23% Similarity=0.371 Sum_probs=109.9
Q ss_pred ecCCCCceEEeC----CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCceEEeCCCcEEEecCCcEEEEEEec-
Q psy11131 5 LVLPGPRTRVLG----PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCEIT- 79 (150)
Q Consensus 5 ~~~~~~~~~~~~----~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~- 79 (150)
++..+.++.+.. .+|.|.++..+|+|.|+|.+.|..|.....+.|.|..+|.+...+....+.+|+.+.|.|.+.
T Consensus 424 ~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~v~~~P~~~~~~~~~~~~~g~~~~l~c~~~g 503 (570)
T 3b43_A 424 ELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSDTCVGSITLKAPPRFVKKLSDISTVVGEEVQLQATIEG 503 (570)
T ss_dssp ECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECCCCEEEECCCCBCCBTTCCEEEEEEEES
T ss_pred ECcCCCCEEEEEcCCEEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEeccCCcccccCCCceecCCCeEEEEEEEec
Confidence 344555655543 479999999999999999999999999999999999998888777777788999999999999
Q ss_pred CCCCCCcEEEEeecCcccCC-Ccc--------eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEc
Q psy11131 80 PYDSGPYLIAWFKDGRQIPG-RTS--------STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLG 140 (150)
Q Consensus 80 ~p~~~~~~~~w~~~~~~~~~-~~~--------~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~ 140 (150)
.| .+.+.|++++..+.. ... ...|.|..+..+|.|.|.|.|.|..| ..+..+.|.|.
T Consensus 504 ~p---~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G-~~~~~a~L~V~ 569 (570)
T 3b43_A 504 AE---PISVAWFKDKGEIVRESDNIWISYSENIATLQFSRAEPANAGKYTCQIKNEAG-TQECFATLSVL 569 (570)
T ss_dssp CS---SCCCEEEETTEECCCCTTTEEECCCSSEEEEEESSCCTTCCEEEEEEEECSSC-EEEEEEEECCB
T ss_pred CC---CCEEEEEeCCeEeccCCCeEEEEECCCEEEEEECcCCHHHCEEEEEEEEECCc-EEEEEEEEEEe
Confidence 88 899999998754422 111 46899999999999999999999999 67788888764
No 24
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.86 E-value=6.8e-20 Score=123.73 Aligned_cols=132 Identities=24% Similarity=0.383 Sum_probs=109.9
Q ss_pred CCceEEeC----CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCceEEeCCCcEEEecCCcEEEEEEec-CCCC
Q psy11131 9 GPRTRVLG----PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCEIT-PYDS 83 (150)
Q Consensus 9 ~~~~~~~~----~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~ 83 (150)
+.|+.+.. +.|.|.++..+|+|.|+|.+.|..|..+..+.|.|..+|.+...+....+.+|+.+.|.|.+. .|
T Consensus 51 ~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p-- 128 (389)
T 2jll_A 51 DGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIGGHQKSMYLDIEYAPKFISNQTIYYSWEGNPINISCDVKSNP-- 128 (389)
T ss_dssp SSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEECCSCCEEEECTTCCEEEEECEEEES--
T ss_pred CCeEEEeccCCcceEEEcccChhhCEEEEEEEEeCCCCcceEEEEEEEeCCEEecCcceEEeccCCEEEEEEEEEecC--
Confidence 46666652 689999999999999999999998988889999999888776655555778999999999999 89
Q ss_pred CCcEEEEeecCcccCCCcc----------eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCcCc
Q psy11131 84 GPYLIAWFKDGRQIPGRTS----------STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGTRN 144 (150)
Q Consensus 84 ~~~~~~w~~~~~~~~~~~~----------~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p~ 144 (150)
.+.+.|.+++..+..... ...|.|.++...|.|.|.|.+.|..| .....+.+.+..+|.
T Consensus 129 -~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G-~~~~~~~l~v~~~P~ 197 (389)
T 2jll_A 129 -PASIHWRRDKLVLPAKNTTNLKTYSTGRKMILEIAPTSDNDFGRYNCTATNHIG-TRFQEYILALADVPS 197 (389)
T ss_dssp -CCEEEEEETTEESSCTTCTTEEEEECSSCEEEEECCCSTTSSEEEEEEEEETTE-EEEEEEEEEECCCCC
T ss_pred -CCeEEEEECCccCCcccCceEEEeccCCEEEEEECCCChhhCEEEEEEEEcCCC-cEEEEEEEEecCCCC
Confidence 899999999887754321 34699999999999999999999999 466677777766553
No 25
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.86 E-value=8.3e-20 Score=112.58 Aligned_cols=131 Identities=15% Similarity=0.261 Sum_probs=104.6
Q ss_pred CCCCceEEeC----CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCceEEeC---CCcEEEecCCcEEEEEEec
Q psy11131 7 LPGPRTRVLG----PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVDVN---PPLLSVHLDGSANFQCEIT 79 (150)
Q Consensus 7 ~~~~~~~~~~----~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~---~~~~~~~~g~~~~l~C~~~ 79 (150)
..+.++.+.. .+|.|.+++.+|+|.|+|.+.+..+.......|.|..+|..... +....+.+|+.+.|.|.+.
T Consensus 49 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~C~~~ 128 (197)
T 3lcy_A 49 IQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIATNEVGEVETSSKLLLQATPQFHPGYPLKEKYYGAVGSTLRLHVMYI 128 (197)
T ss_dssp CCCSSEEEEESSSEEEEEEECCSGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEECTTSCCCSEEEEETTSCEEEEEEEE
T ss_pred CCCccEEEEeCCCEEEEEEecCCccCCEEEEEEEECCCCceeEEEEEEEEcCCCCCCCccCCcceeecCCCeEEEEEEEe
Confidence 3445555444 27999999999999999999998888888888888876655432 2445678999999999999
Q ss_pred -CCCCCCcEEEEeecCcccCCCcc--------eeeEEEccCCC-CCCceEEEEEEeCCCCceeeeEEEEEcC
Q psy11131 80 -PYDSGPYLIAWFKDGRQIPGRTS--------STSLVINPVGR-EDRGIYQCIARRSDGDVAQGSAELQLGG 141 (150)
Q Consensus 80 -~p~~~~~~~~w~~~~~~~~~~~~--------~~~l~~~~~~~-~~~g~y~C~~~~~~g~~~~~~~~l~v~~ 141 (150)
.| .+.+.|++++..+..... ...|.|.++.. +|.|.|.|.+.|..| .....+.|.|.+
T Consensus 129 ~~p---~p~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~n~~g-~~~~~~~l~V~~ 196 (197)
T 3lcy_A 129 GRP---VPAMTWFHGQKLLQNSENITIENTEHYTHLVMKNVQRKTHAGKYKVQLSNVFG-TVDAILDVEIQD 196 (197)
T ss_dssp EES---CCEEEEEETTEECCCCSSEEEEECSSEEEEEESSCCHHHHCEEEEEEEECSSC-EEEEEEEEEEEC
T ss_pred eee---CCeeEEeECCEECCCCCceEEEEcCCEEEEEEccccchhhCceEEEEEEcCcC-ceEEEEEEEEec
Confidence 88 899999999887765433 26799999985 899999999999999 577888887754
No 26
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.86 E-value=5.1e-20 Score=112.46 Aligned_cols=119 Identities=24% Similarity=0.414 Sum_probs=99.2
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcc-eeEEEEEEEecCceEEeCCCcEEEecCCcEEEEEEec-CCCCCCc-EEEEeec
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGE-ATAEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPY-LIAWFKD 93 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~-~~~w~~~ 93 (150)
+.|.|.+++.+|+|.|+|.+.+..+. .+..+.|.|..+|.+...+....+.+|+.+.|.|.+. .| .+ .+.|+++
T Consensus 60 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p---~p~~v~W~~~ 136 (182)
T 1rhf_A 60 GFLSLKSVERSDAGRYWCQVEDGGETEISQPVWLTVEGVPFFTVEPKDLAVPPNAPFQLSCEAVGPP---EPVTIVWWRG 136 (182)
T ss_dssp EEEEESSCCGGGCEEEEEEESSCTTCEECCCEEEEEECSCEEEECCCCEEECTTCCEEEEEEEECSS---SCCEEEEEET
T ss_pred EEEEEeecCcccCeEEEEEEEcCCCcEEEEEEEEEEecCCeEEecCcceEecCCCEEEEEeEecCCC---CCCEEEEEcC
Confidence 57999999999999999999987654 4567889999988888877778899999999999999 88 88 9999999
Q ss_pred CcccCCCcc-eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEc
Q psy11131 94 GRQIPGRTS-STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLG 140 (150)
Q Consensus 94 ~~~~~~~~~-~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~ 140 (150)
+..+..... ...|.+.++ +|.|.|.|.+.|..|...+.++.|.|.
T Consensus 137 ~~~~~~~~~~~~~L~i~~~--~d~G~Y~C~a~N~~g~~~s~~~~l~Vk 182 (182)
T 1rhf_A 137 TTKIGGPAPSPSVLNVTGV--TQSTMFSCEAHNLKGLASSRTATVHLQ 182 (182)
T ss_dssp TEECSCSEESSEEEEECCC--SSCEEEEEEEEETTEEEECCCEEEEEC
T ss_pred CeECCCCCCCceEEEEecc--ccCeEEEEEEECCCCCcccceEEEEeC
Confidence 887754432 567888877 588999999999998433457777763
No 27
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.86 E-value=6.2e-20 Score=119.41 Aligned_cols=138 Identities=21% Similarity=0.306 Sum_probs=106.8
Q ss_pred cCCCCceEEeC-CeEEEcCCCCCCCeEEEEEec-cCCcceeEEEEEEEe----cCceEEeCCCcEEEecCCcEEEEEEec
Q psy11131 6 VLPGPRTRVLG-PILAIEGVTAEDSGTYRCSSS-NIGGEATAEVRLQVS----TPYRVDVNPPLLSVHLDGSANFQCEIT 79 (150)
Q Consensus 6 ~~~~~~~~~~~-~~l~i~~~~~~d~G~Y~C~~~-~~~~~~~~~~~l~v~----~~~~~~~~~~~~~~~~g~~~~l~C~~~ 79 (150)
+..+.++.+.. +.|.|.+++.+|+|.|+|.+. +..+..+..+.|.|. .+|.+...+....+.+|+.+.|.|.+.
T Consensus 132 ~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~~~l~C~~~ 211 (289)
T 3ejj_X 132 VLRKTVYFFSPWRGFIIRKAKVLDSNTYVCKTMVNGRESTSTGIWLKVNRVHPEPPQIKLEPSKLVRIRGEAAQIVCSAT 211 (289)
T ss_dssp CCTTCCEEEETTTEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEESSCCCCCEEEEESSSEECCSSSCEEEEEEEE
T ss_pred cCCCccEEECCCCCEEEeecccccCEEEEEEEEeCCCccccccEEEEEEECCCCCCeEEecCCceEEEeCCcEEEEEEeC
Confidence 34556666655 789999999999999999998 444556677888887 466666666666678999999999998
Q ss_pred --CCCCCCcEEEEeecCcccCCCcc----------eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCcCcccc
Q psy11131 80 --PYDSGPYLIAWFKDGRQIPGRTS----------STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGTRNIKH 147 (150)
Q Consensus 80 --~p~~~~~~~~w~~~~~~~~~~~~----------~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p~~~~ 147 (150)
.| .+.+.|++++..+..... ...|.|.++..+|.|.|.|.+.|..| ....++.|.+..+++...
T Consensus 212 ~~~p---~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G-~~~~s~~L~~~~~~~~~~ 287 (289)
T 3ejj_X 212 NAEV---GFNVILKRGDTKLEIPLNSDFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVG-TRTATMNFQVVESHHHHH 287 (289)
T ss_dssp ESSS---CCEEEEEETTEECCCCEEEEECSSSEEEEEEEEESSCCSSSCEEEEEEEECSSC-EEEEEEEEECC-------
T ss_pred CCCC---ceEEEEEECCEEeeccCCcccccceEEeeEEEEEEeecccCCEEEEEEEEcCCC-CccccEEEEEEecccccc
Confidence 57 899999999887654211 56899999999999999999999999 688888888877766543
No 28
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.86 E-value=4.3e-20 Score=116.07 Aligned_cols=122 Identities=19% Similarity=0.258 Sum_probs=102.4
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcce-eEEEEEEEecC---------------ceEEeCCCcEEEecCCcEEEEEEec-
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEA-TAEVRLQVSTP---------------YRVDVNPPLLSVHLDGSANFQCEIT- 79 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~v~~~---------------~~~~~~~~~~~~~~g~~~~l~C~~~- 79 (150)
..|.|.+++..|+|.|+|.+.+..+.. +..+.|.|... +.+...+....+.+|+.+.|.|.+.
T Consensus 65 ~~L~i~~v~~~d~G~Y~C~~~n~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~v~L~C~~~g 144 (218)
T 3k0w_A 65 SELIFNAVHVKDAGFYVCRVNNNFTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCVAVG 144 (218)
T ss_dssp SEEEETTCCGGGCEEEEEEEECTTCCEECCCEEEEEECCCGGGCTTCCSBCCSSCEEEECCCCEEECTTCCEEEECEEEB
T ss_pred CEEEEccCChhhCeEeEEEEEcCCCCceeeEEEEEEEccCcccccccccccCCCceEEECCCceeecCCCcEEEEEEecc
Confidence 689999999999999999999876643 55577888754 4556666777889999999999999
Q ss_pred CCCCCCcEEEEeecCcccCCCcceeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCc
Q psy11131 80 PYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGT 142 (150)
Q Consensus 80 ~p~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~ 142 (150)
.| .+.+.|++++..+.... ...|.|.++...|.|.|.|.+.|..|...+..+.|.|.+.
T Consensus 145 ~p---~~~v~W~~~~~~~~~~~-~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~ 203 (218)
T 3k0w_A 145 SP---IPHYQWFKNELPLTHET-KKLYMVPYVDLEHQGTYWCHVYNDRDSQDSKKVEIIIDEL 203 (218)
T ss_dssp SS---CCEEEEEETTEECTTCC-SSEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEECC-
T ss_pred cC---CCeEEEEECCEECCCCC-CCEEEEeecChhcCEEEEEEEEcCCCCceeeeEEEEEeCC
Confidence 88 89999999998776554 5689999999999999999999988855778888888764
No 29
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.85 E-value=7.5e-20 Score=112.16 Aligned_cols=129 Identities=22% Similarity=0.374 Sum_probs=100.7
Q ss_pred CCCceEEeC-CeEEEcCCCCCCCeEEEEEeccCCcc--eeEEEEEEEecCceEEeCCC--cEEEecCCcEEEEEEec-CC
Q psy11131 8 PGPRTRVLG-PILAIEGVTAEDSGTYRCSSSNIGGE--ATAEVRLQVSTPYRVDVNPP--LLSVHLDGSANFQCEIT-PY 81 (150)
Q Consensus 8 ~~~~~~~~~-~~l~i~~~~~~d~G~Y~C~~~~~~~~--~~~~~~l~v~~~~~~~~~~~--~~~~~~g~~~~l~C~~~-~p 81 (150)
.+.++.... ++|.|.+++.+|+|.|+|.+.+..+. ......+.|..+|.+...+. ...+.+|+.+.|.|.+. .|
T Consensus 47 ~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p 126 (189)
T 2v5t_A 47 SDNRFAMLANNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSP 126 (189)
T ss_dssp CCTTEEECTTSCEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEEEEEEEECSCCEEEEETTSCCCEEEECEEEEES
T ss_pred cCCeEEEecCCCEEEeeCCHhHCcEEEEEEEEcCCCceEEEEEEEEecCCCCcccccccccccccCCCcEEEEEEEccCC
Confidence 345666555 78999999999999999999887543 23456677777666655443 34556799999999999 88
Q ss_pred CCCCcEEEEeecCcccCCCcc------eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEc
Q psy11131 82 DSGPYLIAWFKDGRQIPGRTS------STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLG 140 (150)
Q Consensus 82 ~~~~~~~~w~~~~~~~~~~~~------~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~ 140 (150)
.+.+.|++++..+..... ...|.|.++..+|.|.|.|.+.|..| .....+.|.|.
T Consensus 127 ---~~~v~W~~~g~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g-~~~~~~~l~V~ 187 (189)
T 2v5t_A 127 ---EPAISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGPYVCRATNKAG-EDEKQAFLQVF 187 (189)
T ss_dssp ---CCEEEEEETTEECCCSSSEEEETTTTEEEECSCCGGGCEEEEEEEEETTE-EEEEEEEEEEE
T ss_pred ---CCeEEEEECCEECcCCCcEEEecCCCEEEEcCCChhhCeeEEEEEEeCCC-ceeEEEEEEEE
Confidence 889999999887764432 45799999999999999999999998 56677777764
No 30
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.85 E-value=5.9e-20 Score=112.91 Aligned_cols=109 Identities=21% Similarity=0.406 Sum_probs=94.2
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCC-cceeEEEEEEEecCceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecC
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIG-GEATAEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDG 94 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~-~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~ 94 (150)
..|.|.+++.+|+|.|+|.+.+.. +.....+.|.|..+|.+...+....+.+|+.+.|.|.+. .| .+.+.|++++
T Consensus 62 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p---~~~v~W~~~~ 138 (191)
T 1epf_A 62 STLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSL---PPTIIWKHKG 138 (191)
T ss_dssp EEEEECSCCGGGCEEEEEEEEETTTEEEEEEEEEEEECCSEEEECCSSEECCTTSCEEECCEEECSS---CCEEEEEETT
T ss_pred eEEEEccCCcccCEEEEEEEEcCCCcceEEEEEEEeecCceEecCCCcEeecCCCeEEEEEEECCCC---CCEEEEEECC
Confidence 689999999999999999999876 456778888888888887777778889999999999999 88 8999999998
Q ss_pred cccCCCc--c-----eeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 95 RQIPGRT--S-----STSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 95 ~~~~~~~--~-----~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
..+.... . ...|.|.++..+|.|.|.|.+.|..+
T Consensus 139 ~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~ 179 (191)
T 1epf_A 139 RDVILKKDVRFIVLSNNYLQIRGIKKTDEGTYRCEGRILAR 179 (191)
T ss_dssp EEGGGGCCTTEEECTTSCEEETTCCGGGCEEEEEEEEEGGG
T ss_pred EEeeccCCceEEEecCCeEEECCCChhhCEEEEEEEEEecc
Confidence 7764321 1 34899999999999999999999875
No 31
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.85 E-value=2.9e-20 Score=121.05 Aligned_cols=136 Identities=22% Similarity=0.356 Sum_probs=101.5
Q ss_pred CCceEEeC-CeEEEcCCCCCCCeEEEEEeccCCcc--eeEEEEEEEecCceEEeCCC--cEEEecCCcEEEEEEec-CCC
Q psy11131 9 GPRTRVLG-PILAIEGVTAEDSGTYRCSSSNIGGE--ATAEVRLQVSTPYRVDVNPP--LLSVHLDGSANFQCEIT-PYD 82 (150)
Q Consensus 9 ~~~~~~~~-~~l~i~~~~~~d~G~Y~C~~~~~~~~--~~~~~~l~v~~~~~~~~~~~--~~~~~~g~~~~l~C~~~-~p~ 82 (150)
+.++.... +.|.|.+++.+|+|.|+|.+.+..+. ......+.|..+|.+...+. ...+.+|+.+.|.|.+. .|
T Consensus 144 ~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p- 222 (291)
T 2wim_A 144 DNRFAMLANNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSP- 222 (291)
T ss_dssp CSSEEECTTSCEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEEBCCCCBCSCSEEECCSSSCCEEEEECBCCCBS-
T ss_pred CceEEEccCCCEEEEecchhhCEEEEEEEEECCCCeeEEeeEEEEeccCCccccCcccccceecCCCeEEEEEEeecCC-
Confidence 45555544 78999999999999999999987543 33556777777766554433 23456899999999999 88
Q ss_pred CCCcEEEEeecCcccCCCcc------eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCcCccccc
Q psy11131 83 SGPYLIAWFKDGRQIPGRTS------STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGTRNIKHY 148 (150)
Q Consensus 83 ~~~~~~~w~~~~~~~~~~~~------~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p~~~~~ 148 (150)
.+.+.|++++..+..... ...|.|.++..+|.|.|.|.+.|..| .....+.|.|..+++-+.|
T Consensus 223 --~p~v~W~~~g~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G-~~~~~~~l~v~~~~~~~~~ 291 (291)
T 2wim_A 223 --EPAISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGPYVCRATNKAG-EDEKQAFLQVFVQHHHHHH 291 (291)
T ss_dssp --CCEEEEEETTEECCCTTTEEECSTTCEEEEESCCSTTCEEEEEEEEETTE-EEEEEEEEEC---------
T ss_pred --CCeEEEEECCEECcCCccEEEcCCccEEEEeeCCcccCEEEEEEEEECCC-ceeeeEEEEEEEeccccCC
Confidence 899999999887764432 46799999999999999999999999 6889999999998876543
No 32
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.85 E-value=4.1e-20 Score=124.58 Aligned_cols=120 Identities=27% Similarity=0.471 Sum_probs=106.5
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCc
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGR 95 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~ 95 (150)
..|.|.+++.+|+|.|+|.+.|..|.....+.|.|..+|.+...+....+.+|+.+.|.|.+. .| .+.+.|++++.
T Consensus 257 ~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p---~p~v~W~~~g~ 333 (382)
T 1cs6_A 257 PLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIHAQPDWLDVITDTEADIGSDLRWSCVASGKP---RPAVRWLRDGQ 333 (382)
T ss_dssp SEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEEEETTCCEEEECEEEEES---CCEEEEEETTE
T ss_pred cEEEEccCChhhCEEEEEEEEcCCCeEEEEEEEEEecCCCcccCCCccEEcCCCeEEEEEEeeeec---CCEEEEEECCE
Confidence 789999999999999999999998888888999999888887777778889999999999999 88 89999999998
Q ss_pred ccCCCcc----eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEc
Q psy11131 96 QIPGRTS----STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLG 140 (150)
Q Consensus 96 ~~~~~~~----~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~ 140 (150)
.+....+ ...|.|.++..+|.|.|.|.+.|..| .....+.|.|.
T Consensus 334 ~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G-~~~~~~~l~V~ 381 (382)
T 1cs6_A 334 PLASQNRIEVSGGELRFSKLVLEDSGMYQCVAENKHG-TVYASAELTVQ 381 (382)
T ss_dssp ECCCCSSEEEETTEEEESSCCGGGCEEEEEEEEETTE-EEEEEEEEEEE
T ss_pred ECCCCceEEEECCEEEECcCCcccCEEEEEEEEeCCC-eEEEEEEEEEe
Confidence 8765543 45799999999999999999999999 57778888775
No 33
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.85 E-value=3.3e-20 Score=112.98 Aligned_cols=123 Identities=20% Similarity=0.262 Sum_probs=97.4
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCceEEeCCCcEEEecCCcEEEEEEec--CCCCCCcEEEEeecC
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCEIT--PYDSGPYLIAWFKDG 94 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~--~p~~~~~~~~w~~~~ 94 (150)
++|.|.+++.+|+|.|+|.+.+..+ +..+.|.|..++..... ....+.+|+.+.|.|.+. .| .+.+.|++++
T Consensus 51 ~~L~i~~v~~~d~G~Y~C~~~~~~~--s~~~~l~V~~~~~~~~~-~~~~~~~g~~~~l~C~~~~~~p---~~~~~W~~~g 124 (176)
T 1f2q_A 51 SSLNIVNAKFEDSGEYKCQHQQVNE--SEPVYLEVFSDWLLLQA-SAEVVMEGQPLFLRCHGWRNWD---VYKVIYYKDG 124 (176)
T ss_dssp SEEEECSCCGGGCEEEEEECTTSSC--CCCEEEEEECSSEEEEE-SCSEEETTSCEEEEEEEGGGCC---EEEEEEEETT
T ss_pred eEEEEeccceecCEEEEEEcCCccc--cccEEEEEeCcceeecC-CcceeeCCCCEEEEEEecCCCC---ceEEEEEECC
Confidence 7899999999999999999988554 34556777654443332 234677999999999995 66 7899999999
Q ss_pred cccCCCcceeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCcCcc
Q psy11131 95 RQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGTRNI 145 (150)
Q Consensus 95 ~~~~~~~~~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p~~ 145 (150)
..+........|.|.++..+|.|.|.|.+.|..+...+..+.|.|.++|..
T Consensus 125 ~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~p~~ 175 (176)
T 1f2q_A 125 EALKYWYENHNISITNATVEDSGTYYCTGKVWQLDYESEPLNITVIKAPRE 175 (176)
T ss_dssp EECCSCCCSSEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEECSCC-
T ss_pred EEEeeecCCCeEEECCCCcccCEEEEEEEEeCCcceEecCEEEEEecCCCC
Confidence 887544446789999999999999999999976545677789999888753
No 34
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.85 E-value=2.2e-19 Score=110.35 Aligned_cols=130 Identities=24% Similarity=0.313 Sum_probs=102.5
Q ss_pred cCCCCceEEeC--CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCceEEeCCCcEEEecCCcEEEEEEec-CCC
Q psy11131 6 VLPGPRTRVLG--PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCEIT-PYD 82 (150)
Q Consensus 6 ~~~~~~~~~~~--~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~ 82 (150)
+..+.++.+.. ..|.|.+++..|+|.|+|.+.+..+.......|.|..+|.+...+ ...+.+|+.+.|.|.+. .|
T Consensus 45 ~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~-~~~~~~g~~v~l~C~~~~~p- 122 (192)
T 2va4_A 45 IEENEKYILKGSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFVQPHIIQLK-NETTYENGQVTLVCDAEGEP- 122 (192)
T ss_dssp CCCSSSEEEETTTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEEEC-CEEECTTSEEEEEEEEEEES-
T ss_pred cCCCccEEEeCCeeEEEEecCChhcCcEEEEEEEccccccceEEEEEEEccCcccccC-cceEEeCCeEEEEEEecCCC-
Confidence 34445666554 679999999999999999999988887788888888777665433 34567899999999999 88
Q ss_pred CCCcEEEEeec--CcccCCCc-----c--------eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEc
Q psy11131 83 SGPYLIAWFKD--GRQIPGRT-----S--------STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLG 140 (150)
Q Consensus 83 ~~~~~~~w~~~--~~~~~~~~-----~--------~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~ 140 (150)
.+.+.|+++ +..+.... . ...|.|.++..+|.|.|.|.+.|..| ....++.|.|.
T Consensus 123 --~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g-~~~~~~~l~V~ 192 (192)
T 2va4_A 123 --IPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAASRIG-GHQKSMYLDIE 192 (192)
T ss_dssp --CCEEEEEETTTTEEECTTCBCTTSCEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSC-EEEEEEEEEEC
T ss_pred --CCcEEEEeCCCCceeeccccccCCcEEEeeccCceEEEEecCCcccCEEEEEEEEecCC-ceEEEEEEEeC
Confidence 899999997 43332211 1 35799999999999999999999999 57777777763
No 35
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.85 E-value=5.8e-20 Score=121.03 Aligned_cols=129 Identities=16% Similarity=0.164 Sum_probs=99.9
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcc--eeEEEEEEEecCceEEeC-CCcEEEecCCcEEEEEEec-CCCCCCc-EEEEe
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGE--ATAEVRLQVSTPYRVDVN-PPLLSVHLDGSANFQCEIT-PYDSGPY-LIAWF 91 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~--~~~~~~l~v~~~~~~~~~-~~~~~~~~g~~~~l~C~~~-~p~~~~~-~~~w~ 91 (150)
..|.|.+....|.|.|+|.+.|..+. ......|.|..+|.+... ........|+.+.|.|.+. .| .| .+.|+
T Consensus 177 s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~v~~~~~~~~~~~~g~~v~l~C~~~g~P---~p~~v~W~ 253 (313)
T 4fqp_A 177 SLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVYYPPEVSISGYDNNWYLGQNEATLTCDARSNP---EPTGYNWS 253 (313)
T ss_dssp EEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCBCEEEEEEEECCCSCEETTCCCEEEEEEEEEES---CCCEEEEE
T ss_pred eeeeecccccccCeeEEEEEEccCcCccceeeeecccccCCccccccccceeecCCCeEEEEEEecCCC---CCcEEEEE
Confidence 35889999999999999999986554 345566777777766433 3344566788999999999 88 77 79999
Q ss_pred ecCcccCCCcc--eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCcCcccccC
Q psy11131 92 KDGRQIPGRTS--STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGTRNIKHYN 149 (150)
Q Consensus 92 ~~~~~~~~~~~--~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p~~~~~~ 149 (150)
+++..+..... ...|.|.++..+|.|.|.|.|.|..| ..+..+.|.|.++||...|.
T Consensus 254 ~~~~~l~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G-~~~~~~~l~V~~~PP~~~~~ 312 (313)
T 4fqp_A 254 TTMGPLPPFAVAQGAQLLIRPVDKPINTTLICNVTNALG-ARQAELTVQVKEGPPHHHHH 312 (313)
T ss_dssp ETTBSCCTTEEEETTEEEECCCSSCCEEEEEEEEECSSC-EEEEEEEEEEECCC------
T ss_pred ECCEECCCceEEeCCEEEECcCChhhCEEEEEEEEeCCC-cEEEEEEEEEEeCCCCCccC
Confidence 99987754432 56899999999999999999999999 68888999999988876653
No 36
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.85 E-value=1.2e-19 Score=115.25 Aligned_cols=125 Identities=26% Similarity=0.370 Sum_probs=97.9
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecC----ceE-EeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEE
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTP----YRV-DVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAW 90 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~----~~~-~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w 90 (150)
.+|.|.+++.+|+|.|+|.+.+..+.......|.|... +.+ ...+....+.+|+.+.|.|.+. .| .+.+.|
T Consensus 72 ~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p---~p~v~W 148 (241)
T 3grw_A 72 WSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDA---QPHIQW 148 (241)
T ss_dssp TEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCCCCCEEEECTTCSEECCTTCCEEEEEEEECSS---CCEEEE
T ss_pred eEEEEEeCCcccCEEEEEEEeecCCceEEEEEEEEeccCCCCceeecCCCccceecCCCEEEEEEEEecCC---CCEEEE
Confidence 68999999999999999999998888888888888752 222 2334566788999999999999 88 889999
Q ss_pred ee----cCcccCCCcc----------------eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCcCcc
Q psy11131 91 FK----DGRQIPGRTS----------------STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGTRNI 145 (150)
Q Consensus 91 ~~----~~~~~~~~~~----------------~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p~~ 145 (150)
++ ++..+..... ...|.|.++..+|.|.|.|.+.|..| .....+.|.|.++|..
T Consensus 149 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g-~~~~~~~l~V~~~p~~ 222 (241)
T 3grw_A 149 LKHVEVNGSKVGPDGTPYVTVLKSWISESVEADVRLRLANVSERDGGEYLCRATNFIG-VAEKAFWLSVHGPRAA 222 (241)
T ss_dssp EEECCSSSCSSCTTTCCCEEEEEEEECSBSEEEEEEEECSCCGGGCEEEEEEEECSSC-EEEEEEEEEC------
T ss_pred EEcccCCCcccCCCCceeeeeeeEeeeeecCCceEEEECcCCcccCcEEEEEEecCcc-eEEEEEEEEecCCCCC
Confidence 99 6665543321 34699999999999999999999999 6788899999887654
No 37
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.85 E-value=4.1e-20 Score=112.49 Aligned_cols=121 Identities=17% Similarity=0.281 Sum_probs=95.0
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCc
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGR 95 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~ 95 (150)
+.|.|.+++.+|+|.|+|.+.+..+ +..+.|.|..++..... ....+.+|+.+.|.|.+. .+. .+.+.|++++.
T Consensus 54 ~~L~i~~~~~~d~G~Y~C~~~n~~~--s~~~~l~V~~~~~~~~~-~~~~~~~g~~~~l~C~~~~~~~--~~~~~W~k~g~ 128 (175)
T 1fnl_A 54 SSYFIDAATVNDSGEYRCQTNLSTL--SDPVQLEVHIGWLLLQA-PRWVFKEEDPIHLRCHSWKNTA--LHKVTYLQNGK 128 (175)
T ss_dssp SEEEESSCCGGGCEEEEEECSSSCC--CCCEEEEEECSSEEEEC-SCSEEETTCCEEEEEEECTTCC--CEEEEEEETTE
T ss_pred eEEEEeCCCcccCEEEEEEeeCCcc--cccEEEEEeCCCceeeC-CCceecCCCCEEEEEEcCCCCC--ceEEEEEECCe
Confidence 7899999999999999999998543 45567777755444433 335678999999999998 551 46999999988
Q ss_pred ccCCCcceeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCc
Q psy11131 96 QIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGT 142 (150)
Q Consensus 96 ~~~~~~~~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~ 142 (150)
.+........|.|.++..+|.|.|.|.+.|..+...+..+.|.|.++
T Consensus 129 ~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~ 175 (175)
T 1fnl_A 129 DRKYFHHNSDFHIPKATLKDSGSYFCRGLVGSKNVSSETVNITITQA 175 (175)
T ss_dssp EEEEEEECCCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEECC
T ss_pred EccCCCCCCEEEEcccChhhCeEEEEEEEcCCCCccCccEEEEEeCC
Confidence 76433336789999999999999999999987655677788887653
No 38
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.84 E-value=2.3e-20 Score=116.05 Aligned_cols=130 Identities=28% Similarity=0.453 Sum_probs=102.1
Q ss_pred CCCceEEeCCeEEEcCCCCCCCeEEEEEeccCCc--ceeEEEEEEEecCceEEeCCCcEEEecCCcEEEEEEe-c-CCCC
Q psy11131 8 PGPRTRVLGPILAIEGVTAEDSGTYRCSSSNIGG--EATAEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCEI-T-PYDS 83 (150)
Q Consensus 8 ~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~--~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~-~-~p~~ 83 (150)
...|+.....+|.|.+++.+|+|.|+|.+.+..+ ..+..+.|.|..+|.....+....+.+|+.+.|.|.+ . .|
T Consensus 59 ~~~r~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p-- 136 (209)
T 1nbq_A 59 YEDRVTFLPTGITFKSVTREDTGTYTCMVSEEGGNSYGEVKVKLIVLVPPSKPTVNIPSSATIGNRAVLTCSEQDGSP-- 136 (209)
T ss_dssp TTTTCEEETTEEECSCCCTTSCSEEEEEEEETTSSCEECCEEECCEEBCCCCCCCCCBSEEETTSCEEECCCCCSCBS--
T ss_pred ccCceEeeccEEEEeeCCHHHCcEEEEEEecCCCCccceEEEEEEEecCCcCCCcccccceecCCEEEEEEeCCCCCC--
Confidence 4567777779999999999999999999998754 3455677888877665554555568899999999997 6 88
Q ss_pred CCcEEEEeecCcccCCCc---------------ceeeEEEccCCCCCCceEEEEEEeCCCCc-eeeeEEEEEc
Q psy11131 84 GPYLIAWFKDGRQIPGRT---------------SSTSLVINPVGREDRGIYQCIARRSDGDV-AQGSAELQLG 140 (150)
Q Consensus 84 ~~~~~~w~~~~~~~~~~~---------------~~~~l~~~~~~~~~~g~y~C~~~~~~g~~-~~~~~~l~v~ 140 (150)
.+.+.|++++..+.... ....|.|.++..+|.|.|.|.+.|..|.. .+..+.|.|.
T Consensus 137 -~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~v~l~V~ 208 (209)
T 1nbq_A 137 -PSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTTGELVFDPLSASDTGEYSCEARNGYGTPMTSNAVRMEAV 208 (209)
T ss_dssp -CCEEEEEETTCCCCSCSSSSSSCTTCCCCCCTTTCCEEESSCCGGGCCCEEEEEECSSSCCEECCCBCCEEE
T ss_pred -CceeEEEECCeeCCCccccceeeeccceEEcCCcceEEEEeccccCCeEEEEEEeCCcCcccccccEEEEEe
Confidence 88999999887665321 14689999999999999999999999843 3555555553
No 39
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.84 E-value=2e-19 Score=112.69 Aligned_cols=135 Identities=16% Similarity=0.186 Sum_probs=94.5
Q ss_pred CCCceEEeC-CeEEEcCCCCCCCeEEEEEeccCCcce-eEEEEEEEec--CceEEeCC-CcEEEecCCcEEEEEEec-CC
Q psy11131 8 PGPRTRVLG-PILAIEGVTAEDSGTYRCSSSNIGGEA-TAEVRLQVST--PYRVDVNP-PLLSVHLDGSANFQCEIT-PY 81 (150)
Q Consensus 8 ~~~~~~~~~-~~l~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~v~~--~~~~~~~~-~~~~~~~g~~~~l~C~~~-~p 81 (150)
.+.++.... ..|.|.+++.+|+|.|+|.+.+..+.. +..+.|.|.. ++.+...+ ....+.+|+.+.|.|.+. .|
T Consensus 54 ~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~n~~~~~~s~~~~l~v~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p 133 (213)
T 2x1w_L 54 DGNRISWDSKKGFTIPSYMISYAGMVFCEAKINDESYQSIMYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTEL 133 (213)
T ss_dssp CSSSCEEETTTEEEEEGGGTTTCSEEEEEEC----CEECCCEEEEECBCCEEEEEEESCSCEEEETTCCEEEEEEEEECT
T ss_pred CCCcccccCCccEEEccCChhcCceEEEEEEECCeeEEEEEEEEEEeCCcccceEEcCCCCeEEcCCCCEEEEEEEECCC
Confidence 334455444 789999999999999999998853332 2336677754 33343333 344789999999999998 65
Q ss_pred CCCCcEEEEeecCcccCCC----------------cceeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCcCc
Q psy11131 82 DSGPYLIAWFKDGRQIPGR----------------TSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGTRN 144 (150)
Q Consensus 82 ~~~~~~~~w~~~~~~~~~~----------------~~~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p~ 144 (150)
.. .+.+.|++++..+... .....|.|.++..+|+|.|.|.+.|..| ..+..+.|.|.+.|-
T Consensus 134 ~~-~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g-~~~~~~~l~V~~~p~ 210 (213)
T 2x1w_L 134 NV-GIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLM-TKKNSTFVRVHEDPI 210 (213)
T ss_dssp TB-CCEEEEECSCSSCCSEEEEEEEECCCSSCSCEEEEEEEEESSCCGGGCEEEEEEEECSSC-EEEEEEEEEEEC---
T ss_pred CC-ceEEEEEecCCccceEEEeccccccccCccceeeeEEEEECCCCcccCEEEEEEEecCCC-cEEEEEEEEEecccc
Confidence 10 3579999887653211 0134699999999999999999999999 678889999988764
No 40
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.84 E-value=5e-20 Score=126.17 Aligned_cols=124 Identities=15% Similarity=0.157 Sum_probs=94.3
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCceEEeCC--CcEEEecCCcEEEEEEec-CCCCCCcEEEEeec
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVDVNP--PLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKD 93 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~--~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~ 93 (150)
+.|.|.+++.+|+|.|+|.+.|. ....+.|.|..++.+...+ ....+.+|+.+.|.|.+. .| .|.+.|+++
T Consensus 290 ~~L~I~~v~~~D~G~Y~C~A~N~---~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~g~P---~p~i~W~k~ 363 (423)
T 3qs7_E 290 LFAFVSSVARNDTGYYTCSSSKH---PSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYP---QIRCTWTFS 363 (423)
T ss_dssp EEEEESSCCTTTCEEEEEEETTE---EEEEEEEEEESSCEEEEC---CEECCCTTCCCCEEEEEEEES---CCEEEEEET
T ss_pred EEEEEeecCHHHCEEEEEEEecC---CCceEEEEEEeCCcceEcCCCccEEecCCCeEEEEEEEEEcC---CCeEEEEEC
Confidence 57999999999999999999997 6778889999887776554 345567899999999999 99 899999999
Q ss_pred CcccCCCcc----eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCcCcccc
Q psy11131 94 GRQIPGRTS----STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGTRNIKH 147 (150)
Q Consensus 94 ~~~~~~~~~----~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p~~~~ 147 (150)
+..+..... ...+........|.|.|+|.|.|..| ..+.++.|.|.+.|....
T Consensus 364 g~~l~~~~~~~~~~~~~~~~~~~~~D~G~YtC~A~N~~G-~~~~s~~L~v~~~p~~~~ 420 (423)
T 3qs7_E 364 RKSFPCEQKGLDNGYSISKFCNHKHQPGEYIFHAENDDA-QFTKMFTLNIRSGTKHHH 420 (423)
T ss_dssp TEEEECBCCBCSSSSEEEEECCCTTCCSCEEEEEEETTE-EEEEEEEEC---------
T ss_pred CEECCCccccccCCcEEEEEecccccCEEEEEEEEcCCc-eEEEEEEEEEecCCcccc
Confidence 988754431 22232355677899999999999999 688999999998876543
No 41
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.84 E-value=1.3e-19 Score=122.51 Aligned_cols=118 Identities=23% Similarity=0.416 Sum_probs=102.2
Q ss_pred eEEEcCCCCCCCeEEEEEeccCCcceeE-EEEEEEecCceEEeCCCc-EEEecCCcEEEEEEec-CCCCCCcEEEEeecC
Q psy11131 18 ILAIEGVTAEDSGTYRCSSSNIGGEATA-EVRLQVSTPYRVDVNPPL-LSVHLDGSANFQCEIT-PYDSGPYLIAWFKDG 94 (150)
Q Consensus 18 ~l~i~~~~~~d~G~Y~C~~~~~~~~~~~-~~~l~v~~~~~~~~~~~~-~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~ 94 (150)
.|.|.++..+|+|.|+|.+.|..|.... .+.|.|..+|.+...+.. ..+.+|+.+.|.|.+. .| .+.+.|++++
T Consensus 271 ~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p---~p~v~W~~~g 347 (395)
T 1bih_A 271 RLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVVSAPKYEQKPEKVIVVKQGQDVTIPCKVTGLP---APNVVWSHNA 347 (395)
T ss_dssp EEEESSCCGGGCEEEEEEECCSSSSCEEEEEEEEEEEEEEEEECCCSEEEECTTSCEEEECEEEEES---CCCCEEEETT
T ss_pred eEEEccCChhhCEEEEEEEEeCCCCceEEEEEEEEEcCCccccCCCcceEecCCCeEEEEEEECccc---CCeeEEEECC
Confidence 7999999999999999999998887554 889999988888777766 7789999999999999 88 8899999999
Q ss_pred cccCCCcc---eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEE
Q psy11131 95 RQIPGRTS---STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQL 139 (150)
Q Consensus 95 ~~~~~~~~---~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v 139 (150)
..+..... ...|.|.++..+|.|.|.|.+.|..| .....+.|.|
T Consensus 348 ~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G-~~~~~~~l~V 394 (395)
T 1bih_A 348 KPLSGGRATVTDSGLVIKGVKNGDKGYYGCRATNEHG-DKYFETLVQV 394 (395)
T ss_dssp EECCSSSEEEETTEEEESSCCSTTCEEEEEEEEETTE-EEEEEEEEEE
T ss_pred EECCCCceEEECCEEEEeeCCcccCEEEEEEEEccCC-CceEEEEEEE
Confidence 87754421 45899999999999999999999999 5777777766
No 42
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.84 E-value=2.2e-19 Score=113.16 Aligned_cols=126 Identities=25% Similarity=0.323 Sum_probs=100.1
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCc----eEEe-CCCcEEEecCCcEEEEEEec-CCCCCCcEEEE
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPY----RVDV-NPPLLSVHLDGSANFQCEIT-PYDSGPYLIAW 90 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~----~~~~-~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w 90 (150)
.+|.|.+++..|+|.|+|.+.+..+.......|.|...+ .+.. .+....+.+|+.+.|.|.+. .| .+.+.|
T Consensus 76 ~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p---~p~v~W 152 (231)
T 3ojm_B 76 WSLIMESVVPSDKGNYTCVVENEYGSINHTYHLDVVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDA---QPHIQW 152 (231)
T ss_dssp TEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECCCCCCCEECTTCSCCEEEETTCCEEEECCEECSS---CCEEEE
T ss_pred ceEEEecCCcccCEEEEEEEecccCcccccEEEEEEcCCCCCCceeeccCCceEEEeCCcEEEEEEEecCC---CCEEEE
Confidence 579999999999999999999988888888888887532 2222 24567788999999999998 88 889999
Q ss_pred ee----cCcccCCCcc---------------eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCcCccc
Q psy11131 91 FK----DGRQIPGRTS---------------STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGTRNIK 146 (150)
Q Consensus 91 ~~----~~~~~~~~~~---------------~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p~~~ 146 (150)
++ ++..+..... ...|.|.++...|.|.|.|.+.|..| .....+.|.|..+|...
T Consensus 153 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g-~~~~~~~l~V~~~p~~p 226 (231)
T 3ojm_B 153 IKHVEKNGSKYGPDGLPYLKVLKHSGINSSNAEVLALFNVTEADAGEYICKVSNYIG-QANQSAWLTVLPKQQAP 226 (231)
T ss_dssp EEECCBTTBSBCTTSCBCEEEEEECSTTCSCTTEEEECSCCGGGCEEEEEEEEETTE-EEEEEEEEEEECCC---
T ss_pred EECCCCCCccccCCCcceEeEecccccccCCccEEEEecCCHHHCeEEEEEEEeccc-eEeeEEEEEEecCCCCC
Confidence 98 6655432221 24699999999999999999999999 57888999998876543
No 43
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.83 E-value=5.3e-19 Score=109.26 Aligned_cols=120 Identities=23% Similarity=0.274 Sum_probs=94.1
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeE---EEEEEEe-------cCceEEeCCCcEEEecCCcEEEEEEec-CCCCCC
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATA---EVRLQVS-------TPYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGP 85 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~---~~~l~v~-------~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~ 85 (150)
++|.|.+++.+|+|.|+|.+.+..+.... ...+.+. .+|.+...+....+.+|+.+.|.|.+. .| .
T Consensus 66 ~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p---~ 142 (201)
T 3s97_C 66 GNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNP---V 142 (201)
T ss_dssp CCEEESSCCGGGCEEEEEEEEEGGGTEEEECCCEEEEEECCSSCCCEEEEEEEECCCEEEETTCCEEEEEEEEEES---C
T ss_pred CeEEECcCCcccCeEEEEEEEecCCCcchhhcccceeeccccccCCCCCceEecCCceEEecCCcEEEEEEccCCC---C
Confidence 78999999999999999999986544332 3344443 233444444467788999999999999 88 8
Q ss_pred cEEEEeecCcccCCCcc----eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEc
Q psy11131 86 YLIAWFKDGRQIPGRTS----STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLG 140 (150)
Q Consensus 86 ~~~~w~~~~~~~~~~~~----~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~ 140 (150)
+.+.|++++..+..... ...|.|.++..+|.|.|.|.+.|..| .....+.|.|.
T Consensus 143 p~v~W~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g-~~~~~~~l~V~ 200 (201)
T 3s97_C 143 PDIRWRKVLEPMPSTAEISTSGAVLKIFNIQLEDEGIYECEAENIRG-KDKHQARIYVQ 200 (201)
T ss_dssp CEEEEEETTBCCCTTCEEETTTTEEEECSCCGGGCEEEEEEEEETTE-EEEEEEEEEEE
T ss_pred CceEEEeCCCcCCCceeecCCCCEEEEccCChhhCEEEEEEEEecCC-ceeeeEEEEEe
Confidence 99999999886654322 56899999999999999999999998 56777787775
No 44
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.83 E-value=1.6e-19 Score=126.30 Aligned_cols=126 Identities=18% Similarity=0.233 Sum_probs=107.9
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCceEEeCC---CcEEEecCCcEEEEEEec-CCCCCCcE-EEEe
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVDVNP---PLLSVHLDGSANFQCEIT-PYDSGPYL-IAWF 91 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~---~~~~~~~g~~~~l~C~~~-~p~~~~~~-~~w~ 91 (150)
+.|.|.+++.+|+|.|+|.+.|..|.....+.|.|..+|.+...+ ....+.+|+.+.|.|.+. .| .+. +.|+
T Consensus 273 ~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~g~P---~p~~v~W~ 349 (524)
T 2ec8_A 273 ATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVDKGFINIFPMINTTVFVNDGENVDLIVEYEAFP---KPEHQQWI 349 (524)
T ss_dssp EEEEESSCCTTTCEEEEEEEECSSCEEEEEEEEEEESSCEEEEEESSCSEEEECTTCCEEEEEEEEEES---CCCEEEEE
T ss_pred EEEEECCCCHHHCEEEEEEEEecCCceEEEEEEEEeccCceEeecCCCceEEEcCCCcEEEEEEEeecC---CCcEEEEE
Confidence 789999999999999999999998888889999999887776543 357789999999999999 88 787 9999
Q ss_pred ecCcccCCCcc-------------eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCcCccc
Q psy11131 92 KDGRQIPGRTS-------------STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGTRNIK 146 (150)
Q Consensus 92 ~~~~~~~~~~~-------------~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p~~~ 146 (150)
+++..+..... ...|.|.++..+|.|.|.|.+.|..| .....+.|.|..+|.+.
T Consensus 350 k~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g-~~~~~~~l~V~~~P~i~ 416 (524)
T 2ec8_A 350 YMNRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDV-NAAIAFNVYVNTKPEIL 416 (524)
T ss_dssp SSSCBCSSSBCCEESCCSSSCCEEEEEEEECSCCGGGCEEEEEEEECSSC-EEEEEEEEEECEEEEEE
T ss_pred ECCeeccCCccceeEEccCCCceeEEEEEEeecCcccCeEEEEEEEecCc-eEEEEEEEEEecCCeEe
Confidence 99887654431 35899999999999999999999999 57888999998776543
No 45
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.83 E-value=7.9e-20 Score=111.46 Aligned_cols=119 Identities=16% Similarity=0.219 Sum_probs=89.0
Q ss_pred CCCCceEEeC-CeEEEcCCCCCCCeEEEEEeccCCcce--eEEEEEEEecCceEEeCCCcEEEecCCcEEEEEEec-CCC
Q psy11131 7 LPGPRTRVLG-PILAIEGVTAEDSGTYRCSSSNIGGEA--TAEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCEIT-PYD 82 (150)
Q Consensus 7 ~~~~~~~~~~-~~l~i~~~~~~d~G~Y~C~~~~~~~~~--~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~ 82 (150)
..+.|+.+.. ++|.|.+++.+|+|.|.|.+.+..|.. ...+.|.|..++. .. .....+..+.|.|.+. .|
T Consensus 50 ~~~~r~~~~~~gsL~I~~v~~~D~G~Y~C~~~n~~g~~~~~~~~~l~V~~~~~----~p-~i~~~~~~v~L~C~~~g~p- 123 (176)
T 1hng_A 50 LKSGAFEILANGDLKIKNLTRDDSGTYNVTVYSTNGTRILNKALDLRILEMVS----KP-MIYWECSNATLTCEVLEGT- 123 (176)
T ss_dssp ESSTTEEECTTSCEEESSCCGGGCEEEEEEEEETTCCEEEEEEEEEEEECCCC----CC-EEEEETTTTEEEEECSSCS-
T ss_pred CCCCeEEECCCCcEEEcccccccCEEEEEEEEeCCCCEEEEEEEEEEEeCCCC----CC-EEEecCCcEEEEEEecCCC-
Confidence 3467777754 789999999999999999999987775 6667788876421 11 1122345689999999 88
Q ss_pred CCCcEEEEeecCcccCCCcceeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEE
Q psy11131 83 SGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAEL 137 (150)
Q Consensus 83 ~~~~~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l 137 (150)
.|.+.|++++..+.... .+.+..+..+|.|.|.|.|.|..| ..+....|
T Consensus 124 --~p~i~W~~~g~~l~~~~---~~~i~~~~~~d~G~Y~C~a~N~~g-~~~~~~~l 172 (176)
T 1hng_A 124 --DVELKLYQGKEHLRSLR---QKTMSYQWTNLRAPFKCKAVNRVS-QESEMEVV 172 (176)
T ss_dssp --SCEEEEEETTEEEEEES---SSEEEEECSCCSSCEEEEEEETTE-EEEEEECC
T ss_pred --CcEEEEEECCEECCCCC---cEEEEEEEccCCeEEEEEEEecCC-Cceecccc
Confidence 89999999988765332 245557778999999999999998 45544443
No 46
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.83 E-value=4.9e-20 Score=114.87 Aligned_cols=125 Identities=24% Similarity=0.382 Sum_probs=94.6
Q ss_pred EEEcCCCCCCCeEEEEEeccCCcce-eEEEEEEEec-CceEEeCCCcEEEecCCcEEEEEEe-c-CCCCCCcEEEEeecC
Q psy11131 19 LAIEGVTAEDSGTYRCSSSNIGGEA-TAEVRLQVST-PYRVDVNPPLLSVHLDGSANFQCEI-T-PYDSGPYLIAWFKDG 94 (150)
Q Consensus 19 l~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~v~~-~~~~~~~~~~~~~~~g~~~~l~C~~-~-~p~~~~~~~~w~~~~ 94 (150)
|.|.+++..|+|.|+|.+.+..+.. +....|.|.. ++.+...+....+.+|+.+.|.|.+ . .| .+.+.|++++
T Consensus 74 l~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p---~~~v~W~~~~ 150 (212)
T 2v9r_A 74 IVHGRKSRPDEGVYVCVARNYLGEAVSHDASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHP---EPTISWKKDG 150 (212)
T ss_dssp CCCCSSCCCSCEEEEEEEEETTEEEECCCEEEEECEECSSCSBCCCCEEEETTSCEEEECBCCCEES---CCEEEEEETT
T ss_pred EEecCCCcccCeEEEEEEECCCCceeecceEEEEEeccccceeCCCceEecCCCcEEEEEecCCCCC---CCEEEEEECC
Confidence 4455679999999999999877654 4456777764 3334445566788999999999998 6 88 8999999998
Q ss_pred cccCCCcc-----eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCcCccc
Q psy11131 95 RQIPGRTS-----STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGTRNIK 146 (150)
Q Consensus 95 ~~~~~~~~-----~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p~~~ 146 (150)
..+..... ...|.|.++..+|.|.|.|.+.|..|...+..+.|.|.++|..+
T Consensus 151 ~~l~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~s~~~~l~V~~~P~~~ 207 (212)
T 2v9r_A 151 SPLDDKDERITIRGGKLMITYTRKSDAGKYVCVGTNMVGERESEVAELTVLERPSFV 207 (212)
T ss_dssp EEECTTSTTEEEETTEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC-----
T ss_pred ccCCCCcceEEccCCeEEEeeCCHhhCeeEEEEEecccCceecceEEEEEEeCchHh
Confidence 87764332 45899999999999999999999998434456899998887654
No 47
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.83 E-value=2.1e-19 Score=117.08 Aligned_cols=134 Identities=17% Similarity=0.201 Sum_probs=102.3
Q ss_pred cCCCCceEEeC-CeEEEcCCCCCCCe-EEEEEeccCCcce-eEEEEEEEe----cCceEEeCCCcEEEecCCcEEEEEEe
Q psy11131 6 VLPGPRTRVLG-PILAIEGVTAEDSG-TYRCSSSNIGGEA-TAEVRLQVS----TPYRVDVNPPLLSVHLDGSANFQCEI 78 (150)
Q Consensus 6 ~~~~~~~~~~~-~~l~i~~~~~~d~G-~Y~C~~~~~~~~~-~~~~~l~v~----~~~~~~~~~~~~~~~~g~~~~l~C~~ 78 (150)
+..+.++.... +.|.|.++..+|+| .|+|.+.|..+.. +..+.|.|. .+|.+...+....+.+|+.+.|.|.+
T Consensus 133 l~~~~~~~~~~~~~L~i~~v~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~P~i~~~~~~~~v~~G~~v~l~C~~ 212 (290)
T 2o26_X 133 LPTDLTFVPNPKAGITIKNVKRAYHRLCVRCAAQRDGTWLHSDKFTLKVREAIKAIPVVSVPETSHLLKKGDTFTVVCTI 212 (290)
T ss_dssp CCTTCEEEEETTTEEEEESCCGGGTTCEEEEEEEETTEEEECCCEEEEEECCCCSCCEEECSCSBCCCCTTCCEEEEEEE
T ss_pred CCCCCceeeCCCCCEEEecccHHHCCCEEEEEEEECCceEEeEEEEEEEEeCCCCCCccccCCCcceEecCCcEEEEEEE
Confidence 33445555554 78999999999999 9999999975442 345777776 56677666666678899999999999
Q ss_pred c-CCCCCCcE-EEEeecCccc----CCC-----------cceeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcC
Q psy11131 79 T-PYDSGPYL-IAWFKDGRQI----PGR-----------TSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGG 141 (150)
Q Consensus 79 ~-~p~~~~~~-~~w~~~~~~~----~~~-----------~~~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~ 141 (150)
. .| .+. +.|++++..+ ... .....|.|.++..+|.|.|.|.+.|..| ..+..+.|.|.+
T Consensus 213 ~g~p---~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g-~~~~~~~l~V~~ 288 (290)
T 2o26_X 213 KDVS---TSVNSMWLKMNPQPQHIAQVKHNSWHRGDFNYERQETLTISSARVDDSGVFMCYANNTFG-SANVTTTLKVVE 288 (290)
T ss_dssp EESS---TTCEEEEEEESSSEEECCCEECCEEEEETTEEEEEEEEEESSCCSSSCEEEEEEEECSSC-EEEEEEEECC--
T ss_pred ecCC---cceeEEEecCCCCCccceeecccccccCceeeEEEEEEEEcCCCcccCeEEEEEEeCCCC-cEEEEEEEEEEe
Confidence 9 88 775 9999988762 111 0156899999999999999999999999 577888888876
Q ss_pred cC
Q psy11131 142 TR 143 (150)
Q Consensus 142 ~p 143 (150)
+|
T Consensus 289 ~P 290 (290)
T 2o26_X 289 KG 290 (290)
T ss_dssp --
T ss_pred CC
Confidence 65
No 48
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.83 E-value=5.3e-19 Score=115.87 Aligned_cols=123 Identities=24% Similarity=0.377 Sum_probs=102.3
Q ss_pred eEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCceEEe-----CCCcEEEecCCcEEEEEEec-CCCCCCcEEEEe
Q psy11131 18 ILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVDV-----NPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWF 91 (150)
Q Consensus 18 ~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~-----~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~ 91 (150)
.|.|.+++.+|+|.|+|.+.|..|.....+.|.|..++.+.. .+....+..|+.+.|.|.+. .| .+.+.|+
T Consensus 63 ~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p---~p~i~W~ 139 (305)
T 2nzi_A 63 QLIIASVTDDDATVYQVRATNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKP---DPVITWQ 139 (305)
T ss_dssp EEEESSCCGGGCSEEEEEEEETTEEEEEEEEEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEEEEES---CCEEEEE
T ss_pred EEEEccCChhhCeEEEEEEEcCCCCccceEEEEEecCCccCCCccccccccEEecCCCEEEEEEEECCCC---CCEEEEE
Confidence 899999999999999999999888888888999987655432 22456778999999999999 88 8999999
Q ss_pred ecCcccCCCcc--------eeeEEEcc-CCCCCCceEEEEEEeCCCCceeeeEEEEEcCcCc
Q psy11131 92 KDGRQIPGRTS--------STSLVINP-VGREDRGIYQCIARRSDGDVAQGSAELQLGGTRN 144 (150)
Q Consensus 92 ~~~~~~~~~~~--------~~~l~~~~-~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p~ 144 (150)
+++..+..... ...|.+.+ +...|.|.|.|.+.|..| .....+.+.|.++|.
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~~d~G~Y~C~a~N~~G-~~~~~~~l~v~~~P~ 200 (305)
T 2nzi_A 140 KGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAGFYVVCAKNRFG-IDQKTVELDVADVPD 200 (305)
T ss_dssp ESSSBCCSSSSCEEEECSSEEEEEETTCCCSTTCEEEEEEEEETTE-EEEEEEEEEEEBCCC
T ss_pred ECCEECCCCCcEEEEEcCCceEEEEecCCccCccEEEEEEEEeCCC-ceeeEEEEEEecCCC
Confidence 98877654332 35788888 999999999999999999 577788888876654
No 49
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.83 E-value=1.2e-19 Score=127.33 Aligned_cols=123 Identities=14% Similarity=0.149 Sum_probs=99.5
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCceEEeCCC--cEEEecCCcEEEEEEec-CCCCCCcEEEEeec
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVDVNPP--LLSVHLDGSANFQCEIT-PYDSGPYLIAWFKD 93 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~--~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~ 93 (150)
++|.|.+++.+|+|.|+|.+.|. ....+.|.|..+|.+...+. ...+.+|+.+.|.|.+. .| .|.+.|+++
T Consensus 290 ~~L~I~~v~~~DsG~Y~C~a~N~---~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~L~C~~~g~P---~p~i~W~k~ 363 (527)
T 3qs9_E 290 LFAFVSSVARNDTGYYTCSSSKH---PSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYP---QIRCTWTFS 363 (527)
T ss_dssp EEEEESSCCGGGCEEEEEEETTE---EEEEEEEEEC--CEEECCCSCCEECCCTTCCCCEEEEEEEES---CCEEEEEET
T ss_pred EEEEEccCCcccCeEEEEEEEeC---CCceEEEEEEccCccccccCcccEEEcCCCeEEEEEEEEecC---CCEEEEEEC
Confidence 56999999999999999999997 67778889988777665442 35567899999999999 99 899999999
Q ss_pred CcccCCCcc----eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCcCccc
Q psy11131 94 GRQIPGRTS----STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGTRNIK 146 (150)
Q Consensus 94 ~~~~~~~~~----~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p~~~ 146 (150)
+..+..... ...|.|.++..+|.|.|+|.+.|..| .....+.|.|..+|.+.
T Consensus 364 g~~l~~~~~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~g-~~~~~~~L~V~~~P~i~ 419 (527)
T 3qs9_E 364 RKSFPCEQKGLDNGYSISKFCNHKHQPGEYIFHAENDDA-QFTKMFTLNIRRKPQVL 419 (527)
T ss_dssp TEEEECBCCBCSSSSEEEEECCCTTCCSCEEEEEEETTE-EEEEEEEEC--CCCEEE
T ss_pred CEECcCCcccccCCcEEEEecCCcccCEEEEEEEEeCCC-cEEEEEEEEEecCCeEE
Confidence 987754332 45799999999999999999999999 57778899888877553
No 50
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.82 E-value=7e-19 Score=115.70 Aligned_cols=121 Identities=19% Similarity=0.286 Sum_probs=98.4
Q ss_pred eEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEec--------------------CceE-EeCCCcEEEecCCcEEEEE
Q psy11131 18 ILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVST--------------------PYRV-DVNPPLLSVHLDGSANFQC 76 (150)
Q Consensus 18 ~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~--------------------~~~~-~~~~~~~~~~~g~~~~l~C 76 (150)
.|.|.+++.+|+|.|+|.+.|..+.......|.|.. .+.+ ...+....+.+|+.+.|.|
T Consensus 165 ~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C 244 (317)
T 2y25_A 165 WLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTC 244 (317)
T ss_dssp EEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHHHHHHHHHHHHHHHTTTSCEEEEBCCSEEEEETTSBBCEEE
T ss_pred EEEECcCCcccCeeEEEEEEeCCceEEEEEEEeeeeccccchhhcccCCcccCcCCCCcccccCCccEEEEcCCEEEEEE
Confidence 499999999999999999999888777777776541 1222 2334556788999999999
Q ss_pred Eec-CCCCCCcEEEEeecCcccCCCcc---------eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCc
Q psy11131 77 EIT-PYDSGPYLIAWFKDGRQIPGRTS---------STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGT 142 (150)
Q Consensus 77 ~~~-~p~~~~~~~~w~~~~~~~~~~~~---------~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~ 142 (150)
.+. .| .+.+.|++++..+..... ...|.|.++..+|.|.|.|.+.|..| .....+.|.|..|
T Consensus 245 ~~~g~p---~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g-~~~~~~~l~V~~P 316 (317)
T 2y25_A 245 NVWGDP---PPEVSWLKNEKALASDDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYG-SETSDFTVSVFIP 316 (317)
T ss_dssp EEECSS---CCEEEEEESSSEECCCSSEEECCBTTTEEEEEEBSCCSTTCEEEEEEEEETTE-EEEEEEEEEEECC
T ss_pred EEecCC---CCEEEEEECCEeCCCCCcEEEEEcCCCEEEEEECCCCHHHCEEEEEEEEeCCC-eEEEEEEEEEEcC
Confidence 999 89 899999999887754432 23899999999999999999999999 6788888888754
No 51
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.82 E-value=8.9e-19 Score=114.03 Aligned_cols=126 Identities=19% Similarity=0.381 Sum_probs=101.8
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcc-eeEEEEEEEecCceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecC
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGE-ATAEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDG 94 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~ 94 (150)
..|.|.+++.+|+|.|+|.+.+..+. .+..+.|.|..++.+...+....+.+|+.+.|.|.+. .| .+.+.|++++
T Consensus 62 ~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p---~~~v~W~~~~ 138 (291)
T 1qz1_A 62 STLTIYNANIDDAGIYKCVVTAEDGTQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSL---PPTIIWKHKG 138 (291)
T ss_dssp EEEEECSCCGGGCEEEEEEEECTTSCEEEEEEEEEEECCSEEEECCSSEEEETTSCEEECCEEECSS---CCEEEEEETT
T ss_pred EEEEEecCCCCCCEEEEEEEEcCCCCeeEEEEEEEeeccccccCCCCcccccCCCeEEEEEEeccCC---CCEEEEEECC
Confidence 68999999999999999999998654 5677888888888887777778899999999999999 88 8899999998
Q ss_pred cccCCCcc-------eeeEEEccCCCCCCceEEEEEEeCCC-CceeeeEEEEEcCcCcc
Q psy11131 95 RQIPGRTS-------STSLVINPVGREDRGIYQCIARRSDG-DVAQGSAELQLGGTRNI 145 (150)
Q Consensus 95 ~~~~~~~~-------~~~l~~~~~~~~~~g~y~C~~~~~~g-~~~~~~~~l~v~~~p~~ 145 (150)
..+..... ...|.|.++...|.|.|.|.+.|..+ ......+.+.|..+|.+
T Consensus 139 ~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~~p~~ 197 (291)
T 1qz1_A 139 RDVILKKDVRFIVLSNNYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNVPPTV 197 (291)
T ss_dssp SCSSTTCCTTEEECTTSCEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEEEEEEE
T ss_pred EEcccCCCceEEEccCCcEEEccCccccCeEEEEEEEecCCCceeeEEEEEEEecCCcc
Confidence 76643211 45799999999999999999998764 22345566666655543
No 52
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.82 E-value=5.5e-19 Score=117.18 Aligned_cols=126 Identities=25% Similarity=0.351 Sum_probs=101.8
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecC----ceEEe-CCCcEEEecCCcEEEEEEec-CCCCCCcEEEE
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTP----YRVDV-NPPLLSVHLDGSANFQCEIT-PYDSGPYLIAW 90 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~----~~~~~-~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w 90 (150)
.+|.|.+++.+|+|.|+|.+.|..|.....+.|.|... |.+.. .+....+.+|+.+.|.|.+. .| .+.+.|
T Consensus 180 ~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~p---~p~v~W 256 (334)
T 1ry7_B 180 WSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDA---QPHIQW 256 (334)
T ss_dssp TEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEECCCCSSCBCCTTCSCCEEEESSCCEEECCCCBCSS---CEEEEE
T ss_pred EEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEecCCCCCCceEecCCCceEEeCCCCEEEEEEEecCC---CCeEEE
Confidence 58999999999999999999998888888888888753 22222 23557788999999999999 88 899999
Q ss_pred ee----cCcccCCCcc-----------------eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCcCccc
Q psy11131 91 FK----DGRQIPGRTS-----------------STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGTRNIK 146 (150)
Q Consensus 91 ~~----~~~~~~~~~~-----------------~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p~~~ 146 (150)
++ ++..+..... ...|.|.++..+|.|.|.|.+.|..| .....+.|.|...|+.+
T Consensus 257 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G-~~~~~~~l~V~~~~~~~ 332 (334)
T 1ry7_B 257 LKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCLAGNSIG-FSHHSAWLVVLPAEEEL 332 (334)
T ss_dssp EECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCCCEEECSCCTTSCSEEEEEEEESSC-CEEEEEEEEEECSCCC-
T ss_pred EECCcCCCccccCCCCeeEEEeecCccccccccccEEEEccCCHHHCEEEEEEEeCCCC-eEEEEEEEEEEECCCCc
Confidence 98 5554432211 13799999999999999999999999 57888999998877654
No 53
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.82 E-value=9.3e-19 Score=113.94 Aligned_cols=129 Identities=27% Similarity=0.452 Sum_probs=101.4
Q ss_pred CCceEEeC-CeEEEcCCCCCCCeEEEEEeccCCcc--eeEEEEEEEecCceEEeCCC--cEEEecCCcEEEEEEec-CCC
Q psy11131 9 GPRTRVLG-PILAIEGVTAEDSGTYRCSSSNIGGE--ATAEVRLQVSTPYRVDVNPP--LLSVHLDGSANFQCEIT-PYD 82 (150)
Q Consensus 9 ~~~~~~~~-~~l~i~~~~~~d~G~Y~C~~~~~~~~--~~~~~~l~v~~~~~~~~~~~--~~~~~~g~~~~l~C~~~-~p~ 82 (150)
+.++.... +.|.|.+++.+|+|.|+|.+.+..+. ......|.|..+|.+..... ...+.+|+.+.|.|.+. .|
T Consensus 146 ~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p- 224 (291)
T 1qz1_A 146 DVRFIVLSNNYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNVPPTVQARQSIVNATANLGQSVTLVCDADGFP- 224 (291)
T ss_dssp CTTEEECTTSCEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEEEEEEEEESCSEEEEETTSCCCEEEEEEEEEES-
T ss_pred CceEEEccCCcEEEccCccccCeEEEEEEEecCCCceeeEEEEEEEecCCcccccccccccccccCceEEEEEEEEEeC-
Confidence 34444444 78999999999999999999976433 34566777777776655443 34567899999999999 88
Q ss_pred CCCcEEEEeecCcccCCCc----c------eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcC
Q psy11131 83 SGPYLIAWFKDGRQIPGRT----S------STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGG 141 (150)
Q Consensus 83 ~~~~~~~w~~~~~~~~~~~----~------~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~ 141 (150)
.+.+.|++++..+.... . ...|.|.++..+|.|.|.|.+.|..| ..+..+.|.|.+
T Consensus 225 --~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G-~~~~~~~l~V~~ 290 (291)
T 1qz1_A 225 --EPTMSWTKDGEPIENEEEDDEKHIFSDDSSELTIRNVDKNDEAEYVCIAENKAG-EQDASIHLKVFA 290 (291)
T ss_dssp --CCEEEEEETTEECCCC--CCSSEEECTTSCEEEECSCCGGGCEEEEEEEEETTE-EEEEEEEEEEEC
T ss_pred --CCcEEEEECCEECcCCCCCCcceEEcCCCcEEEEEecChhcCEEEEEEEEeCCC-ceEEEEEEEEEc
Confidence 89999999988776543 1 35799999999999999999999999 577888888754
No 54
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.81 E-value=8.1e-19 Score=115.10 Aligned_cols=123 Identities=22% Similarity=0.385 Sum_probs=91.6
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEE-EEEEEe---cCceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEe
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAE-VRLQVS---TPYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWF 91 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~-~~l~v~---~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~ 91 (150)
+.|.|.+++.+|+|.|+|.+.|..|..... ..|.|. .+|.+...+....+.+|+.+.|.|.+. .| .+.+.|+
T Consensus 164 ~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p---~p~v~W~ 240 (304)
T 2yd9_A 164 GALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVQNVAPRFSILPMSHEIMPGGNVNITCVAVGSP---MPYVKWM 240 (304)
T ss_dssp SCEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEECCCEEEEEEECCCCBCCCTTCCEEEEEEEEEES---CCEEEEE
T ss_pred eEEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEeeccCCcEEecCCceEEcCCCeEEEEEEEeeeC---CCEEEEE
Confidence 789999999999999999999987765422 455553 455666666666788999999999999 88 8999999
Q ss_pred ecCcccCCCcc----eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCcCcc
Q psy11131 92 KDGRQIPGRTS----STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGTRNI 145 (150)
Q Consensus 92 ~~~~~~~~~~~----~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p~~ 145 (150)
+++..+..... ...|.+..+ +|.|.|.|.+.|..| .....+.|.|.+++..
T Consensus 241 ~~~~~l~~~~~~~~~~~~L~i~~~--~d~G~Y~C~a~N~~G-~~~~~~~l~V~~~~~~ 295 (304)
T 2yd9_A 241 QGAEDLTPEDDMPVGRNVLELTDV--KDSANYTCVAMSSLG-VIEAVAQITVKSLPKA 295 (304)
T ss_dssp ETTEECSCSSSCCBSEEEEEECSC--CSCEEEEEEEEETTE-EEEEEEEEC-------
T ss_pred ECCEECCCcccccCCcEEEEEccc--ccCEEEEEEEEeCCC-cEEEEEEEEEecCccc
Confidence 99887754432 234555544 689999999999999 6778888888876644
No 55
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.81 E-value=1e-18 Score=116.60 Aligned_cols=132 Identities=17% Similarity=0.211 Sum_probs=102.4
Q ss_pred CCCceEEeCCeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCceEEe----CCCcEEEecCCcEEEEEEe-----
Q psy11131 8 PGPRTRVLGPILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVDV----NPPLLSVHLDGSANFQCEI----- 78 (150)
Q Consensus 8 ~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~----~~~~~~~~~g~~~~l~C~~----- 78 (150)
.+.++...++.|.|.+++.+|+|.|+|.+.+..+.....+.|.|..++.... .+....+.+|+.+.|.|..
T Consensus 70 ~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~ 149 (349)
T 4dep_C 70 PENRISKEKDVLWFRPTLLNDTGNYTCMLRNTTYCSKVAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYF 149 (349)
T ss_dssp GGGCEEEETTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSS
T ss_pred cCceEeecCCEEEEccCChhhCEEEEEEEecCCceEEEEEEEEEecCCcccCcccccCcceeeecCccEEEEcCCCcccc
Confidence 3455666668999999999999999999999888888888899886543221 1234567789999999985
Q ss_pred c-CCCCCCcEEEEeecCcccCCCcc----eeeEEEccCCCCCCceEEEEEEeCC-CCc--eeeeEEEEEcCc
Q psy11131 79 T-PYDSGPYLIAWFKDGRQIPGRTS----STSLVINPVGREDRGIYQCIARRSD-GDV--AQGSAELQLGGT 142 (150)
Q Consensus 79 ~-~p~~~~~~~~w~~~~~~~~~~~~----~~~l~~~~~~~~~~g~y~C~~~~~~-g~~--~~~~~~l~v~~~ 142 (150)
. .| .+.+.|++++..+..... ...|.|.++..+|.|.|.|.+.|.. |.. .+..+.+.|..+
T Consensus 150 ~g~p---~~~v~W~k~~~~l~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~ 218 (349)
T 4dep_C 150 PSSV---KPTITWYMGCYKIQNFNNVIPEGMNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGS 218 (349)
T ss_dssp CTTS---CCEEEEEETTEECCSCSSEEEETTEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECC
T ss_pred cCCC---CceEEEeeCCEECCCccceeecCCEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEcc
Confidence 4 67 899999999987754322 4579999999999999999999987 422 267777777664
No 56
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.81 E-value=2e-18 Score=112.35 Aligned_cols=136 Identities=19% Similarity=0.342 Sum_probs=102.8
Q ss_pred CCCCceEEeC----CeEEEcCCCCCCCeEEEEEeccCCcce-eEEEEEEEecCceEEeCCCcEEEecCCcEEEEEEec-C
Q psy11131 7 LPGPRTRVLG----PILAIEGVTAEDSGTYRCSSSNIGGEA-TAEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCEIT-P 80 (150)
Q Consensus 7 ~~~~~~~~~~----~~l~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~ 80 (150)
..+.++.+.. ..|.|.+++.+|+|.|+|.+.+..|.. +..+.|.|..++.+...+....+.+|+.+.|.|.+. .
T Consensus 46 ~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~ 125 (291)
T 2wim_A 46 ISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSS 125 (291)
T ss_dssp CCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSSCEEEEEEEEEEECCCBCCSCCCSEEEETTSCEEECCCCBCS
T ss_pred cCCCcEEEecCCCEEEEEEccCCcccCEEEEEEEecccCceEEEEEEEEecCCcceEeCCCChhhcCCCCEEEEEEEccC
Confidence 3445555543 479999999999999999999987664 466788888777766666677889999999999999 8
Q ss_pred CCCCCcEEEEeecCcccCCCc--c-----eeeEEEccCCCCCCceEEEEEEeCCCC-ceeeeEEEEEcCcCcc
Q psy11131 81 YDSGPYLIAWFKDGRQIPGRT--S-----STSLVINPVGREDRGIYQCIARRSDGD-VAQGSAELQLGGTRNI 145 (150)
Q Consensus 81 p~~~~~~~~w~~~~~~~~~~~--~-----~~~l~~~~~~~~~~g~y~C~~~~~~g~-~~~~~~~l~v~~~p~~ 145 (150)
| .+.+.|++++..+.... . ...|.|.++...|.|.|.|.+.+..+. .....+.+.+..+|.+
T Consensus 126 p---~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~~~p~~ 195 (291)
T 2wim_A 126 P---APAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAI 195 (291)
T ss_dssp S---CCEEEEECC----CBCCCSSEEECTTSCEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEEBCCCC
T ss_pred C---CCEEEEEECCccccccCCceEEEccCCCEEEEecchhhCEEEEEEEEECCCCeeEEeeEEEEeccCCcc
Confidence 8 89999999887654311 1 457999999999999999999998752 2345667777766654
No 57
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.81 E-value=2.1e-19 Score=111.84 Aligned_cols=126 Identities=13% Similarity=0.221 Sum_probs=93.6
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCceE-EeCCCcEEEecCCcEEEEEEec-CCCCCC--cEEEEee
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRV-DVNPPLLSVHLDGSANFQCEIT-PYDSGP--YLIAWFK 92 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~-~~~~~~~~~~~g~~~~l~C~~~-~p~~~~--~~~~w~~ 92 (150)
..|.|.+++.+|+|.|.|.+.|..+..+..+.|.|..+|.. ...+. ..+.+|+.+.|.|.+. .+. . +.+.|++
T Consensus 54 ~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~l~V~~~p~~~~~~~~-~~~~~G~~~~L~C~~~~~~p--~~~~~i~W~k 130 (202)
T 1vca_A 54 STLTMNPVSFGNEHSYLCTATCESRKLEKGIQVEIYSFPKDPEIHLS-GPLEAGKPITVKCSVADVYP--FDRLEIDLLK 130 (202)
T ss_dssp EEEEESSCCGGGCSEEEEEEEETTEEEEEEEEEEEEBCCSCCEEEES-SCEETTSCEEEEEEEEEEBS--GGGEEEEEEE
T ss_pred cEEEECcCCHHHCEEEEEEEEECCceEeeEEEEEEEeCCCCCEeCCc-eEEcCCCCEEEEEEECCcCC--CCCeEEEEEe
Confidence 57999999999999999999998887788889999875532 22222 4578999999999998 430 3 4899999
Q ss_pred cCcccCCCc----------c--eeeEEEccCCCCCCceEEEEEEeCCCCc------eeeeEEEEEcCcCcc
Q psy11131 93 DGRQIPGRT----------S--STSLVINPVGREDRGIYQCIARRSDGDV------AQGSAELQLGGTRNI 145 (150)
Q Consensus 93 ~~~~~~~~~----------~--~~~l~~~~~~~~~~g~y~C~~~~~~g~~------~~~~~~l~v~~~p~~ 145 (150)
++..+.... . ...|.+.....+|.|.|+|.|.|..+.. ...++.|.|..+|..
T Consensus 131 ~~~~l~~~~~~~~~~~~~~~~~~~~l~i~~~~~d~~g~ytC~A~n~~~~~~~~~~~~~~~~~L~V~y~P~~ 201 (202)
T 1vca_A 131 GDHLMKSQEFLEDADRKSLETKSLEVTFTPVIEDIGKVLVCRAKLHIDEMDSVPTVRQAVKELQVYISPKN 201 (202)
T ss_dssp TTEEEEEEECCSCCSSCCCEEEEEEEEECCCGGGTTCEEEEEEEECSCCCTTSCSEEEEEEECCEECCC--
T ss_pred CCeECcccccccccCcCcceEEEEEEEEEeeeccCCCeEEEEEEccccCCCCcceeEeeEEEEEEecCCCC
Confidence 887543111 1 3345677777788899999999987631 456788888888853
No 58
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.81 E-value=1.5e-18 Score=107.40 Aligned_cols=120 Identities=23% Similarity=0.328 Sum_probs=88.0
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCC-c--ceeEEEEEEEec---CceEEeCCCcEEEecCCcEEEEEEecCCCCCCcEEEE
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIG-G--EATAEVRLQVST---PYRVDVNPPLLSVHLDGSANFQCEITPYDSGPYLIAW 90 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~-~--~~~~~~~l~v~~---~~~~~~~~~~~~~~~g~~~~l~C~~~~p~~~~~~~~w 90 (150)
+.|.|.+++.+|+|.|+|.+.|.. + ..+..+.|.|.. +|.+...+ ...+.+|+.+.|.|.+... .+.+.|
T Consensus 58 ~~L~i~~v~~~D~G~Y~C~a~n~~~g~~~~s~~~~l~V~~~~~~p~i~~~~-~~~v~~G~~v~L~C~~~~~---~~~v~W 133 (198)
T 1ugn_A 58 GQFPIPSITWEHTGRYRCYYGSDTAGRSESSDPLELVVTGAYIKPTLSAQP-SPVVNSGGNVTLQCDSQVA---FDGFIL 133 (198)
T ss_dssp TEEEESSCCGGGCEEEEEEEEETTTEECCCCCCEEEEEECSSCCCEEEEES-CSEEETTCCEEEEEECSSC---CSEEEE
T ss_pred cEEEECCCCHHHCeEEEEEEECCCCCcccCCccEEEEEcccccCCccccCC-ccccCCCCcEEEEEecCCC---CcEEEE
Confidence 789999999999999999999876 4 345667788876 34444333 2467899999999998733 579999
Q ss_pred eecCcccCCCc----------ceeeEEEccCCCCCCceEEEEEEeCCCC----ceeeeEEEEEc
Q psy11131 91 FKDGRQIPGRT----------SSTSLVINPVGREDRGIYQCIARRSDGD----VAQGSAELQLG 140 (150)
Q Consensus 91 ~~~~~~~~~~~----------~~~~l~~~~~~~~~~g~y~C~~~~~~g~----~~~~~~~l~v~ 140 (150)
++++..+.... ....|.|.++..+|.|.|.|.+.|..+. ..+..+.|.|.
T Consensus 134 ~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~ 197 (198)
T 1ugn_A 134 CKEGEDEHPQCLNSQPHARGSSRAIFSVGPVSPSRRWWYRCYAYDSNSPYEWSLPSDLLELLVL 197 (198)
T ss_dssp EEC------CEEEC------CCEEEEEECCCCTTSCEEEEEEEECTTSTTEECCCCCCEEEEEE
T ss_pred EECCCccCCccccccccCCCcceeEEEecccCcccCeEEEEEEEeCCCCccccCcCceEEEEec
Confidence 99987653211 0378999999999999999999997642 23667777764
No 59
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.81 E-value=6.2e-19 Score=110.93 Aligned_cols=123 Identities=15% Similarity=0.217 Sum_probs=92.3
Q ss_pred eEEEcCCCCCCCeEEEEEeccCCcc--eeEEEEEEEec---CceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEe
Q psy11131 18 ILAIEGVTAEDSGTYRCSSSNIGGE--ATAEVRLQVST---PYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWF 91 (150)
Q Consensus 18 ~l~i~~~~~~d~G~Y~C~~~~~~~~--~~~~~~l~v~~---~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~ 91 (150)
.|.|.+++.+|+|.|+|.+.+..+. .+..+.|.|.+ +|.+...+ ...+.+|+.+.|.|... .| .+.+.|+
T Consensus 65 ~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~~~l~V~~~~~~P~i~~~p-~~~v~~G~~v~L~C~~~~~~---~~~~~W~ 140 (218)
T 1uct_A 65 EFVIDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVTGLYGKPFLSADR-GLVLMPGENISLTCSSAHIP---FDRFSLA 140 (218)
T ss_dssp EEEECSCCGGGCEEEEEEEEETTTEEEECCCEEEEEECSSCCCEEEESS-CSEECTTCCCEEEEECSSSC---CSEEEEE
T ss_pred EEEEcccccccCEEEEEEEEcCCCceeecCCEEEEEcCcccCCEEEeCC-CCccCCCCCEEEEEeCCCCC---CCEEEEE
Confidence 8999999999999999999987543 34456777764 34454444 34678999999999666 77 7899999
Q ss_pred ecCcccCCCc----ceeeEEEccCCCCCCceEEEEEEeCCC----CceeeeEEEEEcCcCc
Q psy11131 92 KDGRQIPGRT----SSTSLVINPVGREDRGIYQCIARRSDG----DVAQGSAELQLGGTRN 144 (150)
Q Consensus 92 ~~~~~~~~~~----~~~~l~~~~~~~~~~g~y~C~~~~~~g----~~~~~~~~l~v~~~p~ 144 (150)
+++..+.... ....|.|.++..+|.|.|.|.+.+... ...+..+.|.|.+.++
T Consensus 141 k~g~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g~~~ 201 (218)
T 1uct_A 141 KEGELSLPQHQSGEHPANFSLGPVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTDSIH 201 (218)
T ss_dssp ETTCSSCCSEEECSSSEEEECCSCCGGGCEEEEEEEECTTSTTEECCCCCCEEEEEC----
T ss_pred ECCCcccccccCCCccCEEEEccCCcccCEEEEEEEEcCCCCCcCCCCCCcEEEEEecCCC
Confidence 9987664321 157899999999999999999997531 2456778898887553
No 60
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.81 E-value=3.8e-19 Score=109.97 Aligned_cols=120 Identities=18% Similarity=0.268 Sum_probs=91.4
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCc--ceeEEEEEEEec---CceEEeCCCcEEEecCCcEEEEEEecCCCCCCcEEEEe
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGG--EATAEVRLQVST---PYRVDVNPPLLSVHLDGSANFQCEITPYDSGPYLIAWF 91 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~--~~~~~~~l~v~~---~~~~~~~~~~~~~~~g~~~~l~C~~~~p~~~~~~~~w~ 91 (150)
+.|.|.+++.+|+|.|+|.+.|..+ ..+..+.|.|.. +|.+...+.. .+.+|+.+.|.|.+..+ .+.+.|+
T Consensus 58 ~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~V~~~~~~p~~~~~~~~-~v~~G~~v~L~C~~~~~---~~~~~w~ 133 (196)
T 3p2t_A 58 ARFSIPSMTEDYAGRYRCYYRSPVGWSQPSDPLELVMTGAYSKPTLSALPSP-LVTSGKSVTLLCQSRSP---MDTFLLC 133 (196)
T ss_dssp EEEEESSCCGGGCEEEEEEEEETTEEBCCCCCEEEEEECSSCCCEEEEESCS-EECTTCCEEEEEEEEEE---EEEEEEE
T ss_pred EEEEeccCCcccCceEEEEEeCCCcccCCCccEEEEecCCCCCCEEEeCCcc-eecCCCeEEEEEecCCC---CCEEEEE
Confidence 6799999999999999999999876 345567777764 3444443333 57899999999998844 5689999
Q ss_pred ecCcccCCCc---------ceeeEEEccCCCCCCceEEEEEEeCCC----CceeeeEEEEEc
Q psy11131 92 KDGRQIPGRT---------SSTSLVINPVGREDRGIYQCIARRSDG----DVAQGSAELQLG 140 (150)
Q Consensus 92 ~~~~~~~~~~---------~~~~l~~~~~~~~~~g~y~C~~~~~~g----~~~~~~~~l~v~ 140 (150)
+++..+.... ....|.|.++..+|.|.|.|.+.|..+ ...+..+.|.|.
T Consensus 134 k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~ 195 (196)
T 3p2t_A 134 KERAAHPLLCLRSEHGAQQHQAEFPMSPVTSVHGGTYRCFSSHGFSHYLLSHPSDPLELIVS 195 (196)
T ss_dssp ETTCCCGGGSEEEEEEEEEEEEEEEECSCCGGGCEEEEEEEECGGGTTEECCCCCCEEEEEC
T ss_pred eCCCcccceeecccccccCcceEEEeCCCcccCCCeEEEEEEcCCCCcccCCCCCCEEEEeC
Confidence 9887553221 146799999999999999999999865 345666777764
No 61
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.81 E-value=9.2e-19 Score=107.17 Aligned_cols=115 Identities=16% Similarity=0.142 Sum_probs=92.3
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCc
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGR 95 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~ 95 (150)
.+|.|.+++.+|+|.|+|.+.+..+ .+.|.|... .. +....+.+|+.+.|.|.+. .| .+.+.|++++.
T Consensus 68 ~~L~i~~v~~~D~G~Y~C~~~~~~~----~~~l~V~~~---~~-~~~~~v~~g~~~~l~C~~~~~p---~~~v~W~~~~~ 136 (184)
T 2ny1_B 68 FPLIIKNLKIEDSDTYICEVEDQKE----EVQLLVFGL---TA-NSDTHLLQGQSLTLTLESPPGS---SPSVQCRSPRG 136 (184)
T ss_dssp CCEEECSCCGGGCEEEEEEETTEEE----EEEEEEEEE---EE-SSCSEEETTCCEEEEEECCTTC---CCEEEEECTTS
T ss_pred EEEEEecCCHHHCEEEEEEEEcCCC----cEEEEEEEe---cC-CCCceeecCCCEEEEEEcCCCC---CCEEEEEeCCC
Confidence 4599999999999999999988643 455666632 22 3334678999999999998 88 99999998876
Q ss_pred ccCCCcceeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCcCcc
Q psy11131 96 QIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGTRNI 145 (150)
Q Consensus 96 ~~~~~~~~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p~~ 145 (150)
.+.. ....|.|.++..+|.|.|.|.+.|..+ ..+..+.|.|.+.|..
T Consensus 137 ~~~~--~~~~L~i~~v~~~d~G~Y~C~a~n~~~-~~~~~~~l~V~~~p~~ 183 (184)
T 2ny1_B 137 KNIQ--GGKTLSVSQLELQDSGTWTCTVLQNQK-KVEFKIDIVVLAFQKA 183 (184)
T ss_dssp CEEE--ESSEEEESSCCGGGCEEEEEEEEETTE-EEEEEEEEEEECCCC-
T ss_pred cccc--CceEEEEecCCcCCCeEEEEEEEECCc-eEEEEEEEEEEecCCC
Confidence 5422 257899999999999999999999877 6788889999887753
No 62
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.81 E-value=1.2e-18 Score=109.41 Aligned_cols=121 Identities=22% Similarity=0.374 Sum_probs=87.5
Q ss_pred eEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeec-Cc
Q psy11131 18 ILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKD-GR 95 (150)
Q Consensus 18 ~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~-~~ 95 (150)
+|.|.+++.+|+|.|+|.+.+ .+.....+.|.|..++............+|+.+.|.|.+. .| .|.+.|+++ +.
T Consensus 81 ~L~I~~v~~~D~G~Y~C~~~~-~~~~~~~~~l~V~~~~~~~~~~~~~~~~~g~~v~L~C~~~g~P---~p~i~W~~~~g~ 156 (222)
T 3sbw_C 81 ALQITDVKLQDAGVYRCMISY-GGADYKRITVKVNAPYNKINQRILVVDPVTSEHELTCQAEGYP---KAEVIWTSSDHQ 156 (222)
T ss_dssp EEEESSCCGGGCEEEEEEEES-SSEEEEEEEEEEEBCCCCCEEEEEEEETTTTEEEEEEEEEEBS---CCEEEEEETTCC
T ss_pred EEEEcCcccccCeEEEEEEEe-CCCceeEEEEEEECCCCCCCceeeeeecCCCcEEEEEEecCCC---CCeEEEEECCCc
Confidence 799999999999999999998 5666777888888654322111112456899999999999 99 899999998 44
Q ss_pred ccCCCcc-------ee---eEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCcC
Q psy11131 96 QIPGRTS-------ST---SLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGTR 143 (150)
Q Consensus 96 ~~~~~~~-------~~---~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p 143 (150)
.+..... .. ......+...|.|.|.|.+.|..| .....+.+.|.++|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n~~g-~~~~~~~l~v~~~p 213 (222)
T 3sbw_C 157 VLSGKTTTTNSKREEKLFNVTSTLRINTTTNEIFYCTFRRLDP-EENHTAELVIPELP 213 (222)
T ss_dssp EECCEEEEEECC----CEEEEEEEEEECCTTCEEEEEEEETTT-TEEEEEEEECCCC-
T ss_pred eecCccceEEEcCCCCCEEEEEEEEEeccCCcEEEEEEEeCcc-ceeeEEEEEecCCc
Confidence 4332110 11 112223456889999999999999 57788888887655
No 63
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.80 E-value=6.6e-18 Score=111.15 Aligned_cols=128 Identities=18% Similarity=0.268 Sum_probs=98.7
Q ss_pred CceEEeCCeEEEcCCCCCCCeEEEEEec-cCCcce---eEEEEEEEe-----cCceEEeCCCc-EEEecCCcEEEEEEec
Q psy11131 10 PRTRVLGPILAIEGVTAEDSGTYRCSSS-NIGGEA---TAEVRLQVS-----TPYRVDVNPPL-LSVHLDGSANFQCEIT 79 (150)
Q Consensus 10 ~~~~~~~~~l~i~~~~~~d~G~Y~C~~~-~~~~~~---~~~~~l~v~-----~~~~~~~~~~~-~~~~~g~~~~l~C~~~ 79 (150)
.++....+.|.|.+++.+|+|.|+|.+. +..|.. .....+.+. .+|.+...+.. ..+.+|+.+.|.|.+.
T Consensus 155 ~~~~~~~~~L~i~~v~~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~v~l~C~~~ 234 (315)
T 1itb_B 155 IHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLICNVT 234 (315)
T ss_dssp SSEEEETTEEEESSCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCCCCCCCEECSCCSEEEECCSSSCEEEEEEEE
T ss_pred ceEeecCceEEEEeceehhCcEEEEEEEcCCCCcEEEEEEEEEEEEecCCCCCCCEEecCCCCcEEEeCCCcEEEEEEEe
Confidence 4455556899999999999999999999 666664 334445444 34445443332 4678999999999999
Q ss_pred -CCCCCCcEEEEeecCcccCCCcc--------------------eeeEEEccCCCCC-CceEEEEEEeCCCCceeeeEEE
Q psy11131 80 -PYDSGPYLIAWFKDGRQIPGRTS--------------------STSLVINPVGRED-RGIYQCIARRSDGDVAQGSAEL 137 (150)
Q Consensus 80 -~p~~~~~~~~w~~~~~~~~~~~~--------------------~~~l~~~~~~~~~-~g~y~C~~~~~~g~~~~~~~~l 137 (150)
.| .+.+.|++++..+..... ...|.|.++..+| .|.|.|.|.|..| .....+.|
T Consensus 235 g~P---~p~i~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G-~~~~~~~l 310 (315)
T 1itb_B 235 GQL---SDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHG-IDAAYIQL 310 (315)
T ss_dssp ECT---TSEEEEEETTEECCTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGGGGTSCEEEEEECTTC-CEEEEEEE
T ss_pred cCC---CCeeEEEECCEECCcccccccccceeeeccCCCceeEEEEEEEEeecCHHHcCCceEEEEecCCC-ceeEEEEE
Confidence 99 899999999887765321 2389999999999 9999999999999 57778887
Q ss_pred EEcC
Q psy11131 138 QLGG 141 (150)
Q Consensus 138 ~v~~ 141 (150)
.|.+
T Consensus 311 ~v~~ 314 (315)
T 1itb_B 311 IYPV 314 (315)
T ss_dssp ECCC
T ss_pred EecC
Confidence 7643
No 64
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.80 E-value=1.6e-18 Score=107.48 Aligned_cols=121 Identities=15% Similarity=0.154 Sum_probs=90.4
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCc
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGR 95 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~ 95 (150)
.+|.|.+++.+|+|.|+|.+.+..+.....+.|.|..++..... ......+|+.+.|.|.+. .| .|.+.|++++.
T Consensus 67 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~p~~-~~~~~~~g~~v~l~C~~~g~P---~p~v~W~~~~~ 142 (202)
T 3bp6_B 67 ALFHIPSVQVRDSGQYRCLVICGAAWDYKYLTVKVKASYMRIDT-RILEVPGTGEVQLTCQARGYP---LAEVSWQNVSV 142 (202)
T ss_dssp EEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCCCEEE-EEEECTTTCCEEEEEEEEEBS---CCEEEETTCCS
T ss_pred eEEEECCCCHHHCcEEEEEEEeCCCcceEEEEEEecCCCCcccE-EEEecCCCCeEEEEEEccccC---CceEEEEeCCC
Confidence 57999999999999999999998887788888888865311100 001345799999999999 99 99999998776
Q ss_pred ccCCCc------ceeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCc
Q psy11131 96 QIPGRT------SSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGT 142 (150)
Q Consensus 96 ~~~~~~------~~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~ 142 (150)
.+.... ....+.+..+...|.|.|.|.+.|..| .....+.+.|.++
T Consensus 143 ~~~~~~~~~~~~~~~~~~i~~v~~~d~G~Y~C~a~N~~g-~~~~~~~l~v~~~ 194 (202)
T 3bp6_B 143 PANTSHIRTPEGLYQVTSVLRLKPQPSRNFSCMFWNAHM-KELTSAIIDPLSR 194 (202)
T ss_dssp CCEEEEEECTTSCEEEEEEEEECCCTTCCEEEEEEETTT-TEEEEEEECC---
T ss_pred CccCceeeCCCCCEEEEEEEEEEcCCCCEEEEEEEcCCc-ccccEEEEEecCc
Confidence 542111 134566778888999999999999999 5677777776543
No 65
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.80 E-value=1.7e-18 Score=110.44 Aligned_cols=118 Identities=21% Similarity=0.333 Sum_probs=90.0
Q ss_pred CCceEEeC---CeEEEcCCCCCCCeEEEEEeccCCcc-----eeEEEEEEEecC---ceEEe-CCCcEEEecCCcEEEEE
Q psy11131 9 GPRTRVLG---PILAIEGVTAEDSGTYRCSSSNIGGE-----ATAEVRLQVSTP---YRVDV-NPPLLSVHLDGSANFQC 76 (150)
Q Consensus 9 ~~~~~~~~---~~l~i~~~~~~d~G~Y~C~~~~~~~~-----~~~~~~l~v~~~---~~~~~-~~~~~~~~~g~~~~l~C 76 (150)
..|+.+.. .+|.|.+++.+|+|.|+|.+.+..+. ....+.|.|..+ +.+.. .+....+.+|+.+.|.|
T Consensus 79 ~~r~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C 158 (250)
T 2fbo_J 79 LGRASVANLAAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTC 158 (250)
T ss_dssp TTTEECSCTTSCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECC
T ss_pred CceEEeccCCcceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEE
Confidence 34555543 58999999999999999999986553 245778888764 23333 33345667899999999
Q ss_pred Eec-CCCCCCcEEEEeecCcccCCCc------------------------c-----eeeEEEccCCCCCCceEEEEEEeC
Q psy11131 77 EIT-PYDSGPYLIAWFKDGRQIPGRT------------------------S-----STSLVINPVGREDRGIYQCIARRS 126 (150)
Q Consensus 77 ~~~-~p~~~~~~~~w~~~~~~~~~~~------------------------~-----~~~l~~~~~~~~~~g~y~C~~~~~ 126 (150)
.+. .| .|.+.|++++..+.... . ...|.|.++..+|.|.|.|.+.|.
T Consensus 159 ~~~g~p---~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~ 235 (250)
T 2fbo_J 159 PCTDCA---NANVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFSGARNLVIRAAKITDAGRVWCELATG 235 (250)
T ss_dssp CEESCT---TCEEEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEETTTEEEECSCCGGGCEEEEEEEESS
T ss_pred EecCCC---CCeeEEEeCCCcccccccCcceeEeccCCCCccccCceEecccccCCccEEEEecCCcccCEEEEEEecCC
Confidence 999 88 88999999876554311 1 258999999999999999999997
Q ss_pred CCC
Q psy11131 127 DGD 129 (150)
Q Consensus 127 ~g~ 129 (150)
.|.
T Consensus 236 ~g~ 238 (250)
T 2fbo_J 236 QGE 238 (250)
T ss_dssp SSG
T ss_pred ccc
Confidence 663
No 66
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.80 E-value=1.6e-18 Score=112.86 Aligned_cols=134 Identities=16% Similarity=0.219 Sum_probs=100.5
Q ss_pred CCCCceEEeC-CeEEEcCCCCCCCeEEEEEeccCCcce-eEEEEEEEec----CceEEeCCCcEEEecCCcEEEEEEec-
Q psy11131 7 LPGPRTRVLG-PILAIEGVTAEDSGTYRCSSSNIGGEA-TAEVRLQVST----PYRVDVNPPLLSVHLDGSANFQCEIT- 79 (150)
Q Consensus 7 ~~~~~~~~~~-~~l~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~v~~----~~~~~~~~~~~~~~~g~~~~l~C~~~- 79 (150)
..+.++.... +.|.|.+++.+|+|.|+|.+.+..+.. +..+.|.|.. +|.+...+....+.+|+.+.|.|.+.
T Consensus 133 ~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~v~l~C~~~~ 212 (292)
T 4dkd_C 133 MRHTNYSFSPWHGFTIHRAKFIQSQDYQCSALMGGRKVMSISIRLKVQKVIPGPPALTLVPAELVRIRGEAAQIVCSASS 212 (292)
T ss_dssp CSSCCEECCSSSCCEETTCCGGGCSEEEEEECSTTSCEECCCEEEEEECCCCSSCEEEEESSCBCCCSSSCEEEEEEEEE
T ss_pred ccCCcccccCCceEEECCCCHHHCeEEEEEEEeCCCceeEEEEEEEEeCCCCCCCeEEccCCceeEecCCCEEEEEEecC
Confidence 3444555444 669999999999999999999876643 4478888886 67776666655567999999999998
Q ss_pred CCCCCCcEEEEeecCcccCCCcc----------eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCcC
Q psy11131 80 PYDSGPYLIAWFKDGRQIPGRTS----------STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGTR 143 (150)
Q Consensus 80 ~p~~~~~~~~w~~~~~~~~~~~~----------~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p 143 (150)
.|. ...+.|.+++..+..... ...|.|.++..+|.|.|.|.+.|..| ..+..+.|.|.+..
T Consensus 213 ~~~--~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g-~~~~~~~l~V~~~~ 283 (292)
T 4dkd_C 213 VDV--NFDVFLQHNNTKLAIPQQSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQG-KHSTSMFFRVVESA 283 (292)
T ss_dssp SSS--CCEEECCBSSCCCCCCBEEEEETTEEEEEEEEEESSCCTTSCEEEEEEEECSSC-EEEEEEEECC----
T ss_pred CCC--ceEEEEeCCCcccccCccceeccceeeeEEEEEECccChhcCeEEEEEEecCCC-CceeEEEEEEeeCC
Confidence 551 467888887765543221 35899999999999999999999999 67888888887654
No 67
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.80 E-value=2.6e-18 Score=112.69 Aligned_cols=120 Identities=29% Similarity=0.457 Sum_probs=97.5
Q ss_pred CeEEEcCCCC-CCCeEEEEEeccCCcceeEEEEEEEecC-------ceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcE
Q psy11131 17 PILAIEGVTA-EDSGTYRCSSSNIGGEATAEVRLQVSTP-------YRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYL 87 (150)
Q Consensus 17 ~~l~i~~~~~-~d~G~Y~C~~~~~~~~~~~~~~l~v~~~-------~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~ 87 (150)
..|.|.++.. +|+|.|+|.+.+..|.....+.|.|... |.+...+....+.+|+.+.|.|.+. .| .+.
T Consensus 63 ~~L~i~~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~p~~~p~i~~~~~~~~v~~g~~v~l~C~~~g~p---~~~ 139 (304)
T 2yd9_A 63 AVLRIQPLRTPRDENVYECVAQNSVGEITVHAKLTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAASGNP---DPE 139 (304)
T ss_dssp EEEEECSCCTTTTCSEEEEEEECSSCEECCEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEECCEEECSS---CCE
T ss_pred eEEEEecccccCCCeEEEEEEECCCCeEEEEEEEEEeccccCCCCCCeeecCCccEEEeCCCeEEEEEECccCC---CCe
Confidence 4699999998 9999999999998888888889999864 5566667777889999999999999 88 899
Q ss_pred EEEeecCcccCCCcc--------eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEE
Q psy11131 88 IAWFKDGRQIPGRTS--------STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQL 139 (150)
Q Consensus 88 ~~w~~~~~~~~~~~~--------~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v 139 (150)
+.|++++..+..... ...|.|.++...|.|.|.|.+.|..|...+....+.|
T Consensus 140 v~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v 199 (304)
T 2yd9_A 140 ITWFKDFLPVDPSASNGRIKQLRSGALQIESSEETDQGKYECVATNSAGVRYSSPANLYV 199 (304)
T ss_dssp EEEEETTEECCGGGGTTSEEECTTSCEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred EEEEECCEECcCCCCcceEEeCCCeEEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEE
Confidence 999999876643211 4589999999999999999999998843333244444
No 68
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.80 E-value=2.6e-19 Score=117.55 Aligned_cols=128 Identities=15% Similarity=0.142 Sum_probs=97.3
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcc--eeEEEEEEEecCceEEeCC-CcEEEecCCcEEEEEEec-CCCCCCc-EEEEe
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGE--ATAEVRLQVSTPYRVDVNP-PLLSVHLDGSANFQCEIT-PYDSGPY-LIAWF 91 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~--~~~~~~l~v~~~~~~~~~~-~~~~~~~g~~~~l~C~~~-~p~~~~~-~~~w~ 91 (150)
+.|.|.++...|.|.|+|.+.|..+. ....+.|.|..+|.+...+ ....+..|+.+.|.|.+. .| .| .+.|+
T Consensus 172 s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P---~p~~v~W~ 248 (308)
T 4fom_A 172 SQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQYAPEVSVTGYDGNWFVGRKGVNLKCNADANP---PPFKSVWS 248 (308)
T ss_dssp EEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCCEEEEECCBCCCSCEETTCCSCEEECCEEEES---CEEEEECC
T ss_pred ccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEecCCeeEEcccceeeeeccccEEEEEEEecCC---CCcEEEEE
Confidence 46899999999999999999987655 3445666677766654433 334567789999999999 87 77 69999
Q ss_pred ecCcccCCCcc---eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCcCccccc
Q psy11131 92 KDGRQIPGRTS---STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGTRNIKHY 148 (150)
Q Consensus 92 ~~~~~~~~~~~---~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p~~~~~ 148 (150)
+++..+..... ...+.+..+..+|.|.|.|.|.|..| ..+..+.|.|.++|....|
T Consensus 249 k~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~A~N~~G-~~~~~~~l~V~~~P~~~~~ 307 (308)
T 4fom_A 249 RLDGQWPDGLLASDNTLHFVHPLTFNYSGVYICKVTNSLG-QRSDQKVIYISDPPHHHHH 307 (308)
T ss_dssp BSSSCCCSSCBCSTTEEECCSCCCSCCCSEEEEEEEETTE-EEEEEEECCEECCC-----
T ss_pred ECCeECCCcEEEcCCeEEEECCCChhhCEEEEEEEEeCCC-cEEEEEEEEEEcCCCCccC
Confidence 98877654332 44566788999999999999999999 6788899999998865443
No 69
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.80 E-value=1.8e-17 Score=109.93 Aligned_cols=130 Identities=22% Similarity=0.206 Sum_probs=99.0
Q ss_pred CCCceEEeCCeEEEcCCCCCCCeEEEEEeccC--Ccce----eEEEEEEEecCc----eEEeCCCcEEEecCCcEEEEEE
Q psy11131 8 PGPRTRVLGPILAIEGVTAEDSGTYRCSSSNI--GGEA----TAEVRLQVSTPY----RVDVNPPLLSVHLDGSANFQCE 77 (150)
Q Consensus 8 ~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~--~~~~----~~~~~l~v~~~~----~~~~~~~~~~~~~g~~~~l~C~ 77 (150)
.+.++...++.|.|.+++.+|+|.|+|.+.|. .|.. +..+.|.|..++ .+. .+....+.+|+.+.|.|.
T Consensus 173 ~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~~~~~~~-~~~~~~v~~G~~~~l~C~ 251 (329)
T 3oq3_B 173 DGTKYSQSGQNLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQDHRFKLI-LDPKINVTIGEPANITCT 251 (329)
T ss_dssp SSSSEEEETTEEEECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCCCCCEEEE-CCSEEEECTTSCEEEEEE
T ss_pred CCceEecCCCEEEEeecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEECCCCCCCcee-cCCeeEEecCCCEEEEEE
Confidence 34566666789999999999999999999976 5443 334778888665 333 566678899999999999
Q ss_pred ec-CCCCCCc-EEEEeecCccc-CCCc------------ceeeEEEccCCCCCCc-eEEEEEEeCCCCceeeeEEEEE
Q psy11131 78 IT-PYDSGPY-LIAWFKDGRQI-PGRT------------SSTSLVINPVGREDRG-IYQCIARRSDGDVAQGSAELQL 139 (150)
Q Consensus 78 ~~-~p~~~~~-~~~w~~~~~~~-~~~~------------~~~~l~~~~~~~~~~g-~y~C~~~~~~g~~~~~~~~l~v 139 (150)
+. .|....+ .+.|++++..+ .... ....|.|.++..+|.| .|.|.+.|..| .....+.|.|
T Consensus 252 ~~g~p~~~~~i~v~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~~Y~C~a~N~~G-~~~~~~~l~v 328 (329)
T 3oq3_B 252 AVSTSLLVDDVLIDWENPSGWIIGLDFGVYSILTSSGGITEATLYFENVTEEYIGNTYTCRGHNYYF-DKTLTTTVVL 328 (329)
T ss_dssp EEETTCCTTCCEEEEECTTSCBCCBCSSEEEEEEEETTEEEEEEEESSCCGGGTTCEEEEEEECSSC-EEEEEEEEEE
T ss_pred EEECCCCCCCcEEEEEECCeeeeccCCceeeeecccCceeEeEEEEEeccHHHCCCcEEEEEEecCC-ceEEEEEEEe
Confidence 99 5411156 89999988764 2221 1457999999999999 99999999999 5666666665
No 70
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.80 E-value=1.9e-19 Score=120.30 Aligned_cols=119 Identities=18% Similarity=0.188 Sum_probs=99.0
Q ss_pred CeEEEcCCCCCCCe-EEEEEeccCCcceeEEEEEEEecCceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecC
Q psy11131 17 PILAIEGVTAEDSG-TYRCSSSNIGGEATAEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDG 94 (150)
Q Consensus 17 ~~l~i~~~~~~d~G-~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~ 94 (150)
++|.|.+++.+|+| .|+|.+.+..|..+..+.|.|..+|.+.. ....+|+.+.|.|.+. .| .|.+.|++++
T Consensus 212 ~~L~i~~v~~~D~G~~Y~C~a~n~~g~~~~~~~l~V~~~P~i~~----~~~~~g~~v~l~C~~~g~P---~p~i~W~~~g 284 (347)
T 2ifg_A 212 LGLTLANVTSDLNRKNVTCWAENDVGRAEVSVQVNVSFPASVQL----HTAVEMHHWCIPFSVDGQP---APSLRWLFNG 284 (347)
T ss_dssp EEEEEESCCSTTTTCCEEECCEETTEECCEEECCCCBEEEEEEE----CCCEESSSEEEEEEEEEES---CCEEEEEETT
T ss_pred ceEEEeeCChHHCCCeEEEEEEcCCCCEEEEEEEEEcCCCeeee----ccCccCceEEEEEEeeecC---CCcEEEEeCC
Confidence 67999999999999 99999999888888888888887776411 1234689999999999 99 9999999998
Q ss_pred cccCCCcc---------------eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCcC
Q psy11131 95 RQIPGRTS---------------STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGTR 143 (150)
Q Consensus 95 ~~~~~~~~---------------~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p 143 (150)
..+..... ...|.|.++..+|.|.|+|.|.|..| ..+..+.+.|.++|
T Consensus 285 ~~l~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G-~~~~~~~l~V~~~P 347 (347)
T 2ifg_A 285 SVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFG-QASASIMAAFMDNP 347 (347)
T ss_dssp EECCCCSSEEEEECCCCTTCCCEEEEEEESSCCGGGCEEEEEEEEETTE-EEEEEEEECSCCCC
T ss_pred EECCCCcceeeEEEeecCCCcccceEEEECCCCcccCceEEEEEecCCC-ceeeEEEEEecCCC
Confidence 87653321 34599999999999999999999999 67888888887765
No 71
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.79 E-value=1.3e-18 Score=107.04 Aligned_cols=120 Identities=18% Similarity=0.279 Sum_probs=90.1
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcc--eeEEEEEEEec---CceEEeCCCcEEEecCCcEEEEEEecCCCCCCcEEEEe
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGE--ATAEVRLQVST---PYRVDVNPPLLSVHLDGSANFQCEITPYDSGPYLIAWF 91 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~--~~~~~~l~v~~---~~~~~~~~~~~~~~~g~~~~l~C~~~~p~~~~~~~~w~ 91 (150)
+.|.|.+++.+|+|.|+|.+.+..+. .+..+.|.|.+ +|.+...+ ...+.+|+.+.|.|.+..+ .+.+.|+
T Consensus 57 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~s~~~~l~V~~~~~~p~i~~~p-~~~v~~G~~v~L~C~~~~~---~~~~~w~ 132 (188)
T 1oll_A 57 VKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLLDLVVTEMYDTPTLSVHP-GPEVISGEKVTFYCRLDTA---TSMFLLL 132 (188)
T ss_dssp EEEEESSCCGGGCEEEEEEEEETTEECCCCCCEEEEEESCSCCCEEEEES-CSEEETTCEEEEEEECSSS---CSEEEEE
T ss_pred eEEEeCcCCcccCeEEEEEecCCCCCCCCCCceEEEecccCCCCeEEECC-CCccccCCEEEEEEEcCCC---CCEEEEE
Confidence 67999999999999999999875442 34556777764 44554434 3457899999999998744 5689999
Q ss_pred ecCcccCC----CcceeeEEEccCCCCCCceEEEEEEeCCC--CceeeeEEEEEc
Q psy11131 92 KDGRQIPG----RTSSTSLVINPVGREDRGIYQCIARRSDG--DVAQGSAELQLG 140 (150)
Q Consensus 92 ~~~~~~~~----~~~~~~l~~~~~~~~~~g~y~C~~~~~~g--~~~~~~~~l~v~ 140 (150)
+++..+.. ......|.|.++..+|.|.|.|.+.|... ...+..+.|.|.
T Consensus 133 k~g~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~ 187 (188)
T 1oll_A 133 KEGRSSHVQRGYGKVQAEFPLGPVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLVT 187 (188)
T ss_dssp EESSSCEEEEEECSSEEEEEEEECCGGGCEEEEEECEEETTEECCCCCCEEEEEE
T ss_pred ECCccccccccCCCceeEEEECCCCcCCCcEEEEEEEcCCCcCCCCCCcEEEEec
Confidence 99876542 11257899999999999999999987642 235667777764
No 72
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.79 E-value=2.2e-18 Score=104.15 Aligned_cols=118 Identities=15% Similarity=0.222 Sum_probs=92.6
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCceEEeCCCcEEEecCCcEEEEEEec--CCCCCCcEEEEeecC
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCEIT--PYDSGPYLIAWFKDG 94 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~--~p~~~~~~~~w~~~~ 94 (150)
..+.|.+++.+|+|.|+|.+.+.. .+..+.|.|..++.....+ ...+.+|+.+.|.|.+. .| .+.+.|++++
T Consensus 51 ~~~~~~~~~~~d~G~Y~C~~~~~~--~s~~~~l~v~~~~~~~~~~-~~~~~~g~~~~l~C~~~~~~p---~~~~~W~~~g 124 (170)
T 3ry4_A 51 QPSYRFKANNNDSGEYTCQTGQTS--LSDPVHLTVLFEWLVLQTP-HLEFQEGETIMLRCHSWKDKP---LVKVTFFQNG 124 (170)
T ss_dssp SSEEEEECCGGGCEEEEEEETTSB--CCCCEEEEEECCSEEEECS-CSEECTTCCEEEEEEEGGGCC---EEEEEEEETT
T ss_pred cceEEEecccccCeEEEEEEeCCC--ceEeEEEEEECCceEecCC-CceeecCCeEEEEEECCCCCC---CceEEEEECC
Confidence 557888999999999999998743 3445677888765544433 35678999999999995 56 7999999998
Q ss_pred cccCCCcceeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEc
Q psy11131 95 RQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLG 140 (150)
Q Consensus 95 ~~~~~~~~~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~ 140 (150)
..+........|.|.++..+|.|.|.|.+.|..|...+..+.|.|+
T Consensus 125 ~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~ 170 (170)
T 3ry4_A 125 KSQKFSHLDPTFSIPQANHSHSGDYHCTGNIGYTLFSSKPVTITVQ 170 (170)
T ss_dssp EEEEEESSCCEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEC
T ss_pred eEccccCCCCeEEEEeccccCCEEEEEEEEeCcCccccccEEEEEC
Confidence 8765333367899999999999999999999988446667777663
No 73
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.79 E-value=7.2e-19 Score=116.40 Aligned_cols=124 Identities=14% Similarity=0.185 Sum_probs=101.3
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCceEEeC-CCcEEEecCCcEEEEEEec-CCCCCCcE-EEEeec
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVDVN-PPLLSVHLDGSANFQCEIT-PYDSGPYL-IAWFKD 93 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~-~~~~~~~~g~~~~l~C~~~-~p~~~~~~-~~w~~~ 93 (150)
..|.|.++...|.|.|+|.+.+..+..+..+.|.|..+|.+... +....+.+|+.+.|.|.+. .| .+. +.|+++
T Consensus 194 ~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p---~p~~i~W~~~ 270 (331)
T 3u83_A 194 SRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQYEPEVTIEGFDGNWYLQRMDVKLTCKADANP---PATEYHWTTL 270 (331)
T ss_dssp EEEEECCCGGGTTCEEEEEEEETTEEEEEEEECCEEEEEEEEEECCCSCCBTTCCCEEEEEEEEEES---CCCEEEEEET
T ss_pred EEEEEEeccccCCCEEEEEEecCCCcceeeEEEEEecCCeEEEecCCCceEeCCCeEEEEEeCcCCC---CCCEEEEEEC
Confidence 56889999999999999999998888888889999877766533 3334577899999999999 88 777 999999
Q ss_pred CcccCCCcc--eeeEEEc-cCCCCCCceEEEEEEeCCCCceeeeEEEEEcCcCc
Q psy11131 94 GRQIPGRTS--STSLVIN-PVGREDRGIYQCIARRSDGDVAQGSAELQLGGTRN 144 (150)
Q Consensus 94 ~~~~~~~~~--~~~l~~~-~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p~ 144 (150)
+..+..... ...|.|. ++..+|.|.|.|.+.|..| .....+.|.|.+.+.
T Consensus 271 ~~~~~~~~~~~~~~L~i~~~v~~~d~G~Y~C~a~N~~G-~~~~~~~l~V~~~~~ 323 (331)
T 3u83_A 271 NGSLPKGVEAQNRTLFFKGPINYSLAGTYICEATNPIG-TRSGQVEVNITEAAA 323 (331)
T ss_dssp TBSCCTTEEEETTEEEECSCCCGGGCEEEEEEEEETTE-EEEEEEEECCBC---
T ss_pred CCcccccceecCcEEEEeCCCccccCeEEEEEEEeccc-cceEEEEEEEeccch
Confidence 887754432 5689999 8999999999999999999 578888888877643
No 74
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.79 E-value=1.1e-17 Score=107.75 Aligned_cols=119 Identities=19% Similarity=0.296 Sum_probs=89.2
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcc--eeEEEEEEEecCceEEeCCCcEEEecCCcEEEEEEe---c-CCCCCCcEEEE
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGE--ATAEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCEI---T-PYDSGPYLIAW 90 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~--~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~---~-~p~~~~~~~~w 90 (150)
.+|.|.+++.+|+|.|+|.+.+..+. ....+.|.|.. ..+....+.+|+.+.|.|.+ . .| .+.+.|
T Consensus 84 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~-----~~p~~~~v~~G~~v~L~C~~~~~~~~p---~~~v~W 155 (268)
T 3mj6_A 84 GSLLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVLP-----EEPRDLRVRVGDTTQMRCSIQSTEEKR---VTKVNW 155 (268)
T ss_dssp CCEEECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEEC-----CCCSEEEEETTCCEEECCBCEESSSSC---CCEEEE
T ss_pred EEEEECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEec-----cCCCccccccCCcEEEEEEecCCCCCC---ccceEE
Confidence 78999999999999999999876443 34455555542 23456778899999999999 4 67 899999
Q ss_pred eecCccc-CC----------------------------C---cceeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEE
Q psy11131 91 FKDGRQI-PG----------------------------R---TSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQ 138 (150)
Q Consensus 91 ~~~~~~~-~~----------------------------~---~~~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~ 138 (150)
++++... .. . .....|.|.++..+|.|.|.|.+.|..| .....+.|.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g-~~~~~~~l~ 234 (268)
T 3mj6_A 156 MFSSGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKL-ESRKTIVLH 234 (268)
T ss_dssp EEECTTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTE-EEEEEEEEE
T ss_pred EecCCCCCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEEEECcCChhhCeEEEEEEEcCCc-eEEEEEEEE
Confidence 9843211 00 0 1156899999999999999999999888 677888888
Q ss_pred EcCcCc
Q psy11131 139 LGGTRN 144 (150)
Q Consensus 139 v~~~p~ 144 (150)
|...|+
T Consensus 235 V~~~~p 240 (268)
T 3mj6_A 235 VVQDEF 240 (268)
T ss_dssp EECC--
T ss_pred EEcCCC
Confidence 854443
No 75
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.79 E-value=1.8e-18 Score=108.31 Aligned_cols=119 Identities=26% Similarity=0.407 Sum_probs=90.5
Q ss_pred EEcCCCCCCCeEEEEEeccCCcce-eEEEEEEEec-CceEEeCCCcEEEecCCcEEEEEEe-c-CCCCCCcEEEEeecCc
Q psy11131 20 AIEGVTAEDSGTYRCSSSNIGGEA-TAEVRLQVST-PYRVDVNPPLLSVHLDGSANFQCEI-T-PYDSGPYLIAWFKDGR 95 (150)
Q Consensus 20 ~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~v~~-~~~~~~~~~~~~~~~g~~~~l~C~~-~-~p~~~~~~~~w~~~~~ 95 (150)
.|.+++..|+|.|+|.+.+..+.. +....|.|.. ++.+...+....+.+|+.+.|.|.+ . .| .+.+.|++++.
T Consensus 72 ~i~~v~~~d~G~Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~g~p---~~~v~W~~~g~ 148 (217)
T 2vr9_A 72 TMQGKKEQDGGEYWCVAKNRVGQAVSRHASLQIAVLRDDFRVEPKDTRVAKGETALLECGPPKGIP---EPTLIWIKDGV 148 (217)
T ss_dssp CCBSSSCBCCEEEEEEEEETTEEEECCCEEEEECEECCSCSBCCCCEEECTTSCEEECCBCCCEES---CCEEEEEETTE
T ss_pred EeccCCcccCceEEEEEecCCCccccccceEEEEEeCCCcEECCCccEEcCCCeEEEEEECCCCCC---CCeEEEEECCc
Confidence 688999999999999999877654 3355666654 3444455666778899999999998 6 88 89999999987
Q ss_pred ccCCC--------cc-----eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcC
Q psy11131 96 QIPGR--------TS-----STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGG 141 (150)
Q Consensus 96 ~~~~~--------~~-----~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~ 141 (150)
.+... .. ...|.|.++..+|.|.|.|.+.|..|........+.+..
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~~lv~~~ 207 (217)
T 2vr9_A 149 PLDDLKAMSFGASSRVRIVDGGNLLISNVEPIDEGNYKCIAQNLVGTRESSYAKLIVQV 207 (217)
T ss_dssp EECCCCCC---CCCSEEEETTTEEEESSCCSTTCEEEEEEEEETTEEEECCCEEEEEC-
T ss_pred CCCcccccccccCCcEEecCCCcEEEeeCCHHHCeEEEEEEEcccceeccccEEEEEEe
Confidence 76521 11 357999999999999999999999994444444554443
No 76
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.79 E-value=4.5e-19 Score=117.59 Aligned_cols=131 Identities=25% Similarity=0.421 Sum_probs=63.7
Q ss_pred CCCCceEEeCCeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCce----------------------EE----eC
Q psy11131 7 LPGPRTRVLGPILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYR----------------------VD----VN 60 (150)
Q Consensus 7 ~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~----------------------~~----~~ 60 (150)
..+.++.+..+.|.|.+++.+|+|.|+|.+.+. +.....+.|.|...+. +. ..
T Consensus 51 ~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~-~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~ 129 (334)
T 1ry7_B 51 VPSERVLVGPQRLQVLNASHEDSGAYSCRQRLT-QRVLCHFSVRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMD 129 (334)
T ss_dssp ---------------------------------------------------------------------CCCCSCCTTCC
T ss_pred CCcccEEeccceEEEeecccccCEEEEEEEEeC-CeEEEEEEEEEeccCccccccccccccccccccCCCCEEecccccc
Confidence 344566665688999999999999999999988 7667777777765321 11 11
Q ss_pred CCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCcc---------eeeEEEccCCCCCCceEEEEEEeCCCCc
Q psy11131 61 PPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRTS---------STSLVINPVGREDRGIYQCIARRSDGDV 130 (150)
Q Consensus 61 ~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~~---------~~~l~~~~~~~~~~g~y~C~~~~~~g~~ 130 (150)
.....+.+|+.+.|.|.+. .| .+.+.|++++..+..... ...|.|.++...|.|.|.|.+.|..| .
T Consensus 130 ~~~~~v~~g~~v~l~C~~~g~p---~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g-~ 205 (334)
T 1ry7_B 130 KKLLAVPAANTVRFRCPAAGNP---TPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFG-S 205 (334)
T ss_dssp CCEEEEETTCCEEEECCCCCSS---CCEEECCBTTBCCCTTSSTTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTE-E
T ss_pred ceeEEecCCCcEEEEEEccCCC---CCeEEEEECCEECcccccccceecccceEEEEECCCCcccCEEEEEEEEeCCC-C
Confidence 1235678999999999998 88 899999998876653321 45799999999999999999999988 5
Q ss_pred eeeeEEEEEcCc
Q psy11131 131 AQGSAELQLGGT 142 (150)
Q Consensus 131 ~~~~~~l~v~~~ 142 (150)
....+.|.|...
T Consensus 206 ~~~~~~l~V~~~ 217 (334)
T 1ry7_B 206 IRQTYTLDVLER 217 (334)
T ss_dssp EEEEEEEEEECC
T ss_pred EEEEEEEEEecC
Confidence 777788888763
No 77
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.79 E-value=1.1e-17 Score=118.34 Aligned_cols=134 Identities=19% Similarity=0.260 Sum_probs=101.7
Q ss_pred CCceEEeC----C--eEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCceEEeCCCcEEEecCCcEEEEEEec-CC
Q psy11131 9 GPRTRVLG----P--ILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCEIT-PY 81 (150)
Q Consensus 9 ~~~~~~~~----~--~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p 81 (150)
+.|+.+.. + +|.|.+++.+|+|.|+|.+ |..|.....+.|.|...+.....+....+.+|+.+.|.|.+. .+
T Consensus 392 ~~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a-n~~g~~~~~~~l~V~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~~ 470 (585)
T 2ocw_A 392 EGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLT-NGDTLWRTTVEIKIIEGEPNLKVPGNVTAVLGETLKVPCHFPCKF 470 (585)
T ss_pred CCCEEEeccCCCcEEEEEECCCChhhCEEEEEcc-cCCCccceeEEEEEecCccccccCCceeEecCCcEEEEEEecCCC
Confidence 45555542 3 3999999999999999999 777878888889998654433346667789999999999985 22
Q ss_pred -CCCCcEEEEeecCcccCCCc---------------ceeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCcC
Q psy11131 82 -DSGPYLIAWFKDGRQIPGRT---------------SSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGTR 143 (150)
Q Consensus 82 -~~~~~~~~w~~~~~~~~~~~---------------~~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p 143 (150)
..-.+.+.|++++..+.... ....|.|.++..+|.|.|.|.|.|..|......+.|.|..+|
T Consensus 471 ~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~~l~V~~~p 548 (585)
T 2ocw_A 471 SSYEKYWCKWNNTGCQALPSQDEGPSKAFVNCDENSRLVSLTLNLVTRADEGWYWCGVKQGHFYGETAAVYVAVEERK 548 (585)
T ss_pred CCCccEEEEEeecCceeeeccCCCCCcceEEecCcccEEEEEECCCCcccCeEEEEEeEeCCCccEEEEEEEEEEeee
Confidence 10167899999987653221 025899999999999999999999998544555888888766
No 78
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.79 E-value=2.5e-18 Score=125.70 Aligned_cols=124 Identities=21% Similarity=0.371 Sum_probs=103.9
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCc
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGR 95 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~ 95 (150)
+.|.|.++..+|+|.|+|.+.|..|.....+.|.|..+|.+...+....+.+|+.+.|.|.+. .| .|.+.|.+++.
T Consensus 677 ~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~P---~p~i~W~k~~~ 753 (816)
T 3dmk_A 677 SVLTIEAVEASHAGNFTCHARNLAGHQQFTTPLNVYVPPRWILEPTDKAFAQGSDAKVECKADGFP---KPQVTWKKAVG 753 (816)
T ss_dssp EEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECEEEEEEEEECCCCEEEETTCCEEEECEEEEES---CCEEECCEECS
T ss_pred eEEEEccCChhhCEEEEEEEEeCCccEEEEEEEEEEeCCceeeecccceecCCCcEEEEEEEecCC---CCeEEEEecCC
Confidence 579999999999999999999999998889999999998888888888889999999999999 89 89999999765
Q ss_pred ccCCC-------cc----eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCcCc
Q psy11131 96 QIPGR-------TS----STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGTRN 144 (150)
Q Consensus 96 ~~~~~-------~~----~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p~ 144 (150)
.+... .. ...|.|.++..+|.|.|.|.|.|..| ....++.+.....+.
T Consensus 754 ~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G-~~~~~v~~~~~~~~~ 812 (816)
T 3dmk_A 754 DTPGEYKDLKKSDNIRVEEGTLHVDNIQKTNEGYYLCEAINGIG-SGLSAVIMISVQAHH 812 (816)
T ss_dssp SSTTCCBCCCCBTTEEEETTEEEECSCCGGGCEEEEEEEECSSS-SCEEEEEEEEEEC--
T ss_pred CCCccccccccCCCEEecCCEEEECcCChhhCeEEEEEEEeCCC-CCcEEEEEEEeeccc
Confidence 43211 11 34799999999999999999999999 566666666655543
No 79
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.79 E-value=7.5e-18 Score=120.42 Aligned_cols=129 Identities=19% Similarity=0.254 Sum_probs=103.7
Q ss_pred ecCCCCceEEeC--CeEEEcCCCCCCCeEEEEEeccCCcce-eEEEEEEEecCce-EEeCCCcEEEecCCcEEEEEEec-
Q psy11131 5 LVLPGPRTRVLG--PILAIEGVTAEDSGTYRCSSSNIGGEA-TAEVRLQVSTPYR-VDVNPPLLSVHLDGSANFQCEIT- 79 (150)
Q Consensus 5 ~~~~~~~~~~~~--~~l~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~v~~~~~-~~~~~~~~~~~~g~~~~l~C~~~- 79 (150)
++..+.++.+.. +.|.|.++...|+|.|+|.+.|..|.. +..+.|.|..+|. ....+....+.+|+.+.|.|.+.
T Consensus 506 ~l~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g 585 (642)
T 1e07_A 506 SLPVSPRLQLSNGNRTLTLFNVTRNDARAYVCGIQNSVSANRSDPVTLDVLYGPDTPIISPPDSSYLSGANLNLSCHSAS 585 (642)
T ss_pred eCCCCCcEEEcCCCcEEEEeecChhcCceEEEEeEcCCCCccCCCEEEEEEeCCCcceecCCceeEEcCCcEEEEEEecc
Confidence 344455666543 689999999999999999999988764 3468888886543 44556667889999999999999
Q ss_pred CCCCCCcEEEEeecCcccCCCcceeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEc
Q psy11131 80 PYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLG 140 (150)
Q Consensus 80 ~p~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~ 140 (150)
.| .+.+.|++++..+.. ...|.|.++..+|.|.|.|.+.|..| ....++.|.|.
T Consensus 586 ~p---~p~v~W~~~g~~i~~---~~~L~i~~~~~~d~G~Y~C~a~N~~G-~~~~s~~l~V~ 639 (642)
T 1e07_A 586 NP---SPQYSWRINGIPQQH---TQVLFIAKITPNNNGTYACFVSNLAT-GRNNSIVKSIT 639 (642)
T ss_pred CC---CCeEEEEECCEECcc---CceEEECcccccCCeEEEEEEEeccc-CcceeEEEEEE
Confidence 89 899999999987653 35799999999999999999999999 46666666654
No 80
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.79 E-value=1.3e-18 Score=106.75 Aligned_cols=120 Identities=23% Similarity=0.318 Sum_probs=88.5
Q ss_pred CCeEEEcCCCCCCCeEEEEEeccCCcc--eeEEEEEEEec---CceEEeCCCcEEEecCCcEEEEEEecCCCCCCcEEEE
Q psy11131 16 GPILAIEGVTAEDSGTYRCSSSNIGGE--ATAEVRLQVST---PYRVDVNPPLLSVHLDGSANFQCEITPYDSGPYLIAW 90 (150)
Q Consensus 16 ~~~l~i~~~~~~d~G~Y~C~~~~~~~~--~~~~~~l~v~~---~~~~~~~~~~~~~~~g~~~~l~C~~~~p~~~~~~~~w 90 (150)
.+.|.|.+++.+|+|.|+|.+.+..+. .+..+.|.|.. +|.+...+ ...+.+|+.+.|.|.+..+ ++.+.|
T Consensus 51 ~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~V~~~~~~p~i~~~p-~~~v~~G~~v~l~C~~~~~---~~~~~w 126 (184)
T 2gi7_A 51 QAVLFIPAMKRSLAGRYRCSYQNGSLWSLPSDQLELVATGVFAKPSLSAQP-GPAVSSGGDVTLQCQTRYG---FDQFAL 126 (184)
T ss_dssp SSEEEESSCCGGGCEEEEEEEEETTEEBCCCCCEEEEEESSSCCCEEEEEC-CCSSCCTTCEEEEEECSSC---CCEEEE
T ss_pred ccEEEECcCChhhCceEEEEEEcCCCccCCCCCEEEEecCcCCCCEEEeCC-CceecCCCcEEEEEEcCCC---CcEEEE
Confidence 378999999999999999999987653 34556777753 34444433 2345689999999997744 569999
Q ss_pred eecCcccCCCcc----eeeEEEccCCCCCCceEEEEEEeCCCC----ceeeeEEEEE
Q psy11131 91 FKDGRQIPGRTS----STSLVINPVGREDRGIYQCIARRSDGD----VAQGSAELQL 139 (150)
Q Consensus 91 ~~~~~~~~~~~~----~~~l~~~~~~~~~~g~y~C~~~~~~g~----~~~~~~~l~v 139 (150)
++++..+..... ...|.|.++..+|.|.|.|.+.|..+. ..+..+.|.|
T Consensus 127 ~k~g~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V 183 (184)
T 2gi7_A 127 YKEGDPAPYKNPERWYRASFPIITVTAAHSGTYRCYSFSSRDPYLWSAPSDPLELVV 183 (184)
T ss_dssp EECCCCTTSCCCCEEEEESSSEEEETTCCSEEEEEEEECTTSTTBCCCCCCCEEEEC
T ss_pred EECCCcCcceecCCCceEEEEEccCCccCCeEEEEEEEeCCCCcccCCCCCcEEEEe
Confidence 999876653221 567889999999999999999997531 2355566654
No 81
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.78 E-value=4.7e-18 Score=107.19 Aligned_cols=120 Identities=20% Similarity=0.141 Sum_probs=82.5
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCceEEeCCCcEEEecCCcEEEEEEec--CCCCCCcEEEEeecC
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCEIT--PYDSGPYLIAWFKDG 94 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~--~p~~~~~~~~w~~~~ 94 (150)
.+|.|.+++.+|+|.|+|.+.|..+.......+.+.. .....+....+.+|..+.+.|.+. .| .|.+.|++++
T Consensus 83 ~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~v~~~~~~--~~~~~~~~~~~~~g~~v~l~c~~~g~~P---~p~i~W~k~~ 157 (226)
T 4f80_A 83 AALRIHNVTASDSGKYLCYFQDGDFYEKALVELKVAA--LGSDLHVDVKGYKDGGIHLECRSTGWYP---QPQIQWSNNK 157 (226)
T ss_dssp EEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEB--CCCCCEEEEEEEETTEEEEEEEEEEEBS---CCEEEEECTT
T ss_pred EEEEEeeCchHHCeeEEEEEECCCcEEEEEEEEeecc--ceecccceeeeccCCceeeEEEeccCCC---CCEEEEEECC
Confidence 4799999999999999999999777665554444433 222223345677899999999998 58 8999999865
Q ss_pred cccCCCc-c---------eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCc
Q psy11131 95 RQIPGRT-S---------STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGT 142 (150)
Q Consensus 95 ~~~~~~~-~---------~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~ 142 (150)
..+.... . ...+.+..+..+|.|.|+|.|.|..| .....+.+.|.+|
T Consensus 158 ~~~~~~~~~~~~~~~~g~~~v~s~l~v~~~d~G~YtC~a~N~~g-~~~~~~~v~v~ep 214 (226)
T 4f80_A 158 GENIPTVEAPVVADGVGLYAVAASVIMRGSSGEGVSCTIRSSLL-GLEKTASISIADP 214 (226)
T ss_dssp SCBCCCEECCCEECTTSCEEEEEEEEECC----CEEEEEEETTT-TEEEEEEECCCTT
T ss_pred ceEcCCCceEEEECCCCcEEEEEEEEechhcCcEEEEEEEeCCC-CeEEEEEEEECCC
Confidence 4332211 1 12233445677899999999999998 5777778877653
No 82
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.78 E-value=7.4e-19 Score=117.23 Aligned_cols=131 Identities=19% Similarity=0.237 Sum_probs=70.9
Q ss_pred CceEEeCCeEEEcCCCCCCCeEEEEEeccCC-cce---eEEEEEEEec------CceEEeCCCc--EEEecCCcEEEEEE
Q psy11131 10 PRTRVLGPILAIEGVTAEDSGTYRCSSSNIG-GEA---TAEVRLQVST------PYRVDVNPPL--LSVHLDGSANFQCE 77 (150)
Q Consensus 10 ~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~-~~~---~~~~~l~v~~------~~~~~~~~~~--~~~~~g~~~~l~C~ 77 (150)
.++...+..|.|.+++.+|+|.|+|.+.|.. +.. +..+.|.|.. +|.+...+.. ..+.+|+.+.|.|.
T Consensus 170 ~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~~~~~p~i~~~~~~~~~~v~~G~~v~l~C~ 249 (349)
T 4dep_C 170 NNVIPEGMNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIPCT 249 (349)
T ss_dssp SSEEEETTEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCGGGCCSCEEC----------------CCCEE
T ss_pred cceeecCCEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCCCCCCCeEecCCCceeEEEecCCcEEEEEE
Confidence 4455555789999999999999999999875 443 5667777775 3443332222 26778999999999
Q ss_pred ec-C----CCCCCcEEEEeecCcccCCCc-c-----------------eeeEEEccCCCCCC-ceEEEEEEeCCCCceee
Q psy11131 78 IT-P----YDSGPYLIAWFKDGRQIPGRT-S-----------------STSLVINPVGREDR-GIYQCIARRSDGDVAQG 133 (150)
Q Consensus 78 ~~-~----p~~~~~~~~w~~~~~~~~~~~-~-----------------~~~l~~~~~~~~~~-g~y~C~~~~~~g~~~~~ 133 (150)
+. . | .+.+.|++++..+.... . ...|.|.++..+|. |.|.|.+.|..| ....
T Consensus 250 ~~~~~~g~p---~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G-~~~~ 325 (349)
T 4dep_C 250 VYFSFLMDS---RNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKVTSEDLKRSYVCHARSAKG-EVAK 325 (349)
T ss_dssp EEECCCTTC---CCEEEEESSCC--------CCCCEEEECCTTCCEEEEECC-------------CEEEEECSSC-EEEE
T ss_pred EEEccCCCC---CCEEEEEECCEEccccCCccccccceeeecCCCcEEEEEEEEeeccHHHcCCcEEEEEEcCCC-cEEE
Confidence 98 4 5 78999999887765410 0 23489999999999 999999999999 6777
Q ss_pred eEEEEEcCcCc
Q psy11131 134 SAELQLGGTRN 144 (150)
Q Consensus 134 ~~~l~v~~~p~ 144 (150)
.+.|.|..++|
T Consensus 326 ~~~l~v~~~~p 336 (349)
T 4dep_C 326 AAKVKQKVPAP 336 (349)
T ss_dssp ECC--------
T ss_pred EEEEeeecCCC
Confidence 78888876444
No 83
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.78 E-value=1.2e-17 Score=113.09 Aligned_cols=132 Identities=24% Similarity=0.363 Sum_probs=103.2
Q ss_pred CceEEeC-CeEEEcCCCCCCCeEEEEEeccCCcc-eeEEEEEEEecCc------eEEeCCCcEEEecCCcEEEEEEec-C
Q psy11131 10 PRTRVLG-PILAIEGVTAEDSGTYRCSSSNIGGE-ATAEVRLQVSTPY------RVDVNPPLLSVHLDGSANFQCEIT-P 80 (150)
Q Consensus 10 ~~~~~~~-~~l~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~~l~v~~~~------~~~~~~~~~~~~~g~~~~l~C~~~-~ 80 (150)
.+..... +.|.|.++..+|+|.|+|.+.+..+. ......+.|...+ .+...+....+.+|+.+.|.|.+. .
T Consensus 169 ~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~ 248 (403)
T 3laf_A 169 SRVVVLPSGALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDPGLHRQLYFLQRPSNVIAIEGKDAVLECCVSGY 248 (403)
T ss_dssp CSEEECTTSCEEECSCCGGGCEEEEEEEECSSCCCBCCCEEEEEECCCCCCEEEEEEECCCCEEEETTSCEEECCEEEEE
T ss_pred eEEEEcCCceEEEcccccccCEEEEEEEEcCCCceeccceeEEEecCCCcccCceEecCCCceEecCCCcEEEEEEcCCC
Confidence 4444443 78999999999999999999987655 3345677776543 233455667788999999999999 8
Q ss_pred CCCCCcEEEEeecCcccCCCcc------eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCcCcc
Q psy11131 81 YDSGPYLIAWFKDGRQIPGRTS------STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGTRNI 145 (150)
Q Consensus 81 p~~~~~~~~w~~~~~~~~~~~~------~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p~~ 145 (150)
| .+.+.|++++..+..... ...|.|.++..+|.|.|.|.+.|..| ..+..+.+.|..+|..
T Consensus 249 p---~~~~~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g-~~~~~~~l~V~~~p~~ 315 (403)
T 3laf_A 249 P---PPSFTWLRGEEVIQLRSKKYSLLGGSNLLISNVTDDDSGTYTCVVTYKNE-NISASAELTVLVPPWF 315 (403)
T ss_dssp S---CCEEEEEETTEECCCSSSSEEEETTTEEEECSCCGGGCEEEEEEEEETTE-EEEEEEEEEEEEEEEE
T ss_pred C---CCeEEEEECCeeccCCCceEEECCccEEEEeCCCHHHCEEEEEEEEcCCC-ceEEEEEEEEECCCcE
Confidence 8 889999999887654332 35799999999999999999999988 5778888888766543
No 84
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.78 E-value=3.1e-17 Score=110.96 Aligned_cols=125 Identities=21% Similarity=0.303 Sum_probs=92.5
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeE---EEEEEEe-------cCceE-EeCCCcEEEecCCcEEEEEEec-CCCCC
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATA---EVRLQVS-------TPYRV-DVNPPLLSVHLDGSANFQCEIT-PYDSG 84 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~---~~~l~v~-------~~~~~-~~~~~~~~~~~g~~~~l~C~~~-~p~~~ 84 (150)
+.|.|.++..+|+|.|+|.+.|..+.... ...+.+. ..|.+ ...+....+.+|+.+.|.|.+. .|
T Consensus 157 ~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~P--- 233 (384)
T 3kld_A 157 GNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNP--- 233 (384)
T ss_dssp CCEEESSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEEEEEECCCEEEEEEEECCSEEEEETTSCEEEEEEEEEES---
T ss_pred CcEEEeecCHHHCceEEEEEecccccceeeCCceEEEEccCCcccccCCceeecCCCceEecCCCcEEEEEEEeecC---
Confidence 78999999999999999999987654321 1223222 12222 2345566788999999999999 99
Q ss_pred CcEEEEeecC-cccCCCcc----eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCcCcc
Q psy11131 85 PYLIAWFKDG-RQIPGRTS----STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGTRNI 145 (150)
Q Consensus 85 ~~~~~w~~~~-~~~~~~~~----~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p~~ 145 (150)
.|.+.|++++ ..+..... ...|.|.++..+|.|.|.|.+.|..| .......|.|..+|..
T Consensus 234 ~p~i~W~k~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G-~~~~~~~l~v~~~P~~ 298 (384)
T 3kld_A 234 VPTILWRRADGKPIARKARRHKSNGILEIPNFQQEDAGSYECVAENSRG-KNVAKGQLTFYAQPNW 298 (384)
T ss_dssp CCEEEEEETTCCCCCTTCEECTTSCEEEECSCCGGGCEEEEEEEEETTE-EEEEEEEEEEEEEEEE
T ss_pred CCcEEEEeCCCccccccceecCCCcEEEECCCChhhCEEEEEEEEcCCC-eEEEEEEEEEecCCcc
Confidence 9999999854 33332211 46799999999999999999999998 5667777777766543
No 85
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.78 E-value=4e-18 Score=113.31 Aligned_cols=131 Identities=23% Similarity=0.297 Sum_probs=102.7
Q ss_pred CCceEEeCCeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCceEE--eCCCcEEEecCCcEEEEEE-----ec-C
Q psy11131 9 GPRTRVLGPILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVD--VNPPLLSVHLDGSANFQCE-----IT-P 80 (150)
Q Consensus 9 ~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~--~~~~~~~~~~g~~~~l~C~-----~~-~ 80 (150)
..++...+++|.|.+++.+|+|.|+|.+.+..+.....+.|.|..++... .......+.+|+.+.|.|. .. .
T Consensus 73 ~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~ 152 (339)
T 3o4o_C 73 ETRMWAQDGALWLLPALQEDSGTYVCTTRNASYCDKMSIELRVFENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDK 152 (339)
T ss_dssp SSCEEEETTEEEESSBCTTCCEEEECCEEETTEEEEEEEEEEEECSCGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSS
T ss_pred cccEEeeCCeEEECCCCcccCEEEEEEEECCcceEEEEEEEEEEcCCCccccccccceEEECCCCEEEEecCCcccccCC
Confidence 45666667899999999999999999999988888888889988654321 1122346789999999999 56 7
Q ss_pred CCCCCcEEEEeecCcccCCCcc-------eeeEEEccCCCCCCceEEEEEEeCCCC---ceeeeEEEEEcCc
Q psy11131 81 YDSGPYLIAWFKDGRQIPGRTS-------STSLVINPVGREDRGIYQCIARRSDGD---VAQGSAELQLGGT 142 (150)
Q Consensus 81 p~~~~~~~~w~~~~~~~~~~~~-------~~~l~~~~~~~~~~g~y~C~~~~~~g~---~~~~~~~l~v~~~ 142 (150)
| .+.+.|++++..+..... ...|.|.++...|.|.|.|.+.|..|. .....+.|.|...
T Consensus 153 p---~~~v~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~ 221 (339)
T 3o4o_C 153 T---DVKIQWYKDSLLLDKDNEKFLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKK 221 (339)
T ss_dssp S---CCCBCCEESSCBCCTTCSSEEECTTSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEECC
T ss_pred C---CceEEEecCCeeCCCCCceeEEcCCcceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcC
Confidence 7 889999999887764422 247999999999999999999998763 2456677777643
No 86
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.78 E-value=1.6e-17 Score=117.54 Aligned_cols=125 Identities=22% Similarity=0.297 Sum_probs=102.0
Q ss_pred eEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcc
Q psy11131 18 ILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQ 96 (150)
Q Consensus 18 ~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~ 96 (150)
.|.|.+++.+|+|.|+|.+.+..+..+..+.|.|..+|.+...+....+.+|+.+.|.|.+. .+. .+.+.|++++..
T Consensus 76 ~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~V~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~--~~~v~W~k~~~~ 153 (585)
T 2ocw_A 76 VVNIAQLSQDDSGRYKCGLGINSRGLSFDVSLEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENA--QKRKSLYKQIGL 153 (585)
T ss_pred EEEECCCCcccCEEEEEEcccCCCCceEEEEEEEecCccccCCCccEEEEcCCCEEEEEEecCCCC--CccEEEEECCCC
Confidence 69999999999999999999887777888999999888877777778899999999999998 431 578999998653
Q ss_pred cCC-------------Ccc-----------eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCcCcc
Q psy11131 97 IPG-------------RTS-----------STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGTRNI 145 (150)
Q Consensus 97 ~~~-------------~~~-----------~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p~~ 145 (150)
... ..+ ...|.|.++..+|.|.|.|.+.|..| .....+.|.|..+|+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g-~~~~~~~l~V~~~~p~ 225 (585)
T 2ocw_A 154 YPVLVIDSSGYVNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSN-SNKKNADLQVLKPEPE 225 (585)
T ss_pred CceEEecCCcccCccccCcEEEEeccCCCcEEEEEEccCChhHCeEEEEEeccCCc-cccceEEEEEccCCCc
Confidence 210 011 12799999999999999999999888 5778888888876554
No 87
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.77 E-value=2.4e-18 Score=108.05 Aligned_cols=122 Identities=20% Similarity=0.303 Sum_probs=87.4
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecC---ceEEeCCCcEEEecCCcEEEEEEe-c-CCCCCCcEEEEe
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTP---YRVDVNPPLLSVHLDGSANFQCEI-T-PYDSGPYLIAWF 91 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~---~~~~~~~~~~~~~~g~~~~l~C~~-~-~p~~~~~~~~w~ 91 (150)
.+|.|.+++.+|+|.|+|.+.+. +..+..+.|.|..+ |.+...+ ...+.+|+.+.|.|.+ . .| .+.+.|+
T Consensus 72 ~sL~I~~v~~~D~G~Y~C~~~~~-~~~~~~~~l~V~~~~~~p~i~~~~-~~~v~~G~~~~l~C~~~~g~P---~~~v~W~ 146 (222)
T 4i0k_A 72 ASLRLQRVRVTDEGSYTCFVSIQ-DFDSAAVSLQVAAPYSKPSMTLEP-NKDLRPGNMVTITCSSYQGYP---EAEVFWK 146 (222)
T ss_dssp CCEEECSCCGGGCSCEEEEEEEC-CCCCCCCCCCCCBCCCCCEEECCC------CCSEEEEEEEEEEEBS---CCEEEEE
T ss_pred EEEEECCcccccCEEEEEEEEeC-CCceEEEEEEEEcCCCCCcEEeCC-CceecCCceEEEEEecccccC---CCeEEEE
Confidence 67999999999999999999875 34445556666643 3444333 3356789999999999 5 88 8999999
Q ss_pred ec-CcccCCCcc----------eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCcCc
Q psy11131 92 KD-GRQIPGRTS----------STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGTRN 144 (150)
Q Consensus 92 ~~-~~~~~~~~~----------~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p~ 144 (150)
++ +..+..... ...+.+.++..+|.|.|.|.+.|..| ....++.+.|.++|-
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g-~~~~~~~l~V~~~p~ 209 (222)
T 4i0k_A 147 DGQGVPLTGNVTTSQMANERGLFDVHSVLRVVLGANGTYSCLVRNPVL-QQDAHGSVTITGQPL 209 (222)
T ss_dssp CTTSCBCCSEEEEEEEECTTSCEEEEEEEEEECCTTCEEEEEEEETTT-TEEEEEEEECCC---
T ss_pred cCCCccCCCCcceeEEcCCCCeEEEEEEEEEEeCCCCEEEEEEECCCC-CCceEEEEEEeCCcc
Confidence 84 443322111 23478888999999999999999999 678888998887653
No 88
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.77 E-value=1.6e-17 Score=121.56 Aligned_cols=126 Identities=35% Similarity=0.624 Sum_probs=107.4
Q ss_pred CCceEEeCCeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcE
Q psy11131 9 GPRTRVLGPILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYL 87 (150)
Q Consensus 9 ~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~ 87 (150)
+.++....++|.|.+++.+|+|.|+|.+.|..|..+....|.|..++.....+....+.+|+.+.|.|.+. .| .+.
T Consensus 298 ~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~~~~v~~G~~v~l~C~~~g~p---~~~ 374 (816)
T 3dmk_A 298 NDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYTGNP---IKT 374 (816)
T ss_dssp SSSEEEETTEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECEEEEEEEESSEEECCTTSCEEEEEEEEEEC---CCE
T ss_pred CCceEeccceEEECCCCHhHCEEEEEEEEcCCCceEEEEEEEEcCCCceeeCCCceEecCCCCEEEEEEEeccC---CCE
Confidence 34555556899999999999999999999998888888889998877777777777888999999999999 88 899
Q ss_pred EEEeecCcccCCCcceeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEc
Q psy11131 88 IAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLG 140 (150)
Q Consensus 88 ~~w~~~~~~~~~~~~~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~ 140 (150)
+.|++++..+... ...|.|.++..+|.|.|.|.+.|..| .....+.+.|.
T Consensus 375 v~W~k~g~~~~~~--~~~L~i~~v~~~d~G~Y~C~a~n~~g-~~~~~~~l~v~ 424 (816)
T 3dmk_A 375 VSWMKDGKAIGHS--ESVLRIESVKKEDKGMYQCFVRNDRE-SAEASAELKLG 424 (816)
T ss_dssp EEEEETTEECSCC--SSEEEESSCCGGGCEEEEEEEECSSC-EEEECCEEECC
T ss_pred EEEEECCEECCCC--CCEEEEcCCCHHHCEEEEEEEECCCC-cEEEEEEEEEc
Confidence 9999999887644 46899999999999999999999888 55666666664
No 89
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.77 E-value=1e-17 Score=106.99 Aligned_cols=121 Identities=20% Similarity=0.331 Sum_probs=83.7
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCceEEeCCCcEEEecCCcEEEEEEec--CCCCCCc-EEEEeec
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCEIT--PYDSGPY-LIAWFKD 93 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~--~p~~~~~-~~~w~~~ 93 (150)
.+|.|.+++.+|+|.|+|.+.+..+.....+.|.|..+|.+...+.. ....|..+.|.|.+. .| .+ .+.|+++
T Consensus 82 ~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~~P~v~~~~~~-~~~~~~~~~L~C~~~g~~P---~pi~v~W~k~ 157 (248)
T 3pv7_A 82 ASLRLPGIQLEEAGEYRCEVVVTPLKAQGTVQLEVVASPASRLLLDQ-VGMKENEDKYMCESSGFYP---EAINITWEKQ 157 (248)
T ss_dssp CCEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCEEEEECC---------CEEEEEEEEEBS---SCCEEEEEEE
T ss_pred EEEEeCCCCHHHCeEEEEEEEeCCccceeEEEEEEecCCceEEecCC-ccccCCCcEEEEEEccEEC---CCeEEEEEEC
Confidence 45999999999999999999988777778889999988776655442 234566778999998 57 77 9999998
Q ss_pred CcccCCC----------------cc----eeeEEEccCCCCCCceEEEEEEeCCCC-ceeeeEEEEEcC
Q psy11131 94 GRQIPGR----------------TS----STSLVINPVGREDRGIYQCIARRSDGD-VAQGSAELQLGG 141 (150)
Q Consensus 94 ~~~~~~~----------------~~----~~~l~~~~~~~~~~g~y~C~~~~~~g~-~~~~~~~l~v~~ 141 (150)
+..+... .. ...|.+.....+|.|.|+|.+.|..+. .....+.|.|..
T Consensus 158 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n~~~~~~~~~~v~l~V~~ 226 (248)
T 3pv7_A 158 TQKFPHPIEISEDVITGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRHASLHTPLRSNFTLTAAR 226 (248)
T ss_dssp CSSSCSCEEECTTEEEEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEECTTCSSCEEEEECC----
T ss_pred CccCCCccccccceeecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEECCCCCCCcEEEEEEEEcC
Confidence 8643211 00 356777788888899999999998773 345566666633
No 90
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.77 E-value=3.9e-17 Score=100.02 Aligned_cols=118 Identities=14% Similarity=0.231 Sum_probs=84.1
Q ss_pred CCCceEEeC-CeEEEcCCCCCCCeEEEEEeccCCcce--eEEEEEEEecCceEEeCCCcEEEecCCcEEEEEEec-CCCC
Q psy11131 8 PGPRTRVLG-PILAIEGVTAEDSGTYRCSSSNIGGEA--TAEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCEIT-PYDS 83 (150)
Q Consensus 8 ~~~~~~~~~-~~l~i~~~~~~d~G~Y~C~~~~~~~~~--~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~ 83 (150)
.+.|+.+.. ++|.|.+++++|+|.|+|.+.+..|.. ...+.|.|.++. ..+.... .+..+.|.|.+. .|
T Consensus 56 ~~~R~~~~~ngsL~I~~v~~~DsG~Y~c~~~n~~g~~~~~~~~~L~V~~~~----~~P~i~~-~~~~v~L~C~~~~~p-- 128 (182)
T 1hnf_A 56 EKDTYKLFKNGTLKIKHLKTDDQDIYKVSIYDTKGKNVLEKIFDLKIQERV----SKPKISW-TCINTTLTCEVMNGT-- 128 (182)
T ss_dssp SCTTEEECTTSCEEECSCCGGGCEEEEEEEEETTSCEEEEEEEEEEEECCC----CCCEEEE-ETTTTEEEEECSSCS--
T ss_pred CCCeEEECCCCCEEECCCChhhCEEEEEEEEeCCCceeEEEEEEEEEcCcC----CCCEEEE-ccCcEEEEeEccCCC--
Confidence 457777766 899999999999999999999876664 345678887531 1111222 234789999999 88
Q ss_pred CCcEEEEeecCcccCCCcceeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEE
Q psy11131 84 GPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAEL 137 (150)
Q Consensus 84 ~~~~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l 137 (150)
.+.+.|++++..+ ......+.+.. ...|.|.|.|.|.|..+ ..+....+
T Consensus 129 -~~~~~W~~~g~~l--~~~~~~i~~~~-~~~d~G~Y~C~a~N~~~-~~~s~~~~ 177 (182)
T 1hnf_A 129 -DPELNLYQDGKHL--KLSQRVITHKW-TTSLSAKFKCTAGNKVS-KESSVEPV 177 (182)
T ss_dssp -SCEEEEEESSCEE--EEESSCEEEEC-CSCEEEEEEEEEECSSC-EEEEEEEE
T ss_pred -CCEEEEEECCEEC--CCCCcEEEEec-ccCCCcEEEEEEEeCCC-CcEEccee
Confidence 8999999998877 11123344333 46889999999999998 34444433
No 91
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.77 E-value=2.2e-17 Score=106.13 Aligned_cols=133 Identities=20% Similarity=0.346 Sum_probs=95.1
Q ss_pred CCceEEeC------CeEEEcCCCCCCCeEEEEEeccCCcc-----eeEEEEEEEecCceEEeCCCcEEEecCCcEEEEEE
Q psy11131 9 GPRTRVLG------PILAIEGVTAEDSGTYRCSSSNIGGE-----ATAEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCE 77 (150)
Q Consensus 9 ~~~~~~~~------~~l~i~~~~~~d~G~Y~C~~~~~~~~-----~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~ 77 (150)
+.|+.+.. .+|.|.+++.+|+|.|.|.+.+..+. ....+.|.|..++.+...+....+.+|+.+.|.|.
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~v~~~p~~~~v~~G~~v~L~C~ 144 (256)
T 1nqb_A 65 KSKATLTVDKPSSTAYMQLSSLTSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVSSDIELTQTPLSLPVSLGDQASISCR 144 (256)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECCTTSSSSCSEECCCEEEEECCCCCEEEECSEEEECTTCCEEEEEE
T ss_pred CCeEEEEEecCCCEEEEEECcCChhhCEEEEEEEeeccCccceeEEcCceeeeecccccEEecCcEEEEecCCcEEEEeE
Confidence 36776652 47999999999999999999987542 22346788887766666667778899999999999
Q ss_pred ec-CCCCCCc-----EEEEee--cCcccC------------CCcc--------eeeEEEccCCCCCCceEEEEEEeCCCC
Q psy11131 78 IT-PYDSGPY-----LIAWFK--DGRQIP------------GRTS--------STSLVINPVGREDRGIYQCIARRSDGD 129 (150)
Q Consensus 78 ~~-~p~~~~~-----~~~w~~--~~~~~~------------~~~~--------~~~l~~~~~~~~~~g~y~C~~~~~~g~ 129 (150)
+. .| .+ .+.|++ ++..+. ...+ ...|.|.++..+|.|.|.|.+.+....
T Consensus 145 ~~~~~---~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~ 221 (256)
T 1nqb_A 145 SSQSI---VHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPY 221 (256)
T ss_dssp ESSCC---BCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSC
T ss_pred ecCcc---cccccceEEEEEEECCCCCcEEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChHHCEEEEEEEccCCce
Confidence 98 66 54 999998 444321 0011 347999999999999999999875432
Q ss_pred ceeeeEEEEEcCcCc
Q psy11131 130 VAQGSAELQLGGTRN 144 (150)
Q Consensus 130 ~~~~~~~l~v~~~p~ 144 (150)
....-..|.|..+++
T Consensus 222 ~fg~gt~l~V~~~~~ 236 (256)
T 1nqb_A 222 TFGGGTKLEIKRAAA 236 (256)
T ss_dssp EECCCEEEEECC---
T ss_pred EECCCEEEEEECCCC
Confidence 233445677766554
No 92
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.77 E-value=3.4e-18 Score=105.75 Aligned_cols=108 Identities=18% Similarity=0.232 Sum_probs=73.4
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcc--eeEEEEEEEec---CceEEeCCCcEEEecCCcEEEEEEecCCCCCCcEEEEe
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGE--ATAEVRLQVST---PYRVDVNPPLLSVHLDGSANFQCEITPYDSGPYLIAWF 91 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~--~~~~~~l~v~~---~~~~~~~~~~~~~~~g~~~~l~C~~~~p~~~~~~~~w~ 91 (150)
+.|.|.+++.+|+|.|+|.+.+..+. .+..+.|.|.. +|.+...+ ...+.+|+.+.|.|.+... ++.+.|+
T Consensus 58 ~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~V~~~~~~p~i~~~~-~~~v~~G~~v~L~C~~~~~---p~~~~W~ 133 (196)
T 2d3v_A 58 ARFSIPSMTEHHAGRYRCYYYSPAGWSEPSDPLELVVTGFYNKPTLSALP-SPVVTSGENVTLQCGSRLR---FDRFILT 133 (196)
T ss_dssp EEEEESSCCGGGCEEEEEEEEETTEECBCCCCEEEEEECSSCCCEEEC------------CEEEEEESSC---CSEEEEE
T ss_pred cEEEeccCChhHCeEEEEEEeCCCCcCCcCccEEEEecCCCCCCeEEccC-CccccCCCcEEEEEEcCCC---CCEEEEE
Confidence 67999999999999999999887653 24557788876 34444333 3467899999999999833 4689999
Q ss_pred ecCcccCCC----------cceeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 92 KDGRQIPGR----------TSSTSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 92 ~~~~~~~~~----------~~~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
+++..+... .....|.|.++..+|.|.|.|.+.|..+
T Consensus 134 k~g~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~ 180 (196)
T 2d3v_A 134 EEGDHKLSWTLDSQLTPSGQFQALFPVGPVTPSHRWMLRCYGSRRHI 180 (196)
T ss_dssp EC---CCEEEEECEECTTSCEEEEEECCCCBTTBCEEEEEEEEETTE
T ss_pred ccCCcccccccccccccCCCceeEEEeeecCcccCeeEEEEEEccCC
Confidence 998765321 0137899999999999999999998653
No 93
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.77 E-value=4.2e-17 Score=100.73 Aligned_cols=116 Identities=17% Similarity=0.223 Sum_probs=83.3
Q ss_pred CceEEeC-CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCc---eEEeCCCcEEEecCC-cEEEEEEec--CCC
Q psy11131 10 PRTRVLG-PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPY---RVDVNPPLLSVHLDG-SANFQCEIT--PYD 82 (150)
Q Consensus 10 ~~~~~~~-~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~---~~~~~~~~~~~~~g~-~~~l~C~~~--~p~ 82 (150)
.|+.+.. ++|.|.+++.+|+|.|.|.+.+..+.....+.|.|..++ .+...+. ....|. .+.|.|.+. .|
T Consensus 62 ~R~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~~~~~p~i~~~~~--~~~~g~~~v~L~C~~~g~~p- 138 (193)
T 2if7_A 62 KRLNFTQSYSLQLSNLKMEDTGSYRAQISTKTSAKLSSYTLRILRQLRNIQVTNHSQ--LFQNMTCELHLTCSVEDADD- 138 (193)
T ss_dssp TTEEECTTCCEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCEEEEEEECCC-----CSSEEEEEEEEEESCCT-
T ss_pred ccEEECCCeEEEECCCCcccCceEEEEEEecCCCeEEEEEEEEEccCCCCeEecCce--eecCCCceEEEEEEEecCCC-
Confidence 3555554 789999999999999999999887766667888887653 2222221 123454 799999998 35
Q ss_pred CCCcEEEEeecCcccCCCcceeeEEEccCCCC-CCceEEEEEEeCCCCceeee
Q psy11131 83 SGPYLIAWFKDGRQIPGRTSSTSLVINPVGRE-DRGIYQCIARRSDGDVAQGS 134 (150)
Q Consensus 83 ~~~~~~~w~~~~~~~~~~~~~~~l~~~~~~~~-~~g~y~C~~~~~~g~~~~~~ 134 (150)
.+.+.|++++..+.. ...|.+.....+ |.|.|.|.+.|..| ..+..
T Consensus 139 --~p~i~W~~~g~~l~~---~~~l~i~~~~~~~d~G~Y~C~a~N~~g-~~s~~ 185 (193)
T 2if7_A 139 --NVSFRWEALGNTLSS---QPNLTVSWDPRISSEQDYTCIAENAVS-NLSFS 185 (193)
T ss_dssp --TCEEEEEETTEEEES---SSEEEEEECTTTCSCCEEEEEEEETTE-EEEEE
T ss_pred --ceEEEEEeCCEEcCC---CCeEEEEeccCcCCCCcEEEEEECCCC-ccccc
Confidence 789999998876532 235666554454 89999999999998 34443
No 94
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.77 E-value=5.6e-18 Score=106.85 Aligned_cols=123 Identities=22% Similarity=0.329 Sum_probs=90.1
Q ss_pred EeC-CeEEEcCCCCCCCeEEEEEeccCC-cceeEEEEEEEecCc---eEEeCCCcEEEecCCcE-EEEEEe-c-CCCCCC
Q psy11131 14 VLG-PILAIEGVTAEDSGTYRCSSSNIG-GEATAEVRLQVSTPY---RVDVNPPLLSVHLDGSA-NFQCEI-T-PYDSGP 85 (150)
Q Consensus 14 ~~~-~~l~i~~~~~~d~G~Y~C~~~~~~-~~~~~~~~l~v~~~~---~~~~~~~~~~~~~g~~~-~l~C~~-~-~p~~~~ 85 (150)
+.. +.|.|.+++.+|+|.|+|.+.+.. +.....+.|.|..+| .+...+....+.+|+.+ .|.|.+ . .| .
T Consensus 73 ~~~~~~L~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p---~ 149 (231)
T 2pet_A 73 LDSQGRLVLAEAQVGDERDYVCVVRAGAAGTAEATARLNVFAKPEATEVSPNKGTLSVMEDSAQEIATCNSRNGNP---A 149 (231)
T ss_dssp ECTTCCEEESSCCGGGCEEEEEEEECGGGCEEEEEEEEEEEBCCCCCEEEECCSSCCTTCCSEEEEEEEEEEEEBS---C
T ss_pred cCCCceEEEcccCcccCceEEEEEEecCCCceEEEEEEEEEecCCCcEEecCCcceeecCCCceEEEEEEeECccc---C
Confidence 444 679999999999999999999875 667788888888653 33444444445678877 999999 6 88 8
Q ss_pred cEEEEeecCcccCCCc----c-----------------eeeEEEccCCCCCCceEEEEEEeC-----CCCceeeeEEEEE
Q psy11131 86 YLIAWFKDGRQIPGRT----S-----------------STSLVINPVGREDRGIYQCIARRS-----DGDVAQGSAELQL 139 (150)
Q Consensus 86 ~~~~w~~~~~~~~~~~----~-----------------~~~l~~~~~~~~~~g~y~C~~~~~-----~g~~~~~~~~l~v 139 (150)
+.+.|++++..+.... . ...|.+.....+|.|.|.|.+.|. .|...+..+.|.|
T Consensus 150 p~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~n~~~~~~~~~~~s~~~~l~V 229 (231)
T 2pet_A 150 PKITWYRNGQRLEVPVEMNPEGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHYSLPEGRHGRLDSPTFHLTL 229 (231)
T ss_dssp CEEEEEETTEECCCCSSCCSSEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEEEECGGGCEEEEECCCEECCC
T ss_pred CEEEEEECCccCccccccccceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEEcCCcccccccccccceEEEE
Confidence 9999999988765443 1 145777755556699999999994 3321445555544
No 95
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.76 E-value=8.4e-18 Score=107.34 Aligned_cols=123 Identities=18% Similarity=0.284 Sum_probs=91.8
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcc--eeEEEEEEEec---CceEEeCCCcEEEecCCcEEEEEEecCCCCCCcEEEEe
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGE--ATAEVRLQVST---PYRVDVNPPLLSVHLDGSANFQCEITPYDSGPYLIAWF 91 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~--~~~~~~l~v~~---~~~~~~~~~~~~~~~g~~~~l~C~~~~p~~~~~~~~w~ 91 (150)
+.|.|.+++.+|+|.|+|.+.+..+. .+..+.|.|.+ +|.+...+. ..+.+|+.+.|.|.+..+ .+.+.|+
T Consensus 60 ~~L~I~~v~~~DsG~Y~C~~~~~~~~s~~S~~~~L~V~~~~~~P~i~~~p~-~~v~~G~~vtL~C~~~~~---~~~~~w~ 135 (242)
T 1p6f_A 60 VKFYIPDMNSRMAGQYSCIYRVGELWSEPSNLLDLVVTEMYDTPTLSVHPG-PEVISGEKVTFYCRLDTA---TSMFLLL 135 (242)
T ss_dssp EEEEECSCCGGGCEEEEEEEEETTEECCCCCCEEEEEECCSCCCEEEEESC-SEEETTCEEEEEEECTTS---CSEEEEE
T ss_pred eEEEecCCCcccCeEEEEEEecCCccccCCcceEEEeecccCCCceEccCC-CccCCCCcEEEEEecCCC---CCEEEEE
Confidence 67999999999999999999775432 34567777764 445544332 357899999999998744 5699999
Q ss_pred ecCcccCC----CcceeeEEEccCCCCCCceEEEEEEeCC--CCceeeeEEEEEcCcC
Q psy11131 92 KDGRQIPG----RTSSTSLVINPVGREDRGIYQCIARRSD--GDVAQGSAELQLGGTR 143 (150)
Q Consensus 92 ~~~~~~~~----~~~~~~l~~~~~~~~~~g~y~C~~~~~~--g~~~~~~~~l~v~~~p 143 (150)
+++..+.. ......|.|.++..+|.|.|.|.+.+.. ....+..+.|.|.+++
T Consensus 136 k~g~~~~~~~~~~~~~~~l~I~~v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~~~~ 193 (242)
T 1p6f_A 136 KEGRSSHVQRGYGKVQAEFPLGPVTTAHRGTYRCFGSYNNHAWSFPSEPVKLLVTGDI 193 (242)
T ss_dssp ECSSSCEEEEEECSSEEEEEEEECCGGGCEEEEEEEEEETTEECCCCCCEEEEEEC--
T ss_pred ECCCccCccccCCCceEEEEeCCCccccCEEEEEEEECCCCcccCCCCCEEEEEeccC
Confidence 99876542 1126789999999999999999998763 2245678888888743
No 96
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.76 E-value=1.1e-18 Score=107.28 Aligned_cols=107 Identities=22% Similarity=0.403 Sum_probs=81.1
Q ss_pred CeEEEcC-CCCCCCeEEEEEeccCCcceeEEEEEEEecCceEE----------------------eCCCcE---EEecCC
Q psy11131 17 PILAIEG-VTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVD----------------------VNPPLL---SVHLDG 70 (150)
Q Consensus 17 ~~l~i~~-~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~----------------------~~~~~~---~~~~g~ 70 (150)
++|.|.+ ++.+|+|.|+|.+.|..|..+....+.|....... ...... .+.+|+
T Consensus 44 ~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 123 (186)
T 1jbj_A 44 KHLVLQDFSEVEDSGYYVCYTPASNKNTYLYLKARVGSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDG 123 (186)
T ss_dssp SEEEEESCCTTTSCEEEEEECSSCCCCCCEEECCCCCSCCCCCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSSC
T ss_pred CEEEECCCCccccCEEEEEEEEeCCCcEEEEEEEEEecccccccccccccccccCCccccccccccccccccceecCCCC
Confidence 6799999 99999999999999987775555555554221100 000011 233899
Q ss_pred cEEEEEEecCCCCCCcEEEEeecCcccCCCcc-eeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 71 SANFQCEITPYDSGPYLIAWFKDGRQIPGRTS-STSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 71 ~~~l~C~~~~p~~~~~~~~w~~~~~~~~~~~~-~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
.+.|.|.+ | .|.+.|++++..+..... ...|.|.++..+|.|.|+|.+.|..|
T Consensus 124 ~v~l~C~~--p---~p~i~W~k~g~~i~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g 177 (186)
T 1jbj_A 124 SVLLTCGL--T---DKTIKWLKDGSIISPLNATKNTWNLGNNAKDPRGTYQCQGAKETS 177 (186)
T ss_dssp EEEEECSS--S---CSCEEEEETTEECCCSSCCSSCCEEEETTSCCEEEEEEEESSCEE
T ss_pred eEEEEeeC--C---CCeEEEEECCEECcccCCCcceEEECCCCcCcCEEEEEEEEcCcC
Confidence 99999998 7 889999999988764332 67899999999999999999999877
No 97
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.76 E-value=2e-18 Score=107.88 Aligned_cols=121 Identities=19% Similarity=0.255 Sum_probs=89.1
Q ss_pred CceEEeC----CeEEEcCCCCCCCeEEEEEeccCCc---ceeEEEEEEEe----cCceEEeCCCcEEEecCCcEEEEEEe
Q psy11131 10 PRTRVLG----PILAIEGVTAEDSGTYRCSSSNIGG---EATAEVRLQVS----TPYRVDVNPPLLSVHLDGSANFQCEI 78 (150)
Q Consensus 10 ~~~~~~~----~~l~i~~~~~~d~G~Y~C~~~~~~~---~~~~~~~l~v~----~~~~~~~~~~~~~~~~g~~~~l~C~~ 78 (150)
.|+.+.. .+|.|.+++.+|+|.|.|.+.+..+ .....+.|.|. .+|.+...+......+|+.+.|.|.+
T Consensus 59 ~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~ 138 (213)
T 3mj8_L 59 DHFSGSNSGNMATLTISKAQAGDEADYYCQSWDGTNSAWVFGSGTKVTVLGQPNAAPSVTLFPPSSEELKTNQATLVCMI 138 (213)
T ss_dssp TTEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTTTEEEEBCCEEEEEECSCCBCCEEEEECCCHHHHTTTEEEEEEEE
T ss_pred CcEEEEecCCEEEEEECCCChhhCEEEEEEeccCCcceeEEcCceEEEEeCCCCCCCeEEccCCCcccccCCcEEEEEEe
Confidence 4555432 5799999999999999999998766 34556788887 45555544433334479999999999
Q ss_pred c-C-CCCCC-cEEEEeecCcccCCCc---------c----eeeEEEccCCCCCCceEEEEEEeCCCCceeee
Q psy11131 79 T-P-YDSGP-YLIAWFKDGRQIPGRT---------S----STSLVINPVGREDRGIYQCIARRSDGDVAQGS 134 (150)
Q Consensus 79 ~-~-p~~~~-~~~~w~~~~~~~~~~~---------~----~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~ 134 (150)
. . | + +.+.|++++..+.... . ...|.|..+..+|.|.|.|.+.|..+ ....+
T Consensus 139 ~g~~p---~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~-~~~~~ 206 (213)
T 3mj8_L 139 NGFYP---ADVAVTWEADGTPITQGVKTTQPSKSDSKYMATSYLTMTADAWKSRNTFICKVTHGGN-TVEKS 206 (213)
T ss_dssp EEEBS---SCCEEEEEETTEEECTTEEECCCEEETTEEEEEEEEEEESHHHHSCSCEEEEEEETTE-EEEEE
T ss_pred eceeC---CCeEEEEEcCCcccCCCcccCCcCccCCcEEEEEEEEEeHHHcCCCCEEEEEEEECCc-cEEee
Confidence 8 4 4 4 4999999988765321 0 34588888888999999999999876 34443
No 98
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.76 E-value=2.2e-17 Score=105.96 Aligned_cols=133 Identities=20% Similarity=0.285 Sum_probs=93.5
Q ss_pred CCceEEeC------CeEEEcCCCCCCCeEEEEEeccC----CcceeEEEEEEEec----------------CceEEeCCC
Q psy11131 9 GPRTRVLG------PILAIEGVTAEDSGTYRCSSSNI----GGEATAEVRLQVST----------------PYRVDVNPP 62 (150)
Q Consensus 9 ~~~~~~~~------~~l~i~~~~~~d~G~Y~C~~~~~----~~~~~~~~~l~v~~----------------~~~~~~~~~ 62 (150)
..|+.+.. .+|.|.+++.+|+|.|.|.+.+. .+.....+.|.|.. ++.+...+.
T Consensus 67 ~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p~ 146 (256)
T 3umt_A 67 KGKAILTVDKSSSTAYLELRSLTSEDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPS 146 (256)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEECS
T ss_pred cceEEEEEecCCCEEEEEECCCCcccCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCCC
Confidence 35666553 34999999999999999999886 22334456788874 445555666
Q ss_pred cEEEecCCcEEEEEEec-CCCCCCcEEEEeecC--cccC------------CCcc--------eeeEEEccCCCCCCceE
Q psy11131 63 LLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDG--RQIP------------GRTS--------STSLVINPVGREDRGIY 119 (150)
Q Consensus 63 ~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~--~~~~------------~~~~--------~~~l~~~~~~~~~~g~y 119 (150)
...+.+|+.+.|.|.+. .+ .+.+.|++.. .... ...+ ...|.|.++..+|+|.|
T Consensus 147 ~~~v~~G~~v~L~C~~~~~~---~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 223 (256)
T 3umt_A 147 SLSASLGERVSITCRASQDI---GSNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDY 223 (256)
T ss_dssp EEEECTTCCEEEEEEESSCC---TTCEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCSEE
T ss_pred eEEEECCCCEEEEEEEecCC---CcEEEEEEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHCEEE
Confidence 67889999999999999 77 7799998742 1111 0011 34599999999999999
Q ss_pred EEEEEeCCCCceeeeEEEEEcCcCc
Q psy11131 120 QCIARRSDGDVAQGSAELQLGGTRN 144 (150)
Q Consensus 120 ~C~~~~~~g~~~~~~~~l~v~~~p~ 144 (150)
.|.+.+........-..|.|..+++
T Consensus 224 ~C~~~~~~~~~fg~gt~L~V~~~~~ 248 (256)
T 3umt_A 224 YCLQYASSPPTFGGGTKLEIKRAAA 248 (256)
T ss_dssp EEEECSSSSCEECCCEEEEEC----
T ss_pred EEEEeeCCCcEECCCEEEEEECCCc
Confidence 9999986543344456777776554
No 99
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.76 E-value=2.5e-17 Score=115.25 Aligned_cols=136 Identities=18% Similarity=0.228 Sum_probs=105.3
Q ss_pred cCCCCceEEeC-CeEEEcCCCCCCCe-EEEEEeccCCcce-eEEEEEEEe----cCceEEeCCCcEEEecCCcEEEEEEe
Q psy11131 6 VLPGPRTRVLG-PILAIEGVTAEDSG-TYRCSSSNIGGEA-TAEVRLQVS----TPYRVDVNPPLLSVHLDGSANFQCEI 78 (150)
Q Consensus 6 ~~~~~~~~~~~-~~l~i~~~~~~d~G-~Y~C~~~~~~~~~-~~~~~l~v~----~~~~~~~~~~~~~~~~g~~~~l~C~~ 78 (150)
+..+.++.+.. +.|.|.+++.+|+| .|+|.+.+..+.. +..+.|.|. .+|.+...+....+.+|+.+.|.|.+
T Consensus 156 l~~~~~~~~~~~~~L~i~~~~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~ 235 (524)
T 2ec8_A 156 LPKDLRFIPDPKAGIMIKSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTI 235 (524)
T ss_dssp CCSSCEEEEETTTEEEEESCCGGGTTCEEEEEEC----CCCCCCEECCEECCCCSCCEEECSCSEEEEETTSCEEEEEEE
T ss_pred cCCCCceeECCCccEEEeccchhhCCceEEEEEEECCceEEEEEEEEEEEeCCCCCCcEEecCCcceEEcCCcEEEEEEE
Confidence 44455666654 78999999999999 9999999876554 446788886 56777777777789999999999999
Q ss_pred c-CCCCCCcE-EEEeecCccc--CCCc-----------ceeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCcC
Q psy11131 79 T-PYDSGPYL-IAWFKDGRQI--PGRT-----------SSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGTR 143 (150)
Q Consensus 79 ~-~p~~~~~~-~~w~~~~~~~--~~~~-----------~~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p 143 (150)
. .| .+. +.|++++..+ .... ....|.|.++..+|.|.|.|.+.|..| .....+.|.|..+|
T Consensus 236 ~g~p---~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g-~~~~~~~l~V~~~p 311 (524)
T 2ec8_A 236 KDVS---SSVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFG-SANVTTTLEVVDKG 311 (524)
T ss_dssp EESS---TTCEEEEEETTCSCCCCEEEEEEECSSSCEEEEEEEEESSCCTTTCEEEEEEEECSSC-EEEEEEEEEEESSC
T ss_pred ecCC---CcEEEEEEeCCCCCccccccccccccCCccceEEEEEECCCCHHHCEEEEEEEEecCC-ceEEEEEEEEeccC
Confidence 9 77 665 9999988763 2111 157899999999999999999999998 56668888888776
Q ss_pred cc
Q psy11131 144 NI 145 (150)
Q Consensus 144 ~~ 145 (150)
.+
T Consensus 312 ~~ 313 (524)
T 2ec8_A 312 FI 313 (524)
T ss_dssp EE
T ss_pred ce
Confidence 54
No 100
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.76 E-value=3e-17 Score=105.20 Aligned_cols=135 Identities=20% Similarity=0.320 Sum_probs=93.5
Q ss_pred CceEEeC------CeEEEcCCCCCCCeEEEEEeccCCcce-eEEEEEEEec---------------CceEEeCCCcEEEe
Q psy11131 10 PRTRVLG------PILAIEGVTAEDSGTYRCSSSNIGGEA-TAEVRLQVST---------------PYRVDVNPPLLSVH 67 (150)
Q Consensus 10 ~~~~~~~------~~l~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~v~~---------------~~~~~~~~~~~~~~ 67 (150)
.|+.+.. .+|.|.+++.+|+|.|+|.+.+..+.. .....|.|.. ++.+...+....+.
T Consensus 67 ~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~ 146 (253)
T 3uzq_A 67 GKATITADTSSNTAYLHLSSLTSGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAVS 146 (253)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEECSEEEEC
T ss_pred CcEEEEeecCCCeEEEEeCCCCcccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcCCeEEEe
Confidence 5666553 249999999999999999999854443 3456777774 34455556667889
Q ss_pred cCCcEEEEEEec-CCCCCCc----EEEEeecC--cccC------------CCcc--------eeeEEEccCCCCCCceEE
Q psy11131 68 LDGSANFQCEIT-PYDSGPY----LIAWFKDG--RQIP------------GRTS--------STSLVINPVGREDRGIYQ 120 (150)
Q Consensus 68 ~g~~~~l~C~~~-~p~~~~~----~~~w~~~~--~~~~------------~~~~--------~~~l~~~~~~~~~~g~y~ 120 (150)
+|+.+.|.|.+. .+ .+ .+.|+++. .... ...+ ...|.|.++..+|+|.|.
T Consensus 147 ~G~~v~L~C~~~~~~---~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~ 223 (253)
T 3uzq_A 147 LGQRATISCRASENV---DRYGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYF 223 (253)
T ss_dssp TTSCEEEEEEESSCC---EETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred CCCCEEEEEEecCcc---ccCCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHCEEEE
Confidence 999999999998 76 65 89999842 2111 0001 346999999999999999
Q ss_pred EEEEeCCCCceeeeEEEEEcCcCcccc
Q psy11131 121 CIARRSDGDVAQGSAELQLGGTRNIKH 147 (150)
Q Consensus 121 C~~~~~~g~~~~~~~~l~v~~~p~~~~ 147 (150)
|.+.|..+.....-..|.|.+.++...
T Consensus 224 C~~~n~~~~~fg~gt~l~v~~~~~~~~ 250 (253)
T 3uzq_A 224 CQRSNEVPWTFGGGTKLEIKRPLEHHH 250 (253)
T ss_dssp EEECSSSSCCBCCCEEEEECCC-----
T ss_pred EEEccCCCcEECCCEEEEEcCCCCCcc
Confidence 999986543344455677777665543
No 101
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.76 E-value=2.5e-17 Score=107.28 Aligned_cols=118 Identities=24% Similarity=0.308 Sum_probs=94.3
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCceEEeCCCcEEEecCCcEEEEEEecCCCCCC-cEEEEe-ecC
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCEITPYDSGP-YLIAWF-KDG 94 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~~p~~~~-~~~~w~-~~~ 94 (150)
+.|.|.+++.+|+|.|+|.+.+ |. ...+.|.|..++.....+....+.+|+.+.|.|.+..| . +.+.|+ +++
T Consensus 57 ~~L~i~~~~~~d~G~Y~C~~~n--g~-~~~~~l~V~~~~~~~~~~~~~~~~~g~~v~l~C~~~~p---~~~~v~W~~~~g 130 (290)
T 2o26_X 57 NEWIQEKAEATRTGTYTCSNSN--GL-TSSIYVFVRDPAKLFLVGLPLFGKEDSDALVRCPLTDP---QVSQYSLIECDG 130 (290)
T ss_dssp SEEEETTCCGGGCEEEEEEESS--SC-EEEEEEEEECSSCCBCCCCCEEEETTSCEEECCCBSCC---SCEEEEEEETTS
T ss_pred ceEEEeccCHHhCeEEEEEeeC--Cc-cEEEEEEEeCCCcccccccceEEecCCeEEEeCcCCCC---CCceEEEEeCCC
Confidence 7899999999999999999999 43 77788888876655555666788899999999998866 6 999995 677
Q ss_pred cccCCCcc-----eeeEEEccCCCCCCc-eEEEEEEeCCCCceeeeEEEEEc
Q psy11131 95 RQIPGRTS-----STSLVINPVGREDRG-IYQCIARRSDGDVAQGSAELQLG 140 (150)
Q Consensus 95 ~~~~~~~~-----~~~l~~~~~~~~~~g-~y~C~~~~~~g~~~~~~~~l~v~ 140 (150)
..+..... ...|.|.++..+|.| .|.|.+.|..+...+..+.+.|.
T Consensus 131 ~~l~~~~~~~~~~~~~L~i~~v~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~ 182 (290)
T 2o26_X 131 KSLPTDLTFVPNPKAGITIKNVKRAYHRLCVRCAAQRDGTWLHSDKFTLKVR 182 (290)
T ss_dssp CCCCTTCEEEEETTTEEEEESCCGGGTTCEEEEEEEETTEEEECCCEEEEEE
T ss_pred cCCCCCCceeeCCCCCEEEecccHHHCCCEEEEEEEECCceEEeEEEEEEEE
Confidence 66654322 357999999999999 99999999865333445777765
No 102
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.76 E-value=8.2e-17 Score=98.35 Aligned_cols=116 Identities=19% Similarity=0.323 Sum_probs=89.7
Q ss_pred eEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEee---c
Q psy11131 18 ILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFK---D 93 (150)
Q Consensus 18 ~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~---~ 93 (150)
.|.|. +.+|+|.|+|.+.+. ......|.|..+|.+...+....+.+|+.+.|.|.+. .|. .+.+.|++ +
T Consensus 52 ~l~i~--~~~d~G~Y~C~~~n~---~~~~~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~--~~~i~W~~~~~~ 124 (184)
T 3b5h_A 52 EFKVD--SDDQWGEYSCVFLPE---PMGTANIQLHGPPRVKAVKSSEHINEGETAMLVCKSESVPP--VTDWAWYKITDS 124 (184)
T ss_dssp EEEEC--GGGCCEEEEEEEEST---TSCEEEEEECCSCCCEESCSEEEECTTSCEEEEEECCCSSC--CCEEEEEECCSS
T ss_pred EEEEe--chhhCeEEEEEEECC---cCcEEEEEEecCCceeecCCCcEEcCCCcEEEEEEECCCCC--CCeEEEEEcCCC
Confidence 45555 689999999999973 3456788888888877777777889999999999998 551 48999999 4
Q ss_pred Ccc-cCCCc--c--------eeeEEEccCC-CCCCceEEEEEEeCCCCceeeeEEEEEcC
Q psy11131 94 GRQ-IPGRT--S--------STSLVINPVG-REDRGIYQCIARRSDGDVAQGSAELQLGG 141 (150)
Q Consensus 94 ~~~-~~~~~--~--------~~~l~~~~~~-~~~~g~y~C~~~~~~g~~~~~~~~l~v~~ 141 (150)
+.. +.... + ...|.|.++. ..|.|.|.|.+.|..| .....+.|.|.+
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~N~~g-~~~~~~~l~V~~ 183 (184)
T 3b5h_A 125 EDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTSSKG-SDQAIITLRVRS 183 (184)
T ss_dssp SCEECCTTGGGTEEEEEETTEEEEEECSCCTTTSSEEEEEEEEETTE-EEEEEEEEEEC-
T ss_pred CCEEeecCCCCEEEEEecCCeeEEEEeeccccccCceEEEEEEeCCC-cceEEEEEEEec
Confidence 433 32211 1 2489999999 8999999999999999 567778887753
No 103
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.76 E-value=4.6e-17 Score=101.65 Aligned_cols=124 Identities=17% Similarity=0.304 Sum_probs=86.5
Q ss_pred CCceEEeC------CeEEEcCCCCCCCeEEEEEeccCCcce----eEEEEEEEecC---ceEEeCCCcEEEecCCcEEEE
Q psy11131 9 GPRTRVLG------PILAIEGVTAEDSGTYRCSSSNIGGEA----TAEVRLQVSTP---YRVDVNPPLLSVHLDGSANFQ 75 (150)
Q Consensus 9 ~~~~~~~~------~~l~i~~~~~~d~G~Y~C~~~~~~~~~----~~~~~l~v~~~---~~~~~~~~~~~~~~g~~~~l~ 75 (150)
..|+.+.. .+|.|.+++.+|+|.|.|.+.+..+.. ...+.|.|.+. |.+.. +. .+.+|+.+.|.
T Consensus 68 ~~r~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~~-~~--~~~~G~~v~L~ 144 (214)
T 2zg1_A 68 QGRFRLLGDVQKKNCSLSIGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHF-LE--PLESGRPTRLS 144 (214)
T ss_dssp TTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCCCCCEEC---C--CCCTTCCEEEE
T ss_pred cCceEEeccCCCCeEEEEEccCCHhhCceEEEEEEcCCCceeeecCCceEEEEecCCCCCceec-Cc--cccCCCeEEEE
Confidence 35676643 379999999999999999998764221 24677888763 33322 22 25689999999
Q ss_pred EEec-C----CCCCCcEEEEeecCcccCCCc--ceeeEEEccCCCCCCceEEEEEEeCCCC-ceeeeEEEE
Q psy11131 76 CEIT-P----YDSGPYLIAWFKDGRQIPGRT--SSTSLVINPVGREDRGIYQCIARRSDGD-VAQGSAELQ 138 (150)
Q Consensus 76 C~~~-~----p~~~~~~~~w~~~~~~~~~~~--~~~~l~~~~~~~~~~g~y~C~~~~~~g~-~~~~~~~l~ 138 (150)
|.+. . | .|.+.|++++....... ....|.|..+..+|.|.|+|.+.|..+. ..+.++.|.
T Consensus 145 C~~~~~~~~~p---~p~v~W~~~~~~~~~~~~~~~~~L~i~~~~~~~~g~Y~C~a~n~~~~~~~~~~v~l~ 212 (214)
T 2zg1_A 145 CSLPGSCEAGP---PLTFSWTGNALSPLDPETTRSSELTLTPRPEDHGTNLTCQMKRQGAQVTTERTVQLN 212 (214)
T ss_dssp EECTTCCSCSS---CCEEEEESSTTSSSCSSCCCSSEEEECCCTTCCSCEEEEEEECC----CCEEEEECC
T ss_pred EEeccCCCCCC---CceEEEeCCCCccCCCCceeEEEEEEecccHHcCcEEEEEEEeCCCCcceEEEEEEE
Confidence 9997 4 6 88999999876532211 1578999999889999999999997541 234444443
No 104
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.75 E-value=2.1e-17 Score=102.97 Aligned_cols=120 Identities=15% Similarity=0.203 Sum_probs=87.0
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcc-eeEEEEEEEecCce-EEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeec
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGE-ATAEVRLQVSTPYR-VDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKD 93 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~~l~v~~~~~-~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~ 93 (150)
.+|.|.+++.+|+|.|.|.+.+..+. ......+.+..++. .........+..+..+.+.|.+. .| .|.+.|+++
T Consensus 79 ~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~g~p---~p~i~W~~~ 155 (218)
T 4frw_A 79 GSVLLRNAVQADEGEYECRVSTFPAGSFQARLRLRVLVPPLPSLNPGPALEEGQGLTLAASCTAEGSP---APSVTWDTE 155 (218)
T ss_dssp CCEEESSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCCCEEEECSCEETTCCSEEEEEEEEEEBS---CCEEEEEES
T ss_pred EEEEEeeccHHHCCceeEEEEeccCceeeeEEEEEEeeeccceeeeeeeeeeeeccccceeeeccCCc---CceEEEEEC
Confidence 56999999999999999998875443 33334444443322 22333445566788899999999 88 899999998
Q ss_pred CcccCCCcc---------eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEc
Q psy11131 94 GRQIPGRTS---------STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLG 140 (150)
Q Consensus 94 ~~~~~~~~~---------~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~ 140 (150)
+..+..... .+.|.|..+..+|.|.|+|.|.|..| .....+.+.|.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g-~~~~~~t~~v~ 210 (218)
T 4frw_A 156 VKGTTSSRSFKHSRSAAVTSEFHLVPSRSMNGQPLTCVVSHPGL-LQDQRITHILH 210 (218)
T ss_dssp SCCEEEEEEEECSSSEEEEEEEEECCCGGGTTCEEEEEEECTTC-SSCEEEEEECC
T ss_pred CcccccCceEecCCcEEEEEEEEEeeCCHHhCeEEEEEEEeCCC-CeEEEEEEEEE
Confidence 765532211 45799999999999999999999998 34555555554
No 105
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.75 E-value=2.4e-17 Score=105.73 Aligned_cols=119 Identities=24% Similarity=0.380 Sum_probs=92.8
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEec---CceEEeCCCcEEEecCCcEEEEEEec-CCCCCC-c----E
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVST---PYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGP-Y----L 87 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~---~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~-~----~ 87 (150)
+.|.|.+++.+|+|.|+|.+.+..+..+..+.|.|.. ++.+...+ ...+.+|+.+.|.|.+. .| . + .
T Consensus 131 ~~l~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~p~~~~~~-~~~~~~g~~~~l~C~~~~~p---~~p~~~~~ 206 (262)
T 3rjd_A 131 SNLTILKTNISHNGTYHCSGMGKHRYTSAGISVTVKELFPAPVLNASV-TSPLLEGNLVTLSCETKLLL---QRPGLQLY 206 (262)
T ss_dssp CCEEESSCCGGGCEEEEEEEESSSEEEEECEEEEEECSSCCCEEEESS-CSSEETTCCEEEEEECCCCC---C-----EE
T ss_pred CeEEEEECChhhCEEEEEEEeCCCCccccceEEEeccCCCCCeEeecC-ceeecCCCeEEEEeEcccCC---CCCCccEE
Confidence 6899999999999999999999887777888888885 34444444 44578899999999998 66 3 3 4
Q ss_pred EEEeecCcccCCCcceeeEEEccCCCCCCceEEEEEEeCCCCce--eeeEEEEE
Q psy11131 88 IAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVA--QGSAELQL 139 (150)
Q Consensus 88 ~~w~~~~~~~~~~~~~~~l~~~~~~~~~~g~y~C~~~~~~g~~~--~~~~~l~v 139 (150)
+.|++++..+........|.|..+..+|.|.|.|.+.|..|... +..+.+.|
T Consensus 207 ~~w~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~G~~~~~s~~~~l~V 260 (262)
T 3rjd_A 207 FSFYMGSKTLRGRNTSSEYQILTARREDSGLYWCEAATEDGNVLKRSPELELQV 260 (262)
T ss_dssp EEEEETTEEEEEEESCCEEEESSCCGGGCEEEEEEEEETTSSCEEECCCEEECE
T ss_pred EEEEeCCcEecccCCCceEEEEEechhhCeEEEEEEEcccCceEEecCCeEEEE
Confidence 78888888765433356899999999999999999999998422 33455544
No 106
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.75 E-value=3e-17 Score=106.68 Aligned_cols=122 Identities=20% Similarity=0.306 Sum_probs=92.2
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCce-EEeCCCcEEEecCCcEEEEEEec-CCCCCCc-EEEEee-
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYR-VDVNPPLLSVHLDGSANFQCEIT-PYDSGPY-LIAWFK- 92 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~-~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~-~~~w~~- 92 (150)
..|.|.+++.+|+|.|+|.+.+..+..+..+.|.|..++. +...+....+.+|+.+.|.|.+. .+ .+ .+.|++
T Consensus 51 ~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~L~C~~~~~~---~~~~v~W~~~ 127 (289)
T 3ejj_X 51 STLTTRNATFKNTGTYRCTELEDPMAGSTTIHLYVKDPAHSWNLLAQEVTVVEGQEAVLPCLITDPA---LKDSVSLMRE 127 (289)
T ss_dssp CEEEESSCCGGGCEEEEEECCC-----CEEEEEEECCSSCSEEESCSEEEEETTSCEEECEEESCGG---GGGSEEEEEG
T ss_pred cEEEEeeeccccCEEEEEEEeccCCcceeEEEEEEeCCCcceecccceEEEecCCceEeEEEccCCC---cceEEEEEec
Confidence 7899999999999999999998877778888999987654 45556777889999999999998 55 44 499986
Q ss_pred cCcccCCCcc-----eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcC
Q psy11131 93 DGRQIPGRTS-----STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGG 141 (150)
Q Consensus 93 ~~~~~~~~~~-----~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~ 141 (150)
++..+..... ...|.|.++...|.|.|.|.+.+......+..+.|.|..
T Consensus 128 ~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~~l~V~~ 181 (289)
T 3ejj_X 128 GGRQVLRKTVYFFSPWRGFIIRKAKVLDSNTYVCKTMVNGRESTSTGIWLKVNR 181 (289)
T ss_dssp GGEECCTTCCEEEETTTEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEES
T ss_pred CCeecCCCccEEECCCCCEEEeecccccCEEEEEEEEeCCCccccccEEEEEEE
Confidence 5544433322 457999999999999999999954332566777888873
No 107
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.74 E-value=6.6e-17 Score=103.79 Aligned_cols=135 Identities=19% Similarity=0.273 Sum_probs=90.2
Q ss_pred CCceEEeC------CeEEEcCCCCCCCeEEEEEeccCC----cceeEEEEEEEecC--------------ceEEeCCCcE
Q psy11131 9 GPRTRVLG------PILAIEGVTAEDSGTYRCSSSNIG----GEATAEVRLQVSTP--------------YRVDVNPPLL 64 (150)
Q Consensus 9 ~~~~~~~~------~~l~i~~~~~~d~G~Y~C~~~~~~----~~~~~~~~l~v~~~--------------~~~~~~~~~~ 64 (150)
..|+.+.. .+|.|.+++.+|+|.|.|.+.+.. ......+.|.|..+ +.+...+...
T Consensus 72 ~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p~~~ 151 (257)
T 3gkz_A 72 KSRISITRDTSKNQVYLQLKSVSSEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIM 151 (257)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSCSEE
T ss_pred cccEEEEEecCCceEEEEECCCChhhCEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCCceE
Confidence 35666653 269999999999999999998852 12234467777754 3455556667
Q ss_pred EEecCCcEEEEEEec-CCCCCCc-EEEEeec--CcccCC------------Ccc--------eeeEEEccCCCCCCceEE
Q psy11131 65 SVHLDGSANFQCEIT-PYDSGPY-LIAWFKD--GRQIPG------------RTS--------STSLVINPVGREDRGIYQ 120 (150)
Q Consensus 65 ~~~~g~~~~l~C~~~-~p~~~~~-~~~w~~~--~~~~~~------------~~~--------~~~l~~~~~~~~~~g~y~ 120 (150)
.+.+|+.+.|.|.+. .+ .+ .+.|++. +..... ..+ ...|.|.++..+|+|.|.
T Consensus 152 ~v~~G~~v~L~C~~~~~~---~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 228 (257)
T 3gkz_A 152 SASPGEKVTLTCSASSSV---SSSHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAASYF 228 (257)
T ss_dssp EECTTCCEEEEEEESSCC---CGGGEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred EEeCCCcEEEEEEEccCc---cceEEEEEEECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCChHHCEEEE
Confidence 889999999999998 66 66 8999874 222110 000 346999999999999999
Q ss_pred EEEEeCCCCceeeeEEEEEcCcCccc
Q psy11131 121 CIARRSDGDVAQGSAELQLGGTRNIK 146 (150)
Q Consensus 121 C~~~~~~g~~~~~~~~l~v~~~p~~~ 146 (150)
|.+.+........-..|.|...++..
T Consensus 229 C~~~~~~~~~fg~gt~l~v~~~~~~~ 254 (257)
T 3gkz_A 229 CHQWSSFPFTFGSGTKLEIKRAPHHH 254 (257)
T ss_dssp EEECSSSSCEECCCEEEEECCC----
T ss_pred EEEccCCceEEcCCEEEEEEeCCCCC
Confidence 99987543222333456666655443
No 108
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.74 E-value=2.4e-17 Score=108.20 Aligned_cols=115 Identities=22% Similarity=0.310 Sum_probs=86.4
Q ss_pred EEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEe---------------------cCceEEeCCCcEEEecCCcEEEEEE
Q psy11131 19 LAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVS---------------------TPYRVDVNPPLLSVHLDGSANFQCE 77 (150)
Q Consensus 19 l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~---------------------~~~~~~~~~~~~~~~~g~~~~l~C~ 77 (150)
|.|.+++.+|+|.|+|.+.+.. ......+.+. .+|.+.. +....+.+|+.+.|.|.
T Consensus 168 L~i~~~~~~d~G~Y~C~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~v~~G~~~~l~C~ 244 (312)
T 2y23_A 168 MFMEKLQDEDEGTYTFQLQDGK--ATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVE-YLSWEVTGECNVLLKCK 244 (312)
T ss_dssp EEESCCCGGGCEEEEEEEESSS--CEEEEEEEECTHHHHHHHHHHHHHHHHHHHHHSSEEEE-EEEEEEETTTEEEEEEE
T ss_pred EEEccCCcccCEeEEEEEEeCC--ceEEEEEEEcchhhhhhcccccccccchhhccCCceee-cceEEEeCCCEEEEEEE
Confidence 9999999999999999997643 3333334432 1122221 12356789999999999
Q ss_pred ec-CCCCCCc-EEEEeecCcccCCCcc------eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEc
Q psy11131 78 IT-PYDSGPY-LIAWFKDGRQIPGRTS------STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLG 140 (150)
Q Consensus 78 ~~-~p~~~~~-~~~w~~~~~~~~~~~~------~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~ 140 (150)
+. .| .+ .+.|++++..+..... ...|.|.++..+|.|.|.|.+.|..| .....+.|.+.
T Consensus 245 ~~~~p---~~~~v~W~~~g~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~G-~~~~~~~l~i~ 311 (312)
T 2y23_A 245 VANIK---KETHIVWYKDEREISVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRG-KDKSRLKLVDE 311 (312)
T ss_dssp EESCC---SSCEEEEEETTEEEEEECCC----CEEEEEECSCSGGGCEEEEEEEESTTC-CEEEEEEECSC
T ss_pred EcCCC---CCCEEEEeeCCEECCCCCcEEEECCEEEEEECcCCHHHCEEEEEEEEcCCC-ceeeeeEEEec
Confidence 99 87 76 9999999877652221 36899999999999999999999999 57777777653
No 109
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.74 E-value=3.1e-18 Score=107.63 Aligned_cols=120 Identities=18% Similarity=0.271 Sum_probs=87.5
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCC-cceeEEEEEEEecCceEEeCCCcEEEecCCcE-EEEEEec--CCCCCCcEEEEee
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIG-GEATAEVRLQVSTPYRVDVNPPLLSVHLDGSA-NFQCEIT--PYDSGPYLIAWFK 92 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~-~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~-~l~C~~~--~p~~~~~~~~w~~ 92 (150)
.+|.|.+++.+|+|.|.|.+.+.. +.....+.|.|..+|.+...+.... ..|+.+ .|.|.+. .| .+.+.|++
T Consensus 78 ~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~P~~~~~~~~~~-~~g~~~~~l~C~~~~g~P---~p~v~W~k 153 (221)
T 3eow_R 78 ASLRMFGLRVEDEGSYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQ-LTGEPVPMARCVSTGGRP---PAQITWHS 153 (221)
T ss_dssp CEEECCCSSCCCCSCBEEEEEESSSCSCEEECCCCCCCCCEEEEEEECCC-CCSSSCCEEEEEEESCSS---CCCEEEEC
T ss_pred ceEEEccCChHHCeEEEEEEEeCCCCceEEEEEEEEEECCCceeecCCcc-cCCceEEEEEEECCCccC---CCeeEEEe
Confidence 589999999999999999998865 6677788888888776553222222 567788 5999976 77 88999987
Q ss_pred cCcccCCC-------cc----eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCcC
Q psy11131 93 DGRQIPGR-------TS----STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGTR 143 (150)
Q Consensus 93 ~~~~~~~~-------~~----~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p 143 (150)
++...... .. .+.|.+.....+|.|.|+|.+.|..+ . ....+.|...|
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~-~--~~~~~~v~~~~ 212 (221)
T 3eow_R 154 DLGGMPQTSQVPGFLSGTVTVTSLWILVPSSQVDGKQVTCKVEHESF-E--KPQLLTVSLTV 212 (221)
T ss_dssp SSSCCCCCEEECCCCBTTBCCEEEEECCCCSCCCCCCEEEEECCSCS-S--SCEEEEECCCC
T ss_pred CCCCCCccceeecCCCCcEEEEEEEEEeCCHHHCCCeEEEEEECCCC-C--CCeEEEEEEEE
Confidence 63322110 10 46789999999999999999999876 2 34445555444
No 110
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.74 E-value=4.4e-17 Score=104.50 Aligned_cols=119 Identities=15% Similarity=0.300 Sum_probs=94.9
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCceEEeCCCcEEEecCCcEEEEEEec--CCCCCCcEEEEeecC
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCEIT--PYDSGPYLIAWFKDG 94 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~--~p~~~~~~~~w~~~~ 94 (150)
..|.|.+++.+|+|.|+|.+.+..+. ..+.|.|..++... .+....+.+|+.+.|.|.+. .| .+.+.|++++
T Consensus 48 ~~l~i~~~~~~d~G~Y~C~~~~~~~s--~~~~l~v~~~~~~~-~~~~~~~~~g~~v~l~C~~~~~~p---~~~v~W~~~g 121 (262)
T 3rjd_A 48 PSYRITSASVNDSGEYRCQRGLSGRS--DPIQLEIHRGWLLL-QVSSRVFTEGEPLALRCHAWKDKL---VYNVLYYRNG 121 (262)
T ss_dssp SEEEESSCCGGGCEEEEEEESSSCCC--CCEEEEEECSSEEE-EESCSEEETTSCEEEEEEEGGGCC---CEEEEEEETT
T ss_pred CeEEEecCCcccCeEEEEEEecCCcc--ccEEEEEeccceEe-cCCCeEEecCCeEEEEEEccCCCC---CceEEEEECC
Confidence 67999999999999999999886543 35567777654433 33345678999999999994 77 8999999998
Q ss_pred cccCCCcceeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCc
Q psy11131 95 RQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGT 142 (150)
Q Consensus 95 ~~~~~~~~~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~ 142 (150)
..+........|.|.++...|.|.|.|.+.|..+ ..+..+.+.|...
T Consensus 122 ~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~~-~~~~~~~l~V~~~ 168 (262)
T 3rjd_A 122 KAFKFFHWNSNLTILKTNISHNGTYHCSGMGKHR-YTSAGISVTVKEL 168 (262)
T ss_dssp EEEEEEEECCCEEESSCCGGGCEEEEEEEESSSE-EEEECEEEEEECS
T ss_pred ccccccCCCCeEEEEECChhhCEEEEEEEeCCCC-ccccceEEEeccC
Confidence 8765443357899999999999999999999886 5777788888763
No 111
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.74 E-value=5.9e-18 Score=110.17 Aligned_cols=124 Identities=24% Similarity=0.267 Sum_probs=94.0
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCce-EEeCCCcEEEecCCcEEEEEEecCCCCCCcEEEEeec-C
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYR-VDVNPPLLSVHLDGSANFQCEITPYDSGPYLIAWFKD-G 94 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~-~~~~~~~~~~~~g~~~~l~C~~~~p~~~~~~~~w~~~-~ 94 (150)
+.|.|.+++.+|+|.|+|.+.+..+..+..+.|.|..++. +...+....+.+|+.+.|.|.+..|. ..+.+.|+++ +
T Consensus 51 ~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~~~~~~~~~v~~g~~v~l~C~~~~~~-~~~~v~W~~~~~ 129 (292)
T 4dkd_C 51 SILSTNNATFQNTGTYRCTEPGDPLGGSAAIHLYVKDPARPWNVLAQEVVVFEDQDALLPCLLTDPV-LEAGVSLVRVRG 129 (292)
T ss_dssp EEEEESSCCGGGCSCEEECCCC----CCEEECCEECCSSCCEEESCSEEEEETTSCEECCEEESSGG-GGSSEEEEEGGG
T ss_pred EEEEEcccccccCEEEEEEEccCCCCcceEEEEEEcCccccccccCCeEEEcCCCcEEEeeeCCCCC-cceeEEEEecCC
Confidence 5899999999999999999999877778888899987665 34556677889999999999998330 0378999987 4
Q ss_pred cccCCCcc-----eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcC
Q psy11131 95 RQIPGRTS-----STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGG 141 (150)
Q Consensus 95 ~~~~~~~~-----~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~ 141 (150)
..+..... ...|.|.++...|.|.|.|.+.|..+...+..+.|.|..
T Consensus 130 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~ 181 (292)
T 4dkd_C 130 RPLMRHTNYSFSPWHGFTIHRAKFIQSQDYQCSALMGGRKVMSISIRLKVQK 181 (292)
T ss_dssp CCCCSSCCEECCSSSCCEETTCCGGGCSEEEEEECSTTSCEECCCEEEEEEC
T ss_pred CccccCCcccccCCceEEECCCCHHHCeEEEEEEEeCCCceeEEEEEEEEeC
Confidence 43332222 345999999999999999999988774455578888876
No 112
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.74 E-value=7.9e-17 Score=106.61 Aligned_cols=134 Identities=14% Similarity=0.188 Sum_probs=100.3
Q ss_pred CCCceEEe-----CCeEEEcCCCCCCCeEEEEE-eccCCcceeEEEEEEEecCceEE--eCCCcEEEecC---CcEEEEE
Q psy11131 8 PGPRTRVL-----GPILAIEGVTAEDSGTYRCS-SSNIGGEATAEVRLQVSTPYRVD--VNPPLLSVHLD---GSANFQC 76 (150)
Q Consensus 8 ~~~~~~~~-----~~~l~i~~~~~~d~G~Y~C~-~~~~~~~~~~~~~l~v~~~~~~~--~~~~~~~~~~g---~~~~l~C 76 (150)
...|+.+. ..+|.|.+++.+|+|.|+|. ..+..+.....+.|.|..+|.+. ..+....+.+| +.+.|.|
T Consensus 78 ~~~r~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~g~~~~~~~l~C 157 (331)
T 3u83_A 78 YRERVEFLRPSFTDGTIRLSRLELEDEGVYICEFATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATC 157 (331)
T ss_dssp CTTTEEESSCSSSBCCEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECSSCEEECTTCCCCEEEEEE
T ss_pred cCCceEecccCCCCceEEEcccCcccCcEEEEEEEecCCCccEEEEEEEEecCCcceeecCCCceeecCCCccceEEEEE
Confidence 34666664 27899999999999999998 55556777888899999877653 34556677888 7799999
Q ss_pred E-ec-CCCCCCcEEEEeecCcccC-------CCcc---eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCcCc
Q psy11131 77 E-IT-PYDSGPYLIAWFKDGRQIP-------GRTS---STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGTRN 144 (150)
Q Consensus 77 ~-~~-~p~~~~~~~~w~~~~~~~~-------~~~~---~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p~ 144 (150)
. .. .| .+.+.|+++..... .... ...|.+..+...|.|.|.|.+.|..| ..+.++.|.|..+|.
T Consensus 158 ~~~~~~p---~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~-~~~~~~~l~V~~~P~ 233 (331)
T 3u83_A 158 TSANGKP---PSVVSWETRLKGEAEYQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMD-RFKESLTLNVQYEPE 233 (331)
T ss_dssp EEEEEBS---CCEEEEEESSCCEEEEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEEETTE-EEEEEEECCEEEEEE
T ss_pred EecCCcC---CceEEEEcCCCCccccceeECCCCcEEEEEEEEEEeccccCCCEEEEEEecCCC-cceeeEEEEEecCCe
Confidence 8 55 88 89999998532111 1111 35688888899999999999999987 567777777766654
Q ss_pred c
Q psy11131 145 I 145 (150)
Q Consensus 145 ~ 145 (150)
.
T Consensus 234 ~ 234 (331)
T 3u83_A 234 V 234 (331)
T ss_dssp E
T ss_pred E
Confidence 3
No 113
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.74 E-value=7.3e-17 Score=90.64 Aligned_cols=86 Identities=23% Similarity=0.388 Sum_probs=72.6
Q ss_pred CceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCcc--------eeeEEEccCCCCCCceEEEEEE
Q psy11131 54 PYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRTS--------STSLVINPVGREDRGIYQCIAR 124 (150)
Q Consensus 54 ~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~~--------~~~l~~~~~~~~~~g~y~C~~~ 124 (150)
+|.+...+....+.+|+.+.|.|.+. .| .|.+.|++++..+..... ...|.|.++..+|.|.|.|.+.
T Consensus 13 pP~f~~~p~~~~v~~G~~~~l~C~~~G~P---~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 89 (107)
T 3knb_B 13 PPCFLRFPRPVRVVSGAEAELKCVVLGEP---PPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRAR 89 (107)
T ss_dssp EEEEEECCCCEEEETTSCEEEEEEEEEES---CCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCEEEeCCCcEEEeCCCcEEEEEEEEEec---CCEEEEEECcccccceeeEEEeecCceEEEEEecCChhhCEEEEEEEE
Confidence 45666667778899999999999999 99 999999999988765443 3579999999999999999999
Q ss_pred eCCCCceeeeEEEEEcCcC
Q psy11131 125 RSDGDVAQGSAELQLGGTR 143 (150)
Q Consensus 125 ~~~g~~~~~~~~l~v~~~p 143 (150)
|..| ..+..+.|.|.++|
T Consensus 90 N~~G-~~~~~~~l~V~~pP 107 (107)
T 3knb_B 90 NAAG-EAYAAAAVTVLEPP 107 (107)
T ss_dssp ETTE-EEEEEEEEEEEC--
T ss_pred ECCC-EEEEEEEEEEEcCC
Confidence 9999 67788999998765
No 114
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.74 E-value=1.9e-16 Score=106.68 Aligned_cols=133 Identities=20% Similarity=0.187 Sum_probs=99.1
Q ss_pred CCceEEeC--CeEEEcCCCCCCCeEEEEEeccCCcce-----eEEEEEEEec------CceEEe-CCCcEEEecCCcEEE
Q psy11131 9 GPRTRVLG--PILAIEGVTAEDSGTYRCSSSNIGGEA-----TAEVRLQVST------PYRVDV-NPPLLSVHLDGSANF 74 (150)
Q Consensus 9 ~~~~~~~~--~~l~i~~~~~~d~G~Y~C~~~~~~~~~-----~~~~~l~v~~------~~~~~~-~~~~~~~~~g~~~~l 74 (150)
+.+..... +.|.|.+++.+|+|.|+|.+.+..+.. +....|.|.. +|.+.. .+....+.+|+.+.|
T Consensus 148 ~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~s~~~~l~v~~~~~~~~~P~~~~~~~~~~~~~~G~~v~l 227 (382)
T 1cs6_A 148 DGRRFVSQTTGNLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAEDARQYAPSIKAKFPADTYALTGQMVTL 227 (382)
T ss_dssp CSSEEECTTTCCEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCCCEEEEEEECCCSEEEEETTCCEEE
T ss_pred CceEEEecCceEEEEEeeCcccCeeEEEEEEEccccccceeEccceeeccchhhcccCCCceeccCCCceEEeCCCeEEE
Confidence 34444433 789999999999999999998865322 1224455432 333333 345677889999999
Q ss_pred EEEec-CCCCCCcEEEEeecCcccCCCc--ceeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCcCcc
Q psy11131 75 QCEIT-PYDSGPYLIAWFKDGRQIPGRT--SSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGTRNI 145 (150)
Q Consensus 75 ~C~~~-~p~~~~~~~~w~~~~~~~~~~~--~~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p~~ 145 (150)
.|.+. .| .+.+.|++++..+.... ....|.|.++..+|.|.|.|.+.|..| .....+.|.|..+|..
T Consensus 228 ~C~~~g~p---~~~i~W~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g-~~~~~~~l~V~~~p~~ 297 (382)
T 1cs6_A 228 ECFAFGNP---VPQIKWRKLDGSQTSKWLSSEPLLHIQNVDFEDEGTYECEAENIKG-RDTYQGRIIIHAQPDW 297 (382)
T ss_dssp ECEEEEES---CCEEEEEECCSCCSCCCSBSSSEEEECSCCGGGCEEEEEEEEETTE-EEEEEEEEEEEEEEEE
T ss_pred EEEEccCC---CCEEEEEECCcccccEEecCCcEEEEccCChhhCEEEEEEEEcCCC-eEEEEEEEEEecCCCc
Confidence 99999 88 89999999877654321 157899999999999999999999988 5777788888766543
No 115
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.73 E-value=1.3e-16 Score=103.77 Aligned_cols=115 Identities=16% Similarity=0.174 Sum_probs=87.4
Q ss_pred CCCCeEEEEEeccCCcc-eeEEEEEEEec--CceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCc
Q psy11131 26 AEDSGTYRCSSSNIGGE-ATAEVRLQVST--PYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRT 101 (150)
Q Consensus 26 ~~d~G~Y~C~~~~~~~~-~~~~~~l~v~~--~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~ 101 (150)
..|+|.|+|.+.+..+. .+....|.|.. ++.+...+....+.+|+.+.|.|.+. .| .+.+.|++++.......
T Consensus 150 ~~d~G~Y~C~a~n~~~~~~s~~~~l~v~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p---~p~v~W~~~~~~~~~~~ 226 (289)
T 3mjg_X 150 IFEDRSYICKTTIGDREVDSDAYYVYRLQVSSINVSVNAVQTVVRQGENITLMCIVIGNE---VVNFEWTYPRKESGRLV 226 (289)
T ss_dssp CCCSSEEEEEEEETTEEEECCCEEEEECCCCCCCCEEEESCSEEETTSCEEEEEEEESCS---SBEEEEECTTSSSSCCC
T ss_pred eccCcEEEEEEEeCCceeeeeeEEEEecCCCCCCcEEeCCcceeEcCCCEEEEEEECCCC---CcceEEEcCCccCCCcc
Confidence 67999999999876544 33445666664 44454444446688999999999999 99 99999997655332210
Q ss_pred -------------ceeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCcCc
Q psy11131 102 -------------SSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGTRN 144 (150)
Q Consensus 102 -------------~~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p~ 144 (150)
....|.|.++..+|.|.|.|.+.|..| ....++.|.|.+.|.
T Consensus 227 ~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G-~~~~~~~l~v~~~~~ 281 (289)
T 3mjg_X 227 EPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVN-DHQDEKAINITVVES 281 (289)
T ss_dssp CCEEEESCTTTTEEEEEEEESSCCSSCCEEEEEEEEETTT-TEEEEEEEEEEEEC-
T ss_pred cccccccCCcceEEEEEEEEcccChhhCcEEEEEeecCCC-CceeEEEEEEEEEec
Confidence 146899999999999999999999999 678888888876653
No 116
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.73 E-value=1.9e-16 Score=98.05 Aligned_cols=113 Identities=14% Similarity=0.232 Sum_probs=79.4
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcce-----eEEEEEEEecC---ceEEeCCCcEEEecCCcEEEEEEe-c-CCCCCCc
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEA-----TAEVRLQVSTP---YRVDVNPPLLSVHLDGSANFQCEI-T-PYDSGPY 86 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~-----~~~~~l~v~~~---~~~~~~~~~~~~~~g~~~~l~C~~-~-~p~~~~~ 86 (150)
.+|.|.+++.+|+|.|+|.+.+..+.. ...+.|.|..+ |.+.. .....|+.+.|.|.+ . .| .|
T Consensus 65 ~~L~I~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~p~~~~----~~~~~g~~~~l~C~~~~g~P---~p 137 (201)
T 1dr9_A 65 LSIVILALRPSDEGTYECVVLKYEKDAFKREHLAEVTLSVKADFPTPSISD----FEIPTSNIRRIICSTSGGFP---EP 137 (201)
T ss_dssp TEEEECSCCGGGCEEEEEEEEECCTTSCEEEEEEEEEEEEECCCCCCEEEE----EECSSTTEEEEEEEEEEESS---CE
T ss_pred cEEEEecccchhCeEEEEEEEcCCCCccccccccEEEEEEcCCCCCCceEe----ccCCCCCeEEEEEecCCccC---CC
Confidence 689999999999999999999865543 35677777764 22211 111457889999999 4 88 89
Q ss_pred EEEEeecCcccCCCcc------e-ee---EEEccCCCCCCceEEEEEEeCCCCceeeeEEE
Q psy11131 87 LIAWFKDGRQIPGRTS------S-TS---LVINPVGREDRGIYQCIARRSDGDVAQGSAEL 137 (150)
Q Consensus 87 ~~~w~~~~~~~~~~~~------~-~~---l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l 137 (150)
.+.|++++..+..... . .. ..+..+...|.|.|.|.|.|..| ..+..+.+
T Consensus 138 ~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~-~~s~~~~~ 197 (201)
T 1dr9_A 138 HLSWLENGEELNAINTTVSQDPETELYAVSSKLDFNMTTNHSFMCLIKYGHL-RVNQTFNW 197 (201)
T ss_dssp EEEEEESSCEECCSEEEEEECTTTCCEEEEEEEEEETTSCEEEEEEEEETTC-CEEEEEEE
T ss_pred EEEEEECCEECccccceEEecCCCcEEEEEEEEEEEecCCCEEEEEEecCcc-eeeeEEec
Confidence 9999999877653321 1 11 12234456799999999999988 45555443
No 117
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.73 E-value=1.5e-16 Score=107.77 Aligned_cols=134 Identities=20% Similarity=0.251 Sum_probs=100.0
Q ss_pred CCCCceEEeC-CeEEEcCCCCCC-CeEEEEEeccCCcce---eEEEEEEEecCc-------eEEeCC---CcEEEecCCc
Q psy11131 7 LPGPRTRVLG-PILAIEGVTAED-SGTYRCSSSNIGGEA---TAEVRLQVSTPY-------RVDVNP---PLLSVHLDGS 71 (150)
Q Consensus 7 ~~~~~~~~~~-~~l~i~~~~~~d-~G~Y~C~~~~~~~~~---~~~~~l~v~~~~-------~~~~~~---~~~~~~~g~~ 71 (150)
..+.++.... +.|.|.++...| .|.|+|.+.+..+.. .....+.|...+ .+.... ....+.+|+.
T Consensus 160 ~~~~~~~~~~~~~l~i~~v~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~ 239 (404)
T 3p3y_A 160 TQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMD 239 (404)
T ss_dssp CCCSSEEECTTSCEEESSCCSGGGSSCBEEEEECTTTCCEEECCCBCEEEECCSCCCCCCCCBSSSCSSEEEEEEETTSC
T ss_pred CCCCcEEEcCCCcEEEEeeeeccCCcceEEEEEeccccceeccCceeEEEeccCCccccCCccccccCCCCCceEecCCC
Confidence 3445555544 789999999999 599999999876542 223455554321 111111 2345789999
Q ss_pred EEEEEEec-CCCCCCcEEEEeecCcccCCCcc-----eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCcCc
Q psy11131 72 ANFQCEIT-PYDSGPYLIAWFKDGRQIPGRTS-----STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGTRN 144 (150)
Q Consensus 72 ~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~~-----~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p~ 144 (150)
+.|.|.+. .| .+.+.|++++..+..... ...|.|.++..+|.|.|.|.+.|..| .....+.|.|..+|.
T Consensus 240 v~l~C~~~g~p---~~~v~W~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g-~~~~~~~l~V~~~p~ 314 (404)
T 3p3y_A 240 LLLECIASGVP---TPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMG-SIRHTISVRVKAAPY 314 (404)
T ss_dssp EEEECCBCCSS---CCEEEEEETTBCCCTTTEEEEGGGTEEEESSCCGGGCEEEEEEEECSSC-EEEEEEEEEEEEEEE
T ss_pred EEEEEEECCCC---CCcEEEEECCEECCCCcccccccCceEEEccCCHhHCEEEEEEEEeCCC-cEEEEEEEEEeCCCe
Confidence 99999998 88 889999999887754432 46899999999999999999999998 577788888877654
No 118
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.73 E-value=1.6e-17 Score=109.28 Aligned_cols=120 Identities=19% Similarity=0.251 Sum_probs=92.7
Q ss_pred CCCCceEEeCCeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEec-CceEEeCC---CcEEEecCCcEEEEEEe----
Q psy11131 7 LPGPRTRVLGPILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVST-PYRVDVNP---PLLSVHLDGSANFQCEI---- 78 (150)
Q Consensus 7 ~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~-~~~~~~~~---~~~~~~~g~~~~l~C~~---- 78 (150)
..+.++...+++|.|.+++.+|+|.|+|.+.+..+.......+.+.. +|.+...+ ....+..|+.+.|.|.+
T Consensus 52 ~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~v~v~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~ 131 (315)
T 1itb_B 52 EQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRIKISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFF 131 (315)
T ss_dssp CTTSSSEECSSBEECTTCCGGGCSCCEECCCSSSCCCCEECCCEEECCCTTSSSCGGGEEEEEEETTSCEEEECSSCTTT
T ss_pred ccCCcEeccCCeEEECCCChhhCEEEEEEEeCCceEEEEEEEEEEeCCCCCcccccccccceEEecCCCeEEEEeccccc
Confidence 34567777778999999999999999999999877766665665543 22222221 12457889999999998
Q ss_pred --c-CCCCCCcEEEEeecCcccCCCcc-----eeeEEEccCCCCCCceEEEEEE-eCCCC
Q psy11131 79 --T-PYDSGPYLIAWFKDGRQIPGRTS-----STSLVINPVGREDRGIYQCIAR-RSDGD 129 (150)
Q Consensus 79 --~-~p~~~~~~~~w~~~~~~~~~~~~-----~~~l~~~~~~~~~~g~y~C~~~-~~~g~ 129 (150)
. .| .+.+.|++++..+..... ...|.|.++...|.|.|.|.+. |..|.
T Consensus 132 ~~~g~p---~~~i~W~k~~~~l~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~~n~~g~ 188 (315)
T 1itb_B 132 KNENNE---LPKLQWYKDCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGK 188 (315)
T ss_dssp CTTTTC---CCCCEEEETTEECCCCSSSEEEETTEEEESSCCGGGCEEEEEEEEEEETTE
T ss_pred ccCCCC---CCEEEEEECCEECCCccceEeecCceEEEEeceehhCcEEEEEEEcCCCCc
Confidence 6 77 889999999987754322 5689999999999999999999 77773
No 119
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.73 E-value=7.4e-18 Score=105.18 Aligned_cols=117 Identities=21% Similarity=0.302 Sum_probs=85.9
Q ss_pred CceEEeC----CeEEEcCCCCCCCeEEEEEeccCCc--ceeEEEEEEEe----cCceEEeCCCcEEEecCCcEEEEEEec
Q psy11131 10 PRTRVLG----PILAIEGVTAEDSGTYRCSSSNIGG--EATAEVRLQVS----TPYRVDVNPPLLSVHLDGSANFQCEIT 79 (150)
Q Consensus 10 ~~~~~~~----~~l~i~~~~~~d~G~Y~C~~~~~~~--~~~~~~~l~v~----~~~~~~~~~~~~~~~~g~~~~l~C~~~ 79 (150)
.|+.+.. .+|.|.+++.+|+|.|.|.+.+..+ .....+.|.|. .+|.+...+.......|+.+.|.|.+.
T Consensus 57 ~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~ 136 (211)
T 3tv3_L 57 DRFSGSKSGNTASLTVSGLQTDDEAVYYCGSLVGNWDVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLIS 136 (211)
T ss_dssp TTEEEEEETTEEEEEEESCCGGGCEEEEEEEEETTTEEEECCCEEEEECCSCCBCCEEEEECCCHHHHHTTCEEEEEEEE
T ss_pred CcEEEEccCCEEEEEECCCChhHCEEEEEEEecCCCceeECCCceEEEeCCCCcCCeeEecCCchhhhcCCCeEEEEEee
Confidence 5665433 4799999999999999999998766 34455778887 445554444333334799999999998
Q ss_pred -CC-CCCCcEEEEeecCcccCCCc-----------c---eeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 80 -PY-DSGPYLIAWFKDGRQIPGRT-----------S---STSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 80 -~p-~~~~~~~~w~~~~~~~~~~~-----------~---~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
.+ . .+.+.|++++..+.... . ...|.+..+..+|.|.|.|.+.|..+
T Consensus 137 g~~p~--~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~v~~~~~ 199 (211)
T 3tv3_L 137 DFYPG--AVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGS 199 (211)
T ss_dssp EEBSS--CCEEEEEETTEEECTTEEECCCEECTTSSEEEEEEEEECHHHHHHSSCEEEEEEETTE
T ss_pred eecCC--CeEEEEEECCeecCCCcccCCceECCCCCEEEEEEEEEcHHHhCCCCeEEEEEEECCC
Confidence 42 1 58999999988764311 0 25688888888889999999999876
No 120
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.73 E-value=7.5e-17 Score=105.85 Aligned_cols=126 Identities=16% Similarity=0.195 Sum_probs=92.3
Q ss_pred CeEEEcCCCCCCCeEEEEEeccC-CcceeEEEEEEEecCceEE--eCCCcEEEecCCcEEEEEEec--CCCCCCcEEEEe
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNI-GGEATAEVRLQVSTPYRVD--VNPPLLSVHLDGSANFQCEIT--PYDSGPYLIAWF 91 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~-~~~~~~~~~l~v~~~~~~~--~~~~~~~~~~g~~~~l~C~~~--~p~~~~~~~~w~ 91 (150)
.+|.|.+++.+|+|.|+|.+.+. .+.......+.+...+... ..+.......|+.+.+.|... .| .+.+.|+
T Consensus 74 ~sL~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~C~~~~g~P---~~~i~W~ 150 (308)
T 4fom_A 74 ATITLHNIGFSDSGKYICKAVTFPLGNAQSSTTVTVLVEPTVSLIKGPDSLIDGGNETVAAICIAATGKP---VAHIDWE 150 (308)
T ss_dssp CCEEECSCCGGGCEEEEEEEEETTTEEEEEEEEEEEEBCCEEEEEECSSCCCTTCSCEEEEEEEEEEEBS---CCEEEEC
T ss_pred eEEEEccCCHHHCEEEEEEEeeCCCcceeeeeEEEeeeccccccccccceeEEcCCceEEEEEEecCCcC---CceEEEE
Confidence 57999999999999999999875 4566667777777554432 334444455678899999865 88 8999999
Q ss_pred ecCcccCCCcc---------eeeEEEccCCCCCCceEEEEEEeCCCC-ceeeeEEEEEcCcCcc
Q psy11131 92 KDGRQIPGRTS---------STSLVINPVGREDRGIYQCIARRSDGD-VAQGSAELQLGGTRNI 145 (150)
Q Consensus 92 ~~~~~~~~~~~---------~~~l~~~~~~~~~~g~y~C~~~~~~g~-~~~~~~~l~v~~~p~~ 145 (150)
+++..+..... .+.|.+..+...|.|.|.|.+.|..+. .....+.|.|..+|..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~~ 214 (308)
T 4fom_A 151 GDLGEMESTTTSFPNETATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQYAPEV 214 (308)
T ss_dssp CCSSBCCEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCCEEEEE
T ss_pred ECCcccccccceeeeecccccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEecCCee
Confidence 98876643221 357889999999999999999998763 2344555556555543
No 121
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.73 E-value=1.4e-16 Score=101.63 Aligned_cols=129 Identities=19% Similarity=0.270 Sum_probs=90.3
Q ss_pred CCceEEeC------CeEEEcCCCCCCCeEEEEEeccCCcc--eeEEEEEEEecC---------------ceEEeCCCcEE
Q psy11131 9 GPRTRVLG------PILAIEGVTAEDSGTYRCSSSNIGGE--ATAEVRLQVSTP---------------YRVDVNPPLLS 65 (150)
Q Consensus 9 ~~~~~~~~------~~l~i~~~~~~d~G~Y~C~~~~~~~~--~~~~~~l~v~~~---------------~~~~~~~~~~~ 65 (150)
..|+.+.. .+|.|.+++.+|+|.|+|.+.+..+. ....+.|.|... +.+...+....
T Consensus 67 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (247)
T 2ghw_B 67 KGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLS 146 (247)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEE
T ss_pred cCcEEEEEeCCCCEEEEEECcCCHHHCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEE
Confidence 35666643 37999999999999999999886322 223457777753 22334455667
Q ss_pred EecCCcEEEEEEec-CCCCCCcEEEEee--cCcccC------------CCc--------ceeeEEEccCCCCCCceEEEE
Q psy11131 66 VHLDGSANFQCEIT-PYDSGPYLIAWFK--DGRQIP------------GRT--------SSTSLVINPVGREDRGIYQCI 122 (150)
Q Consensus 66 ~~~g~~~~l~C~~~-~p~~~~~~~~w~~--~~~~~~------------~~~--------~~~~l~~~~~~~~~~g~y~C~ 122 (150)
+.+|+.+.|.|.+. .| .+.+.|++ ++..+. ... ....|.|.++..+|.|.|.|.
T Consensus 147 v~~G~~v~L~C~~~~~~---~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 223 (247)
T 2ghw_B 147 LSPGERATLSCRASQSV---RSNLAWYQQKPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQ 223 (247)
T ss_dssp ECTTSCEEEEEEESSCC---TTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCEEEEEE
T ss_pred ecCCCcEEEEEEeCCCc---cceEEEEEECCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCEEEEEE
Confidence 88999999999999 77 78999998 443321 000 134699999999999999999
Q ss_pred EEeCCCCceeeeEEEEEc
Q psy11131 123 ARRSDGDVAQGSAELQLG 140 (150)
Q Consensus 123 ~~~~~g~~~~~~~~l~v~ 140 (150)
+.+...........|.|.
T Consensus 224 a~~~~~~~~g~~t~l~V~ 241 (247)
T 2ghw_B 224 QRSNWPPTFGQGTKVEVK 241 (247)
T ss_dssp ECSSSSCEECCCEEEEEC
T ss_pred EccCCCceEcCCEEEEEC
Confidence 997543223334455554
No 122
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.73 E-value=4.1e-16 Score=111.51 Aligned_cols=131 Identities=17% Similarity=0.224 Sum_probs=99.3
Q ss_pred CceEEeC-CeEEEcCCCCCCCeEEEEEeccC-CcceeEEEEEEEec---CceEEeCCCcEEEecCCcEEEEEEecCCCCC
Q psy11131 10 PRTRVLG-PILAIEGVTAEDSGTYRCSSSNI-GGEATAEVRLQVST---PYRVDVNPPLLSVHLDGSANFQCEITPYDSG 84 (150)
Q Consensus 10 ~~~~~~~-~~l~i~~~~~~d~G~Y~C~~~~~-~~~~~~~~~l~v~~---~~~~~~~~~~~~~~~g~~~~l~C~~~~p~~~ 84 (150)
+|+.+.. ++|.|.+++.+|+|.|+|.+.+. .+.......|.|.. +|.+.. .....+..|+.+.|.|.+..|
T Consensus 63 gr~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~-~~~~~v~~g~~v~l~C~~~~p--- 138 (642)
T 1e07_A 63 GREIIYPNASLLIQNIIQNDTGFYTLHVIKSDLVNEEATGQFRVYPELPKPSISS-NNSKPVEDKDAVAFTCEPETQ--- 138 (642)
T ss_pred CceeeccCCcEEECCCCcccCcEEEEEEEcCCCeEEEEEEEEEecccCCCCcEEc-cCceeEecCCcEEEEEECCCC---
Confidence 3544443 78999999999999999998875 34446667788875 233332 233557789999999998766
Q ss_pred CcEEEEeecCcccCCCcc------eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCcCc
Q psy11131 85 PYLIAWFKDGRQIPGRTS------STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGTRN 144 (150)
Q Consensus 85 ~~~~~w~~~~~~~~~~~~------~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p~ 144 (150)
.+.+.|++++..+....+ ...|.|.++...|.|.|.|.+.|..|...+..+.|.|..+|+
T Consensus 139 ~~~v~W~~~g~~l~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~p~ 204 (642)
T 1e07_A 139 DATYLWWVNNQSLPVSPRLQLSNGNRTLTLFNVTRNDTASYKCETQNPVSARRSDSVILNVLYGPD 204 (642)
T ss_pred CeeEEEEECCeECCCCCceEEcCCCCEEEEeCCCcccCeeEEEEEecCCCCcccceEEEEEEeCCC
Confidence 899999999887754432 458999999999999999999998875456677888875543
No 123
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.73 E-value=1.5e-17 Score=114.32 Aligned_cols=117 Identities=17% Similarity=0.196 Sum_probs=93.4
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCc-c---eeEEEEEEEecCceEEeCC--CcEEEecCCcEEEEEEec-CCCCCCcEEE
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGG-E---ATAEVRLQVSTPYRVDVNP--PLLSVHLDGSANFQCEIT-PYDSGPYLIA 89 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~-~---~~~~~~l~v~~~~~~~~~~--~~~~~~~g~~~~l~C~~~-~p~~~~~~~~ 89 (150)
..|.|.++..+|.|.|+|.+.|..+ . ....+.|.|..+|.+...+ ....+.+|+.+.|.|.+. .| .|.+.
T Consensus 327 ~~L~i~~~~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~V~~~P~~~~~~~p~~~~~~~g~~~~l~C~~~g~P---~p~i~ 403 (450)
T 1z7z_I 327 AQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWGNP---LPELK 403 (450)
T ss_dssp CCEEEECCGGGTTCEEEEEEEEEETTEEEEEEEEEECEEEEEEECCSTTSCSEEEEETTCEECCCCCCEEES---CCEEE
T ss_pred EEEEEecCcccCCceEEEEEEcCCCCcccccceeEEEEEecCCceeeccCCCceeEcCCCeEEEEEecccCC---CCcEE
Confidence 5799999999999999999986543 3 3466788888877765543 556788999999999999 99 99999
Q ss_pred EeecCcccCCCcceeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCc
Q psy11131 90 WFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGT 142 (150)
Q Consensus 90 w~~~~~~~~~~~~~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~ 142 (150)
|++++..+.... ..+ .+..+|.|.|.|.|.|..| ..+..+.|.|.++
T Consensus 404 W~~~g~~~~~~g--~~~---~v~~~d~G~Y~C~a~N~~G-~~~~~~~l~V~~~ 450 (450)
T 1z7z_I 404 CLKDGTFPLPIG--ESV---TVTRDLEGTYLCRARSTQG-EVTREVTVNVLSP 450 (450)
T ss_dssp EEETTTEECCTT--SCE---ECCGGGCEEEEEEEEETTE-EEEEEEEEEEECC
T ss_pred EEECCcccCCCC--CeE---eEehhhCeEEEEEEEeCCC-ceeEEEEEEEEcC
Confidence 999987443322 223 5778999999999999999 6788888888653
No 124
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.72 E-value=3.5e-16 Score=100.40 Aligned_cols=116 Identities=19% Similarity=0.316 Sum_probs=85.5
Q ss_pred CceEEeC------CeEEEcCCCCCCCeEEEEEeccC------------CcceeEEEEEEEecC---------------ce
Q psy11131 10 PRTRVLG------PILAIEGVTAEDSGTYRCSSSNI------------GGEATAEVRLQVSTP---------------YR 56 (150)
Q Consensus 10 ~~~~~~~------~~l~i~~~~~~d~G~Y~C~~~~~------------~~~~~~~~~l~v~~~---------------~~ 56 (150)
.|+.+.. .+|.|.+++.+|+|.|.|.+.+. .......+.|.|... +.
T Consensus 72 ~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~ 151 (256)
T 3juy_B 72 DRVTFTADTSANTAYMELRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIV 151 (256)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCC
T ss_pred ceEEEEEecCCCEEEEEECCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeE
Confidence 5777662 35999999999999999999886 222344567888763 34
Q ss_pred EEeCCCcEEEecCCcEEEEEEec-CCCCCC-cEEEEeec--CcccC------------CCcc--------eeeEEEccCC
Q psy11131 57 VDVNPPLLSVHLDGSANFQCEIT-PYDSGP-YLIAWFKD--GRQIP------------GRTS--------STSLVINPVG 112 (150)
Q Consensus 57 ~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~-~~~~w~~~--~~~~~------------~~~~--------~~~l~~~~~~ 112 (150)
+...+....+.+|+.+.|.|.+. .+ . +.+.|++. +.... ...+ ...|.|.++.
T Consensus 152 ~~~~~~~~~v~~G~~v~L~C~~~~~~---~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 228 (256)
T 3juy_B 152 LTQAPGTLSLSPGERATFSCRSSHSI---RSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVE 228 (256)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCC---TTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC
T ss_pred EEecCCeEEEeCCCCEEEEEEECCCc---CCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCC
Confidence 45556677889999999999998 66 5 89999873 22111 0011 3469999999
Q ss_pred CCCCceEEEEEEeCCC
Q psy11131 113 REDRGIYQCIARRSDG 128 (150)
Q Consensus 113 ~~~~g~y~C~~~~~~g 128 (150)
.+|+|.|.|.+.+...
T Consensus 229 ~~DsG~Y~C~~~~~~~ 244 (256)
T 3juy_B 229 PEDFALYYCQVYGASS 244 (256)
T ss_dssp GGGCSEEEEEECCSSC
T ss_pred HhHCEEEEEEEeeCCC
Confidence 9999999999987544
No 125
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.72 E-value=3.3e-16 Score=103.29 Aligned_cols=121 Identities=18% Similarity=0.246 Sum_probs=89.6
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCC-----cceeEEEEEEEec---CceEEeCCCcEEEecCCcEEEEEEecCCCCCCcEE
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIG-----GEATAEVRLQVST---PYRVDVNPPLLSVHLDGSANFQCEITPYDSGPYLI 88 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~-----~~~~~~~~l~v~~---~~~~~~~~~~~~~~~g~~~~l~C~~~~p~~~~~~~ 88 (150)
+.|.|.+++.+|+|.|+|.+.+.. +..+..+.|.|.. +|.+...+... +.+|+.+.|.|.+..+ .+.+
T Consensus 74 ~~L~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s~~~~l~V~~~~~~p~~~~~~~~~-v~~G~~v~L~C~~~~~---~~~~ 149 (316)
T 3vh8_G 74 ESFNMSPVTTAHAGNYTCRGSHPHSPTGWSAPSNPVVIMVTGNHRKPSLLAHPGPL-VKSGERVILQCWSDIM---FEHF 149 (316)
T ss_dssp SCEEECSCCGGGCEEEEEEEBCSSSSSSBCCCCCCEEEEEECSSCCCEEEEESCSE-EETTCCEEEEEEESSC---CSEE
T ss_pred EEEEECCCCcccCeEEEEEEEcCCCCcceecCCCcEEEEEecCCCCCeEEecCCCc-cCCCCeEEEEEcCCCC---CcEE
Confidence 789999999999999999987532 2345567777764 34444444433 7899999999999744 6789
Q ss_pred EEeecCcccCCCc---------ceeeEEEccCCCCCCceEEEEEEeCCCCc----eeeeEEEEEcC
Q psy11131 89 AWFKDGRQIPGRT---------SSTSLVINPVGREDRGIYQCIARRSDGDV----AQGSAELQLGG 141 (150)
Q Consensus 89 ~w~~~~~~~~~~~---------~~~~l~~~~~~~~~~g~y~C~~~~~~g~~----~~~~~~l~v~~ 141 (150)
.|++++..+.... ....|.|.++..+|.|.|.|.+.|..|.. .+..+.+.|..
T Consensus 150 ~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~ 215 (316)
T 3vh8_G 150 FLHKEGISKDPSRLVGQIHDGVSKANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTG 215 (316)
T ss_dssp EEEETTCCSCCEEEECEEETTEEEEEEEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEEC
T ss_pred EEEECCCccccceeeeeecCCCceEEEEECCCChhhCceEEEEEecCCCCccccCCCCCEEEEecC
Confidence 9999887654221 15689999999999999999999987621 25566777754
No 126
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.72 E-value=1.9e-16 Score=96.84 Aligned_cols=107 Identities=16% Similarity=0.215 Sum_probs=79.5
Q ss_pred CceEEe-C-CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCceEEeCCCcEEEecCCcEEEEEEec-CCCCCCc
Q psy11131 10 PRTRVL-G-PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPY 86 (150)
Q Consensus 10 ~~~~~~-~-~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~ 86 (150)
.|+.+. . ++|.|.+++.+|+|.|.|.+.+.. .....+.|.|.+++. .... ...+..+.|.|.+. .| .+
T Consensus 60 ~R~~l~~~~~sL~I~~v~~~D~G~Y~C~v~~~~-~~~~~~~L~V~~~~~----~P~i-~~~~~~v~L~C~~~~gp---~p 130 (180)
T 2dru_A 60 DRVDLDKTNGALRIYNVSKEDRGDYYMRMLHET-EDQWKITMEVYEMVS----KPMI-YWECSNATLTCEVLEGT---DV 130 (180)
T ss_dssp TTEEECTTTCCEEECSCCGGGCEEEEEEEESSS-EEEEEEEEEEECCCC----CCEE-EEEGGGTEEEEECSSCT---TC
T ss_pred CeEEEeCCCccEEEcCCCHHHCeEEEEEEEcCC-eEEEEEEEEEECCCC----CCEE-EecCCCEEEEEEeCCCC---CC
Confidence 677773 3 889999999999999999987765 556677888876421 1112 22446799999996 77 89
Q ss_pred EEEEeecCcccCCCcceeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 87 LIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 87 ~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
.+.|++++..+.. .....+.+.. .+|.|.|+|.+.|..+
T Consensus 131 ~i~W~~~~~~l~~-~~~~~l~~~~--~~d~g~Y~C~a~N~~~ 169 (180)
T 2dru_A 131 ELKLYQGKEHLRS-LRQKTMSYQW--TNLRAPFKCKAVNRVS 169 (180)
T ss_dssp EEEEEETTEEEEE-ESSSEEEEEC--SCCSSCEEEEEEETTE
T ss_pred EEEEEECCeECcC-CCCCEEEEEE--hhcCccEEEEEecCcC
Confidence 9999999887641 1134555532 7789999999999987
No 127
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.71 E-value=2.3e-16 Score=95.65 Aligned_cols=113 Identities=17% Similarity=0.199 Sum_probs=79.3
Q ss_pred CceEEeC--CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCceEEeCCCcEEEecCCcEEEEEEec-CCCCCCc
Q psy11131 10 PRTRVLG--PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPY 86 (150)
Q Consensus 10 ~~~~~~~--~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~ 86 (150)
.|+.+.. ++|.|.+++.+|+|.|.|.+.+..+ ...+.|.|.+++. ........ ....|.|.+. .| .|
T Consensus 51 ~R~~~~~~~~sL~I~~v~~~DsG~Y~C~~~n~~~--~~~~~L~V~~~~~----~p~i~~~~-~~~~L~C~~~~~p---~p 120 (171)
T 1ccz_A 51 NRVYLDTVSGSLTIYNLTSSDEDEYEMESPNITD--TMKFFLYVLEMVS----KPMIYWEC-SNATLTCEVLEGT---DV 120 (171)
T ss_dssp TSEEECTTTCCEEECSCCGGGCEEEEEECTTCCS--CEEEEEEEECCCC----CCEEEEET-TTTEEEEECSSCS---SC
T ss_pred CcEEEeCCCCeEEECCCChhhCceEEEEEeCCCC--cEEEEEEEECcCC----CCEEEEec-CCcEEEEEeCCCC---Cc
Confidence 4666643 8999999999999999999998766 6777888876521 11111111 1137899998 78 89
Q ss_pred EEEEeecCcccCCCcceeeEEEccCCCCCCceEEEEEEeCCCCceeeeEE
Q psy11131 87 LIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAE 136 (150)
Q Consensus 87 ~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 136 (150)
.+.|++++..+.... ...+.+. ...|.|.|.|.|.|..+ ..+..+.
T Consensus 121 ~i~W~~~~~~l~~~~-~~~l~~~--~~~~~g~Y~C~a~N~~~-~~~~~~~ 166 (171)
T 1ccz_A 121 ELKLYQGKEHLRSLR-QKTMSYQ--WTNLRAPFKCKAVNRVS-QESEMEV 166 (171)
T ss_dssp EEEEEETTEEEEEES-SSEEEEE--CSCCSSCEEEEEEETTE-EEEEEEC
T ss_pred EEEEEECCEECcCCc-ceEEEEe--ccCCCceEEEEEEcccC-cccceeE
Confidence 999999987764322 2233333 36788999999999988 3444443
No 128
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.71 E-value=5.2e-17 Score=107.09 Aligned_cols=121 Identities=16% Similarity=0.263 Sum_probs=81.9
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcc-----eeEEEEEEEec---CceEEeCCCcEEEecCCcEEEEEEecCCCCCCcEE
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGE-----ATAEVRLQVST---PYRVDVNPPLLSVHLDGSANFQCEITPYDSGPYLI 88 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~-----~~~~~~l~v~~---~~~~~~~~~~~~~~~g~~~~l~C~~~~p~~~~~~~ 88 (150)
+.|.|.+++.+|+|.|+|.+.|..+. .+....|.|.. +|.+...+.. .+.+|+.+.|.|.+..| .+.+
T Consensus 174 ~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~~~~p~i~~~~~~-~v~~G~~v~L~C~~~~~---~~~~ 249 (316)
T 3vh8_G 174 ANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPYEKPSLSAQPGP-KVQAGESVTLSCSSRSS---YDMY 249 (316)
T ss_dssp EEEEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEECSSCCCEEEEESCS-CCCTTSCCEEEEEESSC---CSEE
T ss_pred EEEEECCCChhhCceEEEEEecCCCCccccCCCCCEEEEecCCCCCCeEEeCCCC-eecCCCcEEEEEECCCC---CcEE
Confidence 67999999999999999999987653 24556777763 3444443332 46789999999998866 7899
Q ss_pred EEeecCcccCCCcc---------eeeEEEccCCCCCCceEEEEEEeCCCC----ceeeeEEEEEcCcC
Q psy11131 89 AWFKDGRQIPGRTS---------STSLVINPVGREDRGIYQCIARRSDGD----VAQGSAELQLGGTR 143 (150)
Q Consensus 89 ~w~~~~~~~~~~~~---------~~~l~~~~~~~~~~g~y~C~~~~~~g~----~~~~~~~l~v~~~p 143 (150)
.|++++..+..... ...|.|.++. |.|.|.|.+.|..+. ..+..+.|.|.++|
T Consensus 250 ~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g~p 315 (316)
T 3vh8_G 250 HLSREGGAHERRLPAVRKVNRTFQADFPLGPAT--HGGTYRCFGSFRHSPYEWSDPSDPLLVSVTGNP 315 (316)
T ss_dssp EEEETTSSCCEEEECEECTTSCEEEEEECC-------CEEEEEEEBTTBTTEECCCCCCEEC------
T ss_pred EEEECCCcCCCceeceeccCCceeEEEEcCCcC--CCEEEEEEeecCCCchhccCCCCcEEEEEeCCC
Confidence 99999876542110 3678888888 999999999986542 35778888888776
No 129
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.71 E-value=3.8e-16 Score=96.87 Aligned_cols=117 Identities=15% Similarity=0.272 Sum_probs=84.0
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCC-----cceeEEEEEEEec---CceEEeCCCcEEEecCCcEEEEEEecCCCCCCcEE
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIG-----GEATAEVRLQVST---PYRVDVNPPLLSVHLDGSANFQCEITPYDSGPYLI 88 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~-----~~~~~~~~l~v~~---~~~~~~~~~~~~~~~g~~~~l~C~~~~p~~~~~~~ 88 (150)
+.|.|.+++.+|+|.|+|.+.+.. ...+..+.|.|.+ +|.+...+. ..+.+|+.+.|.|.+..+ .+.+
T Consensus 63 ~~l~I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s~~~~l~V~~~~~~p~i~~~p~-~~v~~G~~v~L~C~~~~~---~~~~ 138 (201)
T 1nkr_A 63 ANFSISRMTQDLAGTYRCYGSVTHSPYQVSAPSDPLDIVIIGLYEKPSLSAQPG-PTVLAGENVTLSCSSRSS---YDMY 138 (201)
T ss_dssp EEEEESSCCGGGCEEEEEEEEBTTBTTCCCCCCCCEEEEEECSSCCCEEEEESC-SEECTTCEEEEEEEESSC---CSEE
T ss_pred EEEEeccCCcccCeEEEEeEecCCCCccccCCCCCEEEEeeccCCCCceecCCC-CccCCCCeEEEEEeCCCC---CceE
Confidence 679999999999999999997532 1234556777774 344544443 367899999999998755 6789
Q ss_pred EEeecCcccCCCc---------ceeeEEEccCCCCCCceEEEEEEeCC----CCceeeeEEEEE
Q psy11131 89 AWFKDGRQIPGRT---------SSTSLVINPVGREDRGIYQCIARRSD----GDVAQGSAELQL 139 (150)
Q Consensus 89 ~w~~~~~~~~~~~---------~~~~l~~~~~~~~~~g~y~C~~~~~~----g~~~~~~~~l~v 139 (150)
.|++++..+.... ....|.|.++. |.|.|.|.+.+.. ....+..+.|.|
T Consensus 139 ~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--d~G~Y~C~a~~~~~~~~~s~~S~~~~l~V 200 (201)
T 1nkr_A 139 HLSREGEAHERRLPAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFHDSPYEWSKSSDPLLVSV 200 (201)
T ss_dssp EEEETTCSSCEEEECEEEETTEEEEEEEEEECC--SCEEEEEEEEETTEEEEECCCCCCEEEEE
T ss_pred EEEECCcccCcccccccccCCceEEEEEeCCcC--CCeeEEEEEEcCCCCCcCCCCCCCEEEEe
Confidence 9999987654321 14578888887 9999999998642 112345566655
No 130
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.71 E-value=2.4e-17 Score=103.24 Aligned_cols=116 Identities=18% Similarity=0.258 Sum_probs=81.4
Q ss_pred CceEEeC----CeEEEcCCCCCCCeEEEEEeccCCc-----ceeEEEEEEEec----CceEEeCCCcEEEecCCcEEEEE
Q psy11131 10 PRTRVLG----PILAIEGVTAEDSGTYRCSSSNIGG-----EATAEVRLQVST----PYRVDVNPPLLSVHLDGSANFQC 76 (150)
Q Consensus 10 ~~~~~~~----~~l~i~~~~~~d~G~Y~C~~~~~~~-----~~~~~~~l~v~~----~~~~~~~~~~~~~~~g~~~~l~C 76 (150)
.|+.+.. .+|.|.+++.+|+|.|.|.+.+..+ .....+.|.|.. +|.+...+.......|+.+.|.|
T Consensus 64 ~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~~~~v~L~C 143 (218)
T 3s96_B 64 DRFSGSSSGADRYLSISNIQPEDEAIYICGVGDTIKEQFVYVFGGGTKVTVLGQPKSTPTLTVFPPSSEELKENKATLVC 143 (218)
T ss_dssp TTEEEEEETTEEEEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCBCCEEEEECCCHHHHHTTEEEEEE
T ss_pred cceEEecCCceEEEEEccCCcccCEEEEEEEecCCCCceeEEEcCcEEEEEecCCCCCceEEeeCCCcccccCCcEEEEE
Confidence 4665532 5699999999999999999988654 233456788873 34444333323334578899999
Q ss_pred Eec--CCCCCCc-EEEEeecCcccCCCc----------c---eeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 77 EIT--PYDSGPY-LIAWFKDGRQIPGRT----------S---STSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 77 ~~~--~p~~~~~-~~~w~~~~~~~~~~~----------~---~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
.+. .| .+ .+.|++++..+.... . ...|.+.....+|.|.|+|.+.|..+
T Consensus 144 ~~~g~~p---~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~ 208 (218)
T 3s96_B 144 LISNFSP---SGVTVAWKANGTPITQGVDTSNPTKEGNKFMASSFLHLTSDQWRSHNSFTCQVTHEGD 208 (218)
T ss_dssp EEEEEBS---SCCEEEEEETTEEC--------------CEEEEEEEEEEHHHHHTCSCEEEEEEETTE
T ss_pred EECcccC---CCeEEEEEECCEECcCceecCcccccCCcEEEEEEEEEeHHHccCCCeEEEEEEeCCC
Confidence 998 46 56 899999988765411 0 23466777777789999999999876
No 131
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.71 E-value=6e-19 Score=128.07 Aligned_cols=124 Identities=23% Similarity=0.403 Sum_probs=0.0
Q ss_pred eEEEcCCCCCCCeEEEEEeccCCcce--eEEEEEEE--ecCceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEee
Q psy11131 18 ILAIEGVTAEDSGTYRCSSSNIGGEA--TAEVRLQV--STPYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFK 92 (150)
Q Consensus 18 ~l~i~~~~~~d~G~Y~C~~~~~~~~~--~~~~~l~v--~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~ 92 (150)
.|.|.++..+|+|.|+|.+.|..+.. +....|.| ..+|.+...+....+.+|+.+.|.|.+. .| .|.+.|++
T Consensus 626 ~L~i~~~~~~d~G~Y~C~a~n~~~~~~~s~~~~l~v~~~~~P~~~~~~~~~~v~~g~~~~l~C~~~g~P---~p~v~W~k 702 (772)
T 3v2a_R 626 IMELKNASLQDQGDYVCLAQDRKTKKRHCVVRQLTVLERVAPTITGNLENQTTSIGESIEVSCTASGNP---PPQIMWFK 702 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEECCCCccCCcEEEEEEEeCCCCeEEEEEEeecccccCCCEeecCCCceEEeCCCCEEEEEEeCccC---CCeEEEEE
Confidence 49999999999999999999954432 23344454 4566666555666788999999999999 89 89999999
Q ss_pred cCcccCCCcc------eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCcCcc
Q psy11131 93 DGRQIPGRTS------STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGTRNI 145 (150)
Q Consensus 93 ~~~~~~~~~~------~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p~~ 145 (150)
++..+..... ...|.|.++..+|.|.|.|.|.|..| .....+.|.|.++|..
T Consensus 703 ~g~~l~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G-~~~~~~~l~V~~~p~~ 760 (772)
T 3v2a_R 703 DNETLVEDSGIVLKDGNRNLTIRRVRKEDEGLYTCQACSVLG-CAKVEAFFIIEGAQEK 760 (772)
T ss_dssp -----------------------------------------------------------
T ss_pred CCeECcCCCCeEEcCCCcEEEECcCCHHHCEEEEEEEEeCCc-ceeEEEEEEEECCCCc
Confidence 9887654422 56899999999999999999999999 5778899999887754
No 132
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.71 E-value=1.3e-16 Score=102.58 Aligned_cols=131 Identities=21% Similarity=0.363 Sum_probs=90.4
Q ss_pred CCceEEeC------CeEEEcCCCCCCCeEEEEEeccCCc-------c--eeEEEEEEEecCc---------------eEE
Q psy11131 9 GPRTRVLG------PILAIEGVTAEDSGTYRCSSSNIGG-------E--ATAEVRLQVSTPY---------------RVD 58 (150)
Q Consensus 9 ~~~~~~~~------~~l~i~~~~~~d~G~Y~C~~~~~~~-------~--~~~~~~l~v~~~~---------------~~~ 58 (150)
+.|+.+.. .+|.|.+++.+|+|.|.|.+.+..| . ....+.|.|...+ .+.
T Consensus 64 ~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~ 143 (257)
T 1f3r_B 64 KSRLSISRDTSKNQVFLKMNSLQTDDTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLT 143 (257)
T ss_dssp STTEEEEEETTTTEEEEEEESCCTTCCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSC
T ss_pred CCcEEEEEECCCCEEEEEECCCCcccCEEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEE
Confidence 45776642 4899999999999999999998743 1 1234577887542 122
Q ss_pred eCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEee--cCcccCC------------Ccc--------eeeEEEccCCCCC
Q psy11131 59 VNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFK--DGRQIPG------------RTS--------STSLVINPVGRED 115 (150)
Q Consensus 59 ~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~--~~~~~~~------------~~~--------~~~l~~~~~~~~~ 115 (150)
..+....+.+|+.+.|.|.+. .| .+.+.|++ ++..+.. ..+ ...|.|.++..+|
T Consensus 144 ~~p~~~~v~~G~~v~L~C~~~~~~---~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 220 (257)
T 1f3r_B 144 QSPSLLSASVGDRVTLSCKGSQNI---NNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPED 220 (257)
T ss_dssp EETSEECCCTTCCEEEEEECSSCC---BTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGG
T ss_pred ccCCEEEEcCCCCEEEEEEECCcC---CCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhh
Confidence 234455678999999999998 77 78999998 4443210 011 3479999999999
Q ss_pred CceEEEEEEeCCCCceeeeEEEEEcCcC
Q psy11131 116 RGIYQCIARRSDGDVAQGSAELQLGGTR 143 (150)
Q Consensus 116 ~g~y~C~~~~~~g~~~~~~~~l~v~~~p 143 (150)
+|.|.|.+.|.. .....-..|.|...+
T Consensus 221 ~G~Y~C~a~n~~-~~~g~gt~l~V~~~~ 247 (257)
T 1f3r_B 221 VATYFCYQYNNG-YTFGAGTKLELKAAE 247 (257)
T ss_dssp CSEEEEEEESSS-EEECCCCEECCSSSC
T ss_pred CEEEEEEEeCCC-CeECCCEEEEEeCCC
Confidence 999999999864 122233455555543
No 133
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.71 E-value=3.4e-17 Score=102.23 Aligned_cols=116 Identities=24% Similarity=0.323 Sum_probs=84.8
Q ss_pred CceEEeC----CeEEEcCCCCCCCeEEEEEeccCCccee-EEEEEEEec---CceEEeCCCcEEEecCCcEEEEEEec--
Q psy11131 10 PRTRVLG----PILAIEGVTAEDSGTYRCSSSNIGGEAT-AEVRLQVST---PYRVDVNPPLLSVHLDGSANFQCEIT-- 79 (150)
Q Consensus 10 ~~~~~~~----~~l~i~~~~~~d~G~Y~C~~~~~~~~~~-~~~~l~v~~---~~~~~~~~~~~~~~~g~~~~l~C~~~-- 79 (150)
.|+.+.. .+|.|.+++.+|+|.|+|.+.+..+... ....|.|.. +|.+...+.......|+.+.|.|.+.
T Consensus 60 ~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~~~l~C~~~g~ 139 (213)
T 3d9a_L 60 SRFSGSGSGTDFTLSINSVETEDFGMYFCQQSNSWPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNF 139 (213)
T ss_dssp TTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEE
T ss_pred ccEEEEcCCCEEEEEECCCChhhCEEEEEeeecCCcceeCCCEEEEEecCCCCceeEeECCChhhcCCCcEEEEEEEeee
Confidence 5665543 3899999999999999999998765432 234677764 44544433222234688999999997
Q ss_pred CCCCCCc-EEEEeecCcccCCC-cc--------------eeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 80 PYDSGPY-LIAWFKDGRQIPGR-TS--------------STSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 80 ~p~~~~~-~~~w~~~~~~~~~~-~~--------------~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
.| .+ .+.|++++..+... .. ...|.|.++..+|.|.|.|.|.|...
T Consensus 140 ~p---~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~ 201 (213)
T 3d9a_L 140 YP---KDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTS 201 (213)
T ss_dssp BS---SCCEEEEEETTEEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTC
T ss_pred cC---CceEEEEEcCCCcCcceeeecCCCccCCCCCEEEEEEEEEeccccCCCCEEEEEEEEccC
Confidence 45 44 89999998776544 00 24899999999999999999999765
No 134
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.71 E-value=3.8e-16 Score=102.41 Aligned_cols=120 Identities=15% Similarity=0.243 Sum_probs=90.6
Q ss_pred ecCCCCceEEeC----CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEec------------CceEEeCCC-cEEEe
Q psy11131 5 LVLPGPRTRVLG----PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVST------------PYRVDVNPP-LLSVH 67 (150)
Q Consensus 5 ~~~~~~~~~~~~----~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~------------~~~~~~~~~-~~~~~ 67 (150)
++..+.|+.+.. ..|.|.+++.+|+|.|+|.+.+..|... ...+.|.. +|.+...+. ...+.
T Consensus 42 ~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~-s~~l~v~~~~~~~~~~~~~~~p~~~~~~~~~~~v~ 120 (312)
T 2y23_A 42 STEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIAS-SYLIDEEELKRLLALSHEHKFPTVPVKSELAVEIL 120 (312)
T ss_dssp ECTTCTTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSCCCCE-EEEECHHHHHHHHHHHHHHHSCBCCEEEEEEEEEC
T ss_pred ECCCCCCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCCCcEE-EEEEEEeeeeeeecccccCCCCccccccCCceEEe
Confidence 344556766654 5899999999999999999999877544 55566652 333333222 56788
Q ss_pred cCCcEEEEEEec--CCCCCCcEEEEeecCcccCCCcc----------eeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 68 LDGSANFQCEIT--PYDSGPYLIAWFKDGRQIPGRTS----------STSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 68 ~g~~~~l~C~~~--~p~~~~~~~~w~~~~~~~~~~~~----------~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
+|+.+.|.|.+. .| .+.+.|++++..+..... ...|.|.++..+|.|.|.|.+.+...
T Consensus 121 ~G~~v~l~C~~~~~~p---~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~ 190 (312)
T 2y23_A 121 EKGQVRFWMQAEKLSG---NAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKA 190 (312)
T ss_dssp SSSCEEEEEEESCCCS---SCEEEEEETTEEECSSSSCEEEEETTTTEEEEEESCCCGGGCEEEEEEEESSSC
T ss_pred eCCCEEEEEEEEeCCC---CCEEEEEECCEECeeCCcEEEEEccCCCEEEEEEccCCcccCEeEEEEEEeCCc
Confidence 999999999997 57 899999999887765432 22399999999999999999986543
No 135
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.71 E-value=2.2e-16 Score=101.63 Aligned_cols=122 Identities=16% Similarity=0.273 Sum_probs=88.6
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCC-----cceeEEEEEEEec---CceEEeCCCcEEEecCCcEEEEEEecCCCCCCcEE
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIG-----GEATAEVRLQVST---PYRVDVNPPLLSVHLDGSANFQCEITPYDSGPYLI 88 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~-----~~~~~~~~l~v~~---~~~~~~~~~~~~~~~g~~~~l~C~~~~p~~~~~~~ 88 (150)
+.|.|.+++.+|+|.|+|.+.+.. ...+..+.|.|.+ +|.+...+. ..+.+|+.+.|.|.+..+ .+.+
T Consensus 62 ~~L~I~~v~~~DsG~Y~C~a~~~~~~~~~s~~S~~~~L~V~~~~~~P~l~~~p~-~~V~~G~~vtL~C~~~~~---~~~~ 137 (257)
T 1b6u_A 62 ANFSIGPMMQDLAGTYRCYGSVTHSPYQLSAPSDPLDIVITGLYEKPSLSAQPG-PTVLAGESVTLSCSSRSS---YDMY 137 (257)
T ss_dssp EEEEECSCCTTTCEEEEEEEECSSCTTSCCCCCCCEEEEEECSSCCCEEECSSC-TTCBTTCEEEEEEECSSC---CSEE
T ss_pred EEEEeecCCcccCEEEEEeEeccCCCccccccCCCEEEecccCCCCcceEccCC-CccCCCCEEEEEEeCCCC---CcEE
Confidence 679999999999999999987532 2235567778875 344444433 246799999999998743 5689
Q ss_pred EEeecCcccCCCc---------ceeeEEEccCCCCCCceEEEEEEeCC----CCceeeeEEEEEcCcCc
Q psy11131 89 AWFKDGRQIPGRT---------SSTSLVINPVGREDRGIYQCIARRSD----GDVAQGSAELQLGGTRN 144 (150)
Q Consensus 89 ~w~~~~~~~~~~~---------~~~~l~~~~~~~~~~g~y~C~~~~~~----g~~~~~~~~l~v~~~p~ 144 (150)
.|++++..+.... ....|.|.++. |.|.|.|.+.+.. ....+..+.|.|.++|.
T Consensus 138 ~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~--D~G~Y~C~a~~~~~p~~~s~~S~pl~L~V~g~p~ 204 (257)
T 1b6u_A 138 HLSREGEAHERRFSAGPKVNGTFQADFPLGPAT--HGGTYRCFGSFRDSPYEWSNSSDPLLVSVTGNPS 204 (257)
T ss_dssp EEEETTSSCEECCBCBCCSSSCCBEEEEEEECC--SCEEEEEEEECSSCTTBBCCCCCCEEECCBCCC-
T ss_pred EEEECCcccCcccccccccCCceeEEEEecccc--cCEEEEEEEEcCCCCcccccCCCCEEEEEeccCC
Confidence 9999987653211 14678899887 9999999999642 22456778898888754
No 136
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.70 E-value=5.8e-16 Score=99.43 Aligned_cols=109 Identities=18% Similarity=0.278 Sum_probs=80.2
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcc----eeEEEEEEEec--------------------CceEEeCCCcEEEecCCcE
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGE----ATAEVRLQVST--------------------PYRVDVNPPLLSVHLDGSA 72 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~----~~~~~~l~v~~--------------------~~~~~~~~~~~~~~~g~~~ 72 (150)
.+|.|.+++.+|+|.|+|.+.+..+. ....+.|.|.. ++.+...+....+.+|+.+
T Consensus 76 ~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v 155 (256)
T 3tf7_C 76 FHLRKASVHRSDSAVYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSPRNKVTVTGENV 155 (256)
T ss_dssp EEEEESSCCGGGCSEEEEEEECTTCTTCEEECCCEEEEEEC---------------------CCEEESCSEEEEETTCCE
T ss_pred EEEEECCCCcccCEEEEEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEecCCEEEEeCCCcE
Confidence 46999999999999999999886432 22345677765 3455566777778899999
Q ss_pred EEEEEecCCCCCCcEEEEeecCcccC--------------------------CCcceeeEEEccCCCCCCceEEEEEEeC
Q psy11131 73 NFQCEITPYDSGPYLIAWFKDGRQIP--------------------------GRTSSTSLVINPVGREDRGIYQCIARRS 126 (150)
Q Consensus 73 ~l~C~~~~p~~~~~~~~w~~~~~~~~--------------------------~~~~~~~l~~~~~~~~~~g~y~C~~~~~ 126 (150)
.|.|.+... .+.+.|++...... .......|.|.++..+|+|.|.|.+.|.
T Consensus 156 ~L~C~~~~~---~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 232 (256)
T 3tf7_C 156 TLSCRQTNS---HNYMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASPSQTSLYFCASSDA 232 (256)
T ss_dssp EECEEECSC---CSEEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCGGGCEEEEEEEEEE
T ss_pred EEEEEcCCC---ceEEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCHHHCEEEEEEecCC
Confidence 999998733 56899987321100 0011347999999999999999999987
Q ss_pred CC
Q psy11131 127 DG 128 (150)
Q Consensus 127 ~g 128 (150)
.|
T Consensus 233 ~g 234 (256)
T 3tf7_C 233 PG 234 (256)
T ss_dssp TT
T ss_pred CC
Confidence 65
No 137
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.70 E-value=6.7e-17 Score=104.16 Aligned_cols=117 Identities=18% Similarity=0.220 Sum_probs=90.8
Q ss_pred CeEEEcCCCCCCCeEEEEEeccC-Cccee---EEEEEEEecCceEEeC--CCcEEEecCCcEEEEEEec-CCCCCCcEEE
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNI-GGEAT---AEVRLQVSTPYRVDVN--PPLLSVHLDGSANFQCEIT-PYDSGPYLIA 89 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~-~~~~~---~~~~l~v~~~~~~~~~--~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~ 89 (150)
+.|.|..+..+|.|.|+|.+.+. .|... ..+.|.|..+|.+... +....+.+|+.+.|.|.+. .| .+.+.
T Consensus 142 ~~l~i~~~~~~~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~~~p~~~~~~~p~~~~v~~g~~~~l~C~~~g~P---~p~i~ 218 (265)
T 2oz4_A 142 AQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWGNP---LPELK 218 (265)
T ss_dssp ECCEEECCGGGTTEEEEEEEEEECSSSEEEEEEEEEEEEEEEEECCGGGSCSEEEEETTCEECCCCCCEEES---CCEEE
T ss_pred EEEEEccccccCCceEEEEEEcCCCCCcccccccEEEEEEeCCccccccCCCccEEcCCCeEEEEeECccCC---CCeEE
Confidence 56889999999999999999753 35544 6678888877665432 4466788999999999999 99 99999
Q ss_pred EeecCcccCCCcceeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCc
Q psy11131 90 WFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGT 142 (150)
Q Consensus 90 w~~~~~~~~~~~~~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~ 142 (150)
|++++..+.... .+ ..+..+|.|.|.|.+.|..| ..+..+.|.|.++
T Consensus 219 W~~~~~~~~~~g---~~--~~v~~~d~G~Y~C~a~N~~G-~~~~~~~l~V~~p 265 (265)
T 2oz4_A 219 CLKDGTFPLPIG---ES--VTVTRDLEGTYLCRARSTQG-EVTREVTVNVLSP 265 (265)
T ss_dssp EEETTTEECCTT---SC--EECCGGGCEEEEEEEEETTE-EEEEEEEEEEECC
T ss_pred EEECCcccCCCC---cE--EEeehhhCeEEEEEEECCCC-cEEEEEEEEEecC
Confidence 999887322221 12 23777999999999999998 6788888888653
No 138
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.70 E-value=3.4e-16 Score=105.02 Aligned_cols=125 Identities=12% Similarity=0.152 Sum_probs=93.7
Q ss_pred eEEeCCeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCceEEeCCCcEEEecCCcEEEEEEec-CCCC--CCcEE
Q psy11131 12 TRVLGPILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCEIT-PYDS--GPYLI 88 (150)
Q Consensus 12 ~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~--~~~~~ 88 (150)
+......|.|.+++.+|+|.|+|.+.+..+.....+.|.|..+|... ....+.+|+.+.|.|.+. .+.. -.+.+
T Consensus 137 ~~~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~l~v~~~p~~~---~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i 213 (363)
T 1wio_A 137 NIQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKAS---SIVYKKEGEQVEFSFPLAFTVEKLTGSGEL 213 (363)
T ss_dssp EEEESSEEEECSBCGGGCEECEEEEEETTEEEEECCEECEECCSCSE---EEEEEETBCCEEEECCCCCCCCSSCEEEEE
T ss_pred ccccceEEEEeeCChhcCCEEEEEEecCCCeEEEEEEEEEecCCCCC---CceEEecCCEEEEEEEEecccccCCCceeE
Confidence 33344789999999999999999999876666666777777554322 345678899999999775 2111 05899
Q ss_pred EEeecCcccCCC--------cc------------------eeeEEEccCCCCCCceEEEEEEeC--CCCceeeeEEEEEc
Q psy11131 89 AWFKDGRQIPGR--------TS------------------STSLVINPVGREDRGIYQCIARRS--DGDVAQGSAELQLG 140 (150)
Q Consensus 89 ~w~~~~~~~~~~--------~~------------------~~~l~~~~~~~~~~g~y~C~~~~~--~g~~~~~~~~l~v~ 140 (150)
.|++++..+... .. ...|.|.++..+|.|.|.|.+.|. .| ..+..+.|.|.
T Consensus 214 ~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~g-~~~~~~~l~V~ 292 (363)
T 1wio_A 214 WWQAERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTG-KLHQEVNLVVM 292 (363)
T ss_dssp EEEESSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGGCEEEEEEECBTTTTC-CEEEEEEEEEE
T ss_pred EEecCCCCccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCcCcCcEEEEEEEEhhhcC-eEEEEEeEEEE
Confidence 999988765541 11 238999999999999999999999 88 57777777664
No 139
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.70 E-value=1e-16 Score=105.57 Aligned_cols=125 Identities=17% Similarity=0.239 Sum_probs=91.6
Q ss_pred CeEEEcCCCCCCCeEEEEEec-cCCcceeEEEEEEEecCceEEeCCCcEEEecCCcEEEEEEec--CCCCCCcEEEEeec
Q psy11131 17 PILAIEGVTAEDSGTYRCSSS-NIGGEATAEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCEIT--PYDSGPYLIAWFKD 93 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~-~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~--~p~~~~~~~~w~~~ 93 (150)
.+|.|.+++.+|+|.|+|.+. +..+..+..+.|.+...|.....+....+..++.+.+.|.+. .| .+.+.|+++
T Consensus 79 ~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~~l~v~~~P~~~~~~~~~~~~~~~~~~~~C~~~~~~P---~~~i~W~~~ 155 (313)
T 4fqp_A 79 ASLRMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQLTGEPVPMARCVSTGGRP---PAQITWHSD 155 (313)
T ss_dssp CCEEECSCCGGGCEEEEEEEECSSSCEEEEEEEECCBBCCEEEEEECCBCCCSSCEEEEEEEEEEEBS---CCEEEEEET
T ss_pred eEEEECcCChhhCEEEEEEEeeccCcceeeeeeeeeccCCcceecccceEeecCceEEEEEEccCccC---CcEEEeecC
Confidence 569999999999999999875 445667777888888777665544444556777888899876 78 899999998
Q ss_pred CcccCCCcc-----------eeeEEEccCCCCCCceEEEEEEeCCCC-ceeeeEEEEEcCcCc
Q psy11131 94 GRQIPGRTS-----------STSLVINPVGREDRGIYQCIARRSDGD-VAQGSAELQLGGTRN 144 (150)
Q Consensus 94 ~~~~~~~~~-----------~~~l~~~~~~~~~~g~y~C~~~~~~g~-~~~~~~~l~v~~~p~ 144 (150)
+..+..... .+.|.+.....+|.|.|.|.+.|..+. ....++.|.|..+|.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~ 218 (313)
T 4fqp_A 156 LGGMPNTSQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVYYPPE 218 (313)
T ss_dssp TCCEEEEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCBCEEEE
T ss_pred CccccccceeeeecccccccceeeeecccccccCeeEEEEEEccCcCccceeeeecccccCCc
Confidence 765432111 346888888889999999999997652 234455555555543
No 140
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.70 E-value=7.5e-16 Score=107.79 Aligned_cols=123 Identities=24% Similarity=0.380 Sum_probs=90.3
Q ss_pred CceEEeC----CeEEEcCCCCCCCeEEEEEeccCCcc---eeEEEEEEEe----cCceEEeCCCcEEEecCCcEEEEEEe
Q psy11131 10 PRTRVLG----PILAIEGVTAEDSGTYRCSSSNIGGE---ATAEVRLQVS----TPYRVDVNPPLLSVHLDGSANFQCEI 78 (150)
Q Consensus 10 ~~~~~~~----~~l~i~~~~~~d~G~Y~C~~~~~~~~---~~~~~~l~v~----~~~~~~~~~~~~~~~~g~~~~l~C~~ 78 (150)
.|+.... .+|.|.+++.+|+|.|+|.+.+..|. ....+.|.|. .+|.+...+......+|+.+.|.|.+
T Consensus 59 ~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~g~~v~l~C~~ 138 (523)
T 2rcj_C 59 TRFSGSKSGTSASLAISGLEAEDESDYYCASWNSSDNSYVFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLI 138 (523)
T ss_pred CcEEEecCCCEEEEEECCCChhhCEEEEEEEccCCCccccccCceEEEeccCCCcCCeEEecCCcccccCCCceEEEEEe
Confidence 5665432 47999999999999999999987543 2344677774 45555555555556789999999999
Q ss_pred c-CCCCCC--cEEEEeecCcccCCCcc--------------eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEE
Q psy11131 79 T-PYDSGP--YLIAWFKDGRQIPGRTS--------------STSLVINPVGREDRGIYQCIARRSDGDVAQGSAE 136 (150)
Q Consensus 79 ~-~p~~~~--~~~~w~~~~~~~~~~~~--------------~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~ 136 (150)
. .| + +.+.|++++..+..... .+.|.|..+..+|.|.|.|.+.|..+ ....++.
T Consensus 139 ~g~~---p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~-~~~~~~~ 209 (523)
T 2rcj_C 139 SDFY---PGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGS-TVEKTVA 209 (523)
T ss_pred cccc---CCceEEEEecCCCCCCCceEeccccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCc-cccccee
Confidence 8 55 4 39999999876643211 23689999999999999999999877 3333333
No 141
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.70 E-value=2.7e-16 Score=98.38 Aligned_cols=122 Identities=20% Similarity=0.253 Sum_probs=84.2
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcc-eeEEEEEEEecCceEEeCCCcEEEecCCcEEEEEEec--CCCCCCcEEEEeec
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGE-ATAEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCEIT--PYDSGPYLIAWFKD 93 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~--~p~~~~~~~~w~~~ 93 (150)
.+|.|.+++.+|+|.|.|.+.+..+. ......+.+..++.....+.......+..+.+.|.+. .| ++.+.|+++
T Consensus 83 ~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~P---~~~~~w~~~ 159 (225)
T 4fmk_A 83 ATLAFRGLRVEDEGNYTCEFATFPNGTRRGVTWLRVIAQPENHAEAQEVTIGPQSVAVARCVSTGGRP---PARITWISS 159 (225)
T ss_dssp CCEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECCBCCSSSCEEEEEEEEEEEBS---CCEEEEECS
T ss_pred EEEEEccCCHHHCcceEEEEEeCCCcceeeeeeeeeecCCceeecccceeecceeeeeeeeeecCCCC---CCEEEEEEC
Confidence 57999999999999999999876554 3344455555555444333333445566677777665 77 889999887
Q ss_pred CcccCCCc--------c---eeeEEEccCCCCCCceEEEEEEeCCCC-ceeeeEEEEEcC
Q psy11131 94 GRQIPGRT--------S---STSLVINPVGREDRGIYQCIARRSDGD-VAQGSAELQLGG 141 (150)
Q Consensus 94 ~~~~~~~~--------~---~~~l~~~~~~~~~~g~y~C~~~~~~g~-~~~~~~~l~v~~ 141 (150)
+..+.... . .+.|.|..+..+|.|.|+|.|.|..+. ....++.|.|++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~~~~~~v~l~V~Y 219 (225)
T 4fmk_A 160 LGGEAKDTQEPGIQAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEPILLPVTLSVRY 219 (225)
T ss_dssp SCCEEEEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCBTT
T ss_pred CccccCCcceEEecCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCCCeEEEEEEEEEEEE
Confidence 65432111 0 346999999999999999999998773 234455555554
No 142
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.70 E-value=1.1e-15 Score=96.90 Aligned_cols=116 Identities=20% Similarity=0.255 Sum_probs=83.9
Q ss_pred CCceEEeC-----CeEEEcCCCCCCCeEEEEEeccCCcc-----eeEEEEEEEecCc------------eEEeCCCcEEE
Q psy11131 9 GPRTRVLG-----PILAIEGVTAEDSGTYRCSSSNIGGE-----ATAEVRLQVSTPY------------RVDVNPPLLSV 66 (150)
Q Consensus 9 ~~~~~~~~-----~~l~i~~~~~~d~G~Y~C~~~~~~~~-----~~~~~~l~v~~~~------------~~~~~~~~~~~ 66 (150)
..|+.+.. .+|.|.+++.+|+|.|.|.+.+..+. ......|.|...+ .+...+....+
T Consensus 60 ~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p~~~~v 139 (238)
T 2p1y_A 60 PDGYKASRPSQENFSLILELATPSQTSVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSPQSLTV 139 (238)
T ss_dssp CTTCEEECCSSSBCEEEESSCCGGGCEEEEEEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEECSEEEE
T ss_pred cceEEEEccCCceEEEEEecCCcccCeeEEEEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEccCceEEE
Confidence 45666642 57999999999999999999986442 1134567776532 34445666778
Q ss_pred ecCCcEEEEEEec-CCCCCCcEEEEeecCc--ccC------------CCcc----------eeeEEEccCCCCCCceEEE
Q psy11131 67 HLDGSANFQCEIT-PYDSGPYLIAWFKDGR--QIP------------GRTS----------STSLVINPVGREDRGIYQC 121 (150)
Q Consensus 67 ~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~--~~~------------~~~~----------~~~l~~~~~~~~~~g~y~C 121 (150)
.+|+.+.|.|.+. .| .+.+.|++++. ... ...+ ...|.|.++..+|+|.|.|
T Consensus 140 ~~G~~v~L~C~~~~~p---~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 216 (238)
T 2p1y_A 140 WEGETAILNCSYENSA---FDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFC 216 (238)
T ss_dssp ETTSCEEEEEECCCTT---CCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGCEEEEE
T ss_pred eCCCeEEEEEEEecCC---CCcEEEEEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHCEEEEE
Confidence 9999999999998 88 88999998632 100 0000 2579999999999999999
Q ss_pred EEEeCC
Q psy11131 122 IARRSD 127 (150)
Q Consensus 122 ~~~~~~ 127 (150)
.+.|..
T Consensus 217 ~a~n~~ 222 (238)
T 2p1y_A 217 AAIDTN 222 (238)
T ss_dssp EEEETT
T ss_pred EEeeCC
Confidence 999873
No 143
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.69 E-value=1.6e-16 Score=107.15 Aligned_cols=133 Identities=22% Similarity=0.276 Sum_probs=96.0
Q ss_pred CCceEEeC-CeEEEcCCCCCCC-eEEEEEeccCCccee-E---EEEEEEecC-----ceE-EeCCCcEEEecCCcEEEEE
Q psy11131 9 GPRTRVLG-PILAIEGVTAEDS-GTYRCSSSNIGGEAT-A---EVRLQVSTP-----YRV-DVNPPLLSVHLDGSANFQC 76 (150)
Q Consensus 9 ~~~~~~~~-~~l~i~~~~~~d~-G~Y~C~~~~~~~~~~-~---~~~l~v~~~-----~~~-~~~~~~~~~~~g~~~~l~C 76 (150)
+.++.+.. ++|.|.+++.+|. |.|+|.+.+..+... . ...|.|..+ |.. ........+.+|+.+.|.|
T Consensus 155 ~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C 234 (388)
T 2v5m_A 155 DGKYLVLPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALVQKPLELMVAHTISLLC 234 (388)
T ss_dssp TTTEEECTTSCEEESSCCGGGGGCCEEEEEEETTTCCEEECSSCBCEEEECCCSCEEEECCSSCCCCEEEETTSCEEECC
T ss_pred CCcEEEccCCcEEEecCCccccCeeEEEEeccCCCCceeeccccceEEEecCCcCCCCcCccccCCceEEeeCCcEEEEE
Confidence 34555544 7899999999999 999999988643322 1 134566543 111 1122345678999999999
Q ss_pred Eec-CCCCCCcEEEEeecCcccCC------Ccc----eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCcCcc
Q psy11131 77 EIT-PYDSGPYLIAWFKDGRQIPG------RTS----STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGTRNI 145 (150)
Q Consensus 77 ~~~-~p~~~~~~~~w~~~~~~~~~------~~~----~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p~~ 145 (150)
.+. .| .+.+.|++++..+.. ... ...|.|.++..+|.|.|.|.+.|..| ..+..+.|.|..+|..
T Consensus 235 ~~~g~p---~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g-~~~~~~~l~V~~~p~~ 310 (388)
T 2v5m_A 235 PAQGFP---APSFRWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVG-GESVETVLTVTAPLSA 310 (388)
T ss_dssp CCEEES---CCEEEEEEECTTSSCEEECCCSSSEEEETTEEEESSCCGGGCEEEEEEEECSSC-EEEEEEEEEEEEEEEE
T ss_pred ECCCCC---CCEEEEEecCCCCcccccccccCceecccCEEEECcCCHHHCeEEEEEEecCCC-ceeEEEEEEEeCCCcc
Confidence 998 88 899999997543221 111 45899999999999999999999999 5777888888776543
No 144
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.69 E-value=2.6e-16 Score=104.38 Aligned_cols=128 Identities=20% Similarity=0.265 Sum_probs=90.0
Q ss_pred EeCCeEEEcCCCCCCCe-EEEEEeccCCcceeEEEEEEEe-cCceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEE
Q psy11131 14 VLGPILAIEGVTAEDSG-TYRCSSSNIGGEATAEVRLQVS-TPYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAW 90 (150)
Q Consensus 14 ~~~~~l~i~~~~~~d~G-~Y~C~~~~~~~~~~~~~~l~v~-~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w 90 (150)
...++|.|.+++.+|+| .|+|.+.+..|.......+.|. .++.....+....+.+|+.+.|.|.+. .|. .+.+.|
T Consensus 86 ~~~~~L~i~~v~~~D~Gs~Y~C~a~n~~g~~~~~~~~~v~~~~p~~~~~~~~~~~~~G~~v~L~C~~~g~p~--~~~i~W 163 (329)
T 3oq3_B 86 VKNGDLWIANYTSNDSHRRYLCTVTTKNGDCVQGIVRSHIRKPPSCIPETYELGTHDKYGIDLYCGILYAKH--YNNITW 163 (329)
T ss_dssp EETTEEEESSCCGGGGGCCEEEEEECTTSCEEEEEEEEEECCCCSCEEEEEETTSSTTTCEEEECCCCSCCC--CCEEEE
T ss_pred eecceEEEcCCChHhCCCcEEEEEEeCCCceeeEEEEEEEcCCCcEeccccceEEeCCCcEEEEeccCCCCC--CceEEE
Confidence 34589999999999999 9999999987664444333443 333222111112245699999999887 542 589999
Q ss_pred eecCcccCCCcc-----eeeEEEccCCCCCCceEEEEEEeC--CCC---ceeeeEEEEEcCcC
Q psy11131 91 FKDGRQIPGRTS-----STSLVINPVGREDRGIYQCIARRS--DGD---VAQGSAELQLGGTR 143 (150)
Q Consensus 91 ~~~~~~~~~~~~-----~~~l~~~~~~~~~~g~y~C~~~~~--~g~---~~~~~~~l~v~~~p 143 (150)
++++..+..... ...|.|.++..+|.|.|.|.+.|. .|. ..+..+.|.|..+|
T Consensus 164 ~k~~~~l~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~ 226 (329)
T 3oq3_B 164 YKNNQELIIDGTKYSQSGQNLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQ 226 (329)
T ss_dssp EETTEECCCSSSSEEEETTEEEECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCC
T ss_pred EECCccCCCCCceEecCCCEEEEeecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEECCC
Confidence 999887743222 468999999999999999999987 542 12334777777665
No 145
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.69 E-value=5.9e-16 Score=108.68 Aligned_cols=115 Identities=17% Similarity=0.108 Sum_probs=79.0
Q ss_pred CCeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecC
Q psy11131 16 GPILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDG 94 (150)
Q Consensus 16 ~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~ 94 (150)
...|.|.+++.+|+|.|+|.+.|..|.....+.|.|..+|.+...+. + ..|.|.+. .| .|.+.|++++
T Consensus 377 ~~~L~I~~v~~~D~G~YtC~A~N~~g~~~~~~~L~V~~~P~i~~~~~------~--~~l~C~a~g~P---~p~i~W~~~~ 445 (527)
T 3qs9_E 377 GYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRRKPQVLAEAS------A--SQASCFSDGYP---LPSWTWKKCS 445 (527)
T ss_dssp SSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC--CCCEEEECCC------C--E---EEEECSS---CCEEEEECCC
T ss_pred CcEEEEecCCcccCEEEEEEEEeCCCcEEEEEEEEEecCCeEEEeCC------C--CEEEEEEEEEc---CCeEEEEECC
Confidence 36899999999999999999999999988899999998887765542 2 35699999 99 8999998765
Q ss_pred cccCC-------------------CcceeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCc
Q psy11131 95 RQIPG-------------------RTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGT 142 (150)
Q Consensus 95 ~~~~~-------------------~~~~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~ 142 (150)
..... ........+.....+|.|.|.|.|.|..| .....+.|.|.++
T Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~d~G~Y~C~A~N~~G-~~~~~~~L~V~~p 511 (527)
T 3qs9_E 446 DKSPNCTEEITEGVWNRKANRKVFGQWVSSSTLNMSEAIKGFLVKCCAYNSLG-TSCETILLNSPGP 511 (527)
T ss_dssp -----CCCCCCCCEEEC---------CEEEEECCCCCSSCSCEEEEEEECSSC-EEEEEEEC-----
T ss_pred CCcCCCccccccccceeccccccCCceEEEEEEEEEEcCCCEEEEEEEEeCCC-CceeEEEEecCCC
Confidence 43210 00022333444445799999999999999 6778888876654
No 146
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.69 E-value=1.7e-16 Score=98.97 Aligned_cols=116 Identities=23% Similarity=0.344 Sum_probs=83.6
Q ss_pred CceEEeC----CeEEEcCCCCCCCeEEEEEeccCCccee-EEEEEEEec---CceEEeCCCcEEEecCCcEEEEEEec--
Q psy11131 10 PRTRVLG----PILAIEGVTAEDSGTYRCSSSNIGGEAT-AEVRLQVST---PYRVDVNPPLLSVHLDGSANFQCEIT-- 79 (150)
Q Consensus 10 ~~~~~~~----~~l~i~~~~~~d~G~Y~C~~~~~~~~~~-~~~~l~v~~---~~~~~~~~~~~~~~~g~~~~l~C~~~-- 79 (150)
.|+.+.. .+|.|.+++.+|+|.|.|.+.+..+... ....|.|.. +|.+...+.......|+.+.|.|.+.
T Consensus 59 ~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~ 138 (210)
T 1lk3_L 59 ARFSGSGSGTDFTLTIDPVEADDTAIYFCQQSWNGPLTFGAGTKLELKRADAAPTVSIFPPSTEQLATGGASVVCLMNNF 138 (210)
T ss_dssp TTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEE
T ss_pred ccEEEEecCCEEEEEECCCCHHHCeEEEEEEEcCCCceeCCCEEEEEcCCCcCCeEEEECCchhhccCCcEEEEEEEEeE
Confidence 5665542 3899999999999999999998755432 234677764 34444333222234788999999997
Q ss_pred CCCCCC-cEEEEeecCcccCCC-c--------c------eeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 80 PYDSGP-YLIAWFKDGRQIPGR-T--------S------STSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 80 ~p~~~~-~~~~w~~~~~~~~~~-~--------~------~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
.| . ..+.|++++..+... . . .+.|.|..+..+|.|.|.|.+.|...
T Consensus 139 ~p---~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~ 200 (210)
T 1lk3_L 139 YP---RDISVKWKIDGTERRDGVLDSVTDQDSKDSTYSMSSTLSLTKADYESHNLYTCEVVHKTS 200 (210)
T ss_dssp BS---SCCEEEEEETTEECCTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTC
T ss_pred eC---CceEEEEEeCCccCCCCceEccCCccCCCCCEEEEEEEEEChHHhccCCcEEEEEEecCC
Confidence 44 4 389999998876543 0 0 23688999989999999999998765
No 147
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.69 E-value=2.9e-16 Score=99.22 Aligned_cols=131 Identities=12% Similarity=0.117 Sum_probs=83.4
Q ss_pred CCceEEeC------CeEEEcCCCCCCCeEEEEEeccCCcc-eeEEEEEEEec----CceEEeCCCcEEEecCCcEEEEEE
Q psy11131 9 GPRTRVLG------PILAIEGVTAEDSGTYRCSSSNIGGE-ATAEVRLQVST----PYRVDVNPPLLSVHLDGSANFQCE 77 (150)
Q Consensus 9 ~~~~~~~~------~~l~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~~l~v~~----~~~~~~~~~~~~~~~g~~~~l~C~ 77 (150)
+.|+.+.. .+|.|.+++.+|+|.|.|.+.+..+. ....+.|.|.. +|.+........+.+|+.+.|.|.
T Consensus 65 ~~R~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~ 144 (227)
T 1mju_H 65 KNKATLTVDTSSSTAYMQLSSLTSDDSAVYYCANKLGWFPYWGQGTLVTVSAAKTTAPSVYPLAPVCGDTSGSSVTLGCL 144 (227)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEECSSCCBCCEEEEECCCC------CEEEEEE
T ss_pred CCcEEEEEeCCCCeEEEEECCCCcccCEEEEEEECCCCceEEcCcEEEEEcCCCCCCCEEEEecCCccccCCCcEEEEEE
Confidence 36776642 58999999999999999999875321 12345778874 233332222223567999999999
Q ss_pred ec--CCCCCCc-EEEEeecCcccCCC--------cc---eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCcC
Q psy11131 78 IT--PYDSGPY-LIAWFKDGRQIPGR--------TS---STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGTR 143 (150)
Q Consensus 78 ~~--~p~~~~~-~~~w~~~~~~~~~~--------~~---~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p 143 (150)
+. .| .+ .+.|++++..+... .. .+.|.|.....+| |.|+|.+.|..+ .......+.+..+|
T Consensus 145 ~~g~~P---~p~~v~W~~~g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~-~~~~~~~~~~~~~p 219 (227)
T 1mju_H 145 VKGYFP---EPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPAS-STKVDKKIEPRGPT 219 (227)
T ss_dssp EEEEBS---SCCEEEEGGGTBCTTEEECCCEEETTEEEEEEEEEECTTTTTT-SCCEEEEEEGGG-TEEEEEECCCCCC-
T ss_pred eecEeC---CCeEEEEecCCCcCCcEECCceecCCeEEEEEEEEEchhhcCC-CeEEEEEEECCC-CcceEEEeCCCCCC
Confidence 98 47 66 99999987654210 11 3467888877777 999999999765 34455555555554
Q ss_pred c
Q psy11131 144 N 144 (150)
Q Consensus 144 ~ 144 (150)
+
T Consensus 220 ~ 220 (227)
T 1mju_H 220 I 220 (227)
T ss_dssp -
T ss_pred C
Confidence 3
No 148
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.69 E-value=7.8e-16 Score=104.02 Aligned_cols=132 Identities=18% Similarity=0.209 Sum_probs=98.0
Q ss_pred CCceEEeC-CeEEEcCCCCCCCe---EEEEEeccCCcceeEEEEEEEe---c----------CceEEeCCCcEEEecCCc
Q psy11131 9 GPRTRVLG-PILAIEGVTAEDSG---TYRCSSSNIGGEATAEVRLQVS---T----------PYRVDVNPPLLSVHLDGS 71 (150)
Q Consensus 9 ~~~~~~~~-~~l~i~~~~~~d~G---~Y~C~~~~~~~~~~~~~~l~v~---~----------~~~~~~~~~~~~~~~g~~ 71 (150)
+.++.... ++|.|.+++..|+| .|+|.+.+..+........... . .|.+ .+....+.+|+.
T Consensus 152 ~~~~~~~~~~~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~G~~ 229 (395)
T 1bih_A 152 DRRITAGPDGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQY--VSKDMMAKAGDV 229 (395)
T ss_dssp CTTEEECTTSCEEEEEECGGGCCSSEEEEEEEECTTCSSCEEEEEEEECCCBCCSSCCCCCCEEEE--ECCSEEEETTSC
T ss_pred cccEEEcCCCcEEEEEEeeccCCCceEEEEEEEecccceEEEeeeEEecccccccccccCCcCcee--cCCceEEECCCc
Confidence 45555544 78999999999999 9999999987664333222111 1 1111 245567889999
Q ss_pred EEEEEEec-CCCCCCcEEEEeecCcccCCCcc----------eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEc
Q psy11131 72 ANFQCEIT-PYDSGPYLIAWFKDGRQIPGRTS----------STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLG 140 (150)
Q Consensus 72 ~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~~----------~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~ 140 (150)
+.|.|.+. .| .+.+.|++++..+..... ...|.|.++..+|.|.|.|.+.|..|......+.|.|.
T Consensus 230 v~l~C~~~g~p---~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~V~ 306 (395)
T 1bih_A 230 TMIYCMYGSNP---MGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVV 306 (395)
T ss_dssp EEEEEEEECSS---CCCCEEEETTEECCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEECCSSSSCEEEEEEEEEE
T ss_pred EEEEEEeccCC---CCeEEEEECCEEcCCCCceeEEEEecCCCceEEEccCChhhCEEEEEEEEeCCCCceEEEEEEEEE
Confidence 99999999 88 889999999877653321 23799999999999999999999988544457888887
Q ss_pred CcCcc
Q psy11131 141 GTRNI 145 (150)
Q Consensus 141 ~~p~~ 145 (150)
.+|..
T Consensus 307 ~~P~~ 311 (395)
T 1bih_A 307 SAPKY 311 (395)
T ss_dssp EEEEE
T ss_pred cCCcc
Confidence 76543
No 149
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.69 E-value=2.2e-16 Score=98.59 Aligned_cols=113 Identities=19% Similarity=0.289 Sum_probs=82.9
Q ss_pred CCceEEeC----CeEEEcCCCCCCCeEEEEEeccCCc---ceeEEEEEEEe---cCceEEeCCCcEEEecCCcEEEEEEe
Q psy11131 9 GPRTRVLG----PILAIEGVTAEDSGTYRCSSSNIGG---EATAEVRLQVS---TPYRVDVNPPLLSVHLDGSANFQCEI 78 (150)
Q Consensus 9 ~~~~~~~~----~~l~i~~~~~~d~G~Y~C~~~~~~~---~~~~~~~l~v~---~~~~~~~~~~~~~~~~g~~~~l~C~~ 78 (150)
+.|+.+.. .+|.|.+++.+|+|.|+|.+.+..+ .......|.|. .+|.+...+....+.+|+.+.|.|.+
T Consensus 59 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~ 138 (213)
T 3nl4_L 59 PSRFKGSGSGTDFTLTISDLECADAATYYCQSTYENPTYVSFGGGTEVGVKGDPVAPTVLIFPPSADLVATGTVTIVCVA 138 (213)
T ss_dssp CTTEEEEEETTEEEEEECSCCGGGCEEEEEEECCSSTTTCEECCCEEEEEECCCBCCEEEEECCCHHHHTTSEEEEEEEE
T ss_pred CccEEEecCCCEEEEEECCCChHHCEEEEEecCCCCceeEEeCCCeEEEEeCCCcCCeEEEeCCchhhccCCcEeEEEEE
Confidence 35666543 3799999999999999999998655 23344566664 33444333332334568899999999
Q ss_pred c--CCCCCCcEEEEeecCcccCCCc-----------c----eeeEEEccCCCCCCceEEEEEE
Q psy11131 79 T--PYDSGPYLIAWFKDGRQIPGRT-----------S----STSLVINPVGREDRGIYQCIAR 124 (150)
Q Consensus 79 ~--~p~~~~~~~~w~~~~~~~~~~~-----------~----~~~l~~~~~~~~~~g~y~C~~~ 124 (150)
. .| .+.+.|++++..+.... . .+.|.+..+..+|.|.|.|.+.
T Consensus 139 ~g~~P---~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 139 NKYFP---DVTVTWEVDGTTQTTGIENSKTPQNSADCTYNLSSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp EEEBS---CCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred ecccC---CcEEEEEeCCccCCCCeecccCcccCCCCeEEEEEEEEecHHHcCCCCeEEEEEE
Confidence 8 67 89999999988765321 0 3568899999999999999999
No 150
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.69 E-value=3.8e-16 Score=107.03 Aligned_cols=123 Identities=11% Similarity=0.072 Sum_probs=79.8
Q ss_pred eEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcc
Q psy11131 18 ILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQ 96 (150)
Q Consensus 18 ~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~ 96 (150)
+|.|.+++.+|+|.|+|.+.|..|.....+.|.|..+|.+... .......|+.+.|.|.+. .| .|.+.|++++..
T Consensus 104 sL~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~~~-~p~~~~~~~~~~L~C~a~G~P---~P~i~W~k~~~~ 179 (423)
T 3qs7_E 104 SMVILKMTETQAGEYLLFIQSEATNYTILFTVSIRNTLLYTLR-RPYFRKMENQDALVCISESVP---EPIVEWVLCDSQ 179 (423)
T ss_dssp EEEESSCCSSSCSEEEEEEEC--CEEEEEEEEEEC-----CEE-EEEEEECSSSSCEEEEEEESS---CCEEEEEEC---
T ss_pred EEEEeecCcccCEEEEEEEEcCCCcEEEEEEEEEecCcccccc-CCcEeccCCceEEEEEEeeec---CCeEEEEECCCC
Confidence 6999999999999999999999888888888888865543211 112345677888999999 99 999999998764
Q ss_pred cCCCcc---eeeEEEcc-CCCCCCceEEEEEEeCCCCceeeeEEEEEcCcCc
Q psy11131 97 IPGRTS---STSLVINP-VGREDRGIYQCIARRSDGDVAQGSAELQLGGTRN 144 (150)
Q Consensus 97 ~~~~~~---~~~l~~~~-~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p~ 144 (150)
+..... ........ +...|.|.|.|.|.|..|......+.|.|..+|.
T Consensus 180 ~~~~~~~~~~~~~~~~~~l~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~~~p~ 231 (423)
T 3qs7_E 180 GESCKEESPAVVKKEEKVLHELFGTDIRCCARNELGRECTRLFTIDLNQTPQ 231 (423)
T ss_dssp ----------CEEECCSEECCCCSSCEEEEEECSSCEEEEECEEEESSSCCC
T ss_pred CccccccccccccccceEEecccCeEEEEEEEcCCCCcceeeEEEEEecCCc
Confidence 422111 11111111 2567899999999999985444457777765543
No 151
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.68 E-value=2.8e-16 Score=98.38 Aligned_cols=117 Identities=19% Similarity=0.271 Sum_probs=82.4
Q ss_pred CCceEEeC----CeEEEcCCCCCCCeEEEEEeccCCc--ceeEEEEEEEec---CceEEeCCCcEEEecCCcEEEEEEec
Q psy11131 9 GPRTRVLG----PILAIEGVTAEDSGTYRCSSSNIGG--EATAEVRLQVST---PYRVDVNPPLLSVHLDGSANFQCEIT 79 (150)
Q Consensus 9 ~~~~~~~~----~~l~i~~~~~~d~G~Y~C~~~~~~~--~~~~~~~l~v~~---~~~~~~~~~~~~~~~g~~~~l~C~~~ 79 (150)
..|+.+.. .+|.|.+++.+|+|.|.|.+.+..+ .......|.|.. +|.+...+.......|+.+.|.|.+.
T Consensus 60 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~ 139 (216)
T 2xzc_L 60 PDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLNPVFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLN 139 (216)
T ss_dssp CTTEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCEEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEE
T ss_pred CCceEEeccCCEEEEEECCCCcccCEEEEEEEEeCCCcceECCCEEEEEcCCCCCCceEEeCCChhhccCCcEEEEEEEE
Confidence 34666542 4799999999999999999998765 222345677753 34444322211123588999999998
Q ss_pred --CCCCCCc-EEEEeecCcccCCC--c-------c------eeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 80 --PYDSGPY-LIAWFKDGRQIPGR--T-------S------STSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 80 --~p~~~~~-~~~w~~~~~~~~~~--~-------~------~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
.| .+ .+.|++++..+... . . .+.|.|.....+|.|.|.|.+.|...
T Consensus 140 g~~P---~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~ 203 (216)
T 2xzc_L 140 NFYP---REAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGL 203 (216)
T ss_dssp EEBS---SCCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTC
T ss_pred eEcC---CceEEEEEECCeecCCCeeEecCcccCCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCC
Confidence 45 44 89999998776543 0 0 23688888888999999999999765
No 152
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.68 E-value=1.1e-17 Score=110.03 Aligned_cols=129 Identities=16% Similarity=0.130 Sum_probs=87.0
Q ss_pred CCCCceEEeC--CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCceEEe---------CCCcEEEecCCcEEEE
Q psy11131 7 LPGPRTRVLG--PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVDV---------NPPLLSVHLDGSANFQ 75 (150)
Q Consensus 7 ~~~~~~~~~~--~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~---------~~~~~~~~~g~~~~l~ 75 (150)
..+.++.+.. ..|.|.+++.+|+|.|+|.+.+..+.....+.|.|...+.+.. ..............+.
T Consensus 49 ~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~l~ 128 (317)
T 2y25_A 49 SVDEKHDFKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVDEAFKELMMEVCKKIALSATDLKIQSTAEGIQLY 128 (317)
T ss_dssp CCSCC-----CCEEEEETTCCSTTCSCEEEEEESSSCEEEEEECCSTHHHHHHHHHHHHHHHTCBCCCEEEECSSEEEEE
T ss_pred CCCCcEEEECCeEEEEEccCCcccCeEEEEEEECCCCcEEEEEEEEEecCccccccCCceecccCCCeEEEeeccccEEE
Confidence 3344544433 5899999999999999999999888776666666554322111 1111222334445666
Q ss_pred EEec--CCCCCCcEEEEeecCcccCCCcc--------eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEE
Q psy11131 76 CEIT--PYDSGPYLIAWFKDGRQIPGRTS--------STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQL 139 (150)
Q Consensus 76 C~~~--~p~~~~~~~~w~~~~~~~~~~~~--------~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v 139 (150)
|.+. .| .+.+.|++++..+..... ...|.|.++..+|.|.|.|.+.|..| .....+.+.+
T Consensus 129 c~~~~~~p---~~~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g-~~~~~~~l~v 198 (317)
T 2y25_A 129 SFVTYYVE---DLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKT-GHQKTVDLSG 198 (317)
T ss_dssp EEBSSCCS---SCEEEEEESSSBCCCCSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSC-EEEEEEEECH
T ss_pred EEeccCCC---CcEEEEEECCEECCCCCCeEEeccCCEEEEEECcCCcccCeeEEEEEEeCCc-eEEEEEEEee
Confidence 6665 46 899999999887765433 24599999999999999999999888 4556666554
No 153
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.68 E-value=2.3e-16 Score=99.16 Aligned_cols=115 Identities=18% Similarity=0.190 Sum_probs=81.9
Q ss_pred CceEEeC------CeEEEcCCCCCCCeEEEEEeccCCc-----ceeEEEEEEEec----CceEEeCCCcEEEecCCcEEE
Q psy11131 10 PRTRVLG------PILAIEGVTAEDSGTYRCSSSNIGG-----EATAEVRLQVST----PYRVDVNPPLLSVHLDGSANF 74 (150)
Q Consensus 10 ~~~~~~~------~~l~i~~~~~~d~G~Y~C~~~~~~~-----~~~~~~~l~v~~----~~~~~~~~~~~~~~~g~~~~l 74 (150)
.|+.+.. .+|.|.+++.+|+|.|.|.+.+..+ .....+.|.|.. +|.+...+....+.+|+.+.|
T Consensus 68 ~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L 147 (222)
T 1q9r_B 68 GRFTISRDNSQSILYLQMNTLRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTL 147 (222)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSCCBCCEEEEECCCSCCCCSSEEEE
T ss_pred CceEEEEECCCCeEEEEECcCCcccCeEEEEEEeccCCcccceEeCCceEEEeccCCCCCCeEEEccccccccCCCcEEE
Confidence 5666652 4899999999999999999988643 222345677764 233332222222457999999
Q ss_pred EEEec-C-CCCCCc-EEEEeecCcccCCCc--------c---eeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 75 QCEIT-P-YDSGPY-LIAWFKDGRQIPGRT--------S---STSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 75 ~C~~~-~-p~~~~~-~~~w~~~~~~~~~~~--------~---~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
.|.+. . | .| .+.|++++..+.... . .+.|.|......| |.|.|.+.|..|
T Consensus 148 ~C~~~g~~P---~p~~v~W~~~g~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~ 211 (222)
T 1q9r_B 148 GCLVKGYFP---EPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPAS 211 (222)
T ss_dssp EEEEEEEBS---SCCEEEEGGGTBCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGG
T ss_pred EEEEccEEC---CCCEEEEecCCeEcceEeccccccCCcEEEEEEEEECchhcCC-CeEEEEEEccCC
Confidence 99998 4 8 77 999999886543210 1 3467888888888 999999999887
No 154
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.68 E-value=9e-16 Score=85.12 Aligned_cols=84 Identities=20% Similarity=0.381 Sum_probs=69.8
Q ss_pred CceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCcc----------eeeEEEccCCCCCCceEEEE
Q psy11131 54 PYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRTS----------STSLVINPVGREDRGIYQCI 122 (150)
Q Consensus 54 ~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~~----------~~~l~~~~~~~~~~g~y~C~ 122 (150)
+|.+...+....+.+|+.+.|.|.+. .| .|.+.|++++..+..... ...|.|.++..+|.|.|.|.
T Consensus 5 PP~i~~~p~~~~v~~G~~~~l~C~~~g~P---~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~ 81 (100)
T 3knb_A 5 PPKIEALPSDISIDEGKVLTVACAFTGEP---TPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLS 81 (100)
T ss_dssp EEEECCCCSEEEEETTSEEEEEEEEEEES---CCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEE
T ss_pred CCEEEeCCCcEEEeCCCeEEEEEEEEEec---CCEEEEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEEE
Confidence 34555566778899999999999999 99 999999999987754331 35799999999999999999
Q ss_pred EEeCCCCceeeeEEEEEcC
Q psy11131 123 ARRSDGDVAQGSAELQLGG 141 (150)
Q Consensus 123 ~~~~~g~~~~~~~~l~v~~ 141 (150)
+.|..| ..+..+.|.|+.
T Consensus 82 a~N~~G-~~~~~~~l~V~~ 99 (100)
T 3knb_A 82 LGNEFG-SDSATVNIHIRS 99 (100)
T ss_dssp EEETTE-EEEEEEEEEEEC
T ss_pred EEECCC-EEEEEEEEEEEE
Confidence 999999 577888888754
No 155
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.68 E-value=3.1e-16 Score=98.38 Aligned_cols=116 Identities=16% Similarity=0.142 Sum_probs=79.6
Q ss_pred CCceEEeC------CeEEEcCCCCCCCeEEEEEeccCCc----ceeEEEEEEEecC----ceEEeCCCcEEEecCCcEEE
Q psy11131 9 GPRTRVLG------PILAIEGVTAEDSGTYRCSSSNIGG----EATAEVRLQVSTP----YRVDVNPPLLSVHLDGSANF 74 (150)
Q Consensus 9 ~~~~~~~~------~~l~i~~~~~~d~G~Y~C~~~~~~~----~~~~~~~l~v~~~----~~~~~~~~~~~~~~g~~~~l 74 (150)
..|+.+.. .+|.|.+++.+|+|.|.|.+.+..+ .....+.|.|... |.+...+....+.+|+.+.|
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L 144 (219)
T 1c1e_H 65 KGRFAFFLETSATTAYLQINNLKNEDMATYFCARGTTIVRAMDYWGQGTSLTVSSAKTTPPSVYPLAPGSAAQTNSMVTL 144 (219)
T ss_dssp CSSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEETTTTEEEEECCCEEEEECCCCCBCCEEEEECCCSSSCCSSEEEE
T ss_pred CCcEEEEEecCCCEEEEEECCCCcccCEEEEEEEeccCcccceeecCceEEEEecCCCCCCeEEEecCccccccCCeEEE
Confidence 35666642 5899999999999999999998652 1223467777652 33332222223457999999
Q ss_pred EEEec--CCCCCCc-EEEEeecCcccCCC--------cc---eeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 75 QCEIT--PYDSGPY-LIAWFKDGRQIPGR--------TS---STSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 75 ~C~~~--~p~~~~~-~~~w~~~~~~~~~~--------~~---~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
.|.+. .| .| .+.|++++..+... .. .+.|.|.. ...|.|.|+|.|.|..+
T Consensus 145 ~C~~~g~~P---~p~~v~W~~~g~~~~~~~~~~~~~~~~~~~~s~L~i~~-~~~d~g~Y~C~a~n~~~ 208 (219)
T 1c1e_H 145 GCLVKGYFP---EPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPS-SPRPSETVTCNVAHPAS 208 (219)
T ss_dssp EEEEEEEBS---SCCEEEEGGGTBCTTEEECCCEESSSCEEEEEEEEEES-SSTTTSCCEEEEEEGGG
T ss_pred EEEcccccC---CCeEEEEEeCCcccceEecCCcccCCeEEEEEEEEEec-ccCCCCEEEEEEEeCCC
Confidence 99998 67 77 99999988653210 10 24577744 34466999999999876
No 156
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.67 E-value=3.6e-16 Score=97.58 Aligned_cols=117 Identities=22% Similarity=0.309 Sum_probs=81.1
Q ss_pred CceEEeC----CeEEEcCCCCCCCeEEEEEeccCCcce-eEEEEEEEe----cCceEEeCCCcEEEecCCcEEEEEEec-
Q psy11131 10 PRTRVLG----PILAIEGVTAEDSGTYRCSSSNIGGEA-TAEVRLQVS----TPYRVDVNPPLLSVHLDGSANFQCEIT- 79 (150)
Q Consensus 10 ~~~~~~~----~~l~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~v~----~~~~~~~~~~~~~~~~g~~~~l~C~~~- 79 (150)
.|+.+.. .+|.|.+++.+|+|.|.|.+.+..+.. .....|.|. .+|.+...+.......|+.+.|.|.+.
T Consensus 62 ~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g 141 (212)
T 1q0x_L 62 ARFSGSLIGDKAALTITGAQTEDEAIYFCALWSNNKLVFGGGTKLTVLGQPKSSPTVTLFPPSSEELSTAKATLVCTITD 141 (212)
T ss_dssp TTEEEEEETTEEEEEESSCCGGGCEEEEEEEECSSCEEECCCEEEEECCSCCBCCEEEEECCCHHHHTTTEEEEEEEEEE
T ss_pred ccEEEEeeCCEEEEEECCCCccCCEEEEEEEecCchhhcCCCeEEEEecCCCCCCeeEEeCCCHHHccCCcEEEEEEEEE
Confidence 5665543 389999999999999999999875432 233566674 334443322222234688999999998
Q ss_pred CCCCCCc-EEEEeecCcccCCCcc--------------eeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 80 PYDSGPY-LIAWFKDGRQIPGRTS--------------STSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 80 ~p~~~~~-~~~w~~~~~~~~~~~~--------------~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
.+. .+ .+.|++++..+..... ...|.|.....+|.|.|.|.|.|...
T Consensus 142 ~~p--~~~~v~W~k~g~~l~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~ 203 (212)
T 1q0x_L 142 FYP--GVVTVDWKVDGTPVTAGMETTQPSKQSNNKYMASSYLTLTARAWERHSSYSCQVTHEGH 203 (212)
T ss_dssp EBS--SCCEEEEEETTEEECTTEEECCCEECTTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTE
T ss_pred EeC--CCeEEEEEECCEeCCCCeecCCceeCCCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCc
Confidence 430 33 8999999876643210 23677888888899999999998765
No 157
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.67 E-value=1.2e-16 Score=99.47 Aligned_cols=116 Identities=16% Similarity=0.214 Sum_probs=80.5
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEe---------------------------c----CceEEeCCCcEE
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVS---------------------------T----PYRVDVNPPLLS 65 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~---------------------------~----~~~~~~~~~~~~ 65 (150)
++|.|.+++.+|+|.|+|.+.+.. . ..+.|.|. . ++.+...+. ..
T Consensus 49 ~~L~i~~v~~~DsG~Y~C~~~~~~-s--~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~v 124 (204)
T 1sy6_A 49 KKWNLGSNAKDPRGMYQCKGSQNK-S--KPLQVYYRMGSADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQTPY-KV 124 (204)
T ss_dssp CCEEEEEGGGCCEEEEEEESSSSC-C--CCEEEEEEC------------------------------------CCCC-EE
T ss_pred CeEEeCCCCcCCCEEEEEEecCCC-C--eeEEEEEEEeccccccccccccccccccccccccccccccccceecCCc-ee
Confidence 679999999999999999976532 2 22334443 0 111111222 22
Q ss_pred EecCCcEEEEEEecCCCCCCcEEEEeecCcccCCCc-------ceeeEEEccC-CCCCCceEEEEEEeCCCCceeeeEEE
Q psy11131 66 VHLDGSANFQCEITPYDSGPYLIAWFKDGRQIPGRT-------SSTSLVINPV-GREDRGIYQCIARRSDGDVAQGSAEL 137 (150)
Q Consensus 66 ~~~g~~~~l~C~~~~p~~~~~~~~w~~~~~~~~~~~-------~~~~l~~~~~-~~~~~g~y~C~~~~~~g~~~~~~~~l 137 (150)
..+|+.+.|.|.. .| .+.+.|++++..+.... ....|.|.++ ...|.|.|.|.+.|..|...+..+.|
T Consensus 125 ~~~G~~v~L~C~g-~p---~p~i~W~k~~~~l~~~~~~~~~~~~~~~L~I~~v~~~~D~G~Y~C~A~N~~g~~~s~~l~l 200 (204)
T 1sy6_A 125 SISGTTVILTCPQ-YP---GSEILWQHNDKNIGGDEDDKNIGSDEDHLSLKEFSELEQSGYYVCYPRGSKPEDANFYLYL 200 (204)
T ss_dssp EEETTEEEEECSC-CC---SSCEEEEETTEEESCCTTCTTEEEETTEEEETTCCHHHHCEEEEEEETTSCGGGSSCEEEE
T ss_pred eecCCcEEEEcCC-CC---CCceEEEECCEECCCccCCceEecCCCEEEEeeCCccccCEEEEEEeccCCCCceeEEEEE
Confidence 2389999999984 56 67799999988765431 1468999999 99999999999999998545666666
Q ss_pred EEc
Q psy11131 138 QLG 140 (150)
Q Consensus 138 ~v~ 140 (150)
.+.
T Consensus 201 ~~~ 203 (204)
T 1sy6_A 201 RAR 203 (204)
T ss_dssp EEC
T ss_pred EEe
Confidence 653
No 158
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.67 E-value=1.8e-16 Score=106.36 Aligned_cols=114 Identities=17% Similarity=0.184 Sum_probs=88.3
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCc
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGR 95 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~ 95 (150)
.+|.|.+++.+|+|.|+|.+.+.. ..+.|.|.. +...+. ..+.+|+.+.|.|.+. .| .+.+.|++++.
T Consensus 67 ~~L~I~~v~~~D~G~Y~C~~~n~~----~~~~l~V~~---~~~~~~-~~v~~G~~v~l~C~~~~~p---~~~v~W~~~~~ 135 (363)
T 1wio_A 67 FPLIIKNLKIEDSDTYICEVEDQK----EEVQLLVFG---LTANSD-THLLQGQSLTLTLESPPGS---SPSVQCRSPRG 135 (363)
T ss_dssp CCEEECSCCGGGCEEEEEEETTEE----EEEEEEEEE---EEESSC-SSEESBSCEEEEEECCTTC---CCCEEEECSSS
T ss_pred EEEEECCCCHHHCEEEEEEEEECC----CcEEEEEEe---CCCCCc-eEEecCCCEEEEEEcCCCC---CCeEEEEcCCC
Confidence 579999999999999999998863 356666664 222232 3568999999999998 88 89999999876
Q ss_pred ccCCCcceeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCcCc
Q psy11131 96 QIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGTRN 144 (150)
Q Consensus 96 ~~~~~~~~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p~ 144 (150)
.+.. ....|.|.++..+|.|.|.|.+.+..+ .....+.+.|..+|+
T Consensus 136 ~~~~--~~~~L~i~~v~~~d~G~Y~C~a~~~~~-~~~~~~~l~v~~~p~ 181 (363)
T 1wio_A 136 KNIQ--GGKTLSVSQLELQDSGTWTCTVLQNQK-KVEFKIDIVVLAFQK 181 (363)
T ss_dssp CEEE--ESSEEEECSBCGGGCEECEEEEEETTE-EEEECCEECEECCSC
T ss_pred cccc--cceEEEEeeCChhcCCEEEEEEecCCC-eEEEEEEEEEecCCC
Confidence 5422 156899999999999999999998755 455666776665553
No 159
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.67 E-value=2e-15 Score=97.94 Aligned_cols=117 Identities=21% Similarity=0.259 Sum_probs=80.5
Q ss_pred CCceEEeC----CeEEEcCCCCCCCeEEEEEeccCCcc-eeEEEEEEEecCc--------------eEEeCCCcEEEecC
Q psy11131 9 GPRTRVLG----PILAIEGVTAEDSGTYRCSSSNIGGE-ATAEVRLQVSTPY--------------RVDVNPPLLSVHLD 69 (150)
Q Consensus 9 ~~~~~~~~----~~l~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~~l~v~~~~--------------~~~~~~~~~~~~~g 69 (150)
+.|+.+.. .+|.|.+++.+|+|.|.|.+.+..+. ......|.|...+ .....+....+.+|
T Consensus 70 ~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G 149 (276)
T 3auv_A 70 PSRFSGSGSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPG 149 (276)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCCCCCCEEEEC-----------------CCEEEEECCEEECTT
T ss_pred CCCEEEeccCCeEEEEEccCChhhCEEEEEEEecCCcccccCCEEEEEecCCCccccccccccCcceEEECCCceEecCC
Confidence 35666543 37999999999999999999986543 2333567776532 11223445678899
Q ss_pred CcEEEEEEec-CCCCCCcEEEEeecC--ccc-----------------CCCcc----------eeeEEEccCCCCCCceE
Q psy11131 70 GSANFQCEIT-PYDSGPYLIAWFKDG--RQI-----------------PGRTS----------STSLVINPVGREDRGIY 119 (150)
Q Consensus 70 ~~~~l~C~~~-~p~~~~~~~~w~~~~--~~~-----------------~~~~~----------~~~l~~~~~~~~~~g~y 119 (150)
+.+.|.|.+. .+.. .+.+.|++++ ... ....+ ...|.|.++..+|+|.|
T Consensus 150 ~~v~L~C~~~g~~~~-~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y 228 (276)
T 3auv_A 150 GSLRLSCAASGFTIS-DYWIHWVRQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVY 228 (276)
T ss_dssp CCEEEEEEEESSCGG-GSEEEEEEECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEE
T ss_pred CeEEEEEEecCccCC-CCEEEEEEcCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCChhHCEEE
Confidence 9999999998 5400 3899999863 111 00111 23799999999999999
Q ss_pred EEEEEeC
Q psy11131 120 QCIARRS 126 (150)
Q Consensus 120 ~C~~~~~ 126 (150)
.|.+.|.
T Consensus 229 ~C~a~n~ 235 (276)
T 3auv_A 229 YCARFVF 235 (276)
T ss_dssp EEEEECS
T ss_pred EEEEEcC
Confidence 9999997
No 160
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.67 E-value=3.3e-15 Score=95.97 Aligned_cols=106 Identities=20% Similarity=0.354 Sum_probs=79.8
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCc---ceeEEEEEEEecC-----------------ceEEeCCCcEEEecCCcEEEEE
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGG---EATAEVRLQVSTP-----------------YRVDVNPPLLSVHLDGSANFQC 76 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~---~~~~~~~l~v~~~-----------------~~~~~~~~~~~~~~g~~~~l~C 76 (150)
.+|.|.+++.+|+|.|+|.+.+..+ .......|.|... +.+...+....+.+|+.+.|.|
T Consensus 79 ~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C 158 (259)
T 3omz_A 79 LRMILRNLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQSSVSMPVRKAVTLNC 158 (259)
T ss_dssp CEEEESSCCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC------------------CEEECCCCCEEEETTCCEEECC
T ss_pred EEEEECCCCcccCEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeCCEEEEcCCCCEEEEE
Confidence 5799999999999999999988654 2334467777753 3455566678899999999999
Q ss_pred Eec-C-CCCCCcEEEEeecCc--ccC----------------------CCcceeeEEEccCCCCCCceEEEEEEe
Q psy11131 77 EIT-P-YDSGPYLIAWFKDGR--QIP----------------------GRTSSTSLVINPVGREDRGIYQCIARR 125 (150)
Q Consensus 77 ~~~-~-p~~~~~~~~w~~~~~--~~~----------------------~~~~~~~l~~~~~~~~~~g~y~C~~~~ 125 (150)
... . + .+.+.|++... .+. .......|.|.++..+|+|.|.|.+..
T Consensus 159 ~~~~~~~---~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 230 (259)
T 3omz_A 159 LYETSWW---SYYIFWYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISALQLEDSAKYFCALGE 230 (259)
T ss_dssp EEECCCS---SCEEEEEEECTTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEEESSCCGGGCSEEEEEEES
T ss_pred ECCCccC---CceEEEeeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEEECCCChhHCEEEEEEEeC
Confidence 887 4 6 89999987432 100 000034699999999999999999974
No 161
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.67 E-value=3.4e-16 Score=103.99 Aligned_cols=125 Identities=18% Similarity=0.306 Sum_probs=92.3
Q ss_pred CceEEeC--CeEEEcCCCCCCCeEEEEEeccCCc----ceeEEEEEEEec-----CceEEeCCCcEEEecCCcEEEEEEe
Q psy11131 10 PRTRVLG--PILAIEGVTAEDSGTYRCSSSNIGG----EATAEVRLQVST-----PYRVDVNPPLLSVHLDGSANFQCEI 78 (150)
Q Consensus 10 ~~~~~~~--~~l~i~~~~~~d~G~Y~C~~~~~~~----~~~~~~~l~v~~-----~~~~~~~~~~~~~~~g~~~~l~C~~ 78 (150)
.++.... +.|.|.+++.+|+|.|+|.+.|..+ ..+..+.|.|.. +|.+...+....+.+|+.+.|.|.+
T Consensus 171 ~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~~~~~P~i~~~~~~~~v~~G~~v~L~C~~ 250 (339)
T 3o4o_C 171 EKFLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETIPVIISPLKTISASLGSRLTIPCKV 250 (339)
T ss_dssp SSEEECTTSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEECCCCCCCCEECCCSCCCCCCCCSCCCCCCCE
T ss_pred ceeEEcCCcceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCCCCCCCEEecCCceeEeccCCCEEEEEEE
Confidence 4555554 4799999999999999999998765 356677888874 3344444455567889999999999
Q ss_pred ---c-CCCCCCcEEEEeecCcccCCCc---------c-----------eeeEEEccCCCCCC-ceEEEEEEeCCCCceee
Q psy11131 79 ---T-PYDSGPYLIAWFKDGRQIPGRT---------S-----------STSLVINPVGREDR-GIYQCIARRSDGDVAQG 133 (150)
Q Consensus 79 ---~-~p~~~~~~~~w~~~~~~~~~~~---------~-----------~~~l~~~~~~~~~~-g~y~C~~~~~~g~~~~~ 133 (150)
. .|. .+.+.|.+++..+.... . ...|.|.++..+|. |.|.|.+.|..| ..+.
T Consensus 251 ~~~~g~P~--~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G-~~~~ 327 (339)
T 3o4o_C 251 FLGTGTPL--TTMLWWTANDTHIESAYPGGRVTEGPRQEYSENNENYIEVPLIFDPVTREDLHMDFKCVVHNTLS-FQTL 327 (339)
T ss_dssp EESSSCCS--SCEEEEESSSSCSSSSSCSSSCEECCCEECCCSSSCEEEECCEECSSCCCSCCCCCEEEEEETTE-EECC
T ss_pred ECCCCCCC--CceEEEEECCeecccccccccceecceEEecccCceEEEEEEEEEEechhhcCccEEEEEEeccC-ceEE
Confidence 6 442 67899998886543210 0 12799999999997 999999999998 4444
Q ss_pred eEEE
Q psy11131 134 SAEL 137 (150)
Q Consensus 134 ~~~l 137 (150)
.+.+
T Consensus 328 ~~~~ 331 (339)
T 3o4o_C 328 RTTV 331 (339)
T ss_dssp BCCC
T ss_pred EEEh
Confidence 4433
No 162
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.66 E-value=4e-16 Score=97.35 Aligned_cols=119 Identities=21% Similarity=0.329 Sum_probs=83.0
Q ss_pred CCceEEeC----CeEEEcCCCCCCCeEEEEEeccCCcc-eeEEEEEEE---ecCceEEeCCCcEEEecCCcEEEEEEec-
Q psy11131 9 GPRTRVLG----PILAIEGVTAEDSGTYRCSSSNIGGE-ATAEVRLQV---STPYRVDVNPPLLSVHLDGSANFQCEIT- 79 (150)
Q Consensus 9 ~~~~~~~~----~~l~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~~l~v---~~~~~~~~~~~~~~~~~g~~~~l~C~~~- 79 (150)
+.|+.+.. .+|.|.+++.+|+|.|.|.+.+..+. ......|.| ..+|.+...+.......|..+.|.|.+.
T Consensus 59 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~~~~v~l~C~~~g 138 (213)
T 3r06_A 59 PSRFSGSGSGRDSSFTISSLESEDIGSYYCQQYYNYPWTFGPGTKLEIKRADAKPTVSIFPPSSEQLGTGSATLVCFVNN 138 (213)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEE
T ss_pred CCcEEEeccCCEEEEEECCCCcccCEEEEEecccCCceEEcCCceEEEeccCCCceeeeeCCCceecCCCCcEEEEEEee
Confidence 45666543 48999999999999999999886442 334456777 3445554444333344677899999998
Q ss_pred CCCCCCcEEEEeecCcccCCCc-c--------------eeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 80 PYDSGPYLIAWFKDGRQIPGRT-S--------------STSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 80 ~p~~~~~~~~w~~~~~~~~~~~-~--------------~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
.+.. .+.+.|++++..+.... . ...|.+......|.|.|+|.+.|...
T Consensus 139 ~~p~-~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~YtC~v~n~~~ 201 (213)
T 3r06_A 139 FYPK-DINVKWKVDGSEKRDGVLQSVTDQDSKDSTYSLSSTLSLTKADYERHNLYTCEVTHKTS 201 (213)
T ss_dssp EBSS-CEEEEEEETTEEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTC
T ss_pred ecCC-ceEEEEEECCcccCCceEeccCceeCCCCcEEEEEEEEeCHHHhccCCeEEEEEEeccc
Confidence 4400 35899999987765421 0 23566777777789999999999764
No 163
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.66 E-value=4.3e-15 Score=96.70 Aligned_cols=129 Identities=21% Similarity=0.322 Sum_probs=88.1
Q ss_pred CceEEeC------CeEEEcCCCCCCCeEEEEEeccCCc---c--eeEEEEEEEecCc---------------eEEeCCCc
Q psy11131 10 PRTRVLG------PILAIEGVTAEDSGTYRCSSSNIGG---E--ATAEVRLQVSTPY---------------RVDVNPPL 63 (150)
Q Consensus 10 ~~~~~~~------~~l~i~~~~~~d~G~Y~C~~~~~~~---~--~~~~~~l~v~~~~---------------~~~~~~~~ 63 (150)
.|+.+.. .+|.|.+++.+|+|.|.|.+.+..| . ....+.|.|...+ .+...+..
T Consensus 92 ~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~~ 171 (282)
T 1qok_A 92 GKATFTTDTSSNTAYLQLSSLTSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPAI 171 (282)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEECSE
T ss_pred CcEEEEEecCCCeEEEEECcCChhhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCCCE
Confidence 5666642 4799999999999999999998754 1 1234577777542 23344556
Q ss_pred EEEecCCcEEEEEEec-CCCCCCcEEEEee--cCcccC------------CCcc--------eeeEEEccCCCCCCceEE
Q psy11131 64 LSVHLDGSANFQCEIT-PYDSGPYLIAWFK--DGRQIP------------GRTS--------STSLVINPVGREDRGIYQ 120 (150)
Q Consensus 64 ~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~--~~~~~~------------~~~~--------~~~l~~~~~~~~~~g~y~ 120 (150)
..+.+|+.+.|.|.+. .+ +.+.|++ ++..+. ...+ ...|.|.++..+|.|.|.
T Consensus 172 ~~v~~G~~v~L~C~~~~~~----~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~ 247 (282)
T 1qok_A 172 MSASPGEKVTITCSASSSV----SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYY 247 (282)
T ss_dssp EEECTTCCEEEEEEESSCC----SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred EEEcCCCcEEEEEEecCCC----ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCChhHCEEEE
Confidence 6788999999999998 54 5899998 444321 0111 347999999999999999
Q ss_pred EEEEeCCCCceeeeEEEEEcCc
Q psy11131 121 CIARRSDGDVAQGSAELQLGGT 142 (150)
Q Consensus 121 C~~~~~~g~~~~~~~~l~v~~~ 142 (150)
|.+.+........-..|.|...
T Consensus 248 C~a~~~~~~~fg~gt~l~V~~~ 269 (282)
T 1qok_A 248 CQQRSSYPLTFGAGTKLELKRA 269 (282)
T ss_dssp EEECSSSSCEECCCEEEEEC--
T ss_pred EEEeeCCCceEeCCEEEEEecc
Confidence 9998753322334455666543
No 164
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.66 E-value=9.7e-17 Score=101.51 Aligned_cols=117 Identities=22% Similarity=0.328 Sum_probs=80.2
Q ss_pred CceEEeC----CeEEEcCCCCCCCeEEEEEeccCCcc---eeEEEEEEEec----CceEEeCCCcEEEecCCcEEEEEEe
Q psy11131 10 PRTRVLG----PILAIEGVTAEDSGTYRCSSSNIGGE---ATAEVRLQVST----PYRVDVNPPLLSVHLDGSANFQCEI 78 (150)
Q Consensus 10 ~~~~~~~----~~l~i~~~~~~d~G~Y~C~~~~~~~~---~~~~~~l~v~~----~~~~~~~~~~~~~~~g~~~~l~C~~ 78 (150)
.|+.... .+|.|.+++.+|+|.|.|.+.+..+. ....+.|.|.. +|.+...+.......|+.+.|.|.+
T Consensus 80 ~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~ 159 (234)
T 2j6e_L 80 DRFSGSKSGTSASLAISGLRSEDEADYYCATWDDSLSAVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLI 159 (234)
T ss_dssp TTEEEEEETTEEEEEEESCCSTTCSEEEEEEEETTTTEEEECCCBCCCBCCCCCCCCCCCEECCCHHHHTTSCCCEEECC
T ss_pred ccEEEEecCCeEEEEECCCCHHHCEEEEEEEEcCCcceeEecCCEEEEEecCCCCCCcccccCCChhHhcCCceEEEEEE
Confidence 4665542 48999999999999999999987652 22234566632 2332221221122357899999999
Q ss_pred c-CCCCCC-cEEEEeecCcccCCCcc--------------eeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 79 T-PYDSGP-YLIAWFKDGRQIPGRTS--------------STSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 79 ~-~p~~~~-~~~~w~~~~~~~~~~~~--------------~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
. .+. . +.+.|++++..+..... .+.|.|.....+|.|.|+|.|.|..+
T Consensus 160 ~g~~p--~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~ 223 (234)
T 2j6e_L 160 SDFFP--GAVTVAWKADGAPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGS 223 (234)
T ss_dssp CBCSS--CCCEEEEEETTEECCSSEEECCCCCCTTSCCBCCEEECCCGGGTTTSCCEEEEEEBTTB
T ss_pred EEEcC--CceEEEEEECCEECCCCccccCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEeCCC
Confidence 8 440 3 49999999876643210 24688888888999999999999866
No 165
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.66 E-value=1.2e-16 Score=116.17 Aligned_cols=126 Identities=21% Similarity=0.286 Sum_probs=36.1
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCceEEeCC---CcEEEecCCcEEEEEEec-CCCCCCcEEEEee
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVDVNP---PLLSVHLDGSANFQCEIT-PYDSGPYLIAWFK 92 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~---~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~ 92 (150)
..|.|.+++.+|+|.|+|.+.+..+.....+.|.|..+|.+...+ ....+.+|+.+.|.|.+. .| .+.+.|++
T Consensus 290 ~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p---~~~v~W~~ 366 (772)
T 3v2a_R 290 STLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEKPFVAFGSGMESLVEATVGERVRIPAKYLGYP---PPEIKWYK 366 (772)
T ss_dssp EEEEESSCCSTTCSEEEEEEECSSCEEEEEEEEEEECCCC----------------------------------------
T ss_pred EEEEECcCCcCCCeEEEEEEEcCCcceeEEEEEEEeCCCeeEeccCCCCcEEEcCCCcEEEEEEEeeeC---CCeEEEEE
Confidence 679999999999999999999988878888899998877654332 345678899999999999 88 89999999
Q ss_pred cCcccCCCcc---eeeEEEccCCCCCCceEEEEEEeCCCCc-eeeeEEEEEcCcCcc
Q psy11131 93 DGRQIPGRTS---STSLVINPVGREDRGIYQCIARRSDGDV-AQGSAELQLGGTRNI 145 (150)
Q Consensus 93 ~~~~~~~~~~---~~~l~~~~~~~~~~g~y~C~~~~~~g~~-~~~~~~l~v~~~p~~ 145 (150)
++..+..... ...|.|..+..+|.|.|.|.+.|..|.. .+..+.+.|..+|.+
T Consensus 367 ~g~~l~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~s~~~~l~v~~~P~~ 423 (772)
T 3v2a_R 367 NGIPLESNHTIKAGHVLTIMEVSERDTGNYTVILTNPISKEKQSHVVSLVVYVPPQI 423 (772)
T ss_dssp ---------------------------------------------------------
T ss_pred CCEeCCCCceEccceeEEEecCChhcCceEEEEEEECCcCeEEEEEEEEEEecCCcc
Confidence 8877654322 3789999999999999999999988732 245666777666544
No 166
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.65 E-value=1.4e-15 Score=106.41 Aligned_cols=111 Identities=14% Similarity=0.259 Sum_probs=83.5
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCceEEe-CCCcEE-EecCCcEEEEEEec-CCC-CCCcEEEEee
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVDV-NPPLLS-VHLDGSANFQCEIT-PYD-SGPYLIAWFK 92 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~-~~~~~~-~~~g~~~~l~C~~~-~p~-~~~~~~~w~~ 92 (150)
+.|.|.++..+| |.|+|.+.|..|.......|.|...|.+.. .+.... +.+|+.+.|.|.+. .|. ...+.+.|++
T Consensus 281 s~L~i~~~~~~d-G~Y~C~a~n~~g~~~~~~~l~v~~~P~~~~~~p~~~~~v~~g~~~~l~C~~~g~~p~~~~~~v~W~k 359 (523)
T 2rcj_C 281 SVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPLSLPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPQVKFNWYV 359 (523)
T ss_pred EEEEechhhcCC-ceEEEEEEeCCCCcceEEecCCCcCceEEecCCCchhhcccCCceEEEEEEecccCCCCceEEEEEE
Confidence 479999999999 999999999888877777777765555433 333233 67899999999998 441 0025999999
Q ss_pred cCcccCCCcc-------------eeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 93 DGRQIPGRTS-------------STSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 93 ~~~~~~~~~~-------------~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
++..+..... .+.|.|..+..+|.|.|.|.|.|..+
T Consensus 360 ~g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~ 408 (523)
T 2rcj_C 360 DGVQVHNAKTKPREQQYNSTYRVVSVLTVLHQNWLDGKEYKCKVSNKAL 408 (523)
T ss_pred CCeEccCCccCCceecCCCcEEEEEEEEECHHHhcCCCeEEEEEeCCCC
Confidence 9877643221 24588888888999999999998866
No 167
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.65 E-value=1e-15 Score=105.23 Aligned_cols=107 Identities=13% Similarity=0.185 Sum_probs=86.9
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCceEE-eCCCcEEEecCCcEEEEEEec-CCCCCCc---EEEEe
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVD-VNPPLLSVHLDGSANFQCEIT-PYDSGPY---LIAWF 91 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~-~~~~~~~~~~g~~~~l~C~~~-~p~~~~~---~~~w~ 91 (150)
..|.|.+++. |.| |+|.+.+..+..+..+.|.|..+|... ..+....+.+|+.+.|.|.+. .| ++ .+.|+
T Consensus 50 ~~l~i~~v~~-d~g-Y~C~a~~~~~~~~~~~~l~V~~~P~~~~~~~~~~~v~~G~~v~L~C~~~g~~---~~~~~~v~W~ 124 (450)
T 1z7z_I 50 KVYELSNVQE-DSQ-PMCYSNCPDGQSTAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGA---PRANLTVVLL 124 (450)
T ss_dssp EEEEEEEECS-CBC-CEEEEEETTEEEEEECEEEEEBCCSEEEECCCCSEECTTSEEEEEEEEECCB---CGGGEEEEEE
T ss_pred eEEEEEeccc-CCe-eEEEEeCCCCcceeEEEEEEEeCCCcceecCCCceEeeCCeEEEEEEecCCC---CCcCcEEEEe
Confidence 4689999987 999 999998766667777888888766554 555556788999999999998 77 66 99999
Q ss_pred ecCcccCCCcc-----eeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 92 KDGRQIPGRTS-----STSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 92 ~~~~~~~~~~~-----~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
+++..+..... ...|.|..+..+|.|.|.|.+.|..|
T Consensus 125 k~g~~l~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g 166 (450)
T 1z7z_I 125 RGEKELKREPAVGEPAEVTTTVLVRRDHHGANFSCRTELDLR 166 (450)
T ss_dssp ETTEEEEEEECCTTTEEEEEEEECCSSCSSCEEEEEEEEECG
T ss_pred eCCEEeecccccccccceEEEEEeeccccCceEEEEEEcccC
Confidence 99876643221 46899999999999999999999866
No 168
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.65 E-value=7.9e-15 Score=83.09 Aligned_cols=88 Identities=19% Similarity=0.227 Sum_probs=73.6
Q ss_pred CceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCcc--------eeeEEEccCCCCCCceEEEEEE
Q psy11131 54 PYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRTS--------STSLVINPVGREDRGIYQCIAR 124 (150)
Q Consensus 54 ~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~~--------~~~l~~~~~~~~~~g~y~C~~~ 124 (150)
+|.+...+....+.+|+.+.|.|.+. .| .+.+.|++++..+..... ...|.|.++..+|.|.|.|.+.
T Consensus 7 pp~i~~~~~~~~v~~G~~v~l~C~~~g~p---~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 83 (114)
T 2cqv_A 7 GPQIIQFPEDQKVRAGESVELFGKVTGTQ---PITCTWMKFRKQIQESEHMKVENSENGSKLTILAARQEHCGCYTLLVE 83 (114)
T ss_dssp CCEESCCCCSEEEETTCCEEEEEEEESSS---SCEEEEEESSSBCCCSSSEEEEECSSEEEEEETTCCTTTCEEEEEEEE
T ss_pred CCEEEeCCCCeEEeCCCeEEEEEEEEcCC---CCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhcCEEEEEEEE
Confidence 45555566778899999999999999 89 999999999887754432 3579999999999999999999
Q ss_pred eCCCCceeeeEEEEEcCcCcc
Q psy11131 125 RSDGDVAQGSAELQLGGTRNI 145 (150)
Q Consensus 125 ~~~g~~~~~~~~l~v~~~p~~ 145 (150)
|..| .....+.|.|.+.|..
T Consensus 84 N~~g-~~~~~~~l~V~~~p~~ 103 (114)
T 2cqv_A 84 NKLG-SRQAQVNLTVVDKPDP 103 (114)
T ss_dssp CSSC-EEECCEEEEEECSCSC
T ss_pred ECCC-cEEEEEEEEEECCCCC
Confidence 9999 6788899999876544
No 169
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.65 E-value=7.7e-16 Score=97.43 Aligned_cols=119 Identities=22% Similarity=0.316 Sum_probs=82.8
Q ss_pred CCceEEeC----CeEEEcCCCCCCCeEEEEEeccCCcc-eeEEEEEEEec---CceEEeCCCcEEEecCCcEEEEEEec-
Q psy11131 9 GPRTRVLG----PILAIEGVTAEDSGTYRCSSSNIGGE-ATAEVRLQVST---PYRVDVNPPLLSVHLDGSANFQCEIT- 79 (150)
Q Consensus 9 ~~~~~~~~----~~l~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~~l~v~~---~~~~~~~~~~~~~~~g~~~~l~C~~~- 79 (150)
+.|+.... .+|.|.+++.+|+|.|.|.+.+..+. ......|.|.. +|.+...+.......|+.+.|.|.+.
T Consensus 82 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~~ 161 (237)
T 3sob_L 82 PSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNN 161 (237)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEECCCBCCEEEEECCCHHHHHHTEEEEEEEEEE
T ss_pred CCcEEEEcCCCEEEEEECCCChhhCeEEEEeeccCCceEEcCcEEEEEecCCCCCceEEeCCChhhccCCceEEEEEEcc
Confidence 45666542 57999999999999999999876542 23344666643 34443323222233578899999998
Q ss_pred CCCCCCcEEEEeecCcccCCCc-----------c----eeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 80 PYDSGPYLIAWFKDGRQIPGRT-----------S----STSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 80 ~p~~~~~~~~w~~~~~~~~~~~-----------~----~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
.+.. .+.+.|++++..+.... . ...|.+.....+|.|.|+|.+.|...
T Consensus 162 ~~p~-~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~ 224 (237)
T 3sob_L 162 FYPR-EAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGL 224 (237)
T ss_dssp EBSS-CCEEEEEETTEECCSSEEEEECCCCTTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTC
T ss_pred cCCC-ceEEEEEECCCCCCCceeecccccccCCCcEEEEEEEEEcHHHccCCCcEEEEEeeCCC
Confidence 4400 37999999988765421 0 34577888888899999999999865
No 170
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.65 E-value=7.4e-15 Score=92.31 Aligned_cols=117 Identities=17% Similarity=0.197 Sum_probs=83.2
Q ss_pred CCceEEeC------CeEEEcCCCCCCCeEEEEEeccCCcc---eeEEEEEEEec----CceEEeCCCcEEEecCCcEEEE
Q psy11131 9 GPRTRVLG------PILAIEGVTAEDSGTYRCSSSNIGGE---ATAEVRLQVST----PYRVDVNPPLLSVHLDGSANFQ 75 (150)
Q Consensus 9 ~~~~~~~~------~~l~i~~~~~~d~G~Y~C~~~~~~~~---~~~~~~l~v~~----~~~~~~~~~~~~~~~g~~~~l~ 75 (150)
..|+.+.. .+|.|.+++.+|+|.|.|.+.+..+. ....+.|.|.. +|.+...+ ...+..|+.+.|.
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~-~~~~~~g~~v~L~ 143 (220)
T 2fbj_H 65 KDKFIISRDNAKNSLYLQMSKVRSEDTALYYCARLHYYGYNAYWGQGTLVTVSAESARNPTIYPLT-LPPALSSDPVIIG 143 (220)
T ss_dssp TTTEEEEECSSSCEEEEEECSCCGGGCEEEEEEEEETTTEEEEECCCEEEEECSSCCBCCEEEEEC-CCSSSCCSSEEEE
T ss_pred CCcEEEEeeCCCCEEEEEECCCChhhCEEEEEEEeccccccceecCCEEEEecCCCCCCCEEEEee-cccccCCCcEEEE
Confidence 36777653 48999999999999999999876442 22345788874 23333222 2224578999999
Q ss_pred EEec-C-CCCCC--cEEEEeecCcccCC---------Ccc---eeeEEEccCCCCCCceEEEEEEeCCCC
Q psy11131 76 CEIT-P-YDSGP--YLIAWFKDGRQIPG---------RTS---STSLVINPVGREDRGIYQCIARRSDGD 129 (150)
Q Consensus 76 C~~~-~-p~~~~--~~~~w~~~~~~~~~---------~~~---~~~l~~~~~~~~~~g~y~C~~~~~~g~ 129 (150)
|.+. . | . +.+.|++++..+.. ... .+.|.|......|.|.|+|.+.|..+.
T Consensus 144 C~~~g~~P---~~~~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~ytC~v~n~~~~ 210 (220)
T 2fbj_H 144 CLIHDYFP---SGTMNVTWGKSGKDITTVNFPPALASGGRYTMSNQLTLPAVECPEGESVKCSVQHDSNP 210 (220)
T ss_dssp EEEEEEBS---CCCEEEEESCCCSSCEEEECCCEECSSSCEEEEEEEEECGGGSCTTCEEEEEEEETTSC
T ss_pred EEEEeEEC---CCcEEEEEecCCEecceEecCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCc
Confidence 9998 4 7 6 79999998765411 111 235888888888999999999998873
No 171
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.64 E-value=1.2e-15 Score=85.66 Aligned_cols=96 Identities=23% Similarity=0.366 Sum_probs=65.3
Q ss_pred EEEEEecCceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCcc------eeeEEEccCCCCCCceE
Q psy11131 47 VRLQVSTPYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRTS------STSLVINPVGREDRGIY 119 (150)
Q Consensus 47 ~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~~------~~~l~~~~~~~~~~g~y 119 (150)
+.|.+..+|.+...+....+.+|+.+.|.|.+. .| .+.+.|++++..+..... ...|.|.++..+|.|.|
T Consensus 3 ~~v~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p---~p~i~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y 79 (108)
T 3kvq_A 3 LTVLERVAPTITGNLENQTTSIGESIEVSCTASGNP---PPQIMWFKDNETLVEDSGIVLKDGNRNLTIRRVRKEDEGLY 79 (108)
T ss_dssp --------CCCBSCCCCEEEETTCCEEEECBCC-------CCEEEEESSSBCCCBTTEEEETTTTEEEECSCCGGGCEEE
T ss_pred eeECccCCCceecCCCCeEEeCCCeEEEEEECcCcC---CCeEEEEECCeEcccCCCeEEeCCCcEEEEeecCcccCEEE
Confidence 345566677777777788899999999999999 88 889999999887654332 46799999999999999
Q ss_pred EEEEEeCCCCceeeeEEEEEcCcCccc
Q psy11131 120 QCIARRSDGDVAQGSAELQLGGTRNIK 146 (150)
Q Consensus 120 ~C~~~~~~g~~~~~~~~l~v~~~p~~~ 146 (150)
.|.+.|..| .....+.|.|.++|...
T Consensus 80 ~C~a~n~~g-~~~~~~~l~V~~~~~~~ 105 (108)
T 3kvq_A 80 TCQACSVLG-CAKVEAFFIIEGAQEKT 105 (108)
T ss_dssp EEEEC-----CEEEEEEEEEEC-----
T ss_pred EEEEEeCCC-ceEEEEEEEEeCCCccc
Confidence 999999998 57788899998877543
No 172
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.64 E-value=8.3e-16 Score=98.42 Aligned_cols=117 Identities=24% Similarity=0.321 Sum_probs=82.3
Q ss_pred CceEEeC----CeEEEcCCCCCCCeEEEEEeccCCcce-eEEEEEEEec---CceEEeCCCcEEEecCCcEEEEEEec--
Q psy11131 10 PRTRVLG----PILAIEGVTAEDSGTYRCSSSNIGGEA-TAEVRLQVST---PYRVDVNPPLLSVHLDGSANFQCEIT-- 79 (150)
Q Consensus 10 ~~~~~~~----~~l~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~v~~---~~~~~~~~~~~~~~~g~~~~l~C~~~-- 79 (150)
.|+.+.. .+|.|.+++.+|+|.|+|.+.+..+.. .....|.|.. +|.+...+.......|..+.|.|.+.
T Consensus 102 ~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~ 181 (254)
T 2c1o_A 102 DRFTGSGSGTDFTLKISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNF 181 (254)
T ss_dssp TTEEEEEETTEEEEEESSCCGGGCSEEEEEECSSSSCEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEE
T ss_pred ceEEEecCCCEEEEEECcCCcccCEEEEEEEEcCcceEecCCEEEEECCCCCCCeeEeecCChhhccCCcEEEEEEEecc
Confidence 5665543 379999999999999999999875432 2234566663 34444322222223577999999997
Q ss_pred CCCCCCcEEEEeecCcccCCC--c----------c---eeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 80 PYDSGPYLIAWFKDGRQIPGR--T----------S---STSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 80 ~p~~~~~~~~w~~~~~~~~~~--~----------~---~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
.|. .+.+.|++++..+... . . ...|.|.++..+|.|.|.|.|.|...
T Consensus 182 ~p~--~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~ 243 (254)
T 2c1o_A 182 YPK--DINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTS 243 (254)
T ss_dssp BSS--CCEEEEEESSSEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTC
T ss_pred cCC--CcEEEEEECCCcccCcceeccccccCCCCcEEEEEEEEeccccccCCCeEEEEEEcCCC
Confidence 340 2579999998776544 0 0 35788999999999999999999765
No 173
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.64 E-value=9.7e-17 Score=100.14 Aligned_cols=117 Identities=21% Similarity=0.261 Sum_probs=82.5
Q ss_pred CCceEEeC----CeEEEcCCCCCCCeEEEEEeccC-Ccc--eeEEEEEEEe----cCceEEeCCCcEEEecCCcEEEEEE
Q psy11131 9 GPRTRVLG----PILAIEGVTAEDSGTYRCSSSNI-GGE--ATAEVRLQVS----TPYRVDVNPPLLSVHLDGSANFQCE 77 (150)
Q Consensus 9 ~~~~~~~~----~~l~i~~~~~~d~G~Y~C~~~~~-~~~--~~~~~~l~v~----~~~~~~~~~~~~~~~~g~~~~l~C~ 77 (150)
..|+.+.. .+|.|.+++.+|+|.|+|.+.+. .+. ......|.|. .+|.+...+......+|+.+.|.|.
T Consensus 57 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~ 136 (212)
T 1nfd_E 57 PERFSGSTSGTTATLTISGAQPEDEAAYYCLSSYGDNNDLVFGSGTQLTVLRGPKSSPKVTVFPPSPEELRTNKATLVCL 136 (212)
T ss_dssp CTTEEEEEETTEEEEEETTCCGGGCSEEEEEEEETTTTEEEECCCEEEEEECCCCBCCEEECCCCCHHHHHTTEECCCEE
T ss_pred cccEEEEeeCCEEEEEECcCCcccCEEEEEEEEcccCcccccCCceEEEEccCCCCCCEEEeeCCchHhccCCceEEEEE
Confidence 35665543 47999999999999999999862 221 1233556664 3444544333333457889999999
Q ss_pred ec-C-CCCCC-cEEEEeecCcccCCCcc-------------eeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 78 IT-P-YDSGP-YLIAWFKDGRQIPGRTS-------------STSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 78 ~~-~-p~~~~-~~~~w~~~~~~~~~~~~-------------~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
+. . | . +.+.|++++..+..... .+.|.|.++..+|.|.|.|.|.|..+
T Consensus 137 ~~g~~p---~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~ 200 (212)
T 1nfd_E 137 VNDFYP---GSATVTWKANGATINDGVKTTKPSKQGQNYMTSSYLSLTADQWKSHNRVSCQVTHEGE 200 (212)
T ss_dssp EEEEBS---SCCEEEEEETTEEECSSCBCCCCBCSSSCEEEEEBCCEEHHHHHTCSCEEEEEECTTT
T ss_pred EEeeEC---CccEEEEEECCeEcCCCeecCCceecCCCceEEEEEEEchhhcCCCCeEEEEEEeCCc
Confidence 98 4 5 4 79999999876643211 23477888888999999999999876
No 174
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.64 E-value=6.4e-15 Score=94.87 Aligned_cols=123 Identities=15% Similarity=0.164 Sum_probs=90.8
Q ss_pred eCCeEEEcCC---CCCCCeE--EEEEeccCCcceeEEEEEEEecC--ceEEeCCCcEEEecCCcEEEEEEecCCCCCCcE
Q psy11131 15 LGPILAIEGV---TAEDSGT--YRCSSSNIGGEATAEVRLQVSTP--YRVDVNPPLLSVHLDGSANFQCEITPYDSGPYL 87 (150)
Q Consensus 15 ~~~~l~i~~~---~~~d~G~--Y~C~~~~~~~~~~~~~~l~v~~~--~~~~~~~~~~~~~~g~~~~l~C~~~~p~~~~~~ 87 (150)
.+..+.+..+ +.+|+|. |+|.+.+..+.....+.|.|... +.+.. ....+.+|+.+.|.|.+. | .+.
T Consensus 54 ~~~~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~~~~~~~~l~V~~~p~p~~~~--~~~~v~~G~~v~l~C~~~-p---~~~ 127 (265)
T 2oz4_A 54 GNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFPAPNVIL--TKPEVSEGTEVTVKCEAH-P---RAK 127 (265)
T ss_dssp CSSEEEEEEEEEECGGGCEEEEEEEEEEETTEEEEEEEEEEEECCCCCEEEE--SCSEEETTCEEEEEEECC-T---TSE
T ss_pred CCCeEEEEeecccccccCCcceEEEEEecCCCCcEEEEEEEEeCCCCceeec--CCceecCCCcEEEEEEcc-C---CCE
Confidence 3356666655 7788885 99999998888888889999763 33333 344578899999999997 7 899
Q ss_pred EEEeecCcccCCCcceeeEEEccCCCCCCceEEEEEEe-CCCCce--eeeEEEEEcCcCcc
Q psy11131 88 IAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARR-SDGDVA--QGSAELQLGGTRNI 145 (150)
Q Consensus 88 ~~w~~~~~~~~~~~~~~~l~~~~~~~~~~g~y~C~~~~-~~g~~~--~~~~~l~v~~~p~~ 145 (150)
+.| ++..+........|.+..+..+|.|.|.|.+.| ..|... +..+.|.|..+|..
T Consensus 128 i~W--~g~~~~~~~~~~~l~i~~~~~~~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~~~p~~ 186 (265)
T 2oz4_A 128 VTL--NGVPAQPLGPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRL 186 (265)
T ss_dssp EEE--SSCSSSCCSSEECCEEECCGGGTTEEEEEEEEEECSSSEEEEEEEEEEEEEEEEEC
T ss_pred EEE--CCEEccCCCCcEEEEEccccccCCceEEEEEEcCCCCCcccccccEEEEEEeCCcc
Confidence 999 776664433356788888888999999999985 446322 26677888776654
No 175
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.64 E-value=6.5e-15 Score=93.46 Aligned_cols=116 Identities=19% Similarity=0.227 Sum_probs=82.5
Q ss_pred CCceEEeC----CeEEEcCCCCCCCeEEEEEeccCCcc-eeEEEEEEEecCc------eEEeCCCcEEEecCCcEEEEEE
Q psy11131 9 GPRTRVLG----PILAIEGVTAEDSGTYRCSSSNIGGE-ATAEVRLQVSTPY------RVDVNPPLLSVHLDGSANFQCE 77 (150)
Q Consensus 9 ~~~~~~~~----~~l~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~~l~v~~~~------~~~~~~~~~~~~~g~~~~l~C~ 77 (150)
..|+.+.. .+|.|.+++.+|+|.|+|.+.+..+. ....+.|.|..++ .....+....+.+|+.+.|.|.
T Consensus 63 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~ 142 (240)
T 1moe_A 63 PVRFSGTGSRTDFTLIIDPVEADDVATYYCQQTNEDPYTFGGGTKLEIKGGGSGGGGEVQLQQSGAELVEPGASVKLSCT 142 (240)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCCBCCCEEEEECCCSCCCCCCCEEEECCCEEECTTCCEEEEEE
T ss_pred CccEEEEecCCeEEEEEcCCChhhCEEEEEEEccCCceeecCCEEEEEecCCCCCCceEEEeCCCceEEeCCCcEEEEEE
Confidence 35666543 37999999999999999999987544 3345677887532 2333455667889999999999
Q ss_pred ec-CCCCCCcEEEEeecC--cccC-----------------CCcc----------eeeEEEccCCCCCCceEEEEEEe
Q psy11131 78 IT-PYDSGPYLIAWFKDG--RQIP-----------------GRTS----------STSLVINPVGREDRGIYQCIARR 125 (150)
Q Consensus 78 ~~-~p~~~~~~~~w~~~~--~~~~-----------------~~~~----------~~~l~~~~~~~~~~g~y~C~~~~ 125 (150)
+. .|.. .+.+.|+++. ..+. ...+ ...|.|.++..+|+|.|.|.+..
T Consensus 143 ~~g~p~~-~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~ 219 (240)
T 1moe_A 143 ASGFNIK-DTYMHWVKQRPEQGLEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSEDTAVYYCAPFG 219 (240)
T ss_dssp EESSCGG-GSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECS
T ss_pred EcCccCC-CCEEEEEEECCCCCcEEEEEEcccCCccccCccccccEEEEEcccCCEEEEEECcCCHHHCEEEEEEEEe
Confidence 98 5510 2589999852 2110 0001 24699999999999999999984
No 176
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.63 E-value=1.3e-15 Score=94.97 Aligned_cols=115 Identities=17% Similarity=0.186 Sum_probs=80.5
Q ss_pred CCceEEeC------CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEec----CceEEeCCCcEEEecCCcEEEEEEe
Q psy11131 9 GPRTRVLG------PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVST----PYRVDVNPPLLSVHLDGSANFQCEI 78 (150)
Q Consensus 9 ~~~~~~~~------~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~----~~~~~~~~~~~~~~~g~~~~l~C~~ 78 (150)
..|+.+.. .+|.|.+++.+|+|.|.|.+.+.. .......|.|.. +|.+...+....+..|+.+.|.|.+
T Consensus 64 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~-~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~ 142 (210)
T 3d9a_H 64 KSRISITRDTSKNQYYLDLNSVTTEDTATYYCANWDGD-YWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLV 142 (210)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEETTSS-CBCCCEEEEECCCCCBCCEEEEECCTTSCCCSSEEEEEEEE
T ss_pred CceEEEEecCCCCEEEEEECCCCcccCEEEEEEEecCc-ccccceEEEeccCCCCCCEEEEecCCcccccCCcEEEEEEE
Confidence 46776642 389999999999999999999853 222235677763 2333322222234679999999999
Q ss_pred c-C-CCCCCc-EEEEeecCcccCCC--------cc---eeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 79 T-P-YDSGPY-LIAWFKDGRQIPGR--------TS---STSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 79 ~-~-p~~~~~-~~~w~~~~~~~~~~--------~~---~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
. . | .+ .+.|++++..+... .. .+.|.|.....++ |.|.|.+.|..|
T Consensus 143 ~g~~P---~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~ 202 (210)
T 3d9a_H 143 KGYFP---EPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPAS 202 (210)
T ss_dssp EEEBS---SCCEEEEGGGTBCTTEEECCCEEETTEEEEEEEEEEEGGGTTT-SCCEEEEEEGGG
T ss_pred eeEec---CCcEEEEeeCCcccceEEcCCccCCCcEEEEEEEEEcHHHcCC-CcEEEEEEeCCC
Confidence 8 4 8 77 99999987653210 00 3457888777766 999999999887
No 177
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.63 E-value=3.8e-15 Score=96.88 Aligned_cols=116 Identities=20% Similarity=0.265 Sum_probs=81.0
Q ss_pred CceEEeC------CeEEEcCCCCCCCeEEEEEeccC---------CcceeEEEEEEEec---------------CceEEe
Q psy11131 10 PRTRVLG------PILAIEGVTAEDSGTYRCSSSNI---------GGEATAEVRLQVST---------------PYRVDV 59 (150)
Q Consensus 10 ~~~~~~~------~~l~i~~~~~~d~G~Y~C~~~~~---------~~~~~~~~~l~v~~---------------~~~~~~ 59 (150)
.|+.+.. .+|.|.+++.+|+|.|.|.+.+. .........|.|.. ++.+..
T Consensus 66 ~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~~ 145 (280)
T 3fku_X 66 GRVTITADQSTRTAYMDLRSLRSEDTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLTQ 145 (280)
T ss_dssp TTCEEEEETTTTEEEEEECSCCSTTCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBBC
T ss_pred CcEEEEEeCCCCEEEEEECCCChhhCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEEe
Confidence 5666652 37999999999999999999876 11223345677765 333334
Q ss_pred CCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecC--cccC------------CCcc--------eeeEEEccCCCCCC
Q psy11131 60 NPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDG--RQIP------------GRTS--------STSLVINPVGREDR 116 (150)
Q Consensus 60 ~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~--~~~~------------~~~~--------~~~l~~~~~~~~~~ 116 (150)
.+. ..+.+|+.+.|.|.+. .+.. .+.+.|++.. ..+. ...+ ...|.|.++..+|+
T Consensus 146 ~p~-~~v~~G~~v~L~C~~~~~~~~-~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~Ds 223 (280)
T 3fku_X 146 PPS-VSKGLRQTATLTCTGNSNNVG-NQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITGLQPEDE 223 (280)
T ss_dssp CSE-EEECTTCCEEEEEECCCCCCC-TTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECSCCGGGC
T ss_pred CCc-EEEecCCCEEEEEEecCCCCC-CceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECCCCHHHC
Confidence 444 7889999999999987 3310 3789998732 2111 0000 34599999999999
Q ss_pred ceEEEEEEeCC
Q psy11131 117 GIYQCIARRSD 127 (150)
Q Consensus 117 g~y~C~~~~~~ 127 (150)
|.|.|.+.+..
T Consensus 224 G~Y~C~~~~~~ 234 (280)
T 3fku_X 224 ADYYCSTWDSS 234 (280)
T ss_dssp SEEEEEEEETT
T ss_pred EEEEEEEecCC
Confidence 99999999865
No 178
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.63 E-value=3.3e-15 Score=83.11 Aligned_cols=87 Identities=17% Similarity=0.304 Sum_probs=72.2
Q ss_pred ecCceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCcc--------eeeEEEccCCCCCCceEEEE
Q psy11131 52 STPYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRTS--------STSLVINPVGREDRGIYQCI 122 (150)
Q Consensus 52 ~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~~--------~~~l~~~~~~~~~~g~y~C~ 122 (150)
..+|.+...+....+.+|+.+.|.|.+. .| .+.+.|++++..+..... ...|.|.++..+|.|.|.|.
T Consensus 6 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p---~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~ 82 (103)
T 3qp3_A 6 DHAPRITLRMRSHRVPCGQNTRFILNVQSKP---TAEVKWYHNGVELQESSKIHYTNTSGVLTLEILDCHTDDSGTYRAV 82 (103)
T ss_dssp CEEEEEEECCCCEEEETTCCEEEEEEEEEES---CCEEEEEETTEECCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEE
T ss_pred CCCCEEEeCCcceEEeCCCeEEEEEEEEecC---CCEEEEEECCEECCCCCCEEEEECCCEEEEEEcCCCcccCEEEEEE
Confidence 3455666667778899999999999999 88 899999999887765433 34799999999999999999
Q ss_pred EEeCCCCceeeeEEEEEcCc
Q psy11131 123 ARRSDGDVAQGSAELQLGGT 142 (150)
Q Consensus 123 ~~~~~g~~~~~~~~l~v~~~ 142 (150)
+.|..| ..+..+.|.|.+.
T Consensus 83 a~N~~G-~~~~~~~l~V~~~ 101 (103)
T 3qp3_A 83 CTNYKG-EASDYATLDVTGG 101 (103)
T ss_dssp EEETTE-EEEEEEEEEEECC
T ss_pred EEeCCC-cEEEEEEEEEECC
Confidence 999999 5778888888764
No 179
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.63 E-value=6.5e-15 Score=96.27 Aligned_cols=107 Identities=21% Similarity=0.372 Sum_probs=78.3
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCC-c--c--eeEEEEEEEec----------------CceEEeCCCcEEEecCCcEEEE
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIG-G--E--ATAEVRLQVST----------------PYRVDVNPPLLSVHLDGSANFQ 75 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~-~--~--~~~~~~l~v~~----------------~~~~~~~~~~~~~~~g~~~~l~ 75 (150)
.+|.|.+++.+|+|.|.|.+.+.. + . ....+.|.|.. ++.+...+....+.+|+.+.|.
T Consensus 101 ~sL~I~~v~~~DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~ 180 (291)
T 2gki_A 101 AYMELSSLTSEDSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQSPSSLAVSAGEKVTMS 180 (291)
T ss_dssp EEEEECSCCGGGCEEEEEEEECGGGTTCEEEECCCEEEEECC----------------CCCEECSCSEEEEETTSCEEEE
T ss_pred EEEEECcCCHHHCEEEEEEEeccccccccceeCCCcEEEEecCCccccccccCCCCCccceEEcCCCEEEEcCCCcEEEE
Confidence 479999999999999999998763 1 1 11235677776 2233444556778999999999
Q ss_pred EEec-CCCCCCc------EEEEeecC--cccC----C--------Ccc--------eeeEEEccCCCCCCceEEEEEEeC
Q psy11131 76 CEIT-PYDSGPY------LIAWFKDG--RQIP----G--------RTS--------STSLVINPVGREDRGIYQCIARRS 126 (150)
Q Consensus 76 C~~~-~p~~~~~------~~~w~~~~--~~~~----~--------~~~--------~~~l~~~~~~~~~~g~y~C~~~~~ 126 (150)
|.+. .+ .+ .+.|+++. .... . ..+ ...|.|.++..+|+|.|.|.+.+.
T Consensus 181 C~~~~~~---~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~ 257 (291)
T 2gki_A 181 CKSSQSL---FNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCKQSYY 257 (291)
T ss_dssp EEESSCC---EETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred EEcCCcc---ccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEEEECCCCHHHCEEEEEEEccC
Confidence 9998 66 54 89999863 2110 0 111 247999999999999999999985
No 180
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.63 E-value=2.1e-14 Score=90.19 Aligned_cols=115 Identities=14% Similarity=0.206 Sum_probs=81.4
Q ss_pred CCceEEeC------CeEEEcCCCCCCCeEEEEEeccCC--cceeEEEEEEEec----CceEE-eCCCcEEEecCCcEEEE
Q psy11131 9 GPRTRVLG------PILAIEGVTAEDSGTYRCSSSNIG--GEATAEVRLQVST----PYRVD-VNPPLLSVHLDGSANFQ 75 (150)
Q Consensus 9 ~~~~~~~~------~~l~i~~~~~~d~G~Y~C~~~~~~--~~~~~~~~l~v~~----~~~~~-~~~~~~~~~~g~~~~l~ 75 (150)
..|+.+.. .+|.|.+++.+|+|.|.|.+.+.. ......+.|.|.. +|.+. ..+... .+|+.+.|.
T Consensus 67 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~--~~g~~v~L~ 144 (221)
T 3m8o_H 67 RGRLTISRDDSKNTAFLQMNSLKSDDTAMYYCVIRGDVYNRQWGQGTLVTVSSASPTSPKVFPLSLCST--QPDGNVVIA 144 (221)
T ss_dssp TTSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEESCTTCCCBBCCEEEEECSCCCBCCEEEEEECCSC--CCTTEEEEE
T ss_pred cccEEEEecCCCCEEEEEECCCCHHHCEEEEEEEECCChhheECCCEEEEEecCCCCCCeEEEecCccc--ccCCCEEEE
Confidence 36776653 259999999999999999998753 2223345677762 23333 222222 688999999
Q ss_pred EEec--CCCCCC--cEEEEeecCcccC----------CCcc---eeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 76 CEIT--PYDSGP--YLIAWFKDGRQIP----------GRTS---STSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 76 C~~~--~p~~~~--~~~~w~~~~~~~~----------~~~~---~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
|.+. .| . +.+.|++++..+. .... .+.|.+......|.|.|+|.+.+..+
T Consensus 145 C~~~~~~P---~~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~ytC~v~~~~~ 211 (221)
T 3m8o_H 145 CLVQGFFP---QEPLSVTWSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTN 211 (221)
T ss_dssp EEEEEEBS---SCSEEEEESCCSTTCEEEECCCEECSSSSCEEEEEEEEEEGGGSCTTCEEEEEEEETTS
T ss_pred EEEEeeEC---CCCEEEEEEECCEECceEEcCceeeCCCCcEEEEEEEEECHHHcCCCCeEEEEEEECCC
Confidence 9998 55 4 4899999887651 1211 34688888888899999999999876
No 181
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.63 E-value=2.3e-15 Score=99.58 Aligned_cols=109 Identities=20% Similarity=0.334 Sum_probs=79.4
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcc-----eeEEEEEEEecCce--EEeCCCcEEEecCCcEEEEEEec-CCCCCCc--
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGE-----ATAEVRLQVSTPYR--VDVNPPLLSVHLDGSANFQCEIT-PYDSGPY-- 86 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~-----~~~~~~l~v~~~~~--~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~-- 86 (150)
.+|.|.+++.+|+|.|+|.+.+..+. ....+.|.|..++. ....+ ...+.+|+.+.|.|.+. .| ++
T Consensus 74 ~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~p~~p~i~~~-~~~~~~g~~~~l~C~~~g~p---~~~~ 149 (327)
T 2wng_A 74 FSISISNITPADAGTYYCVKFRKGSPDTEFKSGAGTELSVRAKPSAPVVSGP-AARATPQHTVSFTCESHGFS---PRDI 149 (327)
T ss_dssp CCEEECSCCGGGCEEEEEEEEESSTTCEEEEECCCEEEEEEBCCCCCEEECC-SSCBCTTCEEEEEEEEEEEB---SSCC
T ss_pred eEEEEccCccccCeEEEEEeecCCCcceeEeecCcEEEEEEecCCCceeecc-ccccCCCCEEEEEEEEeCcc---CCCc
Confidence 57999999999999999999987543 12346777875432 12222 34567899999999998 55 44
Q ss_pred EEEEeecCcccCCCcc-------------eeeEEEccCCCCCCceEEEEEEeCCCC
Q psy11131 87 LIAWFKDGRQIPGRTS-------------STSLVINPVGREDRGIYQCIARRSDGD 129 (150)
Q Consensus 87 ~~~w~~~~~~~~~~~~-------------~~~l~~~~~~~~~~g~y~C~~~~~~g~ 129 (150)
.+.|++++..+..... .+.|.+.....++.|.|.|.+.|..+.
T Consensus 150 ~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~ 205 (327)
T 2wng_A 150 TLKWFKNGNELSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQ 205 (327)
T ss_dssp EEEEEETTEECCCEEEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSC
T ss_pred EEEEEECCEEccccccccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccC
Confidence 9999999877653321 235666666666789999999998763
No 182
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.63 E-value=2.4e-15 Score=94.41 Aligned_cols=121 Identities=16% Similarity=0.147 Sum_probs=83.2
Q ss_pred CCceEEeC------CeEEEcCCCCCCCeEEEEEeccCCcce---eEEEEEEEec----CceEEeCCCcEEEecCCcEEEE
Q psy11131 9 GPRTRVLG------PILAIEGVTAEDSGTYRCSSSNIGGEA---TAEVRLQVST----PYRVDVNPPLLSVHLDGSANFQ 75 (150)
Q Consensus 9 ~~~~~~~~------~~l~i~~~~~~d~G~Y~C~~~~~~~~~---~~~~~l~v~~----~~~~~~~~~~~~~~~g~~~~l~ 75 (150)
..|+.+.. .+|.|.+++.+|+|.|.|.+.+..+.. ...+.|.|.. +|.+...+....+.+|+.+.|.
T Consensus 67 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~ 146 (220)
T 1pz5_B 67 KGRFTISRDDSKSSVYLQMNNLRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSSATTTAPSVYPLVPGCSDTSGSSVTLG 146 (220)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCSCCSCSSSEEEE
T ss_pred CCcEEEEEeCCCCeEEEEEccCCHHHCEEEEEEEecCCcccceECCCEEEEEccCCCCCCeEEEcccccccCCCCcEEEE
Confidence 35776642 389999999999999999998864321 1346777763 3333332222234679999999
Q ss_pred EEec-C-CCCCCc-EEEEeecCccc-----CC---Ccc---eeeEEEccCCCCCCceEEEEEEeCCCCceeee
Q psy11131 76 CEIT-P-YDSGPY-LIAWFKDGRQI-----PG---RTS---STSLVINPVGREDRGIYQCIARRSDGDVAQGS 134 (150)
Q Consensus 76 C~~~-~-p~~~~~-~~~w~~~~~~~-----~~---~~~---~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~ 134 (150)
|.+. . | .| .+.|++++... .. ... .+.|.|.....++ |.|.|.|.|..| ....+
T Consensus 147 C~~~g~~P---~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~-~~~~~ 214 (220)
T 1pz5_B 147 CLVKGYFP---EPVTVKWNYGALSSGVRTVSSVLQSGFYSLSSLVTVPSSTWPS-QTVICNVAHPAS-KVDLI 214 (220)
T ss_dssp EEEEEEBS---SCCEEEEGGGTCCTTEEECCCEEETTEEEEEEEEEECGGGTTT-SCCEEEEEEGGG-TEEEE
T ss_pred EEEEEEeC---CCeEEEEecCCcccceEEcCCcccCCeEEEEEEEEEcchhcCC-ceEEEEEEECCc-cEeee
Confidence 9998 5 8 78 99999887631 10 011 3567887777766 999999999887 34443
No 183
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.62 E-value=2.7e-15 Score=94.80 Aligned_cols=115 Identities=17% Similarity=0.209 Sum_probs=78.2
Q ss_pred CceEEeC------CeEEEcCCCCCCCeEEEEEeccCCc------c---eeEEEEEEEec----CceEEeCCCcEEEecCC
Q psy11131 10 PRTRVLG------PILAIEGVTAEDSGTYRCSSSNIGG------E---ATAEVRLQVST----PYRVDVNPPLLSVHLDG 70 (150)
Q Consensus 10 ~~~~~~~------~~l~i~~~~~~d~G~Y~C~~~~~~~------~---~~~~~~l~v~~----~~~~~~~~~~~~~~~g~ 70 (150)
.|+.+.. .+|.|.+++.+|+|.|.|.+.+..+ . ....+.|.|.. +|.+...+....+.+|+
T Consensus 67 ~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~ 146 (228)
T 3bae_H 67 SRLTISKDTSRDMVFMKITSVDTADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGS 146 (228)
T ss_dssp GGEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCCCBCCEEEEECC-----CCS
T ss_pred CcEEEEEcCCCCeEEEEEcCCCcccCEEEEEEEecCCCccccccceeeeCCcEEEEecCCCCCCCEEEEecccccccCCC
Confidence 5666642 5899999999999999999987643 1 11236788873 33443322223356899
Q ss_pred cEEEEEEec-C-CCCCCc-EEEEeecCcccCCC--------cc---eeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 71 SANFQCEIT-P-YDSGPY-LIAWFKDGRQIPGR--------TS---STSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 71 ~~~l~C~~~-~-p~~~~~-~~~w~~~~~~~~~~--------~~---~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
.+.|.|.+. . | .+ .+.|++++..+... .. ...|.|.....++ |.|+|.+.|..+
T Consensus 147 ~~~l~C~~~g~~P---~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~-g~YtC~~~n~~~ 214 (228)
T 3bae_H 147 SVTLGCLVKGYFP---EPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-ESITCNVAHPAS 214 (228)
T ss_dssp EEEEEEEEEEEBS---SCCEEEEGGGTCCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGG
T ss_pred CEEEEEEEccEeC---CCEEEEEeeCCcccCceEcCceeCCCcEEEEEEEEEEhhhcCC-CcEEEEEEECCC
Confidence 999999998 4 7 66 99999987643210 10 3457777777655 999999999877
No 184
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.62 E-value=9.2e-15 Score=93.22 Aligned_cols=117 Identities=21% Similarity=0.250 Sum_probs=80.0
Q ss_pred CCceEEeC----CeEEEcCCCCCCCeEEEEEeccCCcc-eeEEEEEEEecCc-------------eEEeCCCcEEEecCC
Q psy11131 9 GPRTRVLG----PILAIEGVTAEDSGTYRCSSSNIGGE-ATAEVRLQVSTPY-------------RVDVNPPLLSVHLDG 70 (150)
Q Consensus 9 ~~~~~~~~----~~l~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~~l~v~~~~-------------~~~~~~~~~~~~~g~ 70 (150)
..|+.+.. .+|.|.+++.+|+|.|.|.+.+..+. ....+.|.|..++ .....+....+.+|+
T Consensus 64 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~ 143 (247)
T 1svz_A 64 PDRFSGSGSGTDFTLKISRVEAEDLGIYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQSGPELKKPGE 143 (247)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEECCCEEECTTC
T ss_pred CCcEEeccCCCEEEEEECCCCHHHCEEEEEEEccCCccEECCCEEEEEECCccccccccccccCceEEeCCCceeecCCC
Confidence 35666543 37999999999999999999886443 2234577777542 122223334588999
Q ss_pred cEEEEEEec-CCCCCCcEEEEeecC--ccc------CC-----------Ccc----------eeeEEEccCCCCCCceEE
Q psy11131 71 SANFQCEIT-PYDSGPYLIAWFKDG--RQI------PG-----------RTS----------STSLVINPVGREDRGIYQ 120 (150)
Q Consensus 71 ~~~l~C~~~-~p~~~~~~~~w~~~~--~~~------~~-----------~~~----------~~~l~~~~~~~~~~g~y~ 120 (150)
.+.|.|.+. .+.. .+.+.|+++. ... .. ..+ ...|.|.++..+|+|.|.
T Consensus 144 ~v~L~C~~~~~~~~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~ 222 (247)
T 1svz_A 144 TVKISCKATNYAFT-DYSMHWVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNEDTATYF 222 (247)
T ss_dssp CEEEEEEEESSCGG-GSCEEEEEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCGGGCEEEE
T ss_pred cEEEEEEEcCcccC-CcEEEEEEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCChhHCEEEE
Confidence 999999998 5300 4689999853 111 00 111 248999999999999999
Q ss_pred EEEEeC
Q psy11131 121 CIARRS 126 (150)
Q Consensus 121 C~~~~~ 126 (150)
|.+.|.
T Consensus 223 C~a~n~ 228 (247)
T 1svz_A 223 CVRDRH 228 (247)
T ss_dssp EEEEEG
T ss_pred EEEecc
Confidence 999985
No 185
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.62 E-value=5.8e-15 Score=94.67 Aligned_cols=126 Identities=14% Similarity=0.175 Sum_probs=82.6
Q ss_pred CCceEEeC------CeEEEcCCCCCCCeEEEEEeccCC----cceeEEEEEEEe----cCceEEeCCCcEEEecCCcEEE
Q psy11131 9 GPRTRVLG------PILAIEGVTAEDSGTYRCSSSNIG----GEATAEVRLQVS----TPYRVDVNPPLLSVHLDGSANF 74 (150)
Q Consensus 9 ~~~~~~~~------~~l~i~~~~~~d~G~Y~C~~~~~~----~~~~~~~~l~v~----~~~~~~~~~~~~~~~~g~~~~l 74 (150)
.+|+.+.. .+|.|.+++.+|+|.|.|.+.+.. ......+.|.|. .+|.+...+....+..|+.+.|
T Consensus 65 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L 144 (253)
T 3liz_H 65 KGRFTISRDNAKNTLFLQMSSLKSEDTAMYYCTRDPAGRAWFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTL 144 (253)
T ss_dssp TTTCEEEEEGGGTEEEEEECSCCGGGCEEEEEEECCBTTTBCCEECCCEEEEECSSCCBCCEEEEECC------CCEEEE
T ss_pred CCcEEEEEeCCCCEEEEEECCCChhhCEEEEEEEecCCcceeeEECCCEEEEEeccCCCCCeEEEecCCcccCCCCcEEE
Confidence 35666653 349999999999999999998752 222334577776 2344442233334557999999
Q ss_pred EEEec--CCCCCCc-EEEEeecCcccC--------CCcc---eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEE
Q psy11131 75 QCEIT--PYDSGPY-LIAWFKDGRQIP--------GRTS---STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQL 139 (150)
Q Consensus 75 ~C~~~--~p~~~~~-~~~w~~~~~~~~--------~~~~---~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v 139 (150)
.|.+. .| .+ .+.|.+++..+. .... .+.|.+.....+| |.|+|.+.+..+ .......+.+
T Consensus 145 ~C~~~g~~P---~~~~v~W~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-g~ytC~v~~~~~-~~~~~~~~~~ 218 (253)
T 3liz_H 145 GCLVKGYFP---EPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPAS-STKVDKKIVP 218 (253)
T ss_dssp EEEEEEEBS---SCCEEEEGGGTBCTTEEECCCEEETTEEEEEEEEEEETTSTTT-SCCEEEEEEGGG-TEEEEEECCC
T ss_pred EEEEeeEeC---CCeEEEEEeCCeecceEeCCccccCCeEEEEEEEEEcHHHCCC-ceEEEEEEECCC-CcceEEEecC
Confidence 99998 56 55 899999876321 0011 3578888888888 999999999876 3444444443
No 186
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.62 E-value=2.4e-14 Score=90.73 Aligned_cols=126 Identities=15% Similarity=0.176 Sum_probs=80.5
Q ss_pred CCceEEeC------CeEEEcCCCCCCCeEEEEEeccCC--c----ceeEEEEEEEec----CceEEe-CCCcEEEecC-C
Q psy11131 9 GPRTRVLG------PILAIEGVTAEDSGTYRCSSSNIG--G----EATAEVRLQVST----PYRVDV-NPPLLSVHLD-G 70 (150)
Q Consensus 9 ~~~~~~~~------~~l~i~~~~~~d~G~Y~C~~~~~~--~----~~~~~~~l~v~~----~~~~~~-~~~~~~~~~g-~ 70 (150)
..|+.+.. .+|.|.+++.+|+|.|.|.+.+.. + .....+.|.|.. +|.+.. .+. .....| +
T Consensus 64 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~-~~~~~g~~ 142 (232)
T 1dn0_B 64 KSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARPPHDTSGHYWNYWGQGTLVTVSSGSASAPTLFPLVSC-ENSPSDTS 142 (232)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECSSTTSCSCCSEECCCEEEEECSSCCBCCEEEEEECC-------CC
T ss_pred CCeEEEEEeCCCCEEEEEECCCCcccCEEEEEEEecCCcCCchhhhcccceEEEEccCCCCCCceEEeccc-cccCCCCC
Confidence 46777652 289999999999999999998321 1 112345788875 233322 222 223467 8
Q ss_pred cEEEEEEec--CCCCCCc-EEEEee-cCcccCC---------Ccc---eeeEEEccCCC--CCCceEEEEEEeCCCCcee
Q psy11131 71 SANFQCEIT--PYDSGPY-LIAWFK-DGRQIPG---------RTS---STSLVINPVGR--EDRGIYQCIARRSDGDVAQ 132 (150)
Q Consensus 71 ~~~l~C~~~--~p~~~~~-~~~w~~-~~~~~~~---------~~~---~~~l~~~~~~~--~~~g~y~C~~~~~~g~~~~ 132 (150)
.+.|.|.+. .| .+ .+.|++ ++..+.. ... .+.|.|..... +|.|.|.|.+.|..+ ...
T Consensus 143 ~v~L~C~~~g~~P---~p~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~ytC~v~n~~~-~~~ 218 (232)
T 1dn0_B 143 SVAVGCLAQDFLP---DSITFSWKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVMAGTDEHVVCKVQHPNG-NKE 218 (232)
T ss_dssp SEEEEEEEEEEBS---SCCEEEEEETTSCEECCEEECCCEEETTEEEEEEEEEECTTCC---CCCEEEEEEECTTC-CEE
T ss_pred cEEEEEEEEEEeC---CCeEEEEEcCCCCceeeEEECCccccCCcEEEEEEEEEcHHHhcccCCCeEEEEEEeCCC-Ccc
Confidence 999999998 47 66 999999 7766532 011 34677777765 778999999999887 333
Q ss_pred eeEEEEE
Q psy11131 133 GSAELQL 139 (150)
Q Consensus 133 ~~~~l~v 139 (150)
....+.+
T Consensus 219 ~~~~i~~ 225 (232)
T 1dn0_B 219 KNVPLPV 225 (232)
T ss_dssp EEEECCC
T ss_pred eeEecCC
Confidence 4444443
No 187
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.61 E-value=2.7e-15 Score=102.72 Aligned_cols=116 Identities=25% Similarity=0.328 Sum_probs=84.3
Q ss_pred CceEEeC----CeEEEcCCCCCCCeEEEEEeccCCcce-eEEEEEEEec---CceEEeCCCcEEEecCCcEEEEEEec--
Q psy11131 10 PRTRVLG----PILAIEGVTAEDSGTYRCSSSNIGGEA-TAEVRLQVST---PYRVDVNPPLLSVHLDGSANFQCEIT-- 79 (150)
Q Consensus 10 ~~~~~~~----~~l~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~v~~---~~~~~~~~~~~~~~~g~~~~l~C~~~-- 79 (150)
.|+.+.. .+|.|.+++.+|+|.|+|.+.+..+.. ...+.|.|.. +|.+...+......+|..+.|.|.+.
T Consensus 64 ~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~ 143 (438)
T 1qgc_4 64 DRFSGSGSRTDFTLTIDPVEADDVATYYCQQSNEVPLTFGAGTKLDLKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNF 143 (438)
T ss_dssp TTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSTTCCBCCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEE
T ss_pred CcEEEEccCCcEEEEeCCCcCcCCeeEEEEEecCCCccccCceeEEecCCCCCCEEEecCCChhhccCCceEEEEEEccc
Confidence 5665542 479999999999999999999876532 3445667753 34444322222223578899999997
Q ss_pred CCCCCCc-EEEEeecCcccCCCc------------c---eeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 80 PYDSGPY-LIAWFKDGRQIPGRT------------S---STSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 80 ~p~~~~~-~~~w~~~~~~~~~~~------------~---~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
.| .+ .+.|++++..+.... . ...|.|..+..+|.|.|.|.+.|..+
T Consensus 144 ~p---~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~ 205 (438)
T 1qgc_4 144 YP---KDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTS 205 (438)
T ss_dssp BS---SCEEEEEEETTEEECTTEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTC
T ss_pred cC---CCcEEEEEECCEEcCCCceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEeccc
Confidence 56 66 999999987665430 0 34788999999999999999999877
No 188
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.61 E-value=1.4e-14 Score=81.12 Aligned_cols=87 Identities=23% Similarity=0.389 Sum_probs=71.5
Q ss_pred cCceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCcc--------eeeEEEccCCCCCCceEEEEE
Q psy11131 53 TPYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRTS--------STSLVINPVGREDRGIYQCIA 123 (150)
Q Consensus 53 ~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~~--------~~~l~~~~~~~~~~g~y~C~~ 123 (150)
.+|.+...+....+.+|+.+.|.|.+. .| .+.+.|++++..+..... ...|.|.++..+|.|.|.|.+
T Consensus 12 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p---~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a 88 (107)
T 3irg_B 12 SPPCFLRFPRPVRVVSGAEAELKCVVLGEP---PPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRA 88 (107)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEES---CCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCeeEcCCccEEEeCCCeEEEEEEEeecC---CCEEEEEECCeECCCCCcEEEEeCCCEEEEEEccCCHHhCEEEEEEE
Confidence 456666677778899999999999999 88 889999999887654433 237999999999999999999
Q ss_pred EeCCCCceeeeEEEEEcCcC
Q psy11131 124 RRSDGDVAQGSAELQLGGTR 143 (150)
Q Consensus 124 ~~~~g~~~~~~~~l~v~~~p 143 (150)
.|..| .....+.|.|.++|
T Consensus 89 ~n~~g-~~~~~~~l~V~~~P 107 (107)
T 3irg_B 89 RNAAG-EAYAAAAVTVLEPP 107 (107)
T ss_dssp EETTE-EEEEEEEEEEEC--
T ss_pred EcCCC-cEEEEEEEEEEcCC
Confidence 99998 57788888888765
No 189
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.61 E-value=1.4e-14 Score=80.16 Aligned_cols=86 Identities=30% Similarity=0.520 Sum_probs=71.3
Q ss_pred CceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCcc------eeeEEEccCCCCCCceEEEEEEeC
Q psy11131 54 PYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRTS------STSLVINPVGREDRGIYQCIARRS 126 (150)
Q Consensus 54 ~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~~------~~~l~~~~~~~~~~g~y~C~~~~~ 126 (150)
+|.+...+....+.+|+.+.|.|.+. .| .+.+.|++++..+..... ...|.|.++..+|.|.|.|.+.|.
T Consensus 8 ~P~i~~~p~~~~v~~G~~~~l~C~~~g~p---~p~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~ 84 (100)
T 2edj_A 8 PPIILQGPANQTLAVDGTALLKCKATGDP---LPVISWLKEGFTFPGRDPRATIQEQGTLQIKNLRISDTGTYTCVATSS 84 (100)
T ss_dssp SCEEEECCCCEEEESSSEEEECCEEECSS---CCEEEEEESSSEESSSCSSCEECTTCCEEEESCCTTTCCEEEEEEECS
T ss_pred CCEEEeCcCCEEEcCCCcEEEEEEEEEcC---CCEEEEEECCEECCCCCCCEEEcCCCEEEEccCCcccCEEEEEEEEcC
Confidence 45666667778889999999999999 88 899999999877653211 457999999999999999999999
Q ss_pred CCCceeeeEEEEEcCcC
Q psy11131 127 DGDVAQGSAELQLGGTR 143 (150)
Q Consensus 127 ~g~~~~~~~~l~v~~~p 143 (150)
.| .....+.|.|.++|
T Consensus 85 ~g-~~~~~~~l~V~~~~ 100 (100)
T 2edj_A 85 SG-ETSWSAVLDVTESG 100 (100)
T ss_dssp SC-CCBCCEEEEEESCC
T ss_pred CC-CEEEEEEEEEecCC
Confidence 98 56788888887754
No 190
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.61 E-value=1.5e-14 Score=91.05 Aligned_cols=118 Identities=12% Similarity=0.155 Sum_probs=81.1
Q ss_pred CCceEEeC------CeEEEcCCCCCCCeEEEEEeccCCc------ceeEEEEEEEec----CceEEeCCCcEEEecCCcE
Q psy11131 9 GPRTRVLG------PILAIEGVTAEDSGTYRCSSSNIGG------EATAEVRLQVST----PYRVDVNPPLLSVHLDGSA 72 (150)
Q Consensus 9 ~~~~~~~~------~~l~i~~~~~~d~G~Y~C~~~~~~~------~~~~~~~l~v~~----~~~~~~~~~~~~~~~g~~~ 72 (150)
+.|+.+.. .+|.|.+++.+|+|.|.|.+.+..+ .....+.|.|.. +|.+...+....+.+|+.+
T Consensus 65 ~~R~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v 144 (223)
T 1dee_B 65 KGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGSASAPTLFPLVSCENSNPSSTV 144 (223)
T ss_dssp BTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEESSSSTTCCEEEECCCEEEEECSSCCBCCEEEEEECTTCCCSSSEE
T ss_pred CCeEEEEecCCCCEEEEEECCCCHHHCEEEEEEEeccccCcccceeecCcEEEEEccCCCCCCEEEEecCCcccCCCCcE
Confidence 36777653 4799999999999999999987642 112335788873 2333221111123578999
Q ss_pred EEEEEec--CCCCCCc-EEEEee-cCcccCC---------Ccc---eeeEEEccCCC--CCCceEEEEEEeCCCC
Q psy11131 73 NFQCEIT--PYDSGPY-LIAWFK-DGRQIPG---------RTS---STSLVINPVGR--EDRGIYQCIARRSDGD 129 (150)
Q Consensus 73 ~l~C~~~--~p~~~~~-~~~w~~-~~~~~~~---------~~~---~~~l~~~~~~~--~~~g~y~C~~~~~~g~ 129 (150)
.|.|.+. .| .+ .+.|++ ++..+.. ... .+.|.+..... +|.|.|.|.+.|..+.
T Consensus 145 ~L~C~~~g~~P---~p~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~y~C~v~n~~~~ 216 (223)
T 1dee_B 145 AVGCLAQDFLP---DSITFSWKYKNNSDISSTRGFPSVLRGGKYAATSQVLLPSKDVAQGTNEHVVCKVQHPNGN 216 (223)
T ss_dssp EEEEEEEEEBS---SCCEEEEEETTSCBCSCEEECCCEEETTEEEEEEEEEEECTTTTSTTCCEEEEEEECTTCC
T ss_pred EEEEEEEEEeC---CCeEEEeEccCCCccceeEECCccccCCeEEEEEEEEEcHHHhccCCCCEEEEEEEeCCCC
Confidence 9999998 47 66 999999 8776542 011 34577766655 6789999999998873
No 191
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.61 E-value=9.9e-15 Score=92.95 Aligned_cols=117 Identities=20% Similarity=0.223 Sum_probs=79.2
Q ss_pred CCceEEeC----CeEEEcCCCCCCCeEEEEEeccCCcc-eeEEEEEEEecCce-------------EEeCCCcEEEecCC
Q psy11131 9 GPRTRVLG----PILAIEGVTAEDSGTYRCSSSNIGGE-ATAEVRLQVSTPYR-------------VDVNPPLLSVHLDG 70 (150)
Q Consensus 9 ~~~~~~~~----~~l~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~~l~v~~~~~-------------~~~~~~~~~~~~g~ 70 (150)
+.|+.+.. .+|.|.+++.+|+|.|.|.+.+..+. ....+.|.|..++. ....+....+.+|+
T Consensus 59 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~ 138 (242)
T 2znx_A 59 PSRFSGSGSGTDFTLSINSVETEDFGMYFCQQSNSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQESGPSLVKPSQ 138 (242)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEEECCSEECTTS
T ss_pred CCCEEEecCCCEEEEEECCCChHHCEEEEEeEecCCceEECCCEEEEEcCCCCCCcccccccccceeeecCCcceecCCC
Confidence 45666542 47999999999999999999986442 22345777776432 12222234588999
Q ss_pred cEEEEEEec-CCCCCCcEEEEeecC--cccC-------C---------Ccc----------eeeEEEccCCCCCCceEEE
Q psy11131 71 SANFQCEIT-PYDSGPYLIAWFKDG--RQIP-------G---------RTS----------STSLVINPVGREDRGIYQC 121 (150)
Q Consensus 71 ~~~l~C~~~-~p~~~~~~~~w~~~~--~~~~-------~---------~~~----------~~~l~~~~~~~~~~g~y~C 121 (150)
.+.|.|.+. .|.. .+.+.|++.. ..+. . ..+ ...|.|.++..+|+|.|.|
T Consensus 139 ~v~L~C~~~g~~~~-~~~v~W~k~~~~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 217 (242)
T 2znx_A 139 TLSLTCSVTGDSIT-SDYXSXIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTATYYC 217 (242)
T ss_dssp CEEEEEEEESSCGG-GSCEEEEEECTTSCEEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGGGCEEEEE
T ss_pred eEEEEEEEEccccC-CcceeeEeeCCCCCcEEEEEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcCcCEEEEE
Confidence 999999998 5400 4789999842 2110 0 111 2479999999999999999
Q ss_pred EEEeC
Q psy11131 122 IARRS 126 (150)
Q Consensus 122 ~~~~~ 126 (150)
.+.+.
T Consensus 218 ~a~~~ 222 (242)
T 2znx_A 218 ANXDG 222 (242)
T ss_dssp EETTS
T ss_pred eccCC
Confidence 99874
No 192
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.61 E-value=1.8e-14 Score=91.95 Aligned_cols=116 Identities=19% Similarity=0.205 Sum_probs=79.4
Q ss_pred CCceEEeC----CeEEEcCCCCCCCeEEEEEeccCCcc-eeEEEEEEEecC-------------------ceEEeCCCcE
Q psy11131 9 GPRTRVLG----PILAIEGVTAEDSGTYRCSSSNIGGE-ATAEVRLQVSTP-------------------YRVDVNPPLL 64 (150)
Q Consensus 9 ~~~~~~~~----~~l~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~~l~v~~~-------------------~~~~~~~~~~ 64 (150)
..|+.... .+|.|.+++.+|+|.|.|.+.+..+. ......|.|..+ +.....+...
T Consensus 62 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (250)
T 3esu_F 62 PSRFSGSGSGTDYSLTISNLEQEDIGTYFCQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPE 141 (250)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC------------------------CEECCCE
T ss_pred CCCEEEeCCCCEEEEEEccCChhhCEEEEEEEeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEecCCce
Confidence 35555433 37999999999999999999886543 223456777653 1222334556
Q ss_pred EEecCCcEEEEEEec-CCCCCCcEEEEeec--CcccCCC-----------------cc----------eeeEEEccCCCC
Q psy11131 65 SVHLDGSANFQCEIT-PYDSGPYLIAWFKD--GRQIPGR-----------------TS----------STSLVINPVGRE 114 (150)
Q Consensus 65 ~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~--~~~~~~~-----------------~~----------~~~l~~~~~~~~ 114 (150)
.+.+|+.+.|.|.+. .+.. .+.+.|+++ +..+... .+ ...|.|.++..+
T Consensus 142 ~v~~G~~v~L~C~~~~~~~~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~ 220 (250)
T 3esu_F 142 LVKPGASVKISCKDSGYAFS-SSWMNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSV 220 (250)
T ss_dssp EECTTCCEEEEEECCSTTGG-GSEEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGG
T ss_pred EEcCCceEEEEEEecCCccc-CCEEEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCcc
Confidence 788999999999987 3311 579999986 3322100 00 236999999999
Q ss_pred CCceEEEEEEe
Q psy11131 115 DRGIYQCIARR 125 (150)
Q Consensus 115 ~~g~y~C~~~~ 125 (150)
|+|.|.|.+.+
T Consensus 221 DsG~Y~C~~~~ 231 (250)
T 3esu_F 221 DSAVYFCARSG 231 (250)
T ss_dssp GCEEEEEEEEC
T ss_pred cCEEEEEEEec
Confidence 99999999996
No 193
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.61 E-value=6.8e-15 Score=94.30 Aligned_cols=116 Identities=22% Similarity=0.326 Sum_probs=78.6
Q ss_pred CceEEeC----CeEEEcCCCCCCCeEEEEEeccCCcc---eeEEEEEEEecCce--------------------EEeCCC
Q psy11131 10 PRTRVLG----PILAIEGVTAEDSGTYRCSSSNIGGE---ATAEVRLQVSTPYR--------------------VDVNPP 62 (150)
Q Consensus 10 ~~~~~~~----~~l~i~~~~~~d~G~Y~C~~~~~~~~---~~~~~~l~v~~~~~--------------------~~~~~~ 62 (150)
.|+.+.. .+|.|.+++.+|+|.|.|.+.+..+. ....+.|.|..++. ....+.
T Consensus 63 ~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (256)
T 3ux9_B 63 DRFSGSKSGTSASLAITGLQSEDEADYYCQVRDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLVESG 142 (256)
T ss_dssp TTEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEC----------------------CCEEEEEC
T ss_pred CcEEEEccCCEEEEEECCCChhhCEEEEEEEEECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEEcCC
Confidence 4665543 37999999999999999999875432 23446777775431 112223
Q ss_pred cEEEecCCcEEEEEEec-CCCCCCcEEEEeecC--cccC------CC---------------------cceeeEEEccCC
Q psy11131 63 LLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDG--RQIP------GR---------------------TSSTSLVINPVG 112 (150)
Q Consensus 63 ~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~--~~~~------~~---------------------~~~~~l~~~~~~ 112 (150)
...+.+|+.+.|.|.+. .+.. .+.+.|+++. ..+. .. .....|.|.++.
T Consensus 143 ~~~v~~G~~v~L~C~~~~~~~~-~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 221 (256)
T 3ux9_B 143 GGLVQPGGSLRLSCAASGFTFS-SYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLR 221 (256)
T ss_dssp CEEECTTCCEEEEEEEESSCGG-GSEEEEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCC
T ss_pred CeEEcCCCeEEEEEEEeCCccc-ccEEEEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCC
Confidence 34588999999999997 4311 5789998762 2110 00 003359999999
Q ss_pred CCCCceEEEEEEeC
Q psy11131 113 REDRGIYQCIARRS 126 (150)
Q Consensus 113 ~~~~g~y~C~~~~~ 126 (150)
.+|+|.|.|.+.+.
T Consensus 222 ~~DsG~Y~C~~~~~ 235 (256)
T 3ux9_B 222 AEDTAVYYCARYID 235 (256)
T ss_dssp GGGCEEEEEEEEET
T ss_pred hhhCEEEEEEEEcC
Confidence 99999999999985
No 194
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.61 E-value=3e-15 Score=93.70 Aligned_cols=118 Identities=18% Similarity=0.121 Sum_probs=71.2
Q ss_pred CCceEEeC----CeEEEcCCCCCCCeEEEEEeccCCcc----eeEEEEEEEe----cCceEEeCCCcEEEecCCcEEEEE
Q psy11131 9 GPRTRVLG----PILAIEGVTAEDSGTYRCSSSNIGGE----ATAEVRLQVS----TPYRVDVNPPLLSVHLDGSANFQC 76 (150)
Q Consensus 9 ~~~~~~~~----~~l~i~~~~~~d~G~Y~C~~~~~~~~----~~~~~~l~v~----~~~~~~~~~~~~~~~~g~~~~l~C 76 (150)
..|+.+.. .+|.|.+++.+|+|.|.|.+.+..+. ......|.|. .+|.+...+....+..|+.+.|.|
T Consensus 63 ~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C 142 (215)
T 3nl4_H 63 KGRFTISKTSTTVDLKITSPTTEDTATYFCVRKYGSEWGGDLWGPGTLVTVSSGQPKAPSVFPLAPCCGDTPSSTVTLGC 142 (215)
T ss_dssp TTTEEEEECSSEEEEEESSCCGGGCEEEEEEEECSSSSCEEEECCCEEEEECSSCCBCCEEEEECCCTTCCC--CEEEEE
T ss_pred cCCEEEEeeCCEEEEEECCCCcccCEEEEEEEecCCCccceEEcCCEEEEEeCCCcCCCEEEEecCCccccCCCcEEEEE
Confidence 35666543 35999999999999999999876442 2334567776 334443222222345789999999
Q ss_pred Eec-CCCCCCcEEEEeecCcccCCCcc------eeeEEE---ccCCCCCCceEEEEEEeCCC
Q psy11131 77 EIT-PYDSGPYLIAWFKDGRQIPGRTS------STSLVI---NPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 77 ~~~-~p~~~~~~~~w~~~~~~~~~~~~------~~~l~~---~~~~~~~~g~y~C~~~~~~g 128 (150)
.+. .+.. ...+.|++++..+..... ...+.+ ..+...| |.|+|.+.+..+
T Consensus 143 ~~~~~~p~-~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~l~v~~~d-g~ytC~v~~~~~ 202 (215)
T 3nl4_H 143 LVKGYLPE-PVTVTWNSGTLTNGVRTFPSVRQSSGLYSLSSVVSVTSSS-QPVTCNVAHPAT 202 (215)
T ss_dssp EEEEEBSS-CCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEECC----CCEEEEEEGGG
T ss_pred EEeeeeCC-CeEEEEeeCCEECCeEecCceECCCCCEEEEEEEEEeccC-CEEEEEEEeCCC
Confidence 998 4310 456889998764321100 112222 3345556 999999999877
No 195
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.61 E-value=1.1e-14 Score=80.52 Aligned_cols=85 Identities=21% Similarity=0.370 Sum_probs=69.9
Q ss_pred CceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCcc---------eeeEEEccCCCCCCceEEEEE
Q psy11131 54 PYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRTS---------STSLVINPVGREDRGIYQCIA 123 (150)
Q Consensus 54 ~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~~---------~~~l~~~~~~~~~~g~y~C~~ 123 (150)
+|.+...+....+.+|+.+.|.|.+. .| .+.+.|++++..+..... ...|.|.++...|.|.|.|.+
T Consensus 5 ~P~~~~~p~~~~~~~G~~~~l~C~~~g~p---~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a 81 (100)
T 2kdg_A 5 PPRFIQVPENMSIDEGRFCRMDFKVSGLP---APDVSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACVA 81 (100)
T ss_dssp EEECCCCCCCEEEETTCCEEEEEECEEES---CCEEEEEETTEEECCCSSSCEEEETTTEEEEEESSCCGGGCEEEEEEE
T ss_pred CCeEEeCCCCEEecCCCEEEEEEEEEeeC---CCEEEEEECCEECcCCCcEEEEEcCCCeEEEEECCCCcccCEEEEEEE
Confidence 44555566778889999999999999 88 899999999877654432 248999999999999999999
Q ss_pred EeCCCCceeeeEEEEEcCc
Q psy11131 124 RRSDGDVAQGSAELQLGGT 142 (150)
Q Consensus 124 ~~~~g~~~~~~~~l~v~~~ 142 (150)
.|..| .....+.|.|.+.
T Consensus 82 ~n~~g-~~~~~~~l~V~~~ 99 (100)
T 2kdg_A 82 KNRAG-EATFTVQLDVLAK 99 (100)
T ss_dssp EETTE-EEEEEEEEEEECC
T ss_pred EcCCC-eEEEEEEEEEEec
Confidence 99999 5778888888654
No 196
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.60 E-value=2.9e-14 Score=78.65 Aligned_cols=84 Identities=20% Similarity=0.202 Sum_probs=69.4
Q ss_pred CceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCcc---------eeeEEEccCCCCCCceEEEEE
Q psy11131 54 PYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRTS---------STSLVINPVGREDRGIYQCIA 123 (150)
Q Consensus 54 ~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~~---------~~~l~~~~~~~~~~g~y~C~~ 123 (150)
+|.+...+....+.+|+.+.|.|.+. .| .+.+.|++++..+..... ...|.|.++..+|.|.|.|.+
T Consensus 5 ~P~~~~~~~~~~v~~G~~v~l~C~~~g~p---~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a 81 (99)
T 1g1c_A 5 APKIFERIQSQTVGQGSDAHFRVRVVGKP---DPECEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVKA 81 (99)
T ss_dssp EEEEEECCCCEEEETTSCEEEEEEEEEES---CCEEEEEETTEECCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred CCceEecCcceEEcCCCcEEEEEEEEEeC---CCEEEEEECCEECCCCCCEEEEEcCCCEEEEEECCCCcCCCEEEEEEE
Confidence 34555667778899999999999999 88 899999999887764432 347999999999999999999
Q ss_pred EeCCCCceeeeEEEEEcC
Q psy11131 124 RRSDGDVAQGSAELQLGG 141 (150)
Q Consensus 124 ~~~~g~~~~~~~~l~v~~ 141 (150)
.|..| .....+.|.|.+
T Consensus 82 ~N~~g-~~~~~~~l~V~~ 98 (99)
T 1g1c_A 82 INIAG-ETSSHAFLLVQA 98 (99)
T ss_dssp EETTE-EEEEEEEEEEEC
T ss_pred EECCC-cEEEEEEEEEec
Confidence 99998 577777887754
No 197
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.60 E-value=2.5e-15 Score=96.16 Aligned_cols=116 Identities=24% Similarity=0.319 Sum_probs=81.4
Q ss_pred CceEEeC----CeEEEcCCCCCCCeEEEEEeccCCcce-eEEEEEEEec---CceEEeCCCcEEEecCCcEEEEEEec--
Q psy11131 10 PRTRVLG----PILAIEGVTAEDSGTYRCSSSNIGGEA-TAEVRLQVST---PYRVDVNPPLLSVHLDGSANFQCEIT-- 79 (150)
Q Consensus 10 ~~~~~~~----~~l~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~v~~---~~~~~~~~~~~~~~~g~~~~l~C~~~-- 79 (150)
.|+.+.. .+|.|.+++.+|+|.|.|.+.+..+.. .....|.|.. +|.+...+......+|+.+.|.|.+.
T Consensus 98 ~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~ 177 (252)
T 3bkj_L 98 DRFSGSGSGTDFTLRISRVEAEDLGVYYCFQASLVPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNF 177 (252)
T ss_dssp TTEEEEEETTEEEEEESSCCGGGCEEEEEEECSBSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHHTEEEEEEEEEEE
T ss_pred CceEEEccCCEEEEEECCCCcccCEEEEEEEEcCCccEECCCEEEEEeCCCcCcEEEEeCCChhhcCCCcEEEEEEEeeE
Confidence 5665543 389999999999999999998865432 2234677764 34444322222233688999999998
Q ss_pred CCCCCCc-EEEEeecCcccCCC-c--------c------eeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 80 PYDSGPY-LIAWFKDGRQIPGR-T--------S------STSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 80 ~p~~~~~-~~~w~~~~~~~~~~-~--------~------~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
.| .+ .+.|++++..+... . . ...|.|..+..+|.|.|.|.+.|...
T Consensus 178 ~p---~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~ 239 (252)
T 3bkj_L 178 YP---KDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTS 239 (252)
T ss_dssp BS---SCCEEEEEETTEEECSSEEEEECCCCTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTC
T ss_pred eC---CCcEEEEEECCeecCCCeeeecCcccCCCCCEEEEEEEEEcchhccCCCeEEEEEEeCCC
Confidence 44 43 89999998765433 0 0 24588888888899999999998765
No 198
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.60 E-value=2e-15 Score=99.89 Aligned_cols=119 Identities=14% Similarity=0.285 Sum_probs=76.6
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcc---eeEEEEE--EEecCceEEeCCCcEEEecCCcEEEEEEec-CCCCCCc-EEE
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGE---ATAEVRL--QVSTPYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPY-LIA 89 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~---~~~~~~l--~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~-~~~ 89 (150)
..|.|.....+|.|.|+|.+.|..+. ......+ .+..+|.+...+.. +.+|+.+.|.|.+. .+. ++ .+.
T Consensus 180 s~L~i~~~~~d~~g~Y~C~a~n~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~--~~~G~~v~l~C~~~g~~p--~~~~v~ 255 (327)
T 2wng_A 180 STAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTLEVTQQP--VRAENQVNVTCQVRKFYP--QRLQLT 255 (327)
T ss_dssp EEEEEECCTTGGGCEEEEEEECTTSCSCCEEEEEEGGGTBCBCCEEEEEEEC--CSSTTCCEEEEEEEEEBS--SCEEEE
T ss_pred EEEEEechhcCcCceEEEEEeccccCCCcccceEEeccccCCCCEEEEecCC--cCCCCcEEEEEEEccccC--CCcEEE
Confidence 45778777777789999999987654 2333333 23455555443322 56899999999998 440 33 899
Q ss_pred EeecCcccCCCc---------c----eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEE
Q psy11131 90 WFKDGRQIPGRT---------S----STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQL 139 (150)
Q Consensus 90 w~~~~~~~~~~~---------~----~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v 139 (150)
|++++..+.... . ...|.|..+..+|.|.|.|.|.|..+...++++.+.+
T Consensus 256 W~k~g~~l~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~~~~~s~~~~~~~ 318 (327)
T 2wng_A 256 WLENGNVSRTETASTVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAVSKSHDLKV 318 (327)
T ss_dssp EEETTEEEEEEECCSCEECTTSCEEEEEEEEC-------CCEEEEEEEETTCCCEEEEEECC-
T ss_pred EEECCeEccCcccCceEECCCCcEEEEEEEEEccccccCCCEEEEEEEeCCCCCchhheEEEe
Confidence 999987653210 0 2457788888899999999999999866666655544
No 199
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.60 E-value=4.3e-15 Score=93.67 Aligned_cols=115 Identities=16% Similarity=0.180 Sum_probs=80.4
Q ss_pred CCceEEeC------CeEEEcCCCCCCCeEEEEEeccCCc-----c---eeEEEEEEEec----CceEE-eCCCcEEEecC
Q psy11131 9 GPRTRVLG------PILAIEGVTAEDSGTYRCSSSNIGG-----E---ATAEVRLQVST----PYRVD-VNPPLLSVHLD 69 (150)
Q Consensus 9 ~~~~~~~~------~~l~i~~~~~~d~G~Y~C~~~~~~~-----~---~~~~~~l~v~~----~~~~~-~~~~~~~~~~g 69 (150)
+.|+.+.. .+|.|.+++.+|+|.|.|.+.+..+ . ....+.|.|.. +|.+. ..+.. .+.+|
T Consensus 65 ~~R~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~-~~~~g 143 (225)
T 1op3_H 65 KGRFTVSRDDLEDFVYLQMHKMRVEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPSS-KSTSG 143 (225)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCSCBCCEEEEECCCT-TCCCC
T ss_pred CCceEEEecCCCCEEEEEECCCChhhCEEEEEEEecCCCccccccceeecCCEEEecccCCCcCCeEEEecccc-cccCC
Confidence 36776652 5899999999999999999988653 1 12345788875 23332 22222 24579
Q ss_pred CcEEEEEEec-C-CCCCCc-EEEEeecCcccCC---------Ccc---eeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 70 GSANFQCEIT-P-YDSGPY-LIAWFKDGRQIPG---------RTS---STSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 70 ~~~~l~C~~~-~-p~~~~~-~~~w~~~~~~~~~---------~~~---~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
+.+.|.|.+. . | .+ .+.|++++..+.. ... .+.|.|......| |.|+|.|.|..+
T Consensus 144 ~~v~L~C~~~g~~P---~p~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~ 213 (225)
T 1op3_H 144 GTAALGCLVKDYFP---EPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPS 213 (225)
T ss_dssp CEEEEEEEEEEEBS---SCCEEECCTTSCCTTCEECCCEECTTSCEEEEEEEEEEGGGTTC-CCCCEEEEEGGG
T ss_pred CcEEEEEEEEeEEC---CCeEEEEecCCCcCCeEecCceeCCCCCEEEEEEEEEechhcCC-CcEEEEEEcCCC
Confidence 9999999998 4 7 66 9999998764321 011 3457888887778 999999999655
No 200
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.60 E-value=4.3e-14 Score=91.20 Aligned_cols=117 Identities=21% Similarity=0.278 Sum_probs=81.5
Q ss_pred CCceEEeC----CeEEEcCCCCCCCeEEEEEeccCCcc-eeEEEEEEEecCc------------------eE-EeCCCcE
Q psy11131 9 GPRTRVLG----PILAIEGVTAEDSGTYRCSSSNIGGE-ATAEVRLQVSTPY------------------RV-DVNPPLL 64 (150)
Q Consensus 9 ~~~~~~~~----~~l~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~~l~v~~~~------------------~~-~~~~~~~ 64 (150)
+.|+.+.. .+|.|.+++.+|+|.|.|.+.+..+. ....+.|.|..++ .+ ...+...
T Consensus 69 ~~R~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (264)
T 2gjj_A 69 PDRFTGSGSGTDFTLTIGSVKAEDLAVYYCQQYSNYPWTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPE 148 (264)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEECC-------------------CCEEEECCCE
T ss_pred CccEEEecCCCEEEEEECCCCHHHCEEEEEEEecCCccEecCCEEEEEEcCCcccccccccccccccccCcEEEeCCCCE
Confidence 45666543 48999999999999999999886442 2234577887642 11 1222334
Q ss_pred EEecCCcEEEEEEec-CCCCCCcEEEEeecC--cccC-------C----------Ccc----------eeeEEEccCCCC
Q psy11131 65 SVHLDGSANFQCEIT-PYDSGPYLIAWFKDG--RQIP-------G----------RTS----------STSLVINPVGRE 114 (150)
Q Consensus 65 ~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~--~~~~-------~----------~~~----------~~~l~~~~~~~~ 114 (150)
.+.+|+.+.|.|.+. .+.. .+.+.|+++. .... . ..+ ...|.|.++..+
T Consensus 149 ~v~~G~~v~L~C~~~~~~~~-~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~ 227 (264)
T 2gjj_A 149 VVKTGASVKISCKASGYSFT-GYFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNSLTSE 227 (264)
T ss_dssp EECTTCCEEEEEEEESSCGG-GSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred EEcCCCcEEEEEEEeCCccC-CeEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECcCCcc
Confidence 688999999999998 6500 2799999863 2110 0 000 357999999999
Q ss_pred CCceEEEEEEeC
Q psy11131 115 DRGIYQCIARRS 126 (150)
Q Consensus 115 ~~g~y~C~~~~~ 126 (150)
|+|.|.|.+.|.
T Consensus 228 DsG~Y~C~a~n~ 239 (264)
T 2gjj_A 228 DSADYYCVRSGN 239 (264)
T ss_dssp GCEEEEEEEECS
T ss_pred cCEEEEEEEecC
Confidence 999999999985
No 201
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.59 E-value=1.2e-14 Score=86.65 Aligned_cols=94 Identities=23% Similarity=0.269 Sum_probs=75.8
Q ss_pred EEEEecCceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCcc---------eeeEEEccCCCCCCc
Q psy11131 48 RLQVSTPYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRTS---------STSLVINPVGREDRG 117 (150)
Q Consensus 48 ~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~~---------~~~l~~~~~~~~~~g 117 (150)
.+.+..+|.+...+....+.+|+.+.|.|.+. .| .+.+.|++++..+..... ...|.|.++...|.|
T Consensus 35 ~~~v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~P---~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G 111 (154)
T 1fhg_A 35 EEKPHVKPYFTKTILDMEVVEGSAARFDCKVEGYP---DPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDA 111 (154)
T ss_dssp CCCCCEEEEEEECCCCEEEETTSCEEEEEEEEEES---CCEEEEEETTEECCCSSSEEEEECTTCEEEEEESSCCGGGCE
T ss_pred cccCCCCCeEEccCCcEEEeCCCeEEEEEEEEEec---CCEEEEEECCEECCCCCcEEEEECCCCeEEEEECCCChhcCE
Confidence 34445566777777778899999999999999 88 899999999887754432 248999999999999
Q ss_pred eEEEEEEeCCCCceeeeEEEEEcCcCcc
Q psy11131 118 IYQCIARRSDGDVAQGSAELQLGGTRNI 145 (150)
Q Consensus 118 ~y~C~~~~~~g~~~~~~~~l~v~~~p~~ 145 (150)
.|.|.+.|..| .....+.|.|..+|.+
T Consensus 112 ~Y~C~a~N~~G-~~~~~~~l~V~~~p~~ 138 (154)
T 1fhg_A 112 KYTCKAVNSLG-EATCTAELLVETMGKE 138 (154)
T ss_dssp EEEEEEEETTE-EEEEEEEEEEECC---
T ss_pred EEEEEEEECCC-eEEEEEEEEEeCcCcC
Confidence 99999999999 5778888998877654
No 202
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.59 E-value=2.2e-14 Score=78.34 Aligned_cols=82 Identities=12% Similarity=0.168 Sum_probs=66.6
Q ss_pred ceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecC--cccCCCcc------eeeEEEccCCCCCCceEEEEEEe
Q psy11131 55 YRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDG--RQIPGRTS------STSLVINPVGREDRGIYQCIARR 125 (150)
Q Consensus 55 ~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~--~~~~~~~~------~~~l~~~~~~~~~~g~y~C~~~~ 125 (150)
|.+...+....+.+|+.+.|.|.+. .| .|.+.|++++ ..+..... ...|.|.++..+|.|.|.|.+.|
T Consensus 3 P~i~~~~~~~~v~~G~~~~l~C~~~g~P---~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N 79 (93)
T 1wit_A 3 PKILTASRKIKIKAGFTHNLEVDFIGAP---DPTATWTVGDSGAALAPELLVDAKSSTTSIFFPSAKRADSGNYKLKVKN 79 (93)
T ss_dssp CEECCCCCEEEECTTBCCEEEEEEECCS---SCEEEEECSTTTCBCSTTSEEEEETTEEEEECTTBCGGGCEEEEEEEEE
T ss_pred CeEEcCCCceEEeCCCEEEEEEEEEEcC---CCEEEEEECCCCcccCCcEEEEecCCEEEEEECCCChhcCEEEEEEEEc
Confidence 4444455667889999999999999 99 9999999998 66543321 46799999999999999999999
Q ss_pred CCCCceeeeEEEEEc
Q psy11131 126 SDGDVAQGSAELQLG 140 (150)
Q Consensus 126 ~~g~~~~~~~~l~v~ 140 (150)
..| ..+..+.|.|+
T Consensus 80 ~~G-~~~~~~~l~V~ 93 (93)
T 1wit_A 80 ELG-EDEAIFEVIVQ 93 (93)
T ss_dssp TTE-EEEEEEEEEEC
T ss_pred CCC-eEEEEEEEEEC
Confidence 999 67777777763
No 203
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.59 E-value=4.4e-14 Score=77.90 Aligned_cols=84 Identities=21% Similarity=0.308 Sum_probs=69.0
Q ss_pred CceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCcc---------eeeEEEccCCCCCCceEEEEE
Q psy11131 54 PYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRTS---------STSLVINPVGREDRGIYQCIA 123 (150)
Q Consensus 54 ~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~~---------~~~l~~~~~~~~~~g~y~C~~ 123 (150)
+|.+...+....+.+|+.+.|.|.+. .| .+.+.|++++..+..... ...|.|.++..+|.|.|.|.+
T Consensus 5 ~P~~~~~~~~~~v~~G~~v~l~C~~~g~p---~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a 81 (99)
T 1u2h_A 5 PPTFKVSLMDQSVREGQDVIMSIRVQGEP---KPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKA 81 (99)
T ss_dssp EEEEEECCCCEEEETTCCEEEEEEEEEES---CCEEEEEETTEECCCBTTEEEEECGGGEEEEEESSCCGGGCEEEEEEE
T ss_pred CCEEEEcCCceEecCCCEEEEEEEEEEcC---CCEEEEEECCEECCCCCCEEEEECCCCEEEEEEccCCcCCCEEEEEEE
Confidence 45555667777889999999999999 88 899999999887654432 236999999999999999999
Q ss_pred EeCCCCceeeeEEEEEcC
Q psy11131 124 RRSDGDVAQGSAELQLGG 141 (150)
Q Consensus 124 ~~~~g~~~~~~~~l~v~~ 141 (150)
.|..| .....+.|.|.+
T Consensus 82 ~N~~g-~~~~~~~l~V~~ 98 (99)
T 1u2h_A 82 VNEYG-ARQCEARLEVRG 98 (99)
T ss_dssp EETTE-EEEEEEEEEEEC
T ss_pred EECCC-ceeEEEEEEEEC
Confidence 99998 577777887754
No 204
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.59 E-value=1.6e-15 Score=103.81 Aligned_cols=116 Identities=16% Similarity=0.172 Sum_probs=82.0
Q ss_pred CCceEEeC------CeEEEcCCCCCCCeEEEEEeccCCc-----ceeEEEEEEEec----CceEEeCCCcEEEecCCcEE
Q psy11131 9 GPRTRVLG------PILAIEGVTAEDSGTYRCSSSNIGG-----EATAEVRLQVST----PYRVDVNPPLLSVHLDGSAN 73 (150)
Q Consensus 9 ~~~~~~~~------~~l~i~~~~~~d~G~Y~C~~~~~~~-----~~~~~~~l~v~~----~~~~~~~~~~~~~~~g~~~~ 73 (150)
..|+.+.. .+|.|.+++.+|+|.|+|.+.|..+ .......|.|.. +|.+...+....+.+|+.+.
T Consensus 283 ~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~ 362 (438)
T 1qgc_4 283 KGRFTISRDNAKNTLYLQMSSLRSADTAMYYCVRREDGGDEGFAYWGQGTVVTVSAAKTTPPSVYPLAPGSAAAAASMVT 362 (438)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCCEEEEEECCSSSCCCCCSBCCCEEEEECSSCCBCCEEEEECCCGGGCCSSEEE
T ss_pred CCcEEEEeecCCCeEEEEECCCChhhCEEEEEEEEccCCCccceeeCCCEEEEEecCCCCCCeEEEcCcccccccCCcEE
Confidence 35665542 3899999999999999999998433 222345677763 33333222222345799999
Q ss_pred EEEEec-C-CCCCCc-EEEEeecCcccCCCc--------c---eeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 74 FQCEIT-P-YDSGPY-LIAWFKDGRQIPGRT--------S---STSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 74 l~C~~~-~-p~~~~~-~~~w~~~~~~~~~~~--------~---~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
|.|.+. . | .+ .+.|++++..+.... . .+.|.|.....+| |.|+|.|.|..|
T Consensus 363 L~C~~~g~~P---~~~~v~W~~~g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~g 427 (438)
T 1qgc_4 363 LGCLVKGYFP---EPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPAS 427 (438)
T ss_dssp EEEEEESCBS---SCCEEEEGGGTCCSSEEECCCEEETTEEEEEEEEEEEEEHHHH-SCCEEEEEEGGG
T ss_pred EEEEeccccC---CCcEEEEecCCCCCceeecCccccCCcEEEEEEEEEehhhcCC-ceEEEEEEeCCC
Confidence 999998 5 7 66 999999887654210 0 2357888877778 999999999887
No 205
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.59 E-value=2.9e-15 Score=99.94 Aligned_cols=116 Identities=14% Similarity=0.165 Sum_probs=82.6
Q ss_pred CCceEEeC------CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEec----CceEEeCCCcEEEecCCcEEEEEEe
Q psy11131 9 GPRTRVLG------PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVST----PYRVDVNPPLLSVHLDGSANFQCEI 78 (150)
Q Consensus 9 ~~~~~~~~------~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~----~~~~~~~~~~~~~~~g~~~~l~C~~ 78 (150)
+.|+.+.. .+|.|.+++.+|+|.|+|.+.+..+.....+.|.|.. +|.+...+....+.+|+.+.|.|.+
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~ 144 (344)
T 1za6_B 65 KGKATLTADTSASTAYVELSSLRSEDTAVYFCTRSLNMAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLV 144 (344)
T ss_dssp BTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEETTTTCEECCCEEEEECSSCCBCCEEEEECCSCTTTSSSEEEEEEEE
T ss_pred CCcEEEEEecCCCEEEEEECCCCcccCEEEEEEEecCcceecCcEEEEEecCCCCCCeEEEccccccccCCCcEEEEEEE
Confidence 45776642 4799999999999999999998654444556788873 2333322222234689999999999
Q ss_pred c-C-CCCCC-cEEEEeecCcccC---------CCcc---eeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 79 T-P-YDSGP-YLIAWFKDGRQIP---------GRTS---STSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 79 ~-~-p~~~~-~~~~w~~~~~~~~---------~~~~---~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
. . | . +.+.|++++..+. .... ...|.|..+..+| |.|.|.+.|..+
T Consensus 145 ~g~~P---~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~ 205 (344)
T 1za6_B 145 KDYFP---EPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPS 205 (344)
T ss_dssp EEEBS---SCCCEEETTTTBCTTEEECCCEECTTSCEEEEEEEEEETTHHHH-BCEEEEEEEGGG
T ss_pred eeEEC---CCeEEEEecCCccCceeECCCeECCCCCEEEEEEEEEcHHHcCC-CcEEEEEEeCCC
Confidence 8 4 5 4 7999999886531 1111 3467888777777 999999999876
No 206
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.59 E-value=1.4e-14 Score=80.00 Aligned_cols=85 Identities=22% Similarity=0.263 Sum_probs=69.5
Q ss_pred EecCceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCcc-----eeeEEEccCCCCCCceEEEEEE
Q psy11131 51 VSTPYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRTS-----STSLVINPVGREDRGIYQCIAR 124 (150)
Q Consensus 51 v~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~~-----~~~l~~~~~~~~~~g~y~C~~~ 124 (150)
+..+|.+...+....+.+|+.+.|.|.+. .| .+.+.|++++..+..... ...|.|.++..+|.|.|.|.+.
T Consensus 8 ~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p---~p~v~W~~~g~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 84 (99)
T 2yr3_A 8 MEVAPSFSSVLKDCAVIEGQDFVLQCSVRGTP---VPRITWLLNGQPIQYARSTCEAGVAELHIQDALPEDHGTYTCLAE 84 (99)
T ss_dssp CCEEEEEEECCCCEEECTTCCEEEECEEEEES---CCCCEEEESSSBCSSCCCEEETTEEEEEECSCCTTCCBCEEEEEE
T ss_pred cccCCceeecCCCCEEeCCCeEEEEEEEeeeC---CCeEEEEECCEECcccceEeeCCeEEEEECCCChhhCEEEEEEEE
Confidence 34456666667778899999999999999 88 889999999887654432 4689999999999999999999
Q ss_pred eCCCCceeeeEEEEE
Q psy11131 125 RSDGDVAQGSAELQL 139 (150)
Q Consensus 125 ~~~g~~~~~~~~l~v 139 (150)
|..| .....+.|.|
T Consensus 85 N~~g-~~~~~~~l~V 98 (99)
T 2yr3_A 85 NALG-QVSCSAWVTV 98 (99)
T ss_dssp CSSC-EEEEECCEEE
T ss_pred ECCC-eEEEEEEEEE
Confidence 9999 5666666665
No 207
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.58 E-value=9.5e-15 Score=100.77 Aligned_cols=116 Identities=13% Similarity=0.154 Sum_probs=82.7
Q ss_pred CCceEEeC------CeEEEcCCCCCCCeEEEEEeccCCc------------ceeEEEEEEEec----CceEEeCCCcEEE
Q psy11131 9 GPRTRVLG------PILAIEGVTAEDSGTYRCSSSNIGG------------EATAEVRLQVST----PYRVDVNPPLLSV 66 (150)
Q Consensus 9 ~~~~~~~~------~~l~i~~~~~~d~G~Y~C~~~~~~~------------~~~~~~~l~v~~----~~~~~~~~~~~~~ 66 (150)
+.|+.+.. .+|.|.+++.+|+|.|+|.+.+..+ .....+.|.|.. +|.+...+....+
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~ 144 (457)
T 1hzh_H 65 QDRVTFTADTSANTAYMELRSLRSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSASTKGPSVFPLAPSSKS 144 (457)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCCCBCCEEEEECCCSCC
T ss_pred cCceEEEEeCCCCEEEEEECCCCcccCEEEEEEEecCCccccccccccccceECCcEEEEecCCCCCCCeEEecCccccc
Confidence 45776642 4799999999999999999998754 122445777764 3443332222235
Q ss_pred ecCCcEEEEEEec-C-CCCCC-cEEEEeecCcccCC---------Ccc---eeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 67 HLDGSANFQCEIT-P-YDSGP-YLIAWFKDGRQIPG---------RTS---STSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 67 ~~g~~~~l~C~~~-~-p~~~~-~~~~w~~~~~~~~~---------~~~---~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
.+|+.+.|.|.+. . | . +.+.|++++..+.. ... ...|.|..+..+| |.|.|.+.|..+
T Consensus 145 ~~g~~v~L~C~~~g~~P---~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~ 217 (457)
T 1hzh_H 145 TSGGTAALGCLVKDYFP---EPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPS 217 (457)
T ss_dssp CTTCCEEEEEEEESBBS---CCCEEEETTTTBCTTEEEEEEEECTTSCEEEEEEEEECSGGGGT-SCCEEEEEEGGG
T ss_pred cCCCcEEEEEEEeEEeC---CCeEEEEEeCCEeccceEcCceECCCCCEEEEEEEEecccccCC-ceEEEEEEeCCC
Confidence 7899999999998 4 5 4 79999998854321 111 2468888888888 999999999766
No 208
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.58 E-value=3.2e-14 Score=80.88 Aligned_cols=89 Identities=21% Similarity=0.316 Sum_probs=73.9
Q ss_pred cCceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCc-c---------eeeEEEccCCCCCCceEEE
Q psy11131 53 TPYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRT-S---------STSLVINPVGREDRGIYQC 121 (150)
Q Consensus 53 ~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~-~---------~~~l~~~~~~~~~~g~y~C 121 (150)
.+|.+...+....+.+|+.+.|.|.+. .| .+.+.|++++..+.... . ...|.|.++..+|.|.|.|
T Consensus 14 ~~p~f~~~p~~~~v~~G~~v~L~C~~~g~p---~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 90 (116)
T 2kkq_A 14 RAPMFIYKPQSKKVLEGDSVKLECQISAIP---PPKLFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNKKDAGWYTV 90 (116)
T ss_dssp BCCCBSSCCCCEEEETTEEEEEEEEBCCBS---CCEEEEEETTEECCCCBTTEEEEECTTCEEEEEEEEECGGGCEEEEE
T ss_pred CCCeEEeCCCcEEEeCCCcEEEEEEEeccC---CCEEEEEECCEECcCCCCeEEEEeCCCCeEEEEECCCCcccCEEEEE
Confidence 455666677788899999999999999 88 89999999988765422 1 1279999999999999999
Q ss_pred EEEeCCCCceeeeEEEEEcCcCcc
Q psy11131 122 IARRSDGDVAQGSAELQLGGTRNI 145 (150)
Q Consensus 122 ~~~~~~g~~~~~~~~l~v~~~p~~ 145 (150)
.+.|..| .....+.|.|..+|+.
T Consensus 91 ~a~N~~G-~~~~~~~l~V~~~p~~ 113 (116)
T 2kkq_A 91 SAVNEAG-VTTCNTRLDVTARPNQ 113 (116)
T ss_dssp EEEETTE-EEEEEEEEEEECCSCC
T ss_pred EEEcCCC-eEEEEEEEEEeCCCCC
Confidence 9999999 5788889999887754
No 209
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.58 E-value=1.9e-14 Score=92.77 Aligned_cols=116 Identities=15% Similarity=0.137 Sum_probs=79.1
Q ss_pred CCceEEeC------CeEEEcCCCCCCCeEEEEEeccCCc-c--eeEEEEEEEec----CceEEeCCCcEEEecCCcEEEE
Q psy11131 9 GPRTRVLG------PILAIEGVTAEDSGTYRCSSSNIGG-E--ATAEVRLQVST----PYRVDVNPPLLSVHLDGSANFQ 75 (150)
Q Consensus 9 ~~~~~~~~------~~l~i~~~~~~d~G~Y~C~~~~~~~-~--~~~~~~l~v~~----~~~~~~~~~~~~~~~g~~~~l~ 75 (150)
..|+.+.. .+|.|.+++.+|+|.|.|.+.+..+ . ....+.|.|.. +|.+...+....+..|+.+.|.
T Consensus 71 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~v~~g~~v~L~ 150 (261)
T 2xqy_G 71 KDKVTLTVDKSSSTVYIQLSSLTSEDSAVYYCGRLGYVYGFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLG 150 (261)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCCC--CCSEEEEE
T ss_pred CCcEEEEecCCCCEEEEEEcCCCcccCeEEEEEEecCCCcceEECCCEEEEEccCCCCCCeEEEeCCCccccCCCcEEEE
Confidence 35776642 4899999999999999999988532 1 12345788874 2333322222235679999999
Q ss_pred EEec--CCCCCCc-EEEEeecCcccCCC--------cc---eeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 76 CEIT--PYDSGPY-LIAWFKDGRQIPGR--------TS---STSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 76 C~~~--~p~~~~~-~~~w~~~~~~~~~~--------~~---~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
|.+. .| .+ .+.|++++..+... .. .+.|.|.....+| |.|.|.+.|...
T Consensus 151 C~~~g~~P---~~i~v~W~k~g~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~YtC~v~n~~~ 213 (261)
T 2xqy_G 151 CLVKGYFP---EPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPAS 213 (261)
T ss_dssp EEEEEEBS---SCCEEEEGGGTCCTTEEECCCEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGG
T ss_pred EEEEeEeC---CCCEEEEecCCCcCceEecCceecCCcEEEEEEEEEeccccCC-CEEEEEEEECCC
Confidence 9998 47 65 99999987654211 01 3567887777777 999999998654
No 210
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.58 E-value=1.4e-14 Score=81.46 Aligned_cols=89 Identities=26% Similarity=0.392 Sum_probs=73.9
Q ss_pred CceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCcc---------eeeEEEccCCCCCCceEEEEE
Q psy11131 54 PYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRTS---------STSLVINPVGREDRGIYQCIA 123 (150)
Q Consensus 54 ~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~~---------~~~l~~~~~~~~~~g~y~C~~ 123 (150)
+|.+...+....+.+|+.+.|.|.+. .| .+.+.|++++..+..... ...|.|.++..+|.|.|.|.+
T Consensus 9 ~P~i~~~~~~~~v~~G~~v~l~C~~~g~p---~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a 85 (110)
T 2dm3_A 9 RPHFLQAPGDLTVQEGKLCRMDCKVSGLP---TPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIA 85 (110)
T ss_dssp CCEEEECCCEEEEESSSCBCCEEEEECSS---CCEEECBBSSSBCCCCSSEEEEECTTSCEEEEESSCCGGGCSBBCEEE
T ss_pred CCcEEeCCCcEEEeCCCEEEEEEEEEEcC---CCEEEEEECCEECCCCCceEEEEecCCeEEEEEeeCCcccCEEEEEEE
Confidence 45566667778899999999999999 88 899999999877654432 247999999999999999999
Q ss_pred EeCCCCceeeeEEEEEcCcCccc
Q psy11131 124 RRSDGDVAQGSAELQLGGTRNIK 146 (150)
Q Consensus 124 ~~~~g~~~~~~~~l~v~~~p~~~ 146 (150)
.|..| .....+.|.|.++|...
T Consensus 86 ~n~~g-~~~~~~~l~V~~~p~~P 107 (110)
T 2dm3_A 86 TNRAG-QNSFSLELVVAAKESGP 107 (110)
T ss_dssp ECSSC-EEEECCEEEEECCCCSS
T ss_pred ECCCC-EEEEEEEEEEeCCCCCC
Confidence 99999 57888899998876543
No 211
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.58 E-value=5.1e-14 Score=80.21 Aligned_cols=79 Identities=11% Similarity=0.173 Sum_probs=67.4
Q ss_pred CCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCcc-------eeeEEEccCCCCCCceEEEEEEeCCCCcee
Q psy11131 61 PPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRTS-------STSLVINPVGREDRGIYQCIARRSDGDVAQ 132 (150)
Q Consensus 61 ~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~~-------~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~ 132 (150)
+....+.+|+.+.|.|.+. .| .|.+.|++++..+..... ...|.|.++..+|.|.|.|.+.|..| ..+
T Consensus 31 ~~~~~v~~G~~~~l~C~~~g~P---~p~i~W~k~g~~l~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G-~~~ 106 (118)
T 2e7c_A 31 RQTYIRKVGEQLNLVVPFQGKP---RPQVVWTKGGAPLDTSRVHVRTSDFDTVFFVRQAARSDSGEYELSVQIENM-KDT 106 (118)
T ss_dssp SSCEEEESSSCEEEEEEEEEES---CCEEEEEETTEECCCSSCEEEECSSEEEEEESSCCTTTCEEEEEEEECSSC-EEC
T ss_pred CCCEEEECCCEEEEEEEEccCC---CCEEEEEECCEECCCCcEEEEECCCeEEEEECCCChhcCEEEEEEEEeCCC-eEE
Confidence 3567888999999999999 89 899999999887753221 35699999999999999999999999 688
Q ss_pred eeEEEEEcCcC
Q psy11131 133 GSAELQLGGTR 143 (150)
Q Consensus 133 ~~~~l~v~~~p 143 (150)
..+.|.|.+.|
T Consensus 107 ~~~~l~V~~~P 117 (118)
T 2e7c_A 107 ATIRIRVVEKA 117 (118)
T ss_dssp CEEEEEEECCC
T ss_pred EEEEEEEEcCC
Confidence 88999998776
No 212
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.58 E-value=7e-15 Score=94.61 Aligned_cols=116 Identities=16% Similarity=0.165 Sum_probs=66.9
Q ss_pred CCceEEeC------CeEEEcCCCCCCCeEEEEEeccCCc----------c---eeEEEEEEEec----CceEEeCCCcEE
Q psy11131 9 GPRTRVLG------PILAIEGVTAEDSGTYRCSSSNIGG----------E---ATAEVRLQVST----PYRVDVNPPLLS 65 (150)
Q Consensus 9 ~~~~~~~~------~~l~i~~~~~~d~G~Y~C~~~~~~~----------~---~~~~~~l~v~~----~~~~~~~~~~~~ 65 (150)
..|+.+.. .+|.|.+++.+|+|.|.|.+.+..+ . ....+.|.|.. +|.+........
T Consensus 65 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~~~~~P~v~~~~p~~~ 144 (257)
T 3bn9_D 65 KGRFTISRDNSKNTLYLQMSSLRAEDTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSASTKGPSVFPLAPSSK 144 (257)
T ss_dssp TTTEEEEEETTTTEEEEEEESCCGGGCEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECSSCCBCCEECCCCC---
T ss_pred CCceEEEecCCCCEEEEEECCCChhhCEEEEEEEecCCCcccccccccceeeeeCCcEEEEecCCCCcCCcEEEecCccc
Confidence 36776652 4799999999999999999987643 1 11235788874 344433222233
Q ss_pred EecCCcEEEEEEec--CCCCCCc-EEEEeecCcccCCC---------cc---eeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 66 VHLDGSANFQCEIT--PYDSGPY-LIAWFKDGRQIPGR---------TS---STSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 66 ~~~g~~~~l~C~~~--~p~~~~~-~~~w~~~~~~~~~~---------~~---~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
+..|+.+.|.|.+. .| .+ .+.|++++..+... .. .+.|.|......+ |.|+|.+.|...
T Consensus 145 ~~~g~~v~L~C~~~g~~P---~pi~v~W~k~g~~~~~~~~~~~~~~~g~y~~~s~L~I~~~~~~~-g~YtC~v~n~~~ 218 (257)
T 3bn9_D 145 STSGGTAALGCLVKDYFP---EPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPS 218 (257)
T ss_dssp --------CCCEEEEEBS---SCCEEEETTTTCCSSCEECCCEECTTSCEEEEEECCCC--------CEEEEEEEGGG
T ss_pred ccCCCcEEEEEEEeeEEC---CCcEEEEeeCCCcCCcEecCCeEcCCCCEEEEEEEEEcccccCC-CeEEEEEEecCC
Confidence 56788999999998 47 66 99999987653211 01 2345666666567 999999999654
No 213
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.57 E-value=9.8e-15 Score=94.18 Aligned_cols=117 Identities=21% Similarity=0.340 Sum_probs=79.9
Q ss_pred CceEEeC-----CeEEEcCCCCCCCeEEEEEeccC--CcceeEEEEEEEec------CceEE-eCCCcEEEecCCcEEEE
Q psy11131 10 PRTRVLG-----PILAIEGVTAEDSGTYRCSSSNI--GGEATAEVRLQVST------PYRVD-VNPPLLSVHLDGSANFQ 75 (150)
Q Consensus 10 ~~~~~~~-----~~l~i~~~~~~d~G~Y~C~~~~~--~~~~~~~~~l~v~~------~~~~~-~~~~~~~~~~g~~~~l~ 75 (150)
.|+.+.. .+|.|.+++.+|+|.|+|.+.+. .........|.|.. +|.+. ..+....+.+|+.+.|.
T Consensus 88 ~R~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~ 167 (268)
T 3pl6_D 88 DRFFAVRPEGSVSTLKIQRTERGDSAVYLCATSALGDTQYFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLV 167 (268)
T ss_dssp TTEEEECTTSSSEEEEECSCCGGGCEEEEEEEESSSSSCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEE
T ss_pred CcEEEEecCCCEEEEEECCCCcccCEEEEEEEecCCCceeeCCcEEEEEecCcccccCCceEEeCCCcccccCCCceEEE
Confidence 6776653 57999999999999999999873 22334455677775 33332 23333334458999999
Q ss_pred EEec-CCCCCCc-EEEEeecCcccCCC---------------cc----eeeEEEccCCCCC-CceEEEEEEeCCC
Q psy11131 76 CEIT-PYDSGPY-LIAWFKDGRQIPGR---------------TS----STSLVINPVGRED-RGIYQCIARRSDG 128 (150)
Q Consensus 76 C~~~-~p~~~~~-~~~w~~~~~~~~~~---------------~~----~~~l~~~~~~~~~-~g~y~C~~~~~~g 128 (150)
|.+. .+. .+ .+.|++++..+... .. ...|.+.....+| .|.|+|.+.+...
T Consensus 168 C~~~g~~p--~~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~l 240 (268)
T 3pl6_D 168 CLATGFYP--DHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGL 240 (268)
T ss_dssp EEEEEEBS--SCEEEEEEESSSEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCB
T ss_pred EEECcccC--CCeEEEEEECCEECCCCeEeccccccccccCCCCcEEEEEEEEEcHHHhccCCCEEEEEEEcCCC
Confidence 9998 440 34 89999988766431 11 2456666666666 8999999998754
No 214
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.57 E-value=5.4e-14 Score=79.11 Aligned_cols=89 Identities=20% Similarity=0.317 Sum_probs=72.4
Q ss_pred CceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCc-c---------eeeEEEccCCCCCCceEEEE
Q psy11131 54 PYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRT-S---------STSLVINPVGREDRGIYQCI 122 (150)
Q Consensus 54 ~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~-~---------~~~l~~~~~~~~~~g~y~C~ 122 (150)
+|.+...+....+.+|+.+.|.|.+. .| .+.+.|++++..+.... . ...|.|.++..+|.|.|.|.
T Consensus 8 ~P~~~~~~~~~~v~~G~~v~l~C~~~g~p---~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~ 84 (110)
T 2dm2_A 8 APFFEMKLKHYKIFEGMPVTFTCRVAGNP---KPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIM 84 (110)
T ss_dssp CCCBSSCCCCEEEETTCCEEEEEEBCCSS---CCEEEEECSSCBCCTTCSSEEEEECTTCEEEEEESSCCTTTCSCCEEE
T ss_pred CCEEEecCcCeEEeCCCeEEEEEEEEecC---CCEEEEEECCEECCCCCCeEEEEECCCcEEEEEECCCChhhCEEEEEE
Confidence 45555566778899999999999999 88 89999999988775422 1 23699999999999999999
Q ss_pred EEeCCCCceeeeEEEEEcCcCccc
Q psy11131 123 ARRSDGDVAQGSAELQLGGTRNIK 146 (150)
Q Consensus 123 ~~~~~g~~~~~~~~l~v~~~p~~~ 146 (150)
+.|..| .....+.|.|..+|...
T Consensus 85 a~N~~g-~~~~~~~l~V~~~~~~P 107 (110)
T 2dm2_A 85 AANPQG-RISCTGRLMVQAVNSGP 107 (110)
T ss_dssp EECTTC-CEEECCCEEEECCSCCS
T ss_pred EEECCC-eEEEEEEEEEECCCCCC
Confidence 999999 57788888888776543
No 215
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.57 E-value=1e-15 Score=96.76 Aligned_cols=109 Identities=21% Similarity=0.304 Sum_probs=65.3
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcce-eEEEEEEEec---CceEEeCCCcEEEecCCcEEEEEEec-C-CCCCCc-EEE
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEA-TAEVRLQVST---PYRVDVNPPLLSVHLDGSANFQCEIT-P-YDSGPY-LIA 89 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~v~~---~~~~~~~~~~~~~~~g~~~~l~C~~~-~-p~~~~~-~~~ 89 (150)
.+|.|.+++.+|+|.|.|.+.+..+.. .....|.|.. +|.+...+......+|+.+.|.|.+. . | .+ .+.
T Consensus 93 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p---~~~~v~ 169 (233)
T 3bqu_C 93 FVFTIENMLSEDVADYYCLQSDNLPYTFGGGTNLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYP---KDINVK 169 (233)
T ss_dssp EEEC-----CCCCSEEEEEECSSSSCCBCCCCBC---CCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBS---SCEEEE
T ss_pred EEEEECCCCHHHCEEEEEEEecCCceeecCCEEEEEeCCCCCCEEEEeCCCHHhhcCCceEEEEEEccccC---CceEEE
Confidence 379999999999999999998865432 2223466654 34444322222223688999999998 3 4 43 799
Q ss_pred EeecCcccCCC-c--------c------eeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 90 WFKDGRQIPGR-T--------S------STSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 90 w~~~~~~~~~~-~--------~------~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
|++++..+... . . ...|.|.....+|.|.|.|.+.|...
T Consensus 170 W~k~g~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~ 223 (233)
T 3bqu_C 170 WKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTS 223 (233)
T ss_dssp EEEC-----CCEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCCEEEEEEEC--
T ss_pred EEECCeeCCCCceEecCCccCCCCCEEEEEEEEECHHHhCCCCCEEEEEEeCCC
Confidence 99988765433 0 0 24677888888899999999998754
No 216
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.57 E-value=6.6e-14 Score=76.15 Aligned_cols=83 Identities=17% Similarity=0.262 Sum_probs=67.7
Q ss_pred eEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCcceeeEEEccCCCCCCceEEEEEEeCCCCceeee
Q psy11131 56 RVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGS 134 (150)
Q Consensus 56 ~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~ 134 (150)
.+...|....+.+|+.+.|.|.+. .| .+.+.|++++..+.... ...|.|.++..+|.|.|.|.+.|..|...+..
T Consensus 5 ~i~~~p~~~~v~~G~~~~l~C~~~g~p---~p~i~W~~~~~~~~~~~-~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~ 80 (91)
T 3bfo_A 5 QICVEPTSQKLMPGSTLVLQCVAVGSP---IPHYQWFKNELPLTHET-KKLYMVPYVDLEHQGTYWCHVYNDRDSQDSKK 80 (91)
T ss_dssp EEEECCCCEEECTTSCEEEECEEECSS---CCEEEEEETTEECTTCC-SSEEEESSCCGGGCEEEEEEEECSSCEEECCC
T ss_pred EEEECCCccEecCCCcEEEEEEeccCC---CCEEEEEcCCeeCCcCC-CCeEEECCCCHHhCEEEEEEEEcCCCCEEeee
Confidence 444566677889999999999998 88 89999999988776544 56899999999999999999999998545567
Q ss_pred EEEEEcCc
Q psy11131 135 AELQLGGT 142 (150)
Q Consensus 135 ~~l~v~~~ 142 (150)
+.+.|.+.
T Consensus 81 ~~l~V~~~ 88 (91)
T 3bfo_A 81 VEIIIDEL 88 (91)
T ss_dssp EEEEEC--
T ss_pred EEEEEehh
Confidence 88877553
No 217
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.57 E-value=6.8e-14 Score=77.12 Aligned_cols=84 Identities=24% Similarity=0.329 Sum_probs=68.9
Q ss_pred CceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCcc--------eeeEEEccCCCCCCceEEEEEE
Q psy11131 54 PYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRTS--------STSLVINPVGREDRGIYQCIAR 124 (150)
Q Consensus 54 ~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~~--------~~~l~~~~~~~~~~g~y~C~~~ 124 (150)
+|.+...+....+.+|+.+.|.|.+. .| .+.+.|++++..+..... ...|.|.++..+|.|.|.|.+.
T Consensus 6 ~P~i~~~~~~~~v~~G~~~~l~C~~~g~p---~p~v~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 82 (99)
T 3puc_A 6 KPVIVTGLQDTTVSSDSVAKFAVKATGEP---RPTAIWTKDGKAITQGGKYKLSEDKGGFFLEIHKTDTSDSGLYTCTVK 82 (99)
T ss_dssp EEEEEECCCCEEEESSSCEEEEEEEEEES---CCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEE
T ss_pred CCEEEecCccEEEeCCCcEEEEEEEEecC---CCEEEEEECCEECcCCCCEEEEEeCCEEEEEECCCCcccCEEEEEEEE
Confidence 44555666778899999999999999 88 899999999887754433 2379999999999999999999
Q ss_pred eCCCCceeeeEEEEEcC
Q psy11131 125 RSDGDVAQGSAELQLGG 141 (150)
Q Consensus 125 ~~~g~~~~~~~~l~v~~ 141 (150)
|..| .....+.|.|.+
T Consensus 83 n~~g-~~~~~~~l~V~~ 98 (99)
T 3puc_A 83 NSAG-SVSSSCKLTIKA 98 (99)
T ss_dssp ETTE-EEEEEEEEEEEC
T ss_pred eCCC-cEeEEEEEEEEe
Confidence 9998 577777777753
No 218
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.56 E-value=1.2e-13 Score=89.17 Aligned_cols=117 Identities=24% Similarity=0.295 Sum_probs=77.7
Q ss_pred CCceEEeC----CeEEEcCCCCCCCeEEEEEeccCCcc-eeEEEEEEEecCce-----------------------EEeC
Q psy11131 9 GPRTRVLG----PILAIEGVTAEDSGTYRCSSSNIGGE-ATAEVRLQVSTPYR-----------------------VDVN 60 (150)
Q Consensus 9 ~~~~~~~~----~~l~i~~~~~~d~G~Y~C~~~~~~~~-~~~~~~l~v~~~~~-----------------------~~~~ 60 (150)
+.|+.+.. .+|.|.+++.+|+|.|.|.+.+..+. ....+.|.|...+. ....
T Consensus 78 ~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~p~~pp~~~~~~~~~~~~~~v~~~~ 157 (268)
T 1x9q_A 78 PDRFSGSGSGTDFTLKINRVEAEDLGVYFCSQSTHVPWTFGGGTKLEIKSSADDAKKDAAKKDDAKKDDAKKDGGVKLDE 157 (268)
T ss_dssp CTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEC------------------------CGGGCEEEE
T ss_pred cccEEEEcCCCEEEEEECCCChhHCEEEEEEEecCCCceEcCCEEEEEccCccCCCccccccccccccccccccceEEEC
Confidence 45666542 47999999999999999999886442 22335666664321 1122
Q ss_pred CCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecC--ccc-------------------CCCcc----------eeeEEE
Q psy11131 61 PPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDG--RQI-------------------PGRTS----------STSLVI 108 (150)
Q Consensus 61 ~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~--~~~-------------------~~~~~----------~~~l~~ 108 (150)
+....+.+|+.+.|.|.+. .+.. .+.+.|++.. ..+ ....+ ...|.|
T Consensus 158 ~~~~~v~~G~~v~L~C~~~~~~~~-~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I 236 (268)
T 1x9q_A 158 TGGGLVQPGGAMKLSCVTSGFTFG-HYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVYLQM 236 (268)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGG-GCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEEEEE
T ss_pred CCceEecCCCcEEEEEEecCcccc-ccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEEEEE
Confidence 3346788999999999998 5400 3789998742 211 00111 247999
Q ss_pred ccCCCCCCceEEEEEEeC
Q psy11131 109 NPVGREDRGIYQCIARRS 126 (150)
Q Consensus 109 ~~~~~~~~g~y~C~~~~~ 126 (150)
.++..+|+|.|.|.+.+.
T Consensus 237 ~~v~~~DsG~Y~C~a~~~ 254 (268)
T 1x9q_A 237 NNLRVEDTGIYYCTGASY 254 (268)
T ss_dssp CSCCGGGCEEEEEEEEET
T ss_pred CCCCHHHCEEEEEEEccC
Confidence 999999999999999874
No 219
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.56 E-value=4.5e-14 Score=89.35 Aligned_cols=128 Identities=14% Similarity=0.175 Sum_probs=79.3
Q ss_pred CceEEeC------CeEEEcCCCCCCCeEEEEEeccCC--------cceeEEEEEEEe----cCceEEeCCCcEEEecCCc
Q psy11131 10 PRTRVLG------PILAIEGVTAEDSGTYRCSSSNIG--------GEATAEVRLQVS----TPYRVDVNPPLLSVHLDGS 71 (150)
Q Consensus 10 ~~~~~~~------~~l~i~~~~~~d~G~Y~C~~~~~~--------~~~~~~~~l~v~----~~~~~~~~~~~~~~~~g~~ 71 (150)
.|+.+.. .+|.|.+++.+|+|.|.|.+.+.. ........|.|. .+|.+...+....+..|+.
T Consensus 70 ~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~ 149 (232)
T 3qhz_H 70 TRLTISKDTSKSQVVLTMTNMDPVDTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGT 149 (232)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECCC---CCCCCCEECCCEEEEECSSCCBCCEEEEECC-------CE
T ss_pred CceEEEeccCCCEEEEEECcCChhhCEEEEEEEeeccCccccccceeeCCCeEEEEecCCCCCCEEEEecccccccCCCc
Confidence 5776653 359999999999999999998652 112233567775 2344442223334556899
Q ss_pred EEEEEEec-CCCCCCcEEEEeecCcccCC---------Ccc---eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEE
Q psy11131 72 ANFQCEIT-PYDSGPYLIAWFKDGRQIPG---------RTS---STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQ 138 (150)
Q Consensus 72 ~~l~C~~~-~p~~~~~~~~w~~~~~~~~~---------~~~---~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~ 138 (150)
+.|.|.+. .+.. ...+.|.+++..+.. ... .+.|.+......| |.|+|.+.+..+ .......+.
T Consensus 150 v~L~C~~~~~~P~-~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~ytC~v~~~~~-~~~~~~~l~ 226 (232)
T 3qhz_H 150 AALGCLVKDYFPE-PVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPS-NTKVDKRVE 226 (232)
T ss_dssp EEEEEEEEEEBSS-CCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGGGT-CCCEEEEEEGGG-TEEEEEECC
T ss_pred EEEEEEEeeEeCC-CeEEEEEECCEecceeeccceeCCCCCEEEEEEEEEchhhcCC-CEEEEEEEeCCC-CccEEEEeC
Confidence 99999998 3310 347889988753211 111 3567788887788 999999999876 344444444
Q ss_pred Ec
Q psy11131 139 LG 140 (150)
Q Consensus 139 v~ 140 (150)
+.
T Consensus 227 ~~ 228 (232)
T 3qhz_H 227 PK 228 (232)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 220
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.56 E-value=4.7e-14 Score=80.35 Aligned_cols=88 Identities=28% Similarity=0.342 Sum_probs=71.3
Q ss_pred CceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCcc------eeeEEEccCCCCCCceEEEEEEeC
Q psy11131 54 PYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRTS------STSLVINPVGREDRGIYQCIARRS 126 (150)
Q Consensus 54 ~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~~------~~~l~~~~~~~~~~g~y~C~~~~~ 126 (150)
+|.+...+....+.+|+.+.|.|.+. .| .+.+.|++++..+..... ...|.|.++..+|.|.|.|.+.|.
T Consensus 8 pP~i~~~p~~~~v~~G~~v~l~C~~~g~p---~p~i~W~k~g~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 84 (118)
T 2eo9_A 8 PPVIRQGPVNQTVAVDGTFVLSCVATGSP---VPTILWRKDGVLVSTQDSRIKQLENGVLQIRYAKLGDTGRYTCIASTP 84 (118)
T ss_dssp SCCCSBCCCCEEEETTCEEEEECBCCCSS---CCEEEEEESSSBCCTTSTTEEEEETTEEEEESCCGGGCCCEEEEEECS
T ss_pred CCEEEcCCCCEEEcCCCeEEEEEEEEecC---CCEEEEEECCEECcCCCCeEEEccCCEEEEccCCcCCCEEEEEEEEcC
Confidence 44555566778899999999999999 88 899999999887753221 457999999999999999999999
Q ss_pred CCCceeeeEEEEEcCcCcc
Q psy11131 127 DGDVAQGSAELQLGGTRNI 145 (150)
Q Consensus 127 ~g~~~~~~~~l~v~~~p~~ 145 (150)
.| .....+.|.|.+++..
T Consensus 85 ~g-~~~~~~~l~V~~~~~p 102 (118)
T 2eo9_A 85 SG-EATWSAYIEVQEFGVP 102 (118)
T ss_dssp SC-EEEEECCEEEECCSCC
T ss_pred CC-cEEEEEEEEEEeCCCC
Confidence 99 5777788888776543
No 221
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.55 E-value=3.2e-14 Score=90.58 Aligned_cols=116 Identities=22% Similarity=0.286 Sum_probs=79.7
Q ss_pred CceEEeC-----CeEEEcCCCCCCCeEEEEEeccC----CcceeEEEEEEEec------CceEE-eCCCcEEEecCCcEE
Q psy11131 10 PRTRVLG-----PILAIEGVTAEDSGTYRCSSSNI----GGEATAEVRLQVST------PYRVD-VNPPLLSVHLDGSAN 73 (150)
Q Consensus 10 ~~~~~~~-----~~l~i~~~~~~d~G~Y~C~~~~~----~~~~~~~~~l~v~~------~~~~~-~~~~~~~~~~g~~~~ 73 (150)
.|+.+.. .+|.|.+++.+|+|.|.|.+.+. .........|.|.. +|.+. ..+....+.+|+.+.
T Consensus 64 ~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~ 143 (245)
T 4ei6_B 64 DQFSVERPDGSYFTLKIQPTALEDSAVYFCASSFWGAYAEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKAT 143 (245)
T ss_dssp TTEEEECCTTSCEEEEECSCCGGGCEEEEEEEECSSTTCCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEE
T ss_pred CCEEEEeccCceEEEEECCCCHhHCEEEEEEEccCCCcceEEEcCCcEEEEecccCCCCCceEEEeCCCcccccCCCceE
Confidence 6777664 37999999999999999999853 22233445677763 33332 233333345689999
Q ss_pred EEEEec--CCCCCCc-EEEEeecCcccCCC---------------cc----eeeEEEccCCCCC-CceEEEEEEeCCC
Q psy11131 74 FQCEIT--PYDSGPY-LIAWFKDGRQIPGR---------------TS----STSLVINPVGRED-RGIYQCIARRSDG 128 (150)
Q Consensus 74 l~C~~~--~p~~~~~-~~~w~~~~~~~~~~---------------~~----~~~l~~~~~~~~~-~g~y~C~~~~~~g 128 (150)
|.|.+. .| .+ .+.|++++..+... .. ...|.+.....+| .|.|+|.+.+...
T Consensus 144 l~C~~~g~~p---~~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~ytC~v~~~~l 218 (245)
T 4ei6_B 144 LVCLATGFYP---DHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGL 218 (245)
T ss_dssp EEEEEEEEBS---SCEEEEEEETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCB
T ss_pred EEEEEeeEeC---CCeEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEECCC
Confidence 999988 44 44 89999988766431 11 2347777776667 8999999998754
No 222
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.55 E-value=1.3e-14 Score=92.50 Aligned_cols=116 Identities=22% Similarity=0.371 Sum_probs=79.8
Q ss_pred CceEEeC-----CeEEEcCCCCCCCeEEEEEeccCCc----ceeEEEEEEEec------CceEE-eCCCcEEEecCCcEE
Q psy11131 10 PRTRVLG-----PILAIEGVTAEDSGTYRCSSSNIGG----EATAEVRLQVST------PYRVD-VNPPLLSVHLDGSAN 73 (150)
Q Consensus 10 ~~~~~~~-----~~l~i~~~~~~d~G~Y~C~~~~~~~----~~~~~~~l~v~~------~~~~~-~~~~~~~~~~g~~~~ 73 (150)
.|+.+.. .+|.|.+++.+|+|.|.|.+.+..+ .....+.|.|.. +|.+. ..+....+.+|+.+.
T Consensus 65 ~r~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~~~~~~~~~~g~~v~ 144 (246)
T 4dzb_B 65 DKFLINHASLTLSTLTVTSAHPEDSSFYICSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKAT 144 (246)
T ss_dssp GGEEEEEEETTEEEEEECSCCGGGCEEEEEEECCSSGGGCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEE
T ss_pred CcEEEEecCCCEEEEEECCCCHHHCEEEEEEEecCCCCcceEEcCCEEEEEecCCCcccCCceEeecCCchhccCCCcEE
Confidence 4666543 3799999999999999999987533 222445677764 23332 233333344589999
Q ss_pred EEEEec-CCCCCCc--EEEEeecCcccCCC---------------cc----eeeEEEccCCCCC-CceEEEEEEeCCC
Q psy11131 74 FQCEIT-PYDSGPY--LIAWFKDGRQIPGR---------------TS----STSLVINPVGRED-RGIYQCIARRSDG 128 (150)
Q Consensus 74 l~C~~~-~p~~~~~--~~~w~~~~~~~~~~---------------~~----~~~l~~~~~~~~~-~g~y~C~~~~~~g 128 (150)
|.|.+. .| ++ .+.|++++..+... .. .+.|.+.....+| .|.|+|.+.+...
T Consensus 145 L~C~~~g~~---p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~~ 219 (246)
T 4dzb_B 145 LVCLATGFY---PDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGL 219 (246)
T ss_dssp EEEEEEEEB---SSCEEEEEEETTEEECTTEEECSSCEESSTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCB
T ss_pred EEEEEccCc---CCceEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEecCC
Confidence 999998 44 33 89999988766432 11 2347777777777 8999999998764
No 223
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.54 E-value=1.2e-13 Score=89.70 Aligned_cols=118 Identities=14% Similarity=0.211 Sum_probs=75.5
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcc---eeEEEEEEEecCceEEeC-CCc---EEEecCCcEEEEEEecCCCCCCcEEE
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGE---ATAEVRLQVSTPYRVDVN-PPL---LSVHLDGSANFQCEITPYDSGPYLIA 89 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~---~~~~~~l~v~~~~~~~~~-~~~---~~~~~g~~~~l~C~~~~p~~~~~~~~ 89 (150)
+.|.|.+++.+|+|.|+|.+.|..|. ......|.|..+...... ... ..+.+|+.+.|.|.+..| .+.+.
T Consensus 51 ~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~~v~v~~p~~~~~~~~~~~~~~~v~~G~~v~l~C~~~~p---~~~v~ 127 (289)
T 3mjg_X 51 SVLTLTNLTGLDTGEYFCTHNDSRGLETDERKRLYIFVPDPTVGFLPNDAEELFIFLTEITEITIPCRVTDP---QLVVT 127 (289)
T ss_dssp EEEEECSCCGGGCEEEEEECCC------CCCEEEEEECCCTTCCBCCCCHHHHEEEESSCCCEEECCCBSCT---TSCEE
T ss_pred EEEEEccCChhhCEEEEEEEcccCCCCcCcEEeEEEEEECCCcCcccCCCCcceEEeecCCeEEEEeEcCCC---CceEE
Confidence 47999999999999999999987765 344555555533221111 111 568899999999999866 67788
Q ss_pred EeecC--cccCCCcc-eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcC
Q psy11131 90 WFKDG--RQIPGRTS-STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGG 141 (150)
Q Consensus 90 w~~~~--~~~~~~~~-~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~ 141 (150)
|.+.+ ..+..... ...+. ...|.|.|.|.+.+..+...+..+.+.+..
T Consensus 128 w~~~~~~~~~~~~~~~~~~~~----~~~d~G~Y~C~a~n~~~~~~s~~~~l~v~~ 178 (289)
T 3mjg_X 128 LHEKKGDVALPVPYDHQRGFS----GIFEDRSYICKTTIGDREVDSDAYYVYRLQ 178 (289)
T ss_dssp EEESSCCSCCCCCEETTTEEE----ECCCSSEEEEEEEETTEEEECCCEEEEECC
T ss_pred EEeCCCCCccceeecCCcCee----eeccCcEEEEEEEeCCceeeeeeEEEEecC
Confidence 87754 33321110 11111 356899999999987764445556677665
No 224
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.54 E-value=8.1e-14 Score=95.79 Aligned_cols=115 Identities=14% Similarity=0.141 Sum_probs=81.7
Q ss_pred CceEEeC------CeEEEcCCCCCCCeEEEEEeccCCcc---eeEEEEEEEec----CceEE-eCCCcEEEecCCcEEEE
Q psy11131 10 PRTRVLG------PILAIEGVTAEDSGTYRCSSSNIGGE---ATAEVRLQVST----PYRVD-VNPPLLSVHLDGSANFQ 75 (150)
Q Consensus 10 ~~~~~~~------~~l~i~~~~~~d~G~Y~C~~~~~~~~---~~~~~~l~v~~----~~~~~-~~~~~~~~~~g~~~~l~ 75 (150)
.|+.+.. .+|.|.+++.+|+|.|.|.+.+..+. ....+.|.|.. +|.+. ..+. ..+.+|+.+.|.
T Consensus 66 ~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~-~~~~~g~~v~L~ 144 (444)
T 1igt_B 66 GRFTISRDNAKNTLYLQMSRLKSEDTAMYYCARHGGYYAMDYWGQGTTVTVSSAKTTAPSVYPLAPV-CGDTTGSSVTLG 144 (444)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECSSSCEEEEBCCEEEEECSCCCBCCEEEEECCC-SSCCCSSCEEEE
T ss_pred CceEEEEeCCCCeEEEEECCCCHHHCEEEEEEEecCCcccccccCcEEEEecCCCCCCCceeEeccc-ccCCCCCcEEEE
Confidence 5776642 48999999999999999999986443 22345777773 23332 2222 223689999999
Q ss_pred EEec--CCCCCCc-EEEEeecCcccCCC--------cc---eeeEEEccCCCCCCceEEEEEEeCCCC
Q psy11131 76 CEIT--PYDSGPY-LIAWFKDGRQIPGR--------TS---STSLVINPVGREDRGIYQCIARRSDGD 129 (150)
Q Consensus 76 C~~~--~p~~~~~-~~~w~~~~~~~~~~--------~~---~~~l~~~~~~~~~~g~y~C~~~~~~g~ 129 (150)
|.+. .| .+ .+.|++++..+... .. ...|.|..+...| |.|.|.+.|..+.
T Consensus 145 C~~~g~~P---~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~ 208 (444)
T 1igt_B 145 CLVKGYFP---EPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASS 208 (444)
T ss_dssp EEEEEEBS---SCCEEEEGGGTBCTTEEECCCEEETTEEEEEEEEEECSTTTTT-SCCEEEEEETTTT
T ss_pred EEEcceeC---CCcEEEEecCCCCCCeEecCccccCCcEEEEEEEEEchhhcCC-CeEEEEEEeCCCC
Confidence 9998 46 65 99999987653110 10 3468888888888 9999999999883
No 225
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.54 E-value=1.1e-13 Score=88.21 Aligned_cols=127 Identities=19% Similarity=0.281 Sum_probs=82.4
Q ss_pred CCCceEEeC------CeEEEcCCCCCCCeEEEEEeccCCc-c------eeEEEEEEEecC-------ceEEe-CCCcEEE
Q psy11131 8 PGPRTRVLG------PILAIEGVTAEDSGTYRCSSSNIGG-E------ATAEVRLQVSTP-------YRVDV-NPPLLSV 66 (150)
Q Consensus 8 ~~~~~~~~~------~~l~i~~~~~~d~G~Y~C~~~~~~~-~------~~~~~~l~v~~~-------~~~~~-~~~~~~~ 66 (150)
.+.|+.+.. .+|.|.+++.+|+|.|.|.+.+... . ....+.|.|... |.... .+....+
T Consensus 65 ~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~p~~~v~~p~~~~~ 144 (242)
T 1hxm_B 65 PSGKFEVDRIPETSTSTLTIHNVEKQDIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLDADVSPKPTIFLPSIAET 144 (242)
T ss_dssp CTTSEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCCSCCSCBCCCCCCCGGGG
T ss_pred cCCeEEEEecCCCcEEEEEECCCCcccCEEEEEeeecCCccccccceeEcCcEEEEEcccccCCCcCCCceEECCChhhc
Confidence 356777652 4799999999999999999987521 1 123457888752 22221 1222234
Q ss_pred ecCCcEEEEEEec--CCCCCCcEEEEeecCc-ccCCCc---------c---eeeEEEccCCCCCCceEEEEEEeCCCCce
Q psy11131 67 HLDGSANFQCEIT--PYDSGPYLIAWFKDGR-QIPGRT---------S---STSLVINPVGREDRGIYQCIARRSDGDVA 131 (150)
Q Consensus 67 ~~g~~~~l~C~~~--~p~~~~~~~~w~~~~~-~~~~~~---------~---~~~l~~~~~~~~~~g~y~C~~~~~~g~~~ 131 (150)
.+|+.+.|.|.+. .|. .+.+.|.+++. .+.... . .+.|.+..... + |.|.|.+.|..+ ..
T Consensus 145 ~~g~~v~L~C~~~g~~P~--~~~v~W~~~~~~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-g~y~C~v~n~~~-~~ 219 (242)
T 1hxm_B 145 KLQKAGTYLCLLEKFFPD--VIKIHWEEKKSNTILGSQEGNTMKTNDTYMKFSWLTVPEKSL-D-KEHRCIVRHENN-KN 219 (242)
T ss_dssp GSSSCEEEEEEEEEESSC--CEEEEEEESSSCCCCCCEECCCEECSSSEEEEEEEEECTGGG-G-SCEEEEEEETTS-GG
T ss_pred ccCCCceEEEEEeeEECC--CeEEEEEcCCCEeecCccccceecCCCcEEEEEEEEEccccC-C-CEEEEEEEeCCC-CC
Confidence 4689999999998 461 37999999876 442211 1 24677766553 4 999999999887 33
Q ss_pred eeeEEEEE
Q psy11131 132 QGSAELQL 139 (150)
Q Consensus 132 ~~~~~l~v 139 (150)
.....+.+
T Consensus 220 ~~~~~~~~ 227 (242)
T 1hxm_B 220 GVDQEIIF 227 (242)
T ss_dssp GSCEEEEE
T ss_pred CceeEeec
Confidence 34444544
No 226
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.53 E-value=7.9e-14 Score=89.21 Aligned_cols=115 Identities=21% Similarity=0.313 Sum_probs=59.5
Q ss_pred CCCCCCeEEEEEeccCCcceeEEEEEEEecCceEEeCCCcEEEecCCcEEEEEEec-CCC--CCCcEEEEeecC--ccc-
Q psy11131 24 VTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCEIT-PYD--SGPYLIAWFKDG--RQI- 97 (150)
Q Consensus 24 ~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~--~~~~~~~w~~~~--~~~- 97 (150)
+..+|+|.|+|.+. |.......+.+..++.+...+....+.+|+.+.|.|.+. .|. ...+.+.|+++. ..+
T Consensus 11 v~~~dsg~Y~C~a~---g~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~ 87 (254)
T 2c1o_A 11 VRPGTSVKLSCKAS---GYSFTNYWMNWLRELVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPK 87 (254)
T ss_dssp ------------------------------CCCEEEECSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSCCE
T ss_pred ecCCccEEEEEcCc---hhhhhhhhhheeeceeEEeCCceEEecCCCcEEEEeeccCcccccCCCCceEEEEeCCCCCce
Confidence 68899999999998 333334444444455666667778899999999999998 550 001889998743 211
Q ss_pred ---------CC--Ccc--------eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcC
Q psy11131 98 ---------PG--RTS--------STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGG 141 (150)
Q Consensus 98 ---------~~--~~~--------~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~ 141 (150)
.. ..+ ...|.|.++..+|.|.|.|.+.+..+........+.|..
T Consensus 88 ~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~ 150 (254)
T 2c1o_A 88 RLIYLVSKLDSGDPDRFTGSGSGTDFTLKISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELKR 150 (254)
T ss_dssp EEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSSSSCEEBCCEEEEECC
T ss_pred EEEEeccccCCCccceEEEecCCCEEEEEECcCCcccCEEEEEEEEcCcceEecCCEEEEECC
Confidence 00 011 237999999999999999999987553233334555553
No 227
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.53 E-value=4.9e-14 Score=78.08 Aligned_cols=83 Identities=19% Similarity=0.199 Sum_probs=67.6
Q ss_pred ceEEeCCCcEEEecCCcEEEEEEecCCCCCCcEEEEeecCcccCCCcc--------eeeEEEccCCCCCCceEEEEEEeC
Q psy11131 55 YRVDVNPPLLSVHLDGSANFQCEITPYDSGPYLIAWFKDGRQIPGRTS--------STSLVINPVGREDRGIYQCIARRS 126 (150)
Q Consensus 55 ~~~~~~~~~~~~~~g~~~~l~C~~~~p~~~~~~~~w~~~~~~~~~~~~--------~~~l~~~~~~~~~~g~y~C~~~~~ 126 (150)
+.+...+....+.+|+.+.|.|.+ .| .+.+.|++++..+....+ ...|.|.++..+|.|.|.|.+.|.
T Consensus 8 ~~~~~~~~~~~v~~G~~v~l~C~v-~p---~p~v~W~k~g~~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 83 (100)
T 2yuz_A 8 LKILTPLTDQTVNLGKEICLKCEI-SE---NIPGKWTKNGLPVQESDRLKVVQKGRIHKLVIANALTEDEGDYVFAPDAY 83 (100)
T ss_dssp CCCSBCCCCEEEETTSCCCEEEEC-SS---CCCEEEEETTEECCCCSSEEEEECSSEEEEEESSCCGGGCSEEEEEESSS
T ss_pred CEEeccCCceEEcCCCCEEEEEEe-CC---CCeEEEEECCEECCCCCcEEEEEeCCEEEEEECCCChhhCEEEEEEEcCC
Confidence 344455667789999999999999 88 889999999988765443 247999999999999999999987
Q ss_pred CCCceeeeEEEEEcCcCc
Q psy11131 127 DGDVAQGSAELQLGGTRN 144 (150)
Q Consensus 127 ~g~~~~~~~~l~v~~~p~ 144 (150)
..+.++.|.|.++|.
T Consensus 84 ---~~~~~a~L~V~~~P~ 98 (100)
T 2yuz_A 84 ---NVTLPAKVHVISGPS 98 (100)
T ss_dssp ---CCCEEEEEEEECCSC
T ss_pred ---CeeEEEEEEEeCCCC
Confidence 346778888888774
No 228
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.53 E-value=4.9e-13 Score=94.71 Aligned_cols=116 Identities=19% Similarity=0.298 Sum_probs=83.1
Q ss_pred CceEEeC-CeEEEcCCCCCCCeEEEEEeccCCcce-eEEEEEEEecCceE-EeCCCcEEEecCCcE-EEEEEec--CCCC
Q psy11131 10 PRTRVLG-PILAIEGVTAEDSGTYRCSSSNIGGEA-TAEVRLQVSTPYRV-DVNPPLLSVHLDGSA-NFQCEIT--PYDS 83 (150)
Q Consensus 10 ~~~~~~~-~~l~i~~~~~~d~G~Y~C~~~~~~~~~-~~~~~l~v~~~~~~-~~~~~~~~~~~g~~~-~l~C~~~--~p~~ 83 (150)
.|..+.. ++|.|.+++.+|+|.|+|.+.+..+.. ...+.|.|..+|.. ...+....+..+... .|.|.+. .|
T Consensus 424 ~r~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~p~i~~~~~~~~~~~~~~~l~C~~~~~~P-- 501 (581)
T 3o3u_N 424 SVARVLPNGSLFLPAVGIQDEGIFRCQAMNRNGKETKSNYRVRVYQIPGKPEIVDSASELTAGVPNKVGTCVSEGSYP-- 501 (581)
T ss_dssp GTSEECTTSCEEESSCCGGGCEEEEEEEECTTSCEEEEEEEEEEEBCCCCCEEESCCSEECTTSCEEEEEEEEEEEBS--
T ss_pred CcEEEcCCceEEEeccccccCeEEEEEEEcCCCceeEEEEEEEEEcCCCCCEEEcCCcccccCCceeEEEEECCCCCC--
Confidence 3455544 789999999999999999999987776 67788999864321 111112234555554 5699998 48
Q ss_pred CCcEEEEeecCcccCCCcc-------------------eeeEEEccCCCCC-CceEEEEEEeCCC
Q psy11131 84 GPYLIAWFKDGRQIPGRTS-------------------STSLVINPVGRED-RGIYQCIARRSDG 128 (150)
Q Consensus 84 ~~~~~~w~~~~~~~~~~~~-------------------~~~l~~~~~~~~~-~g~y~C~~~~~~g 128 (150)
.+.+.|++++..+..... .+.|.+..+..+| .+.|+|.+.|..+
T Consensus 502 -~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~g~y~~~s~L~i~~~~~~d~~~~y~C~~~n~~~ 565 (581)
T 3o3u_N 502 -AGTLSWHLDGKPLVPNEKGVSVKEQTRRHPETGLFTLQSELMVTPARGGDPRPTFSCSFSPGLP 565 (581)
T ss_dssp -CCEEEEEETTEECCTTSTTEEEEEEEEECTTTCCEEEEEEEEECCCTTSCSCCCEEEEEECSSC
T ss_pred -CCeEEEEECCEECCCCCCeEEEEeeeEEcCCCceEEEEEEEEEEeccccCCCceEEEEEeccCC
Confidence 899999999887653221 2458888877444 7889999999864
No 229
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.53 E-value=2.3e-13 Score=75.03 Aligned_cols=83 Identities=19% Similarity=0.355 Sum_probs=67.1
Q ss_pred ceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCcc----------eeeEEEccCCCCCCceEEEEE
Q psy11131 55 YRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRTS----------STSLVINPVGREDRGIYQCIA 123 (150)
Q Consensus 55 ~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~~----------~~~l~~~~~~~~~~g~y~C~~ 123 (150)
|.+...+....+.+|+.+.|.|.+. .| .+.+.|++++..+..... ...|.|.++..+|.|.|.|.+
T Consensus 6 P~i~~~~~~~~~~~G~~~~l~C~~~g~p---~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a 82 (100)
T 3irg_A 6 PKIEALPSDISIDEGKVLTVACAFTGEP---TPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSL 82 (100)
T ss_dssp EEECCCCSEEEEETTSEEEEEEEEEEES---CCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEE
T ss_pred CeeecCCCcEEEcCCCcEEEEEEEEEcC---CCceEEEECCEEeecCCCCEEEEEecCCEEEEEEeecCcccCEEEEEEE
Confidence 3444556667889999999999999 88 899999998877653221 267999999999999999999
Q ss_pred EeCCCCceeeeEEEEEcC
Q psy11131 124 RRSDGDVAQGSAELQLGG 141 (150)
Q Consensus 124 ~~~~g~~~~~~~~l~v~~ 141 (150)
.|..| ..+..+.|.|..
T Consensus 83 ~n~~g-~~~~~~~l~V~~ 99 (100)
T 3irg_A 83 GNEFG-SDSATVNIHIRS 99 (100)
T ss_dssp EETTE-EEEEEEEEEEEC
T ss_pred EeCCC-cEEEEEEEEEEe
Confidence 99998 577777777753
No 230
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.52 E-value=1.8e-14 Score=98.75 Aligned_cols=117 Identities=14% Similarity=0.170 Sum_probs=82.6
Q ss_pred CCceEEeC------CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEec----CceEEeCCCcEEEecCCcEEEEEEe
Q psy11131 9 GPRTRVLG------PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVST----PYRVDVNPPLLSVHLDGSANFQCEI 78 (150)
Q Consensus 9 ~~~~~~~~------~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~----~~~~~~~~~~~~~~~g~~~~l~C~~ 78 (150)
+.|+.+.. .+|.|.+++.+|+|.|+|.+.+..+.....+.|.|.. +|.+...+....+.+|+.+.|.|.+
T Consensus 64 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~G~~v~L~C~~ 143 (434)
T 1igy_B 64 KDKATLTRDRSSNTANIHLSSLTSDDSAVYYCVREGEVPYWGQGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLV 143 (434)
T ss_dssp TTTEECCBCGGGCBBCEEECSBCGGGCSEECCCCSSSSCCCCCCEECEECCSCCBCCCEEEECCCCCCCCTTEEEEEEEE
T ss_pred cccEEEEEECCCCEEEEEECCCChHHCEEEEEEEEccccccCCceEEEEccCCCCCCeEEEcCCccccCCCCcEEEEEEE
Confidence 35776543 3799999999999999999988544444456777763 2333322222234689999999999
Q ss_pred c-C-CCCCCc-EEEEeecCcccCC--------Ccc---eeeEEEccCCCCCCceEEEEEEeCCCC
Q psy11131 79 T-P-YDSGPY-LIAWFKDGRQIPG--------RTS---STSLVINPVGREDRGIYQCIARRSDGD 129 (150)
Q Consensus 79 ~-~-p~~~~~-~~~w~~~~~~~~~--------~~~---~~~l~~~~~~~~~~g~y~C~~~~~~g~ 129 (150)
. . | .+ .+.|++++..+.. ... ...|.|..+..+| |.|.|.+.|..+.
T Consensus 144 ~g~~P---~p~~v~W~k~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~ 204 (434)
T 1igy_B 144 KGYFP---EPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPS-ETVTCNVAHPASS 204 (434)
T ss_dssp EEEBS---SCCEEEETTTTBCSSEEECCCEECSSCEEEEEEEEEETTTTTS-SCCEEEEECTTTT
T ss_pred eeecC---CCeEEEEeeCCcCCCeEecCceecCCcEEEEEEEEEcchhcCC-CcEEEEEEeCCCC
Confidence 8 4 6 66 9999988764310 011 3468888888788 9999999998873
No 231
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.52 E-value=5.5e-13 Score=92.47 Aligned_cols=124 Identities=15% Similarity=0.225 Sum_probs=83.6
Q ss_pred CCceEEeC------CeEEEcCCCCCCCeEEEEEeccCCcc------eeEEEEEEEec----CceEEeCCCcEEEecCCcE
Q psy11131 9 GPRTRVLG------PILAIEGVTAEDSGTYRCSSSNIGGE------ATAEVRLQVST----PYRVDVNPPLLSVHLDGSA 72 (150)
Q Consensus 9 ~~~~~~~~------~~l~i~~~~~~d~G~Y~C~~~~~~~~------~~~~~~l~v~~----~~~~~~~~~~~~~~~g~~~ 72 (150)
..|+.+.. .+|.|.++..+|+|.|+|.+.+..+. ....+.|.|.. +|.+...+. ....+|+.+
T Consensus 66 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~-~~~~~g~~v 144 (475)
T 1iga_A 66 RGRVTFTRDTSATTAYMGLSSLRPEDTAVYYCARDPYGGGKSEFDYWGQGTLVTVSSASPTSPKVFPLSL-CSTQPDGNV 144 (475)
T ss_pred CCceEEEEcCCCCeEEEEECCCChhhCEEEEEEEeccCCCccceeeecCceEEEeccCCCcCCeEEecCc-cccCCCCeE
Confidence 35666642 47999999999999999999886541 22345777763 233332221 122689999
Q ss_pred EEEEEec-C-CCCCC-c-EEEEeecCcccCC---------C-cc---eeeEEEccCCCCCCceEEEEEEeCCCCceeeeE
Q psy11131 73 NFQCEIT-P-YDSGP-Y-LIAWFKDGRQIPG---------R-TS---STSLVINPVGREDRGIYQCIARRSDGDVAQGSA 135 (150)
Q Consensus 73 ~l~C~~~-~-p~~~~-~-~~~w~~~~~~~~~---------~-~~---~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~ 135 (150)
.|.|.+. . | . + .+.|++++..... . .. .+.|.|......|.|.|.|.+.|..+......+
T Consensus 145 ~L~C~~~g~~P---~~p~~v~W~~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~v 221 (475)
T 1iga_A 145 VIACLVQGFFP---QEPLSVTWSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPSQDVTV 221 (475)
T ss_pred EEEEEEeeecC---CCceEEEEcCCCcccceEeCCceecCCCCcEEEEEEEEechhHcCCCceEEEEEEECCCCceeeeE
Confidence 9999998 4 6 5 4 9999987643211 1 11 235777777778999999999998763333444
Q ss_pred E
Q psy11131 136 E 136 (150)
Q Consensus 136 ~ 136 (150)
.
T Consensus 222 ~ 222 (475)
T 1iga_A 222 P 222 (475)
T ss_pred e
Confidence 4
No 232
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.52 E-value=1.2e-14 Score=90.52 Aligned_cols=109 Identities=14% Similarity=0.183 Sum_probs=73.0
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeE--EEEE--EEecCceEEeCCCcEEEecCCcEEEEEEec--CCCCCC-cEEE
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATA--EVRL--QVSTPYRVDVNPPLLSVHLDGSANFQCEIT--PYDSGP-YLIA 89 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~--~~~l--~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~--~p~~~~-~~~~ 89 (150)
..|.|.++..+|+|.|+|.+.+..+.... .+.+ .+..+|.+...+.......|+.+.|.|.+. .| . ..+.
T Consensus 68 ~~L~I~~~~~~D~G~Y~C~a~~~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P---~~~~v~ 144 (207)
T 2vol_A 68 SELPIMHQDWLNGKEFKCRVNSAAFPAPIEKTISKTKGRPKAPQVYTLPPPKEQMAKDKVSLTCMITDFFP---EDITVE 144 (207)
T ss_dssp EEEECCHHHHHTTCCEEEEEECTTCSSCEEEEECCCCCCCBCCEEEEECCCTGGGSSSEEEEEEEEEEEBS---SCCEEE
T ss_pred EEEEEehhHcCCCCEEEEEEEccCCCCceEEEeccCCCCCcCCeEEEeCCCHHHhcCCceEEEEEEeeEEC---CCCEEE
Confidence 57999999999999999999987665322 2222 334455554333221123588999999998 45 4 4999
Q ss_pred EeecCcccCCCcc-------------eeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 90 WFKDGRQIPGRTS-------------STSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 90 w~~~~~~~~~~~~-------------~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
|++++..+..... .+.|.+.....+|.|.|+|.+.|...
T Consensus 145 W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~ytC~a~n~~l 196 (207)
T 2vol_A 145 WESNGQPAENYKNTQPIMDTDGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGL 196 (207)
T ss_dssp EEETTEECSCEEECCCEECTTSCEEEEEEEEEEHHHHSSCCEEEEEEECTTS
T ss_pred EEECCEeccCcccCCceECCCCCEEEEEEEEECHHHcCCCCEEEEEEECCCC
Confidence 9999876542210 12344544445678999999998765
No 233
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.52 E-value=5e-13 Score=83.23 Aligned_cols=105 Identities=17% Similarity=0.229 Sum_probs=77.3
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCceEE-eCCCcEEEecCCcEEEEEEec-C-CCCCC----cEEE
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVD-VNPPLLSVHLDGSANFQCEIT-P-YDSGP----YLIA 89 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~-~~~~~~~~~~g~~~~l~C~~~-~-p~~~~----~~~~ 89 (150)
..|.|.+++.+|.|.|.|.+.+..+.....+.|+|.++|... ..+. ....|+.. |.|.+. . | . +.+.
T Consensus 59 ~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~ltV~~~P~~~~i~~~--~~~~g~~~-l~C~a~g~~P---~~~~~lti~ 132 (210)
T 1gsm_A 59 SVLTVRNASLSAAGTRVCVGSCGGRTFQHTVQLLVYAFPNQLTVSPA--ALVPGDPE-VACTAHKVTP---VDPNALSFS 132 (210)
T ss_dssp EEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCSEEEEESS--SBCTTCCE-EEEEEEEEBC---CCTTTEEEE
T ss_pred cEEEECccCcccCceEEEEEEeCCCceEEEEEEEEEecCCCcEEccc--eEEeCCce-EEEEeCCCCC---CCCCCcEEE
Confidence 679999999999999999999987777888999999876533 2332 45577888 999998 4 5 3 4899
Q ss_pred EeecCcccCCCc----------------c------eeeEEEccCCCCCCceEEEEEEeCC
Q psy11131 90 WFKDGRQIPGRT----------------S------STSLVINPVGREDRGIYQCIARRSD 127 (150)
Q Consensus 90 w~~~~~~~~~~~----------------~------~~~l~~~~~~~~~~g~y~C~~~~~~ 127 (150)
|++++..+.... . .+.+.+.....++.+.|+|.|.+..
T Consensus 133 Wlk~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vts~~~~~~~~~D~~~~~tC~a~~~L 192 (210)
T 1gsm_A 133 LLVGGQELEGAQALGPEVQEEEEEPQGDEDVLFRVTERWRLPPLGTPVPPALYCQATMRL 192 (210)
T ss_dssp EEETTEECTTCEECCCEEEECTTCCSSCCCCCEEEEEEEECCCCCSSCCSEEEEEEEEEE
T ss_pred EEECCEEcccccccccceecccccccCCcceEEEEEEEEeecCCcccCCceEEEEEEeeC
Confidence 999987764221 0 1223333445556679999999764
No 234
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.52 E-value=8.1e-13 Score=72.56 Aligned_cols=80 Identities=20% Similarity=0.324 Sum_probs=66.6
Q ss_pred eCCCcEEEecCCcEEEEEEec-C-CCCCCcEEEEeecCcccCCCcc--------eeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 59 VNPPLLSVHLDGSANFQCEIT-P-YDSGPYLIAWFKDGRQIPGRTS--------STSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 59 ~~~~~~~~~~g~~~~l~C~~~-~-p~~~~~~~~w~~~~~~~~~~~~--------~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
..+....+.+|+.+.|.|.+. . | .+.+.|++++..+..... ...|.|.++...|.|.|.|.+.|..|
T Consensus 6 ~~~~~~~v~~G~~v~l~C~~~g~~p---~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g 82 (97)
T 2bk8_A 6 GQIMHAVGEEGGHVKYVCKIENYDQ---STQVTWYFGVRQLENSEKYEITYEDGVAILYVKDITKLDDGTYRCKVVNDYG 82 (97)
T ss_dssp CCCCCEEECTTCCEEEEEEEESCCT---TCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSC
T ss_pred ccCcCEEEcCCCcEEEEEEEeccCC---CCEEEEEECCEECcCCCCEEEEEcCCeEEEEEecCChhhCeEEEEEEECCCC
Confidence 345567889999999999999 6 8 899999999887654433 23899999999999999999999999
Q ss_pred CceeeeEEEEEcCc
Q psy11131 129 DVAQGSAELQLGGT 142 (150)
Q Consensus 129 ~~~~~~~~l~v~~~ 142 (150)
.....+.|.|.+.
T Consensus 83 -~~~~~~~l~V~~~ 95 (97)
T 2bk8_A 83 -EDSSYAELFVKGV 95 (97)
T ss_dssp -EEEEEEEEEETTT
T ss_pred -eEeEEEEEEEEec
Confidence 5777888888754
No 235
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.51 E-value=7.2e-14 Score=88.72 Aligned_cols=116 Identities=21% Similarity=0.304 Sum_probs=78.4
Q ss_pred CceEEeC-----CeEEEcCCCCCCCeEEEEEeccC---CcceeEEEEEEEec------CceEE-eCCCcEEEecCCcEEE
Q psy11131 10 PRTRVLG-----PILAIEGVTAEDSGTYRCSSSNI---GGEATAEVRLQVST------PYRVD-VNPPLLSVHLDGSANF 74 (150)
Q Consensus 10 ~~~~~~~-----~~l~i~~~~~~d~G~Y~C~~~~~---~~~~~~~~~l~v~~------~~~~~-~~~~~~~~~~g~~~~l 74 (150)
.|+.+.. .+|.|.+++.+|+|.|.|.+.+. .........|.|.. +|.+. ..+....+..|+.+.|
T Consensus 63 ~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~L 142 (240)
T 3q5y_A 63 SRFSVQQFDDYHSEMNMSALELEDSAMYFCASSLRWGDEQYFGPGTRLTVLEDLRNVTPPKVSLFEPSKAEIANKQKATL 142 (240)
T ss_dssp TTEEEEECTTSCEEEEECSCCGGGCEEEEEEEESSTTBCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEE
T ss_pred CeEEEEeCCCCEEEEEECcCChhHCEEEEEEEccCCCcceEEcCCEEEEEeccccCCCCCeeEEeCCchhhcccCCceEE
Confidence 5666543 47999999999999999999732 22233445677763 23332 2333333446889999
Q ss_pred EEEec--CCCCCCc-EEEEeecCcccCCCcc---------------eeeEEEccCCCCC-CceEEEEEEeCCC
Q psy11131 75 QCEIT--PYDSGPY-LIAWFKDGRQIPGRTS---------------STSLVINPVGRED-RGIYQCIARRSDG 128 (150)
Q Consensus 75 ~C~~~--~p~~~~~-~~~w~~~~~~~~~~~~---------------~~~l~~~~~~~~~-~g~y~C~~~~~~g 128 (150)
.|.+. .| .+ .+.|++++..+..... .+.|.+......| .|.|+|.+.+...
T Consensus 143 ~C~~~g~~P---~~~~v~W~~~g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~~ 212 (240)
T 3q5y_A 143 VCLARGFFP---DHVELSWWVNGKEVHSGVSTDPQAYKESNYSYSLSSRLRVSATFWHNPRNHFRCQVQFHGL 212 (240)
T ss_dssp EEEEEEEBS---SCEEEEEEETTEEECTTEEECSSCEEEETTEEEEEEEEEEEHHHHSCTTCEEEEEEEECCB
T ss_pred EEEEeeEEC---CCeEEEEEECCEECcCcEecCCceeeCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCC
Confidence 99998 45 45 7899999877643211 2347777777777 6799999998654
No 236
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.51 E-value=7.2e-14 Score=78.18 Aligned_cols=83 Identities=20% Similarity=0.418 Sum_probs=69.3
Q ss_pred CceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCcc--------eeeEEEccCCCCCCceEEEEEE
Q psy11131 54 PYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRTS--------STSLVINPVGREDRGIYQCIAR 124 (150)
Q Consensus 54 ~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~~--------~~~l~~~~~~~~~~g~y~C~~~ 124 (150)
++.+...+....+.+|+.+.|.|.+. .| .+.+.|++++..+..... ...|.|.++...|.|.|.|.+.
T Consensus 14 ~~~i~~~p~~~~v~~G~~v~L~C~~~g~p---~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 90 (106)
T 1nct_A 14 AARILTKPRSMTVYEGESARFSCDTDGEP---VPTVTWLRKGQVLSTSARHQVTTTKYKSTFEISSVQASDEGNYSVVVE 90 (106)
T ss_dssp CCEEEECCCCEEESSSSCEECCEEEECSS---CCBCCBCSSSSCCTTCSSEEEEECSSEEEEEECCCCSSCCSEEEECCB
T ss_pred CCEEEECCCCEEEeCCCcEEEEEEEEEcC---CCEEEEEECCEECCCCCCEEEEECCCEEEEEECcCCchhCEEEEEEEE
Confidence 45566677788899999999999999 88 899999999877654433 3689999999999999999999
Q ss_pred eCCCCceeeeEEEEEc
Q psy11131 125 RSDGDVAQGSAELQLG 140 (150)
Q Consensus 125 ~~~g~~~~~~~~l~v~ 140 (150)
|..| .....+.|.|.
T Consensus 91 N~~G-~~~~~~~l~V~ 105 (106)
T 1nct_A 91 NSEG-KQEAEFTLTIQ 105 (106)
T ss_dssp CSSC-BCCEEEEEEEC
T ss_pred eCCC-eEEEEEEEEEE
Confidence 9999 57777777775
No 237
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.50 E-value=7.2e-14 Score=88.98 Aligned_cols=117 Identities=22% Similarity=0.290 Sum_probs=77.4
Q ss_pred CceEEeC-----CeEEEcCCCCCCCeEEEEEeccCCc------ceeEEEEEEEec------CceEEe-CCCcEEEecCCc
Q psy11131 10 PRTRVLG-----PILAIEGVTAEDSGTYRCSSSNIGG------EATAEVRLQVST------PYRVDV-NPPLLSVHLDGS 71 (150)
Q Consensus 10 ~~~~~~~-----~~l~i~~~~~~d~G~Y~C~~~~~~~------~~~~~~~l~v~~------~~~~~~-~~~~~~~~~g~~ 71 (150)
.|+.+.. .+|.|.+++.+|+|.|.|.+.+..+ .......|.|.. +|.+.. .+....+..|+.
T Consensus 62 ~R~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~ 141 (245)
T 3nfj_J 62 QNLSASRPQDRQFILSSKKLLLSDSGFYLCAWSVSVGAGVPTIYFGEGSWLTVVEDLNKVFPPEVAVFEPSEAEISHTQK 141 (245)
T ss_dssp CSSEEEEEETTEEEEEESSCCGGGCEEEEEEEECCTTTSSCCCEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSE
T ss_pred CcEEEEecCCCEEEEEECCCChhhCEEEEEEEeeccCCCceeEEECCCeEEEEEcccCCCCCCceEeecCCcccccCCCc
Confidence 5665543 4799999999999999999988221 223445677765 333322 222222344889
Q ss_pred EEEEEEec--CCCCCCcEEEEeecCcccCCCc---------------c----eeeEEEccCCCCC-CceEEEEEEeCCC
Q psy11131 72 ANFQCEIT--PYDSGPYLIAWFKDGRQIPGRT---------------S----STSLVINPVGRED-RGIYQCIARRSDG 128 (150)
Q Consensus 72 ~~l~C~~~--~p~~~~~~~~w~~~~~~~~~~~---------------~----~~~l~~~~~~~~~-~g~y~C~~~~~~g 128 (150)
+.|.|.+. .|. ...+.|++++..+.... . ...|.+......| .|.|+|.+.+...
T Consensus 142 ~~l~C~~~g~~p~--~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~~YtC~v~~~~~ 218 (245)
T 3nfj_J 142 ATLVCLATGFFPD--HVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGL 218 (245)
T ss_dssp EEEEEEEEEEBSS--CEEEEEEETTEEECTTEEECSSCEESSSSSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCB
T ss_pred eEEEEEEccCcCC--CEEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEECCC
Confidence 99999998 341 34789999987664311 1 2466777666666 6699999998754
No 238
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=99.49 E-value=1.7e-13 Score=87.72 Aligned_cols=117 Identities=17% Similarity=0.196 Sum_probs=74.4
Q ss_pred CCceEEeC------CeEEEcCCCCCCCeEEEEEeccCC----------------------cceeEEEEEEEe----cCce
Q psy11131 9 GPRTRVLG------PILAIEGVTAEDSGTYRCSSSNIG----------------------GEATAEVRLQVS----TPYR 56 (150)
Q Consensus 9 ~~~~~~~~------~~l~i~~~~~~d~G~Y~C~~~~~~----------------------~~~~~~~~l~v~----~~~~ 56 (150)
..|+.+.. .+|.|.+++.+|+|.|.|.+.+.. ......+.|.|. .+|.
T Consensus 64 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~ 143 (248)
T 3u2s_H 64 WGRLSISRDNSKDTLYLQMNSLRVEDTATYFCVREAGGPDYRNGYNYYDFYDGYYNYHYMDVWGKGTTVTVSSASTKGPS 143 (248)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEEECEEETTEEEECGGGCCEEEEEEEEECCCEEEEECSCCCBCCE
T ss_pred CCcEEEEecCCCCEEEEEECCCCHHHCEEEEEEEeCCCCccccccccccccccccccccceeeCCCEEEEEcccCCCCCE
Confidence 36777643 359999999999999999987631 111223566776 2333
Q ss_pred EEeCCCcEEEecCCcEEEEEEec--CCCCCCcEEEEeecCcccCC---------Ccc---eeeEEEccCCCCCCceEEEE
Q psy11131 57 VDVNPPLLSVHLDGSANFQCEIT--PYDSGPYLIAWFKDGRQIPG---------RTS---STSLVINPVGREDRGIYQCI 122 (150)
Q Consensus 57 ~~~~~~~~~~~~g~~~~l~C~~~--~p~~~~~~~~w~~~~~~~~~---------~~~---~~~l~~~~~~~~~~g~y~C~ 122 (150)
+...+.......|+.+.|.|.+. .|. ...+.|.+++..+.. +.. .+.|.+......+ |.|+|.
T Consensus 144 v~~~~~~~~~~~g~~~~L~C~~~~~~P~--~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~ 220 (248)
T 3u2s_H 144 VFPLAPSSKSTSGGTAALGCLVKDYFPE--PVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICN 220 (248)
T ss_dssp EEEECCC------CEEEEEEEEEEEBSS--CCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGBTT-BCCEEE
T ss_pred EEEeCCCccccCCCcEEEEEEEeeEECC--CeEEEEeECCccCceeecCceECCCCCEEEEEEEEEChhhcCC-CeEEEE
Confidence 33222333345689999999998 442 468999988753211 111 3467777777777 999999
Q ss_pred EEeCCC
Q psy11131 123 ARRSDG 128 (150)
Q Consensus 123 ~~~~~g 128 (150)
+.+..+
T Consensus 221 v~h~~~ 226 (248)
T 3u2s_H 221 VNHKPS 226 (248)
T ss_dssp EEEGGG
T ss_pred EEECCC
Confidence 999765
No 239
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.49 E-value=3.5e-13 Score=84.34 Aligned_cols=115 Identities=12% Similarity=0.121 Sum_probs=74.5
Q ss_pred CceEEeC------CeEEEcCCCCCCCeEEEEEeccCCcc---eeEEEEEEEec----CceEEeCCCcEEEecCCcEEEEE
Q psy11131 10 PRTRVLG------PILAIEGVTAEDSGTYRCSSSNIGGE---ATAEVRLQVST----PYRVDVNPPLLSVHLDGSANFQC 76 (150)
Q Consensus 10 ~~~~~~~------~~l~i~~~~~~d~G~Y~C~~~~~~~~---~~~~~~l~v~~----~~~~~~~~~~~~~~~g~~~~l~C 76 (150)
.|+.+.. .+|.|.+++.+|+|.|.|.+.+..+. ....+.|.|.. +|.+...+....+.+|+.+.|.|
T Consensus 65 ~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C 144 (215)
T 1c5d_H 65 SRLSINRDTSKSQVFLKMNSLQTEDTAIYFCTREDGWNYFDYWGPGTMVTVSSAQTTAPSVYPLAPGCGDTTSSTVTLGC 144 (215)
T ss_dssp GGEEEEEETTTTEEEEEESSCCGGGCEEEEEEECCSSSCSCCBCCCEEEEECSSCCBCCCEEEECCCSSCCCCSSEEEEE
T ss_pred CcEEEEeeCCCceEEEEECCCCcccCEEEEEEEecCCcccceEcCCEEEEecCCCCCCCeEEeccCChhhccCCcEEEEE
Confidence 5666642 38999999999999999999876321 22335778873 23333222112246789999999
Q ss_pred Eec-C-CCCCCc-EEEEeecCcccCCCc-------ce--eeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 77 EIT-P-YDSGPY-LIAWFKDGRQIPGRT-------SS--TSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 77 ~~~-~-p~~~~~-~~~w~~~~~~~~~~~-------~~--~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
.+. . | .+ .+.|.+++..+.... .. ....+.....++ |.|.|.+.|..+
T Consensus 145 ~~~g~~P---~p~~v~W~~~g~~~~~~~~~~~~~~g~~~~~s~L~~~~~~~-g~ytC~v~n~~~ 204 (215)
T 1c5d_H 145 LVKGYFP---EPVTVTWNSGALSSDVHTFPAVLQSGLYTLTSSVTSSTWPS-QTVTCNVAHPAS 204 (215)
T ss_dssp EEEEEBS---SCCEEEEGGGTTCCSCCBCCCEEETTEEEEEEEEEESSTTT-SCCEEEEEEGGG
T ss_pred EEeeeEc---CCcEEEEccCCccCceEecCcccCCCCEEEEEEEecccCCC-CeEEEEEEeCCC
Confidence 998 4 7 77 999999876542111 00 111122333345 999999999877
No 240
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.48 E-value=6e-13 Score=75.14 Aligned_cols=98 Identities=18% Similarity=0.263 Sum_probs=75.4
Q ss_pred cceeEEEEEEEecC-ceEEeCCCcEEEecCCcEEEEEEecCCCCCCcEEEEeecCcccCCCcc--------eeeEEEccC
Q psy11131 41 GEATAEVRLQVSTP-YRVDVNPPLLSVHLDGSANFQCEITPYDSGPYLIAWFKDGRQIPGRTS--------STSLVINPV 111 (150)
Q Consensus 41 ~~~~~~~~l~v~~~-~~~~~~~~~~~~~~g~~~~l~C~~~~p~~~~~~~~w~~~~~~~~~~~~--------~~~l~~~~~ 111 (150)
+.....+.|.|... +.+...+....+.+|+.+.|.|.+. + .+.+.|++++..+....+ ...|.|.++
T Consensus 5 g~~~~~~~l~V~~~pp~~~~~~~~~~v~~G~~v~l~C~~~-~---~p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v 80 (113)
T 2edh_A 5 SSGRTSAMLTVRALPIKFTEGLRNEEATEGATAVLRCELS-K---MAPVEWWKGHETLRDGDRHSLRQDGARCELQIRGL 80 (113)
T ss_dssp CCCCCCCCCCCCCSCCCEEECCCCCEECTTSCEEEEEEES-S---CCCCEEEESSSBCCCSSSEEEEEETTEEEEEECSC
T ss_pred CCCcEEEEEEEEcCCCcccccCCceEEeCCCeEEEEEEEC-C---CCcEEEEECCEECCCCCcEEEEECCCEEEEEECCC
Confidence 34455667777754 4666666777899999999999985 3 346899999887765433 247999999
Q ss_pred CCCCCceEEEEEEeCCCCceeeeEEEEEcCcCcccc
Q psy11131 112 GREDRGIYQCIARRSDGDVAQGSAELQLGGTRNIKH 147 (150)
Q Consensus 112 ~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p~~~~ 147 (150)
..+|.|.|.|.+ + .....+.|.|..+|..+.
T Consensus 81 ~~~D~G~Y~C~a----~-~~~~~~~l~V~~~p~~~~ 111 (113)
T 2edh_A 81 VAEDAGEYLCMC----G-KERTSAMLTVRAMPSGPS 111 (113)
T ss_dssp CSTTCEEEEEEE----T-TEEEEEEEEECCCCCSSC
T ss_pred ChhhCEEEEEEe----C-CCCEEEEEEEeCCCCCcc
Confidence 999999999999 4 577889999988876543
No 241
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.48 E-value=4.8e-14 Score=96.91 Aligned_cols=110 Identities=12% Similarity=0.209 Sum_probs=79.4
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEe------------------cCceE-EeCCCcEE-EecCCcEEEEE
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVS------------------TPYRV-DVNPPLLS-VHLDGSANFQC 76 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~------------------~~~~~-~~~~~~~~-~~~g~~~~l~C 76 (150)
+.|.|.++...| |.|+|.+.|..+.......+.+. .+|.+ ...+.... +.+|+.+.|.|
T Consensus 184 s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~~~L~C 262 (444)
T 1igt_B 184 SSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPRGPTIKPCPPCKCPAPNLLGGPSVFIFPPKIKDVLMISLSPIVTC 262 (444)
T ss_dssp EEEEECSTTTTT-SCCEEEEEETTTTEEEEEECCCCCCSCCCCCCCSCCCSCCCCCCEEEEECCCHHHHHCTTSCCEEEE
T ss_pred EEEEEchhhcCC-CeEEEEEEeCCCCcceEEEeccCCCCcccCCccccCCcccCCCceEEecCCchhheeecCCCcEEEE
Confidence 568999999999 99999999987765444444331 13333 22222222 47899999999
Q ss_pred Eec-C---CCCCCcEEEEeecCcccCCCcc-------------eeeEEEccCCCCCCceEEEEEEeCCCC
Q psy11131 77 EIT-P---YDSGPYLIAWFKDGRQIPGRTS-------------STSLVINPVGREDRGIYQCIARRSDGD 129 (150)
Q Consensus 77 ~~~-~---p~~~~~~~~w~~~~~~~~~~~~-------------~~~l~~~~~~~~~~g~y~C~~~~~~g~ 129 (150)
.+. . |. .+.+.|++++..+..... ...|.|..+..+|.|.|.|.+.|..+.
T Consensus 263 ~~~g~~~~p~--~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~ 330 (444)
T 1igt_B 263 VVVDVSEDDP--DVQISWFVNNVEVHTAQTQTHREDYNSTLRVVSALPIQHQDWMSGKEFKCKVNNKDLP 330 (444)
T ss_dssp EEEEECTTCC--CCEEEEEETTEECSSTTCBCCEEECSSSEEEEEEEECCHHHHHTTCEEEEEEECTTCS
T ss_pred EEeecccCCC--CeEEEEEECCccccCcccccceeCCCCcEEEEEEEEEcHHHhccCCcEEEEEEcCCCC
Confidence 998 4 41 479999999876543211 347899999999999999999998873
No 242
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=99.48 E-value=4.2e-13 Score=73.46 Aligned_cols=84 Identities=21% Similarity=0.333 Sum_probs=65.0
Q ss_pred CCCcEEEecCCcEEEEEEecCCCCCCcEEEEeecCcccCCCcc----eeeEEEccCCCCCCceEEEEEEeCCCCceeeeE
Q psy11131 60 NPPLLSVHLDGSANFQCEITPYDSGPYLIAWFKDGRQIPGRTS----STSLVINPVGREDRGIYQCIARRSDGDVAQGSA 135 (150)
Q Consensus 60 ~~~~~~~~~g~~~~l~C~~~~p~~~~~~~~w~~~~~~~~~~~~----~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~ 135 (150)
.+....+.+|+.+.|.|.+. + .|.+.|++++..+..... ...|.|.++..+|.|.|.|.+.|..| .....+
T Consensus 7 ~p~~~~v~~G~~~~l~C~~~-~---~p~v~W~k~g~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g-~~~~~~ 81 (95)
T 4hwu_A 7 QPEAYVVAPGESLELQCMLK-D---AAVISWTKDGVHLGPNNRTVLIGEYLQIKGATPRDSGLYACTAARTVD-SETWIF 81 (95)
T ss_dssp -CEEEEECTTSCEEEECCCC-T---TCEEEEEETTEEECCCSSEEEETTEEEECSCCGGGCEEEEEEEECSSC-EEEEEE
T ss_pred CCCcEEECCCCEEEEEEEeC-C---CCEEEEEECCEECCCCceEEEeCCEEEECcCCcccCEEEEEEEccCCC-cEEEEE
Confidence 34556788999999999885 4 578999999887765443 46899999999999999999999998 678889
Q ss_pred EEEEcCcCccccc
Q psy11131 136 ELQLGGTRNIKHY 148 (150)
Q Consensus 136 ~l~v~~~p~~~~~ 148 (150)
.+.|.+++..+.+
T Consensus 82 ~l~V~~~~~~~~~ 94 (95)
T 4hwu_A 82 MVNVTDAAENLYF 94 (95)
T ss_dssp EEEECCC------
T ss_pred EEEEeCCcccccc
Confidence 9999888766543
No 243
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.48 E-value=4.1e-13 Score=78.59 Aligned_cols=76 Identities=14% Similarity=0.241 Sum_probs=62.4
Q ss_pred CCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecC----------------------------cccC-CCcc--------
Q psy11131 61 PPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDG----------------------------RQIP-GRTS-------- 102 (150)
Q Consensus 61 ~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~----------------------------~~~~-~~~~-------- 102 (150)
+....+.+|+.+.|.|.+. .| .|.+.|++++ ..+. ...+
T Consensus 25 p~~~~v~~G~~v~L~C~~~G~P---~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~~~ 101 (139)
T 1gxe_A 25 PDTIVVVAGNKLRLDVPISGDP---APTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTKD 101 (139)
T ss_dssp CCEEEESSSSCCCCEEECCSBS---CCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEETT
T ss_pred CCCEEEeCCCeEEEEEEEEEcC---CCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEeCCC
Confidence 4567889999999999999 99 9999999988 3331 1111
Q ss_pred eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEc
Q psy11131 103 STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLG 140 (150)
Q Consensus 103 ~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~ 140 (150)
...|.|.++...|+|.|.|.+.|..| .....+.|.|.
T Consensus 102 ~s~L~I~~v~~~DsG~Y~C~A~N~~G-~~~~~~~L~V~ 138 (139)
T 1gxe_A 102 RSIFTVEGAEKEDEGVYTVTVKNPVG-EDQVNLTVKVI 138 (139)
T ss_dssp EEEEECSCCCTTTCEEEEEEEECSSC-EEEEEEEEEEC
T ss_pred EEEEEECCCCcccCEEEEEEEEeCCc-eEEEEEEEEEE
Confidence 24699999999999999999999999 67788888775
No 244
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.48 E-value=7.7e-13 Score=83.61 Aligned_cols=127 Identities=13% Similarity=0.202 Sum_probs=81.7
Q ss_pred CCceEEeC------CeEEEcCCCCCCCeEEEEEeccCC-----cc---eeEEEEEEEec----CceEEeCCCcEEEecCC
Q psy11131 9 GPRTRVLG------PILAIEGVTAEDSGTYRCSSSNIG-----GE---ATAEVRLQVST----PYRVDVNPPLLSVHLDG 70 (150)
Q Consensus 9 ~~~~~~~~------~~l~i~~~~~~d~G~Y~C~~~~~~-----~~---~~~~~~l~v~~----~~~~~~~~~~~~~~~g~ 70 (150)
..|+.+.. .+|.|.+++.+|+|.|.|.+.+.. +. ....+.|.|.. +|.+...+....+..|+
T Consensus 65 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~ 144 (230)
T 3n9g_H 65 QGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCARDWGSNYVWGSYPKYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGG 144 (230)
T ss_dssp TTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECCCSSSTTCCEEEECCCEEEEECSSCCBCCEEEEECCCCCCCTTC
T ss_pred CCcEEEEecCCCCEEEEEECCCChhhCEEEEEEEccCCCCcccccccccCCCEEEEEEecCCCCCEEEecCCCccccCCC
Confidence 35777653 249999999999999999987643 11 12335677752 33333222222345789
Q ss_pred cEEEEEEec--CCCCCCcEEEEeecCcccCC-----------Ccc---eeeEEEccCCCCCCceEEEEEEeCCCCceeee
Q psy11131 71 SANFQCEIT--PYDSGPYLIAWFKDGRQIPG-----------RTS---STSLVINPVGREDRGIYQCIARRSDGDVAQGS 134 (150)
Q Consensus 71 ~~~l~C~~~--~p~~~~~~~~w~~~~~~~~~-----------~~~---~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~ 134 (150)
.+.|.|.+. .|. ...+.| ++..+.. +.. .+.|.+......| |.|+|.+.+..+ .....
T Consensus 145 ~v~L~C~~~~~~P~--~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~-~~~~~ 218 (230)
T 3n9g_H 145 TAALGCLVKDYFPE--PVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPS-NTKVD 218 (230)
T ss_dssp EEEEEEEEEEEBSS--CCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEESTTBTT-BCCEEEEEEGGG-TEEEE
T ss_pred CEEEEEEEEeEECC--CEEEEE--CCcccCCCeEeCCceECCCCCEEEEEEEEECHHHcCC-CeEEEEEEECCC-CcceE
Confidence 999999998 341 467899 4433321 011 3478888888888 999999999776 34455
Q ss_pred EEEEEcC
Q psy11131 135 AELQLGG 141 (150)
Q Consensus 135 ~~l~v~~ 141 (150)
..+.+.+
T Consensus 219 ~~~~v~~ 225 (230)
T 3n9g_H 219 KRVEPKS 225 (230)
T ss_dssp EECCCCT
T ss_pred EEccCCC
Confidence 5555544
No 245
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.47 E-value=1.3e-13 Score=78.23 Aligned_cols=93 Identities=18% Similarity=0.223 Sum_probs=72.7
Q ss_pred EEEEEecCc-eEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCcc---------eeeEEEccCCCCC
Q psy11131 47 VRLQVSTPY-RVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRTS---------STSLVINPVGRED 115 (150)
Q Consensus 47 ~~l~v~~~~-~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~~---------~~~l~~~~~~~~~ 115 (150)
+.|.|..++ .+...+....+.+|+.+.|.|.+. .| .|.+.|++++..+..... ...|.|.++..+|
T Consensus 5 a~l~V~~~p~~~~~~~~~~~v~~G~~v~l~C~~~g~p---~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D 81 (115)
T 2cr6_A 5 SSGLVQGRRVHIIEDLEDVDVQEGSSATFRCRISPAN---YEPVHWFLDKTPLHANELNEIDAQPGGYHVLTLRQLALKD 81 (115)
T ss_dssp CCCCCCSSCCEEEECCCEEEEETTSCEECCCEEESTT---CCSCEEEESSCEECCSSSCCBCCBTTTBCCBEECSCCTTT
T ss_pred EEEEEcCCCCeEeccCccEEEeCCCcEEEEEEEcCCC---CCccEEEECCEECCCCCcEEEEEcCCCEEEEEEcCCChhh
Confidence 346666654 455667778899999999999999 88 889999999876654322 3479999999999
Q ss_pred CceEEEEEEeCCCCceeeeEEEEEcCcCcccc
Q psy11131 116 RGIYQCIARRSDGDVAQGSAELQLGGTRNIKH 147 (150)
Q Consensus 116 ~g~y~C~~~~~~g~~~~~~~~l~v~~~p~~~~ 147 (150)
.|.|.|. .| .....+.|.|..+|.++.
T Consensus 82 ~G~Y~C~----~g-~~~~~~~L~V~~~p~~~~ 108 (115)
T 2cr6_A 82 SGTIYFE----AG-DQRASAALRVTEKPSVFS 108 (115)
T ss_dssp CEEEEEE----ET-TEECCEEEEEECCSSCCS
T ss_pred CEEEEEE----EC-CeeEEEEEEEECCCceec
Confidence 9999999 34 466778999988876543
No 246
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.47 E-value=3.7e-13 Score=87.40 Aligned_cols=117 Identities=21% Similarity=0.320 Sum_probs=77.0
Q ss_pred CCceEEeC-----CeEEEcCCCCCCCeEEEEEeccCCc------ceeEEEEEEEec------CceEEeC-CCcEEEecCC
Q psy11131 9 GPRTRVLG-----PILAIEGVTAEDSGTYRCSSSNIGG------EATAEVRLQVST------PYRVDVN-PPLLSVHLDG 70 (150)
Q Consensus 9 ~~~~~~~~-----~~l~i~~~~~~d~G~Y~C~~~~~~~------~~~~~~~l~v~~------~~~~~~~-~~~~~~~~g~ 70 (150)
..|+.+.. .+|.|.+++.+|+|.|+|.+.+..+ .....+.|.|.. +|.+... +....+.+|+
T Consensus 87 ~~R~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~ 166 (279)
T 2wbj_D 87 KDKFLINHASLTLSTLTVTSAHPEDSSFYICSARDLTSGANNEQFFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQ 166 (279)
T ss_dssp SSSEEEEECSSSEEEEEESSCCGGGCEEEEEEEEETTCBTSCCEEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHS
T ss_pred CCcEEEEeCCCCEEEEEEccCCccCCEEEEEEEcccccCCccceeeCCCEEEEEecCCCCCCCCEEEEECCCcccccCCC
Confidence 35776653 3799999999999999999988321 112335677765 2333221 2212223688
Q ss_pred cEEEEEEec-C-CCCCC-cEEEEeecCcccCCC---------------cc----eeeEEEccCCCCC-CceEEEEEEeCC
Q psy11131 71 SANFQCEIT-P-YDSGP-YLIAWFKDGRQIPGR---------------TS----STSLVINPVGRED-RGIYQCIARRSD 127 (150)
Q Consensus 71 ~~~l~C~~~-~-p~~~~-~~~~w~~~~~~~~~~---------------~~----~~~l~~~~~~~~~-~g~y~C~~~~~~ 127 (150)
.+.|.|.+. . | . +.+.|++++..+... .. .+.|.+......| .|.|+|.+.|..
T Consensus 167 ~v~L~C~~~g~~P---~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~~~YtC~v~n~~ 243 (279)
T 2wbj_D 167 KATLVCLATGFYP---DHVELSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYG 243 (279)
T ss_dssp CCEEEEEEEEEBS---SCEEEEEEETTEECCTTEEECSSCEESSTTSTTCCEEEEEEEECCSTTTTCTTCEEEEEEEECC
T ss_pred ceEEEEEEeeEcC---CCcEEEEEECCEECCCCcccccccccccccCCCCcEEEEEEEEEChHHhccCCCEEEEEEEeCC
Confidence 999999998 4 5 4 799999988765421 11 2346666665544 667999999976
Q ss_pred C
Q psy11131 128 G 128 (150)
Q Consensus 128 g 128 (150)
.
T Consensus 244 ~ 244 (279)
T 2wbj_D 244 L 244 (279)
T ss_dssp B
T ss_pred C
Confidence 5
No 247
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.47 E-value=1.1e-13 Score=89.48 Aligned_cols=115 Identities=23% Similarity=0.281 Sum_probs=77.4
Q ss_pred ceEEeC-----CeEEEcCCCCCCCeEEEEEeccCC----cceeEEEEEEEec------CceEEe-CCCcEEEecCCcEEE
Q psy11131 11 RTRVLG-----PILAIEGVTAEDSGTYRCSSSNIG----GEATAEVRLQVST------PYRVDV-NPPLLSVHLDGSANF 74 (150)
Q Consensus 11 ~~~~~~-----~~l~i~~~~~~d~G~Y~C~~~~~~----~~~~~~~~l~v~~------~~~~~~-~~~~~~~~~g~~~~l 74 (150)
|+.+.. .+|.|.+++.+|+|.|.|.+.+.. ......+.|.|.. +|.+.. .+....+..|+.+.|
T Consensus 90 r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L 169 (270)
T 3qib_D 90 RFSAECPSNSPCSLEIQSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLEDLKNVFPPEVAVFEPSEAEISHTQKATL 169 (270)
T ss_dssp HEEEECCTTSCEEEEESSCCGGGCEEEEEEEESCTTCCCCEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEE
T ss_pred cEEEEeCCCcEEEEEECCCCHhHCeEEEEEEecCCCccceEECCcEEEEEccccccccCCceEEECCCccccccCCceEE
Confidence 555542 479999999999999999998632 1223345677765 333222 222222345899999
Q ss_pred EEEec--CCCCCCc-EEEEeecCcccCCC---------------cc----eeeEEEccCCCCC-CceEEEEEEeCCC
Q psy11131 75 QCEIT--PYDSGPY-LIAWFKDGRQIPGR---------------TS----STSLVINPVGRED-RGIYQCIARRSDG 128 (150)
Q Consensus 75 ~C~~~--~p~~~~~-~~~w~~~~~~~~~~---------------~~----~~~l~~~~~~~~~-~g~y~C~~~~~~g 128 (150)
.|.+. .| .+ .+.|++++..+... .. ...|.+.....+| .|.|+|.+.+...
T Consensus 170 ~C~~~g~~P---~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~l 243 (270)
T 3qib_D 170 VCLATGFYP---DHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGL 243 (270)
T ss_dssp EEEEEEEBS---SCEEEEEEETTEEECTTEEECSSCEESCTTSSSCCEEEEEEEEEEHHHHHSTTCEEEEEEEECCB
T ss_pred EEEecceeC---CCeEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEecCC
Confidence 99998 45 55 89999988766431 11 2456666666666 8999999998754
No 248
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.46 E-value=2.2e-14 Score=94.89 Aligned_cols=109 Identities=13% Similarity=0.142 Sum_probs=74.8
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEE----ecCceEEeCCCcEEEecCCcEEEEEEec--CCCCCC-cEEE
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQV----STPYRVDVNPPLLSVHLDGSANFQCEIT--PYDSGP-YLIA 89 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v----~~~~~~~~~~~~~~~~~g~~~~l~C~~~--~p~~~~-~~~~ 89 (150)
+.|.|.++..+|+|.|+|.+.+..+.......+.+ ..+|.+...+.......|+.+.|.|.+. .| . ..+.
T Consensus 178 ~~L~I~~~~~~D~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p---~~~~v~ 254 (323)
T 2wqr_A 178 STLPVGTRDWIEGETYQCRVTHPHLPRALMRSTTKTSGPRAAPEVYAFATPEWPGSRDKRTLACLIQNFMP---EDISVQ 254 (323)
T ss_dssp EEEECCHHHHHTTCCEEEEEECTTSSSCEEEEECCCCSCCBCCEEEEEECCCCTTCTTEEEEEEEEEEEBS---SCCEEE
T ss_pred EEEEECHHHccCCCCEEEEEECCCCCCCeeeEEEccCCCCCCCEEEEeCCChHHhcCCcEEEEEEeeeeeC---CCcEEE
Confidence 57999999999999999999987543322333321 1344433222111112389999999997 34 3 3899
Q ss_pred EeecCcccCCCc------------c---eeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 90 WFKDGRQIPGRT------------S---STSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 90 w~~~~~~~~~~~------------~---~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
|++++..+.... . .+.|.|..+..+|.|.|.|.|.|..+
T Consensus 255 W~k~g~~l~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~ 308 (323)
T 2wqr_A 255 WLHNEVQLPDARHSTTQPRKTKGSGFFVFSRLEVTRAEWEQKDEFICRAVHEAA 308 (323)
T ss_dssp EEETTEECCGGGEEECCCEECSSSSEEEEEEEEEEHHHHHHCCCEEEEEECTTS
T ss_pred EEECCEECCCCceeecCcccCCCCcEEEEEEEEEChHHccCCCEEEEEEEeCCC
Confidence 999988764321 0 24688888888899999999999876
No 249
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.46 E-value=3.1e-15 Score=85.81 Aligned_cols=96 Identities=22% Similarity=0.268 Sum_probs=75.6
Q ss_pred eeEEEEEEEecCceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcE-EEEeecCcccCCC--cc------------eeeE
Q psy11131 43 ATAEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYL-IAWFKDGRQIPGR--TS------------STSL 106 (150)
Q Consensus 43 ~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~-~~w~~~~~~~~~~--~~------------~~~l 106 (150)
....+.|.|..+|.+.. +....+.+|+.+.|.|.+. .| .|. +.|++++..+... .+ ...|
T Consensus 3 ~~~~~~l~V~~~P~i~~-~~~~~~~~G~~v~l~C~~~g~P---~p~~i~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L 78 (122)
T 2cry_A 3 SGSSGTLTVNGPPIISS-TQTQHALHGEKGQIKCFIRSTP---PPDRIAWSWKENVLESGTSGRYTVETISTEEGVISTL 78 (122)
T ss_dssp SSCCCCCCCCSSCCEEE-ECCCCCCTTSCCCCCEEECCSS---CCSEEEEESSSCEECSEEETTEEEEEEEETTEEEEEE
T ss_pred cceEEEEEEecCCCccC-CCeEEEecCCCEEEEEEEeecC---CCcEeEEEECCEEccCCCCCCEEEEEecCCCceEEEE
Confidence 34456778888887766 6667788999999999999 88 775 9999988766531 11 2379
Q ss_pred EEccCCCCCC-ceEEEEEEeCCCCceeeeEEEEEcCcC
Q psy11131 107 VINPVGREDR-GIYQCIARRSDGDVAQGSAELQLGGTR 143 (150)
Q Consensus 107 ~~~~~~~~~~-g~y~C~~~~~~g~~~~~~~~l~v~~~p 143 (150)
.|.++..+|. |.|.|.+.|..| .....+.|.|.+++
T Consensus 79 ~I~~v~~~D~~G~Y~C~a~N~~G-~~~~~~~l~V~~~~ 115 (122)
T 2cry_A 79 TISNIVRADFQTIYNCTAWNSFG-SDTEIIRLKEQGSE 115 (122)
T ss_dssp ECTTCCHHHHHSCEEEEEECSSC-EEEEEECCCCSCSS
T ss_pred EEcCCChhhCCceEEEEEECCCC-eEEEEEEEEECCCC
Confidence 9999999998 999999999999 57777888777654
No 250
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.46 E-value=8.5e-13 Score=75.68 Aligned_cols=81 Identities=17% Similarity=0.232 Sum_probs=64.4
Q ss_pred EEeCCCcEEEecCCcEEEEEEec-C---CCCCCcEEEEeecCc---------ccCCC---cc-----eeeEEEccCCCCC
Q psy11131 57 VDVNPPLLSVHLDGSANFQCEIT-P---YDSGPYLIAWFKDGR---------QIPGR---TS-----STSLVINPVGRED 115 (150)
Q Consensus 57 ~~~~~~~~~~~~g~~~~l~C~~~-~---p~~~~~~~~w~~~~~---------~~~~~---~~-----~~~l~~~~~~~~~ 115 (150)
+...|....+.+|+.+.|.|.+. . | .|.+.|+++.. .+... .. ...|.|.++...|
T Consensus 10 F~~~P~~v~V~eG~~v~L~C~v~g~~~~p---~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 86 (126)
T 2dav_A 10 FIEKPQGGTVKVGEDITFIAKVKAEDLLR---KPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNF 86 (126)
T ss_dssp CCSCCCCCEEETTCCEEEEEEEECCCSSS---CCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTS
T ss_pred EEEcCCCeEEeCCCCEEEEEEEeccCCCC---CCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCccc
Confidence 44556778899999999999986 4 7 89999999631 11100 00 3679999999999
Q ss_pred CceEEEEEEeCCCCceeeeEEEEEcC
Q psy11131 116 RGIYQCIARRSDGDVAQGSAELQLGG 141 (150)
Q Consensus 116 ~g~y~C~~~~~~g~~~~~~~~l~v~~ 141 (150)
+|.|.|.+.|..| ..+.++.|.|..
T Consensus 87 aG~Y~Cevsn~~g-~~~~~~~L~V~~ 111 (126)
T 2dav_A 87 AGNYRCEVTYKDK-FDSCSFDLEVHE 111 (126)
T ss_dssp CEEEEEEEECSSC-EEEECCEEEEEC
T ss_pred CEEEEEEEEeCCC-cEEEEEEEEEEe
Confidence 9999999999988 688899999988
No 251
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.46 E-value=6.9e-13 Score=73.77 Aligned_cols=74 Identities=15% Similarity=0.191 Sum_probs=62.1
Q ss_pred ecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCcc-------------eeeEEEccCCCCCCceEEEEEEeCCCCcee
Q psy11131 67 HLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRTS-------------STSLVINPVGREDRGIYQCIARRSDGDVAQ 132 (150)
Q Consensus 67 ~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~~-------------~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~ 132 (150)
..+..+.+.|.+. .| .|.+.|++++..+..... ...|.|.++..+|.|.|.|.+.|..| ...
T Consensus 14 ~~~~~~~~~c~v~G~P---~P~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G-~~~ 89 (103)
T 1wwb_X 14 TSDHHWCIPFTVKGNP---KPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYG-KDE 89 (103)
T ss_dssp CCCCEEEEEEEEECSS---CCEEEEEETTEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEECSSC-EEE
T ss_pred eECcEEEEEEEEEEeC---CCEEEEEECCEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEEEEEEEEeCCC-cEe
Confidence 3567789999999 99 999999999887654432 23499999999999999999999999 688
Q ss_pred eeEEEEEcCcCc
Q psy11131 133 GSAELQLGGTRN 144 (150)
Q Consensus 133 ~~~~l~v~~~p~ 144 (150)
.++.|.|.++|-
T Consensus 90 ~~~~l~V~~~P~ 101 (103)
T 1wwb_X 90 KQISAHFMGWPG 101 (103)
T ss_dssp EEEEECCSCCCC
T ss_pred EEEEEEECCCCC
Confidence 889998887764
No 252
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.46 E-value=1.7e-13 Score=87.15 Aligned_cols=116 Identities=18% Similarity=0.186 Sum_probs=74.8
Q ss_pred CceEEeC------CeEEEcCCCCCCCeEEEEEeccCCc-------------ceeEEEEEEEec----CceEEeCCCcEEE
Q psy11131 10 PRTRVLG------PILAIEGVTAEDSGTYRCSSSNIGG-------------EATAEVRLQVST----PYRVDVNPPLLSV 66 (150)
Q Consensus 10 ~~~~~~~------~~l~i~~~~~~d~G~Y~C~~~~~~~-------------~~~~~~~l~v~~----~~~~~~~~~~~~~ 66 (150)
.|+.+.. .+|.|.+++.+|+|.|.|.+.+..+ .......|.|.. +|.+...+....+
T Consensus 73 ~R~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~w~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~ 152 (239)
T 3tv3_H 73 SRLTLALDTPKNLVFLKLNSVTAADTATYYCARFGGEVLRYTDWPKPAWVDLWGRGTLVTVSSASTKGPSVFPLAPSSKS 152 (239)
T ss_dssp GGEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEEECSSCSSSCEEEEEEEECCCEEEEECCCCCBCCEEEEECCCCCC
T ss_pred CCEEEEEECCCCEEEEEECCCChhhCEEEEEEEecCccccccccccccceeeeCCCcEEeeccCCCcCCEEEEECCChhh
Confidence 5666643 3599999999999999999875421 112234566652 2333322222234
Q ss_pred ecCCcEEEEEEec--CCCCCCcEEEEeecCcccCC---------Ccc---eeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 67 HLDGSANFQCEIT--PYDSGPYLIAWFKDGRQIPG---------RTS---STSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 67 ~~g~~~~l~C~~~--~p~~~~~~~~w~~~~~~~~~---------~~~---~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
..|+.+.|.|.+. .|. ...+.|.+++..+.. ... .+.|.+......| |.|.|.+.+..+
T Consensus 153 ~~g~~v~l~C~~~~~~p~--~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~ 225 (239)
T 3tv3_H 153 TSGGTAALGCLVKDYFPE--PVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPS 225 (239)
T ss_dssp --TTEEEEEEEEEEEBSS--CCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGG
T ss_pred ccCCcEEEEEEEeeEeCC--CeEEEEEECCccCceEecCceECCCCCEEEEEEEEEchhhcCC-CEEEEEEEECCC
Confidence 4689999999998 441 346899988753211 111 3567788877778 999999998765
No 253
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.46 E-value=3.7e-13 Score=76.60 Aligned_cols=91 Identities=19% Similarity=0.194 Sum_probs=67.2
Q ss_pred EEEEecCceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCcc------------eeeEEEccCCCC
Q psy11131 48 RLQVSTPYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRTS------------STSLVINPVGRE 114 (150)
Q Consensus 48 ~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~~------------~~~l~~~~~~~~ 114 (150)
.|.|..+|.+...... .......|.|.+. .| .+.+.|++++..+..... ...|.|.++...
T Consensus 2 ~L~V~~pP~i~~~~~~---~~~~~~~l~C~~~g~P---~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~L~i~~~~~~ 75 (118)
T 1wwc_A 2 ALTVYYPPRVVSLEEP---ELRLEHCIEFVVRGNP---PPTLHWLHNGQPLRESKIIHVEYYQEGEISEGCLLFNKPTHY 75 (118)
T ss_dssp --CCCCCCCCCCCCCC---CCCCEEEEEEEEECSS---CCEEEEEETTEECCCSSSEEEEEEECSSEEEEEEEEESCCGG
T ss_pred EEEEecCCceeccCCC---eeccceEEEEEeeeeC---CCeEEEEECCEECCCCCceeEEEeccCccccEEEEECCCChh
Confidence 4566666654333221 1225567889999 99 999999999987765442 347999999999
Q ss_pred CCceEEEEEEeCCCCceeeeEEEEEcCcCcc
Q psy11131 115 DRGIYQCIARRSDGDVAQGSAELQLGGTRNI 145 (150)
Q Consensus 115 ~~g~y~C~~~~~~g~~~~~~~~l~v~~~p~~ 145 (150)
|.|.|.|.+.|..| ....++.+.|...|-.
T Consensus 76 d~G~Y~C~a~N~~G-~~~~~~~l~v~~~P~~ 105 (118)
T 1wwc_A 76 NNGNYTLIAKNPLG-TANQTINGHFLKEPFP 105 (118)
T ss_dssp GCEEEEEEEEETTE-EEEEEEEECCSCCCCC
T ss_pred cCEEEEEEEECCCC-eEeeEEEEEEccCCCc
Confidence 99999999999999 6788888888776644
No 254
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.45 E-value=9.8e-13 Score=72.02 Aligned_cols=79 Identities=20% Similarity=0.397 Sum_probs=63.2
Q ss_pred eEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCcc----eeeEEEccCCCCCCceEEEEEEeCCCCc
Q psy11131 56 RVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRTS----STSLVINPVGREDRGIYQCIARRSDGDV 130 (150)
Q Consensus 56 ~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~~----~~~l~~~~~~~~~~g~y~C~~~~~~g~~ 130 (150)
.+...+....+.+|+.+.|.|.+. .| +.+.|++++..+....+ ...|.|.++...|.|.|.|.+.|..| .
T Consensus 11 ~~~~~~~~~~v~~G~~v~l~C~~~g~p----p~i~W~k~g~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g-~ 85 (95)
T 2ckn_A 11 GVPVEVESLLVHPGDLLQLRCRLRDDV----QSINWLRDGVQLVESNRTRITGEEVEVRDSIPADSGLYACVTSSPSG-S 85 (95)
T ss_dssp CBTTBBCCEEECTTSCEEEECCEESSC----CEEEEEBTTBCCCCCSSEEECSSEEEESSCCGGGSEEEEEEEEETTE-E
T ss_pred EEEcCcceEEEcCCCeEEEEEECCCCC----CceEEEECCEecCCCCCEEEeCCEEEECCCChHHCEEEEEEeccCCC-c
Confidence 344445667889999999999998 54 58999999887754433 46899999999999999999999988 5
Q ss_pred eeeeEEEEE
Q psy11131 131 AQGSAELQL 139 (150)
Q Consensus 131 ~~~~~~l~v 139 (150)
....+.|.|
T Consensus 86 ~~~~~~l~V 94 (95)
T 2ckn_A 86 DTTYFSVNV 94 (95)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEEE
Confidence 667777665
No 255
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.45 E-value=1.7e-12 Score=72.74 Aligned_cols=81 Identities=19% Similarity=0.223 Sum_probs=62.7
Q ss_pred eEEeCCCcEEEecCCcEEEEEEec-CCCCCC---cEEEEeecCcccCC---Cc--------------ceeeEEEccCCCC
Q psy11131 56 RVDVNPPLLSVHLDGSANFQCEIT-PYDSGP---YLIAWFKDGRQIPG---RT--------------SSTSLVINPVGRE 114 (150)
Q Consensus 56 ~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~---~~~~w~~~~~~~~~---~~--------------~~~~l~~~~~~~~ 114 (150)
.+...|....+.+|+.+.|.|.+. .| . +.+.|++++..... .. ....|.|.++...
T Consensus 6 ~f~~~p~~~~v~~G~~v~L~C~~~g~p---~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 82 (108)
T 3cx2_A 6 LFVMRPQDGEVTVGGSITFSARVAGAS---LLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPA 82 (108)
T ss_dssp SCSBCCCCEEEETTCCEEEEEEEECC----CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGG
T ss_pred EEEeCCCcEEEeCCCCEEEEEEECCCc---cCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCCc
Confidence 444566778899999999999998 87 6 99999986521100 00 0357999999999
Q ss_pred CCceEEEEEEeCCCCceeeeEEEEEc
Q psy11131 115 DRGIYQCIARRSDGDVAQGSAELQLG 140 (150)
Q Consensus 115 ~~g~y~C~~~~~~g~~~~~~~~l~v~ 140 (150)
|+|.|.|.+.|..| ..+..+.|.|.
T Consensus 83 D~G~Y~C~a~N~~G-~~~~~~~L~V~ 107 (108)
T 3cx2_A 83 FTGSYRCEVSTKDK-FDCSNFNLTVH 107 (108)
T ss_dssp GCEEEEEEEECSSC-EEEEEEEEEEE
T ss_pred cCEEEEEEEecCCC-ceEEEEEEEEe
Confidence 99999999999999 67788888775
No 256
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.45 E-value=8.4e-13 Score=75.64 Aligned_cols=74 Identities=14% Similarity=0.088 Sum_probs=62.4
Q ss_pred cCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCcc---------------eeeEEEccCCCCCCceEEEEEEeCCCCce
Q psy11131 68 LDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRTS---------------STSLVINPVGREDRGIYQCIARRSDGDVA 131 (150)
Q Consensus 68 ~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~~---------------~~~l~~~~~~~~~~g~y~C~~~~~~g~~~ 131 (150)
.+..+.|.|.+. .| .|.+.|+++|..+..... ...|.|..+...|.|.|+|.|.|..| ..
T Consensus 14 ~~~~~~l~c~v~G~P---~P~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G-~~ 89 (126)
T 1he7_A 14 EMHHWCIPFSVDGQP---APSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFG-QA 89 (126)
T ss_dssp CCCEEEEEEEECCSS---CCEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTE-EE
T ss_pred cCccEEEEEEEeeeC---CCeEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCC-eE
Confidence 567789999999 99 999999999988764322 25799999999999999999999999 68
Q ss_pred eeeEEEEEcCcCcc
Q psy11131 132 QGSAELQLGGTRNI 145 (150)
Q Consensus 132 ~~~~~l~v~~~p~~ 145 (150)
..++.+.|.+.|-.
T Consensus 90 ~~t~~l~v~~~P~~ 103 (126)
T 1he7_A 90 SASIMAAFMDNPFE 103 (126)
T ss_dssp EEEEEECCCSCTTS
T ss_pred EEEEEEEEEcCCCC
Confidence 88888888877644
No 257
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.45 E-value=8.2e-13 Score=72.90 Aligned_cols=74 Identities=22% Similarity=0.441 Sum_probs=61.0
Q ss_pred CcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCcc---------eeeEEEccCCCCCCceEEEEEEeCCCCce
Q psy11131 62 PLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRTS---------STSLVINPVGREDRGIYQCIARRSDGDVA 131 (150)
Q Consensus 62 ~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~~---------~~~l~~~~~~~~~~g~y~C~~~~~~g~~~ 131 (150)
....+.+|+.+.|.|.+. .| .+.+.|++++..+..... ...|.|.++..+|.|.|.|.+.|..| ..
T Consensus 16 ~~~~v~~G~~v~l~C~~~g~p---~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g-~~ 91 (100)
T 3caf_A 16 RLHAVPAANTVKFRCPAGGNP---MPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYG-SI 91 (100)
T ss_dssp CEEEECTTCCEEEECCEEEES---CCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTE-EE
T ss_pred cEEEecCCCEEEEEEEccccC---CCEEEEEECCEEcccccccccEEEecCeEEEEEccCCcCCCEEEEEEEEeCCC-EE
Confidence 356788999999999999 88 899999999876653321 34799999999999999999999998 56
Q ss_pred eeeEEEEE
Q psy11131 132 QGSAELQL 139 (150)
Q Consensus 132 ~~~~~l~v 139 (150)
...+.|.|
T Consensus 92 ~~~~~l~V 99 (100)
T 3caf_A 92 NHTYHLDV 99 (100)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 67777765
No 258
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.45 E-value=1.7e-14 Score=90.56 Aligned_cols=109 Identities=15% Similarity=0.221 Sum_probs=70.6
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEE----EEecCceEEeCCCcEEEecCCcEEEEEEec--CCCCCCc-EEE
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRL----QVSTPYRVDVNPPLLSVHLDGSANFQCEIT--PYDSGPY-LIA 89 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l----~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~--~p~~~~~-~~~ 89 (150)
+.|.|.++..+|+|.|+|.+.+..+.......+ .+..+|.+...+.......|+.+.|.|.+. .| .+ .+.
T Consensus 76 ~~L~I~~~~~~D~g~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P---~~~~v~ 152 (218)
T 2rgs_A 76 STLPIQHQDWMSGKEFKCKVNNKDLPSPIERTISKIKGLVRAPQVYILPPPAEQLSRKDVSLTCLVVGFNP---GDISVE 152 (218)
T ss_dssp EEEECCHHHHHTTCCEEEEEEETTCSSCEEEEECCCCCCCBCCEEEEECCCGGGTTSSEEEEEEEEEEEBS---SCCEEE
T ss_pred EEEEEcHHHcCCCCeEEEEEECCcCCCcceEEEeecCCCCCCCEEEEECCChHHhcCCceEEEEEEEeeeC---CCcEEE
Confidence 579999999999999999999875543122222 233455544333221113588999999998 45 54 999
Q ss_pred EeecCcccCCCc-------c------eeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 90 WFKDGRQIPGRT-------S------STSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 90 w~~~~~~~~~~~-------~------~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
|++++..+.... . ...|.+......|.|.|.|.+.|...
T Consensus 153 W~k~g~~~~~~~~~~~~~~~~gt~~~~s~l~v~~~~~~d~g~YtC~a~n~~l 204 (218)
T 2rgs_A 153 WTSNGHTEENYKDTAPVLDSDGSYFIYSKLNMKTSKWEKTDSFSCNVRHEGL 204 (218)
T ss_dssp EEETTEEECCEEECCCEECTTSCEEEEEEEEEEHHHHHHCSCEEEEEECTTS
T ss_pred EEECCEeccCceecccEECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCC
Confidence 999987653211 0 12233433333458999999999765
No 259
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.44 E-value=3e-12 Score=70.39 Aligned_cols=76 Identities=22% Similarity=0.339 Sum_probs=61.0
Q ss_pred CCcEEEecCCcEEEEEEec--CCCCCCcEEEEeecCcccCCCcc---eeeEEEccCCCCCCceEEEEEEeCCCCceeeeE
Q psy11131 61 PPLLSVHLDGSANFQCEIT--PYDSGPYLIAWFKDGRQIPGRTS---STSLVINPVGREDRGIYQCIARRSDGDVAQGSA 135 (150)
Q Consensus 61 ~~~~~~~~g~~~~l~C~~~--~p~~~~~~~~w~~~~~~~~~~~~---~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~ 135 (150)
+....+.+|+.+.|.|.+. .| .+.+.|++++........ ...|.|.++..+|.|.|.|.+.|..| .....+
T Consensus 17 ~~~~~v~~G~~v~l~C~~~~~~p---~~~v~W~k~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g-~~~~~~ 92 (98)
T 1gl4_B 17 QRSQSVRPGADVTFICTAKSKSP---AYTLVWTRLHNGKLPSRAMDFNGILTIRNVQPSDAGTYVCTGSNMFA-MDQGTA 92 (98)
T ss_dssp CCEEEECTTCCEEEEEEEEESSS---CCEEEEEEGGGBCCCTTEEEETTEEEECSCCGGGCEEEEEEEECSSC-EEEEEE
T ss_pred CCCeEEecCCCEEEEEeCCCCCC---CcEEEEEeCCCCCCCceeecCCCEEEEeCCChhhCEEEEEEecCCCC-ccccEE
Confidence 4556788999999999997 67 889999987543322221 56899999999999999999999998 577777
Q ss_pred EEEEc
Q psy11131 136 ELQLG 140 (150)
Q Consensus 136 ~l~v~ 140 (150)
.|.|.
T Consensus 93 ~l~V~ 97 (98)
T 1gl4_B 93 TLHVQ 97 (98)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 77775
No 260
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.44 E-value=2.3e-13 Score=74.67 Aligned_cols=82 Identities=26% Similarity=0.491 Sum_probs=65.0
Q ss_pred eEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCcceeeEEEccCCCCCCceEEEEEEeCCC-Cceee
Q psy11131 56 RVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDG-DVAQG 133 (150)
Q Consensus 56 ~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~g~y~C~~~~~~g-~~~~~ 133 (150)
.+...+....+.+|+.+.|.|.+. .| .+.+.|++++..+.... ...|.|.++..+|.|.|.|.+.|..+ ...+.
T Consensus 12 ~i~~~p~~~~v~~G~~v~l~C~~~g~p---~~~v~W~k~~~~~~~~~-~~~L~i~~v~~~d~G~Y~C~a~n~~~~~~~s~ 87 (96)
T 2ens_A 12 QLVVEPEGGAVAPGGTVTLTCEVPAQP---SPQIHWMKDGVPLPLPP-SPVLILPEIGPQDQGTYSCVATHSSHGPQESR 87 (96)
T ss_dssp CCEEESTTSEECTTCEEEEECCCSSCS---SCCCCCEESSSBCSSCC-CSEEEEESCCTTTCEEEECEECCSSCCCEECC
T ss_pred EEEECCCCCEEcCCCeEEEEEEEccCC---CCEEEEEECCEECcCCC-CCEEEECCCCcccCEEEEEEEEeCCCCcEEEE
Confidence 344455556788999999999999 88 88999999988775443 57899999999999999999999644 34566
Q ss_pred eEEEEEcC
Q psy11131 134 SAELQLGG 141 (150)
Q Consensus 134 ~~~l~v~~ 141 (150)
.+.+.|.+
T Consensus 88 ~~~v~V~~ 95 (96)
T 2ens_A 88 AVSISIIE 95 (96)
T ss_dssp CEEEEECC
T ss_pred EEEEEEeC
Confidence 67777654
No 261
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.44 E-value=2.2e-12 Score=70.44 Aligned_cols=79 Identities=15% Similarity=0.193 Sum_probs=61.6
Q ss_pred ceEEeCCCcEEEecCCcEEEEEEecCCCCCCcEEEEeecCcccCCCcc--------eeeEEEccCCCCCCceEEEEEEeC
Q psy11131 55 YRVDVNPPLLSVHLDGSANFQCEITPYDSGPYLIAWFKDGRQIPGRTS--------STSLVINPVGREDRGIYQCIARRS 126 (150)
Q Consensus 55 ~~~~~~~~~~~~~~g~~~~l~C~~~~p~~~~~~~~w~~~~~~~~~~~~--------~~~l~~~~~~~~~~g~y~C~~~~~ 126 (150)
+.+...+....+.+|+.+.|.|.+..+ .+.+.|++++..+....+ ...|.|.++..+|.|.|.|.+.|
T Consensus 6 ~~~~~~~~~~~v~~G~~v~l~C~v~~~---~~~v~W~k~g~~i~~~~~~~i~~~g~~~~L~I~~v~~~D~G~Y~C~a~n- 81 (93)
T 1waa_A 6 IEVEKPLYGVEVFVGETAHFEIELSEP---DVHGQWKLKGQPLAASPDCEIIEDGKKHILILHNCQLGMTGEVSFQAAN- 81 (93)
T ss_dssp CCEEECCCCEEEETTSCEEEEEEESSS---SCCCEEEETTEECCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEETT-
T ss_pred cEeeccCcceEEeCCCCEEEEEEECCC---CCeEEEEECCEECcCCCCEEEEEECCEEEEEECCCChhhCEEEEEEECC-
Confidence 445556677889999999999999844 567999999988765443 24799999999999999999875
Q ss_pred CCCceeeeEEEEEcC
Q psy11131 127 DGDVAQGSAELQLGG 141 (150)
Q Consensus 127 ~g~~~~~~~~l~v~~ 141 (150)
...++.|.|.+
T Consensus 82 ----~~~sa~L~V~~ 92 (93)
T 1waa_A 82 ----TKSAANLKVKE 92 (93)
T ss_dssp ----EEEEEEEEEEC
T ss_pred ----CcEEEEEEEEc
Confidence 34566666654
No 262
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.43 E-value=1.4e-12 Score=90.45 Aligned_cols=110 Identities=13% Similarity=0.268 Sum_probs=78.3
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEE---ecCceEEeCCCc-EEEecCCcEEEEEEec-C-CCCCCcEEEE
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQV---STPYRVDVNPPL-LSVHLDGSANFQCEIT-P-YDSGPYLIAW 90 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v---~~~~~~~~~~~~-~~~~~g~~~~l~C~~~-~-p~~~~~~~~w 90 (150)
+.|.|.++..+|.|.|+|.+.|..+.......|.+ ..+|.+...+.. ..+.+|+.+.|.|.+. . |. .+.+.|
T Consensus 309 ~~L~I~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~P~v~~~~~~~~~v~~g~~~~L~C~~~g~~P~--~~~v~W 386 (475)
T 1iga_A 309 SVLPGCAEPWNHGKTFTCTAAYPESKTPLTATLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPK--DVLVRW 386 (475)
T ss_pred EEEEEchHHhccCCcEEEEEEcCCCCCceEEEeecCCCCCCCeEEEECCChHHhccCCceEEEEEEeeeECC--CCEEEE
Confidence 57999999999999999999998776544445532 455555443332 2356788999999998 4 31 359999
Q ss_pred eecCcccCCCc------------c------eeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 91 FKDGRQIPGRT------------S------STSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 91 ~~~~~~~~~~~------------~------~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
++++..+.... . .+.|.+.....+|.|.|.|.|.|...
T Consensus 387 ~k~g~~l~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~~~g~YtC~a~n~~l 442 (475)
T 1iga_A 387 LQGSQELPREKYLTWASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEAL 442 (475)
T ss_pred EECCEECCCCceeecccccccCCCCCcEEEEEEEEEChHHhcCCCEEEEEEEcCCC
Confidence 99987654321 1 23456666666788999999998764
No 263
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.43 E-value=1e-12 Score=73.33 Aligned_cols=85 Identities=18% Similarity=0.210 Sum_probs=64.9
Q ss_pred CceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCc-ccC-------CCcc---------eeeEEEccCCCCC
Q psy11131 54 PYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGR-QIP-------GRTS---------STSLVINPVGRED 115 (150)
Q Consensus 54 ~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~-~~~-------~~~~---------~~~l~~~~~~~~~ 115 (150)
.|.+...+....+.+|+.+.|.|.+. .| .+.+.|++++. .+. ...+ ...|.|.++..+|
T Consensus 6 ~p~~~~~~~~~~v~~G~~v~L~C~~~~~~---~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D 82 (108)
T 3m45_A 6 SQGQFPLTQNVTVVEGGTAILTCRVDQND---NTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSD 82 (108)
T ss_dssp --CCCEECCCEEEETTSCEEEEEEESSCS---SCCEEEECTTCCEEEETTEECSCCTTEEEEEESSSEEEEEECSCCGGG
T ss_pred CCCccccCCeeEEEeCCcEEEEeEEcCCC---ccEEEEEcCCCceEEEcCCcccccCcEEEeecCCCcEEEEECCCChhH
Confidence 34444556678899999999999999 88 88999988654 110 0001 4579999999999
Q ss_pred CceEEEEEEeCCCCceeeeEEEEEcCcC
Q psy11131 116 RGIYQCIARRSDGDVAQGSAELQLGGTR 143 (150)
Q Consensus 116 ~g~y~C~~~~~~g~~~~~~~~l~v~~~p 143 (150)
.|.|.|.+.| .+ ..+..+.|.|.++|
T Consensus 83 ~G~Y~C~~~n-~~-~~~~~~~L~V~~~P 108 (108)
T 3m45_A 83 EGQYTCSLFT-MP-VKTSKAYLTVLGVP 108 (108)
T ss_dssp CEEEEEEECS-SS-CEEEEEEEEEECCC
T ss_pred CeEEEEEEEc-CC-CcEEEEEEEEEcCC
Confidence 9999999999 66 67888889888765
No 264
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.43 E-value=1.4e-12 Score=72.38 Aligned_cols=85 Identities=20% Similarity=0.293 Sum_probs=67.2
Q ss_pred CceEEeCCCcEEEecCCcEEEEEEecCCCCCCcEEEEeecCcccCCCcc--------eeeEEEccCCCCCCceEEEEEEe
Q psy11131 54 PYRVDVNPPLLSVHLDGSANFQCEITPYDSGPYLIAWFKDGRQIPGRTS--------STSLVINPVGREDRGIYQCIARR 125 (150)
Q Consensus 54 ~~~~~~~~~~~~~~~g~~~~l~C~~~~p~~~~~~~~w~~~~~~~~~~~~--------~~~l~~~~~~~~~~g~y~C~~~~ 125 (150)
++.+...+....+.+|+.+.|.|.+..| .+.+.|++++..+..... ...|.|.++..+|.|.|.|.+.|
T Consensus 8 pp~~~~~~~~~~v~~G~~v~l~C~~~~~---~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 84 (103)
T 2edf_A 8 PAAIIKPLEDQWVAPGEDVELRCELSRA---GTPVHWLKDRKAIRKSQKYDVVCEGTMAMLVIRGASLKDAGEYTCEVEA 84 (103)
T ss_dssp CCCEEECCCCEEECTTSCEEECCEESSS---SCCCCEEESSCBCCCSSSEEEEEETTEEEEEESSCCTTTCSEEEEECSS
T ss_pred CcEEEecCCccEEcCCCCEEEEEEEeCC---CCcEEEEECCEEccCCCCEEEEECCCEEEEEECCCCcccCEEEEEEEcc
Confidence 3445556667888999999999998855 677999999887754433 34699999999999999999987
Q ss_pred CCCCceeeeEEEEEcCcCccc
Q psy11131 126 SDGDVAQGSAELQLGGTRNIK 146 (150)
Q Consensus 126 ~~g~~~~~~~~l~v~~~p~~~ 146 (150)
....+.|.|..+|..+
T Consensus 85 -----~~~~~~l~V~~~p~~~ 100 (103)
T 2edf_A 85 -----SKSTASLHVEEKASGP 100 (103)
T ss_dssp -----CEEEEEEEECCCSSSS
T ss_pred -----CCcEEEEEEeCCCCCC
Confidence 3677888888877654
No 265
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.43 E-value=8.4e-13 Score=70.70 Aligned_cols=72 Identities=15% Similarity=0.254 Sum_probs=57.6
Q ss_pred cEEEecCCcEEEEEEecCCCCCCcEEEEeecCcccCCCcc--------eeeEEEccCCCCCCceEEEEEEeCCCCceeee
Q psy11131 63 LLSVHLDGSANFQCEITPYDSGPYLIAWFKDGRQIPGRTS--------STSLVINPVGREDRGIYQCIARRSDGDVAQGS 134 (150)
Q Consensus 63 ~~~~~~g~~~~l~C~~~~p~~~~~~~~w~~~~~~~~~~~~--------~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~ 134 (150)
.+.+.+|+.+.|.|.+..| .|.+.|++++..+..... ...|.|.++..+|.|.|.|.+. ..+.+
T Consensus 5 ~v~~~~G~~v~l~C~vs~p---~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~-----n~~~~ 76 (84)
T 2lu7_A 5 RVRSTPGGDLELVVHLSGP---GGPVRWYKDGERLASQGRVQLEQAGARQVLRVQGARSGDAGEYLCDAP-----QDSRI 76 (84)
T ss_dssp CEEECTTSCEEEECCCSCC---STTCEEEETTEECCCCSSEEEEECSSCEEEEESSCSSTTCEEEEEECT-----TTCEE
T ss_pred EEEEecCCCEEEEEEECCC---CcEEEEEECCEEccccccEEEeecCCeEEEEecCCCCcccEEEEEEEC-----CEEEE
Confidence 4667899999999987766 678999999998865543 3579999999999999999863 34566
Q ss_pred EEEEEcCc
Q psy11131 135 AELQLGGT 142 (150)
Q Consensus 135 ~~l~v~~~ 142 (150)
+.|.|..|
T Consensus 77 a~l~V~eP 84 (84)
T 2lu7_A 77 FLVSVEEP 84 (84)
T ss_dssp EEEEECCC
T ss_pred EEEEEECC
Confidence 77777654
No 266
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=99.43 E-value=2.5e-12 Score=82.52 Aligned_cols=126 Identities=15% Similarity=0.212 Sum_probs=77.7
Q ss_pred CCceEEeC------CeEEEcCCCCCCCeEEEEEeccCCc-----------ceeEEEEEEEec----CceEEeCCCcEEEe
Q psy11131 9 GPRTRVLG------PILAIEGVTAEDSGTYRCSSSNIGG-----------EATAEVRLQVST----PYRVDVNPPLLSVH 67 (150)
Q Consensus 9 ~~~~~~~~------~~l~i~~~~~~d~G~Y~C~~~~~~~-----------~~~~~~~l~v~~----~~~~~~~~~~~~~~ 67 (150)
.+|+.+.. .+|.|.+++.+|+|.|.|.+.+..+ .....+.|.|.. +|.+...+....+.
T Consensus 88 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~ 167 (256)
T 3sob_H 88 KGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARGSGHVNAVKNYGYVMDYWGQGTLVTVSSASTKGPSVFPLAPSSKST 167 (256)
T ss_dssp TTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEESSCTTCSSCCTTSEEEECCCEEEEECSSCCBCCEEEEECCC----
T ss_pred CCcEEEEEeCCCCEEEEEECCCCcccCEEEEEEEecCCCccccccccceeEECCCEEEEEecCCCCCCEEEEECCCcccc
Confidence 35777653 2499999999999999999876421 122334677752 23333222223456
Q ss_pred cCCcEEEEEEec--CCCCCCcEEEEeecCcccCCC-----------cc---eeeEEEccCCCCCCceEEEEEEeCCCCce
Q psy11131 68 LDGSANFQCEIT--PYDSGPYLIAWFKDGRQIPGR-----------TS---STSLVINPVGREDRGIYQCIARRSDGDVA 131 (150)
Q Consensus 68 ~g~~~~l~C~~~--~p~~~~~~~~w~~~~~~~~~~-----------~~---~~~l~~~~~~~~~~g~y~C~~~~~~g~~~ 131 (150)
+|+.+.|.|.+. .|. ...+.| ++..+... .. .+.|.+.....+| |.|+|.+.+..+ ..
T Consensus 168 ~g~~v~L~C~~~~~~p~--~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-~~ytC~v~~~~~-~~ 241 (256)
T 3sob_H 168 SGGTAALGCLVKDYFPE--PVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPS-NT 241 (256)
T ss_dssp -TTEEEEEEEEEEEBSS--CCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGG-TE
T ss_pred cCCcEEEEEEEEEEECC--CeEEEE--CCcccCCCeEeCCceeCCCCCEEEEEEEEECHHHcCC-ceEEEEEEeCCC-Cc
Confidence 799999999998 441 457899 43332210 00 3468888888888 999999998776 34
Q ss_pred eeeEEEEEc
Q psy11131 132 QGSAELQLG 140 (150)
Q Consensus 132 ~~~~~l~v~ 140 (150)
.....+.+.
T Consensus 242 ~~~~~~~~~ 250 (256)
T 3sob_H 242 KVDKKVEPK 250 (256)
T ss_dssp EEEEECCCC
T ss_pred ceEEEeccc
Confidence 444444443
No 267
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.43 E-value=6.4e-13 Score=84.03 Aligned_cols=115 Identities=18% Similarity=0.258 Sum_probs=75.7
Q ss_pred CCceEEeC------CeEEEcCCCCCCCeEEEEEeccC--Cc--ceeEEEEEEEec---------CceE-EeCCCcEEEec
Q psy11131 9 GPRTRVLG------PILAIEGVTAEDSGTYRCSSSNI--GG--EATAEVRLQVST---------PYRV-DVNPPLLSVHL 68 (150)
Q Consensus 9 ~~~~~~~~------~~l~i~~~~~~d~G~Y~C~~~~~--~~--~~~~~~~l~v~~---------~~~~-~~~~~~~~~~~ 68 (150)
+.|+.+.. .+|.|.+++.+|+|.|.|.+.+. .. .....+.|.|.. +|.. ...+....+..
T Consensus 65 ~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~l~~~~~p~~~v~~p~~~~v~~ 144 (230)
T 1ypz_F 65 YKKMEASKNPSASTSILTIYSLEEEDEAIYYCSYGEGSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNL 144 (230)
T ss_dssp SSEEEEEECCTTTEEEEEECSCCGGGCSEEEEEECCTTTCCCCEECSCEEEEEECCCTTCCSCCSCCCCEECCCHHHHHH
T ss_pred CCeEEEEEcCCCCEEEEEECcCChhhCEEEEEEEECCCCCcccccCCCEEEEEecccccCcccCCCCceEECCCchhhcc
Confidence 46777653 37999999999999999999874 11 112335777762 1221 11122222345
Q ss_pred CCcEEEEEEec--CCCCCC-cEEEEee-cCcccCCCc---------c---eeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 69 DGSANFQCEIT--PYDSGP-YLIAWFK-DGRQIPGRT---------S---STSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 69 g~~~~l~C~~~--~p~~~~-~~~~w~~-~~~~~~~~~---------~---~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
|+.+.|.|.+. .| . +.+.|.+ ++..+.... . .+.|.+..... + |.|.|.+.+..+
T Consensus 145 g~~~~L~C~~~g~~P---~~~~v~W~~~~g~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-~~ytC~v~~~~~ 215 (230)
T 1ypz_F 145 HKTGTYLCLLEAFFP---DVIRVYWKEKDGNTILDSQEGDTLKTNDTYMKFSWLTVPERAM-G-KEHRCIVKHENN 215 (230)
T ss_dssp HSCEEEEEEEEEESS---CCCEEEEECTTSSCBCCCEECCCEEETTEEEEEEEEEECGGGT-T-SCEEEEEECSSC
T ss_pred CCcceEEEEEeeecC---CCeEEEEEccCCeEccccccceeecCCCCEEEEEEEEEEhhhC-C-CEEEEEEEECCC
Confidence 88899999998 46 4 6999999 766553211 0 24577776654 3 899999998765
No 268
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=99.43 E-value=1.5e-12 Score=73.93 Aligned_cols=88 Identities=27% Similarity=0.468 Sum_probs=65.7
Q ss_pred cCceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCc-----c-----eeeEEEc-----cCCCCCC
Q psy11131 53 TPYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRT-----S-----STSLVIN-----PVGREDR 116 (150)
Q Consensus 53 ~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~-----~-----~~~l~~~-----~~~~~~~ 116 (150)
.+|.+...+....+.+|+.+.|.|.+. .| .|.+.|++++..+.... . ...+.+. ++..+|.
T Consensus 8 ~pP~i~~~p~~~~v~~G~~v~L~C~~~g~P---~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~D~ 84 (117)
T 2v9t_A 8 FPPRIVEHPSDLIVSKGEPATLNCKAEGRP---TPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDE 84 (117)
T ss_dssp EEEEEEECCCCEEECTTCCEEECCEEEEES---CCEEEEEETTEECCCTTTCSSCSEEECTTSCEEESSCCCBTTBCSSC
T ss_pred CCCeeEcCCCCEEEcCCCcEEEEEECCccC---CCeEEEEECCEeccccCCCCcceeEEecCCcEEEEEEEeCCCCcCcC
Confidence 456666667778899999999999999 89 89999999987765331 0 2223333 4478999
Q ss_pred ceEEEEEEeCCCCceeeeEEEEEcCcC
Q psy11131 117 GIYQCIARRSDGDVAQGSAELQLGGTR 143 (150)
Q Consensus 117 g~y~C~~~~~~g~~~~~~~~l~v~~~p 143 (150)
|.|.|.+.|..|......+.+.+..+.
T Consensus 85 G~Y~C~a~N~~G~~~s~~~~l~~~~~~ 111 (117)
T 2v9t_A 85 GVYVCVARNYLGEAVSHDASLEVAAAA 111 (117)
T ss_dssp EEEEEEEEETTEEEECCCEEEEEC---
T ss_pred EEEEEEEEeCccceEeeeEEEEhhhhh
Confidence 999999999999666777888876654
No 269
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.43 E-value=4.9e-13 Score=85.62 Aligned_cols=114 Identities=18% Similarity=0.243 Sum_probs=74.1
Q ss_pred ceEEeCCe---EEEcCCCCCCCeEEEEEeccCCc------ceeEEEEEEEec------CceEEe-CCCcEEEecCCcEEE
Q psy11131 11 RTRVLGPI---LAIEGVTAEDSGTYRCSSSNIGG------EATAEVRLQVST------PYRVDV-NPPLLSVHLDGSANF 74 (150)
Q Consensus 11 ~~~~~~~~---l~i~~~~~~d~G~Y~C~~~~~~~------~~~~~~~l~v~~------~~~~~~-~~~~~~~~~g~~~~l 74 (150)
|+.+.... |.|.+++.+|+|.|+|.+.+..+ .....+.|.|.. +|.+.. .+....+..|+.+.|
T Consensus 65 R~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L 144 (253)
T 3to4_D 65 DYLATRVTDTELRLQVANMSQGRTLYCTSSADHWTNTGQLYFGEGSKLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATL 144 (253)
T ss_dssp EEEEECCSSSCCEEEEESCSSCEEEEEEEECSCCSTTCCEEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEE
T ss_pred cEEEEeCCCCeEEEccCChhhCeEEEEEEecCCCCcccceEECCCEEEEEecCCCCCCCCeEEEeCCChhhcccCCceEE
Confidence 66665522 99999999999999999986532 122334667763 222221 111111224688999
Q ss_pred EEEec--CCCCCCc-EEEEeecCcccCCC---------------cc----eeeEEEccCCCCC-CceEEEEEEeCC
Q psy11131 75 QCEIT--PYDSGPY-LIAWFKDGRQIPGR---------------TS----STSLVINPVGRED-RGIYQCIARRSD 127 (150)
Q Consensus 75 ~C~~~--~p~~~~~-~~~w~~~~~~~~~~---------------~~----~~~l~~~~~~~~~-~g~y~C~~~~~~ 127 (150)
.|.+. .| .+ .+.|++++..+... .. .+.|.+.....+| .|.|+|.+.+..
T Consensus 145 ~C~~~g~~P---~~i~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~~~ytC~v~h~~ 217 (253)
T 3to4_D 145 VCLATGFYP---DHVELSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYG 217 (253)
T ss_dssp EEEEEEEBS---SCEEEEEEETTEEECTTEEECSSCEESSTTCTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECC
T ss_pred EEEEceEEC---CcEEEEEEECCEECCCceecccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEeCC
Confidence 99998 55 55 89999988765431 11 2456666665556 679999999864
No 270
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.42 E-value=1.4e-12 Score=73.57 Aligned_cols=76 Identities=20% Similarity=0.248 Sum_probs=61.4
Q ss_pred EEEecCCcEEEEEEecCCCCCCcEEEEeecCcccCCCcc--------eeeEEEccCCCCCCceEEEEEEeCCCCceeeeE
Q psy11131 64 LSVHLDGSANFQCEITPYDSGPYLIAWFKDGRQIPGRTS--------STSLVINPVGREDRGIYQCIARRSDGDVAQGSA 135 (150)
Q Consensus 64 ~~~~~g~~~~l~C~~~~p~~~~~~~~w~~~~~~~~~~~~--------~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~ 135 (150)
..+.+|+.+.|.|.+..| .+.+.|++++..+..... ...|.|.++..+|.|.|.|.+.| .+..+
T Consensus 23 ~~~~~G~~v~L~C~~~~p---~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n-----~~~~~ 94 (113)
T 2cpc_A 23 VAAVRLERVVLTCELCRP---WAEVRWTKDGEEVVESPALLLQKEDTVRRLVLPAVQLEDSGEYLCEIDD-----ESASF 94 (113)
T ss_dssp EEEETTCCEEEEEEESCT---TCCCEEEETTEECCCBTTBEEEECSSEEEEEESSCCTTTCEEEEEESSS-----CEEEE
T ss_pred EEEEcCCeEEEEEEecCC---CCeEEEEECCEECccCCCEEEEECCCEEEEEECCCCcccCEEEEEEEec-----CcEEE
Confidence 567899999999998766 788999999887654332 25899999999999999999886 45677
Q ss_pred EEEEcCcCcccc
Q psy11131 136 ELQLGGTRNIKH 147 (150)
Q Consensus 136 ~l~v~~~p~~~~ 147 (150)
.|.|..+|..+.
T Consensus 95 ~l~V~~~p~~~~ 106 (113)
T 2cpc_A 95 TVTVTEPPVRII 106 (113)
T ss_dssp EEEEECCCCCCC
T ss_pred EEEEecCCchhc
Confidence 888888876544
No 271
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.42 E-value=1.3e-12 Score=83.62 Aligned_cols=117 Identities=20% Similarity=0.280 Sum_probs=76.3
Q ss_pred CCceEEeC-----CeEEEcCCCCCCCeEEEEEeccCC---cceeEEEEEEEec------CceEEe-CCCcEEEecCCcEE
Q psy11131 9 GPRTRVLG-----PILAIEGVTAEDSGTYRCSSSNIG---GEATAEVRLQVST------PYRVDV-NPPLLSVHLDGSAN 73 (150)
Q Consensus 9 ~~~~~~~~-----~~l~i~~~~~~d~G~Y~C~~~~~~---~~~~~~~~l~v~~------~~~~~~-~~~~~~~~~g~~~~ 73 (150)
..|+.+.. .+|.|.+++.+|+|.|.|.+.+.. ........|.|.. +|.+.. .+....+.+|+.+.
T Consensus 63 ~~R~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~ 142 (252)
T 1oga_E 63 AEGYSVSREKKESFPLTVTSAQKNPTAFYLCASSSRSSYEQYFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKAT 142 (252)
T ss_dssp CTTEEECCSSTTBCCEEECSCCSCCCEEEEEEEESSTTSCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEE
T ss_pred CCcEEEEecCCCEEEEEECcCChhhCEEEEEEEecCCccceeECCCEEEEEecccCCCCCCeEEEECCChhhhccCCceE
Confidence 36777653 589999999999999999998751 1112234577764 333332 22222233688999
Q ss_pred EEEEec--CCCCCC-cEEEEeecCcccCCC---------------cc----eeeEEEccCCCC-CCceEEEEEEeCCC
Q psy11131 74 FQCEIT--PYDSGP-YLIAWFKDGRQIPGR---------------TS----STSLVINPVGRE-DRGIYQCIARRSDG 128 (150)
Q Consensus 74 l~C~~~--~p~~~~-~~~~w~~~~~~~~~~---------------~~----~~~l~~~~~~~~-~~g~y~C~~~~~~g 128 (150)
|.|.+. .| . +.+.|++++..+... .. .+.|.+...... +.+.|+|.+.+...
T Consensus 143 L~C~~~g~~P---~~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l 217 (252)
T 1oga_E 143 LVCLATGFYP---DHVELSWWVNGKEVHSGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGL 217 (252)
T ss_dssp EEEEEEEEBS---SCEEEEEEETTEEECSSEEECSSCEESCTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCB
T ss_pred EEEEEeeEcC---CCcEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCC
Confidence 999998 46 4 599999988765321 10 233666554433 56789999999765
No 272
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.42 E-value=8.6e-13 Score=83.77 Aligned_cols=117 Identities=20% Similarity=0.296 Sum_probs=75.1
Q ss_pred CCceEEeC-----CeEEEcCCCCCCCeEEEEEeccCCc---c--eeEEEEEEEec------CceEEe-CCCcEEEecCCc
Q psy11131 9 GPRTRVLG-----PILAIEGVTAEDSGTYRCSSSNIGG---E--ATAEVRLQVST------PYRVDV-NPPLLSVHLDGS 71 (150)
Q Consensus 9 ~~~~~~~~-----~~l~i~~~~~~d~G~Y~C~~~~~~~---~--~~~~~~l~v~~------~~~~~~-~~~~~~~~~g~~ 71 (150)
..|+.+.. .+|.|.+++.+|+|.|.|.+.+..+ . ......|.|.. +|.+.. .+....+..|+.
T Consensus 59 ~~R~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~ 138 (238)
T 1bec_A 59 PDGYKASRPSQEQFSLILELATPSQTSVYFCASGGGRGSYAEQFFGPGTRLTVLEDLRQVTPPKVSLFEPSKAEIANKQK 138 (238)
T ss_dssp CTTCEEECCSSSEEEEEESSCCGGGCEEEEEEEESCTTCGGGCEECCCEEEEEESCGGGCBCCEEEEECCCSTTCSSSCS
T ss_pred cceEEEEecCCCEEEEEEecCCcccCEEEEEEEecCCCCccccccCCCEEEEEeccCCCCCCCceEEECCChHHcccCCc
Confidence 46776642 4799999999999999999987631 1 12234677765 333332 232223457899
Q ss_pred EEEEEEec-C-CCCCC-cEEEEeecCcccCCCcc---------------eeeEEEccCCCCC-CceEEEEEEeCCC
Q psy11131 72 ANFQCEIT-P-YDSGP-YLIAWFKDGRQIPGRTS---------------STSLVINPVGRED-RGIYQCIARRSDG 128 (150)
Q Consensus 72 ~~l~C~~~-~-p~~~~-~~~~w~~~~~~~~~~~~---------------~~~l~~~~~~~~~-~g~y~C~~~~~~g 128 (150)
+.|.|.+. . | . +.+.|++++..+..... .+.|.+......| .|.|.|.+.+...
T Consensus 139 ~~L~C~~~g~~P---~~~~v~W~~~g~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l 211 (238)
T 1bec_A 139 ATLVCLARGFFP---DHVELSWWVNGKEVHSGVSTDPQAYKESNYSYCLSSRLRVSATFWHNPRNHFRCQVQFHGL 211 (238)
T ss_dssp CSEEEEEEEEBS---CCEEEEEEETTEEECTTEEECSSCEEEETTEEEEEEEECCCHHHHTCTTCEEEEEEEECCC
T ss_pred eEEEEEEeeEeC---CCcEEEEEECCEECCCceecccceEeCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEcCCC
Confidence 99999998 4 6 4 49999998876543210 1123333322223 5679999999754
No 273
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.42 E-value=6.7e-12 Score=69.27 Aligned_cols=83 Identities=23% Similarity=0.276 Sum_probs=64.7
Q ss_pred CceEEeCCCc-EEEecCCcEEEEEEecCCCCCCcEEEEeecCcccCCCcc--------eeeEEEccCCCCCCceEEEEEE
Q psy11131 54 PYRVDVNPPL-LSVHLDGSANFQCEITPYDSGPYLIAWFKDGRQIPGRTS--------STSLVINPVGREDRGIYQCIAR 124 (150)
Q Consensus 54 ~~~~~~~~~~-~~~~~g~~~~l~C~~~~p~~~~~~~~w~~~~~~~~~~~~--------~~~l~~~~~~~~~~g~y~C~~~ 124 (150)
+|.+...+.. ..+.+|+.+.|.|.+..| .+.+.|++++..+..... ...|.|.++..+|.|.|.|.+
T Consensus 7 ~p~~~~~~~~~~~v~~G~~v~l~C~~~~p---~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a- 82 (100)
T 2yuv_A 7 GAAFAKILDPAYQVDKGGRVRFVVELADP---KLEVKWYKNGQEIRPSTKYIFEHKGCQRILFINNCQMTDDSEYYVTA- 82 (100)
T ss_dssp SCCEEECCCSCEEECTTEEEEEEEEESCT---TSCEEEEESSCBCCCBTTEEEEEETTEEEEEEEEECTTTCCEEEEEE-
T ss_pred CCeEEecCCCccEEcCCCcEEEEEEecCC---CceEEEEECCEECCCCCCEEEEecCCEEEEEEcCCCcCcCEEEEEEE-
Confidence 3444444444 577899999999998766 789999999887754433 346999999999999999998
Q ss_pred eCCCCceeeeEEEEEcCcCc
Q psy11131 125 RSDGDVAQGSAELQLGGTRN 144 (150)
Q Consensus 125 ~~~g~~~~~~~~l~v~~~p~ 144 (150)
| .....+.|.|.++|.
T Consensus 83 ---g-~~~~~~~l~V~~~P~ 98 (100)
T 2yuv_A 83 ---G-DEKCSTELFVRSGPS 98 (100)
T ss_dssp ---T-TEEEEEEEEECCSCC
T ss_pred ---C-CceEEEEEEEecCCC
Confidence 4 467788899988763
No 274
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.41 E-value=1.1e-12 Score=72.30 Aligned_cols=78 Identities=17% Similarity=0.372 Sum_probs=62.9
Q ss_pred EEEecCCcEEEEEEecCCCCCCcEEEEeecCcccCCCcc----eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEE
Q psy11131 64 LSVHLDGSANFQCEITPYDSGPYLIAWFKDGRQIPGRTS----STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQL 139 (150)
Q Consensus 64 ~~~~~g~~~~l~C~~~~p~~~~~~~~w~~~~~~~~~~~~----~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v 139 (150)
..+.+|+.+.|.|.+..+ ++.+.|++++..+..... ...|.|.++...|.|.|.|.+.|..| .....+.|.|
T Consensus 13 ~~v~~G~~v~L~C~~~g~---pp~i~W~k~g~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g-~~~~~~~l~V 88 (99)
T 2cr3_A 13 FLVHPGDLLQLRCRLRDD---VQSINWLRDGVQLAESNRTRITGEEVEVQDSVPADSGLYACVTSSPSG-SDTTYFSVNV 88 (99)
T ss_dssp CCBCTTSCEEEECCCCSS---CCEEEEEESSSBCCCCSSEEECSSEEEETTCCTTTCEEEEEEEEETTE-EEEEEEEECB
T ss_pred eEEeCCCcEEEEEEecCC---CCeEEEEECCEECCCCCcEEEECCEEEEccCCHHHCEEEEEEEEeCCc-eEEEEEEEEE
Confidence 446789999999988733 359999999877754433 45899999999999999999999998 5777888888
Q ss_pred cCcCcc
Q psy11131 140 GGTRNI 145 (150)
Q Consensus 140 ~~~p~~ 145 (150)
.+.|+.
T Consensus 89 ~~~~~s 94 (99)
T 2cr3_A 89 SDALPS 94 (99)
T ss_dssp CSCCSC
T ss_pred ecCCCC
Confidence 876654
No 275
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=99.41 E-value=6.9e-12 Score=70.22 Aligned_cols=87 Identities=24% Similarity=0.407 Sum_probs=67.5
Q ss_pred ecCceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCcc----------------eeeEEEccCCCC
Q psy11131 52 STPYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRTS----------------STSLVINPVGRE 114 (150)
Q Consensus 52 ~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~~----------------~~~l~~~~~~~~ 114 (150)
..+|.+...+....+.+|+.+.|.|.+. .|.. .+.+.|++++..+..... ...|.|.++..+
T Consensus 8 ~~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~-~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 86 (112)
T 3so5_A 8 FPXPQITVQPETQSAIXGSDVSFTCSAASSSDS-PMTFAWXXDNEALQDAEMENYAHLRAQGGELMEYTTILRLRNVEFT 86 (112)
T ss_dssp CCSCEEEECCCCEEECTTCCEEEEEEEEESCCC-CCEEEEEETTEECTTCEEEEEEETTGGGSSCEEEEEEEEECSCCGG
T ss_pred CCCCeEEeCCCCcEEECCCCEEEEEEEecCCCC-CEEEEEccCCcccccccccceeeeeccCCCccccceEEEEeccccc
Confidence 3456666677778899999999999987 4411 589999999877654321 268999999999
Q ss_pred CCceEEEEEEeCCCCceeeeEEEEE
Q psy11131 115 DRGIYQCIARRSDGDVAQGSAELQL 139 (150)
Q Consensus 115 ~~g~y~C~~~~~~g~~~~~~~~l~v 139 (150)
|.|.|.|.+.|..|...+..+.|.|
T Consensus 87 D~G~Y~C~a~n~~g~~~s~~~~l~V 111 (112)
T 3so5_A 87 SEGXYQCVISNHFGSSYSVXAXLTI 111 (112)
T ss_dssp GCEEEEEEEEETTEEEECCCEEEEE
T ss_pred cCCeEEEEEEeCCCcEEEeEEEEEe
Confidence 9999999999998843557777766
No 276
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.41 E-value=1.6e-12 Score=72.29 Aligned_cols=83 Identities=14% Similarity=0.269 Sum_probs=63.1
Q ss_pred CceEEeCCCc---EEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCcc--------eeeEEEccCCCCCCceEEE
Q psy11131 54 PYRVDVNPPL---LSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRTS--------STSLVINPVGREDRGIYQC 121 (150)
Q Consensus 54 ~~~~~~~~~~---~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~~--------~~~l~~~~~~~~~~g~y~C 121 (150)
+|.+...+.. ..+.+|+.+.|.|.+. .| .+ +.|++++..+..... ...|.|.++..+|.|.|.|
T Consensus 7 ~P~~~~~p~~~~~~~v~~G~~v~l~C~~~~~p---~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C 82 (104)
T 2e6p_A 7 GPVHILSPQDKVSLTFTTSERVVLTCELSRVD---FP-ATWYKDGQKVEESELLVVKMDGRKHRLILPEAKVQDSGEFEC 82 (104)
T ss_dssp SSCCCCBCCSCEEEEEESSSCEECCEECSSTT---CC-CEEEETTEECCCBTTBEEEEETTEEEEEESSCCTTTCEEEEE
T ss_pred CCCEEECCCCCccEEEeCCCcEEEEEEecCCC---Cc-cEEeeCCEECCCCCCEEEEeCCCEEEEEECCCChhhCEEEEE
Confidence 3444444444 6789999999999998 77 77 999999887754432 3579999999999999999
Q ss_pred EEEeCCCCceeeeEEEEEcCcCcc
Q psy11131 122 IARRSDGDVAQGSAELQLGGTRNI 145 (150)
Q Consensus 122 ~~~~~~g~~~~~~~~l~v~~~p~~ 145 (150)
.+.|.. ..+.|.|.++|..
T Consensus 83 ~a~n~~-----~~~~l~V~~~P~p 101 (104)
T 2e6p_A 83 RTEGVS-----AFFGVTVQDPSGP 101 (104)
T ss_dssp ECSSCC-----CCEEEEEECCCCS
T ss_pred EECCce-----EEEEEEEcCCCCC
Confidence 998753 3567777776643
No 277
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.40 E-value=6.4e-12 Score=78.45 Aligned_cols=131 Identities=15% Similarity=0.112 Sum_probs=86.4
Q ss_pred CceEEeC----CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCceEEeCCCcEEEecCCcEEEEEEec-CCCCC
Q psy11131 10 PRTRVLG----PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCEIT-PYDSG 84 (150)
Q Consensus 10 ~~~~~~~----~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~ 84 (150)
.++.+.. +.|.|.++..+|+|.|.|.+.|..|.....+.|.|..+|...... .....+..+.+.|... .....
T Consensus 65 ~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~P~~p~~~--~~~~~~~~~~l~w~~p~~~~~~ 142 (215)
T 3mtr_A 65 SNIKIYNTPSASYLEVTPDSENDFGNYNCTAVNRIGQESLEFILVQADTPSSPSID--QVEPYSSTAQVQFDEPEATGGV 142 (215)
T ss_dssp CSEEEEEETTEEEEEECCCSGGGCEEEEEEEECSSCEEEEEEEEEECCCCCCCEEE--EEEEETTEEEEEEECCSCCCSS
T ss_pred ccEEEecCCCeeEEEEecCChhhCeEEEEEEEECCCceEEEEEEEECCCCCCCcce--EEEEecceEEEEEecCCccCCC
Confidence 4555542 689999999999999999999999988888889888654321111 1123456688888743 21110
Q ss_pred -Cc--EEEEeecCcccCCCcc--------eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCcC
Q psy11131 85 -PY--LIAWFKDGRQIPGRTS--------STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGTR 143 (150)
Q Consensus 85 -~~--~~~w~~~~~~~~~~~~--------~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p 143 (150)
.. .+.|..++........ ...+.+.++...+.|.|.|.+.|..|. ...+..+.+..+|
T Consensus 143 pi~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~l~i~~L~~~~~y~~~~~A~N~~G~-s~~S~~~~v~T~p 211 (215)
T 3mtr_A 143 PILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAALNGKGL-GEISAASEFKTQP 211 (215)
T ss_dssp CEEEEEEEEEETTCCCCEEEEEEHHHHHHHTEEEEECCCTTCEEEEEEEEEESSCB-CCCCCCEEEECCC
T ss_pred ceEEEEEEEEECCCCcccccccccccccccccEEECCCCCCCEEEEEEEEEeCCcc-cCcccceeeEecc
Confidence 22 3667665543111100 267999999999999999999999983 4334444454444
No 278
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.40 E-value=1e-13 Score=91.72 Aligned_cols=109 Identities=13% Similarity=0.232 Sum_probs=74.3
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEe---cCceE-EeCCCcEEEecCCcEEEEEEec--CCCCCCc---E
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVS---TPYRV-DVNPPLLSVHLDGSANFQCEIT--PYDSGPY---L 87 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~---~~~~~-~~~~~~~~~~~g~~~~l~C~~~--~p~~~~~---~ 87 (150)
..|.|.+....|.|.|+|.+.+..+.....+.+.+. ..+.+ ...+....+.+|+.+.|.|.+. .| .+ .
T Consensus 72 s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P---~p~~~~ 148 (323)
T 2wqr_A 72 SELTLSQKHWLSDRTYTCQVTYQGHTFEDSTKKCADSNPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAP---SKGTVQ 148 (323)
T ss_dssp EEEEEEHHHHHTTCCEEEEEEETTEEEEEEECCCCCSSGGGCEEEECCCCHHHHHTSSCCEEEEEEEEECC---CSSCCE
T ss_pred EEEEEcHHHcCCCCcEEEEEEeCCCCcceeeecCCCCCCCCCEEEEcCCCHHHhccCCeEEEEEEEeccCC---CCCceE
Confidence 467788877889999999999876544333222111 12223 3334444467899999999987 45 55 9
Q ss_pred EEEeecC-cccCCCc---------c---eeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 88 IAWFKDG-RQIPGRT---------S---STSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 88 ~~w~~~~-~~~~~~~---------~---~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
+.|++++ ..+.... . ...|.|.++..+|.|.|.|.+.|..+
T Consensus 149 i~W~k~~g~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~ 202 (323)
T 2wqr_A 149 LTWSRASGKPVNHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHL 202 (323)
T ss_dssp EEEEETTCCCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTS
T ss_pred EEEEECCCcccccccCCCccCCCCCEEEEEEEEECHHHccCCCCEEEEEECCCC
Confidence 9999864 3332110 0 34689999999999999999998764
No 279
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=99.39 E-value=3.8e-12 Score=70.61 Aligned_cols=83 Identities=20% Similarity=0.279 Sum_probs=64.9
Q ss_pred ceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCcc--------eeeEEEccCCCCCCceEEEEEEe
Q psy11131 55 YRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRTS--------STSLVINPVGREDRGIYQCIARR 125 (150)
Q Consensus 55 ~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~~--------~~~l~~~~~~~~~~g~y~C~~~~ 125 (150)
|.+...+....+.+|+.+.|.|.+. .| .+ +.|++++..+..... ...|.|.++..+|.|.|.|.
T Consensus 9 p~~~~~~~~~~v~~G~~v~l~C~~~~~p---~~-v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~--- 81 (103)
T 2e7b_A 9 VRFQEALKDLEVLEGGAATLRCVLSSVA---AP-VKWCYGNNVLRPGDKYSLRQEGAMLELVVRNLRPQDSGRYSCS--- 81 (103)
T ss_dssp CCCTBCCCCEEEESSSCEEEEEECSSCC---CS-CEEEESSSBCCCSSSEEEEECSSEEEEEECSCCTTTCCCEEEE---
T ss_pred CEEEecCccEEEECCCcEEEEEEEeCCC---CC-eEEEECCEECCCCCcEEEEEcCCEEEEEEccCCcccCEEEEEE---
Confidence 3444456678899999999999998 77 77 999999887754432 34699999999999999998
Q ss_pred CCCCceeeeEEEEEcCcCccc
Q psy11131 126 SDGDVAQGSAELQLGGTRNIK 146 (150)
Q Consensus 126 ~~g~~~~~~~~l~v~~~p~~~ 146 (150)
.| .....+.|.|.++|..+
T Consensus 82 -~g-~~~~~~~l~V~~~p~~~ 100 (103)
T 2e7b_A 82 -FG-DQTTSATLTVTALPSGP 100 (103)
T ss_dssp -CS-SCBCCBCEEEECCCCCS
T ss_pred -EC-CcEEEEEEEEEeccccc
Confidence 44 45677888888877654
No 280
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.38 E-value=3.8e-12 Score=70.64 Aligned_cols=81 Identities=20% Similarity=0.306 Sum_probs=64.3
Q ss_pred EEeCCCcEEEecCCcEEEEEEecCCCCCCcEEEEeecCcccCCCc--c--------eeeEEEccCCCCCCceEEEEEEeC
Q psy11131 57 VDVNPPLLSVHLDGSANFQCEITPYDSGPYLIAWFKDGRQIPGRT--S--------STSLVINPVGREDRGIYQCIARRS 126 (150)
Q Consensus 57 ~~~~~~~~~~~~g~~~~l~C~~~~p~~~~~~~~w~~~~~~~~~~~--~--------~~~l~~~~~~~~~~g~y~C~~~~~ 126 (150)
+...+....+.+|+.+.|.|.+..| .+.+.|++++..+.... + ...|.|.++..+|.|.|.|.+.|
T Consensus 10 ~~~~~~~~~v~~G~~v~l~C~~~~~---~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n- 85 (103)
T 1x44_A 10 VTKQLEDTTAYCGERVELECEVSED---DANVKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYSVMTTG- 85 (103)
T ss_dssp CSBCCCCEEEETTEEEEEEEECSSS---SCCCEEEETTEECCCSTTCSEEEEEETTEEEEEEEEECTTTCSEEEEEETT-
T ss_pred eeccCCCEEEECCCCEEEEEEecCC---CCeEEEEECCEECCCCCceEEEEEEcCCEEEEEECCCCcccCEEEEEEECC-
Confidence 4445666788999999999998765 68899999998776544 1 25799999999999999999875
Q ss_pred CCCceeeeEEEEEcCcCcc
Q psy11131 127 DGDVAQGSAELQLGGTRNI 145 (150)
Q Consensus 127 ~g~~~~~~~~l~v~~~p~~ 145 (150)
.+..+.|.|..+|..
T Consensus 86 ----~~~~~~l~V~~~p~p 100 (103)
T 1x44_A 86 ----GQSSAKLSVDLKSGP 100 (103)
T ss_dssp ----EEEEEEEEEECCCSC
T ss_pred ----CcEEEEEEEeCCCCC
Confidence 466778888776654
No 281
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.38 E-value=1.3e-12 Score=74.15 Aligned_cols=82 Identities=20% Similarity=0.272 Sum_probs=64.5
Q ss_pred EEeCCCcEEEecCCcEEEEEEec-C---CCCCCcEEEEeecCc-ccCCC--cc--------------eeeEEEccCCCCC
Q psy11131 57 VDVNPPLLSVHLDGSANFQCEIT-P---YDSGPYLIAWFKDGR-QIPGR--TS--------------STSLVINPVGRED 115 (150)
Q Consensus 57 ~~~~~~~~~~~~g~~~~l~C~~~-~---p~~~~~~~~w~~~~~-~~~~~--~~--------------~~~l~~~~~~~~~ 115 (150)
+...|....+.+|+.+.|.|.+. . | .|.+.|+++.. .+... .. ...|.|.++...|
T Consensus 15 f~~~P~~v~V~eG~~v~L~C~v~g~~~~p---~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 91 (118)
T 2edn_A 15 FLKKPDSVSVETGKDAVVVAKVNGKELPD---KPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVLGD 91 (118)
T ss_dssp CSBCCCCCEEETTSCEECCEEEETTTSSS---CCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCTTT
T ss_pred EEECCCCeEEeCCCCEEEEEEEeccCCCC---CCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCChhh
Confidence 34456778899999999999997 4 6 89999998631 11100 00 3679999999999
Q ss_pred CceEEEEEEeCCCCceeeeEEEEEcCc
Q psy11131 116 RGIYQCIARRSDGDVAQGSAELQLGGT 142 (150)
Q Consensus 116 ~g~y~C~~~~~~g~~~~~~~~l~v~~~ 142 (150)
.|.|.|.+.|..| ..+..+.|.|..+
T Consensus 92 ~G~Y~Cevsn~~g-~~s~~~~L~V~~~ 117 (118)
T 2edn_A 92 RGYYRLEVKAKDT-CDSCGFNIDVEAP 117 (118)
T ss_dssp CSCEEEEEECSSC-EEEEEECCEEECC
T ss_pred CEEEEEEEEEcCC-cEEEEEEEEEEcC
Confidence 9999999999999 6888999988774
No 282
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.37 E-value=3e-12 Score=71.28 Aligned_cols=83 Identities=16% Similarity=0.202 Sum_probs=64.2
Q ss_pred eEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCcc--------eeeEEEccCCCCCCceEEEEEEeC
Q psy11131 56 RVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRTS--------STSLVINPVGREDRGIYQCIARRS 126 (150)
Q Consensus 56 ~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~~--------~~~l~~~~~~~~~~g~y~C~~~~~ 126 (150)
.+...+....+.+|+.+.|.|.+. .|. .+.+.|++++..+....+ ...|.|.++..+|+|.|.|.+.
T Consensus 10 ~~~~~~~~~~v~~G~~v~l~C~v~~~~~--~~~v~W~k~g~~i~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~-- 85 (104)
T 2eny_A 10 GITKRLKTMEVLEGESCSFECVLSHESA--SDPAMWTVGGKTVGSSSRFQATRQGRKYILVVREAAPSDAGEVVFSVR-- 85 (104)
T ss_dssp CCSBCCCCEEEESSCCEEEEEECSSCCC--SSCBCCBSSSSBCSBCSSCEEEEETTEEEEEECSCCTTTCSCEEEEET--
T ss_pred EEEecCCCcEEcCCCcEEEEEEEcCCCC--CceeEEEECCEECCCCCCEEEEEcCCEEEEEECCCCHHHCEEEEEEEC--
Confidence 344456678899999999999998 551 347999999987754433 3479999999999999999874
Q ss_pred CCCceeeeEEEEEcCcCcc
Q psy11131 127 DGDVAQGSAELQLGGTRNI 145 (150)
Q Consensus 127 ~g~~~~~~~~l~v~~~p~~ 145 (150)
....++.|.|.++|..
T Consensus 86 ---~~~~~a~L~V~~~p~~ 101 (104)
T 2eny_A 86 ---GLTSKASLIVRERSGP 101 (104)
T ss_dssp ---TEEEEECEEEECCCSS
T ss_pred ---CeeEEEEEEEeCCCcC
Confidence 3567888888887754
No 283
>3f8u_B Tapasin; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens}
Probab=99.37 E-value=8.2e-12 Score=84.31 Aligned_cols=109 Identities=18% Similarity=0.258 Sum_probs=75.3
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCceEEeCCCcEE-EecCC-cEEEEEEec--CCCCCC--cEEEE
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVDVNPPLLS-VHLDG-SANFQCEIT--PYDSGP--YLIAW 90 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~-~~~g~-~~~l~C~~~--~p~~~~--~~~~w 90 (150)
.+|.|.+++.+|.|.|.|.+.+..+.....+.|.|..+|.+...+.... ...|+ .+.|.|.+. .| . +.+.|
T Consensus 254 ~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~v~L~V~~pP~V~v~p~~~~~~~~G~~~vtL~C~a~GfyP---~~~~~VtW 330 (401)
T 3f8u_B 254 GTFWLPRVQPFQEGTYLATIHLPYLQGQVTLELAVYKPPKVSLMPATLARAAPGEAPPELLCLVSHFYP---SGGLEVEW 330 (401)
T ss_dssp EEEEETTCCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCEEEEESSSCCCCCTTCCCCCEEEEEEEEBS---STTCEEEE
T ss_pred EEEEECcCCHhhCceEEEEEEecccceeEEEEEeeccCCeEeeccCcceeecCCCccEEEEEEecCCcC---CCCcEEEE
Confidence 7899999999999999999988777777778889988877665443332 34575 789999998 56 5 79999
Q ss_pred e-ecCc---c--cCC-----C-----cc----eeeEEEccCCC-CCCceEEEEEEeCCC
Q psy11131 91 F-KDGR---Q--IPG-----R-----TS----STSLVINPVGR-EDRGIYQCIARRSDG 128 (150)
Q Consensus 91 ~-~~~~---~--~~~-----~-----~~----~~~l~~~~~~~-~~~g~y~C~~~~~~g 128 (150)
. +++. . ... . +. .+.|.+..... .+.+.|+|.+.+...
T Consensus 331 ~~rdg~~g~~~~~~~~~~~s~~~~~~DGTysvsS~L~V~~~~~e~~g~~YTC~V~H~sL 389 (401)
T 3f8u_B 331 ELRGGPGGRSQKAEGQRWLSALRHHSDGSVSLSGHLQPPPVTTEQHGARYACRIHHPSL 389 (401)
T ss_dssp EEESSSSCSCEECCSEEEECCCEECTTSCEEEEEEEECCCCCGGGTTCEEEEEEECTTS
T ss_pred EecCCCCCceecccccccccccccCCCceEEEEEEEEEccCccccCCCEEEEEEEcCCC
Confidence 5 6541 1 110 0 00 23444444322 234589999998763
No 284
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.37 E-value=1.5e-11 Score=76.79 Aligned_cols=87 Identities=23% Similarity=0.368 Sum_probs=71.5
Q ss_pred CceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCcc----------eeeEEEccCCCCCCceEEEE
Q psy11131 54 PYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRTS----------STSLVINPVGREDRGIYQCI 122 (150)
Q Consensus 54 ~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~~----------~~~l~~~~~~~~~~g~y~C~ 122 (150)
+|.+ ..+....+.+|+.+.|.|.+. .| .+.+.|++++..+..... ...|.|.++...|.|.|.|.
T Consensus 19 ~P~~-~~p~~~~~~~G~~v~l~C~~~g~p---~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 94 (215)
T 3mtr_A 19 APKL-QGPVAVYTWEGNQVNITCEVFAYP---SATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCT 94 (215)
T ss_dssp EEEE-ECCSEEEECTTCCEEEEEEEEEES---CCEEEEEETTEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEEEE
T ss_pred CCcc-cCCceEEEECCCCEEEEEEEeecC---CCEEEEEECCeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEEEE
Confidence 3444 456667888999999999999 89 899999999987765421 46799999999999999999
Q ss_pred EEeCCCCceeeeEEEEEcCcCcc
Q psy11131 123 ARRSDGDVAQGSAELQLGGTRNI 145 (150)
Q Consensus 123 ~~~~~g~~~~~~~~l~v~~~p~~ 145 (150)
+.|..| .....+.+.+..+|..
T Consensus 95 a~n~~g-~~~~~~~l~v~~~P~~ 116 (215)
T 3mtr_A 95 AVNRIG-QESLEFILVQADTPSS 116 (215)
T ss_dssp EECSSC-EEEEEEEEEECCCCCC
T ss_pred EEECCC-ceEEEEEEEECCCCCC
Confidence 999999 5778888888776654
No 285
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.37 E-value=1.5e-11 Score=75.55 Aligned_cols=87 Identities=22% Similarity=0.404 Sum_probs=70.7
Q ss_pred CceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCcc----------eeeEEEccCCCCCCceEEEE
Q psy11131 54 PYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRTS----------STSLVINPVGREDRGIYQCI 122 (150)
Q Consensus 54 ~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~~----------~~~l~~~~~~~~~~g~y~C~ 122 (150)
+|.+...+....+.+|+.+.|.|.+. .| .+.+.|++++..+..... ...|.|.++..+|.|.|.|.
T Consensus 4 ~P~~~~~~~~~~v~~G~~v~l~C~~~~~p---~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 80 (197)
T 2j8h_A 4 APHFKEELRNLNVRYQSNATLVCKVTGHP---KPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVR 80 (197)
T ss_dssp CCEEEECCCCEEEETTSCEEEEEEEECSS---CCEEEEEETTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEEE
T ss_pred CCEEEEcCCccEEcCCCEEEEEEEEeecC---CCEEEEEECCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEE
Confidence 45666667778899999999999998 88 899999999877654321 23899999999999999999
Q ss_pred EEeCCCCceeeeEEEEEcCcCc
Q psy11131 123 ARRSDGDVAQGSAELQLGGTRN 144 (150)
Q Consensus 123 ~~~~~g~~~~~~~~l~v~~~p~ 144 (150)
+.|..| .....+.|.|..+|.
T Consensus 81 ~~n~~g-~~~~~~~l~V~~~p~ 101 (197)
T 2j8h_A 81 ATNQGG-SVSGTASLEVEVPAK 101 (197)
T ss_dssp EEETTE-EEEEEEEEEEEEEEE
T ss_pred EEECCC-ceeEEEEEEEcCCCc
Confidence 999887 567778888776543
No 286
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.36 E-value=7e-12 Score=69.91 Aligned_cols=69 Identities=26% Similarity=0.388 Sum_probs=57.1
Q ss_pred CceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCcc--------eeeEEEccCCCCCCceEEEEEE
Q psy11131 54 PYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRTS--------STSLVINPVGREDRGIYQCIAR 124 (150)
Q Consensus 54 ~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~~--------~~~l~~~~~~~~~~g~y~C~~~ 124 (150)
++.+...+....+.+|+.+.|.|.+. .| .+ +.|++++..+..... ...|.|.++..+|.|.|.|.+.
T Consensus 8 ~p~~~~~~~~~~v~~G~~v~l~C~~~~~~---~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 83 (106)
T 2dlt_A 8 QLEVLQDIADLTVKAAEQAVFKCEVSDEK---VT-GKWYKNGVEVRPSKRITISHVGRFHKLVIDDVRPEDEGDYTFVPD 83 (106)
T ss_dssp CCCEEECCCCEEEESSCCEECCCEESCSS---CE-EEEEESSCBCCCCSSCEEEEETTEEEEEESSCCTTTCSCEEEEEE
T ss_pred CCEEecCCCCeEEeCCCeEEEEEEEcCCC---cc-eEEEcCCEECcCCCCEEEEEeCCEEEEEECCCCcCCCEEEEEEEc
Confidence 34555666778899999999999998 77 66 999999887754433 2479999999999999999999
Q ss_pred eC
Q psy11131 125 RS 126 (150)
Q Consensus 125 ~~ 126 (150)
|.
T Consensus 84 n~ 85 (106)
T 2dlt_A 84 GY 85 (106)
T ss_dssp TS
T ss_pred cC
Confidence 87
No 287
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.36 E-value=7.3e-12 Score=76.77 Aligned_cols=89 Identities=22% Similarity=0.400 Sum_probs=71.4
Q ss_pred cCceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCcc--------eeeEEEccCCCCCCceEEEEE
Q psy11131 53 TPYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRTS--------STSLVINPVGREDRGIYQCIA 123 (150)
Q Consensus 53 ~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~~--------~~~l~~~~~~~~~~g~y~C~~ 123 (150)
.+|.+...+....+.+|+.+.|.|.+. .| .+.+.|++++..+..... ...|.|.++..+|.|.|.|.+
T Consensus 6 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p---~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 82 (197)
T 3lcy_A 6 EAPGIRKEMKDVTTKLGEAAQLSCQIVGRP---LPDIKWYRFGKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIA 82 (197)
T ss_dssp EEEEEEECCCCEEEETTSEEEEEEEEEEES---CCEEEEEETTEEECCCSSEEEEESSSEEEEEEECCSGGGCEEEEEEE
T ss_pred CCCcccccCCceEEeCCCcEEEEEEEecCC---CCEEEEEECCEECCCCccEEEEeCCCEEEEEEecCCccCCEEEEEEE
Confidence 345666677778899999999999998 88 889999999877654432 237999999999999999999
Q ss_pred EeCCCCceeeeEEEEEcCcCcc
Q psy11131 124 RRSDGDVAQGSAELQLGGTRNI 145 (150)
Q Consensus 124 ~~~~g~~~~~~~~l~v~~~p~~ 145 (150)
.+..+ .....+.+.|..+|..
T Consensus 83 ~n~~~-~~~~~~~l~v~~~p~~ 103 (197)
T 3lcy_A 83 TNEVG-EVETSSKLLLQATPQF 103 (197)
T ss_dssp ECSSC-EEEEEEEEEEEEEEEE
T ss_pred ECCCC-ceeEEEEEEEEcCCCC
Confidence 99888 5667777777665543
No 288
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.36 E-value=1.1e-11 Score=70.70 Aligned_cols=83 Identities=14% Similarity=0.220 Sum_probs=63.8
Q ss_pred CcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccC------CCc----------ceeeEEEccCCCCCCceEEEEEE
Q psy11131 62 PLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIP------GRT----------SSTSLVINPVGREDRGIYQCIAR 124 (150)
Q Consensus 62 ~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~------~~~----------~~~~l~~~~~~~~~~g~y~C~~~ 124 (150)
....+.+|+.+.|.|.+. .|.. .+.+.|++++..+. ... ....|.|.++..+|+|.|.|.+.
T Consensus 16 ~~v~v~~G~~v~L~C~~~g~p~~-~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~ 94 (122)
T 3s35_X 16 HGIELSVGEKLVLNCTARTELNV-GIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAAS 94 (122)
T ss_dssp SCEEEEETCCEEEEEEEEECTTC-CCEEEEECSCTTCCHHHHBCCSCCEEEETTEEEEEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCEEEecCCeEEEEEEEEcCCCC-cEEEEEECCCcccCCceeeeeccccccCCceeeEEEEEEECCCCcccCEEEEEEEc
Confidence 345788999999999998 5511 47899999876432 110 13579999999999999999999
Q ss_pred eCCCCceeeeEEEEEcCcCccc
Q psy11131 125 RSDGDVAQGSAELQLGGTRNIK 146 (150)
Q Consensus 125 ~~~g~~~~~~~~l~v~~~p~~~ 146 (150)
|..| .....+.|.|.++|-+.
T Consensus 95 n~~g-~~~~~~~l~V~~~p~i~ 115 (122)
T 3s35_X 95 SGLM-TKKNSTFVRVHEKPFVA 115 (122)
T ss_dssp CSSC-EEEEEEEEEEEEEECC-
T ss_pred cCCC-ceEEEEEEEEeccCeEE
Confidence 9999 57788899998877553
No 289
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.35 E-value=2.7e-13 Score=86.30 Aligned_cols=109 Identities=13% Similarity=0.164 Sum_probs=70.4
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEE----EEecCceEEeCCCcEEEecCCcEEEEEEec--CCCCCC-cEEE
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRL----QVSTPYRVDVNPPLLSVHLDGSANFQCEIT--PYDSGP-YLIA 89 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l----~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~--~p~~~~-~~~~ 89 (150)
..|.|.++..+|.|.|+|.+.+..+.......+ .+..+|.+...+.......|..+.|.|.+. .| . ..+.
T Consensus 82 s~L~I~~~~~~D~g~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P---~~~~v~ 158 (239)
T 1i1c_A 82 SELPIVERDWLNGKTFKCKVNSGAFPAPIEKSISKPEGTPRGPQVYTMAPPKEEMTQSQVSITCMVKGFYP---PDIYTE 158 (239)
T ss_dssp EEEECCHHHHHTTCCEEEEEECSSSSSCEEEEECCCSSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBS---SCCEEE
T ss_pred EEEEEEhhHccCCCeEEEEEecccCCCCcEEEEecCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeeeEC---CCeEEE
Confidence 579999999999999999999876653222222 233445544333221123477899999997 45 4 5899
Q ss_pred EeecCcccCCCcc-------------eeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 90 WFKDGRQIPGRTS-------------STSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 90 w~~~~~~~~~~~~-------------~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
|++++..+..... .+.|.+......+.|.|+|.+.|...
T Consensus 159 W~k~g~~l~~~~~~~~~~~~dgt~~~~s~l~v~~~~~~~~g~YtC~v~n~~l 210 (239)
T 1i1c_A 159 WKMNGQPQENYKNTPPTMDTDGSYFLYSKLNVKKETWQQGNTFTCSVLHEGL 210 (239)
T ss_dssp EEETTEECSSEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred EEECCEECCCceecCceECCCCCEEEEEEEEEChhhcCCCCEEEEEEECCCC
Confidence 9999876642110 12233333333468999999998765
No 290
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.34 E-value=6.9e-11 Score=73.52 Aligned_cols=87 Identities=29% Similarity=0.513 Sum_probs=71.2
Q ss_pred cCceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCc-c---------eeeEEEccCCC-CCCceEE
Q psy11131 53 TPYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRT-S---------STSLVINPVGR-EDRGIYQ 120 (150)
Q Consensus 53 ~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~-~---------~~~l~~~~~~~-~~~g~y~ 120 (150)
.+|.+...+....+.+|+.+.|.|.+. .| .+.+.|++++..+.... + ...|.|.++.. .|.|.|.
T Consensus 5 ~pP~~~~~p~~~~v~~G~~v~l~C~~~g~p---~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~ 81 (212)
T 2yd1_A 5 HPPEIIRKPQNQGVRVGGVASFYCAARGDP---PPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYE 81 (212)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSS---CCEEEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEE
T ss_pred CCCEEEcCCCceEEecCCEEEEEEEEccCC---CCeEEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEE
Confidence 356677778888899999999999999 88 88999999988775221 1 25799999999 9999999
Q ss_pred EEEEeCCCCceeeeEEEEEcCc
Q psy11131 121 CIARRSDGDVAQGSAELQLGGT 142 (150)
Q Consensus 121 C~~~~~~g~~~~~~~~l~v~~~ 142 (150)
|.+.|..|...+..+.|.|..+
T Consensus 82 C~~~n~~g~~~~~~~~l~V~~~ 103 (212)
T 2yd1_A 82 CVAENGVGDAVSADATLTIYEG 103 (212)
T ss_dssp EEEECSSSCEEEEEEEEEEECT
T ss_pred EEEEeCCCCeEEeeEEEEEecc
Confidence 9999988843677788888665
No 291
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.34 E-value=3e-11 Score=75.19 Aligned_cols=86 Identities=28% Similarity=0.426 Sum_probs=70.0
Q ss_pred cCceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCcc---------eeeEEEccC-CCCCCceEEE
Q psy11131 53 TPYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRTS---------STSLVINPV-GREDRGIYQC 121 (150)
Q Consensus 53 ~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~~---------~~~l~~~~~-~~~~~g~y~C 121 (150)
.+|.+...+....+.+|+.+.|.|.+. .| .+.+.|++++..+..... ...|.|.++ ..+|.|.|.|
T Consensus 5 ~~P~~~~~p~~~~v~~G~~v~L~C~~~g~p---~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C 81 (212)
T 2yd6_A 5 TPPRFTRTPVDQTGVSGGVASFICQATGDP---RPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYEC 81 (212)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEES---CCEEEEEETTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEE
T ss_pred CCCeEEeCcceeEEecCCeEEEEEEEeeCC---CCEEEEEECCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEE
Confidence 455666677778899999999999999 88 899999999887754321 356999999 5899999999
Q ss_pred EEEeCCCCceeeeEEEEEcCc
Q psy11131 122 IARRSDGDVAQGSAELQLGGT 142 (150)
Q Consensus 122 ~~~~~~g~~~~~~~~l~v~~~ 142 (150)
.+.|..| .....+.|.|..+
T Consensus 82 ~a~n~~g-~~~~~~~l~V~~~ 101 (212)
T 2yd6_A 82 VASNNVG-EISVSTRLTVLRE 101 (212)
T ss_dssp EEEETTE-EEEEEEEEEEECG
T ss_pred EEEcCCC-cEEEEEEEEEecc
Confidence 9999988 5677778887654
No 292
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=99.34 E-value=2.7e-12 Score=82.82 Aligned_cols=114 Identities=16% Similarity=0.292 Sum_probs=70.9
Q ss_pred CCceEEeC------CeEEEcCCCCCCCeEEEEEeccCC-----c---ceeEEEEEEEec----CceEE-eCCCcEEEecC
Q psy11131 9 GPRTRVLG------PILAIEGVTAEDSGTYRCSSSNIG-----G---EATAEVRLQVST----PYRVD-VNPPLLSVHLD 69 (150)
Q Consensus 9 ~~~~~~~~------~~l~i~~~~~~d~G~Y~C~~~~~~-----~---~~~~~~~l~v~~----~~~~~-~~~~~~~~~~g 69 (150)
.+|+.+.. .+|.|.+++.+|+|.|.|.+.+.. + .-...+.|.|.. +|.+. ..+. ..+..|
T Consensus 64 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~-~~~~~g 142 (263)
T 3iu4_H 64 KSRLSISKDNSKSQVFLKMNSLQTDDTAMYYCARSGVREGRAQAWFAYWGQGTLVTVSAASTKGPSVFPLAPS-SKGSTS 142 (263)
T ss_dssp TTCEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEECC---CEEEEEEECCCEEEEECSSCCBCCEEEEECCC-CCC---
T ss_pred CCCEEEEecCCCCEEEEEECCCCHHHCEEEEEEEEeCCCCccccccceeCCceEEEEecccCCCCEEEEccCc-cccccC
Confidence 46777653 349999999999999999987652 1 111234677752 23333 2222 223478
Q ss_pred CcEEEEEEec--CCCCCCcEEEEeecCcccCC-----------Ccc---eeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 70 GSANFQCEIT--PYDSGPYLIAWFKDGRQIPG-----------RTS---STSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 70 ~~~~l~C~~~--~p~~~~~~~~w~~~~~~~~~-----------~~~---~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
+.+.|.|.+. .|. .+.+.| ++..+.. +.. .+.|.+......| |.|+|.+.+..+
T Consensus 143 ~~~~L~C~~~~~~P~--~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~ 212 (263)
T 3iu4_H 143 GTAALGCLVKDYFPE--PVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPS 212 (263)
T ss_dssp -EEEEEEEEEEEBSS--CCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEETTHHHH-CCCEEEEEEGGG
T ss_pred CcEEEEEEEEeEeCC--ceEEEE--CCcccCCceeecCceECCCCCEEEEEEEEECHhHcCC-CEEEEEEEECCC
Confidence 8899999998 441 378999 3332211 011 3467777777777 999999998765
No 293
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=99.33 E-value=4.8e-11 Score=69.52 Aligned_cols=75 Identities=21% Similarity=0.352 Sum_probs=61.2
Q ss_pred ecCceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCC----------c-----------ceeeEEEc
Q psy11131 52 STPYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGR----------T-----------SSTSLVIN 109 (150)
Q Consensus 52 ~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~----------~-----------~~~~l~~~ 109 (150)
..+|.+...+....+.+|+.+.|.|.+. .| .+.+.|++++..+... . ....|.|.
T Consensus 19 ~~pP~~~~~p~~~~v~~G~~v~L~C~~~g~P---~p~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~ 95 (137)
T 3qr2_A 19 SHMAGFVQAPLSQQRWVGGSVELHCEAVGSP---VPEIQWWFEGQGPNDICSQLWDGARLDRVHIHATYHQHAASTISID 95 (137)
T ss_dssp --CCEEEECCCCEEEETTSCEEEEEEEECSS---CCEEEEEEEESSTTCCCEECCTTHHHHTEEEEEEESSSEEEEEEEC
T ss_pred CCCCeEEcCCCCEEEeCCCCEEEEEEEeeec---CCeEEEEECCCCccccceeecccCcccceEEecccccccceEEEEC
Confidence 3567777788888899999999999999 89 9999999977654321 0 14589999
Q ss_pred cCCCCCCceEEEEEEeCCCC
Q psy11131 110 PVGREDRGIYQCIARRSDGD 129 (150)
Q Consensus 110 ~~~~~~~g~y~C~~~~~~g~ 129 (150)
++..+|.|.|.|.+.|..|.
T Consensus 96 ~v~~~D~G~Y~C~a~N~~G~ 115 (137)
T 3qr2_A 96 TLVEEDTGTYECRASNDPDR 115 (137)
T ss_dssp SCCGGGCEEEEEEEECCTTS
T ss_pred CCCcccCEEEEEEEEecCCc
Confidence 99999999999999999884
No 294
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.33 E-value=1.7e-11 Score=75.23 Aligned_cols=89 Identities=19% Similarity=0.311 Sum_probs=71.2
Q ss_pred CceEEeCCCcEEEecCCcEEEEEEec--CCCCCCcEEEEeecCcccCCCcc-----------------eeeEEEccCCCC
Q psy11131 54 PYRVDVNPPLLSVHLDGSANFQCEIT--PYDSGPYLIAWFKDGRQIPGRTS-----------------STSLVINPVGRE 114 (150)
Q Consensus 54 ~~~~~~~~~~~~~~~g~~~~l~C~~~--~p~~~~~~~~w~~~~~~~~~~~~-----------------~~~l~~~~~~~~ 114 (150)
++.+...+....+.+|+.+.|.|.+. .| .+.+.|++++..+..... ...|.|.++...
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~~p---~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~ 78 (195)
T 2c5d_C 2 ESPFVGNPGNITGARGLTGTLRCQLQVQGE---PPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLS 78 (195)
T ss_dssp CCSEEECCCCEEECTTCCEEEEEEEEEESS---CCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCST
T ss_pred CCeeccChhheEEecCCcEEEecccccCCC---CcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEecccc
Confidence 34566677888899999999999997 67 789999999887765421 257999999999
Q ss_pred CCceEEEEEEeCCCCceeeeEEEEEcCcCcc
Q psy11131 115 DRGIYQCIARRSDGDVAQGSAELQLGGTRNI 145 (150)
Q Consensus 115 ~~g~y~C~~~~~~g~~~~~~~~l~v~~~p~~ 145 (150)
|.|.|.|.+.+..+...+..+.|.|..+|..
T Consensus 79 d~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~ 109 (195)
T 2c5d_C 79 DTGQYQCLVFLGHQTFVSQPGYVGLEGLPYF 109 (195)
T ss_dssp TCEEEEEEEEETTEEEECCCEEEEECCSCEE
T ss_pred CCcEEEEEEEeCCCceecccEEEEEecCCeE
Confidence 9999999999987744455588888877644
No 295
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.33 E-value=2.5e-11 Score=67.24 Aligned_cols=84 Identities=24% Similarity=0.332 Sum_probs=65.1
Q ss_pred ceEEeCCCcEEEecCCcEEEEEEecCCCCCCcEEEEeecCcccCCCcc--------eeeEEEccCCCCCCceEEEEEEeC
Q psy11131 55 YRVDVNPPLLSVHLDGSANFQCEITPYDSGPYLIAWFKDGRQIPGRTS--------STSLVINPVGREDRGIYQCIARRS 126 (150)
Q Consensus 55 ~~~~~~~~~~~~~~g~~~~l~C~~~~p~~~~~~~~w~~~~~~~~~~~~--------~~~l~~~~~~~~~~g~y~C~~~~~ 126 (150)
|.+...+....+.+|+.+.|.|....| .+.+.|++++..+....+ ...|.|.++..+|.|.|.|.
T Consensus 9 p~~~~~~~~~~v~~G~~v~l~C~~~~p---~~~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~---- 81 (103)
T 2dku_A 9 NCFTEELTNLQVEEKGTAVFTCKTEHP---AATVTWRKGLLELRASGKHQPSQEGLTLRLTISALEKADSDTYTCD---- 81 (103)
T ss_dssp CCCSSCCCCEEEETTSEEEEEEECSSC---CSCCEEEESSCBCCSSSSEEEEEETTEEEEEEESCCTTTCSEEEEE----
T ss_pred CEeEecCCcEEEeCCCcEEEEEEeCCC---CCeEEEEeCCEECCCCCeEEEEeCCCEEEEEECCCCcccCEEEEEE----
Confidence 444455667889999999999994477 789999999887765433 23799999999999999998
Q ss_pred CCCceeeeEEEEEcCcCccc
Q psy11131 127 DGDVAQGSAELQLGGTRNIK 146 (150)
Q Consensus 127 ~g~~~~~~~~l~v~~~p~~~ 146 (150)
.| .....+.|.|.+.|...
T Consensus 82 ~g-~~~~~~~l~V~~~p~~p 100 (103)
T 2dku_A 82 IG-QAQSRAQLLVQGRRSGP 100 (103)
T ss_dssp CS-SCBCCEEEEEECSCCCC
T ss_pred eC-CceEEEEEEEeCccCCC
Confidence 45 45667888888776554
No 296
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.32 E-value=1.1e-11 Score=75.30 Aligned_cols=87 Identities=21% Similarity=0.303 Sum_probs=68.8
Q ss_pred eEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCcc----------eeeEEEccCCCCCCceEEEEEE
Q psy11131 56 RVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRTS----------STSLVINPVGREDRGIYQCIAR 124 (150)
Q Consensus 56 ~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~~----------~~~l~~~~~~~~~~g~y~C~~~ 124 (150)
.+...+....+.+|+.+.|.|.+. .| .+.+.|++++..+..... ...|.|.++..+|.|.|.|.+.
T Consensus 4 ~~~~~p~~~~v~~G~~v~l~C~~~~~p---~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 80 (182)
T 1rhf_A 4 KLMGAPVKLTVSQGQPVKLNCSVEGME---EPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVE 80 (182)
T ss_dssp ---CCCEEEEEETTCCEEEEEEEESCS---SCCEEEEETTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEES
T ss_pred EEEeCCcceEEeCCCcEEEEEEEeCCC---CCeEEEEECCeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEE
Confidence 344556667889999999999999 88 889999999887765432 2579999999999999999999
Q ss_pred eCCCCceeeeEEEEEcCcCcc
Q psy11131 125 RSDGDVAQGSAELQLGGTRNI 145 (150)
Q Consensus 125 ~~~g~~~~~~~~l~v~~~p~~ 145 (150)
+..+...+..+.|.|..+|..
T Consensus 81 ~~~~~~~~~~~~l~V~~~p~~ 101 (182)
T 1rhf_A 81 DGGETEISQPVWLTVEGVPFF 101 (182)
T ss_dssp SCTTCEECCCEEEEEECSCEE
T ss_pred cCCCcEEEEEEEEEEecCCeE
Confidence 987744567788888877654
No 297
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.32 E-value=3.5e-11 Score=73.58 Aligned_cols=87 Identities=18% Similarity=0.319 Sum_probs=67.9
Q ss_pred CceEEeCCCcEEEec-CCcEEEEEEec-CCCCCC--cEEEEeecCcccCCCcc---eeeEEEccCCCCCCceEEEEEEeC
Q psy11131 54 PYRVDVNPPLLSVHL-DGSANFQCEIT-PYDSGP--YLIAWFKDGRQIPGRTS---STSLVINPVGREDRGIYQCIARRS 126 (150)
Q Consensus 54 ~~~~~~~~~~~~~~~-g~~~~l~C~~~-~p~~~~--~~~~w~~~~~~~~~~~~---~~~l~~~~~~~~~~g~y~C~~~~~ 126 (150)
+|.+.. +....+.+ |+.+.|.|.+. .| . +.+.|++++..+..... ...|.|.++..+|.|.|.|.+.|.
T Consensus 3 ~P~i~~-~~~~~v~~~G~~v~l~C~~~~~~---~~~~~v~W~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~ 78 (190)
T 2wv3_A 3 EPRIVT-SEEVIIRDSLLPVTLQCNLTSSS---HTLMYSYWTKNGVELTATRKNASNMEYRINKPRAEDSGEYHCVYHFV 78 (190)
T ss_dssp CCEEEE-CCCEECCCSSSCEEEEEEEEECS---SCEEEEEEEETTEECTTCCBCCSEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCcccc-cceEEEccCCceEEEEEEeccCC---CCceEEEEEECCEECcccceEeccEEEEEecCCcccCEEEEEEEEeC
Confidence 344444 33344555 99999999998 76 5 89999999887765432 578999999999999999999998
Q ss_pred CCCceeeeEEEEEcCcCccc
Q psy11131 127 DGDVAQGSAELQLGGTRNIK 146 (150)
Q Consensus 127 ~g~~~~~~~~l~v~~~p~~~ 146 (150)
+ .....+.|.|..+|.+.
T Consensus 79 -~-~~~~~~~l~V~~~p~~~ 96 (190)
T 2wv3_A 79 -S-APKANATIEVKAAPDIT 96 (190)
T ss_dssp -T-EEEEEEEEEEECCCEEE
T ss_pred -C-cccccEEEEEecCCccc
Confidence 6 67888888888876543
No 298
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=99.32 E-value=7.3e-12 Score=78.96 Aligned_cols=114 Identities=16% Similarity=0.213 Sum_probs=72.1
Q ss_pred CceEEeC------CeEEEcCCCCCCCeEEEEEeccCCc-------c--eeEEEEEEEec----CceEEeCCCcEEEecCC
Q psy11131 10 PRTRVLG------PILAIEGVTAEDSGTYRCSSSNIGG-------E--ATAEVRLQVST----PYRVDVNPPLLSVHLDG 70 (150)
Q Consensus 10 ~~~~~~~------~~l~i~~~~~~d~G~Y~C~~~~~~~-------~--~~~~~~l~v~~----~~~~~~~~~~~~~~~g~ 70 (150)
+|+.+.. .+|.|.+++.+|+|.|.|.+.+..+ . -...+.|.|.. +|.+...+.......|.
T Consensus 66 ~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~i~~~~~~~~~~~g~ 145 (226)
T 3mlr_H 66 GQVTMSVDKSISTAYLQWTTLQASDTGKYFCTRLYLFEGAQSSNAFDLWGQGTMILVSSGTTKGPSVFPLAPSSKSTSGG 145 (226)
T ss_dssp TTBEEEEEGGGTEEEEEESSCCGGGCEEEEEEEEEEEESSSEEEEEEEECCCEEEEECCCCCBCCEEEEEEEEECSTTSS
T ss_pred CcEEEEecCCCCEEEEEECCCCcccCEEEEEeEccCCCcccccchhhhhCCccEEeeccCCCCCCcEEEecCcccccCCC
Confidence 5776653 3499999999999999999876421 0 11224566653 22222111112234788
Q ss_pred cEEEEEEec--CCCCCCcEEEEeecCcccCC-----------Ccc---eeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 71 SANFQCEIT--PYDSGPYLIAWFKDGRQIPG-----------RTS---STSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 71 ~~~l~C~~~--~p~~~~~~~~w~~~~~~~~~-----------~~~---~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
.+.|.|.+. .|. .+.+.| ++..+.. +.. .+.|.+......| |.|.|.+.+..+
T Consensus 146 ~~~l~C~~~~~~p~--~~~v~W--~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~ 214 (226)
T 3mlr_H 146 TAALGCLVKDYFPE--PVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPS 214 (226)
T ss_dssp EEEEEEEEEEEBSS--CCEEEE--GGGTCCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGG
T ss_pred CEEEEEEEEEEECC--CeEEEE--CCccccCCeEeCCcEECCCCCEEEEEEEEECHhHcCC-CeEEEEEEECCC
Confidence 899999998 341 468999 3322211 011 3468888887778 999999998765
No 299
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=99.31 E-value=2.1e-11 Score=69.95 Aligned_cols=81 Identities=14% Similarity=0.276 Sum_probs=61.9
Q ss_pred CCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccC--------CCcc---------eeeEEEccCCCCCCceEEEE
Q psy11131 61 PPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIP--------GRTS---------STSLVINPVGREDRGIYQCI 122 (150)
Q Consensus 61 ~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~--------~~~~---------~~~l~~~~~~~~~~g~y~C~ 122 (150)
+....+.+|+.+.|.|.+. .| .+.+.|++.+..+. ...+ ...|.|.++..+|+|.|.|.
T Consensus 8 ~~~~~v~~G~~v~L~C~~~~~p---~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~ 84 (124)
T 3rbg_A 8 TETITVEEGQTLTLKCVTSLRK---NSSLQWLTPSGFTIFLNEYPVLKNSKYQLLHHSANQLSITVPNVTLQDEGVYKCL 84 (124)
T ss_dssp EEEEEEETTSCEEEEEECCCCT---TCEEEEECTTSCEEEETTEECSCSSCCEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred CccEEEcCCCCEEEEeEEeccC---CCEEEEECCCCeEEEEeccccccCCcEEEEeCCCCEEEEEECCCChHHCEEEEEE
Confidence 4456788999999999999 88 89999987544311 1111 36899999999999999999
Q ss_pred EEeCCCCceeeeEEEEEcCcCccc
Q psy11131 123 ARRSDGDVAQGSAELQLGGTRNIK 146 (150)
Q Consensus 123 ~~~~~g~~~~~~~~l~v~~~p~~~ 146 (150)
+.|. | .....+.|.|..+|...
T Consensus 85 a~n~-g-~~~~~~~l~V~~~P~~~ 106 (124)
T 3rbg_A 85 HYSD-S-VSTKEVKVIVLATMKGE 106 (124)
T ss_dssp EESS-S-EEEEEEEEEEECC----
T ss_pred EEcC-C-CCcEEEEEEEEeCCCCC
Confidence 9998 7 68888999998887643
No 300
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=99.31 E-value=3.5e-11 Score=67.23 Aligned_cols=85 Identities=20% Similarity=0.295 Sum_probs=64.0
Q ss_pred CceEEeCCCcEEEecCCcEEEEEEecCCCCCCcEEEEeecCcccCCCcc--------eeeEEEccCCCCCCceEEEEEEe
Q psy11131 54 PYRVDVNPPLLSVHLDGSANFQCEITPYDSGPYLIAWFKDGRQIPGRTS--------STSLVINPVGREDRGIYQCIARR 125 (150)
Q Consensus 54 ~~~~~~~~~~~~~~~g~~~~l~C~~~~p~~~~~~~~w~~~~~~~~~~~~--------~~~l~~~~~~~~~~g~y~C~~~~ 125 (150)
+|.+...+....+.+|+.+.|.|.+. + .+.+.|++++..+....+ ...|.|.++..+|.|.|.|.+.
T Consensus 8 pp~~~~~~~~~~v~~G~~v~l~C~~~-~---~p~v~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~- 82 (108)
T 2dm7_A 8 PARFTQDLKTKEASEGATATLQCELS-K---VAPVEWKKGPETLRDGGRYSLKQDGTRCELQIHDLSVADAGEYSCMCG- 82 (108)
T ss_dssp CCCBCSCCBCCEEETTSCEEEEEEBS-S---SCCCEEESSSSBCCSSSSCEEEEETTEEEEEESSCCTTTCSEEEEEET-
T ss_pred CCeeeecCCcEEEeCCCcEEEEEEeC-C---CCeeEEEECCEECCCCCCEEEEecCCEEEEEECCCCcccCEEEEEEEc-
Confidence 34454555667889999999999885 3 456899999887654332 2359999999999999999983
Q ss_pred CCCCceeeeEEEEEcCcCcccc
Q psy11131 126 SDGDVAQGSAELQLGGTRNIKH 147 (150)
Q Consensus 126 ~~g~~~~~~~~l~v~~~p~~~~ 147 (150)
.....+.|.|..+|+.+.
T Consensus 83 ----n~~~~~~l~V~~~p~~~~ 100 (108)
T 2dm7_A 83 ----QERTSATLTVRALPARFT 100 (108)
T ss_dssp ----TEEEEEECEEECCCSSCC
T ss_pred ----CCEEEEEEEEecCCHHHc
Confidence 356778888888766543
No 301
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.31 E-value=1.1e-12 Score=81.54 Aligned_cols=99 Identities=14% Similarity=0.247 Sum_probs=60.0
Q ss_pred CCCeEEEEEeccCCcceeEEEEE----EEecCceEEeCCCcEEEecCCcEEEEEEec--CCCCCC-cEEEEeecCcccCC
Q psy11131 27 EDSGTYRCSSSNIGGEATAEVRL----QVSTPYRVDVNPPLLSVHLDGSANFQCEIT--PYDSGP-YLIAWFKDGRQIPG 99 (150)
Q Consensus 27 ~d~G~Y~C~~~~~~~~~~~~~~l----~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~--~p~~~~-~~~~w~~~~~~~~~ 99 (150)
.|+|.|+|.+.+..+.......+ .+..+|.+...+.......|..+.|.|.+. .| . +.+.|++++..+..
T Consensus 78 ~d~g~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P---~~~~v~W~k~g~~~~~ 154 (207)
T 1l6x_A 78 LNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYP---SDIAVEWESNGQPENN 154 (207)
T ss_dssp HTTCCEEEEEECTTSSSCEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBS---SCCEEEEEETTEEECC
T ss_pred cCCceEEEEEEcCcCCcceEEEeccCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeCeEC---CCeEEEEEECCeeccC
Confidence 34999999999876654333333 233445443322211112455699999998 45 4 49999999876542
Q ss_pred Ccc-------------eeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 100 RTS-------------STSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 100 ~~~-------------~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
... ...|.+......|.|.|+|.+.|...
T Consensus 155 ~~~~~~~~~~~gt~~~~s~l~i~~~~~~~~g~YtC~a~n~~l 196 (207)
T 1l6x_A 155 YKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEAL 196 (207)
T ss_dssp EEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred ccccCceECCCCCEEEEEEEEECHHHcCCCCEEEEEEEcCCc
Confidence 110 12233444334568999999998764
No 302
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.31 E-value=1.4e-11 Score=66.93 Aligned_cols=58 Identities=22% Similarity=0.472 Sum_probs=48.0
Q ss_pred EEecCCcEEEEEEecCCCCCCcEEEEeecCcccCCCcc--------eeeEEEccCCCCCCceEEEEEEe
Q psy11131 65 SVHLDGSANFQCEITPYDSGPYLIAWFKDGRQIPGRTS--------STSLVINPVGREDRGIYQCIARR 125 (150)
Q Consensus 65 ~~~~g~~~~l~C~~~~p~~~~~~~~w~~~~~~~~~~~~--------~~~l~~~~~~~~~~g~y~C~~~~ 125 (150)
.+.+|+.+.|.|.+..| .+.+.|++++..+..... ...|.|.++..+|.|.|.|.|.|
T Consensus 17 ~~~~g~~v~l~C~v~~p---~~~v~W~k~g~~i~~~~~~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~n 82 (91)
T 2lvc_A 17 HAITSECVMLACEVDRE---DAPVRWYKDGQEVEESDFVVLENEGPHRRLVLPATQPSDGGEFQCVAGD 82 (91)
T ss_dssp ECCTTCCEEEEEECSCT---TSCCEEEETTSCCCCCSSCEEEEETTEEEEEESSCCGGGCSEEEEECSS
T ss_pred EEECCCcEEEEEEECCC---CcEEEEEECCEEeeeeeeeeEEecCCeEEEEeCCCChhhcEEEEEEEcc
Confidence 34689999999997766 678999999988865543 34799999999999999999754
No 303
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.31 E-value=1.2e-11 Score=75.63 Aligned_cols=89 Identities=20% Similarity=0.276 Sum_probs=68.9
Q ss_pred cCceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCcc-------eeeEEEccCCCCCCceEEEEEE
Q psy11131 53 TPYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRTS-------STSLVINPVGREDRGIYQCIAR 124 (150)
Q Consensus 53 ~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~~-------~~~l~~~~~~~~~~g~y~C~~~ 124 (150)
.+|.+...+....+.+|+.+.|.|.+. .| .+.+.|++++..+..... ...|.|.++...|.|.|.|.+.
T Consensus 6 ~~P~i~~~~~~~~~~~G~~v~l~C~~~~~p---~~~i~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 82 (192)
T 2iep_A 6 KAPVITTPLETVDALVEEVATFMCAVESYP---QPEISWTRNKILIKLFDTRYSIRENGQLLTILSVEDSDDGIYCCTAN 82 (192)
T ss_dssp EEEEESSCCCEEEEETTSCEEEECCEEEES---CCEEEEEETTEECCTTCTTEEEEGGGTEEEESSCCGGGCEEEEEEEE
T ss_pred CCceeecCccceeeeCCCcEEEEeeCCCCC---CCeEEEEECCEEccccCccEEEcCCccEEEEcCCCcccCeEEEEEEE
Confidence 344555556667889999999999998 88 889999999877654221 3469999999999999999999
Q ss_pred eCCCCceeeeEEEEEcCcCc
Q psy11131 125 RSDGDVAQGSAELQLGGTRN 144 (150)
Q Consensus 125 ~~~g~~~~~~~~l~v~~~p~ 144 (150)
+..|........+.|..+|.
T Consensus 83 ~~~~~~~~~~~~l~v~~~p~ 102 (192)
T 2iep_A 83 NGVGGAVESCGALQVKMKPK 102 (192)
T ss_dssp CSSSCCEEEEEEEEEEEEEE
T ss_pred cCCCceeEeEEEEEEEeCCc
Confidence 98875456666777766544
No 304
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.31 E-value=8.9e-13 Score=83.44 Aligned_cols=109 Identities=11% Similarity=0.193 Sum_probs=70.5
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEe----cCceEEe-CCCcEEEecCCcEEEEEEec-C-CCCCCcEEE
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVS----TPYRVDV-NPPLLSVHLDGSANFQCEIT-P-YDSGPYLIA 89 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~----~~~~~~~-~~~~~~~~~g~~~~l~C~~~-~-p~~~~~~~~ 89 (150)
..|.|.++..+|.|.|+|.+.+..+.......+.+. .+|.+.. .+.... ..+..+.|.|.+. . |. .+.+.
T Consensus 77 s~L~I~~~~~~D~g~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~~~~-~~~~~~~L~C~~~g~~P~--~~~v~ 153 (231)
T 2w59_A 77 SAVPVSTQDWLSGERFTCTVQHEELPLPLSKSVYRNTGPTTPPLIYPFAPHPEE-LSLSRVTLSCLVRGFRPR--DIEIR 153 (231)
T ss_dssp EEEECCHHHHHTTCCEEEEEECTTCSSCEEEEECCCCSCCBCCEEEEECCCGGG-GGSSEEEEEEEEEEEBSS--CCEEE
T ss_pred EEEEecchhccCCCEEEEEEEcCCCCCceEEEEecCCCCCcCCEEEEeCCCHHH-hccCceEEEEEEEeccCC--CcEEE
Confidence 469999999999999999999876543333333221 2343332 222111 2245699999998 3 41 37999
Q ss_pred EeecCcccCCC-------------------c-c----eeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 90 WFKDGRQIPGR-------------------T-S----STSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 90 w~~~~~~~~~~-------------------~-~----~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
|++++..+... . . .+.|.+......|.|.|.|.|.|...
T Consensus 154 W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~d~gt~~~~s~L~i~~~~~~~~g~YtC~v~n~~l 216 (231)
T 2w59_A 154 WLRDHRAVPATEFVTTAVLPEERTANGAGGDGDTFFVYSKMSVETAKWNGGTVFACMAVHEAL 216 (231)
T ss_dssp EEETTEECCGGGCEECCCEECCTTSCC---CCCCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred EEECCEECCCcccccCccccCcccccccCCCCCeEEEEEEEEEeHHHcCCCCcEEEEEEcCCC
Confidence 99988765321 1 1 23455666666679999999998765
No 305
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.30 E-value=4.7e-11 Score=78.04 Aligned_cols=87 Identities=22% Similarity=0.404 Sum_probs=71.7
Q ss_pred CceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCcc----------eeeEEEccCCCCCCceEEEE
Q psy11131 54 PYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRTS----------STSLVINPVGREDRGIYQCI 122 (150)
Q Consensus 54 ~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~~----------~~~l~~~~~~~~~~g~y~C~ 122 (150)
+|.+...+....+.+|+.+.|.|.+. .| .+.+.|++++..+..... ...|.|.++..+|.|.|.|.
T Consensus 4 ~P~~~~~p~~~~v~~G~~v~l~C~~~g~p---~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 80 (305)
T 2nzi_A 4 APHFKEELRNLNVRYQSNATLVCKVTGHP---KPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVR 80 (305)
T ss_dssp CCEEEECCCCEEECTTCCEEEEEEEECSS---CCEEEEEETTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEEE
T ss_pred CCeeeecccceEEeCCCcEEEEEEEeCCC---CCeEEEEECCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEEE
Confidence 45666677788899999999999998 88 899999999877654321 23899999999999999999
Q ss_pred EEeCCCCceeeeEEEEEcCcCc
Q psy11131 123 ARRSDGDVAQGSAELQLGGTRN 144 (150)
Q Consensus 123 ~~~~~g~~~~~~~~l~v~~~p~ 144 (150)
+.|..| ..+..+.|.|..+|.
T Consensus 81 a~n~~g-~~~~~~~l~V~~~p~ 101 (305)
T 2nzi_A 81 ATNQGG-SVSGTASLEVEVPAK 101 (305)
T ss_dssp EEETTE-EEEEEEEEEECEEEE
T ss_pred EEcCCC-CccceEEEEEecCCc
Confidence 999988 577888888876553
No 306
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.30 E-value=1.4e-11 Score=76.75 Aligned_cols=115 Identities=17% Similarity=0.217 Sum_probs=70.6
Q ss_pred CCceEEeC-------CeEEEcCCCCCCCeEEEEEeccCCc---------c--eeEEEEEEEecCceEEeCCCcEEEecCC
Q psy11131 9 GPRTRVLG-------PILAIEGVTAEDSGTYRCSSSNIGG---------E--ATAEVRLQVSTPYRVDVNPPLLSVHLDG 70 (150)
Q Consensus 9 ~~~~~~~~-------~~l~i~~~~~~d~G~Y~C~~~~~~~---------~--~~~~~~l~v~~~~~~~~~~~~~~~~~g~ 70 (150)
++|+.+.. .+|.|.+++.+|+|.|.|.+.+..+ . ....+.|.|........ +..+.+..+
T Consensus 56 ~~R~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~p~~~~~~~~~~~~~t~L~V~~~~~~~~-~P~v~~~~~- 133 (207)
T 1ypz_E 56 NGRLKSAFDSKERRYSTLHIRDAQLEDSGTYFCAADTWHISEGYELGTDKLVFGQGTQVTVEPKSQPPA-KPSVFIMKN- 133 (207)
T ss_dssp ETTEEEEECTTTCSEEEEEECSCCGGGCEEEEEEEECBCCCTTCCCCCCCCEECCCEEEEEECCCCCCC-CCEEEEEEE-
T ss_pred CCCEEEEeccCCCCEEEEEECCCCHHHCEEEEEEEecCCcccccccccceeeecCccEEEEccCCCCCC-CCeEEEeCC-
Confidence 45666652 4799999999999999999887532 1 11335777775211111 222222222
Q ss_pred cEEEEEEec--CCCCCCcEEEEeecCcccCCCc------ceeeEEEccCCC-CCCceEEEEEEeCCC
Q psy11131 71 SANFQCEIT--PYDSGPYLIAWFKDGRQIPGRT------SSTSLVINPVGR-EDRGIYQCIARRSDG 128 (150)
Q Consensus 71 ~~~l~C~~~--~p~~~~~~~~w~~~~~~~~~~~------~~~~l~~~~~~~-~~~g~y~C~~~~~~g 128 (150)
.+.|.|.+. .|. .+.+.|.++ ..+.... ....+.+..... .+.|.|.|.+.+..+
T Consensus 134 ~~~l~C~~~g~~P~--~~~v~W~~~-~~l~~~~~~~~~~~~g~y~~~~~~~~~~~~~ytC~v~~~~~ 197 (207)
T 1ypz_E 134 GTNVACLVKDFYPK--EVTISLRSS-KKIVEFDPAIVISPSGKYSAVKLGQYGDSNSVTCSVQHNSE 197 (207)
T ss_dssp TTEEEEEEEEESSS--CCEEEEECS-SEEEECCCEEEECTTSSEEEEECEEESSTTTCEEEEEETTE
T ss_pred CCeEEEEEeeEeCC--CeEEEEecC-CcccCCccceEEcCCCcEEEEEeecccCCCcEEEEEEECCc
Confidence 368999998 451 279999988 5443211 122334433333 567899999998765
No 307
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.30 E-value=6.4e-11 Score=72.47 Aligned_cols=84 Identities=25% Similarity=0.334 Sum_probs=68.0
Q ss_pred CceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCcc----------eeeEEEccCCCCCCceEEEE
Q psy11131 54 PYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRTS----------STSLVINPVGREDRGIYQCI 122 (150)
Q Consensus 54 ~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~~----------~~~l~~~~~~~~~~g~y~C~ 122 (150)
+|.+...+....+.+|+.+.|.|.+. .| .+.+.|++++..+..... ...|.|.++...|.|.|.|.
T Consensus 5 ~P~~~~~~~~~~v~~G~~v~l~C~~~~~p---~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 81 (194)
T 2a38_A 5 APTFTQPLQSVVVLEGSTATFEAHISGFP---VPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLK 81 (194)
T ss_dssp EEEEEECCCCEEEETTSCEEEEEEEEEES---CCEEEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred CCeEEccCCceEEECCCEEEEEEEEEecC---CCEEEEEECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEEE
Confidence 45556667778899999999999998 88 889999999887654421 45899999999999999999
Q ss_pred EEeCCCCceeeeEEEEEcC
Q psy11131 123 ARRSDGDVAQGSAELQLGG 141 (150)
Q Consensus 123 ~~~~~g~~~~~~~~l~v~~ 141 (150)
+.+..| .....+.+.|..
T Consensus 82 ~~n~~~-~~~~~~~l~v~~ 99 (194)
T 2a38_A 82 ATNGSG-QATSTAELLVKA 99 (194)
T ss_dssp EEETTE-EEEEEEEEEEEC
T ss_pred EEcCCc-eEeEEEEEEEcc
Confidence 999887 466666777763
No 308
>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus receptor, cell adhesion, integrin ligand, glycopr LFA-1 ligand, immunoglobulin fold; HET: NAG; 2.10A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A 1d3e_I 1d3i_I 3tcx_A
Probab=99.29 E-value=4.4e-11 Score=73.04 Aligned_cols=107 Identities=12% Similarity=0.200 Sum_probs=75.9
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCce-EEeCCCcEEEecCCcEEEEEEec--CCCCCC--cEEEEe
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYR-VDVNPPLLSVHLDGSANFQCEIT--PYDSGP--YLIAWF 91 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~-~~~~~~~~~~~~g~~~~l~C~~~--~p~~~~--~~~~w~ 91 (150)
..|.|.+++. | |.|.|.+..........+.|+|..+|. +.+.+....+.+|+.++|.|.+. .| . +.+.|+
T Consensus 50 ~~l~l~~vs~-~-g~y~C~~~c~~~~~~~~~~l~V~~~P~~v~i~~~~~~~~~G~~~tL~C~v~g~~P---~~~l~i~w~ 124 (185)
T 1iam_A 50 KVYELSNVQE-D-SQPMCYSNCPDGQSTAKTFLTVYWTPERVELAPLPSWQPVGKQLTLRCQVEGGAP---RAQLTVVLL 124 (185)
T ss_dssp EEEEEEEECS-C-BCCEEEEECSSCEEEEECEEEEEBCCSEEEECCCCSEECTTSEEEEEEEEECCBC---GGGEEEEEE
T ss_pred eEEEEEecCc-C-CEEEEEEECCCCceEEEEEEEEeCCCCCCEEccCCccccCCCcEEEEEEcCCccC---CCCcEEEEE
Confidence 4589999973 4 999999876544567788888886554 44555555688999999999998 55 4 469999
Q ss_pred ecCcccCCCc-----ceeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 92 KDGRQIPGRT-----SSTSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 92 ~~~~~~~~~~-----~~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
+++..+.... ....+.+.....+|...|.|.|.+..+
T Consensus 125 kg~~~l~~~~~~~~~~~~tl~~~~~reD~g~~~sC~A~~~l~ 166 (185)
T 1iam_A 125 RGEKELKREPAVGEPAEVTTTVLVRRDHHGAQFSCRTELDLR 166 (185)
T ss_dssp ETTEEEEEEECCTTTEEEEEEEECCSSCSSCEEEEEEEEECG
T ss_pred eCCEEcccccCCCccccEEEEEeceeccCCCeEEEEEEecCc
Confidence 9887664311 133555554444444489999998765
No 309
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.29 E-value=6.1e-11 Score=64.77 Aligned_cols=76 Identities=24% Similarity=0.408 Sum_probs=59.0
Q ss_pred EEeCCCcEEEecCCcEEEEEEecCCCCCCcEEEEeecCcccCCCcc--------eeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 57 VDVNPPLLSVHLDGSANFQCEITPYDSGPYLIAWFKDGRQIPGRTS--------STSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 57 ~~~~~~~~~~~~g~~~~l~C~~~~p~~~~~~~~w~~~~~~~~~~~~--------~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
+...+....+.+|+.+.|.|.+..| .+.+.|++++..+..... ...|.|.++..+|.|.|.|.+ |
T Consensus 11 ~~~~~~~~~v~~G~~v~l~C~~~~p---~~~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a----g 83 (95)
T 2k1m_A 11 FSKKPRSVEVAAGSPAVFEAETERA---GVKVRWQRGGSDISASNKYGLATEGTRHTLTVREVGPADQGSYAVIA----G 83 (95)
T ss_dssp CSBCCCCEEEETTSCEEEEEECSSS---SCCCEEECSSSEECSSTTCEEEEETTEEEEEESSCCTTCCSEEEEEE----T
T ss_pred eEeCCCcEEEeCCCcEEEEEEeCCC---CCeEEEEECCEECCCCCcEEEEEcCCEEEEEEcCCCcccCEEEEEEE----C
Confidence 3445567788999999999998655 778999999887654332 347999999999999999998 4
Q ss_pred CceeeeEEEEEc
Q psy11131 129 DVAQGSAELQLG 140 (150)
Q Consensus 129 ~~~~~~~~l~v~ 140 (150)
.....+.|.|.
T Consensus 84 -~~~~~~~l~V~ 94 (95)
T 2k1m_A 84 -SSKVKFDLKVI 94 (95)
T ss_dssp -TEEEEEEEEEE
T ss_pred -CceEEEEEEEe
Confidence 35566777664
No 310
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.29 E-value=1.4e-11 Score=83.26 Aligned_cols=110 Identities=14% Similarity=0.189 Sum_probs=75.4
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEE----EEecCceEEeCCCcEEEecCCcEEEEEEec-C-CCCCCcEEEE
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRL----QVSTPYRVDVNPPLLSVHLDGSANFQCEIT-P-YDSGPYLIAW 90 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l----~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~-p~~~~~~~~w 90 (150)
..|.|.++..+|.|.|+|.+.+..+.......+ .+..+|.+...+.......|+.+.|.|.+. . |. ...+.|
T Consensus 233 s~L~I~~~~~~D~g~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~--~i~v~W 310 (376)
T 2aty_A 233 SELPIMHQDWLNGKEFKCRVNSAAFPAPIEKTISKTKGRPKAPQLYTIPPPKEQMAKDKVSLTCMITDFFPE--DITVEW 310 (376)
T ss_pred EEEEechHhccCCCEEEEEEecCCCCCceEEEEcCCCCCCcCCeEEeeCCCHHHhcCCceEEEEEEEEeECC--CcEEEE
Confidence 579999999999999999999875543322233 334556665554443334588899999998 3 31 568999
Q ss_pred eecCcccCCCcc-------------eeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 91 FKDGRQIPGRTS-------------STSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 91 ~~~~~~~~~~~~-------------~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
++++..+..... .+.|.+......+.|.|+|.|.+...
T Consensus 311 ~k~g~~~~~~~~~~~~~~~dgty~~~s~L~i~~~~~~~~~~YtC~v~h~~l 361 (376)
T 2aty_A 311 QWNGQPAENYKNTQPIMNTNESYFVYSKLNVQKSNWEAGNTFTCSVLHEGL 361 (376)
T ss_pred EECCEECCCeEeCCceECCCCCEEEEEEEEEcHHHhCCCCcEEEEEEeCCC
Confidence 999876532110 24466666666678999999998754
No 311
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=99.29 E-value=2.1e-11 Score=71.76 Aligned_cols=83 Identities=17% Similarity=0.245 Sum_probs=63.5
Q ss_pred eCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEee---------cCcccCCCcc--------eeeEEEccCCCCCCceEE
Q psy11131 59 VNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFK---------DGRQIPGRTS--------STSLVINPVGREDRGIYQ 120 (150)
Q Consensus 59 ~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~---------~~~~~~~~~~--------~~~l~~~~~~~~~~g~y~ 120 (150)
..+....+.+|+.+.|.|.+. .| .+.+.|++ ++..+..... ...|.|.++...|.|.|.
T Consensus 43 ~~p~~~~v~~G~~v~L~C~~~~~~---~~~i~W~~~~~~~i~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~ 119 (145)
T 1z9m_A 43 PWTSDETVVAGGTVVLKCQVKDHE---DSSLQWSNPAQQTLYFGEKRALRDNRIQLVTSTPHELSISISNVALADEGEYT 119 (145)
T ss_dssp CBCCCEEEETTSCEEEEEECSCCT---TCCEEEECTTCCEEEETTEECSCCTTEEEEEECSSEEEEEECSCCGGGCEEEE
T ss_pred cCCceEEEEcCCCEEEEEEEcCCC---CcEEEEECCCCcEEEECCceecccCCEEEecCCCCeEEEEECCCChhhCEEEE
Confidence 445677899999999999998 77 78999983 3322221111 367999999999999999
Q ss_pred EEEEeCCCCceeeeEEEEEcCcCccc
Q psy11131 121 CIARRSDGDVAQGSAELQLGGTRNIK 146 (150)
Q Consensus 121 C~~~~~~g~~~~~~~~l~v~~~p~~~ 146 (150)
|.+.|. + .....+.|.|.++|..+
T Consensus 120 C~~~n~-~-~~~~~~~L~V~~~P~~P 143 (145)
T 1z9m_A 120 CSIFTM-P-VRTAKSLVTVLGIPQKP 143 (145)
T ss_dssp EEECSS-S-CEEEEEEEEEECCCC--
T ss_pred EEEEcC-C-CceEEEEEEEEeCCCCC
Confidence 999998 7 67888899998877543
No 312
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.29 E-value=6.6e-11 Score=74.03 Aligned_cols=86 Identities=22% Similarity=0.324 Sum_probs=71.0
Q ss_pred CceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCcceeeEEEccCCCCCCceEEEEEEeCCCCcee
Q psy11131 54 PYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQ 132 (150)
Q Consensus 54 ~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~ 132 (150)
.+.+...+....+.+|+.+.|.|.+. .| .+.+.|++++..+.... ...|.|.++...|.|.|.|.+.+..+...+
T Consensus 18 ~~~i~~~p~~~~v~~G~~v~L~C~~~~~p---~~~v~W~~~~~~~~~~~-~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~s 93 (218)
T 3k0w_A 18 GSKITVNPESKAVLAGQFVKLCCRATGHP---FVQYQWFKMNKEIPNGN-TSELIFNAVHVKDAGFYVCRVNNNFTFEFS 93 (218)
T ss_dssp -CCEEECCCCEEEETTSBEEEECEETTTT---SSEEEEEETTEECTTCC-SSEEEETTCCGGGCEEEEEEEECTTCCEEC
T ss_pred CCEEEECCCCeEEeCCCcEEEEeeecCCC---CCEEEEEECCEECCCCC-CCEEEEccCChhhCeEeEEEEEcCCCCcee
Confidence 34566677888899999999999999 88 89999999988776544 578999999999999999999998775446
Q ss_pred eeEEEEEcCcC
Q psy11131 133 GSAELQLGGTR 143 (150)
Q Consensus 133 ~~~~l~v~~~p 143 (150)
..+.+.|...+
T Consensus 94 ~~~~l~V~~~~ 104 (218)
T 3k0w_A 94 QWSQLDVCDIP 104 (218)
T ss_dssp CCEEEEEECCC
T ss_pred eEEEEEEEccC
Confidence 66777776653
No 313
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.27 E-value=7.3e-12 Score=69.25 Aligned_cols=81 Identities=22% Similarity=0.320 Sum_probs=61.0
Q ss_pred ceEEeCCCcEEEecCCcEEEEEEecCCCCCCcEEEEeecCcccCCCc----c--------eeeEEEccCCCCCCceEEEE
Q psy11131 55 YRVDVNPPLLSVHLDGSANFQCEITPYDSGPYLIAWFKDGRQIPGRT----S--------STSLVINPVGREDRGIYQCI 122 (150)
Q Consensus 55 ~~~~~~~~~~~~~~g~~~~l~C~~~~p~~~~~~~~w~~~~~~~~~~~----~--------~~~l~~~~~~~~~~g~y~C~ 122 (150)
+.+...+....+.+|+.+.|.|.+... ++.+.|++++..+.... + ...|.|.++..+|.|.|.|.
T Consensus 9 ~~~~~~~~~~~v~~G~~v~l~C~~~~~---~~~v~W~k~g~~i~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~ 85 (101)
T 2edk_A 9 VLIVTPLEDQQVFVGDRVEMAVEVSEE---GAQVMWMKNGVELTREDSFKARYRFKKDGKRHILIFSDVVQEDRGRYQVI 85 (101)
T ss_dssp CCEEECCCCEEEESSCCCBCCEEESCS---SCCCEEEESSCBCCCSCCSSCCCEEEECSSEEEEECSSCCGGGCSBEEEE
T ss_pred CEEEecCCceEEcCCCCEEEEEEEeCC---CCEEEEEECCEECCCCCCcceeEEEEECCCEEEEEECCCChhhCEEEEEE
Confidence 345555667788999999999999833 46799999988775443 1 34699999999999999999
Q ss_pred EEeCCCCceeeeEEEEEcCcC
Q psy11131 123 ARRSDGDVAQGSAELQLGGTR 143 (150)
Q Consensus 123 ~~~~~g~~~~~~~~l~v~~~p 143 (150)
+.| ....+.|.|.++|
T Consensus 86 a~n-----~~~~~~l~V~~~P 101 (101)
T 2edk_A 86 TNG-----GQCEAELIVEEKQ 101 (101)
T ss_dssp CSS-----CEECCBEEEECCC
T ss_pred EcC-----CcEEEEEEEeCCC
Confidence 875 2445566666654
No 314
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.27 E-value=1.4e-10 Score=81.36 Aligned_cols=117 Identities=17% Similarity=0.249 Sum_probs=75.9
Q ss_pred CCceEEeC------CeEEEcCCCCCCCeEEEEEeccCCc----------c---eeEEEEEEEec----CceEE-eCCCcE
Q psy11131 9 GPRTRVLG------PILAIEGVTAEDSGTYRCSSSNIGG----------E---ATAEVRLQVST----PYRVD-VNPPLL 64 (150)
Q Consensus 9 ~~~~~~~~------~~l~i~~~~~~d~G~Y~C~~~~~~~----------~---~~~~~~l~v~~----~~~~~-~~~~~~ 64 (150)
..|+.+.. .+|.|.+++.+|+|.|.|.+.+..+ . ....+.|.|.. +|.+. ..+...
T Consensus 66 ~~R~~~~~~~~~~~~sL~I~~v~~~Dsg~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~ 145 (512)
T 1zvo_C 66 RGRVTISVDTSRNQFSLNLRSMSAADTAMYYCARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAPTKAPDVFPIISGCR 145 (512)
T ss_pred CCceEEEecCCCCEEEEEECcCCHHHCEEEEEEEECCCCccccccccccccccccCceEEEecccCCcCCeEEeccCCcc
Confidence 36777652 4799999999999999999887531 1 12345777763 23332 122111
Q ss_pred EEecCCcEEEEEEec-C-CCCCCc-EEEEeecCcccCC---------Ccc---eeeEEEccCCCCCCceEEEEEEeCCCC
Q psy11131 65 SVHLDGSANFQCEIT-P-YDSGPY-LIAWFKDGRQIPG---------RTS---STSLVINPVGREDRGIYQCIARRSDGD 129 (150)
Q Consensus 65 ~~~~g~~~~l~C~~~-~-p~~~~~-~~~w~~~~~~~~~---------~~~---~~~l~~~~~~~~~~g~y~C~~~~~~g~ 129 (150)
....++.+.|.|.+. . | .+ .+.|++++..... ... .+.|.|...... .|.|+|.+.|..+.
T Consensus 146 ~~~~~~~v~L~C~~~g~~P---~p~~v~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~-~g~ytC~v~n~~~~ 221 (512)
T 1zvo_C 146 HPKDNSPVVLACLITGYHP---TSVTVTWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWR-QGEYKCVVQHTASK 221 (512)
T ss_pred cccCCCeEEEEEEEEeeec---CceEEEEEcCcccCceEecCceecCCCCEEEEEEEEEcHHHcC-CceEEEEEEeCCCC
Confidence 012467899999998 4 6 54 8999986543110 001 245777766666 89999999998873
No 315
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.26 E-value=3.9e-11 Score=73.27 Aligned_cols=87 Identities=22% Similarity=0.352 Sum_probs=67.4
Q ss_pred ceEEeCCC--cEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCcc------eeeEEEccCCCCCCceEEEEEEe
Q psy11131 55 YRVDVNPP--LLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRTS------STSLVINPVGREDRGIYQCIARR 125 (150)
Q Consensus 55 ~~~~~~~~--~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~~------~~~l~~~~~~~~~~g~y~C~~~~ 125 (150)
|.+...+. ...+.+|+.+.|.|.+. .| .+.+.|++++..+..... ...|.|.++...|.|.|.|.+.+
T Consensus 3 P~i~~~~~~~~~~v~~G~~v~l~C~~~~~p---~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~ 79 (192)
T 2va4_A 3 PAISMPQKSFNATAERGEEMTFSCRASGSP---EPAISWFRNGKLIEENEKYILKGSNTELTVRNIINSDGGPYVCRATN 79 (192)
T ss_dssp CEEECSCCEEEEETTSCCCEEEECEEECSS---CCEEEEEETTEECCCSSSEEEETTTTEEEECSCCGGGCEEEEEEEEE
T ss_pred CcccCCCCCcEEEEecCCCEEEEEeeccCC---CCeEEEEECCeEcCCCccEEEeCCeeEEEEecCChhcCcEEEEEEEc
Confidence 44444333 35567899999999999 88 889999999887765432 45799999999999999999999
Q ss_pred CCCCceeeeEEEEEcCcCcc
Q psy11131 126 SDGDVAQGSAELQLGGTRNI 145 (150)
Q Consensus 126 ~~g~~~~~~~~l~v~~~p~~ 145 (150)
..+ .....+.|.|..+|..
T Consensus 80 ~~~-~~~~~~~l~V~~~p~~ 98 (192)
T 2va4_A 80 KAG-EDEKQAFLQVFVQPHI 98 (192)
T ss_dssp TTE-EEEEEEEEEEEEEEEE
T ss_pred ccc-ccceEEEEEEEccCcc
Confidence 887 4567777777666543
No 316
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.26 E-value=2e-10 Score=70.02 Aligned_cols=84 Identities=21% Similarity=0.424 Sum_probs=66.6
Q ss_pred EeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEee-cCcccCCCcc--------eeeEEEccCCCCCCceEEEEEEeCC
Q psy11131 58 DVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFK-DGRQIPGRTS--------STSLVINPVGREDRGIYQCIARRSD 127 (150)
Q Consensus 58 ~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~-~~~~~~~~~~--------~~~l~~~~~~~~~~g~y~C~~~~~~ 127 (150)
...+....+.+|+.+.|.|.+. .| . .+.|++ ++..+..... ...|.|.++..+|.|.|.|.+.+..
T Consensus 6 ~~~~~~~~v~~G~~v~L~C~~~~~p---~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~ 81 (189)
T 2v44_A 6 TISLSKVELSVGESKFFTCTAIGEP---E-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAK 81 (189)
T ss_dssp EESCSEEEEETTCCEEEEEEEEECC---S-EEEEECTTSCBCCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECTT
T ss_pred EecCCceEEecCCcEEEEEEeecCC---e-eEEEEeCCCCccCCCceEEEECCCCeEEEEEccCCcccCeEEEEEEEeCC
Confidence 3456677889999999999999 87 6 899999 6665544332 2489999999999999999999988
Q ss_pred CCceeeeEEEEEcCcCcc
Q psy11131 128 GDVAQGSAELQLGGTRNI 145 (150)
Q Consensus 128 g~~~~~~~~l~v~~~p~~ 145 (150)
|...+..+.+.|..+|..
T Consensus 82 g~~~~~~~~l~v~~~p~~ 99 (189)
T 2v44_A 82 GQTQEATVVLEIYQKLTF 99 (189)
T ss_dssp SCEEEEEEEEEEECCCEE
T ss_pred CCcEEEEEEEEEecCCce
Confidence 854467788888776543
No 317
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.26 E-value=6.2e-12 Score=83.83 Aligned_cols=109 Identities=10% Similarity=0.248 Sum_probs=68.9
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEE------------------------EecCceEEeCCCcEEEecCCcE
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQ------------------------VSTPYRVDVNPPLLSVHLDGSA 72 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~------------------------v~~~~~~~~~~~~~~~~~g~~~ 72 (150)
+.|.|.++..+| |.|+|.+.|..+.......+. +..+|.+...+.......|..+
T Consensus 182 s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~P~v~~~~~~~~~~~~~~~ 260 (344)
T 1za6_B 182 SVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCGGGSSGGGSGGQPREPQVYTLPPSRDELTKNQV 260 (344)
T ss_dssp EEEEEETTHHHH-BCEEEEEEEGGGTEEEEEEECCCCC--------------------CCBCCEEEEECCCGGGGGSSSE
T ss_pred EEEEEcHHHcCC-CcEEEEEEeCCCCccceEeecccccccccccCCCCCCccccccCCCCcCCEEEEeCCChHhccCCcE
Confidence 478999998888 999999998766533322222 1123333322211112246679
Q ss_pred EEEEEec-C-CCCCCcEEEEeecCcccCCCcc-------------eeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 73 NFQCEIT-P-YDSGPYLIAWFKDGRQIPGRTS-------------STSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 73 ~l~C~~~-~-p~~~~~~~~w~~~~~~~~~~~~-------------~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
.|.|.+. . |. .+.+.|.+++..+..... ...|.+.....+|.|.|+|.+.+...
T Consensus 261 ~L~C~~~g~~P~--~~~v~W~k~g~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~~~~l 329 (344)
T 1za6_B 261 SLTCLVKGFYPS--DIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEAL 329 (344)
T ss_dssp EEEEEEEEEBSS--CCEEEEESSSSCCCSEEECCCEECTTSCEEEEEEEEECHHHHHTTCEEEEEEECTTS
T ss_pred EEEEEEeeEECC--CeEEEEEECCeECCCcEecceEECCCCcEEEEEEEEEChHHccCCCeEEEEEEcCCC
Confidence 9999997 4 31 368999999876642210 23345555555679999999998754
No 318
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.26 E-value=1.7e-13 Score=93.97 Aligned_cols=110 Identities=15% Similarity=0.213 Sum_probs=73.3
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEE----EEecCceEEeCCCcEEEecCCcEEEEEEec-C-CCCCCcEEEE
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRL----QVSTPYRVDVNPPLLSVHLDGSANFQCEIT-P-YDSGPYLIAW 90 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l----~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~-p~~~~~~~~w 90 (150)
+.|.|.++..+|.|.|+|.+.|..+.......+ .+..+|.+...+.......|..+.|.|.+. . |. .+.+.|
T Consensus 295 ~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~--~~~v~W 372 (434)
T 1igy_B 295 SALPIMHQDWLNGKEFKCRVNSAAFPAPIEKTISKTKGKPRAPQVYTIPPPKEQMAKDKVSLTCMITDFFPE--DITVEW 372 (434)
T ss_dssp CCEECCHHHHHHTCCCBCCBCCSSCSSCCCCCCCCCCSCCBCCCCEEECCCSSSSSSSEEEEEEEEEEEBCS--CEEEEE
T ss_pred EEEEECHHHccCCCcEEEEEECCCCCCceeEEEeccCCCCcCCEEEEECCCHHHhcCCcEEEEEEEEeeECC--CeEEEE
Confidence 569999999999999999999877654222222 233445443333221123566799999997 3 41 359999
Q ss_pred eecCcccCCCcc-------------eeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 91 FKDGRQIPGRTS-------------STSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 91 ~~~~~~~~~~~~-------------~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
++++..+..... .+.|.+.....+|.|.|+|.|.|...
T Consensus 373 ~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~~~g~YtC~a~n~~l 423 (434)
T 1igy_B 373 QSDGQAPENYKNTQPIMDTDGSYFVYSKLNVQKSNWEAGNTFTCSVLHEGL 423 (434)
T ss_dssp EETTSCCSCCEECCCCCCSSSCEEEEEEEEEEHHHHHTTCCEEEEEEETTS
T ss_pred EECCEecCCceeccceeCCCCcEEEEEEEEECchhccCCCEEEEEEEcCCC
Confidence 999887642210 23455666666679999999999765
No 319
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.25 E-value=8.2e-11 Score=72.41 Aligned_cols=83 Identities=18% Similarity=0.217 Sum_probs=63.8
Q ss_pred ceEEeCCCcEEEecCCcEEEEEEecCCCCCCcEEEEeecCcccCCC-------cceeeEEEccCCCCCCceEEEEEEeCC
Q psy11131 55 YRVDVNPPLLSVHLDGSANFQCEITPYDSGPYLIAWFKDGRQIPGR-------TSSTSLVINPVGREDRGIYQCIARRSD 127 (150)
Q Consensus 55 ~~~~~~~~~~~~~~g~~~~l~C~~~~p~~~~~~~~w~~~~~~~~~~-------~~~~~l~~~~~~~~~~g~y~C~~~~~~ 127 (150)
|.+...+.. .+.+|+.+.|.|.+..+ .+.+.|++++..+... .....|.|.++..+|+|.|.|.+.|..
T Consensus 6 P~i~~~p~~-~v~~G~~v~L~C~~~~~---~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~ 81 (196)
T 3p2t_A 6 PTLWAEPGS-VISWGNSVTIWCQGTLE---AREYRLDKEESPAPWDRQNPLEPKNKARFSIPSMTEDYAGRYRCYYRSPV 81 (196)
T ss_dssp CEEEEESCS-EEETTCCEEEEEECCTT---CCEEEEEETTSCSCSEEECCCSSSSEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred CEEEccCCC-cCCCCCcEEEEeeCCCC---CCEEEEEECCCCCcccccccccCCceEEEEeccCCcccCceEEEEEeCCC
Confidence 444444554 68899999999998755 6899999998766432 115789999999999999999999987
Q ss_pred C-CceeeeEEEEEcC
Q psy11131 128 G-DVAQGSAELQLGG 141 (150)
Q Consensus 128 g-~~~~~~~~l~v~~ 141 (150)
| ...+..+.|.|.+
T Consensus 82 g~~~~s~~~~l~V~~ 96 (196)
T 3p2t_A 82 GWSQPSDPLELVMTG 96 (196)
T ss_dssp EEBCCCCCEEEEEEC
T ss_pred cccCCCccEEEEecC
Confidence 7 2346677777764
No 320
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.25 E-value=1.9e-10 Score=70.19 Aligned_cols=88 Identities=23% Similarity=0.492 Sum_probs=67.6
Q ss_pred eEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEee-cCcccCCCcc----------eeeEEEccCCCCCCceEEEEE
Q psy11131 56 RVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFK-DGRQIPGRTS----------STSLVINPVGREDRGIYQCIA 123 (150)
Q Consensus 56 ~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~-~~~~~~~~~~----------~~~l~~~~~~~~~~g~y~C~~ 123 (150)
.+...+....+.+|+.+.|.|.+. .+. .+.+.|++ ++..+..... ...|.|.++..+|.|.|.|.+
T Consensus 4 ~v~~~p~~~~v~~G~~v~l~C~~~~~~~--~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 81 (191)
T 1epf_A 4 QVDIVPSQGEISVGESKFFLCQVAGDAK--DKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVV 81 (191)
T ss_dssp CEEEESSSEEEETTCCEEEEEEECCCSC--CCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred EEEecCCCcEEcCCCCEEEEEECCCCCC--CceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEEE
Confidence 344556677889999999999998 431 68999998 7766553211 468999999999999999999
Q ss_pred EeCCCCceeeeEEEEEcCcCcc
Q psy11131 124 RRSDGDVAQGSAELQLGGTRNI 145 (150)
Q Consensus 124 ~~~~g~~~~~~~~l~v~~~p~~ 145 (150)
.+..+...+..+.+.|..+|..
T Consensus 82 ~~~~~~~~~~~~~l~v~~~p~~ 103 (191)
T 1epf_A 82 TAEDGTQSEATVNVKIFQKLMF 103 (191)
T ss_dssp EETTTEEEEEEEEEEEECCSEE
T ss_pred EcCCCcceEEEEEEEeecCceE
Confidence 9988546677788888766543
No 321
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.23 E-value=4.1e-10 Score=63.31 Aligned_cols=83 Identities=18% Similarity=0.237 Sum_probs=65.1
Q ss_pred ceEEeCCCcEEEecCCcEEEEEEecCCCCCCcEEEEeecCcccCCCc----------c--------eeeEEEccCCCCCC
Q psy11131 55 YRVDVNPPLLSVHLDGSANFQCEITPYDSGPYLIAWFKDGRQIPGRT----------S--------STSLVINPVGREDR 116 (150)
Q Consensus 55 ~~~~~~~~~~~~~~g~~~~l~C~~~~p~~~~~~~~w~~~~~~~~~~~----------~--------~~~l~~~~~~~~~~ 116 (150)
+.+...+....+.+|+.+.|.|.+. + .+.+.|++++..+.... + ...|.|.++..+|+
T Consensus 9 ~~~~~~l~d~~v~eG~~a~f~C~vs-~---~p~v~W~knG~~l~~~~~~~~~~~~~~r~~i~~~g~~~~L~I~~v~~~D~ 84 (112)
T 2e6q_A 9 ARLVAGLEDVQVYDGEDAVFSLDLS-T---IIQGTWFLNGEELKSNEPEGQVEPGALRYRIEQKGLQHRLILHAVKHQDS 84 (112)
T ss_dssp CCEEECCCCEEEETTCEEEEEEEES-S---CCCCEEEESSCBCCSSCCCTTSCTTSCEEEECCBTTEEEEEEESCCSTTC
T ss_pred cEEecCCCCeEEcCCCcEEEEEEEC-C---CCeEEEEECCEECccCcccccccccccEEEEEeCCcEEEEEECCCCHHHC
Confidence 4455666778899999999999996 3 45688999999887664 3 23799999999999
Q ss_pred ceEEEEEEeCCCCceeeeEEEEEcCcCcc
Q psy11131 117 GIYQCIARRSDGDVAQGSAELQLGGTRNI 145 (150)
Q Consensus 117 g~y~C~~~~~~g~~~~~~~~l~v~~~p~~ 145 (150)
|.|.|...+ ....++.|.|.++|..
T Consensus 85 G~Y~~~~~~----~~~ssA~L~V~~~p~~ 109 (112)
T 2e6q_A 85 GALVGFSCP----GVQDSAALTIQESSGP 109 (112)
T ss_dssp SEEEEEEET----TEEEEEEEEEECSSCS
T ss_pred ccEEEEEEC----CeeEEEEEEEeCCCcc
Confidence 999876553 3456889999888754
No 322
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.22 E-value=7.6e-11 Score=73.46 Aligned_cols=88 Identities=25% Similarity=0.423 Sum_probs=66.5
Q ss_pred cCceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCcc--------ee----eEEEccCCCCCCceE
Q psy11131 53 TPYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRTS--------ST----SLVINPVGREDRGIY 119 (150)
Q Consensus 53 ~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~~--------~~----~l~~~~~~~~~~g~y 119 (150)
.+|.+...+....+.+|+.+.|.|.+. .| .+.+.|++++..+..... .. .+.|.++...|.|.|
T Consensus 8 ~~P~i~~~p~~~~v~~G~~v~L~C~~~g~p---~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y 84 (217)
T 2vr9_A 8 QSPRIIEHPTDLVVKKNEPATLNCKVEGKP---EPTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEY 84 (217)
T ss_dssp CCCEEEECCCCEEECTTSCEEECCEEECSS---CCEEEEEETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEE
T ss_pred CCCEEecCCCceEEeCCCcEEEEEEcCCCC---CCeEEEEECCcCccCCCccceeEEecCCceEEEEEeccCCcccCceE
Confidence 355666777778899999999999998 88 899999999887654311 11 225677889999999
Q ss_pred EEEEEeCCCCceeeeEEEEEcCcC
Q psy11131 120 QCIARRSDGDVAQGSAELQLGGTR 143 (150)
Q Consensus 120 ~C~~~~~~g~~~~~~~~l~v~~~p 143 (150)
.|.+.|..|...+..+.+.|...|
T Consensus 85 ~C~~~n~~g~~~~~~~~l~v~~~~ 108 (217)
T 2vr9_A 85 WCVAKNRVGQAVSRHASLQIAVLR 108 (217)
T ss_dssp EEEEEETTEEEECCCEEEEECEEC
T ss_pred EEEEecCCCccccccceEEEEEeC
Confidence 999999887433556677776533
No 323
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.22 E-value=5.4e-12 Score=87.05 Aligned_cols=109 Identities=12% Similarity=0.262 Sum_probs=69.5
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEe-----------------cCceE-EeCCCcEE-EecCCcEEEEEE
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVS-----------------TPYRV-DVNPPLLS-VHLDGSANFQCE 77 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~-----------------~~~~~-~~~~~~~~-~~~g~~~~l~C~ 77 (150)
..|.|.++..+| |.|+|.+.+..+.......+.+. .+|.+ ...+.... +.+|+.+.|.|.
T Consensus 194 s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~~G~~v~L~C~ 272 (457)
T 1hzh_H 194 SVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKAEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCV 272 (457)
T ss_dssp EEEEECSGGGGT-SCCEEEEEEGGGTEEEEEECCCCCSCSSCSCCSCCCCCCSSSCEEEEECCCHHHHHCTTSCCCEEEE
T ss_pred EEEEecccccCC-ceEEEEEEeCCCCcceeEEecccCCCcccccCCCCCccccCCceEEeECcCchhhcccCCceEEEEE
Confidence 479999999999 99999999976554444444432 12333 22222211 457999999999
Q ss_pred ec-CCCCCCc---EEEEeecCcccCCCcc-------eeeEEEc---cCCCCC---CceEEEEEEeCCC
Q psy11131 78 IT-PYDSGPY---LIAWFKDGRQIPGRTS-------STSLVIN---PVGRED---RGIYQCIARRSDG 128 (150)
Q Consensus 78 ~~-~p~~~~~---~~~w~~~~~~~~~~~~-------~~~l~~~---~~~~~~---~g~y~C~~~~~~g 128 (150)
+. .|. .| .+.|++++..+..... ...+.+. .+...| .|.|.|.+.|..+
T Consensus 273 ~~g~~p--~p~~~~i~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~G~Y~C~a~n~~~ 338 (457)
T 1hzh_H 273 VVDVSH--EDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKAL 338 (457)
T ss_dssp EECCCT--TCCCCEEEEEETTEEECCCEEEEEEECTTSCEEEEEEECCCHHHHHHTCCEEEEEECTTS
T ss_pred EEcccC--CCCceEEEEEeCCccccccccccceecCCCcEEEEEEEEECHHHccCCCcEEEEEeCCCC
Confidence 98 540 32 9999999876543211 1222222 123445 8999999998655
No 324
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=99.22 E-value=1.3e-12 Score=81.67 Aligned_cols=110 Identities=13% Similarity=0.280 Sum_probs=69.3
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEE---EecCceEEeCC-CcEEEecCCcEEEEEEec--CCCCCCcEEEE
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQ---VSTPYRVDVNP-PLLSVHLDGSANFQCEIT--PYDSGPYLIAW 90 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~---v~~~~~~~~~~-~~~~~~~g~~~~l~C~~~--~p~~~~~~~~w 90 (150)
..|.|.++..+|.|.|+|.+.+..+.......+. +..+|.+...+ ....+..|+.+.|.|.+. .|. .+.+.|
T Consensus 66 ~~L~I~~~~~~D~g~Y~C~~~~~~~~~~~~~~i~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~--~~~v~W 143 (214)
T 1ow0_A 66 SVLPGCAEPWNHGKTFTCTAAYPESKTPLTATLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPK--DVLVRW 143 (214)
T ss_dssp EECTTTHHHHHHTCEEEEEECCSSCSSCEEEEEECCSSCCCCEEEEECCCTTTTTSSSEEEEEEEEEEESSS--CCEEEE
T ss_pred EEEEEeHHHcCCCCeEEEEEecCCCCCceeEeeccCCCCCCCEEEecCCCHHHhccCCceEEEEEEeeeECC--CcEEEE
Confidence 5688888889999999999998765433333332 23445543322 222245688899999998 451 259999
Q ss_pred eecCcccCCCc------------c------eeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 91 FKDGRQIPGRT------------S------STSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 91 ~~~~~~~~~~~------------~------~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
++++..+.... . .+.|.+......+.|.|.|.|.|...
T Consensus 144 ~k~g~~l~~~~~~~~~~~~~~~~~dgt~~~~s~l~v~~~~~~~~~~ytC~v~n~~l 199 (214)
T 1ow0_A 144 LQGSQELPREKYLTWASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEAL 199 (214)
T ss_dssp EETTEECCGGGSEECCCEECSCSSSCCEEEEEEEEEEHHHHHHTCCEEEEEECTTC
T ss_pred EECCEECCCCceeecCCcccccCCCCcEEEEEEEEECHHHccCCCEEEEEEECCCC
Confidence 99987654321 1 11222332222347899999998764
No 325
>3u1s_H FAB PGT145 heavy chain; IGG, broadly neutralizing antibody, HIV-1 GP120, immune SYST; HET: TYS; 2.30A {Homo sapiens}
Probab=99.21 E-value=5e-11 Score=77.00 Aligned_cols=114 Identities=17% Similarity=0.268 Sum_probs=71.7
Q ss_pred CCceEEeC------CeEEEcCCCCCCCeEEEEEeccC------Cc-------------------ceeEEEEEEEec----
Q psy11131 9 GPRTRVLG------PILAIEGVTAEDSGTYRCSSSNI------GG-------------------EATAEVRLQVST---- 53 (150)
Q Consensus 9 ~~~~~~~~------~~l~i~~~~~~d~G~Y~C~~~~~------~~-------------------~~~~~~~l~v~~---- 53 (150)
.+|+.+.. .+|.|.+++.+|+|.|.|.+.+. .+ .-...+.|.|..
T Consensus 88 ~~R~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~l~V~~~~~~ 167 (267)
T 3u1s_H 88 QGRVTITRDSGASTVYMELRGLTADDTAIYYCLTGSKHRLRDYFLYNEYGPNYEEWGDYLATLDVWGHGTAVTVSSASTK 167 (267)
T ss_dssp TTTEEEEECGGGCCEEEEECSCCGGGCEEEEEEEEEEEEEEEEEECCTTSSCEEEEEEEEEEEEEECCCEEEEECCCCCB
T ss_pred CCcEEEEEcCCCCEEEEEECCCChhhCEEEEEEECcCCcccccccccccccccccccccccccceecCCeEEEecCCCCC
Confidence 36777653 34999999999999999998620 00 011134566652
Q ss_pred CceEE-eCCCcEEEecCCcEEEEEEec--CCCCCCcEEEEeecCcccCCC-----------cc---eeeEEEccCCCCCC
Q psy11131 54 PYRVD-VNPPLLSVHLDGSANFQCEIT--PYDSGPYLIAWFKDGRQIPGR-----------TS---STSLVINPVGREDR 116 (150)
Q Consensus 54 ~~~~~-~~~~~~~~~~g~~~~l~C~~~--~p~~~~~~~~w~~~~~~~~~~-----------~~---~~~l~~~~~~~~~~ 116 (150)
+|.+. ..+... ...|+.+.|.|.+. .|. ...+.| ++..+... .. .+.|.+.....+|
T Consensus 168 ~P~v~~~~~~~~-~~~g~~~~l~C~~~~~~p~--~~~v~W--~~~~~~~~~~~~~~~~~~~g~y~~~s~L~i~~~~~~~- 241 (267)
T 3u1s_H 168 GPSVFPLAPSSK-STSGGTAALGCLVKDYFPE--PVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT- 241 (267)
T ss_dssp CCEEEEECCCGG-GEETTEEEEEEEEEEEBSS--CCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGGGT-
T ss_pred CCEEEEecCCcc-cCCCCcEEEEEEEeEEECC--CeEEEE--CCcccCCCEEeCCceECCCCCEEEEEEEEECchhcCC-
Confidence 23333 233221 24688899999998 442 568999 44333210 11 3467787777778
Q ss_pred ceEEEEEEeCCC
Q psy11131 117 GIYQCIARRSDG 128 (150)
Q Consensus 117 g~y~C~~~~~~g 128 (150)
+.|+|.+.+..+
T Consensus 242 ~~ytC~v~h~~~ 253 (267)
T 3u1s_H 242 QTYICNVNHKPS 253 (267)
T ss_dssp CCCEEEEEEGGG
T ss_pred CEEEEEEEECCC
Confidence 999999998765
No 326
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.21 E-value=3.6e-10 Score=70.06 Aligned_cols=78 Identities=15% Similarity=0.298 Sum_probs=60.1
Q ss_pred EEEecCCcEEEEEEec-CCCCCCcEEEEeecC-cccCCC----cceeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEE
Q psy11131 64 LSVHLDGSANFQCEIT-PYDSGPYLIAWFKDG-RQIPGR----TSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAEL 137 (150)
Q Consensus 64 ~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~-~~~~~~----~~~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l 137 (150)
..+.+|+.+.|.|.+. .| .+.+.|.+.. ..+... .....|.|.++..+|.|.|.|.+.|..| ..+..+.|
T Consensus 11 ~~~~~G~~v~L~C~~~g~P---~p~i~W~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~-~~~~~~~l 86 (202)
T 1vca_A 11 YLAQIGDSVSLTCSTTGCE---SPFFSWRTQIDSPLNGKVTNEGTTSTLTMNPVSFGNEHSYLCTATCESR-KLEKGIQV 86 (202)
T ss_dssp EEEETTSCEEEEEEEESCS---SCEEEEEETTCCCCSSEEEEETTEEEEEESSCCGGGCSEEEEEEEETTE-EEEEEEEE
T ss_pred EEEcCCCcEEEEEeecCCC---CCeEEEECCCCCCccceEEEcCCccEEEECcCCHHHCEEEEEEEEECCc-eEeeEEEE
Confidence 3445999999999999 88 8999998732 211111 0145799999999999999999999887 57778899
Q ss_pred EEcCcCcc
Q psy11131 138 QLGGTRNI 145 (150)
Q Consensus 138 ~v~~~p~~ 145 (150)
.|..+|..
T Consensus 87 ~V~~~p~~ 94 (202)
T 1vca_A 87 EIYSFPKD 94 (202)
T ss_dssp EEEBCCSC
T ss_pred EEEeCCCC
Confidence 99877654
No 327
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.21 E-value=1.3e-10 Score=64.23 Aligned_cols=73 Identities=27% Similarity=0.538 Sum_probs=58.5
Q ss_pred cEEEecCCcEEEEEEecCCCCCCcEEEEeecCcccCCCcc--------eeeEEEccCCCCCCceEEEEEEeCCCCceeee
Q psy11131 63 LLSVHLDGSANFQCEITPYDSGPYLIAWFKDGRQIPGRTS--------STSLVINPVGREDRGIYQCIARRSDGDVAQGS 134 (150)
Q Consensus 63 ~~~~~~g~~~~l~C~~~~p~~~~~~~~w~~~~~~~~~~~~--------~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~ 134 (150)
...+.+|+.+.|.|.+..| .+.+.|++++..+..... ...|.|.++..+|.|.|.|.+. .....
T Consensus 20 ~~~v~~G~~v~L~C~~~~p---~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~-----~~~~~ 91 (102)
T 2eo1_A 20 EVQAEAGASATLSCEVAQA---QTEVTWYKDGKKLSSSSKVRVEAVGCTRRLVVQQAGQAEAGEYSCEAG-----GQQLS 91 (102)
T ss_dssp EEEEETTCCEEECCBCSCS---SSCCEEEETTEECCCCSSEEEEEETTEEEEEETTCCTTTCSCEEEEET-----TEECC
T ss_pred cEEEeCCCcEEEEEEecCC---CCceEEEECCEECCCCCCEEEEEcCCEEEEEECCCCcccCEEEEEEcC-----CCcEE
Confidence 4568899999999998766 789999999987754432 2589999999999999999984 34566
Q ss_pred EEEEEcCcC
Q psy11131 135 AELQLGGTR 143 (150)
Q Consensus 135 ~~l~v~~~p 143 (150)
+.|.|.++|
T Consensus 92 ~~l~V~~p~ 100 (102)
T 2eo1_A 92 FRLQVAGQC 100 (102)
T ss_dssp EEEEEESCC
T ss_pred EEEEEeCCC
Confidence 788887764
No 328
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.21 E-value=1.5e-10 Score=70.52 Aligned_cols=87 Identities=13% Similarity=0.248 Sum_probs=62.2
Q ss_pred ceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCc--c-----eeeEEEccCCCCCCceEEEEEEeC
Q psy11131 55 YRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRT--S-----STSLVINPVGREDRGIYQCIARRS 126 (150)
Q Consensus 55 ~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~--~-----~~~l~~~~~~~~~~g~y~C~~~~~ 126 (150)
+.+...+....+.+|+.+.|.|.+. .| .+.+.|++++..+.... + ...|.|.++...|.|.|.|.+.+.
T Consensus 3 ~~~~~~~~~~~v~~G~~v~l~C~~~~~p---~~~v~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~ 79 (189)
T 2v5t_A 3 LTFREVVSPQEFKQGEDAEVVCRVSSSP---APAVSWLYHNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVE 79 (189)
T ss_dssp CEEEECCSSEEEETTSCEEECCEEECSS---CCEEEEEC-----CBCCCTTEEECTTSCEEETTCCGGGCEEEEEEEEET
T ss_pred ceeeccCCCEEEeCCCcEEEEEEEcCCC---CCEEEEEECCccceeccCCeEEEecCCCEEEeeCCHhHCcEEEEEEEEc
Confidence 4455566778899999999999998 88 89999999877654221 1 457999999999999999999988
Q ss_pred CCC-ceeeeEEEEEcCcCc
Q psy11131 127 DGD-VAQGSAELQLGGTRN 144 (150)
Q Consensus 127 ~g~-~~~~~~~l~v~~~p~ 144 (150)
.+. .....+.+.+..+|.
T Consensus 80 ~~~~~~~~~~~l~v~~~p~ 98 (189)
T 2v5t_A 80 ARGEIDFRDIIVIVNVPPA 98 (189)
T ss_dssp TTTEEEEEEEEEEEEEEEE
T ss_pred CCCceEEEEEEEEecCCCC
Confidence 752 233455666655543
No 329
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.20 E-value=2.1e-10 Score=70.64 Aligned_cols=84 Identities=18% Similarity=0.232 Sum_probs=63.1
Q ss_pred CceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCC-------cceeeEEEccCCCCCCceEEEEEEe
Q psy11131 54 PYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGR-------TSSTSLVINPVGREDRGIYQCIARR 125 (150)
Q Consensus 54 ~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~-------~~~~~l~~~~~~~~~~g~y~C~~~~ 125 (150)
+|.+...+.. .+.+|+.+.|.|.+. .| . .+.|++++..+... .....|.|.++..+|.|.|.|.+.|
T Consensus 5 ~P~i~~~p~~-~v~~G~~v~L~C~~~~~~---~-~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 79 (196)
T 2d3v_A 5 KATLWAEPGS-VISRGNSVTIRCQGTLEA---Q-EYRLVKEGSPEPWDTQNPLEPKNKARFSIPSMTEHHAGRYRCYYYS 79 (196)
T ss_dssp BCEEEEESCS-EEETTCCEEEEEECCTTC---C-EEEEEETTCSSCSEEECCCSSTTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCEEEeCCCC-cccCCCeEEEEEeCCCCC---c-EEEEEECCCCCCcccccccCCccccEEEeccCChhHCeEEEEEEeC
Confidence 4455544543 678999999999988 65 4 99999998766421 1167899999999999999999998
Q ss_pred CCCC-ceeeeEEEEEcCc
Q psy11131 126 SDGD-VAQGSAELQLGGT 142 (150)
Q Consensus 126 ~~g~-~~~~~~~l~v~~~ 142 (150)
..|. ..+..+.|.|...
T Consensus 80 ~~g~~~~s~~~~l~V~~~ 97 (196)
T 2d3v_A 80 PAGWSEPSDPLELVVTGF 97 (196)
T ss_dssp TTEECBCCCCEEEEEECS
T ss_pred CCCcCCcCccEEEEecCC
Confidence 7762 2345677777663
No 330
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.20 E-value=1.7e-10 Score=64.16 Aligned_cols=70 Identities=21% Similarity=0.363 Sum_probs=54.4
Q ss_pred cEEEecCCcEEEEEEecCCCCCCcEEEEeecCcccCCC-cc--------eeeEEEccCCCCCCceEEEEEEeCCCCceee
Q psy11131 63 LLSVHLDGSANFQCEITPYDSGPYLIAWFKDGRQIPGR-TS--------STSLVINPVGREDRGIYQCIARRSDGDVAQG 133 (150)
Q Consensus 63 ~~~~~~g~~~~l~C~~~~p~~~~~~~~w~~~~~~~~~~-~~--------~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~ 133 (150)
...+.+|+.+.|.|.+..| .+.+.|++++..+... .. ...|.|.++..+|+|.|.|.+. ....
T Consensus 25 ~~~v~~G~~v~L~C~~~~p---~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~-----~~~~ 96 (104)
T 1pd6_A 25 AYQVSKGHKIRLTVELADH---DAEVKWLKNGQEIQMSGSKYIFESIGAKRTLTISQCSLADDAAYQCVVG-----GEKC 96 (104)
T ss_dssp EEEEETTSCEEEEEECSSS---SSCCEEEESSSEECCCSSSSEEEEETTEEEEEECSCSSSSCEEEEEEET-----TEEE
T ss_pred cEEEecCCCEEEEEEEcCC---CCEEEEEECCEECCCCCCeEEEEecCCEEEEEECCCCcccCEEEEEEEC-----CCcE
Confidence 3678999999999998756 6779999999877654 22 2389999999999999999983 2445
Q ss_pred eEEEEEc
Q psy11131 134 SAELQLG 140 (150)
Q Consensus 134 ~~~l~v~ 140 (150)
.+.|.|.
T Consensus 97 ~~~l~V~ 103 (104)
T 1pd6_A 97 STELFVK 103 (104)
T ss_dssp CCEEEEE
T ss_pred EEEEEEe
Confidence 5555553
No 331
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.20 E-value=2.2e-10 Score=77.23 Aligned_cols=81 Identities=23% Similarity=0.256 Sum_probs=65.8
Q ss_pred CCcEEEecCCcEEEEEEec-CCCCCCcEEEEeec--CcccCCC-----cc--------eeeEEEccCCCCCCceEEEEEE
Q psy11131 61 PPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKD--GRQIPGR-----TS--------STSLVINPVGREDRGIYQCIAR 124 (150)
Q Consensus 61 ~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~--~~~~~~~-----~~--------~~~l~~~~~~~~~~g~y~C~~~ 124 (150)
+....+.+|+.+.|.|.+. .| .+.+.|+++ +..+... .+ ...|.|.++..+|.|.|.|.+.
T Consensus 7 ~~~~~~~~G~~v~l~C~~~g~p---~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 83 (389)
T 2jll_A 7 LKNETTYENGQVTLVCDAEGEP---IPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAA 83 (389)
T ss_dssp CCCEEEETTSEEEEEEEEECSS---CCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEEEEEEE
T ss_pred cCceEEeCCCeEEEEEEeeccc---CCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEEEEEEEE
Confidence 4456678899999999999 88 899999998 6655431 11 3589999999999999999999
Q ss_pred eCCCCceeeeEEEEEcCcCcc
Q psy11131 125 RSDGDVAQGSAELQLGGTRNI 145 (150)
Q Consensus 125 ~~~g~~~~~~~~l~v~~~p~~ 145 (150)
|..| ..+..+.|.|..+|.+
T Consensus 84 n~~g-~~~~~~~l~V~~~P~~ 103 (389)
T 2jll_A 84 SRIG-GHQKSMYLDIEYAPKF 103 (389)
T ss_dssp CSSC-EEEEEEEEEEEEEEEE
T ss_pred eCCC-CcceEEEEEEEeCCEE
Confidence 9999 5788888888876654
No 332
>4hwn_A FC receptor-like A; FCRLA, FCRL, IG-C2 domain, IG superfamily, immune system, ST genomics, PSI-biology; 2.01A {Homo sapiens}
Probab=99.20 E-value=3.8e-11 Score=67.25 Aligned_cols=80 Identities=21% Similarity=0.418 Sum_probs=55.1
Q ss_pred EecCCcEEEEEEec-CCC--CCCcEEEEeecCcccCCCcceeeEEEccCCCCCCceEEEEEEeCCC--CceeeeEEEEEc
Q psy11131 66 VHLDGSANFQCEIT-PYD--SGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDG--DVAQGSAELQLG 140 (150)
Q Consensus 66 ~~~g~~~~l~C~~~-~p~--~~~~~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~g~y~C~~~~~~g--~~~~~~~~l~v~ 140 (150)
+.+|+.+.|.|.+. .+. .....+.|++++..+........|.|..+..+|+|.|.|.+.+..+ ...+..+.|.|.
T Consensus 19 v~~G~~VtL~C~~~~~~~~~~~~~~~~w~k~g~~l~~~~~~~~l~i~~v~~~dsG~Y~C~~~~~~~~~~~~S~~l~L~V~ 98 (108)
T 4hwn_A 19 PQAGSPMTLSCQTKLPLQRSAARLLFSFYKDGRIVQSRGLSSEFQIPTASEDHSGSYWCEAATEDNQVWKQSPQLEIRVQ 98 (108)
T ss_dssp CBTTCCEEEEEEC---------CCEEEEEETTEEEEEEESCCEEEESSCCGGGCEEEEEEEECTTSSSEEECCCEEECCB
T ss_pred CCCCCcEEEEEcccCCCCCcCcceEEEEEECCcCccCCCcccEEEeCccCcccCeEEEEEEEeCCCceeccCCCEEEEEE
Confidence 67899999999987 440 0012499999987764322257899999999999999999998754 235667888887
Q ss_pred CcCcc
Q psy11131 141 GTRNI 145 (150)
Q Consensus 141 ~~p~~ 145 (150)
++...
T Consensus 99 g~~~~ 103 (108)
T 4hwn_A 99 GASAE 103 (108)
T ss_dssp C----
T ss_pred ecchh
Confidence 76543
No 333
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.19 E-value=1.1e-10 Score=73.12 Aligned_cols=77 Identities=21% Similarity=0.405 Sum_probs=63.6
Q ss_pred CcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCcc---------eeeEEEccCCCCCCceEEEEEEeCCCCce
Q psy11131 62 PLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRTS---------STSLVINPVGREDRGIYQCIARRSDGDVA 131 (150)
Q Consensus 62 ~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~~---------~~~l~~~~~~~~~~g~y~C~~~~~~g~~~ 131 (150)
....+.+|+.+.|.|.+. .| .+.+.|++++..+..... ...|.|.++...|.|.|.|.+.|..+ ..
T Consensus 27 ~~~~v~~G~~v~L~C~~~~~p---~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~-~~ 102 (231)
T 3ojm_B 27 RLHAVPAANTVKFRCPAGGNP---MPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYG-SI 102 (231)
T ss_dssp SCEEEETTSCEEEECCEEEES---CCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTE-EE
T ss_pred eeEEEccCCCEEEEEecccCC---CCeEEEEECCccccccccccceeeecCcceEEEecCCcccCEEEEEEEecccC-cc
Confidence 567789999999999999 88 889999999877653322 34799999999999999999999888 56
Q ss_pred eeeEEEEEcCc
Q psy11131 132 QGSAELQLGGT 142 (150)
Q Consensus 132 ~~~~~l~v~~~ 142 (150)
...+.+.|...
T Consensus 103 ~~~~~l~V~~~ 113 (231)
T 3ojm_B 103 NHTYHLDVVER 113 (231)
T ss_dssp EEEEEEEEECC
T ss_pred cccEEEEEEcC
Confidence 67777777653
No 334
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.19 E-value=1.5e-10 Score=79.70 Aligned_cols=89 Identities=21% Similarity=0.355 Sum_probs=66.8
Q ss_pred CceEEeCCCcEEEecCCcEEEEEEecCCCCCCcEEEEeecCccc-CCC---cc-----eeeEEEccCCCCCCceEEEEEE
Q psy11131 54 PYRVDVNPPLLSVHLDGSANFQCEITPYDSGPYLIAWFKDGRQI-PGR---TS-----STSLVINPVGREDRGIYQCIAR 124 (150)
Q Consensus 54 ~~~~~~~~~~~~~~~g~~~~l~C~~~~p~~~~~~~~w~~~~~~~-~~~---~~-----~~~l~~~~~~~~~~g~y~C~~~ 124 (150)
+|.+...+....+.+|+.+.+.|.+..| .|.+.|++++..+ ... .+ ...|.|.++..+|+|.|+|.|.
T Consensus 341 ~P~i~~~~~~~~v~~G~~v~L~C~~~~p---~p~i~W~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 417 (440)
T 3zyj_A 341 APVIVEPPADLNVTEGMAAELKCRASTS---LTSVSWITPNGTVMTHGAYKVRIAVLSDGTLNFTNVTVQDTGMYTCMVS 417 (440)
T ss_dssp CCCEEECCCCEEECTTSCCEECCEESST---TSEEEEECTTSCEEESSSCCSSEEECTTCCEEESSCCSTTCEEEEEEEE
T ss_pred CCcccccccceeeccCceEEEEeecCCC---CCceEEEeCCCceeeccCCCceEEEccCCeEEEccCChhhCEEEEEEEE
Confidence 4556666777889999999999998766 7899999854432 111 11 4679999999999999999999
Q ss_pred eCCCCceeeeEEEEEcCcCccc
Q psy11131 125 RSDGDVAQGSAELQLGGTRNIK 146 (150)
Q Consensus 125 ~~~g~~~~~~~~l~v~~~p~~~ 146 (150)
|..| ..+.++.+.|.++|+..
T Consensus 418 N~~G-~~~~~~~~~v~~~~~~~ 438 (440)
T 3zyj_A 418 NSVG-NTTASATLNVTGTHHHH 438 (440)
T ss_dssp CSSC-EEEEEEEEEEC------
T ss_pred cCCC-cEEEEEEEEEecccccc
Confidence 9999 68889999998877643
No 335
>3bn3_B ICAM-5, intercellular adhesion molecule 5, telencephalin; I domain, integrin, allosteric mobility, cell adhesi immune system; HET: NAG; 2.10A {Homo sapiens}
Probab=99.18 E-value=8.1e-11 Score=72.42 Aligned_cols=109 Identities=8% Similarity=0.087 Sum_probs=73.9
Q ss_pred eEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCce-EEeCCCcEEEecCCcEEEEEEec--CCCCCCcEEEEeecC
Q psy11131 18 ILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYR-VDVNPPLLSVHLDGSANFQCEIT--PYDSGPYLIAWFKDG 94 (150)
Q Consensus 18 ~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~-~~~~~~~~~~~~g~~~~l~C~~~--~p~~~~~~~~w~~~~ 94 (150)
.+.|.+++ +|.+.|.|.+.-........+.|.|..+|. +.+.+....+.+|+.++|.|.+. .|. ....+.|++++
T Consensus 53 ~~~ls~vs-~d~~~~~C~~~c~~~~~~~~v~l~Vy~~P~~v~i~~~~~~~~~G~~~tL~C~v~~~~P~-~~L~i~wlkg~ 130 (196)
T 3bn3_B 53 ARQLVDIR-EPETQPVCFFRCARRTLQARGLIRTFQRPDRVELMPLPPWQPVGENFTLSCRVPGAGPR-ASLTLTLLRGA 130 (196)
T ss_dssp EEEEEEEC-SSEECCEEEEEETTEEEEEECEEEEEBCCCCCEECCCCSSEETTSEEEEEEEETTCBCG-GGEEEEEEETT
T ss_pred EEEEEEEc-cCCCceEEEEECCCCceEEEEEEEEecCCCcCEEccCCccccCCCcEEEEEEeCCccCC-CCcEEEEEeCC
Confidence 38899998 888889999776545567788888886544 33444333478999999999998 551 02458999988
Q ss_pred cccCCCc----c------eeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 95 RQIPGRT----S------STSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 95 ~~~~~~~----~------~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
..+.... . ...+.+.....++...|.|.|.+..+
T Consensus 131 ~~l~~~~~~~~~~~~~~~t~~~~~~~~r~D~g~~~sC~A~l~l~ 174 (196)
T 3bn3_B 131 QELIRRSFAGEPPRARGAVLTATVLARREDHGANFSCRAELDLR 174 (196)
T ss_dssp EEEEEEECTTSCTTCCCEEEEEEEECCGGGTTCEEEEEEEEECG
T ss_pred EEeeccccccccccccceeEEEEEeeeeccCCCeEEEEEEccCC
Confidence 7653211 0 23455554444444489999998765
No 336
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.18 E-value=1.5e-10 Score=75.64 Aligned_cols=124 Identities=11% Similarity=0.151 Sum_probs=77.8
Q ss_pred eEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCce-EEeCCCcEEEecCCcEEEEEEec--CCCCCCcEEEEeecC
Q psy11131 18 ILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYR-VDVNPPLLSVHLDGSANFQCEIT--PYDSGPYLIAWFKDG 94 (150)
Q Consensus 18 ~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~-~~~~~~~~~~~~g~~~~l~C~~~--~p~~~~~~~~w~~~~ 94 (150)
.|.|.++... |.|.|.+..........+.|.|..+|. +.+.+....+.+|+.+.|.|.+. .|.. .+.+.|++++
T Consensus 51 ~~~l~~v~~~--~~y~C~~~~~~~~~~~~v~l~V~~~P~~v~I~~~~~~~~~G~~~~LtC~v~g~~P~~-~l~itW~kg~ 127 (291)
T 1mq8_A 51 VYELSNVQED--SQPMCYSNCPDGQSTAKTFLTVYWTPERVELAPLPSWQPVGKNLTLRCQVEGGAPRA-NLTVVLLRGE 127 (291)
T ss_dssp EEEEESCCSC--CCCEEEEECSSCEEEEECEEEECBCCSCCCBCCCCSBCCSSCCCEEEEEECCCBSTT-TEEEEEESSS
T ss_pred EEEEEecccC--CeEEEEEEcCCccEEEEEEEEEecCCCCCEEecCCccccCCCCEEEEEEecCccCCC-CcEEEEEECC
Confidence 4788898754 469999875433455667888886554 22333333477899999999998 4410 2379999998
Q ss_pred cccCCCcc-----eeeEEEccCCCCCCceEEEEEEeCCCC-------ceeeeEEEEEcCcCc
Q psy11131 95 RQIPGRTS-----STSLVINPVGREDRGIYQCIARRSDGD-------VAQGSAELQLGGTRN 144 (150)
Q Consensus 95 ~~~~~~~~-----~~~l~~~~~~~~~~g~y~C~~~~~~g~-------~~~~~~~l~v~~~p~ 144 (150)
..+..... ...+.+.....++.+.|.|.|.+..+. ..+....|.|..+|+
T Consensus 128 ~~l~~~~~~~~~~~~~l~~~~~~~D~g~~~~C~A~~~l~~~g~~l~~~~s~~~~L~V~~~P~ 189 (291)
T 1mq8_A 128 KELKREPAVGEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPA 189 (291)
T ss_dssp SEEEEEECCBTTEEEEEECCCSSSCSSCEEEEEEEEECGGGTSCEEEECCCCEECBC-----
T ss_pred EEeecccCCCCCceEEEEeeeeeccCCceEEEEEEecCCccCCccccccccceEEEEEecCC
Confidence 76542221 345555555555666899999986541 134556777777753
No 337
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.17 E-value=1.4e-10 Score=71.92 Aligned_cols=88 Identities=27% Similarity=0.481 Sum_probs=65.3
Q ss_pred CceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCcc----------ee-----eEEEccCCCCCCc
Q psy11131 54 PYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRTS----------ST-----SLVINPVGREDRG 117 (150)
Q Consensus 54 ~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~~----------~~-----~l~~~~~~~~~~g 117 (150)
+|.+...+....+.+|+.+.|.|.+. .| .+.+.|++++..+..... .. .+.+.++...|.|
T Consensus 9 pp~i~~~p~~~~v~~G~~v~l~C~~~~~p---~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G 85 (212)
T 2v9r_A 9 PPRIVEHPSDLIVSKGEPATLNCKAEGRP---TPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEG 85 (212)
T ss_dssp EEEEEECCCCEEECTTCCEEECCEEEEES---CCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCE
T ss_pred CcceecCCCceEEeCCCcEEEEEEcCCCC---CCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCe
Confidence 45566677778899999999999998 88 889999998876643211 12 2344556889999
Q ss_pred eEEEEEEeCCCCceeeeEEEEEcCcCc
Q psy11131 118 IYQCIARRSDGDVAQGSAELQLGGTRN 144 (150)
Q Consensus 118 ~y~C~~~~~~g~~~~~~~~l~v~~~p~ 144 (150)
.|.|.+.+..|...+..+.+.|...|+
T Consensus 86 ~Y~C~~~n~~g~~~~~~~~l~V~~~~~ 112 (212)
T 2v9r_A 86 VYVCVARNYLGEAVSHDASLEVAILRD 112 (212)
T ss_dssp EEEEEEEETTEEEECCCEEEEECEECS
T ss_pred EEEEEEECCCCceeecceEEEEEeccc
Confidence 999999998874345667777766443
No 338
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.17 E-value=9e-10 Score=67.91 Aligned_cols=79 Identities=13% Similarity=0.193 Sum_probs=59.7
Q ss_pred CCcEEEecCCcEEEEEEec-CCCCCC-----cEEEEee-cCcccCCCcc-----------eeeEEEccCCCCCCceEEEE
Q psy11131 61 PPLLSVHLDGSANFQCEIT-PYDSGP-----YLIAWFK-DGRQIPGRTS-----------STSLVINPVGREDRGIYQCI 122 (150)
Q Consensus 61 ~~~~~~~~g~~~~l~C~~~-~p~~~~-----~~~~w~~-~~~~~~~~~~-----------~~~l~~~~~~~~~~g~y~C~ 122 (150)
+....+.+|+.+.|.|.+. .| . +.+.|++ ++.......+ ...|.|.++..+|.|.|.|.
T Consensus 9 ~~~v~v~~G~~v~L~C~~~~~p---~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 85 (202)
T 3bp6_B 9 KEVYTVDVGSSVSLECDFDRRE---CTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCL 85 (202)
T ss_dssp CSEEEEETTSCEEEEEEECTTC------CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEE
T ss_pred CcCEEEeCCCcEEEEEEecCCC---CCCccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEEEE
Confidence 3456788999999999998 76 5 8999999 3332211111 36899999999999999999
Q ss_pred EEeCCCCceeeeEEEEEcCcC
Q psy11131 123 ARRSDGDVAQGSAELQLGGTR 143 (150)
Q Consensus 123 ~~~~~g~~~~~~~~l~v~~~p 143 (150)
+.+..+ .....+.|.|..++
T Consensus 86 ~~~~~~-~~~~~~~l~V~~~~ 105 (202)
T 3bp6_B 86 VICGAA-WDYKYLTVKVKASY 105 (202)
T ss_dssp EEETTE-EEEEEEEEEEEBCC
T ss_pred EEeCCC-cceEEEEEEecCCC
Confidence 999887 46778888887653
No 339
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.16 E-value=5.8e-10 Score=68.98 Aligned_cols=86 Identities=17% Similarity=0.226 Sum_probs=66.2
Q ss_pred EEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccC------------CCcc----eeeEEEccCCCCCCceE
Q psy11131 57 VDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIP------------GRTS----STSLVINPVGREDRGIY 119 (150)
Q Consensus 57 ~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~------------~~~~----~~~l~~~~~~~~~~g~y 119 (150)
+...+....+.+|+.+.|.|.+. .| .+.+.|++++..+. ...+ ...|.|.++...|.|.|
T Consensus 4 v~~~~~~~~v~~G~~v~L~C~~~~~p---~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~v~~~D~G~Y 80 (212)
T 1f97_A 4 VYTAQSDVQVPENESIKLTCTYSGFS---SPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSSSGITFSSVTRKDNGEY 80 (212)
T ss_dssp EECSCSEEEEETTCCEEEECEEESCS---SEEEEEEEEETTEEEEEEETTEECGGGTTTEEEETTEEEESCCCGGGCEEE
T ss_pred EEecCCCeEEEcCCCEEEEeEeCCCC---CcEEEEEECCCceeeEEecCCcccccccCcEEeeceeEEEcccCcccCeEE
Confidence 34456677889999999999999 78 99999998765521 1111 46799999999999999
Q ss_pred EEEEEeCCCC-ceeeeEEEEEcCcCcc
Q psy11131 120 QCIARRSDGD-VAQGSAELQLGGTRNI 145 (150)
Q Consensus 120 ~C~~~~~~g~-~~~~~~~l~v~~~p~~ 145 (150)
.|.+.+..|. .....+.|.|..+|..
T Consensus 81 ~C~~~~~~g~~~~~~~~~l~V~~~p~~ 107 (212)
T 1f97_A 81 TCMVSEEGGQNYGEVSIHLTVLVPPSK 107 (212)
T ss_dssp EEEEEETTSSSEEEEEEEEEEEBCCCC
T ss_pred EEEEEccCCCcccEEEEEEEEEcCCCC
Confidence 9999998662 3466778888777654
No 340
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.16 E-value=2.5e-09 Score=75.03 Aligned_cols=119 Identities=13% Similarity=0.226 Sum_probs=75.4
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEE------ecCceEEeCCCcEEEecCCcEE-EEEEec--CCCCCCcE
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQV------STPYRVDVNPPLLSVHLDGSAN-FQCEIT--PYDSGPYL 87 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v------~~~~~~~~~~~~~~~~~g~~~~-l~C~~~--~p~~~~~~ 87 (150)
+.|.|.+....|.|.|+|.+.|..+... ...+.. ..+|.+...+... .|+.+. |.|.+. +|. ...
T Consensus 361 s~L~i~~~~~~d~g~y~C~a~n~~~~~~-~~~~~~~~~~~~~~~p~v~~~~~~~---~~~~~~~L~C~~~g~~P~--~i~ 434 (512)
T 1zvo_C 361 SRLTLPRSLWNAGTSVTCTLNHPSLPPQ-RLMALREPAAQAPVKLSLNLLASSD---PPEAASWLLCEVSGFSPP--NIL 434 (512)
T ss_pred EEEEEchHHhcCCCeEEEEEEeCCCCCC-ceeEEeecCCCCCCCCEEEEEccCc---CCCCceEEEEEEeeeCCC--CcE
Confidence 5699999999999999999998765432 222221 1234443332222 688899 999998 441 247
Q ss_pred EEEeecCcccCCCcc---------e-------eeEEEccCCCCCCceEEEEEEeCCCC-ceeeeEEEEEcC
Q psy11131 88 IAWFKDGRQIPGRTS---------S-------TSLVINPVGREDRGIYQCIARRSDGD-VAQGSAELQLGG 141 (150)
Q Consensus 88 ~~w~~~~~~~~~~~~---------~-------~~l~~~~~~~~~~g~y~C~~~~~~g~-~~~~~~~l~v~~ 141 (150)
+.|.+++..+..... . +.|.+.....++.|.|+|.|.+.... .......+.+..
T Consensus 435 v~W~k~g~~~~~~~~~~~~~~~~~dg~~~~~~s~L~v~~~~~~~~g~YtC~v~h~~l~~~~~~~~~~~v~~ 505 (512)
T 1zvo_C 435 LMWLEDQREVNTSGFAPARPPPQPGSTTFWAWSVLRVPAPPSPQPATYTCVVSHEDSRTLLNASRSLEVSY 505 (512)
T ss_pred EEEEECCeECcCccccccceeECCCCCEEEEEEEEEECchhcCCCCeEEEEEEecCCCCceEEEEEEEecc
Confidence 899999876643210 1 23555555556699999999987652 233444555544
No 341
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.16 E-value=5.1e-10 Score=81.47 Aligned_cols=124 Identities=20% Similarity=0.187 Sum_probs=86.0
Q ss_pred eEEEcCC-CCCCCeEEEEEeccCCcceeEE-EEEEEe---cCceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEE-E
Q psy11131 18 ILAIEGV-TAEDSGTYRCSSSNIGGEATAE-VRLQVS---TPYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIA-W 90 (150)
Q Consensus 18 ~l~i~~~-~~~d~G~Y~C~~~~~~~~~~~~-~~l~v~---~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~-w 90 (150)
.+.|..+ ....++.|.|.+.+..|..... ..+.+. .+|.+. .+....+.+|+.+.|.|.+. .| .|.+. |
T Consensus 124 ~~~i~~~~~~~~~l~~~~va~~~~G~~~~~~v~~~~~~~~~~p~~~-~~~~~~v~~G~~v~l~C~~~g~P---~p~i~~W 199 (731)
T 2v5y_A 124 ELAISTFWPNFYQVIFEVITSGHQGYLAIDEVKVLGHPCTRTPHFL-RIQNVEVNAGQFATFQCSAIGRT---VAGDRLW 199 (731)
T ss_dssp EEEECCCTTSCEEEEEEEEECSSCCEEEECCBEEESSCCSSSCEEC-CCCCEEEETTSCEEEEEEEESCC---CTTCEEE
T ss_pred EEEEeecCCCceEEEEEEEecCCceEEEEeeEEeeecccccccccc-cccceEEeCCCcEEEEEEeCCCC---CCceeEE
Confidence 4566655 2333589999887777754332 222221 344444 45567889999999999999 88 77777 7
Q ss_pred e--ecCcccCCCc--------ceeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCcCcc
Q psy11131 91 F--KDGRQIPGRT--------SSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQLGGTRNI 145 (150)
Q Consensus 91 ~--~~~~~~~~~~--------~~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p~~ 145 (150)
. +++..+.... ....|.|.++...|.|.|.|.+.|..|...+..+.|.|..+|..
T Consensus 200 ~~~~~g~~l~~~~~~~~~~~~~~~~l~I~~~~~~d~g~Y~c~A~n~~G~~~s~~~~l~V~~~P~~ 264 (731)
T 2v5y_A 200 LQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAELVVKEPPVP 264 (731)
T ss_dssp EEESSSCCEEEEEEEECCSSEEEEEEEECSCCTTTCEEEEEEEEETTEEEECCCEEEEEECCCCB
T ss_pred EecCCCccccccceEEeccccceEEEEEcccccccCeEEEEEEECCCCCcceeeEEEEEecCCCC
Confidence 7 5665543211 14689999999999999999999999843666778888776653
No 342
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.15 E-value=4.4e-10 Score=68.52 Aligned_cols=83 Identities=19% Similarity=0.195 Sum_probs=62.2
Q ss_pred cCceEEeCCCcEEEecCCcEEEEEEecCCCCCCcEEEEeecCcccCCCcceeeEEEccCCCCCCceEEEEEEeCCCC-ce
Q psy11131 53 TPYRVDVNPPLLSVHLDGSANFQCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGD-VA 131 (150)
Q Consensus 53 ~~~~~~~~~~~~~~~~g~~~~l~C~~~~p~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~g~y~C~~~~~~g~-~~ 131 (150)
.+|.+...+.. .+.+|+.+.|.|.+..+ .+.+.|++++... ......|.|.++..+|.|.|.|.+.|..|. ..
T Consensus 7 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~~---~~~~~W~k~g~~~--~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~ 80 (184)
T 2gi7_A 7 PKPSLQALPSS-LVPLEKPVTLRCQGPPG---VDLYRLEKLSSSR--YQDQAVLFIPAMKRSLAGRYRCSYQNGSLWSLP 80 (184)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECSTT---CSEEEEEETTTCC--EESSSEEEESSCCGGGCEEEEEEEEETTEEBCC
T ss_pred CCCeEEeCCCc-cccCCCcEEEEEeCCCC---CCEEEEEECCccc--cCcccEEEECcCChhhCceEEEEEEcCCCccCC
Confidence 34555555554 68899999999998755 7899999988651 112568999999999999999999997752 33
Q ss_pred eeeEEEEEcC
Q psy11131 132 QGSAELQLGG 141 (150)
Q Consensus 132 ~~~~~l~v~~ 141 (150)
+..+.|.|.+
T Consensus 81 s~~~~l~V~~ 90 (184)
T 2gi7_A 81 SDQLELVATG 90 (184)
T ss_dssp CCCEEEEEES
T ss_pred CCCEEEEecC
Confidence 5567777754
No 343
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.15 E-value=1.7e-10 Score=71.57 Aligned_cols=83 Identities=19% Similarity=0.317 Sum_probs=64.5
Q ss_pred ceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcE-EEEeecCcccCCCcceeeEEEccCCCCCCceEEEEEEeCCCCcee
Q psy11131 55 YRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYL-IAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQ 132 (150)
Q Consensus 55 ~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~-~~w~~~~~~~~~~~~~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~ 132 (150)
|.+...+....+.+|+.+.|.|.+. .| .+. +.|++++..+... ...|.|.++..+|.|.|.|.+.|. ..+
T Consensus 8 p~i~~~p~~~~v~~G~~v~L~C~~~~~p---~~~~v~W~k~g~~l~~~--~~~L~i~~v~~~D~G~Y~C~a~n~---~~s 79 (204)
T 3sgj_C 8 AVVFLEPQWYRVLEKDSVTLKCQGAYSP---EDQSTQWFHNESLISSQ--ASSYFIDAATVDDSGEYRCQTQLS---TLS 79 (204)
T ss_dssp CEEEEESCCSEEETTCCEEEEEECCSSS---SCCCEEEEETTEEESCC--SSEEEESSCCGGGCEEEEEEETTS---BCC
T ss_pred CeEEEcCCCeEEECCCCEEEEEcCCCCC---CCcEEEEEECCEEcccC--ccEEEEecccccCCEEEEEEeCCC---ccc
Confidence 4455555556789999999999998 76 554 9999999877654 378999999999999999999864 345
Q ss_pred eeEEEEEcCcCcc
Q psy11131 133 GSAELQLGGTRNI 145 (150)
Q Consensus 133 ~~~~l~v~~~p~~ 145 (150)
..+.|.|..+|..
T Consensus 80 ~~~~l~V~~~p~~ 92 (204)
T 3sgj_C 80 DPVQLEVHIGWLL 92 (204)
T ss_dssp CCEEEEEECSSEE
T ss_pred ccEEEEEecCceE
Confidence 6677777765543
No 344
>2vsd_A CHIR AB1; immune system receptor, FC receptor; HET: NAG NDG MAN; 1.82A {Gallus gallus}
Probab=99.15 E-value=5.9e-11 Score=66.12 Aligned_cols=86 Identities=17% Similarity=0.294 Sum_probs=59.4
Q ss_pred ceEEeCCCcEEEecCCcEEEEEEecCCCCCCcEEEEeecCcccCC-----CcceeeEEEccCCCCCCceEEEEEEeCC--
Q psy11131 55 YRVDVNPPLLSVHLDGSANFQCEITPYDSGPYLIAWFKDGRQIPG-----RTSSTSLVINPVGREDRGIYQCIARRSD-- 127 (150)
Q Consensus 55 ~~~~~~~~~~~~~~g~~~~l~C~~~~p~~~~~~~~w~~~~~~~~~-----~~~~~~l~~~~~~~~~~g~y~C~~~~~~-- 127 (150)
|.+...+.. .+.+|+.+.|.|.+... ...+.|++++..+.. ......|.|..+..+|+|.|.|.+.+..
T Consensus 6 P~i~~~p~~-~v~~G~~VtL~C~~~~~---~~~~~w~k~g~~~~~~~~~~~~~~~~l~I~~v~~~dsG~Y~C~~~n~~~~ 81 (105)
T 2vsd_A 6 PSLSLHPSQ-GVSLGDTVTLRCHLPRM---AAWVQLWLNGTLRFDKEKDKEQDAAEFSFAVTNLEDAGTYQCRYQVSEPL 81 (105)
T ss_dssp CEEEEESCS-SCCTTCEEEEEEECCSS---CEEEEEEETTEEEEEEEECTTCSEEEEEEECCSGGGCEEEEEEEEEETTE
T ss_pred CEEEeCCCC-CcCcCCCEEEEEEcCCC---CcEEEEEECCccceeeeccCCCCEEEEEECCCCHHHCeEEEEEEEcCCCC
Confidence 344444443 47789999999998743 567889998765421 1125789999999999999999999853
Q ss_pred -CCceeeeEEEEEcCcCc
Q psy11131 128 -GDVAQGSAELQLGGTRN 144 (150)
Q Consensus 128 -g~~~~~~~~l~v~~~p~ 144 (150)
....+..+.|.|.+...
T Consensus 82 ~~s~~Sdpl~L~V~~~~~ 99 (105)
T 2vsd_A 82 WTSNQSDPVELVLTIEGR 99 (105)
T ss_dssp EECCCCCCEEECCC----
T ss_pred cccCCCCCEEEEEEEecc
Confidence 22456778888776543
No 345
>1xau_A B- and T-lymphocyte attenuator; IG domain, beta sandwich, structural genomics, PSI, protein structure initiative; 1.80A {Mus musculus} SCOP: b.1.1.4
Probab=99.14 E-value=5.9e-10 Score=61.21 Aligned_cols=76 Identities=14% Similarity=0.243 Sum_probs=57.7
Q ss_pred cEEEecCCcEEEEEEec--CCCCCCcEEEEeecCc----ccCCC-----------c-ceeeEEEccCCCCCCceEEEEEE
Q psy11131 63 LLSVHLDGSANFQCEIT--PYDSGPYLIAWFKDGR----QIPGR-----------T-SSTSLVINPVGREDRGIYQCIAR 124 (150)
Q Consensus 63 ~~~~~~g~~~~l~C~~~--~p~~~~~~~~w~~~~~----~~~~~-----------~-~~~~l~~~~~~~~~~g~y~C~~~ 124 (150)
...+..|+.+.|.|.+. .+ .|.++|.+.+. .+... . ....|.|.++...|+|.|.|.|.
T Consensus 23 ~~tv~~G~~~~LeCpv~yc~~---rPnVtWcK~~~~~c~~L~~~~q~~~~w~e~~n~s~fiL~f~~V~~sDsG~YrCsAn 99 (122)
T 1xau_A 23 KHSAWTGELFKIECPVKYCVH---RPNVTWCKHNGTIWVPLEVGPQLYTSWEENRSVPVFVLHFKPIHLSDNGSYSCSTN 99 (122)
T ss_dssp EEEECTTSCEEEEEEEECSSS---CCCEEEEEECSSSEEECCCBTTEEEEEECSSSSCEEEEEETTCCGGGCEEEEEEEE
T ss_pred cEEEecCCeEEEEeEecCCCC---CCcEEEEecCCeeccccccceeeecceeccCCceeEEEEEeeEEEcCCccEEEEee
Confidence 35678999999999997 57 89999998542 22111 1 14589999999999999999999
Q ss_pred eCCCCceeeeEEEEEcC
Q psy11131 125 RSDGDVAQGSAELQLGG 141 (150)
Q Consensus 125 ~~~g~~~~~~~~l~v~~ 141 (150)
+..|...+....+.|.+
T Consensus 100 ~~~g~ieSHs~ti~V~~ 116 (122)
T 1xau_A 100 FNSQVINSHSVTIHVRE 116 (122)
T ss_dssp ETTEEEECCCEEEEEC-
T ss_pred CCCCceeeeEEEEEEEe
Confidence 98875556666777765
No 346
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.14 E-value=4.4e-10 Score=71.01 Aligned_cols=77 Identities=29% Similarity=0.499 Sum_probs=63.4
Q ss_pred CCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCcc---------eeeEEEccCCCCCCceEEEEEEeCCCCc
Q psy11131 61 PPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRTS---------STSLVINPVGREDRGIYQCIARRSDGDV 130 (150)
Q Consensus 61 ~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~~---------~~~l~~~~~~~~~~g~y~C~~~~~~g~~ 130 (150)
+....+.+|+.+.|.|.+. .| .+.+.|++++..+..... ...|.|.++...|.|.|.|.+.+..+ .
T Consensus 22 ~~~~~v~~G~~v~L~C~~~~~p---~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~-~ 97 (241)
T 3grw_A 22 KKLLAVPAANTVRFRCPAAGNP---TPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFG-S 97 (241)
T ss_dssp CCEEEEETTSEEEEECCEECSS---CCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTE-E
T ss_pred CcceEEcCCCeEEEEEEecCCC---CceeEEEECCcccCCCCcccceeeeccceEEEEEeCCcccCEEEEEEEeecCC-c
Confidence 3457889999999999999 88 889999999877643321 45799999999999999999999887 5
Q ss_pred eeeeEEEEEcC
Q psy11131 131 AQGSAELQLGG 141 (150)
Q Consensus 131 ~~~~~~l~v~~ 141 (150)
....+.+.|..
T Consensus 98 ~~~~~~l~V~~ 108 (241)
T 3grw_A 98 IRQTYTLDVLE 108 (241)
T ss_dssp EEEEEEEEEEC
T ss_pred eEEEEEEEEec
Confidence 66777777765
No 347
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.13 E-value=1.2e-10 Score=72.42 Aligned_cols=76 Identities=14% Similarity=0.226 Sum_probs=58.2
Q ss_pred EEEecCCcEEEEEE---ec-CCCCCCcEEEEeecCcccCCC-------------------------cceeeEEEccCCCC
Q psy11131 64 LSVHLDGSANFQCE---IT-PYDSGPYLIAWFKDGRQIPGR-------------------------TSSTSLVINPVGRE 114 (150)
Q Consensus 64 ~~~~~g~~~~l~C~---~~-~p~~~~~~~~w~~~~~~~~~~-------------------------~~~~~l~~~~~~~~ 114 (150)
+.+.+|+.+.|.|. +. .| .+.+.|++++...... .....|.|.++..+
T Consensus 3 Vta~~Ge~v~L~C~~~~v~~~p---~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~ 79 (203)
T 4fa8_A 3 VTAFLGERVTLTSYWRRVSLGP---EIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANIS 79 (203)
T ss_dssp CEEETTCCEEEEEECSSTTCST---TSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGG
T ss_pred eEEEcCCCEEEEeeeeccCCCC---CcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHH
Confidence 46789999999995 34 67 8999999876432100 00357999999999
Q ss_pred CCceEEEEEEeCCCCceeeeEEEEEcCcC
Q psy11131 115 DRGIYQCIARRSDGDVAQGSAELQLGGTR 143 (150)
Q Consensus 115 ~~g~y~C~~~~~~g~~~~~~~~l~v~~~p 143 (150)
|+|.|.|.+.|..| .....+.|.|..||
T Consensus 80 D~G~Y~C~a~n~~g-~~~~~~~l~V~~p~ 107 (203)
T 4fa8_A 80 HDGNYLCRMKLGET-EVTKQEHLSVVKPL 107 (203)
T ss_dssp GCEEEEEEEEETTE-EEEEEEEEEEEEEE
T ss_pred HCeEEEEEEEcCCC-cEEEEEEEEecCCc
Confidence 99999999999988 57777888876554
No 348
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.12 E-value=2.1e-12 Score=86.25 Aligned_cols=109 Identities=14% Similarity=0.150 Sum_probs=79.8
Q ss_pred CCeEEEEEeccCCcceeEEEEEEEecCceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCC------
Q psy11131 28 DSGTYRCSSSNIGGEATAEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGR------ 100 (150)
Q Consensus 28 d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~------ 100 (150)
+.|.|+|...+..... .+.+..+|.+...+....+.+|+.+.|.|.+. .| .+.+.|++++..+...
T Consensus 136 ~~~~~~C~~~~~l~~l----~~~~c~~P~i~~~~~~~~v~~G~~v~L~C~~~g~p---~p~i~W~~~~~~~~~~~~~~~~ 208 (347)
T 2ifg_A 136 PEQKLQCHGQGPLAHM----PNASCGVPTLKVQVPNASVDVGDDVLLRCQVEGRG---LEQAGWILTELEQSATVMKSGG 208 (347)
T ss_dssp GGGCCCCSSSSCSSCC----CCTTCCCCEEEEECCSSCCBTTCCEEEEEEEECSS---CCCCCEEESCCCSSEEECCCCC
T ss_pred cccCCCCCCChHHhcC----CcccCCCCceeccCCceEEeCCCcEEEEEEEecCC---CCEEEEEcCCceeeccccccee
Confidence 5688999776632111 12233456666666667788999999999998 88 8999999987653211
Q ss_pred cceeeEEEccCCCCCCc-eEEEEEEeCCCCceeeeEEEEEcCcCc
Q psy11131 101 TSSTSLVINPVGREDRG-IYQCIARRSDGDVAQGSAELQLGGTRN 144 (150)
Q Consensus 101 ~~~~~l~~~~~~~~~~g-~y~C~~~~~~g~~~~~~~~l~v~~~p~ 144 (150)
.....|.|.++...|.| .|.|.+.|..| ..+..+.+.|..+|.
T Consensus 209 ~~~~~L~i~~v~~~D~G~~Y~C~a~n~~g-~~~~~~~l~V~~~P~ 252 (347)
T 2ifg_A 209 LPSLGLTLANVTSDLNRKNVTCWAENDVG-RAEVSVQVNVSFPAS 252 (347)
T ss_dssp SSEEEEEEESCCSTTTTCCEEECCEETTE-ECCEEECCCCBEEEE
T ss_pred cccceEEEeeCChHHCCCeEEEEEEcCCC-CEEEEEEEEEcCCCe
Confidence 11678999999999999 99999999988 456677777766654
No 349
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.11 E-value=3.6e-10 Score=72.89 Aligned_cols=94 Identities=18% Similarity=0.267 Sum_probs=48.8
Q ss_pred CCCCCCeEEEEEeccCCcceeEEEEEEEecCceEEeCCCcEEEecCCcEEEEEEecCCCCCCcEEEEeecC--ccc----
Q psy11131 24 VTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCEITPYDSGPYLIAWFKDG--RQI---- 97 (150)
Q Consensus 24 ~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~~p~~~~~~~~w~~~~--~~~---- 97 (150)
..+.|.+.|.|.+.+..|.......+.| ...+..+.+.+|+.+.|.|....+ .+.+.|++.. ...
T Consensus 3 ~~~~~~~~y~~~~~~~~g~~~~~~~~~v------~~~p~~v~v~~G~~v~L~C~~~~~---~~~v~W~k~~~~~~~~~~~ 73 (270)
T 3qib_D 3 NERADLIAYLKQATKGGGGSGGGGGMKV------IQTPRYLVKGQGQKAKMRCIPEKG---HPVVFWYQQNKNNEFKFLI 73 (270)
T ss_dssp -------------------------CCC------EEECSEEEEETTSCEEEEEECCTT---CCEEEEEEECTTCCEEEEE
T ss_pred chhhhHHHHHHHHhccCCccccccceeE------EeCCCeEEEcCCCCEEEEEEecCC---CceEEEEEECCCCCcEEEE
Confidence 4678999999999887655443333322 334556778999999999987655 6789998721 100
Q ss_pred --------------------C-CCcceeeEEEccCCCCCCceEEEEEEeC
Q psy11131 98 --------------------P-GRTSSTSLVINPVGREDRGIYQCIARRS 126 (150)
Q Consensus 98 --------------------~-~~~~~~~l~~~~~~~~~~g~y~C~~~~~ 126 (150)
. .......|.|.++..+|+|.|.|.+.+.
T Consensus 74 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~ 123 (270)
T 3qib_D 74 NFQNQEVLQQIDMTEKRFSAECPSNSPCSLEIQSSEAGDSALYLCASSLN 123 (270)
T ss_dssp EEETTEEEEECHHHHHHEEEECCTTSCEEEEESSCCGGGCEEEEEEEESC
T ss_pred EECCCCceecCCccCCcEEEEeCCCcEEEEEECCCCHhHCeEEEEEEecC
Confidence 0 0011457999999999999999999863
No 350
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.11 E-value=2.6e-10 Score=79.12 Aligned_cols=76 Identities=21% Similarity=0.372 Sum_probs=62.3
Q ss_pred CCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCC---cc-----eeeEEEccCCCCCCceEEEEEEeCCCCce
Q psy11131 61 PPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGR---TS-----STSLVINPVGREDRGIYQCIARRSDGDVA 131 (150)
Q Consensus 61 ~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~---~~-----~~~l~~~~~~~~~~g~y~C~~~~~~g~~~ 131 (150)
+....+.+|+.+.+.|.+. .| .|.+.|++++..+... .+ ...+.|.++..+|+|.|.|.|.|..| ..
T Consensus 392 ~~~~~v~~G~~v~l~C~~~g~P---~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g-~~ 467 (477)
T 2id5_A 392 AQQVFVDEGHTVQFVCRADGDP---PPAILWLSPRKHLVSAKSNGRLTVFPDGTLEVRYAQVQDNGTYLCIAANAGG-ND 467 (477)
T ss_dssp CEEEEEETTCCEEECCCEEEES---CCEEEEECTTSCBC-------CEECTTSCEEESSCCSTTCEEEEEEEEETTE-EE
T ss_pred cccEEEeCCCeEEEEEeccccC---CCEEEEEECCccccccCCCceEEeCCCCEEEEeeCChHHCEEEEEEEEeCCC-cE
Confidence 4556789999999999999 89 9999999988765421 11 45799999999999999999999999 56
Q ss_pred eeeEEEEEc
Q psy11131 132 QGSAELQLG 140 (150)
Q Consensus 132 ~~~~~l~v~ 140 (150)
+..+.+.|.
T Consensus 468 ~~~~~l~V~ 476 (477)
T 2id5_A 468 SMPAHLHVR 476 (477)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEEe
Confidence 777777774
No 351
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.11 E-value=1.5e-09 Score=77.17 Aligned_cols=83 Identities=30% Similarity=0.434 Sum_probs=70.1
Q ss_pred CceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCcc--------eeeEEEccCCCCCCceEEEEEE
Q psy11131 54 PYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRTS--------STSLVINPVGREDRGIYQCIAR 124 (150)
Q Consensus 54 ~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~~--------~~~l~~~~~~~~~~g~y~C~~~ 124 (150)
.|.+...+....+.+|+.+.+.|.+. .| .|.+.|++++..+..... ...|.|..+..+|.|.|+|.|.
T Consensus 482 ~P~~~~~~~~~~v~~G~~~~~~~~v~g~P---~P~v~W~k~~~el~~s~~~~i~~~~~~~~L~I~~~~~~D~G~Yt~~A~ 558 (573)
T 3uto_A 482 QPRFIVKPYGTEVGEGQSANFYCRVIASS---PPVVTWHKDDRELKQSVKYMKRYNGNDYGLTINRVKGDDKGEYTVRAK 558 (573)
T ss_dssp SCEEEECCCCEEECTTSCEEEEEEEECSS---CCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEE
T ss_pred CCccccCCCCcEEeCCCcEEEEEEEEccC---CCeEEEEECCEEcccCCcEEEEEcCCEEEEEEcCCCcccCcEEEEEEE
Confidence 35555566677889999999999999 99 999999999988765544 5689999999999999999999
Q ss_pred eCCCCceeeeEEEEEc
Q psy11131 125 RSDGDVAQGSAELQLG 140 (150)
Q Consensus 125 ~~~g~~~~~~~~l~v~ 140 (150)
|..| ..+..+.|.|.
T Consensus 559 N~~G-~~~~~v~l~Vt 573 (573)
T 3uto_A 559 NSYG-TKEEIVFLNVT 573 (573)
T ss_dssp ETTE-EEEEEEEEEEC
T ss_pred eCCC-cEEEEEEEEEC
Confidence 9999 67787887763
No 352
>1pko_A Myelin oligodendrocyte glycoprotein; IGV-domain, immune system; 1.45A {Rattus norvegicus} SCOP: b.1.1.1 PDB: 1pkq_E 3csp_A 1py9_A
Probab=99.11 E-value=6.2e-09 Score=60.64 Aligned_cols=84 Identities=19% Similarity=0.335 Sum_probs=60.3
Q ss_pred CCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcc--c--------------C-CCcc-----------eeeEEEccC
Q psy11131 61 PPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQ--I--------------P-GRTS-----------STSLVINPV 111 (150)
Q Consensus 61 ~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~--~--------------~-~~~~-----------~~~l~~~~~ 111 (150)
+..+.+.+|+.+.|.|... .+....+.+.|++.+.. + . ...+ ...|.|.++
T Consensus 13 ~~~v~~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~v~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~~v 92 (139)
T 1pko_A 13 GHPIRALVGDEAELPCRISPGKNATGMEVGWYRSPFSRVVHLYRNGKDQDAEQAPEYRGRTELLKESIGEGKVALRIQNV 92 (139)
T ss_dssp SSCEEEETTSCEEEEEEEESCCCCTTSEEEEEEC--CCEEEEEETTEECGGGSCSTTTTSEEEECTTGGGTEEEEEESSC
T ss_pred CCCEEEEeCCCEEEeeEccCCCCCCceEEEEEECCCCceEEEEeCCcccccccCcccCCceEEccccccCCeEEEEEccC
Confidence 4457789999999999987 44111478999886531 0 0 0011 347999999
Q ss_pred CCCCCceEEEEEEeCCCCceeeeEEEEEcCcCcc
Q psy11131 112 GREDRGIYQCIARRSDGDVAQGSAELQLGGTRNI 145 (150)
Q Consensus 112 ~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p~~ 145 (150)
..+|+|.|.|.+.+..+ .....+.|.|.+|+..
T Consensus 93 ~~~D~G~Y~C~v~~~~~-~~~~~~~L~V~~P~~~ 125 (139)
T 1pko_A 93 RFSDEGGYTCFFRDHSY-QEEAAVELKVEDPFYW 125 (139)
T ss_dssp CGGGCEEEEEEEEETTE-EEEEEEEEEEECTTTT
T ss_pred CHHHCEEEEEEEEcCCC-ceEEEEEEEEecCcCc
Confidence 99999999999999877 5677888888865443
No 353
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.10 E-value=2.3e-10 Score=69.19 Aligned_cols=82 Identities=21% Similarity=0.298 Sum_probs=62.6
Q ss_pred CceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcE-EEEeecCcccCCCcceeeEEEccCCCCCCceEEEEEEeCCCCce
Q psy11131 54 PYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYL-IAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVA 131 (150)
Q Consensus 54 ~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~-~~w~~~~~~~~~~~~~~~l~~~~~~~~~~g~y~C~~~~~~g~~~ 131 (150)
+|.+...+....+.+|+.+.|.|.+. .| .+. +.|++++..+... ...|.|.++..+|.|.|.|.+.|..+
T Consensus 7 ~p~i~~~p~~~~v~~G~~v~L~C~~~~~p---~~~~~~W~~~~~~~~~~--~~~L~i~~~~~~d~G~Y~C~~~n~~~--- 78 (175)
T 1fnl_A 7 KAVVFLEPQWYSVLEKDSVTLKCQGAYSP---EDNSTQWFHNESLISSQ--ASSYFIDAATVNDSGEYRCQTNLSTL--- 78 (175)
T ss_dssp CCEEEEESCCSEEETTCCEEEEEECCCBT---TBCCCEEEETTEEEESS--CSEEEESSCCGGGCEEEEEECSSSCC---
T ss_pred CCEEEEcCCceeeeCCCcEEEEeeCCCCC---CCcceEEEECCEEccCC--ceEEEEeCCCcccCEEEEEEeeCCcc---
Confidence 34555556666788999999999998 66 554 7899998876543 56899999999999999999987544
Q ss_pred eeeEEEEEcCcC
Q psy11131 132 QGSAELQLGGTR 143 (150)
Q Consensus 132 ~~~~~l~v~~~p 143 (150)
+..+.+.|..++
T Consensus 79 s~~~~l~V~~~~ 90 (175)
T 1fnl_A 79 SDPVQLEVHIGW 90 (175)
T ss_dssp CCCEEEEEECSS
T ss_pred cccEEEEEeCCC
Confidence 455666666443
No 354
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.10 E-value=2.7e-09 Score=66.44 Aligned_cols=79 Identities=15% Similarity=0.214 Sum_probs=63.0
Q ss_pred EEEecCCcEEEEEEecCCCCCCc--EEEEeecCcccCCC---cceeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEE
Q psy11131 64 LSVHLDGSANFQCEITPYDSGPY--LIAWFKDGRQIPGR---TSSTSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQ 138 (150)
Q Consensus 64 ~~~~~g~~~~l~C~~~~p~~~~~--~~~w~~~~~~~~~~---~~~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~ 138 (150)
+.+..|+++.|.|.+..| .| .+.|.+.+..+... .....|.|.+++.+|.|.|.|.+.+..+ .....+.|.
T Consensus 17 v~v~~G~sv~L~C~a~~p---~P~~~i~W~~~~~~l~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~-~~~~~~~lt 92 (210)
T 1gsm_A 17 VAVALGASRQLTCRLACA---DRGASVQWRGLDTSLGAVQSDTGRSVLTVRNASLSAAGTRVCVGSCGGR-TFQHTVQLL 92 (210)
T ss_dssp EEEETTCCEEEEEEECCS---STTCEEEEESSTTTTCCEEEESSEEEEEECSCCGGGCEEEEEEEEETTE-EEEEEEEEE
T ss_pred eEEeCCCCEEEEEECCCC---CCCcceEEeecccccCcEEecCCccEEEECccCcccCceEEEEEEeCCC-ceEEEEEEE
Confidence 678899999999999744 44 99999865444211 1156899999999999999999999877 577889999
Q ss_pred EcCcCccc
Q psy11131 139 LGGTRNIK 146 (150)
Q Consensus 139 v~~~p~~~ 146 (150)
|..+|..+
T Consensus 93 V~~~P~~~ 100 (210)
T 1gsm_A 93 VYAFPNQL 100 (210)
T ss_dssp EEBCCSEE
T ss_pred EEecCCCc
Confidence 99887543
No 355
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.10 E-value=3.7e-10 Score=69.56 Aligned_cols=83 Identities=14% Similarity=0.256 Sum_probs=61.9
Q ss_pred CceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCC-------cceeeEEEccCCCCCCceEEEEEEe
Q psy11131 54 PYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGR-------TSSTSLVINPVGREDRGIYQCIARR 125 (150)
Q Consensus 54 ~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~-------~~~~~l~~~~~~~~~~g~y~C~~~~ 125 (150)
+|.+...+. ..+.+|+.+.|.|.+. .| . .+.|++++..+... .....|.|.++...|.|.|.|.+.|
T Consensus 5 ~P~i~~~p~-~~v~~G~~v~L~C~~~~~~---~-~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 79 (198)
T 1ugn_A 5 KPTLWAEPG-SVITQGSPVTLRCQGGQET---Q-EYRLYREKKTAPWITRIPQELVKKGQFPIPSITWEHTGRYRCYYGS 79 (198)
T ss_dssp CCEEEEESC-SEEETTCCEEEEEECCTTC---C-CEEEEESSSCCHHHHTSCHHHHTTTEEEESSCCGGGCEEEEEEEEE
T ss_pred CCeEeccCC-CcccCCCcEEEEEEecCCC---c-EEEEEECCccccccccccccCCcccEEEECCCCHHHCeEEEEEEEC
Confidence 344544444 3678999999999998 65 4 69999988765311 0156899999999999999999999
Q ss_pred CC-C-CceeeeEEEEEcC
Q psy11131 126 SD-G-DVAQGSAELQLGG 141 (150)
Q Consensus 126 ~~-g-~~~~~~~~l~v~~ 141 (150)
.. | ...+..+.|.|.+
T Consensus 80 ~~~g~~~~s~~~~l~V~~ 97 (198)
T 1ugn_A 80 DTAGRSESSDPLELVVTG 97 (198)
T ss_dssp TTTEECCCCCCEEEEEEC
T ss_pred CCCCcccCCccEEEEEcc
Confidence 76 4 1345667888876
No 356
>2qsq_A Carcinoembryonic antigen-related cell adhesion MO; glycoprotein, GPI-anchor, immunoglobulin DOMA lipoprotein, membrane; 1.95A {Homo sapiens} PDB: 2qst_A 2ver_N* 2gk2_A
Probab=99.09 E-value=1.2e-09 Score=61.36 Aligned_cols=75 Identities=16% Similarity=0.169 Sum_probs=56.2
Q ss_pred EEecCCcEEEEEEec-CCCCCCcEEEEeecCcccC-------------------CCcc-----eeeEEEccCCCCCCceE
Q psy11131 65 SVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIP-------------------GRTS-----STSLVINPVGREDRGIY 119 (150)
Q Consensus 65 ~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~-------------------~~~~-----~~~l~~~~~~~~~~g~y 119 (150)
.+.+|+.+.|.|... .+ ...+.|++...... ...+ +.+|.|.+++.+|.|.|
T Consensus 11 ~~~~G~~v~L~~~~~p~~---~~~i~W~kg~~~~~~~~I~~y~~~~~~~~~~~~~~gR~~~~~ngSL~I~nvt~~D~G~Y 87 (111)
T 2qsq_A 11 NVAEGKEVLLLVHNLPQH---LFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIYPNASLLIQNIIQNDAGFY 87 (111)
T ss_dssp EEETTSCEEEEEESCCSS---EEEEEEEESSSCCGGGEEEEEETTTTEEEECTTCCSCEEECTTSCEEECSCCGGGCEEE
T ss_pred eeccCCCEEEEEeCCCCC---ceEEEEEeCCCCCCCcEEEEEECCCcceecCcccCCcEEEecCCcEEEccCcccCCeEE
Confidence 678999999999864 44 56799988643210 0111 57899999999999999
Q ss_pred EEEEEeCCCCceeeeEEEEEcCc
Q psy11131 120 QCIARRSDGDVAQGSAELQLGGT 142 (150)
Q Consensus 120 ~C~~~~~~g~~~~~~~~l~v~~~ 142 (150)
+|.+.+..+.....++.|.|..+
T Consensus 88 tc~v~~~~~~~~~~~~~L~V~~~ 110 (111)
T 2qsq_A 88 TLHVIKSDLVNEEATGQFRVYPE 110 (111)
T ss_dssp EEEEEETTSCCEEEEEEEEEECC
T ss_pred EEEEEeCCCcEEEEEEEEEEecC
Confidence 99999986644667788877653
No 357
>4gos_A V-SET domain-containing T-cell activation inhibit; immunoglobulin domain, glycoprotein, disulfide bond, immunit adaptive immunity; HET: NAG BMA MAN; 1.59A {Homo sapiens}
Probab=99.09 E-value=7.5e-10 Score=63.55 Aligned_cols=77 Identities=21% Similarity=0.350 Sum_probs=55.0
Q ss_pred CcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCccc-----------CC------Ccc-----------eeeEEEccCC
Q psy11131 62 PLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQI-----------PG------RTS-----------STSLVINPVG 112 (150)
Q Consensus 62 ~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~-----------~~------~~~-----------~~~l~~~~~~ 112 (150)
......+|+++.|.|... .+......+.|++.+... .. ..+ ...|.|.++.
T Consensus 13 ~~v~g~vG~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~R~~~~~~~~~~g~~sL~I~~v~ 92 (125)
T 4gos_A 13 VASAGNIGEDGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLKNVQ 92 (125)
T ss_dssp ECEEEETTSCEEEEEEECCCSCGGGCEEEEEETTCSSBSEEEETTEECCTTBCGGGTTCEEECTTTGGGTBCCEEESSCC
T ss_pred ceEEEeCCCCEEEEEEEcCCcccCcEEEEEEEeccCceEEEEEeecccccccCccccceEEEecCCccCCeEEEEECCCC
Confidence 345678899999999986 331113479998754210 00 000 3479999999
Q ss_pred CCCCceEEEEEEeCCCCceeeeEEEEE
Q psy11131 113 REDRGIYQCIARRSDGDVAQGSAELQL 139 (150)
Q Consensus 113 ~~~~g~y~C~~~~~~g~~~~~~~~l~v 139 (150)
.+|+|.|.|.+.+..| ....++.|+|
T Consensus 93 ~~D~G~Y~C~v~~~~g-~~~~~v~LkV 118 (125)
T 4gos_A 93 LTDAGTYKCYIITSKG-KGNANLEYKT 118 (125)
T ss_dssp GGGCEEEEEEEEETTE-EEEEEEEEEE
T ss_pred hHHCEEEEEEEEeCCC-eEEEEEEEEE
Confidence 9999999999999888 5777777776
No 358
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.08 E-value=1.5e-09 Score=66.33 Aligned_cols=83 Identities=14% Similarity=0.123 Sum_probs=60.7
Q ss_pred ceEEeCCCcEEEecCCcEEEEEEecCCCCCCcEEEEeecCcccCC-------CcceeeEEEccCCCCCCceEEEEEEeCC
Q psy11131 55 YRVDVNPPLLSVHLDGSANFQCEITPYDSGPYLIAWFKDGRQIPG-------RTSSTSLVINPVGREDRGIYQCIARRSD 127 (150)
Q Consensus 55 ~~~~~~~~~~~~~~g~~~~l~C~~~~p~~~~~~~~w~~~~~~~~~-------~~~~~~l~~~~~~~~~~g~y~C~~~~~~ 127 (150)
|.+...+.. .+.+|+.+.|.|.+..+ .+.+.|++++..+.. ......|.|.++...|+|.|.|.+.+..
T Consensus 5 P~i~~~p~~-~v~~G~~v~L~C~~~~~---~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~ 80 (188)
T 1oll_A 5 PFIWAEPHF-MVPKEKQVTICCQGNYG---AVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVGE 80 (188)
T ss_dssp CEEEEESCS-EEETTCCEEEEEECCTT---CCEEEEEETTEEEEEECCSSCTTCCEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred CEEEeecCC-cCCCCCCEEEEEecCCC---CCEEEEEECCCcccccccccCCCcceeEEEeCcCCcccCeEEEEEecCCC
Confidence 444444544 68899999999998644 578999998865431 1115789999999999999999999865
Q ss_pred CC-ceeeeEEEEEcC
Q psy11131 128 GD-VAQGSAELQLGG 141 (150)
Q Consensus 128 g~-~~~~~~~l~v~~ 141 (150)
+. ..+..+.|.|.+
T Consensus 81 ~~~~~s~~~~l~V~~ 95 (188)
T 1oll_A 81 LWSEPSNLLDLVVTE 95 (188)
T ss_dssp EECCCCCCEEEEEES
T ss_pred CCCCCCCceEEEecc
Confidence 42 235667777764
No 359
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.07 E-value=7.8e-10 Score=68.26 Aligned_cols=87 Identities=17% Similarity=0.311 Sum_probs=65.3
Q ss_pred eEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCccc------------CCCcc----eeeEEEccCCCCCCce
Q psy11131 56 RVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQI------------PGRTS----STSLVINPVGREDRGI 118 (150)
Q Consensus 56 ~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~------------~~~~~----~~~l~~~~~~~~~~g~ 118 (150)
.+...+....+.+|+.+.|.|.+. .| .+.+.|++++..+ ....+ ...|.|.++...|.|.
T Consensus 6 ~i~~~~~~~~v~~G~~v~L~C~~~~~p---~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~~~~~d~G~ 82 (209)
T 1nbq_A 6 TVHSSEPEVRIPENNPVKLSCAYSGFS---SPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLPTGITFKSVTREDTGT 82 (209)
T ss_dssp EEECSCSBCCEETTCCCEEECEEESCS---SEEEEEEEEETTEEEESEETTEECTTTTTTCEEETTEEECSCCCTTSCSE
T ss_pred EEEcCCCceEEEcCCCEEEEEEEeCCC---CcEEEEEEcCCceeEEEEecCccCccccCceEeeccEEEEeeCCHHHCcE
Confidence 444556667788999999999999 88 9999999876542 11111 3679999999999999
Q ss_pred EEEEEEeCCCC-ceeeeEEEEEcCcCcc
Q psy11131 119 YQCIARRSDGD-VAQGSAELQLGGTRNI 145 (150)
Q Consensus 119 y~C~~~~~~g~-~~~~~~~l~v~~~p~~ 145 (150)
|.|.+.+..|. ..+..+.|.|..+|..
T Consensus 83 Y~C~~~~~~g~~~~~~~~~l~V~~~p~~ 110 (209)
T 1nbq_A 83 YTCMVSEEGGNSYGEVKVKLIVLVPPSK 110 (209)
T ss_dssp EEEEEEETTSSCEECCEEECCEEBCCCC
T ss_pred EEEEEecCCCCccceEEEEEEEecCCcC
Confidence 99999998652 3455677777766654
No 360
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.07 E-value=1.1e-09 Score=68.61 Aligned_cols=84 Identities=23% Similarity=0.281 Sum_probs=61.6
Q ss_pred CceEEeCCCcEEEecCCcEEEEEEecCCCCCCcEEEEeecCcccCCC-------ccee--eEEEccCCCCCCceEEEEEE
Q psy11131 54 PYRVDVNPPLLSVHLDGSANFQCEITPYDSGPYLIAWFKDGRQIPGR-------TSST--SLVINPVGREDRGIYQCIAR 124 (150)
Q Consensus 54 ~~~~~~~~~~~~~~~g~~~~l~C~~~~p~~~~~~~~w~~~~~~~~~~-------~~~~--~l~~~~~~~~~~g~y~C~~~ 124 (150)
+|.+...+. ..+.+|+.+.|.|.+..+ .+.+.|++++..+... .... .|.|.++..+|+|.|.|.+.
T Consensus 9 ~P~i~~~p~-~~v~~G~~vtL~C~~~~~---~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 84 (218)
T 1uct_A 9 MPFISAKSS-PVIPLDGSVKIQCQAIRE---AYLTQLMIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYR 84 (218)
T ss_dssp CCCEEESSC-SEEETTCCEEEEECCCTT---CSEEEEEEEETTEEEECSEECC----CCCEEEECSCCGGGCEEEEEEEE
T ss_pred CCEEEecCC-CccCCCCCEEEEEEcCCC---CCEEEEEECCCcccccccccCCCCcceeeEEEEcccccccCEEEEEEEE
Confidence 455555555 468899999999998755 7899999987654311 1134 89999999999999999999
Q ss_pred eCCCC-ceeeeEEEEEcC
Q psy11131 125 RSDGD-VAQGSAELQLGG 141 (150)
Q Consensus 125 ~~~g~-~~~~~~~l~v~~ 141 (150)
|..+. ..+..+.|.|.+
T Consensus 85 n~~~~~~~s~~~~l~V~~ 102 (218)
T 1uct_A 85 IGHYRFRYSDTLELVVTG 102 (218)
T ss_dssp ETTTEEEECCCEEEEEEC
T ss_pred cCCCceeecCCEEEEEcC
Confidence 97652 234567777765
No 361
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.07 E-value=1.7e-10 Score=69.77 Aligned_cols=81 Identities=21% Similarity=0.374 Sum_probs=60.6
Q ss_pred cCceEEeCCCcEEEecCCcEEEEEEec-CCCCCCc-EEEEeecCcccCCCcceeeEEEccCCCCCCceEEEEEEeCCCCc
Q psy11131 53 TPYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPY-LIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDV 130 (150)
Q Consensus 53 ~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~-~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~g~y~C~~~~~~g~~ 130 (150)
.+|.+...+....+.+|+.+.|.|.+. .+ .+ .+.|++++..+... ...|.|.++..+|.|.|.|.+.+..+
T Consensus 3 ~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~---~~~~i~W~~~~~~~~~~--~~~L~i~~v~~~d~G~Y~C~~~~~~~-- 75 (176)
T 1f2q_A 3 QKPKVSLNPPWNRIFKGENVTLTCNGNNFF---EVSSTKWFHNGSLSEET--NSSLNIVNAKFEDSGEYKCQHQQVNE-- 75 (176)
T ss_dssp -CCCCEEESSCSEEETTCCEEEECCTTCC-------CCEEEETTEECSCC--SSEEEECSCCGGGCEEEEEECTTSSC--
T ss_pred CCCEEEcCCCCcceecCCcEEEEEeCCCCC---CcceEEEEECCeECCCC--ceEEEEeccceecCEEEEEEcCCccc--
Confidence 345555566666789999999999998 66 53 69999998877644 57899999999999999999987554
Q ss_pred eeeeEEEEEcC
Q psy11131 131 AQGSAELQLGG 141 (150)
Q Consensus 131 ~~~~~~l~v~~ 141 (150)
+..+.+.|..
T Consensus 76 -s~~~~l~V~~ 85 (176)
T 1f2q_A 76 -SEPVYLEVFS 85 (176)
T ss_dssp -CCCEEEEEEC
T ss_pred -cccEEEEEeC
Confidence 3455666653
No 362
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.06 E-value=3.7e-10 Score=77.99 Aligned_cols=85 Identities=18% Similarity=0.286 Sum_probs=63.4
Q ss_pred ceEEeCCCcEEEecCCcEEEEEEecCCCCCCcEEEEeecCcc-cCCCc---c-----eeeEEEccCCCCCCceEEEEEEe
Q psy11131 55 YRVDVNPPLLSVHLDGSANFQCEITPYDSGPYLIAWFKDGRQ-IPGRT---S-----STSLVINPVGREDRGIYQCIARR 125 (150)
Q Consensus 55 ~~~~~~~~~~~~~~g~~~~l~C~~~~p~~~~~~~~w~~~~~~-~~~~~---~-----~~~l~~~~~~~~~~g~y~C~~~~ 125 (150)
|.+...+....+.+|+.+.+.|.+. | .|.+.|.+++.. +.... + ...|.|.++..+|+|.|+|.|.|
T Consensus 353 P~i~~~~~~~~v~~G~~~~l~C~~~-p---~p~i~W~~~~~~~~~~~~~~~~~~~~~~g~L~i~~v~~~D~G~Y~C~a~N 428 (452)
T 3zyi_A 353 PFIMDAPRDLNISEGRMAELKCRTP-P---MSSVKWLLPNGTVLSHASRHPRISVLNDGTLNFSHVLLSDTGVYTCMVTN 428 (452)
T ss_dssp CCCSBCCCCEECCTTSCCEECCBCC-T---TSEEEEECTTSCEECSSCCCSSCEECTTSCEECSSCCTTCCEEEEEEEEC
T ss_pred cccccccccccccCCCEEEEEEeCC-C---CCcEEEEeCCCcEeccCCCCCCEEECCCCeEEEeecCHHHCEEEEEEEEc
Confidence 3444455667889999999999997 8 899999985433 22110 1 46799999999999999999999
Q ss_pred CCCCceeeeEEEEEcCcCc
Q psy11131 126 SDGDVAQGSAELQLGGTRN 144 (150)
Q Consensus 126 ~~g~~~~~~~~l~v~~~p~ 144 (150)
..| ....++.+.|.+.+.
T Consensus 429 ~~G-~~~~~~~l~v~~~~~ 446 (452)
T 3zyi_A 429 VAG-NSNASAYLNVSTAGT 446 (452)
T ss_dssp SSC-EEEEEEEEEC-----
T ss_pred CCC-cEEEEEEEEEEcccc
Confidence 999 688888888877654
No 363
>1hxm_A Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.06 E-value=1.4e-09 Score=68.82 Aligned_cols=114 Identities=18% Similarity=0.263 Sum_probs=68.8
Q ss_pred CCceEEeC------CeEEEcCCCCCCCeEEEEEeccCC------cc--eeEEEEEEEecCceEEeCCCcEEEecCCcEEE
Q psy11131 9 GPRTRVLG------PILAIEGVTAEDSGTYRCSSSNIG------GE--ATAEVRLQVSTPYRVDVNPPLLSVHLDGSANF 74 (150)
Q Consensus 9 ~~~~~~~~------~~l~i~~~~~~d~G~Y~C~~~~~~------~~--~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l 74 (150)
..|+.+.. .+|.|.++..+|+|.|.|.+.+.. +. -...+.|.|.........| .+.+... ...|
T Consensus 61 ~~R~~~~~~~~~~~~sL~I~~v~~~Dsg~Y~C~~~~~~~~~~~~~~~~~g~gt~L~V~~~~~~~~~P-~v~~~~~-~~~L 138 (229)
T 1hxm_A 61 KDNFQGDIDIAKNLAVLKILAPSERDEGSYYCACDTLGMGGEYTDKLIFGKGTRVTVEPRSQPHTKP-SVFVMKN-GTNV 138 (229)
T ss_dssp TTTEEEEEEGGGTEEEEEESSCCGGGCEEEEEEEECCCCSSSCCCCCEEBCCEEEEEECCSCCCBCC-EEEEEEE-TTEE
T ss_pred CCeEEEEEcCCCCEEEEEECcCCHhHCeEEEEEEecCCCcccccchhhcCccEEEEEeccCCCCcCC-cEEEcCC-CCeE
Confidence 46777752 479999999999999999987652 11 1123577776421111112 2222222 2488
Q ss_pred EEEec--CCCCCC-cEEEEeecCcccCCCcc------eeeEEEccCCC-CCCceEEEEEEeCCC
Q psy11131 75 QCEIT--PYDSGP-YLIAWFKDGRQIPGRTS------STSLVINPVGR-EDRGIYQCIARRSDG 128 (150)
Q Consensus 75 ~C~~~--~p~~~~-~~~~w~~~~~~~~~~~~------~~~l~~~~~~~-~~~g~y~C~~~~~~g 128 (150)
.|.+. .| . ..+.|.++ ..+..... ...+.+..... .+.+.|.|.+.+..+
T Consensus 139 ~C~~~g~~P---~~i~v~W~~~-~~~~~~~~~~~~~~dg~y~~~~~~~~~~~~~ytC~V~h~~~ 198 (229)
T 1hxm_A 139 ACLVKEFYP---KDIRINLVSS-KKITEFDPAIVISPSGKYNAVKLGKYEDSNSVTCSVQHDNK 198 (229)
T ss_dssp EEEEESCBS---SCCEEEEECS-SEEEECCCEEEECTTSSEEEEEEEEETTTTTCEEEEEETTE
T ss_pred EEEEEEEeC---CCEEEEEecC-CEEecCccceEECCCCcEEEEECcccCCCCcEEEEEEeCCC
Confidence 99998 45 4 48999988 55432111 22334333333 577899999998754
No 364
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.06 E-value=7.4e-11 Score=75.13 Aligned_cols=109 Identities=14% Similarity=0.231 Sum_probs=67.2
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEE----EecCceEEeCCCcEEEecCCcEEEEEEec--CCCCCC-cEEE
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQ----VSTPYRVDVNPPLLSVHLDGSANFQCEIT--PYDSGP-YLIA 89 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~----v~~~~~~~~~~~~~~~~~g~~~~l~C~~~--~p~~~~-~~~~ 89 (150)
+.|.|......|.|.|.|.+.+..+.......+. +..+|.+.+.+.......|..+.|.|.+. .| . ..+.
T Consensus 89 s~L~i~~~~~~d~~~YtC~v~h~~~~~~~~~~i~~~~~~~~~P~V~v~~~~~~~~~g~~~~L~C~~~gf~P---~~i~v~ 165 (240)
T 4acp_A 89 SVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYP---SDIAVE 165 (240)
T ss_dssp EEEECCHHHHHHTCCEEEEEECC----CEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBS---SCCEEE
T ss_pred EEEEEechhccCCCEEEEEEEcCCCCccccccccccCCCCCCCEEEEECCChHHhcCCceEEEEEEeEEeC---CCcEEE
Confidence 5677877777789999999998755322222222 22445544333322223488899999998 55 4 4899
Q ss_pred EeecCcccCCCc---------c----eeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 90 WFKDGRQIPGRT---------S----STSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 90 w~~~~~~~~~~~---------~----~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
|.+++..+.... . .+.|.+......+.+.|.|.+.+...
T Consensus 166 W~k~g~~~~~~~~~~~~~~~dgt~~~~s~L~v~~~~~~~~~~ytC~V~h~~l 217 (240)
T 4acp_A 166 WESNGQPENNYKATPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEAL 217 (240)
T ss_dssp EEETTEECSSEEECCCEECTTSCEEEEEEEEEEHHHHHTTCCEEEEEECTTS
T ss_pred EEECCEECCCcCccCceECCCCCEEEEEEEEEChHHhCCCCEEEEEEEECCC
Confidence 999987653211 0 23455554444567899999998754
No 365
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.05 E-value=3e-09 Score=65.68 Aligned_cols=85 Identities=13% Similarity=0.159 Sum_probs=61.1
Q ss_pred CceEEeCCCcEEEecCCcEEEEEEecCCCCCCcEEEEeecCcccCC---------CcceeeEEEccCCCCCCceEEEEEE
Q psy11131 54 PYRVDVNPPLLSVHLDGSANFQCEITPYDSGPYLIAWFKDGRQIPG---------RTSSTSLVINPVGREDRGIYQCIAR 124 (150)
Q Consensus 54 ~~~~~~~~~~~~~~~g~~~~l~C~~~~p~~~~~~~~w~~~~~~~~~---------~~~~~~l~~~~~~~~~~g~y~C~~~ 124 (150)
+|.+...+. ..+.+|+.+.|.|.+..+ .+.+.|++++..+.. ......|.|.++..+|+|.|.|.+.
T Consensus 8 ~P~i~~~p~-~~v~~G~~v~L~C~~~~~---~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~ 83 (201)
T 1nkr_A 8 KPSLLAHPG-PLVKSEETVILQCWSDVM---FEHFLLHREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGS 83 (201)
T ss_dssp CCEEEEESC-SEEETTCCEEEEEEESSC---CSEEEEEEESSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCeEEEEcC-CccCCCCcEEEEEeccCC---CCEEEEEECCCcCCcceeeeecCCCCceEEEEeccCCcccCeEEEEeEe
Confidence 445544444 567899999999998755 679999998875531 1115689999999999999999998
Q ss_pred eCC----CCceeeeEEEEEcCc
Q psy11131 125 RSD----GDVAQGSAELQLGGT 142 (150)
Q Consensus 125 ~~~----g~~~~~~~~l~v~~~ 142 (150)
+.. ....+..+.|.|.+.
T Consensus 84 ~~~~~~~~~~~s~~~~l~V~~~ 105 (201)
T 1nkr_A 84 VTHSPYQVSAPSDPLDIVIIGL 105 (201)
T ss_dssp BTTBTTCCCCCCCCEEEEEECS
T ss_pred cCCCCccccCCCCCEEEEeecc
Confidence 642 112355667777653
No 366
>2aw2_A B and T lymphocyte attenuator; IGI domain, IGG domain, TNFRSF, protein-protein complex, IMM system; HET: NAG FUL; 2.80A {Homo sapiens} SCOP: b.1.1.1
Probab=99.02 E-value=5.8e-09 Score=56.67 Aligned_cols=77 Identities=19% Similarity=0.301 Sum_probs=60.2
Q ss_pred cEEEecCCcEEEEEEec--CCCCCCcEEEEeecC----cccCCCcc---------eeeEEEccCCCCCCceEEEEEEeCC
Q psy11131 63 LLSVHLDGSANFQCEIT--PYDSGPYLIAWFKDG----RQIPGRTS---------STSLVINPVGREDRGIYQCIARRSD 127 (150)
Q Consensus 63 ~~~~~~g~~~~l~C~~~--~p~~~~~~~~w~~~~----~~~~~~~~---------~~~l~~~~~~~~~~g~y~C~~~~~~ 127 (150)
...+..|+.+.|.|++. .+ .|.++|.+-+ ..+..... ...|.|.++...|.|.|.|.|....
T Consensus 20 ~hsv~~G~~f~leCpv~yc~~---rP~VtWcKln~~~c~~L~~~~q~w~E~~N~s~fvLhf~~V~~sDsGsYRCsAn~~s 96 (120)
T 2aw2_A 20 EHSILAGDPFELECPVKYCAN---RPHVTWCKLNGTTCVKLEDRQTSWKEEKNISFFILHFEPVLPNDNGSYRCSANFQS 96 (120)
T ss_dssp EEEEETTSCEEEEEEEECSSS---CCEEEEEEECSSCEEECCSSCEEEEECSSCEEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred cceEecCCeEEEEccEEeccC---CCceEEEecCCceEEECccccccceecCCeeEEEEEEeeeeEcCCcceEEEeeCCC
Confidence 35688999999999999 57 8999998754 33433221 3478899999999999999999998
Q ss_pred CCceeeeEEEEEcCc
Q psy11131 128 GDVAQGSAELQLGGT 142 (150)
Q Consensus 128 g~~~~~~~~l~v~~~ 142 (150)
|...+..+.+.|.+.
T Consensus 97 g~ieSHsvtI~Vt~~ 111 (120)
T 2aw2_A 97 NLIESHSTTLYVTDV 111 (120)
T ss_dssp EEEECCCEEEEEECG
T ss_pred CcEEeeEEEEEEEec
Confidence 865666777777664
No 367
>3udw_C Poliovirus receptor; PVR tigit IGSF signal transduction immunology, IGSF, cell SU receptor signalling, glycosylation, membrane protein; HET: NAG; 2.90A {Homo sapiens}
Probab=99.01 E-value=3.4e-09 Score=59.71 Aligned_cols=82 Identities=18% Similarity=0.300 Sum_probs=56.7
Q ss_pred CCcEEEecCCcEEEEEEec--CCCCC-CcEEEEeecCccc-------------CCCcc-------------eeeEEEccC
Q psy11131 61 PPLLSVHLDGSANFQCEIT--PYDSG-PYLIAWFKDGRQI-------------PGRTS-------------STSLVINPV 111 (150)
Q Consensus 61 ~~~~~~~~g~~~~l~C~~~--~p~~~-~~~~~w~~~~~~~-------------~~~~~-------------~~~l~~~~~ 111 (150)
+....+.+|+.+.|.|... .+... ...+.|++.+... ....+ ...|.|.++
T Consensus 7 p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v 86 (118)
T 3udw_C 7 PTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGL 86 (118)
T ss_dssp CSEEEEETTSCEEECCEEECCTTCCCEEEEEEEEETTCSBCSEEEETTTEEEETTCSSEEETTCCTTSCCCBCCEEECSC
T ss_pred CCeEEEeeCCcEEEEEEeECCCCCCCceEEEEEEEcCCCceEEEEeCCCCCccCCcCcEEEecccccCCCCCcEEEEeec
Confidence 4446788999999999995 33100 1159999864221 00001 347999999
Q ss_pred CCCCCceEEEEEEe-CCCCceeeeEEEEEcCcC
Q psy11131 112 GREDRGIYQCIARR-SDGDVAQGSAELQLGGTR 143 (150)
Q Consensus 112 ~~~~~g~y~C~~~~-~~g~~~~~~~~l~v~~~p 143 (150)
..+|+|.|.|.+.+ ..+ .....+.|.|.++|
T Consensus 87 ~~~D~G~Y~C~v~~~~~~-~~~~~~~L~V~~~P 118 (118)
T 3udw_C 87 RVEDEGNYTCLFVTFPQG-SRSVDIWLRVLAKP 118 (118)
T ss_dssp CGGGCEEEEEEEEEETTE-EEEEEEEEEEEC--
T ss_pred ChHHCeEEEEEEEECCCC-CccceEEEEEEeCC
Confidence 99999999999998 666 57778888887765
No 368
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.00 E-value=3.6e-09 Score=71.12 Aligned_cols=78 Identities=21% Similarity=0.282 Sum_probs=62.2
Q ss_pred CCcEEEecCCcEEEEEEecCCCCCCcEEEEeecCcccCCCc----c----eeeEEEccCCCCCCceEEEEEEeCCCCcee
Q psy11131 61 PPLLSVHLDGSANFQCEITPYDSGPYLIAWFKDGRQIPGRT----S----STSLVINPVGREDRGIYQCIARRSDGDVAQ 132 (150)
Q Consensus 61 ~~~~~~~~g~~~~l~C~~~~p~~~~~~~~w~~~~~~~~~~~----~----~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~ 132 (150)
+....+.+|+.+.+.|.+..| .+.+.|++++..+.... + ...|.|.++..+|+|.|+|.|.|..| ..+
T Consensus 253 ~~~v~v~~G~~~~l~C~~~gp---~p~i~W~~~~~~~~~~~~~~~r~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g-~~~ 328 (361)
T 2xot_A 253 ESAWEAHLGDTLTIRCDTKQQ---GMTKVWVSPSNEQVLSQGSNGSVSVRNGDLFFKKVQVEDGGVYTCYAMGETF-NET 328 (361)
T ss_dssp CCCCEEETTCCEEECCCCSST---TCEEEEECTTSCBCCSCCSSSSEEEETTEEEESSCCTTSCEEEEEEEECSSC-EEE
T ss_pred ccCceecCCCeEEEEeEeeCC---CCeEEEEeCCCeeEeecccCCceEeecCeEEEeecCcccCEEEEEEEecCCC-ccE
Confidence 445678999999999998766 78999999765433221 1 35799999999999999999999988 677
Q ss_pred eeEEEEEcCc
Q psy11131 133 GSAELQLGGT 142 (150)
Q Consensus 133 ~~~~l~v~~~ 142 (150)
..+.+.|...
T Consensus 329 ~~~~l~V~~~ 338 (361)
T 2xot_A 329 LSVELKVYNF 338 (361)
T ss_dssp EEEEEEEESS
T ss_pred EEEEEEEEee
Confidence 8888888654
No 369
>4gjt_B Poliovirus receptor-related protein 4; six-bladed -propeller, IGV-like fold, viral entry, MV-H, NEC BETA4/BETA5 groove; HET: NAG; 3.10A {Homo sapiens}
Probab=98.99 E-value=8.1e-09 Score=58.97 Aligned_cols=81 Identities=17% Similarity=0.261 Sum_probs=54.7
Q ss_pred CCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCC------------------Ccc-----------eeeEEEc
Q psy11131 60 NPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPG------------------RTS-----------STSLVIN 109 (150)
Q Consensus 60 ~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~------------------~~~-----------~~~l~~~ 109 (150)
.|..+.+.+|+++.|.|... .+......+.|++....... ..+ ...|.|.
T Consensus 6 ~p~~vtv~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~ 85 (123)
T 4gjt_B 6 TSDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLR 85 (123)
T ss_dssp CCSEEECCTTSEEEECCEECCCTTCCEEEEEEEECCCSSCCCEEEEECSSSCCCBCGGGTTTEECCCSSCCTTBCCEEEE
T ss_pred cCCEEEEEcCCCEEEEEEEeCCccCceeEEEEEEcCCCCCcceeEEEEecCCcEeCccceeEEEEecCCCcCCEEEEEEC
Confidence 35567788999999999987 44211356889874321000 000 3469999
Q ss_pred cCCCCCCceEEEEEEe-CCCCceeeeEEEEEcC
Q psy11131 110 PVGREDRGIYQCIARR-SDGDVAQGSAELQLGG 141 (150)
Q Consensus 110 ~~~~~~~g~y~C~~~~-~~g~~~~~~~~l~v~~ 141 (150)
++..+|+|.|.|.+.+ ..| .....+.|.|.+
T Consensus 86 ~v~~~DsG~Y~C~v~t~~~g-~~~~~~~L~VlE 117 (123)
T 4gjt_B 86 NAVQADEGEYECRVSTFPAG-SFQARLRLRVLE 117 (123)
T ss_dssp SCCSSSCSEEEEEEEESSSC-EEEEEEEEEC--
T ss_pred CCChHHCEEEEEEEEECCCC-eEEeEEEEEEEE
Confidence 9999999999999876 455 566777777765
No 370
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=98.99 E-value=1.8e-09 Score=64.74 Aligned_cols=81 Identities=20% Similarity=0.381 Sum_probs=60.8
Q ss_pred eEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCcceeeEEEccCCCCCCceEEEEEEeCCCCceeee
Q psy11131 56 RVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDGDVAQGS 134 (150)
Q Consensus 56 ~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~ 134 (150)
.+...+....+.+|+.+.|.|.+. .|. .+.+.|++++..+... ...+.+.++...|.|.|.|.+.+... +..
T Consensus 6 ~i~~~p~~~~v~~G~~v~l~C~~~~~p~--~~~~~W~~~g~~~~~~--~~~~~~~~~~~~d~G~Y~C~~~~~~~---s~~ 78 (170)
T 3ry4_A 6 VLKLEPPWINVLQEDSVTLTCQGARSPE--SDSIQWFHNGNLIPTH--TQPSYRFKANNNDSGEYTCQTGQTSL---SDP 78 (170)
T ss_dssp EEEEESCCSEEETTCEEEEEEESCCCSS--SSCEEEEETTEECTTC--CSSEEEEECCGGGCEEEEEEETTSBC---CCC
T ss_pred EEEeCCCCeEEECCCcEEEEEEecCCCC--cceEEEEECCeEcccC--ccceEEEecccccCeEEEEEEeCCCc---eEe
Confidence 344455556788999999999998 541 5789999999887654 34667788999999999999986433 455
Q ss_pred EEEEEcCcC
Q psy11131 135 AELQLGGTR 143 (150)
Q Consensus 135 ~~l~v~~~p 143 (150)
+.+.|..++
T Consensus 79 ~~l~v~~~~ 87 (170)
T 3ry4_A 79 VHLTVLFEW 87 (170)
T ss_dssp EEEEEECCS
T ss_pred EEEEEECCc
Confidence 677776654
No 371
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=98.98 E-value=1.1e-09 Score=61.12 Aligned_cols=51 Identities=25% Similarity=0.355 Sum_probs=41.4
Q ss_pred ecCCCCceEEeC----CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCc
Q psy11131 5 LVLPGPRTRVLG----PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPY 55 (150)
Q Consensus 5 ~~~~~~~~~~~~----~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~ 55 (150)
++..+.++.+.. .+|.|.++..+|+|.|+|.+.|..|..+..+.|.|.++|
T Consensus 53 ~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~pP 107 (107)
T 3knb_B 53 QLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARNAAGEAYAAAAVTVLEPP 107 (107)
T ss_dssp ECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC--
T ss_pred cccceeeEEEeecCceEEEEEecCChhhCEEEEEEEEECCCEEEEEEEEEEEcCC
Confidence 455566666543 479999999999999999999999999999999998754
No 372
>1jhl_L IGG1-kappa D11.15 FV (light chain); complex(antibody-antigen); 2.40A {Mus musculus} SCOP: b.1.1.1
Probab=98.97 E-value=1.5e-08 Score=56.43 Aligned_cols=66 Identities=17% Similarity=0.372 Sum_probs=50.2
Q ss_pred eCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCc--c---c---------CCCcc--------eeeEEEccCCCCC
Q psy11131 59 VNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGR--Q---I---------PGRTS--------STSLVINPVGRED 115 (150)
Q Consensus 59 ~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~--~---~---------~~~~~--------~~~l~~~~~~~~~ 115 (150)
..|....+.+|+.+.|.|.+. .| .+.+.|++... . + ....+ ...|.|.++..+|
T Consensus 6 q~p~~~~~~~G~~v~L~C~~~~~~---~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 82 (108)
T 1jhl_L 6 QSPSYLVASPGETITINCRASKSI---SKSLAWYQEKPGKTNNLLIYSGSTLQSGIPSRFSGSGSGTDFTLTISSLEPED 82 (108)
T ss_dssp EECSEEEECTTSCEEEEEEESSCC---TTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEESSSEEEEEECSCCTTC
T ss_pred ccCCeeEEcCCCCEEEEeEECCCC---CceEEEEEECCCCCCEEEEEcCCCcCCCCCceEEEEecCCEEEEEECCCCHHH
Confidence 345667889999999999998 87 78999987531 1 0 00111 3579999999999
Q ss_pred CceEEEEEEeCC
Q psy11131 116 RGIYQCIARRSD 127 (150)
Q Consensus 116 ~g~y~C~~~~~~ 127 (150)
+|.|.|.+.|..
T Consensus 83 sG~Y~C~~~n~~ 94 (108)
T 1jhl_L 83 FAMYICQQHNEY 94 (108)
T ss_dssp CSEEEEEECSSS
T ss_pred CEEEEEEEccCC
Confidence 999999998753
No 373
>1eaj_A Coxsackie virus and adenovirus receptor; virus/viral protein receptor, immunoglobulin V domain fold, symmetric dimer; 1.35A {Homo sapiens} SCOP: b.1.1.1 PDB: 1f5w_A 2j12_B 2j1k_A 2wbw_B* 2w9l_A* 1rsf_A 1jew_R 1kac_B 1p69_B 1p6a_B
Probab=98.97 E-value=4.4e-09 Score=59.80 Aligned_cols=80 Identities=23% Similarity=0.402 Sum_probs=57.2
Q ss_pred CCcEEEecCCcEEEEEEec-CCCC-CCcEEEEeecCcc-------c--------------CCCcc-----------eeeE
Q psy11131 61 PPLLSVHLDGSANFQCEIT-PYDS-GPYLIAWFKDGRQ-------I--------------PGRTS-----------STSL 106 (150)
Q Consensus 61 ~~~~~~~~g~~~~l~C~~~-~p~~-~~~~~~w~~~~~~-------~--------------~~~~~-----------~~~l 106 (150)
+....+.+|+.+.|.|... .+.. ..+.+.|++.+.. + ....+ ...|
T Consensus 12 ~~~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL 91 (126)
T 1eaj_A 12 EEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDASI 91 (126)
T ss_dssp EEEEEEETTSCEEECCBEECCTTCCSCEEEEEEEEETTSSCCSEEEEEEETTEEECTTSSTTTTTEEECCSCGGGTBCCE
T ss_pred CceEEEEeCCCEEEEEEEecCCCCCCceEEEEEEeCCCcCCCceEEEEEeCCeeccccCccccCeeEEEcccccCCeEEE
Confidence 3456788999999999987 5411 0257999875421 0 00011 2579
Q ss_pred EEccCCCCCCceEEEEEEeCCCCceeeeEEEEEcC
Q psy11131 107 VINPVGREDRGIYQCIARRSDGDVAQGSAELQLGG 141 (150)
Q Consensus 107 ~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~ 141 (150)
.|.++..+|+|.|.|.+.+..+ .....+.|.|..
T Consensus 92 ~I~~v~~~D~G~Y~C~v~~~~~-~~~~~~~L~V~~ 125 (126)
T 1eaj_A 92 NVTNLQLSDIGTYQCKVKKAPG-VANKKIHLVVLV 125 (126)
T ss_dssp EECSCCGGGCEEEEEEEEETTE-EEEEEEEEEEEC
T ss_pred EECcCChHHCeEEEEEEEcCCc-cCCcEEEEEEEc
Confidence 9999999999999999999877 567778887764
No 374
>3q0h_A T cell immunoreceptor with IG and ITIM domains; immune receptor, adhesion, structural genomics, NEW YORK STR genomics research consortium, nysgrc; 1.70A {Homo sapiens} PDB: 3rq3_A 3udw_A* 3ucr_A
Probab=98.97 E-value=4.5e-09 Score=59.54 Aligned_cols=83 Identities=19% Similarity=0.326 Sum_probs=58.4
Q ss_pred CCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCC-------------Ccc-----eeeEEEccCCCCCCceEEE
Q psy11131 61 PPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPG-------------RTS-----STSLVINPVGREDRGIYQC 121 (150)
Q Consensus 61 ~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~-------------~~~-----~~~l~~~~~~~~~~g~y~C 121 (150)
+....+.+|+.+.|.|... .+ .....+.|++.+..+.. ..+ ...|.|.++..+|.|.|.|
T Consensus 10 ~~~v~~~~G~~v~L~C~~~~~~-~~~~~v~W~k~~~~i~~~~~~~~~~~~~~~~~R~~~~~~~sL~I~~v~~~D~G~Y~C 88 (117)
T 3q0h_A 10 TGNISAEKGGSIILQCHLSSTT-AQVTQVNWEQQDQLLAICNADLGWHISPSFKDRVAPGPGLGLTLQSLTVNDTGEYFC 88 (117)
T ss_dssp SCCEEEETTCCEEECEEEESCC-CEEEEEEEEETTEEEEEEETTTEEECCGGGTTTEEECSTTCEEECSCCGGGCEEEEE
T ss_pred cCCEEEecCCCEEEEEEecCCC-CCEEEEEEEeCCEEEEEEECCCCceeCccccCcEEeCCceEEEEeeCChhhCEEEEE
Confidence 4457788999999999987 32 11457899886432110 011 3579999999999999999
Q ss_pred EEEe-CCCCceeeeEEEEEcCcCcc
Q psy11131 122 IARR-SDGDVAQGSAELQLGGTRNI 145 (150)
Q Consensus 122 ~~~~-~~g~~~~~~~~l~v~~~p~~ 145 (150)
.+.+ ..| .....+.|.|.+||.+
T Consensus 89 ~v~~~~~g-~~~~~~~L~V~~pp~~ 112 (117)
T 3q0h_A 89 IYHTYPDG-TYTGRIFLEVLESSVA 112 (117)
T ss_dssp EEEEETTC-CEEEEEEEEEECC---
T ss_pred EEEECCCC-CeEEEEEEEEEccCcc
Confidence 9764 556 5678889999887754
No 375
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=98.96 E-value=1.4e-08 Score=63.68 Aligned_cols=78 Identities=18% Similarity=0.328 Sum_probs=54.0
Q ss_pred CcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccC-----------C------Cc-----------ceeeEEEccCC
Q psy11131 62 PLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIP-----------G------RT-----------SSTSLVINPVG 112 (150)
Q Consensus 62 ~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~-----------~------~~-----------~~~~l~~~~~~ 112 (150)
..+.+.+|+.+.|.|.+. .+......+.|++++.... . .. ....|.|.++.
T Consensus 12 ~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~ 91 (226)
T 4f80_A 12 GPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVT 91 (226)
T ss_dssp SCEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSCC
T ss_pred CCEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeCc
Confidence 346788999999999987 4411134799988653210 0 00 03579999999
Q ss_pred CCCCceEEEEEEeCCCCceeeeEEEEEc
Q psy11131 113 REDRGIYQCIARRSDGDVAQGSAELQLG 140 (150)
Q Consensus 113 ~~~~g~y~C~~~~~~g~~~~~~~~l~v~ 140 (150)
.+|.|.|.|.+.|..| .....+.+.+.
T Consensus 92 ~~D~G~Y~C~a~n~~~-~~~~~v~~~~~ 118 (226)
T 4f80_A 92 ASDSGKYLCYFQDGDF-YEKALVELKVA 118 (226)
T ss_dssp GGGCEEEEEEEEETTE-EEEEEEEEEEE
T ss_pred hHHCeeEEEEEECCCc-EEEEEEEEeec
Confidence 9999999999999877 45555555443
No 376
>3r08_E T-cell surface glycoprotein CD3 epsilon chain; antibody, T-cell receptor, signalling, immune SY; 4.10A {Cricetulus migratorius}
Probab=98.96 E-value=8.2e-10 Score=58.38 Aligned_cols=59 Identities=22% Similarity=0.453 Sum_probs=47.3
Q ss_pred CCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCcceeeEEEccC-CCCCCceEEEEEEe
Q psy11131 61 PPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRTSSTSLVINPV-GREDRGIYQCIARR 125 (150)
Q Consensus 61 ~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~-~~~~~g~y~C~~~~ 125 (150)
|.......|+++.|.|.+. .| . +.|.+++..+.... ...|.|.++ ..+|+|.|.|.+.+
T Consensus 6 p~~~v~~~G~~v~L~C~~~g~P---~--i~W~kdg~~l~~~~-~~~L~I~~v~~~~DsG~Y~C~A~t 66 (82)
T 3r08_E 6 IEYKVSISGTSVELTCPLDSDE---N--LKWEKNGQELPQKH-DKHLVLQDFSEVEDSGYYVCYTPA 66 (82)
T ss_dssp CCCEEEEETTEEEEECSSCCCS---S--CEEEETTEECTTCC-SSCCBCCSCCTTTTCSCEEEECSS
T ss_pred CceeEEEcCCeEEEEEECCCCC---c--EEEEECCEECcCCC-CCEEEECccCccCcCEEEEEEEcc
Confidence 3445567899999999998 66 4 99999998876442 568999996 77999999999864
No 377
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=98.96 E-value=6.8e-09 Score=64.41 Aligned_cols=80 Identities=24% Similarity=0.377 Sum_probs=57.7
Q ss_pred eCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCc--cc----------CC--Ccc--------eeeEEEccCCCCC
Q psy11131 59 VNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGR--QI----------PG--RTS--------STSLVINPVGRED 115 (150)
Q Consensus 59 ~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~--~~----------~~--~~~--------~~~l~~~~~~~~~ 115 (150)
..+....+.+|+.+.|.|.+. .| .+.+.|++++. .+ .. ..+ ...|.|.++..+|
T Consensus 6 ~~p~~~~v~~G~~v~L~C~~~~~~---~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 82 (213)
T 3d9a_L 6 QSPATLSVTPGNSVSLSCRASQSI---GNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETED 82 (213)
T ss_dssp EECSEEEECTTCCEEEEEEESSCC---TTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGG
T ss_pred eCCccEEEeCCCcEEEEEECCCCC---CCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhh
Confidence 345667789999999999998 87 78899987432 11 00 011 2489999999999
Q ss_pred CceEEEEEEeCCCCceeeeEEEEEcC
Q psy11131 116 RGIYQCIARRSDGDVAQGSAELQLGG 141 (150)
Q Consensus 116 ~g~y~C~~~~~~g~~~~~~~~l~v~~ 141 (150)
.|.|.|.+.+..+........+.|..
T Consensus 83 ~G~Y~C~~~~~~~~~~~~~~~l~V~~ 108 (213)
T 3d9a_L 83 FGMYFCQQSNSWPYTFGGGTKLEIKR 108 (213)
T ss_dssp CEEEEEEECSSSSCEECCCEEEEECC
T ss_pred CEEEEEeeecCCcceeCCCEEEEEec
Confidence 99999999987763333345666655
No 378
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=98.96 E-value=5.6e-09 Score=63.28 Aligned_cols=77 Identities=14% Similarity=0.194 Sum_probs=57.4
Q ss_pred EEEecCCcEEEEEEe-c--CCCCCCcEEEEeecCcccC----------CCcc-----eeeEEEccCCCCCCceEEEEEEe
Q psy11131 64 LSVHLDGSANFQCEI-T--PYDSGPYLIAWFKDGRQIP----------GRTS-----STSLVINPVGREDRGIYQCIARR 125 (150)
Q Consensus 64 ~~~~~g~~~~l~C~~-~--~p~~~~~~~~w~~~~~~~~----------~~~~-----~~~l~~~~~~~~~~g~y~C~~~~ 125 (150)
+.+.+|+.+.|.|.. . .+ .+.+.|++++..+. ...+ ...|.|.++..+|+|.|.|.+.|
T Consensus 6 v~~~~G~~v~L~c~~~~~~~~---~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~gsL~I~~v~~~D~G~Y~C~~~n 82 (176)
T 1hng_A 6 VWGALGHGINLNIPNFQMTDD---IDEVRWERGSTLVAEFKRKMKPFLKSGAFEILANGDLKIKNLTRDDSGTYNVTVYS 82 (176)
T ss_dssp EEEETTSCEEECCTTCCCCTT---EEEEEEEETTEEEEEEETTSCCEESSTTEEECTTSCEEESSCCGGGCEEEEEEEEE
T ss_pred EEEEcCCcEEEcCCCCCcccc---cccEEEEeCCceeEEEcCCCeecCCCCeEEECCCCcEEEcccccccCEEEEEEEEe
Confidence 457889999999943 2 44 67999999875321 1111 34699999999999999999999
Q ss_pred CCCCc-eeeeEEEEEcCcC
Q psy11131 126 SDGDV-AQGSAELQLGGTR 143 (150)
Q Consensus 126 ~~g~~-~~~~~~l~v~~~p 143 (150)
..|.. ....+.|.|..++
T Consensus 83 ~~g~~~~~~~~~l~V~~~~ 101 (176)
T 1hng_A 83 TNGTRILNKALDLRILEMV 101 (176)
T ss_dssp TTCCEEEEEEEEEEEECCC
T ss_pred CCCCEEEEEEEEEEEeCCC
Confidence 98843 3667788887653
No 379
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=98.95 E-value=7.2e-08 Score=61.84 Aligned_cols=120 Identities=16% Similarity=0.313 Sum_probs=79.8
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEec--CceEEe-CCCcEEEecCCcEEEEEEe--c--CC--CCCCcE
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVST--PYRVDV-NPPLLSVHLDGSANFQCEI--T--PY--DSGPYL 87 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~--~~~~~~-~~~~~~~~~g~~~~l~C~~--~--~p--~~~~~~ 87 (150)
+.|.|..++..|+|.|+|.+.+..|.......+.|.. .+.+.. .|.......+..+.|.+.+ . .| ......
T Consensus 52 ~tLti~s~t~sdSG~YqCvVTDa~Gcs~tSs~VtVT~~a~l~i~it~P~s~~vssg~sVtL~aTVt~SGGtppA~~~~yT 131 (304)
T 3shs_A 52 ATLTVADATSENAGSYKVTVQDTDTMTSVESEVFLMEEAELIVNITEPQHFYVSSQTDVELHATVKFSGGKTPADNYELH 131 (304)
T ss_dssp SEEEESSCCGGGCEEEEEEEEETTTCCEEECCCEEECBCCEEEEESSCSEEEECSSCCEEEEEEEEETTSCCSSTTCCCE
T ss_pred ceEEeeeccccCCeEEEEEEEECCCCeeeeeeEEEeccCceeEEecCCCceeccCCCeEEEEEEEeccCCCCcccCCCce
Confidence 5789999999999999999988766543333333332 222322 3444555667788888877 2 11 000369
Q ss_pred EEEeecCcccCCCcceeeEEEccCCCCCCceEEEEEEeCCC-CceeeeEEEEE
Q psy11131 88 IAWFKDGRQIPGRTSSTSLVINPVGREDRGIYQCIARRSDG-DVAQGSAELQL 139 (150)
Q Consensus 88 ~~w~~~~~~~~~~~~~~~l~~~~~~~~~~g~y~C~~~~~~g-~~~~~~~~l~v 139 (150)
+.|++++..+.. ...+.+......+.|.|.|.+++..+ ...+....+.+
T Consensus 132 YQWyKngt~Isg---Aq~lT~sS~TateaG~YtV~VTn~~~~c~~s~~~~i~~ 181 (304)
T 3shs_A 132 YSWSKGEDVIDT---TQDITIQEFTADKNGVYTVKVWGESEDSAASASTKIML 181 (304)
T ss_dssp EEEEETTEEEES---SSEEEECSCCGGGCEEEEEEEESSSGGGCEEEEEEEEE
T ss_pred eEEeeCCeEccC---ccccceeeEEecCCeEEEEEEEcCCCCcccccceEEEE
Confidence 999999987642 23567777788899999999998866 33444444444
No 380
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=98.95 E-value=7.4e-09 Score=64.32 Aligned_cols=83 Identities=17% Similarity=0.306 Sum_probs=55.6
Q ss_pred CCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCC-------------------------------CcceeeEEE
Q psy11131 61 PPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPG-------------------------------RTSSTSLVI 108 (150)
Q Consensus 61 ~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~-------------------------------~~~~~~l~~ 108 (150)
+..+.+.+|+.+.|.|.+. .+......+.|++++..+.. ......|.|
T Consensus 8 p~~V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I 87 (225)
T 4fmk_A 8 LPEVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAF 87 (225)
T ss_dssp CSEEEEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEE
T ss_pred CCEEEEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEE
Confidence 3456788999999999998 55100125899986543210 000357999
Q ss_pred ccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCcC
Q psy11131 109 NPVGREDRGIYQCIARRSDGDVAQGSAELQLGGTR 143 (150)
Q Consensus 109 ~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p 143 (150)
.++..+|+|.|.|.+.+..+........+.+..+|
T Consensus 88 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~ 122 (225)
T 4fmk_A 88 RGLRVEDEGNYTCEFATFPNGTRRGVTWLRVIAQP 122 (225)
T ss_dssp CSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBCC
T ss_pred ccCCHHHCcceEEEEEeCCCcceeeeeeeeeecCC
Confidence 99999999999999998776444444445554443
No 381
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.94 E-value=1.9e-08 Score=64.60 Aligned_cols=85 Identities=14% Similarity=0.208 Sum_probs=61.0
Q ss_pred CceEEeCCCcEEEecCCcEEEEEEecCCCCCCcEEEEeecCcccCC---------CcceeeEEEccCCCCCCceEEEEEE
Q psy11131 54 PYRVDVNPPLLSVHLDGSANFQCEITPYDSGPYLIAWFKDGRQIPG---------RTSSTSLVINPVGREDRGIYQCIAR 124 (150)
Q Consensus 54 ~~~~~~~~~~~~~~~g~~~~l~C~~~~p~~~~~~~~w~~~~~~~~~---------~~~~~~l~~~~~~~~~~g~y~C~~~ 124 (150)
+|.+...+. ..+.+|+.+.|.|.+..+ .+.+.|++++..+.. ......|.|.++..+|+|.|.|.+.
T Consensus 7 kP~i~~~P~-~~V~~G~~VtL~C~~~~~---~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~ 82 (257)
T 1b6u_A 7 KPSLLAHPG-PLVKSEETVILQCWSDVR---FQHFLLHREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYGS 82 (257)
T ss_dssp CCEECCBSC-SEEESSCCEEEEEEESSC---CSEEEEEEESTTCEEEEEECBCCTTCEEEEEEECSCCTTTCEEEEEEEE
T ss_pred CCEEEEcCC-CEecCCCCEEEEEecCCC---CcEEEEEECCCCCCcceeeeeccCCCceEEEEeecCCcccCEEEEEeEe
Confidence 444444444 567899999999998744 678999998875421 1115689999999999999999998
Q ss_pred eCC----CCceeeeEEEEEcCc
Q psy11131 125 RSD----GDVAQGSAELQLGGT 142 (150)
Q Consensus 125 ~~~----g~~~~~~~~l~v~~~ 142 (150)
+.. ....+..+.|.|.+.
T Consensus 83 ~~~~~~~~s~~S~~~~L~V~~~ 104 (257)
T 1b6u_A 83 VTHSPYQLSAPSDPLDIVITGL 104 (257)
T ss_dssp CSSCTTSCCCCCCCEEEEEECS
T ss_pred ccCCCccccccCCCEEEecccC
Confidence 642 123456677777653
No 382
>1neu_A Myelin P0 protein; structural protein, glycoprotein, transmembrane, phosphorylation, immunoglobulin fold, signal; 1.90A {Rattus norvegicus} SCOP: b.1.1.1
Probab=98.94 E-value=1.3e-08 Score=57.93 Aligned_cols=86 Identities=13% Similarity=0.170 Sum_probs=55.6
Q ss_pred CCCcEEEecCCcEEEEEEec-C-CCCCCcEEEEeecCcc------c------------C--CCcc----------eeeEE
Q psy11131 60 NPPLLSVHLDGSANFQCEIT-P-YDSGPYLIAWFKDGRQ------I------------P--GRTS----------STSLV 107 (150)
Q Consensus 60 ~~~~~~~~~g~~~~l~C~~~-~-p~~~~~~~~w~~~~~~------~------------~--~~~~----------~~~l~ 107 (150)
.+..+.+.+|+.+.|.|... . +....+.+.|++.+.. + . ...+ ...|.
T Consensus 5 ~~~~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 84 (124)
T 1neu_A 5 TDREVYGAVGSQVTLHCSFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPSWKDGSIV 84 (124)
T ss_dssp CCSEEEEETTSCEEECCEEECSSCCCSCCEEEEEEEETTCCCCEEEEEEETTEEEECSSSTTTTCEEECCBGGGTBCCEE
T ss_pred cCCeEEEEeCCeEEEEeEEeCCCCCCCceEEEEEEcCCCCCceEEEEEecCCeeccccCccccCcEEEecCCcCCeEEEE
Confidence 34566788999999999985 3 1111678999874320 0 0 0111 25799
Q ss_pred EccCCCCCCceEEEEEEeCCCC-ceeeeEEEEEcCcCcc
Q psy11131 108 INPVGREDRGIYQCIARRSDGD-VAQGSAELQLGGTRNI 145 (150)
Q Consensus 108 ~~~~~~~~~g~y~C~~~~~~g~-~~~~~~~l~v~~~p~~ 145 (150)
|.++..+|+|.|.|.+.+..+. .....+.|.|.++|+.
T Consensus 85 I~~v~~~D~G~Y~C~v~~~~~~~~~~~~v~L~V~~~p~~ 123 (124)
T 1neu_A 85 IHNLDYSDNGTFTCDVKNPPDIVGKTSQVTLYVFEKVPT 123 (124)
T ss_dssp ECSCCGGGCEEEEEEEEC----CCEEEEEEEEEEC----
T ss_pred EccCChhhCEEEEEEEEcCCCCcCcEeeEEEEEecCCCC
Confidence 9999999999999999987653 2466788888887763
No 383
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=98.94 E-value=4.9e-09 Score=65.04 Aligned_cols=78 Identities=19% Similarity=0.288 Sum_probs=57.9
Q ss_pred eCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeec--CcccC------------CCcc--------eeeEEEccCCCCC
Q psy11131 59 VNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKD--GRQIP------------GRTS--------STSLVINPVGRED 115 (150)
Q Consensus 59 ~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~--~~~~~------------~~~~--------~~~l~~~~~~~~~ 115 (150)
..+ ...+.+|+.+.|.|.+. .| .+.+.|++. +.... ...+ ...|.|.++..+|
T Consensus 6 ~~~-~~~v~~G~~v~L~C~~~~~~---~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 81 (213)
T 3mj8_L 6 QPP-LVSVALGQKATITCSGDKLS---DVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAGD 81 (213)
T ss_dssp CCS-EEEEETTSCEEEEEECSSTT---TSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGGG
T ss_pred eCC-cEEEeCCCCEEEEEEcCCCC---CceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChhh
Confidence 344 67889999999999999 88 899999873 21110 0001 3569999999999
Q ss_pred CceEEEEEEeCCC--CceeeeEEEEEc
Q psy11131 116 RGIYQCIARRSDG--DVAQGSAELQLG 140 (150)
Q Consensus 116 ~g~y~C~~~~~~g--~~~~~~~~l~v~ 140 (150)
.|.|.|.+.+..+ ........|.|.
T Consensus 82 ~G~Y~C~~~~~~~~~~~~~~~~~l~V~ 108 (213)
T 3mj8_L 82 EADYYCQSWDGTNSAWVFGSGTKVTVL 108 (213)
T ss_dssp CEEEEEEEEETTTTEEEEBCCEEEEEE
T ss_pred CEEEEEEeccCCcceeEEcCceEEEEe
Confidence 9999999999876 234555677776
No 384
>3kgr_A LAIR-1, hlair1, leukocyte-associated immunoglobulin-like receptor; IG-like domain, cell membrane, glycoprotein; 1.80A {Homo sapiens} PDB: 3rp1_A
Probab=98.94 E-value=1.8e-08 Score=56.05 Aligned_cols=86 Identities=16% Similarity=0.213 Sum_probs=61.8
Q ss_pred CceEEeCCCcEEEecCCcEEEEEEecCCCCCCcEEEEeecCcccC-----C-----CcceeeEEEccCCCCCCceEEEEE
Q psy11131 54 PYRVDVNPPLLSVHLDGSANFQCEITPYDSGPYLIAWFKDGRQIP-----G-----RTSSTSLVINPVGREDRGIYQCIA 123 (150)
Q Consensus 54 ~~~~~~~~~~~~~~~g~~~~l~C~~~~p~~~~~~~~w~~~~~~~~-----~-----~~~~~~l~~~~~~~~~~g~y~C~~ 123 (150)
+|.+...+.. .+..|+.+.|.|..... ...+.|++++.... . ......|.|..+...|.|.|.|.+
T Consensus 9 kPsL~a~P~~-vv~~G~~VtL~C~~~~~---~~~f~l~k~g~~~~~~~~~~~~~~~~~~~~~f~i~~vt~~~aG~Y~C~~ 84 (106)
T 3kgr_A 9 RPSISAEPGT-VIPLGSHVTFVCRGPVG---VQTFRLERESRSTYNDTEDVSQASPSESEARFRIDSVSEGNAGPYRCIY 84 (106)
T ss_dssp CCEEEEESCS-EEETTCCEEEEEEECTT---CCEEEEEEGGGTEEEEECCCEEEETTEEEEEEEESSCCGGGCEEEEEEE
T ss_pred CCEEEEeCCC-ccCCCCeEEEEEEccCC---CcEEEEEECCCccccccccccccCCCCcceEEEecCCCcCCCceEEEEe
Confidence 3444444443 57889999999998733 56799999886541 1 111568999999999999999999
Q ss_pred EeCCC-CceeeeEEEEEcCcC
Q psy11131 124 RRSDG-DVAQGSAELQLGGTR 143 (150)
Q Consensus 124 ~~~~g-~~~~~~~~l~v~~~p 143 (150)
.+..+ ...+..+.|.|.+.+
T Consensus 85 ~~~~~~S~~Sdpl~L~Vtg~~ 105 (106)
T 3kgr_A 85 YKPPKWSEQSDYLELLVKEAA 105 (106)
T ss_dssp EETTEECCCCCCEEEEEECC-
T ss_pred eCCCcccCCCCCEEEEEeCCC
Confidence 88642 346778888887643
No 385
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.93 E-value=1.2e-08 Score=64.99 Aligned_cols=84 Identities=14% Similarity=0.119 Sum_probs=61.3
Q ss_pred CceEEeCCCcEEEecCCcEEEEEEecCCCCCCcEEEEeecCcccCC-------CcceeeEEEccCCCCCCceEEEEEEeC
Q psy11131 54 PYRVDVNPPLLSVHLDGSANFQCEITPYDSGPYLIAWFKDGRQIPG-------RTSSTSLVINPVGREDRGIYQCIARRS 126 (150)
Q Consensus 54 ~~~~~~~~~~~~~~~g~~~~l~C~~~~p~~~~~~~~w~~~~~~~~~-------~~~~~~l~~~~~~~~~~g~y~C~~~~~ 126 (150)
+|.+...+.. .+.+|+.+.|.|.+..+ ...+.|++++..+.. ......|.|.++..+|+|.|.|.+.+.
T Consensus 7 kP~i~~~P~~-~v~~G~~VtL~C~~~~~---~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 82 (242)
T 1p6f_A 7 KPFIWAEPHF-MVPKEKQVTICCQGNYG---AVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVG 82 (242)
T ss_dssp CCEEEEESCS-EEETTCCEEEEEECCTT---CCEEEEEETTEEEEEECCSSCTTCCEEEEEECSCCGGGCEEEEEEEEET
T ss_pred CCEEEeeCCC-ccCCCCcEEEEEeeCCC---CcEEEEEECCCccccccccccCCcceeEEEecCCCcccCeEEEEEEecC
Confidence 4455555554 68899999999998744 578999998865421 111568999999999999999999886
Q ss_pred CCC-ceeeeEEEEEcC
Q psy11131 127 DGD-VAQGSAELQLGG 141 (150)
Q Consensus 127 ~g~-~~~~~~~l~v~~ 141 (150)
.+. ..+..+.|.|.+
T Consensus 83 ~~~s~~S~~~~L~V~~ 98 (242)
T 1p6f_A 83 ELWSEPSNLLDLVVTE 98 (242)
T ss_dssp TEECCCCCCEEEEEEC
T ss_pred CccccCCcceEEEeec
Confidence 431 235667777764
No 386
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=98.93 E-value=8e-09 Score=65.62 Aligned_cols=86 Identities=19% Similarity=0.265 Sum_probs=61.1
Q ss_pred CCCcEEEecCCcEEEEEEec-CC--CCCCcEEEEeecCcccCC-----------------Ccc---------eeeEEEcc
Q psy11131 60 NPPLLSVHLDGSANFQCEIT-PY--DSGPYLIAWFKDGRQIPG-----------------RTS---------STSLVINP 110 (150)
Q Consensus 60 ~~~~~~~~~g~~~~l~C~~~-~p--~~~~~~~~w~~~~~~~~~-----------------~~~---------~~~l~~~~ 110 (150)
.+....+.+|+.+.|.|.+. .| ......+.|++++..... ... ...|.|.+
T Consensus 9 ~p~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~ 88 (248)
T 3pv7_A 9 AGGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPG 88 (248)
T ss_dssp TTSEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEESS
T ss_pred CCCCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeCC
Confidence 34556788999999999997 55 101225999886322110 000 34599999
Q ss_pred CCCCCCceEEEEEEeCCCCceeeeEEEEEcCcCccc
Q psy11131 111 VGREDRGIYQCIARRSDGDVAQGSAELQLGGTRNIK 146 (150)
Q Consensus 111 ~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p~~~ 146 (150)
+..+|.|.|.|.+.+..+ .....+.|.|..+|.+.
T Consensus 89 v~~~D~G~Y~C~~~~~~~-~~~~~~~L~V~~~P~v~ 123 (248)
T 3pv7_A 89 IQLEEAGEYRCEVVVTPL-KAQGTVQLEVVASPASR 123 (248)
T ss_dssp CCGGGCEEEEEEEEETTE-EEEEEEEEEEEBCCEEE
T ss_pred CCHHHCeEEEEEEEeCCc-cceeEEEEEEecCCceE
Confidence 999999999999999877 56777888888766543
No 387
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=98.93 E-value=1.1e-08 Score=63.52 Aligned_cols=79 Identities=16% Similarity=0.322 Sum_probs=56.8
Q ss_pred EeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccC--------------CCcc--------eeeEEEccCCCC
Q psy11131 58 DVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIP--------------GRTS--------STSLVINPVGRE 114 (150)
Q Consensus 58 ~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~--------------~~~~--------~~~l~~~~~~~~ 114 (150)
...+....+.+|+.+.|.|.+. .| .+.+.|++...... ...+ ...|.|.++..+
T Consensus 5 ~~~p~~~~v~~G~~v~L~C~~~~~~---~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 81 (213)
T 3r06_A 5 TQSPSSLPASLGDRVTINCQASQDI---SNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLESE 81 (213)
T ss_dssp EEECSEEEECTTCCEEEEEEESSCC---TTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred EeCCCEEEecCCCcEEEEEEeCCCc---CceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCcc
Confidence 3345667889999999999999 87 89999987321100 0011 347999999999
Q ss_pred CCceEEEEEEeCCCCceeeeEEEEE
Q psy11131 115 DRGIYQCIARRSDGDVAQGSAELQL 139 (150)
Q Consensus 115 ~~g~y~C~~~~~~g~~~~~~~~l~v 139 (150)
|+|.|.|.+.+..+........|.|
T Consensus 82 D~G~Y~C~~~~~~~~~~~~~~~l~V 106 (213)
T 3r06_A 82 DIGSYYCQQYYNYPWTFGPGTKLEI 106 (213)
T ss_dssp GCSEEEEEECSSSSCEECCCEEEEE
T ss_pred cCEEEEEecccCCceEEcCCceEEE
Confidence 9999999998865433444455666
No 388
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=98.92 E-value=1.6e-08 Score=62.83 Aligned_cols=60 Identities=12% Similarity=0.197 Sum_probs=50.7
Q ss_pred cEEEecCCcEEEEEEec--CCCCCCcEEEEeecCcccCCCcc----------eeeEEEccCCCCCCceEEEEEEe
Q psy11131 63 LLSVHLDGSANFQCEIT--PYDSGPYLIAWFKDGRQIPGRTS----------STSLVINPVGREDRGIYQCIARR 125 (150)
Q Consensus 63 ~~~~~~g~~~~l~C~~~--~p~~~~~~~~w~~~~~~~~~~~~----------~~~l~~~~~~~~~~g~y~C~~~~ 125 (150)
...+.+|..+.|.|.+. .| .|.+.|++++..+..... ...|.|.++..+|.|.|+|.+.|
T Consensus 11 ~~~v~eg~~v~l~c~~~~~~P---~p~i~W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~N 82 (207)
T 3rbs_A 11 AVEILEKGQVRFWMQAEKLSG---NAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQD 82 (207)
T ss_dssp EEEECGGGCEEEEEECSCCCS---CCEEEEEETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEEE
T ss_pred ceEEEeCCeEEEEEEEecCCC---CCEEEEEECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEEC
Confidence 45688999999999986 68 899999999988754332 23699999999999999999999
No 389
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=98.92 E-value=6.5e-09 Score=64.18 Aligned_cols=77 Identities=14% Similarity=0.141 Sum_probs=58.4
Q ss_pred EEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCC-------------------Ccc-----eeeEEEccCCCCCCce
Q psy11131 64 LSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPG-------------------RTS-----STSLVINPVGREDRGI 118 (150)
Q Consensus 64 ~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~-------------------~~~-----~~~l~~~~~~~~~~g~ 118 (150)
..+.+|+.+.|.|... .+ .+.+.|++++..... ..+ ...|.|.++...|.|.
T Consensus 9 ~~v~~G~~v~L~C~~~~~~---~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D~G~ 85 (208)
T 3r4d_A 9 PQVAEDNNVLLLVHNLPLA---LGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQMITMKDMGV 85 (208)
T ss_dssp SEEETTCCEEEEEECCCSS---CSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTTSCEEECSCCGGGCEE
T ss_pred ceeecCCcEEEEEeCCCCC---ceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecCCeEEEccccccCCeE
Confidence 4678999999999977 77 889999976432110 001 2479999999999999
Q ss_pred EEEEEEeCCCCceeeeEEEEEcCcC
Q psy11131 119 YQCIARRSDGDVAQGSAELQLGGTR 143 (150)
Q Consensus 119 y~C~~~~~~g~~~~~~~~l~v~~~p 143 (150)
|.|.+.+..+......+.|.|..++
T Consensus 86 Y~C~~~~~~~~~~~~~~~l~V~~~~ 110 (208)
T 3r4d_A 86 YTLDMTDENYRRTQATVRFHVHQPV 110 (208)
T ss_dssp EEEEEECSSCEEEEEEEEEEEECCC
T ss_pred EEEEEEcccCceeEEEEEEEeccCC
Confidence 9999998864456777788887654
No 390
>2edo_A CD48 antigen; beta-sandwich, IG-fold, B-lymphocyte activation marker blast-1, BCM1 surface antigen, leukocyte antigen MEM-102, TCT.1; NMR {Homo sapiens}
Probab=98.91 E-value=8.7e-09 Score=58.72 Aligned_cols=80 Identities=18% Similarity=0.190 Sum_probs=59.0
Q ss_pred cEEEecCCcEEEEEEec--CCCCCCcEEEEeecCc-cc------------C-CCcc------eeeEEEccCCCCCCceEE
Q psy11131 63 LLSVHLDGSANFQCEIT--PYDSGPYLIAWFKDGR-QI------------P-GRTS------STSLVINPVGREDRGIYQ 120 (150)
Q Consensus 63 ~~~~~~g~~~~l~C~~~--~p~~~~~~~~w~~~~~-~~------------~-~~~~------~~~l~~~~~~~~~~g~y~ 120 (150)
...+.+|+.+.|.|... .+ ...+.|++... .+ . ...+ ...|.|.+++.+|+|.|.
T Consensus 13 pv~~~~G~~VtL~c~~~~~~~---~~~i~W~~~~~~~i~~~~~~~~~~~~~~f~~R~~l~~~~~sL~I~nv~~~DsG~Y~ 89 (121)
T 2edo_A 13 HMTVVSGSNVTLNISESLPEN---YKQLTWFYTFDQKIVEWDSRKSKYFESKFKGRVRLDPQSGALYISKVQKEDNSTYI 89 (121)
T ss_dssp CCEEETTSCEEECCSSCCCSS---EEEEEEEEETTEEEEEECSSCEEECSCTTTTTCEECTTTCCEEESSCCGGGCSEEE
T ss_pred EEEEEeCCCEEEeCCCCCCCc---eeEEEEEcCCCCeEEEEECcCCeEeChhcCCcEEEeCCCceEEEeCCCHHHCeEEE
Confidence 35788999999999874 44 67899988642 10 0 0001 468999999999999999
Q ss_pred EEEEeCCCCceeeeEEEEEcCcCcc
Q psy11131 121 CIARRSDGDVAQGSAELQLGGTRNI 145 (150)
Q Consensus 121 C~~~~~~g~~~~~~~~l~v~~~p~~ 145 (150)
|.+.+..+......+.|.|.++++.
T Consensus 90 c~v~~~~~~~~~~~~~L~V~~~~~~ 114 (121)
T 2edo_A 90 MRVLKKTGNEQEWKIKLQVLDPVPK 114 (121)
T ss_dssp EEEEETTTEEEECCEECEEECCSCC
T ss_pred EEEEcCCCcEEEEEEEEEEECCCCC
Confidence 9999776545677888888876543
No 391
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=98.90 E-value=1.1e-08 Score=63.49 Aligned_cols=79 Identities=16% Similarity=0.378 Sum_probs=56.1
Q ss_pred EeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecC--cccC------------CCcc--------eeeEEEccCCCC
Q psy11131 58 DVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDG--RQIP------------GRTS--------STSLVINPVGRE 114 (150)
Q Consensus 58 ~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~--~~~~------------~~~~--------~~~l~~~~~~~~ 114 (150)
...+....+.+|+.+.|.|.+. .| .+.+.|+++. .... ...+ ...|.|.++..+
T Consensus 5 ~~~p~~~~v~~G~~v~L~C~~~~~~---~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 81 (213)
T 3nl4_L 5 TQTPASVSEPVGGTVTIKCQASQSI---SSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLECA 81 (213)
T ss_dssp EEECSEEEEETTCCEEEEEEESSCC---TTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGG
T ss_pred EeCCCeEEEcCCCCEEEEEEecCCC---CceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCChH
Confidence 3445667889999999999999 88 8999998842 1110 0011 347999999999
Q ss_pred CCceEEEEEEeCCCC--ceeeeEEEEE
Q psy11131 115 DRGIYQCIARRSDGD--VAQGSAELQL 139 (150)
Q Consensus 115 ~~g~y~C~~~~~~g~--~~~~~~~l~v 139 (150)
|+|.|.|.+.+..+. .......+.|
T Consensus 82 D~G~Y~C~~~~~~~~~~~~~~~~~l~V 108 (213)
T 3nl4_L 82 DAATYYCQSTYENPTYVSFGGGTEVGV 108 (213)
T ss_dssp GCEEEEEEECCSSTTTCEECCCEEEEE
T ss_pred HCEEEEEecCCCCceeEEeCCCeEEEE
Confidence 999999999986652 2333344555
No 392
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=98.90 E-value=9.9e-09 Score=64.31 Aligned_cols=81 Identities=27% Similarity=0.438 Sum_probs=61.6
Q ss_pred CCCcEEEecCCcEEEEEEec-CCCCCC-cEEEEeecCcccC-----------------C-----------CcceeeEEEc
Q psy11131 60 NPPLLSVHLDGSANFQCEIT-PYDSGP-YLIAWFKDGRQIP-----------------G-----------RTSSTSLVIN 109 (150)
Q Consensus 60 ~~~~~~~~~g~~~~l~C~~~-~p~~~~-~~~~w~~~~~~~~-----------------~-----------~~~~~~l~~~ 109 (150)
.|....+.+|+.+.|.|.+. .+ . +.+.|++++.... . ......|.|.
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~---~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~L~i~ 82 (231)
T 2pet_A 6 VPPLVEVMRGKSVILDCTPTGTH---DHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQGRLVLA 82 (231)
T ss_dssp CCSEEEEETTCCEEECCCCBSCC---SEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTCCEEES
T ss_pred CCCcEEEEcCCCEEEecccCCCC---CceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCCceEEEc
Confidence 35567889999999999998 66 5 8999997544311 0 0002459999
Q ss_pred cCCCCCCceEEEEEEeCC-CCceeeeEEEEEcCcCc
Q psy11131 110 PVGREDRGIYQCIARRSD-GDVAQGSAELQLGGTRN 144 (150)
Q Consensus 110 ~~~~~~~g~y~C~~~~~~-g~~~~~~~~l~v~~~p~ 144 (150)
++..+|.|.|.|.+.+.. + .....+.|.|..+|.
T Consensus 83 ~v~~~D~G~Y~C~~~~~~~~-~~~~~~~l~V~~~p~ 117 (231)
T 2pet_A 83 EAQVGDERDYVCVVRAGAAG-TAEATARLNVFAKPE 117 (231)
T ss_dssp SCCGGGCEEEEEEEECGGGC-EEEEEEEEEEEBCCC
T ss_pred ccCcccCceEEEEEEecCCC-ceEEEEEEEEEecCC
Confidence 999999999999999886 5 577788888877653
No 393
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=98.89 E-value=2.1e-08 Score=62.09 Aligned_cols=78 Identities=22% Similarity=0.403 Sum_probs=56.6
Q ss_pred CCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecC--ccc------------CCCcc--------eeeEEEccCCCCCCc
Q psy11131 61 PPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDG--RQI------------PGRTS--------STSLVINPVGREDRG 117 (150)
Q Consensus 61 ~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~--~~~------------~~~~~--------~~~l~~~~~~~~~~g 117 (150)
|....+.+|+.+.|.|.+. .| .+.+.|+++. ..+ ....+ ...|.|.++..+|.|
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~---~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 83 (210)
T 1lk3_L 7 PPALTVSPGEKLTISCKASESV---TSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDTA 83 (210)
T ss_dssp CSEEEECTTSCEEEEEEESSCC---TTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred CCcEEEcCCCCEEEEeeCCCcc---CCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHCe
Confidence 6667889999999999998 77 7889998742 211 00111 248999999999999
Q ss_pred eEEEEEEeCCCCceeeeEEEEEcC
Q psy11131 118 IYQCIARRSDGDVAQGSAELQLGG 141 (150)
Q Consensus 118 ~y~C~~~~~~g~~~~~~~~l~v~~ 141 (150)
.|.|.+.+..+........+.|..
T Consensus 84 ~Y~C~~~~~~~~~~~~~~~l~V~~ 107 (210)
T 1lk3_L 84 IYFCQQSWNGPLTFGAGTKLELKR 107 (210)
T ss_dssp EEEEEECSSSSCEECCCEEEEECC
T ss_pred EEEEEEEcCCCceeCCCEEEEEcC
Confidence 999999987663233344566654
No 394
>1zox_A CLM-1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, structural genomics, PSI, protein structure initiative; 2.10A {Mus musculus}
Probab=98.88 E-value=2.8e-08 Score=55.78 Aligned_cols=81 Identities=20% Similarity=0.320 Sum_probs=57.3
Q ss_pred CCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcc-----c-CC--------Ccc----------eeeEEEccCCCC
Q psy11131 60 NPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQ-----I-PG--------RTS----------STSLVINPVGRE 114 (150)
Q Consensus 60 ~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~-----~-~~--------~~~----------~~~l~~~~~~~~ 114 (150)
.|..+.+.+|+.+.|.|... ... ...+.|++.... + .. ..+ ...|.|.++..+
T Consensus 7 ~p~~v~~~~G~~v~L~C~~~~~~~--~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~~~~~ 84 (113)
T 1zox_A 7 GPEEVSGQEQGSLTVQCRYTSGWK--DYKKYWCQGVPQRSCKTLVETDASEQLVKKNRVSIRDNQRDFIFTVTMEDLRMS 84 (113)
T ss_dssp CCSEEEEETTSCEEEEEEECGGGT--TSCEEEEESSSGGGCEEEEECCSSSCCEEETTEEEEEETTTTEEEEEECSCCGG
T ss_pred CCCEEEEeCCCcEEEEeECCCCcc--cceEEEEeCCCCCCCeEEEEecCccccccCCCEEEEECCcCCEEEEEEccCCHH
Confidence 35567889999999999987 431 346999875321 1 00 001 347999999999
Q ss_pred CCceEEEEEEeCCCCceeeeEEEEEcCcC
Q psy11131 115 DRGIYQCIARRSDGDVAQGSAELQLGGTR 143 (150)
Q Consensus 115 ~~g~y~C~~~~~~g~~~~~~~~l~v~~~p 143 (150)
|+|.|.|.+.+... .....+.|.|..+|
T Consensus 85 DsG~Y~C~v~~~~~-~~~~~v~L~V~~~p 112 (113)
T 1zox_A 85 DAGIYWCGITKGGL-DPMFKVTVNIGPVP 112 (113)
T ss_dssp GCEEEEEEECCSSS-CCEEEEEEEEECC-
T ss_pred HCEEEEEeeEcCCC-CccEEEEEEEEcCC
Confidence 99999999987643 56777888887654
No 395
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=98.88 E-value=8e-09 Score=69.44 Aligned_cols=65 Identities=18% Similarity=0.093 Sum_probs=40.7
Q ss_pred CceEEeCCeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCceEEeCCCcEEEecCCcEEEEEEec-CCCCCCcEE
Q psy11131 10 PRTRVLGPILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLI 88 (150)
Q Consensus 10 ~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~ 88 (150)
.|+.+..++|.|.+++.+|+|.|+|.+.|..|..+..+.|.|...+ .+|+.+.+.|.+. .| .|.+
T Consensus 294 ~r~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~~-----------~~g~~~~l~C~~~g~P---~P~i 359 (361)
T 2xot_A 294 GSVSVRNGDLFFKKVQVEDGGVYTCYAMGETFNETLSVELKVYNFT-----------LHGHHDTLNAAADPWS---HPQF 359 (361)
T ss_dssp SSEEEETTEEEESSCCTTSCEEEEEEEECSSCEEEEEEEEEEESSC-----------CC---------------------
T ss_pred CceEeecCeEEEeecCcccCEEEEEEEecCCCccEEEEEEEEEeee-----------ccCCceEEEEEeCCCC---CCcc
Confidence 3666655899999999999999999999998988989999887532 5677899999998 88 6665
No 396
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=98.87 E-value=3.5e-09 Score=64.71 Aligned_cols=69 Identities=20% Similarity=0.401 Sum_probs=53.1
Q ss_pred EEecCCcEEEEEEecCCCCCCcEEEEeecCcccCCCcceeeEEEcc-CCCCCCceEEEEEEeCCCCceeeeEEEEE
Q psy11131 65 SVHLDGSANFQCEITPYDSGPYLIAWFKDGRQIPGRTSSTSLVINP-VGREDRGIYQCIARRSDGDVAQGSAELQL 139 (150)
Q Consensus 65 ~~~~g~~~~l~C~~~~p~~~~~~~~w~~~~~~~~~~~~~~~l~~~~-~~~~~~g~y~C~~~~~~g~~~~~~~~l~v 139 (150)
....|+.+.|.|.+..+ . .+.|++++..+.... ...|.|.+ +..+|+|.|.|.+.|..|. ....+.+.|
T Consensus 10 v~~~G~~v~L~C~~~~~---~-~i~W~k~g~~l~~~~-~~~L~I~~~~~~~D~G~Y~C~a~n~~g~-~~~~~~~~v 79 (186)
T 1jbj_A 10 VSISGTSVELTCPLDSD---E-NLKWEKNGQELPQKH-DKHLVLQDFSEVEDSGYYVCYTPASNKN-TYLYLKARV 79 (186)
T ss_dssp EEEETTEEEEECSSCCC---T-TCEEEETTEEECSCC-CSEEEEESCCTTTSCEEEEEECSSCCCC-CCEEECCCC
T ss_pred EEeCCcEEEEEEeCCCC---C-ceEEEECCEECCCCC-CCEEEECCCCccccCEEEEEEEEeCCCc-EEEEEEEEE
Confidence 34679999999998632 3 399999998876543 46899999 9999999999999998883 444444443
No 397
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=98.87 E-value=9e-09 Score=63.22 Aligned_cols=80 Identities=19% Similarity=0.243 Sum_probs=59.4
Q ss_pred CCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccC---C-----------Cc----c-----eeeEEEccCCCCCC
Q psy11131 61 PPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIP---G-----------RT----S-----STSLVINPVGREDR 116 (150)
Q Consensus 61 ~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~---~-----------~~----~-----~~~l~~~~~~~~~~ 116 (150)
|..+.+.+|+.+.|.|... .+. .+.+.|++++..+. . .. + ...|.|.++..+|.
T Consensus 5 p~~v~~~~G~~v~L~C~~~~~~~--~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~sL~I~~v~~~D~ 82 (193)
T 2if7_A 5 PLMVNGILGESVTLPLEFPAGEK--VNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFTQSYSLQLSNLKMEDT 82 (193)
T ss_dssp CEEEEEETTSCEEECCCCCCCSC--CCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEECTTCCEEECSCCGGGC
T ss_pred CeEEEEEecCeEEEeccCCCccc--ccEEEEEECCEEEEEEecccCCCCceeecCccccccEEECCCeEEEECCCCcccC
Confidence 4556788999999999986 331 57999998764321 0 00 1 35799999999999
Q ss_pred ceEEEEEEeCCCCceeeeEEEEEcCcC
Q psy11131 117 GIYQCIARRSDGDVAQGSAELQLGGTR 143 (150)
Q Consensus 117 g~y~C~~~~~~g~~~~~~~~l~v~~~p 143 (150)
|.|.|.+.+..+ .....+.|.|..++
T Consensus 83 G~Y~C~~~~~~~-~~~~~~~L~V~~~~ 108 (193)
T 2if7_A 83 GSYRAQISTKTS-AKLSSYTLRILRQL 108 (193)
T ss_dssp EEEEEEEECSSC-EEEEEEEEEEECCC
T ss_pred ceEEEEEEecCC-CeEEEEEEEEEccC
Confidence 999999998887 45567788887654
No 398
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=98.86 E-value=1.3e-08 Score=55.34 Aligned_cols=51 Identities=29% Similarity=0.446 Sum_probs=43.3
Q ss_pred ecCCCCceEEeCCeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCc
Q psy11131 5 LVLPGPRTRVLGPILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPY 55 (150)
Q Consensus 5 ~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~ 55 (150)
++..+.++.+..+.|.|.+++.+|+|.|+|.+.|..|.....+.|.|.+++
T Consensus 39 ~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~ 89 (95)
T 4hwu_A 39 HLGPNNRTVLIGEYLQIKGATPRDSGLYACTAARTVDSETWIFMVNVTDAA 89 (95)
T ss_dssp EECCCSSEEEETTEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECCC-
T ss_pred ECCCCceEEEeCCEEEECcCCcccCEEEEEEEccCCCcEEEEEEEEEeCCc
Confidence 445567778777899999999999999999999998888888888888653
No 399
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.86 E-value=2.2e-08 Score=60.68 Aligned_cols=73 Identities=21% Similarity=0.407 Sum_probs=54.1
Q ss_pred EEecCCcEEEEEEec-CCCCCCc--EEEEeecCcccCCCcc---eeeEEEccCCCCCCceEEEEEEeCCCCceeeeEEEE
Q psy11131 65 SVHLDGSANFQCEIT-PYDSGPY--LIAWFKDGRQIPGRTS---STSLVINPVGREDRGIYQCIARRSDGDVAQGSAELQ 138 (150)
Q Consensus 65 ~~~~g~~~~l~C~~~-~p~~~~~--~~~w~~~~~~~~~~~~---~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~ 138 (150)
.+.+|+.+.|.|.+. .| .+ .+.|++++..+..... ...+.+. ..+|.|.|.|.+.|. ....+.|.
T Consensus 9 ~v~~G~~v~l~C~~~~~~---~p~~~~~W~k~~~~l~~~~~~~~~~~l~i~--~~~d~G~Y~C~~~n~----~~~~~~l~ 79 (184)
T 3b5h_A 9 VEDLGSKILLTCSLNDSA---TEVTGHRWLKGGVVLKEDALPGQKTEFKVD--SDDQWGEYSCVFLPE----PMGTANIQ 79 (184)
T ss_dssp EEEETTEEEEEEEEESCS---SCCCEEEEESSSEEEECTTCCCSEEEEEEC--GGGCCEEEEEEEEST----TSCEEEEE
T ss_pred EEecCCCEEEEEECCCCC---CCceEEEEEeCCEEeecccccCCcEEEEEe--chhhCeEEEEEEECC----cCcEEEEE
Confidence 567899999999988 66 55 9999999877654432 3355555 578999999999972 23567777
Q ss_pred EcCcCccc
Q psy11131 139 LGGTRNIK 146 (150)
Q Consensus 139 v~~~p~~~ 146 (150)
|..+|...
T Consensus 80 V~~~P~~~ 87 (184)
T 3b5h_A 80 LHGPPRVK 87 (184)
T ss_dssp ECCSCCCE
T ss_pred EecCCcee
Confidence 87766543
No 400
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=98.86 E-value=1.5e-08 Score=62.63 Aligned_cols=84 Identities=20% Similarity=0.345 Sum_probs=61.3
Q ss_pred CcEEEecCCcEEEEEEec-CCCC-CCcEEEEeec----------------CcccCC-----Ccc-----------eeeEE
Q psy11131 62 PLLSVHLDGSANFQCEIT-PYDS-GPYLIAWFKD----------------GRQIPG-----RTS-----------STSLV 107 (150)
Q Consensus 62 ~~~~~~~g~~~~l~C~~~-~p~~-~~~~~~w~~~----------------~~~~~~-----~~~-----------~~~l~ 107 (150)
....+.+|+.+.|.|.+. .+.. ..+.+.|++. +..+.. ..+ ...|.
T Consensus 8 ~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~ 87 (214)
T 3jz7_A 8 QRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDASIN 87 (214)
T ss_dssp EEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCCEE
T ss_pred ceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCcccEE
Confidence 446788999999999998 5411 0369999873 222211 000 35699
Q ss_pred EccCCCCCCceEEEEEEeCCCCceeeeEEEEEcCcCccc
Q psy11131 108 INPVGREDRGIYQCIARRSDGDVAQGSAELQLGGTRNIK 146 (150)
Q Consensus 108 ~~~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p~~~ 146 (150)
|.++..+|.|.|.|.+.+..| .....+.|.|..+|...
T Consensus 88 i~~v~~~D~G~Y~C~~~~~~~-~~~~~~~l~V~~~p~~~ 125 (214)
T 3jz7_A 88 VTNLQLSDIGTYQCKVKKAPG-VANKKFLLTVLVKPSGT 125 (214)
T ss_dssp ECSCCGGGCEEEEEEEEETTE-EEEEEEEEEEECCCBSC
T ss_pred EccCChhhCeEEEEEEEeCCC-ccccEEEEEEEcCCCCc
Confidence 999999999999999999888 56788889988876543
No 401
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=98.86 E-value=2.9e-08 Score=61.39 Aligned_cols=71 Identities=17% Similarity=0.122 Sum_probs=55.7
Q ss_pred EEecCCcEEEEEEec--CCCCCCcEEEEeecCcccCCCcc--------eeeEEEccCCCCCCceEEEEEEeCCCCceeee
Q psy11131 65 SVHLDGSANFQCEIT--PYDSGPYLIAWFKDGRQIPGRTS--------STSLVINPVGREDRGIYQCIARRSDGDVAQGS 134 (150)
Q Consensus 65 ~~~~g~~~~l~C~~~--~p~~~~~~~~w~~~~~~~~~~~~--------~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~ 134 (150)
....++.+.|.|.+. .| .+.+.|++++..+..... ...|.|.++..+|.|.|.|.+.|..+ .....
T Consensus 13 l~c~~~~~~l~C~~~~~~p---~~~i~W~~~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~-~~~~~ 88 (212)
T 2r15_A 13 IQSTAEGIQLYSFVTYYVE---DLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKT-GHQKT 88 (212)
T ss_dssp EEECSSEEEEEEEBSSCCS---SCEEEEEETTEECCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSC-EEEEE
T ss_pred EEEcCceEEEEEEEeccCC---CceEEEEECCEEccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCc-ceEEE
Confidence 345678889999988 46 889999999988765443 24599999999999999999999877 45556
Q ss_pred EEEEE
Q psy11131 135 AELQL 139 (150)
Q Consensus 135 ~~l~v 139 (150)
+.+.+
T Consensus 89 ~~l~v 93 (212)
T 2r15_A 89 VDLSG 93 (212)
T ss_dssp EEECH
T ss_pred EEEEE
Confidence 66544
No 402
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=98.85 E-value=7.7e-09 Score=63.35 Aligned_cols=66 Identities=17% Similarity=0.235 Sum_probs=53.7
Q ss_pred CCCcEEEecCCcEEEEEE-ec-CCCCCC-cEEEEeecCcccCCC--cc------eeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 60 NPPLLSVHLDGSANFQCE-IT-PYDSGP-YLIAWFKDGRQIPGR--TS------STSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 60 ~~~~~~~~~g~~~~l~C~-~~-~p~~~~-~~~~w~~~~~~~~~~--~~------~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
.+....+.+|+.+.|.|. .. .| . +.+.|++++..+... .. ...|.|.++..+|.|.|.|.+.+..+
T Consensus 14 ~~~~~~v~~G~~v~L~C~~~~~~p---~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~ 90 (201)
T 3s97_C 14 ERPEVRVKEGKGMVLLCDPPYHFP---DDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSI 90 (201)
T ss_dssp CCCCEEEETTCCEEECCCCCSEES---SCCEEEEEESSTTCBCCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEEGGG
T ss_pred CCceEEEECCCCEEEeccccccCC---CceEEEEEECCceeeeeeCCCeEEEcCCCeEEECcCCcccCeEEEEEEEecCC
Confidence 345678899999999999 66 77 7 999999988766321 11 56799999999999999999998665
No 403
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=98.84 E-value=1.9e-08 Score=61.37 Aligned_cols=78 Identities=18% Similarity=0.202 Sum_probs=57.9
Q ss_pred CcEEEecCCcEEEEEEec---CCCCCCcEEEEee--cCccc----------CCCcc-----eeeEEEccCCCCCCceEEE
Q psy11131 62 PLLSVHLDGSANFQCEIT---PYDSGPYLIAWFK--DGRQI----------PGRTS-----STSLVINPVGREDRGIYQC 121 (150)
Q Consensus 62 ~~~~~~~g~~~~l~C~~~---~p~~~~~~~~w~~--~~~~~----------~~~~~-----~~~l~~~~~~~~~~g~y~C 121 (150)
..+.+.+|+.+.|.|... .+ .+.+.|.+ ++..+ ....+ ...|.|.++..+|+|.|.|
T Consensus 7 ~~v~g~~G~sv~L~~~~~~~~~~---~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~ngsL~I~~v~~~DsG~Y~c 83 (182)
T 1hnf_A 7 LETWGALGQDINLDIPSFQMSDD---IDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKNGTLKIKHLKTDDQDIYKV 83 (182)
T ss_dssp EEEEEETTSCEEECCTTCCCCSS---EEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECTTSCEEECSCCGGGCEEEEE
T ss_pred cEEEEecCCCEEEeCCcccccCc---CCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECCCCCEEECCCChhhCEEEEE
Confidence 345678999999999543 34 68999999 77654 11111 4689999999999999999
Q ss_pred EEEeCCCCce-eeeEEEEEcCc
Q psy11131 122 IARRSDGDVA-QGSAELQLGGT 142 (150)
Q Consensus 122 ~~~~~~g~~~-~~~~~l~v~~~ 142 (150)
.+.|..|... ...+.|.|..+
T Consensus 84 ~~~n~~g~~~~~~~~~L~V~~~ 105 (182)
T 1hnf_A 84 SIYDTKGKNVLEKIFDLKIQER 105 (182)
T ss_dssp EEEETTSCEEEEEEEEEEEECC
T ss_pred EEEeCCCceeEEEEEEEEEcCc
Confidence 9999887432 35677777653
No 404
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=98.84 E-value=2.7e-08 Score=63.11 Aligned_cols=83 Identities=23% Similarity=0.330 Sum_probs=57.4
Q ss_pred EeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCc--ccC------------CCcc--------eeeEEEccCCCC
Q psy11131 58 DVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGR--QIP------------GRTS--------STSLVINPVGRE 114 (150)
Q Consensus 58 ~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~--~~~------------~~~~--------~~~l~~~~~~~~ 114 (150)
...|....+.+|+.+.|.|.+. .| .+.+.|+++.. ... ...+ ...|.|.++..+
T Consensus 5 ~~~p~~~~v~~G~~v~L~C~~~~~~---~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 81 (242)
T 2znx_A 5 TQSPATLSVTPGNSVSLSCRASQSI---GNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETE 81 (242)
T ss_dssp EEECSEEEECTTCCEEEEEEESSCC---TTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGG
T ss_pred EEcCCeEEEcCCCcEEEEEEeCCCC---CceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChH
Confidence 3445667889999999999998 88 88999988531 110 0111 347999999999
Q ss_pred CCceEEEEEEeCCCCceeeeEEEEEcCcC
Q psy11131 115 DRGIYQCIARRSDGDVAQGSAELQLGGTR 143 (150)
Q Consensus 115 ~~g~y~C~~~~~~g~~~~~~~~l~v~~~p 143 (150)
|+|.|.|.+.+..+........|.|..+|
T Consensus 82 D~G~Y~C~~~n~~~~~~~~~~~L~V~~~~ 110 (242)
T 2znx_A 82 DFGMYFCQQSNSXPYTFGGGTKLEITGGG 110 (242)
T ss_dssp GCEEEEEEECSSSSCEECCCEEEEEC---
T ss_pred HCEEEEEeEecCCceEECCCEEEEEcCCC
Confidence 99999999998754222344567776654
No 405
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=98.83 E-value=7.8e-09 Score=64.37 Aligned_cols=77 Identities=12% Similarity=0.103 Sum_probs=53.7
Q ss_pred CcEEEecC--CcEEEEEEecCCCCCCcEEEEeec---CcccCCCcc-----eeeEEEccCCCCCCceEEEEEEeCCCCce
Q psy11131 62 PLLSVHLD--GSANFQCEITPYDSGPYLIAWFKD---GRQIPGRTS-----STSLVINPVGREDRGIYQCIARRSDGDVA 131 (150)
Q Consensus 62 ~~~~~~~g--~~~~l~C~~~~p~~~~~~~~w~~~---~~~~~~~~~-----~~~l~~~~~~~~~~g~y~C~~~~~~g~~~ 131 (150)
..+.+.+| +.+.|.|.+..| .+.+.|++. +..+..... ...|.|.++..+|.|.|.|.+.|..+...
T Consensus 15 ~~v~v~eG~~~~v~L~C~~~~p---~~~v~w~~~~~~g~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~n~~~~~~ 91 (213)
T 2x1w_L 15 GVVYITENKNKTVVIPCLGSIS---NLNVSLCARYPEKRFVPDGNRISWDSKKGFTIPSYMISYAGMVFCEAKINDESYQ 91 (213)
T ss_dssp EEEEECCSTTCEEEECCCBSST---TCCEEEEEETTTEEECCCSSSCEEETTTEEEEEGGGTTTCSEEEEEEC----CEE
T ss_pred eEEEEecCCCccEEEeeccCCC---CcEEEEEhhcCCCccccCCCcccccCCccEEEccCChhcCceEEEEEEECCeeEE
Confidence 45678899 999999998766 688999874 444433221 35699999999999999999988544333
Q ss_pred eeeEEEEEcC
Q psy11131 132 QGSAELQLGG 141 (150)
Q Consensus 132 ~~~~~l~v~~ 141 (150)
+..+.+.|..
T Consensus 92 s~~~~l~v~~ 101 (213)
T 2x1w_L 92 SIMYIVVVVG 101 (213)
T ss_dssp CCCEEEEECB
T ss_pred EEEEEEEEeC
Confidence 3346666643
No 406
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=98.82 E-value=3.7e-08 Score=60.79 Aligned_cols=83 Identities=16% Similarity=0.207 Sum_probs=56.0
Q ss_pred CCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCc-----------------------------ceeeEEEc
Q psy11131 60 NPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRT-----------------------------SSTSLVIN 109 (150)
Q Consensus 60 ~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~-----------------------------~~~~l~~~ 109 (150)
.+..+.+.+|+.+.|.|.+. .|....+.+.|++++..+.... ....|.|.
T Consensus 5 ~p~~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~ 84 (218)
T 4frw_A 5 TSDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLR 84 (218)
T ss_dssp CCSEEEEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEES
T ss_pred CCCeEEEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEe
Confidence 35567889999999999998 6511013589998764322100 03469999
Q ss_pred cCCCCCCceEEEEEEeCCCCceeeeEEEEEcCc
Q psy11131 110 PVGREDRGIYQCIARRSDGDVAQGSAELQLGGT 142 (150)
Q Consensus 110 ~~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~ 142 (150)
++..+|.|.|.|.+.+..+........+.+..+
T Consensus 85 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~ 117 (218)
T 4frw_A 85 NAVQADEGEYECRVSTFPAGSFQARLRLRVLVP 117 (218)
T ss_dssp SCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBC
T ss_pred eccHHHCCceeEEEEeccCceeeeEEEEEEeee
Confidence 999999999999998866633444444444443
No 407
>2or8_A Hepatitis A virus cellular receptor 1 homolog; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 2.50A {Mus musculus}
Probab=98.81 E-value=1.9e-08 Score=56.59 Aligned_cols=77 Identities=14% Similarity=0.124 Sum_probs=52.3
Q ss_pred CCcEEEecCCcEEEEEEec--CCCCCCcEEEEeecCccc-----------------CCCcc----------eeeEEEccC
Q psy11131 61 PPLLSVHLDGSANFQCEIT--PYDSGPYLIAWFKDGRQI-----------------PGRTS----------STSLVINPV 111 (150)
Q Consensus 61 ~~~~~~~~g~~~~l~C~~~--~p~~~~~~~~w~~~~~~~-----------------~~~~~----------~~~l~~~~~ 111 (150)
+..+.+.+|+.+.|.|... .. ...+.|++..... ....+ ...|.|.++
T Consensus 4 ~~~v~~~~G~~v~L~C~~~~~~~---~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v 80 (116)
T 2or8_A 4 YVEVKGVVGHPVTLPCTYSTYRG---ITTTCWGRGQCPSSACQNTLIWTNGHRVTYQKSSRYNLKGHISEGDVSLTIENS 80 (116)
T ss_dssp CEEEEEETTSCEEECCBCCCTTC---CCCEEEEESCCCSSSCTTEEEEECSSSEEEESSTTEECCSCGGGTBCCEEESSC
T ss_pred cceEEEEeCCcEEEEEEeeCCCC---CcEEEEEEECCCCCCceEEEEEeCCcccCcCCCCeEEEecCCCCCeEEEEECCC
Confidence 3456788999999999986 33 5679998864110 00000 357999999
Q ss_pred CCCCCceEEEEEEeCCCCc-eeeeEEEEEc
Q psy11131 112 GREDRGIYQCIARRSDGDV-AQGSAELQLG 140 (150)
Q Consensus 112 ~~~~~g~y~C~~~~~~g~~-~~~~~~l~v~ 140 (150)
..+|+|.|.|.+.+..+.. ....+.|.|.
T Consensus 81 ~~~DsG~Y~C~v~~~~~~~~~~~~~~l~V~ 110 (116)
T 2or8_A 81 VESDSGLYCCRVEIPGWFNDQKVTFSLQVK 110 (116)
T ss_dssp CGGGCEEEEEEECCSSTTCCEEEEEEEEEE
T ss_pred CcccCEEEEEEEEcCCcccccEEEEEEEEC
Confidence 9999999999998765421 2445555553
No 408
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=98.81 E-value=3.5e-08 Score=61.12 Aligned_cols=74 Identities=18% Similarity=0.309 Sum_probs=55.6
Q ss_pred cEEEecCCcEEEEEEecCCCCCCcEEEEeec--CcccC------------CCcc--------eeeEEEccCCCCCCceEE
Q psy11131 63 LLSVHLDGSANFQCEITPYDSGPYLIAWFKD--GRQIP------------GRTS--------STSLVINPVGREDRGIYQ 120 (150)
Q Consensus 63 ~~~~~~g~~~~l~C~~~~p~~~~~~~~w~~~--~~~~~------------~~~~--------~~~l~~~~~~~~~~g~y~ 120 (150)
...+.+|+.+.|.|.+. + .+.+.|++. +.... ...+ ...|.|.++..+|+|.|.
T Consensus 9 ~~~v~~G~~v~L~C~~~-~---~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 84 (211)
T 3tv3_L 9 SASGSPGQSITISCTGT-S---NNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDDEAVYY 84 (211)
T ss_dssp EEEECTTCEEEEEEECC-C---SSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGGCEEEE
T ss_pred eEEEcCCCCEEEEEEEC-C---CCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhHCEEEE
Confidence 67788999999999997 7 889999984 22110 0011 347999999999999999
Q ss_pred EEEEeCCC-CceeeeEEEEEc
Q psy11131 121 CIARRSDG-DVAQGSAELQLG 140 (150)
Q Consensus 121 C~~~~~~g-~~~~~~~~l~v~ 140 (150)
|.+.+..+ ........|.|.
T Consensus 85 C~~~~~~~~~~~~~~~~l~V~ 105 (211)
T 3tv3_L 85 CGSLVGNWDVIFGGGTKLTVL 105 (211)
T ss_dssp EEEEETTTEEEECCCEEEEEC
T ss_pred EEEecCCCceeECCCceEEEe
Confidence 99999876 234555677776
No 409
>4esk_A LAIR-1, mlair1, leukocyte-associated immunoglobulin-like receptor; IG-like domain, domain swapping, collagen receptor, structural genomics; 1.76A {Mus musculus}
Probab=98.80 E-value=1.3e-07 Score=52.24 Aligned_cols=74 Identities=19% Similarity=0.246 Sum_probs=55.9
Q ss_pred EEEecCCcEEEEEEecCCCCCC----cEEEEeecCcccCC-----CcceeeEEEccCCCCCCceEEEEEEeCCC-Cceee
Q psy11131 64 LSVHLDGSANFQCEITPYDSGP----YLIAWFKDGRQIPG-----RTSSTSLVINPVGREDRGIYQCIARRSDG-DVAQG 133 (150)
Q Consensus 64 ~~~~~g~~~~l~C~~~~p~~~~----~~~~w~~~~~~~~~-----~~~~~~l~~~~~~~~~~g~y~C~~~~~~g-~~~~~ 133 (150)
..+..|+.+.|.| .... . ..+.|++++..... ......|.|..+...|+|.|.|.+.+..+ ...+.
T Consensus 18 ~~v~~G~~VTL~C-~~~~---~~~~~~~f~l~k~g~~~~~~~~~~~~~~a~f~i~~vt~~~aG~Y~C~~~~~~~~S~~Sd 93 (102)
T 4esk_A 18 LMISQGTFVTVVC-SYSD---KHDLYNMVRLEKDGSTFMEKSTEPYKTEDEFEIGPVNETITGHYSCIYSKGITWSERSK 93 (102)
T ss_dssp EEEETTCCEEEEE-ECTT---TGGGCCEEEEEETTEEEEEEECCSSCSEEEEEECSCCGGGCEEEEEEEEETTTEEEECC
T ss_pred CcccCCCcEEEEE-CCCc---CCCcccEEEEEECCccccccccCCCCcceEEEeCcCCcccCeeEEEEEeCCCccccCcC
Confidence 4578899999999 7633 4 68999988764321 11157899999999999999999998765 24567
Q ss_pred eEEEEEcC
Q psy11131 134 SAELQLGG 141 (150)
Q Consensus 134 ~~~l~v~~ 141 (150)
.+.|.|.+
T Consensus 94 pl~L~VtG 101 (102)
T 4esk_A 94 TLELKVIK 101 (102)
T ss_dssp CEEEEEEC
T ss_pred CEEEEEEe
Confidence 78887764
No 410
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=98.80 E-value=1.3e-09 Score=71.22 Aligned_cols=122 Identities=8% Similarity=0.075 Sum_probs=22.5
Q ss_pred eEEEcCCCCCCCeEEEEEeccCCcc--------eeEEEEEEEecCceEE--eCCCcEEEecCCcEEEEEEec-CCCCCCc
Q psy11131 18 ILAIEGVTAEDSGTYRCSSSNIGGE--------ATAEVRLQVSTPYRVD--VNPPLLSVHLDGSANFQCEIT-PYDSGPY 86 (150)
Q Consensus 18 ~l~i~~~~~~d~G~Y~C~~~~~~~~--------~~~~~~l~v~~~~~~~--~~~~~~~~~~g~~~~l~C~~~-~p~~~~~ 86 (150)
.|.+...+..|.+.|+|++.+..+. .+....|.|+++|... +.. ...+.+|+.+.|.|.+. .+. .+
T Consensus 143 ~l~~~~~~~D~g~~~~C~A~~~l~~~g~~l~~~~s~~~~L~V~~~P~~~~~~~~-p~~l~eG~~v~l~C~~~g~~P--~~ 219 (291)
T 1mq8_A 143 TTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVS-PRVLEVDTQGTVVCSLDGLFP--VS 219 (291)
T ss_dssp EEECCCSSSCSSCEEEEEEEEECGGGTSCEEEECCCCEECBC--------------------------------------
T ss_pred EEEeeeeeccCCceEEEEEEecCCccCCccccccccceEEEEEecCCCCceecC-CcCccCCCeEEEEEEcCCCCC--Cc
Confidence 4556555555566999999976441 3455678887764321 111 12577899999999999 540 32
Q ss_pred --EEEEeecCcccCCCcc--eeeEEEccC---CCCC--CceEEEEEEeCCCCceeeeEEEEEcCcC
Q psy11131 87 --LIAWFKDGRQIPGRTS--STSLVINPV---GRED--RGIYQCIARRSDGDVAQGSAELQLGGTR 143 (150)
Q Consensus 87 --~~~w~~~~~~~~~~~~--~~~l~~~~~---~~~~--~g~y~C~~~~~~g~~~~~~~~l~v~~~p 143 (150)
.+.|.+++..+..... ...+.+... ..++ .+.|.|.+.+... .......|.|+.-|
T Consensus 220 ~~~v~w~~~g~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~-~~~~~~~l~v~~~~ 284 (291)
T 1mq8_A 220 EAQVHLALGDQRLNPTVTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQ-SQETLQTVTIYSFP 284 (291)
T ss_dssp ------------------------------------------------------------------
T ss_pred ccEEEEEECCEecCceeeecCCeEEEEEecceeEcCCCCEEEEEEEEeCCc-ceEEEEEEEEEcCC
Confidence 6889888887653211 223333322 2333 4567798886543 34456667777633
No 411
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=98.80 E-value=8.4e-08 Score=60.74 Aligned_cols=80 Identities=21% Similarity=0.343 Sum_probs=59.4
Q ss_pred CCCcEEEecCCcEEEEEEec----CCCCCCcEEEEeecCcccC------------------------------CCcc---
Q psy11131 60 NPPLLSVHLDGSANFQCEIT----PYDSGPYLIAWFKDGRQIP------------------------------GRTS--- 102 (150)
Q Consensus 60 ~~~~~~~~~g~~~~l~C~~~----~p~~~~~~~~w~~~~~~~~------------------------------~~~~--- 102 (150)
.+....+.+|+.+.|.|.+. .| .+.+.|++++.... ...+
T Consensus 8 ~~~~v~v~~G~~v~L~C~~~~~~~~~---~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 84 (250)
T 2fbo_J 8 THTEVEVHAGGTVELPCSYQLANDTQ---PPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASV 84 (250)
T ss_dssp SCSEEEECTTSCEEECCEEEECSCCS---CCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEEC
T ss_pred CCCceEEecCCeEEEEEEeEcCCCCC---ceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEe
Confidence 34467788999999999886 45 78999998764320 0000
Q ss_pred ----eeeEEEccCCCCCCceEEEEEEeCCCCc----eeeeEEEEEcCc
Q psy11131 103 ----STSLVINPVGREDRGIYQCIARRSDGDV----AQGSAELQLGGT 142 (150)
Q Consensus 103 ----~~~l~~~~~~~~~~g~y~C~~~~~~g~~----~~~~~~l~v~~~ 142 (150)
...|.|.++..+|.|.|.|.+.+..+.. ....+.|.|..+
T Consensus 85 ~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~ 132 (250)
T 2fbo_J 85 ANLAAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGH 132 (250)
T ss_dssp SCTTSCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTT
T ss_pred ccCCcceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEecc
Confidence 2489999999999999999999876632 245788888875
No 412
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=98.80 E-value=2e-08 Score=61.76 Aligned_cols=76 Identities=20% Similarity=0.354 Sum_probs=56.8
Q ss_pred EEEecCCcEEEEEEec-----CCCCCCcEEEEeecCcccCC-------------------CcceeeEEEccCCCCCCceE
Q psy11131 64 LSVHLDGSANFQCEIT-----PYDSGPYLIAWFKDGRQIPG-------------------RTSSTSLVINPVGREDRGIY 119 (150)
Q Consensus 64 ~~~~~g~~~~l~C~~~-----~p~~~~~~~~w~~~~~~~~~-------------------~~~~~~l~~~~~~~~~~g~y 119 (150)
+.+.+|+.+.|.|.+. .| .+.+.|.+++..+.. ......|.|.++..+|.|.|
T Consensus 4 v~v~~G~~v~L~C~~~~~~~~~~---~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~~~~~~~L~I~~v~~~D~G~Y 80 (201)
T 1dr9_A 4 VTKEVKEVATLSCGHNVSVEELA---QTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFDITNNLSIVILALRPSDEGTY 80 (201)
T ss_dssp EEEETTSCEEECCSCCCCTTHHH---HCEEEEEETTEEEEEEETTEEEECHHHHTTEEEESTTTTEEEECSCCGGGCEEE
T ss_pred EEEEeCCCEEEecccCCCccccc---ccEEEEEeCCcEEEEEeCCceeecCcccceeEEccCCCcEEEEecccchhCeEE
Confidence 5678999999999985 24 678999988765410 00135799999999999999
Q ss_pred EEEEEeCCCCce----eeeEEEEEcCc
Q psy11131 120 QCIARRSDGDVA----QGSAELQLGGT 142 (150)
Q Consensus 120 ~C~~~~~~g~~~----~~~~~l~v~~~ 142 (150)
.|.+.+..|... ...+.|.|..+
T Consensus 81 ~C~~~~~~g~~~~~~~~~~~~l~V~~~ 107 (201)
T 1dr9_A 81 ECVVLKYEKDAFKREHLAEVTLSVKAD 107 (201)
T ss_dssp EEEEEECCTTSCEEEEEEEEEEEEECC
T ss_pred EEEEEcCCCCccccccccEEEEEEcCC
Confidence 999999776332 35677777665
No 413
>1mqk_L Antibody 7E2 FV fragment, light chain; membrane protein, cytochrome C oxidase, high- resolution structure, immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB: 1ar1_D 3ehb_D* 3hb3_D* 1qle_L* 1f6l_L 3iy2_A 1vfa_A 1dvf_A 1kir_A 1g7i_A 1g7j_A 1a2y_A 1kip_A 1kiq_A 1vfb_A 1g7h_A 1a7o_L 1g7l_A 1g7m_A 1a7n_L ...
Probab=98.80 E-value=8.6e-08 Score=54.46 Aligned_cols=80 Identities=21% Similarity=0.333 Sum_probs=54.2
Q ss_pred eCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecC--cccC------------CCcc--------eeeEEEccCCCCC
Q psy11131 59 VNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDG--RQIP------------GRTS--------STSLVINPVGRED 115 (150)
Q Consensus 59 ~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~--~~~~------------~~~~--------~~~l~~~~~~~~~ 115 (150)
..|....+.+|+.+.|.|... .+ .+.+.|++.. .... ...+ ...|.|.++..+|
T Consensus 6 q~p~~~~v~~G~~v~L~C~~~~~~---~~~v~W~r~~~g~~~~~li~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~D 82 (120)
T 1mqk_L 6 QTPVSLSASVGETVTITCRASENI---YSYLAWYQQKQGKSPQFLVYNAKTLGEGVPSRFSGSGSGTQFSLKINSLLPED 82 (120)
T ss_dssp EECSEEEECTTCCEEEEEEESSCC---TTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred ecCCeEEEcCCCcEEEEEEeCCCC---CceEEEEEECCCCCCEEEEEeCCcCCCCCCceEEEeccCCEEEEEECCCCHHH
Confidence 345667889999999999998 77 7889999853 2110 0111 3479999999999
Q ss_pred CceEEEEEEeCC-CCceeeeEEEEEcC
Q psy11131 116 RGIYQCIARRSD-GDVAQGSAELQLGG 141 (150)
Q Consensus 116 ~g~y~C~~~~~~-g~~~~~~~~l~v~~ 141 (150)
+|.|.|.+.+.. ......-..|.|..
T Consensus 83 sG~Y~C~~~~~~~~~~fg~gt~L~V~~ 109 (120)
T 1mqk_L 83 FGSYYCQHHYGTPPLTFGGGTKLEIKR 109 (120)
T ss_dssp CEEEEEEECSSSSSCCBCCCEEEEEC-
T ss_pred CEEEEEEEEeCCCceEECCCeEEEEec
Confidence 999999998753 11122333555544
No 414
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=98.79 E-value=6.8e-08 Score=60.74 Aligned_cols=80 Identities=15% Similarity=0.307 Sum_probs=56.1
Q ss_pred EEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCc--cc------------CCCcc--------eeeEEEccCCC
Q psy11131 57 VDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGR--QI------------PGRTS--------STSLVINPVGR 113 (150)
Q Consensus 57 ~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~--~~------------~~~~~--------~~~l~~~~~~~ 113 (150)
+...+....+.+|+.+.|.|.+. .+ .+.+.|++... .. ....+ ...|.|.++..
T Consensus 27 v~~~p~~~~v~~G~~v~L~C~~~~~~---~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 103 (237)
T 3sob_L 27 MTQSPSSLSASVGDRVTITCRASQDV---STAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQP 103 (237)
T ss_dssp EEEECSEEEEETTCCEEEEEEESSCC---TTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred EEeCCCeEEEeCCCcEEEEEecCCCC---CceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCCh
Confidence 33445667889999999999998 87 88999987421 10 00011 35799999999
Q ss_pred CCCceEEEEEEeCCCCceeeeEEEEE
Q psy11131 114 EDRGIYQCIARRSDGDVAQGSAELQL 139 (150)
Q Consensus 114 ~~~g~y~C~~~~~~g~~~~~~~~l~v 139 (150)
+|+|.|.|.+.+..+........+.|
T Consensus 104 ~D~G~Y~C~~~~~~~~~~~~~~~l~V 129 (237)
T 3sob_L 104 EDFATYYCQQSYTTPPTFGQGTKVEI 129 (237)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEE
T ss_pred hhCeEEEEeeccCCceEEcCcEEEEE
Confidence 99999999998765422333345555
No 415
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=98.79 E-value=2.5e-08 Score=62.03 Aligned_cols=80 Identities=23% Similarity=0.383 Sum_probs=56.4
Q ss_pred EeCCCcEEEecCCcEEEEEEec-C-CCCCCcEEEEeecC--ccc------CC--------C--cc--------eeeEEEc
Q psy11131 58 DVNPPLLSVHLDGSANFQCEIT-P-YDSGPYLIAWFKDG--RQI------PG--------R--TS--------STSLVIN 109 (150)
Q Consensus 58 ~~~~~~~~~~~g~~~~l~C~~~-~-p~~~~~~~~w~~~~--~~~------~~--------~--~~--------~~~l~~~ 109 (150)
...+ ...+.+|+.+.|.|.+. . | .+.+.|++.. ... .. . .+ ...|.|.
T Consensus 5 ~~~p-~~~v~~G~~v~L~C~~~~~~~---~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~ 80 (218)
T 3s96_B 5 TQSS-SASFSLGASAKLTCTLNSQHS---TYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSIS 80 (218)
T ss_dssp ECCS-EEEEETTSCEEEEEEECGGGT---TCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEES
T ss_pred EeCC-cEEECCCCcEEEEEECCCCCC---CcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEc
Confidence 3344 67889999999999999 7 8 8999998832 100 00 0 01 3469999
Q ss_pred cCCCCCCceEEEEEEeCCC----CceeeeEEEEEcC
Q psy11131 110 PVGREDRGIYQCIARRSDG----DVAQGSAELQLGG 141 (150)
Q Consensus 110 ~~~~~~~g~y~C~~~~~~g----~~~~~~~~l~v~~ 141 (150)
++..+|.|.|.|.+.+..| ........|.|..
T Consensus 81 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~ 116 (218)
T 3s96_B 81 NIQPEDEAIYICGVGDTIKEQFVYVFGGGTKVTVLG 116 (218)
T ss_dssp SCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEES
T ss_pred cCCcccCEEEEEEEecCCCCceeEEEcCcEEEEEec
Confidence 9999999999999998764 1223345666663
No 416
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.78 E-value=2.3e-08 Score=56.19 Aligned_cols=51 Identities=25% Similarity=0.277 Sum_probs=41.8
Q ss_pred cCCCCceEEe----CCeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCce
Q psy11131 6 VLPGPRTRVL----GPILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYR 56 (150)
Q Consensus 6 ~~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~ 56 (150)
+..+.++.+. ...|.|.++..+|+|.|+|.+.|..|.....+.|.|.+.|.
T Consensus 48 ~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~ 102 (114)
T 2cqv_A 48 IQESEHMKVENSENGSKLTILAARQEHCGCYTLLVENKLGSRQAQVNLTVVDKPD 102 (114)
T ss_dssp CCCSSSEEEEECSSEEEEEETTCCTTTCEEEEEEEECSSCEEECCEEEEEECSCS
T ss_pred CcCCCCEEEEEcCCEEEEEECCCChhcCEEEEEEEEECCCcEEEEEEEEEECCCC
Confidence 3344566665 26799999999999999999999999888889999987654
No 417
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=98.78 E-value=3.7e-08 Score=62.60 Aligned_cols=82 Identities=18% Similarity=0.288 Sum_probs=57.9
Q ss_pred EEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCccc--------------CCCcc--------eeeEEEccCCC
Q psy11131 57 VDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQI--------------PGRTS--------STSLVINPVGR 113 (150)
Q Consensus 57 ~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~--------------~~~~~--------~~~l~~~~~~~ 113 (150)
+...+....+.+|+.+.|.|.+. .| .+.+.|++..... ....+ ...|.|.++..
T Consensus 7 v~~~p~~~~v~~G~~v~L~C~~~~~~---~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 83 (250)
T 3esu_F 7 LIQSTSSLSASLGDRVTISCRASQDI---RNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQ 83 (250)
T ss_dssp EECSCSEEEECTTCCEEEEEEESSCC---TTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred EEecCCEEEeeCCCcEEEEEEecccC---CceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCCh
Confidence 33456667789999999999999 88 8899999853110 00011 23799999999
Q ss_pred CCCceEEEEEEeCCCCceeeeEEEEEcC
Q psy11131 114 EDRGIYQCIARRSDGDVAQGSAELQLGG 141 (150)
Q Consensus 114 ~~~g~y~C~~~~~~g~~~~~~~~l~v~~ 141 (150)
+|+|.|.|.+.+..+........|.|..
T Consensus 84 ~D~G~Y~C~~~n~~~~~~~~~~~l~V~~ 111 (250)
T 3esu_F 84 EDIGTYFCQQGNTLPWTFGGGTKLEIRR 111 (250)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEEC-
T ss_pred hhCEEEEEEEeeCCCceECCCEEEEEEC
Confidence 9999999999987553333445566655
No 418
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=98.78 E-value=7.2e-09 Score=58.90 Aligned_cols=45 Identities=27% Similarity=0.336 Sum_probs=38.1
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCceEEeCC
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYRVDVNP 61 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~ 61 (150)
+.|.|.+++.+|+|.|+|.+.|..|.....+.|.|.++|.+.+.+
T Consensus 74 ~~L~I~~v~~~DsG~Y~C~a~n~~g~~~~~~~l~V~~~p~i~~~p 118 (122)
T 3s35_X 74 STLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEKPFVAFGS 118 (122)
T ss_dssp EEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEECC----
T ss_pred EEEEECCCCcccCEEEEEEEccCCCceEEEEEEEEeccCeEEeec
Confidence 579999999999999999999999998899999999887766554
No 419
>2e27_L Anti-ciguatoxin antibody, light chain; immunoglobulin fold, immune system; HET: AB0; 1.70A {Mus musculus} PDB: 3iy1_A
Probab=98.77 E-value=9.7e-08 Score=54.17 Aligned_cols=65 Identities=23% Similarity=0.431 Sum_probs=49.0
Q ss_pred eCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecC--cccC------------CCcc--------eeeEEEccCCCCC
Q psy11131 59 VNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDG--RQIP------------GRTS--------STSLVINPVGRED 115 (150)
Q Consensus 59 ~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~--~~~~------------~~~~--------~~~l~~~~~~~~~ 115 (150)
..|..+.+.+|+.+.|.|... .+ .+.+.|++.. .... ...+ ...|.|.++..+|
T Consensus 8 q~p~~v~v~~G~~vtL~C~~~~~~---~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~D 84 (119)
T 2e27_L 8 QSPSSLSASLGGKVTITCKANQDI---KKKIAWYQHKPGKGPRLLIYYTSTLKSGISSRFSGSGSGRDYSFSISNLEPED 84 (119)
T ss_dssp EECSEEEEETTCCEEEEEEESSCC---TTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGG
T ss_pred ecCCeEEEeCCCCEEEEEEeCCCC---CceEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEccCCEEEEEECCCChHH
Confidence 345667889999999999998 77 7889998753 1110 0111 3479999999999
Q ss_pred CceEEEEEEeC
Q psy11131 116 RGIYQCIARRS 126 (150)
Q Consensus 116 ~g~y~C~~~~~ 126 (150)
+|.|.|.+.+.
T Consensus 85 sG~Y~C~~~~~ 95 (119)
T 2e27_L 85 AATYYCLQYDN 95 (119)
T ss_dssp CEEEEEEECGG
T ss_pred CEEEEEEEccC
Confidence 99999999864
No 420
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=98.77 E-value=2.6e-08 Score=54.14 Aligned_cols=46 Identities=28% Similarity=0.499 Sum_probs=39.4
Q ss_pred cCCCCceEEeCCeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEE
Q psy11131 6 VLPGPRTRVLGPILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQV 51 (150)
Q Consensus 6 ~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v 51 (150)
+..+.++.+..+.|.|.+++.+|+|.|.|.+.|..|.....+.|.|
T Consensus 49 ~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V 94 (95)
T 2ckn_A 49 LVESNRTRITGEEVEVRDSIPADSGLYACVTSSPSGSDTTYFSVNV 94 (95)
T ss_dssp CCCCSSEEECSSEEEESSCCGGGSEEEEEEEEETTEEEEEEEEEEE
T ss_pred cCCCCCEEEeCCEEEECCCChHHCEEEEEEeccCCCcEEEEEEEEE
Confidence 4455677777789999999999999999999999888888877776
No 421
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=98.76 E-value=1.8e-07 Score=57.90 Aligned_cols=80 Identities=23% Similarity=0.323 Sum_probs=57.7
Q ss_pred CCCcEEEecCCcEEEEEEec-C-------CCCCCcEEEEeecCccc-----C------------CCcc----------ee
Q psy11131 60 NPPLLSVHLDGSANFQCEIT-P-------YDSGPYLIAWFKDGRQI-----P------------GRTS----------ST 104 (150)
Q Consensus 60 ~~~~~~~~~g~~~~l~C~~~-~-------p~~~~~~~~w~~~~~~~-----~------------~~~~----------~~ 104 (150)
.+....+.+|+.+.|.|... . + .+.+.|++++... . ...+ ..
T Consensus 6 ~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~---~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 82 (214)
T 2zg1_A 6 VQKSVTVQEGLCVLVPCSFSYPWRSWYSSP---PLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNC 82 (214)
T ss_dssp CCSEEEEETTCCEEECCEEECCCCCCSCCC---CEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBC
T ss_pred CCcEEEEecCccEEEeeeeecCCcccCCCC---ceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeE
Confidence 45667889999999999987 4 4 7899999875420 0 0001 23
Q ss_pred eEEEccCCCCCCceEEEEEEeCCCCce---eeeEEEEEcCc
Q psy11131 105 SLVINPVGREDRGIYQCIARRSDGDVA---QGSAELQLGGT 142 (150)
Q Consensus 105 ~l~~~~~~~~~~g~y~C~~~~~~g~~~---~~~~~l~v~~~ 142 (150)
.|.|.++..+|.|.|.|.+.+..+... ...+.|.|.++
T Consensus 83 sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~ 123 (214)
T 2zg1_A 83 SLSIGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTAL 123 (214)
T ss_dssp CEEECSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECC
T ss_pred EEEEccCCHhhCceEEEEEEcCCCceeeecCCceEEEEecC
Confidence 799999999999999999998763211 24677777664
No 422
>1qfw_M FV, antibody (anti beta subunit) (light chain); glycoprotein hormone; HET: NAG; 3.50A {Mus musculus} SCOP: b.1.1.1
Probab=98.76 E-value=1.3e-07 Score=52.57 Aligned_cols=65 Identities=17% Similarity=0.378 Sum_probs=48.5
Q ss_pred eCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCc--c---cC---------CCcc--------eeeEEEccCCCCC
Q psy11131 59 VNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGR--Q---IP---------GRTS--------STSLVINPVGRED 115 (150)
Q Consensus 59 ~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~--~---~~---------~~~~--------~~~l~~~~~~~~~ 115 (150)
..|....+.+|+++.|.|... .+ .+.+.|++... . +. ...+ ...|.|.++..+|
T Consensus 6 q~p~~~~v~~G~~v~L~C~~~~~~---~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 82 (108)
T 1qfw_M 6 QSPKSMSMSVGERVTLSCKASETV---DSFVSWYQQKPEQSPKLLIFGASNRFSGVPDRFTGSGSATDFTLTISSVQAED 82 (108)
T ss_dssp EECSCEECCTTCCEEEEEEESSCC---CSCEEEEEECTTSCCEEEECSSSCBCTTCCTTEECCBCSSEEEEEESSCCTTC
T ss_pred EeCCeEEEcCCCCEEEEeeeCCCC---CcEEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEEcCCCEEEEEECCCChhh
Confidence 345567788999999999998 76 67899987431 1 10 0111 3479999999999
Q ss_pred CceEEEEEEeC
Q psy11131 116 RGIYQCIARRS 126 (150)
Q Consensus 116 ~g~y~C~~~~~ 126 (150)
+|.|.|.+.+.
T Consensus 83 sG~Y~C~~~~~ 93 (108)
T 1qfw_M 83 FADYHCGQTYN 93 (108)
T ss_dssp CSEEEEEECSS
T ss_pred CEEEEEEEccC
Confidence 99999999864
No 423
>2d9c_A Signal-regulatory protein beta-1; beta-sandwich, SIRP-beta-1, CD172B antigen, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.76 E-value=1.9e-07 Score=54.07 Aligned_cols=83 Identities=25% Similarity=0.368 Sum_probs=57.3
Q ss_pred eCCCcEEEecCCcEEEEEEec-C-CCCCCcEEEEeecCcc----cC--------CC----------cceeeEEEccCCCC
Q psy11131 59 VNPPLLSVHLDGSANFQCEIT-P-YDSGPYLIAWFKDGRQ----IP--------GR----------TSSTSLVINPVGRE 114 (150)
Q Consensus 59 ~~~~~~~~~~g~~~~l~C~~~-~-p~~~~~~~~w~~~~~~----~~--------~~----------~~~~~l~~~~~~~~ 114 (150)
..+....+.+|+.+.|.|... . + .+.+.|++.... +. .. .....|.|.++..+
T Consensus 13 q~p~~~~v~~G~~v~L~C~~~~~~~---~~~v~W~r~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~ 89 (136)
T 2d9c_A 13 QPEKSVSVAAGESATLRCAMTSLIP---VGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPA 89 (136)
T ss_dssp CCCSEEEEETTSCEEECCEESCCCS---CCCCEEEETTTSSCEEEEESSSCCCSSBCCSSCSSSSSCCBCCEEESSCCTT
T ss_pred ecCcEEEEcCCCCEEEEEEEcCCCC---CceEEEEeecCCCeEEEEEcCCCcccceeeeeeeccCCCCEEEEEECCCCHH
Confidence 345667889999999999997 4 5 678999986521 10 00 00457999999999
Q ss_pred CCceEEEEEEeCCC--Cce---eeeEEEEEcCcCc
Q psy11131 115 DRGIYQCIARRSDG--DVA---QGSAELQLGGTRN 144 (150)
Q Consensus 115 ~~g~y~C~~~~~~g--~~~---~~~~~l~v~~~p~ 144 (150)
|+|.|.|.+.+..+ ... .....|.|.++|.
T Consensus 90 DsG~Y~C~~~~~~~~~~~~~~~g~~t~L~V~~~~s 124 (136)
T 2d9c_A 90 DAGTYYCVKFRKGSPDDVEFKSGAGTELSVRAKPS 124 (136)
T ss_dssp TCEEEEEEEEECCSSSCEEEEECCCEEEEEECCCC
T ss_pred HCEEEEEEEEeCCCCcccceeeCCCeEEEEEeCCC
Confidence 99999999987532 011 1346777766543
No 424
>2q20_A VK1 O18/O8 germline light chain variable domain; Al, light chain amyloidosis, amyloid, immunoglobulin, protein fibril; 1.30A {Homo sapiens} PDB: 2kqm_A 3cdf_A 3cdc_A 2kqn_A 3cdy_A 2q1e_A 3dvi_A 1igm_L 1bww_A 1b0w_A 1bre_A 1qp1_A 3dvf_A 1rei_A 1wtl_A 1ar2_A 1fgv_L 2bx5_A 2uzi_L* 1bvk_A ...
Probab=98.76 E-value=1.1e-07 Score=52.96 Aligned_cols=66 Identities=15% Similarity=0.373 Sum_probs=49.6
Q ss_pred EeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCc--c---c---------CCCcc--------eeeEEEccCCCC
Q psy11131 58 DVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGR--Q---I---------PGRTS--------STSLVINPVGRE 114 (150)
Q Consensus 58 ~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~--~---~---------~~~~~--------~~~l~~~~~~~~ 114 (150)
...|....+.+|+.+.|.|... .+ .+.+.|++... . + ....+ ...|.|.++..+
T Consensus 7 ~q~p~~~~v~~G~~v~L~C~~~~~~---~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~ 83 (109)
T 2q20_A 7 TQSPSSLSASVGDRVTITCQASQDI---SNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPE 83 (109)
T ss_dssp EEECSEEEECTTCCEEEEEEESSCC---TTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred EeeCCEEEecCCCcEEEEEeeccCC---CCcEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEeccCCEEEEEECCCChh
Confidence 3345667889999999999998 77 78899987531 1 1 00111 347999999999
Q ss_pred CCceEEEEEEeC
Q psy11131 115 DRGIYQCIARRS 126 (150)
Q Consensus 115 ~~g~y~C~~~~~ 126 (150)
|+|.|.|.+.+.
T Consensus 84 DsG~Y~C~~~~~ 95 (109)
T 2q20_A 84 DIATYYCQQYDN 95 (109)
T ss_dssp GCEEEEEEECSS
T ss_pred hCEEEEEEEeeC
Confidence 999999999864
No 425
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=98.76 E-value=1.2e-08 Score=56.11 Aligned_cols=44 Identities=27% Similarity=0.357 Sum_probs=37.2
Q ss_pred CceEEeC----CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEec
Q psy11131 10 PRTRVLG----PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVST 53 (150)
Q Consensus 10 ~~~~~~~----~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~ 53 (150)
.|+.+.. .+|.|.++..+|+|.|+|.+.|..|..+..+.|.|..
T Consensus 52 ~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~ 99 (100)
T 3knb_A 52 GRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGNEFGSDSATVNIHIRS 99 (100)
T ss_dssp GTEEEEECSSEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred ceeeeecccceEEEEEcCCCccCCEEEEEEEEECCCEEEEEEEEEEEE
Confidence 3555443 4799999999999999999999999998889988864
No 426
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=98.75 E-value=2.3e-07 Score=57.75 Aligned_cols=82 Identities=20% Similarity=0.422 Sum_probs=57.7
Q ss_pred CCcEEEecCCcEEEEEEec-CC--CCCCcEEEEeecCccc---------CC------Ccc-----------eeeEEEccC
Q psy11131 61 PPLLSVHLDGSANFQCEIT-PY--DSGPYLIAWFKDGRQI---------PG------RTS-----------STSLVINPV 111 (150)
Q Consensus 61 ~~~~~~~~g~~~~l~C~~~-~p--~~~~~~~~w~~~~~~~---------~~------~~~-----------~~~l~~~~~ 111 (150)
+..+.+.+|+.+.|.|.+. .| ......+.|++++..+ .. ..+ ...|.|.++
T Consensus 8 ~~~v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v 87 (222)
T 3sbw_C 8 KDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDV 87 (222)
T ss_dssp CSEEEEETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESSC
T ss_pred CccEEEEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcCc
Confidence 3456788999999999986 44 1113589998864111 00 000 247999999
Q ss_pred CCCCCceEEEEEEeCCCCceeeeEEEEEcCcCc
Q psy11131 112 GREDRGIYQCIARRSDGDVAQGSAELQLGGTRN 144 (150)
Q Consensus 112 ~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p~ 144 (150)
..+|.|.|.|.+.+ .+ .....+.|.|..++.
T Consensus 88 ~~~D~G~Y~C~~~~-~~-~~~~~~~l~V~~~~~ 118 (222)
T 3sbw_C 88 KLQDAGVYRCMISY-GG-ADYKRITVKVNAPYN 118 (222)
T ss_dssp CGGGCEEEEEEEES-SS-EEEEEEEEEEEBCCC
T ss_pred ccccCeEEEEEEEe-CC-CceeEEEEEEECCCC
Confidence 99999999999998 44 566778888876553
No 427
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.75 E-value=3.5e-08 Score=54.02 Aligned_cols=49 Identities=29% Similarity=0.479 Sum_probs=41.1
Q ss_pred cCCCCceEEeCCeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecC
Q psy11131 6 VLPGPRTRVLGPILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTP 54 (150)
Q Consensus 6 ~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~ 54 (150)
+..+.++.+....|.|.++..+|+|.|+|.+.|..|.....+.|.|.+.
T Consensus 43 ~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~ 91 (99)
T 2cr3_A 43 LAESNRTRITGEEVEVQDSVPADSGLYACVTSSPSGSDTTYFSVNVSDA 91 (99)
T ss_dssp CCCCSSEEECSSEEEETTCCTTTCEEEEEEEEETTEEEEEEEEECBCSC
T ss_pred CCCCCcEEEECCEEEEccCCHHHCEEEEEEEEeCCceEEEEEEEEEecC
Confidence 3445677776789999999999999999999999888888888888764
No 428
>1zxq_A ICAM-2, intercellular adhesion molecule-2; immunoglobulin fold, cell adhesion, glycoprotein, transmembr; HET: NAG; 2.20A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=98.75 E-value=4.4e-08 Score=59.93 Aligned_cols=108 Identities=15% Similarity=0.227 Sum_probs=72.8
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCce-EEeCCCcEEEecCCcEEEEEEec--CCCCCCcEEEEeec
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYR-VDVNPPLLSVHLDGSANFQCEIT--PYDSGPYLIAWFKD 93 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~-~~~~~~~~~~~~g~~~~l~C~~~--~p~~~~~~~~w~~~ 93 (150)
..|.|.|++ |.|.|.|.+.-........+.|+|+.+|. +.+.+....+.+|+.++|.|.+. .|.. ...+.|++.
T Consensus 52 ~~l~l~~vs--~~g~~~C~~~c~~~~~~~~~~itVy~~P~~v~i~~~p~~~~~G~~~tL~C~v~~v~P~~-~L~v~llrG 128 (192)
T 1zxq_A 52 KHYLVSNIS--HDTVLQCHFTCSGKQESMNSNVSVYQPPRQVILTLQPTLVAVGKSFTIECRVPTVEPLD-SLTLFLFRG 128 (192)
T ss_dssp EEEEEEEEC--SCEEEEEEEEETTEEEEEEEEEEECBCCCCCEEEEESSEECTTSEEEEEEEECSCBCGG-GEEEEEEET
T ss_pred EEEEEeccc--cCCeeEEEEECCCcceEEEEEEEEEeCCCCceEccCCccccCCCcEEEEEEeCCeECCC-CcEEEEEcC
Confidence 358999998 78999999886545566788899987653 22322223578999999999998 6611 456899987
Q ss_pred CcccCCCc--------ceeeEE-EccCCCCCCc-eEEEEEEeCC
Q psy11131 94 GRQIPGRT--------SSTSLV-INPVGREDRG-IYQCIARRSD 127 (150)
Q Consensus 94 ~~~~~~~~--------~~~~l~-~~~~~~~~~g-~y~C~~~~~~ 127 (150)
+..+.... ....+. ...+..+|.| .|.|.|.-..
T Consensus 129 ~~~l~~~~f~~~~~~~~~~tv~~~~~~~r~D~g~~~sC~A~L~L 172 (192)
T 1zxq_A 129 NETLHYETFGKAAPAPQEATATFNSTADREDGHRNFSCLAVLDL 172 (192)
T ss_dssp TEEEEEEECCSSTTCTTCEEEEEEEECCGGGGGCEEEEEEEEEC
T ss_pred CEEeeecccccccCcCcceEEEEEEecchhhCCceEEEEEEecC
Confidence 76543211 122222 2345566777 7999998665
No 429
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=98.75 E-value=1.2e-07 Score=58.71 Aligned_cols=80 Identities=16% Similarity=0.261 Sum_probs=54.9
Q ss_pred CCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecC--ccc------------CCCcc--------eeeEEEccCCCCCCc
Q psy11131 61 PPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDG--RQI------------PGRTS--------STSLVINPVGREDRG 117 (150)
Q Consensus 61 ~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~--~~~------------~~~~~--------~~~l~~~~~~~~~~g 117 (150)
|....+.+|+.+.|.|.+. .|....+.+.|++++ ..+ ....+ ...|.|.++..+|+|
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 86 (212)
T 1q0x_L 7 ESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEA 86 (212)
T ss_dssp CSEEEECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred CCeEeecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCccCCE
Confidence 6667889999999999998 551002689998753 221 00111 347999999999999
Q ss_pred eEEEEEEeCCCCceeeeEEEEEc
Q psy11131 118 IYQCIARRSDGDVAQGSAELQLG 140 (150)
Q Consensus 118 ~y~C~~~~~~g~~~~~~~~l~v~ 140 (150)
.|.|.+.+..+........+.|.
T Consensus 87 ~Y~C~~~~~~~~~~~~~~~l~V~ 109 (212)
T 1q0x_L 87 IYFCALWSNNKLVFGGGTKLTVL 109 (212)
T ss_dssp EEEEEEECSSCEEECCCEEEEEC
T ss_pred EEEEEEecCchhhcCCCeEEEEe
Confidence 99999998765323344556663
No 430
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=98.74 E-value=1.7e-08 Score=60.87 Aligned_cols=75 Identities=15% Similarity=0.098 Sum_probs=56.5
Q ss_pred cEEEecCCcEEEEEEecCCCCCCcEEEEeecCcccCC------------Ccc------eeeEEEccCCCCCCceEEEEEE
Q psy11131 63 LLSVHLDGSANFQCEITPYDSGPYLIAWFKDGRQIPG------------RTS------STSLVINPVGREDRGIYQCIAR 124 (150)
Q Consensus 63 ~~~~~~g~~~~l~C~~~~p~~~~~~~~w~~~~~~~~~------------~~~------~~~l~~~~~~~~~~g~y~C~~~ 124 (150)
.+.+.+|+.+.|.|....| .+.+.|++++..+.. ..+ ...|.|.++...|+|.|.|.+.
T Consensus 4 ~v~~~~G~~VtL~c~~~~~---~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~DsG~Y~C~~~ 80 (171)
T 1ccz_A 4 QIYGVVYGNVTFHVPSNVP---LKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDEDEYEMESP 80 (171)
T ss_dssp EEEEETTCCEEECCCCSSC---CSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTTCCEEECSCCGGGCEEEEEECT
T ss_pred EEEEEcCCCEEEcCCCCCC---cceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCCCeEEECCCChhhCceEEEEEe
Confidence 3567899999999987555 789999987643210 001 4689999999999999999998
Q ss_pred eCCCCceeeeEEEEEcCcC
Q psy11131 125 RSDGDVAQGSAELQLGGTR 143 (150)
Q Consensus 125 ~~~g~~~~~~~~l~v~~~p 143 (150)
+..| ...+.|.|.+++
T Consensus 81 n~~~---~~~~~L~V~~~~ 96 (171)
T 1ccz_A 81 NITD---TMKFFLYVLEMV 96 (171)
T ss_dssp TCCS---CEEEEEEEECCC
T ss_pred CCCC---cEEEEEEEECcC
Confidence 7766 566777777654
No 431
>2yc1_B Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_B 3lh2_L 3h3p_L 3lhp_L
Probab=98.74 E-value=1e-07 Score=56.05 Aligned_cols=85 Identities=19% Similarity=0.325 Sum_probs=54.9
Q ss_pred EEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCc--c---cC---------CCcc--------eeeEEEccCCC
Q psy11131 57 VDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGR--Q---IP---------GRTS--------STSLVINPVGR 113 (150)
Q Consensus 57 ~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~--~---~~---------~~~~--------~~~l~~~~~~~ 113 (150)
+...+..+.+.+|+.+.|.|... .+ .+.+.|++... . +. ...+ ...|.|.++..
T Consensus 19 v~q~p~~v~v~~G~sVtL~C~~s~~~---~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~~~~sL~I~~v~~ 95 (146)
T 2yc1_B 19 LTQSPATLSVSPGERATLSCRASQSV---RSYLAWYQQKPGQAPRLLFSDASNRATGIPARFTGSGSGTDFTLTISSLEP 95 (146)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCC---TTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred EEEeCCEEEEecCCCEEEEEEECCCC---CCEEEEEEECCCCCCEEEEEeCCccCCCcCCCeEEecCCCEEEEEECCCCH
Confidence 33445667889999999999998 66 67899987531 1 10 0111 34699999999
Q ss_pred CCCceEEEEEEeCCCCceeeeEEEEEcCcCc
Q psy11131 114 EDRGIYQCIARRSDGDVAQGSAELQLGGTRN 144 (150)
Q Consensus 114 ~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p~ 144 (150)
+|+|.|.|.+.+........-..|.|..+++
T Consensus 96 ~DsG~Y~C~~~~~~~~~fg~GT~L~V~~~~~ 126 (146)
T 2yc1_B 96 EDFAIYYCQQYRYSPRTFGQGTKVEIKRAAA 126 (146)
T ss_dssp GGCSEEEEEECSSSSCEECCCEEEEEC----
T ss_pred HHCEEEEEEEecCCCCeECCCEEEEEeCCcc
Confidence 9999999999865321122233566655543
No 432
>2qsq_A Carcinoembryonic antigen-related cell adhesion MO; glycoprotein, GPI-anchor, immunoglobulin DOMA lipoprotein, membrane; 1.95A {Homo sapiens} PDB: 2qst_A 2ver_N* 2gk2_A
Probab=98.74 E-value=3.6e-08 Score=55.28 Aligned_cols=45 Identities=18% Similarity=0.206 Sum_probs=37.9
Q ss_pred CCceEEeC-CeEEEcCCCCCCCeEEEEEeccCCc-ceeEEEEEEEec
Q psy11131 9 GPRTRVLG-PILAIEGVTAEDSGTYRCSSSNIGG-EATAEVRLQVST 53 (150)
Q Consensus 9 ~~~~~~~~-~~l~i~~~~~~d~G~Y~C~~~~~~~-~~~~~~~l~v~~ 53 (150)
++|..+.. ++|.|.|++++|+|.|+|.+.+..+ ...+.+.|.|..
T Consensus 63 ~gR~~~~~ngSL~I~nvt~~D~G~Ytc~v~~~~~~~~~~~~~L~V~~ 109 (111)
T 2qsq_A 63 SGREIIYPNASLLIQNIIQNDAGFYTLHVIKSDLVNEEATGQFRVYP 109 (111)
T ss_dssp CSCEEECTTSCEEECSCCGGGCEEEEEEEEETTSCCEEEEEEEEEEC
T ss_pred CCcEEEecCCcEEEccCcccCCeEEEEEEEeCCCcEEEEEEEEEEec
Confidence 57877766 9999999999999999999998755 467778888875
No 433
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=98.74 E-value=2.6e-07 Score=58.53 Aligned_cols=64 Identities=16% Similarity=0.300 Sum_probs=49.0
Q ss_pred eCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecC--ccc------------C--CCcc---------eeeEEEccCC
Q psy11131 59 VNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDG--RQI------------P--GRTS---------STSLVINPVG 112 (150)
Q Consensus 59 ~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~--~~~------------~--~~~~---------~~~l~~~~~~ 112 (150)
..+..+.+.+|+.+.|.|.+. .+ .+.+.|++.. ... . ...+ ...|.|.++.
T Consensus 6 ~~p~~v~v~~G~~v~L~C~~~~~~---~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~ 82 (245)
T 3nfj_J 6 QWPATLVQPVGSPLSLECTVEGTS---NPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLL 82 (245)
T ss_dssp EECSEEEEETTCCEEEEEEEESCS---SCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCC
T ss_pred CCCceEEecCCCCEEEEEEecCCC---CceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCC
Confidence 445667889999999999999 78 8999998832 100 0 0001 3479999999
Q ss_pred CCCCceEEEEEEe
Q psy11131 113 REDRGIYQCIARR 125 (150)
Q Consensus 113 ~~~~g~y~C~~~~ 125 (150)
.+|+|.|.|.+.+
T Consensus 83 ~~D~G~Y~C~~~~ 95 (245)
T 3nfj_J 83 LSDSGFYLCAWSV 95 (245)
T ss_dssp GGGCEEEEEEEEC
T ss_pred hhhCEEEEEEEee
Confidence 9999999999998
No 434
>2q87_A CMRF35-H antigen; all-beta, immunoglobulin, IG-superfamily, IG-V, NKP44-like, natural killer cell IG-like receptor, inhibitory receptor; 1.70A {Homo sapiens}
Probab=98.73 E-value=1.1e-07 Score=53.01 Aligned_cols=80 Identities=16% Similarity=0.215 Sum_probs=52.2
Q ss_pred CcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcc--cC-----------CCcc----------eeeEEEccCCCCCCc
Q psy11131 62 PLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQ--IP-----------GRTS----------STSLVINPVGREDRG 117 (150)
Q Consensus 62 ~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~--~~-----------~~~~----------~~~l~~~~~~~~~~g 117 (150)
..+.+.+|+.+.|.|... ... ...+.|++.... .. ...+ ...|.|.++..+|+|
T Consensus 4 ~~v~~~~G~~v~L~C~~~~~~~--~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~DsG 81 (110)
T 2q87_A 4 RTVAGPVGGSLSVQCPYEKEHR--TLNKYWCRPPQIFLCDKIVETKGSAGKRNGRVSIRDSPANLSFTVTLENLTEEDAG 81 (110)
T ss_dssp EEEEECTTSCEEEEEECCGGGT--TSEEEEESCCSSSSCCCSEESSSTTCSEETTEEEEEEGGGTEEEEEESSCCGGGCE
T ss_pred cEEEEeCCCcEEEEeEecCCcC--CceEEEEecCCCCCCeEEEEeCCccccccCCEEEEEcCcCCEEEEEEccCCHHHCE
Confidence 345678999999999987 331 468999875311 10 0011 347999999999999
Q ss_pred eEEEEEEeCC-CCceeeeEEEEEcCcC
Q psy11131 118 IYQCIARRSD-GDVAQGSAELQLGGTR 143 (150)
Q Consensus 118 ~y~C~~~~~~-g~~~~~~~~l~v~~~p 143 (150)
.|.|.+.+.. |......+.+.|...|
T Consensus 82 ~Y~C~~~~~~~g~~~~~~~~v~v~V~p 108 (110)
T 2q87_A 82 TYWCGVDTPWLQDFHDPVVEVEVSVFP 108 (110)
T ss_dssp EEEEEEECTTSCCBCCCSEEEEEEEC-
T ss_pred EEEEEEecCccCccCCccEEEEEEEec
Confidence 9999999875 4112234445554444
No 435
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.73 E-value=3.2e-08 Score=54.39 Aligned_cols=49 Identities=22% Similarity=0.279 Sum_probs=39.0
Q ss_pred ecCCCCceEEeC----CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCc
Q psy11131 5 LVLPGPRTRVLG----PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPY 55 (150)
Q Consensus 5 ~~~~~~~~~~~~----~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~ 55 (150)
++..+.++.+.. ..|.|.++..+|+|.|+|.+.|. ..+..+.|.|.++|
T Consensus 45 ~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~--~~~~~a~L~V~~~P 97 (100)
T 2yuz_A 45 PVQESDRLKVVQKGRIHKLVIANALTEDEGDYVFAPDAY--NVTLPAKVHVISGP 97 (100)
T ss_dssp ECCCCSSEEEEECSSEEEEEESSCCGGGCSEEEEEESSS--CCCEEEEEEEECCS
T ss_pred ECCCCCcEEEEEeCCEEEEEECCCChhhCEEEEEEEcCC--CeeEEEEEEEeCCC
Confidence 445566766654 37999999999999999999997 45677888888765
No 436
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=98.73 E-value=4.3e-08 Score=63.41 Aligned_cols=83 Identities=16% Similarity=0.327 Sum_probs=57.0
Q ss_pred EEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcc-----cC---------CCcc--------eeeEEEccCCC
Q psy11131 57 VDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQ-----IP---------GRTS--------STSLVINPVGR 113 (150)
Q Consensus 57 ~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~-----~~---------~~~~--------~~~l~~~~~~~ 113 (150)
+...+....+.+|+.+.|.|.+. .| .+.+.|++++.. +. ...+ ...|.|.++..
T Consensus 15 v~~~p~~~~v~~G~~v~L~C~~~~~p---~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 91 (276)
T 3auv_A 15 MTQSPSSLSASVGDRVTITCRASQDV---STAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQP 91 (276)
T ss_dssp EEEECSEEECCTTCCEEEEEEESSCC---TTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred EEeCCCeEEEcCCCCEEEEeEcCCCC---CCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCCh
Confidence 34456667788999999999999 88 889999875421 10 0111 23799999999
Q ss_pred CCCceEEEEEEeCCCCceeeeEEEEEcCc
Q psy11131 114 EDRGIYQCIARRSDGDVAQGSAELQLGGT 142 (150)
Q Consensus 114 ~~~g~y~C~~~~~~g~~~~~~~~l~v~~~ 142 (150)
+|+|.|.|.+.|..+........|.|..+
T Consensus 92 ~DsG~Y~C~~~n~~~~~~~~~~~l~V~~~ 120 (276)
T 3auv_A 92 EDFATYYCQQHYTTPPTFGCGTKVEIKGG 120 (276)
T ss_dssp GGCEEEEEEECSSSSCCCCCCEEEEC---
T ss_pred hhCEEEEEEEecCCcccccCCEEEEEecC
Confidence 99999999999875422333455666554
No 437
>1h5b_A Murine T cell receptor (TCR) valpha domain; immune response, immunoglobulin fold; 1.85A {Mus musculus} SCOP: b.1.1.1 PDB: 1h5b_C 1h5b_B
Probab=98.73 E-value=1.5e-07 Score=52.72 Aligned_cols=67 Identities=28% Similarity=0.528 Sum_probs=48.7
Q ss_pred eCCCcEEEecCCcEEEEEEecCCCCCCcEEEEeecC--cccC----------C-----------CcceeeEEEccCCCCC
Q psy11131 59 VNPPLLSVHLDGSANFQCEITPYDSGPYLIAWFKDG--RQIP----------G-----------RTSSTSLVINPVGRED 115 (150)
Q Consensus 59 ~~~~~~~~~~g~~~~l~C~~~~p~~~~~~~~w~~~~--~~~~----------~-----------~~~~~~l~~~~~~~~~ 115 (150)
..|....+.+|+.+.|.|..... .+.+.|++.. .... . ......|.|.++..+|
T Consensus 6 q~p~~~~v~~G~~v~L~C~~~~~---~~~v~W~r~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D 82 (113)
T 1h5b_A 6 QSPSALSLHEGTDSALRCNFTTT---MRSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSERARYSTLHIRDAQLED 82 (113)
T ss_dssp EECSEEEEETTCCEEEEEEESSC---CSEEEEEEECTTSCEEEEEEESSSEEEETTEEEECCSSSSSEEEEEECSCCGGG
T ss_pred ECCCEEEEecCCcEEEEEEECCC---CceEEEEEECCCCCeEEEEEECCCCccCCceEEEEccCCCCEEEEEECCCChhh
Confidence 34566778999999999998732 3579998753 1110 0 0013479999999999
Q ss_pred CceEEEEEEeCCC
Q psy11131 116 RGIYQCIARRSDG 128 (150)
Q Consensus 116 ~g~y~C~~~~~~g 128 (150)
+|.|.|.+.+..+
T Consensus 83 sG~Y~C~~~n~~~ 95 (113)
T 1h5b_A 83 SGTYFCAAEASSG 95 (113)
T ss_dssp CEEEEEEEECSSS
T ss_pred CEEEEEEEecCCC
Confidence 9999999998654
No 438
>1xt5_A Variable region-containing chitin-binding protein 3; innate immunity, VCBP, primordial antigen receptor, florida lancelet, amphioxus; 1.15A {Branchiostoma floridae}
Probab=98.73 E-value=1.6e-07 Score=54.23 Aligned_cols=79 Identities=23% Similarity=0.413 Sum_probs=56.2
Q ss_pred CCCcEEEecCCcEEEEEEec----CCCCCCcEEEEeecCcccC----------------------------CC--cc---
Q psy11131 60 NPPLLSVHLDGSANFQCEIT----PYDSGPYLIAWFKDGRQIP----------------------------GR--TS--- 102 (150)
Q Consensus 60 ~~~~~~~~~g~~~~l~C~~~----~p~~~~~~~~w~~~~~~~~----------------------------~~--~~--- 102 (150)
.+....+.+|+.+.|.|... .+ .+.+.|++...... .. .+
T Consensus 10 ~~~~v~v~~G~~v~L~C~~~~~~~~~---~~~v~W~k~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~ 86 (135)
T 1xt5_A 10 THTEVEVHAGGTVELPCSYQLANDTQ---PPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASV 86 (135)
T ss_dssp SCSEEEEETTSCEEECCEEEEETCCS---CCEEEEEEESSSSSEEEEEEEEECCCCTTCCCCTTSEEEEECGGGTTTEEE
T ss_pred CCceEEEeCCCCEEEeeEeecCCCCC---ccEEEEEeeCCCCCceEEEEeccccccccccccccccccccChhhcCcEEE
Confidence 45567788999999999863 45 78999988543210 00 11
Q ss_pred ----eeeEEEccCCCCCCceEEEEEEeCCCC----ceeeeEEEEEcC
Q psy11131 103 ----STSLVINPVGREDRGIYQCIARRSDGD----VAQGSAELQLGG 141 (150)
Q Consensus 103 ----~~~l~~~~~~~~~~g~y~C~~~~~~g~----~~~~~~~l~v~~ 141 (150)
...|.|.++..+|+|.|.|.+.+.... .....+.|.|.+
T Consensus 87 ~~~~~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~g~~~~~~~L~V~g 133 (135)
T 1xt5_A 87 ANLAAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTG 133 (135)
T ss_dssp SCTTSCCEEECSCCGGGCEEEEEEEECSSCCSGGGEEEEEEEEEEET
T ss_pred ecCCCCeEEECCCChhhCcEEEEEEEcCCccccccccceeEEEEEec
Confidence 257999999999999999999985331 334667777754
No 439
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.72 E-value=6.2e-08 Score=53.00 Aligned_cols=46 Identities=28% Similarity=0.539 Sum_probs=38.7
Q ss_pred CCceEEeC-CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecC
Q psy11131 9 GPRTRVLG-PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTP 54 (150)
Q Consensus 9 ~~~~~~~~-~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~ 54 (150)
+.++.+.. +.|.|.+++.+|+|.|+|.+.|..|.....+.|.|.++
T Consensus 53 ~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 99 (100)
T 2edj_A 53 DPRATIQEQGTLQIKNLRISDTGTYTCVATSSSGETSWSAVLDVTES 99 (100)
T ss_dssp CSSCEECTTCCEEEESCCTTTCCEEEEEEECSSCCCBCCEEEEEESC
T ss_pred CCCEEEcCCCEEEEccCCcccCEEEEEEEEcCCCCEEEEEEEEEecC
Confidence 44555544 78999999999999999999999888888888888764
No 440
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=98.72 E-value=1.7e-07 Score=60.02 Aligned_cols=84 Identities=24% Similarity=0.402 Sum_probs=56.2
Q ss_pred EEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCC------------------cc----------eeeEE
Q psy11131 57 VDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGR------------------TS----------STSLV 107 (150)
Q Consensus 57 ~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~------------------~~----------~~~l~ 107 (150)
+...+....+.+|+.+.|.|.+. ......+.+.|++.+...... .+ ...|.
T Consensus 8 v~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~ 87 (268)
T 3mj6_A 8 LTVSSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGSLL 87 (268)
T ss_dssp ----CCEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCCEE
T ss_pred cccCCCceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEEEE
Confidence 33455667889999999999986 211116789999865422110 00 26799
Q ss_pred EccCCCCCCceEEEEEEeCCCC-ceeeeEEEEEc
Q psy11131 108 INPVGREDRGIYQCIARRSDGD-VAQGSAELQLG 140 (150)
Q Consensus 108 ~~~~~~~~~g~y~C~~~~~~g~-~~~~~~~l~v~ 140 (150)
|.++..+|.|.|.|.+.+..+. .....+.|.|.
T Consensus 88 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~ 121 (268)
T 3mj6_A 88 LQDVQKADEGIYTCEIRLKNESMVMKKPVELWVL 121 (268)
T ss_dssp ECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEE
T ss_pred ECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEe
Confidence 9999999999999999987552 24455666664
No 441
>2ywz_A NEW antigen receptor variable domain; IG VNAR, immune system; 2.21A {Orectolobus maculatus} PDB: 2ywy_A
Probab=98.72 E-value=1.3e-07 Score=52.92 Aligned_cols=64 Identities=23% Similarity=0.363 Sum_probs=48.4
Q ss_pred eCCCcEEEecCCcEEEEEEec-C--CCCCCcEEEEeecC--cc----cCCCcc----------eeeEEEccCCCCCCceE
Q psy11131 59 VNPPLLSVHLDGSANFQCEIT-P--YDSGPYLIAWFKDG--RQ----IPGRTS----------STSLVINPVGREDRGIY 119 (150)
Q Consensus 59 ~~~~~~~~~~g~~~~l~C~~~-~--p~~~~~~~~w~~~~--~~----~~~~~~----------~~~l~~~~~~~~~~g~y 119 (150)
..|....+.+|+.+.|.|... . + .+.+.|++.. .. +....+ ...|.|.++..+|+|.|
T Consensus 5 q~p~~~~~~~G~~v~L~C~~~~~~~~---~~~v~W~r~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y 81 (111)
T 2ywz_A 5 QTPRTITKETGESLTIKCVLKDHSCG---LSSTTWYRTQLGSTNEKTISIGGRYDETVDKGSKSFSLRISDLRVEDSGTY 81 (111)
T ss_dssp EECSEEEECTTCCEEEEEEEESCSSC---CCEEEEEEEETTCCCCEECCSBTTEEEEEETTTTEEEEEECSCCGGGCEEE
T ss_pred ECCCcEEEccCCCEEEEeEECCCCCC---CCEEEEEEeCCCCCceEeeEeCCCEEEEEeCCCCEEEEEECCCChhcCEEE
Confidence 346667889999999999987 4 5 6789998752 11 111111 45799999999999999
Q ss_pred EEEEEe
Q psy11131 120 QCIARR 125 (150)
Q Consensus 120 ~C~~~~ 125 (150)
.|.+.+
T Consensus 82 ~C~~~~ 87 (111)
T 2ywz_A 82 KCQADY 87 (111)
T ss_dssp EEEEEE
T ss_pred EEEEEc
Confidence 999998
No 442
>4ety_A LAIR-1, mlair1, leukocyte-associated immunoglobulin-like receptor; IG-like domain, extra celluar domain, domain swappin nysgrc, structural genomics; 1.90A {Mus musculus}
Probab=98.72 E-value=2.6e-07 Score=52.25 Aligned_cols=75 Identities=19% Similarity=0.243 Sum_probs=55.0
Q ss_pred EEEecCCcEEEEEEecCCCCCC----cEEEEeecCcccCC-----CcceeeEEEccCCCCCCceEEEEEEeCCC-Cceee
Q psy11131 64 LSVHLDGSANFQCEITPYDSGP----YLIAWFKDGRQIPG-----RTSSTSLVINPVGREDRGIYQCIARRSDG-DVAQG 133 (150)
Q Consensus 64 ~~~~~g~~~~l~C~~~~p~~~~----~~~~w~~~~~~~~~-----~~~~~~l~~~~~~~~~~g~y~C~~~~~~g-~~~~~ 133 (150)
..+..|+.++|.| .... . ..+.|++++..... ......+.|..+...|+|.|.|...+..+ ...+.
T Consensus 18 ~vV~~G~~VTL~C-~~~~---~~~~~~~f~L~k~g~~~~~~~~~~~~~~a~f~i~~vt~~daG~Y~C~y~~~~~wS~~Sd 93 (118)
T 4ety_A 18 LMISQGTFVTVVC-SYSD---KHDLYNMVRLEKDGSTFMEKSTEPYKTEDEFEIGPVNETITGHYSCIYSKGITWSERSK 93 (118)
T ss_dssp EEEETTCCEEEEE-ECTT---TGGGCCEEEEEETTEEEEEEECCSSSSEEEEEECSCCGGGCEEEEEEEEC----CEECC
T ss_pred CcccCCCcEEEEE-CCCC---CCcccCEEEEEECCcCccccccCCCCcceEEEeCccCccCCeEEEEEeeCCCccccccC
Confidence 4578899999999 7633 3 68999988865321 11167899999999999999999987655 24577
Q ss_pred eEEEEEcCc
Q psy11131 134 SAELQLGGT 142 (150)
Q Consensus 134 ~~~l~v~~~ 142 (150)
.+.|.|.+.
T Consensus 94 pl~L~Vtg~ 102 (118)
T 4ety_A 94 TLELKVIKE 102 (118)
T ss_dssp CEEEEEECC
T ss_pred CEEEEEEEe
Confidence 888888764
No 443
>2ptt_A CD48 antigen; CD244, CD48, NK cell receptor, X-RAY, immune system; 1.63A {Mus musculus} PDB: 2ptv_A
Probab=98.71 E-value=1.8e-07 Score=52.13 Aligned_cols=77 Identities=18% Similarity=0.225 Sum_probs=54.6
Q ss_pred CCcEEEecCCcEEEEEEe-c-CCCCCCcEEEEeecCcc-cC------------C--Ccc------eeeEEEccCCCCCCc
Q psy11131 61 PPLLSVHLDGSANFQCEI-T-PYDSGPYLIAWFKDGRQ-IP------------G--RTS------STSLVINPVGREDRG 117 (150)
Q Consensus 61 ~~~~~~~~g~~~~l~C~~-~-~p~~~~~~~~w~~~~~~-~~------------~--~~~------~~~l~~~~~~~~~~g 117 (150)
+....+.+|+.+.|.|.. . .+ .+.+.|++.... +. . ..+ ...|.|.++..+|+|
T Consensus 10 ~~~v~~~~G~~v~L~C~~~~~~~---~~~v~W~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~DsG 86 (110)
T 2ptt_A 10 IPDINAYTGSNVTLKIHKDPLGP---YRRITWLHTKNQKILEYNYNSTKTIFESEFKGRVYLEENNGALHISNVRKEDKG 86 (110)
T ss_dssp CCSEEEETTSCEEECSCSSCCCS---CSEEEEEESTTBEEEEEETTSCEEECSSTTTTTEEECTTTCCEEESSCCGGGCE
T ss_pred CCCEEEecCCcEEEeCCccCCCC---cCEEEEEecCCccEEEEECCCCceeeccccCCcEEEeCCCccEEECCCCcccCe
Confidence 345778899999999998 4 56 679999983221 10 0 011 357999999999999
Q ss_pred eEEEEEEeCCCCceeeeEEEEEcCc
Q psy11131 118 IYQCIARRSDGDVAQGSAELQLGGT 142 (150)
Q Consensus 118 ~y~C~~~~~~g~~~~~~~~l~v~~~ 142 (150)
.|.|.+.+... ....+.|.|.++
T Consensus 87 ~Y~C~v~~~~~--~~~~~~L~V~dp 109 (110)
T 2ptt_A 87 TYYMRVLRETE--NELKITLEVFDP 109 (110)
T ss_dssp EEEEEEESSSB--CCEEEEEEEECC
T ss_pred EEEEEEEcCCC--cEEEEEEEEEcc
Confidence 99999986542 344677777643
No 444
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=98.71 E-value=5.6e-08 Score=68.96 Aligned_cols=79 Identities=16% Similarity=0.356 Sum_probs=61.2
Q ss_pred cEEEecCCcEEEEEEe-c-CCCCCCcEEEEeecCcccCC------------Ccc-----eeeEEEccCCCCCCceEEEEE
Q psy11131 63 LLSVHLDGSANFQCEI-T-PYDSGPYLIAWFKDGRQIPG------------RTS-----STSLVINPVGREDRGIYQCIA 123 (150)
Q Consensus 63 ~~~~~~g~~~~l~C~~-~-~p~~~~~~~~w~~~~~~~~~------------~~~-----~~~l~~~~~~~~~~g~y~C~~ 123 (150)
...+.+|+.+.|.|.. . .| .+.+.|++++..+.. ..+ ...|.|.++..+|.|.|+|.+
T Consensus 375 ~~~~~~G~~v~L~C~~~~~~~---~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D~G~Y~C~~ 451 (581)
T 3o3u_N 375 NITARIGEPLVLKCKGAPKKP---PQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLPNGSLFLPAVGIQDEGIFRCQA 451 (581)
T ss_dssp EEEEETTSCEEECCTTCCSSS---SCEEEEEEEETTSSSCEECCSCCSSGGGGTSEECTTSCEEESSCCGGGCEEEEEEE
T ss_pred ccceecCCcEEEeeeecCCCC---CceEEEEEcCCeeEEEEecccCCCCCcCCcEEEcCCceEEEeccccccCeEEEEEE
Confidence 4567899999999999 5 77 889999987652210 111 357999999999999999999
Q ss_pred EeCCCCceeeeEEEEEcCcCc
Q psy11131 124 RRSDGDVAQGSAELQLGGTRN 144 (150)
Q Consensus 124 ~~~~g~~~~~~~~l~v~~~p~ 144 (150)
.+..+......+.|.|..+|.
T Consensus 452 ~n~~~~~~~~~~~l~V~~~~~ 472 (581)
T 3o3u_N 452 MNRNGKETKSNYRVRVYQIPG 472 (581)
T ss_dssp ECTTSCEEEEEEEEEEEBCCC
T ss_pred EcCCCceeEEEEEEEEEcCCC
Confidence 998885436778888876543
No 445
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=98.71 E-value=4e-08 Score=54.42 Aligned_cols=50 Identities=26% Similarity=0.369 Sum_probs=39.1
Q ss_pred cCCCCceEEeC-C---eEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCc
Q psy11131 6 VLPGPRTRVLG-P---ILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPY 55 (150)
Q Consensus 6 ~~~~~~~~~~~-~---~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~ 55 (150)
+..+.++.+.. + .|.|.+++.+|+|.|+|.+.|..|.....+.|.|.++|
T Consensus 54 ~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~P 107 (107)
T 3irg_B 54 LAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARNAAGEAYAAAAVTVLEPP 107 (107)
T ss_dssp CCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC--
T ss_pred CCCCCcEEEEeCCCEEEEEEccCCHHhCEEEEEEEEcCCCcEEEEEEEEEEcCC
Confidence 33445555443 3 79999999999999999999998988888899888653
No 446
>3rrq_A Protein PD-1, programmed cell death protein 1; programmed death-1, costimulatory, immune system; 2.10A {Homo sapiens}
Probab=98.71 E-value=2.2e-07 Score=53.41 Aligned_cols=82 Identities=22% Similarity=0.426 Sum_probs=56.3
Q ss_pred eCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeec--CcccC------C-------Ccc----------eeeEEEccCC
Q psy11131 59 VNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKD--GRQIP------G-------RTS----------STSLVINPVG 112 (150)
Q Consensus 59 ~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~--~~~~~------~-------~~~----------~~~l~~~~~~ 112 (150)
..|..+.+.+|+.+.|.|... ... ...+.|++. +.... . ..+ ...|.|.++.
T Consensus 6 Q~P~~~~v~~G~~vtL~C~~s~~~~--~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~~ 83 (129)
T 3rrq_A 6 FSPALLVVTEGDNATFTCSFSNTSE--SFVLNWYRMSPSNQTDKLAAFPEDRSQPGQDCRFRVTQLPNGRDFHMSVVRAR 83 (129)
T ss_dssp EECSEEEEETTSCEEEEEECCCCC---CEEEEEEEEESTTSCEEEEEETC--------CCEEEEECTTSSEEEEEESSCC
T ss_pred ECCCEEEEeCCCCEEEEeEecCCCC--CcEEEEeEeCCCCCccEEEEEcCCccCCCcCCcEEEEEcCCCCEEEEEECCCC
Confidence 346667889999999999987 431 467899863 21100 0 001 3579999999
Q ss_pred CCCCceEEEEEEeCCCCc---eeeeEEEEEcCc
Q psy11131 113 REDRGIYQCIARRSDGDV---AQGSAELQLGGT 142 (150)
Q Consensus 113 ~~~~g~y~C~~~~~~g~~---~~~~~~l~v~~~ 142 (150)
.+|+|.|.|.+.+..+.. .+..+.|.|.+.
T Consensus 84 ~~Dsg~Y~C~~~~~~~~~~~~~s~~~~L~V~~~ 116 (129)
T 3rrq_A 84 RNDSGTYLCGAISLAPKLQIKESLRAELRVTER 116 (129)
T ss_dssp GGGCEEEEEEEEECGGGCEEEECCCEEEEEECC
T ss_pred hhHCEEEEEEEEecCCCceeeEeceEEEEEecC
Confidence 999999999999876521 144567777653
No 447
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=98.70 E-value=1.3e-07 Score=59.74 Aligned_cols=84 Identities=24% Similarity=0.448 Sum_probs=57.8
Q ss_pred eCCCcEEEecCCcEEEEEEec-CCC-CCCcEEEEeecC--cccC------------CCcc--------eeeEEEccCCCC
Q psy11131 59 VNPPLLSVHLDGSANFQCEIT-PYD-SGPYLIAWFKDG--RQIP------------GRTS--------STSLVINPVGRE 114 (150)
Q Consensus 59 ~~~~~~~~~~g~~~~l~C~~~-~p~-~~~~~~~w~~~~--~~~~------------~~~~--------~~~l~~~~~~~~ 114 (150)
..+....+.+|+.+.|.|.+. .|. ...+.+.|+++. ..+. ...+ ...|.|.++..+
T Consensus 6 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 85 (240)
T 1moe_A 6 QSPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVEAD 85 (240)
T ss_dssp EECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred eeCCeEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCCChh
Confidence 345667889999999999998 530 005789998853 2110 0011 237999999999
Q ss_pred CCceEEEEEEeCCCCceeeeEEEEEcCc
Q psy11131 115 DRGIYQCIARRSDGDVAQGSAELQLGGT 142 (150)
Q Consensus 115 ~~g~y~C~~~~~~g~~~~~~~~l~v~~~ 142 (150)
|+|.|.|.+.+..+........|.|..+
T Consensus 86 D~G~Y~C~~~n~~~~~~~~~~~l~V~~~ 113 (240)
T 1moe_A 86 DVATYYCQQTNEDPYTFGGGTKLEIKGG 113 (240)
T ss_dssp GCEEEEEEECSSSSCCBCCCEEEEECCC
T ss_pred hCEEEEEEEccCCceeecCCEEEEEecC
Confidence 9999999999876532445567777664
No 448
>1i8k_A Epidermal growth factor receptor antibody MR1SCFV light chain; antibody-peptide complex, immunoglobulin fold, type II' beta turn., immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 PDB: 1i8i_A
Probab=98.70 E-value=1.6e-07 Score=52.15 Aligned_cols=65 Identities=18% Similarity=0.305 Sum_probs=48.5
Q ss_pred eCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecC--cccC------------CCcc--------eeeEEEccCCCCC
Q psy11131 59 VNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDG--RQIP------------GRTS--------STSLVINPVGRED 115 (150)
Q Consensus 59 ~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~--~~~~------------~~~~--------~~~l~~~~~~~~~ 115 (150)
..|....+.+|+.+.|.|... .+ .+.+.|++.. .... ...+ ...|.|.++..+|
T Consensus 6 q~p~~~~~~~G~~v~L~C~~~~~~---~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 82 (107)
T 1i8k_A 6 QSPASLSVATGEKVTIRCMTSTDI---DDDMNWYQQKPGEPPKFLISEGNTLRPGVPSRFSSSGTGTDFVFTIENTLSED 82 (107)
T ss_dssp EECSEEECCTTCCEEEEEEESSCC---TTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGG
T ss_pred eCCCeEEecCCCCEEEEEEECCCC---CCcEEEEEECCCCCCEEEEEecCccCCCCCCCEEEEccCCEEEEEECCCCHHH
Confidence 345567788999999999998 77 7789998753 1110 0111 2479999999999
Q ss_pred CceEEEEEEeC
Q psy11131 116 RGIYQCIARRS 126 (150)
Q Consensus 116 ~g~y~C~~~~~ 126 (150)
+|.|.|.+.+.
T Consensus 83 sG~Y~C~~~~~ 93 (107)
T 1i8k_A 83 VGDYYCLQSFN 93 (107)
T ss_dssp CEEEEEEECSS
T ss_pred CEEEEEEEeeC
Confidence 99999999864
No 449
>4f9p_D 103.2 anti-BTN3A1 antibody fragment; B7 superfamily, butyrophilin, CD277, immune system; 3.52A {Mus musculus}
Probab=98.70 E-value=4e-07 Score=57.40 Aligned_cols=112 Identities=25% Similarity=0.410 Sum_probs=69.7
Q ss_pred CceEEeC------CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecC---------------------ceEEeCCC
Q psy11131 10 PRTRVLG------PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTP---------------------YRVDVNPP 62 (150)
Q Consensus 10 ~~~~~~~------~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~---------------------~~~~~~~~ 62 (150)
.|+.+.. ..|.+.+++.+|++.|+|........=-.-+.++|... ..+...|.
T Consensus 66 gR~TiSrD~s~nt~yLqm~sL~~eDTAvYYCAr~~~~d~WGqGT~VTVSSast~~ps~~~l~~~~sgGSgsdivltQsP~ 145 (254)
T 4f9p_D 66 DRTTLTADQSSSTAYMQLSSLTSDDSAVYFCARSDYGAYWGQGTLVTVSAAGGGGSGGGGSGGGGSGGGGSDIVLTQSPV 145 (254)
T ss_dssp TTEEEEEETTTTEEEEEECSCCGGGCEEEECEESSSCCEECCCEEEEECC-------------------CCSCCEEEECS
T ss_pred CCEEEeeccCCCcCeeEEccCCCCCCEEEEEEecCCCCCcCCCEEEEEeCCCCcCCCCCCCccccccccccccccccCCc
Confidence 5666543 35899999999999999964321100001123344311 12334456
Q ss_pred cEEEecCCcEEEEEEec-CCCCCCcEEEEeec--CcccC------------CCcc--------eeeEEEccCCCCCCceE
Q psy11131 63 LLSVHLDGSANFQCEIT-PYDSGPYLIAWFKD--GRQIP------------GRTS--------STSLVINPVGREDRGIY 119 (150)
Q Consensus 63 ~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~--~~~~~------------~~~~--------~~~l~~~~~~~~~~g~y 119 (150)
.+.+.+|+.+.|.|.+. .- ...+.|++. ++... ...+ ...|.|+.++.+|.+.|
T Consensus 146 slsvs~G~~vtlsC~~S~~~---~~~l~WyqQ~PG~~p~lLiy~~s~~~sGvp~RFSgS~sgt~ftLtIs~lq~eD~A~Y 222 (254)
T 4f9p_D 146 TLSVTPGDSVSLSCRASQSI---SNNLHWYRQKSHESPRLLIKYASQSIFGIPSRFSGSGSGTEFTLSINSVETEDFGIY 222 (254)
T ss_dssp EEEECTTCEEEEEEEESSCC---TTCCEEEEECTTSCCEEEEETTTEECTTSCTTCEEECCTTEEEEEEESCCTTCCEEE
T ss_pred eeEEcCCCcEeeEEEccCcc---cCCcEEEEECCCCCCEEEEEeeeecCCCCCCCEEeeeeCCEEEEEECCCCHHHCEEE
Confidence 67789999999999987 43 334678653 22110 0001 34799999999999999
Q ss_pred EEEEE
Q psy11131 120 QCIAR 124 (150)
Q Consensus 120 ~C~~~ 124 (150)
.|.-.
T Consensus 223 YC~q~ 227 (254)
T 4f9p_D 223 FCQQS 227 (254)
T ss_dssp EEEEC
T ss_pred EEeec
Confidence 99654
No 450
>3r0n_A Poliovirus receptor-related protein 2; IG-domain, cell-adhesion molecule, virus entry receptor, STR genomics, PSI-biology; 1.30A {Homo sapiens} PDB: 4dfh_A 4dfi_A
Probab=98.69 E-value=1.3e-07 Score=54.08 Aligned_cols=77 Identities=22% Similarity=0.458 Sum_probs=51.4
Q ss_pred CCcEEEecCCcEEEEEEec-CCCC-CCcEEEEeecC----------------cccCCC----cc----------------
Q psy11131 61 PPLLSVHLDGSANFQCEIT-PYDS-GPYLIAWFKDG----------------RQIPGR----TS---------------- 102 (150)
Q Consensus 61 ~~~~~~~~g~~~~l~C~~~-~p~~-~~~~~~w~~~~----------------~~~~~~----~~---------------- 102 (150)
+..+.+.+|+.+.|.|... .+.. ....+.|++.. ..+... .+
T Consensus 9 p~~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~g~~~~~ 88 (128)
T 3r0n_A 9 LPEVRGQLGGTVELPCHLLPPVPGLYISLVTWQRPDAPANHQNVAAFHPKMGPSFPSPKPGSERLSFVSAKQSTGQDTEA 88 (128)
T ss_dssp CSEEECCTTSCEEECCEEESCCTTCEEEEEEEECTTSCGGGCEEEEEETTTEEECCSSSSCGGGEEESSCBCCCSTTCCC
T ss_pred CCeEEEEcCCCEEEEEEeecCCCCCcEEEEEEEEeCCCCCCeeEEEEecccCcccccccccCCcEEEecccccccccccc
Confidence 4556778999999999998 5410 02389999852 111110 11
Q ss_pred ---eeeEEEccCCCCCCceEEEEEEe-CCCCceeeeEEEE
Q psy11131 103 ---STSLVINPVGREDRGIYQCIARR-SDGDVAQGSAELQ 138 (150)
Q Consensus 103 ---~~~l~~~~~~~~~~g~y~C~~~~-~~g~~~~~~~~l~ 138 (150)
...|.|.++..+|+|.|.|.+.+ ..| .......|.
T Consensus 89 ~~~~~sL~I~~v~~~D~G~Y~C~v~~~~~g-~~~~~~~L~ 127 (128)
T 3r0n_A 89 ELQDATLALHGLTVEDEGNYTCEFATFPKG-SVRGMTWLR 127 (128)
T ss_dssp BCSBCCEEECSCCGGGCEEEEEEEEEETTE-EEEEEEEEE
T ss_pred CCCCeEEEEccCCchhCeEEEEEEEeCCCC-CcccEEEEE
Confidence 12899999999999999998765 445 455555554
No 451
>2oyp_A Hepatitis A virus cellular receptor 2; TIM-3, T-cell immunoglobulin mucin, signaling protein; 1.95A {Mus musculus} PDB: 3kaa_A*
Probab=98.69 E-value=3.7e-08 Score=54.69 Aligned_cols=76 Identities=24% Similarity=0.360 Sum_probs=50.9
Q ss_pred EEEecCCcEEEEEEec-CCCCCCcEEEEeecCcc---------------cC--CCcc----------eeeEEEccCCCCC
Q psy11131 64 LSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQ---------------IP--GRTS----------STSLVINPVGRED 115 (150)
Q Consensus 64 ~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~---------------~~--~~~~----------~~~l~~~~~~~~~ 115 (150)
+.+.+|+.+.|.|... .+......+.|++.... .. ...+ ...|.|.++..+|
T Consensus 4 v~~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~g~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~D 83 (109)
T 2oyp_A 4 YKVEVGKNAYLPCSYTLPTSGTLVPMCWGKGFCPWSQCTNELLRTDERNVTYQKSSRYQLKGDLNKGDVSLIIKNVTLDD 83 (109)
T ss_dssp EEECTTSCEEECCBCCCCTTCCCCCEEEESSSCCSSSCSSEEEEECSSSEEEESCTTEEECSCGGGTBCCEEECSCCGGG
T ss_pred EEEEcCCCEEEEEEeECCCCCCeEEEEEEecCCCCCCceeEEEEcCCcCccccccceEEEccCccCCcEeEEEccCCChh
Confidence 4577899999999987 44111245899874321 00 0000 3579999999999
Q ss_pred CceEEEEEEeCCCCceeeeEEEEEc
Q psy11131 116 RGIYQCIARRSDGDVAQGSAELQLG 140 (150)
Q Consensus 116 ~g~y~C~~~~~~g~~~~~~~~l~v~ 140 (150)
+|.|.|.+.+..+ .....+.|.|.
T Consensus 84 ~G~Y~C~v~~~~~-~~~~~~~l~V~ 107 (109)
T 2oyp_A 84 HGTYCCRIQFPGL-MNDKKLELKLD 107 (109)
T ss_dssp CEEEEEEECCSST-TCCEEEEEEEE
T ss_pred CeEEEEEEEcCCc-ccceEEEEEEE
Confidence 9999999998765 34445555553
No 452
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.69 E-value=1.9e-08 Score=56.96 Aligned_cols=38 Identities=24% Similarity=0.283 Sum_probs=35.3
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecC
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTP 54 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~ 54 (150)
.+|.|.+++.+|+|.|+|++.+..|..++.+.|.|..+
T Consensus 80 ~~L~I~~v~~~D~G~Y~Cevsn~~g~~s~~~~L~V~~~ 117 (118)
T 2edn_A 80 VELHIGKVVLGDRGYYRLEVKAKDTCDSCGFNIDVEAP 117 (118)
T ss_dssp EEEEESSCCTTTCSCEEEEEECSSCEEEEEECCEEECC
T ss_pred EEEEEeeCChhhCEEEEEEEEEcCCcEEEEEEEEEEcC
Confidence 67999999999999999999999999999999999864
No 453
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.68 E-value=4.2e-08 Score=56.15 Aligned_cols=37 Identities=19% Similarity=0.250 Sum_probs=35.0
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEec
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVST 53 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~ 53 (150)
.+|.|.+++..|+|.|+|++.|..+..++.+.|+|..
T Consensus 75 ~~L~I~~v~~~DaG~Y~Cevsn~~g~~~~~~~L~V~~ 111 (126)
T 2dav_A 75 FEMQIIKAKDNFAGNYRCEVTYKDKFDSCSFDLEVHE 111 (126)
T ss_dssp EEEEECSCCTTSCEEEEEEEECSSCEEEECCEEEEEC
T ss_pred EEEEEccCCcccCEEEEEEEEeCCCcEEEEEEEEEEe
Confidence 6799999999999999999999999999999999997
No 454
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=98.67 E-value=9.1e-08 Score=52.91 Aligned_cols=47 Identities=21% Similarity=0.258 Sum_probs=38.4
Q ss_pred CCCceEEe-----CCeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCc
Q psy11131 8 PGPRTRVL-----GPILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPY 55 (150)
Q Consensus 8 ~~~~~~~~-----~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~ 55 (150)
.+.|+.+. ..+|.|.+++.+|+|.|+|.+.+ .+..+..+.|.|..+|
T Consensus 57 ~~~r~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n-~~~~~~~~~L~V~~~P 108 (108)
T 3m45_A 57 RDNRIELVRASWHELSISVSDVSLSDEGQYTCSLFT-MPVKTSKAYLTVLGVP 108 (108)
T ss_dssp CCTTEEEEEESSSEEEEEECSCCGGGCEEEEEEECS-SSCEEEEEEEEEECCC
T ss_pred ccCcEEEeecCCCcEEEEECCCChhHCeEEEEEEEc-CCCcEEEEEEEEEcCC
Confidence 34566653 26899999999999999999999 7888888889888653
No 455
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=98.66 E-value=1.9e-08 Score=62.81 Aligned_cols=83 Identities=17% Similarity=0.230 Sum_probs=57.1
Q ss_pred CcEEEecCCcEEEEEEec--CCCCC-CcEEEEeecCcccCC-------------Cc-------------ceeeEEEccCC
Q psy11131 62 PLLSVHLDGSANFQCEIT--PYDSG-PYLIAWFKDGRQIPG-------------RT-------------SSTSLVINPVG 112 (150)
Q Consensus 62 ~~~~~~~g~~~~l~C~~~--~p~~~-~~~~~w~~~~~~~~~-------------~~-------------~~~~l~~~~~~ 112 (150)
....+.+|+.+.|.|.+. .+... ...+.|++++..... .. ....|.|.++.
T Consensus 7 ~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~ 86 (221)
T 3eow_R 7 TQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGLR 86 (221)
T ss_dssp CCCCCCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCSS
T ss_pred CcEEEEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccCC
Confidence 345567899999999985 33100 125999987542110 00 13479999999
Q ss_pred CCCCceEEEEEEeCC-CCceeeeEEEEEcCcCcc
Q psy11131 113 REDRGIYQCIARRSD-GDVAQGSAELQLGGTRNI 145 (150)
Q Consensus 113 ~~~~g~y~C~~~~~~-g~~~~~~~~l~v~~~p~~ 145 (150)
.+|.|.|.|.+.+.. + .....+.|.|..+|.+
T Consensus 87 ~~D~G~Y~C~~~~~~~~-~~~~~~~L~V~~~P~~ 119 (221)
T 3eow_R 87 VEDEGSYTCLFVTFPQG-SRSVDIWLRVLAKPQN 119 (221)
T ss_dssp CCCCSCBEEEEEESSSC-SCEEECCCCCCCCCEE
T ss_pred hHHCeEEEEEEEeCCCC-ceEEEEEEEEEECCCc
Confidence 999999999999876 5 4567777777776544
No 456
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=98.66 E-value=8.6e-08 Score=53.12 Aligned_cols=47 Identities=23% Similarity=0.323 Sum_probs=34.5
Q ss_pred CCceEEeC--CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCc
Q psy11131 9 GPRTRVLG--PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPY 55 (150)
Q Consensus 9 ~~~~~~~~--~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~ 55 (150)
+.++.+.. +.|.|.++..+|+|.|+|.+.|..|.....+.|.|..++
T Consensus 54 ~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~ 102 (108)
T 3kvq_A 54 DSGIVLKDGNRNLTIRRVRKEDEGLYTCQACSVLGCAKVEAFFIIEGAQ 102 (108)
T ss_dssp BTTEEEETTTTEEEECSCCGGGCEEEEEEEC----CEEEEEEEEEEC--
T ss_pred CCCeEEeCCCcEEEEeecCcccCEEEEEEEEeCCCceEEEEEEEEeCCC
Confidence 34444443 689999999999999999999999998889999998754
No 457
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=98.66 E-value=2.3e-07 Score=59.62 Aligned_cols=82 Identities=17% Similarity=0.282 Sum_probs=54.9
Q ss_pred EEeCCCcEEEecCCcEEEEEEecCCCCCCcEEEEeec--Cccc------------------------CC-CcceeeEEEc
Q psy11131 57 VDVNPPLLSVHLDGSANFQCEITPYDSGPYLIAWFKD--GRQI------------------------PG-RTSSTSLVIN 109 (150)
Q Consensus 57 ~~~~~~~~~~~~g~~~~l~C~~~~p~~~~~~~~w~~~--~~~~------------------------~~-~~~~~~l~~~ 109 (150)
+...+....+.+|+.+.|.|....+ .+.+.|++. +... .. ......|.|.
T Consensus 29 v~~~p~~v~v~~G~~v~L~C~~~~~---~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~ 105 (268)
T 3pl6_D 29 VSQTPSNKVTEKGKYVELRCDPISG---HTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKIQ 105 (268)
T ss_dssp CBCCCSEEEEETTCCEEEEEBCBTT---CCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEEC
T ss_pred eEeCCCEEEecCCCCEEEEEEeCCC---CceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEEC
Confidence 3345566788999999999987655 788999872 1110 00 0014579999
Q ss_pred cCCCCCCceEEEEEEeC-CCCceeeeEEEEEcC
Q psy11131 110 PVGREDRGIYQCIARRS-DGDVAQGSAELQLGG 141 (150)
Q Consensus 110 ~~~~~~~g~y~C~~~~~-~g~~~~~~~~l~v~~ 141 (150)
++..+|+|.|.|.+.+. ..........+.|..
T Consensus 106 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~ 138 (268)
T 3pl6_D 106 RTERGDSAVYLCATSALGDTQYFGPGTRLTVLE 138 (268)
T ss_dssp SCCGGGCEEEEEEEESSSSSCEECCCEEEEEES
T ss_pred CCCcccCEEEEEEEecCCCceeeCCcEEEEEec
Confidence 99999999999999973 111233344555554
No 458
>1n26_A IL-6 receptor alpha chain; transmembrane, glycoprotein, immunoglobulin domain, cytokine; HET: NAG BMA MAN NDG; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.2.1 b.1.2.1 PDB: 1p9m_C 2arw_A
Probab=98.66 E-value=1.5e-07 Score=62.33 Aligned_cols=79 Identities=19% Similarity=0.318 Sum_probs=58.6
Q ss_pred CCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcccCCCc-c----eeeEEEccCCCCCCceEEEEEEeCCCCceeee
Q psy11131 61 PPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQIPGRT-S----STSLVINPVGREDRGIYQCIARRSDGDVAQGS 134 (150)
Q Consensus 61 ~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~~~~~~-~----~~~l~~~~~~~~~~g~y~C~~~~~~g~~~~~~ 134 (150)
+..+.+..|+.+.|.|.+. .+. .+.+.|.+++..+.... . ...|.|.++...|.|.|.|. ..| .....
T Consensus 13 ~~~v~~~~G~~v~l~C~~~~~~~--~~~i~W~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~---~~g-~~~~~ 86 (325)
T 1n26_A 13 RGVLTSLPGDSVTLTCPGVEPED--NATVHWVLRKPAAGSHPSRWAGMGRRLLLRSVQLHDSGNYSCY---RAG-RPAGT 86 (325)
T ss_dssp TTEEEECTTCCEEEECTTSCTTC--CSEEEEEEECSSSSCCCEEEEEESSEEEECSCCGGGCEEEEEE---SSS-SCSCE
T ss_pred CCcEECCCCCcEEEEeCCCCCCC--CceEEEEECCccCCccccccccccceEEecccchhhCeEeEEE---eCC-EEeee
Confidence 3334457999999999987 431 68999999876542211 1 46899999999999999999 355 56677
Q ss_pred EEEEEcCcCcc
Q psy11131 135 AELQLGGTRNI 145 (150)
Q Consensus 135 ~~l~v~~~p~~ 145 (150)
+.|.|.++|..
T Consensus 87 ~~L~V~~pP~~ 97 (325)
T 1n26_A 87 VHLLVDVPPEE 97 (325)
T ss_dssp EEEEECCCCCC
T ss_pred EEEEeccCCCC
Confidence 88999887654
No 459
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=98.66 E-value=2.2e-08 Score=55.38 Aligned_cols=40 Identities=15% Similarity=0.146 Sum_probs=36.0
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCce
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYR 56 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~ 56 (150)
+.|.|.++..+|+|.|+|.+.|..|.....+.|.|.++|.
T Consensus 62 ~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~V~~~P~ 101 (103)
T 1wwb_X 62 GCLQLDNPTHMNNGDYTLIAKNEYGKDEKQISAHFMGWPG 101 (103)
T ss_dssp EEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECCSCCCC
T ss_pred EEEEECCCCcccCEEEEEEEEeCCCcEeEEEEEEECCCCC
Confidence 3499999999999999999999999999999999887653
No 460
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=98.66 E-value=1.7e-07 Score=56.91 Aligned_cols=77 Identities=16% Similarity=0.177 Sum_probs=56.3
Q ss_pred CcEEEecCCcEEEEEEec--CCCCCCcEEEEeec-Cccc------------CCC--cc------eeeEEEccCCCCCCce
Q psy11131 62 PLLSVHLDGSANFQCEIT--PYDSGPYLIAWFKD-GRQI------------PGR--TS------STSLVINPVGREDRGI 118 (150)
Q Consensus 62 ~~~~~~~g~~~~l~C~~~--~p~~~~~~~~w~~~-~~~~------------~~~--~~------~~~l~~~~~~~~~~g~ 118 (150)
....+.+|+.+.|.|... .+ .+.+.|++. +..+ ... .+ ...|.|.++...|+|.
T Consensus 7 ~~v~v~~G~~vtL~c~~~~~~~---~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~~~~~sL~I~~v~~~D~G~ 83 (180)
T 2dru_A 7 PNVNAITGSNVTLTILKHPLAS---YQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLDKTNGALRIYNVSKEDRGD 83 (180)
T ss_dssp CEEEEETTSCEEECCCSSCCCS---CSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEECTTTCCEEECSCCGGGCEE
T ss_pred ceEEEEeCCCEEEeCCCCCCCc---eeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEeCCCccEEEcCCCHHHCeE
Confidence 456788999999999974 44 689999884 2111 011 11 4579999999999999
Q ss_pred EEEEEEeCCCCceeeeEEEEEcCcC
Q psy11131 119 YQCIARRSDGDVAQGSAELQLGGTR 143 (150)
Q Consensus 119 y~C~~~~~~g~~~~~~~~l~v~~~p 143 (150)
|.|.+.+.. .....+.|.|.+++
T Consensus 84 Y~C~v~~~~--~~~~~~~L~V~~~~ 106 (180)
T 2dru_A 84 YYMRMLHET--EDQWKITMEVYEMV 106 (180)
T ss_dssp EEEEEESSS--EEEEEEEEEEECCC
T ss_pred EEEEEEcCC--eEEEEEEEEEECCC
Confidence 999998654 45677788887653
No 461
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=98.66 E-value=9.3e-09 Score=65.43 Aligned_cols=95 Identities=13% Similarity=0.239 Sum_probs=46.9
Q ss_pred eEEEEEeccCCcceeEEEEEEEecCceEEeCCCcEE-EecCCcEEEEEEec--C--CCCCCcEEEEeecCcccCCCc---
Q psy11131 30 GTYRCSSSNIGGEATAEVRLQVSTPYRVDVNPPLLS-VHLDGSANFQCEIT--P--YDSGPYLIAWFKDGRQIPGRT--- 101 (150)
Q Consensus 30 G~Y~C~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~-~~~g~~~~l~C~~~--~--p~~~~~~~~w~~~~~~~~~~~--- 101 (150)
|.|.|...+..+. +.....+..+......+.... +..|+.+.|.|.+. . |. ...+.|++++..+....
T Consensus 1 ~~~~~~~~~~~~~--c~~~~~~~~P~v~i~~ps~~~~l~~g~~~~L~C~v~g~~p~P~--~i~v~W~k~g~~l~~~~~~~ 76 (240)
T 4acp_A 1 GTKSCDKTHTCPP--CPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDP--EVKFNWYVDGVEVHNAKTKP 76 (240)
T ss_dssp ------------------------CEEEEECCCHHHHHSSSSCCEEEEEEESCCC--C--CCEEEEEETTEEECCCEECC
T ss_pred CceeeeeeecCCC--CCccccCCCCEEEEECcChHHhcccCCCcEEEEEEeccccCCC--ccEEEEEECCcccCCceecc
Confidence 7899998886443 222222223333334444443 45699999999998 4 31 34899999987653211
Q ss_pred -------c---eeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 102 -------S---STSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 102 -------~---~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
. .+.|.|......|.|.|.|.+.+..+
T Consensus 77 ~~~~~~g~~~~~s~L~i~~~~~~d~~~YtC~v~h~~~ 113 (240)
T 4acp_A 77 REEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKAL 113 (240)
T ss_dssp CEEC---CEEEEEEEECCHHHHHHTCCEEEEEECC--
T ss_pred ceECCCCeEEEEEEEEEechhccCCCEEEEEEEcCCC
Confidence 0 24566666656678999999998765
No 462
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=98.66 E-value=1.5e-07 Score=60.16 Aligned_cols=82 Identities=12% Similarity=0.278 Sum_probs=50.5
Q ss_pred EEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecC--cccC-----C----------------------CcceeeE
Q psy11131 57 VDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDG--RQIP-----G----------------------RTSSTSL 106 (150)
Q Consensus 57 ~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~--~~~~-----~----------------------~~~~~~l 106 (150)
+...+....+.+|+.+.|.|.+. .+ .+.+.|++.. .... . ......|
T Consensus 5 v~~~p~~~~v~~G~~v~L~C~~~~~~---~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L 81 (259)
T 3omz_A 5 LEGRTKSVIRQTGSSAEITCDLAEGS---TGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRM 81 (259)
T ss_dssp ------CEEEETTCCEEEECCC--------CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEE
T ss_pred cccCCceeEecCCCcEEEEEEEccCC---CcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEE
Confidence 44456677889999999999998 77 8899998731 1100 0 0003469
Q ss_pred EEccCCCCCCceEEEEEEeCCCC--ceeeeEEEEEcC
Q psy11131 107 VINPVGREDRGIYQCIARRSDGD--VAQGSAELQLGG 141 (150)
Q Consensus 107 ~~~~~~~~~~g~y~C~~~~~~g~--~~~~~~~l~v~~ 141 (150)
.|.++..+|+|.|.|.+.+..+. .......|.|..
T Consensus 82 ~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~ 118 (259)
T 3omz_A 82 ILRNLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTD 118 (259)
T ss_dssp EESSCCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC
T ss_pred EECCCCcccCEEEEEEEeeCCccccEECCCCEEEEec
Confidence 99999999999999999986541 223344555554
No 463
>3khq_A B-cell antigen receptor complex-associated protei chain; CD79B, CD79A, IG-beta, BCR, IG domain, V-SET, immunoglobulin protein binding; HET: FLC GSH; 1.70A {Mus musculus} PDB: 3kho_A*
Probab=98.65 E-value=1.9e-07 Score=53.99 Aligned_cols=84 Identities=20% Similarity=0.357 Sum_probs=54.8
Q ss_pred EEeCCCcEEEecCCcEEEEEEecCCCCCCcEEEEeecC--ccc---C-CCcc--------eeeEEEccCCCCCCceEEEE
Q psy11131 57 VDVNPPLLSVHLDGSANFQCEITPYDSGPYLIAWFKDG--RQI---P-GRTS--------STSLVINPVGREDRGIYQCI 122 (150)
Q Consensus 57 ~~~~~~~~~~~~g~~~~l~C~~~~p~~~~~~~~w~~~~--~~~---~-~~~~--------~~~l~~~~~~~~~~g~y~C~ 122 (150)
+...|....+.+|+.+.|.|... . .+.+.|+++. ... . ...+ ...|.|.++..+|+|.|.|.
T Consensus 20 v~q~p~~~~v~~G~~v~L~C~~~-~---~~~v~W~r~~~g~~~~~l~~~~~r~~~~~~~~~~~L~I~~~~~~DsG~Y~C~ 95 (133)
T 3khq_A 20 IWQHPRFAAKKRSSMVKFHCYTN-H---SGALTWFRKRGSQQPQELVSEEGRIVQTQNGSVYTLTIQNIQYEDNGIYFCK 95 (133)
T ss_dssp EEEECSEEEECTTCCEEEEEEES-S---SSCEEEEEECTTSCCEECCCTTTTEEEEEETTEEEEEECSCCGGGCEEEEEE
T ss_pred eEEcCceEEEeCCCeEEEEEEeC-C---CCEEEEEEeCCCCCCEEEEEeCCCEEEEcCCCEEEEEECCCChHHCEEEEEE
Confidence 34456677889999999999986 1 1578999863 211 1 1111 34699999999999999999
Q ss_pred EEeCCCC---ceeeeEEEEEcCcCc
Q psy11131 123 ARRSDGD---VAQGSAELQLGGTRN 144 (150)
Q Consensus 123 ~~~~~g~---~~~~~~~l~v~~~p~ 144 (150)
+.|..|. .......|.|.+.|.
T Consensus 96 a~n~~g~~~~~~g~gt~L~V~~~p~ 120 (133)
T 3khq_A 96 QKCDSANHNVTDSCGTELLVLGFST 120 (133)
T ss_dssp ESSCC-------CCCEEEEEC----
T ss_pred EEeCCCCcceeECCCEEEEEEeccc
Confidence 9987641 123445677777553
No 464
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=98.65 E-value=2.5e-07 Score=58.33 Aligned_cols=66 Identities=15% Similarity=0.352 Sum_probs=47.8
Q ss_pred eCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecC--cc-----------------cCCC-------cceeeEEEccC
Q psy11131 59 VNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDG--RQ-----------------IPGR-------TSSTSLVINPV 111 (150)
Q Consensus 59 ~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~--~~-----------------~~~~-------~~~~~l~~~~~ 111 (150)
..+....+.+|+.+.|.|. . .| .+.+.|+++. .. .... .....|.|.++
T Consensus 5 q~p~~~~v~~G~~v~L~C~-~~~~---~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v 80 (238)
T 2p1y_A 5 QSPRNKVAVTGGKVTLSCN-QTNN---HNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELA 80 (238)
T ss_dssp EECSEEEEETTCCEEEEEE-ECSC---CSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSC
T ss_pred ECccceEEeCCCEEEEEee-cCCC---CccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecC
Confidence 3456678899999999999 6 77 8999999851 10 0000 01347999999
Q ss_pred CCCCCceEEEEEEeCCC
Q psy11131 112 GREDRGIYQCIARRSDG 128 (150)
Q Consensus 112 ~~~~~g~y~C~~~~~~g 128 (150)
..+|+|.|.|.+.+..|
T Consensus 81 ~~~DsG~Y~C~~~~~~g 97 (238)
T 2p1y_A 81 TPSQTSVYFCASGDLGQ 97 (238)
T ss_dssp CGGGCEEEEEEEEC---
T ss_pred CcccCeeEEEEEEeCCC
Confidence 99999999999998754
No 465
>3moq_A NEW antigen receptor variable domain, P3(40) PEPT amyloid beta A4 protein; AB-ignar, AB-12Y-2, glycoprotein, membran protease inhibitor; 2.05A {Orectolobus maculatus} PDB: 2z8w_C 2z8v_C 1ves_A 1ver_A
Probab=98.65 E-value=2.9e-07 Score=52.73 Aligned_cols=68 Identities=25% Similarity=0.323 Sum_probs=50.3
Q ss_pred EEeCCCcEEEecCCcEEEEEEec-C--CCCCCcEEEEeec--Cccc----CCCc----------ceeeEEEccCCCCCCc
Q psy11131 57 VDVNPPLLSVHLDGSANFQCEIT-P--YDSGPYLIAWFKD--GRQI----PGRT----------SSTSLVINPVGREDRG 117 (150)
Q Consensus 57 ~~~~~~~~~~~~g~~~~l~C~~~-~--p~~~~~~~~w~~~--~~~~----~~~~----------~~~~l~~~~~~~~~~g 117 (150)
+...|....+.+|+.+.|.|... . + .+.+.|++. +... .... ....|.|.++..+|+|
T Consensus 3 V~Q~p~~v~v~~G~svtL~C~~s~~~~~---~~~v~Wyrq~~g~~~~~li~~~~R~~~~~~~~~~~~sL~I~~v~~~DsG 79 (126)
T 3moq_A 3 VDQTPRTATKETGESLTINCVLRDASFE---LKDTGWYRTKLGSTNEQSISIGGRYVETVNKGSKSFSLRISDLRVEDSG 79 (126)
T ss_dssp EEEECSEEEEETTCCEEEEEEEESCSSC---CCEEEEEEEETTCCCCEECCCBTTEEEEEETTTTEEEEEECSCCGGGCE
T ss_pred eEECCceEEEeCCCCEEEEEEeecCccC---CceEEEEEeCCCCCceEEEEeCCcEEEEEeCCCCEEEEEECcCChHhCE
Confidence 34456677889999999999987 4 4 678999874 2211 1111 1457999999999999
Q ss_pred eEEEEEEeCC
Q psy11131 118 IYQCIARRSD 127 (150)
Q Consensus 118 ~y~C~~~~~~ 127 (150)
.|.|.+.+..
T Consensus 80 ~Y~C~~~~~~ 89 (126)
T 3moq_A 80 TYKCQAFYVF 89 (126)
T ss_dssp EEEEEEEEEE
T ss_pred EEEEEEEEcC
Confidence 9999998754
No 466
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=98.64 E-value=2.8e-07 Score=58.39 Aligned_cols=66 Identities=18% Similarity=0.350 Sum_probs=49.4
Q ss_pred eCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeec----------------CcccCCC---cc---------eeeEEEc
Q psy11131 59 VNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKD----------------GRQIPGR---TS---------STSLVIN 109 (150)
Q Consensus 59 ~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~----------------~~~~~~~---~~---------~~~l~~~ 109 (150)
..+....+.+|+.+.|.|.+. .+ .+.+.|++. +...... .+ ...|.|.
T Consensus 6 ~~p~~~~v~~G~~v~L~C~~~~~~---~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~ 82 (246)
T 4dzb_B 6 QHPSWVISKSGTSVKIECRSLDFQ---ATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVT 82 (246)
T ss_dssp EECSEEEEETTSCEEEEEEESSSC---CCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEEC
T ss_pred ECCcEEEEeCCCcEEEEeEecCCC---ceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEEC
Confidence 345667889999999999998 77 889999882 1111111 11 2379999
Q ss_pred cCCCCCCceEEEEEEeCC
Q psy11131 110 PVGREDRGIYQCIARRSD 127 (150)
Q Consensus 110 ~~~~~~~g~y~C~~~~~~ 127 (150)
++..+|+|.|.|.+.+..
T Consensus 83 ~v~~~D~G~Y~C~~~~~~ 100 (246)
T 4dzb_B 83 SAHPEDSSFYICSARTSG 100 (246)
T ss_dssp SCCGGGCEEEEEEECCSS
T ss_pred CCCHHHCEEEEEEEecCC
Confidence 999999999999998653
No 467
>2coq_A NEW antigen receptor variable domain; IG VNAR, natural TYPE2, immune system; 2.10A {Orectolobus maculatus}
Probab=98.64 E-value=2e-07 Score=51.86 Aligned_cols=64 Identities=25% Similarity=0.416 Sum_probs=47.8
Q ss_pred eCCCcEEEecCCcEEEEEEec-C--CCCCCcEEEEeecC--cc----cCCCc----------ceeeEEEccCCCCCCceE
Q psy11131 59 VNPPLLSVHLDGSANFQCEIT-P--YDSGPYLIAWFKDG--RQ----IPGRT----------SSTSLVINPVGREDRGIY 119 (150)
Q Consensus 59 ~~~~~~~~~~g~~~~l~C~~~-~--p~~~~~~~~w~~~~--~~----~~~~~----------~~~~l~~~~~~~~~~g~y 119 (150)
..|....+.+|+.+.|.|... . + .+.+.|++.. .. +.... ....|.|.++..+|+|.|
T Consensus 5 q~p~~~~v~~G~~v~L~C~~~~~~~~---~~~v~W~r~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~~~~~DsG~Y 81 (108)
T 2coq_A 5 QTPRIATKETGESLTINCVLRDTACA---LDSTNWYRTKLGSTKEQTISIGGRYSETVDEGSNSASLTIRDLRVEDSGTY 81 (108)
T ss_dssp EECSEEEECTTCCEEEEEEECCSSEE---EEEEEEEEEETTCCCEEECCCBTTEEEEEETTTTEEEEEECSCCGGGCEEE
T ss_pred eCCceEEEcCCCCEEEEeEeCCCcCC---CCEEEEEEcCCCCCcEEEEEeCCceEEEEcCCCCEEEEEECCCCcccCEEE
Confidence 345667888999999999987 3 3 5789998753 21 11111 145799999999999999
Q ss_pred EEEEEe
Q psy11131 120 QCIARR 125 (150)
Q Consensus 120 ~C~~~~ 125 (150)
.|.+.+
T Consensus 82 ~C~~~~ 87 (108)
T 2coq_A 82 KCKAYR 87 (108)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 999987
No 468
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=98.64 E-value=1e-07 Score=52.35 Aligned_cols=50 Identities=28% Similarity=0.358 Sum_probs=40.3
Q ss_pred ecCCCCceEEeC----CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecC
Q psy11131 5 LVLPGPRTRVLG----PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTP 54 (150)
Q Consensus 5 ~~~~~~~~~~~~----~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~ 54 (150)
++..+.++.+.. ..|.|.++..+|+|.|+|.+.|..|..+..+.|.|.+.
T Consensus 48 ~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~ 101 (103)
T 3qp3_A 48 ELQESSKIHYTNTSGVLTLEILDCHTDDSGTYRAVCTNYKGEASDYATLDVTGG 101 (103)
T ss_dssp ECCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred ECCCCCCEEEEECCCEEEEEEcCCCcccCEEEEEEEEeCCCcEEEEEEEEEECC
Confidence 344445655544 46999999999999999999999999988899988764
No 469
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=98.64 E-value=5.1e-08 Score=55.78 Aligned_cols=40 Identities=20% Similarity=0.169 Sum_probs=36.3
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCce
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYR 56 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~ 56 (150)
+.|.|.+++..|+|.|+|.|.|..|...+.+.|.|...|.
T Consensus 63 ~~L~i~~~~~~D~G~YtC~A~N~~G~~~~t~~l~v~~~P~ 102 (126)
T 1he7_A 63 GCLRLNQPTHVNNGNYTLLAANPFGQASASIMAAFMDNPF 102 (126)
T ss_dssp EEEEEESCCGGGCEEEEEEEEETTEEEEEEEEECCCSCTT
T ss_pred eEEEECcCCCCCCEEEEEEEEECCCeEEEEEEEEEEcCCC
Confidence 5799999999999999999999999999999998887653
No 470
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=98.63 E-value=4.3e-07 Score=57.83 Aligned_cols=85 Identities=21% Similarity=0.318 Sum_probs=56.3
Q ss_pred EEeCCCcEEEecCCcEEEEEEec-CCCC--CCcEEEEeecCc--cc------------CCCcc--------eeeEEEccC
Q psy11131 57 VDVNPPLLSVHLDGSANFQCEIT-PYDS--GPYLIAWFKDGR--QI------------PGRTS--------STSLVINPV 111 (150)
Q Consensus 57 ~~~~~~~~~~~~g~~~~l~C~~~-~p~~--~~~~~~w~~~~~--~~------------~~~~~--------~~~l~~~~~ 111 (150)
+...+....+.+|+.+.|.|.+. .+.. ..+.+.|++++. .. ....+ ...|.|.++
T Consensus 37 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 116 (252)
T 3bkj_L 37 MTQTPLSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLRISRV 116 (252)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSC
T ss_pred EEeCCceEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEEECCC
Confidence 33445667789999999999998 4300 037899988541 11 00111 237999999
Q ss_pred CCCCCceEEEEEEeCCCCceeeeEEEEEcC
Q psy11131 112 GREDRGIYQCIARRSDGDVAQGSAELQLGG 141 (150)
Q Consensus 112 ~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~ 141 (150)
..+|.|.|.|.+.+..+........+.|..
T Consensus 117 ~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~ 146 (252)
T 3bkj_L 117 EAEDLGVYYCFQASLVPLTFGAGTKLELKR 146 (252)
T ss_dssp CGGGCEEEEEEECSBSSCEECCCEEEEECC
T ss_pred CcccCEEEEEEEEcCCccEECCCEEEEEeC
Confidence 999999999999886552223334566654
No 471
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=98.63 E-value=2.8e-07 Score=58.49 Aligned_cols=84 Identities=24% Similarity=0.399 Sum_probs=55.8
Q ss_pred eCCCcEEEecCCcEEEEEEec-CCCC--CCcEEEEeecC--cccC------------CCcc--------eeeEEEccCCC
Q psy11131 59 VNPPLLSVHLDGSANFQCEIT-PYDS--GPYLIAWFKDG--RQIP------------GRTS--------STSLVINPVGR 113 (150)
Q Consensus 59 ~~~~~~~~~~g~~~~l~C~~~-~p~~--~~~~~~w~~~~--~~~~------------~~~~--------~~~l~~~~~~~ 113 (150)
..|....+.+|+.+.|.|.+. .|.. ..+.+.|++.. ..+. ...+ ...|.|.++..
T Consensus 6 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 85 (247)
T 1svz_A 6 QTPLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEA 85 (247)
T ss_dssp EECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred ecCCeEEecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEECCCCH
Confidence 345667889999999999998 5400 03789998742 1110 0111 24799999999
Q ss_pred CCCceEEEEEEeCCCCceeeeEEEEEcCc
Q psy11131 114 EDRGIYQCIARRSDGDVAQGSAELQLGGT 142 (150)
Q Consensus 114 ~~~g~y~C~~~~~~g~~~~~~~~l~v~~~ 142 (150)
+|+|.|.|.+.+..+........|.|..+
T Consensus 86 ~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~ 114 (247)
T 1svz_A 86 EDLGIYYCFQGSHFPPTFGGGTKLEIKGG 114 (247)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEEC--
T ss_pred HHCEEEEEEEccCCccEECCCEEEEEECC
Confidence 99999999999875422334456677654
No 472
>1i3g_L Antibody FV fragment; antibiotic; 2.44A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy6_A
Probab=98.63 E-value=4.4e-07 Score=50.71 Aligned_cols=67 Identities=18% Similarity=0.329 Sum_probs=49.6
Q ss_pred EEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCc--c---cC---------CCcc--------eeeEEEccCCC
Q psy11131 57 VDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGR--Q---IP---------GRTS--------STSLVINPVGR 113 (150)
Q Consensus 57 ~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~--~---~~---------~~~~--------~~~l~~~~~~~ 113 (150)
+...|..+.+.+|+.+.|.|... .+ .+.+.|++... . +. ...+ ...|.|.++..
T Consensus 7 v~q~p~~~~~~~G~~v~L~C~~~~~~---~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~ 83 (111)
T 1i3g_L 7 LTQSHKFMSTSVGDRVSITCKASQDV---GTAVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTDFTLTISNVQS 83 (111)
T ss_dssp EEESCSEEECCTTCCEEEEEEESSCC---TTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred EEEeCCEEEEcCCCCEEEEEEeCCCC---CCCEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEcCCCEEEEEECCCCH
Confidence 33456667788999999999998 66 67899987532 1 10 0111 34799999999
Q ss_pred CCCceEEEEEEeC
Q psy11131 114 EDRGIYQCIARRS 126 (150)
Q Consensus 114 ~~~g~y~C~~~~~ 126 (150)
+|+|.|.|.+.+.
T Consensus 84 ~DsG~Y~C~~~~~ 96 (111)
T 1i3g_L 84 EDLADYFCQQYSS 96 (111)
T ss_dssp GGCSEEEEEECSS
T ss_pred HHCEEEEEEEecC
Confidence 9999999999864
No 473
>2nms_A CMRF35-like-molecule 1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, inhibitory receptor, myelo-monocytic cells; 2.60A {Homo sapiens}
Probab=98.63 E-value=1.4e-06 Score=49.71 Aligned_cols=82 Identities=13% Similarity=0.275 Sum_probs=56.3
Q ss_pred CCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCcc------cC-CC-------cc----------eeeEEEccCCCC
Q psy11131 60 NPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGRQ------IP-GR-------TS----------STSLVINPVGRE 114 (150)
Q Consensus 60 ~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~~------~~-~~-------~~----------~~~l~~~~~~~~ 114 (150)
.+..+.+.+|+.+.|.|... ... ...+.|++.... +. .. .+ ...|.|.++..+
T Consensus 8 ~p~~v~~~~G~svtL~C~~s~~~~--~~~~~W~rq~~~~~~~~li~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~l~~~ 85 (124)
T 2nms_A 8 GPTTVNGLERGSLTVQCVYRSGWE--TYLKWWCRGAIWRDCKILVKTSGSEQEVKRDRVSIKDNQKNRTFTVTMEDLMKT 85 (124)
T ss_dssp CCSEEEEETTCCEEEEEEECTTCT--TSEEEEEESSSSTTCEEEEECCSSSCCEEETTEEEEEETTTTEEEEEECSCCGG
T ss_pred cccEEEEeCCCCEEEEeEEeCCcc--cccEEEEeCCCCCCceEEEEcCCcccceeCCCEEEEEcCcCCEEEEEEeCCCHH
Confidence 35567788999999999987 321 347889874321 00 00 00 357999999999
Q ss_pred CCceEEEEEEeCCCCceeeeEEEEEcCcCc
Q psy11131 115 DRGIYQCIARRSDGDVAQGSAELQLGGTRN 144 (150)
Q Consensus 115 ~~g~y~C~~~~~~g~~~~~~~~l~v~~~p~ 144 (150)
|+|.|.|.+..... .....+.|.|..+|.
T Consensus 86 Dsg~Y~C~~~~~~~-~~~~~v~L~V~~~~~ 114 (124)
T 2nms_A 86 DADTYWCGIEKTGN-DLGVTVQVTIDPAPV 114 (124)
T ss_dssp GCEEEEEEEEETTE-EEEEEEEEEEECCC-
T ss_pred HCEEEEEEEEcCCC-CccEEEEEEEeCCCc
Confidence 99999999986543 455667888876554
No 474
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.63 E-value=1.2e-07 Score=55.26 Aligned_cols=45 Identities=31% Similarity=0.483 Sum_probs=37.7
Q ss_pred CCCceEEeC----CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEe
Q psy11131 8 PGPRTRVLG----PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVS 52 (150)
Q Consensus 8 ~~~~~~~~~----~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~ 52 (150)
.+.|+.+.. ..|.|.++..+|+|.|+|.+.|..|.....+.|.|.
T Consensus 90 ~~~r~~i~~~~~~s~L~I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V~ 138 (139)
T 1gxe_A 90 TEGRVRVETTKDRSIFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKVI 138 (139)
T ss_dssp CSSSCEEEEETTEEEEECSCCCTTTCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred CCCeEEEEeCCCEEEEEECCCCcccCEEEEEEEEeCCceEEEEEEEEEE
Confidence 445665543 369999999999999999999999998888888875
No 475
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=98.62 E-value=1.7e-08 Score=63.11 Aligned_cols=61 Identities=13% Similarity=0.277 Sum_probs=48.0
Q ss_pred EecCCcEEEEEEec-C---CCCCCcEEEEeecCcccCCCc----------c---eeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 66 VHLDGSANFQCEIT-P---YDSGPYLIAWFKDGRQIPGRT----------S---STSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 66 ~~~g~~~~l~C~~~-~---p~~~~~~~~w~~~~~~~~~~~----------~---~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
+.+|+.+.|.|.+. . |. .+.+.|++++..+.... . ...|.|.++..+|.|.|.|.+.+..+
T Consensus 23 v~~G~~v~L~C~~~g~~~~p~--~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~g~Y~C~~~~~~~ 100 (218)
T 2rgs_A 23 LMISLTPKVTCVVVDVSEDDP--DVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDWMSGKEFKCKVNNKDL 100 (218)
T ss_dssp HCTTSCCEEEEEEEEECTTSC--CEEEEEEETTEEECCCEEEEEEETTTTEEEEEEEEECCHHHHHTTCCEEEEEEETTC
T ss_pred hccCCCeeEEEEEcCCccCCC--ceEEEEEECCccccCcccccccccCCCeEEEEEEEEEcHHHcCCCCeEEEEEECCcC
Confidence 67899999999998 4 51 38999999886653221 0 34688889999999999999999876
No 476
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=98.62 E-value=6.2e-08 Score=53.91 Aligned_cols=36 Identities=25% Similarity=0.315 Sum_probs=33.6
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEe
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVS 52 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~ 52 (150)
.+|.|.+++.+|+|.|+|.+.|..|..++.+.|.|.
T Consensus 72 ~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~V~ 107 (108)
T 3cx2_A 72 FELHITDAQPAFTGSYRCEVSTKDKFDCSNFNLTVH 107 (108)
T ss_dssp EEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred EEEEEecCCCccCEEEEEEEecCCCceEEEEEEEEe
Confidence 579999999999999999999999999999999886
No 477
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=98.61 E-value=2.8e-08 Score=62.49 Aligned_cols=68 Identities=15% Similarity=0.256 Sum_probs=38.6
Q ss_pred EeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCc--cc------------CCCcc--------eeeEEEccCCCC
Q psy11131 58 DVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGR--QI------------PGRTS--------STSLVINPVGRE 114 (150)
Q Consensus 58 ~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~--~~------------~~~~~--------~~~l~~~~~~~~ 114 (150)
...+....+.+|+.+.|.|.+. .| .+.+.|+++.. .. ....+ ...|.|.++..+
T Consensus 27 ~~~p~~~~v~~G~~v~L~C~~~~~~---~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 103 (233)
T 3bqu_C 27 TQSPASLSMSIGEKVTIRCITSTDI---DDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENMLSE 103 (233)
T ss_dssp EEECSBC-------CCEEEEEEEEE---SSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC-----CC
T ss_pred EEcCCeEEEecCCCEEEEEecCCcC---CCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCCCHH
Confidence 3345566788999999999998 77 67799987532 11 00011 237999999999
Q ss_pred CCceEEEEEEeCCC
Q psy11131 115 DRGIYQCIARRSDG 128 (150)
Q Consensus 115 ~~g~y~C~~~~~~g 128 (150)
|+|.|.|.+.+..+
T Consensus 104 D~G~Y~C~~~~~~~ 117 (233)
T 3bqu_C 104 DVADYYCLQSDNLP 117 (233)
T ss_dssp CCSEEEEEECSSSS
T ss_pred HCEEEEEEEecCCc
Confidence 99999999987654
No 478
>3kg5_A B-cell antigen receptor complex-associated protei chain; CD79B, IG-beta, BCR, immunoglobulin domain, protein binding; 3.20A {Homo sapiens}
Probab=98.61 E-value=4.9e-07 Score=52.36 Aligned_cols=86 Identities=17% Similarity=0.310 Sum_probs=55.3
Q ss_pred EeCCCcEEEecCCcEEEEEEecCCCCCCcEEEEeec---CcccC----CCc--------ceeeEEEccCCCCCCceEEEE
Q psy11131 58 DVNPPLLSVHLDGSANFQCEITPYDSGPYLIAWFKD---GRQIP----GRT--------SSTSLVINPVGREDRGIYQCI 122 (150)
Q Consensus 58 ~~~~~~~~~~~g~~~~l~C~~~~p~~~~~~~~w~~~---~~~~~----~~~--------~~~~l~~~~~~~~~~g~y~C~ 122 (150)
...|....+.+|+.+.|.|..... ...+.|++. +.... ... ....|.|.++..+|+|.|.|.
T Consensus 22 ~Q~p~~~~v~~G~svtL~C~~s~~---~~~v~Wyrq~~~g~~~~~l~~~~~rf~~~~~~~~~~L~I~~~~~~Dsg~Y~C~ 98 (134)
T 3kg5_A 22 WQSPRFIARKRGFTVKMHCYMNSA---SGNVSWLWKQEMDENPQQLKLEKGRMEESQNESLATLTIQGIRFEDNGIYFCQ 98 (134)
T ss_dssp EEECSEEEEETTCCEEEEEECCCT---TCCCEEEEESSSSSCCEECCCCTTTEEEEECSSEEEEEECSCCTTTCEEEEEE
T ss_pred EEeCCEEEEeCCCCEEEEEEECCC---CceEEEEEECCCCCCcEEEEEECCeEEEEccCCEEEEEECCCCcCcCEEEEEE
Confidence 345666788999999999998732 456889876 32211 011 146799999999999999999
Q ss_pred EEeCCCC--ceeeeEEEEEcCcCccc
Q psy11131 123 ARRSDGD--VAQGSAELQLGGTRNIK 146 (150)
Q Consensus 123 ~~~~~g~--~~~~~~~l~v~~~p~~~ 146 (150)
+.+..+. ....-..|.|.+.|...
T Consensus 99 ~~~~~~~~~~fg~GT~L~V~~~p~~~ 124 (134)
T 3kg5_A 99 QKCNNTSEVYQGCGTELRVMGFSTLA 124 (134)
T ss_dssp EECTTTCCEEECCCEEEEEECC----
T ss_pred EEcCCCCceEECCCEEEEEecCCCHH
Confidence 9875221 11223456666655443
No 479
>1eeq_A Kappa-4 immunoglobulin (light chain); protein stability, hydrogen bonds, immune system; 1.50A {Homo sapiens} SCOP: b.1.1.1 PDB: 1eeu_A 1lve_A 2lve_A 3lve_A 5lve_A 4lve_A 1efq_A 1qac_A 1ek3_A 2imm_A 1mvu_A 2ap2_A 1ap2_A 3bd3_A* 3bd4_A* 3bd5_A* 2imn_A 3dus_A* 3duu_A* 3dv4_A* ...
Probab=98.60 E-value=6.7e-07 Score=50.18 Aligned_cols=68 Identities=22% Similarity=0.388 Sum_probs=47.8
Q ss_pred eCCCcEEEecCCcEEEEEEec-CCC---CCCcEEEEeecC--ccc------------CCCcc--------eeeEEEccCC
Q psy11131 59 VNPPLLSVHLDGSANFQCEIT-PYD---SGPYLIAWFKDG--RQI------------PGRTS--------STSLVINPVG 112 (150)
Q Consensus 59 ~~~~~~~~~~g~~~~l~C~~~-~p~---~~~~~~~w~~~~--~~~------------~~~~~--------~~~l~~~~~~ 112 (150)
..|..+.+.+|+.+.|.|... .+. ...+.+.|++.. ... ....+ ...|.|.++.
T Consensus 6 q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 85 (114)
T 1eeq_A 6 QSPDSLAVSLGERATINCKSSQSVLDSSNSKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQ 85 (114)
T ss_dssp EECSEEEECTTSCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC
T ss_pred ecCCeEEEcCCCeEEEEEEcCCCccccccCCccEEEEEECCCCCCEEEEEecCccCCCCCCCEEEeecCCEEEEEECCCC
Confidence 345667889999999999987 540 002689998753 111 00111 3479999999
Q ss_pred CCCCceEEEEEEeC
Q psy11131 113 REDRGIYQCIARRS 126 (150)
Q Consensus 113 ~~~~g~y~C~~~~~ 126 (150)
.+|+|.|.|.+.+.
T Consensus 86 ~~DsG~Y~C~~~~~ 99 (114)
T 1eeq_A 86 AEDVAVYYCQQYYS 99 (114)
T ss_dssp GGGCEEEEEEECSS
T ss_pred cccCEEEEEEEeeC
Confidence 99999999999864
No 480
>4ffy_L DENV1-E111 single chain variable fragment (light; viral envelope proteins, structural genomics, antibody epito flavivirus, niaid; 2.50A {Mus musculus}
Probab=98.59 E-value=5.4e-07 Score=51.54 Aligned_cols=85 Identities=22% Similarity=0.424 Sum_probs=54.9
Q ss_pred EeCCCcEEEecCCcEEEEEEec-CC-CCCCcEEEEeecC--cccC------------CCcc--------eeeEEEccCCC
Q psy11131 58 DVNPPLLSVHLDGSANFQCEIT-PY-DSGPYLIAWFKDG--RQIP------------GRTS--------STSLVINPVGR 113 (150)
Q Consensus 58 ~~~~~~~~~~~g~~~~l~C~~~-~p-~~~~~~~~w~~~~--~~~~------------~~~~--------~~~l~~~~~~~ 113 (150)
...|..+.+.+|+.+.|.|... .+ ....+.+.|++.. .... ...+ ...|.|.++..
T Consensus 5 ~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~sL~I~~v~~ 84 (126)
T 4ffy_L 5 TQSPASLAVSLGQRATISCRASESVDHYGNSFIYWYQQKPGQPPKLLIYLASNLESGVPARFSGSGSETDFTLTIDSVET 84 (126)
T ss_dssp EEECSEEEEETTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCG
T ss_pred EeCCCeEEEeCCCCEEEEEecCCCcccCCCceEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEecCCCEEEEEECCCCH
Confidence 3446667889999999999997 43 0004578998742 1110 0001 45799999999
Q ss_pred CCCceEEEEEEeCCCCceeeeEEEEEcCc
Q psy11131 114 EDRGIYQCIARRSDGDVAQGSAELQLGGT 142 (150)
Q Consensus 114 ~~~g~y~C~~~~~~g~~~~~~~~l~v~~~ 142 (150)
+|+|.|.|.+.+........-..|.|.+.
T Consensus 85 ~DsG~Y~C~~~~~~~~~fg~gT~L~V~~~ 113 (126)
T 4ffy_L 85 DDAATYYCQQNNEDPYTFGGGTKLEIKGG 113 (126)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEEEC-
T ss_pred HHCEEEEEEEecCCCcEECCCEEEEEecC
Confidence 99999999998754322233345666543
No 481
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.59 E-value=7.6e-08 Score=54.32 Aligned_cols=47 Identities=30% Similarity=0.388 Sum_probs=39.3
Q ss_pred CCceEEeC-CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCc
Q psy11131 9 GPRTRVLG-PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPY 55 (150)
Q Consensus 9 ~~~~~~~~-~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~ 55 (150)
+.++.... +.|.|.+++.+|+|.|+|.+.|..|.....+.|.|..++
T Consensus 53 ~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~ 100 (118)
T 2eo9_A 53 DSRIKQLENGVLQIRYAKLGDTGRYTCIASTPSGEATWSAYIEVQEFG 100 (118)
T ss_dssp STTEEEEETTEEEEESCCGGGCCCEEEEEECSSCEEEEECCEEEECCS
T ss_pred CCeEEEccCCEEEEccCCcCCCEEEEEEEEcCCCcEEEEEEEEEEeCC
Confidence 44554443 889999999999999999999999988888889988654
No 482
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=98.59 E-value=1.7e-07 Score=51.00 Aligned_cols=37 Identities=35% Similarity=0.400 Sum_probs=33.6
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEec
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVST 53 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~ 53 (150)
..|.|.++..+|+|.|+|.+.|..|.....+.|.|.+
T Consensus 62 ~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~ 98 (99)
T 1g1c_A 62 CELVIRDVTGEDSASIMVKAINIAGETSSHAFLLVQA 98 (99)
T ss_dssp EEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEECCCCcCCCEEEEEEEEECCCcEEEEEEEEEec
Confidence 3799999999999999999999999888888888864
No 483
>1pew_A JTO2, A lambda-6 type immunoglobulin light chain, domain; beta sheet, immune system; 1.60A {Homo sapiens} SCOP: b.1.1.1 PDB: 1cd0_A 1pw3_A 2cd0_A 2w0k_A 3b5g_A 3bdx_A* 2w0l_A
Probab=98.59 E-value=5e-07 Score=50.27 Aligned_cols=64 Identities=19% Similarity=0.325 Sum_probs=46.4
Q ss_pred CCcEEEecCCcEEEEEE-ec-CCCCCCcEEEEeecCcccC------------CCcc----------eeeEEEccCCCCCC
Q psy11131 61 PPLLSVHLDGSANFQCE-IT-PYDSGPYLIAWFKDGRQIP------------GRTS----------STSLVINPVGREDR 116 (150)
Q Consensus 61 ~~~~~~~~g~~~~l~C~-~~-~p~~~~~~~~w~~~~~~~~------------~~~~----------~~~l~~~~~~~~~~ 116 (150)
|....+.+|+++.|.|. .. .+. .+.+.|++...... ...+ ...|.|.++..+|+
T Consensus 7 p~~~~v~~G~~v~L~C~v~~~~~~--~~~v~W~r~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~Ds 84 (109)
T 1pew_A 7 PHSVSESPGKTVTISCTRSSGNIA--SNYVQWYQQRSAPITVIYEDNQRPSGVPDRFAGSIDRSSNSASLTISGLKTEDE 84 (109)
T ss_dssp CSEEEECTTSCEEEEEEESSSCGG--GSCCEEEEC-CCCEEEEBTTTBCCTTCCTTEEEEEETTTTEEEEEECSCCGGGC
T ss_pred CCCEEEcCCCCEEEEEEeCCCCCC--CccEEEEEECCCCcEEEEecCCcCCCCCCcEEEEeccCCCEEEEEECCCChhhC
Confidence 56678899999999999 66 431 36799987652110 0011 34799999999999
Q ss_pred ceEEEEEEeC
Q psy11131 117 GIYQCIARRS 126 (150)
Q Consensus 117 g~y~C~~~~~ 126 (150)
|.|.|.+.+.
T Consensus 85 G~Y~C~~~~~ 94 (109)
T 1pew_A 85 ADYYCQSYDA 94 (109)
T ss_dssp EEEEEEEEET
T ss_pred EEEEEEEEeC
Confidence 9999999874
No 484
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=98.58 E-value=6.2e-07 Score=57.64 Aligned_cols=86 Identities=17% Similarity=0.296 Sum_probs=57.5
Q ss_pred EEeCCCcEEEecCCcEEEEEEec-CCCC---CCcEEEEeecC--cccC------------CCcc--------eeeEEEcc
Q psy11131 57 VDVNPPLLSVHLDGSANFQCEIT-PYDS---GPYLIAWFKDG--RQIP------------GRTS--------STSLVINP 110 (150)
Q Consensus 57 ~~~~~~~~~~~~g~~~~l~C~~~-~p~~---~~~~~~w~~~~--~~~~------------~~~~--------~~~l~~~~ 110 (150)
+...|..+.+.+|+.+.|.|.+. .+.. ..+.+.|++.. ..+. ...+ ...|.|.+
T Consensus 8 v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~ 87 (264)
T 2gjj_A 8 LTQTPSSLPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFTLTIGS 87 (264)
T ss_dssp EEEECSEEEEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESS
T ss_pred eEecCCeEEecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEEEEECC
Confidence 34456677889999999999987 4400 04689998752 2110 0111 34799999
Q ss_pred CCCCCCceEEEEEEeCCCCceeeeEEEEEcCc
Q psy11131 111 VGREDRGIYQCIARRSDGDVAQGSAELQLGGT 142 (150)
Q Consensus 111 ~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~ 142 (150)
+..+|+|.|.|.+.+..+........|.|..+
T Consensus 88 v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~ 119 (264)
T 2gjj_A 88 VKAEDLAVYYCQQYSNYPWTFGGGTRLEIKRG 119 (264)
T ss_dssp CCGGGCEEEEEEECSSSSCEECCCEEEEEECC
T ss_pred CCHHHCEEEEEEEecCCccEecCCEEEEEEcC
Confidence 99999999999999765422233456666654
No 485
>3q0h_A T cell immunoreceptor with IG and ITIM domains; immune receptor, adhesion, structural genomics, NEW YORK STR genomics research consortium, nysgrc; 1.70A {Homo sapiens} PDB: 3rq3_A 3udw_A* 3ucr_A
Probab=98.58 E-value=1.9e-07 Score=52.76 Aligned_cols=50 Identities=22% Similarity=0.263 Sum_probs=38.0
Q ss_pred CCceEEeC-CeEEEcCCCCCCCeEEEEEecc-CCcceeEEEEEEEecCceEE
Q psy11131 9 GPRTRVLG-PILAIEGVTAEDSGTYRCSSSN-IGGEATAEVRLQVSTPYRVD 58 (150)
Q Consensus 9 ~~~~~~~~-~~l~i~~~~~~d~G~Y~C~~~~-~~~~~~~~~~l~v~~~~~~~ 58 (150)
..|+.+.. .+|.|.+++.+|+|.|+|.+.. ..|.....+.|.|..+|...
T Consensus 62 ~~R~~~~~~~sL~I~~v~~~D~G~Y~C~v~~~~~g~~~~~~~L~V~~pp~~~ 113 (117)
T 3q0h_A 62 KDRVAPGPGLGLTLQSLTVNDTGEYFCIYHTYPDGTYTGRIFLEVLESSVAE 113 (117)
T ss_dssp TTTEEECSTTCEEECSCCGGGCEEEEEEEEEETTCCEEEEEEEEEECC----
T ss_pred cCcEEeCCceEEEEeeCChhhCEEEEEEEEECCCCCeEEEEEEEEEccCccc
Confidence 35776644 7899999999999999998754 55777888999999876543
No 486
>2d9q_B Granulocyte colony-stimulating factor receptor; cytokine, ligand-receptor complex, signaling protein-cytokin; HET: NAG; 2.80A {Homo sapiens} SCOP: b.1.1.3 b.1.2.1 b.1.2.1
Probab=98.58 E-value=1.2e-07 Score=62.33 Aligned_cols=78 Identities=15% Similarity=0.152 Sum_probs=58.2
Q ss_pred cEEEecCCcEEEEEEec-C-----CCCCCcEEEEeecCcccCCCcc--------eeeEEEccCCCCCCceEEEEEEeCCC
Q psy11131 63 LLSVHLDGSANFQCEIT-P-----YDSGPYLIAWFKDGRQIPGRTS--------STSLVINPVGREDRGIYQCIARRSDG 128 (150)
Q Consensus 63 ~~~~~~g~~~~l~C~~~-~-----p~~~~~~~~w~~~~~~~~~~~~--------~~~l~~~~~~~~~~g~y~C~~~~~~g 128 (150)
...+..|+.+.|.|.+. . | .+.+.|.+++..+..... .+.|.|.++...|.|.|.|.+.+..+
T Consensus 9 ~~~v~~G~~v~l~C~~~~~~~~~~~---~~~i~W~~~g~~l~~~~~~~~~~~~~~~~L~i~~~~~~d~g~y~c~~~~~~~ 85 (313)
T 2d9q_B 9 APIVHLGDPITASCIIKQNCSHLDP---EPQILWRLGAELQPGGRQQRLSDGTQESIITLPHLNHTQAFLSCSLNWGNSL 85 (313)
T ss_dssp CSEECTTCCEEEEECCCTTSCSSCS---CSCCEEESSSCBCTTCEECCCSSSCCCEEEEESCCCSSEEEEEEEEESSSSE
T ss_pred CcEEcCCCCEEEEEEECCCCCCCCc---ccceEEEeCCEECCccceEEEecCeEEEEEEEeccCCCccceEEeeecCCCc
Confidence 34578999999999998 6 4 688999998877643210 16799999999999999998865433
Q ss_pred CceeeeEEEEEcCcCc
Q psy11131 129 DVAQGSAELQLGGTRN 144 (150)
Q Consensus 129 ~~~~~~~~l~v~~~p~ 144 (150)
.....+.|.+..+|.
T Consensus 86 -~~~~~~~l~v~~~P~ 100 (313)
T 2d9q_B 86 -QILDQVELRAGYPPA 100 (313)
T ss_dssp -EEEEEEEEEECCCCC
T ss_pred -eeEEEEEEccCCCCC
Confidence 344567777776654
No 487
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=98.57 E-value=1.4e-07 Score=52.35 Aligned_cols=47 Identities=28% Similarity=0.423 Sum_probs=38.4
Q ss_pred cCCCCceEEeC----CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEe
Q psy11131 6 VLPGPRTRVLG----PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVS 52 (150)
Q Consensus 6 ~~~~~~~~~~~----~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~ 52 (150)
+..+.++.+.. ..|.|.++..+|+|.|+|.+.|..|.....+.|.|.
T Consensus 55 l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~V~ 105 (106)
T 1nct_A 55 LSTSARHQVTTTKYKSTFEISSVQASDEGNYSVVVENSEGKQEAEFTLTIQ 105 (106)
T ss_dssp CTTCSSEEEEECSSEEEEEECCCCSSCCSEEEECCBCSSCBCCEEEEEEEC
T ss_pred CCCCCCEEEEECCCEEEEEECcCCchhCEEEEEEEEeCCCeEEEEEEEEEE
Confidence 33455665543 689999999999999999999999988888888875
No 488
>2or7_A T-cell immunoglobulin and mucin domain- containing protein 2; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 1.50A {Mus musculus}
Probab=98.57 E-value=3.1e-07 Score=51.59 Aligned_cols=81 Identities=12% Similarity=0.138 Sum_probs=54.4
Q ss_pred CCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCc-------c--------cC--CCcc----------eeeEEEccCC
Q psy11131 61 PPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGR-------Q--------IP--GRTS----------STSLVINPVG 112 (150)
Q Consensus 61 ~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~-------~--------~~--~~~~----------~~~l~~~~~~ 112 (150)
+..+.+.+|+.+.|.|... .... ...+.|++... . .. ...+ ...|.|.++.
T Consensus 4 p~~v~~~~G~~v~L~C~~~~~~~~-~~~v~W~~~~~~~~~~~~~~i~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~ 82 (115)
T 2or7_A 4 HTAVQGLAGHPVTLPCIYSTHLGG-IVPMCWGLGECRHSYCIRSLIWTNGYTVTHQRNSRYQLKGNISEGNVSLTIENTV 82 (115)
T ss_dssp --CEEEETTSCEEECCBCCHHHHC-SCCEEEEESCHHHHTTTTEEEEECSSSEEEESSTTEECCSCGGGTBCCEEESSCC
T ss_pred ccEEEEEcCCCEEEEEEeecCCCC-CEEEEEECCCCCcCCCceEEEEeCCeEcccccCccEEEecCccCCeEEEEEccCC
Confidence 4557788999999999986 3100 46789987641 0 00 0001 3579999999
Q ss_pred CCCCceEEEEEEeCCCCceeeeEEEEEcCcC
Q psy11131 113 REDRGIYQCIARRSDGDVAQGSAELQLGGTR 143 (150)
Q Consensus 113 ~~~~g~y~C~~~~~~g~~~~~~~~l~v~~~p 143 (150)
.+|+|.|.|.+..... .....+.|.|..++
T Consensus 83 ~~DsG~Y~C~v~~~~~-~~~~~v~L~V~~~~ 112 (115)
T 2or7_A 83 VGDGGPYCCVVEIPGA-FHFVDYMLEVKPEL 112 (115)
T ss_dssp GGGCEEEEEEECCTTS-CEEEEEEEEEESCC
T ss_pred HHHCEEEEEEEECCCc-eeEEEEEEEEcCCC
Confidence 9999999999986544 34666777775543
No 489
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=98.57 E-value=2.2e-07 Score=50.49 Aligned_cols=49 Identities=29% Similarity=0.361 Sum_probs=39.6
Q ss_pred ecCCCCceEEeC--C--eEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEec
Q psy11131 5 LVLPGPRTRVLG--P--ILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVST 53 (150)
Q Consensus 5 ~~~~~~~~~~~~--~--~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~ 53 (150)
++..+.++.+.. + .|.|.+++.+|+|.|+|.+.|..|.....+.|.|.+
T Consensus 42 ~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~ 94 (97)
T 2bk8_A 42 QLENSEKYEITYEDGVAILYVKDITKLDDGTYRCKVVNDYGEDSSYAELFVKG 94 (97)
T ss_dssp ECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEETT
T ss_pred ECcCCCCEEEEEcCCeEEEEEecCChhhCeEEEEEEECCCCeEeEEEEEEEEe
Confidence 344556665532 3 899999999999999999999999888888888874
No 490
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=98.57 E-value=2.6e-07 Score=59.46 Aligned_cols=86 Identities=22% Similarity=0.350 Sum_probs=54.5
Q ss_pred eEEeCCCcEEEecCCcEEEEEEec-CCC--CCCcEEEEeecC--cccC------------CCcc--------eeeEEEcc
Q psy11131 56 RVDVNPPLLSVHLDGSANFQCEIT-PYD--SGPYLIAWFKDG--RQIP------------GRTS--------STSLVINP 110 (150)
Q Consensus 56 ~~~~~~~~~~~~~g~~~~l~C~~~-~p~--~~~~~~~w~~~~--~~~~------------~~~~--------~~~l~~~~ 110 (150)
.+...+....+.+|+.+.|.|.+. .+. ...+.+.|++.. .... ...+ ...|.|.+
T Consensus 17 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~ 96 (268)
T 1x9q_A 17 VMTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFTLKINR 96 (268)
T ss_dssp CEEEECSEECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESS
T ss_pred eEEeeCCeEEecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEEEEECC
Confidence 344455666788999999999988 540 003789998753 2110 0111 34799999
Q ss_pred CCCCCCceEEEEEEeCCCCceeeeEEEEEcC
Q psy11131 111 VGREDRGIYQCIARRSDGDVAQGSAELQLGG 141 (150)
Q Consensus 111 ~~~~~~g~y~C~~~~~~g~~~~~~~~l~v~~ 141 (150)
+..+|+|.|.|.+.+..+........|.|..
T Consensus 97 v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~ 127 (268)
T 1x9q_A 97 VEAEDLGVYFCSQSTHVPWTFGGGTKLEIKS 127 (268)
T ss_dssp CCGGGCEEEEEEECSSSSCEECCCEEEC---
T ss_pred CChhHCEEEEEEEecCCCceEcCCEEEEEcc
Confidence 9999999999999986442222334555544
No 491
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=98.57 E-value=7.3e-07 Score=56.43 Aligned_cols=78 Identities=18% Similarity=0.316 Sum_probs=52.1
Q ss_pred eCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeec--------------CcccCC-----C--------cceeeEEEcc
Q psy11131 59 VNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKD--------------GRQIPG-----R--------TSSTSLVINP 110 (150)
Q Consensus 59 ~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~--------------~~~~~~-----~--------~~~~~l~~~~ 110 (150)
..+....+.+|+.+.|.| .. .+ .+.+.|++. +..... . .....|.|.+
T Consensus 7 ~~p~~v~v~~G~~v~L~C-~~~~~---~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~ 82 (245)
T 4ei6_B 7 QIPSHQIIDMGQMVTLNC-DPVSN---HLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKIQP 82 (245)
T ss_dssp EECSEEEEETTCCEEEEE-ECCTT---CCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEECS
T ss_pred eCCceEEecCCCCEEEEE-EcCCC---CCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEECC
Confidence 345667889999999999 54 77 789999871 100000 0 0134899999
Q ss_pred CCCCCCceEEEEEEeCC---CCceeeeEEEEEc
Q psy11131 111 VGREDRGIYQCIARRSD---GDVAQGSAELQLG 140 (150)
Q Consensus 111 ~~~~~~g~y~C~~~~~~---g~~~~~~~~l~v~ 140 (150)
+..+|+|.|.|.+.+.. .........+.|.
T Consensus 83 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~ 115 (245)
T 4ei6_B 83 TALEDSAVYFCASSFWGAYAEQFFGPGTRLTVL 115 (245)
T ss_dssp CCGGGCEEEEEEEECSSTTCCCEECCCEEEEEE
T ss_pred CCHhHCEEEEEEEccCCCcceEEEcCCcEEEEe
Confidence 99999999999998532 1123334455555
No 492
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=98.57 E-value=2.4e-07 Score=49.21 Aligned_cols=46 Identities=20% Similarity=0.406 Sum_probs=34.8
Q ss_pred ecCCCCceEEeC----CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecC
Q psy11131 5 LVLPGPRTRVLG----PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTP 54 (150)
Q Consensus 5 ~~~~~~~~~~~~----~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~ 54 (150)
++..+.++.+.. ..|.|.++..+|+|.|.|.+.+. +..+.|.|.+|
T Consensus 35 ~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~----~~~a~l~V~eP 84 (84)
T 2lu7_A 35 RLASQGRVQLEQAGARQVLRVQGARSGDAGEYLCDAPQD----SRIFLVSVEEP 84 (84)
T ss_dssp ECCCCSSEEEEECSSCEEEEESSCSSTTCEEEEEECTTT----CEEEEEEECCC
T ss_pred EccccccEEEeecCCeEEEEecCCCCcccEEEEEEECCE----EEEEEEEEECC
Confidence 455666766644 47999999999999999998653 56677777653
No 493
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=98.57 E-value=1.2e-07 Score=51.13 Aligned_cols=36 Identities=25% Similarity=0.295 Sum_probs=32.5
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEe
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVS 52 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~ 52 (150)
..|.|.++..+|+|.|+|.+.|..|.....+.|.|+
T Consensus 58 ~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~V~ 93 (93)
T 1wit_A 58 TSIFFPSAKRADSGNYKLKVKNELGEDEAIFEVIVQ 93 (93)
T ss_dssp EEEECTTBCGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred EEEEECCCChhcCEEEEEEEEcCCCeEEEEEEEEEC
Confidence 579999999999999999999999988888888764
No 494
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.57 E-value=2.2e-07 Score=57.49 Aligned_cols=63 Identities=21% Similarity=0.385 Sum_probs=48.1
Q ss_pred CCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecC--cccC------------CCcc--------eeeEEEccCCCCCCc
Q psy11131 61 PPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDG--RQIP------------GRTS--------STSLVINPVGREDRG 117 (150)
Q Consensus 61 ~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~--~~~~------------~~~~--------~~~l~~~~~~~~~~g 117 (150)
|....+.+|+.+.|.|.+. .| .+.+.|+++. ..+. ...+ ...|.|.++..+|+|
T Consensus 6 p~~~~v~~G~~v~L~C~~~~~~---~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 82 (212)
T 1nfd_E 6 PSSASVTVGETVKITCSGDQLP---KNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDEA 82 (212)
T ss_dssp CSEEEEETTSCCCEEEEETTGG---GSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGCS
T ss_pred CCeEEEeCCCcEEEEEecCCCC---CCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccCE
Confidence 5667889999999999987 77 6789998743 2210 0111 347999999999999
Q ss_pred eEEEEEEeC
Q psy11131 118 IYQCIARRS 126 (150)
Q Consensus 118 ~y~C~~~~~ 126 (150)
.|.|.+.|.
T Consensus 83 ~Y~C~~~n~ 91 (212)
T 1nfd_E 83 AYYCLSSYG 91 (212)
T ss_dssp EEEEEEEET
T ss_pred EEEEEEEcc
Confidence 999999973
No 495
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=98.57 E-value=2e-07 Score=50.68 Aligned_cols=48 Identities=23% Similarity=0.479 Sum_probs=38.7
Q ss_pred cCCCCceEEeC----CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEec
Q psy11131 6 VLPGPRTRVLG----PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVST 53 (150)
Q Consensus 6 ~~~~~~~~~~~----~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~ 53 (150)
+..+.++.+.. ..|.|.++..+|+|.|+|.+.|..|.....+.|.|.+
T Consensus 47 ~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 98 (99)
T 3puc_A 47 ITQGGKYKLSEDKGGFFLEIHKTDTSDSGLYTCTVKNSAGSVSSSCKLTIKA 98 (99)
T ss_dssp CCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CcCCCCEEEEEeCCEEEEEECCCCcccCEEEEEEEEeCCCcEeEEEEEEEEe
Confidence 34455665544 2799999999999999999999989888888888763
No 496
>2jju_A Signal regulatory protein beta-1; immunoglobulin domain, immunoglobulin superfamily, immune system, transmembrane, paired receptor; 1.19A {Homo sapiens} PDB: 2jjv_A 2uv3_A* 2jjt_A* 2jjs_A* 2jjw_A
Probab=98.56 E-value=4e-07 Score=52.16 Aligned_cols=65 Identities=26% Similarity=0.388 Sum_probs=48.8
Q ss_pred eCCCcEEEecCCcEEEEEEec-C-CCCCCcEEEEeecCcc----cC-C-C----------------cceeeEEEccCCCC
Q psy11131 59 VNPPLLSVHLDGSANFQCEIT-P-YDSGPYLIAWFKDGRQ----IP-G-R----------------TSSTSLVINPVGRE 114 (150)
Q Consensus 59 ~~~~~~~~~~g~~~~l~C~~~-~-p~~~~~~~~w~~~~~~----~~-~-~----------------~~~~~l~~~~~~~~ 114 (150)
..+....+.+|+.+.|.|... . + .+.+.|++.... +. . . .....|.|.++..+
T Consensus 8 q~p~~~~v~~G~~vtL~C~~~~~~~---~~~v~W~r~~~~~~~li~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~ 84 (127)
T 2jju_A 8 QPEKSVSVAAGESATLRCAMTSLIP---VGPIMWFRGAGAGRELIYNQKEGHFPRVTTVSELTKRNNLDFSISISNITPA 84 (127)
T ss_dssp CCCSEEEEETTSCEEECCEESCCCS---CCCEEEEECSSTTCEEEEESSSSCCTTEEEC-------CCBCCEEECSCCGG
T ss_pred eeCCeEEEeCCCCEEEEEEEeCCCC---CCEEEEEecCCCCcEEEEECCCCccCcEEeeEeeeecCCCEEEEEECCCCHH
Confidence 345667889999999999997 4 5 678999986421 10 0 0 01357999999999
Q ss_pred CCceEEEEEEeC
Q psy11131 115 DRGIYQCIARRS 126 (150)
Q Consensus 115 ~~g~y~C~~~~~ 126 (150)
|+|.|.|.+.+.
T Consensus 85 DsG~Y~C~~~~~ 96 (127)
T 2jju_A 85 DAGTYYCVKFRK 96 (127)
T ss_dssp GCEEEEEEEEEC
T ss_pred HCEEEEEEEEcC
Confidence 999999999875
No 497
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=98.56 E-value=2.4e-07 Score=50.41 Aligned_cols=39 Identities=33% Similarity=0.513 Sum_probs=34.2
Q ss_pred EeCCeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEe
Q psy11131 14 VLGPILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVS 52 (150)
Q Consensus 14 ~~~~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~ 52 (150)
...++|.|.+++.+|+|.|+|.+.|..|.....+.|.|.
T Consensus 59 ~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~ 97 (98)
T 1gl4_B 59 DFNGILTIRNVQPSDAGTYVCTGSNMFAMDQGTATLHVQ 97 (98)
T ss_dssp EETTEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred cCCCEEEEeCCChhhCEEEEEEecCCCCccccEEEEEEe
Confidence 344789999999999999999999998888888888775
No 498
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.56 E-value=1.4e-07 Score=53.22 Aligned_cols=39 Identities=23% Similarity=0.308 Sum_probs=35.0
Q ss_pred CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCc
Q psy11131 17 PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPY 55 (150)
Q Consensus 17 ~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~ 55 (150)
..|.|.++..+|+|.|+|.+.|..|.....+.|.|.++|
T Consensus 79 ~~L~i~~~~~~D~G~Y~C~a~N~~G~~~~~~~l~V~~~P 117 (118)
T 2e7c_A 79 TVFFVRQAARSDSGEYELSVQIENMKDTATIRIRVVEKA 117 (118)
T ss_dssp EEEEESSCCTTTCEEEEEEEECSSCEECCEEEEEEECCC
T ss_pred EEEEECCCChhcCEEEEEEEEeCCCeEEEEEEEEEEcCC
Confidence 459999999999999999999999988888999988754
No 499
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=98.55 E-value=8.7e-07 Score=56.60 Aligned_cols=82 Identities=18% Similarity=0.246 Sum_probs=57.1
Q ss_pred EEeCCCcEEEecCCcEEEEEEec-CCCCCCcEEEEeecCc--ccC-----------------------CCcceeeEEEcc
Q psy11131 57 VDVNPPLLSVHLDGSANFQCEIT-PYDSGPYLIAWFKDGR--QIP-----------------------GRTSSTSLVINP 110 (150)
Q Consensus 57 ~~~~~~~~~~~~g~~~~l~C~~~-~p~~~~~~~~w~~~~~--~~~-----------------------~~~~~~~l~~~~ 110 (150)
+...+....+.+|+.+.|.|.+. .| .+.+.|++... ... .......|.|.+
T Consensus 6 v~q~p~~~~v~~G~~v~L~C~~~~~~---~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~ 82 (256)
T 3tf7_C 6 VTQPDARVTVSEGASLQLRCKYSYSA---TPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKAS 82 (256)
T ss_dssp EECSCSEEEEETTSCEEECCEEECSS---CCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESS
T ss_pred EEecCceEEecCCCeEEEEEEeCCCC---CceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECC
Confidence 34456677889999999999998 88 89999987321 100 000134699999
Q ss_pred CCCCCCceEEEEEEeCCCC---ceeeeEEEEEcC
Q psy11131 111 VGREDRGIYQCIARRSDGD---VAQGSAELQLGG 141 (150)
Q Consensus 111 ~~~~~~g~y~C~~~~~~g~---~~~~~~~l~v~~ 141 (150)
+..+|+|.|.|.+.+..+. .......|.|..
T Consensus 83 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~ 116 (256)
T 3tf7_C 83 VHRSDSAVYFCAVSAKGTGSKLSFGKGAKLTVSP 116 (256)
T ss_dssp CCGGGCSEEEEEEECTTCTTCEEECCCEEEEEEC
T ss_pred CCcccCEEEEEEEecCCCccceEECCCeEEEEeC
Confidence 9999999999999986541 122234555554
No 500
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=98.55 E-value=2.2e-07 Score=52.92 Aligned_cols=48 Identities=23% Similarity=0.403 Sum_probs=39.0
Q ss_pred CCCceEEeC-----CeEEEcCCCCCCCeEEEEEeccCCcceeEEEEEEEecCce
Q psy11131 8 PGPRTRVLG-----PILAIEGVTAEDSGTYRCSSSNIGGEATAEVRLQVSTPYR 56 (150)
Q Consensus 8 ~~~~~~~~~-----~~l~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~v~~~~~ 56 (150)
.+.|+.+.. .+|.|.+++.+|+|.|+|.+.+. +.....+.|.|..+|.
T Consensus 52 ~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~-g~~~~~~~l~V~~~P~ 104 (124)
T 3rbg_A 52 KNSKYQLLHHSANQLSITVPNVTLQDEGVYKCLHYSD-SVSTKEVKVIVLATMK 104 (124)
T ss_dssp CSSCCEEEEEETTEEEEEESSCCGGGCEEEEEEEESS-SEEEEEEEEEEECC--
T ss_pred cCCcEEEEeCCCCEEEEEECCCChHHCEEEEEEEEcC-CCCcEEEEEEEEeCCC
Confidence 455666542 68999999999999999999998 8888889999987764
Done!